Euteleostomi ANCESTRAL SPECIES 3 ENSGT00940000165617 ENSGT00550000074800 ENSGT00940000163195.B ENSGT01090000260278 ENSGT00390000002753 ENSGT00940000158859 ENSGT01030000234607.B ENSGT00940000157954 ENSGT00940000165303 ENSGT00390000007741.b ENSGT00940000155863 ENSGT00940000159106 ENSGT00830000128380 ENSGT00390000000227 ENSGT00950000183075.a.b ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00940000159309 ENSGT00940000160673 ENSGT00390000017846 ENSGT00940000155526 ENSGT00390000008686.d ENSGT00950000182984.b.a.b ENSGT00940000159683 ENSGT00390000012728 ENSGT00950000183197.b.b ENSGT00940000155442 ENSGT00940000155963 ENSGT00900000142763 ENSGT00390000007069 ENSGT00940000157735 Sarcopterygii ANCESTRAL SPECIES 25 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030 ENSGT00960000186941 ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000164385.a.a.a.b ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 ENSGT00940000157728.b ENSGT00390000000145 ENSGT00940000157868 Tetrapoda ANCESTRAL SPECIES ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030 ENSGT00960000186941 ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000164385.a.a.a.b ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 ENSGT00940000157728.b Amniota ANCESTRAL SPECIES ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT01020000230360.c.b.b ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Mammalia ANCESTRAL SPECIES ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT01020000230360.c.b.b ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Theria ANCESTRAL SPECIES 1 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Eutheria ANCESTRAL SPECIES 17 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Boreoeutheria ANCESTRAL SPECIES 15 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Euarchontoglires ANCESTRAL SPECIES 15 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Euarchontoglires_A ANCESTRAL SPECIES 14 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Glires ANCESTRAL SPECIES 13 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Rodentia ANCESTRAL SPECIES 15 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Rodentia_A ANCESTRAL SPECIES 14 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Sciuridae ANCESTRAL SPECIES 61 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Marmotini ANCESTRAL SPECIES 103 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Alpin marmot MODERN SPECIES 99 CNOT11 (ENSMMMG00000019519) #18 ENSMMMG00000019511 #19 CREG2 (ENSMMMG00000019502) #20 RFX8 (ENSMMMG00000019489) #21 MAP4K4 (ENSMMMG00000019140) #22 IL1R2 (ENSMMMG00000019123) #23 IL1R1 (ENSMMMG00000019096) #24 IL1RL2 (ENSMMMG00000019064) #25 IL1RL1 (ENSMMMG00000019023) #26 IL18R1 (ENSMMMG00000018982) #27 IL18RAP (ENSMMMG00000018945) #28 SLC9A4 (ENSMMMG00000018936) #29 SLC9A2 (ENSMMMG00000018920) #30 MFSD9 (ENSMMMG00000018912) #31 TMEM182 (ENSMMMG00000018908) #32 MRPS9 (ENSMMMG00000018867) #33 GPR45 (ENSMMMG00000018860) #34 TGFBRAP1 (ENSMMMG00000018810) #35 C2orf49 (ENSMMMG00000018804) #36 FHL2 (ENSMMMG00000018792) #37 Marmotini_b ANCESTRAL SPECIES 214 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 Arctic ground squirrel MODERN SPECIES 389 CNOT11 (ENSUPAG00010008934) #18 RNF149 (ENSUPAG00010008945) #19 ENSUPAG00010008977 CREG2 (ENSUPAG00010008997) #20 RFX8 (ENSUPAG00010009009) #21 MAP4K4 (ENSUPAG00010009052) #22 IL1R2 (ENSUPAG00010010625) #23 IL1R1 (ENSUPAG00010010814) #24 IL1RL2 (ENSUPAG00010010855) #25 ENSUPAG00010010880 #26 IL18R1 (ENSUPAG00010010899) #27 IL18RAP (ENSUPAG00010010926) #28 SLC9A4 (ENSUPAG00010010967) #29 SLC9A2 (ENSUPAG00010010983) #30 MFSD9 (ENSUPAG00010011005) #31 TMEM182 (ENSUPAG00010011013) #32 Squirrel MODERN SPECIES 313 CNOT11 (ENSSTOG00000002674) #18 RNF149 (ENSSTOG00000002701) #19 CREG2 (ENSSTOG00000005261) #20 RFX8 (ENSSTOG00000005252) #21 MAP4K4 (ENSSTOG00000012689) #22 IL1R2 (ENSSTOG00000008491) #23 IL1R1 (ENSSTOG00000022224) #24 IL1RL2 (ENSSTOG00000004136) #25 IL1RL1 (ENSSTOG00000004162) #26 IL18R1 (ENSSTOG00000004181) #27 SLC9A4 (ENSSTOG00000004218) #29 SLC9A2 (ENSSTOG00000004249) #30 MFSD9 (ENSSTOG00000026538) #31 TMEM182 (ENSSTOG00000021121) #32 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 3 PIP4K2A (ENSSVLG00005018202) ARMC3 (ENSSVLG00005017564) MSRB2 (ENSSVLG00005017505) PTF1A (ENSSVLG00005017462) ENSSVLG00005017420 OTUD1 (ENSSVLG00005016919) KIAA1217 (ENSSVLG00005015769) ARHGAP21 (ENSSVLG00005014772) ENSSVLG00005014651 PRTFDC1 (ENSSVLG00005014583) ENKUR (ENSSVLG00005014473) THNSL1 (ENSSVLG00005014444) ENSSVLG00005014402 GPR158 (ENSSVLG00005014159) ENSSVLG00005014103 ENSSVLG00005014026 #22 GAD2 (ENSSVLG00005013824) APBB1IP (ENSSVLG00005013617) ENSSVLG00005013262 PDSS1 (ENSSVLG00005013153) ABI1 (ENSSVLG00005012684) ENSSVLG00005012546 ACBD5 (ENSSVLG00005012182) MASTL (ENSSVLG00005011787) YME1L1 (ENSSVLG00005011675) ENSSVLG00005011610 CCDC3 (ENSSVLG00005011541) ENSSVLG00005011462 CAMK1D (ENSSVLG00005011210) CDC123 (ENSSVLG00005011124) NUDT5 (ENSSVLG00005011015) Eurasian red squirrel MODERN SPECIES 5 ENSSVLG00005017910 ST6GAL2 (ENSSVLG00005017851) ENSSVLG00005017814 SLC5A7 (ENSSVLG00005017705) ENSSVLG00005017658 ENSSVLG00005017620 ENSSVLG00005017536 ENSSVLG00005017486 ENSSVLG00005017437 ENSSVLG00005017192 ENSSVLG00005017114 CNOT11 (ENSSVLG00005017020) #18 RNF149 (ENSSVLG00005016973) #19 CREG2 (ENSSVLG00005016917) #20 RFX8 (ENSSVLG00005016773) #21 MAP4K4 (ENSSVLG00005016510) #22 IL1R2 (ENSSVLG00005016305) #23 IL1R1 (ENSSVLG00005016023) #24 IL1RL2 (ENSSVLG00005015833) #25 ENSSVLG00005015618 #26 IL18R1 (ENSSVLG00005015483) #27 IL18RAP (ENSSVLG00005015196) #28 SLC9A4 (ENSSVLG00005015058) #29 SLC9A2 (ENSSVLG00005014903) #30 MFSD9 (ENSSVLG00005014829) #31 TMEM182 (ENSSVLG00005014677) #32 POU3F3 (ENSSVLG00005014648) MRPS9 (ENSSVLG00005014535) #33 GPR45 (ENSSVLG00005014512) #34 TGFBRAP1 (ENSSVLG00005014478) #35 C2orf49 (ENSSVLG00005014398) #36 Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00390000017614.j ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Hystricomorpha_a ANCESTRAL SPECIES 52 ENSGT00390000017614.j ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Hystricomorpha_b ANCESTRAL SPECIES 59 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295.o ENSGT00940000160744 ENSGT00950000183030.m.a.a.b.b.a.a.b ENSGT00950000183030.m.a.a.b.b.a.b.b.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Long-tailed chinchilla MODERN SPECIES 177 LYG2 (ENSCLAG00000006394) LYG1 (ENSCLAG00000006423) TXNDC9 (ENSCLAG00000006644) EIF5B (ENSCLAG00000007674) REV1 (ENSCLAG00000009243) AFF3 (ENSCLAG00000017100) CHST10 (ENSCLAG00000003206) NMS (ENSCLAG00000004166) ENSCLAG00000004610 NPAS2 (ENSCLAG00000006228) RPL31 (ENSCLAG00000006775) TBC1D8 (ENSCLAG00000013253) ENSCLAG00000014249 #18 ENSCLAG00000008966 #19 RFX8 (ENSCLAG00000009461) #21 MAP4K4 (ENSCLAG00000008989) #22 IL1R2 (ENSCLAG00000003202) #23 ENSCLAG00000003425 #24 IL1RL2 (ENSCLAG00000003870) #25 ENSCLAG00000004065 #26 IL18R1 (ENSCLAG00000004416) #27 IL18RAP (ENSCLAG00000005267) #28 SLC9A4 (ENSCLAG00000005526) #29 SLC9A2 (ENSCLAG00000004660) #30 MFSD9 (ENSCLAG00000004767) #31 TMEM182 (ENSCLAG00000004968) #32 MRPS9 (ENSCLAG00000005209) #33 GPR45 (ENSCLAG00000017756) #34 TGFBRAP1 (ENSCLAG00000005507) #35 C2orf49 (ENSCLAG00000005595) #36 FHL2 (ENSCLAG00000008685) #37 Degu MODERN SPECIES 93 ENSODEG00000008190 ENSODEG00000008333 REV1 (ENSODEG00000008237) ENSODEG00000007806 ENSODEG00000010897 CHST10 (ENSODEG00000008815) NMS (ENSODEG00000007962) ENSODEG00000007395 ENSODEG00000009555 ENSODEG00000007744 TBC1D8 (ENSODEG00000010987) ENSODEG00000009367 CNOT11 (ENSODEG00000007133) #18 CREG2 (ENSODEG00000008331) #20 RFX8 (ENSODEG00000008257) #21 MAP4K4 (ENSODEG00000007726) #22 IL1R1 (ENSODEG00000009505) #24 IL1RL2 (ENSODEG00000008598) #25 IL1RL1 (ENSODEG00000007332) #26 IL18R1 (ENSODEG00000007946) #27 SLC9A4 (ENSODEG00000010039) #29 SLC9A2 (ENSODEG00000011273) #30 MFSD9 (ENSODEG00000008325) #31 TMEM182 (ENSODEG00000009218) #32 POU3F3 (ENSODEG00000008245) MRPS9 (ENSODEG00000008818) #33 GPR45 (ENSODEG00000019888) #34 ENSODEG00000008779 #35 C2orf49 (ENSODEG00000009180) #36 FHL2 (ENSODEG00000008211) #37 NCK2 (ENSODEG00000008391) Guinea pig MODERN SPECIES 24 LYG1 (ENSCPOG00000040702) TXNDC9 (ENSCPOG00000035803) ENSCPOG00000011967 REV1 (ENSCPOG00000011981) AFF3 (ENSCPOG00000006346) CHST10 (ENSCPOG00000006356) NMS (ENSCPOG00000004100) PDCL3 (ENSCPOG00000033717) ENSCPOG00000034101 ENSCPOG00000021031 TBC1D8 (ENSCPOG00000027502) CNOT11 (ENSCPOG00000012029) #18 RNF149 (ENSCPOG00000022648) #19 CREG2 (ENSCPOG00000010561) #20 RFX8 (ENSCPOG00000002640) #21 MAP4K4 (ENSCPOG00000011630) #22 IL1R2 (ENSCPOG00000037563) #23 IL1R1 (ENSCPOG00000032016) #24 IL1RL2 (ENSCPOG00000003204) #25 IL1RL1 (ENSCPOG00000013443) #26 IL18R1 (ENSCPOG00000022527) #27 IL18RAP (ENSCPOG00000014120) #28 SLC9A4 (ENSCPOG00000033768) #29 SLC9A2 (ENSCPOG00000007613) #30 MFSD9 (ENSCPOG00000035138) #31 TMEM182 (ENSCPOG00000007626) #32 ENSCPOG00000003373 MRPS9 (ENSCPOG00000013967) #33 GPR45 (ENSCPOG00000035701) #34 TGFBRAP1 (ENSCPOG00000001606) #35 C2orf49 (ENSCPOG00000034878) #36 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 27 ENSHGLG00000013293 ENSHGLG00000038637 ENSHGLG00000011626 ENSHGLG00000008277 ENSHGLG00000036882 ARHGAP21 (ENSHGLG00000008443) ENKUR (ENSHGLG00000005349) ENSHGLG00000004916 ENSHGLG00000045437 ENSHGLG00000044566 ENSHGLG00000047037 ENSHGLG00000044474 ENSHGLG00000034504 ENSHGLG00000040816 ENSHGLG00000004801 ENSHGLG00000048157 #22 MYO3A (ENSHGLG00000008329) GAD2 (ENSHGLG00000007030) APBB1IP (ENSHGLG00000006286) PDSS1 (ENSHGLG00000004870) ENSHGLG00000009383 ENSHGLG00000049879 ENSHGLG00000038882 ENSHGLG00000009411 ENSHGLG00000008066 ENSHGLG00000048158 ENSHGLG00000050062 ENSHGLG00000047345 Naked mole-rat female MODERN SPECIES 23 REV1 (ENSHGLG00000016395) ENSHGLG00000005004 ENSHGLG00000034304 ENSHGLG00000047132 ENSHGLG00000006594 ENSHGLG00000046670 PDCL3 (ENSHGLG00000038612) ENSHGLG00000050067 ENSHGLG00000010608 NPAS2 (ENSHGLG00000015275) RPL31 (ENSHGLG00000034864) TBC1D8 (ENSHGLG00000005052) CNOT11 (ENSHGLG00000005196) #18 CREG2 (ENSHGLG00000045007) #20 RFX8 (ENSHGLG00000009282) #21 MAP4K4 (ENSHGLG00000010571) #22 ENSHGLG00000041789 IL1R2 (ENSHGLG00000014764) #23 ENSHGLG00000042381 ENSHGLG00000036054 ENSHGLG00000046327 IL1R1 (ENSHGLG00000035160) #24 IL1RL2 (ENSHGLG00000006830) #25 IL1RL1 (ENSHGLG00000009148) #26 IL18R1 (ENSHGLG00000014630) #27 IL18RAP (ENSHGLG00000040342) #28 SLC9A4 (ENSHGLG00000015136) #29 SLC9A2 (ENSHGLG00000016134) #30 ENSHGLG00000036196 #31 TMEM182 (ENSHGLG00000048689) #32 ENSHGLG00000004651 Rodentia_B ANCESTRAL SPECIES 36 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Myomorpha ANCESTRAL SPECIES 40 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Muroidea ANCESTRAL SPECIES 45 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Muroidea_A ANCESTRAL SPECIES 8 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Cricetidae ANCESTRAL SPECIES 9 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Cricetinae ANCESTRAL SPECIES 28 ENSGT00390000015645.g ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Chinese hamster chok1gshd MODERN SPECIES 165 ENSCGRG00001009957 Eif5b (ENSCGRG00001010937) Rev1 (ENSCGRG00001019272) Aff3 (ENSCGRG00001014566) Lonrf2 (ENSCGRG00001006964) Chst10 (ENSCGRG00001023533) Nms (ENSCGRG00001019460) Pdcl3 (ENSCGRG00001016908) Npas2 (ENSCGRG00001008921) ENSCGRG00001018894 Tbc1d8 (ENSCGRG00001020779) Cnot11 (ENSCGRG00001018815) #18 Rnf149 (ENSCGRG00001009277) #19 Creg2 (ENSCGRG00001008591) #20 Rfx8 (ENSCGRG00001019751) #21 Map4k4 (ENSCGRG00001014594) #22 Il1r2 (ENSCGRG00001012348) #23 Il1r1 (ENSCGRG00001008398) #24 Il1rl2 (ENSCGRG00001015507) #25 Il1rl1 (ENSCGRG00001000922) #26 Il18r1 (ENSCGRG00001003731) #27 Il18rap (ENSCGRG00001020521) #28 Slc9a4 (ENSCGRG00001013202) #29 Slc9a2 (ENSCGRG00001020868) #30 Mfsd9 (ENSCGRG00001020127) #31 Tmem182 (ENSCGRG00001013568) #32 Pou3f3 (ENSCGRG00001001262) Mrps9 (ENSCGRG00001012228) #33 Gpr45 (ENSCGRG00001001563) #34 Tgfbrap1 (ENSCGRG00001001074) #35 AI597479 (ENSCGRG00001000237) #36 Golden Hamster MODERN SPECIES 671 Lyg1 (ENSMAUG00000007748) Txndc9 (ENSMAUG00000013397) ENSMAUG00000016089 Rev1 (ENSMAUG00000019944) ENSMAUG00000013003 ENSMAUG00000004398 ENSMAUG00000012235 Chst10 (ENSMAUG00000000525) ENSMAUG00000002348 ENSMAUG00000014729 ENSMAUG00000012976 Tbc1d8 (ENSMAUG00000012769) Cnot11 (ENSMAUG00000008251) #18 Rnf149 (ENSMAUG00000022122) #19 Rfx8 (ENSMAUG00000022016) #21 Map4k4 (ENSMAUG00000009759) #22 Il1r2 (ENSMAUG00000019130) #23 Il1rl2 (ENSMAUG00000015098) #25 Il1rl1 (ENSMAUG00000013794) #26 Il18r1 (ENSMAUG00000018302) #27 Il18rap (ENSMAUG00000015985) #28 Slc9a4 (ENSMAUG00000011978) #29 Slc9a2 (ENSMAUG00000012644) #30 Mfsd9 (ENSMAUG00000019056) #31 Tmem182 (ENSMAUG00000008293) #32 Pou3f3 (ENSMAUG00000006830) Mrps9 (ENSMAUG00000014517) #33 Gpr45 (ENSMAUG00000020154) #34 Tgfbrap1 (ENSMAUG00000010940) #35 AI597479 (ENSMAUG00000009584) #36 Fhl2 (ENSMAUG00000007307) #37 Cricetidae_B ANCESTRAL SPECIES 12 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Prairie vole MODERN SPECIES 352 ENSMOCG00000005082 ENSMOCG00000005572 Lonrf2 (ENSMOCG00000017896) Chst10 (ENSMOCG00000016355) Nms (ENSMOCG00000008968) ENSMOCG00000007220 ENSMOCG00000015837 ENSMOCG00000003508 Rpl31 (ENSMOCG00000012618) Tbc1d8 (ENSMOCG00000020892) Cnot11 (ENSMOCG00000020059) #18 ENSMOCG00000022614 #19 ENSMOCG00000004327 Creg2 (ENSMOCG00000005255) #20 Rfx8 (ENSMOCG00000020079) #21 Map4k4 (ENSMOCG00000003196) #22 Il1r2 (ENSMOCG00000014917) #23 Il1r1 (ENSMOCG00000012872) #24 Il1rl2 (ENSMOCG00000021017) #25 Il1rl1 (ENSMOCG00000013141) #26 Il18r1 (ENSMOCG00000018379) #27 Il18rap (ENSMOCG00000000247) #28 Slc9a4 (ENSMOCG00000019168) #29 Slc9a2 (ENSMOCG00000001948) #30 Mfsd9 (ENSMOCG00000018562) #31 Tmem182 (ENSMOCG00000013151) #32 Mrps9 (ENSMOCG00000008753) #33 Gpr45 (ENSMOCG00000006013) #34 Tgfbrap1 (ENSMOCG00000017029) #35 AI597479 (ENSMOCG00000011309) #36 Fhl2 (ENSMOCG00000008372) #37 Northern American deer mouse MODERN SPECIES 13 Txndc9 (ENSPEMG00000014087) Eif5b (ENSPEMG00000030389) Rev1 (ENSPEMG00000001449) Aff3 (ENSPEMG00000014802) Lonrf2 (ENSPEMG00000020083) Chst10 (ENSPEMG00000025090) Nms (ENSPEMG00000019828) Pdcl3 (ENSPEMG00000013451) Npas2 (ENSPEMG00000027016) Rpl31 (ENSPEMG00000011336) ENSPEMG00000027601 Tbc1d8 (ENSPEMG00000009663) Rnf149 (ENSPEMG00000012870) #19 Creg2 (ENSPEMG00000004685) #20 Rfx8 (ENSPEMG00000000748) #21 Map4k4 (ENSPEMG00000011266) #22 Il1r2 (ENSPEMG00000005448) #23 Il1r1 (ENSPEMG00000015111) #24 Il1rl2 (ENSPEMG00000010586) #25 Il1rl1 (ENSPEMG00000000517) #26 Il18r1 (ENSPEMG00000020042) #27 Il18rap (ENSPEMG00000000406) #28 Slc9a4 (ENSPEMG00000017892) #29 Slc9a2 (ENSPEMG00000019513) #30 Mfsd9 (ENSPEMG00000016627) #31 Tmem182 (ENSPEMG00000027682) #32 ENSPEMG00000025331 ENSPEMG00000019460 Mrps9 (ENSPEMG00000020068) #33 ENSPEMG00000030538 Gpr45 (ENSPEMG00000012991) #34 Murinae ANCESTRAL SPECIES 9 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00860000135990 