Theria	ANCESTRAL SPECIES	6	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000168784 #35	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000168784 #35	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000168784 #35	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Primates	ANCESTRAL SPECIES	10	ENSGT00910000148499	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Haplorrhini	ANCESTRAL SPECIES	20	ENSGT00910000148499	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00910000148499	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722 #18	ENSGT00390000015089.c #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00390000008403.z #24	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722.m.a #18	ENSGT00390000015089.c #19	ENSGT00940000160512.a #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00390000008403.z #24	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Hominidae	ANCESTRAL SPECIES	12	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722.m.a #18	ENSGT00390000015089.c #19	ENSGT00940000160512.a #20	ENSGT00940000154391.a.a #22	ENSGT00390000008403.z #24	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214.b #14	ENSGT00550000075214.a #16	ENSGT00940000158660 #17	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722.m.a #18	ENSGT00390000015089.c.c #19	ENSGT00940000160512.a #20	ENSGT00940000154391.a.a #22	ENSGT00390000008403.z #24	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214.b.b #12	ENSGT00550000075214.b.a #14	ENSGT00550000075214.a #16	ENSGT00940000158660 #17	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722.m.a #18	ENSGT00390000015089.c.c #19	ENSGT00940000160512.a #20	ENSGT00940000154391.a.a #22	ENSGT00390000008403.z #24	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Pan	ANCESTRAL SPECIES	7	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214.b.b #12	ENSGT00550000075214.b.a #14	ENSGT00550000075214.a.a #16	ENSGT00940000158660 #17	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722.m.a #18	ENSGT00390000015089.c.c #19	ENSGT00940000160512.a #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00390000008403.z #24	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Chimpanzee	MODERN SPECIES	17	USP38 (ENSPTRG00000016470) #7	GAB1 (ENSPTRG00000016471) #8	ENSPTRG00000044130 #9	SMARCA5 (ENSPTRG00000016472) #10	FREM3 (ENSPTRG00000016474) #11	ENSPTRG00000038865 #12	ENSPTRG00000046937 #13	ENSPTRG00000034083 #14	ENSPTRG00000047026 #15	GYPA (ENSPTRG00000016478) #16	HHIP (ENSPTRG00000016479) #17	ANAPC10 (ENSPTRG00000016480) #18	ABCE1 (ENSPTRG00000016481) #19	OTUD4 (ENSPTRG00000016482) #20	ENSPTRG00000041132 #21	SMAD1 (ENSPTRG00000016485) #22	MMAA (ENSPTRG00000016486) #23	ENSPTRG00000046350 #24	C4H4orf51 (ENSPTRG00000048001) #25	ZNF827 (ENSPTRG00000016487) #26	LSM6 (ENSPTRG00000016488) #27	REELD1 (ENSPTRG00000039070) #28	SLC10A7 (ENSPTRG00000016491) #29	POU4F2 (ENSPTRG00000016492) #30	TTC29 (ENSPTRG00000016493) #31	EDNRA (ENSPTRG00000016494) #32	TMEM184C (ENSPTRG00000016495) #33	PRMT9 (ENSPTRG00000016496) #34	ENSPTRG00000045979 #35	ARHGAP10 (ENSPTRG00000016497) #36	NR3C2 (ENSPTRG00000016499) #37
Bonobo	MODERN SPECIES	17	ENSPPAG00000041816	INPP4B (ENSPPAG00000042739)	USP38 (ENSPPAG00000041444) #7	GAB1 (ENSPPAG00000039393) #8	ENSPPAG00000039385	SMARCA5 (ENSPPAG00000028523) #10	FREM3 (ENSPPAG00000029454) #11	GYPB (ENSPPAG00000042513) #14	GYPA (ENSPPAG00000042526) #16	HHIP (ENSPPAG00000032784) #17	ENSPPAG00000034777	ANAPC10 (ENSPPAG00000034191) #18	ABCE1 (ENSPPAG00000011660) #19	OTUD4 (ENSPPAG00000025977) #20	ENSPPAG00000027561 ##21	SMAD1 (ENSPPAG00000027603) #22	MMAA (ENSPPAG00000031747) #23	ENSPPAG00000023693 #24	C4orf51 (ENSPPAG00000040867) #25	ZNF827 (ENSPPAG00000041685) #26	LSM6 (ENSPPAG00000037929) #27	REELD1 (ENSPPAG00000020090) #28	SLC10A7 (ENSPPAG00000031603) #29	POU4F2 (ENSPPAG00000035263) #30	TTC29 (ENSPPAG00000039325) #31	ENSPPAG00000027341	EDNRA (ENSPPAG00000037609) #32	TMEM184C (ENSPPAG00000032567) #33	PRMT9 (ENSPPAG00000043067) #34	ARHGAP10 (ENSPPAG00000003388) #36	NR3C2 (ENSPPAG00000031751) #37
Human	MODERN SPECIES	16	RNF150 (ENSG00000170153)	ZNF330 (ENSG00000109445)	IL15 (ENSG00000164136)	INPP4B (ENSG00000109452)	USP38 (ENSG00000170185) #7	GAB1 (ENSG00000109458) #8	SMARCA5 (ENSG00000153147) #10	FREM3 (ENSG00000183090) #11	GYPE (ENSG00000197465) #12	GYPB (ENSG00000250361) #14	GYPA (ENSG00000170180) #16	HHIP (ENSG00000164161) #17	ANAPC10 (ENSG00000164162) #18	ABCE1 (ENSG00000164163) #19	OTUD4 (ENSG00000164164) #20	SMAD1 (ENSG00000170365) #22	MMAA (ENSG00000151611) #23	C4orf51 (ENSG00000237136) #25	ZNF827 (ENSG00000151612) #26	LSM6 (ENSG00000164167) #27	REELD1 (ENSG00000250673) #28	SLC10A7 (ENSG00000120519) #29	POU4F2 (ENSG00000151615) #30	TTC29 (ENSG00000137473) #31	EDNRA (ENSG00000151617) #32	TMEM184C (ENSG00000164168) #33	PRMT9 (ENSG00000164169) #34	ARHGAP10 (ENSG00000071205) #36	NR3C2 (ENSG00000151623) #37	IQCM (ENSG00000234828)	DCLK2 (ENSG00000170390)
Gorilla	MODERN SPECIES	17	TBC1D9 (ENSGGOG00000006878)	RNF150 (ENSGGOG00000023601)	ZNF330 (ENSGGOG00000006078)	IL15 (ENSGGOG00000011285)	INPP4B (ENSGGOG00000027193)	USP38 (ENSGGOG00000002044) #7	GAB1 (ENSGGOG00000000020) #8	SMARCA5 (ENSGGOG00000012595) #10	FREM3 (ENSGGOG00000008352) #11	GYPA (ENSGGOG00000015552) #16	HHIP (ENSGGOG00000013359) #17	ENSGGOG00000038059	ANAPC10 (ENSGGOG00000025091) #18	ABCE1 (ENSGGOG00000022726) #19	ENSGGOG00000002462 ##20	SMAD1 (ENSGGOG00000022121) #22	MMAA (ENSGGOG00000002558) #23	C4orf51 (ENSGGOG00000038659) #25	ZNF827 (ENSGGOG00000004696) #26	LSM6 (ENSGGOG00000001310) #27	REELD1 (ENSGGOG00000043474) #28	ENSGGOG00000034808 #29	POU4F2 (ENSGGOG00000001836) #30	TTC29 (ENSGGOG00000004691) #31	EDNRA (ENSGGOG00000000619) #32	ENSGGOG00000038929	TMEM184C (ENSGGOG00000013660) #33	PRMT9 (ENSGGOG00000013668) #34	ARHGAP10 (ENSGGOG00000014936) #36	NR3C2 (ENSGGOG00000001102) #37	IQCM (ENSGGOG00000025100)
Orangutan	MODERN SPECIES	17	TBC1D9 (ENSPPYG00000015082)	RNF150 (ENSPPYG00000015083)	ZNF330 (ENSPPYG00000015084)	IL15 (ENSPPYG00000015085)	INPP4B (ENSPPYG00000015086)	USP38 (ENSPPYG00000015088) #7	GAB1 (ENSPPYG00000015090) #8	SMARCA5 (ENSPPYG00000015091) #10	FREM3 (ENSPPYG00000015093) #11	ENSPPYG00000015094 #16	HHIP (ENSPPYG00000015095) #17	ANAPC10 (ENSPPYG00000037049) #18	ABCE1 (ENSPPYG00000015097) #19	OTUD4 (ENSPPYG00000015098) #20	ENSPPYG00000038758	SMAD1 (ENSPPYG00000038063) #22	MMAA (ENSPPYG00000015103) #23	C4orf51 (ENSPPYG00000032371) #25	ENSPPYG00000015104 #26	LSM6 (ENSPPYG00000031358) #27	REELD1 (ENSPPYG00000038439) #28	SLC10A7 (ENSPPYG00000015106) #29	POU4F2 (ENSPPYG00000015107) #30	TTC29 (ENSPPYG00000015108) #31	EDNRA (ENSPPYG00000015109) #32	TMEM184C (ENSPPYG00000034968) #33	PRMT9 (ENSPPYG00000015111) #34	ARHGAP10 (ENSPPYG00000015112) #36	NR3C2 (ENSPPYG00000015113) #37	IQCM (ENSPPYG00000015114)	DCLK2 (ENSPPYG00000015115)
Gibbon	MODERN SPECIES	22	UCP1 (ENSNLEG00000005170)	TBC1D9 (ENSNLEG00000005185)	RNF150 (ENSNLEG00000005230)	ZNF330 (ENSNLEG00000033135)	IL15 (ENSNLEG00000005257)	INPP4B (ENSNLEG00000005284)	USP38 (ENSNLEG00000005343) #7	GAB1 (ENSNLEG00000005366) #8	SMARCA5 (ENSNLEG00000005383) #10	FREM3 (ENSNLEG00000005425) #11	ENSNLEG00000032234 #16	HHIP (ENSNLEG00000005430) #17	ANAPC10 (ENSNLEG00000005453) #18	ENSNLEG00000005460 #19	OTUD4 (ENSNLEG00000005494) #20	SMAD1 (ENSNLEG00000005537) #22	MMAA (ENSNLEG00000032493) #23	ENSNLEG00000029298 #24	ENSNLEG00000018924	C4orf51 (ENSNLEG00000005557) #25	ZNF827 (ENSNLEG00000005560) #26	LSM6 (ENSNLEG00000005584) #27	REELD1 (ENSNLEG00000035386) #28	SLC10A7 (ENSNLEG00000032871) #29	ENSNLEG00000036026	POU4F2 (ENSNLEG00000005619) #30	TTC29 (ENSNLEG00000005624) #31	EDNRA (ENSNLEG00000005640) #32	ENSNLEG00000005651 #33	PRMT9 (ENSNLEG00000005657) #34	ARHGAP10 (ENSNLEG00000005671) #36
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722 #18	ENSGT00390000015089.c #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00390000008403.z #24	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.i.b #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Rhinopithecus	ANCESTRAL SPECIES	565																ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.i.b #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30
Black snub-nosed monkey	MODERN SPECIES	685										ENSRBIG00000038383	ANAPC10 (ENSRBIG00000028929) #18	ABCE1 (ENSRBIG00000008340) #19	OTUD4 (ENSRBIG00000035124) #20	ENSRBIG00000039194	ENSRBIG00000033228	SMAD1 (ENSRBIG00000032479) #22	MMAA (ENSRBIG00000030561) #23	C4orf51 (ENSRBIG00000035478) #25	ZNF827 (ENSRBIG00000039596) #26	LSM6 (ENSRBIG00000027878) #27	REELD1 (ENSRBIG00000031487) #28	SLC10A7 (ENSRBIG00000032124) #29	POU4F2 (ENSRBIG00000030928) #30
Golden snub-nosed monkey	MODERN SPECIES	593										ANAPC10 (ENSRROG00000022239) #18	ENSRROG00000029310	ABCE1 (ENSRROG00000033945) #19	OTUD4 (ENSRROG00000035696) #20	ENSRROG00000044373	ENSRROG00000045571	SMAD1 (ENSRROG00000042440) #22	MMAA (ENSRROG00000028820) #23	C4orf51 (ENSRROG00000035262) #25	ZNF827 (ENSRROG00000018716) #26	LSM6 (ENSRROG00000024868) #27	REELD1 (ENSRROG00000045752) #28	SLC10A7 (ENSRROG00000044034) #29	POU4F2 (ENSRROG00000040033) #30
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722 #18	ENSGT00390000015089.c #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00390000008403.z #24	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.i.b #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722 #18	ENSGT00390000015089.c #19	ENSGT00940000160512 #20	ENSGT00390000002615.o.b	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00390000008403.z #24	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.i.b #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT00940000153314.a.a.l.b	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37
Macaca	ANCESTRAL SPECIES	18	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00390000001958.t.a.h	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089.c #19	ENSGT00940000160512 #20	ENSGT00390000002615.o.b	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00390000008403.z #24	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.i.b #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT00940000153314.a.a.l.b	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37
Pig-tailed macaque	MODERN SPECIES	306							ENSMNEG00000012862 #16	ENSMNEG00000027304	HHIP (ENSMNEG00000031761) #17	ENSMNEG00000031612	ANAPC10 (ENSMNEG00000032727) #18	ENSMNEG00000006010	ABCE1 (ENSMNEG00000030227) #19	OTUD4 (ENSMNEG00000027757) #20	ENSMNEG00000028387	SMAD1 (ENSMNEG00000026959) #22	MMAA (ENSMNEG00000034928) #23	ENSMNEG00000034188 #24	C4orf51 (ENSMNEG00000035392) #25	ZNF827 (ENSMNEG00000002738) #26	LSM6 (ENSMNEG00000034820) #27	REELD1 (ENSMNEG00000028815) #28	SLC10A7 (ENSMNEG00000033881) #29	POU4F2 (ENSMNEG00000036356) #30	TTC29 (ENSMNEG00000034118) #31	ENSMNEG00000025155	EDNRA (ENSMNEG00000002624) #32	TMEM184C (ENSMNEG00000029579) #33	PRMT9 (ENSMNEG00000031467) #34	ARHGAP10 (ENSMNEG00000045536) #36	NR3C2 (ENSMNEG00000042813) #37
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00390000003582.e.c.c.b	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00390000001958.t.a.h	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089.c #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.b.b	ENSGT00940000154978.i.b #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT00940000153314.a.a.l.b	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37
