Euteleostomi	ANCESTRAL SPECIES	388											ENSGT00940000179440	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28
Sarcopterygii	ANCESTRAL SPECIES	118	ENSGT00390000007753.a	ENSGT00940000155704	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00940000179440	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28
Tetrapoda	ANCESTRAL SPECIES	129											ENSGT00940000179440	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT00950000182886.b.a
Amniota	ANCESTRAL SPECIES	1	ENSGT01030000235112	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Mammalia	ANCESTRAL SPECIES	2	ENSGT01030000235112	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Theria	ANCESTRAL SPECIES	12	ENSGT01030000235112	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Eutheria	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00660000097201	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Glires	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Rodentia	ANCESTRAL SPECIES		ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00660000097201	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Sciuridae	ANCESTRAL SPECIES		ENSGT00530000063808.b	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747.h #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.i #28	ENSGT00940000156546 #29	ENSGT00940000160590.l #30	ENSGT00940000160590.k ##30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Marmotini	ANCESTRAL SPECIES	21	ENSGT00530000063808.b	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747.h #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT01030000235784 #23	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158.i #28	ENSGT00940000156546 #29	ENSGT00940000160590.k ##30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Marmotini_b	ANCESTRAL SPECIES	84		ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747.h #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT01030000235784 #23	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158.i #28	ENSGT00940000156546 #29	ENSGT00940000160590.k ##30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Arctic ground squirrel	MODERN SPECIES	79	GREM2 (ENSUPAG00010018995) #7	RGS7 (ENSUPAG00010018948) #8	FH (ENSUPAG00010018928) #9	KMO (ENSUPAG00010018908) #10	OPN3 (ENSUPAG00010018902) #11	WDR64 (ENSUPAG00010018776) #12	ENSUPAG00010018764 #13	EXO1 (ENSUPAG00010018752) #14	ENSUPAG00010018744 #15	BECN2 (ENSUPAG00010018741) #16	MAP1LC3C (ENSUPAG00010018734) #17	PLD5 (ENSUPAG00010018694) #18	CEP170 (ENSUPAG00010018567) #19	SDCCAG8 (ENSUPAG00010018478) #20	AKT3 (ENSUPAG00010018428) #21	ZBTB18 (ENSUPAG00010018400) #22	ENSUPAG00010018394 #23	C1orf100 (ENSUPAG00010018380) #24	ADSS2 (ENSUPAG00010018358) #25	ENSUPAG00010018323 #26	DESI2 (ENSUPAG00010018313) #27	ENSUPAG00010018307 #28	HNRNPU (ENSUPAG00010018254) #29	EFCAB2 (ENSUPAG00010018238) #30	KIF26B (ENSUPAG00010018207) #31	SMYD3 (ENSUPAG00010018170) #32	ENSUPAG00010018160 #33	CNST (ENSUPAG00010018148) #34	SCCPDH (ENSUPAG00010018131) #35
Squirrel	MODERN SPECIES	126		FMN2 (ENSSTOG00000025339)	GREM2 (ENSSTOG00000007628) #7	RGS7 (ENSSTOG00000006862) #8	FH (ENSSTOG00000012681) #9	KMO (ENSSTOG00000012690) #10	OPN3 (ENSSTOG00000012707) #11	ENSSTOG00000012715 #12	BECN2 (ENSSTOG00000027748) #16	MAP1LC3C (ENSSTOG00000010423) #15	PLD5 (ENSSTOG00000031877) #18	CEP170 (ENSSTOG00000008203) #19	SDCCAG8 (ENSSTOG00000010585) #20	ENSSTOG00000030430	AKT3 (ENSSTOG00000010595) #21	ZBTB18 (ENSSTOG00000004290) #22	C1orf100 (ENSSTOG00000022394) #24	ADSS2 (ENSSTOG00000004376) #25	DESI2 (ENSSTOG00000004752) #27	COX20 (ENSSTOG00000000151) #28	ENSSTOG00000000153 #29	ENSSTOG00000031476 ##30	KIF26B (ENSSTOG00000028101) #31	SMYD3 (ENSSTOG00000028065) #32	TFB2M (ENSSTOG00000034162) #33	CNST (ENSSTOG00000000432) #34	ENSSTOG00000025585	SCCPDH (ENSSTOG00000007502) #35	ENSSTOG00000021998	AHCTF1 (ENSSTOG00000010795)	CDC42BPA (ENSSTOG00000015415)
Alpin marmot	MODERN SPECIES	12	FMN2 (ENSMMMG00000023630)	GREM2 (ENSMMMG00000023631) #7	RGS7 (ENSMMMG00000023632) #8	FH (ENSMMMG00000023640) #9	KMO (ENSMMMG00000023641) #10	OPN3 (ENSMMMG00000023648) #11	WDR64 (ENSMMMG00000023654) #12	EXO1 (ENSMMMG00000023668) #14	ENSMMMG00000023670 #15	BECN2 (ENSMMMG00000023671) #16	MAP1LC3C (ENSMMMG00000023673) #15	PLD5 (ENSMMMG00000023675) #18	CEP170 (ENSMMMG00000023685) #19	SDCCAG8 (ENSMMMG00000023689) #20	AKT3 (ENSMMMG00000023693) #21	ENSMMMG00000023698 #22	ENSMMMG00000023703 #23	C1orf100 (ENSMMMG00000023704) #24	ADSS2 (ENSMMMG00000023707) #25	ENSMMMG00000023709 #26	DESI2 (ENSMMMG00000023711) #27	COX20 (ENSMMMG00000023713) #28	HNRNPU (ENSMMMG00000023721) #29	EFCAB2 (ENSMMMG00000024005) ##30	KIF26B (ENSMMMG00000024009) #31	SMYD3 (ENSMMMG00000024012) #32	TFB2M (ENSMMMG00000024017) #33	CNST (ENSMMMG00000024021) #34	SCCPDH (ENSMMMG00000024025) #35	ENSMMMG00000024026	ENSMMMG00000024027
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	3	ENSSVLG00005020174	RGS7 (ENSSVLG00005020300) #8	FH (ENSSVLG00005020886) #9	KMO (ENSSVLG00005021004) #10	OPN3 (ENSSVLG00005021384) #11	WDR64 (ENSSVLG00005021468) #12	EXO1 (ENSSVLG00005021837) #14	ENSSVLG00005022002 #15	BECN2 (ENSSVLG00005022043) #16	MAP1LC3C (ENSSVLG00005022067) #15	PLD5 (ENSSVLG00005022151) #18	ENSSVLG00005022301	CEP170 (ENSSVLG00005022337) #19	SDCCAG8 (ENSSVLG00005022441) #20	AKT3 (ENSSVLG00005022494) #21	ZBTB18 (ENSSVLG00005022559) #22	C1orf100 (ENSSVLG00005022598) #24	ENSSVLG00005022682 #25	CATSPERE (ENSSVLG00005022809) #26	DESI2 (ENSSVLG00005023102) #27	ENSSVLG00005023149	ENSSVLG00005023185 #28	HNRNPU (ENSSVLG00005023262) #29	ENSSVLG00005023557 #30	KIF26B (ENSSVLG00005023636) #31	ENSSVLG00005023779	ENSSVLG00005023802	SMYD3 (ENSSVLG00005023822) #32	TFB2M (ENSSVLG00005023868) #33	ENSSVLG00005023906	ENSSVLG00005009011 #34
Eurasian red squirrel	MODERN SPECIES	113															ENSSVLG00005016262	ENSSVLG00005016172 #22
Hystricomorpha	ANCESTRAL SPECIES	49	ENSGT00940000156376	ENSGT00940000162504	ENSGT00390000017528	ENSGT01030000234620.a.b.b.b	ENSGT00530000064210	ENSGT00390000011724	ENSGT00950000182836.b.a.b	ENSGT00940000156989	ENSGT00960000186787	ENSGT00940000156484.b	ENSGT00940000157923	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Naked mole-rat female	MODERN SPECIES	16	ENSHGLG00000028910	ENSHGLG00000037874	ENSHGLG00000005464	ENSHGLG00000032112	MAP1LC3C (ENSHGLG00000037027) #15	ENSHGLG00000004656 #18	ENSHGLG00000040176	ENSHGLG00000006833	ENSHGLG00000043505	ENSHGLG00000011191	ENSHGLG00000006465 #19	ENSHGLG00000038674 #19	ENSHGLG00000004271 #20	AKT3 (ENSHGLG00000006424) #21	ENSHGLG00000043051	ZBTB18 (ENSHGLG00000003880) #22	ADSS (ENSHGLG00000007672) #25	ENSHGLG00000009917 #24	ENSHGLG00000041745 #26	ENSHGLG00000035202 #27	ENSHGLG00000015935	ENSHGLG00000043796	COX20 (ENSHGLG00000015836) #28	ENSHGLG00000010594 #29	ENSHGLG00000042794	ENSHGLG00000034325 #30	ENSHGLG00000015928 #31	ENSHGLG00000044814	ENSHGLG00000020542	ENSHGLG00000040776	ENSHGLG00000015190 #32
Hystricomorpha_a	ANCESTRAL SPECIES	13	ENSGT00940000162770	ENSGT00940000156376	ENSGT00940000162504	ENSGT00390000017528	ENSGT01030000234620.a.b.b.b	ENSGT00530000064210	ENSGT00390000011724	ENSGT00950000182836.b.a.b	ENSGT00940000156989	ENSGT00940000156484.b	ENSGT00940000157923	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Guinea pig	MODERN SPECIES	13	ENSCPOG00000033847	PACC1 (ENSCPOG00000009329)	PPP2R5A (ENSCPOG00000040049)	DTL (ENSCPOG00000014965)	INTS7 (ENSCPOG00000014960)	LPGAT1 (ENSCPOG00000011269)	NEK2 (ENSCPOG00000011264)	SLC30A1 (ENSCPOG00000013692)	PSEN2 (ENSCPOG00000001827)	PLD5 (ENSCPOG00000033411) #18	ENSCPOG00000002221	ENSCPOG00000002683 #19	ENSCPOG00000034860 #19	SDCCAG8 (ENSCPOG00000015503) #20	AKT3 (ENSCPOG00000015504) #21	ZBTB18 (ENSCPOG00000035384) #22	C1orf100 (ENSCPOG00000002339) #24	ADSS2 (ENSCPOG00000002342) #25	DESI2 (ENSCPOG00000002091) #27	COX20 (ENSCPOG00000032295) #28	HNRNPU (ENSCPOG00000011887) #29	EFCAB2 (ENSCPOG00000024335) #30	KIF26B (ENSCPOG00000001048) #31	SMYD3 (ENSCPOG00000002655) #32	ENSCPOG00000013225 #33	CNST (ENSCPOG00000012012) #34	SCCPDH (ENSCPOG00000029999) #35	ENSCPOG00000036159	AHCTF1 (ENSCPOG00000009216)	CDC42BPA (ENSCPOG00000011457)	COQ8A (ENSCPOG00000011445)
Hystricomorpha_b	ANCESTRAL SPECIES	4	ENSGT00940000156376	ENSGT00940000162504	ENSGT00390000017528	ENSGT01030000234620.a.b.b.b	ENSGT00530000064210	ENSGT00390000011724	ENSGT00950000182836.b.a.b	ENSGT00940000156989	ENSGT00940000156484.b	ENSGT00940000157923	ENSGT00950000183059.b.a.b #18	ENSGT00660000097201	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Long-tailed chinchilla	MODERN SPECIES	113	ATF3 (ENSCLAG00000013767)	ENSCLAG00000007912	PACC1 (ENSCLAG00000009570)	PPP2R5A (ENSCLAG00000012816)	DTL (ENSCLAG00000014236)	INTS7 (ENSCLAG00000011748)	LPGAT1 (ENSCLAG00000011509)	NEK2 (ENSCLAG00000010880)	SLC30A1 (ENSCLAG00000009695)	PSEN2 (ENSCLAG00000013788)	PLD5 (ENSCLAG00000014400) #18	ENSCLAG00000010377	CEP170 (ENSCLAG00000015564) #19	SDCCAG8 (ENSCLAG00000011676) #20	ENSCLAG00000009649 #21	ZBTB18 (ENSCLAG00000015788) #22	C1orf100 (ENSCLAG00000007599) #24	ADSS2 (ENSCLAG00000008748) #25	CATSPERE (ENSCLAG00000009169) #26	DESI2 (ENSCLAG00000011829) #27	HNRNPU (ENSCLAG00000007100) #29	ENSCLAG00000007770 #28	EFCAB2 (ENSCLAG00000008343) #30	KIF26B (ENSCLAG00000012108) #31	SMYD3 (ENSCLAG00000010031) #32	TFB2M (ENSCLAG00000008614) #33	CNST (ENSCLAG00000008046) #34	SCCPDH (ENSCLAG00000009869) #35	ENSCLAG00000014434	AHCTF1 (ENSCLAG00000007804)	CDC42BPA (ENSCLAG00000012875)
Degu	MODERN SPECIES	58	INTS7 (ENSODEG00000013809)	LPGAT1 (ENSODEG00000013429)	ENSODEG00000014021	ENSODEG00000013939	SLC30A1 (ENSODEG00000014581)	PSEN2 (ENSODEG00000013898)	PLD5 (ENSODEG00000013817) #18	ENSODEG00000014152	ENSODEG00000014979	ENSODEG00000013620 #19	ENSODEG00000016144 #19	ENSODEG00000014847 #19	SDCCAG8 (ENSODEG00000013437) #20	ENSODEG00000013767	AKT3 (ENSODEG00000013255) #21	ZBTB18 (ENSODEG00000014080) #22	C1orf100 (ENSODEG00000012902) #24	ADSS2 (ENSODEG00000015411) #25	ENSODEG00000013295 #27	ENSODEG00000013410	ENSODEG00000013336 #28	ENSODEG00000014458 #29	ENSODEG00000014016	ENSODEG00000014131	EFCAB2 (ENSODEG00000013516) #30	KIF26B (ENSODEG00000013218) #31	SMYD3 (ENSODEG00000012912) #32	ENSODEG00000013735 #33	ENSODEG00000020123	CNST (ENSODEG00000013290) #34	SCCPDH (ENSODEG00000013300) #35
Rodentia_B	ANCESTRAL SPECIES	45	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00660000097201	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Kangaroo rat	MODERN SPECIES	354	ENSDORG00000024261	Zbtb41 (ENSDORG00000001433)	Aspm (ENSDORG00000001415)	F13b (ENSDORG00000001410)	ENSDORG00000008157	Kcnt2 (ENSDORG00000008155)	B3galt2 (ENSDORG00000023725)	Cdc73 (ENSDORG00000000552)	ENSDORG00000006154	Ro60 (ENSDORG00000006152)	Uchl5 (ENSDORG00000013932)	Cep170 (ENSDORG00000029922) #19	ENSDORG00000029309	Sdccag8 (ENSDORG00000000842) #20	Akt3 (ENSDORG00000004303) #21	ENSDORG00000029972 #22	1700016C15Rik (ENSDORG00000010973) #24	Adss (ENSDORG00000010974) #25	Desi2 (ENSDORG00000002787) #27	Cox20 (ENSDORG00000023905) #28	Hnrnpu (ENSDORG00000015491) #29	Efcab2 (ENSDORG00000027552) #30	Kif26b (ENSDORG00000027986) #31	Smyd3 (ENSDORG00000001030) #32	Tfb2m (ENSDORG00000026012) #33	ENSDORG00000009570 #34	Sccpdh (ENSDORG00000005002) #35	Ahctf1 (ENSDORG00000001298)	Cdc42bpa (ENSDORG00000010002)	Coq8a (ENSDORG00000010000)	Psen2 (ENSDORG00000001758)
Myomorpha	ANCESTRAL SPECIES	16	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00660000097201	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Lesser Egyptian jerboa	MODERN SPECIES	51	ENSJJAG00000020804	Stau2 (ENSJJAG00000020228)	Ube2w (ENSJJAG00000005058)	ENSJJAG00000018468	Grem2 (ENSJJAG00000010680) #7	Rgs7 (ENSJJAG00000011876) #8	Fh1 (ENSJJAG00000004989) #9	Kmo (ENSJJAG00000018020) #10	Opn3 (ENSJJAG00000020588) #11	Wdr64 (ENSJJAG00000016288) #12	Pld5 (ENSJJAG00000011744) #18	ENSJJAG00000022798	Cep170 (ENSJJAG00000014809) #19	Sdccag8 (ENSJJAG00000021886) #20	Akt3 (ENSJJAG00000010899) #21	Zbtb18 (ENSJJAG00000021234) #22	1700016C15Rik (ENSJJAG00000024007) #24	Adss (ENSJJAG00000021726) #25	ENSJJAG00000024194 #27	ENSJJAG00000019395 #28	Hnrnpu (ENSJJAG00000011371) #29	Efcab2 (ENSJJAG00000001490) #30	Kif26b (ENSJJAG00000021322) #31	Smyd3 (ENSJJAG00000024434) #32	Tfb2m (ENSJJAG00000019285) #33	Cnst (ENSJJAG00000019924) #34	Sccpdh (ENSJJAG00000016528) #35	Kif28 (ENSJJAG00000009428)	Ahctf1 (ENSJJAG00000015815)	Cdc42bpa (ENSJJAG00000010408)	Coq8a (ENSJJAG00000001225)
Muroidea	ANCESTRAL SPECIES	9	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	1473					Fh1 (ENSNGAG00000013874) #9	Kmo (ENSNGAG00000017177) #10	Opn3 (ENSNGAG00000013479) #11	Wdr64 (ENSNGAG00000002915) #12	ENSNGAG00000018547 #14	Becn2 (ENSNGAG00000015212) #16	Pld5 (ENSNGAG00000020901) #18	ENSNGAG00000014315	Cep170 (ENSNGAG00000019300) #19	Sdccag8 (ENSNGAG00000015552) #20	Akt3 (ENSNGAG00000013336) #21	Zbtb18 (ENSNGAG00000008361) #22	ENSNGAG00000006928	Adss (ENSNGAG00000003132) #25	ENSNGAG00000000401	Desi2 (ENSNGAG00000017919) #27	Cox20 (ENSNGAG00000002776) #28	Hnrnpu (ENSNGAG00000019075) #29	Efcab2 (ENSNGAG00000017119) #30	ENSNGAG00000013762 #31	Smyd3 (ENSNGAG00000014029) #32	ENSNGAG00000005247	Tfb2m (ENSNGAG00000018240) #33	Cnst (ENSNGAG00000001157) #34	Sccpdh (ENSNGAG00000018881) #35	Kif28 (ENSNGAG00000013723)	Ahctf1 (ENSNGAG00000001983)
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Murinae	ANCESTRAL SPECIES	11	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546.c #29	ENSGT01050000248390	ENSGT00940000156546.d #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Mus	ANCESTRAL SPECIES	5	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546.c #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00730000111185.n.b	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546.c #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT00860000135936
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00730000111185.n.b	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546.c #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT00860000135936
Mouse	MODERN SPECIES		Fmn2 (ENSMUSG00000028354)	Grem2 (ENSMUSG00000050069) #7	Rgs7 (ENSMUSG00000026527) #8	Fh1 (ENSMUSG00000026526) #9	Kmo (ENSMUSG00000039783) #10	Opn3 (ENSMUSG00000026525) #11	Chml (ENSMUSG00000078185)	Wdr64 (ENSMUSG00000026523) #12	Exo1 (ENSMUSG00000039748) #14	Becn2 (ENSMUSG00000104158) #16	Pld5 (ENSMUSG00000055214) #18	Rbm8a2 (ENSMUSG00000078184)	Cep170 (ENSMUSG00000057335) #19	Sdccag8 (ENSMUSG00000026504) #20	Akt3 (ENSMUSG00000019699) #21	Zbtb18 (ENSMUSG00000063659) #22	1700016C15Rik (ENSMUSG00000015962) #24	Adss (ENSMUSG00000015961) #25	Catspere1 (ENSMUSG00000102483) #26	Catspere2 (ENSMUSG00000091476) #26	Desi2 (ENSMUSG00000026502) #27	Cox20 (ENSMUSG00000026500) #28	Hnrnpu (ENSMUSG00000039630) #29	Efcab2 (ENSMUSG00000026495) #30	Kif26b (ENSMUSG00000026494) #31	Smyd3 (ENSMUSG00000055067) #32	Tfb2m (ENSMUSG00000026492) #33	Cnst (ENSMUSG00000038949) #34	Sccpdh (ENSMUSG00000038936) #35	Kif28 (ENSMUSG00000087236)	Ahctf1 (ENSMUSG00000026491)
Mus_C	ANCESTRAL SPECIES	1	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546.c #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT00860000135936	ENSGT01030000234517.H.b
Steppe mouse	MODERN SPECIES	2903												Cep170 (ENSMSIG00000007906) #19	Sdccag8 (ENSMSIG00000008255) #20	ENSMSIG00000008464	Akt3 (ENSMSIG00000008489) #21	Zbtb18 (ENSMSIG00000008641) #22	1700016C15Rik (ENSMSIG00000008684) #24	Adss (ENSMSIG00000008712) #25
spretus	MODERN SPECIES		Fmn2 (MGP_SPRETEiJ_G0015740)	Grem2 (MGP_SPRETEiJ_G0015741) #7	Rgs7 (MGP_SPRETEiJ_G0015742) #8	Fh1 (MGP_SPRETEiJ_G0015743) #9	Kmo (MGP_SPRETEiJ_G0015744) #10	Opn3 (MGP_SPRETEiJ_G0015745) #11	Chml (MGP_SPRETEiJ_G0015746)	Wdr64 (MGP_SPRETEiJ_G0015747) #12	Exo1 (MGP_SPRETEiJ_G0015748) #14	Becn2 (MGP_SPRETEiJ_G0015749) #16	Pld5 (MGP_SPRETEiJ_G0015750) #18	MGP_SPRETEiJ_G0015751	Cep170 (MGP_SPRETEiJ_G0015752) #19	Sdccag8 (MGP_SPRETEiJ_G0015753) #20	Akt3 (MGP_SPRETEiJ_G0015754) #21	Zbtb18 (MGP_SPRETEiJ_G0015755) #22	1700016C15Rik (MGP_SPRETEiJ_G0015756) #24	Adss (MGP_SPRETEiJ_G0015757) #25	Desi2 (MGP_SPRETEiJ_G0015758) #27	Cox20 (MGP_SPRETEiJ_G0015759) #28	MGP_SPRETEiJ_G0015760 #29	Hnrnpu (MGP_SPRETEiJ_G0015761) #29	Efcab2 (MGP_SPRETEiJ_G0015762) #30	Kif26b (MGP_SPRETEiJ_G0015763) #31	Smyd3 (MGP_SPRETEiJ_G0015764) #32	MGP_SPRETEiJ_G0015765 #33	MGP_SPRETEiJ_G0015766 #33	Cnst (MGP_SPRETEiJ_G0015767) #34	Sccpdh (MGP_SPRETEiJ_G0015768) #35	Kif28 (MGP_SPRETEiJ_G0015769)	Ahctf1 (MGP_SPRETEiJ_G0015770)
Ryukyu mouse	MODERN SPECIES		MGP_CAROLIEiJ_G0014940	Grem2 (MGP_CAROLIEiJ_G0014941) #7	Rgs7 (MGP_CAROLIEiJ_G0014942) #8	Fh1 (MGP_CAROLIEiJ_G0014943) #9	Kmo (MGP_CAROLIEiJ_G0014944) #10	Opn3 (MGP_CAROLIEiJ_G0014945) #11	Chml (MGP_CAROLIEiJ_G0014946)	Wdr64 (MGP_CAROLIEiJ_G0014947) #12	Exo1 (MGP_CAROLIEiJ_G0014948) #14	Becn2 (MGP_CAROLIEiJ_G0014949) #16	Pld5 (MGP_CAROLIEiJ_G0014950) #18	Rbm8a2 (MGP_CAROLIEiJ_G0014951)	Cep170 (MGP_CAROLIEiJ_G0014952) #19	Sdccag8 (MGP_CAROLIEiJ_G0014953) #20	Akt3 (MGP_CAROLIEiJ_G0014954) #21	Zbtb18 (MGP_CAROLIEiJ_G0014955) #22	1700016C15Rik (MGP_CAROLIEiJ_G0014956) #24	Adss (MGP_CAROLIEiJ_G0014957) #25	MGP_CAROLIEiJ_G0014958	Desi2 (MGP_CAROLIEiJ_G0014959) #27	Cox20 (MGP_CAROLIEiJ_G0014960) #28	MGP_CAROLIEiJ_G0014961 #29	Hnrnpu (MGP_CAROLIEiJ_G0014962) #29	Efcab2 (MGP_CAROLIEiJ_G0014963) #30	Kif26b (MGP_CAROLIEiJ_G0014964) #31	Smyd3 (MGP_CAROLIEiJ_G0014965) #32	MGP_CAROLIEiJ_G0014966 #33	MGP_CAROLIEiJ_G0014967 #33	Cnst (MGP_CAROLIEiJ_G0014968) #34	Sccpdh (MGP_CAROLIEiJ_G0014969) #35	Kif28 (MGP_CAROLIEiJ_G0014970)
Shrew mouse	MODERN SPECIES	18	Or6y1 (MGP_PahariEiJ_G0028172)	MGP_PahariEiJ_G0028173	Grem2 (MGP_PahariEiJ_G0028174) #7	Rgs7 (MGP_PahariEiJ_G0028175) #8	Fh1 (MGP_PahariEiJ_G0028176) #9	Kmo (MGP_PahariEiJ_G0028177) #10	Opn3 (MGP_PahariEiJ_G0028178) #11	Chml (MGP_PahariEiJ_G0028179)	Wdr64 (MGP_PahariEiJ_G0028180) #12	Exo1 (MGP_PahariEiJ_G0028181) #14	Becn2 (MGP_PahariEiJ_G0028182) #16	Pld5 (MGP_PahariEiJ_G0028183) #18	Cep170 (MGP_PahariEiJ_G0028184) #19	Sdccag8 (MGP_PahariEiJ_G0028185) #20	Akt3 (MGP_PahariEiJ_G0028186) #21	Zbtb18 (MGP_PahariEiJ_G0028187) #22	1700016C15Rik (MGP_PahariEiJ_G0028188) #24	Adss (MGP_PahariEiJ_G0028189) #25	MGP_PahariEiJ_G0028190 #27	Cox20 (MGP_PahariEiJ_G0028191) #28	MGP_PahariEiJ_G0028192 #29	Hnrnpu (MGP_PahariEiJ_G0028193) #29	Efcab2 (MGP_PahariEiJ_G0028194) #30	Kif26b (MGP_PahariEiJ_G0028195) #31	Smyd3 (MGP_PahariEiJ_G0028196) #32	MGP_PahariEiJ_G0028197 #33	MGP_PahariEiJ_G0028198 #33	Cnst (MGP_PahariEiJ_G0028199) #34	Sccpdh (MGP_PahariEiJ_G0028200) #35	Kif28 (MGP_PahariEiJ_G0028201)	MGP_PahariEiJ_G0028202
Rat	MODERN SPECIES	4	Grem2 (ENSRNOG00000003616) #7	Rgs7 (ENSRNOG00000021984) #8	Fh (ENSRNOG00000003653) #9	Kmo (ENSRNOG00000003709) #10	Chml (ENSRNOG00000067369)	Opn3 (ENSRNOG00000003778) #11	Wdr64 (ENSRNOG00000038083) #12	ENSRNOG00000064024	Exo1 (ENSRNOG00000056209) #14	Becn2 (ENSRNOG00000038076) #16	Pld5 (ENSRNOG00000003997) #18	Cep170 (ENSRNOG00000004127) #19	Sdccag8 (ENSRNOG00000004181) #20	Akt3 (ENSRNOG00000021497) #21	Rpl30l1 (ENSRNOG00000057677)	Zbtb18 (ENSRNOG00000004423) #22	C13h1orf100 (ENSRNOG00000021411) #24	Adss (ENSRNOG00000004481) #25	Catspere (ENSRNOG00000056537) #26	Desi2 (ENSRNOG00000004524) #27	Btf3-ps1 (ENSRNOG00000031864)	ENSRNOG00000066591	Hnrnpu (ENSRNOG00000033790) #29	Efcab2 (ENSRNOG00000042201) #30	Kif26b (ENSRNOG00000028624) #31	Smyd3 (ENSRNOG00000066304) #32	Tfb2m (ENSRNOG00000002695) #33	Cnst (ENSRNOG00000002710) #34	Sccpdh (ENSRNOG00000066712) #35	Kif28p (ENSRNOG00000050602)	Ahctf1 (ENSRNOG00000023541)
Cricetidae	ANCESTRAL SPECIES	13	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Cricetinae	ANCESTRAL SPECIES	4	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000154289.B	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b	ENSGT00940000156810
Golden Hamster	MODERN SPECIES	697	Spta1 (ENSMAUG00000000194)	ENSMAUG00000010198	Grem2 (ENSMAUG00000018477) #7	Rgs7 (ENSMAUG00000010632) #8	Fh1 (ENSMAUG00000003139) #9	Kmo (ENSMAUG00000000461) #10	Chml (ENSMAUG00000011591)	Opn3 (ENSMAUG00000010182) #11	Wdr64 (ENSMAUG00000000597) #12	ENSMAUG00000017315 #14	Pld5 (ENSMAUG00000006656) #18	ENSMAUG00000001856 #19	ENSMAUG00000001243 #19	Sdccag8 (ENSMAUG00000000358) #20	Akt3 (ENSMAUG00000016204) #21	Zbtb18 (ENSMAUG00000020134) #22	1700016C15Rik (ENSMAUG00000020005) #24	Adss (ENSMAUG00000017188) #25	Desi2 (ENSMAUG00000015341) #27	Cox20 (ENSMAUG00000009696) #28	Hnrnpu (ENSMAUG00000008842) #29	Efcab2 (ENSMAUG00000002894) #30	Kif26b (ENSMAUG00000000950) #31	ENSMAUG00000015084 #32	ENSMAUG00000014687	Tfb2m (ENSMAUG00000015170) #33	Cnst (ENSMAUG00000014643) #34	Sccpdh (ENSMAUG00000014050) #35	Kif28 (ENSMAUG00000011576)	Ahctf1 (ENSMAUG00000007505)	ENSMAUG00000018123
Chinese hamster chok1gshd	MODERN SPECIES	2	ENSCGRG00001003844	ENSCGRG00001006655	Grem2 (ENSCGRG00001002244) #7	Rgs7 (ENSCGRG00001018878) #8	Fh1 (ENSCGRG00001016572) #9	KMO (ENSCGRG00001021105) #10	Opn3 (ENSCGRG00001006852) #11	Wdr64 (ENSCGRG00001024578) #12	Exo1 (ENSCGRG00001014562) #14	Becn2 (ENSCGRG00001004210) #16	Pld5 (ENSCGRG00001018809) #18	Cep170 (ENSCGRG00001008216) #19	Sdccag8 (ENSCGRG00001012298) #20	ENSCGRG00001022350	Akt3 (ENSCGRG00001014427) #21	Zbtb18 (ENSCGRG00001000848) #22	1700016C15Rik (ENSCGRG00001021462) #24	ADSS (ENSCGRG00001007265) #25	ENSCGRG00001025052	ENSCGRG00001002328	Desi2 (ENSCGRG00001024954) #27	Cox20 (ENSCGRG00001024606) #28	Hnrnpu (ENSCGRG00001020525) #29	Efcab2 (ENSCGRG00001014735) #30	Kif26b (ENSCGRG00001021166) #31	ENSCGRG00001024111	Smyd3 (ENSCGRG00001018690) #32	ENSCGRG00001003395	Tfb2m (ENSCGRG00001000953) #33	Cnst (ENSCGRG00001019670) #34	ENSCGRG00001016196 #35
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT01060000248581.B	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Prairie vole	MODERN SPECIES	14								ENSMOCG00000011680	Pld5 (ENSMOCG00000012598) #18	ENSMOCG00000020684	ENSMOCG00000018239 #19	ENSMOCG00000002769 #19	ENSMOCG00000007828	Sdccag8 (ENSMOCG00000022174) #20	Akt3 (ENSMOCG00000010696) #21	Zbtb18 (ENSMOCG00000018289) #22	1700016C15Rik (ENSMOCG00000022902) #24	Adss (ENSMOCG00000021076) #25	ENSMOCG00000017731	Desi2 (ENSMOCG00000017452) #27	Cox20 (ENSMOCG00000020586) #28	Hnrnpu (ENSMOCG00000015623) #29	Efcab2 (ENSMOCG00000016106) #30	Kif26b (ENSMOCG00000018386) #31	Smyd3 (ENSMOCG00000019317) #32	Tfb2m (ENSMOCG00000016864) #33	Cnst (ENSMOCG00000006613) #34	Sccpdh (ENSMOCG00000017380) #35	Kif28 (ENSMOCG00000022053)	Ahctf1 (ENSMOCG00000004774)	Cdc42bpa (ENSMOCG00000019771)
Northern American deer mouse	MODERN SPECIES	2	Grem2 (ENSPEMG00000029383) #7	Rgs7 (ENSPEMG00000015345) #8	Fh1 (ENSPEMG00000012348) #9	Kmo (ENSPEMG00000010016) #10	Opn3 (ENSPEMG00000018829) #11	Wdr64 (ENSPEMG00000015374) #12	ENSPEMG00000027400	Exo1 (ENSPEMG00000019110) #14	Becn2 (ENSPEMG00000016424) #16	Pld5 (ENSPEMG00000020103) #18	Cep170 (ENSPEMG00000020234) #19	Sdccag8 (ENSPEMG00000019543) #20	ENSPEMG00000028582	Akt3 (ENSPEMG00000019381) #21	ENSPEMG00000013477	Zbtb18 (ENSPEMG00000025154) #22	Adss (ENSPEMG00000012013) #25	ENSPEMG00000024531 #26	Desi2 (ENSPEMG00000010913) #27	Cox20 (ENSPEMG00000010346) #28	ENSPEMG00000029548	Hnrnpu (ENSPEMG00000009568) #29	ENSPEMG00000008954 #30	Kif26b (ENSPEMG00000007146) #31	Smyd3 (ENSPEMG00000002180) #32	Tfb2m (ENSPEMG00000018713) #33	Cnst (ENSPEMG00000018492) #34	Sccpdh (ENSPEMG00000017539) #35	Kif28 (ENSPEMG00000014020)	ENSPEMG00000016591	Ahctf1 (ENSPEMG00000000305)
Lagomorpha	ANCESTRAL SPECIES	243										ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27
Rabbit	MODERN SPECIES	7	ENSOCUG00000025911	EDARADD (ENSOCUG00000022288)	ERO1B (ENSOCUG00000012789)	GPR137B (ENSOCUG00000012779)	ENSOCUG00000028015	ENSOCUG00000025961 #11	ENSOCUG00000007716 #12	BECN2 (ENSOCUG00000017468) #16	ENSOCUG00000027414 #15	ENSOCUG00000034818	PLD5 (ENSOCUG00000009192) #18	CEP170 (ENSOCUG00000000173) #19	SDCCAG8 (ENSOCUG00000015881) #20	ENSOCUG00000037452	AKT3 (ENSOCUG00000015901) #21	ZBTB18 (ENSOCUG00000007968) #22	C1orf100 (ENSOCUG00000030082) #24	ADSS2 (ENSOCUG00000013982) #25	ENSOCUG00000017531	CATSPERE (ENSOCUG00000012540) #26	DESI2 (ENSOCUG00000012551) #27	ENSOCUG00000033583	ENSOCUG00000038233	ENSOCUG00000023897	ENSOCUG00000039107 #28	HNRNPU (ENSOCUG00000014469) #29	EFCAB2 (ENSOCUG00000029593) #30	KIF26B (ENSOCUG00000008220) #31	SMYD3 (ENSOCUG00000008229) #32	ENSOCUG00000013727	ENSOCUG00000004067 #34
Primates	ANCESTRAL SPECIES	7	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900	ENSGT01030000234517.H.b
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b.c #7	ENSGT00940000154209.a.b.d #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Lemuriformes	ANCESTRAL SPECIES	6	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b.c #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Mouse lemur	MODERN SPECIES	8	AGT (ENSMICG00000028058)	COG2 (ENSMICG00000004171)	PGBD5 (ENSMICG00000004140)	GALNT2 (ENSMICG00000004134)	RGS7 (ENSMICG00000003443) #8	ENSMICG00000003451 #9	KMO (ENSMICG00000003459) #10	OPN3 (ENSMICG00000003465) #11	WDR64 (ENSMICG00000003466) #12	EXO1 (ENSMICG00000042831) #14	MAP1LC3C (ENSMICG00000041705) #15	PLD5 (ENSMICG00000003488) #18	CEP170 (ENSMICG00000011831) #19	SDCCAG8 (ENSMICG00000015485) #20	AKT3 (ENSMICG00000015514) #21	ZBTB18 (ENSMICG00000007600) #22	C1orf100 (ENSMICG00000042924) #24	ADSS2 (ENSMICG00000035421) #25	CATSPERE (ENSMICG00000007626) #26	ENSMICG00000030505	DESI2 (ENSMICG00000034096) #27	COX20 (ENSMICG00000043634) #28	HNRNPU (ENSMICG00000004616) #29	EFCAB2 (ENSMICG00000041551) #30	KIF26B (ENSMICG00000005649) #31	SMYD3 (ENSMICG00000005665) #32	TFB2M (ENSMICG00000016790) #33	CNST (ENSMICG00000036496) #34	SCCPDH (ENSMICG00000014588) #35	ENSMICG00000034974	AHCTF1 (ENSMICG00000014617)