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT00960000191981 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Mus ANCESTRAL SPECIES 5 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00860000135990 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT00960000191981 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Mus_A ANCESTRAL SPECIES 5 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00860000135990 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT00960000191981 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Mus_B ANCESTRAL SPECIES 21 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00860000135990 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT00960000191981 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Mus_C ANCESTRAL SPECIES 1 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00860000135990 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT00960000191981 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Steppe mouse MODERN SPECIES 3348 Aff3 (ENSMSIG00000021936) Lonrf2 (ENSMSIG00000022046) Chst10 (ENSMSIG00000022069) Nms (ENSMSIG00000022133) Pdcl3 (ENSMSIG00000022157) ENSMSIG00000022177 Npas2 (ENSMSIG00000022192) Rpl31 (ENSMSIG00000022245) Tbc1d8 (ENSMSIG00000022280) Cnot11 (ENSMSIG00000022348) #18 Rnf149 (ENSMSIG00000022375) #19 Creg2 (ENSMSIG00000022406) #20 Rfx8 (ENSMSIG00000022417) #21 ENSMSIG00000022440 Map4k4 (ENSMSIG00000022455) #22 Il1r2 (ENSMSIG00000025031) #23 Il1r1 (ENSMSIG00000025043) #24 Il1rl2 (ENSMSIG00000025067) #25 ENSMSIG00000025093 Il1rl1 (ENSMSIG00000025096) #26 Il18r1 (ENSMSIG00000025150) #27 Il18rap (ENSMSIG00000025343) #28 Slc9a4 (ENSMSIG00000025357) #29 Slc9a2 (ENSMSIG00000025415) #30 Mfsd9 (ENSMSIG00000025439) #31 Tmem182 (ENSMSIG00000025450) #32 ENSMSIG00000025470 ENSMSIG00000025480 Mrps9 (ENSMSIG00000025504) #33 Gpr45 (ENSMSIG00000025534) #34 spretus MODERN SPECIES Eif5b (MGP_SPRETEiJ_G0014865) Rev1 (MGP_SPRETEiJ_G0014866) Aff3 (MGP_SPRETEiJ_G0014867) Lonrf2 (MGP_SPRETEiJ_G0014868) Chst10 (MGP_SPRETEiJ_G0014869) Nms (MGP_SPRETEiJ_G0014870) Pdcl3 (MGP_SPRETEiJ_G0014871) Npas2 (MGP_SPRETEiJ_G0014872) Rpl31 (MGP_SPRETEiJ_G0014873) Tbc1d8 (MGP_SPRETEiJ_G0014874) Cnot11 (MGP_SPRETEiJ_G0014875) #18 Rnf149 (MGP_SPRETEiJ_G0014876) #19 Creg2 (MGP_SPRETEiJ_G0014877) #20 Rfx8 (MGP_SPRETEiJ_G0014878) #21 MGP_SPRETEiJ_G0014879 Map4k4 (MGP_SPRETEiJ_G0014880) #22 MGP_SPRETEiJ_G0014881 #23 Il1r1 (MGP_SPRETEiJ_G0014882) #24 Il1rl2 (MGP_SPRETEiJ_G0014883) #25 Il1rl1 (MGP_SPRETEiJ_G0014884) #26 Il18r1 (MGP_SPRETEiJ_G0014885) #27 Il18rap (MGP_SPRETEiJ_G0014886) #28 Slc9a4 (MGP_SPRETEiJ_G0014887) #29 Slc9a2 (MGP_SPRETEiJ_G0014888) #30 Mfsd9 (MGP_SPRETEiJ_G0014889) #31 Tmem182 (MGP_SPRETEiJ_G0014890) #32 Pou3f3 (MGP_SPRETEiJ_G0014891) Mrps9 (MGP_SPRETEiJ_G0014892) #33 Gpr45 (MGP_SPRETEiJ_G0014893) #34 Tgfbrap1 (MGP_SPRETEiJ_G0014894) #35 AI597479 (MGP_SPRETEiJ_G0014895) #36 Mouse MODERN SPECIES Txndc9 (ENSMUSG00000058407) Eif5b (ENSMUSG00000026083) Rev1 (ENSMUSG00000026082) Aff3 (ENSMUSG00000037138) Lonrf2 (ENSMUSG00000048814) Chst10 (ENSMUSG00000026080) Nms (ENSMUSG00000067604) Pdcl3 (ENSMUSG00000026078) Npas2 (ENSMUSG00000026077) Rpl31 (ENSMUSG00000073702) Tbc1d8 (ENSMUSG00000003134) Cnot11 (ENSMUSG00000003135) #18 Rnf149 (ENSMUSG00000048234) #19 Creg2 (ENSMUSG00000050967) #20 Rfx8 (ENSMUSG00000057173) #21 Map4k4 (ENSMUSG00000026074) #22 Il1r2 (ENSMUSG00000026073) #23 Il1r1 (ENSMUSG00000026072) #24 Il1rl2 (ENSMUSG00000070942) #25 Il1rl1 (ENSMUSG00000026069) #26 Il18r1 (ENSMUSG00000026070) #27 Il18rap (ENSMUSG00000026068) #28 Slc9a4 (ENSMUSG00000026065) #29 Slc9a2 (ENSMUSG00000026062) #30 Mfsd9 (ENSMUSG00000041945) #31 Tmem182 (ENSMUSG00000079588) #32 Pou3f3 (ENSMUSG00000045515) Mrps9 (ENSMUSG00000060679) #33 Gpr45 (ENSMUSG00000041907) #34 Tgfbrap1 (ENSMUSG00000070939) #35 AI597479 (ENSMUSG00000010290) #36 Ryukyu mouse MODERN SPECIES Eif5b (MGP_CAROLIEiJ_G0014061) Rev1 (MGP_CAROLIEiJ_G0014062) Aff3 (MGP_CAROLIEiJ_G0014063) MGP_CAROLIEiJ_G0014064 MGP_CAROLIEiJ_G0014065 Nms (MGP_CAROLIEiJ_G0014066) Pdcl3 (MGP_CAROLIEiJ_G0014067) Npas2 (MGP_CAROLIEiJ_G0014068) Rpl31 (MGP_CAROLIEiJ_G0014069) Tbc1d8 (MGP_CAROLIEiJ_G0014070) Cnot11 (MGP_CAROLIEiJ_G0014071) #18 Rnf149 (MGP_CAROLIEiJ_G0014072) #19 Creg2 (MGP_CAROLIEiJ_G0014073) #20 Rfx8 (MGP_CAROLIEiJ_G0014074) #21 MGP_CAROLIEiJ_G0014075 Map4k4 (MGP_CAROLIEiJ_G0014076) #22 Il1r2 (MGP_CAROLIEiJ_G0014077) #23 Il1r1 (MGP_CAROLIEiJ_G0014078) #24 Il1rl2 (MGP_CAROLIEiJ_G0014079) #25 Il1rl1 (MGP_CAROLIEiJ_G0014080) #26 Il18r1 (MGP_CAROLIEiJ_G0014081) #27 Il18rap (MGP_CAROLIEiJ_G0014082) #28 Slc9a4 (MGP_CAROLIEiJ_G0014083) #29 Slc9a2 (MGP_CAROLIEiJ_G0014084) #30 Mfsd9 (MGP_CAROLIEiJ_G0014085) #31 Tmem182 (MGP_CAROLIEiJ_G0014086) #32 Pou3f3 (MGP_CAROLIEiJ_G0014087) Mrps9 (MGP_CAROLIEiJ_G0014088) #33 Gpr45 (MGP_CAROLIEiJ_G0014089) #34 Tgfbrap1 (MGP_CAROLIEiJ_G0014090) #35 AI597479 (MGP_CAROLIEiJ_G0014091) #36 Shrew mouse MODERN SPECIES 18 Lyg1 (MGP_PahariEiJ_G0027306) Txndc9 (MGP_PahariEiJ_G0027307) Eif5b (MGP_PahariEiJ_G0027308) Rev1 (MGP_PahariEiJ_G0027309) Aff3 (MGP_PahariEiJ_G0027310) Lonrf2 (MGP_PahariEiJ_G0027311) Chst10 (MGP_PahariEiJ_G0027312) Nms (MGP_PahariEiJ_G0027313) Pdcl3 (MGP_PahariEiJ_G0027314) Npas2 (MGP_PahariEiJ_G0027315) MGP_PahariEiJ_G0027316 Tbc1d8 (MGP_PahariEiJ_G0027317) Cnot11 (MGP_PahariEiJ_G0027318) #18 Rnf149 (MGP_PahariEiJ_G0027319) #19 MGP_PahariEiJ_G0027320 Map4k4 (MGP_PahariEiJ_G0027321) #22 Il1r2 (MGP_PahariEiJ_G0027322) #23 Il1r1 (MGP_PahariEiJ_G0027323) #24 MGP_PahariEiJ_G0027324 ##23 Il1rl1 (MGP_PahariEiJ_G0027325) #26 Il18r1 (MGP_PahariEiJ_G0027326) #27 Il18rap (MGP_PahariEiJ_G0027327) #28 Slc9a4 (MGP_PahariEiJ_G0027328) #29 Slc9a2 (MGP_PahariEiJ_G0027329) #30 Mfsd9 (MGP_PahariEiJ_G0027330) #31 Tmem182 (MGP_PahariEiJ_G0027331) #32 Pou3f3 (MGP_PahariEiJ_G0027332) Mrps9 (MGP_PahariEiJ_G0027333) #33 Gpr45 (MGP_PahariEiJ_G0027334) #34 Tgfbrap1 (MGP_PahariEiJ_G0027335) #35 AI597479 (MGP_PahariEiJ_G0027336) #36 Rat MODERN SPECIES 19 Rev1 (ENSRNOG00000018623) Aff3 (ENSRNOG00000018830) Lonrf2 (ENSRNOG00000023312) Chst10 (ENSRNOG00000012815) NMS (ENSRNOG00000038979) Pdcl3 (ENSRNOG00000013286) AABR07067441.3 (ENSRNOG00000052328) Npas2 (ENSRNOG00000013408) Rpl31 (ENSRNOG00000013508) Tbc1d8 (ENSRNOG00000013583) Cnot11 (ENSRNOG00000023220) #18 Rnf149 (ENSRNOG00000013946) #19 Creg2 (ENSRNOG00000013991) #20 Rfx8 (ENSRNOG00000058243) #21 ENSRNOG00000068018 Map4k4 (ENSRNOG00000014013) #22 Il1r2 (ENSRNOG00000014378) #23 RGD1564447 (ENSRNOG00000032108) Il1r1 (ENSRNOG00000014504) #24 Il1rl2 (ENSRNOG00000014683) #25 AABR07067459.1 (ENSRNOG00000061227) Il1rl1 (ENSRNOG00000014835) #26 Il18r1 (ENSRNOG00000015027) #27 Il18rap (ENSRNOG00000054218) #28 Slc9a4 (ENSRNOG00000015306) #29 Slc9a2 (ENSRNOG00000015567) #30 Mfsd9 (ENSRNOG00000023129) #31 Tmem182 (ENSRNOG00000028945) #32 Pou3f3 (ENSRNOG00000038909) Mrps9 (ENSRNOG00000016201) #33 Arpc5l-ps1 (ENSRNOG00000067388) Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1735 ENSNGAG00000020818 #22 Sp5 (ENSNGAG00000021968) ENSNGAG00000016065 Gad1 (ENSNGAG00000001182) Gorasp2 (ENSNGAG00000022582) ENSNGAG00000002431 ENSNGAG00000023622 Mettl8 (ENSNGAG00000023053) Dcaf17 (ENSNGAG00000018502) Cybrd1 (ENSNGAG00000022040) Dync1i2 (ENSNGAG00000022933) Slc25a12 (ENSNGAG00000013005) Hat1 (ENSNGAG00000019860) ENSNGAG00000004663 Dlx1 (ENSNGAG00000022526) Dlx2 (ENSNGAG00000022793) Upper Galilee mountains blind mole rat MODERN SPECIES 1304 ENSNGAG00000004780 ENSNGAG00000016613 Aff3 (ENSNGAG00000002408) Lonrf2 (ENSNGAG00000003807) Chst10 (ENSNGAG00000010913) Nms (ENSNGAG00000012529) Pdcl3 (ENSNGAG00000015075) ENSNGAG00000016958 ENSNGAG00000017295 ENSNGAG00000000892 Tbc1d8 (ENSNGAG00000005697) Cnot11 (ENSNGAG00000014276) #18 Rnf149 (ENSNGAG00000020073) #19 Creg2 (ENSNGAG00000020471) #20 Rfx8 (ENSNGAG00000000946) #21 Map4k4 (ENSNGAG00000002387) #22 Il1r2 (ENSNGAG00000013185) #23 Il1r1 (ENSNGAG00000014404) #24 Il1rl2 (ENSNGAG00000018938) #25 Il1rl1 (ENSNGAG00000020691) #26 Il18r1 (ENSNGAG00000020204) #27 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 72 ENSJJAG00000022119 ENSJJAG00000004790 ENSJJAG00000014995 Gypc (ENSJJAG00000021602) ENSJJAG00000012725 ENSJJAG00000018286 Otud1 (ENSJJAG00000001123) ENSJJAG00000018392 ENSJJAG00000010796 Etl4 (ENSJJAG00000019527) Arhgap21 (ENSJJAG00000011661) ENSJJAG00000018530 Enkur (ENSJJAG00000017061) ENSJJAG00000020324 Gpr158 (ENSJJAG00000002089) ENSJJAG00000020027 #22 ENSJJAG00000018582 Gad2 (ENSJJAG00000018593) Apbb1ip (ENSJJAG00000012590) Pdss1 (ENSJJAG00000020874) Abi1 (ENSJJAG00000019793) Mastl (ENSJJAG00000017405) Yme1l1 (ENSJJAG00000021372) Pard3 (ENSJJAG00000017258) Nrp1 (ENSJJAG00000022173) ENSJJAG00000013022 ENSJJAG00000006058 ENSJJAG00000023843 ENSJJAG00000018667 Lesser Egyptian jerboa MODERN SPECIES 46 ENSJJAG00000017349 Bcl2l11 (ENSJJAG00000021109) ENSJJAG00000006427 Mertk (ENSJJAG00000013479) Tmem87b (ENSJJAG00000024136) Fbln7 (ENSJJAG00000013091) Chst10 (ENSJJAG00000010292) Nms (ENSJJAG00000004537) ENSJJAG00000010749 ENSJJAG00000015742 Rpl31 (ENSJJAG00000012790) Tbc1d8 (ENSJJAG00000017814) Cnot11 (ENSJJAG00000017976) #18 Rnf149 (ENSJJAG00000007564) #19 Creg2 (ENSJJAG00000016924) #20 Map4k4 (ENSJJAG00000013973) #22 ENSJJAG00000022692 ENSJJAG00000019399 Il1r2 (ENSJJAG00000013732) #23 Il1r1 (ENSJJAG00000011570) #24 Il1rl2 (ENSJJAG00000023541) #25 Il1rl1 (ENSJJAG00000011833) #26 Il18r1 (ENSJJAG00000019528) #27 Slc9a4 (ENSJJAG00000016032) #29 Slc9a2 (ENSJJAG00000014175) #30 Mfsd9 (ENSJJAG00000016903) #31 Tmem182 (ENSJJAG00000012535) #32 ENSJJAG00000021686 ENSJJAG00000001151 #33 Gpr45 (ENSJJAG00000010952) #34 ENSJJAG00000014937 #35 Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 343 Commd3 (ENSDORG00000027082) Bmi1 (ENSDORG00000027813) ENSDORG00000005587 Pip4k2a (ENSDORG00000002100) Armc3 (ENSDORG00000000892) Msrb2 (ENSDORG00000007658) Ptf1a (ENSDORG00000026200) Otud1 (ENSDORG00000025924) Etl4 (ENSDORG00000011137) Arhgap21 (ENSDORG00000006139) ENSDORG00000000872 Enkur (ENSDORG00000015534) Thnsl1 (ENSDORG00000028470) ENSDORG00000024997 Gpr158 (ENSDORG00000000417) ENSDORG00000028759 #22 ENSDORG00000028584 Gad2 (ENSDORG00000004189) Apbb1ip (ENSDORG00000009613) Pdss1 (ENSDORG00000004641) Abi1 (ENSDORG00000004644) Acbd5 (ENSDORG00000011034) ENSDORG00000006106 Mastl (ENSDORG00000023472) Yme1l1 (ENSDORG00000007653) ENSDORG00000025588 ENSDORG00000030026 Kif5b (ENSDORG00000009869) Arhgap12 (ENSDORG00000000084) Zeb1 (ENSDORG00000007230) Zfp438 (ENSDORG00000000914) Kangaroo rat MODERN SPECIES 366 Txndc9 (ENSDORG00000013557) ENSDORG00000027717 Rev1 (ENSDORG00000013563) Aff3 (ENSDORG00000007294) Lonrf2 (ENSDORG00000014508) Chst10 (ENSDORG00000014722) Pdcl3 (ENSDORG00000012397) ENSDORG00000027399 ENSDORG00000029805 ENSDORG00000015728 Tbc1d8 (ENSDORG00000015729) Cnot11 (ENSDORG00000004481) #18 Rnf149 (ENSDORG00000007032) #19 Creg2 (ENSDORG00000026419) #20 Rfx8 (ENSDORG00000027680) #21 Map4k4 (ENSDORG00000011322) #22 Il1r2 (ENSDORG00000001386) #23 Il1r1 (ENSDORG00000008123) #24 Il1rl2 (ENSDORG00000008125) #25 Il1rl1 (ENSDORG00000000310) #26 Il18r1 (ENSDORG00000009793) #27 Il18rap (ENSDORG00000009798) #28 Slc9a4 (ENSDORG00000009801) #29 Slc9a2 (ENSDORG00000007378) #30 Mfsd9 (ENSDORG00000007380) #31 Tmem182 (ENSDORG00000001502) #32 Agtr2 (ENSDORG00000029423) Slc6a14 (ENSDORG00000026053) Klhl13 (ENSDORG00000008906) Wdr44 (ENSDORG00000006076) Dock11 (ENSDORG00000012146) Lagomorpha ANCESTRAL SPECIES 31 ENSGT00390000010868 ENSGT00390000016769 ENSGT00390000017614.i ENSGT00390000017614.j ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Rabbit MODERN SPECIES 11 ENSOCUG00000016129 ENSOCUG00000037238 EIF5B (ENSOCUG00000021154) REV1 (ENSOCUG00000014576) ENSOCUG00000035054 AFF3 (ENSOCUG00000009532) NMS (ENSOCUG00000001463) CHST10 (ENSOCUG00000012868) PDCL3 (ENSOCUG00000001469) NPAS2 (ENSOCUG00000002384) ENSOCUG00000002392 TBC1D8 (ENSOCUG00000002398) ENSOCUG00000013058 #19 ENSOCUG00000004448 #18 RFX8 (ENSOCUG00000017895) #21 MAP4K4 (ENSOCUG00000008180) #22 IL1R2 (ENSOCUG00000016746) #23 IL1R1 (ENSOCUG00000006957) #24 IL1RL2 (ENSOCUG00000029557) #25 IL1RL1 (ENSOCUG00000016462) #26 IL18R1 (ENSOCUG00000016476) #27 IL18RAP (ENSOCUG00000006067) #28 SLC9A4 (ENSOCUG00000006075) #29 SLC9A2 (ENSOCUG00000004890) #30 MFSD9 (ENSOCUG00000017011) #31 TMEM182 (ENSOCUG00000017004) #32 POU3F3 (ENSOCUG00000010933) MRPS9 (ENSOCUG00000015017) #33 TGFBRAP1 (ENSOCUG00000015024) #35 C2orf49 (ENSOCUG00000007963) #36 FHL2 (ENSOCUG00000007967) #37 Pika MODERN SPECIES 2520 CNOT11 (ENSOPRG00000009923) #18 ENSOPRG00000009939 #19 CREG2 (ENSOPRG00000009953) #20 ENSOPRG00000009966 MAP4K4 (ENSOPRG00000009971) #22 Tree shrew MODERN SPECIES 3557 MAP4K4 (ENSTBEG00000012991) #22 Primates ANCESTRAL SPECIES 14 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Strepsirrhini ANCESTRAL SPECIES 31 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Lemuriformes ANCESTRAL SPECIES 67 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Lemuriformes_a ANCESTRAL SPECIES 120 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Coquerels sifaka MODERN SPECIES 239 AFF3 (ENSPCOG00000016986) ENSPCOG00000018157 LONRF2 (ENSPCOG00000018384) PDCL3 (ENSPCOG00000003954) NMS (ENSPCOG00000028498) ENSPCOG00000023177 CHST10 (ENSPCOG00000027742) NPAS2 (ENSPCOG00000000049) ENSPCOG00000024743 ENSPCOG00000020653 TBC1D8 (ENSPCOG00000009380) CNOT11 (ENSPCOG00000022088) #18 RNF149 (ENSPCOG00000028249) #19 CREG2 (ENSPCOG00000023419) #20 RFX8 (ENSPCOG00000022314) #21 MAP4K4 (ENSPCOG00000028151) #22 IL1R2 (ENSPCOG00000014947) #23 IL1R1 (ENSPCOG00000005325) #24 IL1RL2 (ENSPCOG00000028343) #25 ENSPCOG00000027167 #26 IL18R1 (ENSPCOG00000028294) #27 IL18RAP (ENSPCOG00000012338) #28 SLC9A4 (ENSPCOG00000021248) #29 SLC9A2 (ENSPCOG00000026413) #30 MFSD9 (ENSPCOG00000023969) #31 TMEM182 (ENSPCOG00000025137) #32 Greater bamboo lemur MODERN SPECIES 219 RNF149 (ENSPSMG00000019224) #19 CNOT11 (ENSPSMG00000019228) #18 TBC1D8 (ENSPSMG00000019245) ENSPSMG00000019253 NPAS2 (ENSPSMG00000019292) CREG2 (ENSPSMG00000019322) #20 RFX8 (ENSPSMG00000019345) #21 ENSPSMG00000019353 MAP4K4 (ENSPSMG00000020613) #22 ENSPSMG00000021369 IL1R2 (ENSPSMG00000021380) #23 ENSPSMG00000021388 IL1R1 (ENSPSMG00000021470) #24 IL1RL2 (ENSPSMG00000021495) #25 ENSPSMG00000021498 #26 IL18R1 (ENSPSMG00000021512) #27 IL18RAP (ENSPSMG00000021526) #28 SLC9A4 (ENSPSMG00000021533) #29 SLC9A2 (ENSPSMG00000021553) #30 MFSD9 (ENSPSMG00000021569) #31 TMEM182 (ENSPSMG00000021578) #32 TSPYL6 (ENSPSMG00000021607) POU3F3 (ENSPSMG00000021610) MRPS9 (ENSPSMG00000021628) #33 Mouse lemur MODERN SPECIES 26 ENSMICG00000015951 EIF5B (ENSMICG00000015960) REV1 (ENSMICG00000015977) AFF3 (ENSMICG00000016001) LONRF2 (ENSMICG00000000058) ENSMICG00000000657 NMS (ENSMICG00000000057) CHST10 (ENSMICG00000028158) NPAS2 (ENSMICG00000016027) ENSMICG00000016059 TBC1D8 (ENSMICG00000046616) CNOT11 (ENSMICG00000002973) #18 RNF149 (ENSMICG00000034230) #19 CREG2 (ENSMICG00000037594) #20 