Rhesus	MODERN SPECIES	15	RNF150 (ENSMMUG00000010444)	ZNF330 (ENSMMUG00000060157)	IL15 (ENSMMUG00000019092)	INPP4B (ENSMMUG00000003697)	USP38 (ENSMMUG00000000827) #7	GAB1 (ENSMMUG00000000828) #8	SMARCA5 (ENSMMUG00000000829) #10	FREM3 (ENSMMUG00000003319) #11	ENSMMUG00000044429 #16	ENSMMUG00000014173	HHIP (ENSMMUG00000007968) #17	ANAPC10 (ENSMMUG00000004432) #18	ABCE1 (ENSMMUG00000004433) #19	OTUD4 (ENSMMUG00000004437) #20	ENSMMUG00000064578	SMAD1 (ENSMMUG00000018384) #22	MMAA (ENSMMUG00000005382) #23	C5H4orf51 (ENSMMUG00000039875) #25	ZNF827 (ENSMMUG00000005380) #26	ENSMMUG00000050323	LSM6 (ENSMMUG00000057637) #27	REELD1 (ENSMMUG00000063504) #28	SLC10A7 (ENSMMUG00000005522) #29	ENSMMUG00000062629	POU4F2 (ENSMMUG00000053730) #30	TTC29 (ENSMMUG00000013816) #31	ENSMMUG00000062288	EDNRA (ENSMMUG00000003659) #32	ENSMMUG00000063624	TMEM184C (ENSMMUG00000004977) #33	PRMT9 (ENSMMUG00000004979) #34
Crab-eating macaque	MODERN SPECIES	15	ZNF330 (ENSMFAG00000030809)	IL15 (ENSMFAG00000043515)	INPP4B (ENSMFAG00000004754)	ENSMFAG00000048249	USP38 (ENSMFAG00000031506) #7	GAB1 (ENSMFAG00000044011) #8	SMARCA5 (ENSMFAG00000043649) #10	FREM3 (ENSMFAG00000038207) #11	ENSMFAG00000003962 #16	HHIP (ENSMFAG00000040378) #17	ENSMFAG00000053399	ANAPC10 (ENSMFAG00000001142) #18	ABCE1 (ENSMFAG00000038310) #19	OTUD4 (ENSMFAG00000045984) #20	ENSMFAG00000058203	SMAD1 (ENSMFAG00000037774) #22	MMAA (ENSMFAG00000032212) #23	ENSMFAG00000050038	C4orf51 (ENSMFAG00000062382) #25	ZNF827 (ENSMFAG00000038497) #26	ENSMFAG00000065069	LSM6 (ENSMFAG00000033073) #27	REELD1 (ENSMFAG00000035931) #28	SLC10A7 (ENSMFAG00000005395) #29	POU4F2 (ENSMFAG00000041516) #30	ENSMFAG00000052355	ENSMFAG00000050706	TTC29 (ENSMFAG00000046354) #31	ENSMFAG00000059767	EDNRA (ENSMFAG00000033903) #32	TMEM184C (ENSMFAG00000039107) #33
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722 #18	ENSGT00390000015089.c #19	ENSGT00940000160512 #20	ENSGT00390000002615.o.b	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.i.b #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT00940000153314.a.a.l.b	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Cercopithecinae_d	ANCESTRAL SPECIES	21	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722 #18	ENSGT00390000015089.c #19	ENSGT00940000160512 #20	ENSGT00390000002615.o.b	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.i.b #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT00940000153314.a.a.l.b	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00910000148727	ENSGT00940000159333 #37
Drill	MODERN SPECIES	945					USP38 (ENSMLEG00000035914) #7	GAB1 (ENSMLEG00000032401) #8	SMARCA5 (ENSMLEG00000042393) #10	FREM3 (ENSMLEG00000029008) #11	ENSMLEG00000029837 #16	HHIP (ENSMLEG00000029460) #17	ENSMLEG00000036343	ANAPC10 (ENSMLEG00000041302) #18	ABCE1 (ENSMLEG00000038260) #19	OTUD4 (ENSMLEG00000019778) #20	ENSMLEG00000029260	SMAD1 (ENSMLEG00000033974) #22	MMAA (ENSMLEG00000025474) #23	C4orf51 (ENSMLEG00000037874) #25	ZNF827 (ENSMLEG00000032085) #26	LSM6 (ENSMLEG00000035153) #27	REELD1 (ENSMLEG00000039176) #28	SLC10A7 (ENSMLEG00000028642) #29
Sooty mangabey	MODERN SPECIES	575	RNF150 (ENSCATG00000036670)	ZNF330 (ENSCATG00000035879)	IL15 (ENSCATG00000042052)	INPP4B (ENSCATG00000042835)	USP38 (ENSCATG00000040394) #7	GAB1 (ENSCATG00000018732) #8	SMARCA5 (ENSCATG00000044917) #10	FREM3 (ENSCATG00000039679) #11	ENSCATG00000036237 #16	HHIP (ENSCATG00000035139) #17	ENSCATG00000034430	ANAPC10 (ENSCATG00000038918) #18	ABCE1 (ENSCATG00000036545) #19	OTUD4 (ENSCATG00000030428) #20	ENSCATG00000044949	SMAD1 (ENSCATG00000040644) #22	MMAA (ENSCATG00000031114) #23	C4orf51 (ENSCATG00000019996) #25	ZNF827 (ENSCATG00000042669) #26	ENSCATG00000016631	LSM6 (ENSCATG00000002770) #27	REELD1 (ENSCATG00000038340) #28	SLC10A7 (ENSCATG00000038830) #29	POU4F2 (ENSCATG00000035415) #30	TTC29 (ENSCATG00000021611) #31	EDNRA (ENSCATG00000041941) #32	TMEM184C (ENSCATG00000044287) #33	PRMT9 (ENSCATG00000025314) #34	ARHGAP10 (ENSCATG00000029679) #36	ENSCATG00000029475	NR3C2 (ENSCATG00000031040) #37
Olive baboon	MODERN SPECIES	13	INPP4B (ENSPANG00000009842)	USP38 (ENSPANG00000008197) #7	GAB1 (ENSPANG00000009676) #8	SMARCA5 (ENSPANG00000001175) #10	FREM3 (ENSPANG00000006696) #11	ENSPANG00000021918 #16	ENSPANG00000044664	ENSPANG00000046087	ENSPANG00000045820	HHIP (ENSPANG00000012434) #17	ENSPANG00000048321	ANAPC10 (ENSPANG00000004188) #18	ABCE1 (ENSPANG00000005888) #19	OTUD4 (ENSPANG00000002435) #20	ENSPANG00000038099	SMAD1 (ENSPANG00000016688) #22	MMAA (ENSPANG00000010647) #23	C4orf51 (ENSPANG00000020589) #25	ZNF827 (ENSPANG00000010646) #26	ENSPANG00000031057	LSM6 (ENSPANG00000006552) #27	REELD1 (ENSPANG00000019816) #28	SLC10A7 (ENSPANG00000019495) #29	POU4F2 (ENSPANG00000045314) #30	TTC29 (ENSPANG00000004758) #31	ENSPANG00000038735	EDNRA (ENSPANG00000006372) #32	TMEM184C (ENSPANG00000005233) #33	PRMT9 (ENSPANG00000019539) #34	ARHGAP10 (ENSPANG00000025442) #36	NR3C2 (ENSPANG00000004756) #37
Vervet Monkey	MODERN SPECIES	26	UCP1 (ENSCSAG00000003508)	TBC1D9 (ENSCSAG00000003505)	ENSCSAG00000000390	ZNF330 (ENSCSAG00000003500)	IL15 (ENSCSAG00000003496)	INPP4B (ENSCSAG00000003489)	USP38 (ENSCSAG00000003455) #7	GAB1 (ENSCSAG00000003452) #8	SMARCA5 (ENSCSAG00000003448) #10	FREM3 (ENSCSAG00000003444) #11	ENSCSAG00000003442 #16	HHIP (ENSCSAG00000003439) #17	ANAPC10 (ENSCSAG00000003438) #18	ABCE1 (ENSCSAG00000003437) #19	OTUD4 (ENSCSAG00000003435) #20	SMAD1 (ENSCSAG00000003430) #22	MMAA (ENSCSAG00000003428) #23	C4orf51 (ENSCSAG00000003424) #25	ZNF827 (ENSCSAG00000003422) #26	LSM6 (ENSCSAG00000003421) #27	ENSCSAG00000003416	SLC10A7 (ENSCSAG00000003414) #29	POU4F2 (ENSCSAG00000003411) #30	TTC29 (ENSCSAG00000003409) #31	EDNRA (ENSCSAG00000003394) #32	TMEM184C (ENSCSAG00000003385) #33	PRMT9 (ENSCSAG00000003376) #34	ARHGAP10 (ENSCSAG00000003372) #36	ENSCSAG00000003366	DCLK2 (ENSCSAG00000003362)	ENSCSAG00000003358
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00830000128422.b	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722.`b.a #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.h.b #27	ENSGT00940000154978.h.a #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201.g.b #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Cebidae	ANCESTRAL SPECIES	4	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00830000128422.b	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722.`b.a #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.h.b #27	ENSGT00940000154978.h.a #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201.g.b #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Cebidae_a	ANCESTRAL SPECIES	49	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00830000128422.b	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722.`b.a #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.g #27	ENSGT00940000154978.h.a #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201.g.b #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Bolivian squirrel monkey	MODERN SPECIES	68	TBC1D9 (ENSSBOG00000033747)	RNF150 (ENSSBOG00000021561)	ZNF330 (ENSSBOG00000033260)	IL15 (ENSSBOG00000023289)	INPP4B (ENSSBOG00000026274)	ENSSBOG00000029349	USP38 (ENSSBOG00000029166) #7	GAB1 (ENSSBOG00000036042) #8	SMARCA5 (ENSSBOG00000036257) #10	FREM3 (ENSSBOG00000024738) #11	ENSSBOG00000031076 #16	HHIP (ENSSBOG00000031611) #17	ANAPC10 (ENSSBOG00000028340) #18	ABCE1 (ENSSBOG00000026731) #19	OTUD4 (ENSSBOG00000026181) #20	SMAD1 (ENSSBOG00000032640) #22	MMAA (ENSSBOG00000024471) #23	C4orf51 (ENSSBOG00000033422) #25	ZNF827 (ENSSBOG00000021214) #26	ENSSBOG00000020157	ENSSBOG00000021229 #27	REELD1 (ENSSBOG00000016008) #28	SLC10A7 (ENSSBOG00000026776) #29	POU4F2 (ENSSBOG00000029758) #30	TTC29 (ENSSBOG00000018366) #31	EDNRA (ENSSBOG00000034230) #32	ENSSBOG00000024941 #33	PRMT9 (ENSSBOG00000030455) #34	ARHGAP10 (ENSSBOG00000026002) #36	NR3C2 (ENSSBOG00000020377) #37	ENSSBOG00000023349
Capuchin	MODERN SPECIES	4	INPP4B (ENSCCAG00000036276)	ENSCCAG00000017228	ENSCCAG00000031159	USP38 (ENSCCAG00000036444) #7	ENSCCAG00000017579	GAB1 (ENSCCAG00000027991) #8	SMARCA5 (ENSCCAG00000027215) #10	FREM3 (ENSCCAG00000027764) #11	ENSCCAG00000035001 #16	HHIP (ENSCCAG00000026649) #17	ANAPC10 (ENSCCAG00000022970) #18	ENSCCAG00000021838	ABCE1 (ENSCCAG00000022952) #19	OTUD4 (ENSCCAG00000019901) #20	ENSCCAG00000035581	SMAD1 (ENSCCAG00000031698) #22	MMAA (ENSCCAG00000016061) #23	C4orf51 (ENSCCAG00000028054) #25	ZNF827 (ENSCCAG00000029509) #26	LSM6 (ENSCCAG00000036437) #27	REELD1 (ENSCCAG00000022602) #28	SLC10A7 (ENSCCAG00000029664) #29	POU4F2 (ENSCCAG00000024204) #30	TTC29 (ENSCCAG00000032385) #31	EDNRA (ENSCCAG00000035638) #32	ENSCCAG00000037481 #33	PRMT9 (ENSCCAG00000022722) #34	ARHGAP10 (ENSCCAG00000021739) #36	NR3C2 (ENSCCAG00000035976) #37	IQCM (ENSCCAG00000032629)	DCLK2 (ENSCCAG00000026750)
Marmoset	MODERN SPECIES	15	USP38 (ENSCJAG00000002831) #7	ENSCJAG00000064145	ENSCJAG00000085872	GAB1 (ENSCJAG00000002803) #8	SMARCA5 (ENSCJAG00000002735) #10	FREM3 (ENSCJAG00000002729) #11	ENSCJAG00000086880	ENSCJAG00000002707 #16	HHIP (ENSCJAG00000002666) #17	ENSCJAG00000085953	ANAPC10 (ENSCJAG00000002663) #18	ABCE1 (ENSCJAG00000002636) #19	OTUD4 (ENSCJAG00000002563) #20	ENSCJAG00000068375	ENSCJAG00000071603	SMAD1 (ENSCJAG00000002542) #22	ENSCJAG00000054004	ENSCJAG00000053976	MMAA (ENSCJAG00000002525) #23	ENSCJAG00000079277	C4orf51 (ENSCJAG00000002521) #25	ZNF827 (ENSCJAG00000002484) #26	ENSCJAG00000002482 #27	REELD1 (ENSCJAG00000046646) #28	POU4F2 (ENSCJAG00000002462) #30	SLC10A7 (ENSCJAG00000034934) #29	TTC29 (ENSCJAG00000002445) #31	ENSCJAG00000079464	EDNRA (ENSCJAG00000002424) #32	TMEM184C (ENSCJAG00000002418) #33	PRMT9 (ENSCJAG00000002411) #34
Mas night monkey	MODERN SPECIES	1091				IL15 (ENSANAG00000022052)	INPP4B (ENSANAG00000026584)	ENSANAG00000022060	ENSANAG00000022956	USP38 (ENSANAG00000027226) #7	GAB1 (ENSANAG00000029852) #8	SMARCA5 (ENSANAG00000019345) #10	ENSANAG00000030304 #16	HHIP (ENSANAG00000029482) #17	ENSANAG00000033809 #18	ENSANAG00000023180 #19	OTUD4 (ENSANAG00000025997) #20	SMAD1 (ENSANAG00000035908) #22	MMAA (ENSANAG00000027872) #23	C4orf51 (ENSANAG00000025562) #25	ZNF827 (ENSANAG00000030225) #26	ENSANAG00000030568 #27	REELD1 (ENSANAG00000025603) #28	SLC10A7 (ENSANAG00000025194) #29	POU4F2 (ENSANAG00000032317) #30	TTC29 (ENSANAG00000035099) #31	ENSANAG00000021835	EDNRA (ENSANAG00000029868) #32	ENSANAG00000020376 #33	PRMT9 (ENSANAG00000020504) #34
Tarsier	MODERN SPECIES	6814													ANAPC10 (ENSTSYG00000036972) #18	ABCE1 (ENSTSYG00000011352) #19	OTUD4 (ENSTSYG00000033714) #20	SMAD1 (ENSTSYG00000000913) #22	MMAA (ENSTSYG00000000835) #23
Strepsirrhini	ANCESTRAL SPECIES	32	ENSGT00910000148499	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Lemuriformes	ANCESTRAL SPECIES	38	ENSGT00910000148499	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.n #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Lemuriformes_a	ANCESTRAL SPECIES	61	ENSGT00910000148499	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.n #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Coquerels sifaka	MODERN SPECIES	801																SMAD1 (ENSPCOG00000013650) #22	MMAA (ENSPCOG00000015715) #23	C4orf51 (ENSPCOG00000017613) #25	ZNF827 (ENSPCOG00000024525) #26	LSM6 (ENSPCOG00000013899) #27	REELD1 (ENSPCOG00000018399) #28	SLC10A7 (ENSPCOG00000016033) #29	POU4F2 (ENSPCOG00000011568) #30	TTC29 (ENSPCOG00000025818) #31	ENSPCOG00000010515	EDNRA (ENSPCOG00000027555) #32	TMEM184C (ENSPCOG00000025275) #33	ENSPCOG00000027630 #35	ARHGAP10 (ENSPCOG00000027182) #36	NR3C2 (ENSPCOG00000022854) #37	IQCM (ENSPCOG00000026456)
