Amniota	ANCESTRAL SPECIES	1	ENSGT01030000235112	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Mammalia	ANCESTRAL SPECIES	2	ENSGT01030000235112	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Theria	ANCESTRAL SPECIES	12	ENSGT01030000235112	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Eutheria	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00660000097201	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Primates	ANCESTRAL SPECIES	7	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Haplorrhini	ANCESTRAL SPECIES	41	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36
Simiiformes	ANCESTRAL SPECIES	31	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00910000147185	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36
Catarrhini	ANCESTRAL SPECIES	27	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00910000147185	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00940000161436.b #13	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36	ENSGT00940000154251.A.b.a.a
Cercopithecidae	ANCESTRAL SPECIES	33	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00910000147185	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00940000161436.b #13	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b.o #32	ENSGT00390000005861 #34	ENSGT00510000047669.j	ENSGT00390000004799 #35	ENSGT00390000018900 #36
Cercopithecinae	ANCESTRAL SPECIES	18	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00910000147185	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00940000161436.b #13	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b.o #32	ENSGT00390000005861 #34	ENSGT00510000047669.j	ENSGT00390000004799 #35	ENSGT00390000018900 #36
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000156661	ENSGT01100000264485	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00910000147185	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00940000161436.b #13	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00910000148055	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00910000147430	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b.o #32	ENSGT00390000005861 #34	ENSGT00510000047669.j
Macaca	DUPLICATION
Macaca	ANCESTRAL SPECIES		ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00910000147185	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852.o #12	ENSGT00940000161436.b #13	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b.c ##22	ENSGT00910000148055	ENSGT00940000155092.b.d #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158.v #28	ENSGT00910000147430	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b.o #32	ENSGT00390000005861 #34	ENSGT00510000047669.j	ENSGT00390000004799 #35	ENSGT00390000018900 #36
Macaca_a	ANCESTRAL SPECIES		ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852.o #12	ENSGT00940000161436.b #13	ENSGT00950000183059.b.a.b #14	ENSGT01100000263539.a.a.b.a.a.a.a.b.b #15	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b.b.a.a.a.a.b.a.a #19	ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.a.b.b.a.a #21	ENSGT00940000155092.b.d #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b.o #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36	ENSGT00940000153165.a.b.a #37	ENSGT00940000164696
Crab-eating macaque	MODERN SPECIES		KMO (ENSMFAG00000044420) #7	OPN3 (ENSMFAG00000042077) #8	WDR64 (ENSMFAG00000032673) #9	EXO1 (ENSMFAG00000023098) #10	BECN2 (ENSMFAG00000060731) #11	ENSMFAG00000039495 #12	ENSMFAG00000055286 #13	PLD5 (ENSMFAG00000038798) #14	ENSMFAG00000064196 #15	CEP170 (ENSMFAG00000002285) #16	SDCCAG8 (ENSMFAG00000045247) #17	AKT3 (ENSMFAG00000033261) #18	ENSMFAG00000063443 #19	ENSMFAG00000047436 #20	ENSMFAG00000063696 #21	ZBTB18 (ENSMFAG00000065061) #22	C1orf100 (ENSMFAG00000037345) #23	ADSS2 (ENSMFAG00000032956) #24	CATSPERE (ENSMFAG00000033487) #25	ENSMFAG00000057921 #26	DESI2 (ENSMFAG00000032549) #27	COX20 (ENSMFAG00000039162) #28	HNRNPU (ENSMFAG00000037308) #29	EFCAB2 (ENSMFAG00000039610) #30	SMYD3 (ENSMFAG00000045761) #31	TFB2M (ENSMFAG00000000959) #32	ENSMFAG00000051929 #33	CNST (ENSMFAG00000000416) #34	SCCPDH (ENSMFAG00000044986) #35	AHCTF1 (ENSMFAG00000045763) #36	ENSMFAG00000003501 #37
Rhesus	MODERN SPECIES		FH (ENSMMUG00000005667)	KMO (ENSMMUG00000005668) #7	OPN3 (ENSMMUG00000005669) #8	WDR64 (ENSMMUG00000008763) #9	EXO1 (ENSMMUG00000008761) #10	BECN2 (ENSMMUG00000060345) #11	ENSMMUG00000053723 #12	PLD5 (ENSMMUG00000004265) #14	ENSMMUG00000062759	ENSMMUG00000059561 #15	CEP170 (ENSMMUG00000019914) #16	SDCCAG8 (ENSMMUG00000019994) #17	AKT3 (ENSMMUG00000019995) #18	ENSMMUG00000049847 #19	ENSMMUG00000063991 #21	ZBTB18 (ENSMMUG00000015664) #22	C1H1orf100 (ENSMMUG00000000015) #23	ADSS2 (ENSMMUG00000000016) #24	ENSMMUG00000062093	CATSPERE (ENSMMUG00000000021) #25	DESI2 (ENSMMUG00000022310) #27	ENSMMUG00000062648	COX20 (ENSMMUG00000031175) #28	HNRNPU (ENSMMUG00000021098) #29	ENSMMUG00000053368	EFCAB2 (ENSMMUG00000011424) #30	KIF26B (ENSMMUG00000017324)	SMYD3 (ENSMMUG00000005777) #31	TFB2M (ENSMMUG00000055490) #32	ENSMMUG00000059690 #33	CNST (ENSMMUG00000011380) #34
Macaca	ANCESTRAL SPECIES		ENSGT00940000156661	ENSGT01100000264485	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00910000147185	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852.o #12	ENSGT00940000161436.b #13	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b.c ##22	ENSGT00910000148055	ENSGT00940000155092.b.d #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158.v #28	ENSGT00910000147430	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b.o #32	ENSGT00390000005861 #34	ENSGT00510000047669.j
Pig-tailed macaque	MODERN SPECIES	530	ENSMNEG00000020233	ENSMNEG00000028783	GREM2 (ENSMNEG00000004273)	RGS7 (ENSMNEG00000036900)	ENSMNEG00000043907	FH (ENSMNEG00000031503)	KMO (ENSMNEG00000043449) #7	OPN3 (ENSMNEG00000039263) #8	ENSMNEG00000027552	WDR64 (ENSMNEG00000043406) #9	EXO1 (ENSMNEG00000032416) #10	PLD5 (ENSMNEG00000041098) #14	CEP170 (ENSMNEG00000016347) #16	SDCCAG8 (ENSMNEG00000029839) #17	AKT3 (ENSMNEG00000042335) #18	ZBTB18 (ENSMNEG00000024588) ##22	ENSMNEG00000016127	C1orf100 (ENSMNEG00000031871) #23	ADSS2 (ENSMNEG00000035852) #24	CATSPERE (ENSMNEG00000026147) #25	DESI2 (ENSMNEG00000033512) #27	COX20 (ENSMNEG00000016736) #28	ENSMNEG00000039700	HNRNPU (ENSMNEG00000043645) #29	ENSMNEG00000027013	ENSMNEG00000033617 #30	KIF26B (ENSMNEG00000043221)	SMYD3 (ENSMNEG00000034852) #31	ENSMNEG00000040857	TFB2M (ENSMNEG00000034600) #32	CNST (ENSMNEG00000029053) #34
Macaca_a	ANCESTRAL SPECIES																	ENSGT00940000155092.b.c ##22
Crab-eating macaque	MODERN SPECIES	7	NSRP1 (ENSMFAG00000055182)	ENSMFAG00000061523	SLC6A4 (ENSMFAG00000002876)	BLMH (ENSMFAG00000001589)	TMIGD1 (ENSMFAG00000042486)	CPD (ENSMFAG00000042013)	GOSR1 (ENSMFAG00000038581)	ENSMFAG00000043507	ENSMFAG00000055017	ENSMFAG00000033846	ENSMFAG00000062468	ENSMFAG00000030053	ENSMFAG00000059147	ENSMFAG00000047278	ENSMFAG00000054369	ENSMFAG00000051027 ##22	ENSMFAG00000031748	ENSMFAG00000051168	ENSMFAG00000032719	ENSMFAG00000061903	NF1 (ENSMFAG00000033978)	OMG (ENSMFAG00000029409)	EVI2B (ENSMFAG00000053252)	EVI2A (ENSMFAG00000003552)	RAB11FIP4 (ENSMFAG00000036401)	ENSMFAG00000047784	ENSMFAG00000064943	ENSMFAG00000063616	COPRS (ENSMFAG00000030359)	UTP6 (ENSMFAG00000038842)	SUZ12 (ENSMFAG00000040091)
Cercopithecinae_b	ANCESTRAL SPECIES	3	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT01100000264485	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00910000148055	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00910000147430	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b.o #32	ENSGT00390000005861 #34	ENSGT00510000047669.j
Olive baboon	MODERN SPECIES		WDR64 (ENSPANG00000021032) #9	ENSPANG00000049821	EXO1 (ENSPANG00000005526) #10	ENSPANG00000037647 ##15	ENSPANG00000041812	ENSPANG00000049690	ENSPANG00000045430 ##15	MAP1LC3C (ENSPANG00000044045) #12	ENSPANG00000042045	PLD5 (ENSPANG00000005955) #14	CEP170 (ENSPANG00000022781) #16	SDCCAG8 (ENSPANG00000010168) #17	AKT3 (ENSPANG00000010019) #18	ENSPANG00000037188	ENSPANG00000044679	ZBTB18 (ENSPANG00000021934) #22	ENSPANG00000004992 #23	ADSS2 (ENSPANG00000006358) #24	CATSPERE (ENSPANG00000029860) #25	DESI2 (ENSPANG00000012978) #27	ENSPANG00000032745	COX20 (ENSPANG00000002384) #28	HNRNPU (ENSPANG00000011643) #29	EFCAB2 (ENSPANG00000026471) #30	ENSPANG00000049532	KIF26B (ENSPANG00000009793)	SMYD3 (ENSPANG00000005527) #31	ENSPANG00000050627	ENSPANG00000037010	TFB2M (ENSPANG00000050993) #32	ENSPANG00000025211
Cercopithecinae_d	ANCESTRAL SPECIES	68	ENSGT00940000153386.B.b	ENSGT00940000155196.r	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00910000148055	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158.v #28	ENSGT00910000147430	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b.o #32	ENSGT00390000005861 #34	ENSGT00510000047669.j	ENSGT00390000004799 #35
Sooty mangabey	MODERN SPECIES	449	ENSCATG00000042350	GREM2 (ENSCATG00000021508)	RGS7 (ENSCATG00000035083)	ENSCATG00000044040	FH (ENSCATG00000044877)	KMO (ENSCATG00000037464) #7	OPN3 (ENSCATG00000042188) #8	WDR64 (ENSCATG00000013569) #9	EXO1 (ENSCATG00000006511) #10	MAP1LC3C (ENSCATG00000031341) #12	PLD5 (ENSCATG00000021605) #14	CEP170 (ENSCATG00000031357) #16	SDCCAG8 (ENSCATG00000039425) #17	ENSCATG00000012672	AKT3 (ENSCATG00000033494) #18	ZBTB18 (ENSCATG00000040414) #22	ENSCATG00000003512	C1orf100 (ENSCATG00000043782) #23	ADSS2 (ENSCATG00000031646) #24	CATSPERE (ENSCATG00000040129) #25	DESI2 (ENSCATG00000039396) #27	COX20 (ENSCATG00000037050) #28	ENSCATG00000007496	HNRNPU (ENSCATG00000035273) #29	ENSCATG00000033734 #30	KIF26B (ENSCATG00000040207)	SMYD3 (ENSCATG00000041127) #31	ENSCATG00000039137 #31	TFB2M (ENSCATG00000041118) #32	CNST (ENSCATG00000045327) #34	ENSCATG00000020609
Drill	MODERN SPECIES	807												CEP170 (ENSMLEG00000029097) #16	SDCCAG8 (ENSMLEG00000008647) #17	ENSMLEG00000041086	AKT3 (ENSMLEG00000042542) #18	ZBTB18 (ENSMLEG00000023925) #22	ENSMLEG00000005578	C1orf100 (ENSMLEG00000027336) #23	ADSS2 (ENSMLEG00000036094) #24	CATSPERE (ENSMLEG00000035016) #25	DESI2 (ENSMLEG00000039449) #27	COX20 (ENSMLEG00000034231) #28	ENSMLEG00000015197	HNRNPU (ENSMLEG00000040141) #29	EFCAB2 (ENSMLEG00000032092) #30	KIF26B (ENSMLEG00000033132)
Vervet Monkey	MODERN SPECIES	17	FMN2 (ENSCSAG00000009553)	GREM2 (ENSCSAG00000019372)	RGS7 (ENSCSAG00000009524)	FH (ENSCSAG00000009513)	KMO (ENSCSAG00000009486) #7	OPN3 (ENSCSAG00000009434) #8	WDR64 (ENSCSAG00000009423) #9	EXO1 (ENSCSAG00000009399) #10	ENSCSAG00000009385 #12	BECN2 (ENSCSAG00000019373) #11	MAP1LC3C (ENSCSAG00000009372) #12	PLD5 (ENSCSAG00000009359) #14	CEP170 (ENSCSAG00000009345) #16	SDCCAG8 (ENSCSAG00000009336) #17	AKT3 (ENSCSAG00000009327) #18	ZBTB18 (ENSCSAG00000009318) #22	C1orf100 (ENSCSAG00000009313) #23	ADSS2 (ENSCSAG00000009306) #24	CATSPERE (ENSCSAG00000009285) #25	DESI2 (ENSCSAG00000009236) #27	COX20 (ENSCSAG00000009227) #28	HNRNPU (ENSCSAG00000009219) #29	EFCAB2 (ENSCSAG00000009206) #30	KIF26B (ENSCSAG00000009182)	TFB2M (ENSCSAG00000009135) #32	CNST (ENSCSAG00000009127) #34	SCCPDH (ENSCSAG00000009117) #35	AHCTF1 (ENSCSAG00000009102) #36	ZNF695 (ENSCSAG00000009076)	ENSCSAG00000009060	ENSCSAG00000009031
Rhinopithecus	ANCESTRAL SPECIES	63	ENSGT00940000153386.B.b	ENSGT00940000155196.r	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A.v	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31
Black snub-nosed monkey	MODERN SPECIES	319																ZBTB18 (ENSRBIG00000042576) #22	C1orf100 (ENSRBIG00000036507) #23	ADSS2 (ENSRBIG00000029921) #24	CATSPERE (ENSRBIG00000041705) #25	DESI2 (ENSRBIG00000032083) #27	ENSRBIG00000030032	COX20 (ENSRBIG00000032427) #28	HNRNPU (ENSRBIG00000031519) #29	EFCAB2 (ENSRBIG00000029218) #30	KIF26B (ENSRBIG00000037736)	SMYD3 (ENSRBIG00000045007) #31
Golden snub-nosed monkey	MODERN SPECIES	2836													CEP170 (ENSRROG00000038486) #16	SDCCAG8 (ENSRROG00000031685) #17	AKT3 (ENSRROG00000034576) #18	ZBTB18 (ENSRROG00000040861) #22	C1orf100 (ENSRROG00000043026) #23	ADSS2 (ENSRROG00000035892) #24	CATSPERE (ENSRROG00000028619) #25	DESI2 (ENSRROG00000036662) #27	COX20 (ENSRROG00000032327) #28	HNRNPU (ENSRROG00000041642) #29	EFCAB2 (ENSRROG00000022255) #30
Hominoidea	ANCESTRAL SPECIES	7	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00910000147185	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00940000161436.b #13	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00910000146860.b.a.a	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36	ENSGT00940000154251.A.b.a.a
Gibbon	MODERN SPECIES	20	ENSNLEG00000031828	RGS7 (ENSNLEG00000003630)	FH (ENSNLEG00000003677)	KMO (ENSNLEG00000003718) #7	ENSNLEG00000033151	OPN3 (ENSNLEG00000003760) #8	WDR64 (ENSNLEG00000003772) #9	EXO1 (ENSNLEG00000003806) #10	ENSNLEG00000035007	MAP1LC3C (ENSNLEG00000003820) #12	PLD5 (ENSNLEG00000003830) #14	ENSNLEG00000003866 #16	ENSNLEG00000034308	SDCCAG8 (ENSNLEG00000003873) #17	AKT3 (ENSNLEG00000003927) #18	ZBTB18 (ENSNLEG00000003981) #22	C1orf100 (ENSNLEG00000003983) #23	ADSS2 (ENSNLEG00000028310) #24	CATSPERE (ENSNLEG00000004005) #25	DESI2 (ENSNLEG00000004019) #27	ENSNLEG00000028968	ENSNLEG00000032561	COX20 (ENSNLEG00000004027) #28	ENSNLEG00000004046	ENSNLEG00000004108 #30	ENSNLEG00000004117	SMYD3 (ENSNLEG00000004133) #31	TFB2M (ENSNLEG00000004146) #32	CNST (ENSNLEG00000004157) #34	SCCPDH (ENSNLEG00000004170) #35	AHCTF1 (ENSNLEG00000004215) #36
Hominidae	ANCESTRAL SPECIES	6	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183000.c.a.a.i.a.a.b.a.b	ENSGT00940000161852 #12	ENSGT00940000161436.b #13	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00910000146860.b.a.a	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36	ENSGT00940000154251.A.b.a.a
Orangutan	MODERN SPECIES		ENSPPYG00000032558	GREM2 (ENSPPYG00000000073)	RGS7 (ENSPPYG00000000072)	FH (ENSPPYG00000000071)	KMO (ENSPPYG00000000070) #7	OPN3 (ENSPPYG00000000069) #8	WDR64 (ENSPPYG00000000068) #9	EXO1 (ENSPPYG00000000067) #10	BECN2 (ENSPPYG00000000066) #11	ENSPPYG00000037133	MAP1LC3C (ENSPPYG00000010665) #12	PLD5 (ENSPPYG00000000064) #14	CEP170 (ENSPPYG00000000063) #16	SDCCAG8 (ENSPPYG00000000061) #17	AKT3 (ENSPPYG00000000060) #18	ZBTB18 (ENSPPYG00000000059) #22	C1orf100 (ENSPPYG00000000058) #23	ADSS2 (ENSPPYG00000000057) #24	CATSPERE (ENSPPYG00000000056) #25	DESI2 (ENSPPYG00000000055) #27	ENSPPYG00000041762	COX20 (ENSPPYG00000037954) #28	HNRNPU (ENSPPYG00000000052) #29	EFCAB2 (ENSPPYG00000033790) #30	KIF26B (ENSPPYG00000000048)	SMYD3 (ENSPPYG00000000047) #31	TFB2M (ENSPPYG00000000046) #32	CNST (ENSPPYG00000000045) #34	ENSPPYG00000030496	SCCPDH (ENSPPYG00000000044) #35	AHCTF1 (ENSPPYG00000000042) #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	6	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183000.c.a.a.i.a.a.b.a.b	ENSGT00940000161852 #12	ENSGT00940000161436.b #13	ENSGT00950000183059.b.a.b.m #14	ENSGT00940000155103.a.b.o #16	ENSGT00910000146860.b.a.a	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900.e #36	ENSGT00940000154251.A.b.a.a
