Mus	ANCESTRAL SPECIES	5	ENSGT00940000162583 #7	ENSGT00940000156374 #8	ENSGT00950000182974.a.a.a.b #9	ENSGT00440000033329.b.a.a #10	ENSGT00940000157128 #11	ENSGT00510000049213 #12	ENSGT00940000154295 #13	ENSGT00940000160744 #14	ENSGT00950000183030.m.a.a.a.b #15	ENSGT00940000158977 #16	ENSGT00390000006356 #17	ENSGT00940000161020 #18	ENSGT00390000005914.b #19	ENSGT01050000244879.b.a.a #20	ENSGT00860000135990 #21	ENSGT00940000155063 #22	ENSGT01090000259985.b.b.b.a.a.b #23	ENSGT01090000259985.b.a.b.a.b #24	ENSGT01090000259985.b.a.b.a.a #25	ENSGT00960000191981	ENSGT01090000259985.b.a.a.a #26	ENSGT01090000259985.b.b.a.a #27	ENSGT01090000259985.b.b.a.b #28	ENSGT00940000160774 #29	ENSGT00940000156807 #30	ENSGT00940000159390 #31	ENSGT00390000017581.b #32	ENSGT00940000163665 #33	ENSGT00390000011204 #34	ENSGT00950000183001.a.b.b #35	ENSGT00530000063596.A #36
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000162583 #7	ENSGT00940000156374 #8	ENSGT00950000182974.a.a.a.b #9	ENSGT00440000033329.b.a.a #10	ENSGT00940000157128 #11	ENSGT00510000049213 #12	ENSGT00940000154295 #13	ENSGT00940000160744 #14	ENSGT00950000183030.m.a.a.a.b #15	ENSGT00940000158977 #16	ENSGT00390000006356 #17	ENSGT00940000161020 #18	ENSGT00390000005914.b #19	ENSGT01050000244879.b.a.a #20	ENSGT00860000135990 #21	ENSGT00940000155063 #22	ENSGT01090000259985.b.b.b.a.a.b #23	ENSGT01090000259985.b.a.b.a.b #24	ENSGT01090000259985.b.a.b.a.a #25	ENSGT00960000191981	ENSGT01090000259985.b.a.a.a #26	ENSGT01090000259985.b.b.a.a #27	ENSGT01090000259985.b.b.a.b #28	ENSGT00940000160774 #29	ENSGT00940000156807 #30	ENSGT00940000159390 #31	ENSGT00390000017581.b #32	ENSGT00940000163665 #33	ENSGT00390000011204 #34	ENSGT00950000183001.a.b.b #35	ENSGT00530000063596.A #36
Mus_B	ANCESTRAL SPECIES	21	ENSGT00940000162583 #7	ENSGT00940000156374 #8	ENSGT00950000182974.a.a.a.b #9	ENSGT00440000033329.b.a.a #10	ENSGT00940000157128 #11	ENSGT00510000049213 #12	ENSGT00940000154295 #13	ENSGT00940000160744 #14	ENSGT00950000183030.m.a.a.a.b #15	ENSGT00940000158977 #16	ENSGT00390000006356 #17	ENSGT00940000161020 #18	ENSGT00390000005914.b #19	ENSGT01050000244879.b.a.a #20	ENSGT00860000135990 #21	ENSGT00940000155063 #22	ENSGT01090000259985.b.b.b.a.a.b #23	ENSGT01090000259985.b.a.b.a.b #24	ENSGT01090000259985.b.a.b.a.a #25	ENSGT00960000191981	ENSGT01090000259985.b.a.a.a #26	ENSGT01090000259985.b.b.a.a #27	ENSGT01090000259985.b.b.a.b #28	ENSGT00940000160774 #29	ENSGT00940000156807 #30	ENSGT00940000159390 #31	ENSGT00390000017581.b #32	ENSGT00940000163665 #33	ENSGT00390000011204 #34	ENSGT00950000183001.a.b.b #35	ENSGT00530000063596.A #36