Greater bamboo lemur	MODERN SPECIES	559					IL15 (ENSPSMG00000016752)	INPP4B (ENSPSMG00000016845)	USP38 (ENSPSMG00000016880) #7	GAB1 (ENSPSMG00000016944) #8	SMARCA5 (ENSPSMG00000017072) #10	FREM3 (ENSPSMG00000017259) #11	ENSPSMG00000017284 #16	HHIP (ENSPSMG00000017317) #17	ANAPC10 (ENSPSMG00000017344) #18	ABCE1 (ENSPSMG00000017393) #19	OTUD4 (ENSPSMG00000017444) #20	SMAD1 (ENSPSMG00000017518) #22	MMAA (ENSPSMG00000017593) #23	C4orf51 (ENSPSMG00000017600) #25	ZNF827 (ENSPSMG00000017648) #26
Mouse lemur	MODERN SPECIES	5	TBC1D9 (ENSMICG00000009012)	RNF150 (ENSMICG00000009057)	ENSMICG00000044516	ZNF330 (ENSMICG00000027897)	IL15 (ENSMICG00000003154)	INPP4B (ENSMICG00000006762)	USP38 (ENSMICG00000035652) #7	GAB1 (ENSMICG00000009956) #8	SMARCA5 (ENSMICG00000003971) #10	FREM3 (ENSMICG00000046112) #11	ENSMICG00000033671	HHIP (ENSMICG00000003993) #17	ANAPC10 (ENSMICG00000048106) #18	ABCE1 (ENSMICG00000015343) #19	OTUD4 (ENSMICG00000031430) #20	SMAD1 (ENSMICG00000000562) #22	MMAA (ENSMICG00000000564) #23	C4orf51 (ENSMICG00000045099) #25	ZNF827 (ENSMICG00000000567) #26	LSM6 (ENSMICG00000042599) #27	REELD1 (ENSMICG00000043534) #28	SLC10A7 (ENSMICG00000000572) #29	POU4F2 (ENSMICG00000034755) #30	TTC29 (ENSMICG00000036587) #31	EDNRA (ENSMICG00000000581) #32	TMEM184C (ENSMICG00000000582) #33	PRMT9 (ENSMICG00000000584) #34	ARHGAP10 (ENSMICG00000000588) #36	NR3C2 (ENSMICG00000041449) #37	ENSMICG00000027816	IQCM (ENSMICG00000039098)
Bushbaby	MODERN SPECIES	156	TBC1D9 (ENSOGAG00000006809)	ENSOGAG00000027660	RNF150 (ENSOGAG00000006816)	ZNF330 (ENSOGAG00000011993)	IL15 (ENSOGAG00000011090)	ENSOGAG00000011094	ENSOGAG00000031567	USP38 (ENSOGAG00000003985) #7	GAB1 (ENSOGAG00000003737) #8	SMARCA5 (ENSOGAG00000009702) #10	FREM3 (ENSOGAG00000030589) #11	HHIP (ENSOGAG00000006900) #17	ANAPC10 (ENSOGAG00000006902) #18	ABCE1 (ENSOGAG00000006906) #19	OTUD4 (ENSOGAG00000006907) #20	SMAD1 (ENSOGAG00000000150) #22	MMAA (ENSOGAG00000012507) #23	ZNF827 (ENSOGAG00000005635) #26	ENSOGAG00000026665 #27	SLC10A7 (ENSOGAG00000008690) #29	POU4F2 (ENSOGAG00000028626) #30	TTC29 (ENSOGAG00000010351) #31	EDNRA (ENSOGAG00000015817) #32	TMEM184C (ENSOGAG00000015819) #33	PRMT9 (ENSOGAG00000015825) #34	ENSOGAG00000014000 #36	NR3C2 (ENSOGAG00000014008) #37	ENSOGAG00000033581	DCLK2 (ENSOGAG00000003223)	ENSOGAG00000003228	MAB21L2 (ENSOGAG00000029639)
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Tree shrew	MODERN SPECIES	3698																SMAD1 (ENSTBEG00000016459) #22	MMAA (ENSTBEG00000017051) #23	ZNF827 (ENSTBEG00000017519) #26
Glires	ANCESTRAL SPECIES	8	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Lagomorpha	ANCESTRAL SPECIES	69	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a	ENSGT00940000154778
Pika	MODERN SPECIES	3298																SMAD1 (ENSOPRG00000012775) #22
Rabbit	MODERN SPECIES	6	ENSOCUG00000036398	INPP4B (ENSOCUG00000005896)	ENSOCUG00000033027	USP38 (ENSOCUG00000011524) #7	GAB1 (ENSOCUG00000003271) #8	SMARCA5 (ENSOCUG00000013042) #10	FREM3 (ENSOCUG00000017497) #11	ENSOCUG00000022208	ENSOCUG00000038022	ENSOCUG00000025017	ENSOCUG00000022002	HHIP (ENSOCUG00000004959) #17	ANAPC10 (ENSOCUG00000001819) #18	ENSOCUG00000001821 #19	OTUD4 (ENSOCUG00000014569) #20	SMAD1 (ENSOCUG00000017920) #22	MMAA (ENSOCUG00000016139) #23	ZNF827 (ENSOCUG00000002055) #26	LSM6 (ENSOCUG00000017495) #27	REELD1 (ENSOCUG00000034608) #28	SLC10A7 (ENSOCUG00000012552) #29	POU4F2 (ENSOCUG00000012636) #30	TTC29 (ENSOCUG00000021290) #31	ENSOCUG00000031243	EDNRA (ENSOCUG00000001250) #32	TMEM184C (ENSOCUG00000001732) #33	PRMT9 (ENSOCUG00000003110) #34	ARHGAP10 (ENSOCUG00000003124) #36	NR3C2 (ENSOCUG00000003137) #37	ENSOCUG00000025176	IQCM (ENSOCUG00000027563)
Rodentia	ANCESTRAL SPECIES	13	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Rodentia_A	ANCESTRAL SPECIES	24	ENSGT00940000160382	ENSGT00910000148499	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Sciuridae	ANCESTRAL SPECIES	38	ENSGT00910000148499	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00960000191551	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Marmotini	ANCESTRAL SPECIES	45	ENSGT00910000148499	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00960000191551	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a	ENSGT00940000154778
Marmotini_b	ANCESTRAL SPECIES	115	ENSGT00910000148499	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00960000191551	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Arctic ground squirrel	MODERN SPECIES	107					USP38 (ENSUPAG00010000887) #7	GAB1 (ENSUPAG00010000769) #8	ENSUPAG00010000759	SMARCA5 (ENSUPAG00010000746) #10	FREM3 (ENSUPAG00010000720) #11	ENSUPAG00010000702	HHIP (ENSUPAG00010000675) #17	ANAPC10 (ENSUPAG00010000613) #18	ABCE1 (ENSUPAG00010000589) #19	OTUD4 (ENSUPAG00010000528) #20	ENSUPAG00010000524	SMAD1 (ENSUPAG00010000470) #22	MMAA (ENSUPAG00010000442) #23	ZNF827 (ENSUPAG00010000383) #26	LSM6 (ENSUPAG00010000353) #27	REELD1 (ENSUPAG00010000334) #28	SLC10A7 (ENSUPAG00010000172) #29	POU4F2 (ENSUPAG00010000164) #30	ENSUPAG00010000156	EDNRA (ENSUPAG00010000137) #32	TMEM184C (ENSUPAG00010000108) #33	PRMT9 (ENSUPAG00010000015) #34	ARHGAP10 (ENSUPAG00010021983) #36	NR3C2 (ENSUPAG00010021967) #37
Squirrel	MODERN SPECIES	135	UCP1 (ENSSTOG00000003104)	TBC1D9 (ENSSTOG00000001453)	RNF150 (ENSSTOG00000029908)	ZNF330 (ENSSTOG00000002498)	IL15 (ENSSTOG00000005776)	INPP4B (ENSSTOG00000005582)	USP38 (ENSSTOG00000025902) #7	GAB1 (ENSSTOG00000027891) #8	SMARCA5 (ENSSTOG00000010683) #10	FREM3 (ENSSTOG00000026754) #11	HHIP (ENSSTOG00000006708) #17	ENSSTOG00000022563	ANAPC10 (ENSSTOG00000007739) #18	ABCE1 (ENSSTOG00000004621) #19	OTUD4 (ENSSTOG00000004649) #20	SMAD1 (ENSSTOG00000010836) #22	MMAA (ENSSTOG00000010843) #23	ZNF827 (ENSSTOG00000007761) #26	LSM6 (ENSSTOG00000002678) #27	ENSSTOG00000030757	SLC10A7 (ENSSTOG00000023850) #29	POU4F2 (ENSSTOG00000021113) #30	TTC29 (ENSSTOG00000003372) #31	EDNRA (ENSSTOG00000027041) #32	TMEM184C (ENSSTOG00000003964) #33	PRMT9 (ENSSTOG00000024013) #34	ARHGAP10 (ENSSTOG00000004020) #36	NR3C2 (ENSSTOG00000004069) #37	IQCM (ENSSTOG00000029868)
Alpin marmot	MODERN SPECIES	14	ZNF330 (ENSMMMG00000000807)	IL15 (ENSMMMG00000000844)	INPP4B (ENSMMMG00000000910)	ENSMMMG00000001088	ENSMMMG00000001108	USP38 (ENSMMMG00000001127) #7	GAB1 (ENSMMMG00000001157) #8	ENSMMMG00000001200	SMARCA5 (ENSMMMG00000001227) #10	FREM3 (ENSMMMG00000001322) #11	ENSMMMG00000001356	HHIP (ENSMMMG00000001370) #17	ANAPC10 (ENSMMMG00000001410) #18	ABCE1 (ENSMMMG00000001426) #19	OTUD4 (ENSMMMG00000001476) #20	SMAD1 (ENSMMMG00000001530) #22	MMAA (ENSMMMG00000001552) #23	ZNF827 (ENSMMMG00000001587) #26	LSM6 (ENSMMMG00000001638) #27	REELD1 (ENSMMMG00000001660) #28	SLC10A7 (ENSMMMG00000001688) #29	ENSMMMG00000001799	ENSMMMG00000001810	EDNRA (ENSMMMG00000001819) #32	TMEM184C (ENSMMMG00000001829) #33	PRMT9 (ENSMMMG00000001857) #34	ARHGAP10 (ENSMMMG00000001915) #36	NR3C2 (ENSMMMG00000002054) #37	DCLK2 (ENSMMMG00000002234)	LRBA (ENSMMMG00000002285)	MAB21L2 (ENSMMMG00000002553)
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	18	UCP1 (ENSSVLG00005007755)	TBC1D9 (ENSSVLG00005007825)	RNF150 (ENSSVLG00005007968)	ZNF330 (ENSSVLG00005008101)	IL15 (ENSSVLG00005008140)	INPP4B (ENSSVLG00005008272)	USP38 (ENSSVLG00005008534) #7	GAB1 (ENSSVLG00005008645) #8	SMARCA5 (ENSSVLG00005008713) #10	FREM3 (ENSSVLG00005008764) #11	ENSSVLG00005008869	HHIP (ENSSVLG00005009063) #17	ANAPC10 (ENSSVLG00005009144) #18	ENSSVLG00005009213 #19	ENSSVLG00005009329 #20	ENSSVLG00005009597 #22	ENSSVLG00005009634	MMAA (ENSSVLG00005009664) #23	C4orf51 (ENSSVLG00005009715) #25	ZNF827 (ENSSVLG00005009794) #26	LSM6 (ENSSVLG00005009971) #27	REELD1 (ENSSVLG00005010007) #28	SLC10A7 (ENSSVLG00005010105) #29	POU4F2 (ENSSVLG00005010171) #30	TTC29 (ENSSVLG00005010213) #31	EDNRA (ENSSVLG00005010545) #32	TMEM184C (ENSSVLG00005010646) #33	PRMT9 (ENSSVLG00005010674) #34	ARHGAP10 (ENSSVLG00005010815) #36	NR3C2 (ENSSVLG00005010872) #37	ENSSVLG00005011096
Eurasian red squirrel	MODERN SPECIES	133																ENSSVLG00005010534 #22	ENSSVLG00005010630
Hystricomorpha	ANCESTRAL SPECIES	38			ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00510000047351.b	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722.a.a #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b.d #32	ENSGT00940000155201.n #33	ENSGT00940000158472 #34	ENSGT00940000160382	ENSGT00940000156589	ENSGT00940000161998	ENSGT00950000182915.a.a.b	ENSGT00390000008828
Hystricomorpha_a	ANCESTRAL SPECIES	34	ENSGT00940000159333 #37	ENSGT00940000159559 #36	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00510000047351.b	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722.a.a #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b.d #32	ENSGT00940000155201.n #33	ENSGT00940000158472 #34	ENSGT00940000160382	ENSGT00940000156589	ENSGT00940000161998	ENSGT00950000182915.a.a.b	ENSGT00390000008828
Guinea pig	MODERN SPECIES	7	ARHGAP10 (ENSCPOG00000007759) #36	TBC1D9 (ENSCPOG00000007373)	RNF150 (ENSCPOG00000004096)	ZNF330 (ENSCPOG00000011875)	IL15 (ENSCPOG00000008232)	INPP4B (ENSCPOG00000026234)	USP38 (ENSCPOG00000008971) #7	GAB1 (ENSCPOG00000031770) #8	LRAT (ENSCPOG00000034177)	FREM3 (ENSCPOG00000038428) #11	HHIP (ENSCPOG00000023375) #17	ENSCPOG00000031256	ANAPC10 (ENSCPOG00000032592) #18	ABCE1 (ENSCPOG00000007367) #19	OTUD4 (ENSCPOG00000007371) #20	SMAD1 (ENSCPOG00000009073) #22	MMAA (ENSCPOG00000004149) #23	ZNF827 (ENSCPOG00000009087) #26	LSM6 (ENSCPOG00000032655) #27	SLC10A7 (ENSCPOG00000015391) #29	POU4F2 (ENSCPOG00000013770) #30	TTC29 (ENSCPOG00000007443) #31	ENSCPOG00000040663	EDNRA (ENSCPOG00000004559) #32	TMEM184C (ENSCPOG00000009210) #33	PRMT9 (ENSCPOG00000009218) #34	UCP1 (ENSCPOG00000001969)	ELMOD2 (ENSCPOG00000036772)	CLGN (ENSCPOG00000006963)	SCOC (ENSCPOG00000032760)	ENSCPOG00000001624
Hystricomorpha_b	ANCESTRAL SPECIES	75												ENSGT00940000158660 #17	ENSGT00390000013722.a.a #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b.d #32	ENSGT00940000155201.n #33	ENSGT00940000158472 #34	ENSGT00940000160382	ENSGT00940000156589	ENSGT00940000161998	ENSGT00950000182915.a.a.b	ENSGT00390000008828
Degu	MODERN SPECIES	268									LRAT (ENSODEG00000002847)	ENSODEG00000002796	HHIP (ENSODEG00000002779) #17	ENSODEG00000002748	ENSODEG00000002440 #18	ABCE1 (ENSODEG00000002420) #19	OTUD4 (ENSODEG00000002314) #20	SMAD1 (ENSODEG00000002259) #22	MMAA (ENSODEG00000002219) #23	ENSODEG00000002399 #26	ENSODEG00000002342 #26	ENSODEG00000002324	ENSODEG00000002307 #27	SLC10A7 (ENSODEG00000002245) #29	POU4F2 (ENSODEG00000002037) #30	TTC29 (ENSODEG00000002020) #31
Long-tailed chinchilla	MODERN SPECIES	135												HHIP (ENSCLAG00000004186) #17	ANAPC10 (ENSCLAG00000004271) #18	ABCE1 (ENSCLAG00000004343) #19	OTUD4 (ENSCLAG00000004554) #20	SMAD1 (ENSCLAG00000004941) #22	MMAA (ENSCLAG00000005007) #23	C4orf51 (ENSCLAG00000005155) #25	ZNF827 (ENSCLAG00000005326) #26	ENSCLAG00000005495 #27	SLC10A7 (ENSCLAG00000005576) #29	POU4F2 (ENSCLAG00000004187) #30	TTC29 (ENSCLAG00000004530) #31	EDNRA (ENSCLAG00000005819) #32	TMEM184C (ENSCLAG00000006100) #33	PRMT9 (ENSCLAG00000006351) #34	UCP1 (ENSCLAG00000007517)	ELMOD2 (ENSCLAG00000008217)	MGAT4D (ENSCLAG00000006558)	CLGN (ENSCLAG00000007242)	SCOC (ENSCLAG00000006150)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	DUPLICATION
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	25	DDHD2 (ENSHGLG00000003583)	ENSHGLG00000020025	BAG4 (ENSHGLG00000004123)	LSM1 (ENSHGLG00000048140)	STAR (ENSHGLG00000040613)	ASH2L (ENSHGLG00000002367)	EIF4EBP1 (ENSHGLG00000002957)	ADRB3 (ENSHGLG00000002989)	GOT1L1 (ENSHGLG00000045726)	ENSHGLG00000003171	BRF2 (ENSHGLG00000003639)	ADGRA2 (ENSHGLG00000003938)	PROSC (ENSHGLG00000041569)	ERLIN2 (ENSHGLG00000035041)	ZNF703 (ENSHGLG00000010999)	ENSHGLG00000007555 #22	KCNU1 (ENSHGLG00000015824)	ENSHGLG00000037018	UNC5D (ENSHGLG00000009719)	ENSHGLG00000036058	DUSP26 (ENSHGLG00000012175)	RNF122 (ENSHGLG00000035559)	TTI2 (ENSHGLG00000002506)	MAK16 (ENSHGLG00000002981)	ENSHGLG00000004478	FUT10 (ENSHGLG00000003149)	NRG1 (ENSHGLG00000004920)	ENSHGLG00000003390	WRN (ENSHGLG00000003638)	PURG (ENSHGLG00000003706)	ENSHGLG00000046666