Gorilla	MODERN SPECIES		KMO (ENSGGOG00000013897) #7	ENSGGOG00000042072 #8	CHML (ENSGGOG00000016322)	WDR64 (ENSGGOG00000015532) #9	EXO1 (ENSGGOG00000013563) #10	BECN2 (ENSGGOG00000008172) #11	ENSGGOG00000043532	MAP1LC3C (ENSGGOG00000000253) #12	PLD5 (ENSGGOG00000011168) #14	ENSGGOG00000007912	ENSGGOG00000028488	ENSGGOG00000043649 #16	SDCCAG8 (ENSGGOG00000007709) #17	ENSGGOG00000022126	AKT3 (ENSGGOG00000007722) #18	ZBTB18 (ENSGGOG00000028442) #22	ADSS2 (ENSGGOG00000011109) #24	C1orf100 (ENSGGOG00000011106) #23	CATSPERE (ENSGGOG00000005744) #25	DESI2 (ENSGGOG00000009797) #27	ENSGGOG00000040495	COX20 (ENSGGOG00000028397) #28	HNRNPU (ENSGGOG00000004061) #29	ENSGGOG00000040325 #30	KIF26B (ENSGGOG00000010397)	ENSGGOG00000011667	SMYD3 (ENSGGOG00000034875) #31	TFB2M (ENSGGOG00000001095) #32	CNST (ENSGGOG00000007386) #34	SCCPDH (ENSGGOG00000002544) #35	AHCTF1 (ENSGGOG00000034836) #36
Homo/Pan group	ANCESTRAL SPECIES	7	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183000.c.a.a.i.a.a.b.a.b	ENSGT00940000161852 #12	ENSGT00940000161436.b #13	ENSGT00950000183059.b.a.b.m #14	ENSGT00940000155103.a.b.o #16	ENSGT00910000146860.b.a.a	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900.e #36	ENSGT00940000154251.A.b.a.a
Human	MODERN SPECIES		FMN2 (ENSG00000155816)	GREM2 (ENSG00000180875)	RGS7 (ENSG00000182901)	FH (ENSG00000091483)	KMO (ENSG00000117009) #7	OPN3 (ENSG00000054277) #8	CHML (ENSG00000203668)	WDR64 (ENSG00000162843) #9	EXO1 (ENSG00000174371) #10	BECN2 (ENSG00000196289) #11	MAP1LC3C (ENSG00000197769) #12	PLD5 (ENSG00000180287) #14	CEP170 (ENSG00000143702) #16	SDCCAG8 (ENSG00000054282) #17	AKT3 (ENSG00000117020) #18	ZBTB18 (ENSG00000179456) #22	C1orf100 (ENSG00000173728) #23	ADSS2 (ENSG00000035687) #24	CATSPERE (ENSG00000179397) #25	DESI2 (ENSG00000121644) #27	ENSG00000284188	COX20 (ENSG00000203667) #28	HNRNPU (ENSG00000153187) #29	EFCAB2 (ENSG00000203666) #30	KIF26B (ENSG00000162849)	SMYD3 (ENSG00000185420) #31	TFB2M (ENSG00000162851) #32	CNST (ENSG00000162852) #34	SCCPDH (ENSG00000143653) #35	AHCTF1 (ENSG00000153207) #36	ZNF695 (ENSG00000197472)
Pan	ANCESTRAL SPECIES		ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183000.c.a.a.i.a.a.b.a.b	ENSGT00940000161852 #12	ENSGT00940000161436.b #13	ENSGT00950000183059.b.a.b.m #14	ENSGT00940000155103.a.b.o #16	ENSGT00910000146860.b.a.a	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000005254.i.a.a.b.a	ENSGT00390000016158.v #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900.e #36	ENSGT00940000154251.A.b.a.a
Bonobo	MODERN SPECIES		RGS7 (ENSPPAG00000031922)	FH (ENSPPAG00000029968)	KMO (ENSPPAG00000030870) #7	OPN3 (ENSPPAG00000034935) #8	WDR64 (ENSPPAG00000015349) #9	EXO1 (ENSPPAG00000038555) #10	BECN2 (ENSPPAG00000016547) #11	ENSPPAG00000042191	MAP1LC3C (ENSPPAG00000026353) #12	ENSPPAG00000034254 #13	ENSPPAG00000031548 #14	CEP170 (ENSPPAG00000038692) #16	SDCCAG8 (ENSPPAG00000041964) #17	ENSPPAG00000041794	AKT3 (ENSPPAG00000035578) #18	ZBTB18 (ENSPPAG00000035489) #22	C1orf100 (ENSPPAG00000029380) #23	ADSS2 (ENSPPAG00000035584) #24	CATSPERE (ENSPPAG00000039497) #25	DESI2 (ENSPPAG00000036240) #27	ENSPPAG00000027622	COX20 (ENSPPAG00000033034) #28	HNRNPU (ENSPPAG00000038652) #29	ENSPPAG00000030892 #30	KIF26B (ENSPPAG00000036407)	SMYD3 (ENSPPAG00000037519) #31	TFB2M (ENSPPAG00000036577) #32	CNST (ENSPPAG00000041140) #34	SCCPDH (ENSPPAG00000041828) #35	AHCTF1 (ENSPPAG00000039155) #36	ZNF695 (ENSPPAG00000041917)
Chimpanzee	MODERN SPECIES		RGS7 (ENSPTRG00000002161)	FH (ENSPTRG00000002163)	KMO (ENSPTRG00000002164) #7	OPN3 (ENSPTRG00000002165) #8	WDR64 (ENSPTRG00000002166) #9	EXO1 (ENSPTRG00000002167) #10	BECN2 (ENSPTRG00000044975) #11	ENSPTRG00000050862	MAP1LC3C (ENSPTRG00000023346) #12	ENSPTRG00000047329 ##13	PLD5 (ENSPTRG00000002169) #14	CEP170 (ENSPTRG00000002172) #16	SDCCAG8 (ENSPTRG00000002173) #17	ENSPTRG00000049151	AKT3 (ENSPTRG00000002174) #18	ZBTB18 (ENSPTRG00000002175) #22	C1H1orf100 (ENSPTRG00000002177) #23	ADSS2 (ENSPTRG00000002178) #24	CATSPERE (ENSPTRG00000002179) #25	DESI2 (ENSPTRG00000002180) #27	ENSPTRG00000049372	COX20 (ENSPTRG00000038758) #28	HNRNPU (ENSPTRG00000002182) #29	EFCAB2 (ENSPTRG00000030083) #30	KIF26B (ENSPTRG00000002185)	ENSPTRG00000045241	SMYD3 (ENSPTRG00000002187) #31	TFB2M (ENSPTRG00000002188) #32	CNST (ENSPTRG00000002189) #34	SCCPDH (ENSPTRG00000002191) #35	AHCTF1 (ENSPTRG00000051402) #36
Platyrrhini	ANCESTRAL SPECIES	24	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A.x.a	ENSGT00390000000747 #7	ENSGT00910000147185	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b.fb.a #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158.w.b #28	ENSGT00910000147125	ENSGT00390000016158.w.a #28	ENSGT00940000156546.l.a #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36
Cebidae	ANCESTRAL SPECIES	23	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A.x.a	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b.fb.a #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158.w.b #28	ENSGT00910000147125	ENSGT00390000016158.w.a #28	ENSGT00940000156546.l.a #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36
Cebidae_a	ANCESTRAL SPECIES	11	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A.x.a	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b.fb.a #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.w.a #28	ENSGT00940000156546.l.a #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36	ENSGT00940000163997
Bolivian squirrel monkey	MODERN SPECIES	114	ENSSBOG00000028772	ENSSBOG00000030391	GREM2 (ENSSBOG00000018825)	ENSSBOG00000028764	RGS7 (ENSSBOG00000005787)	ENSSBOG00000031759	KMO (ENSSBOG00000028370) #7	ENSSBOG00000031868 #8	WDR64 (ENSSBOG00000024836) #9	EXO1 (ENSSBOG00000023658) #10	MAP1LC3C (ENSSBOG00000032837) #12	PLD5 (ENSSBOG00000031034) #14	CEP170 (ENSSBOG00000026709) #16	SDCCAG8 (ENSSBOG00000017248) #17	AKT3 (ENSSBOG00000029542) #18	ZBTB18 (ENSSBOG00000023273) #22	C1orf100 (ENSSBOG00000025161) #23	ENSSBOG00000021320 #24	ENSSBOG00000019992	CATSPERE (ENSSBOG00000034772) #25	DESI2 (ENSSBOG00000021690) #27	COX20 (ENSSBOG00000029804) #28	HNRNPU (ENSSBOG00000026500) #29	EFCAB2 (ENSSBOG00000034755) #30	KIF26B (ENSSBOG00000034697)	SMYD3 (ENSSBOG00000026164) #31	ENSSBOG00000035160	TFB2M (ENSSBOG00000033950) #32	CNST (ENSSBOG00000028424) #34	SCCPDH (ENSSBOG00000021995) #35	AHCTF1 (ENSSBOG00000004404) #36
Capuchin	MODERN SPECIES	75	GREM2 (ENSCCAG00000020252)	MED11 (ENSCCAG00000021433)	ENSCCAG00000032322	RGS7 (ENSCCAG00000025701)	FH (ENSCCAG00000031699)	KMO (ENSCCAG00000036275) #7	OPN3 (ENSCCAG00000030966) #8	WDR64 (ENSCCAG00000027334) #9	EXO1 (ENSCCAG00000021808) #10	MAP1LC3C (ENSCCAG00000015684) #12	PLD5 (ENSCCAG00000033339) #14	CEP170 (ENSCCAG00000030281) #16	ENSCCAG00000035019	SDCCAG8 (ENSCCAG00000024200) #17	AKT3 (ENSCCAG00000022873) #18	ZBTB18 (ENSCCAG00000027386) #22	ENSCCAG00000012153	ENSCCAG00000034313	C1orf100 (ENSCCAG00000026529) #23	ADSS (ENSCCAG00000019985) #24	CATSPERE (ENSCCAG00000024353) #25	DESI2 (ENSCCAG00000032727) #27	ENSCCAG00000029940	ENSCCAG00000035009 #28	ENSCCAG00000037859 #29	ENSCCAG00000032757 #30	KIF26B (ENSCCAG00000031008)	ENSCCAG00000021180	SMYD3 (ENSCCAG00000021189) #31	TFB2M (ENSCCAG00000028811) #32	CNST (ENSCCAG00000038009) #34
Marmoset	MODERN SPECIES	10	ENSCJAG00000080318	KMO (ENSCJAG00000017333) #7	OPN3 (ENSCJAG00000017298) #8	ENSCJAG00000079675	WDR64 (ENSCJAG00000017281) #9	EXO1 (ENSCJAG00000017241) #10	BECN2 (ENSCJAG00000021914) #11	MAP1LC3C (ENSCJAG00000080978) #12	PLD5 (ENSCJAG00000017218) #14	ENSCJAG00000077919	CEP170 (ENSCJAG00000017155) #16	SDCCAG8 (ENSCJAG00000017112) #17	ENSCJAG00000086445	AKT3 (ENSCJAG00000017090) #18	ENSCJAG00000076464	ZBTB18 (ENSCJAG00000040735) #22	ENSCJAG00000085383	C1orf100 (ENSCJAG00000017074) #23	ADSS2 (ENSCJAG00000017069) #24	CATSPERE (ENSCJAG00000017054) #25	DESI2 (ENSCJAG00000017043) #27	ENSCJAG00000048443 #28	HNRNPU (ENSCJAG00000016914) #29	ENSCJAG00000076624 ##21	ENSCJAG00000086913 ##15	ENSCJAG00000085469 ##19	ENSCJAG00000075122	EFCAB2 (ENSCJAG00000016907) #30	KIF26B (ENSCJAG00000016866)	ENSCJAG00000070862	ENSCJAG00000055416
Mas night monkey	MODERN SPECIES	1115	GREM2 (ENSANAG00000019563)	ENSANAG00000024783	RGS7 (ENSANAG00000035979)	ENSANAG00000034794	KMO (ENSANAG00000032312) #7	OPN3 (ENSANAG00000037150) #8	ENSANAG00000028678	WDR64 (ENSANAG00000022900) #9	EXO1 (ENSANAG00000020445) #10	MAP1LC3C (ENSANAG00000021613) #12	PLD5 (ENSANAG00000022321) #14	CEP170 (ENSANAG00000023200) #16	SDCCAG8 (ENSANAG00000022837) #17	ENSANAG00000022761	AKT3 (ENSANAG00000031454) #18	ZBTB18 (ENSANAG00000037877) #22	C1orf100 (ENSANAG00000029438) #23	ENSANAG00000033603 #24	CATSPERE (ENSANAG00000038006) #25	DESI2 (ENSANAG00000036524) #27	ENSANAG00000028263	ENSANAG00000029422 #28	ENSANAG00000033895 #29	EFCAB2 (ENSANAG00000033282) #30	KIF26B (ENSANAG00000030464)	SMYD3 (ENSANAG00000032109) #31	ENSANAG00000037652	TFB2M (ENSANAG00000038040) #32	CNST (ENSANAG00000022435) #34	ENSANAG00000035995	SCCPDH (ENSANAG00000017200) #35
Tarsier	MODERN SPECIES	3803																ZBTB18 (ENSTSYG00000030836) #22	C1orf100 (ENSTSYG00000004445) #23
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b.c	ENSGT00940000154209.a.b.d	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Lemuriformes	ANCESTRAL SPECIES	6	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b.c	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Mouse lemur	MODERN SPECIES	8	AGT (ENSMICG00000028058)	COG2 (ENSMICG00000004171)	PGBD5 (ENSMICG00000004140)	GALNT2 (ENSMICG00000004134)	RGS7 (ENSMICG00000003443)	ENSMICG00000003451	KMO (ENSMICG00000003459) #7	OPN3 (ENSMICG00000003465) #8	WDR64 (ENSMICG00000003466) #9	EXO1 (ENSMICG00000042831) #10	MAP1LC3C (ENSMICG00000041705) #12	PLD5 (ENSMICG00000003488) #14	CEP170 (ENSMICG00000011831) #16	SDCCAG8 (ENSMICG00000015485) #17	AKT3 (ENSMICG00000015514) #18	ZBTB18 (ENSMICG00000007600) #22	C1orf100 (ENSMICG00000042924) #23	ADSS2 (ENSMICG00000035421) #24	CATSPERE (ENSMICG00000007626) #25	ENSMICG00000030505	DESI2 (ENSMICG00000034096) #27	COX20 (ENSMICG00000043634) #28	HNRNPU (ENSMICG00000004616) #29	EFCAB2 (ENSMICG00000041551) #30	KIF26B (ENSMICG00000005649)	SMYD3 (ENSMICG00000005665) #31	TFB2M (ENSMICG00000016790) #32	CNST (ENSMICG00000036496) #34	SCCPDH (ENSMICG00000014588) #35	ENSMICG00000034974	AHCTF1 (ENSMICG00000014617) #36
Lemuriformes_a	ANCESTRAL SPECIES	113		ENSGT00940000161899	ENSGT00940000154209.a.b.c	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Coquerels sifaka	MODERN SPECIES	304			FMN2 (ENSPCOG00000018209)	GREM2 (ENSPCOG00000008595)	RGS7 (ENSPCOG00000023989)	ENSPCOG00000021373	KMO (ENSPCOG00000017846) #7	OPN3 (ENSPCOG00000025862) #8	WDR64 (ENSPCOG00000013811) #9	EXO1 (ENSPCOG00000003699) #10	MAP1LC3C (ENSPCOG00000017365) #12	PLD5 (ENSPCOG00000013665) #14	CEP170 (ENSPCOG00000024128) #16	SDCCAG8 (ENSPCOG00000023982) #17	AKT3 (ENSPCOG00000026902) #18	ZBTB18 (ENSPCOG00000027655) #22	C1orf100 (ENSPCOG00000005357) #23	ADSS2 (ENSPCOG00000024381) #24	CATSPERE (ENSPCOG00000011368) #25	DESI2 (ENSPCOG00000026547) #27	ENSPCOG00000023802	ENSPCOG00000020107 #28	ENSPCOG00000018655 #29	EFCAB2 (ENSPCOG00000019391) #30	KIF26B (ENSPCOG00000022607)	SMYD3 (ENSPCOG00000019858) #31	ENSPCOG00000018802	TFB2M (ENSPCOG00000017595) #32	ENSPCOG00000025467	CNST (ENSPCOG00000014228) #34	SCCPDH (ENSPCOG00000019439) #35
Greater bamboo lemur	MODERN SPECIES	75	ENSPSMG00000023214	GREM2 (ENSPSMG00000023211)	ENSPSMG00000023210	RGS7 (ENSPSMG00000023203)	FH (ENSPSMG00000023173)	KMO (ENSPSMG00000023160) #7	OPN3 (ENSPSMG00000023132) #8	WDR64 (ENSPSMG00000023125) #9	EXO1 (ENSPSMG00000023090) #10	BECN2 (ENSPSMG00000023064) #11	MAP1LC3C (ENSPSMG00000023056) #12	PLD5 (ENSPSMG00000023045) #14	CEP170 (ENSPSMG00000022916) #16	SDCCAG8 (ENSPSMG00000022738) #17	AKT3 (ENSPSMG00000022616) #18	ZBTB18 (ENSPSMG00000022492) #22	ENSPSMG00000022482	C1orf100 (ENSPSMG00000022478) #23	ADSS2 (ENSPSMG00000022472) #24	CATSPERE (ENSPSMG00000022446) #25	ENSPSMG00000022414 #27	COX20 (ENSPSMG00000022388) #28	HNRNPU (ENSPSMG00000022205) #29	EFCAB2 (ENSPSMG00000021989) #30	KIF26B (ENSPSMG00000021984)	SMYD3 (ENSPSMG00000021959) #31	TFB2M (ENSPSMG00000021950) #32	CNST (ENSPSMG00000021909) #34	SCCPDH (ENSPSMG00000021861) #35
Bushbaby	MODERN SPECIES	256										ENSOGAG00000025244 #11	MAP1LC3C (ENSOGAG00000005130) #12	PLD5 (ENSOGAG00000032441) #14	CEP170 (ENSOGAG00000024170) #16	SDCCAG8 (ENSOGAG00000016400) #17	AKT3 (ENSOGAG00000016417) #18	ZBTB18 (ENSOGAG00000013580) #22	C1orf100 (ENSOGAG00000006163) #23	ADSS2 (ENSOGAG00000006165) #24	CATSPERE (ENSOGAG00000006168) #25	HNRNPU (ENSOGAG00000014024) #29	KIF26B (ENSOGAG00000027006)	ENSOGAG00000010891 #31	ENSOGAG00000030964 #31	TFB2M (ENSOGAG00000007823) #32	CNST (ENSOGAG00000007827) #34	SCCPDH (ENSOGAG00000007830) #35	AHCTF1 (ENSOGAG00000003786) #36	CDC42BPA (ENSOGAG00000016679)	COQ8A (ENSOGAG00000016671)	PSEN2 (ENSOGAG00000016839)	ENSOGAG00000034519 #11
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Glires	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Lagomorpha	ANCESTRAL SPECIES	243										ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27
Rabbit	MODERN SPECIES	7	ENSOCUG00000025911	EDARADD (ENSOCUG00000022288)	ERO1B (ENSOCUG00000012789)	GPR137B (ENSOCUG00000012779)	ENSOCUG00000028015	ENSOCUG00000025961 #8	ENSOCUG00000007716 #9	BECN2 (ENSOCUG00000017468) #11	ENSOCUG00000027414 #12	ENSOCUG00000034818	PLD5 (ENSOCUG00000009192) #14	CEP170 (ENSOCUG00000000173) #16	SDCCAG8 (ENSOCUG00000015881) #17	ENSOCUG00000037452	AKT3 (ENSOCUG00000015901) #18	ZBTB18 (ENSOCUG00000007968) #22	C1orf100 (ENSOCUG00000030082) #23	ADSS2 (ENSOCUG00000013982) #24	ENSOCUG00000017531	CATSPERE (ENSOCUG00000012540) #25	DESI2 (ENSOCUG00000012551) #27	ENSOCUG00000033583	ENSOCUG00000038233	ENSOCUG00000023897	ENSOCUG00000039107 #28	HNRNPU (ENSOCUG00000014469) #29	EFCAB2 (ENSOCUG00000029593) #30	KIF26B (ENSOCUG00000008220)	SMYD3 (ENSOCUG00000008229) #31	ENSOCUG00000013727	ENSOCUG00000004067 #34
Rodentia	ANCESTRAL SPECIES		ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00660000097201	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Rodentia_B	ANCESTRAL SPECIES	45	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00660000097201	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Kangaroo rat	MODERN SPECIES	354	ENSDORG00000024261	Zbtb41 (ENSDORG00000001433)	Aspm (ENSDORG00000001415)	F13b (ENSDORG00000001410)	ENSDORG00000008157	Kcnt2 (ENSDORG00000008155)	B3galt2 (ENSDORG00000023725)	Cdc73 (ENSDORG00000000552)	ENSDORG00000006154	Ro60 (ENSDORG00000006152)	Uchl5 (ENSDORG00000013932)	Cep170 (ENSDORG00000029922) #16	ENSDORG00000029309	Sdccag8 (ENSDORG00000000842) #17	Akt3 (ENSDORG00000004303) #18	ENSDORG00000029972 #22	1700016C15Rik (ENSDORG00000010973) #23	Adss (ENSDORG00000010974) #24	Desi2 (ENSDORG00000002787) #27	Cox20 (ENSDORG00000023905) #28	Hnrnpu (ENSDORG00000015491) #29	Efcab2 (ENSDORG00000027552) #30	Kif26b (ENSDORG00000027986)	Smyd3 (ENSDORG00000001030) #31	Tfb2m (ENSDORG00000026012) #32	ENSDORG00000009570 #34	Sccpdh (ENSDORG00000005002) #35	Ahctf1 (ENSDORG00000001298) #36	Cdc42bpa (ENSDORG00000010002)	Coq8a (ENSDORG00000010000)	Psen2 (ENSDORG00000001758)