RFX8 (ENSMICG00000035914) #21 MAP4K4 (ENSMICG00000003905) #22 IL1R2 (ENSMICG00000003917) #23 IL1R1 (ENSMICG00000047136) #24 IL1RL2 (ENSMICG00000043351) #25 IL1RL1 (ENSMICG00000008768) #26 IL18R1 (ENSMICG00000008776) #27 IL18RAP (ENSMICG00000047921) #28 SLC9A4 (ENSMICG00000039809) #29 SLC9A2 (ENSMICG00000008821) #30 MFSD9 (ENSMICG00000037979) #31 TMEM182 (ENSMICG00000008841) #32 POU3F3 (ENSMICG00000001214) MRPS9 (ENSMICG00000000223) #33 TGFBRAP1 (ENSMICG00000000226) #35 C2orf49 (ENSMICG00000000227) #36 FHL2 (ENSMICG00000000229) #37 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 302 BBS5 (ENSOGAG00000003717) FASTKD1 (ENSOGAG00000003722) PPIG (ENSOGAG00000029611) CFAP210 (ENSOGAG00000024516) PHOSPHO2 (ENSOGAG00000029657) KLHL23 (ENSOGAG00000003732) SSB (ENSOGAG00000029768) METTL5 (ENSOGAG00000010084) UBR3 (ENSOGAG00000028122) ENSOGAG00000032878 #22 ENSOGAG00000024121 MYO3B (ENSOGAG00000016592) ENSOGAG00000016611 GAD1 (ENSOGAG00000016613) GORASP2 (ENSOGAG00000016621) TLK1 (ENSOGAG00000016628) ENSOGAG00000027267 METTL8 (ENSOGAG00000010921) ENSOGAG00000010922 ENSOGAG00000027127 CYBRD1 (ENSOGAG00000000245) DYNC1I2 (ENSOGAG00000000379) SLC25A12 (ENSOGAG00000007381) HAT1 (ENSOGAG00000010423) METAP1D (ENSOGAG00000003048) Bushbaby MODERN SPECIES 194 REV1 (ENSOGAG00000013247) AFF3 (ENSOGAG00000013262) LONRF2 (ENSOGAG00000003794) ENSOGAG00000027230 CHST10 (ENSOGAG00000008178) NMS (ENSOGAG00000015135) PDCL3 (ENSOGAG00000015138) ENSOGAG00000026729 NPAS2 (ENSOGAG00000014490) ENSOGAG00000014494 TBC1D8 (ENSOGAG00000014498) CNOT11 (ENSOGAG00000014506) #18 RNF149 (ENSOGAG00000034221) #19 CREG2 (ENSOGAG00000003495) #20 RFX8 (ENSOGAG00000033445) #21 MAP4K4 (ENSOGAG00000012488) #22 IL1R2 (ENSOGAG00000012491) #23 IL1R1 (ENSOGAG00000008049) #24 IL1RL2 (ENSOGAG00000008050) #25 IL1RL1 (ENSOGAG00000025560) #26 IL18R1 (ENSOGAG00000013996) #27 IL18RAP (ENSOGAG00000014003) #28 SLC9A4 (ENSOGAG00000014009) #29 SLC9A2 (ENSOGAG00000015448) #30 MFSD9 (ENSOGAG00000015453) #31 TMEM182 (ENSOGAG00000015455) #32 ENSOGAG00000028858 POU3F3 (ENSOGAG00000028714) ENSOGAG00000025692 MRPS9 (ENSOGAG00000007255) #33 ENSOGAG00000033950 Haplorrhini ANCESTRAL SPECIES 37 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Tarsier DUPLICATION Tarsier MODERN SPECIES 6466 ENSTSYG00000027366 #22 Tarsier MODERN SPECIES 3872 SMAD4 (ENSTSYG00000009792) ELAC1 (ENSTSYG00000005985) MAP4K4 (ENSTSYG00000005595) #22 Simiiformes ANCESTRAL SPECIES 14 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295.y.b ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Platyrrhini ANCESTRAL SPECIES 13 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295.y.a.a.a.b ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT00940000155009.k.a.b ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204.k #33 ENSGT00950000183001.a.b.b #34 Mas night monkey MODERN SPECIES 965 MAP4K4 (ENSANAG00000029019) #22 IL1R2 (ENSANAG00000026683) #23 IL1R1 (ENSANAG00000025197) #24 IL1RL2 (ENSANAG00000033128) #25 IL1RL1 (ENSANAG00000031316) #26 ENSANAG00000022666 IL18R1 (ENSANAG00000006111) #27 IL18RAP (ENSANAG00000031820) #28 SLC9A4 (ENSANAG00000035161) #29 SLC9A2 (ENSANAG00000028201) #30 MFSD9 (ENSANAG00000026384) #31 TMEM182 (ENSANAG00000025324) #32 POU3F3 (ENSANAG00000030311) ENSANAG00000032107 ENSANAG00000021821 #33 GPR45 (ENSANAG00000011996) #34 Cebidae ANCESTRAL SPECIES 15 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295.y.a.a.a.b ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT00940000155009.k.a.b ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204.k #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Marmoset MODERN SPECIES 5 ENSCJAG00000010160 NPAS2 (ENSCJAG00000021202) ENSCJAG00000021214 TBC1D8 (ENSCJAG00000021215) ENSCJAG00000074572 ENSCJAG00000070276 ENSCJAG00000074398 ENSCJAG00000075433 ENSCJAG00000042067 CNOT11 (ENSCJAG00000021229) #18 RNF149 (ENSCJAG00000021239) #19 CREG2 (ENSCJAG00000065818) #20 ENSCJAG00000045393 ENSCJAG00000056655 ENSCJAG00000072007 MAP4K4 (ENSCJAG00000008424) #22 IL1R2 (ENSCJAG00000008399) #23 IL1R1 (ENSCJAG00000008354) #24 IL1RL2 (ENSCJAG00000008327) #25 ENSCJAG00000022737 IL1RL1 (ENSCJAG00000008308) #26 IL18R1 (ENSCJAG00000008271) #27 IL18RAP (ENSCJAG00000008255) #28 ENSCJAG00000085169 SLC9A4 (ENSCJAG00000008163) #29 SLC9A2 (ENSCJAG00000008193) #30 MFSD9 (ENSCJAG00000069979) #31 TMEM182 (ENSCJAG00000043937) #32 POU3F3 (ENSCJAG00000046410) ENSCJAG00000008156 #33 GPR45 (ENSCJAG00000022736) #34 Cebidae_a ANCESTRAL SPECIES 56 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295.y.a.a.a.b ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT00940000155009.k.a.b ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204.k #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Bolivian squirrel monkey MODERN SPECIES 137 NPAS2 (ENSSBOG00000032277) ENSSBOG00000022106 TBC1D8 (ENSSBOG00000027309) ENSSBOG00000031710 CNOT11 (ENSSBOG00000030189) #18 RNF149 (ENSSBOG00000030607) #19 CREG2 (ENSSBOG00000022650) #20 RFX8 (ENSSBOG00000019961) #21 MAP4K4 (ENSSBOG00000028082) #22 ENSSBOG00000026816 HSBP1 (ENSSBOG00000027265) CDH13 (ENSSBOG00000019920) ENSSBOG00000031580 HSD17B2 (ENSSBOG00000033511) SDR42E1 (ENSSBOG00000034896) PLCG2 (ENSSBOG00000026469) CMIP (ENSSBOG00000003467) GAN (ENSSBOG00000024113) BCO1 (ENSSBOG00000014568) ENSSBOG00000023334 ENSSBOG00000028280 C16orf46 (ENSSBOG00000029905) ENSSBOG00000020729 ENSSBOG00000023971 Capuchin MODERN SPECIES 202 ENSCCAG00000026041 CHST10 (ENSCCAG00000022449) NMS (ENSCCAG00000033337) ENSCCAG00000033398 NPAS2 (ENSCCAG00000031914) ENSCCAG00000032563 TBC1D8 (ENSCCAG00000034002) CNOT11 (ENSCCAG00000027582) #18 RNF149 (ENSCCAG00000032377) #19 CREG2 (ENSCCAG00000034118) #20 RFX8 (ENSCCAG00000029305) #21 ENSCCAG00000031258 MAP4K4 (ENSCCAG00000021331) #22 IL1R2 (ENSCCAG00000033665) #23 IL1R1 (ENSCCAG00000038037) #24 IL1RL2 (ENSCCAG00000023016) #25 ENSCCAG00000026403 IL1RL1 (ENSCCAG00000034801) #26 IL18R1 (ENSCCAG00000022289) #27 ENSCCAG00000030854 IL18RAP (ENSCCAG00000030449) #28 SLC9A4 (ENSCCAG00000020485) #29 SLC9A2 (ENSCCAG00000024071) #30 MFSD9 (ENSCCAG00000035445) #31 TMEM182 (ENSCCAG00000028079) #32 Catarrhini ANCESTRAL SPECIES 17 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000154639.n.b ENSGT00510000049213 ENSGT00940000154295.y.b ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.b.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Hominoidea ANCESTRAL SPECIES 30 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000154639.n.b ENSGT00510000049213 ENSGT00940000154295.y.b ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00950000183030.m.a.a.b.b.a.b.b.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00910000148121 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 Hominidae ANCESTRAL SPECIES 28 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000154639.n.b ENSGT00510000049213 ENSGT00940000154295.y.b ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00910000148121 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 Homo/Pan/Gorilla group ANCESTRAL SPECIES 29 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000154639.n.b ENSGT00510000049213 ENSGT00940000154295.y.b ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00910000148121 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 Gorilla MODERN SPECIES 14 REV1 (ENSGGOG00000001728) AFF3 (ENSGGOG00000034914) LONRF2 (ENSGGOG00000004914) CHST10 (ENSGGOG00000011750) ENSGGOG00000026122 NMS (ENSGGOG00000022806) ENSGGOG00000022048 PDCL3 (ENSGGOG00000036387) NPAS2 (ENSGGOG00000006420) RPL31 (ENSGGOG00000006432) TBC1D8 (ENSGGOG00000005459) CNOT11 (ENSGGOG00000005070) #18 RNF149 (ENSGGOG00000016958) #19 ENSGGOG00000041750 #20 RFX8 (ENSGGOG00000011918) #21 MAP4K4 (ENSGGOG00000010831) #22 IL1R2 (ENSGGOG00000011488) #23 IL1R1 (ENSGGOG00000003344) #24 IL1RL2 (ENSGGOG00000003351) #25 IL1RL1 (ENSGGOG00000016653) #26 IL18R1 (ENSGGOG00000012879) #27 IL18RAP (ENSGGOG00000005842) #28 SLC9A4 (ENSGGOG00000014583) #29 SLC9A2 (ENSGGOG00000016491) #30 MFSD9 (ENSGGOG00000037798) #31 TMEM182 (ENSGGOG00000037042) #32 ENSGGOG00000043897 MRPS9 (ENSGGOG00000007751) #33 GPR45 (ENSGGOG00000012122) #34 TGFBRAP1 (ENSGGOG00000008221) #35 C2orf49 (ENSGGOG00000023363) #36 Homo/Pan group ANCESTRAL SPECIES 14 ENSGT00390000015645.q ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295.y.b ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00910000148121 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 Pan ANCESTRAL SPECIES 33 ENSGT00390000015645.q ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295.y.b.e ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00910000148121 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000153469.a.b.h ENSGT00940000153299.c.a.a.a.b.d ENSGT00940000163665 ENSGT00900000143808 Bonobo MODERN SPECIES 14 REV1 (ENSPPAG00000031053) AFF3 (ENSPPAG00000032057) ENSPPAG00000039170 CHST10 (ENSPPAG00000039194) NMS (ENSPPAG00000037891) ENSPPAG00000028037 ENSPPAG00000039690 ENSPPAG00000028745 NPAS2 (ENSPPAG00000032228) ENSPPAG00000026810 TBC1D8 (ENSPPAG00000031495) CNOT11 (ENSPPAG00000033121) #18 ENSPPAG00000043974 #19 CREG2 (ENSPPAG00000044090) #20 RFX8 (ENSPPAG00000041329) #21 MAP4K4 (ENSPPAG00000036630) #22 IL1R2 (ENSPPAG00000028877) #23 ENSPPAG00000011663 IL1R1 (ENSPPAG00000039338) #24 IL1RL2 (ENSPPAG00000031254) #25 ENSPPAG00000036065 #27 IL18RAP (ENSPPAG00000029352) #28 SLC9A4 (ENSPPAG00000033960) #29 SLC9A2 (ENSPPAG00000035825) #30 MFSD9 (ENSPPAG00000038884) #31 TMEM182 (ENSPPAG00000038490) #32 ENSPPAG00000008281 ENSPPAG00000035137 MRPS9 (ENSPPAG00000037429) #33 ENSPPAG00000043229 GPR45 (ENSPPAG00000006372) #34 Chimpanzee MODERN SPECIES 14 EIF5B (ENSPTRG00000012279) REV1 (ENSPTRG00000012280) AFF3 (ENSPTRG00000012281) LONRF2 (ENSPTRG00000012282) CHST10 (ENSPTRG00000012284) NMS (ENSPTRG00000030401) ENSPTRG00000044029 ENSPTRG00000047153 NPAS2 (ENSPTRG00000012287) ENSPTRG00000050218 TBC1D8 (ENSPTRG00000030399) CNOT11 (ENSPTRG00000012290) #18 RNF149 (ENSPTRG00000012291) #19 CREG2 (ENSPTRG00000012292) #20 RFX8 (ENSPTRG00000012293) #21 MAP4K4 (ENSPTRG00000012294) #22 IL1R2 (ENSPTRG00000012297) #23 ENSPTRG00000050348 IL1R1 (ENSPTRG00000012299) #24 IL1RL2 (ENSPTRG00000012300) #25 ENSPTRG00000044716 #26 IL18R1 (ENSPTRG00000012302) #27 IL18RAP (ENSPTRG00000012303) #28 SLC9A4 (ENSPTRG00000012304) #29 SLC9A2 (ENSPTRG00000012305) #30 MFSD9 (ENSPTRG00000012307) #31 TMEM182 (ENSPTRG00000012308) #32 ENSPTRG00000046259 ENSPTRG00000052656 POU3F3 (ENSPTRG00000030398) ENSPTRG00000052249 Human MODERN SPECIES 11 TXNDC9 (ENSG00000115514) EIF5B (ENSG00000158417) REV1 (ENSG00000135945) AFF3 (ENSG00000144218) LONRF2 (ENSG00000170500) CHST10 (ENSG00000115526) NMS (ENSG00000204640) PDCL3 (ENSG00000115539) NPAS2 (ENSG00000170485) RPL31 (ENSG00000071082) TBC1D8 (ENSG00000204634) CNOT11 (ENSG00000158435) #18 RNF149 (ENSG00000163162) #19 CREG2 (ENSG00000175874) #20 RFX8 (ENSG00000196460) #21 MAP4K4 (ENSG00000071054) #22 IL1R2 (ENSG00000115590) #23 IL1R1 (ENSG00000115594) #24 IL1RL2 (ENSG00000115598) #25 IL1RL1 (ENSG00000115602) #26 IL18R1 (ENSG00000115604) #27 IL18RAP (ENSG00000115607) #28 SLC9A4 (ENSG00000180251) #29 SLC9A2 (ENSG00000115616) #30 MFSD9 (ENSG00000135953) #31 TMEM182 (ENSG00000170417) #32 POU3F3 (ENSG00000198914) MRPS9 (ENSG00000135972) #33 GPR45 (ENSG00000135973) #34 TGFBRAP1 (ENSG00000135966) #35 C2orf49 (ENSG00000135974) #36 Orangutan MODERN SPECIES 14 ENSPPYG00000035486 TXNDC9 (ENSPPYG00000036699) EIF5B (ENSPPYG00000012094) REV1 (ENSPPYG00000012095) AFF3 (ENSPPYG00000012096) LONRF2 (ENSPPYG00000012097) CHST10 (ENSPPYG00000012098) NMS (ENSPPYG00000012099) ENSPPYG00000006487 PDCL3 (ENSPPYG00000012100) NPAS2 (ENSPPYG00000012101) RPL31 (ENSPPYG00000025870) TBC1D8 (ENSPPYG00000012102) CNOT11 (ENSPPYG00000012103) #18 ENSPPYG00000012104 #19 MAP4K4 (ENSPPYG00000012107) #22 IL1R2 (ENSPPYG00000012108) #23 IL1R1 (ENSPPYG00000012109) #24 IL1RL2 (ENSPPYG00000012110) #25 IL1RL1 (ENSPPYG00000012111) #26 IL18R1 (ENSPPYG00000012112) #27 IL18RAP (ENSPPYG00000012113) #28 SLC9A4 (ENSPPYG00000012114) #29 SLC9A2 (ENSPPYG00000012115) #30 MFSD9 (ENSPPYG00000038484) #31 ENSPPYG00000034423 TMEM182 (ENSPPYG00000032935) #32 ENSPPYG00000039806 POU3F3 (ENSPPYG00000012118) MRPS9 (ENSPPYG00000012119) #33 GPR45 (ENSPPYG00000012120) #34 Gibbon MODERN SPECIES 4 REV1 (ENSNLEG00000014240) AFF3 (ENSNLEG00000014317) LONRF2 (ENSNLEG00000014343) CHST10 (ENSNLEG00000014368) ENSNLEG00000034460 NMS (ENSNLEG00000014380) ENSNLEG00000014393 NPAS2 (ENSNLEG00000014404) ENSNLEG00000028663 ENSNLEG00000014444 TBC1D8 (ENSNLEG00000014456) CNOT11 (ENSNLEG00000014472) #18 RNF149 (ENSNLEG00000014483) #19 ENSNLEG00000030602 RFX8 (ENSNLEG00000014506) #21 MAP4K4 (ENSNLEG00000014520) #22 IL1R2 (ENSNLEG00000014582) #23 ENSNLEG00000031543 IL1R1 (ENSNLEG00000014597) #24 IL1RL2 (ENSNLEG00000014624) #25 ENSNLEG00000014642 #26 IL18R1 (ENSNLEG00000014646) #27 IL18RAP (ENSNLEG00000014668) #28 SLC9A4 (ENSNLEG00000014687) #29 SLC9A2 (ENSNLEG00000014699) #30 MFSD9 (ENSNLEG00000014709) #31 TMEM182 (ENSNLEG00000014717) #32 ENSNLEG00000029090 MRPS9 (ENSNLEG00000032880) #33 GPR45 (ENSNLEG00000019198) #34 TGFBRAP1 (ENSNLEG00000010552) #35 Cercopithecidae ANCESTRAL SPECIES 32 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000154639.n.b ENSGT00510000049213 ENSGT00940000154295.y.b.a ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00960000186941 ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000154639.n.b ENSGT00510000049213 ENSGT00940000154295.y.b.a.b ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT00940000154172.gb.b.a.d ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 Cercopithecinae_a ANCESTRAL SPECIES 17 ENSGT00390000018085.a.a.b.f.b.b ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000154639.n.b ENSGT00510000049213 ENSGT00940000154295.y.b.a.b ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000154172.gb.b.a.d ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000153112.D.n.a.a.b.b ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 Macaca ANCESTRAL SPECIES 28 ENSGT00390000018085.a.a.b.f.b.b ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000154639.n.b ENSGT00510000049213 ENSGT00940000154295.y.b.a.b.c ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000154172.gb.b.a.d ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000153112.D.n.a.a.b.b ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Macaca_a ANCESTRAL SPECIES 15 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295.y.b.a.b.c ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00980000202165.D ENSGT00940000155063 #22 ENSGT00940000154172.gb.b.a.d ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Crab-eating macaque MODERN SPECIES 4 ENSMFAG00000030155 AFF3 (ENSMFAG00000031640) ENSMFAG00000057183 LONRF2 (ENSMFAG00000041273) CHST10 (ENSMFAG00000043113) NMS (ENSMFAG00000035510) ENSMFAG00000002115 NPAS2 (ENSMFAG00000001513) ENSMFAG00000044593 TBC1D8 (ENSMFAG00000004006) CNOT11 (ENSMFAG00000044449) #18 RNF149 (ENSMFAG00000038019) #19 