Lemuriformes_a	ANCESTRAL SPECIES	113		ENSGT00940000161899	ENSGT00940000154209.a.b.c #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Coquerels sifaka	MODERN SPECIES	304			FMN2 (ENSPCOG00000018209)	GREM2 (ENSPCOG00000008595) #7	RGS7 (ENSPCOG00000023989) #8	ENSPCOG00000021373 #9	KMO (ENSPCOG00000017846) #10	OPN3 (ENSPCOG00000025862) #11	WDR64 (ENSPCOG00000013811) #12	EXO1 (ENSPCOG00000003699) #14	MAP1LC3C (ENSPCOG00000017365) #15	PLD5 (ENSPCOG00000013665) #18	CEP170 (ENSPCOG00000024128) #19	SDCCAG8 (ENSPCOG00000023982) #20	AKT3 (ENSPCOG00000026902) #21	ZBTB18 (ENSPCOG00000027655) #22	C1orf100 (ENSPCOG00000005357) #24	ADSS2 (ENSPCOG00000024381) #25	CATSPERE (ENSPCOG00000011368) #26	DESI2 (ENSPCOG00000026547) #27	ENSPCOG00000023802	ENSPCOG00000020107 #28	ENSPCOG00000018655 #29	EFCAB2 (ENSPCOG00000019391) #30	KIF26B (ENSPCOG00000022607) #31	SMYD3 (ENSPCOG00000019858) #32	ENSPCOG00000018802	TFB2M (ENSPCOG00000017595) #33	ENSPCOG00000025467	CNST (ENSPCOG00000014228) #34	SCCPDH (ENSPCOG00000019439) #35
Greater bamboo lemur	MODERN SPECIES	75	ENSPSMG00000023214	GREM2 (ENSPSMG00000023211) #7	ENSPSMG00000023210	RGS7 (ENSPSMG00000023203) #8	FH (ENSPSMG00000023173) #9	KMO (ENSPSMG00000023160) #10	OPN3 (ENSPSMG00000023132) #11	WDR64 (ENSPSMG00000023125) #12	EXO1 (ENSPSMG00000023090) #14	BECN2 (ENSPSMG00000023064) #16	MAP1LC3C (ENSPSMG00000023056) #15	PLD5 (ENSPSMG00000023045) #18	CEP170 (ENSPSMG00000022916) #19	SDCCAG8 (ENSPSMG00000022738) #20	AKT3 (ENSPSMG00000022616) #21	ZBTB18 (ENSPSMG00000022492) #22	ENSPSMG00000022482	C1orf100 (ENSPSMG00000022478) #24	ADSS2 (ENSPSMG00000022472) #25	CATSPERE (ENSPSMG00000022446) #26	ENSPSMG00000022414 #27	COX20 (ENSPSMG00000022388) #28	HNRNPU (ENSPSMG00000022205) #29	EFCAB2 (ENSPSMG00000021989) #30	KIF26B (ENSPSMG00000021984) #31	SMYD3 (ENSPSMG00000021959) #32	TFB2M (ENSPSMG00000021950) #33	CNST (ENSPSMG00000021909) #34	SCCPDH (ENSPSMG00000021861) #35
Bushbaby	MODERN SPECIES	256										ENSOGAG00000025244 #16	MAP1LC3C (ENSOGAG00000005130) #15	PLD5 (ENSOGAG00000032441) #18	CEP170 (ENSOGAG00000024170) #19	SDCCAG8 (ENSOGAG00000016400) #20	AKT3 (ENSOGAG00000016417) #21	ZBTB18 (ENSOGAG00000013580) #22	C1orf100 (ENSOGAG00000006163) #24	ADSS2 (ENSOGAG00000006165) #25	CATSPERE (ENSOGAG00000006168) #26	HNRNPU (ENSOGAG00000014024) #29	KIF26B (ENSOGAG00000027006) #31	ENSOGAG00000010891 #32	ENSOGAG00000030964 #32	TFB2M (ENSOGAG00000007823) #33	CNST (ENSOGAG00000007827) #34	SCCPDH (ENSOGAG00000007830) #35	AHCTF1 (ENSOGAG00000003786)	CDC42BPA (ENSOGAG00000016679)	COQ8A (ENSOGAG00000016671)	PSEN2 (ENSOGAG00000016839)	ENSOGAG00000034519 #16
Haplorrhini	ANCESTRAL SPECIES	41	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900
Tarsier	MODERN SPECIES	3803																ZBTB18 (ENSTSYG00000030836) #22	C1orf100 (ENSTSYG00000004445) #24
Simiiformes	ANCESTRAL SPECIES	31	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00910000147185	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900
Platyrrhini	ANCESTRAL SPECIES	24	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A.x.a #9	ENSGT00390000000747 #10	ENSGT00910000147185	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b.fb.a #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158.w.b #28	ENSGT00910000147125	ENSGT00390000016158.w.a #28	ENSGT00940000156546.l.a #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900
Cebidae	ANCESTRAL SPECIES	23	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A.x.a #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b.fb.a #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158.w.b #28	ENSGT00910000147125	ENSGT00390000016158.w.a #28	ENSGT00940000156546.l.a #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900
Cebidae_a	ANCESTRAL SPECIES	11	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A.x.a #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b.fb.a #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.w.a #28	ENSGT00940000156546.l.a #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900	ENSGT00940000163997
Bolivian squirrel monkey	MODERN SPECIES	114	ENSSBOG00000028772	ENSSBOG00000030391	GREM2 (ENSSBOG00000018825) #7	ENSSBOG00000028764	RGS7 (ENSSBOG00000005787) #8	ENSSBOG00000031759 #9	KMO (ENSSBOG00000028370) #10	ENSSBOG00000031868 #11	WDR64 (ENSSBOG00000024836) #12	EXO1 (ENSSBOG00000023658) #14	MAP1LC3C (ENSSBOG00000032837) #15	PLD5 (ENSSBOG00000031034) #18	CEP170 (ENSSBOG00000026709) #19	SDCCAG8 (ENSSBOG00000017248) #20	AKT3 (ENSSBOG00000029542) #21	ZBTB18 (ENSSBOG00000023273) #22	C1orf100 (ENSSBOG00000025161) #24	ENSSBOG00000021320 #25	ENSSBOG00000019992	CATSPERE (ENSSBOG00000034772) #26	DESI2 (ENSSBOG00000021690) #27	COX20 (ENSSBOG00000029804) #28	HNRNPU (ENSSBOG00000026500) #29	EFCAB2 (ENSSBOG00000034755) #30	KIF26B (ENSSBOG00000034697) #31	SMYD3 (ENSSBOG00000026164) #32	ENSSBOG00000035160	TFB2M (ENSSBOG00000033950) #33	CNST (ENSSBOG00000028424) #34	SCCPDH (ENSSBOG00000021995) #35	AHCTF1 (ENSSBOG00000004404)
Capuchin	MODERN SPECIES	75	GREM2 (ENSCCAG00000020252) #7	MED11 (ENSCCAG00000021433)	ENSCCAG00000032322	RGS7 (ENSCCAG00000025701) #8	FH (ENSCCAG00000031699) #9	KMO (ENSCCAG00000036275) #10	OPN3 (ENSCCAG00000030966) #11	WDR64 (ENSCCAG00000027334) #12	EXO1 (ENSCCAG00000021808) #14	MAP1LC3C (ENSCCAG00000015684) #15	PLD5 (ENSCCAG00000033339) #18	CEP170 (ENSCCAG00000030281) #19	ENSCCAG00000035019	SDCCAG8 (ENSCCAG00000024200) #20	AKT3 (ENSCCAG00000022873) #21	ZBTB18 (ENSCCAG00000027386) #22	ENSCCAG00000012153	ENSCCAG00000034313	C1orf100 (ENSCCAG00000026529) #24	ADSS (ENSCCAG00000019985) #25	CATSPERE (ENSCCAG00000024353) #26	DESI2 (ENSCCAG00000032727) #27	ENSCCAG00000029940	ENSCCAG00000035009 #28	ENSCCAG00000037859 #29	ENSCCAG00000032757 #30	KIF26B (ENSCCAG00000031008) #31	ENSCCAG00000021180	SMYD3 (ENSCCAG00000021189) #32	TFB2M (ENSCCAG00000028811) #33	CNST (ENSCCAG00000038009) #34
Marmoset	MODERN SPECIES	10	ENSCJAG00000080318	KMO (ENSCJAG00000017333) #10	OPN3 (ENSCJAG00000017298) #11	ENSCJAG00000079675	WDR64 (ENSCJAG00000017281) #12	EXO1 (ENSCJAG00000017241) #14	BECN2 (ENSCJAG00000021914) #16	MAP1LC3C (ENSCJAG00000080978) #15	PLD5 (ENSCJAG00000017218) #18	ENSCJAG00000077919	CEP170 (ENSCJAG00000017155) #19	SDCCAG8 (ENSCJAG00000017112) #20	ENSCJAG00000086445	AKT3 (ENSCJAG00000017090) #21	ENSCJAG00000076464	ZBTB18 (ENSCJAG00000040735) #22	ENSCJAG00000085383	C1orf100 (ENSCJAG00000017074) #24	ADSS2 (ENSCJAG00000017069) #25	CATSPERE (ENSCJAG00000017054) #26	DESI2 (ENSCJAG00000017043) #27	ENSCJAG00000048443 #28	HNRNPU (ENSCJAG00000016914) #29	ENSCJAG00000076624	ENSCJAG00000086913	ENSCJAG00000085469	ENSCJAG00000075122	EFCAB2 (ENSCJAG00000016907) #30	KIF26B (ENSCJAG00000016866) #31	ENSCJAG00000070862	ENSCJAG00000055416
Mas night monkey	MODERN SPECIES	1115	GREM2 (ENSANAG00000019563) #7	ENSANAG00000024783	RGS7 (ENSANAG00000035979) #8	ENSANAG00000034794 #9	KMO (ENSANAG00000032312) #10	OPN3 (ENSANAG00000037150) #11	ENSANAG00000028678	WDR64 (ENSANAG00000022900) #12	EXO1 (ENSANAG00000020445) #14	MAP1LC3C (ENSANAG00000021613) #15	PLD5 (ENSANAG00000022321) #18	CEP170 (ENSANAG00000023200) #19	SDCCAG8 (ENSANAG00000022837) #20	ENSANAG00000022761	AKT3 (ENSANAG00000031454) #21	ZBTB18 (ENSANAG00000037877) #22	C1orf100 (ENSANAG00000029438) #24	ENSANAG00000033603 #25	CATSPERE (ENSANAG00000038006) #26	DESI2 (ENSANAG00000036524) #27	ENSANAG00000028263	ENSANAG00000029422 #28	ENSANAG00000033895 #29	EFCAB2 (ENSANAG00000033282) #30	KIF26B (ENSANAG00000030464) #31	SMYD3 (ENSANAG00000032109) #32	ENSANAG00000037652	TFB2M (ENSANAG00000038040) #33	CNST (ENSANAG00000022435) #34	ENSANAG00000035995	SCCPDH (ENSANAG00000017200) #35
Catarrhini	ANCESTRAL SPECIES	27	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00910000147185	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00940000161436.b	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900	ENSGT00940000154251.A.b.a.a
Cercopithecidae	ANCESTRAL SPECIES	33	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00910000147185	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00940000161436.b	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b.o #33	ENSGT00390000005861 #34	ENSGT00510000047669.j	ENSGT00390000004799 #35	ENSGT00390000018900
Cercopithecinae	ANCESTRAL SPECIES	18	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00910000147185	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00940000161436.b	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b.o #33	ENSGT00390000005861 #34	ENSGT00510000047669.j	ENSGT00390000004799 #35	ENSGT00390000018900
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000156661 #8	ENSGT01100000264485	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00910000147185	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00940000161436.b	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00910000148055	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00910000147430	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b.o #33	ENSGT00390000005861 #34	ENSGT00510000047669.j
Macaca	DUPLICATION
Macaca	ANCESTRAL SPECIES		ENSGT00940000156661 #8	ENSGT01100000264485	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00910000147185	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852.o #15	ENSGT00940000161436.b	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b.c #22	ENSGT00910000148055	ENSGT00940000155092.b.d #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158.v #28	ENSGT00910000147430	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b.o #33	ENSGT00390000005861 #34	ENSGT00510000047669.j
Pig-tailed macaque	MODERN SPECIES	530	ENSMNEG00000020233	ENSMNEG00000028783	GREM2 (ENSMNEG00000004273) #7	RGS7 (ENSMNEG00000036900) #8	ENSMNEG00000043907	FH (ENSMNEG00000031503) #9	KMO (ENSMNEG00000043449) #10	OPN3 (ENSMNEG00000039263) #11	ENSMNEG00000027552	WDR64 (ENSMNEG00000043406) #12	EXO1 (ENSMNEG00000032416) #14	PLD5 (ENSMNEG00000041098) #18	CEP170 (ENSMNEG00000016347) #19	SDCCAG8 (ENSMNEG00000029839) #20	AKT3 (ENSMNEG00000042335) #21	ZBTB18 (ENSMNEG00000024588) #22	ENSMNEG00000016127	C1orf100 (ENSMNEG00000031871) #24	ADSS2 (ENSMNEG00000035852) #25	CATSPERE (ENSMNEG00000026147) #26	DESI2 (ENSMNEG00000033512) #27	COX20 (ENSMNEG00000016736) #28	ENSMNEG00000039700	HNRNPU (ENSMNEG00000043645) #29	ENSMNEG00000027013	ENSMNEG00000033617 #30	KIF26B (ENSMNEG00000043221) #31	SMYD3 (ENSMNEG00000034852) #32	ENSMNEG00000040857	TFB2M (ENSMNEG00000034600) #33	CNST (ENSMNEG00000029053) #34
Macaca_a	ANCESTRAL SPECIES																	ENSGT00940000155092.b.c #22
Crab-eating macaque	MODERN SPECIES	7	NSRP1 (ENSMFAG00000055182)	ENSMFAG00000061523	SLC6A4 (ENSMFAG00000002876)	BLMH (ENSMFAG00000001589)	TMIGD1 (ENSMFAG00000042486)	CPD (ENSMFAG00000042013)	GOSR1 (ENSMFAG00000038581)	ENSMFAG00000043507	ENSMFAG00000055017	ENSMFAG00000033846	ENSMFAG00000062468	ENSMFAG00000030053	ENSMFAG00000059147	ENSMFAG00000047278	ENSMFAG00000054369	ENSMFAG00000051027 #22	ENSMFAG00000031748	ENSMFAG00000051168	ENSMFAG00000032719	ENSMFAG00000061903	NF1 (ENSMFAG00000033978)	OMG (ENSMFAG00000029409)	EVI2B (ENSMFAG00000053252)	EVI2A (ENSMFAG00000003552)	RAB11FIP4 (ENSMFAG00000036401)	ENSMFAG00000047784	ENSMFAG00000064943	ENSMFAG00000063616	COPRS (ENSMFAG00000030359)	UTP6 (ENSMFAG00000038842)	SUZ12 (ENSMFAG00000040091)
Macaca	ANCESTRAL SPECIES		ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00910000147185	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852.o #15	ENSGT00940000161436.b	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b.c #22	ENSGT00910000148055	ENSGT00940000155092.b.d #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158.v #28	ENSGT00910000147430	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b.o #33	ENSGT00390000005861 #34	ENSGT00510000047669.j	ENSGT00390000004799 #35	ENSGT00390000018900
Macaca_a	ANCESTRAL SPECIES		ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852.o #15	ENSGT00940000161436.b	ENSGT00950000183059.b.a.b #18	ENSGT01100000263539.a.a.b.a.a.a.a.b.b	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b.b.a.a.a.a.b.a.a	ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.a.b.b.a.a	ENSGT00940000155092.b.d #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b.o #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900	ENSGT00940000153165.a.b.a	ENSGT00940000164696
Crab-eating macaque	MODERN SPECIES		KMO (ENSMFAG00000044420) #10	OPN3 (ENSMFAG00000042077) #11	WDR64 (ENSMFAG00000032673) #12	EXO1 (ENSMFAG00000023098) #14	BECN2 (ENSMFAG00000060731) #16	ENSMFAG00000039495 #15	ENSMFAG00000055286	PLD5 (ENSMFAG00000038798) #18	ENSMFAG00000064196	CEP170 (ENSMFAG00000002285) #19	SDCCAG8 (ENSMFAG00000045247) #20	AKT3 (ENSMFAG00000033261) #21	ENSMFAG00000063443	ENSMFAG00000047436	ENSMFAG00000063696	ZBTB18 (ENSMFAG00000065061) #22	C1orf100 (ENSMFAG00000037345) #24	ADSS2 (ENSMFAG00000032956) #25	CATSPERE (ENSMFAG00000033487) #26	ENSMFAG00000057921	DESI2 (ENSMFAG00000032549) #27	COX20 (ENSMFAG00000039162) #28	HNRNPU (ENSMFAG00000037308) #29	EFCAB2 (ENSMFAG00000039610) #30	SMYD3 (ENSMFAG00000045761) #32	TFB2M (ENSMFAG00000000959) #33	ENSMFAG00000051929	CNST (ENSMFAG00000000416) #34	SCCPDH (ENSMFAG00000044986) #35	AHCTF1 (ENSMFAG00000045763)	ENSMFAG00000003501
Rhesus	MODERN SPECIES		FH (ENSMMUG00000005667) #9	KMO (ENSMMUG00000005668) #10	OPN3 (ENSMMUG00000005669) #11	WDR64 (ENSMMUG00000008763) #12	EXO1 (ENSMMUG00000008761) #14	BECN2 (ENSMMUG00000060345) #16	ENSMMUG00000053723 #15	PLD5 (ENSMMUG00000004265) #18	ENSMMUG00000062759	ENSMMUG00000059561	CEP170 (ENSMMUG00000019914) #19	SDCCAG8 (ENSMMUG00000019994) #20	AKT3 (ENSMMUG00000019995) #21	ENSMMUG00000049847	ENSMMUG00000063991	ZBTB18 (ENSMMUG00000015664) #22	C1H1orf100 (ENSMMUG00000000015) #24	ADSS2 (ENSMMUG00000000016) #25	ENSMMUG00000062093	CATSPERE (ENSMMUG00000000021) #26	DESI2 (ENSMMUG00000022310) #27	ENSMMUG00000062648	COX20 (ENSMMUG00000031175) #28	HNRNPU (ENSMMUG00000021098) #29	ENSMMUG00000053368	EFCAB2 (ENSMMUG00000011424) #30	KIF26B (ENSMMUG00000017324) #31	SMYD3 (ENSMMUG00000005777) #32	TFB2M (ENSMMUG00000055490) #33	ENSMMUG00000059690	CNST (ENSMMUG00000011380) #34
Cercopithecinae_b	ANCESTRAL SPECIES	3	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT01100000264485	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00910000148055	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00910000147430	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b.o #33	ENSGT00390000005861 #34	ENSGT00510000047669.j
Olive baboon	MODERN SPECIES		WDR64 (ENSPANG00000021032) #12	ENSPANG00000049821	EXO1 (ENSPANG00000005526) #14	ENSPANG00000037647	ENSPANG00000041812	ENSPANG00000049690	ENSPANG00000045430	MAP1LC3C (ENSPANG00000044045) #15	ENSPANG00000042045	PLD5 (ENSPANG00000005955) #18	CEP170 (ENSPANG00000022781) #19	SDCCAG8 (ENSPANG00000010168) #20	AKT3 (ENSPANG00000010019) #21	ENSPANG00000037188	ENSPANG00000044679	ZBTB18 (ENSPANG00000021934) #22	ENSPANG00000004992 #24	ADSS2 (ENSPANG00000006358) #25	CATSPERE (ENSPANG00000029860) #26	DESI2 (ENSPANG00000012978) #27	ENSPANG00000032745	COX20 (ENSPANG00000002384) #28	HNRNPU (ENSPANG00000011643) #29	EFCAB2 (ENSPANG00000026471) #30	ENSPANG00000049532	KIF26B (ENSPANG00000009793) #31	SMYD3 (ENSPANG00000005527) #32	ENSPANG00000050627	ENSPANG00000037010	TFB2M (ENSPANG00000050993) #33	ENSPANG00000025211
Cercopithecinae_d	ANCESTRAL SPECIES	68	ENSGT00940000153386.B.b	ENSGT00940000155196.r	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00910000148055	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158.v #28	ENSGT00910000147430	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b.o #33	ENSGT00390000005861 #34	ENSGT00510000047669.j	ENSGT00390000004799 #35
Sooty mangabey	MODERN SPECIES	449	ENSCATG00000042350	GREM2 (ENSCATG00000021508) #7	RGS7 (ENSCATG00000035083) #8	ENSCATG00000044040	FH (ENSCATG00000044877) #9	KMO (ENSCATG00000037464) #10	OPN3 (ENSCATG00000042188) #11	WDR64 (ENSCATG00000013569) #12	EXO1 (ENSCATG00000006511) #14	MAP1LC3C (ENSCATG00000031341) #15	PLD5 (ENSCATG00000021605) #18	CEP170 (ENSCATG00000031357) #19	SDCCAG8 (ENSCATG00000039425) #20	ENSCATG00000012672	AKT3 (ENSCATG00000033494) #21	ZBTB18 (ENSCATG00000040414) #22	ENSCATG00000003512	C1orf100 (ENSCATG00000043782) #24	ADSS2 (ENSCATG00000031646) #25	CATSPERE (ENSCATG00000040129) #26	DESI2 (ENSCATG00000039396) #27	COX20 (ENSCATG00000037050) #28	ENSCATG00000007496	HNRNPU (ENSCATG00000035273) #29	ENSCATG00000033734 #30	KIF26B (ENSCATG00000040207) #31	SMYD3 (ENSCATG00000041127) #32	ENSCATG00000039137 #32	TFB2M (ENSCATG00000041118) #33	CNST (ENSCATG00000045327) #34	ENSCATG00000020609
Drill	MODERN SPECIES	807												CEP170 (ENSMLEG00000029097) #19	SDCCAG8 (ENSMLEG00000008647) #20	ENSMLEG00000041086	AKT3 (ENSMLEG00000042542) #21	ZBTB18 (ENSMLEG00000023925) #22	ENSMLEG00000005578	C1orf100 (ENSMLEG00000027336) #24	ADSS2 (ENSMLEG00000036094) #25	CATSPERE (ENSMLEG00000035016) #26	DESI2 (ENSMLEG00000039449) #27	COX20 (ENSMLEG00000034231) #28	ENSMLEG00000015197	HNRNPU (ENSMLEG00000040141) #29	EFCAB2 (ENSMLEG00000032092) #30	KIF26B (ENSMLEG00000033132) #31
Vervet Monkey	MODERN SPECIES	17	FMN2 (ENSCSAG00000009553)	GREM2 (ENSCSAG00000019372) #7	RGS7 (ENSCSAG00000009524) #8	FH (ENSCSAG00000009513) #9	KMO (ENSCSAG00000009486) #10	OPN3 (ENSCSAG00000009434) #11	WDR64 (ENSCSAG00000009423) #12	EXO1 (ENSCSAG00000009399) #14	ENSCSAG00000009385 #15	BECN2 (ENSCSAG00000019373) #16	MAP1LC3C (ENSCSAG00000009372) #15	PLD5 (ENSCSAG00000009359) #18	CEP170 (ENSCSAG00000009345) #19	SDCCAG8 (ENSCSAG00000009336) #20	AKT3 (ENSCSAG00000009327) #21	ZBTB18 (ENSCSAG00000009318) #22	C1orf100 (ENSCSAG00000009313) #24	ADSS2 (ENSCSAG00000009306) #25	CATSPERE (ENSCSAG00000009285) #26	DESI2 (ENSCSAG00000009236) #27	COX20 (ENSCSAG00000009227) #28	HNRNPU (ENSCSAG00000009219) #29	EFCAB2 (ENSCSAG00000009206) #30	KIF26B (ENSCSAG00000009182) #31	TFB2M (ENSCSAG00000009135) #33	CNST (ENSCSAG00000009127) #34	SCCPDH (ENSCSAG00000009117) #35	AHCTF1 (ENSCSAG00000009102)	ZNF695 (ENSCSAG00000009076)	ENSCSAG00000009060	ENSCSAG00000009031
Rhinopithecus	ANCESTRAL SPECIES	63	ENSGT00940000153386.B.b	ENSGT00940000155196.r	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A.v #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32
Black snub-nosed monkey	MODERN SPECIES	319																ZBTB18 (ENSRBIG00000042576) #22	C1orf100 (ENSRBIG00000036507) #24	ADSS2 (ENSRBIG00000029921) #25	CATSPERE (ENSRBIG00000041705) #26	DESI2 (ENSRBIG00000032083) #27	ENSRBIG00000030032	COX20 (ENSRBIG00000032427) #28	HNRNPU (ENSRBIG00000031519) #29	EFCAB2 (ENSRBIG00000029218) #30	KIF26B (ENSRBIG00000037736) #31	SMYD3 (ENSRBIG00000045007) #32
Golden snub-nosed monkey	MODERN SPECIES	2836													CEP170 (ENSRROG00000038486) #19	SDCCAG8 (ENSRROG00000031685) #20	AKT3 (ENSRROG00000034576) #21	ZBTB18 (ENSRROG00000040861) #22	C1orf100 (ENSRROG00000043026) #24	ADSS2 (ENSRROG00000035892) #25	CATSPERE (ENSRROG00000028619) #26	DESI2 (ENSRROG00000036662) #27	COX20 (ENSRROG00000032327) #28	HNRNPU (ENSRROG00000041642) #29	EFCAB2 (ENSRROG00000022255) #30
Hominoidea	ANCESTRAL SPECIES	7	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00910000147185	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00940000161436.b	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00910000146860.b.a.a	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900	ENSGT00940000154251.A.b.a.a
Gibbon	MODERN SPECIES	20	ENSNLEG00000031828	RGS7 (ENSNLEG00000003630) #8	FH (ENSNLEG00000003677) #9	KMO (ENSNLEG00000003718) #10	ENSNLEG00000033151	OPN3 (ENSNLEG00000003760) #11	WDR64 (ENSNLEG00000003772) #12	EXO1 (ENSNLEG00000003806) #14	ENSNLEG00000035007	MAP1LC3C (ENSNLEG00000003820) #15	PLD5 (ENSNLEG00000003830) #18	ENSNLEG00000003866 #19	ENSNLEG00000034308	SDCCAG8 (ENSNLEG00000003873) #20	AKT3 (ENSNLEG00000003927) #21	ZBTB18 (ENSNLEG00000003981) #22	C1orf100 (ENSNLEG00000003983) #24	ADSS2 (ENSNLEG00000028310) #25	CATSPERE (ENSNLEG00000004005) #26	DESI2 (ENSNLEG00000004019) #27	ENSNLEG00000028968	ENSNLEG00000032561	COX20 (ENSNLEG00000004027) #28	ENSNLEG00000004046	ENSNLEG00000004108 #30	ENSNLEG00000004117 #31	SMYD3 (ENSNLEG00000004133) #32	TFB2M (ENSNLEG00000004146) #33	CNST (ENSNLEG00000004157) #34	SCCPDH (ENSNLEG00000004170) #35	AHCTF1 (ENSNLEG00000004215)
Hominidae	ANCESTRAL SPECIES	6	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183000.c.a.a.i.a.a.b.a.b	ENSGT00940000161852 #15	ENSGT00940000161436.b	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00910000146860.b.a.a	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900	ENSGT00940000154251.A.b.a.a
Orangutan	MODERN SPECIES		ENSPPYG00000032558	GREM2 (ENSPPYG00000000073) #7	RGS7 (ENSPPYG00000000072) #8	FH (ENSPPYG00000000071) #9	KMO (ENSPPYG00000000070) #10	OPN3 (ENSPPYG00000000069) #11	WDR64 (ENSPPYG00000000068) #12	EXO1 (ENSPPYG00000000067) #14	BECN2 (ENSPPYG00000000066) #16	ENSPPYG00000037133	MAP1LC3C (ENSPPYG00000010665) #15	PLD5 (ENSPPYG00000000064) #18	CEP170 (ENSPPYG00000000063) #19	SDCCAG8 (ENSPPYG00000000061) #20	AKT3 (ENSPPYG00000000060) #21	ZBTB18 (ENSPPYG00000000059) #22	C1orf100 (ENSPPYG00000000058) #24	ADSS2 (ENSPPYG00000000057) #25	CATSPERE (ENSPPYG00000000056) #26	DESI2 (ENSPPYG00000000055) #27	ENSPPYG00000041762	COX20 (ENSPPYG00000037954) #28	HNRNPU (ENSPPYG00000000052) #29	EFCAB2 (ENSPPYG00000033790) #30	KIF26B (ENSPPYG00000000048) #31	SMYD3 (ENSPPYG00000000047) #32	TFB2M (ENSPPYG00000000046) #33	CNST (ENSPPYG00000000045) #34	ENSPPYG00000030496	SCCPDH (ENSPPYG00000000044) #35	AHCTF1 (ENSPPYG00000000042)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	6	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183000.c.a.a.i.a.a.b.a.b	ENSGT00940000161852 #15	ENSGT00940000161436.b	ENSGT00950000183059.b.a.b.m #18	ENSGT00940000155103.a.b.o #19	ENSGT00910000146860.b.a.a	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900.e	ENSGT00940000154251.A.b.a.a
Gorilla	MODERN SPECIES		KMO (ENSGGOG00000013897) #10	ENSGGOG00000042072 #11	CHML (ENSGGOG00000016322)	WDR64 (ENSGGOG00000015532) #12	EXO1 (ENSGGOG00000013563) #14	BECN2 (ENSGGOG00000008172) #16	ENSGGOG00000043532	MAP1LC3C (ENSGGOG00000000253) #15	PLD5 (ENSGGOG00000011168) #18	ENSGGOG00000007912	ENSGGOG00000028488	ENSGGOG00000043649 #19	SDCCAG8 (ENSGGOG00000007709) #20	ENSGGOG00000022126	AKT3 (ENSGGOG00000007722) #21	ZBTB18 (ENSGGOG00000028442) #22	ADSS2 (ENSGGOG00000011109) #25	C1orf100 (ENSGGOG00000011106) #24	CATSPERE (ENSGGOG00000005744) #26	DESI2 (ENSGGOG00000009797) #27	ENSGGOG00000040495	COX20 (ENSGGOG00000028397) #28	HNRNPU (ENSGGOG00000004061) #29	ENSGGOG00000040325 #30	KIF26B (ENSGGOG00000010397) #31	ENSGGOG00000011667	SMYD3 (ENSGGOG00000034875) #32	TFB2M (ENSGGOG00000001095) #33	CNST (ENSGGOG00000007386) #34	SCCPDH (ENSGGOG00000002544) #35	AHCTF1 (ENSGGOG00000034836)
Homo/Pan group	ANCESTRAL SPECIES	7	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183000.c.a.a.i.a.a.b.a.b	ENSGT00940000161852 #15	ENSGT00940000161436.b	ENSGT00950000183059.b.a.b.m #18	ENSGT00940000155103.a.b.o #19	ENSGT00910000146860.b.a.a	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900.e	ENSGT00940000154251.A.b.a.a
Human	MODERN SPECIES		FMN2 (ENSG00000155816)	GREM2 (ENSG00000180875) #7	RGS7 (ENSG00000182901) #8	FH (ENSG00000091483) #9	KMO (ENSG00000117009) #10	OPN3 (ENSG00000054277) #11	CHML (ENSG00000203668)	WDR64 (ENSG00000162843) #12	EXO1 (ENSG00000174371) #14	BECN2 (ENSG00000196289) #16	MAP1LC3C (ENSG00000197769) #15	PLD5 (ENSG00000180287) #18	CEP170 (ENSG00000143702) #19	SDCCAG8 (ENSG00000054282) #20	AKT3 (ENSG00000117020) #21	ZBTB18 (ENSG00000179456) #22	C1orf100 (ENSG00000173728) #24	ADSS2 (ENSG00000035687) #25	CATSPERE (ENSG00000179397) #26	DESI2 (ENSG00000121644) #27	ENSG00000284188	COX20 (ENSG00000203667) #28	HNRNPU (ENSG00000153187) #29	EFCAB2 (ENSG00000203666) #30	KIF26B (ENSG00000162849) #31	SMYD3 (ENSG00000185420) #32	TFB2M (ENSG00000162851) #33	CNST (ENSG00000162852) #34	SCCPDH (ENSG00000143653) #35	AHCTF1 (ENSG00000153207)	ZNF695 (ENSG00000197472)
Pan	ANCESTRAL SPECIES		ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183000.c.a.a.i.a.a.b.a.b	ENSGT00940000161852 #15	ENSGT00940000161436.b	ENSGT00950000183059.b.a.b.m #18	ENSGT00940000155103.a.b.o #19	ENSGT00910000146860.b.a.a	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000005254.i.a.a.b.a	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900.e	ENSGT00940000154251.A.b.a.a
Bonobo	MODERN SPECIES		RGS7 (ENSPPAG00000031922) #8	FH (ENSPPAG00000029968) #9	KMO (ENSPPAG00000030870) #10	OPN3 (ENSPPAG00000034935) #11	WDR64 (ENSPPAG00000015349) #12	EXO1 (ENSPPAG00000038555) #14	BECN2 (ENSPPAG00000016547) #16	ENSPPAG00000042191	MAP1LC3C (ENSPPAG00000026353) #15	ENSPPAG00000034254	ENSPPAG00000031548 #18	CEP170 (ENSPPAG00000038692) #19	SDCCAG8 (ENSPPAG00000041964) #20	ENSPPAG00000041794	AKT3 (ENSPPAG00000035578) #21	ZBTB18 (ENSPPAG00000035489) #22	C1orf100 (ENSPPAG00000029380) #24	ADSS2 (ENSPPAG00000035584) #25	CATSPERE (ENSPPAG00000039497) #26	DESI2 (ENSPPAG00000036240) #27	ENSPPAG00000027622	COX20 (ENSPPAG00000033034) #28	HNRNPU (ENSPPAG00000038652) #29	ENSPPAG00000030892 #30	KIF26B (ENSPPAG00000036407) #31	SMYD3 (ENSPPAG00000037519) #32	TFB2M (ENSPPAG00000036577) #33	CNST (ENSPPAG00000041140) #34	SCCPDH (ENSPPAG00000041828) #35	AHCTF1 (ENSPPAG00000039155)	ZNF695 (ENSPPAG00000041917)