Myomorpha	ANCESTRAL SPECIES	16	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00660000097201	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Lesser Egyptian jerboa	MODERN SPECIES	51	ENSJJAG00000020804	Stau2 (ENSJJAG00000020228)	Ube2w (ENSJJAG00000005058)	ENSJJAG00000018468	Grem2 (ENSJJAG00000010680)	Rgs7 (ENSJJAG00000011876)	Fh1 (ENSJJAG00000004989)	Kmo (ENSJJAG00000018020) #7	Opn3 (ENSJJAG00000020588) #8	Wdr64 (ENSJJAG00000016288) #9	Pld5 (ENSJJAG00000011744) #14	ENSJJAG00000022798	Cep170 (ENSJJAG00000014809) #16	Sdccag8 (ENSJJAG00000021886) #17	Akt3 (ENSJJAG00000010899) #18	Zbtb18 (ENSJJAG00000021234) #22	1700016C15Rik (ENSJJAG00000024007) #23	Adss (ENSJJAG00000021726) #24	ENSJJAG00000024194 #27	ENSJJAG00000019395 #28	Hnrnpu (ENSJJAG00000011371) #29	Efcab2 (ENSJJAG00000001490) #30	Kif26b (ENSJJAG00000021322)	Smyd3 (ENSJJAG00000024434) #31	Tfb2m (ENSJJAG00000019285) #32	Cnst (ENSJJAG00000019924) #34	Sccpdh (ENSJJAG00000016528) #35	Kif28 (ENSJJAG00000009428)	Ahctf1 (ENSJJAG00000015815) #36	Cdc42bpa (ENSJJAG00000010408)	Coq8a (ENSJJAG00000001225)
Muroidea	ANCESTRAL SPECIES	9	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	1473					Fh1 (ENSNGAG00000013874)	Kmo (ENSNGAG00000017177) #7	Opn3 (ENSNGAG00000013479) #8	Wdr64 (ENSNGAG00000002915) #9	ENSNGAG00000018547 #10	Becn2 (ENSNGAG00000015212) #11	Pld5 (ENSNGAG00000020901) #14	ENSNGAG00000014315	Cep170 (ENSNGAG00000019300) #16	Sdccag8 (ENSNGAG00000015552) #17	Akt3 (ENSNGAG00000013336) #18	Zbtb18 (ENSNGAG00000008361) #22	ENSNGAG00000006928	Adss (ENSNGAG00000003132) #24	ENSNGAG00000000401	Desi2 (ENSNGAG00000017919) #27	Cox20 (ENSNGAG00000002776) #28	Hnrnpu (ENSNGAG00000019075) #29	Efcab2 (ENSNGAG00000017119) #30	ENSNGAG00000013762	Smyd3 (ENSNGAG00000014029) #31	ENSNGAG00000005247	Tfb2m (ENSNGAG00000018240) #32	Cnst (ENSNGAG00000001157) #34	Sccpdh (ENSNGAG00000018881) #35	Kif28 (ENSNGAG00000013723)	Ahctf1 (ENSNGAG00000001983) #36
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Murinae	ANCESTRAL SPECIES	11	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546.c #29	ENSGT01050000248390	ENSGT00940000156546.d #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Mus	ANCESTRAL SPECIES	5	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546.c #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00730000111185.n.b	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546.c #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT00860000135936
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00730000111185.n.b	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546.c #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT00860000135936
Mouse	MODERN SPECIES		Fmn2 (ENSMUSG00000028354)	Grem2 (ENSMUSG00000050069)	Rgs7 (ENSMUSG00000026527)	Fh1 (ENSMUSG00000026526)	Kmo (ENSMUSG00000039783) #7	Opn3 (ENSMUSG00000026525) #8	Chml (ENSMUSG00000078185)	Wdr64 (ENSMUSG00000026523) #9	Exo1 (ENSMUSG00000039748) #10	Becn2 (ENSMUSG00000104158) #11	Pld5 (ENSMUSG00000055214) #14	Rbm8a2 (ENSMUSG00000078184)	Cep170 (ENSMUSG00000057335) #16	Sdccag8 (ENSMUSG00000026504) #17	Akt3 (ENSMUSG00000019699) #18	Zbtb18 (ENSMUSG00000063659) #22	1700016C15Rik (ENSMUSG00000015962) #23	Adss (ENSMUSG00000015961) #24	Catspere1 (ENSMUSG00000102483) #25	Catspere2 (ENSMUSG00000091476) #25	Desi2 (ENSMUSG00000026502) #27	Cox20 (ENSMUSG00000026500) #28	Hnrnpu (ENSMUSG00000039630) #29	Efcab2 (ENSMUSG00000026495) #30	Kif26b (ENSMUSG00000026494)	Smyd3 (ENSMUSG00000055067) #31	Tfb2m (ENSMUSG00000026492) #32	Cnst (ENSMUSG00000038949) #34	Sccpdh (ENSMUSG00000038936) #35	Kif28 (ENSMUSG00000087236)	Ahctf1 (ENSMUSG00000026491) #36
Mus_C	ANCESTRAL SPECIES	1	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546.c #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT00860000135936	ENSGT01030000234517.H.b
Steppe mouse	MODERN SPECIES	2903												Cep170 (ENSMSIG00000007906) #16	Sdccag8 (ENSMSIG00000008255) #17	ENSMSIG00000008464	Akt3 (ENSMSIG00000008489) #18	Zbtb18 (ENSMSIG00000008641) #22	1700016C15Rik (ENSMSIG00000008684) #23	Adss (ENSMSIG00000008712) #24
spretus	MODERN SPECIES		Fmn2 (MGP_SPRETEiJ_G0015740)	Grem2 (MGP_SPRETEiJ_G0015741)	Rgs7 (MGP_SPRETEiJ_G0015742)	Fh1 (MGP_SPRETEiJ_G0015743)	Kmo (MGP_SPRETEiJ_G0015744) #7	Opn3 (MGP_SPRETEiJ_G0015745) #8	Chml (MGP_SPRETEiJ_G0015746)	Wdr64 (MGP_SPRETEiJ_G0015747) #9	Exo1 (MGP_SPRETEiJ_G0015748) #10	Becn2 (MGP_SPRETEiJ_G0015749) #11	Pld5 (MGP_SPRETEiJ_G0015750) #14	MGP_SPRETEiJ_G0015751	Cep170 (MGP_SPRETEiJ_G0015752) #16	Sdccag8 (MGP_SPRETEiJ_G0015753) #17	Akt3 (MGP_SPRETEiJ_G0015754) #18	Zbtb18 (MGP_SPRETEiJ_G0015755) #22	1700016C15Rik (MGP_SPRETEiJ_G0015756) #23	Adss (MGP_SPRETEiJ_G0015757) #24	Desi2 (MGP_SPRETEiJ_G0015758) #27	Cox20 (MGP_SPRETEiJ_G0015759) #28	MGP_SPRETEiJ_G0015760 #29	Hnrnpu (MGP_SPRETEiJ_G0015761) #29	Efcab2 (MGP_SPRETEiJ_G0015762) #30	Kif26b (MGP_SPRETEiJ_G0015763)	Smyd3 (MGP_SPRETEiJ_G0015764) #31	MGP_SPRETEiJ_G0015765 #32	MGP_SPRETEiJ_G0015766 #32	Cnst (MGP_SPRETEiJ_G0015767) #34	Sccpdh (MGP_SPRETEiJ_G0015768) #35	Kif28 (MGP_SPRETEiJ_G0015769)	Ahctf1 (MGP_SPRETEiJ_G0015770) #36
Ryukyu mouse	MODERN SPECIES		MGP_CAROLIEiJ_G0014940	Grem2 (MGP_CAROLIEiJ_G0014941)	Rgs7 (MGP_CAROLIEiJ_G0014942)	Fh1 (MGP_CAROLIEiJ_G0014943)	Kmo (MGP_CAROLIEiJ_G0014944) #7	Opn3 (MGP_CAROLIEiJ_G0014945) #8	Chml (MGP_CAROLIEiJ_G0014946)	Wdr64 (MGP_CAROLIEiJ_G0014947) #9	Exo1 (MGP_CAROLIEiJ_G0014948) #10	Becn2 (MGP_CAROLIEiJ_G0014949) #11	Pld5 (MGP_CAROLIEiJ_G0014950) #14	Rbm8a2 (MGP_CAROLIEiJ_G0014951)	Cep170 (MGP_CAROLIEiJ_G0014952) #16	Sdccag8 (MGP_CAROLIEiJ_G0014953) #17	Akt3 (MGP_CAROLIEiJ_G0014954) #18	Zbtb18 (MGP_CAROLIEiJ_G0014955) #22	1700016C15Rik (MGP_CAROLIEiJ_G0014956) #23	Adss (MGP_CAROLIEiJ_G0014957) #24	MGP_CAROLIEiJ_G0014958	Desi2 (MGP_CAROLIEiJ_G0014959) #27	Cox20 (MGP_CAROLIEiJ_G0014960) #28	MGP_CAROLIEiJ_G0014961 #29	Hnrnpu (MGP_CAROLIEiJ_G0014962) #29	Efcab2 (MGP_CAROLIEiJ_G0014963) #30	Kif26b (MGP_CAROLIEiJ_G0014964)	Smyd3 (MGP_CAROLIEiJ_G0014965) #31	MGP_CAROLIEiJ_G0014966 #32	MGP_CAROLIEiJ_G0014967 #32	Cnst (MGP_CAROLIEiJ_G0014968) #34	Sccpdh (MGP_CAROLIEiJ_G0014969) #35	Kif28 (MGP_CAROLIEiJ_G0014970)
Shrew mouse	MODERN SPECIES	18	Or6y1 (MGP_PahariEiJ_G0028172)	MGP_PahariEiJ_G0028173	Grem2 (MGP_PahariEiJ_G0028174)	Rgs7 (MGP_PahariEiJ_G0028175)	Fh1 (MGP_PahariEiJ_G0028176)	Kmo (MGP_PahariEiJ_G0028177) #7	Opn3 (MGP_PahariEiJ_G0028178) #8	Chml (MGP_PahariEiJ_G0028179)	Wdr64 (MGP_PahariEiJ_G0028180) #9	Exo1 (MGP_PahariEiJ_G0028181) #10	Becn2 (MGP_PahariEiJ_G0028182) #11	Pld5 (MGP_PahariEiJ_G0028183) #14	Cep170 (MGP_PahariEiJ_G0028184) #16	Sdccag8 (MGP_PahariEiJ_G0028185) #17	Akt3 (MGP_PahariEiJ_G0028186) #18	Zbtb18 (MGP_PahariEiJ_G0028187) #22	1700016C15Rik (MGP_PahariEiJ_G0028188) #23	Adss (MGP_PahariEiJ_G0028189) #24	MGP_PahariEiJ_G0028190 #27	Cox20 (MGP_PahariEiJ_G0028191) #28	MGP_PahariEiJ_G0028192 #29	Hnrnpu (MGP_PahariEiJ_G0028193) #29	Efcab2 (MGP_PahariEiJ_G0028194) #30	Kif26b (MGP_PahariEiJ_G0028195)	Smyd3 (MGP_PahariEiJ_G0028196) #31	MGP_PahariEiJ_G0028197 #32	MGP_PahariEiJ_G0028198 #32	Cnst (MGP_PahariEiJ_G0028199) #34	Sccpdh (MGP_PahariEiJ_G0028200) #35	Kif28 (MGP_PahariEiJ_G0028201)	MGP_PahariEiJ_G0028202 #36
Rat	MODERN SPECIES	4	Grem2 (ENSRNOG00000003616)	Rgs7 (ENSRNOG00000021984)	Fh (ENSRNOG00000003653)	Kmo (ENSRNOG00000003709) #7	Chml (ENSRNOG00000067369)	Opn3 (ENSRNOG00000003778) #8	Wdr64 (ENSRNOG00000038083) #9	ENSRNOG00000064024	Exo1 (ENSRNOG00000056209) #10	Becn2 (ENSRNOG00000038076) #11	Pld5 (ENSRNOG00000003997) #14	Cep170 (ENSRNOG00000004127) #16	Sdccag8 (ENSRNOG00000004181) #17	Akt3 (ENSRNOG00000021497) #18	Rpl30l1 (ENSRNOG00000057677)	Zbtb18 (ENSRNOG00000004423) #22	C13h1orf100 (ENSRNOG00000021411) #23	Adss (ENSRNOG00000004481) #24	Catspere (ENSRNOG00000056537) #25	Desi2 (ENSRNOG00000004524) #27	Btf3-ps1 (ENSRNOG00000031864)	ENSRNOG00000066591	Hnrnpu (ENSRNOG00000033790) #29	Efcab2 (ENSRNOG00000042201) #30	Kif26b (ENSRNOG00000028624)	Smyd3 (ENSRNOG00000066304) #31	Tfb2m (ENSRNOG00000002695) #32	Cnst (ENSRNOG00000002710) #34	Sccpdh (ENSRNOG00000066712) #35	Kif28p (ENSRNOG00000050602)	Ahctf1 (ENSRNOG00000023541) #36
Cricetidae	ANCESTRAL SPECIES	13	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Cricetinae	ANCESTRAL SPECIES	4	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000154289.B	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b	ENSGT00940000156810
Golden Hamster	MODERN SPECIES	697	Spta1 (ENSMAUG00000000194)	ENSMAUG00000010198	Grem2 (ENSMAUG00000018477)	Rgs7 (ENSMAUG00000010632)	Fh1 (ENSMAUG00000003139)	Kmo (ENSMAUG00000000461) #7	Chml (ENSMAUG00000011591)	Opn3 (ENSMAUG00000010182) #8	Wdr64 (ENSMAUG00000000597) #9	ENSMAUG00000017315 #10	Pld5 (ENSMAUG00000006656) #14	ENSMAUG00000001856 #16	ENSMAUG00000001243 #16	Sdccag8 (ENSMAUG00000000358) #17	Akt3 (ENSMAUG00000016204) #18	Zbtb18 (ENSMAUG00000020134) #22	1700016C15Rik (ENSMAUG00000020005) #23	Adss (ENSMAUG00000017188) #24	Desi2 (ENSMAUG00000015341) #27	Cox20 (ENSMAUG00000009696) #28	Hnrnpu (ENSMAUG00000008842) #29	Efcab2 (ENSMAUG00000002894) #30	Kif26b (ENSMAUG00000000950)	ENSMAUG00000015084 #31	ENSMAUG00000014687	Tfb2m (ENSMAUG00000015170) #32	Cnst (ENSMAUG00000014643) #34	Sccpdh (ENSMAUG00000014050) #35	Kif28 (ENSMAUG00000011576)	Ahctf1 (ENSMAUG00000007505) #36	ENSMAUG00000018123
Chinese hamster chok1gshd	MODERN SPECIES	2	ENSCGRG00001003844	ENSCGRG00001006655	Grem2 (ENSCGRG00001002244)	Rgs7 (ENSCGRG00001018878)	Fh1 (ENSCGRG00001016572)	KMO (ENSCGRG00001021105) #7	Opn3 (ENSCGRG00001006852) #8	Wdr64 (ENSCGRG00001024578) #9	Exo1 (ENSCGRG00001014562) #10	Becn2 (ENSCGRG00001004210) #11	Pld5 (ENSCGRG00001018809) #14	Cep170 (ENSCGRG00001008216) #16	Sdccag8 (ENSCGRG00001012298) #17	ENSCGRG00001022350	Akt3 (ENSCGRG00001014427) #18	Zbtb18 (ENSCGRG00001000848) #22	1700016C15Rik (ENSCGRG00001021462) #23	ADSS (ENSCGRG00001007265) #24	ENSCGRG00001025052	ENSCGRG00001002328	Desi2 (ENSCGRG00001024954) #27	Cox20 (ENSCGRG00001024606) #28	Hnrnpu (ENSCGRG00001020525) #29	Efcab2 (ENSCGRG00001014735) #30	Kif26b (ENSCGRG00001021166)	ENSCGRG00001024111	Smyd3 (ENSCGRG00001018690) #31	ENSCGRG00001003395	Tfb2m (ENSCGRG00001000953) #32	Cnst (ENSCGRG00001019670) #34	ENSCGRG00001016196 #35
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT01060000248581.B	ENSGT01090000260024.A.a.b.a.b.a.a.b	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Prairie vole	MODERN SPECIES	14								ENSMOCG00000011680	Pld5 (ENSMOCG00000012598) #14	ENSMOCG00000020684	ENSMOCG00000018239 #16	ENSMOCG00000002769 #16	ENSMOCG00000007828	Sdccag8 (ENSMOCG00000022174) #17	Akt3 (ENSMOCG00000010696) #18	Zbtb18 (ENSMOCG00000018289) #22	1700016C15Rik (ENSMOCG00000022902) #23	Adss (ENSMOCG00000021076) #24	ENSMOCG00000017731	Desi2 (ENSMOCG00000017452) #27	Cox20 (ENSMOCG00000020586) #28	Hnrnpu (ENSMOCG00000015623) #29	Efcab2 (ENSMOCG00000016106) #30	Kif26b (ENSMOCG00000018386)	Smyd3 (ENSMOCG00000019317) #31	Tfb2m (ENSMOCG00000016864) #32	Cnst (ENSMOCG00000006613) #34	Sccpdh (ENSMOCG00000017380) #35	Kif28 (ENSMOCG00000022053)	Ahctf1 (ENSMOCG00000004774) #36	Cdc42bpa (ENSMOCG00000019771)
Northern American deer mouse	MODERN SPECIES	2	Grem2 (ENSPEMG00000029383)	Rgs7 (ENSPEMG00000015345)	Fh1 (ENSPEMG00000012348)	Kmo (ENSPEMG00000010016) #7	Opn3 (ENSPEMG00000018829) #8	Wdr64 (ENSPEMG00000015374) #9	ENSPEMG00000027400	Exo1 (ENSPEMG00000019110) #10	Becn2 (ENSPEMG00000016424) #11	Pld5 (ENSPEMG00000020103) #14	Cep170 (ENSPEMG00000020234) #16	Sdccag8 (ENSPEMG00000019543) #17	ENSPEMG00000028582	Akt3 (ENSPEMG00000019381) #18	ENSPEMG00000013477	Zbtb18 (ENSPEMG00000025154) #22	Adss (ENSPEMG00000012013) #24	ENSPEMG00000024531 #25	Desi2 (ENSPEMG00000010913) #27	Cox20 (ENSPEMG00000010346) #28	ENSPEMG00000029548	Hnrnpu (ENSPEMG00000009568) #29	ENSPEMG00000008954 #30	Kif26b (ENSPEMG00000007146)	Smyd3 (ENSPEMG00000002180) #31	Tfb2m (ENSPEMG00000018713) #32	Cnst (ENSPEMG00000018492) #34	Sccpdh (ENSPEMG00000017539) #35	Kif28 (ENSPEMG00000014020)	ENSPEMG00000016591	Ahctf1 (ENSPEMG00000000305) #36
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Sciuridae	ANCESTRAL SPECIES		ENSGT00530000063808.b	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747.h #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00910000147125	ENSGT00390000016158.i #28	ENSGT00940000156546 #29	ENSGT00940000160590.l #30	ENSGT00940000160590.k #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Marmotini	ANCESTRAL SPECIES	21	ENSGT00530000063808.b	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747.h #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT01030000235784	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158.i #28	ENSGT00940000156546 #29	ENSGT00940000160590.k #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Alpin marmot	MODERN SPECIES	12	FMN2 (ENSMMMG00000023630)	GREM2 (ENSMMMG00000023631)	RGS7 (ENSMMMG00000023632)	FH (ENSMMMG00000023640)	KMO (ENSMMMG00000023641) #7	OPN3 (ENSMMMG00000023648) #8	WDR64 (ENSMMMG00000023654) #9	EXO1 (ENSMMMG00000023668) #10	ENSMMMG00000023670 #12	BECN2 (ENSMMMG00000023671) #11	MAP1LC3C (ENSMMMG00000023673) #12	PLD5 (ENSMMMG00000023675) #14	CEP170 (ENSMMMG00000023685) #16	SDCCAG8 (ENSMMMG00000023689) #17	AKT3 (ENSMMMG00000023693) #18	ENSMMMG00000023698 #22	ENSMMMG00000023703	C1orf100 (ENSMMMG00000023704) #23	ADSS2 (ENSMMMG00000023707) #24	ENSMMMG00000023709 #25	DESI2 (ENSMMMG00000023711) #27	COX20 (ENSMMMG00000023713) #28	HNRNPU (ENSMMMG00000023721) #29	EFCAB2 (ENSMMMG00000024005) #30	KIF26B (ENSMMMG00000024009)	SMYD3 (ENSMMMG00000024012) #31	TFB2M (ENSMMMG00000024017) #32	CNST (ENSMMMG00000024021) #34	SCCPDH (ENSMMMG00000024025) #35	ENSMMMG00000024026	ENSMMMG00000024027
Marmotini_b	ANCESTRAL SPECIES	84		ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747.h #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT01030000235784	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158.i #28	ENSGT00940000156546 #29	ENSGT00940000160590.k #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Arctic ground squirrel	MODERN SPECIES	79	GREM2 (ENSUPAG00010018995)	RGS7 (ENSUPAG00010018948)	FH (ENSUPAG00010018928)	KMO (ENSUPAG00010018908) #7	OPN3 (ENSUPAG00010018902) #8	WDR64 (ENSUPAG00010018776) #9	ENSUPAG00010018764	EXO1 (ENSUPAG00010018752) #10	ENSUPAG00010018744 #12	BECN2 (ENSUPAG00010018741) #11	MAP1LC3C (ENSUPAG00010018734) #12	PLD5 (ENSUPAG00010018694) #14	CEP170 (ENSUPAG00010018567) #16	SDCCAG8 (ENSUPAG00010018478) #17	AKT3 (ENSUPAG00010018428) #18	ZBTB18 (ENSUPAG00010018400) #22	ENSUPAG00010018394	C1orf100 (ENSUPAG00010018380) #23	ADSS2 (ENSUPAG00010018358) #24	ENSUPAG00010018323 #25	DESI2 (ENSUPAG00010018313) #27	ENSUPAG00010018307 #28	HNRNPU (ENSUPAG00010018254) #29	EFCAB2 (ENSUPAG00010018238) #30	KIF26B (ENSUPAG00010018207)	SMYD3 (ENSUPAG00010018170) #31	ENSUPAG00010018160 #32	CNST (ENSUPAG00010018148) #34	SCCPDH (ENSUPAG00010018131) #35
Squirrel	MODERN SPECIES	126		FMN2 (ENSSTOG00000025339)	GREM2 (ENSSTOG00000007628)	RGS7 (ENSSTOG00000006862)	FH (ENSSTOG00000012681)	KMO (ENSSTOG00000012690) #7	OPN3 (ENSSTOG00000012707) #8	ENSSTOG00000012715 #9	BECN2 (ENSSTOG00000027748) #11	MAP1LC3C (ENSSTOG00000010423) #12	PLD5 (ENSSTOG00000031877) #14	CEP170 (ENSSTOG00000008203) #16	SDCCAG8 (ENSSTOG00000010585) #17	ENSSTOG00000030430	AKT3 (ENSSTOG00000010595) #18	ZBTB18 (ENSSTOG00000004290) #22	C1orf100 (ENSSTOG00000022394) #23	ADSS2 (ENSSTOG00000004376) #24	DESI2 (ENSSTOG00000004752) #27	COX20 (ENSSTOG00000000151) #28	ENSSTOG00000000153 #29	ENSSTOG00000031476 #30	KIF26B (ENSSTOG00000028101)	SMYD3 (ENSSTOG00000028065) #31	TFB2M (ENSSTOG00000034162) #32	CNST (ENSSTOG00000000432) #34	ENSSTOG00000025585	SCCPDH (ENSSTOG00000007502) #35	ENSSTOG00000021998	AHCTF1 (ENSSTOG00000010795) #36	CDC42BPA (ENSSTOG00000015415)