CREG2 (ENSMFAG00000043737) #20 RFX8 (ENSMFAG00000034469) #21 ENSMFAG00000052713 MAP4K4 (ENSMFAG00000030642) #22 ENSMFAG00000015955 IL1R2 (ENSMFAG00000046196) #23 IL1R1 (ENSMFAG00000034258) #24 IL1RL2 (ENSMFAG00000046248) #25 IL1RL1 (ENSMFAG00000007059) #26 IL18R1 (ENSMFAG00000032671) #27 IL18RAP (ENSMFAG00000043038) #28 SLC9A4 (ENSMFAG00000044816) #29 SLC9A2 (ENSMFAG00000045336) #30 MFSD9 (ENSMFAG00000042016) #31 TMEM182 (ENSMFAG00000036897) #32 ENSMFAG00000060850 ENSMFAG00000057295 ENSMFAG00000048377 ENSMFAG00000055851 Rhesus MODERN SPECIES 4 LONRF2 (ENSMMUG00000017455) CHST10 (ENSMMUG00000021645) NMS (ENSMMUG00000030707) ENSMMUG00000040135 ENSMMUG00000056832 ENSMMUG00000063225 ENSMMUG00000052525 NPAS2 (ENSMMUG00000009871) RPL31 (ENSMMUG00000009873) TBC1D8 (ENSMMUG00000009874) CNOT11 (ENSMMUG00000001147) #18 RNF149 (ENSMMUG00000057257) #19 CREG2 (ENSMMUG00000017356) #20 RFX8 (ENSMMUG00000030702) #21 ENSMMUG00000059197 MAP4K4 (ENSMMUG00000010811) #22 IL1R2 (ENSMMUG00000020739) #23 IL1R1 (ENSMMUG00000020737) #24 IL1RL2 (ENSMMUG00000016533) #25 IL1RL1 (ENSMMUG00000009238) #26 IL18R1 (ENSMMUG00000009244) #27 IL18RAP (ENSMMUG00000009246) #28 SLC9A4 (ENSMMUG00000004164) #29 SLC9A2 (ENSMMUG00000004165) #30 MFSD9 (ENSMMUG00000043149) #31 TMEM182 (ENSMMUG00000004169) #32 ENSMMUG00000050800 ENSMMUG00000064102 ENSMMUG00000062978 MRPS9 (ENSMMUG00000019682) #33 TGFBRAP1 (ENSMMUG00000015789) #35 Pig-tailed macaque MODERN SPECIES 165 REV1 (ENSMNEG00000033432) ENSMNEG00000026095 AFF3 (ENSMNEG00000031770) LONRF2 (ENSMNEG00000039849) CHST10 (ENSMNEG00000043033) ENSMNEG00000036571 NMS (ENSMNEG00000038064) ENSMNEG00000035390 NPAS2 (ENSMNEG00000034450) ENSMNEG00000042370 TBC1D8 (ENSMNEG00000006766) CNOT11 (ENSMNEG00000044355) #18 RNF149 (ENSMNEG00000044718) #19 CREG2 (ENSMNEG00000032081) #20 RFX8 (ENSMNEG00000035104) #21 MAP4K4 (ENSMNEG00000033335) #22 ENSMNEG00000018515 IL1R2 (ENSMNEG00000035660) #23 IL1R1 (ENSMNEG00000029507) #24 IL1RL2 (ENSMNEG00000031150) #25 ENSMNEG00000033211 #26 IL18R1 (ENSMNEG00000042412) #27 IL18RAP (ENSMNEG00000037581) #28 SLC9A4 (ENSMNEG00000043901) #29 SLC9A2 (ENSMNEG00000044315) #30 MFSD9 (ENSMNEG00000029233) #31 TMEM182 (ENSMNEG00000000448) #32 ENSMNEG00000043182 ENSMNEG00000013615 MRPS9 (ENSMNEG00000034038) #33 GPR45 (ENSMNEG00000008661) #34 Cercopithecinae_b ANCESTRAL SPECIES 40 ENSGT00390000018085.a.a.b.f.b.b ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000154639.n.b ENSGT00510000049213 ENSGT00940000154295.y.b.a.b ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000154172.gb.b.a.d ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000153112.D.n.a.a.b.b ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 Olive baboon MODERN SPECIES 5 NMS (ENSPANG00000024717) ENSPANG00000049213 ENSPANG00000007110 NPAS2 (ENSPANG00000000546) ENSPANG00000031625 TBC1D8 (ENSPANG00000022369) ENSPANG00000050706 CNOT11 (ENSPANG00000023665) #18 RNF149 (ENSPANG00000024716) #19 CREG2 (ENSPANG00000008057) #20 RFX8 (ENSPANG00000008935) #21 ENSPANG00000019556 ENSPANG00000041623 ENSPANG00000046709 ENSPANG00000033346 MAP4K4 (ENSPANG00000016468) #22 IL1R2 (ENSPANG00000008628) #23 IL1R1 (ENSPANG00000008056) #24 IL1RL2 (ENSPANG00000016467) #25 IL1RL1 (ENSPANG00000008055) #26 IL18R1 (ENSPANG00000025952) #27 IL18RAP (ENSPANG00000007109) #28 SLC9A4 (ENSPANG00000019901) #29 SLC9A2 (ENSPANG00000024442) #30 MFSD9 (ENSPANG00000022366) #31 TMEM182 (ENSPANG00000040836) #32 ENSPANG00000051105 ENSPANG00000041304 POU3F3 (ENSPANG00000048187) MRPS9 (ENSPANG00000012691) #33 GPR45 (ENSPANG00000048238) #34 Cercopithecinae_d ANCESTRAL SPECIES 74 ENSGT00390000018085.a.a.b.f.b.b ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000154639.n.b ENSGT00510000049213 ENSGT00940000154295.y.b.a.b ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000154172.gb.b.a.d ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000153112.D.n.a.a.b.b ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 Sooty mangabey MODERN SPECIES 622 ENSCATG00000040341 AFF3 (ENSCATG00000045196) LONRF2 (ENSCATG00000030877) CHST10 (ENSCATG00000036687) ENSCATG00000045280 NMS (ENSCATG00000029654) ENSCATG00000030865 NPAS2 (ENSCATG00000031061) ENSCATG00000032919 TBC1D8 (ENSCATG00000040426) CNOT11 (ENSCATG00000040259) #18 RNF149 (ENSCATG00000032784) #19 CREG2 (ENSCATG00000042933) #20 RFX8 (ENSCATG00000034271) #21 ENSCATG00000014556 MAP4K4 (ENSCATG00000043377) #22 IL1R2 (ENSCATG00000045357) #23 IL1R1 (ENSCATG00000044046) #24 IL1RL2 (ENSCATG00000044212) #25 IL1RL1 (ENSCATG00000033298) #26 IL18R1 (ENSCATG00000032165) #27 IL18RAP (ENSCATG00000041182) #28 SLC9A4 (ENSCATG00000034216) #29 SLC9A2 (ENSCATG00000037196) #30 MFSD9 (ENSCATG00000031408) #31 TMEM182 (ENSCATG00000034912) #32 ENSCATG00000042784 POU3F3 (ENSCATG00000043149) ENSCATG00000005418 MRPS9 (ENSCATG00000036678) #33 TGFBRAP1 (ENSCATG00000031570) #35 Drill MODERN SPECIES 1637 EIF5B (ENSMLEG00000031596) REV1 (ENSMLEG00000037720) ENSMLEG00000015560 AFF3 (ENSMLEG00000041792) LONRF2 (ENSMLEG00000042790) CHST10 (ENSMLEG00000043847) ENSMLEG00000031002 NMS (ENSMLEG00000043331) ENSMLEG00000026784 NPAS2 (ENSMLEG00000029966) ENSMLEG00000037903 TBC1D8 (ENSMLEG00000031021) CNOT11 (ENSMLEG00000024913) #18 ENSMLEG00000043708 #19 RFX8 (ENSMLEG00000035011) #21 MAP4K4 (ENSMLEG00000042100) #22 IL1R2 (ENSMLEG00000041212) #23 IL1R1 (ENSMLEG00000032449) #24 IL1RL2 (ENSMLEG00000044151) #25 IL1RL1 (ENSMLEG00000025624) #26 IL18R1 (ENSMLEG00000028670) #27 IL18RAP (ENSMLEG00000032358) #28 SLC9A4 (ENSMLEG00000014766) #29 SLC9A2 (ENSMLEG00000042952) #30 MFSD9 (ENSMLEG00000009199) #31 TMEM182 (ENSMLEG00000039255) #32 ENSMLEG00000029682 ENSMLEG00000034061 ENSMLEG00000027413 MRPS9 (ENSMLEG00000042789) #33 GPR45 (ENSMLEG00000026836) #34 Vervet Monkey DUPLICATION Vervet Monkey MODERN SPECIES 28 BMI1 (ENSCSAG00000012472) SPAG6 (ENSCSAG00000012459) PIP4K2A (ENSCSAG00000012448) ARMC3 (ENSCSAG00000012440) MSRB2 (ENSCSAG00000012427) PTF1A (ENSCSAG00000012422) ENSCSAG00000012415 ENSCSAG00000012408 OTUD1 (ENSCSAG00000019058) KIAA1217 (ENSCSAG00000012397) ARHGAP21 (ENSCSAG00000012325) PRTFDC1 (ENSCSAG00000012165) ENKUR (ENSCSAG00000012159) THNSL1 (ENSCSAG00000019059) GPR158 (ENSCSAG00000012152) ENSCSAG00000012143 #22 GAD2 (ENSCSAG00000012130) APBB1IP (ENSCSAG00000012106) PDSS1 (ENSCSAG00000012067) ABI1 (ENSCSAG00000011992) ANKRD26 (ENSCSAG00000011974) YME1L1 (ENSCSAG00000011924) MASTL (ENSCSAG00000011793) ACBD5 (ENSCSAG00000011784) ENSCSAG00000011771 PTCHD3 (ENSCSAG00000011759) RAB18 (ENSCSAG00000011749) MKX (ENSCSAG00000011743) ODAD2 (ENSCSAG00000011739) MPP7 (ENSCSAG00000011728) ENSCSAG00000019060 Vervet Monkey MODERN SPECIES 5 LYG2 (ENSCSAG00000017216) LYG1 (ENSCSAG00000017213) TXNDC9 (ENSCSAG00000017212) EIF5B (ENSCSAG00000017209) REV1 (ENSCSAG00000017200) AFF3 (ENSCSAG00000017193) LONRF2 (ENSCSAG00000017190) CHST10 (ENSCSAG00000017188) ENSCSAG00000017183 NPAS2 (ENSCSAG00000017176) TBC1D8 (ENSCSAG00000017170) CNOT11 (ENSCSAG00000017167) #18 RNF149 (ENSCSAG00000017163) #19 CREG2 (ENSCSAG00000017159) #20 RFX8 (ENSCSAG00000017155) #21 MAP4K4 (ENSCSAG00000017152) #22 ENSCSAG00000019428 IL1R2 (ENSCSAG00000017148) #23 ENSCSAG00000017144 IL1R1 (ENSCSAG00000017139) #24 IL1RL2 (ENSCSAG00000017133) #25 IL1RL1 (ENSCSAG00000017123) #26 IL18R1 (ENSCSAG00000017115) #27 IL18RAP (ENSCSAG00000017102) #28 SLC9A4 (ENSCSAG00000017094) #29 SLC9A2 (ENSCSAG00000017090) #30 MFSD9 (ENSCSAG00000017085) #31 TMEM182 (ENSCSAG00000017082) #32 POU3F3 (ENSCSAG00000019429) MRPS9 (ENSCSAG00000017079) #33 GPR45 (ENSCSAG00000019430) #34 Rhinopithecus ANCESTRAL SPECIES 411 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 Black snub-nosed monkey MODERN SPECIES 2646 CREG2 (ENSRBIG00000032744) #20 RFX8 (ENSRBIG00000007111) #21 MAP4K4 (ENSRBIG00000044779) #22 IL1R2 (ENSRBIG00000042181) #23 IL1R1 (ENSRBIG00000028664) #24 IL1RL2 (ENSRBIG00000027663) #25 IL1RL1 (ENSRBIG00000038752) #26 IL18R1 (ENSRBIG00000043441) #27 IL18RAP (ENSRBIG00000031699) #28 SLC9A4 (ENSRBIG00000038959) #29 SLC9A2 (ENSRBIG00000040297) #30 MFSD9 (ENSRBIG00000033002) #31 ENSRBIG00000044903 TMEM182 (ENSRBIG00000010759) #32 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 2114 ENSRROG00000037881 #22 Golden snub-nosed monkey MODERN SPECIES 2565 CREG2 (ENSRROG00000039186) #20 RFX8 (ENSRROG00000039867) #21 MAP4K4 (ENSRROG00000033881) #22 IL1R2 (ENSRROG00000023010) #23 IL1R1 (ENSRROG00000030047) #24 IL1RL2 (ENSRROG00000042537) #25 Laurasiatheria ANCESTRAL SPECIES 13 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00980000202892 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155063 #22 Hedgehog MODERN SPECIES 6533 MAP4K4 (ENSEEUG00000007476) #22 Common shrew MODERN SPECIES 1195 ENSSARG00000004675 #22 Laurasiatheria_a ANCESTRAL SPECIES 17 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Laurasiatheria_b ANCESTRAL SPECIES 17 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Carnivora ANCESTRAL SPECIES 19 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00950000183375 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Felidae ANCESTRAL SPECIES 3 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00950000183375 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Panthera ANCESTRAL SPECIES 2 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00950000183375 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Tiger MODERN SPECIES 576 LYG1 (ENSPTIG00000021980) TXNDC9 (ENSPTIG00000021915) EIF5B (ENSPTIG00000021215) REV1 (ENSPTIG00000020411) AFF3 (ENSPTIG00000018781) LONRF2 (ENSPTIG00000018241) CHST10 (ENSPTIG00000017989) NMS (ENSPTIG00000017606) PDCL3 (ENSPTIG00000017144) NPAS2 (ENSPTIG00000015745) ENSPTIG00000013580 TBC1D8 (ENSPTIG00000009537) CNOT11 (ENSPTIG00000008532) #18 ENSPTIG00000007888 #19 RFX8 (ENSPTIG00000007179) #21 MAP4K4 (ENSPTIG00000016134) #22 IL1R2 (ENSPTIG00000014240) #23 IL1R1 (ENSPTIG00000011750) #24 IL1RL2 (ENSPTIG00000009750) #25 IL1RL1 (ENSPTIG00000007583) #26 IL18R1 (ENSPTIG00000007269) #27 IL18RAP (ENSPTIG00000022023) #28 SLC9A4 (ENSPTIG00000021921) #29 SLC9A2 (ENSPTIG00000021677) #30 MFSD9 (ENSPTIG00000021276) #31 TMEM182 (ENSPTIG00000020452) #32 MRPS9 (ENSPTIG00000019423) #33 GPR45 (ENSPTIG00000004452) #34 TGFBRAP1 (ENSPTIG00000017194) #35 C2orf49 (ENSPTIG00000016546) #36 FHL2 (ENSPTIG00000015836) #37 Panthera_a ANCESTRAL SPECIES 1 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00950000183375 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 leopard MODERN SPECIES 117 MAP4K4 (ENSPPRG00000007228) #22 IL1R2 (ENSPPRG00000007436) #23 ENSPPRG00000007448 IL1R1 (ENSPPRG00000008326) #24 IL1RL2 (ENSPPRG00000008587) #25 IL1RL1 (ENSPPRG00000008646) #26 IL18R1 (ENSPPRG00000008711) #27 IL18RAP (ENSPPRG00000009076) #28 SLC9A4 (ENSPPRG00000009096) #29 SLC9A2 (ENSPPRG00000009146) #30 MFSD9 (ENSPPRG00000009166) #31 TMEM182 (ENSPPRG00000009285) #32 POU3F3 (ENSPPRG00000009296) MRPS9 (ENSPPRG00000009311) #33 GPR45 (ENSPPRG00000010772) #34 TGFBRAP1 (ENSPPRG00000009423) #35 lion MODERN SPECIES 3 TXNDC9 (ENSPLOG00000013686) EIF5B (ENSPLOG00000013724) REV1 (ENSPLOG00000013773) AFF3 (ENSPLOG00000013918) LONRF2 (ENSPLOG00000014193) CHST10 (ENSPLOG00000014237) NMS (ENSPLOG00000014275) PDCL3 (ENSPLOG00000014385) NPAS2 (ENSPLOG00000014437) ENSPLOG00000014624 TBC1D8 (ENSPLOG00000014789) CNOT11 (ENSPLOG00000014835) #18 RNF149 (ENSPLOG00000014891) #19 CREG2 (ENSPLOG00000015020) #20 RFX8 (ENSPLOG00000015081) #21 MAP4K4 (ENSPLOG00000015662) #22 IL1R2 (ENSPLOG00000018067) #23 IL1R1 (ENSPLOG00000018144) #24 ENSPLOG00000018209 IL1RL2 (ENSPLOG00000018229) #25 IL1RL1 (ENSPLOG00000018320) #26 IL18R1 (ENSPLOG00000018547) #27 IL18RAP (ENSPLOG00000018648) #28 SLC9A4 (ENSPLOG00000018712) #29 SLC9A2 (ENSPLOG00000018822) #30 MFSD9 (ENSPLOG00000018911) #31 TMEM182 (ENSPLOG00000018944) #32 POU3F3 (ENSPLOG00000019026) MRPS9 (ENSPLOG00000019052) #33 GPR45 (ENSPLOG00000019146) #34 TGFBRAP1 (ENSPLOG00000019162) #35 Cat MODERN SPECIES 2 TXNDC9 (ENSFCAG00000013179) EIF5B (ENSFCAG00000009782) REV1 (ENSFCAG00000009785) AFF3 (ENSFCAG00000029975) LONRF2 (ENSFCAG00000022308) CHST10 (ENSFCAG00000023928) ENSFCAG00000042561 PDCL3 (ENSFCAG00000042131) NPAS2 (ENSFCAG00000005306) RPL31 (ENSFCAG00000026430) TBC1D8 (ENSFCAG00000018372) CNOT11 (ENSFCAG00000006924) #18 RNF149 (ENSFCAG00000041323) #19 CREG2 (ENSFCAG00000040690) #20 RFX8 (ENSFCAG00000027253) #21 MAP4K4 (ENSFCAG00000012149) #22 IL1R2 (ENSFCAG00000012150) #23 ENSFCAG00000034742 IL1R1 (ENSFCAG00000012152) #24 IL1RL2 (ENSFCAG00000030964) #25 IL1RL1 (ENSFCAG00000030791) #26 IL18R1 (ENSFCAG00000007750) #27 IL18RAP (ENSFCAG00000019058) #28 SLC9A4 (ENSFCAG00000018204) #29 SLC9A2 (ENSFCAG00000023377) #30 MFSD9 (ENSFCAG00000044885) #31 TMEM182 (ENSFCAG00000029731) #32 POU3F3 (ENSFCAG00000046112) MRPS9 (ENSFCAG00000031722) #33 ENSFCAG00000050474 GPR45 (ENSFCAG00000014875) #34 Caniformia ANCESTRAL SPECIES 18 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00950000183375 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Canidae ANCESTRAL SPECIES 10 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295.f ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT01100000263605.i.b ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00390000003427.q.a ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Red fox MODERN SPECIES 10 TXNDC9 (ENSVVUG00000028706) EIF5B (ENSVVUG00000028702) REV1 (ENSVVUG00000028698) AFF3 (ENSVVUG00000028696) LONRF2 (ENSVVUG00000028688) CHST10 (ENSVVUG00000028686) PDCL3 (ENSVVUG00000028679) NPAS2 (ENSVVUG00000028672) ENSVVUG00000028669 TBC1D8 (ENSVVUG00000028667) CNOT11 (ENSVVUG00000028664) #18 RNF149 (ENSVVUG00000028660) #19 CREG2 (ENSVVUG00000028654) #20 ENSVVUG00000028653 RFX8 (ENSVVUG00000028648) #21 MAP4K4 (ENSVVUG00000013589) #22 IL1R2 (ENSVVUG00000012859) #23 IL1R1 (ENSVVUG00000012786) #24 IL1RL2 (ENSVVUG00000012775) #25 IL1RL1 (ENSVVUG00000012760) #26 IL18R1 (ENSVVUG00000012740) #27 IL18RAP (ENSVVUG00000012711) #28 ENSVVUG00000012706 SLC9A4 (ENSVVUG00000012698) #29 SLC9A2 (ENSVVUG00000012609) #30 MFSD9 (ENSVVUG00000012601) #31 TMEM182 (ENSVVUG00000012600) #32 YPEL5 (ENSVVUG00000012570) ENSVVUG00000012534 MRPS9 (ENSVVUG00000012519) #33 GPR45 (ENSVVUG00000012504) #34 Canis_lupus ANCESTRAL SPECIES 9 ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000163657.e.a ENSGT00510000049213 ENSGT00940000154295.f ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT00540000070023.c.a.b ENSGT01050000244879.b.a.a #21 ENSGT01100000263605.i.b ENSGT00940000153112.D.h.a.b.a.b.a.a ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00390000003427.q.a ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Dog MODERN SPECIES 1 LONRF2 (ENSCAFG00845016364) CHST10 (ENSCAFG00845016252) ENSCAFG00845016217 NMS (ENSCAFG00845016126) PDCL3 (ENSCAFG00845016073) NPAS2 (ENSCAFG00845013162) RPL31 (ENSCAFG00845013103) TBC1D8 (ENSCAFG00845012925) CNOT11 (ENSCAFG00845012861) #18 RNF149 (ENSCAFG00845012717) #19 CREG2 (ENSCAFG00845012626) #20 ENSCAFG00845012600 ENSCAFG00845012573 ENSCAFG00845012544 RFX8 (ENSCAFG00845012474) #21 MAP4K4 (ENSCAFG00845011330) #22 IL1R2 (ENSCAFG00845010877) #23 IL1R1 (ENSCAFG00845010716) #24 IL1RL2 (ENSCAFG00845010648) #25 IL1RL1 (ENSCAFG00845010486) #27 IL18RAP (ENSCAFG00845010356) #28 ENSCAFG00845010335 SLC9A4 (ENSCAFG00845010292) #29 SLC9A2 (ENSCAFG00845010132) #30 MFSD9 (ENSCAFG00845010103) #31 TMEM182 (ENSCAFG00845010034) #32 ENSCAFG00845009997 POU3F3 (ENSCAFG00845009979) MRPS9 (ENSCAFG00845009846) #33 GPR45 (ENSCAFG00845009816) #34 TGFBRAP1 (ENSCAFG00845009768) #35 Dingo MODERN SPECIES 307 LONRF2 (ENSCAFG00020024592) CHST10 (ENSCAFG00020024588) ENSCAFG00020024586 PDCL3 (ENSCAFG00020024584) ENSCAFG00020024580 ENSCAFG00020024578 ENSCAFG00020024576 TBC1D8 (ENSCAFG00020024570) CNOT11 (ENSCAFG00020024562) #18 RNF149 (ENSCAFG00020024557) #19 CREG2 (ENSCAFG00020024556) #20 ENSCAFG00020024553 RFX8 (ENSCAFG00020024550) #21 ENSCAFG00020024546 ENSCAFG00020024544 MAP4K4 (ENSCAFG00020011352) #22 IL1R2 (ENSCAFG00020010692) #23 IL1R1 (ENSCAFG00020010642) #24 IL1RL2 (ENSCAFG00020010637) #25 IL1RL1 (ENSCAFG00020010606) #26 IL18R1 (ENSCAFG00020010597) #27 IL18RAP (ENSCAFG00020010569) #28 ENSCAFG00020010566 SLC9A4 (ENSCAFG00020010554) #29 SLC9A2 (ENSCAFG00020010536) #30 MFSD9 (ENSCAFG00020010533) #31 TMEM182 (ENSCAFG00020010526) #32 POU3F3 (ENSCAFG00020010510) MRPS9 (ENSCAFG00020010507) #33 GPR45 (ENSCAFG00020010496) #34 TGFBRAP1 (ENSCAFG00020010461) #35 Caniformia_b ANCESTRAL SPECIES 11 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00950000183375 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Mustelinae ANCESTRAL SPECIES 103 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 American mink MODERN SPECIES 297 LONRF2 (ENSNVIG00000020753) CHST10 (ENSNVIG00000020744) PDCL3 (ENSNVIG00000020724) NPAS2 (ENSNVIG00000020699) ENSNVIG00000020669 TBC1D8 (ENSNVIG00000020651) CNOT11 (ENSNVIG00000020632) #18 RNF149 (ENSNVIG00000020604) #19 CREG2 (ENSNVIG00000020592) #20 RFX8 (ENSNVIG00000020529) #21 MAP4K4 (ENSNVIG00000019570) #22 IL1R2 (ENSNVIG00000019502) #23 IL1R1 (ENSNVIG00000019450) #24 IL1RL2 (ENSNVIG00000019402) #25 IL1RL1 (ENSNVIG00000019363) #26 IL18R1 (ENSNVIG00000019312) #27 IL18RAP (ENSNVIG00000019282) #28 SLC9A4 (ENSNVIG00000019260) #29 Ferret MODERN SPECIES 199 EIF5B (ENSMPUG00000012068) REV1 (ENSMPUG00000012079) AFF3 (ENSMPUG00000012091) LONRF2 (ENSMPUG00000012102) CHST10 (ENSMPUG00000012105) ENSMPUG00000012108 NMS (ENSMPUG00000012109) PDCL3 (ENSMPUG00000012114) NPAS2 (ENSMPUG00000012117) ENSMPUG00000012197 TBC1D8 (ENSMPUG00000012202) CNOT11 (ENSMPUG00000012207) #18 RNF149 (ENSMPUG00000012210) #19 CREG2 (ENSMPUG00000012215) #20 RFX8 (ENSMPUG00000012220) #21 MAP4K4 (ENSMPUG00000012229) #22 IL1R2 (ENSMPUG00000012235) #23 IL1R1 (ENSMPUG00000012240) #24 IL1RL2 (ENSMPUG00000012246) #25 IL1RL1 (ENSMPUG00000012260) #26 IL18R1 (ENSMPUG00000012264) #27 IL18RAP (ENSMPUG00000012268) #28 Ursidae ANCESTRAL SPECIES 9 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b.h ENSGT00950000182974.a.a.a.b.g ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00950000183030.n ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00950000183375 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Giant Panda MODERN SPECIES 14 TXNDC9 (ENSAMEG00000013310) ENSAMEG00000013269 REV1 (ENSAMEG00000013212) AFF3 (ENSAMEG00000013204) LONRF2 (ENSAMEG00000015676) CHST10 (ENSAMEG00000015665) ENSAMEG00000030016 PDCL3 (ENSAMEG00000015651) NPAS2 (ENSAMEG00000027580) RPL31 (ENSAMEG00000015647) TBC1D8 (ENSAMEG00000015593) CNOT11 (ENSAMEG00000015585) #18 RNF149 (ENSAMEG00000015580) #19 CREG2 (ENSAMEG00000015573) #20 RFX8 (ENSAMEG00000015570) #21 MAP4K4 (ENSAMEG00000015519) #22 IL1R2 (ENSAMEG00000013088) #23 ENSAMEG00000026113 IL1R1 (ENSAMEG00000013113) #24 IL1RL2 (ENSAMEG00000013150) #25 IL1RL1 (ENSAMEG00000013160) #26 IL18RAP (ENSAMEG00000013197) #28 SLC9A4 (ENSAMEG00000013201) #29 SLC9A2 (ENSAMEG00000013210) #30 MFSD9 (ENSAMEG00000013239) #31 TMEM182 (ENSAMEG00000030392) #32 ENSAMEG00000013253 MRPS9 (ENSAMEG00000013254) #33 GPR45 (ENSAMEG00000020174) #34 C2orf49 (ENSAMEG00000013291) #36 TGFBRAP1 (ENSAMEG00000013278) #35 Ursus ANCESTRAL SPECIES 174 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00950000183375 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Polar bear MODERN SPECIES 217 RFX8 (ENSUMAG00000021968) #21 MAP4K4 (ENSUMAG00000021065) #22 IL1R2 (ENSUMAG00000020886) #23 ENSUMAG00000020881 IL1R1 (ENSUMAG00000020879) #24 IL1RL2 (ENSUMAG00000020867) #25 IL1RL1 (ENSUMAG00000020858) #26 IL18R1 (ENSUMAG00000020854) #27 IL18RAP (ENSUMAG00000020848) #28 SLC9A4 (ENSUMAG00000020834) #29 SLC9A2 (ENSUMAG00000020812) #30 TMEM182 (ENSUMAG00000020805) #32 MRPS9 (ENSUMAG00000020795) #33 TGFBRAP1 (ENSUMAG00000020783) #35 C2orf49 (ENSUMAG00000020770) #36 FHL2 (ENSUMAG00000020766) #37 NCK2 (ENSUMAG00000020756) American black bear DUPLICATION American black bear MODERN SPECIES 747 ENSUAMG00000026769 #22 American black bear MODERN SPECIES 746 MAP4K4 (ENSUAMG00000024855) #22 Laurasiatheria_c ANCESTRAL SPECIES 14 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Chiroptera ANCESTRAL SPECIES 47 ENSGT00390000017614.j ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Megabat MODERN SPECIES 2377 MAP4K4 (ENSPVAG00000006909) #22 Microchiroptera ANCESTRAL SPECIES 49 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Greater horseshoe bat MODERN SPECIES 4 MRPL30 (ENSRFEG00010021991) LYG1 (ENSRFEG00010021987) TXNDC9 (ENSRFEG00010021985) EIF5B (ENSRFEG00010021979) REV1 (ENSRFEG00010021974) AFF3 (ENSRFEG00010021968) CHST10 (ENSRFEG00010021958) PDCL3 (ENSRFEG00010021952) NPAS2 (ENSRFEG00010021944) ENSRFEG00010021934 TBC1D8 (ENSRFEG00010021926) CNOT11 (ENSRFEG00010021917) #18 RNF149 (ENSRFEG00010021913) #19 CREG2 (ENSRFEG00010021909) #20 RFX8 (ENSRFEG00010021895) #21 MAP4K4 (ENSRFEG00010021830) #22 IL1R2 (ENSRFEG00010021789) #23 IL1R1 (ENSRFEG00010021779) #24 IL1RL1 (ENSRFEG00010021764) #26 ENSRFEG00010021759 IL18RAP (ENSRFEG00010021752) #28 SLC9A4 (ENSRFEG00010021742) #29 SLC9A2 (ENSRFEG00010021729) #30 MFSD9 (ENSRFEG00010021723) #31 TMEM182 (ENSRFEG00010021717) #32 MRPS9 (ENSRFEG00010021700) #33 GPR45 (ENSRFEG00010021695) #34 ENSRFEG00010021688 TGFBRAP1 (ENSRFEG00010021674) #35 C2orf49 (ENSRFEG00010021666) #36 Microbat DUPLICATION Microbat MODERN SPECIES 1327 ENKUR (ENSMLUG00000007962) THNSL1 (ENSMLUG00000007989) ENSMLUG00000026194 GPR158 (ENSMLUG00000004392) ENSMLUG00000027318 #22 Microbat MODERN SPECIES 1262 ENSMLUG00000011562 TMEM182 (ENSMLUG00000012672) #32 MFSD9 (ENSMLUG00000012654) #31 RFX8 (ENSMLUG00000017785) #21 MAP4K4 (ENSMLUG00000005727) #22 IL1R2 (ENSMLUG00000008750) #23 Equus ANCESTRAL SPECIES 7 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Donkey MODERN SPECIES 26 EIF5B (ENSEASG00005018269) REV1 (ENSEASG00005018273) AFF3 (ENSEASG00005018275) ENSEASG00005018278 LONRF2 (ENSEASG00005018280) CHST10 (ENSEASG00005018281) ENSEASG00005037836 PDCL3 (ENSEASG00005018283) NPAS2 (ENSEASG00005018286) ENSEASG00005018290 TBC1D8 (ENSEASG00005018292) CNOT11 (ENSEASG00005018296) #18 RNF149 (ENSEASG00005018302) #19 CREG2 (ENSEASG00005018303) #20 RFX8 (ENSEASG00005018305) #21 MAP4K4 (ENSEASG00005018659) #22 IL1R2 (ENSEASG00005022037) #23 IL1R1 (ENSEASG00005022039) #24 IL1RL2 (ENSEASG00005022043) #25 IL1RL1 (ENSEASG00005022045) #26 IL18R1 (ENSEASG00005022053) #27 IL18RAP (ENSEASG00005022061) #28 SLC9A4 (ENSEASG00005022063) #29 SLC9A2 (ENSEASG00005022066) #30 TMEM182 (ENSEASG00005022068) #32 MFSD9 (ENSEASG00005038665) #31 ENSEASG00005035021 MRPS9 (ENSEASG00005017804) #33 ENSEASG00005024307 #34 TGFBRAP1 (ENSEASG00005017799) #35 C2orf49 (ENSEASG00005017798) #36 Horse DUPLICATION Horse MODERN SPECIES 286 ENSECAG00000048989 #22 Horse MODERN SPECIES 6 ENSECAG00000054214 ENSECAG00000044204 LONRF2 (ENSECAG00000020030) CHST10 (ENSECAG00000017766) NMS (ENSECAG00000017654) PDCL3 (ENSECAG00000015752) NPAS2 (ENSECAG00000000171) ENSECAG00000048409 ENSECAG00000050251 RPL31 (ENSECAG00000024079) TBC1D8 (ENSECAG00000012024) CNOT11 (ENSECAG00000011967) #18 RNF149 (ENSECAG00000011545) #19 CREG2 (ENSECAG00000010700) #20 RFX8 (ENSECAG00000008397) #21 MAP4K4 (ENSECAG00000008730) #22 IL1R2 (ENSECAG00000000288) #23 IL1R1 (ENSECAG00000016394) #24 IL1RL2 (ENSECAG00000011940) #25 IL1RL1 (ENSECAG00000009248) #26 IL18RAP (ENSECAG00000000214) #28 SLC9A4 (ENSECAG00000046965) #29 SLC9A2 (ENSECAG00000020613) #30 MFSD9 (ENSECAG00000019151) #31 TMEM182 (ENSECAG00000028489) #32 POU3F3 (ENSECAG00000015143) MRPS9 (ENSECAG00000011157) #33 GPR45 (ENSECAG00000006780) #34 TGFBRAP1 (ENSECAG00000007311) #35 C15H2orf49 (ENSECAG00000007267) #36 FHL2 (ENSECAG00000022203) #37 Artiodactyla ANCESTRAL SPECIES 16 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Artiodactyla_a ANCESTRAL SPECIES 15 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Camelidae ANCESTRAL SPECIES 56 ENSGT00390000017614.i ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a.b #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00390000011204 #33 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 ENSGT00940000157728.b Arabian camel MODERN SPECIES 20 LYG2 (ENSCDRG00005017902) TXNDC9 (ENSCDRG00005017853) EIF5B (ENSCDRG00005017819) REV1 (ENSCDRG00005017730) LONRF2 (ENSCDRG00005017680) CHST10 (ENSCDRG00005017620) PDCL3 (ENSCDRG00005017591) NPAS2 (ENSCDRG00005017274) ENSCDRG00005017146 TBC1D8 (ENSCDRG00005017001) CNOT11 (ENSCDRG00005016946) #18 RNF149 (ENSCDRG00005016913) #19 ENSCDRG00005016876 CREG2 (ENSCDRG00005016858) #20 RFX8 (ENSCDRG00005016685) #21 MAP4K4 (ENSCDRG00005005064) #22 IL1R2 (ENSCDRG00005004827) #23 IL1R1 (ENSCDRG00005004754) #24 IL1RL2 (ENSCDRG00005004695) #25 IL1RL1 (ENSCDRG00005004642) #26 ENSCDRG00005004605 #27 IL18R1 (ENSCDRG00005004590) #27 IL18RAP (ENSCDRG00005004542) #28 SLC9A4 (ENSCDRG00005004482) #29 SLC9A2 (ENSCDRG00005004418) #30 MFSD9 (ENSCDRG00005004383) #31 TMEM182 (ENSCDRG00005004295) #32 MRPS9 (ENSCDRG00005004005) #33 TGFBRAP1 (ENSCDRG00005003872) #35 C2orf49 (ENSCDRG00005003782) #36 FHL2 (ENSCDRG00005003681) #37 Artiodactyla_b ANCESTRAL SPECIES 14 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Cetacea ANCESTRAL SPECIES 16 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295.a ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00900000143808 ENSGT00390000011204.i #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Odontoceti ANCESTRAL SPECIES 15 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295.a ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00950000183128.B.hb.a ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204.i #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Odontoceti_a ANCESTRAL SPECIES 12 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295.a ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT00950000183128.B.hb.a ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204.i #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Odontoceti_b ANCESTRAL SPECIES 15 ENSGT00390000017614.j ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295.a ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020.a #19 ENSGT00390000005914.b #20 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204.i #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Monodontidae ANCESTRAL SPECIES 13 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295.a ENSGT00940000166403.b.b ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020.a #19 ENSGT00390000005914.b #20 ENSGT00950000183128.B.hb.a ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204.i #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Beluga whale MODERN SPECIES 35 EIF5B (ENSDLEG00000001347) REV1 (ENSDLEG00000001309) AFF3 (ENSDLEG00000001264) LONRF2 (ENSDLEG00000001228) CHST10 (ENSDLEG00000001204) PDCL3 (ENSDLEG00000001180) ENSDLEG00000001171 NPAS2 (ENSDLEG00000001128) RPL31 (ENSDLEG00000001096) TBC1D8 (ENSDLEG00000001036) ENSDLEG00000001007 CNOT11 (ENSDLEG00000000991) #18 RNF149 (ENSDLEG00000000967) #19 CREG2 (ENSDLEG00000000955) #20 ENSDLEG00000000933 MAP4K4 (ENSDLEG00000000765) #22 IL1R2 (ENSDLEG00000000699) #23 IL1R1 (ENSDLEG00000000603) #24 IL1RL2 (ENSDLEG00000000517) #25 IL1RL1 (ENSDLEG00000000477) #26 IL18R1 (ENSDLEG00000000451) #27 IL18RAP (ENSDLEG00000000416) #28 SLC9A4 (ENSDLEG00000000373) #29 SLC9A2 (ENSDLEG00000000339) #30 TMEM182 (ENSDLEG00000000313) #32 POU3F3 (ENSDLEG00000000279) MRPS9 (ENSDLEG00000000254) #33 GPR45 (ENSDLEG00000000138) #34 TGFBRAP1 (ENSDLEG00000006808) #35 CUNH2orf49 (ENSDLEG00000006801) #36 FHL2 (ENSDLEG00000006792) #37 Narwhal MODERN SPECIES 305 EIF5B (ENSMMNG00015019188) REV1 (ENSMMNG00015019156) AFF3 (ENSMMNG00015019041) LONRF2 (ENSMMNG00015018929) CHST10 (ENSMMNG00015018890) NMS (ENSMMNG00015018853) ENSMMNG00015018824 ENSMMNG00015018811 NPAS2 (ENSMMNG00015018743) ENSMMNG00015018686 TBC1D8 (ENSMMNG00015018656) CNOT11 (ENSMMNG00015018621) #18 ENSMMNG00015018578 #19 CREG2 (ENSMMNG00015018535) #20 ENSMMNG00015018517 MAP4K4 (ENSMMNG00015018426) #22 IL1R2 (ENSMMNG00015018361) #23 ENSMMNG00015018259 #24 IL1RL2 (ENSMMNG00015018231) #25 IL1RL1 (ENSMMNG00015018134) #26 IL18R1 (ENSMMNG00015018059) #27 IL18RAP (ENSMMNG00015018031) #28 SLC9A4 (ENSMMNG00015017997) #29 SLC9A2 (ENSMMNG00015017927) #30 TMEM182 (ENSMMNG00015017864) #32 MRPS9 (ENSMMNG00015017837) #33 GPR45 (ENSMMNG00015017827) #34 TGFBRAP1 (ENSMMNG00015017793) #35 C2orf49 (ENSMMNG00015017759) #36 FHL2 (ENSMMNG00015017708) #37 NCK2 (ENSMMNG00015017679) Vaquita MODERN SPECIES 4 ENSPSNG00000007529 EIF5B (ENSPSNG00000007568) REV1 (ENSPSNG00000007630) AFF3 (ENSPSNG00000007712) LONRF2 (ENSPSNG00000007991) CHST10 (ENSPSNG00000008016) ENSPSNG00000008033 PDCL3 (ENSPSNG00000008086) ENSPSNG00000008121 NPAS2 (ENSPSNG00000008150) TBC1D8 (ENSPSNG00000008508) CNOT11 (ENSPSNG00000008557) #18 ENSPSNG00000008577 ENSPSNG00000008607 #19 CREG2 (ENSPSNG00000008650) #20 MAP4K4 (ENSPSNG00000008803) #22 IL1R2 (ENSPSNG00000008975) #23 IL1R1 (ENSPSNG00000009010) #24 IL1RL2 (ENSPSNG00000009083) #25 IL1RL1 (ENSPSNG00000009203) #26 IL18R1 (ENSPSNG00000009248) #27 IL18RAP (ENSPSNG00000009292) #28 SLC9A4 (ENSPSNG00000009337) #29 SLC9A2 (ENSPSNG00000009398) #30 TMEM182 (ENSPSNG00000009492) #32 ENSPSNG00000009638 POU3F3 (ENSPSNG00000009683) MRPS9 (ENSPSNG00000009700) #33 GPR45 (ENSPSNG00000009739) #34 TGFBRAP1 (ENSPSNG00000009765) #35 C2orf49 (ENSPSNG00000009836) #36 Dolphin MODERN SPECIES 4836 MAP4K4 (ENSTTRG00000016919) #22 Sperm whale MODERN SPECIES 3 REV1 (ENSPCTG00005010733) AFF3 (ENSPCTG00005010804) LONRF2 (ENSPCTG00005011056) CHST10 (ENSPCTG00005011201) PDCL3 (ENSPCTG00005011242) ENSPCTG00005011279 ENSPCTG00005011296 TBC1D8 (ENSPCTG00005011332) RPL31 (ENSPCTG00005011533) CNOT11 (ENSPCTG00005011672) #18 ENSPCTG00005011743 RNF149 (ENSPCTG00005011779) #19 CREG2 (ENSPCTG00005011879) #20 RFX8 (ENSPCTG00005011936) #21 ENSPCTG00005012101 MAP4K4 (ENSPCTG00005012177) #22 IL1R2 (ENSPCTG00005012415) #23 IL1R1 (ENSPCTG00005012574) #24 IL1RL2 (ENSPCTG00005012665) #25 IL1RL1 (ENSPCTG00005012745) #26 IL18R1 (ENSPCTG00005012823) #27 IL18RAP (ENSPCTG00005012964) #28 