Naked mole-rat female	MODERN SPECIES	31	ITM2A (ENSHGLG00000001163)	ENSHGLG00000001147	TBX22 (ENSHGLG00000001099)	ENSHGLG00000000868	TENT5D (ENSHGLG00000020434)	ENSHGLG00000041421	BRWD3 (ENSHGLG00000002063)	ENSHGLG00000037295	ENSHGLG00000007722	ENSHGLG00000007062	ENSHGLG00000020488	ENSHGLG00000020202	ENSHGLG00000005940	ENSHGLG00000050061	ENSHGLG00000050316	ENSHGLG00000040597 #22	ENSHGLG00000037398	RPS6KA6 (ENSHGLG00000004511)	HDX (ENSHGLG00000003945)	ENSHGLG00000045926	ENSHGLG00000035970	APOOL (ENSHGLG00000003635)	ENSHGLG00000003516	ZNF711 (ENSHGLG00000003254)	POF1B (ENSHGLG00000003095)	ENSHGLG00000033497	ENSHGLG00000041349	CHM (ENSHGLG00000002772)	DACH2 (ENSHGLG00000008869)	ENSHGLG00000020892	ENSHGLG00000034462
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	22	ENSHGLG00000049616	ENSHGLG00000001875 #7	ENSHGLG00000038593	ENSHGLG00000002344 #8	ENSHGLG00000032409 #33	LRAT (ENSHGLG00000045268)	ENSHGLG00000000458	ENSHGLG00000000499 #17	ENSHGLG00000001008	ENSHGLG00000041757	ENSHGLG00000048241	ANAPC10 (ENSHGLG00000038398) #18	ABCE1 (ENSHGLG00000001909) #19	ENSHGLG00000046999 #20	ENSHGLG00000050361	ENSHGLG00000000238 #22	MMAA (ENSHGLG00000043526) #23	ZNF827 (ENSHGLG00000002037) #26	ENSHGLG00000032143	ENSHGLG00000032652	LSM6 (ENSHGLG00000000205) #27	ENSHGLG00000041054 #29	ENSHGLG00000000312 #29	ENSHGLG00000038980	POU4F2 (ENSHGLG00000000719) #30	ENSHGLG00000047188 #31	ENSHGLG00000002125	ENSHGLG00000000819	ENSHGLG00000040760	ENSHGLG00000038230 #32	ENSHGLG00000000886 #32
Naked mole-rat female	MODERN SPECIES	5	INMT (ENSHGLG00000035929)	ENSHGLG00000049417	CRHR2 (ENSHGLG00000018699)	GARS1 (ENSHGLG00000016342)	GGCT (ENSHGLG00000034422)	ENSHGLG00000032561	ZNRF2 (ENSHGLG00000039084)	ENSHGLG00000016122	MTURN (ENSHGLG00000044384)	ENSHGLG00000011844	PLEKHA8 (ENSHGLG00000005404)	ENSHGLG00000007305	FKBP14 (ENSHGLG00000006567)	SCRN1 (ENSHGLG00000008257)	PRR15 (ENSHGLG00000047965)	ENSHGLG00000017765 #22	CHN2 (ENSHGLG00000033880)	CPVL (ENSHGLG00000016195)	TRIL (ENSHGLG00000037451)	CREB5 (ENSHGLG00000018417)	ENSHGLG00000016063	JAZF1 (ENSHGLG00000049016)	ENSHGLG00000016256	ENSHGLG00000047390	HIBADH (ENSHGLG00000005354)	EVX1 (ENSHGLG00000005868)	HOXA13 (ENSHGLG00000039960)	HOXA11 (ENSHGLG00000009266)	HOXA10 (ENSHGLG00000050027)	HOXA9 (ENSHGLG00000045326)	ENSHGLG00000043027
Naked mole-rat female	MODERN SPECIES	28	ENSHGLG00000047272	ENSHGLG00000035456	GPD1L (ENSHGLG00000046132)	OSBPL10 (ENSHGLG00000003154)	ENSHGLG00000003049	ENSHGLG00000048329	ENSHGLG00000007708	ENSHGLG00000038856	GADL1 (ENSHGLG00000002767)	ENSHGLG00000048123	ZCWPW2 (ENSHGLG00000001751)	RBMS3 (ENSHGLG00000002170)	AZI2 (ENSHGLG00000001682)	ENSHGLG00000046739	ENSHGLG00000003844	ENSHGLG00000045904 #22	ENSHGLG00000042043	EOMES (ENSHGLG00000002232)	ENSHGLG00000046465	SLC4A7 (ENSHGLG00000002019)	ENSHGLG00000001531	ENSHGLG00000035829	LRRC3B (ENSHGLG00000035622)	ENSHGLG00000041224	ENSHGLG00000041249	ENSHGLG00000045324	OXSM (ENSHGLG00000001247)	NGLY1 (ENSHGLG00000001215)	ENSHGLG00000045011	TOP2B (ENSHGLG00000001067)	ENSHGLG00000045457
Rodentia_B	ANCESTRAL SPECIES	30	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a	ENSGT00940000154778
Myomorpha	ANCESTRAL SPECIES	41	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a	ENSGT00940000154778
Muroidea	ANCESTRAL SPECIES	56	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000161129
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000161129
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000161129	ENSGT01050000244824.G	ENSGT00390000017673.b
Prairie vole	MODERN SPECIES	12	Pdf (ENSMOCG00000022333)	Cog8 (ENSMOCG00000001920)	Nip7 (ENSMOCG00000020110)	Tmed6 (ENSMOCG00000017073)	Terf2 (ENSMOCG00000009801)	Cyb5b (ENSMOCG00000009682)	Nfat5 (ENSMOCG00000003169)	ENSMOCG00000020056	ENSMOCG00000016986 #10	ENSMOCG00000011000	Hhip (ENSMOCG00000006070) #17	ENSMOCG00000020653	Anapc10 (ENSMOCG00000017245) #18	Abce1 (ENSMOCG00000013213) #19	Otud4 (ENSMOCG00000012639) #20	Smad1 (ENSMOCG00000002828) #22	Mmaa (ENSMOCG00000000542) #23	1700011L22Rik (ENSMOCG00000010556) #25	Zfp827 (ENSMOCG00000020399) #26	ENSMOCG00000002657	Lsm6 (ENSMOCG00000020049) #27	Slc10a7 (ENSMOCG00000007838) #29	ENSMOCG00000017327	Pou4f2 (ENSMOCG00000014811) #30	Ttc29 (ENSMOCG00000010925) #31	ENSMOCG00000018841	ENSMOCG00000010337	Ednra (ENSMOCG00000017745) #32	ENSMOCG00000016788	Rasd2 (ENSMOCG00000014090)	Hmox1 (ENSMOCG00000005130)
Northern American deer mouse	MODERN SPECIES	18	ENSPEMG00000026256	ENSPEMG00000030162	Rnf150 (ENSPEMG00000008599)	Zfp330 (ENSPEMG00000022167)	Il15 (ENSPEMG00000029894)	Inpp4b (ENSPEMG00000005790)	Usp38 (ENSPEMG00000017993) #7	Gab1 (ENSPEMG00000011664) #8	Smarca5 (ENSPEMG00000008060) #10	Hhip (ENSPEMG00000020265) #17	ENSPEMG00000027237	Anapc10 (ENSPEMG00000020210) #18	ENSPEMG00000025681	Abce1 (ENSPEMG00000020086) #19	Otud4 (ENSPEMG00000000203) #20	Smad1 (ENSPEMG00000018411) #22	Mmaa (ENSPEMG00000017778) #23	1700011L22Rik (ENSPEMG00000017156) #25	Zfp827 (ENSPEMG00000014314) #26	Lsm6 (ENSPEMG00000012410) #27	Slc10a7 (ENSPEMG00000009109) #29	ENSPEMG00000006082	Pou4f2 (ENSPEMG00000027953) #30	Ttc29 (ENSPEMG00000018461) #31	Ednra (ENSPEMG00000013386) #32	ENSPEMG00000023580	ENSPEMG00000027614	ENSPEMG00000029203 #36	ENSPEMG00000017170 #36	Nr3c2 (ENSPEMG00000013692) #37	Iqcm (ENSPEMG00000018718)
Cricetinae	ANCESTRAL SPECIES	40	ENSGT00950000182915.a.a.b	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000161129
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	87																ENSCGRG00001012305 #22
Chinese hamster chok1gshd	MODERN SPECIES	89																ENSCGRG00001013039 #22
Chinese hamster chok1gshd	MODERN SPECIES	348																ENSCGRG00001012380 #22
Chinese hamster chok1gshd	MODERN SPECIES	226	ENSCGRG00001016473	ENSCGRG00001022655	Rnf150 (ENSCGRG00001022877)	ENSCGRG00001023417	ENSCGRG00001014103	Zfp330 (ENSCGRG00001001331)	Il15 (ENSCGRG00001010668)	Inpp4b (ENSCGRG00001016742)	Usp38 (ENSCGRG00001008922) #7	Gab1 (ENSCGRG00001010681) #8	Smarca5 (ENSCGRG00001012719) #10	Hhip (ENSCGRG00001017452) #17	ENSCGRG00001017973 #18	Abce1 (ENSCGRG00001000394) #19	Otud4 (ENSCGRG00001004451) #20	ENSCGRG00001006596 #22	Mmaa (ENSCGRG00001013056) #23	ENSCGRG00001014492	1700011L22Rik (ENSCGRG00001015849) #25	Zfp827 (ENSCGRG00001020514) #26	Lsm6 (ENSCGRG00001017142) #27	Slc10a7 (ENSCGRG00001018803) #29	ENSCGRG00001013716	Pou4f2 (ENSCGRG00001001534) #30	Ttc29 (ENSCGRG00001003512) #31	Ednra (ENSCGRG00001005013) #32	ENSCGRG00001005844 #33	Prmt9 (ENSCGRG00001012400) #34	Arhgap10 (ENSCGRG00001015571) #36	Nr3c2 (ENSCGRG00001008894) #37	Iqcm (ENSCGRG00001013562)
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	15																ENSCGRG00001001551 #22	ENSCGRG00001012563	ENSCGRG00001001753	ENSCGRG00001001885
Chinese hamster chok1gshd	MODERN SPECIES	64																ENSCGRG00001002003 #22
Golden Hamster	MODERN SPECIES	692	Mgat4d (ENSMAUG00000008813)	Elmod2 (ENSMAUG00000017426)	Ucp1 (ENSMAUG00000001700)	Tbc1d9 (ENSMAUG00000007342)	ENSMAUG00000000314	ENSMAUG00000003125	Inpp4b (ENSMAUG00000006303)	Usp38 (ENSMAUG00000015498) #7	Gab1 (ENSMAUG00000009430) #8	Smarca5 (ENSMAUG00000015902) #10	Hhip (ENSMAUG00000012341) #17	ENSMAUG00000014510 #18	ENSMAUG00000006512 #19	Otud4 (ENSMAUG00000000475) #20	ENSMAUG00000020567	Smad1 (ENSMAUG00000020113) #22	Mmaa (ENSMAUG00000014130) #23	1700011L22Rik (ENSMAUG00000016201) #25	Zfp827 (ENSMAUG00000012963) #26	Lsm6 (ENSMAUG00000014938) #27	Slc10a7 (ENSMAUG00000019575) #29	ENSMAUG00000016659	Pou4f2 (ENSMAUG00000018882) #30	Ttc29 (ENSMAUG00000010655) #31	Ednra (ENSMAUG00000016677) #32	ENSMAUG00000008780 #33	Prmt9 (ENSMAUG00000012249) #34	Arhgap10 (ENSMAUG00000018597) #36	ENSMAUG00000020122	Nr3c2 (ENSMAUG00000005964) #37	Iqcm (ENSMAUG00000018819)
Murinae	ANCESTRAL SPECIES	15	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000161129
Mus	ANCESTRAL SPECIES	6	ENSGT00860000135863	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000161129
Mus_A	ANCESTRAL SPECIES	8	ENSGT00860000135863	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000161129
Mus_B	ANCESTRAL SPECIES	6	ENSGT00860000135863	ENSGT00940000156171	ENSGT00390000017043.j	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000161129
Mus_C	ANCESTRAL SPECIES	5	ENSGT00860000135863	ENSGT00940000156171	ENSGT00390000017043.j	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000161129
spretus	MODERN SPECIES	17	Tbc1d9 (MGP_SPRETEiJ_G0032384)	MGP_SPRETEiJ_G0032383	Rnf150 (MGP_SPRETEiJ_G0032382)	MGP_SPRETEiJ_G0032381	Il15 (MGP_SPRETEiJ_G0032380)	Inpp4b (MGP_SPRETEiJ_G0032379)	Usp38 (MGP_SPRETEiJ_G0032378) #7	Gab1 (MGP_SPRETEiJ_G0032377) #8	Smarca5 (MGP_SPRETEiJ_G0032376) #10	Frem3 (MGP_SPRETEiJ_G0032375) #11	Gypa (MGP_SPRETEiJ_G0032374) #16	Hhip (MGP_SPRETEiJ_G0032373) #17	Anapc10 (MGP_SPRETEiJ_G0032372) #18	Abce1 (MGP_SPRETEiJ_G0032371) #19	Otud4 (MGP_SPRETEiJ_G0032370) #20	Smad1 (MGP_SPRETEiJ_G0032369) #22	Mmaa (MGP_SPRETEiJ_G0032368) #23	1700011L22Rik (MGP_SPRETEiJ_G0032367) #25	MGP_SPRETEiJ_G0032366 #26	Lsm6 (MGP_SPRETEiJ_G0032365) #27	Slc10a7 (MGP_SPRETEiJ_G0032364) #29	Pou4f2 (MGP_SPRETEiJ_G0032363) #30	Ttc29 (MGP_SPRETEiJ_G0032362) #31	Ednra (MGP_SPRETEiJ_G0032361) #32	Tmem184c (MGP_SPRETEiJ_G0032360) #33	Prmt9 (MGP_SPRETEiJ_G0032359) #34	Arhgap10 (MGP_SPRETEiJ_G0032358) #36	Nr3c2 (MGP_SPRETEiJ_G0032357) #37	Iqcm (MGP_SPRETEiJ_G0032356)	Rasd2 (MGP_SPRETEiJ_G0032355)	Mcm5 (MGP_SPRETEiJ_G0032354)
Steppe mouse	MODERN SPECIES	2958																Smad1 (ENSMSIG00000029263) #22	Mmaa (ENSMSIG00000029276) #23	1700011L22Rik (ENSMSIG00000029277) #25	Zfp827 (ENSMSIG00000029282) #26	ENSMSIG00000029296	ENSMSIG00000029299 #27	Slc10a7 (ENSMSIG00000029308) #29	ENSMSIG00000029365	Pou4f2 (ENSMSIG00000029369) #30	Ttc29 (ENSMSIG00000029371) #31
Mouse	MODERN SPECIES	17	Ucp1 (ENSMUSG00000031710)	Tbc1d9 (ENSMUSG00000031709)	Rnf150 (ENSMUSG00000047747)	Zfp330 (ENSMUSG00000031711)	Il15 (ENSMUSG00000031712)	Inpp4b (ENSMUSG00000037940)	Usp38 (ENSMUSG00000038250) #7	Gab1 (ENSMUSG00000031714) #8	Smarca5 (ENSMUSG00000031715) #10	Frem3 (ENSMUSG00000042353) #11	Gypa (ENSMUSG00000051839) #16	Hhip (ENSMUSG00000064325) #17	Anapc10 (ENSMUSG00000036977) #18	Abce1 (ENSMUSG00000058355) #19	Otud4 (ENSMUSG00000036990) #20	Smad1 (ENSMUSG00000031681) #22	Mmaa (ENSMUSG00000037022) #23	1700011L22Rik (ENSMUSG00000031682) #25	Zfp827 (ENSMUSG00000071064) #26	Lsm6 (ENSMUSG00000031683) #27	Slc10a7 (ENSMUSG00000031684) #29	Rbmxl1 (ENSMUSG00000037070)	Pou4f2 (ENSMUSG00000031688) #30	Ttc29 (ENSMUSG00000037101) #31	Ednra (ENSMUSG00000031616) #32	Tmem184c (ENSMUSG00000031617) #33	Prmt9 (ENSMUSG00000037134) #34	Arhgap10 (ENSMUSG00000037148) #36	Nr3c2 (ENSMUSG00000031618) #37	Iqcm (ENSMUSG00000031620)	Gm10358 (ENSMUSG00000110469)
Ryukyu mouse	MODERN SPECIES	17	Tbc1d9 (MGP_CAROLIEiJ_G0031264)	MGP_CAROLIEiJ_G0031263	Rnf150 (MGP_CAROLIEiJ_G0031262)	Zfp330 (MGP_CAROLIEiJ_G0031261)	Il15 (MGP_CAROLIEiJ_G0031260)	Inpp4b (MGP_CAROLIEiJ_G0031259)	Usp38 (MGP_CAROLIEiJ_G0031258) #7	Gab1 (MGP_CAROLIEiJ_G0031257) #8	MGP_CAROLIEiJ_G0031256 #10	Frem3 (MGP_CAROLIEiJ_G0031255) #11	Gypa (MGP_CAROLIEiJ_G0031254) #16	Hhip (MGP_CAROLIEiJ_G0031253) #17	Anapc10 (MGP_CAROLIEiJ_G0031252) #18	Abce1 (MGP_CAROLIEiJ_G0031251) #19	Otud4 (MGP_CAROLIEiJ_G0031250) #20	Smad1 (MGP_CAROLIEiJ_G0031249) #22	Mmaa (MGP_CAROLIEiJ_G0031248) #23	1700011L22Rik (MGP_CAROLIEiJ_G0031247) #25	MGP_CAROLIEiJ_G0031246 #26	Lsm6 (MGP_CAROLIEiJ_G0031245) #27	Slc10a7 (MGP_CAROLIEiJ_G0031244) #29	MGP_CAROLIEiJ_G0031243	Pou4f2 (MGP_CAROLIEiJ_G0031242) #30	Ttc29 (MGP_CAROLIEiJ_G0031241) #31	Ednra (MGP_CAROLIEiJ_G0031240) #32	Tmem184c (MGP_CAROLIEiJ_G0031239) #33	Prmt9 (MGP_CAROLIEiJ_G0031238) #34	Arhgap10 (MGP_CAROLIEiJ_G0031237) #36	Nr3c2 (MGP_CAROLIEiJ_G0031236) #37	Iqcm (MGP_CAROLIEiJ_G0031235)	Rasd2 (MGP_CAROLIEiJ_G0031234)