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	3	ENSSVLG00005020174	RGS7 (ENSSVLG00005020300)	FH (ENSSVLG00005020886)	KMO (ENSSVLG00005021004) #7	OPN3 (ENSSVLG00005021384) #8	WDR64 (ENSSVLG00005021468) #9	EXO1 (ENSSVLG00005021837) #10	ENSSVLG00005022002 #12	BECN2 (ENSSVLG00005022043) #11	MAP1LC3C (ENSSVLG00005022067) #12	PLD5 (ENSSVLG00005022151) #14	ENSSVLG00005022301	CEP170 (ENSSVLG00005022337) #16	SDCCAG8 (ENSSVLG00005022441) #17	AKT3 (ENSSVLG00005022494) #18	ZBTB18 (ENSSVLG00005022559) #22	C1orf100 (ENSSVLG00005022598) #23	ENSSVLG00005022682 #24	CATSPERE (ENSSVLG00005022809) #25	DESI2 (ENSSVLG00005023102) #27	ENSSVLG00005023149	ENSSVLG00005023185 #28	HNRNPU (ENSSVLG00005023262) #29	ENSSVLG00005023557 #30	KIF26B (ENSSVLG00005023636)	ENSSVLG00005023779	ENSSVLG00005023802	SMYD3 (ENSSVLG00005023822) #31	TFB2M (ENSSVLG00005023868) #32	ENSSVLG00005023906	ENSSVLG00005009011 #34
Eurasian red squirrel	MODERN SPECIES	113															ENSSVLG00005016262	ENSSVLG00005016172 #22
Hystricomorpha	ANCESTRAL SPECIES	49	ENSGT00940000156376	ENSGT00940000162504	ENSGT00390000017528	ENSGT01030000234620.a.b.b.b	ENSGT00530000064210	ENSGT00390000011724	ENSGT00950000182836.b.a.b	ENSGT00940000156989	ENSGT00960000186787	ENSGT00940000156484.b	ENSGT00940000157923	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Naked mole-rat female	MODERN SPECIES	16	ENSHGLG00000028910	ENSHGLG00000037874	ENSHGLG00000005464	ENSHGLG00000032112	MAP1LC3C (ENSHGLG00000037027) #12	ENSHGLG00000004656 #14	ENSHGLG00000040176	ENSHGLG00000006833	ENSHGLG00000043505	ENSHGLG00000011191	ENSHGLG00000006465 #16	ENSHGLG00000038674 #16	ENSHGLG00000004271 #17	AKT3 (ENSHGLG00000006424) #18	ENSHGLG00000043051	ZBTB18 (ENSHGLG00000003880) #22	ADSS (ENSHGLG00000007672) #24	ENSHGLG00000009917 #23	ENSHGLG00000041745 #25	ENSHGLG00000035202 #27	ENSHGLG00000015935	ENSHGLG00000043796	COX20 (ENSHGLG00000015836) #28	ENSHGLG00000010594 #29	ENSHGLG00000042794	ENSHGLG00000034325 #30	ENSHGLG00000015928	ENSHGLG00000044814	ENSHGLG00000020542	ENSHGLG00000040776	ENSHGLG00000015190 #31
Hystricomorpha_a	ANCESTRAL SPECIES	13	ENSGT00940000162770	ENSGT00940000156376	ENSGT00940000162504	ENSGT00390000017528	ENSGT01030000234620.a.b.b.b	ENSGT00530000064210	ENSGT00390000011724	ENSGT00950000182836.b.a.b	ENSGT00940000156989	ENSGT00940000156484.b	ENSGT00940000157923	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Guinea pig	MODERN SPECIES	13	ENSCPOG00000033847	PACC1 (ENSCPOG00000009329)	PPP2R5A (ENSCPOG00000040049)	DTL (ENSCPOG00000014965)	INTS7 (ENSCPOG00000014960)	LPGAT1 (ENSCPOG00000011269)	NEK2 (ENSCPOG00000011264)	SLC30A1 (ENSCPOG00000013692)	PSEN2 (ENSCPOG00000001827)	PLD5 (ENSCPOG00000033411) #14	ENSCPOG00000002221	ENSCPOG00000002683 #16	ENSCPOG00000034860 #16	SDCCAG8 (ENSCPOG00000015503) #17	AKT3 (ENSCPOG00000015504) #18	ZBTB18 (ENSCPOG00000035384) #22	C1orf100 (ENSCPOG00000002339) #23	ADSS2 (ENSCPOG00000002342) #24	DESI2 (ENSCPOG00000002091) #27	COX20 (ENSCPOG00000032295) #28	HNRNPU (ENSCPOG00000011887) #29	EFCAB2 (ENSCPOG00000024335) #30	KIF26B (ENSCPOG00000001048)	SMYD3 (ENSCPOG00000002655) #31	ENSCPOG00000013225 #32	CNST (ENSCPOG00000012012) #34	SCCPDH (ENSCPOG00000029999) #35	ENSCPOG00000036159	AHCTF1 (ENSCPOG00000009216) #36	CDC42BPA (ENSCPOG00000011457)	COQ8A (ENSCPOG00000011445)
Hystricomorpha_b	ANCESTRAL SPECIES	4	ENSGT00940000156376	ENSGT00940000162504	ENSGT00390000017528	ENSGT01030000234620.a.b.b.b	ENSGT00530000064210	ENSGT00390000011724	ENSGT00950000182836.b.a.b	ENSGT00940000156989	ENSGT00940000156484.b	ENSGT00940000157923	ENSGT00950000183059.b.a.b #14	ENSGT00660000097201	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060.t #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Long-tailed chinchilla	MODERN SPECIES	113	ATF3 (ENSCLAG00000013767)	ENSCLAG00000007912	PACC1 (ENSCLAG00000009570)	PPP2R5A (ENSCLAG00000012816)	DTL (ENSCLAG00000014236)	INTS7 (ENSCLAG00000011748)	LPGAT1 (ENSCLAG00000011509)	NEK2 (ENSCLAG00000010880)	SLC30A1 (ENSCLAG00000009695)	PSEN2 (ENSCLAG00000013788)	PLD5 (ENSCLAG00000014400) #14	ENSCLAG00000010377	CEP170 (ENSCLAG00000015564) #16	SDCCAG8 (ENSCLAG00000011676) #17	ENSCLAG00000009649 #18	ZBTB18 (ENSCLAG00000015788) #22	C1orf100 (ENSCLAG00000007599) #23	ADSS2 (ENSCLAG00000008748) #24	CATSPERE (ENSCLAG00000009169) #25	DESI2 (ENSCLAG00000011829) #27	HNRNPU (ENSCLAG00000007100) #29	ENSCLAG00000007770 #28	EFCAB2 (ENSCLAG00000008343) #30	KIF26B (ENSCLAG00000012108)	SMYD3 (ENSCLAG00000010031) #31	TFB2M (ENSCLAG00000008614) #32	CNST (ENSCLAG00000008046) #34	SCCPDH (ENSCLAG00000009869) #35	ENSCLAG00000014434	AHCTF1 (ENSCLAG00000007804) #36	CDC42BPA (ENSCLAG00000012875)
Degu	MODERN SPECIES	58	INTS7 (ENSODEG00000013809)	LPGAT1 (ENSODEG00000013429)	ENSODEG00000014021	ENSODEG00000013939	SLC30A1 (ENSODEG00000014581)	PSEN2 (ENSODEG00000013898)	PLD5 (ENSODEG00000013817) #14	ENSODEG00000014152	ENSODEG00000014979	ENSODEG00000013620 #16	ENSODEG00000016144 #16	ENSODEG00000014847 #16	SDCCAG8 (ENSODEG00000013437) #17	ENSODEG00000013767	AKT3 (ENSODEG00000013255) #18	ZBTB18 (ENSODEG00000014080) #22	C1orf100 (ENSODEG00000012902) #23	ADSS2 (ENSODEG00000015411) #24	ENSODEG00000013295 #27	ENSODEG00000013410	ENSODEG00000013336 #28	ENSODEG00000014458 #29	ENSODEG00000014016	ENSODEG00000014131	EFCAB2 (ENSODEG00000013516) #30	KIF26B (ENSODEG00000013218)	SMYD3 (ENSODEG00000012912) #31	ENSODEG00000013735 #32	ENSODEG00000020123	CNST (ENSODEG00000013290) #34	SCCPDH (ENSODEG00000013300) #35
Laurasiatheria	ANCESTRAL SPECIES	28	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155092.b #22
Common shrew	MODERN SPECIES	12065																ZBTB18 (ENSSARG00000002984) #22
Hedgehog	MODERN SPECIES	15407																ZBTB18 (ENSEEUG00000014181) #22
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Artiodactyla	ANCESTRAL SPECIES	25			ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Suina	ANCESTRAL SPECIES	55									ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005.k #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799.j #35	ENSGT00940000163104	ENSGT00390000018900 #36
Pig	MODERN SPECIES	1	PSEN2 (ENSSSCG00000010860)	COQ8A (ENSSSCG00000010861)	CDC42BPA (ENSSSCG00000010862)	AHCTF1 (ENSSSCG00000010863) #36	ENSSSCG00000060854	SCCPDH (ENSSSCG00000010866) #35	ENSSSCG00000051937	EXO1 (ENSSSCG00000010865) #10	ENSSSCG00000060649	MAP1LC3C (ENSSSCG00000054590) #12	BECN2 (ENSSSCG00000010868) #11	PLD5 (ENSSSCG00000021132) #14	CEP170 (ENSSSCG00000030502) #16	SDCCAG8 (ENSSSCG00000035136) #17	AKT3 (ENSSSCG00000010872) #18	ZBTB18 (ENSSSCG00000060083) #22	C1orf100 (ENSSSCG00000053143) #23	ADSS2 (ENSSSCG00000010874) #24	CATSPERE (ENSSSCG00000035850) #25	DESI2 (ENSSSCG00000010876) #27	ENSSSCG00000044211	ENSSSCG00000059272	ENSSSCG00000059887	COX20 (ENSSSCG00000039618) #28	HNRNPU (ENSSSCG00000010877) #29	EFCAB2 (ENSSSCG00000010878) #30	ENSSSCG00000063102	KIF26B (ENSSSCG00000010879)	SMYD3 (ENSSSCG00000022034) #31	TFB2M (ENSSSCG00000023775) #32	CNST (ENSSSCG00000010882) #34
Chacoan peccary	MODERN SPECIES	81									EXO1 (ENSCWAG00000001682) #10	MAP1LC3C (ENSCWAG00000001710) #12	ENSCWAG00000001728 #11	PLD5 (ENSCWAG00000001768) #14	CEP170 (ENSCWAG00000001838) #16	SDCCAG8 (ENSCWAG00000001897) #17	AKT3 (ENSCWAG00000001916) #18	ZBTB18 (ENSCWAG00000001944) #22	C1orf100 (ENSCWAG00000001960) #23	ADSS2 (ENSCWAG00000001982) #24	CATSPERE (ENSCWAG00000002042) #25	ENSCWAG00000002184 #27	COX20 (ENSCWAG00000002207) #28	HNRNPU (ENSCWAG00000002240) #29	EFCAB2 (ENSCWAG00000002370) #30	KIF26B (ENSCWAG00000002398)	SMYD3 (ENSCWAG00000002432) #31	TFB2M (ENSCWAG00000002455) #32	CNST (ENSCWAG00000002475) #34	SCCPDH (ENSCWAG00000002496) #35	ENSCWAG00000002521	AHCTF1 (ENSCWAG00000002590) #36	CDC42BPA (ENSCWAG00000002744)
Artiodactyla_a	ANCESTRAL SPECIES	26			ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Camelidae	ANCESTRAL SPECIES	42				ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Arabian camel	MODERN SPECIES	15	SWT1 (ENSCDRG00005015345)	TRMT1L (ENSCDRG00005015223)	RNF2 (ENSCDRG00005015182)	GREM2 (ENSCDRG00005015158)	RGS7 (ENSCDRG00005014699)	FH (ENSCDRG00005014551)	KMO (ENSCDRG00005014408) #7	CHML (ENSCDRG00005014383)	WDR64 (ENSCDRG00005014181) #9	EXO1 (ENSCDRG00005014129) #10	BECN2 (ENSCDRG00005014073) #11	PLD5 (ENSCDRG00005013810) #14	CEP170 (ENSCDRG00005013439) #16	SDCCAG8 (ENSCDRG00005013241) #17	ENSCDRG00005013167 #18	ENSCDRG00005013085 #22	C1orf100 (ENSCDRG00005013003) #23	ADSS (ENSCDRG00005012920) #24	ENSCDRG00005012892	CATSPERE (ENSCDRG00005012216) #25	DESI2 (ENSCDRG00005012108) #27	COX20 (ENSCDRG00005012045) #28	HNRNPU (ENSCDRG00005010945) #29	EFCAB2 (ENSCDRG00005010782) #30	KIF26B (ENSCDRG00005010480)	SMYD3 (ENSCDRG00005010356) #31	TFB2M (ENSCDRG00005010290) #32	ENSCDRG00005010260	CNST (ENSCDRG00005010140) #34	SCCPDH (ENSCDRG00005009923) #35	ENSCDRG00005009657
Artiodactyla_b	ANCESTRAL SPECIES	26		ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00960000192543	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Cetacea	ANCESTRAL SPECIES	23	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00960000192543	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008496.j.a.a.b	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Blue whale	MODERN SPECIES		ENSBMSG00010003118 #8	WDR64 (ENSBMSG00010003150) #9	EXO1 (ENSBMSG00010003255) #10	MAP1LC3C (ENSBMSG00010003275) #12	ENSBMSG00010003287	ENSBMSG00010003296 #11	ENSBMSG00010003312	PLD5 (ENSBMSG00010003324) #14	ENSBMSG00010003345	ENSBMSG00010003348	ENSBMSG00010003352	CEP170 (ENSBMSG00010003367) #16	SDCCAG8 (ENSBMSG00010003393) #17	ENSBMSG00010003399	AKT3 (ENSBMSG00010003415) #18	ZBTB18 (ENSBMSG00010003552) #22	C1orf100 (ENSBMSG00010003557) #23	ENSBMSG00010000022 #24	CATSPERE (ENSBMSG00010000070) #25	ENSBMSG00010000258	DESI2 (ENSBMSG00010000280) #27	ENSBMSG00010000350	COX20 (ENSBMSG00010000364) #28	HNRNPU (ENSBMSG00010000467) #29	EFCAB2 (ENSBMSG00010000616) #30	ENSBMSG00010000642	KIF26B (ENSBMSG00010000697)	SMYD3 (ENSBMSG00010000801) #31	TFB2M (ENSBMSG00010000824) #32	CNST (ENSBMSG00010000841) #34	SCCPDH (ENSBMSG00010000887) #35
Odontoceti	ANCESTRAL SPECIES	24	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00960000192543	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008496.j.a.a.b	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000167085.b.a	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Sperm whale	MODERN SPECIES	15	UCK2 (ENSPCTG00005002066)	RGS7 (ENSPCTG00005001794)	FH (ENSPCTG00005001704)	KMO (ENSPCTG00005001590) #7	CHML (ENSPCTG00005001557)	ENSPCTG00005001549	WDR64 (ENSPCTG00005001451) #9	EXO1 (ENSPCTG00005001388) #10	ENSPCTG00005001333 #11	ENSPCTG00005001305	PLD5 (ENSPCTG00005001235) #14	ENSPCTG00005001193	CEP170 (ENSPCTG00005001113) #16	SDCCAG8 (ENSPCTG00005001062) #17	AKT3 (ENSPCTG00005000992) #18	ZBTB18 (ENSPCTG00005000940) #22	C1orf100 (ENSPCTG00005000925) #23	ADSS (ENSPCTG00005000901) #24	CATSPERE (ENSPCTG00005000795) #25	ENSPCTG00005000757	DESI2 (ENSPCTG00005000724) #27	ENSPCTG00005000694 #28	HNRNPU (ENSPCTG00005000493) #29	ENSPCTG00005000456	EFCAB2 (ENSPCTG00005000430) #30	KIF26B (ENSPCTG00005000340)	SMYD3 (ENSPCTG00005021502) #31	ENSPCTG00005021473	TFB2M (ENSPCTG00005021445) #32	CNST (ENSPCTG00005021399) #34	ENSPCTG00005021352
Odontoceti_a	ANCESTRAL SPECIES	27	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00960000192543	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008496.j.a.a.b	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000167085.b.a	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Dolphin	MODERN SPECIES	2175																ZBTB18 (ENSTTRG00000000615) #22
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00960000192543	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008496.j.a.a.b	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000174587	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00970000198226	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000167085.b.a	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000157251.gb.a.b	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT01010000223738	ENSGT00950000183142.a.b.a.b #32
Vaquita	MODERN SPECIES		FH (ENSPSNG00000001550)	KMO (ENSPSNG00000001618) #7	CHML (ENSPSNG00000001704)	ENSPSNG00000001713	WDR64 (ENSPSNG00000001764) #9	EXO1 (ENSPSNG00000001879) #10	MAP1LC3C (ENSPSNG00000001915) #12	ENSPSNG00000001924	ENSPSNG00000001933 #11	PLD5 (ENSPSNG00000001962) #14	ENSPSNG00000002004	CEP170 (ENSPSNG00000002060) #16	ENSPSNG00000002116	SDCCAG8 (ENSPSNG00000002144) #17	ENSPSNG00000002237 #18	ZBTB18 (ENSPSNG00000002322) #22	ADSS2 (ENSPSNG00000002341) #24	CATSPERE (ENSPSNG00000002409) #25	ENSPSNG00000002432	DESI2 (ENSPSNG00000002454) #27	COX20 (ENSPSNG00000002553) #28	HNRNPU (ENSPSNG00000002595) #29	EFCAB2 (ENSPSNG00000002698) #30	ENSPSNG00000002754	ENSPSNG00000002773	ENSPSNG00000002787	KIF26B (ENSPSNG00000002808)	SMYD3 (ENSPSNG00000002836) #31	ENSPSNG00000002849	TFB2M (ENSPSNG00000002861) #32	CNST (ENSPSNG00000002886) #34
Monodontidae	ANCESTRAL SPECIES		ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00960000192543	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008496.j.a.a.b	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000174587	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00970000198226	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000167085.b.a	ENSGT00940000160590 #30	ENSGT00940000157251.gb.a.b	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT01010000223738	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34
Narwhal	MODERN SPECIES	304	RGS7 (ENSMMNG00015003213)	FH (ENSMMNG00015003102)	KMO (ENSMMNG00015002991) #7	CHML (ENSMMNG00015002946)	ENSMMNG00015002941	WDR64 (ENSMMNG00015002862) #9	EXO1 (ENSMMNG00015002760) #10	MAP1LC3C (ENSMMNG00015002739) #12	ENSMMNG00015002733	ENSMMNG00015002712 #11	PLD5 (ENSMMNG00015002650) #14	ENSMMNG00015002619	CEP170 (ENSMMNG00015002570) #16	SDCCAG8 (ENSMMNG00015002446) #17	AKT3 (ENSMMNG00015002390) #18	ZBTB18 (ENSMMNG00015002362) #22	ADSS2 (ENSMMNG00015002323) #24	CATSPERE (ENSMMNG00015002177) #25	ENSMMNG00015002116	DESI2 (ENSMMNG00015002070) #27	COX20 (ENSMMNG00015002034) #28	HNRNPU (ENSMMNG00015001837) #29	ENSMMNG00015001758	EFCAB2 (ENSMMNG00015001711) #30	ENSMMNG00015001686	KIF26B (ENSMMNG00015001645)	SMYD3 (ENSMMNG00015001622) #31	ENSMMNG00015001589	ENSMMNG00015001571	TFB2M (ENSMMNG00015001555) #32	CNST (ENSMMNG00015001499) #34
Beluga whale	MODERN SPECIES	21		ENSDLEG00000013242	RGS7 (ENSDLEG00000013175)	FH (ENSDLEG00000013143)	KMO (ENSDLEG00000013114) #7	CHML (ENSDLEG00000013107)	WDR64 (ENSDLEG00000012993) #9	EXO1 (ENSDLEG00000012936) #10	MAP1LC3C (ENSDLEG00000012929) #12	ENSDLEG00000012926	ENSDLEG00000012921 #11	PLD5 (ENSDLEG00000012909) #14	CEP170 (ENSDLEG00000012739) #16	SDCCAG8 (ENSDLEG00000012672) #17	AKT3 (ENSDLEG00000012542) #18	ENSDLEG00000012518 #22	C1orf100 (ENSDLEG00000012503) #23	ADSS (ENSDLEG00000012482) #24	ENSDLEG00000012469 #25	ENSDLEG00000012464	DESI2 (ENSDLEG00000012443) #27	ENSDLEG00000012436 #28	HNRNPU (ENSDLEG00000012413) #29	ENSDLEG00000012400	EFCAB2 (ENSDLEG00000012377) #30	ENSDLEG00000012364	KIF26B (ENSDLEG00000012323)	ENSDLEG00000012311	ENSDLEG00000012296 #31	ENSDLEG00000012281	ENSDLEG00000012269
