Mus	ANCESTRAL SPECIES	5	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b #8	ENSGT00940000156661 #9	ENSGT00950000183122.A #10	ENSGT00390000000747 #11	ENSGT01100000263502.A.a.b #12	ENSGT00950000182994.A.n.b #13	ENSGT00940000160037 #14	ENSGT00510000047676 #15	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #17	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691	ENSGT00730000111005 #26	ENSGT00390000016158 #27	ENSGT00940000156546.c #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #34	ENSGT00390000005861 #35	ENSGT00390000004799 #36	ENSGT00940000163104 #37	ENSGT00390000018900	ENSGT01030000234517.H.b
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000161899	ENSGT00940000154209.a.b #8	ENSGT00940000156661 #9	ENSGT00950000183122.A #10	ENSGT00390000000747 #11	ENSGT01100000263502.A.a.b #12	ENSGT00950000182994.A.n.b #13	ENSGT00940000160037 #14	ENSGT00510000047676 #15	ENSGT00390000008164.d #16	ENSGT00730000111185.n.b #18	ENSGT00950000183059.b.a.b #17	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691	ENSGT00730000111005 #26	ENSGT00390000016158 #27	ENSGT00940000156546.c #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #34	ENSGT00390000005861 #35	ENSGT00390000004799 #36	ENSGT00940000163104 #37	ENSGT00390000018900	ENSGT00860000135936
Ryukyu mouse	MODERN SPECIES		MGP_CAROLIEiJ_G0014940 #7	Grem2 (MGP_CAROLIEiJ_G0014941) #8	Rgs7 (MGP_CAROLIEiJ_G0014942) #9	Fh1 (MGP_CAROLIEiJ_G0014943) #10	Kmo (MGP_CAROLIEiJ_G0014944) #11	Opn3 (MGP_CAROLIEiJ_G0014945) #12	Chml (MGP_CAROLIEiJ_G0014946) #13	Wdr64 (MGP_CAROLIEiJ_G0014947) #14	Exo1 (MGP_CAROLIEiJ_G0014948) #15	Becn2 (MGP_CAROLIEiJ_G0014949) #16	Pld5 (MGP_CAROLIEiJ_G0014950) #17	Rbm8a2 (MGP_CAROLIEiJ_G0014951) #18	Cep170 (MGP_CAROLIEiJ_G0014952) #19	Sdccag8 (MGP_CAROLIEiJ_G0014953) #20	Akt3 (MGP_CAROLIEiJ_G0014954) #21	Zbtb18 (MGP_CAROLIEiJ_G0014955) #22	1700016C15Rik (MGP_CAROLIEiJ_G0014956) #23	Adss (MGP_CAROLIEiJ_G0014957) #24	MGP_CAROLIEiJ_G0014958 #25	Desi2 (MGP_CAROLIEiJ_G0014959) #26	Cox20 (MGP_CAROLIEiJ_G0014960) #27	MGP_CAROLIEiJ_G0014961 #28	Hnrnpu (MGP_CAROLIEiJ_G0014962) #29	Efcab2 (MGP_CAROLIEiJ_G0014963) #30	Kif26b (MGP_CAROLIEiJ_G0014964) #31	Smyd3 (MGP_CAROLIEiJ_G0014965) #32	MGP_CAROLIEiJ_G0014966 #33	MGP_CAROLIEiJ_G0014967 #34	Cnst (MGP_CAROLIEiJ_G0014968) #35	Sccpdh (MGP_CAROLIEiJ_G0014969) #36	Kif28 (MGP_CAROLIEiJ_G0014970) #37
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000161899	ENSGT00940000154209.a.b #8	ENSGT00940000156661 #9	ENSGT00950000183122.A #10	ENSGT00390000000747 #11	ENSGT01100000263502.A.a.b #12	ENSGT00950000182994.A.n.b #13	ENSGT00940000160037 #14	ENSGT00510000047676 #15	ENSGT00390000008164.d #16	ENSGT00730000111185.n.b #18	ENSGT00950000183059.b.a.b #17	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691	ENSGT00730000111005 #26	ENSGT00390000016158 #27	ENSGT00940000156546.c #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #34	ENSGT00390000005861 #35	ENSGT00390000004799 #36	ENSGT00940000163104 #37	ENSGT00390000018900	ENSGT00860000135936
Mouse	MODERN SPECIES		Fmn2 (ENSMUSG00000028354)	Grem2 (ENSMUSG00000050069) #8	Rgs7 (ENSMUSG00000026527) #9	Fh1 (ENSMUSG00000026526) #10	Kmo (ENSMUSG00000039783) #11	Opn3 (ENSMUSG00000026525) #12	Chml (ENSMUSG00000078185) #13	Wdr64 (ENSMUSG00000026523) #14	Exo1 (ENSMUSG00000039748) #15	Becn2 (ENSMUSG00000104158) #16	Pld5 (ENSMUSG00000055214) #17	Rbm8a2 (ENSMUSG00000078184) #18	Cep170 (ENSMUSG00000057335) #19	Sdccag8 (ENSMUSG00000026504) #20	Akt3 (ENSMUSG00000019699) #21	Zbtb18 (ENSMUSG00000063659) #22	1700016C15Rik (ENSMUSG00000015962) #23	Adss (ENSMUSG00000015961) #24	Catspere1 (ENSMUSG00000102483)	Catspere2 (ENSMUSG00000091476)	Desi2 (ENSMUSG00000026502) #26	Cox20 (ENSMUSG00000026500) #27	Hnrnpu (ENSMUSG00000039630) #29	Efcab2 (ENSMUSG00000026495) #30	Kif26b (ENSMUSG00000026494) #31	Smyd3 (ENSMUSG00000055067) #32	Tfb2m (ENSMUSG00000026492) #34	Cnst (ENSMUSG00000038949) #35	Sccpdh (ENSMUSG00000038936) #36	Kif28 (ENSMUSG00000087236) #37	Ahctf1 (ENSMUSG00000026491)