SLC9A4 (ENSPCTG00005013259) #29 SLC9A2 (ENSPCTG00005013439) #30 ENSPCTG00005013632 TMEM182 (ENSPCTG00005013706) #32 POU3F3 (ENSPCTG00005013961) MRPS9 (ENSPCTG00005013984) #33 GPR45 (ENSPCTG00005014038) #34 TGFBRAP1 (ENSPCTG00005014059) #35 C12H2orf49 (ENSPCTG00005014133) #36 Blue whale MODERN SPECIES 4 TXNDC9 (ENSBMSG00010013808) EIF5B (ENSBMSG00010013793) REV1 (ENSBMSG00010013763) LONRF2 (ENSBMSG00010013677) CHST10 (ENSBMSG00010013659) NMS (ENSBMSG00010013648) ENSBMSG00010013633 NPAS2 (ENSBMSG00010013617) RPL31 (ENSBMSG00010013601) TBC1D8 (ENSBMSG00010013544) CNOT11 (ENSBMSG00010013479) #18 RNF149 (ENSBMSG00010013456) #19 CREG2 (ENSBMSG00010013438) #20 RFX8 (ENSBMSG00010013394) #21 ENSBMSG00010013376 MAP4K4 (ENSBMSG00010013309) #22 IL1R2 (ENSBMSG00010013260) #23 ENSBMSG00010013232 ENSBMSG00010013219 #24 IL1RL2 (ENSBMSG00010013205) #25 IL1RL1 (ENSBMSG00010022330) #26 IL18R1 (ENSBMSG00010022320) #27 IL18RAP (ENSBMSG00010022313) #28 SLC9A4 (ENSBMSG00010022308) #29 SLC9A2 (ENSBMSG00010022304) #30 ENSBMSG00010022301 TMEM182 (ENSBMSG00010022296) #32 POU3F3 (ENSBMSG00010022291) ENSBMSG00010022288 ENSBMSG00010022284 #33 ENSBMSG00010022281 #34 Pecora ANCESTRAL SPECIES 5 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00960000186941 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Yarkand deer MODERN SPECIES 2 AFF3 (ENSCHYG00000010762) ENSCHYG00000011108 ENSCHYG00000011143 CHST10 (ENSCHYG00000011261) NMS (ENSCHYG00000011359) PDCL3 (ENSCHYG00000011488) NPAS2 (ENSCHYG00000011537) ENSCHYG00000011833 TBC1D8 (ENSCHYG00000011938) ENSCHYG00000012198 CNOT11 (ENSCHYG00000012215) #18 RNF149 (ENSCHYG00000012281) #19 CREG2 (ENSCHYG00000012391) #20 RFX8 (ENSCHYG00000012449) #21 ENSCHYG00000012737 MAP4K4 (ENSCHYG00000012853) #22 IL1R2 (ENSCHYG00000014817) #23 IL1R1 (ENSCHYG00000015042) #24 IL1RL2 (ENSCHYG00000015248) #25 IL1RL1 (ENSCHYG00000015743) #26 IL18R1 (ENSCHYG00000015824) #27 IL18RAP (ENSCHYG00000015955) #28 SLC9A4 (ENSCHYG00000016105) #29 SLC9A2 (ENSCHYG00000016251) #30 MFSD9 (ENSCHYG00000016403) #31 TMEM182 (ENSCHYG00000016473) #32 ENSCHYG00000016649 MRPS9 (ENSCHYG00000016692) #33 GPR45 (ENSCHYG00000016902) #34 TGFBRAP1 (ENSCHYG00000016916) #35 ENSCHYG00000017002 #36 Percora_a ANCESTRAL SPECIES 13 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00960000186941 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Bovidae ANCESTRAL SPECIES 5 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00960000186941 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Caprinae ANCESTRAL SPECIES 9 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00960000186941 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Goat MODERN SPECIES 2 REV1 (ENSCHIG00000012748) AFF3 (ENSCHIG00000026653) LONRF2 (ENSCHIG00000016195) CHST10 (ENSCHIG00000019507) NMS (ENSCHIG00000009642) PDCL3 (ENSCHIG00000013469) NPAS2 (ENSCHIG00000023402) ENSCHIG00000010413 RPL31 (ENSCHIG00000023850) TBC1D8 (ENSCHIG00000023795) ENSCHIG00000007252 CNOT11 (ENSCHIG00000026686) #18 RNF149 (ENSCHIG00000024069) #19 CREG2 (ENSCHIG00000010213) #20 RFX8 (ENSCHIG00000011060) #21 MAP4K4 (ENSCHIG00000018604) #22 IL1R2 (ENSCHIG00000024086) #23 IL1R1 (ENSCHIG00000013024) #24 IL1RL2 (ENSCHIG00000025961) #25 IL1RL1 (ENSCHIG00000017390) #26 IL18R1 (ENSCHIG00000009915) #27 IL18RAP (ENSCHIG00000019718) #28 SLC9A4 (ENSCHIG00000003162) #29 SLC9A2 (ENSCHIG00000017048) #30 MFSD9 (ENSCHIG00000024665) #31 TMEM182 (ENSCHIG00000021627) #32 POU3F3 (ENSCHIG00000010081) MRPS9 (ENSCHIG00000022475) #33 ENSCHIG00000025798 GPR45 (ENSCHIG00000010870) #34 TGFBRAP1 (ENSCHIG00000015202) #35 Rambouillet Sheep MODERN SPECIES 19 TSGA10 (ENSOARG00020013054) C2orf15 (ENSOARG00020013004) MITD1 (ENSOARG00020012845) MRPL30 (ENSOARG00020012811) LYG2 (ENSOARG00020012789) ENSOARG00020012666 CHST10 (ENSOARG00020012569) PDCL3 (ENSOARG00020012507) NPAS2 (ENSOARG00020012376) RPL31 (ENSOARG00020012320) TBC1D8 (ENSOARG00020011910) CNOT11 (ENSOARG00020011860) #18 RNF149 (ENSOARG00020011743) #19 CREG2 (ENSOARG00020011676) #20 RFX8 (ENSOARG00020011330) #21 MAP4K4 (ENSOARG00020003040) #22 IL1R2 (ENSOARG00020002697) #23 IL1RL2 (ENSOARG00020002664) #25 IL1RL1 (ENSOARG00020002640) #26 IL18R1 (ENSOARG00020002611) #27 IL18RAP (ENSOARG00020002600) #28 SLC9A4 (ENSOARG00020002556) #29 SLC9A2 (ENSOARG00020002529) #30 ENSOARG00020002475 POU3F3 (ENSOARG00020002461) MRPS9 (ENSOARG00020002447) #33 GPR45 (ENSOARG00020002442) #34 TGFBRAP1 (ENSOARG00020002401) #35 C2orf49 (ENSOARG00020002379) #36 FHL2 (ENSOARG00020002357) #37 ENSOARG00020002342 Bovinae ANCESTRAL SPECIES 4 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 American bison DUPLICATION American bison MODERN SPECIES 3321 DNAJC1 (ENSBBBG00000014621) ENSBBBG00000014606 COMMD3 (ENSBBBG00000014594) BMI1 (ENSBBBG00000014582) SPAG6 (ENSBBBG00000007604) PIP4K2A (ENSBBBG00000003407) ARMC3 (ENSBBBG00000003388) MSRB2 (ENSBBBG00000014479) PTF1A (ENSBBBG00000014471) KIAA1217 (ENSBBBG00000014434) ARHGAP21 (ENSBBBG00000003208) PRTFDC1 (ENSBBBG00000014140) ENKUR (ENSBBBG00000014121) THNSL1 (ENSBBBG00000003174) GPR158 (ENSBBBG00000008747) ENSBBBG00000014091 #22 GAD2 (ENSBBBG00000014080) ENSBBBG00000003133 OPTN (ENSBBBG00000014045) MCM10 (ENSBBBG00000003086) UCMA (ENSBBBG00000008745) ENSBBBG00000013955 ENSBBBG00000003045 SEPHS1 (ENSBBBG00000013939) ENSBBBG00000003021 PRPF18 (ENSBBBG00000013908) FRMD4A (ENSBBBG00000013895) FAM107B (ENSBBBG00000013875) CDNF (ENSBBBG00000013850) HSPA14 (ENSBBBG00000002971) SUV39H2 (ENSBBBG00000013820) American bison MODERN SPECIES 3198 DHRS9 (ENSBBBG00000014077) LRP2 (ENSBBBG00000014043) BBS5 (ENSBBBG00000003014) KLHL41 (ENSBBBG00000002995) FASTKD1 (ENSBBBG00000002990) PPIG (ENSBBBG00000002973) CFAP210 (ENSBBBG00000013801) PHOSPHO2 (ENSBBBG00000002952) KLHL23 (ENSBBBG00000013780) SSB (ENSBBBG00000002948) METTL5 (ENSBBBG00000013751) UBR3 (ENSBBBG00000013716) ENSBBBG00000013654 ENSBBBG00000008906 #22 American bison MODERN SPECIES 3359 TXNDC9 (ENSBBBG00000000341) EIF5B (ENSBBBG00000000362) REV1 (ENSBBBG00000000447) AFF3 (ENSBBBG00000023141) ENSBBBG00000023006 CHST10 (ENSBBBG00000022987) NMS (ENSBBBG00000022959) PDCL3 (ENSBBBG00000022953) NPAS2 (ENSBBBG00000022942) ENSBBBG00000022904 TBC1D8 (ENSBBBG00000022871) CNOT11 (ENSBBBG00000022819) #18 RNF149 (ENSBBBG00000022804) #19 CREG2 (ENSBBBG00000006004) #20 RFX8 (ENSBBBG00000008792) #21 MAP4K4 (ENSBBBG00000022681) #22 IL1R2 (ENSBBBG00000021615) #23 IL1R1 (ENSBBBG00000021590) #24 IL1RL2 (ENSBBBG00000021531) #25 IL1RL1 (ENSBBBG00000021510) #26 IL18R1 (ENSBBBG00000008404) #27 IL18RAP (ENSBBBG00000021455) #28 SLC9A4 (ENSBBBG00000021388) #29 SLC9A2 (ENSBBBG00000021364) #30 ENSBBBG00000008785 TMEM182 (ENSBBBG00000021321) #32 ENSBBBG00000021300 MRPS9 (ENSBBBG00000021295) #33 GPR45 (ENSBBBG00000021287) #34 TGFBRAP1 (ENSBBBG00000007633) #35 C2orf49 (ENSBBBG00000021257) #36 Bos ANCESTRAL SPECIES 5 ENSGT01100000263480.a.a.b.b.b.a.b.b.b.b.b.a ENSGT00940000163243 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Bos_b ANCESTRAL SPECIES 9 ENSGT00940000162583 ENSGT01100000263480.a.a.b.b.b.a.b.b.b.b.b.a ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Hybrid Bos Indicus MODERN SPECIES 2 ENSBIXG00005013235 ENSBIXG00005013227 ENSBIXG00005013219 CHST10 (ENSBIXG00005013201) NMS (ENSBIXG00005013175) PDCL3 (ENSBIXG00005005388) ENSBIXG00005013138 NPAS2 (ENSBIXG00005007752) ENSBIXG00005013079 ENSBIXG00005013066 TBC1D8 (ENSBIXG00005001459) CNOT11 (ENSBIXG00005012899) #18 RNF149 (ENSBIXG00005012860) #19 CREG2 (ENSBIXG00005001420) #20 RFX8 (ENSBIXG00005001409) #21 MAP4K4 (ENSBIXG00005012631) #22 IL1R2 (ENSBIXG00005012513) #23 IL1R1 (ENSBIXG00005012489) #24 IL1RL2 (ENSBIXG00005006426) #25 IL1RL1 (ENSBIXG00005012422) #26 IL18R1 (ENSBIXG00005012403) #27 IL18RAP (ENSBIXG00005001308) #28 SLC9A4 (ENSBIXG00005001305) #29 SLC9A2 (ENSBIXG00005005827) #30 MFSD9 (ENSBIXG00005012287) #31 TMEM182 (ENSBIXG00005012268) #32 POU3F3 (ENSBIXG00005012117) MRPS9 (ENSBIXG00005012091) #33 GPR45 (ENSBIXG00005001249) #34 TGFBRAP1 (ENSBIXG00005001243) #35 ENSBIXG00005001221 Cow MODERN SPECIES 2 MRPL30 (ENSBTAG00000038949) TXNDC9 (ENSBTAG00000004544) EIF5B (ENSBTAG00000034255) REV1 (ENSBTAG00000043999) AFF3 (ENSBTAG00000012449) CHST10 (ENSBTAG00000004328) NMS (ENSBTAG00000034184) PDCL3 (ENSBTAG00000009962) NPAS2 (ENSBTAG00000019697) TBC1D8 (ENSBTAG00000025898) CNOT11 (ENSBTAG00000008267) #18 RNF149 (ENSBTAG00000008269) #19 CREG2 (ENSBTAG00000021161) #20 RFX8 (ENSBTAG00000033998) #21 ENSBTAG00000054755 MAP4K4 (ENSBTAG00000013023) #22 IL1R2 (ENSBTAG00000006343) #23 IL1R1 (ENSBTAG00000005273) #24 IL1RL2 (ENSBTAG00000005704) #25 IL1RL1 (ENSBTAG00000018571) #26 IL18R1 (ENSBTAG00000001034) #27 IL18RAP (ENSBTAG00000033748) #28 SLC9A4 (ENSBTAG00000024075) #29 SLC9A2 (ENSBTAG00000001706) #30 MFSD9 (ENSBTAG00000001714) #31 TMEM182 (ENSBTAG00000038462) #32 POU3F3 (ENSBTAG00000050523) MRPS9 (ENSBTAG00000006150) #33 GPR45 (ENSBTAG00000048142) #34 TGFBRAP1 (ENSBTAG00000021731) #35 C11H2orf49 (ENSBTAG00000012332) #36 Bos_a ANCESTRAL SPECIES 6 ENSGT00940000163243 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT01100000263480.a.b.a.a.b.b.a.a ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Wild yak DUPLICATION Wild yak MODERN SPECIES 2296 ENSBMUG00000002206 #22 GAD2 (ENSBMUG00000002171) ENSBMUG00000002130 ENSBMUG00000002093 Wild yak MODERN SPECIES 483 RFX8 (ENSBMUG00000006169) #21 MAP4K4 (ENSBMUG00000006599) #22 IL1R2 (ENSBMUG00000007587) #23 IL1R1 (ENSBMUG00000007612) #24 Domestic yak DUPLICATION Domestic yak MODERN SPECIES 3 ABI1 (ENSBGRG00000014062) PDSS1 (ENSBGRG00000014215) CCNY (ENSBGRG00000014486) CREM (ENSBGRG00000014601) ENSBGRG00000014932 ENSBGRG00000016604 ENSBGRG00000019555 ENSBGRG00000019928 NEBL (ENSBGRG00000020572) ENSBGRG00000021543 ENSBGRG00000021697 COMMD3 (ENSBGRG00000022691) BMI1 (ENSBGRG00000022726) ENSBGRG00000024687 ENSBGRG00000025471 ENSBGRG00000025641 #22 ENSBGRG00000025653 FZD8 (ENSBGRG00000010581) ENSBGRG00000011835 ENSBGRG00000012765 PRPF18 (ENSBGRG00000012792) ENSBGRG00000013679 ENSBGRG00000013757 MEIG1 (ENSBGRG00000015055) ACBD7 (ENSBGRG00000015230) ENSBGRG00000016221 ENSBGRG00000016312 ENSBGRG00000016342 ENSBGRG00000018950 VIM (ENSBGRG00000018970) ENSBGRG00000022775 Domestic yak MODERN SPECIES 28 ENSBGRG00000026836 REV1 (ENSBGRG00000026837) AFF3 (ENSBGRG00000026841) ENSBGRG00000026843 ENSBGRG00000026846 NMS (ENSBGRG00000026847) PDCL3 (ENSBGRG00000026849) NPAS2 (ENSBGRG00000003623) ENSBGRG00000003883 ENSBGRG00000003902 TBC1D8 (ENSBGRG00000004001) CNOT11 (ENSBGRG00000004100) #18 RNF149 (ENSBGRG00000004146) #19 CREG2 (ENSBGRG00000004222) #20 RFX8 (ENSBGRG00000004305) #21 MAP4K4 (ENSBGRG00000004440) #22 IL1R2 (ENSBGRG00000004837) #23 IL1R1 (ENSBGRG00000004895) #24 ENSBGRG00000004971 IL1RL2 (ENSBGRG00000004988) #25 IL1RL1 (ENSBGRG00000005024) #26 IL18R1 (ENSBGRG00000005129) #27 IL18RAP (ENSBGRG00000005200) #28 SLC9A4 (ENSBGRG00000005286) #29 SLC9A2 (ENSBGRG00000005356) #30 MFSD9 (ENSBGRG00000005489) #31 TMEM182 (ENSBGRG00000005547) #32 ENSBGRG00000005713 MRPS9 (ENSBGRG00000005733) #33 GPR45 (ENSBGRG00000005783) #34 TGFBRAP1 (ENSBGRG00000005800) #35 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 1194 BMI1 (ENSMMSG00000010401) SPAG6 (ENSMMSG00000009939) PIP4K2A (ENSMMSG00000009845) ENSMMSG00000009832 ARMC3 (ENSMMSG00000009602) MSRB2 (ENSMMSG00000009568) PTF1A (ENSMMSG00000009546) OTUD1 (ENSMMSG00000009420) KIAA1217 (ENSMMSG00000009308) ARHGAP21 (ENSMMSG00000008987) PRTFDC1 (ENSMMSG00000008847) ENSMMSG00000008819 ENKUR (ENSMMSG00000008794) THNSL1 (ENSMMSG00000008782) GPR158 (ENSMMSG00000008659) ENSMMSG00000008632 #22 ENSMMSG00000008510 GAD2 (ENSMMSG00000008371) FZD8 (ENSMMSG00000008339) OPTN (ENSMMSG00000008278) MCM10 (ENSMMSG00000008245) UCMA (ENSMMSG00000008183) PHYH (ENSMMSG00000008109) SEPHS1 (ENSMMSG00000008019) ENSMMSG00000007973 PRPF18 (ENSMMSG00000007919) FRMD4A (ENSMMSG00000007794) ENSMMSG00000007764 FAM107B (ENSMMSG00000007738) CDNF (ENSMMSG00000007698) HSPA14 (ENSMMSG00000007632) Siberian musk deer MODERN SPECIES 245 EIF5B (ENSMMSG00000001949) REV1 (ENSMMSG00000001921) AFF3 (ENSMMSG00000001853) ENSMMSG00000001804 CHST10 (ENSMMSG00000001776) NMS (ENSMMSG00000001744) ENSMMSG00000001724 ENSMMSG00000001713 NPAS2 (ENSMMSG00000001642) ENSMMSG00000001578 TBC1D8 (ENSMMSG00000001494) CNOT11 (ENSMMSG00000001455) #18 RNF149 (ENSMMSG00000001408) #19 CREG2 (ENSMMSG00000001384) #20 RFX8 (ENSMMSG00000001356) #21 MAP4K4 (ENSMMSG00000001158) #22 IL1R2 (ENSMMSG00000001036) #23 IL1R1 (ENSMMSG00000000980) #24 IL1RL2 (ENSMMSG00000000923) #25 IL1RL1 (ENSMMSG00000000795) #26 IL18R1 (ENSMMSG00000000733) #27 IL18RAP (ENSMMSG00000000698) #28 SLC9A4 (ENSMMSG00000000659) #29 SLC9A2 (ENSMMSG00000000626) #30 MFSD9 (ENSMMSG00000000598) #31 TMEM182 (ENSMMSG00000000564) #32 ENSMMSG00000000543 POU3F3 (ENSMMSG00000000528) MRPS9 (ENSMMSG00000000500) #33 GPR45 (ENSMMSG00000000484) #34 TGFBRAP1 (ENSMMSG00000000447) #35 Suina ANCESTRAL SPECIES 50 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Chacoan peccary DUPLICATION Chacoan peccary MODERN SPECIES 48 COMMD3 (ENSCWAG00000006540) BMI1 (ENSCWAG00000006472) SPAG6 (ENSCWAG00000006200) PIP4K2A (ENSCWAG00000006142) ARMC3 (ENSCWAG00000005912) MSRB2 (ENSCWAG00000005884) PTF1A (ENSCWAG00000005861) OTUD1 (ENSCWAG00000005832) KIAA1217 (ENSCWAG00000004897) ARHGAP21 (ENSCWAG00000003379) ENSCWAG00000003369 PRTFDC1 (ENSCWAG00000003354) ENKUR (ENSCWAG00000003334) THNSL1 (ENSCWAG00000003329) GPR158 (ENSCWAG00000003292) ENSCWAG00000003264 #22 GAD2 (ENSCWAG00000003224) APBB1IP (ENSCWAG00000003183) PDSS1 (ENSCWAG00000003156) ABI1 (ENSCWAG00000002988) ACBD5 (ENSCWAG00000002902) MASTL (ENSCWAG00000002823) YME1L1 (ENSCWAG00000002781) ENSCWAG00000002741 OPTN (ENSCWAG00000002673) MCM10 (ENSCWAG00000002570) UCMA (ENSCWAG00000002531) PHYH (ENSCWAG00000002511) SEPHS1 (ENSCWAG00000002484) BEND7 (ENSCWAG00000002446) PRPF18 (ENSCWAG00000002422) Chacoan peccary MODERN SPECIES 184 TXNDC9 (ENSCWAG00000001148) EIF5B (ENSCWAG00000001187) REV1 (ENSCWAG00000001226) AFF3 (ENSCWAG00000001275) LONRF2 (ENSCWAG00000001433) CHST10 (ENSCWAG00000001461) NMS (ENSCWAG00000001481) PDCL3 (ENSCWAG00000001508) NPAS2 (ENSCWAG00000001527) ENSCWAG00000001562 TBC1D8 (ENSCWAG00000001592) CNOT11 (ENSCWAG00000001646) #18 RNF149 (ENSCWAG00000001666) #19 CREG2 (ENSCWAG00000001676) #20 RFX8 (ENSCWAG00000001686) #21 MAP4K4 (ENSCWAG00000001762) #22 IL1R2 (ENSCWAG00000001985) #23 IL1R1 (ENSCWAG00000002017) #24 IL1RL2 (ENSCWAG00000002048) #25 IL1RL1 (ENSCWAG00000002096) #26 IL18R1 (ENSCWAG00000002161) #27 IL18RAP (ENSCWAG00000002187) #28 SLC9A4 (ENSCWAG00000002237) #29 SLC9A2 (ENSCWAG00000002265) #30 MFSD9 (ENSCWAG00000002292) #31 TMEM182 (ENSCWAG00000002304) #32 POU3F3 (ENSCWAG00000002326) MRPS9 (ENSCWAG00000002345) #33 GPR45 (ENSCWAG00000002373) #34 TGFBRAP1 (ENSCWAG00000002382) #35 C2orf49 (ENSCWAG00000002401) #36 Pig DUPLICATION Pig MODERN SPECIES 1 PIP4K2A (ENSSSCG00000011079) ENSSSCG00000045344 ARMC3 (ENSSSCG00000011078) MSRB2 (ENSSSCG00000011077) PTF1A (ENSSSCG00000030662) ENSSSCG00000058253 