Shrew mouse	MODERN SPECIES	12	Tbc1d9 (MGP_PahariEiJ_G0022870)	MGP_PahariEiJ_G0022869	Rnf150 (MGP_PahariEiJ_G0022868)	Zfp330 (MGP_PahariEiJ_G0022867)	Il15 (MGP_PahariEiJ_G0022866)	Inpp4b (MGP_PahariEiJ_G0022865)	Usp38 (MGP_PahariEiJ_G0022864) #7	Gab1 (MGP_PahariEiJ_G0022863) #8	Smarca5 (MGP_PahariEiJ_G0022862) #10	MGP_PahariEiJ_G0022861 #11	Gypa (MGP_PahariEiJ_G0022860) #16	Hhip (MGP_PahariEiJ_G0022859) #17	Anapc10 (MGP_PahariEiJ_G0022858) #18	Abce1 (MGP_PahariEiJ_G0022857) #19	MGP_PahariEiJ_G0022856	Smad1 (MGP_PahariEiJ_G0022855) #22	Mmaa (MGP_PahariEiJ_G0022854) #23	1700011L22Rik (MGP_PahariEiJ_G0022853) #25	MGP_PahariEiJ_G0022852 #26	Lsm6 (MGP_PahariEiJ_G0022851) #27	Slc10a7 (MGP_PahariEiJ_G0022850) #29	MGP_PahariEiJ_G0022849	Pou4f2 (MGP_PahariEiJ_G0022848) #30	Ttc29 (MGP_PahariEiJ_G0022847) #31	Ednra (MGP_PahariEiJ_G0022846) #32	MGP_PahariEiJ_G0022845	Arhgap10 (MGP_PahariEiJ_G0022844) #36	Nr3c2 (MGP_PahariEiJ_G0022843) #37	MGP_PahariEiJ_G0022842	MGP_PahariEiJ_G0022841
Rat	MODERN SPECIES	10	Zfp330 (ENSRNOG00000003461)	LOC688712 (ENSRNOG00000033819)	Il15 (ENSRNOG00000003439)	Inpp4b (ENSRNOG00000018382)	AABR07043598.1 (ENSRNOG00000028320)	Usp38 (ENSRNOG00000026880) #7	Gab1 (ENSRNOG00000017879) #8	Smarca5 (ENSRNOG00000018149) #10	Frem3 (ENSRNOG00000039152) #11	ENSRNOG00000063111	Gypa (ENSRNOG00000062794)	Hhip (ENSRNOG00000018268) #17	Anapc10 (ENSRNOG00000018296) #18	Abce1 (ENSRNOG00000018345) #19	Otud4 (ENSRNOG00000018477) #20	Smad1 (ENSRNOG00000018483) #22	Mmaa (ENSRNOG00000011618) #23	LOC498933 (ENSRNOG00000011671) #25	Zfp827 (ENSRNOG00000011697) #26	Slc10a7 (ENSRNOG00000011991) #29	Rbmxl1 (ENSRNOG00000062375)	AABR07043626.1 (ENSRNOG00000033487)	Pou4f2 (ENSRNOG00000012167) #30	Ttc29 (ENSRNOG00000012342) #31	ENSRNOG00000062839	Ednra (ENSRNOG00000012721) #32	Tmem184c (ENSRNOG00000012860) #33	Prmt9 (ENSRNOG00000012928) #34	Arhgap10 (ENSRNOG00000013152) #36	LOC102552913 (ENSRNOG00000027022)	Nr3c2 (ENSRNOG00000034007) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	559													Anapc10 (ENSNGAG00000017656) #18	Abce1 (ENSNGAG00000016777) #19	Otud4 (ENSNGAG00000013072) #20	Smad1 (ENSNGAG00000011424) #22	Mmaa (ENSNGAG00000011018) #23	1700011L22Rik (ENSNGAG00000020603) #25	ENSNGAG00000020196 #26	ENSNGAG00000019778 #26	ENSNGAG00000019388	Lsm6 (ENSNGAG00000019116) #27	Slc10a7 (ENSNGAG00000016788) #29	ENSNGAG00000013094	Pou4f2 (ENSNGAG00000012905) #30	Ttc29 (ENSNGAG00000007831) #31	Ednra (ENSNGAG00000003931) #32
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	57	Gatb (ENSJJAG00000016979)	Fhip1a (ENSJJAG00000012235)	Sh3d19 (ENSJJAG00000022007)	Rps3a1 (ENSJJAG00000021259)	ENSJJAG00000009645	ENSJJAG00000023999	Mab21l2 (ENSJJAG00000009027)	ENSJJAG00000023104	Dclk2 (ENSJJAG00000021674)	Iqcm (ENSJJAG00000001722)	Nr3c2 (ENSJJAG00000014359) #37	Arhgap10 (ENSJJAG00000024127) #36	Prmt9 (ENSJJAG00000022258) #34	Hhip (ENSJJAG00000012058) #17	Otud4 (ENSJJAG00000011777) #20	ENSJJAG00000019141 #22	Mmaa (ENSJJAG00000012406) #23	ENSJJAG00000019609 #26	ENSJJAG00000013845 #27	Slc10a7 (ENSJJAG00000020694) #29	Pou4f2 (ENSJJAG00000022187) #30	ENSJJAG00000020665	Ttc29 (ENSJJAG00000021357) #31	Ednra (ENSJJAG00000019465) #32	ENSJJAG00000016555 #33	Smarca5 (ENSJJAG00000014965) #10	Gab1 (ENSJJAG00000023862) #8	ENSJJAG00000017034	Inpp4b (ENSJJAG00000011391)	Il15 (ENSJJAG00000000182)	ENSJJAG00000023235
Lesser Egyptian jerboa	MODERN SPECIES	192																ENSJJAG00000018035 #22	Tmem47 (ENSJJAG00000017721)	Map7d2 (ENSJJAG00000017202)	Eif1ax (ENSJJAG00000016949)	Rps6ka3 (ENSJJAG00000016899)	ENSJJAG00000011798	ENSJJAG00000016502	ENSJJAG00000016365	ENSJJAG00000016309	ENSJJAG00000011807	Cnksr2 (ENSJJAG00000016115)	Smpx (ENSJJAG00000015249)
Kangaroo rat	MODERN SPECIES	438	Elmod2 (ENSDORG00000026741)	Ucp1 (ENSDORG00000001952)	Tbc1d9 (ENSDORG00000001961)	Rnf150 (ENSDORG00000012239)	Zfp330 (ENSDORG00000010322)	Il15 (ENSDORG00000014153)	Inpp4b (ENSDORG00000014154)	ENSDORG00000023817	Usp38 (ENSDORG00000004940) #7	Gab1 (ENSDORG00000015902) #8	Smarca5 (ENSDORG00000003466) #10	Hhip (ENSDORG00000016419) #17	ENSDORG00000016690 #18	Abce1 (ENSDORG00000016691) #19	Otud4 (ENSDORG00000016692) #20	Smad1 (ENSDORG00000008067) #22	ENSDORG00000008070 #23	Zfp827 (ENSDORG00000008073) #26	Lsm6 (ENSDORG00000000933) #27	Slc10a7 (ENSDORG00000001306) #29	Pou4f2 (ENSDORG00000004448) #30	Ttc29 (ENSDORG00000001176) #31	Ednra (ENSDORG00000014305) #32	ENSDORG00000028284 #33	Prmt9 (ENSDORG00000010111) #34	Arhgap10 (ENSDORG00000016700) #36	Nr3c2 (ENSDORG00000016701) #37
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000168784 #35	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000168784 #35	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00910000148499	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877	ENSGT00390000010038
Suina	ANCESTRAL SPECIES	22	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Pig	MODERN SPECIES	16	MGAT4D (ENSSSCG00000038236)	ELMOD2 (ENSSSCG00000009055)	TBC1D9 (ENSSSCG00000032741)	RNF150 (ENSSSCG00000009053)	ZNF330 (ENSSSCG00000009052)	IL15 (ENSSSCG00000009051)	INPP4B (ENSSSCG00000009050)	USP38 (ENSSSCG00000009049) #7	GAB1 (ENSSSCG00000009048) #8	SMARCA5 (ENSSSCG00000009047) #10	ENSSSCG00000009046 #16	HHIP (ENSSSCG00000009045) #17	ANAPC10 (ENSSSCG00000033871) #18	ABCE1 (ENSSSCG00000009043) #19	OTUD4 (ENSSSCG00000009042) #20	SMAD1 (ENSSSCG00000009040) #22	MMAA (ENSSSCG00000009039) #23	C4orf51 (ENSSSCG00000042317) #25	ZNF827 (ENSSSCG00000009037) #26	LSM6 (ENSSSCG00000035973) #27	REELD1 (ENSSSCG00000041625) #28	ENSSSCG00000048545	SLC10A7 (ENSSSCG00000009035) #29	POU4F2 (ENSSSCG00000026015) #30	ENSSSCG00000062405	TTC29 (ENSSSCG00000040272) #31	EDNRA (ENSSSCG00000009031) #32	TMEM184C (ENSSSCG00000030044) #33	PRMT9 (ENSSSCG00000009030) #34	ARHGAP10 (ENSSSCG00000009029) #36	ENSSSCG00000043522
Chacoan peccary	MODERN SPECIES	120	MGAT4D (ENSCWAG00000007811)	ELMOD2 (ENSCWAG00000008046)	TBC1D9 (ENSCWAG00000008142)	RNF150 (ENSCWAG00000008342)	ZNF330 (ENSCWAG00000008534)	IL15 (ENSCWAG00000008557)	INPP4B (ENSCWAG00000008695)	USP38 (ENSCWAG00000009147) #7	GAB1 (ENSCWAG00000009243) #8	SMARCA5 (ENSCWAG00000009513) #10	ENSCWAG00000009655	HHIP (ENSCWAG00000009710) #17	ANAPC10 (ENSCWAG00000009870) #18	ABCE1 (ENSCWAG00000009941) #19	OTUD4 (ENSCWAG00000010007) #20	SMAD1 (ENSCWAG00000010148) #22	MMAA (ENSCWAG00000010198) #23	C4orf51 (ENSCWAG00000010248) #25	ZNF827 (ENSCWAG00000010322) #26	LSM6 (ENSCWAG00000010564) #27	REELD1 (ENSCWAG00000010608) #28	SLC10A7 (ENSCWAG00000010694) #29	POU4F2 (ENSCWAG00000011402) #30	TTC29 (ENSCWAG00000011446) #31	EDNRA (ENSCWAG00000011919) #32	TMEM184C (ENSCWAG00000012073) #33	PRMT9 (ENSCWAG00000012146) #34	ARHGAP10 (ENSCWAG00000012206) #36	NR3C2 (ENSCWAG00000012270) #37	DCLK2 (ENSCWAG00000012779)	LRBA (ENSCWAG00000013328)
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00910000148499	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877	ENSGT00390000010038
Camelidae	ANCESTRAL SPECIES	20	ENSGT00910000148499	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00950000185087	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000154895.a.a	ENSGT01050000244827.C.c.a.a
Arabian camel	MODERN SPECIES	11	TBC1D9 (ENSCDRG00005000929)	RNF150 (ENSCDRG00005000887)	ZNF330 (ENSCDRG00005000859)	IL15 (ENSCDRG00005000841)	INPP4B (ENSCDRG00005000441)	ENSCDRG00005000327	USP38 (ENSCDRG00005000298) #7	GAB1 (ENSCDRG00005000265) #8	ENSCDRG00005000246	SMARCA5 (ENSCDRG00005000105) #10	FREM3 (ENSCDRG00005000076) #11	HHIP (ENSCDRG00005000052) #17	ANAPC10 (ENSCDRG00005000035) #18	ABCE1 (ENSCDRG00005000029) #19	OTUD4 (ENSCDRG00005000022) #20	SMAD1 (ENSCDRG00005000018) #22	MMAA (ENSCDRG00005020233) #23	C4orf51 (ENSCDRG00005020225) #25	ZNF827 (ENSCDRG00005020126) #26	LSM6 (ENSCDRG00005020097) #27	REELD1 (ENSCDRG00005020091) #28	SLC10A7 (ENSCDRG00005020015) #29	POU4F2 (ENSCDRG00005019973) #30	TTC29 (ENSCDRG00005019850) #31	EDNRA (ENSCDRG00005019808) #32	TMEM184C (ENSCDRG00005019797) #33	PRMT9 (ENSCDRG00005019766) #34	ARHGAP10 (ENSCDRG00005019732) #36	NR3C2 (ENSCDRG00005019699) #37	DCLK2 (ENSCDRG00005019609)	MAB21L2 (ENSCDRG00005019587)
Alpaca	MODERN SPECIES	1894											ENSVPAG00000003332	HHIP (ENSVPAG00000003333) #17	ANAPC10 (ENSVPAG00000003335) #18	ABCE1 (ENSVPAG00000003336) #19	OTUD4 (ENSVPAG00000003339) #20	SMAD1 (ENSVPAG00000003340) #22	MMAA (ENSVPAG00000003342) #23
Artiodactyla_b	ANCESTRAL SPECIES	16	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877	ENSGT00390000010038
Pecora	ANCESTRAL SPECIES	14	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877	ENSGT00390000010038
Yarkand deer	MODERN SPECIES	28	RNF150 (ENSCHYG00000000469)	ZNF330 (ENSCHYG00000000564)	IL15 (ENSCHYG00000000606)	ENSCHYG00000000643	INPP4B (ENSCHYG00000000675)	ENSCHYG00000000800	USP38 (ENSCHYG00000000822) #7	ENSCHYG00000000861	GAB1 (ENSCHYG00000000879) #8	SMARCA5 (ENSCHYG00000000935) #10	FREM3 (ENSCHYG00000001026) #11	HHIP (ENSCHYG00000001103) #17	ANAPC10 (ENSCHYG00000001160) #18	ABCE1 (ENSCHYG00000001201) #19	OTUD4 (ENSCHYG00000001224) #20	SMAD1 (ENSCHYG00000001287) #22	MMAA (ENSCHYG00000001302) #23	C4orf51 (ENSCHYG00000001340) #25	ZNF827 (ENSCHYG00000001410) #26	ENSCHYG00000001720 #27	REELD1 (ENSCHYG00000001740) #28	SLC10A7 (ENSCHYG00000001854) #29	POU4F2 (ENSCHYG00000002171) #30	TTC29 (ENSCHYG00000002186) #31	EDNRA (ENSCHYG00000002219) #32	ENSCHYG00000002240	ENSCHYG00000002250	TMEM184C (ENSCHYG00000002271) #33	PRMT9 (ENSCHYG00000002291) #34	ARHGAP10 (ENSCHYG00000002323) #36	NR3C2 (ENSCHYG00000002397) #37
Percora_a	ANCESTRAL SPECIES	17	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00950000186340	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877	ENSGT00390000010038
Bovidae	ANCESTRAL SPECIES	17	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00950000186340	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877	ENSGT00390000010038
Caprinae	ANCESTRAL SPECIES	17	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00950000186340	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722.bb.a #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.y.b #27	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877	ENSGT00390000010038	ENSGT00940000154895.a.a
Rambouillet Sheep	MODERN SPECIES	8	RNF150 (ENSOARG00020012195)	ZNF330 (ENSOARG00020012126)	ENSOARG00020012074	IL15 (ENSOARG00020011892)	INPP4B (ENSOARG00020011132)	ENSOARG00020011060	USP38 (ENSOARG00020010864) #7	ENSOARG00020010806	GAB1 (ENSOARG00020010619) #8	SMARCA5 (ENSOARG00020010256) #10	FREM3 (ENSOARG00020010076) #11	HHIP (ENSOARG00020025042) #17	ANAPC10 (ENSOARG00020025021) #18	ABCE1 (ENSOARG00020024985) #19	OTUD4 (ENSOARG00020024925) #20	SMAD1 (ENSOARG00020024894) #22	MMAA (ENSOARG00020024857) #23	C4orf51 (ENSOARG00020024840) #25	ZNF827 (ENSOARG00020024616) #26	POU4F2 (ENSOARG00020024207) #30	TTC29 (ENSOARG00020024092) #31	EDNRA (ENSOARG00020024024) #32	TMEM184C (ENSOARG00020023997) #33	PRMT9 (ENSOARG00020023961) #34	ARHGAP10 (ENSOARG00020023485) #36	NR3C2 (ENSOARG00020023338) #37	ENSOARG00020023315	IQCM (ENSOARG00020023274)	DCLK2 (ENSOARG00020022528)	MAB21L2 (ENSOARG00020022453)	LRBA (ENSOARG00020021581)