Chimpanzee	MODERN SPECIES		RGS7 (ENSPTRG00000002161) #8	FH (ENSPTRG00000002163) #9	KMO (ENSPTRG00000002164) #10	OPN3 (ENSPTRG00000002165) #11	WDR64 (ENSPTRG00000002166) #12	EXO1 (ENSPTRG00000002167) #14	BECN2 (ENSPTRG00000044975) #16	ENSPTRG00000050862	MAP1LC3C (ENSPTRG00000023346) #15	ENSPTRG00000047329	PLD5 (ENSPTRG00000002169) #18	CEP170 (ENSPTRG00000002172) #19	SDCCAG8 (ENSPTRG00000002173) #20	ENSPTRG00000049151	AKT3 (ENSPTRG00000002174) #21	ZBTB18 (ENSPTRG00000002175) #22	C1H1orf100 (ENSPTRG00000002177) #24	ADSS2 (ENSPTRG00000002178) #25	CATSPERE (ENSPTRG00000002179) #26	DESI2 (ENSPTRG00000002180) #27	ENSPTRG00000049372	COX20 (ENSPTRG00000038758) #28	HNRNPU (ENSPTRG00000002182) #29	EFCAB2 (ENSPTRG00000030083) #30	KIF26B (ENSPTRG00000002185) #31	ENSPTRG00000045241	SMYD3 (ENSPTRG00000002187) #32	TFB2M (ENSPTRG00000002188) #33	CNST (ENSPTRG00000002189) #34	SCCPDH (ENSPTRG00000002191) #35	AHCTF1 (ENSPTRG00000051402)
Laurasiatheria	ANCESTRAL SPECIES	28	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155092.b #22
Common shrew	MODERN SPECIES	12065																ZBTB18 (ENSSARG00000002984) #22
Hedgehog	MODERN SPECIES	15407																ZBTB18 (ENSEEUG00000014181) #22
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Artiodactyla	ANCESTRAL SPECIES	25			ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Suina	ANCESTRAL SPECIES	55									ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005.k #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799.j #35	ENSGT00940000163104	ENSGT00390000018900
Pig	MODERN SPECIES	1	PSEN2 (ENSSSCG00000010860)	COQ8A (ENSSSCG00000010861)	CDC42BPA (ENSSSCG00000010862)	AHCTF1 (ENSSSCG00000010863)	ENSSSCG00000060854	SCCPDH (ENSSSCG00000010866) #35	ENSSSCG00000051937	EXO1 (ENSSSCG00000010865) #14	ENSSSCG00000060649	MAP1LC3C (ENSSSCG00000054590) #15	BECN2 (ENSSSCG00000010868) #16	PLD5 (ENSSSCG00000021132) #18	CEP170 (ENSSSCG00000030502) #19	SDCCAG8 (ENSSSCG00000035136) #20	AKT3 (ENSSSCG00000010872) #21	ZBTB18 (ENSSSCG00000060083) #22	C1orf100 (ENSSSCG00000053143) #24	ADSS2 (ENSSSCG00000010874) #25	CATSPERE (ENSSSCG00000035850) #26	DESI2 (ENSSSCG00000010876) #27	ENSSSCG00000044211	ENSSSCG00000059272	ENSSSCG00000059887	COX20 (ENSSSCG00000039618) #28	HNRNPU (ENSSSCG00000010877) #29	EFCAB2 (ENSSSCG00000010878) #30	ENSSSCG00000063102	KIF26B (ENSSSCG00000010879) #31	SMYD3 (ENSSSCG00000022034) #32	TFB2M (ENSSSCG00000023775) #33	CNST (ENSSSCG00000010882) #34
Chacoan peccary	MODERN SPECIES	81									EXO1 (ENSCWAG00000001682) #14	MAP1LC3C (ENSCWAG00000001710) #15	ENSCWAG00000001728 #16	PLD5 (ENSCWAG00000001768) #18	CEP170 (ENSCWAG00000001838) #19	SDCCAG8 (ENSCWAG00000001897) #20	AKT3 (ENSCWAG00000001916) #21	ZBTB18 (ENSCWAG00000001944) #22	C1orf100 (ENSCWAG00000001960) #24	ADSS2 (ENSCWAG00000001982) #25	CATSPERE (ENSCWAG00000002042) #26	ENSCWAG00000002184 #27	COX20 (ENSCWAG00000002207) #28	HNRNPU (ENSCWAG00000002240) #29	EFCAB2 (ENSCWAG00000002370) #30	KIF26B (ENSCWAG00000002398) #31	SMYD3 (ENSCWAG00000002432) #32	TFB2M (ENSCWAG00000002455) #33	CNST (ENSCWAG00000002475) #34	SCCPDH (ENSCWAG00000002496) #35	ENSCWAG00000002521	AHCTF1 (ENSCWAG00000002590)	CDC42BPA (ENSCWAG00000002744)
Artiodactyla_a	ANCESTRAL SPECIES	26			ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Camelidae	ANCESTRAL SPECIES	42				ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Arabian camel	MODERN SPECIES	15	SWT1 (ENSCDRG00005015345)	TRMT1L (ENSCDRG00005015223)	RNF2 (ENSCDRG00005015182)	GREM2 (ENSCDRG00005015158) #7	RGS7 (ENSCDRG00005014699) #8	FH (ENSCDRG00005014551) #9	KMO (ENSCDRG00005014408) #10	CHML (ENSCDRG00005014383)	WDR64 (ENSCDRG00005014181) #12	EXO1 (ENSCDRG00005014129) #14	BECN2 (ENSCDRG00005014073) #16	PLD5 (ENSCDRG00005013810) #18	CEP170 (ENSCDRG00005013439) #19	SDCCAG8 (ENSCDRG00005013241) #20	ENSCDRG00005013167 #21	ENSCDRG00005013085 #22	C1orf100 (ENSCDRG00005013003) #24	ADSS (ENSCDRG00005012920) #25	ENSCDRG00005012892	CATSPERE (ENSCDRG00005012216) #26	DESI2 (ENSCDRG00005012108) #27	COX20 (ENSCDRG00005012045) #28	HNRNPU (ENSCDRG00005010945) #29	EFCAB2 (ENSCDRG00005010782) #30	KIF26B (ENSCDRG00005010480) #31	SMYD3 (ENSCDRG00005010356) #32	TFB2M (ENSCDRG00005010290) #33	ENSCDRG00005010260	CNST (ENSCDRG00005010140) #34	SCCPDH (ENSCDRG00005009923) #35	ENSCDRG00005009657
Artiodactyla_b	ANCESTRAL SPECIES	26		ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00960000192543	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Cetacea	ANCESTRAL SPECIES	23	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00960000192543	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008496.j.a.a.b	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Blue whale	MODERN SPECIES		ENSBMSG00010003118 #11	WDR64 (ENSBMSG00010003150) #12	EXO1 (ENSBMSG00010003255) #14	MAP1LC3C (ENSBMSG00010003275) #15	ENSBMSG00010003287	ENSBMSG00010003296 #16	ENSBMSG00010003312	PLD5 (ENSBMSG00010003324) #18	ENSBMSG00010003345	ENSBMSG00010003348	ENSBMSG00010003352	CEP170 (ENSBMSG00010003367) #19	SDCCAG8 (ENSBMSG00010003393) #20	ENSBMSG00010003399	AKT3 (ENSBMSG00010003415) #21	ZBTB18 (ENSBMSG00010003552) #22	C1orf100 (ENSBMSG00010003557) #24	ENSBMSG00010000022 #25	CATSPERE (ENSBMSG00010000070) #26	ENSBMSG00010000258	DESI2 (ENSBMSG00010000280) #27	ENSBMSG00010000350	COX20 (ENSBMSG00010000364) #28	HNRNPU (ENSBMSG00010000467) #29	EFCAB2 (ENSBMSG00010000616) #30	ENSBMSG00010000642	KIF26B (ENSBMSG00010000697) #31	SMYD3 (ENSBMSG00010000801) #32	TFB2M (ENSBMSG00010000824) #33	CNST (ENSBMSG00010000841) #34	SCCPDH (ENSBMSG00010000887) #35
Odontoceti	ANCESTRAL SPECIES	24	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00960000192543	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008496.j.a.a.b	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000167085.b.a	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Sperm whale	MODERN SPECIES	15	UCK2 (ENSPCTG00005002066)	RGS7 (ENSPCTG00005001794) #8	FH (ENSPCTG00005001704) #9	KMO (ENSPCTG00005001590) #10	CHML (ENSPCTG00005001557)	ENSPCTG00005001549	WDR64 (ENSPCTG00005001451) #12	EXO1 (ENSPCTG00005001388) #14	ENSPCTG00005001333 #16	ENSPCTG00005001305	PLD5 (ENSPCTG00005001235) #18	ENSPCTG00005001193	CEP170 (ENSPCTG00005001113) #19	SDCCAG8 (ENSPCTG00005001062) #20	AKT3 (ENSPCTG00005000992) #21	ZBTB18 (ENSPCTG00005000940) #22	C1orf100 (ENSPCTG00005000925) #24	ADSS (ENSPCTG00005000901) #25	CATSPERE (ENSPCTG00005000795) #26	ENSPCTG00005000757	DESI2 (ENSPCTG00005000724) #27	ENSPCTG00005000694 #28	HNRNPU (ENSPCTG00005000493) #29	ENSPCTG00005000456	EFCAB2 (ENSPCTG00005000430) #30	KIF26B (ENSPCTG00005000340) #31	SMYD3 (ENSPCTG00005021502) #32	ENSPCTG00005021473	TFB2M (ENSPCTG00005021445) #33	CNST (ENSPCTG00005021399) #34	ENSPCTG00005021352
Odontoceti_a	ANCESTRAL SPECIES	27	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00960000192543	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008496.j.a.a.b	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000167085.b.a	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Dolphin	MODERN SPECIES	2175																ZBTB18 (ENSTTRG00000000615) #22
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00960000192543	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008496.j.a.a.b	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000174587	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00970000198226	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000167085.b.a	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000157251.gb.a.b	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT01010000223738	ENSGT00950000183142.a.b.a.b #33
Vaquita	MODERN SPECIES		FH (ENSPSNG00000001550) #9	KMO (ENSPSNG00000001618) #10	CHML (ENSPSNG00000001704)	ENSPSNG00000001713	WDR64 (ENSPSNG00000001764) #12	EXO1 (ENSPSNG00000001879) #14	MAP1LC3C (ENSPSNG00000001915) #15	ENSPSNG00000001924	ENSPSNG00000001933 #16	PLD5 (ENSPSNG00000001962) #18	ENSPSNG00000002004	CEP170 (ENSPSNG00000002060) #19	ENSPSNG00000002116	SDCCAG8 (ENSPSNG00000002144) #20	ENSPSNG00000002237 #21	ZBTB18 (ENSPSNG00000002322) #22	ADSS2 (ENSPSNG00000002341) #25	CATSPERE (ENSPSNG00000002409) #26	ENSPSNG00000002432	DESI2 (ENSPSNG00000002454) #27	COX20 (ENSPSNG00000002553) #28	HNRNPU (ENSPSNG00000002595) #29	EFCAB2 (ENSPSNG00000002698) #30	ENSPSNG00000002754	ENSPSNG00000002773	ENSPSNG00000002787	KIF26B (ENSPSNG00000002808) #31	SMYD3 (ENSPSNG00000002836) #32	ENSPSNG00000002849	TFB2M (ENSPSNG00000002861) #33	CNST (ENSPSNG00000002886) #34
Monodontidae	ANCESTRAL SPECIES		ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00960000192543	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008496.j.a.a.b	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000174587	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00970000198226	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000167085.b.a	ENSGT00940000160590 #30	ENSGT00940000157251.gb.a.b	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT01010000223738	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34
Narwhal	MODERN SPECIES	304	RGS7 (ENSMMNG00015003213) #8	FH (ENSMMNG00015003102) #9	KMO (ENSMMNG00015002991) #10	CHML (ENSMMNG00015002946)	ENSMMNG00015002941	WDR64 (ENSMMNG00015002862) #12	EXO1 (ENSMMNG00015002760) #14	MAP1LC3C (ENSMMNG00015002739) #15	ENSMMNG00015002733	ENSMMNG00015002712 #16	PLD5 (ENSMMNG00015002650) #18	ENSMMNG00015002619	CEP170 (ENSMMNG00015002570) #19	SDCCAG8 (ENSMMNG00015002446) #20	AKT3 (ENSMMNG00015002390) #21	ZBTB18 (ENSMMNG00015002362) #22	ADSS2 (ENSMMNG00015002323) #25	CATSPERE (ENSMMNG00015002177) #26	ENSMMNG00015002116	DESI2 (ENSMMNG00015002070) #27	COX20 (ENSMMNG00015002034) #28	HNRNPU (ENSMMNG00015001837) #29	ENSMMNG00015001758	EFCAB2 (ENSMMNG00015001711) #30	ENSMMNG00015001686	KIF26B (ENSMMNG00015001645) #31	SMYD3 (ENSMMNG00015001622) #32	ENSMMNG00015001589	ENSMMNG00015001571	TFB2M (ENSMMNG00015001555) #33	CNST (ENSMMNG00015001499) #34
Beluga whale	MODERN SPECIES	21		ENSDLEG00000013242	RGS7 (ENSDLEG00000013175) #8	FH (ENSDLEG00000013143) #9	KMO (ENSDLEG00000013114) #10	CHML (ENSDLEG00000013107)	WDR64 (ENSDLEG00000012993) #12	EXO1 (ENSDLEG00000012936) #14	MAP1LC3C (ENSDLEG00000012929) #15	ENSDLEG00000012926	ENSDLEG00000012921 #16	PLD5 (ENSDLEG00000012909) #18	CEP170 (ENSDLEG00000012739) #19	SDCCAG8 (ENSDLEG00000012672) #20	AKT3 (ENSDLEG00000012542) #21	ENSDLEG00000012518 #22	C1orf100 (ENSDLEG00000012503) #24	ADSS (ENSDLEG00000012482) #25	ENSDLEG00000012469 #26	ENSDLEG00000012464	DESI2 (ENSDLEG00000012443) #27	ENSDLEG00000012436 #28	HNRNPU (ENSDLEG00000012413) #29	ENSDLEG00000012400	EFCAB2 (ENSDLEG00000012377) #30	ENSDLEG00000012364	KIF26B (ENSDLEG00000012323) #31	ENSDLEG00000012311	ENSDLEG00000012296 #32	ENSDLEG00000012281	ENSDLEG00000012269
Pecora	ANCESTRAL SPECIES	22	ENSGT01030000234579.C	ENSGT00390000010760	ENSGT01100000263557.A.b.b	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00940000155028.q.a.c	ENSGT01100000263504.a.b.b.b.b
Yarkand deer	MODERN SPECIES	5	DPT (ENSCHYG00000013923)	ENSCHYG00000013793	RGS7 (ENSCHYG00000012979) #8	FH (ENSCHYG00000012784) #9	KMO (ENSCHYG00000012655) #10	ENSCHYG00000012605	WDR64 (ENSCHYG00000012124) #12	EXO1 (ENSCHYG00000012020) #14	MAP1LC3C (ENSCHYG00000018633) #15	BECN2 (ENSCHYG00000018602) #16	PLD5 (ENSCHYG00000018377) #18	CEP170 (ENSCHYG00000017491) #19	ENSCHYG00000017307	SDCCAG8 (ENSCHYG00000016893) #20	AKT3 (ENSCHYG00000016172) #21	ZBTB18 (ENSCHYG00000015900) #22	C1orf100 (ENSCHYG00000015712) #24	ENSCHYG00000015654	ADSS2 (ENSCHYG00000015582) #25	CATSPERE (ENSCHYG00000015191) #26	DESI2 (ENSCHYG00000015061) #27	ENSCHYG00000015006	COX20 (ENSCHYG00000014922) #28	HNRNPU (ENSCHYG00000013134) #29	ENSCHYG00000013042	ENSCHYG00000013023	ENSCHYG00000012934 #30	ENSCHYG00000012805	KIF26B (ENSCHYG00000012555) #31	SMYD3 (ENSCHYG00000012418) #32	ENSCHYG00000012247 #33
Percora_a	ANCESTRAL SPECIES	15	ENSGT00390000010760	ENSGT01100000263557.A.b.b.d	ENSGT01100000263557.A.b.b.c	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00390000001157.C.kc	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00940000155028.q.a.c
Siberian musk deer	MODERN SPECIES	191												CEP170 (ENSMMSG00000003496) #19	ENSMMSG00000003468	SDCCAG8 (ENSMMSG00000003417) #20	AKT3 (ENSMMSG00000003359) #21	ZBTB18 (ENSMMSG00000003334) #22	ENSMMSG00000003326	ENSMMSG00000003313	C1orf100 (ENSMMSG00000003308) #24	ENSMMSG00000003290 #25	CATSPERE (ENSMMSG00000003191) #26	ENSMMSG00000003153 #27	ENSMMSG00000003138 #28	HNRNPU (ENSMMSG00000002510) #29	ENSMMSG00000002446	EFCAB2 (ENSMMSG00000002421) #30	ENSMMSG00000002406	KIF26B (ENSMMSG00000002389) #31	SMYD3 (ENSMMSG00000002362) #32	TFB2M (ENSMMSG00000002316) #33	CNST (ENSMMSG00000002263) #34
Bovidae	ANCESTRAL SPECIES	15	ENSGT00390000010760	ENSGT01100000263557.A.b.b.d	ENSGT01100000263557.A.b.b.c	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00390000001157.C.kc	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00940000155028.q.a.c
Bovinae	ANCESTRAL SPECIES	12	ENSGT00390000010760	ENSGT01100000263557.A.b.b.d	ENSGT01100000263557.A.b.b.c	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00960000190292	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00940000155028.q.a.c	ENSGT01100000263504.a.b.b.b.b
Bos	ANCESTRAL SPECIES	12	ENSGT00390000010760	ENSGT01100000263557.A.b.b.d	ENSGT01100000263557.A.b.b.c	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00960000190292	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT01100000263481.n.a.b.a.a.a.a.a.b.a.a.b.a.a.b.a.b	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00940000155028.q.a.c
Bos_a	ANCESTRAL SPECIES	8	ENSGT01100000263557.A.b.b.d	ENSGT01100000263557.A.b.b.c	ENSGT01100000263480.a.b.a.a.b.a.a.a.b	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00960000190292	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT01100000263481.n.a.b.a.a.a.a.a.b.a.a.b.a.a.b.a.b	ENSGT00940000161909	ENSGT00390000002172.A.b	ENSGT00510000048856.A	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33
Domestic yak	MODERN SPECIES	5	ENSBGRG00000013992	ENSBGRG00000013968	RGS7 (ENSBGRG00000012889) #8	FH (ENSBGRG00000012621) #9	KMO (ENSBGRG00000012289) #10	CHML (ENSBGRG00000012256)	WDR64 (ENSBGRG00000011821) #12	EXO1 (ENSBGRG00000011413) #14	MAP1LC3C (ENSBGRG00000011311) #15	BECN2 (ENSBGRG00000011233) #16	PLD5 (ENSBGRG00000010829) #18	CEP170 (ENSBGRG00000010480) #19	ENSBGRG00000010418	SDCCAG8 (ENSBGRG00000010070) #20	AKT3 (ENSBGRG00000009711) #21	ZBTB18 (ENSBGRG00000009638) #22	ENSBGRG00000009623	C1orf100 (ENSBGRG00000009512) #24	ADSS2 (ENSBGRG00000009393) #25	ENSBGRG00000009367	CATSPERE (ENSBGRG00000009169) #26	DESI2 (ENSBGRG00000009112) #27	COX20 (ENSBGRG00000009065) #28	HNRNPU (ENSBGRG00000007853) #29	ENSBGRG00000007746	ENSBGRG00000007708	EFCAB2 (ENSBGRG00000007527) #30	KIF26B (ENSBGRG00000007186) #31	SMYD3 (ENSBGRG00000006939) #32	TFB2M (ENSBGRG00000006812) #33	CNST (ENSBGRG00000006731) #34
Wild yak	MODERN SPECIES	2728																ENSBMUG00000007486 #22	C1orf100 (ENSBMUG00000007471) #24	ADSS (ENSBMUG00000007466) #25	ENSBMUG00000007462	CATSPERE (ENSBMUG00000007447) #26	DESI2 (ENSBMUG00000007407) #27	COX20 (ENSBMUG00000007383) #28	HNRNPU (ENSBMUG00000007365) #29	ENSBMUG00000007328 #29	ENSBMUG00000007304	EFCAB2 (ENSBMUG00000007294) #30	KIF26B (ENSBMUG00000007283) #31
Bos_b	ANCESTRAL SPECIES	9	ENSGT00390000010760	ENSGT01100000263557.A.b.b.d	ENSGT01100000263557.A.b.b.c	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT01100000263481.n.a.b.a.a.a.a.a.b.a.a.b.a.a.b.a.b	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00940000155028.q.a.c	ENSGT01100000263504.a.b.b.b.b
Hybrid Bos Indicus	MODERN SPECIES	7	ENSBIXG00005024063	ENSBIXG00005024089	ENSBIXG00005024125	RGS7 (ENSBIXG00005024288) #8	FH (ENSBIXG00005004166) #9	KMO (ENSBIXG00005024440) #10	CHML (ENSBIXG00005024458)	WDR64 (ENSBIXG00005024607) #12	EXO1 (ENSBIXG00005024677) #14	MAP1LC3C (ENSBIXG00005024701) #15	BECN2 (ENSBIXG00005024712) #16	PLD5 (ENSBIXG00005024812) #18	CEP170 (ENSBIXG00005025170) #19	SDCCAG8 (ENSBIXG00005025302) #20	AKT3 (ENSBIXG00005025439) #21	ZBTB18 (ENSBIXG00005004344) #22	C1orf100 (ENSBIXG00005025567) #24	ADSS2 (ENSBIXG00005004358) #25	ENSBIXG00005025604	ENSBIXG00005025613	CATSPERE (ENSBIXG00005025657) #26	DESI2 (ENSBIXG00005004387) #27	COX20 (ENSBIXG00005025757) #28	HNRNPU (ENSBIXG00005025914) #29	ENSBIXG00005025963	ENSBIXG00005004429	EFCAB2 (ENSBIXG00005026031) #30	ENSBIXG00005026044	KIF26B (ENSBIXG00005026077) #31	ENSBIXG00005026111	SMYD3 (ENSBIXG00005026141) #32
Cow	MODERN SPECIES	7	XCL1 (ENSBTAG00000009938)	ENSBTAG00000009943	ENSBTAG00000053912	RGS7 (ENSBTAG00000005410) #8	FH (ENSBTAG00000021688) #9	KMO (ENSBTAG00000014439) #10	CHML (ENSBTAG00000010803)	WDR64 (ENSBTAG00000005200) #12	EXO1 (ENSBTAG00000009396) #14	MAP1LC3C (ENSBTAG00000012462) #15	BECN2 (ENSBTAG00000013700) #16	PLD5 (ENSBTAG00000033056) #18	CEP170 (ENSBTAG00000007566) #19	SDCCAG8 (ENSBTAG00000017775) #20	AKT3 (ENSBTAG00000017788) #21	ZBTB18 (ENSBTAG00000000385) #22	C16H1orf100 (ENSBTAG00000033127) #24	ADSS2 (ENSBTAG00000013885) #25	ENSBTAG00000044066 #26	DESI2 (ENSBTAG00000001478) #27	COX20 (ENSBTAG00000033136) #28	HNRNPU (ENSBTAG00000007606) #29	ENSBTAG00000047437	EFCAB2 (ENSBTAG00000024555) #30	KIF26B (ENSBTAG00000012715) #31	SMYD3 (ENSBTAG00000033180) #32	TFB2M (ENSBTAG00000000072) #33	CNST (ENSBTAG00000000511) #34	ENSBTAG00000021109	H3-3D (ENSBTAG00000011508)	SCCPDH (ENSBTAG00000003804) #35
American bison	MODERN SPECIES	3231	C17orf67 (ENSBBBG00000011112)	DGKE (ENSBBBG00000011124)	TRIM25 (ENSBBBG00000011147)	COIL (ENSBBBG00000002010)	SCPEP1 (ENSBBBG00000011172)	ENSBBBG00000008095	ENSBBBG00000007968	ENSBBBG00000006832	ENSBBBG00000011190	CCDC182 (ENSBBBG00000011196)	ENSBBBG00000011204	MRPS23 (ENSBBBG00000002034)	CUEDC1 (ENSBBBG00000008544)	VEZF1 (ENSBBBG00000008437)	SRSF1 (ENSBBBG00000011276)	ZBTB18 (ENSBBBG00000002053) #22	C1orf100 (ENSBBBG00000011297) #24	ADSS2 (ENSBBBG00000011309) #25	ENSBBBG00000011316	CATSPERE (ENSBBBG00000002070) #26	DESI2 (ENSBBBG00000011390) #27	COX20 (ENSBBBG00000011393) #28	HNRNPU (ENSBBBG00000011529) #29	ENSBBBG00000011558	EFCAB2 (ENSBBBG00000007121) #30	KIF26B (ENSBBBG00000011611) #31	SMYD3 (ENSBBBG00000011655) #32	TFB2M (ENSBBBG00000011663) #33	CNST (ENSBBBG00000011683) #34	ENSBBBG00000002158	ENSBBBG00000011707
Caprinae	ANCESTRAL SPECIES	12	ENSGT01030000234579.C	ENSGT00390000010760	ENSGT01100000263557.A.b.b.d	ENSGT01100000263557.A.b.b.c	ENSGT00940000156661.j #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00390000001157.C.kc	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT01100000263504.a.b.b.b.b	ENSGT00390000004799 #35
Rambouillet Sheep	MODERN SPECIES	3	ATP1B1 (ENSOARG00020007736)	DPT (ENSOARG00020007710)	ENSOARG00020007688	XCL1 (ENSOARG00020007666)	ENSOARG00020007655	RGS7 (ENSOARG00020006899) #8	FH (ENSOARG00020006418) #9	KMO (ENSOARG00020006259) #10	WDR64 (ENSOARG00020005994) #12	EXO1 (ENSOARG00020005940) #14	MAP1LC3C (ENSOARG00020005910) #15	ENSOARG00020005851	PLD5 (ENSOARG00020005705) #18	CEP170 (ENSOARG00020005464) #19	AKT3 (ENSOARG00020005210) #21	ZBTB18 (ENSOARG00020005168) #22	C1orf100 (ENSOARG00020005127) #24	ENSOARG00020005105 #25	ENSOARG00020005072 #26	DESI2 (ENSOARG00020005026) #27	COX20 (ENSOARG00020004998) #28	HNRNPU (ENSOARG00020004518) #29	ENSOARG00020004467	EFCAB2 (ENSOARG00020004432) #30	KIF26B (ENSOARG00020004096) #31	ENSOARG00020004035	SMYD3 (ENSOARG00020003928) #32	TFB2M (ENSOARG00020003896) #33	ENSOARG00020003854	SCCPDH (ENSOARG00020003810) #35	ENSOARG00020003724
Goat	MODERN SPECIES	7	DPT (ENSCHIG00000014401)	ENSCHIG00000025827	ENSCHIG00000017060	ENSCHIG00000024203 #8	ENSCHIG00000016226 #8	FH (ENSCHIG00000003286) #9	KMO (ENSCHIG00000018212) #10	CHML (ENSCHIG00000002071)	WDR64 (ENSCHIG00000018653) #12	EXO1 (ENSCHIG00000013001) #14	MAP1LC3C (ENSCHIG00000024130) #15	PLD5 (ENSCHIG00000017711) #18	CEP170 (ENSCHIG00000026612) #19	SDCCAG8 (ENSCHIG00000017782) #20	AKT3 (ENSCHIG00000025145) #21	ENSCHIG00000016215 #22	C1orf100 (ENSCHIG00000003781) #24	ADSS2 (ENSCHIG00000019431) #25	ENSCHIG00000010596 #26	DESI2 (ENSCHIG00000020086) #27	ENSCHIG00000014790 #28	HNRNPU (ENSCHIG00000004900) #29	ENSCHIG00000011421	EFCAB2 (ENSCHIG00000013755) #30	KIF26B (ENSCHIG00000026425) #31	SMYD3 (ENSCHIG00000019856) #32	ENSCHIG00000013167 #32	ENSCHIG00000024072	TFB2M (ENSCHIG00000017458) #33	CNST (ENSCHIG00000011991) #34	ENSCHIG00000022887
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.b	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Carnivora	ANCESTRAL SPECIES	14	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.d #15	ENSGT00390000008164.d #16	ENSGT00940000161852.c #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.b	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Caniformia	ANCESTRAL SPECIES	10	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.d #15	ENSGT00390000008164.d #16	ENSGT00940000161852.c #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Canidae	ANCESTRAL SPECIES	1	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00390000009320.eb.a	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852.d #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Canis_lupus	ANCESTRAL SPECIES	4	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00390000009320.eb.a	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852.d #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00950000183029.B.c.b.b.b.i.b	ENSGT00940000178689	ENSGT00390000018900
Dog	MODERN SPECIES	35	FH (ENSCAFG00845004348) #9	KMO (ENSCAFG00845004366) #10	OPN3 (ENSCAFG00845004379) #11	CHML (ENSCAFG00845004391)	WDR64 (ENSCAFG00845004435) #12	ENSCAFG00845004494	ENSCAFG00845004504	EXO1 (ENSCAFG00845004521) #14	BECN2 (ENSCAFG00845004546) #16	MAP1LC3C (ENSCAFG00845004557) #15	PLD5 (ENSCAFG00845004571) #18	ENSCAFG00845004592	CEP170 (ENSCAFG00845004652) #19	SDCCAG8 (ENSCAFG00845004779) #20	AKT3 (ENSCAFG00845004858) #21	ZBTB18 (ENSCAFG00845004904) #22	C7H1orf100 (ENSCAFG00845005216) #24	ADSS2 (ENSCAFG00845005250) #25	CATSPERE (ENSCAFG00845005306) #26	DESI2 (ENSCAFG00845005415) #27	ENSCAFG00845005435 #28	HNRNPU (ENSCAFG00845005509) #29	ENSCAFG00845005646 #30	KIF26B (ENSCAFG00845005694) #31	SMYD3 (ENSCAFG00845005785) #32	TFB2M (ENSCAFG00845005847) #33	CNST (ENSCAFG00845005933) #34	SCCPDH (ENSCAFG00845006130) #35	ENSCAFG00845006160	ENSCAFG00845006225	AHCTF1 (ENSCAFG00845006427)
Dingo	MODERN SPECIES	271	RGS7 (ENSCAFG00020023079) #8	FH (ENSCAFG00020023252) #9	KMO (ENSCAFG00020023261) #10	ENSCAFG00020023269 #11	ENSCAFG00020023277 #11	ENSCAFG00020023286 #12	ENSCAFG00020000198	EXO1 (ENSCAFG00020000260) #14	ENSCAFG00020000314 #16	MAP1LC3C (ENSCAFG00020000378) #15	PLD5 (ENSCAFG00020000394) #18	ENSCAFG00020000451	CEP170 (ENSCAFG00020000490) #19	SDCCAG8 (ENSCAFG00020000770) #20	AKT3 (ENSCAFG00020000778) #21	ZBTB18 (ENSCAFG00020000800) #22	C1orf100 (ENSCAFG00020000808) #24	ADSS2 (ENSCAFG00020000812) #25	ENSCAFG00020000834 #26	DESI2 (ENSCAFG00020000895) #27	COX20 (ENSCAFG00020000902) #28	HNRNPU (ENSCAFG00020000918) #29	ENSCAFG00020000931 #30	KIF26B (ENSCAFG00020000955) #31	ENSCAFG00020001053 #32	TFB2M (ENSCAFG00020001084) #33	CNST (ENSCAFG00020001096) #34	SCCPDH (ENSCAFG00020001113) #35	ENSCAFG00020001153	ENSCAFG00020001167	AHCTF1 (ENSCAFG00020001201)
Red fox	MODERN SPECIES	45	ENSVVUG00000026384	ENSVVUG00000026387	GREM2 (ENSVVUG00000026390) #7	RGS7 (ENSVVUG00000026398) #8	FH (ENSVVUG00000026414) #9	KMO (ENSVVUG00000026416) #10	OPN3 (ENSVVUG00000026420) #11	WDR64 (ENSVVUG00000026426) #12	ENSVVUG00000026430	EXO1 (ENSVVUG00000026435) #14	MAP1LC3C (ENSVVUG00000026440) #15	PLD5 (ENSVVUG00000026443) #18	CEP170 (ENSVVUG00000026459) #19	SDCCAG8 (ENSVVUG00000026484) #20	AKT3 (ENSVVUG00000026493) #21	ZBTB18 (ENSVVUG00000026495) #22	ENSVVUG00000026500	C1orf100 (ENSVVUG00000026502) #24	ADSS (ENSVVUG00000026505) #25	CATSPERE (ENSVVUG00000026515) #26	DESI2 (ENSVVUG00000026519) #27	COX20 (ENSVVUG00000026522) #28	HNRNPU (ENSVVUG00000026524) #29	EFCAB2 (ENSVVUG00000026538) #30	KIF26B (ENSVVUG00000000074) #31	ENSVVUG00000000542 #32	ENSVVUG00000000650 #33	CNST (ENSVVUG00000000780) #34	SCCPDH (ENSVVUG00000000879) #35	AHCTF1 (ENSVVUG00000000955)	CDC42BPA (ENSVVUG00000001137)
Caniformia_b	ANCESTRAL SPECIES	8	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.d #15	ENSGT00390000008164.d #16	ENSGT00940000161852.c #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Ursidae	ANCESTRAL SPECIES	4	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.d #15	ENSGT00390000008164.d #16	ENSGT00940000161852.c #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000161606.d	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Ursus	ANCESTRAL SPECIES	90	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.d #15	ENSGT00390000008164.d #16	ENSGT00940000161852.c #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000161606.d	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158.z #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b	ENSGT00940000156810
American black bear	MODERN SPECIES	1563																ZBTB18 (ENSUAMG00000027701) #22
Polar bear	MODERN SPECIES	99	RGS7 (ENSUMAG00000011615) #8	FH (ENSUMAG00000011655) #9	KMO (ENSUMAG00000011665) #10	ENSUMAG00000011682 #11	ENSUMAG00000011686	ENSUMAG00000011692 #12	ENSUMAG00000011733 #12	EXO1 (ENSUMAG00000011743) #14	ENSUMAG00000011753 #15	BECN2 (ENSUMAG00000011758) #16	ENSUMAG00000011763 #15	PLD5 (ENSUMAG00000011776) #18	CEP170 (ENSUMAG00000011791) #19	SDCCAG8 (ENSUMAG00000011811) #20	AKT3 (ENSUMAG00000011832) #21	ZBTB18 (ENSUMAG00000011860) #22	C1orf100 (ENSUMAG00000011873) #24	ADSS2 (ENSUMAG00000011932) #25	ENSUMAG00000012197 #26	DESI2 (ENSUMAG00000012207) #27	ENSUMAG00000012218 #28	HNRNPU (ENSUMAG00000012322) #29	EFCAB2 (ENSUMAG00000013304) #30	ENSUMAG00000013317 #32	ENSUMAG00000013322	TFB2M (ENSUMAG00000013324) #33	ENSUMAG00000013325	SCCPDH (ENSUMAG00000013328) #35	ENSUMAG00000013333	AHCTF1 (ENSUMAG00000013411)	CDC42BPA (ENSUMAG00000014320)