Pecora	ANCESTRAL SPECIES	22	ENSGT01030000234579.C	ENSGT00390000010760	ENSGT01100000263557.A.b.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00940000155028.q.a.c	ENSGT01100000263504.a.b.b.b.b
Yarkand deer	MODERN SPECIES	5	DPT (ENSCHYG00000013923)	ENSCHYG00000013793	RGS7 (ENSCHYG00000012979)	FH (ENSCHYG00000012784)	KMO (ENSCHYG00000012655) #7	ENSCHYG00000012605	WDR64 (ENSCHYG00000012124) #9	EXO1 (ENSCHYG00000012020) #10	MAP1LC3C (ENSCHYG00000018633) #12	BECN2 (ENSCHYG00000018602) #11	PLD5 (ENSCHYG00000018377) #14	CEP170 (ENSCHYG00000017491) #16	ENSCHYG00000017307	SDCCAG8 (ENSCHYG00000016893) #17	AKT3 (ENSCHYG00000016172) #18	ZBTB18 (ENSCHYG00000015900) #22	C1orf100 (ENSCHYG00000015712) #23	ENSCHYG00000015654	ADSS2 (ENSCHYG00000015582) #24	CATSPERE (ENSCHYG00000015191) #25	DESI2 (ENSCHYG00000015061) #27	ENSCHYG00000015006	COX20 (ENSCHYG00000014922) #28	HNRNPU (ENSCHYG00000013134) #29	ENSCHYG00000013042	ENSCHYG00000013023	ENSCHYG00000012934 #30	ENSCHYG00000012805	KIF26B (ENSCHYG00000012555)	SMYD3 (ENSCHYG00000012418) #31	ENSCHYG00000012247 #32
Percora_a	ANCESTRAL SPECIES	15	ENSGT00390000010760	ENSGT01100000263557.A.b.b.d	ENSGT01100000263557.A.b.b.c	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00390000001157.C.kc	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00940000155028.q.a.c
Siberian musk deer	MODERN SPECIES	191												CEP170 (ENSMMSG00000003496) #16	ENSMMSG00000003468	SDCCAG8 (ENSMMSG00000003417) #17	AKT3 (ENSMMSG00000003359) #18	ZBTB18 (ENSMMSG00000003334) #22	ENSMMSG00000003326	ENSMMSG00000003313	C1orf100 (ENSMMSG00000003308) #23	ENSMMSG00000003290 #24	CATSPERE (ENSMMSG00000003191) #25	ENSMMSG00000003153 #27	ENSMMSG00000003138 #28	HNRNPU (ENSMMSG00000002510) #29	ENSMMSG00000002446	EFCAB2 (ENSMMSG00000002421) #30	ENSMMSG00000002406	KIF26B (ENSMMSG00000002389)	SMYD3 (ENSMMSG00000002362) #31	TFB2M (ENSMMSG00000002316) #32	CNST (ENSMMSG00000002263) #34
Bovidae	ANCESTRAL SPECIES	15	ENSGT00390000010760	ENSGT01100000263557.A.b.b.d	ENSGT01100000263557.A.b.b.c	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00390000001157.C.kc	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00940000155028.q.a.c
Bovinae	ANCESTRAL SPECIES	12	ENSGT00390000010760	ENSGT01100000263557.A.b.b.d	ENSGT01100000263557.A.b.b.c	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00960000190292	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00940000155028.q.a.c	ENSGT01100000263504.a.b.b.b.b
Bos	ANCESTRAL SPECIES	12	ENSGT00390000010760	ENSGT01100000263557.A.b.b.d	ENSGT01100000263557.A.b.b.c	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00960000190292	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT01100000263481.n.a.b.a.a.a.a.a.b.a.a.b.a.a.b.a.b	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00940000155028.q.a.c
Bos_a	ANCESTRAL SPECIES	8	ENSGT01100000263557.A.b.b.d	ENSGT01100000263557.A.b.b.c	ENSGT01100000263480.a.b.a.a.b.a.a.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00960000190292	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT01100000263481.n.a.b.a.a.a.a.a.b.a.a.b.a.a.b.a.b	ENSGT00940000161909	ENSGT00390000002172.A.b	ENSGT00510000048856.A	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32
Domestic yak	MODERN SPECIES	5	ENSBGRG00000013992	ENSBGRG00000013968	RGS7 (ENSBGRG00000012889)	FH (ENSBGRG00000012621)	KMO (ENSBGRG00000012289) #7	CHML (ENSBGRG00000012256)	WDR64 (ENSBGRG00000011821) #9	EXO1 (ENSBGRG00000011413) #10	MAP1LC3C (ENSBGRG00000011311) #12	BECN2 (ENSBGRG00000011233) #11	PLD5 (ENSBGRG00000010829) #14	CEP170 (ENSBGRG00000010480) #16	ENSBGRG00000010418	SDCCAG8 (ENSBGRG00000010070) #17	AKT3 (ENSBGRG00000009711) #18	ZBTB18 (ENSBGRG00000009638) #22	ENSBGRG00000009623	C1orf100 (ENSBGRG00000009512) #23	ADSS2 (ENSBGRG00000009393) #24	ENSBGRG00000009367	CATSPERE (ENSBGRG00000009169) #25	DESI2 (ENSBGRG00000009112) #27	COX20 (ENSBGRG00000009065) #28	HNRNPU (ENSBGRG00000007853) #29	ENSBGRG00000007746	ENSBGRG00000007708	EFCAB2 (ENSBGRG00000007527) #30	KIF26B (ENSBGRG00000007186)	SMYD3 (ENSBGRG00000006939) #31	TFB2M (ENSBGRG00000006812) #32	CNST (ENSBGRG00000006731) #34
Wild yak	MODERN SPECIES	2728																ENSBMUG00000007486 #22	C1orf100 (ENSBMUG00000007471) #23	ADSS (ENSBMUG00000007466) #24	ENSBMUG00000007462	CATSPERE (ENSBMUG00000007447) #25	DESI2 (ENSBMUG00000007407) #27	COX20 (ENSBMUG00000007383) #28	HNRNPU (ENSBMUG00000007365) #29	ENSBMUG00000007328 #29	ENSBMUG00000007304	EFCAB2 (ENSBMUG00000007294) #30	KIF26B (ENSBMUG00000007283)
Bos_b	ANCESTRAL SPECIES	9	ENSGT00390000010760	ENSGT01100000263557.A.b.b.d	ENSGT01100000263557.A.b.b.c	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00390000008164.d #11	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT01100000263481.n.a.b.a.a.a.a.a.b.a.a.b.a.a.b.a.b	ENSGT00940000160590 #30	ENSGT00940000165019.a	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00940000155028.q.a.c	ENSGT01100000263504.a.b.b.b.b
Hybrid Bos Indicus	MODERN SPECIES	7	ENSBIXG00005024063	ENSBIXG00005024089	ENSBIXG00005024125	RGS7 (ENSBIXG00005024288)	FH (ENSBIXG00005004166)	KMO (ENSBIXG00005024440) #7	CHML (ENSBIXG00005024458)	WDR64 (ENSBIXG00005024607) #9	EXO1 (ENSBIXG00005024677) #10	MAP1LC3C (ENSBIXG00005024701) #12	BECN2 (ENSBIXG00005024712) #11	PLD5 (ENSBIXG00005024812) #14	CEP170 (ENSBIXG00005025170) #16	SDCCAG8 (ENSBIXG00005025302) #17	AKT3 (ENSBIXG00005025439) #18	ZBTB18 (ENSBIXG00005004344) #22	C1orf100 (ENSBIXG00005025567) #23	ADSS2 (ENSBIXG00005004358) #24	ENSBIXG00005025604	ENSBIXG00005025613	CATSPERE (ENSBIXG00005025657) #25	DESI2 (ENSBIXG00005004387) #27	COX20 (ENSBIXG00005025757) #28	HNRNPU (ENSBIXG00005025914) #29	ENSBIXG00005025963	ENSBIXG00005004429	EFCAB2 (ENSBIXG00005026031) #30	ENSBIXG00005026044	KIF26B (ENSBIXG00005026077)	ENSBIXG00005026111	SMYD3 (ENSBIXG00005026141) #31
Cow	MODERN SPECIES	7	XCL1 (ENSBTAG00000009938)	ENSBTAG00000009943	ENSBTAG00000053912	RGS7 (ENSBTAG00000005410)	FH (ENSBTAG00000021688)	KMO (ENSBTAG00000014439) #7	CHML (ENSBTAG00000010803)	WDR64 (ENSBTAG00000005200) #9	EXO1 (ENSBTAG00000009396) #10	MAP1LC3C (ENSBTAG00000012462) #12	BECN2 (ENSBTAG00000013700) #11	PLD5 (ENSBTAG00000033056) #14	CEP170 (ENSBTAG00000007566) #16	SDCCAG8 (ENSBTAG00000017775) #17	AKT3 (ENSBTAG00000017788) #18	ZBTB18 (ENSBTAG00000000385) #22	C16H1orf100 (ENSBTAG00000033127) #23	ADSS2 (ENSBTAG00000013885) #24	ENSBTAG00000044066 #25	DESI2 (ENSBTAG00000001478) #27	COX20 (ENSBTAG00000033136) #28	HNRNPU (ENSBTAG00000007606) #29	ENSBTAG00000047437	EFCAB2 (ENSBTAG00000024555) #30	KIF26B (ENSBTAG00000012715)	SMYD3 (ENSBTAG00000033180) #31	TFB2M (ENSBTAG00000000072) #32	CNST (ENSBTAG00000000511) #34	ENSBTAG00000021109	H3-3D (ENSBTAG00000011508)	SCCPDH (ENSBTAG00000003804) #35
American bison	MODERN SPECIES	3231	C17orf67 (ENSBBBG00000011112)	DGKE (ENSBBBG00000011124)	TRIM25 (ENSBBBG00000011147)	COIL (ENSBBBG00000002010)	SCPEP1 (ENSBBBG00000011172)	ENSBBBG00000008095	ENSBBBG00000007968	ENSBBBG00000006832	ENSBBBG00000011190	CCDC182 (ENSBBBG00000011196)	ENSBBBG00000011204	MRPS23 (ENSBBBG00000002034)	CUEDC1 (ENSBBBG00000008544)	VEZF1 (ENSBBBG00000008437)	SRSF1 (ENSBBBG00000011276)	ZBTB18 (ENSBBBG00000002053) #22	C1orf100 (ENSBBBG00000011297) #23	ADSS2 (ENSBBBG00000011309) #24	ENSBBBG00000011316	CATSPERE (ENSBBBG00000002070) #25	DESI2 (ENSBBBG00000011390) #27	COX20 (ENSBBBG00000011393) #28	HNRNPU (ENSBBBG00000011529) #29	ENSBBBG00000011558	EFCAB2 (ENSBBBG00000007121) #30	KIF26B (ENSBBBG00000011611)	SMYD3 (ENSBBBG00000011655) #31	TFB2M (ENSBBBG00000011663) #32	CNST (ENSBBBG00000011683) #34	ENSBBBG00000002158	ENSBBBG00000011707
Caprinae	ANCESTRAL SPECIES	12	ENSGT01030000234579.C	ENSGT00390000010760	ENSGT01100000263557.A.b.b.d	ENSGT01100000263557.A.b.b.c	ENSGT00940000156661.j	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00390000001157.C.kc	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT01100000263504.a.b.b.b.b	ENSGT00390000004799 #35
Rambouillet Sheep	MODERN SPECIES	3	ATP1B1 (ENSOARG00020007736)	DPT (ENSOARG00020007710)	ENSOARG00020007688	XCL1 (ENSOARG00020007666)	ENSOARG00020007655	RGS7 (ENSOARG00020006899)	FH (ENSOARG00020006418)	KMO (ENSOARG00020006259) #7	WDR64 (ENSOARG00020005994) #9	EXO1 (ENSOARG00020005940) #10	MAP1LC3C (ENSOARG00020005910) #12	ENSOARG00020005851	PLD5 (ENSOARG00020005705) #14	CEP170 (ENSOARG00020005464) #16	AKT3 (ENSOARG00020005210) #18	ZBTB18 (ENSOARG00020005168) #22	C1orf100 (ENSOARG00020005127) #23	ENSOARG00020005105 #24	ENSOARG00020005072 #25	DESI2 (ENSOARG00020005026) #27	COX20 (ENSOARG00020004998) #28	HNRNPU (ENSOARG00020004518) #29	ENSOARG00020004467	EFCAB2 (ENSOARG00020004432) #30	KIF26B (ENSOARG00020004096)	ENSOARG00020004035	SMYD3 (ENSOARG00020003928) #31	TFB2M (ENSOARG00020003896) #32	ENSOARG00020003854	SCCPDH (ENSOARG00020003810) #35	ENSOARG00020003724
Goat	MODERN SPECIES	7	DPT (ENSCHIG00000014401)	ENSCHIG00000025827	ENSCHIG00000017060	ENSCHIG00000024203	ENSCHIG00000016226	FH (ENSCHIG00000003286)	KMO (ENSCHIG00000018212) #7	CHML (ENSCHIG00000002071)	WDR64 (ENSCHIG00000018653) #9	EXO1 (ENSCHIG00000013001) #10	MAP1LC3C (ENSCHIG00000024130) #12	PLD5 (ENSCHIG00000017711) #14	CEP170 (ENSCHIG00000026612) #16	SDCCAG8 (ENSCHIG00000017782) #17	AKT3 (ENSCHIG00000025145) #18	ENSCHIG00000016215 #22	C1orf100 (ENSCHIG00000003781) #23	ADSS2 (ENSCHIG00000019431) #24	ENSCHIG00000010596 #25	DESI2 (ENSCHIG00000020086) #27	ENSCHIG00000014790 #28	HNRNPU (ENSCHIG00000004900) #29	ENSCHIG00000011421	EFCAB2 (ENSCHIG00000013755) #30	KIF26B (ENSCHIG00000026425)	SMYD3 (ENSCHIG00000019856) #31	ENSCHIG00000013167 #31	ENSCHIG00000024072	TFB2M (ENSCHIG00000017458) #32	CNST (ENSCHIG00000011991) #34	ENSCHIG00000022887
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.b	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Carnivora	ANCESTRAL SPECIES	14	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.d #12	ENSGT00390000008164.d #11	ENSGT00940000161852.c #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.b	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Caniformia	ANCESTRAL SPECIES	10	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.d #12	ENSGT00390000008164.d #11	ENSGT00940000161852.c #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Canidae	ANCESTRAL SPECIES	1	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00390000009320.eb.a	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852.d #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Canis_lupus	ANCESTRAL SPECIES	4	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00390000009320.eb.a	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852.d #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00950000183029.B.c.b.b.b.i.b	ENSGT00940000178689	ENSGT00390000018900 #36
Dog	MODERN SPECIES	35	FH (ENSCAFG00845004348)	KMO (ENSCAFG00845004366) #7	OPN3 (ENSCAFG00845004379) #8	CHML (ENSCAFG00845004391)	WDR64 (ENSCAFG00845004435) #9	ENSCAFG00845004494	ENSCAFG00845004504	EXO1 (ENSCAFG00845004521) #10	BECN2 (ENSCAFG00845004546) #11	MAP1LC3C (ENSCAFG00845004557) #12	PLD5 (ENSCAFG00845004571) #14	ENSCAFG00845004592	CEP170 (ENSCAFG00845004652) #16	SDCCAG8 (ENSCAFG00845004779) #17	AKT3 (ENSCAFG00845004858) #18	ZBTB18 (ENSCAFG00845004904) #22	C7H1orf100 (ENSCAFG00845005216) #23	ADSS2 (ENSCAFG00845005250) #24	CATSPERE (ENSCAFG00845005306) #25	DESI2 (ENSCAFG00845005415) #27	ENSCAFG00845005435 #28	HNRNPU (ENSCAFG00845005509) #29	ENSCAFG00845005646 #30	KIF26B (ENSCAFG00845005694)	SMYD3 (ENSCAFG00845005785) #31	TFB2M (ENSCAFG00845005847) #32	CNST (ENSCAFG00845005933) #34	SCCPDH (ENSCAFG00845006130) #35	ENSCAFG00845006160	ENSCAFG00845006225	AHCTF1 (ENSCAFG00845006427) #36
Dingo	MODERN SPECIES	271	RGS7 (ENSCAFG00020023079)	FH (ENSCAFG00020023252)	KMO (ENSCAFG00020023261) #7	ENSCAFG00020023269 #8	ENSCAFG00020023277 #8	ENSCAFG00020023286 #9	ENSCAFG00020000198	EXO1 (ENSCAFG00020000260) #10	ENSCAFG00020000314 #11	MAP1LC3C (ENSCAFG00020000378) #12	PLD5 (ENSCAFG00020000394) #14	ENSCAFG00020000451	CEP170 (ENSCAFG00020000490) #16	SDCCAG8 (ENSCAFG00020000770) #17	AKT3 (ENSCAFG00020000778) #18	ZBTB18 (ENSCAFG00020000800) #22	C1orf100 (ENSCAFG00020000808) #23	ADSS2 (ENSCAFG00020000812) #24	ENSCAFG00020000834 #25	DESI2 (ENSCAFG00020000895) #27	COX20 (ENSCAFG00020000902) #28	HNRNPU (ENSCAFG00020000918) #29	ENSCAFG00020000931 #30	KIF26B (ENSCAFG00020000955)	ENSCAFG00020001053 #31	TFB2M (ENSCAFG00020001084) #32	CNST (ENSCAFG00020001096) #34	SCCPDH (ENSCAFG00020001113) #35	ENSCAFG00020001153	ENSCAFG00020001167	AHCTF1 (ENSCAFG00020001201) #36
Red fox	MODERN SPECIES	45	ENSVVUG00000026384	ENSVVUG00000026387	GREM2 (ENSVVUG00000026390)	RGS7 (ENSVVUG00000026398)	FH (ENSVVUG00000026414)	KMO (ENSVVUG00000026416) #7	OPN3 (ENSVVUG00000026420) #8	WDR64 (ENSVVUG00000026426) #9	ENSVVUG00000026430	EXO1 (ENSVVUG00000026435) #10	MAP1LC3C (ENSVVUG00000026440) #12	PLD5 (ENSVVUG00000026443) #14	CEP170 (ENSVVUG00000026459) #16	SDCCAG8 (ENSVVUG00000026484) #17	AKT3 (ENSVVUG00000026493) #18	ZBTB18 (ENSVVUG00000026495) #22	ENSVVUG00000026500	C1orf100 (ENSVVUG00000026502) #23	ADSS (ENSVVUG00000026505) #24	CATSPERE (ENSVVUG00000026515) #25	DESI2 (ENSVVUG00000026519) #27	COX20 (ENSVVUG00000026522) #28	HNRNPU (ENSVVUG00000026524) #29	EFCAB2 (ENSVVUG00000026538) #30	KIF26B (ENSVVUG00000000074)	ENSVVUG00000000542 #31	ENSVVUG00000000650 #32	CNST (ENSVVUG00000000780) #34	SCCPDH (ENSVVUG00000000879) #35	AHCTF1 (ENSVVUG00000000955) #36	CDC42BPA (ENSVVUG00000001137)
Caniformia_b	ANCESTRAL SPECIES	8	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.d #12	ENSGT00390000008164.d #11	ENSGT00940000161852.c #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Ursidae	ANCESTRAL SPECIES	4	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.d #12	ENSGT00390000008164.d #11	ENSGT00940000161852.c #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000161606.d	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Ursus	ANCESTRAL SPECIES	90	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.d #12	ENSGT00390000008164.d #11	ENSGT00940000161852.c #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000161606.d	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158.z #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b	ENSGT00940000156810
American black bear	MODERN SPECIES	1563																ZBTB18 (ENSUAMG00000027701) #22
Polar bear	MODERN SPECIES	99	RGS7 (ENSUMAG00000011615)	FH (ENSUMAG00000011655)	KMO (ENSUMAG00000011665) #7	ENSUMAG00000011682 #8	ENSUMAG00000011686	ENSUMAG00000011692 #9	ENSUMAG00000011733 #9	EXO1 (ENSUMAG00000011743) #10	ENSUMAG00000011753 #12	BECN2 (ENSUMAG00000011758) #11	ENSUMAG00000011763 #12	PLD5 (ENSUMAG00000011776) #14	CEP170 (ENSUMAG00000011791) #16	SDCCAG8 (ENSUMAG00000011811) #17	AKT3 (ENSUMAG00000011832) #18	ZBTB18 (ENSUMAG00000011860) #22	C1orf100 (ENSUMAG00000011873) #23	ADSS2 (ENSUMAG00000011932) #24	ENSUMAG00000012197 #25	DESI2 (ENSUMAG00000012207) #27	ENSUMAG00000012218 #28	HNRNPU (ENSUMAG00000012322) #29	EFCAB2 (ENSUMAG00000013304) #30	ENSUMAG00000013317 #31	ENSUMAG00000013322	TFB2M (ENSUMAG00000013324) #32	ENSUMAG00000013325	SCCPDH (ENSUMAG00000013328) #35	ENSUMAG00000013333	AHCTF1 (ENSUMAG00000013411) #36	CDC42BPA (ENSUMAG00000014320)