Goat	MODERN SPECIES	8	TBC1D9 (ENSCHIG00000012014)	RNF150 (ENSCHIG00000025485)	ZNF330 (ENSCHIG00000009128)	ENSCHIG00000017067	IL15 (ENSCHIG00000024482)	INPP4B (ENSCHIG00000019789)	USP38 (ENSCHIG00000023190) #7	GAB1 (ENSCHIG00000024669) #8	ENSCHIG00000013730 #10	FREM3 (ENSCHIG00000016285) #11	ENSCHIG00000021322	HHIP (ENSCHIG00000005365) #17	ENSCHIG00000023676 #18	ABCE1 (ENSCHIG00000019274) #19	OTUD4 (ENSCHIG00000016816) #20	SMAD1 (ENSCHIG00000011281) #22	ENSCHIG00000012417	ENSCHIG00000016648	MMAA (ENSCHIG00000022132) #23	C4orf51 (ENSCHIG00000010712) #25	ZNF827 (ENSCHIG00000023405) #26	ENSCHIG00000010334 #27	SLC10A7 (ENSCHIG00000008543) #29	POU4F2 (ENSCHIG00000012332) #30	TTC29 (ENSCHIG00000025715) #31	EDNRA (ENSCHIG00000019737) #32	ENSCHIG00000008113 #33	PRMT9 (ENSCHIG00000011275) #34	ARHGAP10 (ENSCHIG00000002829) #36	ENSCHIG00000021047 #37	ENSCHIG00000024151
Bovinae	ANCESTRAL SPECIES	13	ENSGT00940000156171	ENSGT00390000017043.k	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403 #7	ENSGT00950000186340	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00970000194377.a	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.w.a #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Bos	ANCESTRAL SPECIES	14	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043.k	ENSGT00390000016264	ENSGT00940000157587.e	ENSGT00940000158403 #7	ENSGT00950000186340	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00970000194377.a	ENSGT00970000194377.b	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908.a #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.w.a #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Bos_b	ANCESTRAL SPECIES	13	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043.k	ENSGT00390000016264	ENSGT00940000157587.e	ENSGT00940000158403 #7	ENSGT00950000186340	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00970000194377.a	ENSGT00970000194377.b	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908.a #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.w.a #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Hybrid Bos Indicus	MODERN SPECIES	8	INPP4B (ENSBIXG00005006091)	ENSBIXG00005009069	ENSBIXG00005009053	USP38 (ENSBIXG00005000366) #7	ENSBIXG00005009006	ENSBIXG00005009003	GAB1 (ENSBIXG00005006767) #8	SMARCA5 (ENSBIXG00005008943) #10	ENSBIXG00005008884	ENSBIXG00005006405	ENSBIXG00005008836	HHIP (ENSBIXG00005008793) #17	ANAPC10 (ENSBIXG00005008731) #18	ABCE1 (ENSBIXG00005008701) #19	OTUD4 (ENSBIXG00005008682) #20	SMAD1 (ENSBIXG00005008639) #22	MMAA (ENSBIXG00005008618) #23	C4orf51 (ENSBIXG00005006083) #25	ZNF827 (ENSBIXG00005008564) #26	ENSBIXG00005008497 #27	REELD1 (ENSBIXG00005008481) #28	SLC10A7 (ENSBIXG00005008458) #29	ENSBIXG00005008414	POU4F2 (ENSBIXG00005008406) #30	TTC29 (ENSBIXG00005008379) #31	EDNRA (ENSBIXG00005008325) #32	TMEM184C (ENSBIXG00005008291) #33	PRMT9 (ENSBIXG00005008281) #34	ARHGAP10 (ENSBIXG00005008218) #36	ENSBIXG00005008146	NR3C2 (ENSBIXG00005008106) #37
Cow	MODERN SPECIES	8	TBC1D9 (ENSBTAG00000018951)	RNF150 (ENSBTAG00000049010)	ZNF330 (ENSBTAG00000000297)	IL15 (ENSBTAG00000018200)	INPP4B (ENSBTAG00000014111)	USP38 (ENSBTAG00000001356) #7	ENSBTAG00000052695	GAB1 (ENSBTAG00000002813) #8	SMARCA5 (ENSBTAG00000003399) #10	GYPB (ENSBTAG00000047331)	GYPA (ENSBTAG00000039325) #16	HHIP (ENSBTAG00000016071) #17	ANAPC10 (ENSBTAG00000013326) #18	ABCE1 (ENSBTAG00000019854) #19	OTUD4 (ENSBTAG00000019857) #20	SMAD1 (ENSBTAG00000002835) #22	MMAA (ENSBTAG00000012800) #23	ENSBTAG00000049365 #25	ZNF827 (ENSBTAG00000012738) #26	LSM6 (ENSBTAG00000014060) #27	REELD1 (ENSBTAG00000054105) #28	SLC10A7 (ENSBTAG00000034522) #29	POU4F2 (ENSBTAG00000005648) #30	TTC29 (ENSBTAG00000004167) #31	ENSBTAG00000049121	EDNRA (ENSBTAG00000013674) #32	TMEM184C (ENSBTAG00000010376) #33	PRMT9 (ENSBTAG00000010381) #34	ARHGAP10 (ENSBTAG00000002531) #36	NR3C2 (ENSBTAG00000027182) #37	DCLK2 (ENSBTAG00000008098)
Bos_a	ANCESTRAL SPECIES	68											ENSGT00970000194377.a	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908.a #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978.x #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Wild yak	MODERN SPECIES	1937																SMAD1 (ENSBMUG00000006411) #22	ENSBMUG00000006391 #23	C4orf51 (ENSBMUG00000006373) #25	ENSBMUG00000006363 #26
Domestic yak	MODERN SPECIES	7										ENSBGRG00000006829	HHIP (ENSBGRG00000006858) #17	ENSBGRG00000006929	ENSBGRG00000006958 #18	ABCE1 (ENSBGRG00000007084) #19	OTUD4 (ENSBGRG00000007202) #20	SMAD1 (ENSBGRG00000007622) #22	MMAA (ENSBGRG00000007781) #23	C4orf51 (ENSBGRG00000007910) #25	ZNF827 (ENSBGRG00000008031) #26	ENSBGRG00000008347	ENSBGRG00000008375 #27	REELD1 (ENSBGRG00000008428) #28	SLC10A7 (ENSBGRG00000008510) #29	POU4F2 (ENSBGRG00000008809) #30	TTC29 (ENSBGRG00000008877) #31	ENSBGRG00000009257	EDNRA (ENSBGRG00000009303) #32	ENSBGRG00000009466	TMEM184C (ENSBGRG00000010666) #33	PRMT9 (ENSBGRG00000010736) #34	ENSBGRG00000010968
American bison	MODERN SPECIES	3105	RRP7A (ENSBBBG00000021090)	SERHL2 (ENSBBBG00000021075)	NFAM1 (ENSBBBG00000021019)	ENSBBBG00000005645	ENSBBBG00000021001	ENSBBBG00000005638	NDUFA6 (ENSBBBG00000020956)	SMDT1 (ENSBBBG00000005631)	PHETA2 (ENSBBBG00000020942)	NAGA (ENSBBBG00000020936)	WBP2NL (ENSBBBG00000020924)	SEPTIN3 (ENSBBBG00000020899)	SMIM45 (ENSBBBG00000020793)	CENPM (ENSBBBG00000020787)	SREBF2 (ENSBBBG00000005596)	SMAD1 (ENSBBBG00000020659) #22	MMAA (ENSBBBG00000005563) #23	C4orf51 (ENSBBBG00000020596) #25	ZNF827 (ENSBBBG00000020586) #26	ENSBBBG00000000514 #27	REELD1 (ENSBBBG00000000520) #28	SLC10A7 (ENSBBBG00000000540) #29	POU4F2 (ENSBBBG00000000614) #30	TTC29 (ENSBBBG00000000621) #31
Siberian musk deer	MODERN SPECIES	382										ENSMMSG00000011397	ENSMMSG00000011372	HHIP (ENSMMSG00000011270) #17	ANAPC10 (ENSMMSG00000011208) #18	ABCE1 (ENSMMSG00000011150) #19	OTUD4 (ENSMMSG00000010945) #20	SMAD1 (ENSMMSG00000010899) #22	MMAA (ENSMMSG00000010764) #23	C4orf51 (ENSMMSG00000010694) #25	ZNF827 (ENSMMSG00000010438) #26	LSM6 (ENSMMSG00000010372) #27	REELD1 (ENSMMSG00000010327) #28	ENSMMSG00000010303	SLC10A7 (ENSMMSG00000010129) #29
Cetacea	ANCESTRAL SPECIES	12	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00990000212162	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000154895.a.a	ENSGT00940000154778
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00990000212162	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000154895.a.a	ENSGT00940000154778
Odontoceti_a	ANCESTRAL SPECIES	26	ENSGT00950000182915.a.a.b	ENSGT00940000156589	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00990000212162	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000154895.a.a	ENSGT00940000154778
Dolphin	MODERN SPECIES	1820																SMAD1 (ENSTTRG00000008086) #22	MMAA (ENSTTRG00000008092) #23
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00950000182915.a.a.b	ENSGT00940000156589	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00990000212162	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000154895.a.a	ENSGT00940000154778
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00950000182915.a.a.b	ENSGT00940000156589	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00990000212162	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000154895.a.a	ENSGT00940000154778
Beluga whale	MODERN SPECIES	53				ENSDLEG00000007660	ENSDLEG00000007657	ZNF330 (ENSDLEG00000007642)	IL15 (ENSDLEG00000007616)	INPP4B (ENSDLEG00000016217)	USP38 (ENSDLEG00000016185) #7	GAB1 (ENSDLEG00000016168) #8	SMARCA5 (ENSDLEG00000016112) #10	HHIP (ENSDLEG00000016095) #17	ANAPC10 (ENSDLEG00000016085) #18	ABCE1 (ENSDLEG00000016059) #19	OTUD4 (ENSDLEG00000016002) #20	SMAD1 (ENSDLEG00000015975) #22	MMAA (ENSDLEG00000015945) #23	ZNF827 (ENSDLEG00000015910) #26	LSM6 (ENSDLEG00000015899) #27	REELD1 (ENSDLEG00000015878) #28	SLC10A7 (ENSDLEG00000015846) #29	POU4F2 (ENSDLEG00000015837) #30	TTC29 (ENSDLEG00000015814) #31	EDNRA (ENSDLEG00000015808) #32	ENSDLEG00000015796	ENSDLEG00000015792	TMEM184C (ENSDLEG00000015783) #33	PRMT9 (ENSDLEG00000015745) #34	ENSDLEG00000015737	ARHGAP10 (ENSDLEG00000015639) #36	NR3C2 (ENSDLEG00000015618) #37
Narwhal	MODERN SPECIES	307	ELMOD2 (ENSMMNG00015013079)	TBC1D9 (ENSMMNG00015013089)	ENSMMNG00015013116	RNF150 (ENSMMNG00015015631)	ZNF330 (ENSMMNG00015015654)	IL15 (ENSMMNG00015015698)	INPP4B (ENSMMNG00015015936)	USP38 (ENSMMNG00015016230) #7	GAB1 (ENSMMNG00015016325) #8	SMARCA5 (ENSMMNG00015016399) #10	ENSMMNG00015016476	HHIP (ENSMMNG00015016532) #17	ENSMMNG00015016565 #18	ABCE1 (ENSMMNG00015016581) #19	OTUD4 (ENSMMNG00015016633) #20	SMAD1 (ENSMMNG00015016702) #22	MMAA (ENSMMNG00015016739) #23	C4orf51 (ENSMMNG00015016781) #25	ZNF827 (ENSMMNG00015016835) #26	REELD1 (ENSMMNG00015016914) #28	SLC10A7 (ENSMMNG00015016983) #29	POU4F2 (ENSMMNG00015017044) #30	TTC29 (ENSMMNG00015017062) #31	EDNRA (ENSMMNG00015017085) #32	ENSMMNG00015017155	TMEM184C (ENSMMNG00015017180) #33	PRMT9 (ENSMMNG00015017236) #34	ARHGAP10 (ENSMMNG00015017349) #36	NR3C2 (ENSMMNG00015017740) #37	DCLK2 (ENSMMNG00015017930)	LRBA (ENSMMNG00015018026)
Vaquita	MODERN SPECIES	16	CLGN (ENSPSNG00000015754)	ELMOD2 (ENSPSNG00000015677)	TBC1D9 (ENSPSNG00000015613)	RNF150 (ENSPSNG00000015526)	ZNF330 (ENSPSNG00000015475)	IL15 (ENSPSNG00000015292)	INPP4B (ENSPSNG00000015200)	USP38 (ENSPSNG00000015085) #7	GAB1 (ENSPSNG00000014895) #8	SMARCA5 (ENSPSNG00000014782) #10	ENSPSNG00000014681	HHIP (ENSPSNG00000014618) #17	ENSPSNG00000014531 #18	ABCE1 (ENSPSNG00000014453) #19	OTUD4 (ENSPSNG00000014326) #20	SMAD1 (ENSPSNG00000014264) #22	MMAA (ENSPSNG00000014172) #23	ZNF827 (ENSPSNG00000013982) #26	LSM6 (ENSPSNG00000013905) #27	SLC10A7 (ENSPSNG00000013581) #29	POU4F2 (ENSPSNG00000013436) #30	TTC29 (ENSPSNG00000013058) #31	EDNRA (ENSPSNG00000012879) #32	TMEM184C (ENSPSNG00000012807) #33	PRMT9 (ENSPSNG00000012767) #34	ARHGAP10 (ENSPSNG00000012644) #36	NR3C2 (ENSPSNG00000012520) #37	DCLK2 (ENSPSNG00000012086)	MAB21L2 (ENSPSNG00000012010)	LRBA (ENSPSNG00000011879)	ENSPSNG00000011823
Sperm whale	MODERN SPECIES	18	ELMOD2 (ENSPCTG00005001098)	ENSPCTG00005001118	TBC1D9 (ENSPCTG00005001153)	RNF150 (ENSPCTG00005001237)	ZNF330 (ENSPCTG00005001281)	IL15 (ENSPCTG00005001318)	INPP4B (ENSPCTG00005001389)	USP38 (ENSPCTG00005001450) #7	GAB1 (ENSPCTG00005001490) #8	SMARCA5 (ENSPCTG00005001535) #10	ENSPCTG00005001593	HHIP (ENSPCTG00005001627) #17	ANAPC10 (ENSPCTG00005001660) #18	ABCE1 (ENSPCTG00005001679) #19	OTUD4 (ENSPCTG00005001708) #20	SMAD1 (ENSPCTG00005001735) #22	MMAA (ENSPCTG00005001755) #23	ZNF827 (ENSPCTG00005001804) #26	LSM6 (ENSPCTG00005001901) #27	SLC10A7 (ENSPCTG00005001951) #29	POU4F2 (ENSPCTG00005002032) #30	TTC29 (ENSPCTG00005002054) #31	ENSPCTG00005002142	EDNRA (ENSPCTG00005002154) #32	TMEM184C (ENSPCTG00005002203) #33	PRMT9 (ENSPCTG00005002225) #34	ARHGAP10 (ENSPCTG00005002260) #36	NR3C2 (ENSPCTG00005002287) #37	ENSPCTG00005002306	DCLK2 (ENSPCTG00005002361)	LRBA (ENSPCTG00005002441)
Blue whale	MODERN SPECIES	16	TBC1D9 (ENSBMSG00010002068)	RNF150 (ENSBMSG00010002115)	ZNF330 (ENSBMSG00010002166)	ENSBMSG00010002175	IL15 (ENSBMSG00010002198)	INPP4B (ENSBMSG00010002249)	ENSBMSG00010002305	USP38 (ENSBMSG00010002350) #7	GAB1 (ENSBMSG00010002430) #8	SMARCA5 (ENSBMSG00010002485) #10	ENSBMSG00010002557	HHIP (ENSBMSG00010002579) #17	ENSBMSG00010002597 #18	ABCE1 (ENSBMSG00010002608) #19	OTUD4 (ENSBMSG00010002625) #20	SMAD1 (ENSBMSG00010002652) #22	MMAA (ENSBMSG00010002665) #23	C4orf51 (ENSBMSG00010002687) #25	ZNF827 (ENSBMSG00010002746) #26	LSM6 (ENSBMSG00010003073) #27	REELD1 (ENSBMSG00010003085) #28	SLC10A7 (ENSBMSG00010003119) #29	POU4F2 (ENSBMSG00010003153) #30	TTC29 (ENSBMSG00010003177) #31	EDNRA (ENSBMSG00010003277) #32	TMEM184C (ENSBMSG00010003315) #33	PRMT9 (ENSBMSG00010003326) #34	ARHGAP10 (ENSBMSG00010003339) #36	NR3C2 (ENSBMSG00010000098) #37	DCLK2 (ENSBMSG00010000211)	LRBA (ENSBMSG00010000269)