OTUD1 (ENSSSCG00000011076) KIAA1217 (ENSSSCG00000011075) ARHGAP21 (ENSSSCG00000011074) ENSSSCG00000059535 ENSSSCG00000037690 PRTFDC1 (ENSSSCG00000028135) ENKUR (ENSSSCG00000032929) THNSL1 (ENSSSCG00000011071) GPR158 (ENSSSCG00000038536) ENSSSCG00000011059 #22 GAD2 (ENSSSCG00000011060) APBB1IP (ENSSSCG00000030156) PDSS1 (ENSSSCG00000011061) ABI1 (ENSSSCG00000024127) ACBD5 (ENSSSCG00000011064) MASTL (ENSSSCG00000011065) ENSSSCG00000011068 OPTN (ENSSSCG00000023247) MCM10 (ENSSSCG00000035059) UCMA (ENSSSCG00000038864) PHYH (ENSSSCG00000039244) SEPHS1 (ENSSSCG00000031659) BEND7 (ENSSSCG00000032984) PRPF18 (ENSSSCG00000026354) FRMD4A (ENSSSCG00000011056) Pig MODERN SPECIES 11 TXNDC9 (ENSSSCG00000008181) EIF5B (ENSSSCG00000008180) REV1 (ENSSSCG00000008179) ENSSSCG00000041855 AFF3 (ENSSSCG00000055832) LONRF2 (ENSSSCG00000008176) CHST10 (ENSSSCG00000008175) PDCL3 (ENSSSCG00000033885) NPAS2 (ENSSSCG00000008171) ENSSSCG00000008170 TBC1D8 (ENSSSCG00000008169) CNOT11 (ENSSSCG00000008167) #18 RNF149 (ENSSSCG00000008168) #19 CREG2 (ENSSSCG00000008166) #20 RFX8 (ENSSSCG00000008165) #21 MAP4K4 (ENSSSCG00000008164) #22 IL1R2 (ENSSSCG00000028331) #23 IL1R1 (ENSSSCG00000008162) #24 ENSSSCG00000037359 IL1RL2 (ENSSSCG00000023550) #25 IL1RL1 (ENSSSCG00000032795) #26 IL18R1 (ENSSSCG00000008159) #27 IL18RAP (ENSSSCG00000008157) #28 SLC9A4 (ENSSSCG00000008155) #29 SLC9A2 (ENSSSCG00000008153) #30 MFSD9 (ENSSSCG00000038714) #31 TMEM182 (ENSSSCG00000008150) #32 ENSSSCG00000057831 POU3F3 (ENSSSCG00000022096) MRPS9 (ENSSSCG00000028020) #33 GPR45 (ENSSSCG00000025772) #34 Atlantogenata ANCESTRAL SPECIES 9 ENSGT00390000002220 ENSGT00950000183150.a.b ENSGT00940000157564 ENSGT00940000158665 ENSGT00940000157232 ENSGT00390000002753 ENSGT00940000158859 ENSGT01030000234607.B ENSGT00940000157954 ENSGT00730000111149 ENSGT00390000007741.b ENSGT00940000159106 ENSGT00830000128380 ENSGT00390000000227 ENSGT00950000183075.a.b ENSGT00940000155063 #22 ENSGT00940000159309 ENSGT00940000160673 ENSGT00390000017846 ENSGT00940000155526 ENSGT00390000008686.d ENSGT00950000182984.b.a.b ENSGT00940000159683 ENSGT00390000012728 ENSGT00950000183197.b.b ENSGT00940000155442 ENSGT00940000155963 ENSGT00390000007069 ENSGT00940000157735 ENSGT00940000160029 ENSGT00940000160127 Xenarthra ANCESTRAL SPECIES 1245 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 Armadillo MODERN SPECIES 3112 MAP4K4 (ENSDNOG00000006844) #22 IL1R2 (ENSDNOG00000048404) #23 IL1R1 (ENSDNOG00000007656) #24 IL1RL2 (ENSDNOG00000009374) #25 Sloth MODERN SPECIES 6110 MAP4K4 (ENSCHOG00000009479) #22 Afrotheria ANCESTRAL SPECIES 1 ENSGT00390000002220 ENSGT00950000183150.a.b ENSGT00940000157564 ENSGT00940000158665 ENSGT00940000157232 ENSGT00390000002753 ENSGT00940000158859 ENSGT01030000234607.B ENSGT00940000157954 ENSGT00730000111149 ENSGT00390000007741.b ENSGT00940000159106 ENSGT00830000128380 ENSGT00390000000227 ENSGT00950000183075.a.b ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00940000159309 ENSGT00940000160673 ENSGT00390000017846 ENSGT00940000155526 ENSGT00390000008686.d ENSGT00950000182984.b.a.b ENSGT00940000159683 ENSGT00390000012728 ENSGT00950000183197.b.b ENSGT00940000155442 ENSGT00940000155963 ENSGT00390000007069 ENSGT00940000157735 ENSGT00940000160029 Afrotheria_a ANCESTRAL SPECIES 1 ENSGT00390000002220 ENSGT00950000183150.a.b ENSGT00940000157564 ENSGT00940000158665 ENSGT00940000157232 ENSGT00390000002753 ENSGT00940000158859 ENSGT01030000234607.B ENSGT00940000157954 ENSGT00730000111149 ENSGT00390000007741.b ENSGT00940000159106 ENSGT00830000128380 ENSGT00390000000227 ENSGT00950000183075.a.b ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00940000159309 ENSGT00940000160673 ENSGT00390000017846 ENSGT00940000155526 ENSGT00390000008686.d ENSGT00950000182984.b.a.b ENSGT00940000159683 ENSGT00390000012728 ENSGT00950000183197.b.b ENSGT00940000155442 ENSGT00940000155963 ENSGT00390000007069 ENSGT00940000157735 ENSGT00940000160029 Hyrax MODERN SPECIES 5788 MAP4K4 (ENSPCAG00000002276) #22 Elephant DUPLICATION Elephant MODERN SPECIES 301 G6PC2 (ENSLAFG00000006146) ABCB11 (ENSLAFG00000006147) DHRS9 (ENSLAFG00000007396) LRP2 (ENSLAFG00000013646) BBS5 (ENSLAFG00000009805) KLHL41 (ENSLAFG00000009811) FASTKD1 (ENSLAFG00000016410) PPIG (ENSLAFG00000008181) ENSLAFG00000027745 CFAP210 (ENSLAFG00000012564) PHOSPHO2 (ENSLAFG00000020903) KLHL23 (ENSLAFG00000015157) ENSLAFG00000000867 METTL5 (ENSLAFG00000018044) UBR3 (ENSLAFG00000021771) ENSLAFG00000031946 #22 ENSLAFG00000002713 SP5 (ENSLAFG00000002720) ENSLAFG00000002692 GAD1 (ENSLAFG00000002694) GORASP2 (ENSLAFG00000005881) TLK1 (ENSLAFG00000004201) METTL8 (ENSLAFG00000003151) DCAF17 (ENSLAFG00000003558) CYBRD1 (ENSLAFG00000016525) DYNC1I2 (ENSLAFG00000018517) SLC25A12 (ENSLAFG00000018521) HAT1 (ENSLAFG00000010213) METAP1D (ENSLAFG00000008879) DLX1 (ENSLAFG00000003551) DLX2 (ENSLAFG00000003554) Elephant MODERN SPECIES 278 AFF3 (ENSLAFG00000012884) ENSLAFG00000026678 LONRF2 (ENSLAFG00000005456) CHST10 (ENSLAFG00000005461) NMS (ENSLAFG00000029888) PDCL3 (ENSLAFG00000021615) ENSLAFG00000026504 NPAS2 (ENSLAFG00000016336) ENSLAFG00000027873 TBC1D8 (ENSLAFG00000016341) CNOT11 (ENSLAFG00000006411) #18 RNF149 (ENSLAFG00000030178) #19 ENSLAFG00000006644 CREG2 (ENSLAFG00000011751) #20 RFX8 (ENSLAFG00000011754) #21 MAP4K4 (ENSLAFG00000005765) #22 ENSLAFG00000013679 #23 ENSLAFG00000021985 #23 IL1R1 (ENSLAFG00000012677) #24 IL1RL2 (ENSLAFG00000012683) #25 IL1RL1 (ENSLAFG00000007804) #26 IL18R1 (ENSLAFG00000007809) #27 IL18RAP (ENSLAFG00000007815) #28 SLC9A4 (ENSLAFG00000011553) #29 SLC9A2 (ENSLAFG00000011557) #30 MFSD9 (ENSLAFG00000011208) #31 TMEM182 (ENSLAFG00000011215) #32 ENSLAFG00000027526 MRPS9 (ENSLAFG00000008097) #33 GPR45 (ENSLAFG00000010319) #34 TGFBRAP1 (ENSLAFG00000010322) #35 Marsupialia ANCESTRAL SPECIES 8 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Marsupialia_b ANCESTRAL SPECIES 7 ENSGT00390000000367 ENSGT00950000183034.A ENSGT00390000017898 ENSGT01010000222287.B.b.a.a.a ENSGT00940000158913 ENSGT00950000182832.B ENSGT00530000063353.a.b.b ENSGT00940000155947 ENSGT00390000017040 ENSGT00940000154477 ENSGT00940000156324 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Diprotodontia ANCESTRAL SPECIES 49 ENSGT00390000012239 ENSGT00390000000367 ENSGT00950000183034.A ENSGT00390000017898 ENSGT01010000222287.B.b.a.a.a ENSGT00940000158913 ENSGT00950000182832.B ENSGT00530000063353.a.b.b ENSGT00940000155947 ENSGT00940000154477 ENSGT00940000156324 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Diprotodontia_a ANCESTRAL SPECIES 47 ENSGT00390000000367 ENSGT00950000183034.A ENSGT00390000017898 ENSGT01010000222287.B.b.a.a.a ENSGT00390000010152.n ENSGT00940000158913 ENSGT00950000182832.B ENSGT00530000063353.a.b.b ENSGT00940000155947 ENSGT00940000154477 ENSGT00940000156324 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.b #24 ENSGT01090000259985.b.a.b.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Common wonbat MODERN SPECIES 1041 ENSVURG00010014786 ENSVURG00010014793 ENSVURG00010014797 GBE1 (ENSVURG00010014817) ENSVURG00010014836 ENSVURG00010014848 ENSVURG00010014853 ROBO1 (ENSVURG00010014872) ENSVURG00010014978 ROBO2 (ENSVURG00010015022) CNOT11 (ENSVURG00010015327) #18 ENSVURG00010015341 #19 CREG2 (ENSVURG00010015348) #20 RFX8 (ENSVURG00010015354) #21 ENSVURG00010015368 MAP4K4 (ENSVURG00010015448) #22 ENSVURG00010016987 ENSVURG00010016992 #23 koala MODERN SPECIES 29 ENSPCIG00000036325 ENSPCIG00000023117 LDLRAD1 (ENSPCIG00000023114) TMEM59 (ENSPCIG00000023112) ENSPCIG00000023107 CDCP2 (ENSPCIG00000031096) ENSPCIG00000023102 MRPL37 (ENSPCIG00000023098) SSBP3 (ENSPCIG00000023094) ENSPCIG00000008690 ROBO2 (ENSPCIG00000027463) CNOT11 (ENSPCIG00000016312) #18 ENSPCIG00000016308 #19 CREG2 (ENSPCIG00000016307) #20 RFX8 (ENSPCIG00000013097) #21 MAP4K4 (ENSPCIG00000013142) #22 ENSPCIG00000009335 #23 ENSPCIG00000006764 ENSPCIG00000018434 #24 ENSPCIG00000018435 #25 ENSPCIG00000018436 #26 ENSPCIG00000001399 #27 ENSPCIG00000001413 #28 SLC9A4 (ENSPCIG00000001448) #29 SLC9A2 (ENSPCIG00000001485) #30 MFSD9 (ENSPCIG00000034191) #31 TMEM182 (ENSPCIG00000001521) #32 ENSPCIG00000033918 ENSPCIG00000019202 POU3F3 (ENSPCIG00000019192) MRPS9 (ENSPCIG00000016698) #33 Wallaby MODERN SPECIES 8258 MAP4K4 (ENSMEUG00000016619) #22 Tasmanian devil MODERN SPECIES 2 HTR1F (ENSSHAG00000023648) ENSSHAG00000008747 CHMP2B (ENSSHAG00000023278) ENSSHAG00000001836 ENSSHAG00000021081 ENSSHAG00000013236 ENSSHAG00000016491 ENSSHAG00000000936 ENSSHAG00000003799 ENSSHAG00000030581 ENSSHAG00000025373 ENSSHAG00000003760 ENSSHAG00000032388 ENSSHAG00000022641 #18 RNF149 (ENSSHAG00000007065) #19 MAP4K4 (ENSSHAG00000002416) #22 ENSSHAG00000002423 #23 IL1R1 (ENSSHAG00000005754) #24 ENSSHAG00000028997 #25 ENSSHAG00000007642 #26 ENSSHAG00000007987 #27 IL18RAP (ENSSHAG00000001935) #28 SLC9A4 (ENSSHAG00000003225) #29 SLC9A2 (ENSSHAG00000006905) #30 MFSD9 (ENSSHAG00000008326) #31 TMEM182 (ENSSHAG00000023226) #32 ENSSHAG00000002774 ENSSHAG00000017944 MRPS9 (ENSSHAG00000026898) #33 GPR45 (ENSSHAG00000018314) #34 ENSSHAG00000022684 Opossum DUPLICATION Opossum MODERN SPECIES 7 ARMC3 (ENSMODG00000008994) ENSMODG00000029535 MSRB2 (ENSMODG00000045397) ENSMODG00000037006 PTF1A (ENSMODG00000008946) ENSMODG00000028850 OTUD1 (ENSMODG00000008914) ENSMODG00000039733 ENSMODG00000008903 ARHGAP21 (ENSMODG00000008781) PRTFDC1 (ENSMODG00000008740) ENKUR (ENSMODG00000008730) THNSL1 (ENSMODG00000024109) GPR158 (ENSMODG00000024111) ENSMODG00000044147 ENSMODG00000008687 #22 ENSMODG00000028716 ENSMODG00000028877 ENSMODG00000027922 GAD2 (ENSMODG00000008626) APBB1IP (ENSMODG00000008583) ENSMODG00000036851 PDSS1 (ENSMODG00000008533) ABI1 (ENSMODG00000008499) ACBD5 (ENSMODG00000008472) MASTL (ENSMODG00000008423) YME1L1 (ENSMODG00000008389) ENSMODG00000008258 RAB18 (ENSMODG00000008253) MKX (ENSMODG00000008244) ENSMODG00000008232 Opossum MODERN SPECIES 6 RNF149 (ENSMODG00000001750) #19 CREG2 (ENSMODG00000036475) #20 ENSMODG00000045925 ENSMODG00000029094 ENSMODG00000049022 ENSMODG00000028572 ENSMODG00000042445 ENSMODG00000025181 ENSMODG00000007958 ENSMODG00000050607 ENSMODG00000025216 ENSMODG00000048748 ENSMODG00000002051 ENSMODG00000025200 RFX8 (ENSMODG00000025480) #21 MAP4K4 (ENSMODG00000002250) #22 ENSMODG00000002266 ENSMODG00000002293 #23 ENSMODG00000042076 #24 ENSMODG00000036695 #24 ENSMODG00000002351 #25 ENSMODG00000002368 #26 ENSMODG00000002385 #27 ENSMODG00000002401 #28 SLC9A4 (ENSMODG00000002416) #29 ENSMODG00000041133 SLC9A2 (ENSMODG00000002434) #30 MFSD9 (ENSMODG00000039237) #31 TMEM182 (ENSMODG00000002447) #32 ENSMODG00000042494 ENSMODG00000043109 Platypus MODERN SPECIES 11 ENSOANG00000016066 ENSOANG00000039527 OLFM4 (ENSOANG00000037547) ENSOANG00000048430 CNMD (ENSOANG00000010093) SUGT1 (ENSOANG00000020356) ELF1 (ENSOANG00000013391) WBP4 (ENSOANG00000039659) ENSOANG00000042040 ENSOANG00000050275 MTRF1 (ENSOANG00000003383) CNOT11 (ENSOANG00000013148) #18 RNF149 (ENSOANG00000003086) #19 ENSOANG00000002853 ENSOANG00000016016 MAP4K4 (ENSOANG00000008236) #22 IL1R2 (ENSOANG00000008234) #23 IL1R1 (ENSOANG00000011165) #24 ENSOANG00000014837 #25 ENSOANG00000011164 #26 ENSOANG00000044038 #27 ENSOANG00000012240 #28 SLC9A4 (ENSOANG00000012242) #29 SLC9A2 (ENSOANG00000012243) #30 MFSD9 (ENSOANG00000012244) #31 TMEM182 (ENSOANG00000012245) #32 ENSOANG00000047201 ENSOANG00000039031 MRPS9 (ENSOANG00000012373) #33 GPR45 (ENSOANG00000047747) #34 TGFBRAP1 (ENSOANG00000010577) #35 Sauria ANCESTRAL SPECIES 2 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT01060000250476 ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Lepidosauria ANCESTRAL SPECIES 4 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT01060000250476 ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Episquamata ANCESTRAL SPECIES 2 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT01060000250476 ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000161561.j ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Laterata ANCESTRAL SPECIES ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000161561.j.e ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Common wall lizard MODERN SPECIES 12 PDCL3 (ENSPMRG00000005817) ENSPMRG00000005820 NPAS2 (ENSPMRG00000005837) ENSPMRG00000005864 TBC1D8 (ENSPMRG00000005873) ENSPMRG00000005889 CNOT11 (ENSPMRG00000005895) #18 RNF149 (ENSPMRG00000005903) #19 CREG2 (ENSPMRG00000005921) #20 RFX8 (ENSPMRG00000005942) #21 ENSPMRG00000005973 ENSPMRG00000005994 ENSPMRG00000006005 ENSPMRG00000006023 ENSPMRG00000006042 MAP4K4 (ENSPMRG00000007014) #22 IL1R2 (ENSPMRG00000011616) #23 ENSPMRG00000011619 #25 ENSPMRG00000011629 #25 ENSPMRG00000011636 #26 IL18R1 (ENSPMRG00000011642) #27 IL18RAP (ENSPMRG00000011659) #28 SLC9A4 (ENSPMRG00000011679) #29 SLC9A2 (ENSPMRG00000011695) #30 MFSD9 (ENSPMRG00000011701) #31 TMEM182 (ENSPMRG00000011708) #32 ENSPMRG00000011710 POU3F3 (ENSPMRG00000011715) MRPS9 (ENSPMRG00000011720) #33 GPR45 (ENSPMRG00000011728) #34 TGFBRAP1 (ENSPMRG00000011732) #35 Argentine black and white tegu MODERN SPECIES AFF3 (ENSSMRG00000021518) LONRF2 (ENSSMRG00000021517) CHST10 (ENSSMRG00000021516) NMS (ENSSMRG00000021515) ENSSMRG00000021514 ENSSMRG00000021513 PDCL3 (ENSSMRG00000021512) NPAS2 (ENSSMRG00000021510) RPL31 (ENSSMRG00000021509) TBC1D8 (ENSSMRG00000021508) CNOT11 (ENSSMRG00000021506) #18 RNF149 (ENSSMRG00000021505) #19 CREG2 (ENSSMRG00000021504) #20 ENSSMRG00000021503 ENSSMRG00000021502 MAP4K4 (ENSSMRG00000004397) #22 IL1R2 (ENSSMRG00000004299) #23 IL1RL2 (ENSSMRG00000004295) #25 ENSSMRG00000004286 ENSSMRG00000004284 ENSSMRG00000004281 IL1RL1 (ENSSMRG00000004272) #26 IL18R1 (ENSSMRG00000004265) #27 IL18RAP (ENSSMRG00000004262) #28 SLC9A4 (ENSSMRG00000004192) #29 SLC9A2 (ENSSMRG00000003888) #30 MFSD9 (ENSSMRG00000003875) #31 TMEM182 (ENSSMRG00000003872) #32 ENSSMRG00000003868 ENSSMRG00000003862 POU3F3 (ENSSMRG00000003800) Toxicofera ANCESTRAL SPECIES 2 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b ENSGT00440000033329.b.a.a ENSGT01060000250476 ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000153118.eb.p ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT00940000161561.j ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Lizard MODERN SPECIES 857 ENSACAG00000041610 ENSACAG00000022216 ENSACAG00000045313 ENSACAG00000005929 ENSACAG00000039278 MAP4K4 (ENSACAG00000007525) #22 IL1R2 (ENSACAG00000007477) #23 ENSACAG00000007454 #25 ENSACAG00000036810 #25 IL1RL1 (ENSACAG00000007434) #26 IL18R1 (ENSACAG00000007402) #27 IL18RAP (ENSACAG00000007382) #28 SLC9A4 (ENSACAG00000044941) #29 SLC9A2 (ENSACAG00000007302) #30 MFSD9 (ENSACAG00000035485) #31 TMEM182 (ENSACAG00000007270) #32 ENSACAG00000008907 MRPS9 (ENSACAG00000011232) #33 Elapidae ANCESTRAL SPECIES 13 ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000153118.eb.p ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00950000183030.n ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT00940000161561.j.c.a.a.b.a ENSGT00940000161561.j.c.a.a.a ENSGT00940000161561.j.d.b