Giant Panda	MODERN SPECIES	18	GREM2 (ENSAMEG00000030827)	RGS7 (ENSAMEG00000014028)	FH (ENSAMEG00000013995)	KMO (ENSAMEG00000013965) #7	OPN3 (ENSAMEG00000013961) #8	WDR64 (ENSAMEG00000013942) #9	EXO1 (ENSAMEG00000013934) #10	ENSAMEG00000013927 #12	BECN2 (ENSAMEG00000018816) #11	ENSAMEG00000013919 #12	PLD5 (ENSAMEG00000013913) #14	CEP170 (ENSAMEG00000018213) #16	ENSAMEG00000024848	SDCCAG8 (ENSAMEG00000009331) #17	AKT3 (ENSAMEG00000009273) #18	ZBTB18 (ENSAMEG00000019750) #22	C1orf100 (ENSAMEG00000009269) #23	ADSS2 (ENSAMEG00000009234) #24	CATSPERE (ENSAMEG00000009228) #25	DESI2 (ENSAMEG00000027766) #27	COX20 (ENSAMEG00000026571) #28	HNRNPU (ENSAMEG00000009145) #29	EFCAB2 (ENSAMEG00000009139) #30	KIF26B (ENSAMEG00000009119)	SMYD3 (ENSAMEG00000006619) #31	TFB2M (ENSAMEG00000006593) #32	CNST (ENSAMEG00000006589) #34	SCCPDH (ENSAMEG00000006562) #35	ENSAMEG00000029183	ENSAMEG00000006501 #36	ENSAMEG00000008890
Mustelinae	ANCESTRAL SPECIES	88	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661.l	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852.c #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
American mink	MODERN SPECIES	43		GREM2 (ENSNVIG00000001817)	ENSNVIG00000001835	FH (ENSNVIG00000002008)	KMO (ENSNVIG00000002024) #7	ENSNVIG00000002073 #8	CHML (ENSNVIG00000002080)	WDR64 (ENSNVIG00000002088) #9	EXO1 (ENSNVIG00000002104) #10	BECN2 (ENSNVIG00000002160) #11	MAP1LC3C (ENSNVIG00000002161) #12	PLD5 (ENSNVIG00000002170) #14	CEP170 (ENSNVIG00000002232) #16	SDCCAG8 (ENSNVIG00000002442) #17	AKT3 (ENSNVIG00000002948) #18	ZBTB18 (ENSNVIG00000002964) #22	C1orf100 (ENSNVIG00000002977) #23	ADSS2 (ENSNVIG00000003006) #24	CATSPERE (ENSNVIG00000003022) #25	DESI2 (ENSNVIG00000003153) #27	COX20 (ENSNVIG00000003195) #28	HNRNPU (ENSNVIG00000003228) #29	EFCAB2 (ENSNVIG00000003367) #30	KIF26B (ENSNVIG00000003416)	SMYD3 (ENSNVIG00000003474) #31	TFB2M (ENSNVIG00000003533) #32	CNST (ENSNVIG00000003578) #34	SCCPDH (ENSNVIG00000003629) #35	ENSNVIG00000003647	AHCTF1 (ENSNVIG00000003655) #36	CDC42BPA (ENSNVIG00000003776)
Ferret	MODERN SPECIES	217	ENSMPUG00000015693	RGS7 (ENSMPUG00000015695)	FH (ENSMPUG00000015697)	KMO (ENSMPUG00000015699) #7	OPN3 (ENSMPUG00000015703) #8	WDR64 (ENSMPUG00000015708) #9	EXO1 (ENSMPUG00000015709) #10	BECN2 (ENSMPUG00000015713) #11	MAP1LC3C (ENSMPUG00000015717) #12	PLD5 (ENSMPUG00000015720) #14	ENSMPUG00000015721	ENSMPUG00000015722	CEP170 (ENSMPUG00000015723) #16	SDCCAG8 (ENSMPUG00000015725) #17	AKT3 (ENSMPUG00000015730) #18	ZBTB18 (ENSMPUG00000015734) #22	C1orf100 (ENSMPUG00000015737) #23	ADSS2 (ENSMPUG00000015741) #24	CATSPERE (ENSMPUG00000015745) #25	DESI2 (ENSMPUG00000015748) #27	ENSMPUG00000015750 #28	HNRNPU (ENSMPUG00000015752) #29	EFCAB2 (ENSMPUG00000015784) #30	KIF26B (ENSMPUG00000015788)	SMYD3 (ENSMPUG00000015806) #31	ENSMPUG00000015808 #31	TFB2M (ENSMPUG00000015810) #32	CNST (ENSMPUG00000015813) #34	SCCPDH (ENSMPUG00000015815) #35	ENSMPUG00000015817	ENSMPUG00000015818
Felidae	ANCESTRAL SPECIES	11	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.d.a #12	ENSGT00390000008164.d #11	ENSGT00940000161852.c #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.b	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Panthera	ANCESTRAL SPECIES	19	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.d.a #12	ENSGT00390000008164.d #11	ENSGT00940000161852.c #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.b	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Panthera_a	ANCESTRAL SPECIES	19	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.d.a #12	ENSGT00390000008164.d #11	ENSGT00940000161852.c #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019.b	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
leopard	MODERN SPECIES	4	FMN2 (ENSPPRG00000007138)	GREM2 (ENSPPRG00000018431)	ENSPPRG00000009269	RGS7 (ENSPPRG00000011889)	FH (ENSPPRG00000012319)	KMO (ENSPPRG00000015898) #7	OPN3 (ENSPPRG00000016394) #8	WDR64 (ENSPPRG00000000202) #9	EXO1 (ENSPPRG00000002261) #10	ENSPPRG00000002695 #12	ENSPPRG00000003284 #12	PLD5 (ENSPPRG00000004006) #14	CEP170 (ENSPPRG00000005786) #16	SDCCAG8 (ENSPPRG00000006575) #17	AKT3 (ENSPPRG00000008984) #18	ZBTB18 (ENSPPRG00000009151) #22	C1orf100 (ENSPPRG00000009331) #23	ADSS2 (ENSPPRG00000009968) #24	CATSPERE (ENSPPRG00000013157) #25	DESI2 (ENSPPRG00000015454) #27	ENSPPRG00000016002 #28	HNRNPU (ENSPPRG00000002662) #29	EFCAB2 (ENSPPRG00000003970) #30	ENSPPRG00000005048	KIF26B (ENSPPRG00000005611)	SMYD3 (ENSPPRG00000007149) #31	TFB2M (ENSPPRG00000007350) #32	CNST (ENSPPRG00000008188) #34	SCCPDH (ENSPPRG00000008599) #35	ENSPPRG00000009605	CDC42BPA (ENSPPRG00000024128)
lion	MODERN SPECIES	17	GREM2 (ENSPLOG00000010441)	ENSPLOG00000010413	RGS7 (ENSPLOG00000010068)	FH (ENSPLOG00000009935)	KMO (ENSPLOG00000009633) #7	OPN3 (ENSPLOG00000009576) #8	WDR64 (ENSPLOG00000009316) #9	EXO1 (ENSPLOG00000009218) #10	ENSPLOG00000009175 #12	BECN2 (ENSPLOG00000009097) #11	ENSPLOG00000009034 #12	PLD5 (ENSPLOG00000008930) #14	CEP170 (ENSPLOG00000008822) #16	SDCCAG8 (ENSPLOG00000008743) #17	AKT3 (ENSPLOG00000008604) #18	ZBTB18 (ENSPLOG00000008563) #22	C1orf100 (ENSPLOG00000008471) #23	ADSS2 (ENSPLOG00000008393) #24	CATSPERE (ENSPLOG00000008156) #25	DESI2 (ENSPLOG00000008117) #27	ENSPLOG00000008076 #28	HNRNPU (ENSPLOG00000007884) #29	EFCAB2 (ENSPLOG00000007794) #30	KIF26B (ENSPLOG00000007502)	SMYD3 (ENSPLOG00000007373) #31	TFB2M (ENSPLOG00000007355) #32	CNST (ENSPLOG00000007297) #34	SCCPDH (ENSPLOG00000007254) #35	ENSPLOG00000007118	AHCTF1 (ENSPLOG00000006807) #36	CDC42BPA (ENSPLOG00000006680)
Tiger	MODERN SPECIES	95	TADA1 (ENSPTIG00000008050)	POGK (ENSPTIG00000005898)	ENSPTIG00000020273	GREM2 (ENSPTIG00000019773)	RGS7 (ENSPTIG00000014826)	FH (ENSPTIG00000012588)	KMO (ENSPTIG00000007560) #7	OPN3 (ENSPTIG00000007030) #8	WDR64 (ENSPTIG00000018586) #9	EXO1 (ENSPTIG00000015769) #10	MAP1LC3C (ENSPTIG00000015165) #12	PLD5 (ENSPTIG00000013519) #14	CEP170 (ENSPTIG00000011961) #16	SDCCAG8 (ENSPTIG00000008829) #17	AKT3 (ENSPTIG00000021068) #18	ZBTB18 (ENSPTIG00000020181) #22	C1orf100 (ENSPTIG00000019529) #23	ADSS2 (ENSPTIG00000018415) #24	CATSPERE (ENSPTIG00000013424) #25	DESI2 (ENSPTIG00000011692) #27	COX20 (ENSPTIG00000011303) #28	HNRNPU (ENSPTIG00000020150) #29	EFCAB2 (ENSPTIG00000019824) #30	ENSPTIG00000018837	KIF26B (ENSPTIG00000017769)	SMYD3 (ENSPTIG00000017118) #31
Cat	MODERN SPECIES	248	RGS7 (ENSFCAG00000001325)	FH (ENSFCAG00000005490)	KMO (ENSFCAG00000004150) #7	OPN3 (ENSFCAG00000034971) #8	WDR64 (ENSFCAG00000013338) #9	EXO1 (ENSFCAG00000013339) #10	ENSFCAG00000036292 #12	ENSFCAG00000013340 #11	ENSFCAG00000040996 #12	ENSFCAG00000052716	ENSFCAG00000051650	PLD5 (ENSFCAG00000009424) #14	CEP170 (ENSFCAG00000026540) #16	SDCCAG8 (ENSFCAG00000038761) #17	AKT3 (ENSFCAG00000003700) #18	ZBTB18 (ENSFCAG00000043987) #22	C1orf100 (ENSFCAG00000041166) #23	ADSS2 (ENSFCAG00000025698) #24	CATSPERE (ENSFCAG00000042283) #25	DESI2 (ENSFCAG00000026628) #27	ENSFCAG00000049403	COX20 (ENSFCAG00000036373) #28	HNRNPU (ENSFCAG00000002156) #29	EFCAB2 (ENSFCAG00000029971) #30	KIF26B (ENSFCAG00000022128)	SMYD3 (ENSFCAG00000038120) #31	TFB2M (ENSFCAG00000021951) #32	CNST (ENSFCAG00000028075) #34	SCCPDH (ENSFCAG00000010642) #35	ENSFCAG00000024485	AHCTF1 (ENSFCAG00000014392) #36
Laurasiatheria_c	ANCESTRAL SPECIES	25	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Equus	ANCESTRAL SPECIES	41	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.f #12	ENSGT00390000008164.d #11	ENSGT00940000161852.e #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29
Donkey	MODERN SPECIES	23	RGS7 (ENSEASG00005003257)	FH (ENSEASG00005003252)	KMO (ENSEASG00005003187) #7	OPN3 (ENSEASG00005003173) #8	CHML (ENSEASG00005037865)	WDR64 (ENSEASG00005003164) #9	EXO1 (ENSEASG00005003159) #10	BECN2 (ENSEASG00005003154) #11	ENSEASG00005030566 #12	PLD5 (ENSEASG00005003142) #14	ENSEASG00005035739	ENSEASG00005003123 #16	ENSEASG00005026305 #16	SDCCAG8 (ENSEASG00005003097) #17	AKT3 (ENSEASG00005003090) #18	ZBTB18 (ENSEASG00005030332) #22	C1orf100 (ENSEASG00005026609) #23	ADSS2 (ENSEASG00005003054) #24	CATSPERE (ENSEASG00005036663) #25	DESI2 (ENSEASG00005003022) #27	COX20 (ENSEASG00005024069) #28	ENSEASG00005003017 #29
Horse	MODERN SPECIES	23	FH (ENSECAG00000020726)	KMO (ENSECAG00000015341) #7	CHML (ENSECAG00000049917)	OPN3 (ENSECAG00000014947) #8	WDR64 (ENSECAG00000007512) #9	EXO1 (ENSECAG00000018322) #10	ENSECAG00000047917 #12	BECN2 (ENSECAG00000017996) #11	ENSECAG00000037253 #12	PLD5 (ENSECAG00000015845) #14	ENSECAG00000052988	ENSECAG00000049767	CEP170 (ENSECAG00000012163) #16	SDCCAG8 (ENSECAG00000008477) #17	AKT3 (ENSECAG00000019722) #18	ZBTB18 (ENSECAG00000033381) #22	C30H1orf100 (ENSECAG00000016894) #23	ADSS2 (ENSECAG00000010744) #24	ENSECAG00000041634	ENSECAG00000056420	CATSPERE (ENSECAG00000008228) #25	DESI2 (ENSECAG00000008142) #27	COX20 (ENSECAG00000008125) #28	HNRNPU (ENSECAG00000007955) #29	ENSECAG00000052008
Chiroptera	ANCESTRAL SPECIES	30	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000178689	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Megabat	MODERN SPECIES	6556																ZBTB18 (ENSPVAG00000011441) #22
Microchiroptera	ANCESTRAL SPECIES	32	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000178689	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Greater horseshoe bat	MODERN SPECIES	19	CHRM3 (ENSRFEG00010020303)	ENSRFEG00010020281	ENSRFEG00010020220	GREM2 (ENSRFEG00010020207)	RGS7 (ENSRFEG00010019674)	FH (ENSRFEG00010019556)	KMO (ENSRFEG00010019488) #7	OPN3 (ENSRFEG00010019426) #8	WDR64 (ENSRFEG00010019065) #9	EXO1 (ENSRFEG00010018853) #10	BECN2 (ENSRFEG00010018835) #11	MAP1LC3C (ENSRFEG00010018764) #12	PLD5 (ENSRFEG00010018644) #14	CEP170 (ENSRFEG00010018444) #16	SDCCAG8 (ENSRFEG00010018345) #17	ENSRFEG00010018172 #22	C1orf100 (ENSRFEG00010018065) #23	ADSS2 (ENSRFEG00010018012) #24	ENSRFEG00010018000	CATSPERE (ENSRFEG00010017401) #25	DESI2 (ENSRFEG00010017267) #27	COX20 (ENSRFEG00010017225) #28	HNRNPU (ENSRFEG00010016043) #29	EFCAB2 (ENSRFEG00010015981) #30	KIF26B (ENSRFEG00010015778)	SMYD3 (ENSRFEG00010015677) #31	TFB2M (ENSRFEG00010015650) #32	CNST (ENSRFEG00010015524) #34	SCCPDH (ENSRFEG00010015433) #35	ENSRFEG00010015342	AHCTF1 (ENSRFEG00010015223) #36
Microbat	MODERN SPECIES	1510																ZBTB18 (ENSMLUG00000011285) #22	C1orf100 (ENSMLUG00000002740) #23	ADSS2 (ENSMLUG00000017320) #24
Atlantogenata	ANCESTRAL SPECIES	44	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00950000182994.A.n.b	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b	ENSGT00940000156810
Afrotheria	ANCESTRAL SPECIES	47	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36	ENSGT01030000234517.H.b	ENSGT00940000156810
Afrotheria_a	ANCESTRAL SPECIES	48	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00390000008164.d #11	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b.`b #16	ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36	ENSGT01030000234517.H.b	ENSGT00940000156810
Elephant	MODERN SPECIES	126	GREM2 (ENSLAFG00000031925)	RGS7 (ENSLAFG00000009882)	FH (ENSLAFG00000005727)	KMO (ENSLAFG00000009991) #7	OPN3 (ENSLAFG00000009994) #8	WDR64 (ENSLAFG00000009998) #9	EXO1 (ENSLAFG00000001542) #10	ENSLAFG00000030313 #12	BECN2 (ENSLAFG00000001543) #11	ENSLAFG00000015922 #12	PLD5 (ENSLAFG00000015925) #14	ENSLAFG00000012274	CEP170 (ENSLAFG00000004889) #16	ENSLAFG00000016926 #17	AKT3 (ENSLAFG00000016937) #18	ZBTB18 (ENSLAFG00000002879) #22	C1orf100 (ENSLAFG00000025946) #23	ENSLAFG00000002097 #24	CATSPERE (ENSLAFG00000015299) #25	DESI2 (ENSLAFG00000005264) #27	HNRNPU (ENSLAFG00000021377) #29	EFCAB2 (ENSLAFG00000004376) #30	KIF26B (ENSLAFG00000016491)	ENSLAFG00000027832	ENSLAFG00000009695 #31	TFB2M (ENSLAFG00000015061) #32	CNST (ENSLAFG00000016089) #34	SCCPDH (ENSLAFG00000001357) #35	AHCTF1 (ENSLAFG00000009243) #36	CDC42BPA (ENSLAFG00000002527)	COQ8A (ENSLAFG00000002525)
Xenarthra	ANCESTRAL SPECIES	397														ENSGT00730000111198 #17	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00410000028378	ENSGT00940000156546 #29	ENSGT00940000160590 #30
Armadillo	MODERN SPECIES	626														SDCCAG8 (ENSDNOG00000016334) #17	AKT3 (ENSDNOG00000016337) #18	ZBTB18 (ENSDNOG00000009334) #22	C1orf100 (ENSDNOG00000007513) #23	ADSS2 (ENSDNOG00000004228) #24	ENSDNOG00000003459 #25	DESI2 (ENSDNOG00000043692) #27	ENSDNOG00000044183	HNRNPU (ENSDNOG00000000215) #29	EFCAB2 (ENSDNOG00000032002) #30
Marsupialia	ANCESTRAL SPECIES	3	ENSGT00940000154289.B	ENSGT01030000235112	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00910000148060	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Opossum	MODERN SPECIES	1	RGS7 (ENSMODG00000007084)	ENSMODG00000007027	FH (ENSMODG00000007014)	KMO (ENSMODG00000006989) #7	OPN3 (ENSMODG00000006943) #8	WDR64 (ENSMODG00000006929) #9	EXO1 (ENSMODG00000006877) #10	MAP1LC3C (ENSMODG00000006842) #12	PLD5 (ENSMODG00000006817) #14	ENSMODG00000006765	ENSMODG00000051185	CEP170 (ENSMODG00000006701) #16	ENSMODG00000006642	AKT3 (ENSMODG00000006626) #18	ENSMODG00000041193	ZBTB18 (ENSMODG00000006570) #22	ENSMODG00000006566 #23	ENSMODG00000006559 #24	ENSMODG00000041647	ENSMODG00000024668 #25	DESI2 (ENSMODG00000006533) #27	COX20 (ENSMODG00000024669) #28	HNRNPU (ENSMODG00000006515) #29	ENSMODG00000041630 #30	KIF26B (ENSMODG00000006420)	ENSMODG00000006404 #31	ENSMODG00000040525	ENSMODG00000038289 #32	ENSMODG00000043627	CNST (ENSMODG00000006372) #34	SCCPDH (ENSMODG00000006356) #35
Marsupialia_b	ANCESTRAL SPECIES	6	ENSGT00940000154289.B	ENSGT01030000235112	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b
Diprotodontia	ANCESTRAL SPECIES	7	ENSGT00940000154289.B	ENSGT01030000235112	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b	ENSGT00940000156810
Diprotodontia_a	ANCESTRAL SPECIES	3	ENSGT00940000154289.B	ENSGT01030000235112	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00950000183122.A	ENSGT00390000000747 #7	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852 #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766 #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT01030000234517.H.b	ENSGT00940000156810
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1035	ENSVURG00010015237	ENSVURG00010015242	ENSVURG00010015280	ENSVURG00010015445	ENSVURG00010015455 #7	ENSVURG00010015474 #8	ENSVURG00010015486 #8	ENSVURG00010015501 #9	ENSVURG00010015550 #10	ENSVURG00010015571 #12	ENSVURG00010015591 #14	ENSVURG00010015620 #16	ENSVURG00010015668	ENSVURG00010015704	ENSVURG00010015721 #18	ENSVURG00010015741 #22	ENSVURG00010015758 #24	ENSVURG00010015784 #27	ENSVURG00010015810 #28	ENSVURG00010015813 #29	ENSVURG00010015829 #30	ENSVURG00010015854	ENSVURG00010015887	ENSVURG00010015901	ENSVURG00010015915 #32	ENSVURG00010015925 #34	ENSVURG00010015938 #35	ENSVURG00010015965 #36	ENSVURG00010016001	ENSVURG00010016076	ENSVURG00010016090
Common wonbat	MODERN SPECIES	1035	ENSVURG00010007108	ENSVURG00010007131	ENSVURG00010007138	ENSVURG00010007185	ENSVURG00010007331	ENSVURG00010007345 #7	ENSVURG00010007372 #8	ENSVURG00010007423 #9	ENSVURG00010007516 #10	ENSVURG00010007529 #12	ENSVURG00010007551 #14	ENSVURG00010007584 #16	ENSVURG00010007635	ENSVURG00010007701	ENSVURG00010007733 #18	ENSVURG00010007765 #22	ENSVURG00010007786 #24	ENSVURG00010007837 #27	ENSVURG00010007884	ENSVURG00010007891 #28	ENSVURG00010007907 #29	ENSVURG00010008004 #30	ENSVURG00010008115	ENSVURG00010008148 #31	ENSVURG00010008261	ENSVURG00010008263	ENSVURG00010008267	ENSVURG00010008296	ENSVURG00010008362 #32	ENSVURG00010008373 #34	ENSVURG00010008421 #35