Giant Panda	MODERN SPECIES	18	GREM2 (ENSAMEG00000030827) #7	RGS7 (ENSAMEG00000014028) #8	FH (ENSAMEG00000013995) #9	KMO (ENSAMEG00000013965) #10	OPN3 (ENSAMEG00000013961) #11	WDR64 (ENSAMEG00000013942) #12	EXO1 (ENSAMEG00000013934) #14	ENSAMEG00000013927 #15	BECN2 (ENSAMEG00000018816) #16	ENSAMEG00000013919 #15	PLD5 (ENSAMEG00000013913) #18	CEP170 (ENSAMEG00000018213) #19	ENSAMEG00000024848	SDCCAG8 (ENSAMEG00000009331) #20	AKT3 (ENSAMEG00000009273) #21	ZBTB18 (ENSAMEG00000019750) #22	C1orf100 (ENSAMEG00000009269) #24	ADSS2 (ENSAMEG00000009234) #25	CATSPERE (ENSAMEG00000009228) #26	DESI2 (ENSAMEG00000027766) #27	COX20 (ENSAMEG00000026571) #28	HNRNPU (ENSAMEG00000009145) #29	EFCAB2 (ENSAMEG00000009139) #30	KIF26B (ENSAMEG00000009119) #31	SMYD3 (ENSAMEG00000006619) #32	TFB2M (ENSAMEG00000006593) #33	CNST (ENSAMEG00000006589) #34	SCCPDH (ENSAMEG00000006562) #35	ENSAMEG00000029183	ENSAMEG00000006501	ENSAMEG00000008890
Mustelinae	ANCESTRAL SPECIES	88	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661.l #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852.c #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
American mink	MODERN SPECIES	43		GREM2 (ENSNVIG00000001817) #7	ENSNVIG00000001835 #8	FH (ENSNVIG00000002008) #9	KMO (ENSNVIG00000002024) #10	ENSNVIG00000002073 #11	CHML (ENSNVIG00000002080)	WDR64 (ENSNVIG00000002088) #12	EXO1 (ENSNVIG00000002104) #14	BECN2 (ENSNVIG00000002160) #16	MAP1LC3C (ENSNVIG00000002161) #15	PLD5 (ENSNVIG00000002170) #18	CEP170 (ENSNVIG00000002232) #19	SDCCAG8 (ENSNVIG00000002442) #20	AKT3 (ENSNVIG00000002948) #21	ZBTB18 (ENSNVIG00000002964) #22	C1orf100 (ENSNVIG00000002977) #24	ADSS2 (ENSNVIG00000003006) #25	CATSPERE (ENSNVIG00000003022) #26	DESI2 (ENSNVIG00000003153) #27	COX20 (ENSNVIG00000003195) #28	HNRNPU (ENSNVIG00000003228) #29	EFCAB2 (ENSNVIG00000003367) #30	KIF26B (ENSNVIG00000003416) #31	SMYD3 (ENSNVIG00000003474) #32	TFB2M (ENSNVIG00000003533) #33	CNST (ENSNVIG00000003578) #34	SCCPDH (ENSNVIG00000003629) #35	ENSNVIG00000003647	AHCTF1 (ENSNVIG00000003655)	CDC42BPA (ENSNVIG00000003776)
Ferret	MODERN SPECIES	217	ENSMPUG00000015693	RGS7 (ENSMPUG00000015695) #8	FH (ENSMPUG00000015697) #9	KMO (ENSMPUG00000015699) #10	OPN3 (ENSMPUG00000015703) #11	WDR64 (ENSMPUG00000015708) #12	EXO1 (ENSMPUG00000015709) #14	BECN2 (ENSMPUG00000015713) #16	MAP1LC3C (ENSMPUG00000015717) #15	PLD5 (ENSMPUG00000015720) #18	ENSMPUG00000015721	ENSMPUG00000015722	CEP170 (ENSMPUG00000015723) #19	SDCCAG8 (ENSMPUG00000015725) #20	AKT3 (ENSMPUG00000015730) #21	ZBTB18 (ENSMPUG00000015734) #22	C1orf100 (ENSMPUG00000015737) #24	ADSS2 (ENSMPUG00000015741) #25	CATSPERE (ENSMPUG00000015745) #26	DESI2 (ENSMPUG00000015748) #27	ENSMPUG00000015750 #28	HNRNPU (ENSMPUG00000015752) #29	EFCAB2 (ENSMPUG00000015784) #30	KIF26B (ENSMPUG00000015788) #31	SMYD3 (ENSMPUG00000015806) #32	ENSMPUG00000015808 #32	TFB2M (ENSMPUG00000015810) #33	CNST (ENSMPUG00000015813) #34	SCCPDH (ENSMPUG00000015815) #35	ENSMPUG00000015817	ENSMPUG00000015818
Felidae	ANCESTRAL SPECIES	11	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.d.a #15	ENSGT00390000008164.d #16	ENSGT00940000161852.c #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.b	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Panthera	ANCESTRAL SPECIES	19	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.d.a #15	ENSGT00390000008164.d #16	ENSGT00940000161852.c #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.b	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Panthera_a	ANCESTRAL SPECIES	19	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.d.a #15	ENSGT00390000008164.d #16	ENSGT00940000161852.c #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.b	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
leopard	MODERN SPECIES	4	FMN2 (ENSPPRG00000007138)	GREM2 (ENSPPRG00000018431) #7	ENSPPRG00000009269	RGS7 (ENSPPRG00000011889) #8	FH (ENSPPRG00000012319) #9	KMO (ENSPPRG00000015898) #10	OPN3 (ENSPPRG00000016394) #11	WDR64 (ENSPPRG00000000202) #12	EXO1 (ENSPPRG00000002261) #14	ENSPPRG00000002695 #15	ENSPPRG00000003284 #15	PLD5 (ENSPPRG00000004006) #18	CEP170 (ENSPPRG00000005786) #19	SDCCAG8 (ENSPPRG00000006575) #20	AKT3 (ENSPPRG00000008984) #21	ZBTB18 (ENSPPRG00000009151) #22	C1orf100 (ENSPPRG00000009331) #24	ADSS2 (ENSPPRG00000009968) #25	CATSPERE (ENSPPRG00000013157) #26	DESI2 (ENSPPRG00000015454) #27	ENSPPRG00000016002 #28	HNRNPU (ENSPPRG00000002662) #29	EFCAB2 (ENSPPRG00000003970) #30	ENSPPRG00000005048	KIF26B (ENSPPRG00000005611) #31	SMYD3 (ENSPPRG00000007149) #32	TFB2M (ENSPPRG00000007350) #33	CNST (ENSPPRG00000008188) #34	SCCPDH (ENSPPRG00000008599) #35	ENSPPRG00000009605	CDC42BPA (ENSPPRG00000024128)
lion	MODERN SPECIES	17	GREM2 (ENSPLOG00000010441) #7	ENSPLOG00000010413	RGS7 (ENSPLOG00000010068) #8	FH (ENSPLOG00000009935) #9	KMO (ENSPLOG00000009633) #10	OPN3 (ENSPLOG00000009576) #11	WDR64 (ENSPLOG00000009316) #12	EXO1 (ENSPLOG00000009218) #14	ENSPLOG00000009175 #15	BECN2 (ENSPLOG00000009097) #16	ENSPLOG00000009034 #15	PLD5 (ENSPLOG00000008930) #18	CEP170 (ENSPLOG00000008822) #19	SDCCAG8 (ENSPLOG00000008743) #20	AKT3 (ENSPLOG00000008604) #21	ZBTB18 (ENSPLOG00000008563) #22	C1orf100 (ENSPLOG00000008471) #24	ADSS2 (ENSPLOG00000008393) #25	CATSPERE (ENSPLOG00000008156) #26	DESI2 (ENSPLOG00000008117) #27	ENSPLOG00000008076 #28	HNRNPU (ENSPLOG00000007884) #29	EFCAB2 (ENSPLOG00000007794) #30	KIF26B (ENSPLOG00000007502) #31	SMYD3 (ENSPLOG00000007373) #32	TFB2M (ENSPLOG00000007355) #33	CNST (ENSPLOG00000007297) #34	SCCPDH (ENSPLOG00000007254) #35	ENSPLOG00000007118	AHCTF1 (ENSPLOG00000006807)	CDC42BPA (ENSPLOG00000006680)
Tiger	MODERN SPECIES	95	TADA1 (ENSPTIG00000008050)	POGK (ENSPTIG00000005898)	ENSPTIG00000020273	GREM2 (ENSPTIG00000019773) #7	RGS7 (ENSPTIG00000014826) #8	FH (ENSPTIG00000012588) #9	KMO (ENSPTIG00000007560) #10	OPN3 (ENSPTIG00000007030) #11	WDR64 (ENSPTIG00000018586) #12	EXO1 (ENSPTIG00000015769) #14	MAP1LC3C (ENSPTIG00000015165) #15	PLD5 (ENSPTIG00000013519) #18	CEP170 (ENSPTIG00000011961) #19	SDCCAG8 (ENSPTIG00000008829) #20	AKT3 (ENSPTIG00000021068) #21	ZBTB18 (ENSPTIG00000020181) #22	C1orf100 (ENSPTIG00000019529) #24	ADSS2 (ENSPTIG00000018415) #25	CATSPERE (ENSPTIG00000013424) #26	DESI2 (ENSPTIG00000011692) #27	COX20 (ENSPTIG00000011303) #28	HNRNPU (ENSPTIG00000020150) #29	EFCAB2 (ENSPTIG00000019824) #30	ENSPTIG00000018837	KIF26B (ENSPTIG00000017769) #31	SMYD3 (ENSPTIG00000017118) #32
Cat	MODERN SPECIES	248	RGS7 (ENSFCAG00000001325) #8	FH (ENSFCAG00000005490) #9	KMO (ENSFCAG00000004150) #10	OPN3 (ENSFCAG00000034971) #11	WDR64 (ENSFCAG00000013338) #12	EXO1 (ENSFCAG00000013339) #14	ENSFCAG00000036292 #15	ENSFCAG00000013340 #16	ENSFCAG00000040996 #15	ENSFCAG00000052716	ENSFCAG00000051650	PLD5 (ENSFCAG00000009424) #18	CEP170 (ENSFCAG00000026540) #19	SDCCAG8 (ENSFCAG00000038761) #20	AKT3 (ENSFCAG00000003700) #21	ZBTB18 (ENSFCAG00000043987) #22	C1orf100 (ENSFCAG00000041166) #24	ADSS2 (ENSFCAG00000025698) #25	CATSPERE (ENSFCAG00000042283) #26	DESI2 (ENSFCAG00000026628) #27	ENSFCAG00000049403	COX20 (ENSFCAG00000036373) #28	HNRNPU (ENSFCAG00000002156) #29	EFCAB2 (ENSFCAG00000029971) #30	KIF26B (ENSFCAG00000022128) #31	SMYD3 (ENSFCAG00000038120) #32	TFB2M (ENSFCAG00000021951) #33	CNST (ENSFCAG00000028075) #34	SCCPDH (ENSFCAG00000010642) #35	ENSFCAG00000024485	AHCTF1 (ENSFCAG00000014392)
Laurasiatheria_c	ANCESTRAL SPECIES	25	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Equus	ANCESTRAL SPECIES	41	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.f #15	ENSGT00390000008164.d #16	ENSGT00940000161852.e #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29
Donkey	MODERN SPECIES	23	RGS7 (ENSEASG00005003257) #8	FH (ENSEASG00005003252) #9	KMO (ENSEASG00005003187) #10	OPN3 (ENSEASG00005003173) #11	CHML (ENSEASG00005037865)	WDR64 (ENSEASG00005003164) #12	EXO1 (ENSEASG00005003159) #14	BECN2 (ENSEASG00005003154) #16	ENSEASG00005030566 #15	PLD5 (ENSEASG00005003142) #18	ENSEASG00005035739	ENSEASG00005003123 #19	ENSEASG00005026305 #19	SDCCAG8 (ENSEASG00005003097) #20	AKT3 (ENSEASG00005003090) #21	ZBTB18 (ENSEASG00005030332) #22	C1orf100 (ENSEASG00005026609) #24	ADSS2 (ENSEASG00005003054) #25	CATSPERE (ENSEASG00005036663) #26	DESI2 (ENSEASG00005003022) #27	COX20 (ENSEASG00005024069) #28	ENSEASG00005003017 #29
Horse	MODERN SPECIES	23	FH (ENSECAG00000020726) #9	KMO (ENSECAG00000015341) #10	CHML (ENSECAG00000049917)	OPN3 (ENSECAG00000014947) #11	WDR64 (ENSECAG00000007512) #12	EXO1 (ENSECAG00000018322) #14	ENSECAG00000047917 #15	BECN2 (ENSECAG00000017996) #16	ENSECAG00000037253 #15	PLD5 (ENSECAG00000015845) #18	ENSECAG00000052988	ENSECAG00000049767	CEP170 (ENSECAG00000012163) #19	SDCCAG8 (ENSECAG00000008477) #20	AKT3 (ENSECAG00000019722) #21	ZBTB18 (ENSECAG00000033381) #22	C30H1orf100 (ENSECAG00000016894) #24	ADSS2 (ENSECAG00000010744) #25	ENSECAG00000041634	ENSECAG00000056420	CATSPERE (ENSECAG00000008228) #26	DESI2 (ENSECAG00000008142) #27	COX20 (ENSECAG00000008125) #28	HNRNPU (ENSECAG00000007955) #29	ENSECAG00000052008
Chiroptera	ANCESTRAL SPECIES	30	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000178689	ENSGT00390000018900	ENSGT01030000234517.H.b
Megabat	MODERN SPECIES	6556																ZBTB18 (ENSPVAG00000011441) #22
Microchiroptera	ANCESTRAL SPECIES	32	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000178689	ENSGT00390000018900	ENSGT01030000234517.H.b
Greater horseshoe bat	MODERN SPECIES	19	CHRM3 (ENSRFEG00010020303)	ENSRFEG00010020281	ENSRFEG00010020220	GREM2 (ENSRFEG00010020207) #7	RGS7 (ENSRFEG00010019674) #8	FH (ENSRFEG00010019556) #9	KMO (ENSRFEG00010019488) #10	OPN3 (ENSRFEG00010019426) #11	WDR64 (ENSRFEG00010019065) #12	EXO1 (ENSRFEG00010018853) #14	BECN2 (ENSRFEG00010018835) #16	MAP1LC3C (ENSRFEG00010018764) #15	PLD5 (ENSRFEG00010018644) #18	CEP170 (ENSRFEG00010018444) #19	SDCCAG8 (ENSRFEG00010018345) #20	ENSRFEG00010018172 #22	C1orf100 (ENSRFEG00010018065) #24	ADSS2 (ENSRFEG00010018012) #25	ENSRFEG00010018000	CATSPERE (ENSRFEG00010017401) #26	DESI2 (ENSRFEG00010017267) #27	COX20 (ENSRFEG00010017225) #28	HNRNPU (ENSRFEG00010016043) #29	EFCAB2 (ENSRFEG00010015981) #30	KIF26B (ENSRFEG00010015778) #31	SMYD3 (ENSRFEG00010015677) #32	TFB2M (ENSRFEG00010015650) #33	CNST (ENSRFEG00010015524) #34	SCCPDH (ENSRFEG00010015433) #35	ENSRFEG00010015342	AHCTF1 (ENSRFEG00010015223)
Microbat	MODERN SPECIES	1510																ZBTB18 (ENSMLUG00000011285) #22	C1orf100 (ENSMLUG00000002740) #24	ADSS2 (ENSMLUG00000017320) #25
Atlantogenata	ANCESTRAL SPECIES	44	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b	ENSGT00940000156810
Afrotheria	ANCESTRAL SPECIES	47	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900	ENSGT01030000234517.H.b	ENSGT00940000156810
Afrotheria_a	ANCESTRAL SPECIES	48	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00390000008164.d #16	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b.`b #19	ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900	ENSGT01030000234517.H.b	ENSGT00940000156810
Elephant	MODERN SPECIES	126	GREM2 (ENSLAFG00000031925) #7	RGS7 (ENSLAFG00000009882) #8	FH (ENSLAFG00000005727) #9	KMO (ENSLAFG00000009991) #10	OPN3 (ENSLAFG00000009994) #11	WDR64 (ENSLAFG00000009998) #12	EXO1 (ENSLAFG00000001542) #14	ENSLAFG00000030313 #15	BECN2 (ENSLAFG00000001543) #16	ENSLAFG00000015922 #15	PLD5 (ENSLAFG00000015925) #18	ENSLAFG00000012274	CEP170 (ENSLAFG00000004889) #19	ENSLAFG00000016926 #20	AKT3 (ENSLAFG00000016937) #21	ZBTB18 (ENSLAFG00000002879) #22	C1orf100 (ENSLAFG00000025946) #24	ENSLAFG00000002097 #25	CATSPERE (ENSLAFG00000015299) #26	DESI2 (ENSLAFG00000005264) #27	HNRNPU (ENSLAFG00000021377) #29	EFCAB2 (ENSLAFG00000004376) #30	KIF26B (ENSLAFG00000016491) #31	ENSLAFG00000027832	ENSLAFG00000009695 #32	TFB2M (ENSLAFG00000015061) #33	CNST (ENSLAFG00000016089) #34	SCCPDH (ENSLAFG00000001357) #35	AHCTF1 (ENSLAFG00000009243)	CDC42BPA (ENSLAFG00000002527)	COQ8A (ENSLAFG00000002525)
Xenarthra	ANCESTRAL SPECIES	397														ENSGT00730000111198 #20	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30
Armadillo	MODERN SPECIES	626														SDCCAG8 (ENSDNOG00000016334) #20	AKT3 (ENSDNOG00000016337) #21	ZBTB18 (ENSDNOG00000009334) #22	C1orf100 (ENSDNOG00000007513) #24	ADSS2 (ENSDNOG00000004228) #25	ENSDNOG00000003459 #26	DESI2 (ENSDNOG00000043692) #27	ENSDNOG00000044183	HNRNPU (ENSDNOG00000000215) #29	EFCAB2 (ENSDNOG00000032002) #30
Marsupialia	ANCESTRAL SPECIES	3	ENSGT00940000154289.B	ENSGT01030000235112	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Opossum	MODERN SPECIES	1	RGS7 (ENSMODG00000007084) #8	ENSMODG00000007027	FH (ENSMODG00000007014) #9	KMO (ENSMODG00000006989) #10	OPN3 (ENSMODG00000006943) #11	WDR64 (ENSMODG00000006929) #12	EXO1 (ENSMODG00000006877) #14	MAP1LC3C (ENSMODG00000006842) #15	PLD5 (ENSMODG00000006817) #18	ENSMODG00000006765	ENSMODG00000051185	CEP170 (ENSMODG00000006701) #19	ENSMODG00000006642	AKT3 (ENSMODG00000006626) #21	ENSMODG00000041193	ZBTB18 (ENSMODG00000006570) #22	ENSMODG00000006566 #24	ENSMODG00000006559 #25	ENSMODG00000041647	ENSMODG00000024668 #26	DESI2 (ENSMODG00000006533) #27	COX20 (ENSMODG00000024669) #28	HNRNPU (ENSMODG00000006515) #29	ENSMODG00000041630 #30	KIF26B (ENSMODG00000006420) #31	ENSMODG00000006404 #32	ENSMODG00000040525	ENSMODG00000038289 #33	ENSMODG00000043627	CNST (ENSMODG00000006372) #34	SCCPDH (ENSMODG00000006356) #35
Marsupialia_b	ANCESTRAL SPECIES	6	ENSGT00940000154289.B	ENSGT01030000235112	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b
Diprotodontia	ANCESTRAL SPECIES	7	ENSGT00940000154289.B	ENSGT01030000235112	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b	ENSGT00940000156810
Diprotodontia_a	ANCESTRAL SPECIES	3	ENSGT00940000154289.B	ENSGT01030000235112	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00950000183122.A #9	ENSGT00390000000747 #10	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852 #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT01030000234517.H.b	ENSGT00940000156810
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1035	ENSVURG00010015237	ENSVURG00010015242 #7	ENSVURG00010015280 #8	ENSVURG00010015445 #9	ENSVURG00010015455 #10	ENSVURG00010015474 #11	ENSVURG00010015486 #11	ENSVURG00010015501 #12	ENSVURG00010015550 #14	ENSVURG00010015571 #15	ENSVURG00010015591 #18	ENSVURG00010015620 #19	ENSVURG00010015668	ENSVURG00010015704	ENSVURG00010015721 #21	ENSVURG00010015741 #22	ENSVURG00010015758 #25	ENSVURG00010015784 #27	ENSVURG00010015810 #28	ENSVURG00010015813 #29	ENSVURG00010015829 #30	ENSVURG00010015854 #31	ENSVURG00010015887	ENSVURG00010015901	ENSVURG00010015915 #33	ENSVURG00010015925 #34	ENSVURG00010015938 #35	ENSVURG00010015965	ENSVURG00010016001	ENSVURG00010016076	ENSVURG00010016090
Common wonbat	MODERN SPECIES	1035	ENSVURG00010007108	ENSVURG00010007131	ENSVURG00010007138 #7	ENSVURG00010007185 #8	ENSVURG00010007331 #9	ENSVURG00010007345 #10	ENSVURG00010007372 #11	ENSVURG00010007423 #12	ENSVURG00010007516 #14	ENSVURG00010007529 #15	ENSVURG00010007551 #18	ENSVURG00010007584 #19	ENSVURG00010007635	ENSVURG00010007701	ENSVURG00010007733 #21	ENSVURG00010007765 #22	ENSVURG00010007786 #25	ENSVURG00010007837 #27	ENSVURG00010007884	ENSVURG00010007891 #28	ENSVURG00010007907 #29	ENSVURG00010008004 #30	ENSVURG00010008115 #31	ENSVURG00010008148 #32	ENSVURG00010008261	ENSVURG00010008263	ENSVURG00010008267	ENSVURG00010008296	ENSVURG00010008362 #33	ENSVURG00010008373 #34	ENSVURG00010008421 #35
koala	MODERN SPECIES	12	CHRM3 (ENSPCIG00000000352)	ENSPCIG00000035163	ENSPCIG00000030768	GREM2 (ENSPCIG00000030902) #7	RGS7 (ENSPCIG00000003865) #8	FH (ENSPCIG00000000056) #9	KMO (ENSPCIG00000000055) #10	OPN3 (ENSPCIG00000000054) #11	WDR64 (ENSPCIG00000000053) #12	EXO1 (ENSPCIG00000000052) #14	PLD5 (ENSPCIG00000000048) #18	ENSPCIG00000022932 #19	ENSPCIG00000037006 #19	ENSPCIG00000006946	AKT3 (ENSPCIG00000006957) #21	ZBTB18 (ENSPCIG00000006967) #22	ENSPCIG00000017077 #24	ENSPCIG00000017075	ADSS2 (ENSPCIG00000017074) #25	ENSPCIG00000032232 #26	DESI2 (ENSPCIG00000008632) #27	ENSPCIG00000035729	COX20 (ENSPCIG00000035475) #28	HNRNPU (ENSPCIG00000008657) #29	EFCAB2 (ENSPCIG00000013082) #30	KIF26B (ENSPCIG00000016690) #31	ENSPCIG00000003253 #32	ENSPCIG00000003263	ENSPCIG00000003268 #33	CNST (ENSPCIG00000003285) #34	SCCPDH (ENSPCIG00000003299) #35
Wallaby	MODERN SPECIES	11532																ZBTB18 (ENSMEUG00000009369) #22
Tasmanian devil	MODERN SPECIES	3	FMN2 (ENSSHAG00000020854)	ENSSHAG00000024333	GREM2 (ENSSHAG00000012022) #7	RGS7 (ENSSHAG00000008644) #8	ENSSHAG00000029198	FH (ENSSHAG00000012494) #9	KMO (ENSSHAG00000012201) #10	OPN3 (ENSSHAG00000030261) #11	WDR64 (ENSSHAG00000010684) #12	EXO1 (ENSSHAG00000010165) #14	MAP1LC3C (ENSSHAG00000027962) #15	PLD5 (ENSSHAG00000008868) #18	CEP170 (ENSSHAG00000014838) #19	ENSSHAG00000013573	AKT3 (ENSSHAG00000012342) #21	ZBTB18 (ENSSHAG00000025944) #22	ENSSHAG00000022540	ENSSHAG00000002954 #24	ADSS2 (ENSSHAG00000000865) #25	ENSSHAG00000004405 #26	ENSSHAG00000032055 #26	DESI2 (ENSSHAG00000023757) #27	COX20 (ENSSHAG00000027143) #28	HNRNPU (ENSSHAG00000025408) #29	EFCAB2 (ENSSHAG00000028679) #30	KIF26B (ENSSHAG00000015160) #31	ENSSHAG00000030450 #32	ENSSHAG00000010044 #33	CNST (ENSSHAG00000009416) #34	SCCPDH (ENSSHAG00000023977) #35	ENSSHAG00000007631
Platypus	MODERN SPECIES	10	CHRM3 (ENSOANG00000041832)	ENSOANG00000042159	ENSOANG00000045178	GREM2 (ENSOANG00000010275) #7	RGS7 (ENSOANG00000010274) #8	ENSOANG00000010273	PIGM (ENSOANG00000040171)	FH (ENSOANG00000010272) #9	KMO (ENSOANG00000010271) #10	WDR64 (ENSOANG00000010268) #12	EXO1 (ENSOANG00000043018) #14	ENSOANG00000039486 #18	CEP170 (ENSOANG00000010265) #19	ENSOANG00000010263	AKT3 (ENSOANG00000010258) #21	ZBTB18 (ENSOANG00000047323) #22	ENSOANG00000010256 #24	ADSS2 (ENSOANG00000010254) #25	DESI2 (ENSOANG00000036528) #27	COX20 (ENSOANG00000049445) #28	HNRNPU (ENSOANG00000010249) #29	ENSOANG00000049283 #30	KIF26B (ENSOANG00000010247) #31	SMYD3 (ENSOANG00000019760) #32	ENSOANG00000041467 #33	CNST (ENSOANG00000010245) #34	SCCPDH (ENSOANG00000010244) #35	AHCTF1 (ENSOANG00000010242)	CDC42BPA (ENSOANG00000010240)	COQ8A (ENSOANG00000010237)	PSEN2 (ENSOANG00000010238)
Sauria	ANCESTRAL SPECIES	1	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766.s #32	ENSGT00940000156766.t #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Lepidosauria	ANCESTRAL SPECIES		ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT01000000216868	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766.s #32	ENSGT00940000156766.t #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Episquamata	ANCESTRAL SPECIES		ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT01000000216868	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766.s #32	ENSGT00940000156766.t #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Laterata	ANCESTRAL SPECIES	4	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT01000000216868	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766.t #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT00950000182886.b.a
Common wall lizard	MODERN SPECIES	11	RYR2 (ENSPMRG00000005166)	ENSPMRG00000005950	CHRM3 (ENSPMRG00000005958)	FMN2 (ENSPMRG00000005976)	GREM2 (ENSPMRG00000006041) #7	RGS7 (ENSPMRG00000006063) #8	OPN3 (ENSPMRG00000006099) #11	WDR64 (ENSPMRG00000006118) #12	EXO1 (ENSPMRG00000006169) #14	ENSPMRG00000006221	MAP1LC3C (ENSPMRG00000006225) #15	PLD5 (ENSPMRG00000006234) #18	CEP170 (ENSPMRG00000006264) #19	ENSPMRG00000006307	AKT3 (ENSPMRG00000006354) #21	ZBTB18 (ENSPMRG00000006392) #22	ENSPMRG00000006400	ADSS2 (ENSPMRG00000006407) #25	CATSPERE (ENSPMRG00000006426) #26	DESI2 (ENSPMRG00000006448) #27	COX20 (ENSPMRG00000006456) #28	ENSPMRG00000006472 #29	ENSPMRG00000006489	ENSPMRG00000006500 #30	KIF26B (ENSPMRG00000006520) #31	ENSPMRG00000006536 #30	ENSPMRG00000006562 #29	ENSPMRG00000006577	ENSPMRG00000006584 #32	ENSPMRG00000006597 #32	TFB2M (ENSPMRG00000006607) #33
Argentine black and white tegu	MODERN SPECIES	2	ENSSMRG00000010277	CHRM3 (ENSSMRG00000010271)	FMN2 (ENSSMRG00000010270)	GREM2 (ENSSMRG00000010254) #7	RGS7 (ENSSMRG00000010248) #8	PIGM (ENSSMRG00000010223)	OPN3 (ENSSMRG00000010202) #11	ENSSMRG00000010201	WDR64 (ENSSMRG00000010200) #12	EXO1 (ENSSMRG00000010199) #14	MAP1LC3C (ENSSMRG00000010184) #15	PLD5 (ENSSMRG00000010182) #18	CEP170 (ENSSMRG00000010175) #19	ENSSMRG00000010174	AKT3 (ENSSMRG00000010166) #21	ZBTB18 (ENSSMRG00000010157) #22	ENSSMRG00000010156	ADSS2 (ENSSMRG00000010155) #25	DESI2 (ENSSMRG00000010150) #27	ENSSMRG00000010148	HNRNPU (ENSSMRG00000010145) #29	ENSSMRG00000010143	ENSSMRG00000010142 #30	KIF26B (ENSSMRG00000010140) #31	ENSSMRG00000010103 #32	ENSSMRG00000010087	ENSSMRG00000010081 #32	TFB2M (ENSSMRG00000010075) #33	CNST (ENSSMRG00000010073) #34	SCCPDH (ENSSMRG00000010070) #35	ENSSMRG00000010069
Toxicofera	ANCESTRAL SPECIES		ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766.s #32	ENSGT00940000156766.t #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Elapidae	ANCESTRAL SPECIES		ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00940000168267	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766.s #32	ENSGT00940000156766.t #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Elapidae_a	ANCESTRAL SPECIES	2	ENSGT00940000153968.a.b.a.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00940000168267	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766.s #32	ENSGT00940000156766.t #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT00950000182886.b.a
Acanthophiinae	ANCESTRAL SPECIES	3	ENSGT00940000153968.a.b.a.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00940000168267	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766.s #32	ENSGT00940000156766.t #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT00950000182886.b.a
Eastern brown snake	MODERN SPECIES	26	RYR2 (ENSPTXG00000002954)	CHRM3 (ENSPTXG00000002975)	ENSPTXG00000002977	GREM2 (ENSPTXG00000002980) #7	ENSPTXG00000002982	RGS7 (ENSPTXG00000002983) #8	OPN3 (ENSPTXG00000002985) #11	WDR64 (ENSPTXG00000002995) #12	EXO1 (ENSPTXG00000003000) #14	MAP1LC3C (ENSPTXG00000003012) #15	ENSPTXG00000003014 #18	ENSPTXG00000003018 #18	CEP170 (ENSPTXG00000003025) #19	ENSPTXG00000003069	AKT3 (ENSPTXG00000003071) #21	ZBTB18 (ENSPTXG00000003072) #22	ADSS2 (ENSPTXG00000003073) #25
Mainland tiger snake	MODERN SPECIES	28	ENSNSUG00000016890	GREM2 (ENSNSUG00000016889) #7	RGS7 (ENSNSUG00000016888) #8	OPN3 (ENSNSUG00000016887) #11	ENSNSUG00000016886 #12	ENSNSUG00000016885 #12	EXO1 (ENSNSUG00000016884) #14	MAP1LC3C (ENSNSUG00000016883) #15	ENSNSUG00000016882 #18	ENSNSUG00000016880 #18	ENSNSUG00000016879 #19	ENSNSUG00000016878 #19	ENSNSUG00000016877 #19	ENSNSUG00000016876	AKT3 (ENSNSUG00000016762) #21	ZBTB18 (ENSNSUG00000016761) #22	ADSS2 (ENSNSUG00000016760) #25	DESI2 (ENSNSUG00000016758) #27	ENSNSUG00000016757	HNRNPU (ENSNSUG00000016756) #29	EFCAB2 (ENSNSUG00000016755) #30	ENSNSUG00000016754	KIF26B (ENSNSUG00000016753) #31	ENSNSUG00000016752	ENSNSUG00000016751 #32	TFB2M (ENSNSUG00000016750) #33	CNST (ENSNSUG00000016673) #34	SCCPDH (ENSNSUG00000016671) #35	ENSNSUG00000016670	AHCTF1 (ENSNSUG00000016669)	SRD5A2 (ENSNSUG00000016668)
Blue-lipped sea krait	MODERN SPECIES	3330																ZBTB18 (ENSLLTG00000006609) #22
Indian cobra	MODERN SPECIES		ENSNNAG00000001564	ENSNNAG00000001549	ENSNNAG00000001538	GREM2 (ENSNNAG00000001521) #7	RGS7 (ENSNNAG00000001452) #8	OPN3 (ENSNNAG00000001411) #11	WDR64 (ENSNNAG00000001381) #12	EXO1 (ENSNNAG00000001347) #14	MAP1LC3C (ENSNNAG00000001315) #15	ENSNNAG00000001300 #18	ENSNNAG00000001291 #18	ENSNNAG00000001285 #18	CEP170 (ENSNNAG00000001186) #19	ENSNNAG00000001076	AKT3 (ENSNNAG00000001025) #21	ZBTB18 (ENSNNAG00000001001) #22	ADSS2 (ENSNNAG00000000962) #25	CATSPERE (ENSNNAG00000000905) #26	DESI2 (ENSNNAG00000000863) #27	HNRNPU (ENSNNAG00000000843) #29	EFCAB2 (ENSNNAG00000000820) #30	ENSNNAG00000000799	KIF26B (ENSNNAG00000000789) #31	ENSNNAG00000000776 #32	TFB2M (ENSNNAG00000000762) #33	CNST (ENSNNAG00000000744) #34	SCCPDH (ENSNNAG00000000723) #35	ENSNNAG00000000689	AHCTF1 (ENSNNAG00000000655)	SRD5A2 (ENSNNAG00000000638)	MEMO1 (ENSNNAG00000000623)
Lizard	MODERN SPECIES	899									ENSACAG00000040328	ENSACAG00000005222 #19	ENSACAG00000041458	ENSACAG00000039879 #19	ENSACAG00000006805	AKT3 (ENSACAG00000006720) #21	ENSACAG00000034668	ZBTB18 (ENSACAG00000004296) #22	ENSACAG00000039475	ENSACAG00000043662	ENSACAG00000039315	ADSS2 (ENSACAG00000004299) #25	DESI2 (ENSACAG00000004473) #27	COX20 (ENSACAG00000043840) #28	HNRNPU (ENSACAG00000004511) #29	ENSACAG00000037868 #29	EFCAB2 (ENSACAG00000040747) #30	ENSACAG00000043643	KIF26B (ENSACAG00000011771) #31	ENSACAG00000045590
tuatara	MODERN SPECIES	1838											ENSSPUG00000013417 #19	ENSSPUG00000013423 #19	ENSSPUG00000013431 #19	ENSSPUG00000013443	AKT3 (ENSSPUG00000013463) #21	ZBTB18 (ENSSPUG00000013479) #22
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT01100000263477.B	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766.s #32	ENSGT00940000156766.t #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT01100000263477.B	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766.s #32	ENSGT00940000156766.t #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Aves	ANCESTRAL SPECIES	12	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766.s #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900
Neognathae	ANCESTRAL SPECIES	2	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00960000189749	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00960000189424	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766.s.b.a #32	ENSGT00940000156766.s.b.b #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00960000189749	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00960000189424	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766.s.b.a #32	ENSGT00940000156766.s.b.b #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Anatidae	ANCESTRAL SPECIES	11	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #24	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766.s.b.a #32	ENSGT00940000156766.s.b.b #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT00950000182886.b.a