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000162583 #7	ENSGT00940000156374 #8	ENSGT00950000182974.a.a.a.b #9	ENSGT00440000033329.b.a.a #10	ENSGT00940000157128 #11	ENSGT00510000049213 #12	ENSGT00940000154295 #13	ENSGT00940000160744 #14	ENSGT00950000183030.m.a.a.a.b #15	ENSGT00940000158977 #16	ENSGT00390000006356 #17	ENSGT00940000161020 #18	ENSGT00390000005914.b #19	ENSGT01050000244879.b.a.a #20	ENSGT00860000135990 #21	ENSGT00940000155063 #22	ENSGT01090000259985.b.b.b.a.a.b #23	ENSGT01090000259985.b.a.b.a.b #24	ENSGT01090000259985.b.a.b.a.a #25	ENSGT00960000191981	ENSGT01090000259985.b.a.a.a #26	ENSGT01090000259985.b.b.a.a #27	ENSGT01090000259985.b.b.a.b #28	ENSGT00940000160774 #29	ENSGT00940000156807 #30	ENSGT00940000159390 #31	ENSGT00390000017581.b #32	ENSGT00940000163665 #33	ENSGT00390000011204 #34	ENSGT00950000183001.a.b.b #35	ENSGT00530000063596.A #36
spretus	MODERN SPECIES		Eif5b (MGP_SPRETEiJ_G0014865) #7	Rev1 (MGP_SPRETEiJ_G0014866) #8	Aff3 (MGP_SPRETEiJ_G0014867) #9	Lonrf2 (MGP_SPRETEiJ_G0014868) #10	Chst10 (MGP_SPRETEiJ_G0014869) #11	Nms (MGP_SPRETEiJ_G0014870) #12	Pdcl3 (MGP_SPRETEiJ_G0014871) #13	Npas2 (MGP_SPRETEiJ_G0014872) #14	Rpl31 (MGP_SPRETEiJ_G0014873) #15	Tbc1d8 (MGP_SPRETEiJ_G0014874) #16	Cnot11 (MGP_SPRETEiJ_G0014875) #17	Rnf149 (MGP_SPRETEiJ_G0014876) #18	Creg2 (MGP_SPRETEiJ_G0014877) #19	Rfx8 (MGP_SPRETEiJ_G0014878) #20	MGP_SPRETEiJ_G0014879 #21	Map4k4 (MGP_SPRETEiJ_G0014880) #22	MGP_SPRETEiJ_G0014881 #23	Il1r1 (MGP_SPRETEiJ_G0014882) #24	Il1rl2 (MGP_SPRETEiJ_G0014883) #25	Il1rl1 (MGP_SPRETEiJ_G0014884) #26	Il18r1 (MGP_SPRETEiJ_G0014885) #27	Il18rap (MGP_SPRETEiJ_G0014886) #28	Slc9a4 (MGP_SPRETEiJ_G0014887) #29	Slc9a2 (MGP_SPRETEiJ_G0014888) #30	Mfsd9 (MGP_SPRETEiJ_G0014889) #31	Tmem182 (MGP_SPRETEiJ_G0014890) #32	Pou3f3 (MGP_SPRETEiJ_G0014891) #33	Mrps9 (MGP_SPRETEiJ_G0014892) #34	Gpr45 (MGP_SPRETEiJ_G0014893) #35	Tgfbrap1 (MGP_SPRETEiJ_G0014894) #36	AI597479 (MGP_SPRETEiJ_G0014895) #37
Steppe mouse	MODERN SPECIES	3348		Aff3 (ENSMSIG00000021936) #9	Lonrf2 (ENSMSIG00000022046) #10	Chst10 (ENSMSIG00000022069) #11	Nms (ENSMSIG00000022133) #12	Pdcl3 (ENSMSIG00000022157) #13	ENSMSIG00000022177	Npas2 (ENSMSIG00000022192) #14	Rpl31 (ENSMSIG00000022245) #15	Tbc1d8 (ENSMSIG00000022280) #16	Cnot11 (ENSMSIG00000022348) #17	Rnf149 (ENSMSIG00000022375) #18	Creg2 (ENSMSIG00000022406) #19	Rfx8 (ENSMSIG00000022417) #20	ENSMSIG00000022440 #21	Map4k4 (ENSMSIG00000022455) #22	Il1r2 (ENSMSIG00000025031) #23	Il1r1 (ENSMSIG00000025043) #24	Il1rl2 (ENSMSIG00000025067) #25	ENSMSIG00000025093	Il1rl1 (ENSMSIG00000025096) #26	Il18r1 (ENSMSIG00000025150) #27	Il18rap (ENSMSIG00000025343) #28	Slc9a4 (ENSMSIG00000025357) #29	Slc9a2 (ENSMSIG00000025415) #30	Mfsd9 (ENSMSIG00000025439) #31	Tmem182 (ENSMSIG00000025450) #32	ENSMSIG00000025470	ENSMSIG00000025480	Mrps9 (ENSMSIG00000025504) #34	Gpr45 (ENSMSIG00000025534) #35