koala	MODERN SPECIES	12	CHRM3 (ENSPCIG00000000352)	ENSPCIG00000035163	ENSPCIG00000030768	GREM2 (ENSPCIG00000030902)	RGS7 (ENSPCIG00000003865)	FH (ENSPCIG00000000056)	KMO (ENSPCIG00000000055) #7	OPN3 (ENSPCIG00000000054) #8	WDR64 (ENSPCIG00000000053) #9	EXO1 (ENSPCIG00000000052) #10	PLD5 (ENSPCIG00000000048) #14	ENSPCIG00000022932 #16	ENSPCIG00000037006 #16	ENSPCIG00000006946	AKT3 (ENSPCIG00000006957) #18	ZBTB18 (ENSPCIG00000006967) #22	ENSPCIG00000017077 #23	ENSPCIG00000017075	ADSS2 (ENSPCIG00000017074) #24	ENSPCIG00000032232 #25	DESI2 (ENSPCIG00000008632) #27	ENSPCIG00000035729	COX20 (ENSPCIG00000035475) #28	HNRNPU (ENSPCIG00000008657) #29	EFCAB2 (ENSPCIG00000013082) #30	KIF26B (ENSPCIG00000016690)	ENSPCIG00000003253 #31	ENSPCIG00000003263	ENSPCIG00000003268 #32	CNST (ENSPCIG00000003285) #34	SCCPDH (ENSPCIG00000003299) #35
Wallaby	MODERN SPECIES	11532																ZBTB18 (ENSMEUG00000009369) #22
Tasmanian devil	MODERN SPECIES	3	FMN2 (ENSSHAG00000020854)	ENSSHAG00000024333	GREM2 (ENSSHAG00000012022)	RGS7 (ENSSHAG00000008644)	ENSSHAG00000029198	FH (ENSSHAG00000012494)	KMO (ENSSHAG00000012201) #7	OPN3 (ENSSHAG00000030261) #8	WDR64 (ENSSHAG00000010684) #9	EXO1 (ENSSHAG00000010165) #10	MAP1LC3C (ENSSHAG00000027962) #12	PLD5 (ENSSHAG00000008868) #14	CEP170 (ENSSHAG00000014838) #16	ENSSHAG00000013573	AKT3 (ENSSHAG00000012342) #18	ZBTB18 (ENSSHAG00000025944) #22	ENSSHAG00000022540	ENSSHAG00000002954 #23	ADSS2 (ENSSHAG00000000865) #24	ENSSHAG00000004405 #25	ENSSHAG00000032055 #25	DESI2 (ENSSHAG00000023757) #27	COX20 (ENSSHAG00000027143) #28	HNRNPU (ENSSHAG00000025408) #29	EFCAB2 (ENSSHAG00000028679) #30	KIF26B (ENSSHAG00000015160)	ENSSHAG00000030450 #31	ENSSHAG00000010044 #32	CNST (ENSSHAG00000009416) #34	SCCPDH (ENSSHAG00000023977) #35	ENSSHAG00000007631 #36
Platypus	MODERN SPECIES	10	CHRM3 (ENSOANG00000041832)	ENSOANG00000042159	ENSOANG00000045178	GREM2 (ENSOANG00000010275)	RGS7 (ENSOANG00000010274)	ENSOANG00000010273	PIGM (ENSOANG00000040171)	FH (ENSOANG00000010272)	KMO (ENSOANG00000010271) #7	WDR64 (ENSOANG00000010268) #9	EXO1 (ENSOANG00000043018) #10	ENSOANG00000039486 #14	CEP170 (ENSOANG00000010265) #16	ENSOANG00000010263	AKT3 (ENSOANG00000010258) #18	ZBTB18 (ENSOANG00000047323) #22	ENSOANG00000010256 #23	ADSS2 (ENSOANG00000010254) #24	DESI2 (ENSOANG00000036528) #27	COX20 (ENSOANG00000049445) #28	HNRNPU (ENSOANG00000010249) #29	ENSOANG00000049283 #30	KIF26B (ENSOANG00000010247)	SMYD3 (ENSOANG00000019760) #31	ENSOANG00000041467 #32	CNST (ENSOANG00000010245) #34	SCCPDH (ENSOANG00000010244) #35	AHCTF1 (ENSOANG00000010242) #36	CDC42BPA (ENSOANG00000010240)	COQ8A (ENSOANG00000010237)	PSEN2 (ENSOANG00000010238)
Sauria	ANCESTRAL SPECIES	1	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766.s #31	ENSGT00940000156766.t #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Lepidosauria	ANCESTRAL SPECIES		ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT01000000216868	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766.s #31	ENSGT00940000156766.t #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Episquamata	ANCESTRAL SPECIES		ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT01000000216868	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766.s #31	ENSGT00940000156766.t #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Laterata	ANCESTRAL SPECIES	4	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT01000000216868	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766.t #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT00950000182886.b.a
Common wall lizard	MODERN SPECIES	11	RYR2 (ENSPMRG00000005166)	ENSPMRG00000005950	CHRM3 (ENSPMRG00000005958)	FMN2 (ENSPMRG00000005976)	GREM2 (ENSPMRG00000006041)	RGS7 (ENSPMRG00000006063)	OPN3 (ENSPMRG00000006099) #8	WDR64 (ENSPMRG00000006118) #9	EXO1 (ENSPMRG00000006169) #10	ENSPMRG00000006221	MAP1LC3C (ENSPMRG00000006225) #12	PLD5 (ENSPMRG00000006234) #14	CEP170 (ENSPMRG00000006264) #16	ENSPMRG00000006307	AKT3 (ENSPMRG00000006354) #18	ZBTB18 (ENSPMRG00000006392) #22	ENSPMRG00000006400	ADSS2 (ENSPMRG00000006407) #24	CATSPERE (ENSPMRG00000006426) #25	DESI2 (ENSPMRG00000006448) #27	COX20 (ENSPMRG00000006456) #28	ENSPMRG00000006472 #29	ENSPMRG00000006489	ENSPMRG00000006500 #30	KIF26B (ENSPMRG00000006520)	ENSPMRG00000006536 #30	ENSPMRG00000006562 #29	ENSPMRG00000006577	ENSPMRG00000006584 #31	ENSPMRG00000006597 #31	TFB2M (ENSPMRG00000006607) #32
Argentine black and white tegu	MODERN SPECIES	2	ENSSMRG00000010277	CHRM3 (ENSSMRG00000010271)	FMN2 (ENSSMRG00000010270)	GREM2 (ENSSMRG00000010254)	RGS7 (ENSSMRG00000010248)	PIGM (ENSSMRG00000010223)	OPN3 (ENSSMRG00000010202) #8	ENSSMRG00000010201	WDR64 (ENSSMRG00000010200) #9	EXO1 (ENSSMRG00000010199) #10	MAP1LC3C (ENSSMRG00000010184) #12	PLD5 (ENSSMRG00000010182) #14	CEP170 (ENSSMRG00000010175) #16	ENSSMRG00000010174	AKT3 (ENSSMRG00000010166) #18	ZBTB18 (ENSSMRG00000010157) #22	ENSSMRG00000010156	ADSS2 (ENSSMRG00000010155) #24	DESI2 (ENSSMRG00000010150) #27	ENSSMRG00000010148	HNRNPU (ENSSMRG00000010145) #29	ENSSMRG00000010143	ENSSMRG00000010142 #30	KIF26B (ENSSMRG00000010140)	ENSSMRG00000010103 #31	ENSSMRG00000010087	ENSSMRG00000010081 #31	TFB2M (ENSSMRG00000010075) #32	CNST (ENSSMRG00000010073) #34	SCCPDH (ENSSMRG00000010070) #35	ENSSMRG00000010069
Toxicofera	ANCESTRAL SPECIES		ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766.s #31	ENSGT00940000156766.t #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Elapidae	ANCESTRAL SPECIES		ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00940000168267	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766.s #31	ENSGT00940000156766.t #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Elapidae_a	ANCESTRAL SPECIES	2	ENSGT00940000153968.a.b.a.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #24	ENSGT00730000111005 #27	ENSGT00940000168267	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766.s #31	ENSGT00940000156766.t #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT00950000182886.b.a
Acanthophiinae	ANCESTRAL SPECIES	3	ENSGT00940000153968.a.b.a.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #24	ENSGT00730000111005 #27	ENSGT00940000168267	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766.s #31	ENSGT00940000156766.t #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT00950000182886.b.a
Eastern brown snake	MODERN SPECIES	26	RYR2 (ENSPTXG00000002954)	CHRM3 (ENSPTXG00000002975)	ENSPTXG00000002977	GREM2 (ENSPTXG00000002980)	ENSPTXG00000002982	RGS7 (ENSPTXG00000002983)	OPN3 (ENSPTXG00000002985) #8	WDR64 (ENSPTXG00000002995) #9	EXO1 (ENSPTXG00000003000) #10	MAP1LC3C (ENSPTXG00000003012) #12	ENSPTXG00000003014 #14	ENSPTXG00000003018 #14	CEP170 (ENSPTXG00000003025) #16	ENSPTXG00000003069	AKT3 (ENSPTXG00000003071) #18	ZBTB18 (ENSPTXG00000003072) #22	ADSS2 (ENSPTXG00000003073) #24
Mainland tiger snake	MODERN SPECIES	28	ENSNSUG00000016890	GREM2 (ENSNSUG00000016889)	RGS7 (ENSNSUG00000016888)	OPN3 (ENSNSUG00000016887) #8	ENSNSUG00000016886 #9	ENSNSUG00000016885 #9	EXO1 (ENSNSUG00000016884) #10	MAP1LC3C (ENSNSUG00000016883) #12	ENSNSUG00000016882 #14	ENSNSUG00000016880 #14	ENSNSUG00000016879 #16	ENSNSUG00000016878 #16	ENSNSUG00000016877 #16	ENSNSUG00000016876	AKT3 (ENSNSUG00000016762) #18	ZBTB18 (ENSNSUG00000016761) #22	ADSS2 (ENSNSUG00000016760) #24	DESI2 (ENSNSUG00000016758) #27	ENSNSUG00000016757	HNRNPU (ENSNSUG00000016756) #29	EFCAB2 (ENSNSUG00000016755) #30	ENSNSUG00000016754	KIF26B (ENSNSUG00000016753)	ENSNSUG00000016752	ENSNSUG00000016751 #31	TFB2M (ENSNSUG00000016750) #32	CNST (ENSNSUG00000016673) #34	SCCPDH (ENSNSUG00000016671) #35	ENSNSUG00000016670	AHCTF1 (ENSNSUG00000016669) #36	SRD5A2 (ENSNSUG00000016668)
Blue-lipped sea krait	MODERN SPECIES	3330																ZBTB18 (ENSLLTG00000006609) #22
Indian cobra	MODERN SPECIES		ENSNNAG00000001564	ENSNNAG00000001549	ENSNNAG00000001538	GREM2 (ENSNNAG00000001521)	RGS7 (ENSNNAG00000001452)	OPN3 (ENSNNAG00000001411) #8	WDR64 (ENSNNAG00000001381) #9	EXO1 (ENSNNAG00000001347) #10	MAP1LC3C (ENSNNAG00000001315) #12	ENSNNAG00000001300 #14	ENSNNAG00000001291 #14	ENSNNAG00000001285 #14	CEP170 (ENSNNAG00000001186) #16	ENSNNAG00000001076	AKT3 (ENSNNAG00000001025) #18	ZBTB18 (ENSNNAG00000001001) #22	ADSS2 (ENSNNAG00000000962) #24	CATSPERE (ENSNNAG00000000905) #25	DESI2 (ENSNNAG00000000863) #27	HNRNPU (ENSNNAG00000000843) #29	EFCAB2 (ENSNNAG00000000820) #30	ENSNNAG00000000799	KIF26B (ENSNNAG00000000789)	ENSNNAG00000000776 #31	TFB2M (ENSNNAG00000000762) #32	CNST (ENSNNAG00000000744) #34	SCCPDH (ENSNNAG00000000723) #35	ENSNNAG00000000689	AHCTF1 (ENSNNAG00000000655) #36	SRD5A2 (ENSNNAG00000000638)	MEMO1 (ENSNNAG00000000623)
Lizard	MODERN SPECIES	899									ENSACAG00000040328	ENSACAG00000005222 #16	ENSACAG00000041458	ENSACAG00000039879 #16	ENSACAG00000006805	AKT3 (ENSACAG00000006720) #18	ENSACAG00000034668	ZBTB18 (ENSACAG00000004296) #22	ENSACAG00000039475	ENSACAG00000043662	ENSACAG00000039315	ADSS2 (ENSACAG00000004299) #24	DESI2 (ENSACAG00000004473) #27	COX20 (ENSACAG00000043840) #28	HNRNPU (ENSACAG00000004511) #29	ENSACAG00000037868 #29	EFCAB2 (ENSACAG00000040747) #30	ENSACAG00000043643	KIF26B (ENSACAG00000011771)	ENSACAG00000045590
tuatara	MODERN SPECIES	1838											ENSSPUG00000013417 #16	ENSSPUG00000013423 #16	ENSSPUG00000013431 #16	ENSSPUG00000013443	AKT3 (ENSSPUG00000013463) #18	ZBTB18 (ENSSPUG00000013479) #22
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT01100000263477.B	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766.s #31	ENSGT00940000156766.t #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT01100000263477.B	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766.s #31	ENSGT00940000156766.t #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Aves	ANCESTRAL SPECIES	12	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766.s #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36
Neognathae	ANCESTRAL SPECIES	2	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00960000189749	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00960000189424	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766.s.b.a #31	ENSGT00940000156766.s.b.b #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00960000189749	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00960000189424	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766.s.b.a #31	ENSGT00940000156766.s.b.b #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Anatidae	ANCESTRAL SPECIES	11	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000017364 #23	ENSGT00390000015553.a.a.b #24	ENSGT00730000111005 #27	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766.s.b.a #31	ENSGT00940000156766.s.b.b #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT00950000182886.b.a
Pink-footed goose	MODERN SPECIES	53	ENSABRG00000021176	CHRM3 (ENSABRG00000021192)	FMN2 (ENSABRG00000021205)	GREM2 (ENSABRG00000021226)	RGS7 (ENSABRG00000021241)	PIGM (ENSABRG00000021275)	OPN3 (ENSABRG00000021276) #8	ENSABRG00000021279 #9	EXO1 (ENSABRG00000021292) #10	MAP1LC3C (ENSABRG00000021300) #12	ENSABRG00000021304	PLD5 (ENSABRG00000021308) #14	CEP170 (ENSABRG00000021318) #16	ENSABRG00000021331	AKT3 (ENSABRG00000021338) #18	ZBTB18 (ENSABRG00000021346) #22	ADSS2 (ENSABRG00000021352) #24	DESI2 (ENSABRG00000021358) #27
Duck	MODERN SPECIES	21	RYR2 (ENSAPLG00000011026)	ENSAPLG00000019479	CHRM3 (ENSAPLG00000014510)	FMN2 (ENSAPLG00000014536)	GREM2 (ENSAPLG00000001754)	RGS7 (ENSAPLG00000014655)	PIGM (ENSAPLG00000028189)	OPN3 (ENSAPLG00000014871) #8	EXO1 (ENSAPLG00000015042) #10	MAP1LC3C (ENSAPLG00000023202) #12	ENSAPLG00000030016	PLD5 (ENSAPLG00000015142) #14	CEP170 (ENSAPLG00000010551) #16	ENSAPLG00000011088	AKT3 (ENSAPLG00000011477) #18	ZBTB18 (ENSAPLG00000002367) #22	ENSAPLG00000011818 #23	ADSS2 (ENSAPLG00000011820) #24	DESI2 (ENSAPLG00000012155) #27	HNRNPU (ENSAPLG00000012268) #29	EFCAB2 (ENSAPLG00000012390) #30	KIF26B (ENSAPLG00000012419)	ENSAPLG00000019495	SMYD3 (ENSAPLG00000028273) #31	CNST (ENSAPLG00000014445) #34	SCCPDH (ENSAPLG00000004893) #35	ENSAPLG00000026920	AHCTF1 (ENSAPLG00000005120) #36	SRD5A2 (ENSAPLG00000025223)	MEMO1 (ENSAPLG00000005693)	SPAST (ENSAPLG00000015351)
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #24	ENSGT00960000189749	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766.s.b.b #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104	ENSGT00390000018900 #36	ENSGT00950000182886.b.a	ENSGT00390000006408
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #24	ENSGT00960000189749	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766.s.b.b #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104.e	ENSGT00390000018900 #36	ENSGT00950000182886.b.a	ENSGT00390000006408
Chicken	MODERN SPECIES	22	FMN2 (ENSGALG00010008880)	GREM2 (ENSGALG00010008824)	RGS7 (ENSGALG00010008637)	PIGM (ENSGALG00010010361)	OPN3 (ENSGALG00010008451) #8	WDR64 (ENSGALG00010008442) #9	EXO1 (ENSGALG00010008422) #10	MAP1LC3C (ENSGALG00010008400) #12	PLD5 (ENSGALG00010008383) #14	ENSGALG00010008367	ENSGALG00010008364	ENSGALG00010010897 #16	ENSGALG00010008356 #16	ENSGALG00010008348	AKT3 (ENSGALG00010008323) #18	ZBTB18 (ENSGALG00010008312) #22	ADSS2 (ENSGALG00010008285) #24	C1orf101 (ENSGALG00010008263)	DESI2 (ENSGALG00010008257) #27	COX20 (ENSGALG00010008226) #28	HNRNPU (ENSGALG00010008192) #29	EFCAB2 (ENSGALG00010006865) #30	KIF26B (ENSGALG00010006958)	SMYD3 (ENSGALG00010006922) #31	TFB2M (ENSGALG00010010346) #32	CNST (ENSGALG00010010338) #34	SCCPDH (ENSGALG00010010197) #35	ENSGALG00010010164	AHCTF1 (ENSGALG00010010125) #36	SRD5A2 (ENSGALG00010007017)	MEMO1 (ENSGALG00010007365)
Turkey	MODERN SPECIES	11	ENSMGAG00000011391 #35	ENSMGAG00000019870	ENSMGAG00000011401 #34	ENSMGAG00000011408 #32	ENSMGAG00000018106	ENSMGAG00000020397 #31	ENSMGAG00000011410 #31	ENSMGAG00000011412	EFCAB2 (ENSMGAG00000011423) #30	ENSMGAG00000011449 #28	ENSMGAG00000011427 #29	ENSMGAG00000017863 #27	ENSMGAG00000021227 #25	ENSMGAG00000021050 #24	ENSMGAG00000011463 #24	ENSMGAG00000011476 #22	ENSMGAG00000011487	ENSMGAG00000011477 #18	ENSMGAG00000018419	ENSMGAG00000018116 #16	ENSMGAG00000011504 #16	ENSMGAG00000021098	ENSMGAG00000021812 #14	ENSMGAG00000023018 #12	ENSMGAG00000011525 #10	ENSMGAG00000021226 #9	ENSMGAG00000011527 #9	ENSMGAG00000011545 #8	ENSMGAG00000011557	ENSMGAG00000018471	ENSMGAG00000015834
Japanese quail	MODERN SPECIES	21	MTR (ENSCJPG00005016942)	RYR2 (ENSCJPG00005013886)	CHRM3 (ENSCJPG00005013867)	ENSCJPG00005013865	GREM2 (ENSCJPG00005013864)	RGS7 (ENSCJPG00005013863)	PIGM (ENSCJPG00005013862)	OPN3 (ENSCJPG00005013861) #8	ENSCJPG00005013860 #9	EXO1 (ENSCJPG00005013858) #10	MAP1LC3C (ENSCJPG00005013857) #12	PLD5 (ENSCJPG00005013854) #14	CEP170 (ENSCJPG00005013850) #16	ENSCJPG00005013849	AKT3 (ENSCJPG00005013848) #18	ZBTB18 (ENSCJPG00005013847) #22	ADSS2 (ENSCJPG00005013811) #24	DESI2 (ENSCJPG00005013810) #27	COX20 (ENSCJPG00005013809) #28	HNRNPU (ENSCJPG00005013808) #29	ENSCJPG00005013807	KIF26B (ENSCJPG00005013806)	ENSCJPG00005013805 #31	ENSCJPG00005013804 #31	TFB2M (ENSCJPG00005013803) #32	CNST (ENSCJPG00005013802) #34	SCCPDH (ENSCJPG00005013801) #35	ENSCJPG00005013800	AHCTF1 (ENSCJPG00005013799) #36	SRD5A2 (ENSCJPG00005013798)	MEMO1 (ENSCJPG00005013797)