Pink-footed goose	MODERN SPECIES	53	ENSABRG00000021176	CHRM3 (ENSABRG00000021192)	FMN2 (ENSABRG00000021205)	GREM2 (ENSABRG00000021226) #7	RGS7 (ENSABRG00000021241) #8	PIGM (ENSABRG00000021275)	OPN3 (ENSABRG00000021276) #11	ENSABRG00000021279 #12	EXO1 (ENSABRG00000021292) #14	MAP1LC3C (ENSABRG00000021300) #15	ENSABRG00000021304	PLD5 (ENSABRG00000021308) #18	CEP170 (ENSABRG00000021318) #19	ENSABRG00000021331	AKT3 (ENSABRG00000021338) #21	ZBTB18 (ENSABRG00000021346) #22	ADSS2 (ENSABRG00000021352) #25	DESI2 (ENSABRG00000021358) #27
Duck	MODERN SPECIES	21	RYR2 (ENSAPLG00000011026)	ENSAPLG00000019479	CHRM3 (ENSAPLG00000014510)	FMN2 (ENSAPLG00000014536)	GREM2 (ENSAPLG00000001754) #7	RGS7 (ENSAPLG00000014655) #8	PIGM (ENSAPLG00000028189)	OPN3 (ENSAPLG00000014871) #11	EXO1 (ENSAPLG00000015042) #14	MAP1LC3C (ENSAPLG00000023202) #15	ENSAPLG00000030016	PLD5 (ENSAPLG00000015142) #18	CEP170 (ENSAPLG00000010551) #19	ENSAPLG00000011088	AKT3 (ENSAPLG00000011477) #21	ZBTB18 (ENSAPLG00000002367) #22	ENSAPLG00000011818 #24	ADSS2 (ENSAPLG00000011820) #25	DESI2 (ENSAPLG00000012155) #27	HNRNPU (ENSAPLG00000012268) #29	EFCAB2 (ENSAPLG00000012390) #30	KIF26B (ENSAPLG00000012419) #31	ENSAPLG00000019495	SMYD3 (ENSAPLG00000028273) #32	CNST (ENSAPLG00000014445) #34	SCCPDH (ENSAPLG00000004893) #35	ENSAPLG00000026920	AHCTF1 (ENSAPLG00000005120)	SRD5A2 (ENSAPLG00000025223)	MEMO1 (ENSAPLG00000005693)	SPAST (ENSAPLG00000015351)
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00960000189749	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766.s.b.b #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900	ENSGT00950000182886.b.a	ENSGT00390000006408
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00960000189749	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766.s.b.b #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104.e	ENSGT00390000018900	ENSGT00950000182886.b.a	ENSGT00390000006408
Chicken	MODERN SPECIES	22	FMN2 (ENSGALG00010008880)	GREM2 (ENSGALG00010008824) #7	RGS7 (ENSGALG00010008637) #8	PIGM (ENSGALG00010010361)	OPN3 (ENSGALG00010008451) #11	WDR64 (ENSGALG00010008442) #12	EXO1 (ENSGALG00010008422) #14	MAP1LC3C (ENSGALG00010008400) #15	PLD5 (ENSGALG00010008383) #18	ENSGALG00010008367	ENSGALG00010008364	ENSGALG00010010897 #19	ENSGALG00010008356 #19	ENSGALG00010008348	AKT3 (ENSGALG00010008323) #21	ZBTB18 (ENSGALG00010008312) #22	ADSS2 (ENSGALG00010008285) #25	C1orf101 (ENSGALG00010008263)	DESI2 (ENSGALG00010008257) #27	COX20 (ENSGALG00010008226) #28	HNRNPU (ENSGALG00010008192) #29	EFCAB2 (ENSGALG00010006865) #30	KIF26B (ENSGALG00010006958) #31	SMYD3 (ENSGALG00010006922) #32	TFB2M (ENSGALG00010010346) #33	CNST (ENSGALG00010010338) #34	SCCPDH (ENSGALG00010010197) #35	ENSGALG00010010164	AHCTF1 (ENSGALG00010010125)	SRD5A2 (ENSGALG00010007017)	MEMO1 (ENSGALG00010007365)
Turkey	MODERN SPECIES	11	ENSMGAG00000011391 #35	ENSMGAG00000019870	ENSMGAG00000011401 #34	ENSMGAG00000011408 #33	ENSMGAG00000018106	ENSMGAG00000020397 #32	ENSMGAG00000011410 #32	ENSMGAG00000011412 #31	EFCAB2 (ENSMGAG00000011423) #30	ENSMGAG00000011449 #28	ENSMGAG00000011427 #29	ENSMGAG00000017863 #27	ENSMGAG00000021227 #26	ENSMGAG00000021050 #25	ENSMGAG00000011463 #25	ENSMGAG00000011476 #22	ENSMGAG00000011487	ENSMGAG00000011477 #21	ENSMGAG00000018419	ENSMGAG00000018116 #19	ENSMGAG00000011504 #19	ENSMGAG00000021098	ENSMGAG00000021812 #18	ENSMGAG00000023018 #15	ENSMGAG00000011525 #14	ENSMGAG00000021226 #12	ENSMGAG00000011527 #12	ENSMGAG00000011545 #11	ENSMGAG00000011557 #8	ENSMGAG00000018471	ENSMGAG00000015834 #7
Japanese quail	MODERN SPECIES	21	MTR (ENSCJPG00005016942)	RYR2 (ENSCJPG00005013886)	CHRM3 (ENSCJPG00005013867)	ENSCJPG00005013865	GREM2 (ENSCJPG00005013864) #7	RGS7 (ENSCJPG00005013863) #8	PIGM (ENSCJPG00005013862)	OPN3 (ENSCJPG00005013861) #11	ENSCJPG00005013860 #12	EXO1 (ENSCJPG00005013858) #14	MAP1LC3C (ENSCJPG00005013857) #15	PLD5 (ENSCJPG00005013854) #18	CEP170 (ENSCJPG00005013850) #19	ENSCJPG00005013849	AKT3 (ENSCJPG00005013848) #21	ZBTB18 (ENSCJPG00005013847) #22	ADSS2 (ENSCJPG00005013811) #25	DESI2 (ENSCJPG00005013810) #27	COX20 (ENSCJPG00005013809) #28	HNRNPU (ENSCJPG00005013808) #29	ENSCJPG00005013807	KIF26B (ENSCJPG00005013806) #31	ENSCJPG00005013805 #32	ENSCJPG00005013804 #32	TFB2M (ENSCJPG00005013803) #33	CNST (ENSCJPG00005013802) #34	SCCPDH (ENSCJPG00005013801) #35	ENSCJPG00005013800	AHCTF1 (ENSCJPG00005013799)	SRD5A2 (ENSCJPG00005013798)	MEMO1 (ENSCJPG00005013797)
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00960000189424	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766.s.b.a #32	ENSGT00940000156766.s.b.b #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900	ENSGT00950000182886.b.a
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.j	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766.s.b.a #32	ENSGT00940000156766.s.b.b #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900	ENSGT00950000182886.b.a	ENSGT00390000006408	ENSGT00390000008808
Great tit	MODERN SPECIES	22	QPCT (ENSPMJG00000015109)	SLC30A6 (ENSPMJG00000015108)	ENSPMJG00000015107	SPAST (ENSPMJG00000015106)	DPY30 (ENSPMJG00000015105)	MEMO1 (ENSPMJG00000015104)	SRD5A2 (ENSPMJG00000015102)	ENSPMJG00000015100	AKT3 (ENSPMJG00000015099) #21	ENSPMJG00000015098	CEP170 (ENSPMJG00000015097) #19	PLD5 (ENSPMJG00000015095) #18	RSPH9 (ENSPMJG00000015094)	MRPS18A (ENSPMJG00000015093)	VEGFA (ENSPMJG00000015091)	ZBTB18 (ENSPMJG00000015085) #22	ENSPMJG00000015083	ENSPMJG00000015081	ADSS2 (ENSPMJG00000015080) #25	DESI2 (ENSPMJG00000015079) #27	COX20 (ENSPMJG00000015078) #28	HNRNPU (ENSPMJG00000015077) #29	EFCAB2 (ENSPMJG00000015075) #30	KIF26B (ENSPMJG00000015074) #31	ENSPMJG00000015073 #32	ENSPMJG00000015072 #32	TFB2M (ENSPMJG00000015071) #33	CNST (ENSPMJG00000015070) #34	SCCPDH (ENSPMJG00000015069) #35	MRPL14 (ENSPMJG00000015068)	TMEM63B (ENSPMJG00000014856)
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.j	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766.s.b.a #32	ENSGT00940000156766.s.b.b #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900	ENSGT00950000182886.b.a	ENSGT00390000006408	ENSGT00390000008808
Flycatcher	MODERN SPECIES	21	TMEM151B (ENSFALG00000011278)	NFKBIE (ENSFALG00000011284)	SLC35B2 (ENSFALG00000023207)	HSP90AB1 (ENSFALG00000011300)	SLC29A1 (ENSFALG00000011304)	CAPN11 (ENSFALG00000011310)	TMEM63B (ENSFALG00000011313)	MRPL14 (ENSFALG00000011324)	VEGFA (ENSFALG00000027112)	MRPS18A (ENSFALG00000011356)	RSPH9 (ENSFALG00000025305)	PLD5 (ENSFALG00000011379) #18	CEP170 (ENSFALG00000011398) #19	ENSFALG00000011420	AKT3 (ENSFALG00000011439) #21	ZBTB18 (ENSFALG00000011473) #22	ADSS2 (ENSFALG00000011484) #25	DESI2 (ENSFALG00000011507) #27	HNRNPU (ENSFALG00000011528) #29	EFCAB2 (ENSFALG00000011546) #30	KIF26B (ENSFALG00000011555) #31	ENSFALG00000011563 #32	ENSFALG00000023592 #32	TFB2M (ENSFALG00000011573) #33	CNST (ENSFALG00000011587) #34	SCCPDH (ENSFALG00000023810) #35	ENSFALG00000027448	ENSFALG00000011625	SRD5A2 (ENSFALG00000025876)	MEMO1 (ENSFALG00000011653)	DPY30 (ENSFALG00000023125)
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.j	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766.s.b.a #32	ENSGT00940000156766.s.b.b #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900.j	ENSGT00390000018900.i	ENSGT00950000182886.b.a	ENSGT00390000006408
Passeroidea	ANCESTRAL SPECIES		ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.j	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766.s.b.b #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900.j.a	ENSGT00390000018900.j.b	ENSGT00950000182886.b.a	ENSGT00390000006408	ENSGT00390000008808
Common canary	MODERN SPECIES	1	TMEM151B (ENSSCAG00000013650)	NFKBIE (ENSSCAG00000013648)	SLC35B2 (ENSSCAG00000013646)	HSP90AB1 (ENSSCAG00000013643)	SLC29A1 (ENSSCAG00000013635)	CAPN11 (ENSSCAG00000013612)	TMEM63B (ENSSCAG00000013598)	MRPL14 (ENSSCAG00000013591)	VEGFA (ENSSCAG00000013564)	MRPS18A (ENSSCAG00000013545)	RSPH9 (ENSSCAG00000013509)	PLD5 (ENSSCAG00000013478) #18	CEP170 (ENSSCAG00000013445) #19	ENSSCAG00000013409	AKT3 (ENSSCAG00000013390) #21	ZBTB18 (ENSSCAG00000013375) #22	ADSS2 (ENSSCAG00000013319) #25	DESI2 (ENSSCAG00000013277) #27	COX20 (ENSSCAG00000013270) #28	HNRNPU (ENSSCAG00000012822) #29	EFCAB2 (ENSSCAG00000012708) #30	KIF26B (ENSSCAG00000012689) #31	ENSSCAG00000012675 #32	ENSSCAG00000012669 #32	ENSSCAG00000012664 #33	CNST (ENSSCAG00000012662) #34	SCCPDH (ENSSCAG00000012649) #35	ENSSCAG00000012619	ENSSCAG00000012351	SRD5A2 (ENSSCAG00000012273)	MEMO1 (ENSSCAG00000012271)
Zebra finch	MODERN SPECIES	23	TMEM151B (ENSTGUG00000007960)	SLC35B2 (ENSTGUG00000007969)	ENSTGUG00000026910	ENSTGUG00000026786	SLC29A1 (ENSTGUG00000007972)	CAPN11 (ENSTGUG00000008009)	TMEM63B (ENSTGUG00000008105)	MRPL14 (ENSTGUG00000008134)	VEGFA (ENSTGUG00000008137)	MRPS18A (ENSTGUG00000021976)	RSPH9 (ENSTGUG00000008150)	PLD5 (ENSTGUG00000008155) #18	CEP170 (ENSTGUG00000008164) #19	ENSTGUG00000008192	AKT3 (ENSTGUG00000008212) #21	ZBTB18 (ENSTGUG00000008247) #22	ADSS2 (ENSTGUG00000008252) #25	DESI2 (ENSTGUG00000024880) #27	HNRNPU (ENSTGUG00000008309) #29	EFCAB2 (ENSTGUG00000019448) #30	KIF26B (ENSTGUG00000008377) #31	ENSTGUG00000029207 #32	ENSTGUG00000021382 #32	TFB2M (ENSTGUG00000008396) #33	CNST (ENSTGUG00000008403) #34	ENSTGUG00000009271	ENSTGUG00000009240	ENSTGUG00000009224	MAD2L1BP (ENSTGUG00000025478)	GTPBP2 (ENSTGUG00000009198)	POLH (ENSTGUG00000009195)
Medium ground finch	MODERN SPECIES	2	TMEM151B (ENSGFOG00000008584)	NFKBIE (ENSGFOG00000008595)	SLC35B2 (ENSGFOG00000008713)	HSP90AB1 (ENSGFOG00000008726)	SLC29A1 (ENSGFOG00000008809)	CAPN11 (ENSGFOG00000008822)	TMEM63B (ENSGFOG00000008835)	MRPL14 (ENSGFOG00000008855)	VEGFA (ENSGFOG00000008871)	RSPH9 (ENSGFOG00000009102)	MRPS18A (ENSGFOG00000009108)	PLD5 (ENSGFOG00000009114) #18	CEP170 (ENSGFOG00000009123) #19	ENSGFOG00000009156	AKT3 (ENSGFOG00000009182) #21	ZBTB18 (ENSGFOG00000009192) #22	ADSS2 (ENSGFOG00000009201) #25	DESI2 (ENSGFOG00000009482) #27	COX20 (ENSGFOG00000009494) #28	HNRNPU (ENSGFOG00000009639) #29	EFCAB2 (ENSGFOG00000000037) #30	KIF26B (ENSGFOG00000000039) #31	ENSGFOG00000000043 #32	ENSGFOG00000000048 #32	ENSGFOG00000000051 #33	CNST (ENSGFOG00000000055) #34	SCCPDH (ENSGFOG00000000059) #35	AHCTF1 (ENSGFOG00000000080)	SRD5A2 (ENSGFOG00000000139)	MEMO1 (ENSGFOG00000000144)	DPY30 (ENSGFOG00000000149)
Neognathae_c	ANCESTRAL SPECIES	5	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000170414	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00960000189424	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766.s.b.a #32	ENSGT00940000156766.s.b.b #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900	ENSGT00950000182886.b.a
Golden eagle	MODERN SPECIES	4	RYR2 (ENSACCG00020010478)	CHRM3 (ENSACCG00020009211)	ENSACCG00020009194	GREM2 (ENSACCG00020009170) #7	RGS7 (ENSACCG00020009103) #8	PIGM (ENSACCG00020009063)	OPN3 (ENSACCG00020009054) #11	WDR64 (ENSACCG00020009035) #12	EXO1 (ENSACCG00020008994) #14	MAP1LC3C (ENSACCG00020008971) #15	ENSACCG00020008958	PLD5 (ENSACCG00020008933) #18	CEP170 (ENSACCG00020008889) #19	ENSACCG00020008818	AKT3 (ENSACCG00020008750) #21	ZBTB18 (ENSACCG00020008740) #22	ENSACCG00020008728	ADSS2 (ENSACCG00020008703) #25	DESI2 (ENSACCG00020008693) #27	COX20 (ENSACCG00020008679) #28	ENSACCG00020008665	HNRNPU (ENSACCG00020008633) #29	EFCAB2 (ENSACCG00020008604) #30	KIF26B (ENSACCG00020008572) #31	ENSACCG00020008547 #32	ENSACCG00020008515 #32	TFB2M (ENSACCG00020008479) #33	CNST (ENSACCG00020008462) #34	SCCPDH (ENSACCG00020008443) #35	AHCTF1 (ENSACCG00020008399)	SRD5A2 (ENSACCG00020008376)
Kakapo	MODERN SPECIES	2	ACTN2 (ENSSHBG00005010917)	MTR (ENSSHBG00005011060)	RYR2 (ENSSHBG00005014250)	FMN2 (ENSSHBG00005021049)	GREM2 (ENSSHBG00005021059) #7	RGS7 (ENSSHBG00005021061) #8	PIGM (ENSSHBG00005021062)	OPN3 (ENSSHBG00005021063) #11	ENSSHBG00005021065 #12	EXO1 (ENSSHBG00005021067) #14	MAP1LC3C (ENSSHBG00005021069) #15	PLD5 (ENSSHBG00005021070) #18	CEP170 (ENSSHBG00005021076) #19	ENSSHBG00005021079	AKT3 (ENSSHBG00005021092) #21	ZBTB18 (ENSSHBG00005021093) #22	ADSS2 (ENSSHBG00005021096) #25	DESI2 (ENSSHBG00005021098) #27	COX20 (ENSSHBG00005021099) #28	HNRNPU (ENSSHBG00005021100) #29	EFCAB2 (ENSSHBG00005021101) #30	KIF26B (ENSSHBG00005021103) #31	ENSSHBG00005021106 #32	ENSSHBG00005021108 #32	TFB2M (ENSSHBG00005021109) #33	ENSSHBG00005021110	CNST (ENSSHBG00005021111) #34	SCCPDH (ENSSHBG00005021115) #35	AHCTF1 (ENSSHBG00005021118)	SRD5A2 (ENSSHBG00005021120)	MEMO1 (ENSSHBG00005021122)
African ostrich	MODERN SPECIES	935												CEP170 (ENSSCUG00000017975) #19	ENSSCUG00000017982	AKT3 (ENSSCUG00000017989) #21	ENSSCUG00000017991	ZBTB18 (ENSSCUG00000017992) #22
Australian saltwater crocodile	MODERN SPECIES	60	CHRM3 (ENSCPRG00005014581)	ENSCPRG00005014577	ENSCPRG00005014566	GREM2 (ENSCPRG00005014565) #7	RGS7 (ENSCPRG00005014452) #8	PIGM (ENSCPRG00005014387)	OPN3 (ENSCPRG00005014373) #11	WDR64 (ENSCPRG00005014354) #12	EXO1 (ENSCPRG00005014340) #14	MAP1LC3C (ENSCPRG00005014326) #15	PLD5 (ENSCPRG00005014316) #18	ENSCPRG00005014303	CEP170 (ENSCPRG00005014277) #19	ENSCPRG00005014262	AKT3 (ENSCPRG00005014254) #21	ZBTB18 (ENSCPRG00005014249) #22	C1orf100 (ENSCPRG00005014243) #24	ADSS2 (ENSCPRG00005014241) #25	DESI2 (ENSCPRG00005014238) #27	ENSCPRG00005014235	COX20 (ENSCPRG00005014229) #28	HNRNPU (ENSCPRG00005013940) #29	EFCAB2 (ENSCPRG00005013903) #30	KIF26B (ENSCPRG00005013894) #31	ENSCPRG00005013850 #32	ENSCPRG00005013821 #32	TFB2M (ENSCPRG00005013817) #33	CNST (ENSCPRG00005013810) #34	SCCPDH (ENSCPRG00005013798) #35	ENSCPRG00005013782	AHCTF1 (ENSCPRG00005013777)
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00940000154289.B	ENSGT01030000235112	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT00950000183059.b.a.b #18	ENSGT01100000263477.B	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT01000000216868	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766.s #32	ENSGT00940000156766.t #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Testudinoidea	ANCESTRAL SPECIES		ENSGT01030000235112	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT01100000263477.B.a.b.a.b	ENSGT00950000183059.b.a.b #18	ENSGT01100000263477.B.a.a	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT01000000216868	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766.s #32	ENSGT00940000156766.t #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Emydidae	ANCESTRAL SPECIES		ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037.g #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT01100000263477.B.a.b.b	ENSGT01100000263477.B.a.b.a.a	ENSGT01100000263477.B.a.b.a.b	ENSGT00950000183059.b.a.b #18	ENSGT01100000263477.B.a.a	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT01000000216868	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766.s #32	ENSGT00940000156766.t #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Three-toed box turtle	MODERN SPECIES	31	OPN3 (ENSTMTG00000009640) #11	ENSTMTG00000009618 #12	ENSTMTG00000009584 #12	EXO1 (ENSTMTG00000009610) #14	MAP1LC3C (ENSTMTG00000009592) #15	ENSTMTG00000009581	ENSTMTG00000009558	ENSTMTG00000009546	PLD5 (ENSTMTG00000009450) #18	ENSTMTG00000009425	ENSTMTG00000009398 #19	ENSTMTG00000009377 #19	ENSTMTG00000009362 #19	ENSTMTG00000008872	AKT3 (ENSTMTG00000008734) #21	ZBTB18 (ENSTMTG00000008708) #22	ADSS2 (ENSTMTG00000008677) #25	ENSTMTG00000008625	DESI2 (ENSTMTG00000008608) #27	COX20 (ENSTMTG00000008601) #28	HNRNPU (ENSTMTG00000008554) #29	EFCAB2 (ENSTMTG00000008442) #30	ENSTMTG00000008415	ENSTMTG00000008402	KIF26B (ENSTMTG00000008353) #31	ENSTMTG00000008337 #32	ENSTMTG00000008323 #32	TFB2M (ENSTMTG00000008308) #33	CNST (ENSTMTG00000008293) #34	SCCPDH (ENSTMTG00000008269) #35	ENSTMTG00000008213
painted turtle	MODERN SPECIES	740	FMN2 (ENSCPBG00000008555)	RGS7 (ENSCPBG00000008651) #8	PIGM (ENSCPBG00000008700)	ENSCPBG00000008703 #11	ENSCPBG00000008720 #12	EXO1 (ENSCPBG00000008725) #14	MAP1LC3C (ENSCPBG00000008734) #15	ENSCPBG00000008739	ENSCPBG00000008747	ENSCPBG00000008755	PLD5 (ENSCPBG00000008770) #18	ENSCPBG00000008793	CEP170 (ENSCPBG00000008802) #19	ENSCPBG00000008841	AKT3 (ENSCPBG00000008877) #21	ZBTB18 (ENSCPBG00000008891) #22	ENSCPBG00000008896	ADSS2 (ENSCPBG00000008911) #25	CATSPERE (ENSCPBG00000009395) #26	DESI2 (ENSCPBG00000009405) #27	COX20 (ENSCPBG00000009409) #28	HNRNPU (ENSCPBG00000009415) #29	EFCAB2 (ENSCPBG00000009428) #30	KIF26B (ENSCPBG00000009439) #31	ENSCPBG00000009453 #32
Testudinidae	ANCESTRAL SPECIES	6	ENSGT00940000161899	ENSGT00940000154209.a.b #7	ENSGT00940000156661 #8	ENSGT00390000017728	ENSGT01100000263502.A.a.b #11	ENSGT00940000160037 #12	ENSGT00510000047676 #14	ENSGT00940000161852.y.a #15	ENSGT01100000263477.B.a.b.a.b	ENSGT00950000183059.b.a.b.j #18	ENSGT00950000183059.b.a.b.i #18	ENSGT01100000263477.B.a.a	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT01000000216868	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992 #31	ENSGT00940000156766.s #32	ENSGT00940000156766.t #32	ENSGT00950000183142.a.b.a.b #33	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Abingdon island giant tortoise	MODERN SPECIES	2165										ENSCABG00000019244	ENSCABG00000019243 #19	ENSCABG00000019241 #19	ENSCABG00000019240 #19	ENSCABG00000019231	AKT3 (ENSCABG00000019225) #21	ZBTB18 (ENSCABG00000019220) #22	ADSS2 (ENSCABG00000019217) #25	ENSCABG00000019211	DESI2 (ENSCABG00000019209) #27	COX20 (ENSCABG00000019207) #28	HNRNPU (ENSCABG00000019135) #29	EFCAB2 (ENSCABG00000019130) #30	ENSCABG00000019128	KIF26B (ENSCABG00000019123) #31	ENSCABG00000019116 #32	ENSCABG00000019112 #32	TFB2M (ENSCABG00000019111) #33	ENSCABG00000019110	CNST (ENSCABG00000019108) #34	SCCPDH (ENSCABG00000019105) #35	ENSCABG00000019102
Goode s thornscrub tortoise	MODERN SPECIES	17	ENSGEVG00005006835	GREM2 (ENSGEVG00005006866) #7	RGS7 (ENSGEVG00005006882) #8	PIGM (ENSGEVG00005006959)	OPN3 (ENSGEVG00005006979) #11	WDR64 (ENSGEVG00005007015) #12	EXO1 (ENSGEVG00005007131) #14	MAP1LC3C (ENSGEVG00005007218) #15	ENSGEVG00005007255	ENSGEVG00005007282 #18	ENSGEVG00005007295 #18	ENSGEVG00005007329	CEP170 (ENSGEVG00005007486) #19	ENSGEVG00005008314	AKT3 (ENSGEVG00005008378) #21	ZBTB18 (ENSGEVG00005008483) #22	ENSGEVG00005008494	ADSS2 (ENSGEVG00005008513) #25	ENSGEVG00005008540 #26	DESI2 (ENSGEVG00005008575) #27	COX20 (ENSGEVG00005008584) #28	HNRNPU (ENSGEVG00005008607) #29	EFCAB2 (ENSGEVG00005008659) #30	ENSGEVG00005008713	KIF26B (ENSGEVG00005008743) #31	ENSGEVG00005008863 #32	ENSGEVG00005008911 #32	TFB2M (ENSGEVG00005008934) #33	CNST (ENSGEVG00005009018) #34	SCCPDH (ENSGEVG00005009063) #35	ENSGEVG00005009122
Anura	ANCESTRAL SPECIES	385														ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25
Frog	MODERN SPECIES	5	tsnax (ENSXETG00000026152)	egln1 (ENSXETG00000021414)	sprtn (ENSXETG00000021416)	acta1 (ENSXETG00000021417)	ENSXETG00000047644	ENSXETG00000044488	sipa1l2 (ENSXETG00000033496)	ENSXETG00000043235	ENSXETG00000045588	ntpcr (ENSXETG00000014584)	pcnx2 (ENSXETG00000014571)	slc35f3 (ENSXETG00000039979)	map1lc3c (ENSXETG00000032112) #9	cep170 (ENSXETG00000014548) #19	sdccag8 (ENSXETG00000014544)	zbtb18 (ENSXETG00000014541) #22	adss2 (ENSXETG00000014538) #25	cep43 (ENSXETG00000014534)	ccr6 (ENSXETG00000036513)	ENSXETG00000042751	rnaset2 (ENSXETG00000048600)	ENSXETG00000043277	nid1 (ENSXETG00000016220)	gpr137b (ENSXETG00000016222)	ero1b (ENSXETG00000016223)	ENSXETG00000044188	tarbp1 (ENSXETG00000016224)	ENSXETG00000044965	coa6 (ENSXETG00000016226)	kmo (ENSXETG00000016227) #10	fmn2 (ENSXETG00000016228)
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000011611	TARBP1 (ENSLLEG00000010025)	ENSLLEG00000009477	ENSLLEG00000009319	MPC1 (ENSLLEG00000009223)	ENSLLEG00000009208	ENSLLEG00000009188	ENSLLEG00000009149	ENSLLEG00000009099	ENSLLEG00000009016	ENSLLEG00000008802	ENSLLEG00000008766	FH (ENSLLEG00000007980) #9	ENSLLEG00000007925	ENSLLEG00000007856	ZBTB18 (ENSLLEG00000007836) #22	ENSLLEG00000007819	ENSLLEG00000007504 #25	ENSLLEG00000007458	ENSLLEG00000007445	TBP (ENSLLEG00000007226)	ENSLLEG00000007171	ENSLLEG00000007155	PSMB1 (ENSLLEG00000006976)	ENSLLEG00000006938	ENSLLEG00000006928	FAM120B (ENSLLEG00000006784)	DLL1 (ENSLLEG00000006710)	ENSLLEG00000006689	ENSLLEG00000006662	ENSLLEG00000006653
Coelacanth	MODERN SPECIES	397																ZBTB18 (ENSLACG00000009889) #22	ADSS2 (ENSLACG00000010671) #25	ENSLACG00000012326	DESI2 (ENSLACG00000022252) #27	COX20 (ENSLACG00000014289) #28	HEATR5B (ENSLACG00000014437)	STRN (ENSLACG00000015115)	VIT (ENSLACG00000015656)	opn6a (ENSLACG00000016213)	SPAST (ENSLACG00000016737)	DPY30 (ENSLACG00000016865)	ENSLACG00000016894	MEMO1 (ENSLACG00000016959)	PSEN2 (ENSLACG00000016973)
Actinopterygii	ANCESTRAL SPECIES	19											ENSGT00940000179440	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00960000189749	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00530000064150	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000160850	ENSGT00990000204028	ENSGT00940000161124	ENSGT00940000159629	ENSGT00940000157374	ENSGT00390000018683	ENSGT00390000008459
Reedfish	MODERN SPECIES	6	TXLNB (ENSECRG00000013025)	cited2 (ENSECRG00000013047)	NMBR (ENSECRG00000013065)	gje1a (ENSECRG00000013078)	vta1 (ENSECRG00000013100)	AIG1 (ENSECRG00000013127)	adat2 (ENSECRG00000013137)	pex3 (ENSECRG00000013171)	fuca2 (ENSECRG00000013202)	ENSECRG00000013224	igf2r (ENSECRG00000013268)	slc22a2 (ENSECRG00000013338)	CEP170 (ENSECRG00000013387) #19	sdccag8 (ENSECRG00000013469)	akt3a (ENSECRG00000013522) #21	zbtb18 (ENSECRG00000013548) #22	adss2 (ENSECRG00000013580) #25	TTBK1 (ENSECRG00000013628)	tpcn3 (ENSECRG00000013647)	MTLN (ENSECRG00000013669)	NPHP1 (ENSECRG00000013685)	haao (ENSECRG00000013705)	ENSECRG00000013720	ENSECRG00000013735	mta3 (ENSECRG00000013757)	KCNG3 (ENSECRG00000013787)	cox7a2l (ENSECRG00000013799)	EML4 (ENSECRG00000013922)	pkdcca (ENSECRG00000014247)	BICRAL (ENSECRG00000014286)	tbcc (ENSECRG00000014362)
Neopterygii	ANCESTRAL SPECIES	92											ENSGT00940000179440	ENSGT00950000183059.b.a.b #18	ENSGT00940000155103.a.b #19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00740000116878	ENSGT00530000064150	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000160850	ENSGT01030000235197	ENSGT00990000204028	ENSGT00940000161124	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236
Spotted gar	MODERN SPECIES	654								EFEMP1 (ENSLOCG00000015373)	PNPT1 (ENSLOCG00000015375)	ppp4r3b (ENSLOCG00000015378)	cfap36 (ENSLOCG00000015379)	PLD5 (ENSLOCG00000015383) #18	CEP170 (ENSLOCG00000015386) #19	sdccag8 (ENSLOCG00000015392)	akt3a (ENSLOCG00000015396) #21	zbtb18 (ENSLOCG00000017349) #22	adss2 (ENSLOCG00000015399) #25	CATSPERE (ENSLOCG00000015402) #26	desi2 (ENSLOCG00000015410) #27	ENSLOCG00000015411	lhb (ENSLOCG00000015412)	COX20 (ENSLOCG00000015413) #28	ENSLOCG00000015417	ARFGEF3 (ENSLOCG00000015418)	perp (ENSLOCG00000015423)	TNFAIP3 (ENSLOCG00000015425)	olig3 (ENSLOCG00000017350)	si:ch73-52p7.1 (ENSLOCG00000017351)	ENSLOCG00000015428	IL22RA2 (ENSLOCG00000015429)	MAP3K21 (ENSLOCG00000015431)
Osteoglossocephalai	ANCESTRAL SPECIES	104													ENSGT00940000155103.a.a ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00740000116878	ENSGT00530000064150	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000160850	ENSGT01030000235197	ENSGT00990000204028	ENSGT00940000161124	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00940000155092.b.g #22
P. kingsleyae	MODERN SPECIES	21	ENSPKIG00000009596	ENSPKIG00000009585	ENSPKIG00000009554	ENSPKIG00000009503	myom2a (ENSPKIG00000009341)	DLL1 (ENSPKIG00000009254)	ENSPKIG00000009230	taf5l (ENSPKIG00000009210)	nup133 (ENSPKIG00000009104)	ENSPKIG00000009040	ENSPKIG00000009022	capn9 (ENSPKIG00000008922)	ENSPKIG00000008841	ENSPKIG00000008825	ENSPKIG00000008801	ENSPKIG00000008787 #22	EML6 (ENSPKIG00000008716)	SPTBN1 (ENSPKIG00000008490)	ENSPKIG00000008430	ACYP2 (ENSPKIG00000008416)	ppp1r12c (ENSPKIG00000008387)	ENSPKIG00000008308	ENSPKIG00000008249	ENSPKIG00000008202	chmp2a (ENSPKIG00000008158)	ENSPKIG00000008132	ENSPKIG00000008104	mrpl4 (ENSPKIG00000008086)	RNF40 (ENSPKIG00000007994)	ENSPKIG00000007944	ENSPKIG00000007889
Osteoglossiformes	ANCESTRAL SPECIES	3	ENSGT00390000005045	ENSGT00940000154864.b	ENSGT00940000155564.m	ENSGT00940000156568	ENSGT00940000157820.a.b	ENSGT00900000141103	ENSGT00440000033965	ENSGT00940000155559.a.a	ENSGT00390000014001	ENSGT00390000018199.b	ENSGT00390000012785	ENSGT00950000183059.b.a.b.q #18	ENSGT00940000155103.a.a ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b.h #22	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00940000164014.a.a	ENSGT00940000161285.a	ENSGT00390000016158 #28	ENSGT00530000064150	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000160850	ENSGT01030000235197	ENSGT00990000204028	ENSGT00940000161124	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d
P. kingsleyae	MODERN SPECIES	239	EML6 (ENSPKIG00000021373)	rtn4a (ENSPKIG00000021443)	ENSPKIG00000021466	ENSPKIG00000021479	rps27a (ENSPKIG00000021492)	mtif2 (ENSPKIG00000021512)	prorsd1 (ENSPKIG00000021531)	CCDC88A (ENSPKIG00000021545)	PNPT1 (ENSPKIG00000021612)	ppp4r3b (ENSPKIG00000021695)	CFAP36 (ENSPKIG00000021747)	PLD5 (ENSPKIG00000021787) #18	ENSPKIG00000021828 ##19	sdccag8 (ENSPKIG00000021888)	akt3a (ENSPKIG00000021930) #21	zbtb18 (ENSPKIG00000021964) #22	adss2 (ENSPKIG00000021986) #25	desi2 (ENSPKIG00000022033) #27	ENSPKIG00000022070	ENSPKIG00000022086	TMEM63B (ENSPKIG00000022152)	ENSPKIG00000022250	ENSPKIG00000022259	ENSPKIG00000022275	mrpl14 (ENSPKIG00000022296)	mrps28 (ENSPKIG00000022304)	capn1a (ENSPKIG00000022346)	capn2a (ENSPKIG00000022419)	ENSPKIG00000022471	ENSPKIG00000022491