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000168784 #35	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Carnivora	ANCESTRAL SPECIES	5	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000168784 #35	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Caniformia	ANCESTRAL SPECIES	7	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000168784 #35	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038
Canidae	ANCESTRAL SPECIES	60											ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000168784 #35	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a	ENSGT01050000244827.C.c.a.a
Canis_lupus	ANCESTRAL SPECIES	16	ENSGT00940000156566	ENSGT00940000158637	ENSGT01020000230401.b.a	ENSGT00390000007685	ENSGT00390000000987	ENSGT00940000158078	ENSGT00940000160733	ENSGT00940000154917	ENSGT00940000156733 #10	ENSGT00940000167707.a.a	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00940000156063 #26	ENSGT01090000260040.a.a.b.dc.b	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000168784 #35	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00950000182869.e.b.b.o.b
Dog	MODERN SPECIES	6	NT5DC3 (ENSCAFG00845010184)	ENSCAFG00845010352	HSP90B1 (ENSCAFG00845010421)	UQCC6 (ENSCAFG00845010622)	TDG (ENSCAFG00845010683)	GLT8D2 (ENSCAFG00845010772)	HCFC2 (ENSCAFG00845010878)	NFYB (ENSCAFG00845011102)	SMARCA5 (ENSCAFG00845011175) #10	ENSCAFG00845011402	GYPA (ENSCAFG00845011416) #16	HHIP (ENSCAFG00845011571) #17	ANAPC10 (ENSCAFG00845011688) #18	ABCE1 (ENSCAFG00845011788) #19	OTUD4 (ENSCAFG00845011956) #20	SMAD1 (ENSCAFG00845012104) #22	MMAA (ENSCAFG00845012165) #23	ZNF827 (ENSCAFG00845012357) #26	ENSCAFG00845012641	ENSCAFG00845012694 #27	SLC10A7 (ENSCAFG00845012862) #29	POU4F2 (ENSCAFG00845013080) #30	TTC29 (ENSCAFG00845013144) #31	EDNRA (ENSCAFG00845013340) #32	TMEM184C (ENSCAFG00845013383) #33	PRMT9 (ENSCAFG00845013422) #34	ARHGAP10 (ENSCAFG00845013505) #36	NR3C2 (ENSCAFG00845013694) #37	IQCM (ENSCAFG00845013775)	ENSCAFG00845013810	DCLK2 (ENSCAFG00845013901)
Dingo	MODERN SPECIES	277	STAB2 (ENSCAFG00020024644)	NT5DC3 (ENSCAFG00020024802)	HSP90B1 (ENSCAFG00020024947)	UQCC6 (ENSCAFG00020025608)	GLT8D2 (ENSCAFG00020025612)	ENSCAFG00020025617	HCFC2 (ENSCAFG00020025622)	NFYB (ENSCAFG00020025633)	SMARCA5 (ENSCAFG00020025641) #10	ENSCAFG00020025654	ENSCAFG00020025656 #16	HHIP (ENSCAFG00020025660) #17	ANAPC10 (ENSCAFG00020025663) #18	ABCE1 (ENSCAFG00020025667) #19	OTUD4 (ENSCAFG00020025778) #20	SMAD1 (ENSCAFG00020025819) #22	MMAA (ENSCAFG00020025827) #23	ZNF827 (ENSCAFG00020025846) #26	ENSCAFG00020025899	LSM6 (ENSCAFG00020025902) #27	SLC10A7 (ENSCAFG00020025908) #29	POU4F2 (ENSCAFG00020025916) #30	TTC29 (ENSCAFG00020025920) #31	EDNRA (ENSCAFG00020025935) #32	TMEM184C (ENSCAFG00020025936) #33	PRMT9 (ENSCAFG00020025939) #34	ENSCAFG00020025962 #35	ARHGAP10 (ENSCAFG00020025975) #36	NR3C2 (ENSCAFG00020025992) #37	ENSCAFG00020026009	DCLK2 (ENSCAFG00020026012)
Red fox	MODERN SPECIES	147											ENSVVUG00000009111 #16	HHIP (ENSVVUG00000009129) #17	ANAPC10 (ENSVVUG00000009139) #18	ABCE1 (ENSVVUG00000009151) #19	OTUD4 (ENSVVUG00000009162) #20	SMAD1 (ENSVVUG00000009203) #22	MMAA (ENSVVUG00000009211) #23	ZNF827 (ENSVVUG00000009224) #26	LSM6 (ENSVVUG00000009254) #27	ENSVVUG00000009257	ENSVVUG00000009268 #29	SLC10A7 (ENSVVUG00000009276) #29	POU4F2 (ENSVVUG00000009285) #30	TTC29 (ENSVVUG00000009315) #31	EDNRA (ENSVVUG00000009363) #32	TMEM184C (ENSVVUG00000009374) #33	PRMT9 (ENSVVUG00000009381) #34	ARHGAP10 (ENSVVUG00000009406) #36	NR3C2 (ENSVVUG00000009451) #37	MOXD1 (ENSVVUG00000009655)	STX7 (ENSVVUG00000009669)
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000154895.a.a	ENSGT00940000154778
Mustelinae	ANCESTRAL SPECIES	82	ENSGT01030000234597.a.b.a	ENSGT00390000000378.d.b.db.b	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.q.b	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00960000188301	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
American mink	MODERN SPECIES	197		ENSNVIG00000007896	ADRA1A (ENSNVIG00000007921)	DPYSL2 (ENSNVIG00000007952)	PNMA2 (ENSNVIG00000008000)	ENSNVIG00000008003	UBP38 (ENSNVIG00000008015) #7	GAB1 (ENSNVIG00000008071) #8	SMARCA5 (ENSNVIG00000008216) #10	FREM3 (ENSNVIG00000008272) #11	ENSNVIG00000008308	HHIP (ENSNVIG00000008323) #17	D6RA92 (ENSNVIG00000008368) #18	ABCE1 (ENSNVIG00000008435) #19	OTUD4 (ENSNVIG00000008469) #20	SMAD1 (ENSNVIG00000008529) #22	MMAA (ENSNVIG00000008585) #23	C4orf51 (ENSNVIG00000008623) #25	ZNF827 (ENSNVIG00000008646) #26	ENSNVIG00000008816 #27	REELD1 (ENSNVIG00000008846) #28	NTCP7 (ENSNVIG00000008869) #29	POU4F2 (ENSNVIG00000008980) #30
Ferret	MODERN SPECIES	224										FREM3 (ENSMPUG00000006612) #11	ENSMPUG00000006616	HHIP (ENSMPUG00000006621) #17	ANAPC10 (ENSMPUG00000006631) #18	ABCE1 (ENSMPUG00000006640) #19	OTUD4 (ENSMPUG00000006784) #20	SMAD1 (ENSMPUG00000006867) #22	ENSMPUG00000006872	MMAA (ENSMPUG00000006877) #23	C4orf51 (ENSMPUG00000006910) #25	ZNF827 (ENSMPUG00000006921) #26	LSM6 (ENSMPUG00000006936) #27	ENSMPUG00000006949 #28	SLC10A7 (ENSMPUG00000006955) #29	POU4F2 (ENSMPUG00000006963) #30	TTC29 (ENSMPUG00000006968) #31	ENSMPUG00000006979	EDNRA (ENSMPUG00000006985) #32	TMEM184C (ENSMPUG00000006995) #33	PRMT9 (ENSMPUG00000007003) #34	ARHGAP10 (ENSMPUG00000007012) #36	NR3C2 (ENSMPUG00000007025) #37
Ursidae	ANCESTRAL SPECIES	17	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559.y.b #36	ENSGT00940000159333 #37	ENSGT00940000154895.a.a	ENSGT01050000244827.C.c.a.a
Ursus	ANCESTRAL SPECIES	68	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559.y.b #36	ENSGT00940000159333 #37	ENSGT00940000154895.a.a	ENSGT00940000154778	ENSGT01050000244827.C.c.a.a	ENSGT00390000018433.s.b
Polar bear	MODERN SPECIES	122	TBC1D9 (ENSUMAG00000015143)	RNF150 (ENSUMAG00000015188)	ZNF330 (ENSUMAG00000015225)	IL15 (ENSUMAG00000015241)	INPP4B (ENSUMAG00000015269)	ENSUMAG00000015290 #7	ENSUMAG00000015293 #7	GAB1 (ENSUMAG00000015305) #8	SMARCA5 (ENSUMAG00000015324) #10	FREM3 (ENSUMAG00000015339) #11	ENSUMAG00000015349 #16	HHIP (ENSUMAG00000015358) #17	ANAPC10 (ENSUMAG00000015370) #18	ABCE1 (ENSUMAG00000015377) #19	OTUD4 (ENSUMAG00000015403) #20	SMAD1 (ENSUMAG00000015575) #22	MMAA (ENSUMAG00000015592) #23	ZNF827 (ENSUMAG00000015618) #26	LSM6 (ENSUMAG00000015727) #27	REELD1 (ENSUMAG00000015729) #28	SLC10A7 (ENSUMAG00000015740) #29	TTC29 (ENSUMAG00000015756) #31	EDNRA (ENSUMAG00000015775) #32	TMEM184C (ENSUMAG00000015782) #33	PRMT9 (ENSUMAG00000015791) #34	ARHGAP10 (ENSUMAG00000015810) #36	NR3C2 (ENSUMAG00000015845) #37	DCLK2 (ENSUMAG00000015931)	LRBA (ENSUMAG00000015985)	MAB21L2 (ENSUMAG00000016054)	RPS3A (ENSUMAG00000016064)
American black bear	MODERN SPECIES	5690																ENSUAMG00000000744 #22
Giant Panda	MODERN SPECIES	15	TBC1D9 (ENSAMEG00000002883)	RNF150 (ENSAMEG00000002953)	ZNF330 (ENSAMEG00000002960)	IL15 (ENSAMEG00000008060)	INPP4B (ENSAMEG00000008050)	USP38 (ENSAMEG00000009698) #7	GAB1 (ENSAMEG00000009676) #8	SMARCA5 (ENSAMEG00000009585) #10	FREM3 (ENSAMEG00000016565) #11	ENSAMEG00000024386	HHIP (ENSAMEG00000016574) #17	ANAPC10 (ENSAMEG00000016589) #18	ABCE1 (ENSAMEG00000016596) #19	OTUD4 (ENSAMEG00000016621) #20	ENSAMEG00000019876	SMAD1 (ENSAMEG00000016645) #22	MMAA (ENSAMEG00000016655) #23	C4orf51 (ENSAMEG00000024155) #25	ZNF827 (ENSAMEG00000016667) #26	LSM6 (ENSAMEG00000016671) #27	REELD1 (ENSAMEG00000028424) #28	SLC10A7 (ENSAMEG00000016674) #29	POU4F2 (ENSAMEG00000016679) #30	TTC29 (ENSAMEG00000016681) #31	EDNRA (ENSAMEG00000002011) #32	TMEM184C (ENSAMEG00000002013) #33	PRMT9 (ENSAMEG00000002035) #34	ARHGAP10 (ENSAMEG00000002057) #36	NR3C2 (ENSAMEG00000002068) #37	DCLK2 (ENSAMEG00000009231)	MAB21L2 (ENSAMEG00000030266)
Felidae	ANCESTRAL SPECIES	4	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00960000188301	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Panthera	ANCESTRAL SPECIES	5	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00960000188301	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00960000188301	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
lion	MODERN SPECIES	4	UCP1 (ENSPLOG00000013796)	TBC1D9 (ENSPLOG00000013580)	RNF150 (ENSPLOG00000013378)	ZNF330 (ENSPLOG00000013327)	IL15 (ENSPLOG00000013278)	INPP4B (ENSPLOG00000013206)	USP38 (ENSPLOG00000013115) #7	GAB1 (ENSPLOG00000012927) #8	SMARCA5 (ENSPLOG00000012828) #10	FREM3 (ENSPLOG00000012733) #11	ENSPLOG00000012702	HHIP (ENSPLOG00000012505) #17	ANAPC10 (ENSPLOG00000012426) #18	ABCE1 (ENSPLOG00000012370) #19	OTUD4 (ENSPLOG00000012289) #20	SMAD1 (ENSPLOG00000012243) #22	MMAA (ENSPLOG00000012175) #23	C4orf51 (ENSPLOG00000012109) #25	ZNF827 (ENSPLOG00000011513) #26	LSM6 (ENSPLOG00000011387) #27	REELD1 (ENSPLOG00000011324) #28	SLC10A7 (ENSPLOG00000011188) #29	POU4F2 (ENSPLOG00000011107) #30	TTC29 (ENSPLOG00000010821) #31	EDNRA (ENSPLOG00000010653) #32	TMEM184C (ENSPLOG00000010571) #33	PRMT9 (ENSPLOG00000010474) #34	ARHGAP10 (ENSPLOG00000010380) #36	NR3C2 (ENSPLOG00000010318) #37	IQCM (ENSPLOG00000010221)	DCLK2 (ENSPLOG00000009806)
leopard	MODERN SPECIES	3	TBC1D9 (ENSPPRG00000022937)	RNF150 (ENSPPRG00000023447)	ZNF330 (ENSPPRG00000015737)	IL15 (ENSPPRG00000012086)	INPP4B (ENSPPRG00000009054)	USP38 (ENSPPRG00000006892) #7	GAB1 (ENSPPRG00000005605) #8	SMARCA5 (ENSPPRG00000004925) #10	FREM3 (ENSPPRG00000002995) #11	ENSPPRG00000017780	ENSPPRG00000002255	HHIP (ENSPPRG00000001593) #17	ANAPC10 (ENSPPRG00000000631) #18	ABCE1 (ENSPPRG00000022963) #19	OTUD4 (ENSPPRG00000023451) #20	SMAD1 (ENSPPRG00000024576) #22	MMAA (ENSPPRG00000018308) #23	C4orf51 (ENSPPRG00000014494) #25	ZNF827 (ENSPPRG00000013768) #26	LSM6 (ENSPPRG00000012806) #27	REELD1 (ENSPPRG00000012290) #28	SLC10A7 (ENSPPRG00000011455) #29	POU4F2 (ENSPPRG00000008969) #30	TTC29 (ENSPPRG00000008835) #31	ENSPPRG00000007562	EDNRA (ENSPPRG00000007364) #32	TMEM184C (ENSPPRG00000005584) #33	PRMT9 (ENSPPRG00000004425) #34	ENSPPRG00000004026 #36
Tiger	MODERN SPECIES	367	TBC1D9 (ENSPTIG00000005564)	RNF150 (ENSPTIG00000005145)	ZNF330 (ENSPTIG00000004314)	IL15 (ENSPTIG00000001825)	INPP4B (ENSPTIG00000000345)	USP38 (ENSPTIG00000021206) #7	GAB1 (ENSPTIG00000021050) #8	SMARCA5 (ENSPTIG00000020959) #10	FREM3 (ENSPTIG00000020850) #11	ENSPTIG00000020826	HHIP (ENSPTIG00000020696) #17	ENSPTIG00000020677 #18	ENSPTIG00000020565 #18	ABCE1 (ENSPTIG00000020422) #19	OTUD4 (ENSPTIG00000020267) #20	SMAD1 (ENSPTIG00000020242) #22	MMAA (ENSPTIG00000020116) #23	C4orf51 (ENSPTIG00000019914) #25	ZNF827 (ENSPTIG00000019818) #26	LSM6 (ENSPTIG00000019769) #27	REELD1 (ENSPTIG00000019736) #28	SLC10A7 (ENSPTIG00000018877) #29	POU4F2 (ENSPTIG00000018653) #30	TTC29 (ENSPTIG00000018581) #31	EDNRA (ENSPTIG00000018281) #32	TMEM184C (ENSPTIG00000018237) #33	PRMT9 (ENSPTIG00000018085) #34	ENSPTIG00000017981	ENSPTIG00000017899	ARHGAP10 (ENSPTIG00000017843) #36	NR3C2 (ENSPTIG00000017479) #37
Cat	MODERN SPECIES	235	RNF150 (ENSFCAG00000033343)	ZNF330 (ENSFCAG00000025166)	IL15 (ENSFCAG00000030158)	INPP4B (ENSFCAG00000026268)	ENSFCAG00000049302	USP38 (ENSFCAG00000024468) #7	GAB1 (ENSFCAG00000027102) #8	SMARCA5 (ENSFCAG00000004544) #10	FREM3 (ENSFCAG00000022741) #11	ENSFCAG00000048627	ENSFCAG00000041204	HHIP (ENSFCAG00000018108) #17	ANAPC10 (ENSFCAG00000030108) #18	ABCE1 (ENSFCAG00000030441) #19	OTUD4 (ENSFCAG00000022224) #20	SMAD1 (ENSFCAG00000004136) #22	MMAA (ENSFCAG00000030592) #23	C4orf51 (ENSFCAG00000045664) #25	ZNF827 (ENSFCAG00000004139) #26	LSM6 (ENSFCAG00000003047) #27	REELD1 (ENSFCAG00000046759) #28	ENSFCAG00000028577	SLC10A7 (ENSFCAG00000003048) #29	POU4F2 (ENSFCAG00000003049) #30	TTC29 (ENSFCAG00000012370) #31	EDNRA (ENSFCAG00000045372) #32	TMEM184C (ENSFCAG00000015410) #33	PRMT9 (ENSFCAG00000008695) #34	ARHGAP10 (ENSFCAG00000001820) #36	NR3C2 (ENSFCAG00000027453) #37	IQCM (ENSFCAG00000022342)