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #24	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00960000189424	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766.s.b.a #31	ENSGT00940000156766.s.b.b #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36	ENSGT00950000182886.b.a
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.j	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #24	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766.s.b.a #31	ENSGT00940000156766.s.b.b #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36	ENSGT00950000182886.b.a	ENSGT00390000006408	ENSGT00390000008808
Great tit	MODERN SPECIES	22	QPCT (ENSPMJG00000015109)	SLC30A6 (ENSPMJG00000015108)	ENSPMJG00000015107	SPAST (ENSPMJG00000015106)	DPY30 (ENSPMJG00000015105)	MEMO1 (ENSPMJG00000015104)	SRD5A2 (ENSPMJG00000015102)	ENSPMJG00000015100 #36	AKT3 (ENSPMJG00000015099) #18	ENSPMJG00000015098	CEP170 (ENSPMJG00000015097) #16	PLD5 (ENSPMJG00000015095) #14	RSPH9 (ENSPMJG00000015094)	MRPS18A (ENSPMJG00000015093)	VEGFA (ENSPMJG00000015091)	ZBTB18 (ENSPMJG00000015085) #22	ENSPMJG00000015083	ENSPMJG00000015081	ADSS2 (ENSPMJG00000015080) #24	DESI2 (ENSPMJG00000015079) #27	COX20 (ENSPMJG00000015078) #28	HNRNPU (ENSPMJG00000015077) #29	EFCAB2 (ENSPMJG00000015075) #30	KIF26B (ENSPMJG00000015074)	ENSPMJG00000015073 #31	ENSPMJG00000015072 #31	TFB2M (ENSPMJG00000015071) #32	CNST (ENSPMJG00000015070) #34	SCCPDH (ENSPMJG00000015069) #35	MRPL14 (ENSPMJG00000015068)	TMEM63B (ENSPMJG00000014856)
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.j	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #24	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766.s.b.a #31	ENSGT00940000156766.s.b.b #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36	ENSGT00950000182886.b.a	ENSGT00390000006408	ENSGT00390000008808
Flycatcher	MODERN SPECIES	21	TMEM151B (ENSFALG00000011278)	NFKBIE (ENSFALG00000011284)	SLC35B2 (ENSFALG00000023207)	HSP90AB1 (ENSFALG00000011300)	SLC29A1 (ENSFALG00000011304)	CAPN11 (ENSFALG00000011310)	TMEM63B (ENSFALG00000011313)	MRPL14 (ENSFALG00000011324)	VEGFA (ENSFALG00000027112)	MRPS18A (ENSFALG00000011356)	RSPH9 (ENSFALG00000025305)	PLD5 (ENSFALG00000011379) #14	CEP170 (ENSFALG00000011398) #16	ENSFALG00000011420	AKT3 (ENSFALG00000011439) #18	ZBTB18 (ENSFALG00000011473) #22	ADSS2 (ENSFALG00000011484) #24	DESI2 (ENSFALG00000011507) #27	HNRNPU (ENSFALG00000011528) #29	EFCAB2 (ENSFALG00000011546) #30	KIF26B (ENSFALG00000011555)	ENSFALG00000011563 #31	ENSFALG00000023592 #31	TFB2M (ENSFALG00000011573) #32	CNST (ENSFALG00000011587) #34	SCCPDH (ENSFALG00000023810) #35	ENSFALG00000027448 #36	ENSFALG00000011625 #36	SRD5A2 (ENSFALG00000025876)	MEMO1 (ENSFALG00000011653)	DPY30 (ENSFALG00000023125)
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.j	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #24	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766.s.b.a #31	ENSGT00940000156766.s.b.b #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900.j #36	ENSGT00390000018900.i #36	ENSGT00950000182886.b.a	ENSGT00390000006408
Passeroidea	ANCESTRAL SPECIES		ENSGT00390000013762.b.a	ENSGT00940000159120	ENSGT00940000157927	ENSGT01020000230401.a.a.a.j	ENSGT00950000182898.a.a.a.a.b	ENSGT00940000158672	ENSGT00940000157084	ENSGT00390000001121	ENSGT00940000157284	ENSGT00390000006493	ENSGT00390000018686	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #24	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766.s.b.b #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900.j.a #36	ENSGT00390000018900.j.b #36	ENSGT00950000182886.b.a	ENSGT00390000006408	ENSGT00390000008808
Common canary	MODERN SPECIES	1	TMEM151B (ENSSCAG00000013650)	NFKBIE (ENSSCAG00000013648)	SLC35B2 (ENSSCAG00000013646)	HSP90AB1 (ENSSCAG00000013643)	SLC29A1 (ENSSCAG00000013635)	CAPN11 (ENSSCAG00000013612)	TMEM63B (ENSSCAG00000013598)	MRPL14 (ENSSCAG00000013591)	VEGFA (ENSSCAG00000013564)	MRPS18A (ENSSCAG00000013545)	RSPH9 (ENSSCAG00000013509)	PLD5 (ENSSCAG00000013478) #14	CEP170 (ENSSCAG00000013445) #16	ENSSCAG00000013409	AKT3 (ENSSCAG00000013390) #18	ZBTB18 (ENSSCAG00000013375) #22	ADSS2 (ENSSCAG00000013319) #24	DESI2 (ENSSCAG00000013277) #27	COX20 (ENSSCAG00000013270) #28	HNRNPU (ENSSCAG00000012822) #29	EFCAB2 (ENSSCAG00000012708) #30	KIF26B (ENSSCAG00000012689)	ENSSCAG00000012675 #31	ENSSCAG00000012669 #31	ENSSCAG00000012664 #32	CNST (ENSSCAG00000012662) #34	SCCPDH (ENSSCAG00000012649) #35	ENSSCAG00000012619 #36	ENSSCAG00000012351 #36	SRD5A2 (ENSSCAG00000012273)	MEMO1 (ENSSCAG00000012271)
Zebra finch	MODERN SPECIES	23	TMEM151B (ENSTGUG00000007960)	SLC35B2 (ENSTGUG00000007969)	ENSTGUG00000026910	ENSTGUG00000026786	SLC29A1 (ENSTGUG00000007972)	CAPN11 (ENSTGUG00000008009)	TMEM63B (ENSTGUG00000008105)	MRPL14 (ENSTGUG00000008134)	VEGFA (ENSTGUG00000008137)	MRPS18A (ENSTGUG00000021976)	RSPH9 (ENSTGUG00000008150)	PLD5 (ENSTGUG00000008155) #14	CEP170 (ENSTGUG00000008164) #16	ENSTGUG00000008192	AKT3 (ENSTGUG00000008212) #18	ZBTB18 (ENSTGUG00000008247) #22	ADSS2 (ENSTGUG00000008252) #24	DESI2 (ENSTGUG00000024880) #27	HNRNPU (ENSTGUG00000008309) #29	EFCAB2 (ENSTGUG00000019448) #30	KIF26B (ENSTGUG00000008377)	ENSTGUG00000029207 #31	ENSTGUG00000021382 #31	TFB2M (ENSTGUG00000008396) #32	CNST (ENSTGUG00000008403) #34	ENSTGUG00000009271	ENSTGUG00000009240	ENSTGUG00000009224	MAD2L1BP (ENSTGUG00000025478)	GTPBP2 (ENSTGUG00000009198)	POLH (ENSTGUG00000009195)
Medium ground finch	MODERN SPECIES	2	TMEM151B (ENSGFOG00000008584)	NFKBIE (ENSGFOG00000008595)	SLC35B2 (ENSGFOG00000008713)	HSP90AB1 (ENSGFOG00000008726)	SLC29A1 (ENSGFOG00000008809)	CAPN11 (ENSGFOG00000008822)	TMEM63B (ENSGFOG00000008835)	MRPL14 (ENSGFOG00000008855)	VEGFA (ENSGFOG00000008871)	RSPH9 (ENSGFOG00000009102)	MRPS18A (ENSGFOG00000009108)	PLD5 (ENSGFOG00000009114) #14	CEP170 (ENSGFOG00000009123) #16	ENSGFOG00000009156	AKT3 (ENSGFOG00000009182) #18	ZBTB18 (ENSGFOG00000009192) #22	ADSS2 (ENSGFOG00000009201) #24	DESI2 (ENSGFOG00000009482) #27	COX20 (ENSGFOG00000009494) #28	HNRNPU (ENSGFOG00000009639) #29	EFCAB2 (ENSGFOG00000000037) #30	KIF26B (ENSGFOG00000000039)	ENSGFOG00000000043 #31	ENSGFOG00000000048 #31	ENSGFOG00000000051 #32	CNST (ENSGFOG00000000055) #34	SCCPDH (ENSGFOG00000000059) #35	AHCTF1 (ENSGFOG00000000080) #36	SRD5A2 (ENSGFOG00000000139)	MEMO1 (ENSGFOG00000000144)	DPY30 (ENSGFOG00000000149)
Neognathae_c	ANCESTRAL SPECIES	5	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000170414	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT00390000015553.a.a.b #24	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00960000189424	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000156992	ENSGT00940000156766.s.b.a #31	ENSGT00940000156766.s.b.b #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00390000018900 #36	ENSGT00950000182886.b.a
Golden eagle	MODERN SPECIES	4	RYR2 (ENSACCG00020010478)	CHRM3 (ENSACCG00020009211)	ENSACCG00020009194	GREM2 (ENSACCG00020009170)	RGS7 (ENSACCG00020009103)	PIGM (ENSACCG00020009063)	OPN3 (ENSACCG00020009054) #8	WDR64 (ENSACCG00020009035) #9	EXO1 (ENSACCG00020008994) #10	MAP1LC3C (ENSACCG00020008971) #12	ENSACCG00020008958	PLD5 (ENSACCG00020008933) #14	CEP170 (ENSACCG00020008889) #16	ENSACCG00020008818	AKT3 (ENSACCG00020008750) #18	ZBTB18 (ENSACCG00020008740) #22	ENSACCG00020008728	ADSS2 (ENSACCG00020008703) #24	DESI2 (ENSACCG00020008693) #27	COX20 (ENSACCG00020008679) #28	ENSACCG00020008665	HNRNPU (ENSACCG00020008633) #29	EFCAB2 (ENSACCG00020008604) #30	KIF26B (ENSACCG00020008572)	ENSACCG00020008547 #31	ENSACCG00020008515 #31	TFB2M (ENSACCG00020008479) #32	CNST (ENSACCG00020008462) #34	SCCPDH (ENSACCG00020008443) #35	AHCTF1 (ENSACCG00020008399) #36	SRD5A2 (ENSACCG00020008376)
Kakapo	MODERN SPECIES	2	ACTN2 (ENSSHBG00005010917)	MTR (ENSSHBG00005011060)	RYR2 (ENSSHBG00005014250)	FMN2 (ENSSHBG00005021049)	GREM2 (ENSSHBG00005021059)	RGS7 (ENSSHBG00005021061)	PIGM (ENSSHBG00005021062)	OPN3 (ENSSHBG00005021063) #8	ENSSHBG00005021065 #9	EXO1 (ENSSHBG00005021067) #10	MAP1LC3C (ENSSHBG00005021069) #12	PLD5 (ENSSHBG00005021070) #14	CEP170 (ENSSHBG00005021076) #16	ENSSHBG00005021079	AKT3 (ENSSHBG00005021092) #18	ZBTB18 (ENSSHBG00005021093) #22	ADSS2 (ENSSHBG00005021096) #24	DESI2 (ENSSHBG00005021098) #27	COX20 (ENSSHBG00005021099) #28	HNRNPU (ENSSHBG00005021100) #29	EFCAB2 (ENSSHBG00005021101) #30	KIF26B (ENSSHBG00005021103)	ENSSHBG00005021106 #31	ENSSHBG00005021108 #31	TFB2M (ENSSHBG00005021109) #32	ENSSHBG00005021110	CNST (ENSSHBG00005021111) #34	SCCPDH (ENSSHBG00005021115) #35	AHCTF1 (ENSSHBG00005021118) #36	SRD5A2 (ENSSHBG00005021120)	MEMO1 (ENSSHBG00005021122)
African ostrich	MODERN SPECIES	935												CEP170 (ENSSCUG00000017975) #16	ENSSCUG00000017982	AKT3 (ENSSCUG00000017989) #18	ENSSCUG00000017991	ZBTB18 (ENSSCUG00000017992) #22
Australian saltwater crocodile	MODERN SPECIES	60	CHRM3 (ENSCPRG00005014581)	ENSCPRG00005014577	ENSCPRG00005014566	GREM2 (ENSCPRG00005014565)	RGS7 (ENSCPRG00005014452)	PIGM (ENSCPRG00005014387)	OPN3 (ENSCPRG00005014373) #8	WDR64 (ENSCPRG00005014354) #9	EXO1 (ENSCPRG00005014340) #10	MAP1LC3C (ENSCPRG00005014326) #12	PLD5 (ENSCPRG00005014316) #14	ENSCPRG00005014303	CEP170 (ENSCPRG00005014277) #16	ENSCPRG00005014262	AKT3 (ENSCPRG00005014254) #18	ZBTB18 (ENSCPRG00005014249) #22	C1orf100 (ENSCPRG00005014243) #23	ADSS2 (ENSCPRG00005014241) #24	DESI2 (ENSCPRG00005014238) #27	ENSCPRG00005014235	COX20 (ENSCPRG00005014229) #28	HNRNPU (ENSCPRG00005013940) #29	EFCAB2 (ENSCPRG00005013903) #30	KIF26B (ENSCPRG00005013894)	ENSCPRG00005013850 #31	ENSCPRG00005013821 #31	TFB2M (ENSCPRG00005013817) #32	CNST (ENSCPRG00005013810) #34	SCCPDH (ENSCPRG00005013798) #35	ENSCPRG00005013782	AHCTF1 (ENSCPRG00005013777) #36
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00940000154289.B	ENSGT01030000235112	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT00950000183059.b.a.b #14	ENSGT01100000263477.B	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT01000000216868	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766.s #31	ENSGT00940000156766.t #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Testudinoidea	ANCESTRAL SPECIES		ENSGT01030000235112	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT01100000263477.B.a.b.a.b	ENSGT00950000183059.b.a.b #14	ENSGT01100000263477.B.a.a	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT01000000216868	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766.s #31	ENSGT00940000156766.t #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Emydidae	ANCESTRAL SPECIES		ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037.g #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT01100000263477.B.a.b.b	ENSGT01100000263477.B.a.b.a.a	ENSGT01100000263477.B.a.b.a.b	ENSGT00950000183059.b.a.b #14	ENSGT01100000263477.B.a.a	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT01000000216868	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766.s #31	ENSGT00940000156766.t #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00390000005861 #34	ENSGT00390000004799 #35	ENSGT00940000163104
Three-toed box turtle	MODERN SPECIES	31	OPN3 (ENSTMTG00000009640) #8	ENSTMTG00000009618 #9	ENSTMTG00000009584 #9	EXO1 (ENSTMTG00000009610) #10	MAP1LC3C (ENSTMTG00000009592) #12	ENSTMTG00000009581	ENSTMTG00000009558	ENSTMTG00000009546	PLD5 (ENSTMTG00000009450) #14	ENSTMTG00000009425	ENSTMTG00000009398 #16	ENSTMTG00000009377 #16	ENSTMTG00000009362 #16	ENSTMTG00000008872	AKT3 (ENSTMTG00000008734) #18	ZBTB18 (ENSTMTG00000008708) #22	ADSS2 (ENSTMTG00000008677) #24	ENSTMTG00000008625	DESI2 (ENSTMTG00000008608) #27	COX20 (ENSTMTG00000008601) #28	HNRNPU (ENSTMTG00000008554) #29	EFCAB2 (ENSTMTG00000008442) #30	ENSTMTG00000008415	ENSTMTG00000008402	KIF26B (ENSTMTG00000008353)	ENSTMTG00000008337 #31	ENSTMTG00000008323 #31	TFB2M (ENSTMTG00000008308) #32	CNST (ENSTMTG00000008293) #34	SCCPDH (ENSTMTG00000008269) #35	ENSTMTG00000008213
painted turtle	MODERN SPECIES	740	FMN2 (ENSCPBG00000008555)	RGS7 (ENSCPBG00000008651)	PIGM (ENSCPBG00000008700)	ENSCPBG00000008703 #8	ENSCPBG00000008720 #9	EXO1 (ENSCPBG00000008725) #10	MAP1LC3C (ENSCPBG00000008734) #12	ENSCPBG00000008739	ENSCPBG00000008747	ENSCPBG00000008755	PLD5 (ENSCPBG00000008770) #14	ENSCPBG00000008793	CEP170 (ENSCPBG00000008802) #16	ENSCPBG00000008841	AKT3 (ENSCPBG00000008877) #18	ZBTB18 (ENSCPBG00000008891) #22	ENSCPBG00000008896	ADSS2 (ENSCPBG00000008911) #24	CATSPERE (ENSCPBG00000009395) #25	DESI2 (ENSCPBG00000009405) #27	COX20 (ENSCPBG00000009409) #28	HNRNPU (ENSCPBG00000009415) #29	EFCAB2 (ENSCPBG00000009428) #30	KIF26B (ENSCPBG00000009439)	ENSCPBG00000009453 #31
Testudinidae	ANCESTRAL SPECIES	6	ENSGT00940000161899	ENSGT00940000154209.a.b	ENSGT00940000156661	ENSGT00390000017728	ENSGT01100000263502.A.a.b #8	ENSGT00940000160037 #9	ENSGT00510000047676 #10	ENSGT00940000161852.y.a #12	ENSGT01100000263477.B.a.b.a.b	ENSGT00950000183059.b.a.b.j #14	ENSGT00950000183059.b.a.b.i #14	ENSGT01100000263477.B.a.a	ENSGT00940000155103.a.b #16	ENSGT00940000164292	ENSGT00940000157060 #18	ENSGT00940000155092.b #22	ENSGT01000000216868	ENSGT00390000015553.a.a.b #24	ENSGT00940000162691 #25	ENSGT00730000111005 #27	ENSGT00390000016158 #28	ENSGT00940000156546 #29	ENSGT00940000160590 #30	ENSGT00940000165019	ENSGT00940000156992	ENSGT00940000156766.s #31	ENSGT00940000156766.t #31	ENSGT00950000183142.a.b.a.b #32	ENSGT00940000171704	ENSGT00390000005861 #34	ENSGT00390000004799 #35
Abingdon island giant tortoise	MODERN SPECIES	2165										ENSCABG00000019244	ENSCABG00000019243 #16	ENSCABG00000019241 #16	ENSCABG00000019240 #16	ENSCABG00000019231	AKT3 (ENSCABG00000019225) #18	ZBTB18 (ENSCABG00000019220) #22	ADSS2 (ENSCABG00000019217) #24	ENSCABG00000019211	DESI2 (ENSCABG00000019209) #27	COX20 (ENSCABG00000019207) #28	HNRNPU (ENSCABG00000019135) #29	EFCAB2 (ENSCABG00000019130) #30	ENSCABG00000019128	KIF26B (ENSCABG00000019123)	ENSCABG00000019116 #31	ENSCABG00000019112 #31	TFB2M (ENSCABG00000019111) #32	ENSCABG00000019110	CNST (ENSCABG00000019108) #34	SCCPDH (ENSCABG00000019105) #35	ENSCABG00000019102
Goode s thornscrub tortoise	MODERN SPECIES	17	ENSGEVG00005006835	GREM2 (ENSGEVG00005006866)	RGS7 (ENSGEVG00005006882)	PIGM (ENSGEVG00005006959)	OPN3 (ENSGEVG00005006979) #8	WDR64 (ENSGEVG00005007015) #9	EXO1 (ENSGEVG00005007131) #10	MAP1LC3C (ENSGEVG00005007218) #12	ENSGEVG00005007255	ENSGEVG00005007282 #14	ENSGEVG00005007295 #14	ENSGEVG00005007329	CEP170 (ENSGEVG00005007486) #16	ENSGEVG00005008314	AKT3 (ENSGEVG00005008378) #18	ZBTB18 (ENSGEVG00005008483) #22	ENSGEVG00005008494	ADSS2 (ENSGEVG00005008513) #24	ENSGEVG00005008540 #25	DESI2 (ENSGEVG00005008575) #27	COX20 (ENSGEVG00005008584) #28	HNRNPU (ENSGEVG00005008607) #29	EFCAB2 (ENSGEVG00005008659) #30	ENSGEVG00005008713	KIF26B (ENSGEVG00005008743)	ENSGEVG00005008863 #31	ENSGEVG00005008911 #31	TFB2M (ENSGEVG00005008934) #32	CNST (ENSGEVG00005009018) #34	SCCPDH (ENSGEVG00005009063) #35	ENSGEVG00005009122