Asian bonytongue	MODERN SPECIES	19	SPTBN1 (ENSSFOG00015018087)	EML6 (ENSSFOG00015017819)	RTN4 (ENSSFOG00015027956)	ENSSFOG00015017748	rps27a (ENSSFOG00015017733)	mtif2 (ENSSFOG00015017713)	prorsd1 (ENSSFOG00015017697)	CCDC88A (ENSSFOG00015017646)	PNPT1 (ENSSFOG00015017596)	ppp4r3b (ENSSFOG00015017533)	CFAP36 (ENSSFOG00015017484)	PLD5 (ENSSFOG00015017430) #18	ENSSFOG00015029992 ##19	sdccag8 (ENSSFOG00015017282)	akt3a (ENSSFOG00015017191) #21	zbtb18 (ENSSFOG00015029018) #22	adss2 (ENSSFOG00015016501) #25	desi2 (ENSSFOG00015032938) #27	ENSSFOG00015016389	ENSSFOG00015031048	ENSSFOG00015016362	lhb (ENSSFOG00015016353)	COX20 (ENSSFOG00015032444) #28	ARFGEF3 (ENSSFOG00015016271)	perp (ENSSFOG00015026614)	TNFAIP3 (ENSSFOG00015028670)	olig3 (ENSSFOG00015031704)	si:ch73-52p7.1 (ENSSFOG00015016232)	ifngr1 (ENSSFOG00015016173)	IL22RA2 (ENSSFOG00015016161)	MAP3K21 (ENSSFOG00015016017)
Clupeocephala	ANCESTRAL SPECIES	88	ENSGT00510000047850	ENSGT00940000158292.a	ENSGT00940000160346.B	ENSGT00390000002168	ENSGT00940000178768	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00940000155103.a.a ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00940000164014.a.a	ENSGT00940000164014.a.b	ENSGT00940000161285.a	ENSGT00390000016158 #28	ENSGT00530000064150	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000160850	ENSGT00990000204028	ENSGT00940000161124	ENSGT01030000235197	ENSGT00940000165457.a.a
Euteleosteomorpha	ANCESTRAL SPECIES	118	ENSGT00510000047850	ENSGT00940000158292.a	ENSGT00940000160346.B	ENSGT00390000002168	ENSGT00940000178768	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00940000155103.a.a ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00940000164014.a.a	ENSGT00940000164014.a.b	ENSGT00940000161285.a	ENSGT00390000016158 #28	ENSGT00530000064150	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000160850	ENSGT00990000204028	ENSGT00940000161124	ENSGT01030000235197	ENSGT00940000165457.a.a
Protacanthopterygii	ANCESTRAL SPECIES	4	ENSGT00940000154711.a.a	ENSGT00510000047850	ENSGT00940000158292.a	ENSGT00940000160346.B	ENSGT00390000002168	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00940000155103.a.a ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00940000164014.a.a	ENSGT00940000164014.a.b	ENSGT00940000161285.a	ENSGT00390000016158 #28	ENSGT00530000064150	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000160850	ENSGT00990000204028	ENSGT00940000161124	ENSGT00940000159629	ENSGT00940000157374
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	19	ENSGT00940000154711.a.a.f.b.a	ENSGT00940000154711.a.a.f.b.b.a.a	ENSGT00510000047850	ENSGT00940000158292.a.c	ENSGT00940000160346.B.g	ENSGT00390000002168	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a.f	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00940000155103.a.a.e ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b.i #22	ENSGT00390000015553.a.a.b.c #25	ENSGT00730000111005 #27	ENSGT00940000164014.a.a	ENSGT00940000164014.a.b	ENSGT00940000161285.a	ENSGT00390000016158 #28	ENSGT00530000064150.a	ENSGT00530000063484.a.r	ENSGT00940000158448.k	ENSGT00940000160850.f	ENSGT00990000204028	ENSGT00940000161124	ENSGT00940000159629.e	ENSGT00940000157374.m	ENSGT00940000155393.d.sb.b.b
Salmoninae_a	ANCESTRAL SPECIES	38	ENSGT00940000154711.a.a.f.b.a	ENSGT00940000154711.a.a.f.b.b.a.a	ENSGT00510000047850	ENSGT00940000158292.a.c	ENSGT00940000160346.B.g	ENSGT00390000002168	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a.f	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00940000155103.a.a.e ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b.i #22	ENSGT00390000015553.a.a.b.c #25	ENSGT00730000111005 #27	ENSGT00940000164014.a.a	ENSGT00940000164014.a.b	ENSGT00940000161285.a	ENSGT00390000016158 #28	ENSGT00530000064150.a	ENSGT00530000063484.a.r	ENSGT00940000158448.k	ENSGT00940000160850.f	ENSGT00990000204028.a	ENSGT00990000204028.b	ENSGT00940000161124	ENSGT00940000159629.e	ENSGT00940000157374.m
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT00940000155930.i.a	ENSGT00940000154711.a.a.f.b.b.a.a	ENSGT00510000047850.p	ENSGT00940000158292.a.c	ENSGT00940000160346.B.g	ENSGT00390000002168	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a.f	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00940000155103.a.a.e ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b.i #22	ENSGT00390000015553.a.a.b.c #25	ENSGT00730000111005 #27	ENSGT00940000164014.a.a	ENSGT00940000164014.a.b.i	ENSGT00940000161285.a	ENSGT00390000016158 #28	ENSGT00530000064150.a	ENSGT00530000063484.a.r	ENSGT00940000158448.k	ENSGT00940000160850.f	ENSGT00990000204028.a	ENSGT00990000204028.b	ENSGT00940000161124	ENSGT00940000159629.e	ENSGT00940000157374.m
Rainbow trout	MODERN SPECIES	12	PRKCE (ENSOMYG00000027840)	SRBD1 (ENSOMYG00000027639)	six2a (ENSOMYG00000027552)	six3a (ENSOMYG00000027541)	CAMKMT (ENSOMYG00000027517)	prepl (ENSOMYG00000027465)	SLC3A1 (ENSOMYG00000027409)	ppm1ba (ENSOMYG00000027363)	ENSOMYG00000064819	LRPPRC (ENSOMYG00000023917)	abcg8 (ENSOMYG00000022993)	abcg5 (ENSOMYG00000022760)	ENSOMYG00000045027 ##19	sdccag8 (ENSOMYG00000045003)	akt3a (ENSOMYG00000044608) #21	zbtb18 (ENSOMYG00000044574) #22	adss2 (ENSOMYG00000044520) #25	desi2 (ENSOMYG00000044491) #27	ENSOMYG00000044485	ENSOMYG00000044483	lhb (ENSOMYG00000044479)	fa36a (ENSOMYG00000044472) #28	ARFGEF3 (ENSOMYG00000042241)	PERP (ENSOMYG00000041975)	TNFAIP3 (ENSOMYG00000041967)	OLIG3 (ENSOMYG00000041966)	ENSOMYG00000041963	ifngr1l (ENSOMYG00000041960)	il22ra2 (ENSOMYG00000041953)	ENSOMYG00000041937	ENSOMYG00000041919
Oncorhynchus_a	ANCESTRAL SPECIES	18	ENSGT00940000155930.i.a	ENSGT00940000154711.a.a.f.b.b.a.a	ENSGT00510000047850.p	ENSGT00940000158292.a.c	ENSGT00940000160346.B.g	ENSGT00390000002168	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a.f	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00940000155103.a.a.e ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b.i #22	ENSGT00390000015553.a.a.b.c #25	ENSGT00730000111005 #27	ENSGT00940000164014.a.a	ENSGT00940000164014.a.b.i	ENSGT00940000161285.a	ENSGT00390000016158 #28	ENSGT00530000064150.a	ENSGT00530000063484.a.r	ENSGT00940000158448.k	ENSGT00940000160850.f	ENSGT00990000204028.a	ENSGT00990000204028.b	ENSGT00940000161124	ENSGT00940000159629.e	ENSGT00940000157374.m
Coho salmon	MODERN SPECIES	17	SRBD1 (ENSOKIG00005017709)	six2a (ENSOKIG00005017646)	six3a (ENSOKIG00005017636)	CAMKMT (ENSOKIG00005017625)	prepl (ENSOKIG00005017614)	ENSOKIG00005017603	SLC3A1 (ENSOKIG00005017562)	ppm1ba (ENSOKIG00005017533)	LRPPRC (ENSOKIG00005013350)	ENSOKIG00005013159	abcg8 (ENSOKIG00005013031)	abcg5 (ENSOKIG00005012860)	ENSOKIG00005012800 ##19	sdccag8 (ENSOKIG00005012733)	akt3a (ENSOKIG00005011894) #21	zbtb18 (ENSOKIG00005011764) #22	adss2 (ENSOKIG00005011490) #25	desi2 (ENSOKIG00005011423) #27	ENSOKIG00005011414	ENSOKIG00005011409	lhb (ENSOKIG00005011400)	COX20 (ENSOKIG00005011375) #28	ARFGEF3 (ENSOKIG00005010077)	perp (ENSOKIG00005009933)	TNFAIP3 (ENSOKIG00005009900)	olig3 (ENSOKIG00005009894)	ifngr1l2 (ENSOKIG00005009873)	ENSOKIG00005009842	IL22RA2 (ENSOKIG00005009816)	MAP3K21 (ENSOKIG00005009748)	ENSOKIG00005009695
Chinook salmon	MODERN SPECIES	17	PRKCE (ENSOTSG00005016642)	SRBD1 (ENSOTSG00005012420)	six2a (ENSOTSG00005012400)	six3a (ENSOTSG00005012398)	CAMKMT (ENSOTSG00005012397)	ENSOTSG00005012396	prepl (ENSOTSG00005012394)	SLC3A1 (ENSOTSG00005012390)	ppm1ba (ENSOTSG00005012387)	LRPPRC (ENSOTSG00005007225)	abcg8 (ENSOTSG00005007196)	abcg5 (ENSOTSG00005006879)	ENSOTSG00005006876 ##19	sdccag8 (ENSOTSG00005006875)	akt3a (ENSOTSG00005006746) #21	zbtb18 (ENSOTSG00005006741) #22	adss2 (ENSOTSG00005004849) #25	desi2 (ENSOTSG00005004836) #27	ENSOTSG00005004835	ENSOTSG00005004833	lhb (ENSOTSG00005004832)	COX20 (ENSOTSG00005004831) #28	ARFGEF3 (ENSOTSG00005004821)	perp (ENSOTSG00005004818)	TNFAIP3 (ENSOTSG00005004795)	olig3 (ENSOTSG00005004793)	ENSOTSG00005004792	ENSOTSG00005004790	IL22RA2 (ENSOTSG00005004785)	MAP3K21 (ENSOTSG00005004736)	ENSOTSG00005004727
Salmo	ANCESTRAL SPECIES	38	ENSGT00940000155930.i.a	ENSGT00940000154711.a.a.f.b.a	ENSGT00510000047850	ENSGT00940000158292.a.c	ENSGT00940000160346.B.g	ENSGT00390000002168	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a.f	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00940000155103.a.a.e ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b.i #22	ENSGT00390000015553.a.a.b.c #25	ENSGT00980000201617.F.c.a	ENSGT00730000111005 #27	ENSGT00940000164014.a.a	ENSGT00940000164014.a.b	ENSGT00940000161285.a	ENSGT00940000168267	ENSGT00530000064150.a	ENSGT00530000063484.a.r	ENSGT00940000158448.k	ENSGT00940000160850.f	ENSGT00990000204028.a	ENSGT00990000204028.b	ENSGT00940000161124	ENSGT00940000159629.e
Atlantic salmon	MODERN SPECIES	20	PRKCE (ENSSSAG00000015628)	SRBD1 (ENSSSAG00000009214)	six2a (ENSSSAG00000115557)	six3 (ENSSSAG00000009058)	CAMKMT (ENSSSAG00000088784)	prepl (ENSSSAG00000008896)	slc3a1 (ENSSSAG00000008865)	ppm1ba (ENSSSAG00000075822)	lrpprc (ENSSSAG00000074489)	abcg8 (ENSSSAG00000074412)	abcg5 (ENSSSAG00000074366)	cep170 (ENSSSAG00000074354) ##19	sdccag8 (ENSSSAG00000074340)	akt3a (ENSSSAG00000073814) #21	ENSSSAG00000099173	zbtb18 (ENSSSAG00000073767) #22	adss2 (ENSSSAG00000001368) #25	ENSSSAG00000118730	desi2 (ENSSSAG00000098449) #27	ENSSSAG00000073662	ENSSSAG00000083826	lhb (ENSSSAG00000073659)	fa36a (ENSSSAG00000073653)	ENSSSAG00000073661	lhb (ENSSSAG00000120804)	ENSSSAG00000109116	ARFGEF3 (ENSSSAG00000072833)	perp (ENSSSAG00000072791)	tnfaip3 (ENSSSAG00000072775)	OLIG3 (ENSSSAG00000117903)	ENSSSAG00000116536
River trout	MODERN SPECIES	1	ENSSTUG00000008688	SRBD1 (ENSSTUG00000008027)	six2a (ENSSTUG00000008001)	six3a (ENSSTUG00000007991)	CAMKMT (ENSSTUG00000007977)	prepl (ENSSTUG00000007937)	SLC3A1 (ENSSTUG00000007889)	ppm1ba (ENSSTUG00000007870)	LRPPRC (ENSSTUG00000005304)	abcg8 (ENSSTUG00000005139)	abcg5 (ENSSTUG00000004866)	ENSSTUG00000004798 ##19	sdccag8 (ENSSTUG00000004741)	ENSSTUG00000004728	akt3a (ENSSTUG00000004044) #21	zbtb18 (ENSSTUG00000004007) #22	adss2 (ENSSTUG00000002645) #25	ENSSTUG00000002567	desi2 (ENSSTUG00000002547) #27	ENSSTUG00000002541	ENSSTUG00000002534	ENSSTUG00000002528	lhb (ENSSTUG00000002515)	COX20 (ENSSTUG00000002503) #28	ARFGEF3 (ENSSTUG00000001944)	perp (ENSSTUG00000001909)	TNFAIP3 (ENSSTUG00000001878)	olig3 (ENSSTUG00000001871)	ENSSTUG00000001866	ENSSTUG00000001844	ENSSTUG00000001827
Huchen	MODERN SPECIES	375									LRPPRC (ENSHHUG00000032380)	abcg8 (ENSHHUG00000032445)	ENSHHUG00000032510	abcg5 (ENSHHUG00000032512)	ENSHHUG00000032534 ##19	sdccag8 (ENSHHUG00000032545)	akt3a (ENSHHUG00000032573) #21	zbtb18 (ENSHHUG00000033366) #22	adss2 (ENSHHUG00000033374) #25	desi2 (ENSHHUG00000033691) #27	ENSHHUG00000033717	ENSHHUG00000033724	lhb (ENSHHUG00000033732)	cox20 (ENSHHUG00000033757)	ARFGEF3 (ENSHHUG00000033832)	perp (ENSHHUG00000033891)	TNFAIP3 (ENSHHUG00000033895)	olig3 (ENSHHUG00000033907)	ENSHHUG00000033918	ENSHHUG00000033956	IL22RA2 (ENSHHUG00000033971)	MAP3K21 (ENSHHUG00000033985)	ENSHHUG00000034054
Salmoninae	ANCESTRAL SPECIES	262																ENSGT00940000155092.b.j #22	ENSGT00390000015553.a.a.b.d #25	ENSGT00940000162691 #26	ENSGT00530000064150.b	ENSGT00530000063484.a.q	ENSGT00940000158448.l	ENSGT00940000160850.e	ENSGT00940000159629.f	ENSGT00940000157374.n	ENSGT00940000155393.d.sb.b.a	ENSGT00940000158236.b	ENSGT00390000013215.r	ENSGT00940000157628.f	ENSGT00390000012040.n	ENSGT00510000047893.e	ENSGT00940000156958.h
Huchen	MODERN SPECIES	8231																zbtb18 (ENSHHUG00000004403) #22
Salmoninae_a	ANCESTRAL SPECIES	109	ENSGT00530000063425.a.a.a.b.i.a.b	ENSGT00940000161424.k.b	ENSGT00730000111139.n	ENSGT00940000156503.v.b	ENSGT00830000128368.b.f	ENSGT00940000156844.b.h	ENSGT00940000155669.mc.b	ENSGT00940000153956.a.b.d	ENSGT00940000155896.k.b	ENSGT00940000155930.i.b	ENSGT00940000154711.a.a.f.b.b.a.b	ENSGT00940000158292.a.d	ENSGT00940000160346.B.h	ENSGT00390000010498	ENSGT00940000155103.a.a.f ##19	ENSGT00940000155092.b.j #22	ENSGT00390000015553.a.a.b.d #25	ENSGT00940000162691 #26	ENSGT00530000064150.b	ENSGT00530000063484.a.q	ENSGT00940000158448.l	ENSGT00940000160850.e	ENSGT00940000159629.f	ENSGT00940000157374.n	ENSGT00940000155393.d.sb.b.a	ENSGT00940000158236.b	ENSGT00390000013215.r	ENSGT00940000157628.f	ENSGT00390000012040.n	ENSGT00510000047893.e	ENSGT00940000156958.h
Salmo	ANCESTRAL SPECIES	31	ENSGT00530000063425.a.a.a.b.i.a.b	ENSGT00940000161424.k.b	ENSGT00730000111139.n	ENSGT00940000156503.v.b	ENSGT00830000128368.b.f	ENSGT00940000156844.b.g.b.a	ENSGT00940000153956.a.b.d	ENSGT00940000155896.k.b	ENSGT00940000155930.i.b	ENSGT00940000154711.a.a.f.a	ENSGT00940000158292.a.d	ENSGT00940000160346.B.h	ENSGT01060000253574	ENSGT00390000010498	ENSGT00940000155103.a.a.f ##19	ENSGT00940000155092.b.j #22	ENSGT00390000015553.a.a.b.d #25	ENSGT00940000162691 #26	ENSGT00530000064150.b	ENSGT00530000063484.a.q	ENSGT00940000158448.l	ENSGT00940000160850.e	ENSGT00940000159629.f	ENSGT00940000157374.n	ENSGT00940000155393.d.sb.b.a	ENSGT00940000158236.b	ENSGT00390000013215.r	ENSGT00940000157628.f	ENSGT00390000012040.n	ENSGT00510000047893.e	ENSGT00940000156958.h
Atlantic salmon	MODERN SPECIES		EPAS1 (ENSSSAG00000109681)	PRKCE (ENSSSAG00000093754)	ENSSSAG00000085194	ENSSSAG00000104933	SIX2 (ENSSSAG00000119938)	SIX3 (ENSSSAG00000114578)	ENSSSAG00000084864	ENSSSAG00000041239	ENSSSAG00000077037	ppm1b (ENSSSAG00000001582)	ENSSSAG00000100658	dync2li1 (ENSSSAG00000001573)	ENSSSAG00000001566 ##19	ENSSSAG00000087648 ##19	ENSSSAG00000084173	zbtb18 (ENSSSAG00000092530) #22	ADSS2 (ENSSSAG00000073688) #25	cssa01h1orf101 (ENSSSAG00000001256) #26	desi2 (ENSSSAG00000108208) #27	ARFGEF3 (ENSSSAG00000001219)	PERP (ENSSSAG00000083917)	TNFAIP3 (ENSSSAG00000001198)	OLIG3 (ENSSSAG00000001190)	ENSSSAG00000001126	ENSSSAG00000000815	rgs17 (ENSSSAG00000120198)	oprm1 (ENSSSAG00000000513)	ENSSSAG00000000497	ENSSSAG00000000473	cog2 (ENSSSAG00000000368)	pgbd5 (ENSSSAG00000116836)
River trout	MODERN SPECIES	9	ENSSTUG00000034666	ENSSTUG00000034684	ANKRD1 (ENSSTUG00000034734)	pcgf5a (ENSSTUG00000034751)	epas1b (ENSSTUG00000034798)	PRKCE (ENSSTUG00000034364)	ENSSTUG00000034778	six2a (ENSSTUG00000034788)	six3a (ENSSTUG00000034801)	ENSSTUG00000034804	ppm1ba (ENSSTUG00000034812)	ENSSTUG00000034826	dync2li1 (ENSSTUG00000034834)	ENSSTUG00000034860 ##19	ENSSTUG00000034883 #21	zbtb18 (ENSSTUG00000034886) #22	adss2 (ENSSTUG00000034902) #25	CATSPERE (ENSSTUG00000035398) #26	ARFGEF3 (ENSSTUG00000035507)	perp (ENSSTUG00000037356)	TNFAIP3 (ENSSTUG00000037365)	olig3 (ENSSTUG00000037384)	ENSSTUG00000037395	ENSSTUG00000037615	rgs17 (ENSSTUG00000038635)	oprm1 (ENSSTUG00000038656)	sf3b5 (ENSSTUG00000038667)	ENSSTUG00000038674	cog2 (ENSSTUG00000038737)	pgbd5 (ENSSTUG00000039104)	galnt2 (ENSSTUG00000039119)
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00530000063425.a.a.a.b.i.a.b	ENSGT00940000161424.k.b	ENSGT00730000111139.n	ENSGT00940000156503.v.a.a	ENSGT00830000128368.b.f	ENSGT00940000156844.b.h	ENSGT00940000155669.mc.b	ENSGT00940000153956.a.b.d	ENSGT00940000155896.k.b	ENSGT00940000155930.i.b	ENSGT00940000154711.a.a.f.b.b.a.b	ENSGT00940000158292.a.d	ENSGT00940000160346.B.h	ENSGT00390000010498	ENSGT00940000155103.a.a.f ##19	ENSGT00940000155092.b.j #22	ENSGT00390000015553.a.a.b.d #25	ENSGT00940000162691 #26	ENSGT00530000063484.a.q	ENSGT00940000158448.l	ENSGT00940000160850.e	ENSGT00940000159629.f	ENSGT00940000157374.n	ENSGT00940000155393.d.sb.b.a	ENSGT00940000158236.b	ENSGT00390000013215.r	ENSGT00940000157628.f	ENSGT00390000012040.n	ENSGT00510000047893.e	ENSGT00940000156958.h	ENSGT00390000009258.d
Rainbow trout	MODERN SPECIES	15	ENSOMYG00000034600	EPAS1 (ENSOMYG00000034554)	ENSOMYG00000067751	PRKCE (ENSOMYG00000053679)	ENSOMYG00000070625	ENSOMYG00000075494	SIX2 (ENSOMYG00000034438)	SIX3 (ENSOMYG00000034429)	ENSOMYG00000066182	ENSOMYG00000075334	ENSOMYG00000076673	ENSOMYG00000034347	ENSOMYG00000034328 ##19	ENSOMYG00000076456	ENSOMYG00000075446	ZBTB18 (ENSOMYG00000061402) #22	ENSOMYG00000034167 #25	CATSPERE (ENSOMYG00000034056) #26	PERP (ENSOMYG00000034042)	ENSOMYG00000034033	OLIG3 (ENSOMYG00000034015)	ENSOMYG00000068372	ENSOMYG00000070057	ENSOMYG00000033626	ENSOMYG00000063714	ENSOMYG00000033436	rgs17 (ENSOMYG00000033364)	oprm1 (ENSOMYG00000033340)	sf3b5 (ENSOMYG00000033335)	ENSOMYG00000065598	ENSOMYG00000033326
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT00530000063425.a.a.a.b.i.a.b	ENSGT00940000161424.k.b	ENSGT00730000111139.n	ENSGT00940000156503.v.a.a	ENSGT00830000128368.b.f	ENSGT00940000156844.b.g.b.b	ENSGT00940000155669.mc.b	ENSGT00940000153956.a.b.d	ENSGT00940000155896.k.b	ENSGT00940000155930.i.b	ENSGT00940000154711.a.a.f.b.b.a.b	ENSGT00940000158292.a.d	ENSGT00940000160346.B.h	ENSGT00390000010498	ENSGT00940000155103.a.a.f.c ##19	ENSGT00940000155092.b.j #22	ENSGT00390000015553.a.a.b.d #25	ENSGT00940000162691 #26	ENSGT00530000063484.a.q	ENSGT00940000158448.l	ENSGT00940000160850.e	ENSGT00940000159629.f	ENSGT00940000157374.n	ENSGT00940000155393.d.sb.b.a	ENSGT00940000158236.b	ENSGT00390000013215.r	ENSGT00940000157628.f	ENSGT00390000012040.n	ENSGT00510000047893.e	ENSGT00940000156958.h	ENSGT00390000009258.d
Coho salmon	MODERN SPECIES	2	GOLGA4 (ENSOKIG00005046116)	itga9 (ENSOKIG00005046299)	ENSOKIG00005046838	ENSOKIG00005046845	ENSOKIG00005046850	ENSOKIG00005046857	ANKRD1 (ENSOKIG00005046870)	ENSOKIG00005046875	EPAS1 (ENSOKIG00005046926)	PRKCE (ENSOKIG00005047241)	SIX2 (ENSOKIG00005047351)	SIX3 (ENSOKIG00005047364)	dync2li1 (ENSOKIG00005047370)	ENSOKIG00005047379 ##19	ENSOKIG00005047389	zbtb18 (ENSOKIG00005047392) #22	adss2 (ENSOKIG00005047413) #25	CATSPERE (ENSOKIG00005047643) #26	PERP (ENSOKIG00005047670)	TNFAIP3 (ENSOKIG00005047678)	OLIG3 (ENSOKIG00005047683)	ENSOKIG00005047696	PCNX2 (ENSOKIG00005047819)	rgs17 (ENSOKIG00005047848)	oprm1 (ENSOKIG00005047869)	ENSOKIG00005047894	cog2 (ENSOKIG00005047925)	pgbd5 (ENSOKIG00005047958)	galnt2 (ENSOKIG00005047971)	ENSOKIG00005048017	ABCB10 (ENSOKIG00005048030)
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	71																zbtb18 (ENSOTSG00005037395) #22	adss2 (ENSOTSG00005037195) #25	CATSPERE (ENSOTSG00005037184) #26	perp (ENSOTSG00005037180)	TNFAIP3 (ENSOTSG00005037179)	olig3 (ENSOTSG00005037178)	ENSOTSG00005037174	ENSOTSG00005037171	rgs17 (ENSOTSG00005037169)	oprm1 (ENSOTSG00005037164)	sf3b5 (ENSOTSG00005037162)	ENSOTSG00005037160	cog2 (ENSOTSG00005037075)	pgbd5 (ENSOTSG00005037072)	ENSOTSG00005037070	rasd4 (ENSOTSG00005037039)
Chinook salmon	MODERN SPECIES	71																zbtb18 (ENSOTSG00005035917) #22	adss2 (ENSOTSG00005035918) #25	CATSPERE (ENSOTSG00005037492) #26	perp (ENSOTSG00005037493)	TNFAIP3 (ENSOTSG00005037494)	olig3 (ENSOTSG00005037496)	ENSOTSG00005037498	ENSOTSG00005037503	rgs17 (ENSOTSG00005037515)	oprm1 (ENSOTSG00005037517)	sf3b5 (ENSOTSG00005037520)	ENSOTSG00005037524	cog2 (ENSOTSG00005037533)	pgbd5 (ENSOTSG00005037903)	ENSOTSG00005037904	ldlra (ENSOTSG00005037915)
Northern pike	MODERN SPECIES	4	SRBD1 (ENSELUG00000012592)	six2a (ENSELUG00000012613)	six3a (ENSELUG00000012653)	ENSELUG00000025773	CAMKMT (ENSELUG00000012689)	prepl (ENSELUG00000012723)	SLC3A1 (ENSELUG00000012737)	ppm1ba (ENSELUG00000012758)	LRPPRC (ENSELUG00000012803)	abcg8 (ENSELUG00000012850)	abcg5 (ENSELUG00000013020)	dync2li1 (ENSELUG00000013196)	ENSELUG00000013292 ##19	sdccag8 (ENSELUG00000013397)	akt3a (ENSELUG00000000498) #21	zbtb18 (ENSELUG00000013471) #22	adss2 (ENSELUG00000013493) #25	ENSELUG00000013545 #26	desi2 (ENSELUG00000013596) #27	ENSELUG00000013685	ENSELUG00000029260	lhb (ENSELUG00000013716)	COX20 (ENSELUG00000029049) #28	ARFGEF3 (ENSELUG00000013850)	perp (ENSELUG00000013897)	TNFAIP3 (ENSELUG00000013988)	olig3 (ENSELUG00000014013)	ifngr1 (ENSELUG00000014021)	IL22RA2 (ENSELUG00000014043)	MAP3K21 (ENSELUG00000014068)	PCNX2 (ENSELUG00000001499)
Acanthomorphata	ANCESTRAL SPECIES	24												ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a	ENSGT00940000156955.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	6	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a	ENSGT00940000156955.a.a
Pinecone sodierfish	MODERN SPECIES	6	abcg5 (ENSMMDG00005013426)	dync2li1 (ENSMMDG00005013482)	lyrm7 (ENSMMDG00005013487)	hint1 (ENSMMDG00005013490)	ENSMMDG00005013494 ##19	ENSMMDG00005013506 ##19	ENSMMDG00005013511 ##19	rtkn2 (ENSMMDG00005013517)	ENSMMDG00005013531	ENSMMDG00005013550	TMEM26 (ENSMMDG00005013562)	perp (ENSMMDG00005013564)	TNFAIP3 (ENSMMDG00005013567)	sdccag8 (ENSMMDG00005013569)	akt3a (ENSMMDG00005013587) #21	zbtb18 (ENSMMDG00005014370) #22	adss2 (ENSMMDG00005014388) #25	ENSMMDG00005014525	slc29a1a (ENSMMDG00005014529)	atl2 (ENSMMDG00005014642)	olig3 (ENSMMDG00005018221)	ENSMMDG00005018223	il22ra2 (ENSMMDG00005018224)	MAP3K21 (ENSMMDG00005018229)	rgs17 (ENSMMDG00005018232)	oprm1 (ENSMMDG00005018237)	sf3b5 (ENSMMDG00005018241)	ENSMMDG00005018243	ENSMMDG00005018244	plekha1a (ENSMMDG00005018247)	htra1a (ENSMMDG00005018257)
Percomorphaceae	ANCESTRAL SPECIES	5	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a	ENSGT00940000156955.a.a
Tiger tail seahorse	MODERN SPECIES	512	LRPPRC (ENSHCOG00000002107)	abcg8 (ENSHCOG00000002122)	abcg5 (ENSHCOG00000002138)	dync2li1 (ENSHCOG00000002149)	lyrm7 (ENSHCOG00000002155)	HINT1 (ENSHCOG00000002161)	ENSHCOG00000002169 ##19	rtkn2 (ENSHCOG00000002234)	ENSHCOG00000002265	ENSHCOG00000002282	TMEM26 (ENSHCOG00000002289)	perp (ENSHCOG00000002293)	TNFAIP3 (ENSHCOG00000002309)	ENSHCOG00000002325	akt3a (ENSHCOG00000002340) #21	zbtb18 (ENSHCOG00000002345) #22	adss2 (ENSHCOG00000002364) #25	slc29a1a (ENSHCOG00000002391)	atl2 (ENSHCOG00000002418)	olig3 (ENSHCOG00000002447)	ENSHCOG00000002461	ENSHCOG00000002474	ppp2r5d (ENSHCOG00000002595)	mea1 (ENSHCOG00000002628)	ENSHCOG00000002634	EML4 (ENSHCOG00000002665)	tspan14 (ENSHCOG00000002685)	prph2b (ENSHCOG00000002689)	ncoa4 (ENSHCOG00000002698)	yipf3 (ENSHCOG00000002709)	dnph1 (ENSHCOG00000002717)
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Cyprinodontiformes	ANCESTRAL SPECIES	17	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Aplocheiloidei	ANCESTRAL SPECIES	22	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a	ENSGT00940000156955.a.a	ENSGT00390000015768.i.a
Mangrove rivulus	MODERN SPECIES	3	ppm1ba (ENSKMAG00000003335)	LRPPRC (ENSKMAG00000003287)	abcg8 (ENSKMAG00000003252)	abcg5 (ENSKMAG00000003228)	lyrm7 (ENSKMAG00000003198)	dync2li1 (ENSKMAG00000003136)	HINT1 (ENSKMAG00000003173)	ENSKMAG00000003108 ##19	rtkn2 (ENSKMAG00000002984)	ENSKMAG00000002943	TMEM26 (ENSKMAG00000002928)	perp (ENSKMAG00000002922)	TNFAIP3 (ENSKMAG00000002916)	sdccag8 (ENSKMAG00000002874)	akt3a (ENSKMAG00000002799) #21	zbtb18 (ENSKMAG00000002780) #22	adss2 (ENSKMAG00000002730) #25	slc29a1a (ENSKMAG00000002707)	ENSKMAG00000002694	atl2 (ENSKMAG00000002626)	ENSKMAG00000002583	olig3 (ENSKMAG00000002574)	ifngr1l (ENSKMAG00000002515)	il22ra2 (ENSKMAG00000002473)	MAP3K21 (ENSKMAG00000002459)	ENSKMAG00000002341	rgs17 (ENSKMAG00000002316)	oprm1 (ENSKMAG00000002258)	sf3b5 (ENSKMAG00000002249)	ENSKMAG00000002199	plekha1a (ENSKMAG00000002103)
Turquoise killifish	MODERN SPECIES	1612	LRPPRC (ENSNFUG00015002145)	abcg8 (ENSNFUG00015002002)	abcg5 (ENSNFUG00015001941)	dync2li1 (ENSNFUG00015001890)	ENSNFUG00015001877	lyrm7 (ENSNFUG00015001863)	HINT1 (ENSNFUG00015001856)	ENSNFUG00015001848 ##19	RTKN2 (ENSNFUG00015001824)	ARID5B (ENSNFUG00015001816)	CU638868.1 (ENSNFUG00015001807)	PERP (ENSNFUG00015001804)	TNFAIP3 (ENSNFUG00015001797)	sdccag8 (ENSNFUG00015001774)	AKT3 (ENSNFUG00015001157) #21	zbtb18 (ENSNFUG00015001018) #22	adss2 (ENSNFUG00015000797) #25	Nfu_g_1_002753 (ENSNFUG00015000716)	ENSNFUG00015000713	SLC29A1 (ENSNFUG00015000626)	ATL2 (ENSNFUG00015000572)	ifngr1l (ENSNFUG00015000548)	il22ra2 (ENSNFUG00015000538)	MAP3K21 (ENSNFUG00015000528)	PCNXL2 (ENSNFUG00015000492)	rgs17 (ENSNFUG00015000455)	ENSNFUG00015000449	ENSNFUG00015000445	oprm1 (ENSNFUG00015000439)	sf3b5 (ENSNFUG00015000433)	ENSNFUG00015000402
Cyprinodontoidei	ANCESTRAL SPECIES	14	ENSGT00940000156070.a.a	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Poeciliinae	ANCESTRAL SPECIES	16	ENSGT00940000156070.a.a	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162287.A.i.a	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Poecilia	ANCESTRAL SPECIES	11	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00940000163584.b.a.a	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a	ENSGT00940000156955.a.a
NAME_6	ANCESTRAL SPECIES	147	ENSGT00940000156070.a.a	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00940000162287.A.i.a
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	2468																zbtb18 (ENSPLAG00000011299) #22	adss2 (ENSPLAG00000011287) #25	ENSPLAG00000011254
Sailfin molly	MODERN SPECIES	887											ENSPLAG00000021127	perp (ENSPLAG00000021117)	TNFAIP3 (ENSPLAG00000021108)	sdccag8 (ENSPLAG00000021054)	akt3a (ENSPLAG00000021029) #21	zbtb18 (ENSPLAG00000020960) #22
Amazon molly	MODERN SPECIES	292	znhit2 (ENSPFOG00000020702)	lrpprc (ENSPFOG00000011227)	abcg8 (ENSPFOG00000011707)	abcg5 (ENSPFOG00000011857)	dync2li1 (ENSPFOG00000023238)	lyrm7 (ENSPFOG00000012016)	hint1 (ENSPFOG00000012020)	ENSPFOG00000012044 ##19	rtkn2 (ENSPFOG00000012203)	ENSPFOG00000012334	TMEM26 (ENSPFOG00000012416)	perp (ENSPFOG00000012460)	TNFAIP3 (ENSPFOG00000012492)	sdccag8 (ENSPFOG00000012530)	akt3a (ENSPFOG00000012618) #21	zbtb18 (ENSPFOG00000022080) #22	adss2 (ENSPFOG00000012838) #25	ENSPFOG00000012948