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Equus	ANCESTRAL SPECIES	24	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00550000075214 #16	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000170855	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Donkey	MODERN SPECIES	22	TBC1D9 (ENSEASG00005007836)	RNF150 (ENSEASG00005007830)	ZNF330 (ENSEASG00005007822)	IL15 (ENSEASG00005036963)	ENSEASG00005007814	INPP4B (ENSEASG00005007803)	USP38 (ENSEASG00005005319) #7	GAB1 (ENSEASG00005005314) #8	SMARCA5 (ENSEASG00005001866) #10	ENSEASG00005027902 #16	HHIP (ENSEASG00005001609) #17	ANAPC10 (ENSEASG00005036814) #18	ABCE1 (ENSEASG00005001594) #19	OTUD4 (ENSEASG00005001588) #20	ENSEASG00005001582	SMAD1 (ENSEASG00005001575) #22	MMAA (ENSEASG00005001563) #23	C4orf51 (ENSEASG00005027855) #25	ZNF827 (ENSEASG00005001543) #26	LSM6 (ENSEASG00005001533) #27	REELD1 (ENSEASG00005001529) #28	SLC10A7 (ENSEASG00005001510) #29	POU4F2 (ENSEASG00005001506) #30	TTC29 (ENSEASG00005001491) #31	EDNRA (ENSEASG00005001483) #32	TMEM184C (ENSEASG00005001471) #33	PRMT9 (ENSEASG00005001405) #34	ARHGAP10 (ENSEASG00005001168) #36	NR3C2 (ENSEASG00005000984) #37	IQCM (ENSEASG00005028644)	DCLK2 (ENSEASG00005000953)
Horse	MODERN SPECIES	11	INPP4B (ENSECAG00000010327)	ENSECAG00000054413	USP38 (ENSECAG00000009333) #7	ENSECAG00000059675	GAB1 (ENSECAG00000008570) #8	SMARCA5 (ENSECAG00000002676) #10	FREM3 (ENSECAG00000024518) #11	ENSECAG00000024514 #16	HHIP (ENSECAG00000024485) #17	ENSECAG00000044723	ANAPC10 (ENSECAG00000024416) #18	ABCE1 (ENSECAG00000023648) #19	OTUD4 (ENSECAG00000023403) #20	ENSECAG00000053592	ENSECAG00000050002	SMAD1 (ENSECAG00000022649) #22	MMAA (ENSECAG00000021810) #23	ENSECAG00000058529 #23	C4orf51 (ENSECAG00000034055) #25	ZNF827 (ENSECAG00000021655) #26	REELD1 (ENSECAG00000033467) #28	SLC10A7 (ENSECAG00000026901) #29	POU4F2 (ENSECAG00000020754) #30	TTC29 (ENSECAG00000020287) #31	EDNRA (ENSECAG00000019798) #32	TMEM184C (ENSECAG00000019574) #33	PRMT9 (ENSECAG00000018097) #34	ARHGAP10 (ENSECAG00000016629) #36	NR3C2 (ENSECAG00000016605) #37	IQCM (ENSECAG00000033875)	DCLK2 (ENSECAG00000014313)
Chiroptera	ANCESTRAL SPECIES	36	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a	ENSGT00940000154778
Microchiroptera	ANCESTRAL SPECIES	38	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a	ENSGT00940000154778
Greater horseshoe bat	MODERN SPECIES	9	UCP1 (ENSRFEG00010013035)	TBC1D9 (ENSRFEG00010013080)	RNF150 (ENSRFEG00010013446)	ZNF330 (ENSRFEG00010013528)	IL15 (ENSRFEG00010013629)	INPP4B (ENSRFEG00010013805)	USP38 (ENSRFEG00010013936) #7	ENSRFEG00010014017	GAB1 (ENSRFEG00010014081) #8	SMARCA5 (ENSRFEG00010014236) #10	ENSRFEG00010014311	HHIP (ENSRFEG00010014382) #17	ENSRFEG00010014457 #18	ABCE1 (ENSRFEG00010014545) #19	OTUD4 (ENSRFEG00010014600) #20	SMAD1 (ENSRFEG00010014733) #22	MMAA (ENSRFEG00010014780) #23	C4orf51 (ENSRFEG00010014824) #25	ZNF827 (ENSRFEG00010014952) #26	LSM6 (ENSRFEG00010015332) #27	SLC10A7 (ENSRFEG00010015418) #29	POU4F2 (ENSRFEG00010015642) #30	TTC29 (ENSRFEG00010015692) #31	EDNRA (ENSRFEG00010016295) #32	TMEM184C (ENSRFEG00010016470) #33	PRMT9 (ENSRFEG00010016544) #34	ARHGAP10 (ENSRFEG00010016589) #36	NR3C2 (ENSRFEG00010016644) #37	IQCM (ENSRFEG00010005407)	ENSRFEG00010005448	DCLK2 (ENSRFEG00010005563)
Microbat	MODERN SPECIES	938	TBC1D9 (ENSMLUG00000009598)	ENSMLUG00000029642	RNF150 (ENSMLUG00000009658)	ZNF330 (ENSMLUG00000009684)	IL15 (ENSMLUG00000007618)	ENSMLUG00000017627	ENSMLUG00000027792	USP38 (ENSMLUG00000013423) #7	ENSMLUG00000029899	GAB1 (ENSMLUG00000000457) #8	SMARCA5 (ENSMLUG00000000468) #10	HHIP (ENSMLUG00000009326) #17	ANAPC10 (ENSMLUG00000008607) #18	ABCE1 (ENSMLUG00000008618) #19	OTUD4 (ENSMLUG00000008637) #20	SMAD1 (ENSMLUG00000012261) #22	MMAA (ENSMLUG00000008078) #23	ZNF827 (ENSMLUG00000008100) #26	LSM6 (ENSMLUG00000026355) #27	ENSMLUG00000022646 #29	ENSMLUG00000015165 #29	POU4F2 (ENSMLUG00000015174) #30	TTC29 (ENSMLUG00000015176) #31	EDNRA (ENSMLUG00000002880) #32	TMEM184C (ENSMLUG00000014055) #33	PRMT9 (ENSMLUG00000014060) #34	ARHGAP10 (ENSMLUG00000008067) #36	NR3C2 (ENSMLUG00000008108) #37	DCLK2 (ENSMLUG00000016144)	ENSMLUG00000016161	MAB21L2 (ENSMLUG00000016197)
Megabat	MODERN SPECIES	7171																SMAD1 (ENSPVAG00000014298) #22	MMAA (ENSPVAG00000014299) #23	ZNF827 (ENSPVAG00000014300) #26
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154391.a.a #22
Hedgehog	MODERN SPECIES	6548																SMAD1 (ENSEEUG00000008384) #22
Common shrew	MODERN SPECIES	5098																SMAD1 (ENSSARG00000002650) #22
Atlantogenata	ANCESTRAL SPECIES	49	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000154895.a.a	ENSGT00940000154778	ENSGT01050000244827.C.c.a.a
Afrotheria	ANCESTRAL SPECIES	93					ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000154895.a.a	ENSGT00940000154778	ENSGT01050000244827.C.c.a.a	ENSGT00390000018433.s.b
Afrotheria_a	ANCESTRAL SPECIES	97					ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000154895.a.a	ENSGT00940000154778	ENSGT01050000244827.C.c.a.a	ENSGT00390000018433.s.b
Elephant	MODERN SPECIES	436					RNF150 (ENSLAFG00000002690)	ZNF330 (ENSLAFG00000002230)	IL15 (ENSLAFG00000008638)	INPP4B (ENSLAFG00000017626)	USP38 (ENSLAFG00000015972) #7	GAB1 (ENSLAFG00000002429) #8	SMARCA5 (ENSLAFG00000007795) #10	HHIP (ENSLAFG00000010367) #17	ANAPC10 (ENSLAFG00000009176) #18	ABCE1 (ENSLAFG00000017970) #19	OTUD4 (ENSLAFG00000011317) #20	SMAD1 (ENSLAFG00000018345) #22	MMAA (ENSLAFG00000031958) #23	ZNF827 (ENSLAFG00000029831) #26	LSM6 (ENSLAFG00000001952) #27	SLC10A7 (ENSLAFG00000000502) #29	POU4F2 (ENSLAFG00000001505) #30	TTC29 (ENSLAFG00000007613) #31	ENSLAFG00000026497	EDNRA (ENSLAFG00000008408) #32	TMEM184C (ENSLAFG00000030924) #33	PRMT9 (ENSLAFG00000010140) #34	ARHGAP10 (ENSLAFG00000002896) #36	NR3C2 (ENSLAFG00000022550) #37	ENSLAFG00000006909	DCLK2 (ENSLAFG00000014123)	MAB21L2 (ENSLAFG00000014147)
Hyrax	MODERN SPECIES	5374																SMAD1 (ENSPCAG00000009132) #22
Tenrec	MODERN SPECIES	6360																SMAD1 (ENSETEG00000016533) #22
Xenarthra	ANCESTRAL SPECIES	438												ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30
Armadillo	MODERN SPECIES	1378								ENSDNOG00000016686 #16	ENSDNOG00000034839	ENSDNOG00000045504	HHIP (ENSDNOG00000004007) #17	ANAPC10 (ENSDNOG00000036797) #18	ABCE1 (ENSDNOG00000011807) #19	OTUD4 (ENSDNOG00000032001) #20	ENSDNOG00000038190	SMAD1 (ENSDNOG00000048112) #22	MMAA (ENSDNOG00000002302) #23	ENSDNOG00000040403	ZNF827 (ENSDNOG00000004889) #26	ENSDNOG00000040186 #27	REELD1 (ENSDNOG00000034287) #28	SLC10A7 (ENSDNOG00000046511) #29	POU4F2 (ENSDNOG00000013134) #30
Sloth	MODERN SPECIES	5828																SMAD1 (ENSCHOG00000009259) #22
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877	ENSGT00390000010038
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00940000157878	ENSGT00940000156171.c	ENSGT00940000156171.d	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00520000060562 #25	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00390000010038	ENSGT00940000154895.a.a
Diprotodontia	ANCESTRAL SPECIES	53	ENSGT00940000157878	ENSGT00940000156171.c	ENSGT00940000156171.d	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877	ENSGT00940000154895.a.a	ENSGT00940000154778
Diprotodontia_a	ANCESTRAL SPECIES	50	ENSGT00940000157878	ENSGT00940000156171.c	ENSGT00940000156171.d	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00950000186280	ENSGT00940000158403 #7	ENSGT00940000156801 #8	ENSGT00940000156733 #10	ENSGT00940000162501 #11	ENSGT00940000158660 #17	ENSGT00390000013722 #18	ENSGT00390000015089 #19	ENSGT00940000160512 #20	ENSGT00940000154391.a.a #22	ENSGT00390000009908 #23	ENSGT00940000156063 #26	ENSGT00940000154978 #27	ENSGT00940000163277 #28	ENSGT00390000011932 #29	ENSGT00940000160339 #30	ENSGT00390000008611 #31	ENSGT01100000263512.a.a.b #32	ENSGT00940000155201 #33	ENSGT00940000158472 #34	ENSGT00940000159559 #36	ENSGT00940000159333 #37	ENSGT00940000167877	ENSGT00940000154895.a.a	ENSGT00940000154778
Common wonbat	MODERN SPECIES	1022	RNF150 (ENSVURG00010009942)	ENSVURG00010010021	ZNF330 (ENSVURG00010010035)	IL15 (ENSVURG00010010052)	INPP4B (ENSVURG00010010079)	USP38 (ENSVURG00010010143) #7	GAB1 (ENSVURG00010010165) #8	SMARCA5 (ENSVURG00010010208) #10	ENSVURG00010010267 #11	ENSVURG00010010354	ENSVURG00010010360	HHIP (ENSVURG00010010374) #17	ANAPC10 (ENSVURG00010010401) #18	ABCE1 (ENSVURG00010010434) #19	OTUD4 (ENSVURG00010010453) #20	SMAD1 (ENSVURG00010010474) #22	MMAA (ENSVURG00010010489) #23	ZNF827 (ENSVURG00010010514) #26	LSM6 (ENSVURG00010010584) #27	ENSVURG00010010563 #28	SLC10A7 (ENSVURG00010010610) #29	POU4F2 (ENSVURG00010010622) #30	ENSVURG00010010639	EDNRA (ENSVURG00010010650) #32	TMEM184C (ENSVURG00010010697) #33	PRMT9 (ENSVURG00010010735) #34	ARHGAP10 (ENSVURG00010011572) #36	NR3C2 (ENSVURG00010011631) #37	DCLK2 (ENSVURG00010011680)	LRBA (ENSVURG00010011737)	MAB21L2 (ENSVURG00010011850)
koala	MODERN SPECIES	338													ENSPCIG00000010567 #18	ABCE1 (ENSPCIG00000010571) #19	OTUD4 (ENSPCIG00000010579) #20	SMAD1 (ENSPCIG00000013525) #22	MMAA (ENSPCIG00000034158) #23	ZNF827 (ENSPCIG00000033175) #26	LSM6 (ENSPCIG00000023469) #27	ENSPCIG00000023470 #28	SLC10A7 (ENSPCIG00000023473) #29	POU4F2 (ENSPCIG00000023474) #30
Wallaby	MODERN SPECIES	7889																SMAD1 (ENSMEUG00000006332) #22
Tasmanian devil	MODERN SPECIES	5	ELMOD2 (ENSSHAG00000018184)	UCP1 (ENSSHAG00000026436)	TBC1D9 (ENSSHAG00000024926)	RNF150 (ENSSHAG00000028359)	ZNF330 (ENSSHAG00000032038)	IL15 (ENSSHAG00000023836)	INPP4B (ENSSHAG00000015055)	USP38 (ENSSHAG00000011121) #7	GAB1 (ENSSHAG00000009133) #8	SMARCA5 (ENSSHAG00000008464) #10	ENSSHAG00000007475 #11	HHIP (ENSSHAG00000011890) #17	ANAPC10 (ENSSHAG00000009867) #18	ABCE1 (ENSSHAG00000009721) #19	OTUD4 (ENSSHAG00000009272) #20	SMAD1 (ENSSHAG00000006387) #22	MMAA (ENSSHAG00000004904) #23	ENSSHAG00000002949 #25	ZNF827 (ENSSHAG00000022259) #26	LSM6 (ENSSHAG00000030833) #27	SLC10A7 (ENSSHAG00000021517) #29	POU4F2 (ENSSHAG00000031646) #30	TTC29 (ENSSHAG00000012136) #31	EDNRA (ENSSHAG00000021466) #32	TMEM184C (ENSSHAG00000005159) #33	PRMT9 (ENSSHAG00000004097) #34	ARHGAP10 (ENSSHAG00000009355) #36	NR3C2 (ENSSHAG00000005709) #37	ENSSHAG00000020813	DCLK2 (ENSSHAG00000017194)	LRBA (ENSSHAG00000015402)
Opossum	MODERN SPECIES	4	TBC1D9 (ENSMODG00000000209)	ZNF330 (ENSMODG00000000223)	IL15 (ENSMODG00000041399)	INPP4B (ENSMODG00000000308)	ENSMODG00000029399	USP38 (ENSMODG00000000319) #7	GAB1 (ENSMODG00000000336) #8	SMARCA5 (ENSMODG00000000391) #10	ENSMODG00000000417 #11	ENSMODG00000027513	HHIP (ENSMODG00000000432) #17	ENSMODG00000027672	ANAPC10 (ENSMODG00000000439) #18	ABCE1 (ENSMODG00000000465) #19	OTUD4 (ENSMODG00000000487) #20	SMAD1 (ENSMODG00000000500) #22	MMAA (ENSMODG00000000508) #23	ENSMODG00000046196	ZNF827 (ENSMODG00000000520) #26	LSM6 (ENSMODG00000039383) #27	ENSMODG00000000547 #28	SLC10A7 (ENSMODG00000000522) #29	ENSMODG00000038208	POU4F2 (ENSMODG00000000557) #30	TTC29 (ENSMODG00000000583) #31	ENSMODG00000044089	EDNRA (ENSMODG00000000658) #32	TMEM184C (ENSMODG00000000670) #33	PRMT9 (ENSMODG00000000691) #34	ARHGAP10 (ENSMODG00000000772) #36	ENSMODG00000041040 #37