Mus_C	ANCESTRAL SPECIES	1	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b #8	ENSGT00940000156661 #9	ENSGT00950000183122.A #10	ENSGT00390000000747 #11	ENSGT01100000263502.A.a.b #12	ENSGT00950000182994.A.n.b #13	ENSGT00940000160037 #14	ENSGT00510000047676 #15	ENSGT00390000008164.d #16	ENSGT00950000183059.b.a.b #17	ENSGT00940000155103.a.b #19	ENSGT00730000111198 #20	ENSGT00940000157060.t #21	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00730000111005 #26	ENSGT00390000016158 #27	ENSGT00940000156546.c #29	ENSGT00940000160590 #30	ENSGT00940000156992 #31	ENSGT00940000156766 #32	ENSGT00950000183142.a.b.a.b #34	ENSGT00390000005861 #35	ENSGT00390000004799 #36	ENSGT00940000163104 #37	ENSGT00390000018900	ENSGT00860000135936	ENSGT01030000234517.H.b
Steppe mouse	MODERN SPECIES	2903												Cep170 (ENSMSIG00000007906) #19	Sdccag8 (ENSMSIG00000008255) #20	ENSMSIG00000008464	Akt3 (ENSMSIG00000008489) #21	Zbtb18 (ENSMSIG00000008641) #22	1700016C15Rik (ENSMSIG00000008684) #23	Adss (ENSMSIG00000008712) #24
spretus	MODERN SPECIES		Fmn2 (MGP_SPRETEiJ_G0015740)	Grem2 (MGP_SPRETEiJ_G0015741) #8	Rgs7 (MGP_SPRETEiJ_G0015742) #9	Fh1 (MGP_SPRETEiJ_G0015743) #10	Kmo (MGP_SPRETEiJ_G0015744) #11	Opn3 (MGP_SPRETEiJ_G0015745) #12	Chml (MGP_SPRETEiJ_G0015746) #13	Wdr64 (MGP_SPRETEiJ_G0015747) #14	Exo1 (MGP_SPRETEiJ_G0015748) #15	Becn2 (MGP_SPRETEiJ_G0015749) #16	Pld5 (MGP_SPRETEiJ_G0015750) #17	MGP_SPRETEiJ_G0015751 ##18	Cep170 (MGP_SPRETEiJ_G0015752) #19	Sdccag8 (MGP_SPRETEiJ_G0015753) #20	Akt3 (MGP_SPRETEiJ_G0015754) #21	Zbtb18 (MGP_SPRETEiJ_G0015755) #22	1700016C15Rik (MGP_SPRETEiJ_G0015756) #23	Adss (MGP_SPRETEiJ_G0015757) #24	Desi2 (MGP_SPRETEiJ_G0015758) #26	Cox20 (MGP_SPRETEiJ_G0015759) #27	MGP_SPRETEiJ_G0015760 #28	Hnrnpu (MGP_SPRETEiJ_G0015761) #29	Efcab2 (MGP_SPRETEiJ_G0015762) #30	Kif26b (MGP_SPRETEiJ_G0015763) #31	Smyd3 (MGP_SPRETEiJ_G0015764) #32	MGP_SPRETEiJ_G0015765 #34	MGP_SPRETEiJ_G0015766 #34	Cnst (MGP_SPRETEiJ_G0015767) #35	Sccpdh (MGP_SPRETEiJ_G0015768) #36	Kif28 (MGP_SPRETEiJ_G0015769) #37	Ahctf1 (MGP_SPRETEiJ_G0015770)
Shrew mouse	MODERN SPECIES	18	Or6y1 (MGP_PahariEiJ_G0028172)	MGP_PahariEiJ_G0028173	Grem2 (MGP_PahariEiJ_G0028174) #8	Rgs7 (MGP_PahariEiJ_G0028175) #9	Fh1 (MGP_PahariEiJ_G0028176) #10	Kmo (MGP_PahariEiJ_G0028177) #11	Opn3 (MGP_PahariEiJ_G0028178) #12	Chml (MGP_PahariEiJ_G0028179) #13	Wdr64 (MGP_PahariEiJ_G0028180) #14	Exo1 (MGP_PahariEiJ_G0028181) #15	Becn2 (MGP_PahariEiJ_G0028182) #16	Pld5 (MGP_PahariEiJ_G0028183) #17	Cep170 (MGP_PahariEiJ_G0028184) #19	Sdccag8 (MGP_PahariEiJ_G0028185) #20	Akt3 (MGP_PahariEiJ_G0028186) #21	Zbtb18 (MGP_PahariEiJ_G0028187) #22	1700016C15Rik (MGP_PahariEiJ_G0028188) #23	Adss (MGP_PahariEiJ_G0028189) #24	MGP_PahariEiJ_G0028190 #26	Cox20 (MGP_PahariEiJ_G0028191) #27	MGP_PahariEiJ_G0028192 #28	Hnrnpu (MGP_PahariEiJ_G0028193) #29	Efcab2 (MGP_PahariEiJ_G0028194) #30	Kif26b (MGP_PahariEiJ_G0028195) #31	Smyd3 (MGP_PahariEiJ_G0028196) #32	MGP_PahariEiJ_G0028197 #34	MGP_PahariEiJ_G0028198 #34	Cnst (MGP_PahariEiJ_G0028199) #35	Sccpdh (MGP_PahariEiJ_G0028200) #36	Kif28 (MGP_PahariEiJ_G0028201) #37	MGP_PahariEiJ_G0028202