Guppy	MODERN SPECIES	445	tk2 (ENSPREG00000007831)	nvl (ENSPREG00000007896)	degs1 (ENSPREG00000007946)	fbxo28 (ENSPREG00000007956)	polr1c (ENSPREG00000007985)	zswim8 (ENSPREG00000008007)	NDST2 (ENSPREG00000008066)	rtkn2 (ENSPREG00000008088)	ENSPREG00000008128	ENSPREG00000008156	TMEM26 (ENSPREG00000008176)	perp (ENSPREG00000008201)	TNFAIP3 (ENSPREG00000008233)	sdccag8 (ENSPREG00000008340)	akt3a (ENSPREG00000008535) #21	zbtb18 (ENSPREG00000008576) #22	adss2 (ENSPREG00000008593) #25	slc29a1a (ENSPREG00000008631)	atl2 (ENSPREG00000008709)	olig3 (ENSPREG00000008985)	ifngr1l (ENSPREG00000009016)	il22ra2 (ENSPREG00000009057)	MAP3K21 (ENSPREG00000009089)	ENSPREG00000009125	rgs17 (ENSPREG00000009180)	oprm1 (ENSPREG00000009202)	sf3b5 (ENSPREG00000009242)	ENSPREG00000009269	plekha1a (ENSPREG00000009317)	htra1a (ENSPREG00000009412)	WAPL (ENSPREG00000009439)
Platyfish	MODERN SPECIES	14	znhit2 (ENSXMAG00000025544)	lrpprc (ENSXMAG00000018108)	abcg8 (ENSXMAG00000018127)	abcg5 (ENSXMAG00000018141)	dync2li1 (ENSXMAG00000021360)	lyrm7 (ENSXMAG00000018169)	hint1 (ENSXMAG00000023903)	ENSXMAG00000018174 ##19	rtkn2 (ENSXMAG00000018196)	ENSXMAG00000027181	TMEM26 (ENSXMAG00000029874)	perp (ENSXMAG00000015728)	TNFAIP3 (ENSXMAG00000026936)	sdccag8 (ENSXMAG00000018224)	akt3a (ENSXMAG00000013812) #21	zbtb18 (ENSXMAG00000018241) #22	adss2 (ENSXMAG00000023665) #25	ENSXMAG00000022242	slc29a1a (ENSXMAG00000018265)	atl2 (ENSXMAG00000018291)	olig3 (ENSXMAG00000018245)	ifngr1l (ENSXMAG00000018306)	ENSXMAG00000025899	MAP3K21 (ENSXMAG00000018313)	ENSXMAG00000027645	rgs17 (ENSXMAG00000003037)	ENSXMAG00000021135	oprm1 (ENSXMAG00000018317)	sf3b5 (ENSXMAG00000019971)	ENSXMAG00000018331	ENSXMAG00000023319
NAME_4	ANCESTRAL SPECIES	2	ENSGT00940000156070.a.a	ENSGT00390000017147	ENSGT00390000016775	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923.d	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a	ENSGT00940000156955.a.a
Mummichog	MODERN SPECIES	2217	lrpprc (ENSFHEG00000019604)	abcg8 (ENSFHEG00000019645)	abcg5 (ENSFHEG00000019752)	dync2li1 (ENSFHEG00000019766)	lyrm7 (ENSFHEG00000019787)	ENSFHEG00000019798 ##19	ENSFHEG00000000503 ##19	rtkn2 (ENSFHEG00000019814)	ENSFHEG00000019823	ENSFHEG00000019838	ENSFHEG00000019849	perp (ENSFHEG00000019851)	TNFAIP3 (ENSFHEG00000019954)	sdccag8 (ENSFHEG00000019964)	akt3a (ENSFHEG00000019997) #21	zbtb18 (ENSFHEG00000020005) #22	adss2 (ENSFHEG00000020040) #25	ENSFHEG00000020050	slc29a1a (ENSFHEG00000020143)	atl2 (ENSFHEG00000020160)	olig3 (ENSFHEG00000020177)	ENSFHEG00000020185	il22ra2 (ENSFHEG00000020213)	MAP3K21 (ENSFHEG00000020220)	ENSFHEG00000020238	rgs17 (ENSFHEG00000020269)	oprm1 (ENSFHEG00000020294)	sf3b5 (ENSFHEG00000020301)	ENSFHEG00000020317	plekha1a (ENSFHEG00000020355)	htra1a (ENSFHEG00000020419)
Sheepshead minnow	MODERN SPECIES	1027										TMEM26 (ENSCVAG00000016937)	SDHAF4 (ENSCVAG00000016913)	perp (ENSCVAG00000016897)	TNFAIP3 (ENSCVAG00000016885)	sdccag8 (ENSCVAG00000016839)	akt3a (ENSCVAG00000016822) #21	zbtb18 (ENSCVAG00000016785) #22	ENSCVAG00000016774
Oryzias	ANCESTRAL SPECIES	6	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00940000163584.b.a.a	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a	ENSGT00940000156955.a.a
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00390000017147	ENSGT00390000016775	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l.k	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a	ENSGT00940000156955.a.a
Chinese medaka	MODERN SPECIES	182		abcg8 (ENSOSIG00000010847)	abcg5 (ENSOSIG00000010822)	dync2li1 (ENSOSIG00000010816)	lyrm7 (ENSOSIG00000010812)	HINT1 (ENSOSIG00000010811)	ENSOSIG00000010808 ##19	rtkn2 (ENSOSIG00000010806)	ENSOSIG00000010801	ENSOSIG00000010799	ENSOSIG00000010796	perp (ENSOSIG00000010792)	TNFAIP3 (ENSOSIG00000010771)	sdccag8 (ENSOSIG00000010767)	akt3a (ENSOSIG00000005595) #21	zbtb18 (ENSOSIG00000005560) #22	adss2 (ENSOSIG00000005288) #25	slc29a1a (ENSOSIG00000004607)	atl2 (ENSOSIG00000004464)	olig3 (ENSOSIG00000004460)	ENSOSIG00000004458	ENSOSIG00000004451	il22ra2 (ENSOSIG00000004448)	MAP3K21 (ENSOSIG00000004439)	ENSOSIG00000003627	rgs17 (ENSOSIG00000003580)	oprm1 (ENSOSIG00000003550)	sf3b5 (ENSOSIG00000023454)	ENSOSIG00000023451	plekha1a (ENSOSIG00000023446)	htra1b (ENSOSIG00000023433)
Japanese Medaka HdrR	MODERN SPECIES	6	abcg8 (ENSORLG00000004629)	abcg5 (ENSORLG00000004654)	dync2li1 (ENSORLG00000004674)	lyrm7 (ENSORLG00000028115)	HINT1 (ENSORLG00000004689)	ENSORLG00000004725 ##19	rtkn2 (ENSORLG00000004745)	ENSORLG00000004756	ENSORLG00000004760	ENSORLG00000028945	perp (ENSORLG00000004769)	ENSORLG00000023065	TNFAIP3 (ENSORLG00000004784)	sdccag8 (ENSORLG00000030102)	akt3a (ENSORLG00000004813) #21	zbtb18 (ENSORLG00000027425) #22	adss2 (ENSORLG00000004855) #25	slc29a1a (ENSORLG00000004888)	atl2 (ENSORLG00000026240)	ENSORLG00000026098	ifngr1l (ENSORLG00000019059)	il22ra2 (ENSORLG00000019053)	MAP3K21 (ENSORLG00000025684)	ENSORLG00000025475	rgs17 (ENSORLG00000004914)	ENSORLG00000025384	oprm1 (ENSORLG00000004921)	sf3b5 (ENSORLG00000004925)	ENSORLG00000004937	plekha1a (ENSORLG00000004953)	htra1a (ENSORLG00000025310)
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00940000163584.b.a.a	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a	ENSGT00940000156955.a.a
Indian medaka	MODERN SPECIES	27	znhit2 (ENSOMEG00000011883)	ENSOMEG00000011863	abcg8 (ENSOMEG00000011805)	abcg5 (ENSOMEG00000011742)	dync2li1 (ENSOMEG00000011690)	ENSOMEG00000000276	HINT1 (ENSOMEG00000011624)	ENSOMEG00000011596 ##19	rtkn2 (ENSOMEG00000011530)	ENSOMEG00000011504	ENSOMEG00000011480	perp (ENSOMEG00000011464)	TNFAIP3 (ENSOMEG00000011421)	sdccag8 (ENSOMEG00000011399)	akt3a (ENSOMEG00000011336) #21	zbtb18 (ENSOMEG00000011249) #22	adss2 (ENSOMEG00000011229) #25	slc29a1a (ENSOMEG00000011165)	atl2 (ENSOMEG00000011049)	olig3 (ENSOMEG00000010996)	ENSOMEG00000010982	ENSOMEG00000010968	il22ra2 (ENSOMEG00000010914)	MAP3K21 (ENSOMEG00000010875)	ENSOMEG00000010784	rgs17 (ENSOMEG00000010707)	oprm1 (ENSOMEG00000010670)	sf3b5 (ENSOMEG00000010620)	ENSOMEG00000000256	ENSOMEG00000010600	plekha1a (ENSOMEG00000010570)
Javanese ricefish	MODERN SPECIES	6	abcg5 (ENSOJAG00000014776)	dync2li1 (ENSOJAG00000015129)	lyrm7 (ENSOJAG00000015144)	HINT1 (ENSOJAG00000015150)	ENSOJAG00000015173 ##19	ENSOJAG00000015200 ##19	ENSOJAG00000015205 ##19	rtkn2 (ENSOJAG00000015213)	ENSOJAG00000015223	ENSOJAG00000015241	ENSOJAG00000015244	perp (ENSOJAG00000015251)	TNFAIP3 (ENSOJAG00000015262)	sdccag8 (ENSOJAG00000015280)	akt3a (ENSOJAG00000015306) #21	zbtb18 (ENSOJAG00000015463) #22	adss2 (ENSOJAG00000015530) #25	slc29a1a (ENSOJAG00000016059)	atl2 (ENSOJAG00000016381)	olig3 (ENSOJAG00000017214)	ENSOJAG00000017230	ENSOJAG00000017261	il22ra2 (ENSOJAG00000017275)	MAP3K21 (ENSOJAG00000017282)	rgs17 (ENSOJAG00000017326)	oprm1 (ENSOJAG00000017355)	sf3b5 (ENSOJAG00000017386)	ENSOJAG00000017396	plekha1a (ENSOJAG00000017445)	htra1a (ENSOJAG00000017542)	WAPL (ENSOJAG00000017696)
Ovalentaria_B	ANCESTRAL SPECIES	7	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Pomacentridae	ANCESTRAL SPECIES	9	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Pomacentridae_A	ANCESTRAL SPECIES	7	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Amphiprion	ANCESTRAL SPECIES	13	ENSGT00390000017147	ENSGT00390000016775	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292.c	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b.a #25	ENSGT00940000170915	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000162903.b.j	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Clown anemonefish	MODERN SPECIES	984																zbtb18 (ENSAOCG00000014105) #22	ENSAOCG00000014098 #25
Orange clownfish	MODERN SPECIES	12	lrpprc (ENSAPEG00000002937)	abcg8 (ENSAPEG00000003259)	abcg5 (ENSAPEG00000003332)	dync2li1 (ENSAPEG00000003385)	lyrm7 (ENSAPEG00000003427)	HINT1 (ENSAPEG00000003438)	ENSAPEG00000003452 ##19	ENSAPEG00000003488 ##19	rtkn2 (ENSAPEG00000003504)	ENSAPEG00000003571	TMEM26 (ENSAPEG00000003583)	perp (ENSAPEG00000003596)	TNFAIP3 (ENSAPEG00000003648)	sdccag8 (ENSAPEG00000003698)	akt3a (ENSAPEG00000003761) #21	zbtb18 (ENSAPEG00000003817) #22	adss2 (ENSAPEG00000003837) #25	ENSAPEG00000003893	slc29a1a (ENSAPEG00000003912)	ENSAPEG00000003971	ENSAPEG00000003997	atl2 (ENSAPEG00000004035)	olig3 (ENSAPEG00000004093)	ENSAPEG00000004112	il22ra2 (ENSAPEG00000004149)	ENSAPEG00000004183	MAP3K21 (ENSAPEG00000004226)	ENSAPEG00000004313	rgs17 (ENSAPEG00000004417)	oprm1 (ENSAPEG00000004468)	sf3b5 (ENSAPEG00000004605)
Spiny chromis	MODERN SPECIES	1217																zbtb18 (ENSAPOG00000005168) #22	adss2 (ENSAPOG00000005229) #25	ENSAPOG00000000128	slc29a1a (ENSAPOG00000005289)	atl2 (ENSAPOG00000005318)
Bicolor damselfish	MODERN SPECIES	1654															akt3a (ENSSPAG00000002712) #21	zbtb18 (ENSSPAG00000002691) #22	adss2 (ENSSPAG00000002642) #25	ENSSPAG00000002623
Cichlidae	ANCESTRAL SPECIES	13	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l.j	ENSGT00390000014794.b.l.i	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT00940000158231.k	ENSGT00940000157314.B	ENSGT00510000048978	ENSGT00940000158231.l	ENSGT00390000016499	ENSGT00940000177543	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374
Midas cichlid	MODERN SPECIES	230	abcg8 (ENSACIG00000009550)	abcg5 (ENSACIG00000009500)	dync2li1 (ENSACIG00000009413)	lyrm7 (ENSACIG00000009391)	HINT1 (ENSACIG00000009379)	ENSACIG00000009226 ##19	rtkn2 (ENSACIG00000009174)	ENSACIG00000009094	ENSACIG00000009064	TMEM26 (ENSACIG00000009049)	ENSACIG00000009026	perp (ENSACIG00000008992)	TNFAIP3 (ENSACIG00000008951)	sdccag8 (ENSACIG00000008724)	akt3a (ENSACIG00000008675) #21	zbtb18 (ENSACIG00000008655) #22	adss2 (ENSACIG00000008631) #25	ENSACIG00000008611	slc29a1a (ENSACIG00000008586)	atl2 (ENSACIG00000008419)	olig3 (ENSACIG00000008385)	ENSACIG00000008372	il22ra2 (ENSACIG00000008359)	MAP3K21 (ENSACIG00000008331)	ENSACIG00000008183	rgs17 (ENSACIG00000008137)	oprm1 (ENSACIG00000008114)	sf3b5 (ENSACIG00000008106)	ENSACIG00000008090	ENSACIG00000008082	plekha1a (ENSACIG00000008060)
Pseudocrenilabrinae	ANCESTRAL SPECIES	16	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l.j	ENSGT00390000014794.b.l.i	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11	ENSGT00390000016775	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l.j	ENSGT00390000014794.b.l.i	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT00940000158231.k	ENSGT00940000157314.B	ENSGT00510000048978	ENSGT00940000158231.l	ENSGT00390000016499	ENSGT00940000177543	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374
Haplochromini	ANCESTRAL SPECIES	10	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l.j	ENSGT00390000014794.b.l.i	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000170915	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT00940000158231.k	ENSGT00940000157314.B	ENSGT00510000048978	ENSGT00940000158231.l	ENSGT00390000016499	ENSGT00940000177543	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374
Burton s mouthbrooder	MODERN SPECIES	389	LRPPRC (ENSHBUG00000000393)	abcg8 (ENSHBUG00000013398)	abcg5 (ENSHBUG00000013446)	dync2li1 (ENSHBUG00000013465)	lyrm7 (ENSHBUG00000013475)	HINT1 (ENSHBUG00000013488)	ENSHBUG00000013507 ##19	rtkn2 (ENSHBUG00000013530)	ENSHBUG00000013535	ENSHBUG00000013546	TMEM26 (ENSHBUG00000013553)	perp (ENSHBUG00000013564)	TNFAIP3 (ENSHBUG00000013574)	sdccag8 (ENSHBUG00000013586)	akt3a (ENSHBUG00000013641) #21	zbtb18 (ENSHBUG00000013654) #22	adss2 (ENSHBUG00000013728) #25	ENSHBUG00000013736	slc29a1a (ENSHBUG00000013779)	atl2 (ENSHBUG00000000962)	olig3 (ENSHBUG00000013817)	ENSHBUG00000013828	ifngr1l (ENSHBUG00000013834)	il22ra2 (ENSHBUG00000013856)	MAP3K21 (ENSHBUG00000013868)	ENSHBUG00000013904	rgs17 (ENSHBUG00000013921)
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00390000016775	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l.j	ENSGT00390000014794.b.l.i	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000170915	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000181845	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
P. nyererei	MODERN SPECIES	319	abcg5 (ENSPNYG00000001001)	dync2li1 (ENSPNYG00000001085)	lyrm7 (ENSPNYG00000001196)	HINT1 (ENSPNYG00000001225)	ENSPNYG00000001237 ##19	ENSPNYG00000001283 ##19	ENSPNYG00000001320 ##19	rtkn2 (ENSPNYG00000001342)	ENSPNYG00000001379	ENSPNYG00000001389	TMEM26 (ENSPNYG00000001400)	perp (ENSPNYG00000001417)	TNFAIP3 (ENSPNYG00000001423)	sdccag8 (ENSPNYG00000001441)	akt3a (ENSPNYG00000001456) #21	zbtb18 (ENSPNYG00000001530) #22	adss2 (ENSPNYG00000001538) #25	ENSPNYG00000001589	slc29a1a (ENSPNYG00000001623)	atl2 (ENSPNYG00000001670)	ENSPNYG00000001711	olig3 (ENSPNYG00000001716)	ENSPNYG00000001735	ifngr1l (ENSPNYG00000001752)	ENSPNYG00000001772	MAP3K21 (ENSPNYG00000001800)	ENSPNYG00000001844	rgs17 (ENSPNYG00000001877)	ENSPNYG00000001887	oprm1 (ENSPNYG00000001911)	sf3b5 (ENSPNYG00000002075)
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00390000016775	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l.j	ENSGT00390000014794.b.l.i	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT01100000263491.a.b.a.b.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT00940000158231.k.d	ENSGT00940000157314.B	ENSGT00510000048978	ENSGT00940000158231.l	ENSGT00390000016499	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d
Eastern happy	MODERN SPECIES	4	lyrm7 (ENSACLG00000023582)	HINT1 (ENSACLG00000023571)	ENSACLG00000023560	ENSACLG00000023499 ##19	rtkn2 (ENSACLG00000023374)	ENSACLG00000023357	ENSACLG00000023345	ENSACLG00000023327	ENSACLG00000023319	TMEM26 (ENSACLG00000023292)	perp (ENSACLG00000023286)	TNFAIP3 (ENSACLG00000023278)	ENSACLG00000023271	sdccag8 (ENSACLG00000023258)	akt3a (ENSACLG00000022987) #21	zbtb18 (ENSACLG00000022978) #22	adss2 (ENSACLG00000022935) #25	ENSACLG00000022922	slc29a1a (ENSACLG00000022836)	atl2 (ENSACLG00000022724)	olig3 (ENSACLG00000022698)	ENSACLG00000022686	ENSACLG00000022665	il22ra2 (ENSACLG00000022643)	MAP3K21 (ENSACLG00000022570)	ENSACLG00000022496	rgs17 (ENSACLG00000022474)	oprm1 (ENSACLG00000022417)	sf3b5 (ENSACLG00000022410)	ENSACLG00000022329	plekha1a (ENSACLG00000022157)
Zebra mbuna	MODERN SPECIES	1095	lrpprc (ENSMZEG00005027379)	abcg8 (ENSMZEG00005027380)	abcg5 (ENSMZEG00005027381)	dync2li1 (ENSMZEG00005027382)	lyrm7 (ENSMZEG00005027383)	HINT1 (ENSMZEG00005027384)	ENSMZEG00005027385 ##19	rtkn2 (ENSMZEG00005027386)	ENSMZEG00005027387	ENSMZEG00005027388	TMEM26 (ENSMZEG00005027389)	perp (ENSMZEG00005027390)	TNFAIP3 (ENSMZEG00005027391)	sdccag8 (ENSMZEG00005027392)	akt3a (ENSMZEG00005027393) #21	zbtb18 (ENSMZEG00005027394) #22	adss2 (ENSMZEG00005027395) #25	ENSMZEG00005027396	slc29a1a (ENSMZEG00005027397)	atl2 (ENSMZEG00005027398)	olig3 (ENSMZEG00005027399)	ENSMZEG00005027400	ifngr1l (ENSMZEG00005027401)	il22ra2 (ENSMZEG00005027402)	MAP3K21 (ENSMZEG00005027403)	ENSMZEG00005027404	rgs17 (ENSMZEG00005027405)	oprm1 (ENSMZEG00005027406)	sf3b5 (ENSMZEG00005027407)	sf3b5 (ENSMZEG00005027408)	ENSMZEG00005027409
Lyretail cichlid	MODERN SPECIES	295	abcg8 (ENSNBRG00000013349)	abcg5 (ENSNBRG00000013371)	dync2li1 (ENSNBRG00000013406)	lyrm7 (ENSNBRG00000013469)	HINT1 (ENSNBRG00000013475)	ENSNBRG00000013491 ##19	ENSNBRG00000013538 ##19	rtkn2 (ENSNBRG00000013547)	ENSNBRG00000013572	ENSNBRG00000013595	TMEM26 (ENSNBRG00000013685)	perp (ENSNBRG00000013699)	TNFAIP3 (ENSNBRG00000013705)	sdccag8 (ENSNBRG00000013726)	akt3a (ENSNBRG00000013765) #21	zbtb18 (ENSNBRG00000013796) #22	adss2 (ENSNBRG00000013805) #25	ENSNBRG00000013838	slc29a1a (ENSNBRG00000013852)	ENSNBRG00000013863	ENSNBRG00000013877	olig3 (ENSNBRG00000013883)	ENSNBRG00000013891	ENSNBRG00000013899	il22ra2 (ENSNBRG00000013909)	MAP3K21 (ENSNBRG00000013930)	ENSNBRG00000013993	rgs17 (ENSNBRG00000014144)	ENSNBRG00000014176	oprm1 (ENSNBRG00000014216)	sf3b5 (ENSNBRG00000014383)
Nile tilapia	MODERN SPECIES	4	abcg8 (ENSONIG00000000915)	abcg5 (ENSONIG00000000911)	dync2li1 (ENSONIG00000000903)	lyrm7 (ENSONIG00000038754)	HINT1 (ENSONIG00000000901)	ENSONIG00000000895 ##19	rtkn2 (ENSONIG00000000891)	ENSONIG00000000889	ENSONIG00000036569	TMEM26 (ENSONIG00000000883)	perp (ENSONIG00000034050)	TNFAIP3 (ENSONIG00000000871)	sdccag8 (ENSONIG00000000867)	akt3a (ENSONIG00000028761) #21	ENSONIG00000037528	zbtb18 (ENSONIG00000035226) #22	adss2 (ENSONIG00000000852) #25	ENSONIG00000027807	slc29a1a (ENSONIG00000000841)	atl2 (ENSONIG00000000835)	olig3 (ENSONIG00000020727)	ENSONIG00000042557	ifngr1l (ENSONIG00000036638)	il22ra2 (ENSONIG00000000832)	MAP3K21 (ENSONIG00000000824)	ENSONIG00000000808	rgs17 (ENSONIG00000000804)	oprm1 (ENSONIG00000039219)	sf3b5 (ENSONIG00000020725)	ENSONIG00000000794	plekha1a (ENSONIG00000000790)
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000156772.b.c.b.b	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000156772.b.c.b.b	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628
Carangaria	ANCESTRAL SPECIES	19	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000156772.b.c.b.b	ENSGT00940000160850	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Carangaria_A	ANCESTRAL SPECIES	25	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a	ENSGT00940000156955.a.a
Seriola	ANCESTRAL SPECIES	17	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a	ENSGT00940000156955.a.a
Greater amberjack	MODERN SPECIES	147	LRPPRC (ENSSDUG00000019062)	abcg8 (ENSSDUG00000019028)	abcg5 (ENSSDUG00000018988)	dync2li1 (ENSSDUG00000018961)	lyrm7 (ENSSDUG00000018920)	HINT1 (ENSSDUG00000018899)	ENSSDUG00000018865 ##19	rtkn2 (ENSSDUG00000018837)	ENSSDUG00000018825	ENSSDUG00000018806	TMEM26 (ENSSDUG00000018793)	perp (ENSSDUG00000018785)	TNFAIP3 (ENSSDUG00000018768)	sdccag8 (ENSSDUG00000018731)	akt3a (ENSSDUG00000018670) #21	zbtb18 (ENSSDUG00000018660) #22	adss2 (ENSSDUG00000018624) #25	ENSSDUG00000018610	slc29a1a (ENSSDUG00000018546)	atl2 (ENSSDUG00000018523)	olig3 (ENSSDUG00000018499)	ENSSDUG00000018464	il22ra2 (ENSSDUG00000018452)	MAP3K21 (ENSSDUG00000018434)	ENSSDUG00000018258	rgs17 (ENSSDUG00000018231)	oprm1 (ENSSDUG00000018173)	sf3b5 (ENSSDUG00000018161)	ENSSDUG00000018132	plekha1a (ENSSDUG00000018073)	htra1a (ENSSDUG00000018023)
Yellowtail amberjack	MODERN SPECIES	3235	abcg8 (ENSSLDG00000022986)	abcg5 (ENSSLDG00000022948)	dync2li1 (ENSSLDG00000022921)	lyrm7 (ENSSLDG00000022910)	HINT1 (ENSSLDG00000022907)	ENSSLDG00000022816 ##19	rtkn2 (ENSSLDG00000022772)	ENSSLDG00000022755	ENSSLDG00000022745	TMEM26 (ENSSLDG00000022739)	perp (ENSSLDG00000022737)	TNFAIP3 (ENSSLDG00000022659)	ENSSLDG00000022639	sdccag8 (ENSSLDG00000022622)	akt3a (ENSSLDG00000022587) #21	zbtb18 (ENSSLDG00000022573) #22	adss2 (ENSSLDG00000022536) #25	ENSSLDG00000022517	slc29a1a (ENSSLDG00000022484)	atl2 (ENSSLDG00000022433)	olig3 (ENSSLDG00000022424)	ENSSLDG00000022414
Barramundi perch	MODERN SPECIES	340	abcg8 (ENSLCAG00010012790)	abcg5 (ENSLCAG00010012746)	dync2li1 (ENSLCAG00010012733)	lyrm7 (ENSLCAG00010012724)	ENSLCAG00010012723	ENSLCAG00010012717	ENSLCAG00010012713 ##19	ENSLCAG00010012685 ##19	rtkn2 (ENSLCAG00010012679)	ENSLCAG00010012653	TMEM26 (ENSLCAG00010012641)	perp (ENSLCAG00010012634)	TNFAIP3 (ENSLCAG00010012629)	sdccag8 (ENSLCAG00010012619)	akt3a (ENSLCAG00010012110) #21	zbtb18 (ENSLCAG00010011956) #22	adss2 (ENSLCAG00010011845) #25	ENSLCAG00010011809	slc29a1a (ENSLCAG00010011763)
Pleuronectoidei	ANCESTRAL SPECIES	25	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000164807.G.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000156772.b.c.b.b	ENSGT00940000160850	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Tongue sole	MODERN SPECIES	3	FAM13C (ENSCSEG00000002937)	ENSCSEG00000002940	slc16a9a (ENSCSEG00000002944)	ccdc6a (ENSCSEG00000002947)	ANK3 (ENSCSEG00000002957)	ubac2 (ENSCSEG00000002997)	dachc (ENSCSEG00000003001)	mzt1 (ENSCSEG00000003005)	bora (ENSCSEG00000003012)	DIS3 (ENSCSEG00000003028)	pibf1 (ENSCSEG00000003043)	KLF5 (ENSCSEG00000003054)	pgbd5 (ENSCSEG00000003059)	ENSCSEG00000003065	akt3a (ENSCSEG00000003069) #21	zbtb18 (ENSCSEG00000003083) #22	adss2 (ENSCSEG00000003092) #25	slc29a1a (ENSCSEG00000003107)	atl2 (ENSCSEG00000003124)	olig3 (ENSCSEG00000003154)	ENSCSEG00000003161	il22ra2 (ENSCSEG00000003171)	MAP3K21 (ENSCSEG00000003176)	ENSCSEG00000003181	rgs17 (ENSCSEG00000003210)	oprm1 (ENSCSEG00000003211)	sf3b5 (ENSCSEG00000003216)	ENSCSEG00000003219	ENSCSEG00000003222	ENSCSEG00000003229	plekha1a (ENSCSEG00000003248)
Turbot	MODERN SPECIES	6	ENSSMAG00000016845	LRPPRC (ENSSMAG00000016811)	abcg8 (ENSSMAG00000036206)	abcg5 (ENSSMAG00000034963)	DYNC2LI1 (ENSSMAG00000022473)	ENSSMAG00000036983	ENSSMAG00000031666	ENSSMAG00000023134 ##19	ENSSMAG00000016872	ENSSMAG00000016882	ENSSMAG00000016889	ENSSMAG00000037187	ENSSMAG00000031175	sdccag8 (ENSSMAG00000030302)	akt3a (ENSSMAG00000018047) #21	zbtb18 (ENSSMAG00000018041) #22	adss2 (ENSSMAG00000017989) #25	ENSSMAG00000029992	ENSSMAG00000017934	ENSSMAG00000017847	ENSSMAG00000017823	ENSSMAG00000017807	ENSSMAG00000030429	ENSSMAG00000017788	ENSSMAG00000017765	ENSSMAG00000017640	rgs17 (ENSSMAG00000017614)	ENSSMAG00000018834	oprm1 (ENSSMAG00000018843)	sf3b5 (ENSSMAG00000018852)	ENSSMAG00000018856
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162287.A.i.a	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Zig-zag eel	MODERN SPECIES	6	ENSMAMG00000021858	LRPPRC (ENSMAMG00000021835)	abcg8 (ENSMAMG00000021826)	abcg5 (ENSMAMG00000021821)	DYNC2LI1 (ENSMAMG00000021792)	ENSMAMG00000027915	ENSMAMG00000021815	ENSMAMG00000021776 ##19	ENSMAMG00000021767	ENSMAMG00000021766	ENSMAMG00000028012	ENSMAMG00000021758	ENSMAMG00000021756	sdccag8 (ENSMAMG00000021747)	akt3a (ENSMAMG00000021727) #21	zbtb18 (ENSMAMG00000021720) #22	adss2 (ENSMAMG00000021710) #25	ENSMAMG00000021705	ENSMAMG00000021698	ENSMAMG00000021688	ENSMAMG00000021680	ENSMAMG00000024918	ENSMAMG00000026184	il22ra2 (ENSMAMG00000021671)	ENSMAMG00000021666	ENSMAMG00000024346	rgs17 (ENSMAMG00000021647)	oprm1 (ENSMAMG00000021646)	sf3b5 (ENSMAMG00000021639)	ENSMAMG00000021630	ENSMAMG00000021624
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162287.A.i.a	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Climbing perch	MODERN SPECIES	6	abcg8 (ENSATEG00000010500)	abcg5 (ENSATEG00000010460)	DYNC2LI1 (ENSATEG00000010448)	ENSATEG00000010407	ENSATEG00000010438	ENSATEG00000027746 ##19	ENSATEG00000010341 ##19	ENSATEG00000021262 ##19	ENSATEG00000010330	ENSATEG00000010316	ENSATEG00000010298	ENSATEG00000010284	ENSATEG00000010276	sdccag8 (ENSATEG00000010258)	akt3a (ENSATEG00000010208) #21	zbtb18 (ENSATEG00000010192) #22	adss2 (ENSATEG00000010142) #25	ENSATEG00000010126	ENSATEG00000010108	ENSATEG00000010094	ENSATEG00000029954	ENSATEG00000010052	ENSATEG00000010029	il22ra2 (ENSATEG00000028689)	ENSATEG00000010013	ENSATEG00000009795	rgs17 (ENSATEG00000009757)	oprm1 (ENSATEG00000009728)	sf3b5 (ENSATEG00000009720)	ENSATEG00000009666	ENSATEG00000009594
Siamese fighting fish	MODERN SPECIES	6	znhit2 (ENSBSLG00000025194)	LRPPRC (ENSBSLG00000024832)	abcg8 (ENSBSLG00000024694)	abcg5 (ENSBSLG00000024674)	dync2li1 (ENSBSLG00000024591)	ENSBSLG00000024561	HINT1 (ENSBSLG00000024550)	ENSBSLG00000024522 ##19	rtkn2 (ENSBSLG00000024486)	ENSBSLG00000024473	TMEM26 (ENSBSLG00000024462)	perp (ENSBSLG00000024450)	TNFAIP3 (ENSBSLG00000024426)	sdccag8 (ENSBSLG00000024286)	akt3a (ENSBSLG00000023291) #21	zbtb18 (ENSBSLG00000023189) #22	adss2 (ENSBSLG00000022882) #25	slc29a1a (ENSBSLG00000022608)	atl2 (ENSBSLG00000022402)	olig3 (ENSBSLG00000022319)	ENSBSLG00000022077	il22ra2 (ENSBSLG00000022055)	MAP3K21 (ENSBSLG00000021998)	ENSBSLG00000021757	rgs17 (ENSBSLG00000021711)	oprm1 (ENSBSLG00000021508)	sf3b5 (ENSBSLG00000021502)	ENSBSLG00000021422	plekha1a (ENSBSLG00000021171)	htra1a (ENSBSLG00000020234)	WAPL (ENSBSLG00000020153)
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000170915	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000156772.b.c.b.b	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628
Tetraodontidae	ANCESTRAL SPECIES	7	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000170915	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000156772.b.c.b.b	ENSGT00940000160850	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Fugu	MODERN SPECIES	16	znhit2 (ENSTRUG00000021686)	LRPPRC (ENSTRUG00000008409)	abcg8 (ENSTRUG00000009126)	abcg5 (ENSTRUG00000009436)	dync2li1 (ENSTRUG00000009708)	lyrm7 (ENSTRUG00000021729)	hint1 (ENSTRUG00000009900)	ENSTRUG00000032684 ##19	rtkn2 (ENSTRUG00000010402)	ENSTRUG00000010671	TMEM26 (ENSTRUG00000010790)	perp (ENSTRUG00000010833)	TNFAIP3 (ENSTRUG00000010869)	sdccag8 (ENSTRUG00000002315)	akt3a (ENSTRUG00000000753) #21	zbtb18 (ENSTRUG00000020604) #22	adss2 (ENSTRUG00000001016) #25	ENSTRUG00000032717	slc29a1a (ENSTRUG00000001311)	atl2 (ENSTRUG00000001501)	ENSTRUG00000002670	ENSTRUG00000001737	ENSTRUG00000001999	olig3 (ENSTRUG00000003781)	ifngr1 (ENSTRUG00000019621)	il22ra2 (ENSTRUG00000032360)	MAP3K21 (ENSTRUG00000003898)	ENSTRUG00000027547	rgs17 (ENSTRUG00000005152)	oprm1 (ENSTRUG00000005296)	sf3b5 (ENSTRUG00000005577)
Tetraodon	MODERN SPECIES	9	ppm1ba (ENSTNIG00000007469)	lrpprc (ENSTNIG00000007470)	abcg8 (ENSTNIG00000007471)	abcg5 (ENSTNIG00000007472)	dync2li1 (ENSTNIG00000007473)	lyrm7 (ENSTNIG00000007474)	HINT1 (ENSTNIG00000007475)	ENSTNIG00000007476 ##19	rtkn2 (ENSTNIG00000007477)	ENSTNIG00000007478	ENSTNIG00000007479	perp (ENSTNIG00000007480)	TNFAIP3 (ENSTNIG00000007481)	sdccag8 (ENSTNIG00000007482)	akt3a (ENSTNIG00000002713) #21	zbtb18 (ENSTNIG00000000430) #22	adss2 (ENSTNIG00000016999) #25	ENSTNIG00000017000	slc29a1a (ENSTNIG00000017001)	atl2 (ENSTNIG00000017002)	ENSTNIG00000017003	olig3 (ENSTNIG00000017004)	il22ra2 (ENSTNIG00000017005)	MAP3K21 (ENSTNIG00000017006)	ENSTNIG00000017007	rgs17 (ENSTNIG00000017008)	oprm1 (ENSTNIG00000017009)	sf3b5 (ENSTNIG00000001265)	ENSTNIG00000017010	plekha1a (ENSTNIG00000017011)	htra1a (ENSTNIG00000017012)