Mouse	MODERN SPECIES		Txndc9 (ENSMUSG00000058407)	Eif5b (ENSMUSG00000026083) #7	Rev1 (ENSMUSG00000026082) #8	Aff3 (ENSMUSG00000037138) #9	Lonrf2 (ENSMUSG00000048814) #10	Chst10 (ENSMUSG00000026080) #11	Nms (ENSMUSG00000067604) #12	Pdcl3 (ENSMUSG00000026078) #13	Npas2 (ENSMUSG00000026077) #14	Rpl31 (ENSMUSG00000073702) #15	Tbc1d8 (ENSMUSG00000003134) #16	Cnot11 (ENSMUSG00000003135) #17	Rnf149 (ENSMUSG00000048234) #18	Creg2 (ENSMUSG00000050967) #19	Rfx8 (ENSMUSG00000057173) #20	Map4k4 (ENSMUSG00000026074) #22	Il1r2 (ENSMUSG00000026073) #23	Il1r1 (ENSMUSG00000026072) #24	Il1rl2 (ENSMUSG00000070942) #25	Il1rl1 (ENSMUSG00000026069) #26	Il18r1 (ENSMUSG00000026070) #27	Il18rap (ENSMUSG00000026068) #28	Slc9a4 (ENSMUSG00000026065) #29	Slc9a2 (ENSMUSG00000026062) #30	Mfsd9 (ENSMUSG00000041945) #31	Tmem182 (ENSMUSG00000079588) #32	Pou3f3 (ENSMUSG00000045515) #33	Mrps9 (ENSMUSG00000060679) #34	Gpr45 (ENSMUSG00000041907) #35	Tgfbrap1 (ENSMUSG00000070939) #36	AI597479 (ENSMUSG00000010290) #37
Ryukyu mouse	MODERN SPECIES		Eif5b (MGP_CAROLIEiJ_G0014061) #7	Rev1 (MGP_CAROLIEiJ_G0014062) #8	Aff3 (MGP_CAROLIEiJ_G0014063) #9	MGP_CAROLIEiJ_G0014064 #10	MGP_CAROLIEiJ_G0014065 #11	Nms (MGP_CAROLIEiJ_G0014066) #12	Pdcl3 (MGP_CAROLIEiJ_G0014067) #13	Npas2 (MGP_CAROLIEiJ_G0014068) #14	Rpl31 (MGP_CAROLIEiJ_G0014069) #15	Tbc1d8 (MGP_CAROLIEiJ_G0014070) #16	Cnot11 (MGP_CAROLIEiJ_G0014071) #17	Rnf149 (MGP_CAROLIEiJ_G0014072) #18	Creg2 (MGP_CAROLIEiJ_G0014073) #19	Rfx8 (MGP_CAROLIEiJ_G0014074) #20	MGP_CAROLIEiJ_G0014075 #21	Map4k4 (MGP_CAROLIEiJ_G0014076) #22	Il1r2 (MGP_CAROLIEiJ_G0014077) #23	Il1r1 (MGP_CAROLIEiJ_G0014078) #24	Il1rl2 (MGP_CAROLIEiJ_G0014079) #25	Il1rl1 (MGP_CAROLIEiJ_G0014080) #26	Il18r1 (MGP_CAROLIEiJ_G0014081) #27	Il18rap (MGP_CAROLIEiJ_G0014082) #28	Slc9a4 (MGP_CAROLIEiJ_G0014083) #29	Slc9a2 (MGP_CAROLIEiJ_G0014084) #30	Mfsd9 (MGP_CAROLIEiJ_G0014085) #31	Tmem182 (MGP_CAROLIEiJ_G0014086) #32	Pou3f3 (MGP_CAROLIEiJ_G0014087) #33	Mrps9 (MGP_CAROLIEiJ_G0014088) #34	Gpr45 (MGP_CAROLIEiJ_G0014089) #35	Tgfbrap1 (MGP_CAROLIEiJ_G0014090) #36	AI597479 (MGP_CAROLIEiJ_G0014091) #37
Shrew mouse	MODERN SPECIES	18	Lyg1 (MGP_PahariEiJ_G0027306)	Txndc9 (MGP_PahariEiJ_G0027307)	Eif5b (MGP_PahariEiJ_G0027308) #7	Rev1 (MGP_PahariEiJ_G0027309) #8	Aff3 (MGP_PahariEiJ_G0027310) #9	Lonrf2 (MGP_PahariEiJ_G0027311) #10	Chst10 (MGP_PahariEiJ_G0027312) #11	Nms (MGP_PahariEiJ_G0027313) #12	Pdcl3 (MGP_PahariEiJ_G0027314) #13	Npas2 (MGP_PahariEiJ_G0027315) #14	MGP_PahariEiJ_G0027316 ##15	Tbc1d8 (MGP_PahariEiJ_G0027317) #16	Cnot11 (MGP_PahariEiJ_G0027318) #17	Rnf149 (MGP_PahariEiJ_G0027319) #18	MGP_PahariEiJ_G0027320 #21	Map4k4 (MGP_PahariEiJ_G0027321) #22	Il1r2 (MGP_PahariEiJ_G0027322) #23	Il1r1 (MGP_PahariEiJ_G0027323) #24	MGP_PahariEiJ_G0027324 ##28	Il1rl1 (MGP_PahariEiJ_G0027325) #26	Il18r1 (MGP_PahariEiJ_G0027326) #27	Il18rap (MGP_PahariEiJ_G0027327) #28	Slc9a4 (MGP_PahariEiJ_G0027328) #29	Slc9a2 (MGP_PahariEiJ_G0027329) #30	Mfsd9 (MGP_PahariEiJ_G0027330) #31	Tmem182 (MGP_PahariEiJ_G0027331) #32	Pou3f3 (MGP_PahariEiJ_G0027332) #33	Mrps9 (MGP_PahariEiJ_G0027333) #34	Gpr45 (MGP_PahariEiJ_G0027334) #35	Tgfbrap1 (MGP_PahariEiJ_G0027335) #36	AI597479 (MGP_PahariEiJ_G0027336) #37