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162287.A.i.a	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000156772.b.c.b.b	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162287.A.i.a	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000156772.b.c.b.b	ENSGT00940000160850	ENSGT01030000235197	ENSGT00940000158231.l	ENSGT00390000016499	ENSGT00940000177543	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d
Perciformes	ANCESTRAL SPECIES	17	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162287.A.i.a	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000156772.b.c.b.b	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628
Cottioidei	ANCESTRAL SPECIES	17	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000154451	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000161979.A.a.e.a	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000156772.b.c.b.b	ENSGT00940000160850	ENSGT01030000235197	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628
Lumpfish	MODERN SPECIES	6	abcg8 (ENSCLMG00005022517)	abcg5 (ENSCLMG00005022518)	dync2li1 (ENSCLMG00005022519)	lyrm7 (ENSCLMG00005022520)	HINT1 (ENSCLMG00005004337)	ENSCLMG00005004356 ##19	ENSCLMG00005004401 ##19	rtkn2 (ENSCLMG00005004420)	ENSCLMG00005004462	ENSCLMG00005004493	TMEM26 (ENSCLMG00005004713)	perp (ENSCLMG00005004723)	TNFAIP3 (ENSCLMG00005004744)	sdccag8 (ENSCLMG00005004802)	akt3a (ENSCLMG00005004865) #21	zbtb18 (ENSCLMG00005009280) #22	adss2 (ENSCLMG00005009286) #25	ENSCLMG00005009378	slc29a1a (ENSCLMG00005009381)	atl2 (ENSCLMG00005009447)	ENSCLMG00005014827	ENSCLMG00005014828	olig3 (ENSCLMG00005014830)	si:ch73-52p7.1 (ENSCLMG00005014831)	ENSCLMG00005014833	il22ra2 (ENSCLMG00005014834)	MAP3K21 (ENSCLMG00005014836)	ENSCLMG00005014843	rgs17 (ENSCLMG00005015100)	oprm1 (ENSCLMG00005015101)	sf3b5 (ENSCLMG00005015103)
Stickleback	MODERN SPECIES	6	znhit2 (ENSGACG00000010715)	lrpprc (ENSGACG00000010679)	abcg8 (ENSGACG00000010667)	abcg5 (ENSGACG00000010653)	dync2li1 (ENSGACG00000010638)	lyrm7 (ENSGACG00000010635)	HINT1 (ENSGACG00000010631)	ENSGACG00000010618 ##19	rtkn2 (ENSGACG00000010606)	ENSGACG00000010603	TMEM26 (ENSGACG00000010587)	perp (ENSGACG00000010566)	TNFAIP3 (ENSGACG00000010558)	sdccag8 (ENSGACG00000010549)	akt3a (ENSGACG00000010522) #21	zbtb18 (ENSGACG00000010518) #22	ENSGACG00000010516	adss2 (ENSGACG00000010492) #25	ENSGACG00000010491	slc29a1a (ENSGACG00000010439)	atl2 (ENSGACG00000010424)	ENSGACG00000010414	olig3 (ENSGACG00000010412)	ENSGACG00000010411	ENSGACG00000010407	il22ra2 (ENSGACG00000010404)	MAP3K21 (ENSGACG00000010392)	ENSGACG00000010377	rgs17 (ENSGACG00000010373)	oprm1 (ENSGACG00000010365)	sf3b5 (ENSGACG00000010363)
Perciformes_a	ANCESTRAL SPECIES	16	ENSGT00940000156070.a.a	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162287.A.i.a	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000156772.b.c.b.b	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a	ENSGT00940000156955.a.a
Pike perch	MODERN SPECIES	10	znhit2 (ENSSLUG00000017209)	LRPPRC (ENSSLUG00000014809)	abcg8 (ENSSLUG00000014466)	abcg5 (ENSSLUG00000014409)	dync2li1 (ENSSLUG00000014398)	lyrm7 (ENSSLUG00000014389)	hint1 (ENSSLUG00000014378)	ENSSLUG00000014358 ##19	rtkn2 (ENSSLUG00000014344)	ENSSLUG00000014333	TMEM26 (ENSSLUG00000014324)	perp (ENSSLUG00000014315)	TNFAIP3 (ENSSLUG00000014279)	sdccag8 (ENSSLUG00000014254)	akt3a (ENSSLUG00000012742) #21	zbtb18 (ENSSLUG00000012657) #22	ENSSLUG00000012651	adss2 (ENSSLUG00000012500) #25	ENSSLUG00000012481	slc29a1a (ENSSLUG00000012287)	atl2 (ENSSLUG00000008789)	ENSSLUG00000008645	il22ra2 (ENSSLUG00000008635)	MAP3K21 (ENSSLUG00000008623)	ENSSLUG00000008610	rgs17 (ENSSLUG00000008589)	oprm1 (ENSSLUG00000008582)	sf3b5 (ENSSLUG00000008580)	ENSSLUG00000008557	plekha1a (ENSSLUG00000008517)	htra1a (ENSSLUG00000008448)
Channel bull blenny	MODERN SPECIES	6	abcg8 (ENSCGOG00000022386)	abcg5 (ENSCGOG00000022378)	dync2li1 (ENSCGOG00000022355)	lyrm7 (ENSCGOG00000022351)	hint1 (ENSCGOG00000022350)	ENSCGOG00000022349 ##19	ENSCGOG00000022346 ##19	rtkn2 (ENSCGOG00000022343)	ENSCGOG00000022342	ENSCGOG00000022339	TMEM26 (ENSCGOG00000022337)	perp (ENSCGOG00000022332)	TNFAIP3 (ENSCGOG00000022324)	sdccag8 (ENSCGOG00000022316)	akt3a (ENSCGOG00000019946) #21	zbtb18 (ENSCGOG00000019877) #22	adss2 (ENSCGOG00000018900) #25	ENSCGOG00000018888	slc29a1a (ENSCGOG00000018601)	atl2 (ENSCGOG00000018272)	ENSCGOG00000018262	ENSCGOG00000018260	ENSCGOG00000018259	il22ra2 (ENSCGOG00000018257)	MAP3K21 (ENSCGOG00000018246)	ENSCGOG00000018068	rgs17 (ENSCGOG00000018065)	oprm1 (ENSCGOG00000018064)	sf3b5 (ENSCGOG00000018062)	plekha1a (ENSCGOG00000018057)	ENSCGOG00000018055
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00940000156070.a.a	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00950000182774.a	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000156772.b.c.b.b	ENSGT00940000160850	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000157628	ENSGT00940000155157.a
Gilthead seabream	MODERN SPECIES	6	abcg8 (ENSSAUG00010024424)	abcg5 (ENSSAUG00010024441)	dync2li1 (ENSSAUG00010024620)	lyrm7 (ENSSAUG00010024625)	hint1 (ENSSAUG00010024627)	ENSSAUG00010024630 ##19	ENSSAUG00010024633 ##19	ENSSAUG00010024638 ##19	rtkn2 (ENSSAUG00010024643)	ENSSAUG00010024656	ENSSAUG00010024664	PERP (ENSSAUG00010024668)	TNFAIP3 (ENSSAUG00010024674)	sdccag8 (ENSSAUG00010024678)	akt3a (ENSSAUG00010024689) #21	zbtb18 (ENSSAUG00010025168) #22	adss2 (ENSSAUG00010025189) #25	slc29a1a (ENSSAUG00010025453)	atl2 (ENSSAUG00010025484)	ENSSAUG00010026306	olig3 (ENSSAUG00010026307)	ENSSAUG00010026310	il22ra2 (ENSSAUG00010026311)	MAP3K21 (ENSSAUG00010026313)	ENSSAUG00010026319	rgs17 (ENSSAUG00010026417)	oprm1 (ENSSAUG00010026418)	sf3b5 (ENSSAUG00010026419)	ENSSAUG00010026420	plekha1a (ENSSAUG00010026426)	WAPL (ENSSAUG00010026445)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00940000156070.a.a	ENSGT00390000017147	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00390000017923	ENSGT00940000155103.a.a ##19	ENSGT00940000157470	ENSGT00940000163584.b.a.b.b	ENSGT00390000014794.b.l	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00950000182774.a	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155710.a	ENSGT00940000156772.b.c.b.b	ENSGT00940000160850	ENSGT00390000016499	ENSGT00940000177543	ENSGT00530000068118	ENSGT00940000165457.a.a	ENSGT00940000159629	ENSGT00940000157374	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00390000013215
Large yellow croaker	MODERN SPECIES	2	znhit2 (ENSLCRG00005007896)	LRPPRC (ENSLCRG00005006341)	abcg8 (ENSLCRG00005006104)	abcg5 (ENSLCRG00005005589)	dync2li1 (ENSLCRG00005005563)	lyrm7 (ENSLCRG00005005556)	hint1 (ENSLCRG00005005555)	ENSLCRG00005005536 ##19	rtkn2 (ENSLCRG00005005533)	ENSLCRG00005005529	TMEM26 (ENSLCRG00005005528)	perp (ENSLCRG00005005526)	TNFAIP3 (ENSLCRG00005005524)	sdccag8 (ENSLCRG00005005516)	akt3a (ENSLCRG00005004908) #21	zbtb18 (ENSLCRG00005004904) #22	adss2 (ENSLCRG00005004604) #25	slc29a1a (ENSLCRG00005004590)	atl2 (ENSLCRG00005003244)	ENSLCRG00005003212	ENSLCRG00005003211	olig3 (ENSLCRG00005003209)	ifngr1l (ENSLCRG00005003207)	il22ra2 (ENSLCRG00005003206)	MAP3K21 (ENSLCRG00005003202)	ENSLCRG00005003199	rgs17 (ENSLCRG00005003196)	oprm1 (ENSLCRG00005003193)	sf3b5 (ENSLCRG00005003191)	ENSLCRG00005003178	plekha1a (ENSLCRG00005003168)
European seabass	MODERN SPECIES	1	ppm1ba (ENSDLAG00005030148)	LRPPRC (ENSDLAG00005022995)	abcg5 (ENSDLAG00005022915)	ABCG8 (ENSDLAG00005022947)	ENSDLAG00005022898	ENSDLAG00005032923	ENSDLAG00005022884 ##19	ENSDLAG00005022871	ENSDLAG00005022867	ENSDLAG00005022858	ENSDLAG00005030371	ENSDLAG00005030588	ENSDLAG00005022847	sdccag8 (ENSDLAG00005022834)	akt3a (ENSDLAG00005022766) #21	zbtb18 (ENSDLAG00005022756) #22	adss2 (ENSDLAG00005022586) #25	ENSDLAG00005022568	ENSDLAG00005020915	ENSDLAG00005022539	ENSDLAG00005020859	ENSDLAG00005020857	ENSDLAG00005020852	il22ra2 (ENSDLAG00005020836)	ENSDLAG00005020813	ENSDLAG00005020572	rgs17 (ENSDLAG00005020545)	oprm1 (ENSDLAG00005020527)	sf3b5 (ENSDLAG00005033390)	ENSDLAG00005020507	ENSDLAG00005020471
Ballan wrasse	MODERN SPECIES	1056																zbtb18 (ENSLBEG00000014796) #22
Cod	MODERN SPECIES	6	ENSGMOG00000028188	ENSGMOG00000034181	ENSGMOG00000034684	ENSGMOG00000036784	ENSGMOG00000014017	MDH1 (ENSGMOG00000013993)	WDPCP (ENSGMOG00000013821)	otx1 (ENSGMOG00000036614)	EHBP1 (ENSGMOG00000024335)	b3gnt2b (ENSGMOG00000020567)	ENSGMOG00000033992	ENSGMOG00000033248	ENSGMOG00000011835	ENSGMOG00000018755	akt3a (ENSGMOG00000018728) #21	zbtb18 (ENSGMOG00000022213) #22	ENSGMOG00000033295	ENSGMOG00000018736	adss2 (ENSGMOG00000016228) #25	ENSGMOG00000026709	ENSGMOG00000018483	ENSGMOG00000018475	ENSGMOG00000026043	ENSGMOG00000018465	il22ra2 (ENSGMOG00000033343)	ENSGMOG00000029108	ENSGMOG00000018422	ENSGMOG00000018372	rgs17 (ENSGMOG00000018362)	oprm1 (ENSGMOG00000009741)	ENSGMOG00000035050
Otomorpha	ANCESTRAL SPECIES	32	ENSGT00940000155970	ENSGT00510000047850	ENSGT00940000158292.a.b	ENSGT00940000160346.B.f	ENSGT00390000002168	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00940000155103.a.a ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00940000164014.a.a	ENSGT00940000164014.a.b	ENSGT00940000161285.a	ENSGT00940000168267	ENSGT00530000064150	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000160850	ENSGT01030000235197	ENSGT00940000165457.a.a.a	ENSGT00990000204028.e	ENSGT00940000161124
Clupeiformes	ANCESTRAL SPECIES	35	ENSGT00940000155930.g.a	ENSGT00510000047850	ENSGT00940000158292.a.b	ENSGT00940000160346.B.f	ENSGT00390000002168	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00940000155103.a.a ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00940000164014.a.b.p	ENSGT00940000164014.a.b.o	ENSGT00940000161285.a	ENSGT00940000168267	ENSGT00530000064150	ENSGT00530000063484.a	ENSGT00940000158448	ENSGT00940000160850	ENSGT00990000204028.e	ENSGT00940000161124	ENSGT00940000165457.a.a.b	ENSGT00940000159629	ENSGT00940000157374
Denticle herring	MODERN SPECIES	18	telo2 (ENSDCDG00000004118)	rab11fip3 (ENSDCDG00000004094)	decr2 (ENSDCDG00000004080)	ENSDCDG00000004064	ENSDCDG00000004059	ENSDCDG00000004058	ENSDCDG00000004056	ENSDCDG00000004054	ARFGEF3 (ENSDCDG00000004040)	EML4 (ENSDCDG00000003993)	ENSDCDG00000003974	ENSDCDG00000003971	ENSDCDG00000003962 ##19	sdccag8 (ENSDCDG00000003950)	akt3a (ENSDCDG00000003879) #21	zbtb18 (ENSDCDG00000003870) #22	adss2 (ENSDCDG00000003786) #25	desi2 (ENSDCDG00000003770) #27	ENSDCDG00000003768	lhb (ENSDCDG00000003709)	cox20 (ENSDCDG00000003699)	ENSDCDG00000003697	QKI (ENSDCDG00000003694)	prkn (ENSDCDG00000003685)	ENSDCDG00000003679	prph2b (ENSDCDG00000003201)	pkdcca (ENSDCDG00000003190)	rpl32 (ENSDCDG00000003171)	ENSDCDG00000003143	ENSDCDG00000021587	ENSDCDG00000021586
Atlantic herring	MODERN SPECIES	4	ENSCHAG00000018672	ENSCHAG00000018697	six2a (ENSCHAG00000018739)	six3a (ENSCHAG00000018762)	ENSCHAG00000018777	prepl (ENSCHAG00000018791)	SLC3A1 (ENSCHAG00000018877)	ppm1ba (ENSCHAG00000019051)	LRPPRC (ENSCHAG00000019114)	abcg8 (ENSCHAG00000020552)	abcg5 (ENSCHAG00000021025)	dync2li1 (ENSCHAG00000021582)	ENSCHAG00000021685 ##19	sdccag8 (ENSCHAG00000021737)	akt3a (ENSCHAG00000021882) #21	zbtb18 (ENSCHAG00000022644) #22	adss2 (ENSCHAG00000022654) #25	desi2 (ENSCHAG00000022827) #27	ENSCHAG00000022831	ENSCHAG00000022844	slc16a9a (ENSCHAG00000022849)	ccdc6a (ENSCHAG00000022856)	ANK3 (ENSCHAG00000022990)	cdk1 (ENSCHAG00000024822)	ENSCHAG00000024832	ENSCHAG00000024846	ENSCHAG00000024852	ENSCHAG00000002359	ENSCHAG00000002762	ADD3 (ENSCHAG00000002808)	smndc1 (ENSCHAG00000002928)
Otophysi	ANCESTRAL SPECIES		ENSGT00940000155930.g.a	ENSGT00510000047850	ENSGT00940000158292.a.b	ENSGT00940000160346.B.f	ENSGT00390000002168	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00940000155103.a.a ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27
Cyprinoidei	ANCESTRAL SPECIES	5	ENSGT00510000047850.e	ENSGT00510000047850.f	ENSGT00940000158292.a.b	ENSGT00940000160346.B.f	ENSGT00390000002168	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00940000155103.a.a ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00940000162691 #26	ENSGT00730000111005 #27	ENSGT00940000164014.a.a	ENSGT00940000155378.c.a	ENSGT00950000182932.A.b.a.b	ENSGT00940000158926	ENSGT00390000001670	ENSGT00940000153169.A.b.b.e.a	ENSGT00940000165044	ENSGT00390000009747	ENSGT00940000157919.a.a	ENSGT00940000158796	ENSGT00390000007726.a.a	ENSGT00950000183137.a.k
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	62	ENSGT00940000155493.i	ENSGT00940000165086.b.g.b	ENSGT00510000047850.f.a	ENSGT00940000158292.a.b.b.a.a	ENSGT00940000160346.B.f.a	ENSGT00390000002168.a	ENSGT00530000063426.a.d	ENSGT00940000158103	ENSGT00940000156070.a.a.j	ENSGT00960000186682.g	ENSGT00940000159739.b	ENSGT00940000157985.b	ENSGT00940000155103.a.a.d ##19	ENSGT00940000164292.a.a	ENSGT00940000157060.d #21	ENSGT00940000155092.b.m #22	ENSGT00390000015553.a.a.b.e #25	ENSGT00940000162691 #26	ENSGT00730000111005.r.b #27	ENSGT00940000164014.a.a.f	ENSGT00940000155378.c.a.e	ENSGT00950000182932.A.b.a.b.gb.a	ENSGT00940000158926.n	ENSGT00390000001670.e	ENSGT00940000153169.A.b.b.e.a	ENSGT00940000165044.e	ENSGT00390000009747.f	ENSGT00940000157919.b.k.a	ENSGT00940000155737.b.l.b	ENSGT00940000158796.r	ENSGT00390000007726.a.a.e
Goldfish	MODERN SPECIES	31	dennd10 (ENSCARG00000023306)	sfxn4 (ENSCARG00000023240)	prdx3 (ENSCARG00000023198)	tm9sf3 (ENSCARG00000022629)	ENSCARG00000022582	SRBD1 (ENSCARG00000022306)	six2a (ENSCARG00000022266)	six3a (ENSCARG00000022254)	CAMKMT (ENSCARG00000022218)	SLC3A1 (ENSCARG00000022161)	ppm1ba (ENSCARG00000022139)	LRPPRC (ENSCARG00000016911)	ENSCARG00000016703 ##19	sdccag8 (ENSCARG00000016636)	akt3a (ENSCARG00000014112) #21	zbtb18 (ENSCARG00000013997) #22	adss2 (ENSCARG00000013162) #25	CATSPERE (ENSCARG00000013133) #26	desi2 (ENSCARG00000013123) #27	ENSCARG00000013118	DCTN1 (ENSCARG00000011119)	ENSCARG00000011031	ENSCARG00000011026	SLC39A8 (ENSCARG00000011018)	manba (ENSCARG00000010367)	ube2d3 (ENSCARG00000010170)	ENSCARG00000010158	sufu (ENSCARG00000009687)	trim8a (ENSCARG00000009668)	arl3a (ENSCARG00000009661)	arl3a (ENSCARG00000009659)
Cyprininae_a	ANCESTRAL SPECIES	32	ENSGT00940000155493.i	ENSGT00940000165086.b.g.b	ENSGT00510000047850.f.a	ENSGT00940000158292.a.b.b.a.a	ENSGT00940000160346.B.f.a	ENSGT00390000002168.a	ENSGT00530000063426.a.d	ENSGT00940000158103	ENSGT00940000156070.a.a.j	ENSGT00960000186682.g	ENSGT00940000159739.b	ENSGT00940000157985.b	ENSGT00940000155103.a.a.d ##19	ENSGT00940000164292.a.a	ENSGT00940000157060.d #21	ENSGT00940000155092.b.m #22	ENSGT00390000015553.a.a.b.e #25	ENSGT00940000162691 #26	ENSGT00730000111005.r.b #27	ENSGT00940000164014.a.a.f	ENSGT00940000155378.c.a.e	ENSGT00950000182932.A.b.a.b.gb.a	ENSGT00390000001670.e	ENSGT00940000153169.A.b.b.e.a.c	ENSGT00940000165044.e	ENSGT00390000009747.f	ENSGT00940000157919.b.k.a	ENSGT00940000155737.b.l.b	ENSGT00940000158796.r	ENSGT00390000007726.a.a.e	ENSGT00950000183137.a.k.b
Common carp reference	MODERN SPECIES	48	tm9sf3 (ENSCCRG00000051877)	ENSCCRG00000026483	SRBD1 (ENSCCRG00000080746)	six2a (ENSCCRG00000056976)	six3a (ENSCCRG00000074911)	CAMKMT (ENSCCRG00000081834)	prepl (ENSCCRG00000072705)	SLC3A1 (ENSCCRG00000074378)	ppm1ba (ENSCCRG00000007146)	LRPPRC (ENSCCRG00000042706)	abcg8 (ENSCCRG00000042677)	abcg5 (ENSCCRG00000022912)	ENSCCRG00000022865 ##19	sdccag8 (ENSCCRG00000042665)	akt3a (ENSCCRG00000039019) #21	zbtb18 (ENSCCRG00000068370) #22	adss2 (ENSCCRG00000032068) #25	CATSPERE (ENSCCRG00000047791) #26	desi2 (ENSCCRG00000062035) #27	ENSCCRG00000048249	ENSCCRG00000068213	ENSCCRG00000049393	ENSCCRG00000063134	manba (ENSCCRG00000020718)	ube2d3 (ENSCCRG00000058374)	ENSCCRG00000020655	sufu (ENSCCRG00000082001)	trim8a (ENSCCRG00000032256)	oga (ENSCCRG00000071785)	ENSCCRG00000049751	gng2 (ENSCCRG00000076079)
Golden-line barbel	MODERN SPECIES	95	hormad1 (ENSSGRG00000007656)	CTSS (ENSSGRG00000007659)	ctsk (ENSSGRG00000008398)	lingo4b (ENSSGRG00000008454)	si:ch211-113g11.6 (ENSSGRG00000008455)	tlr18 (ENSSGRG00000008456)	s100a1 (ENSSGRG00000008515)	mettl25b (ENSSGRG00000008516)	LRPPRC (ENSSGRG00000008545)	abcg8 (ENSSGRG00000010496)	abcg5 (ENSSGRG00000010777)	dync2li1 (ENSSGRG00000010874)	ENSSGRG00000010875 ##19	sdccag8 (ENSSGRG00000010946)	akt3a (ENSSGRG00000010991) #21	zbtb18 (ENSSGRG00000011536) #22	adss2 (ENSSGRG00000011539) #25	ENSSGRG00000011556	desi2 (ENSSGRG00000011557) #27	DCTN1 (ENSSGRG00000011577)	ENSSGRG00000014635	ENSSGRG00000014636
Cyprininae	ANCESTRAL SPECIES	347			ENSGT00510000047850.f.b	ENSGT00940000158292.a.b.a	ENSGT00940000160346.B.f.b	ENSGT00390000002168.b	ENSGT00530000063426.a.c.a	ENSGT00940000156070.a.a.i	ENSGT00960000186682.h	ENSGT00940000159739.a.a	ENSGT00940000157985.a	ENSGT00390000010498	ENSGT00940000155103.a.a.c ##19	ENSGT00940000164292.a.b	ENSGT00940000157060.c #21	ENSGT00940000155092.b.n #22	ENSGT00390000015553.a.a.b.f #25	ENSGT00730000111005.r.a #27	ENSGT00940000164014.a.a.e	ENSGT00940000155378.c.a.f	ENSGT00950000182932.A.b.a.b.gb.b	ENSGT00940000165044.f	ENSGT00390000009747.e	ENSGT00940000157919.b.k.b	ENSGT00940000155737.b.l.a.b	ENSGT00940000158796.q	ENSGT00390000007726.a.a.f	ENSGT00950000183137.a.k.a	ENSGT01100000263497.C.l	ENSGT00390000013159.b	ENSGT00910000144274.d
Goldfish	MODERN SPECIES	4	il22ra2 (ENSCARG00000017775)	ENSCARG00000017837	six2a (ENSCARG00000017861)	ENSCARG00000017870	six3a (ENSCARG00000017877)	CAMKMT (ENSCARG00000017889)	prepl (ENSCARG00000017911)	ppm1ba (ENSCARG00000017935)	ENSCARG00000017953	abcg8 (ENSCARG00000018032)	abcg5 (ENSCARG00000018311)	dync2li1 (ENSCARG00000018433)	ENSCARG00000018625 ##19	sdccag8 (ENSCARG00000018631)	akt3a (ENSCARG00000018677) #21	zbtb18 (ENSCARG00000018763) #22	adss2 (ENSCARG00000018814) #25	ENSCARG00000019862	desi2 (ENSCARG00000019878) #27	DCTN1 (ENSCARG00000020050)	ENSCARG00000028284	ube2d3 (ENSCARG00000028292)	ENSCARG00000028310	sufu (ENSCARG00000028345)	trim8a (ENSCARG00000028886)	arl3a (ENSCARG00000028902)	npm3 (ENSCARG00000028937)	oga (ENSCARG00000028995)	ENSCARG00000029177	gng2 (ENSCARG00000029190)	ENSCARG00000029222
Cyprininae_a	ANCESTRAL SPECIES	171	ENSGT00940000155493.j	ENSGT00940000165086.b.g.a	ENSGT00510000047850.f.b	ENSGT00940000158292.a.b.a	ENSGT00940000160346.B.f.b	ENSGT00390000002168.b	ENSGT00530000063426.a.c.a	ENSGT00940000156070.a.a.i	ENSGT00960000186682.h	ENSGT00940000159739.a.a	ENSGT00940000157985.a	ENSGT00390000010498	ENSGT00940000155103.a.a.c ##19	ENSGT00940000164292.a.b	ENSGT00940000157060.c #21	ENSGT00940000155092.b.n #22	ENSGT00390000015553.a.a.b.f #25	ENSGT00730000111005.r.a #27	ENSGT00940000164014.a.a.e	ENSGT00940000155378.c.a.f	ENSGT00950000182932.A.b.a.b.gb.b	ENSGT00940000158926.n	ENSGT00390000001670.f	ENSGT00940000153169.A.b.b.e.a.d	ENSGT00940000165044.f	ENSGT00390000009747.e	ENSGT00940000157919.b.k.b	ENSGT00940000155737.b.l.a.b	ENSGT00940000158796.q	ENSGT00390000007726.a.a.f	ENSGT00950000183137.a.k.a
Common carp reference	MODERN SPECIES	18	ENSCCRG00000056185	six2a (ENSCCRG00000049667)	six3a (ENSCCRG00000070032)	CAMKMT (ENSCCRG00000007152)	prepl (ENSCCRG00000032376)	ppm1ba (ENSCCRG00000032362)	LRPPRC (ENSCCRG00000079926)	abcg8 (ENSCCRG00000003358)	abcg5 (ENSCCRG00000003387)	dync2li1 (ENSCCRG00000004034)	ENSCCRG00000004047 ##19	ENSCCRG00000058832	ENSCCRG00000053399	akt3a (ENSCCRG00000078273) #21	adss2 (ENSCCRG00000061240) #25	zbtb18 (ENSCCRG00000056240) #22	desi2 (ENSCCRG00000068243) #27	ENSCCRG00000014483	ENSCCRG00000068609	ENSCCRG00000082451	ENSCCRG00000021220	ube2d3 (ENSCCRG00000065369)	ENSCCRG00000049403	sufu (ENSCCRG00000020643)	trim8a (ENSCCRG00000020637)	arl3a (ENSCCRG00000020630)	npm3 (ENSCCRG00000064842)	oga (ENSCCRG00000049768)	ENSCCRG00000069662	gng2 (ENSCCRG00000070028)	ENSCCRG00000054344
Golden-line barbel	MODERN SPECIES	67	six2a (ENSSGRG00000025278)	ENSSGRG00000025276	ENSSGRG00000025275	ENSSGRG00000025274	six3a (ENSSGRG00000025273)	CAMKMT (ENSSGRG00000025270)	ENSSGRG00000025268	ppm1ba (ENSSGRG00000025266)	LRPPRC (ENSSGRG00000024832)	abcg5 (ENSSGRG00000024827)	dync2li1 (ENSSGRG00000024718)	ENSSGRG00000024712 ##19	ENSSGRG00000024710 ##19	sdccag8 (ENSSGRG00000024709)	akt3a (ENSSGRG00000024708) #21	zbtb18 (ENSSGRG00000024707) #22	adss2 (ENSSGRG00000024557) #25	desi2 (ENSSGRG00000024556) #27	ENSSGRG00000024555	DCTN1 (ENSSGRG00000023487)	ENSSGRG00000023485	ENSSGRG00000023484	SLC39A8 (ENSSGRG00000023483)	manba (ENSSGRG00000023481)	ube2d3 (ENSSGRG00000022389)	ENSSGRG00000022298	ENSSGRG00000022294	ENSSGRG00000022293	trim8a (ENSSGRG00000022292)	arl3a (ENSSGRG00000022291)	npm3 (ENSSGRG00000022290)
Zebrafish	MODERN SPECIES	4	ENSDARG00000079827	six2a (ENSDARG00000058004)	six3a (ENSDARG00000058008)	CAMKMT (ENSDARG00000095224)	ENSDARG00000091900	prepl (ENSDARG00000017853)	SLC3A1 (ENSDARG00000017165)	ppm1ba (ENSDARG00000001888)	lrpprc (ENSDARG00000043970)	abcg8 (ENSDARG00000063059)	abcg5 (ENSDARG00000063078)	dync2li1 (ENSDARG00000039770)	ENSDARG00000006128 ##19	sdccag8 (ENSDARG00000078947)	akt3a (ENSDARG00000104810) #21	zbtb18 (ENSDARG00000028228) #22	adss2 (ENSDARG00000002071) #25	desi2 (ENSDARG00000004460) #27	ENSDARG00000088329	DCTN1 (ENSDARG00000056753)	ENSDARG00000106491	ENSDARG00000078991	SLC39A8 (ENSDARG00000056757)	manba (ENSDARG00000008238)	ube2d3 (ENSDARG00000038473)	ENSDARG00000056829	sufu (ENSDARG00000056801)	trim8a (ENSDARG00000090512)	arl3a (ENSDARG00000056794)	npm3 (ENSDARG00000103594)	oga (ENSDARG00000074686)
Characiphysae	ANCESTRAL SPECIES	92	ENSGT00940000155930.g.a	ENSGT00510000047850	ENSGT00940000158292.a.b	ENSGT00940000160346.B.f	ENSGT00390000002168	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00940000155103.a.a ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00940000164014.a.a	ENSGT00940000155378.c.a
Channel catfish	MODERN SPECIES	22	six2 (ENSIPUG00000009646)	six3 (ENSIPUG00000009635)	camkmt (ENSIPUG00000009592)	prepl (ENSIPUG00000009542)	slc3a1 (ENSIPUG00000009475)	ppm1b (ENSIPUG00000009451)	LRPPRC (ENSIPUG00000009406)	abcg8 (ENSIPUG00000009358)	ABCG5 (ENSIPUG00000009285)	dync2li1 (ENSIPUG00000009248)	ENSIPUG00000009151 ##19	ENSIPUG00000009131	SUCNR1 (ENSIPUG00000009100)	sdccag8 (ENSIPUG00000009043)	akt3 (ENSIPUG00000008940) #21	zbtb18 (ENSIPUG00000008912) #22	adss (ENSIPUG00000008865) #25	desi2 (ENSIPUG00000008825) #27	DCTN1 (ENSIPUG00000008635)	cmlo (ENSIPUG00000008596)	SLC39A8 (ENSIPUG00000008585)	manba (ENSIPUG00000008555)	ube2d3 (ENSIPUG00000008502)	ENSIPUG00000008482	SUFU (ENSIPUG00000008353)	trim8a (ENSIPUG00000008307)	arl3 (ENSIPUG00000008227)	npm3 (ENSIPUG00000008204)	mgea5 (ENSIPUG00000008044)	ENSIPUG00000007999	ENSIPUG00000007996
Characiphysae_b	ANCESTRAL SPECIES	91	ENSGT00940000155930.g.a	ENSGT00510000047850	ENSGT00940000158292.a.b	ENSGT00940000160346.B.f	ENSGT00390000002168	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00940000155103.a.a ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00940000164014.a.a	ENSGT00940000155378.c.a
Electric eel	MODERN SPECIES	171	ENSEEEG00000007339	six2a (ENSEEEG00000007340)	six3a (ENSEEEG00000007345)	CAMKMT (ENSEEEG00000007353)	prepl (ENSEEEG00000007357)	SLC3A1 (ENSEEEG00000007360)	ppm1ba (ENSEEEG00000007367)	LRPPRC (ENSEEEG00000007376)	abcg8 (ENSEEEG00000007615)	abcg5 (ENSEEEG00000007617)	dync2li1 (ENSEEEG00000007621)	ENSEEEG00000007624 ##19	ENSEEEG00000007626 ##19	sdccag8 (ENSEEEG00000007628)	akt3a (ENSEEEG00000007631) #21	ENSEEEG00000007737 #22	adss2 (ENSEEEG00000007738) #25
Characoidei	ANCESTRAL SPECIES	85	ENSGT00940000155930.g.a	ENSGT00510000047850	ENSGT00940000158292.a.b	ENSGT00940000160346.B.f	ENSGT00390000002168	ENSGT00530000063426.a	ENSGT00940000158103	ENSGT00940000156070.a.a	ENSGT00960000186682	ENSGT00940000159739	ENSGT00940000157985	ENSGT00390000010498	ENSGT00940000155103.a.a ##19	ENSGT00940000164292	ENSGT00940000157060 #21	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #25	ENSGT00730000111005 #27	ENSGT00940000164014.a.a	ENSGT00940000155378.c.a
Mexicana tetra	MODERN SPECIES	17	ENSAMXG00000039583	prepl (ENSAMXG00000004270)	SLC3A1 (ENSAMXG00000033380)	ppm1ba (ENSAMXG00000004254)	ENSAMXG00000034268	ENSAMXG00000004245	abcg8 (ENSAMXG00000004239)	abcg5 (ENSAMXG00000004205)	dync2li1 (ENSAMXG00000003123)	ENSAMXG00000030689	ENSAMXG00000041810	ENSAMXG00000003074 ##19	sdccag8 (ENSAMXG00000003052)	ENSAMXG00000043632	akt3a (ENSAMXG00000003004) #21	zbtb18 (ENSAMXG00000042119) #22	adss2 (ENSAMXG00000002991) #25	desi2 (ENSAMXG00000029271) #27	gfra4a (ENSAMXG00000008284)	ATRN (ENSAMXG00000012199)	EIF2AK3 (ENSAMXG00000002628)	rpia (ENSAMXG00000030591)	slc4a11 (ENSAMXG00000012299)	ENSAMXG00000012313	dnaaf9 (ENSAMXG00000012330)	cfd (ENSAMXG00000038575)	foxi2 (ENSAMXG00000039729)	ENSAMXG00000037452	fgfr3 (ENSAMXG00000012387)	letm1 (ENSAMXG00000012451)	nsd2 (ENSAMXG00000012476)
Red-bellied piranha	MODERN SPECIES	15	SRBD1 (ENSPNAG00000013492)	six2a (ENSPNAG00000002782)	six3a (ENSPNAG00000013510)	CAMKMT (ENSPNAG00000002804)	SLC3A1 (ENSPNAG00000013555)	prepl (ENSPNAG00000002856)	ppm1ba (ENSPNAG00000013678)	LRPPRC (ENSPNAG00000002895)	abcg8 (ENSPNAG00000002918)	abcg5 (ENSPNAG00000013764)	dync2li1 (ENSPNAG00000007035)	ENSPNAG00000002973 ##19	sdccag8 (ENSPNAG00000013875)	akt3a (ENSPNAG00000013934) #21	adss2 (ENSPNAG00000014015) #25	zbtb18 (ENSPNAG00000014066) #22	desi2 (ENSPNAG00000014108) #27	ENSPNAG00000014129	DCTN1 (ENSPNAG00000014417)	ENSPNAG00000014462	ENSPNAG00000014463	ENSPNAG00000014474	ENSPNAG00000003137	ENSPNAG00000014498	manba (ENSPNAG00000014611)	ube2d3 (ENSPNAG00000014633)	ENSPNAG00000014644	sufu (ENSPNAG00000014704)	trim8a (ENSPNAG00000003228)	arl3a (ENSPNAG00000014755)	npm3 (ENSPNAG00000014779)