ENSGT00940000176165 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a #25 ENSGT01090000259985.b.b.a.a #27 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 ENSGT00940000157728.b Indian cobra DUPLICATION Indian cobra MODERN SPECIES DHRS9 (ENSNNAG00000001151) LRP2 (ENSNNAG00000000806) ENSNNAG00000000731 BBS5 (ENSNNAG00000000718) KLHL41 (ENSNNAG00000000705) FASTKD1 (ENSNNAG00000000686) PPIG (ENSNNAG00000000669) ENSNNAG00000000633 PHOSPHO2 (ENSNNAG00000000607) ENSNNAG00000000591 ENSNNAG00000000581 SSB (ENSNNAG00000000557) METTL5 (ENSNNAG00000000537) UBR3 (ENSNNAG00000000375) ENSNNAG00000000265 ENSNNAG00000000259 #22 SP5 (ENSNNAG00000000243) ENSNNAG00000000580 GAD1 (ENSNNAG00000000447) GORASP2 (ENSNNAG00000000356) TLK1 (ENSNNAG00000000305) DCAF17 (ENSNNAG00000000257) CYBRD1 (ENSNNAG00000000231) DYNC1I2 (ENSNNAG00000000221) SLC25A12 (ENSNNAG00000000213) HAT1 (ENSNNAG00000000204) METAP1D (ENSNNAG00000000198) DLX1 (ENSNNAG00000000195) DLX2 (ENSNNAG00000000192) ENSNNAG00000000187 ITGA6 (ENSNNAG00000000157) Indian cobra MODERN SPECIES 5 AFF3 (ENSNNAG00000017584) LONRF2 (ENSNNAG00000017613) CHST10 (ENSNNAG00000017622) ENSNNAG00000017631 PDCL3 (ENSNNAG00000017634) NPAS2 (ENSNNAG00000017640) ENSNNAG00000017654 TBC1D8 (ENSNNAG00000017661) CNOT11 (ENSNNAG00000017670) #18 RNF149 (ENSNNAG00000017674) #19 CREG2 (ENSNNAG00000017679) #20 ENSNNAG00000017683 ENSNNAG00000017686 ENSNNAG00000007594 ENSNNAG00000007639 MAP4K4 (ENSNNAG00000007834) #22 IL1R2 (ENSNNAG00000008516) #23 IL1RL2 (ENSNNAG00000008536) #25 IL18R1 (ENSNNAG00000008612) #27 SLC9A4 (ENSNNAG00000008745) #29 SLC9A2 (ENSNNAG00000008769) #30 MFSD9 (ENSNNAG00000008786) #31 TMEM182 (ENSNNAG00000008821) #32 POU3F3 (ENSNNAG00000008862) MRPS9 (ENSNNAG00000008906) #33 GPR45 (ENSNNAG00000008932) #34 TGFBRAP1 (ENSNNAG00000008976) #35 C2orf49 (ENSNNAG00000009027) #36 FHL2 (ENSNNAG00000009043) #37 ENSNNAG00000009065 ENSNNAG00000009080 Elapidae_a ANCESTRAL SPECIES 16 ENSGT01060000250476 ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000153118.eb.p ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.n ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT00940000161561.j.c.a.a.b.a ENSGT00940000161561.j.c.a.a.a ENSGT00940000161561.j.d.b ENSGT00940000161561.j.d.a ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a #25 ENSGT01090000259985.b.b.a.a #27 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00690000102286.f.a ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Blue-lipped sea krait DUPLICATION Blue-lipped sea krait MODERN SPECIES 3420 ENSLLTG00000005102 #22 Blue-lipped sea krait MODERN SPECIES 2100 MAP4K4 (ENSLLTG00000002223) #22 Acanthophiinae ANCESTRAL SPECIES 21 ENSGT01060000250476 ENSGT00940000157128 ENSGT00940000153118.eb.p ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.n ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT00940000161561.j.c.a.a.b.a ENSGT00940000161561.j.c.b ENSGT00940000161561.j.c.a.a.a ENSGT00940000161561.j.d.b ENSGT00940000161561.j.d.a ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a #25 ENSGT01090000259985.b.b.a.a #27 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 ENSGT00940000157728.b Eastern brown snake MODERN SPECIES 35 CHST10 (ENSPTXG00000002152) ENSPTXG00000002156 PDCL3 (ENSPTXG00000002159) NPAS2 (ENSPTXG00000002163) RPL31 (ENSPTXG00000002170) TBC1D8 (ENSPTXG00000002176) CNOT11 (ENSPTXG00000002180) #18 RNF149 (ENSPTXG00000002185) #19 CREG2 (ENSPTXG00000002285) #20 ENSPTXG00000002288 ENSPTXG00000002476 ENSPTXG00000002479 ENSPTXG00000002484 ENSPTXG00000002488 ENSPTXG00000002494 MAP4K4 (ENSPTXG00000002557) #22 IL1R2 (ENSPTXG00000002664) #23 ENSPTXG00000002668 #25 IL18R1 (ENSPTXG00000002671) #27 SLC9A4 (ENSPTXG00000002675) #29 SLC9A2 (ENSPTXG00000002680) #30 MFSD9 (ENSPTXG00000002681) #31 TMEM182 (ENSPTXG00000002683) #32 ENSPTXG00000002686 POU3F3 (ENSPTXG00000002689) MRPS9 (ENSPTXG00000000120) #33 GPR45 (ENSPTXG00000000147) #34 TGFBRAP1 (ENSPTXG00000000171) #35 C2orf49 (ENSPTXG00000000186) #36 FHL2 (ENSPTXG00000000197) #37 NCK2 (ENSPTXG00000000209) Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 93 ENSNSUG00000014422 ENSNSUG00000014421 ENSNSUG00000014420 #22 SP5 (ENSNSUG00000014418) GAD1 (ENSNSUG00000014417) GORASP2 (ENSNSUG00000014415) TLK1 (ENSNSUG00000014390) DCAF17 (ENSNSUG00000014388) DYNC1I2 (ENSNSUG00000014387) SLC25A12 (ENSNSUG00000011883) HAT1 (ENSNSUG00000011801) METAP1D (ENSNSUG00000011800) DLX1 (ENSNSUG00000011798) DLX2 (ENSNSUG00000011797) ITGA6 (ENSNSUG00000011670) PDK1 (ENSNSUG00000011584) ENSNSUG00000011582 RAPGEF4 (ENSNSUG00000011574) Mainland tiger snake MODERN SPECIES 17 CHST10 (ENSNSUG00000002292) ENSNSUG00000002291 PDCL3 (ENSNSUG00000002289) NPAS2 (ENSNSUG00000002272) RPL31 (ENSNSUG00000002269) TBC1D8 (ENSNSUG00000002241) CNOT11 (ENSNSUG00000002227) #18 RNF149 (ENSNSUG00000002223) #19 CREG2 (ENSNSUG00000002222) #20 ENSNSUG00000002217 ENSNSUG00000002207 ENSNSUG00000002134 ENSNSUG00000002130 ENSNSUG00000002126 ENSNSUG00000002072 MAP4K4 (ENSNSUG00000002063) #22 IL1R2 (ENSNSUG00000002062) #23 ENSNSUG00000002059 #25 ENSNSUG00000002055 #25 ENSNSUG00000002053 SLC9A4 (ENSNSUG00000002050) #29 SLC9A2 (ENSNSUG00000002047) #30 ENSNSUG00000002046 TMEM182 (ENSNSUG00000002039) #32 POU3F3 (ENSNSUG00000002036) MRPS9 (ENSNSUG00000002032) #33 GPR45 (ENSNSUG00000002021) #34 TGFBRAP1 (ENSNSUG00000001631) #35 C2orf49 (ENSNSUG00000001628) #36 FHL2 (ENSNSUG00000001622) #37 NCK2 (ENSNSUG00000001620) tuatara DUPLICATION tuatara MODERN SPECIES 45 GPR158 (ENSSPUG00000015470) ENSSPUG00000015455 #22 ENSSPUG00000015445 APBB1IP (ENSSPUG00000015435) ENSSPUG00000015427 ENSSPUG00000015418 PDSS1 (ENSSPUG00000015388) ABI1 (ENSSPUG00000015366) tuatara MODERN SPECIES 1836 NPAS2 (ENSSPUG00000012100) ENSSPUG00000012136 TBC1D8 (ENSSPUG00000012165) CNOT11 (ENSSPUG00000012189) #18 RNF149 (ENSSPUG00000012226) #19 CREG2 (ENSSPUG00000012239) #20 MAP4K4 (ENSSPUG00000012368) #22 ENSSPUG00000012638 ENSSPUG00000012643 #25 Archelosauria ANCESTRAL SPECIES ENSGT00950000182974.a.a.a.b.p ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000173424 ENSGT01020000230360.c.b.b ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Cryptodira ANCESTRAL SPECIES ENSGT00950000182974.a.a.a.b.o.a ENSGT00950000182974.a.a.a.b.o.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000173424 ENSGT01020000230360.c.b.b ENSGT00940000153118.eb.k.a ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Chinese turtle MODERN SPECIES 1861 ENSPSIG00000007564 NPAS2 (ENSPSIG00000007391) ENSPSIG00000007165 TBC1D8 (ENSPSIG00000017478) CNOT11 (ENSPSIG00000017469) #18 ENSPSIG00000017466 #19 CREG2 (ENSPSIG00000017376) #20 RFX8 (ENSPSIG00000017366) #21 MAP4K4 (ENSPSIG00000017311) #22 IL1R2 (ENSPSIG00000017241) #23 ENSPSIG00000017235 #25 ENSPSIG00000017180 #25 ENSPSIG00000016859 #25 Testudinoidea ANCESTRAL SPECIES 1 ENSGT00950000182974.a.a.a.b.o.a ENSGT00950000182974.a.a.a.b.o.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000173424 ENSGT01020000230360.c.b.b.j ENSGT00940000153118.eb.k.a ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Emydidae ANCESTRAL SPECIES 30 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b.o.a ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000173424 ENSGT01020000230360.c.b.b.j ENSGT00940000153118.eb.k.a ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Three-toed box turtle MODERN SPECIES 4 EIF5B (ENSTMTG00000006054) REV1 (ENSTMTG00000005991) AFF3 (ENSTMTG00000005930) ENSTMTG00000005917 CHST10 (ENSTMTG00000005909) ENSTMTG00000005895 ENSTMTG00000005879 PDCL3 (ENSTMTG00000005841) NPAS2 (ENSTMTG00000005764) ENSTMTG00000005751 TBC1D8 (ENSTMTG00000005640) CNOT11 (ENSTMTG00000005602) #18 RNF149 (ENSTMTG00000005583) #19 CREG2 (ENSTMTG00000005561) #20 RFX8 (ENSTMTG00000005513) #21 MAP4K4 (ENSTMTG00000002893) #22 IL1R2 (ENSTMTG00000002738) #23 ENSTMTG00000002729 #25 ENSTMTG00000002722 #25 ENSTMTG00000002695 #25 IL1RL1 (ENSTMTG00000002654) #26 IL18R1 (ENSTMTG00000002635) #27 IL18RAP (ENSTMTG00000002624) #28 SLC9A2 (ENSTMTG00000002616) #30 SLC9A4 (ENSTMTG00000002595) #29 MFSD9 (ENSTMTG00000002584) #31 TMEM182 (ENSTMTG00000002575) #32 POU3F3 (ENSTMTG00000002570) MRPS9 (ENSTMTG00000002562) #33 GPR45 (ENSTMTG00000002558) #34 TGFBRAP1 (ENSTMTG00000002552) #35 painted turtle MODERN SPECIES 790 ENSCPBG00000026752 NCOA3 (ENSCPBG00000026751) SULF2 (ENSCPBG00000026750) PREX1 (ENSCPBG00000026747) ENSCPBG00000026746 ENSCPBG00000026744 CSE1L (ENSCPBG00000026743) STAU1 (ENSCPBG00000026741) ENSCPBG00000026736 ENSCPBG00000026728 KCNB1 (ENSCPBG00000026727) PTGIS (ENSCPBG00000026724) RNF149 (ENSCPBG00000026717) #19 CREG2 (ENSCPBG00000026715) #20 RFX8 (ENSCPBG00000026713) #21 MAP4K4 (ENSCPBG00000017157) #22 IL1R2 (ENSCPBG00000016743) #23 ENSCPBG00000016740 #25 ENSCPBG00000016735 #25 Testudinidae ANCESTRAL SPECIES ENSGT00940000156374 ENSGT00950000182974.a.a.a.b.o.a ENSGT00950000182974.a.a.a.b.o.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT01020000230360.c.b.b.j ENSGT01020000230360.c.b.b.i ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 Goode s thornscrub tortoise MODERN SPECIES REV1 (ENSGEVG00005019760) ENSGEVG00005019741 ENSGEVG00005019735 LONRF2 (ENSGEVG00005019700) CHST10 (ENSGEVG00005019675) ENSGEVG00005019668 ENSGEVG00005019664 PDCL3 (ENSGEVG00005019657) NPAS2 (ENSGEVG00005019641) ENSGEVG00005019628 TBC1D8 (ENSGEVG00005019501) CNOT11 (ENSGEVG00005019467) #18 RNF149 (ENSGEVG00005019452) #19 CREG2 (ENSGEVG00005019442) #20 RFX8 (ENSGEVG00005019435) #21 MAP4K4 (ENSGEVG00005019402) #22 ENSGEVG00005019381 IL1R2 (ENSGEVG00005019373) #23 ENSGEVG00005019358 #25 ENSGEVG00005019337 #25 ENSGEVG00005018984 #25 IL1RL1 (ENSGEVG00005018814) #26 IL18R1 (ENSGEVG00005018782) #27 IL18RAP (ENSGEVG00005018716) #28 SLC9A4 (ENSGEVG00005018665) #29 SLC9A2 (ENSGEVG00005018644) #30 MFSD9 (ENSGEVG00005018630) #31 TMEM182 (ENSGEVG00005018580) #32 POU3F3 (ENSGEVG00005018567) MRPS9 (ENSGEVG00005018553) #33 GPR45 (ENSGEVG00005018536) #34 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 1151 ENSCABG00000013132 #22 ENSCABG00000013128 GAD2 (ENSCABG00000013125) APBB1IP (ENSCABG00000013118) PDSS1 (ENSCABG00000013115) ABI1 (ENSCABG00000013111) ACBD5 (ENSCABG00000013110) MASTL (ENSCABG00000013102) YME1L1 (ENSCABG00000013084) ENSCABG00000013081 ENSCABG00000013079 ENSCABG00000013077 ENSCABG00000013062 Abingdon island giant tortoise MODERN SPECIES 1785 LONRF2 (ENSCABG00000005835) CHST10 (ENSCABG00000005837) ENSCABG00000005843 ENSCABG00000005845 PDCL3 (ENSCABG00000005848) NPAS2 (ENSCABG00000005851) ENSCABG00000005859 TBC1D8 (ENSCABG00000005863) CNOT11 (ENSCABG00000005930) #18 ENSCABG00000005936 #19 ENSCABG00000005937 #19 CREG2 (ENSCABG00000005942) #20 RFX8 (ENSCABG00000005945) #21 MAP4K4 (ENSCABG00000005995) #22 IL1R2 (ENSCABG00000007233) #23 ENSCABG00000007234 #25 ENSCABG00000007238 #25 ENSCABG00000007242 #25 IL1RL1 (ENSCABG00000007264) #26 IL18R1 (ENSCABG00000007283) #27 IL18RAP (ENSCABG00000007284) #28 Archosauria ANCESTRAL SPECIES 2 ENSGT00950000182974.a.a.a.b.o.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000173424 ENSGT01020000230360.c.b.b ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00950000183001.a.b.b #34 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 Australian saltwater crocodile MODERN SPECIES 27 ENSCPRG00005012170 ENSCPRG00005012217 LONRF2 (ENSCPRG00005012229) CHST10 (ENSCPRG00005012284) NMS (ENSCPRG00005012288) ENSCPRG00005012294 ENSCPRG00005012304 PDCL3 (ENSCPRG00005012308) NPAS2 (ENSCPRG00005012396) ENSCPRG00005012417 TBC1D8 (ENSCPRG00005012439) CNOT11 (ENSCPRG00005012538) #18 RNF149 (ENSCPRG00005012543) #19 CREG2 (ENSCPRG00005012548) #20 RFX8 (ENSCPRG00005012592) #21 MAP4K4 (ENSCPRG00005012996) #22 IL1R2 (ENSCPRG00005014328) #23 ENSCPRG00005014332 #25 ENSCPRG00005014345 #25 IL1RL1 (ENSCPRG00005014349) #26 IL18R1 (ENSCPRG00005014360) #27 IL18RAP (ENSCPRG00005014366) #28 SLC9A4 (ENSCPRG00005014401) #29 SLC9A2 (ENSCPRG00005014413) #30 MFSD9 (ENSCPRG00005014422) #31 TMEM182 (ENSCPRG00005014426) #32 POU3F3 (ENSCPRG00005014465) MRPS9 (ENSCPRG00005014477) #33 GPR45 (ENSCPRG00005014486) #34 TGFBRAP1 (ENSCPRG00005014490) #35 C2orf49 (ENSCPRG00005014517) #36 Aves ANCESTRAL SPECIES ENSGT00950000182974.a.a.a.b.p ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000173424 ENSGT01020000230360.c.b.b ENSGT00510000049213 ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 African ostrich MODERN SPECIES 318 AFF3 (ENSSCUG00000003083) ENSSCUG00000003081 LONRF2 (ENSSCUG00000003077) CHST10 (ENSSCUG00000003076) ENSSCUG00000003073 ENSSCUG00000003072 ENSSCUG00000003070 PDCL3 (ENSSCUG00000003067) NPAS2 (ENSSCUG00000003060) ENSSCUG00000003056 TBC1D8 (ENSSCUG00000003052) CNOT11 (ENSSCUG00000003045) #18 RNF149 (ENSSCUG00000003038) #19 CREG2 (ENSSCUG00000003034) #20 RFX8 (ENSSCUG00000003032) #21 MAP4K4 (ENSSCUG00000002914) #22 IL1R2 (ENSSCUG00000002791) #23 ENSSCUG00000002788 #25 ENSSCUG00000002784 #25 IL1RL1 (ENSSCUG00000002777) #26 IL18R1 (ENSSCUG00000002775) #27 IL18RAP (ENSSCUG00000002774) #28 SLC9A4 (ENSSCUG00000002772) #29 SLC9A2 (ENSSCUG00000002771) #30 MFSD9 (ENSSCUG00000002768) #31 TMEM182 (ENSSCUG00000002767) #32 Neognathae ANCESTRAL SPECIES 1 ENSGT00950000182974.a.a.a.b.p ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000173424 ENSGT01020000230360.c.b.b ENSGT00510000049213 ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Neognathae_b ANCESTRAL SPECIES ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b.p ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.n ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Neognathae_c ANCESTRAL SPECIES 4 ENSGT00390000015645 ENSGT00940000162583 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b.p ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000173424 ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.n ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Golden eagle MODERN SPECIES 15 EIF5B (ENSACCG00020014990) REV1 (ENSACCG00020014922) AFF3 (ENSACCG00020014878) LONRF2 (ENSACCG00020014815) CHST10 (ENSACCG00020014786) ENSACCG00020014770 ENSACCG00020014759 ENSACCG00020014747 PDCL3 (ENSACCG00020014738) NPAS2 (ENSACCG00020014671) RPL31 (ENSACCG00020014618) TBC1D8 (ENSACCG00020014602) CNOT11 (ENSACCG00020014589) #18 RNF149 (ENSACCG00020014559) #19 CREG2 (ENSACCG00020014528) #20 MAP4K4 (ENSACCG00020013968) #22 IL1R2 (ENSACCG00020013070) #23 ENSACCG00020013043 #25 ENSACCG00020012995 #25 IL1RL1 (ENSACCG00020012880) #26 ENSACCG00020012807 #28 SLC9A4 (ENSACCG00020012747) #29 SLC9A2 (ENSACCG00020012679) #30 MFSD9 (ENSACCG00020012636) #31 TMEM182 (ENSACCG00020012614) #32 POU3F3 (ENSACCG00020012571) MRPS9 (ENSACCG00020012558) #33 TGFBRAP1 (ENSACCG00020012525) #35 C2orf49 (ENSACCG00020012508) #36 FHL2 (ENSACCG00020012491) #37 NCK2 (ENSACCG00020012472) Kakapo MODERN SPECIES 11 EIF5B (ENSSHBG00005014392) REV1 (ENSSHBG00005014409) AFF3 (ENSSHBG00005014423) LONRF2 (ENSSHBG00005014441) CHST10 (ENSSHBG00005014448) ENSSHBG00005014454 ENSSHBG00005014462 ENSSHBG00005014470 PDCL3 (ENSSHBG00005014477) NPAS2 (ENSSHBG00005014504) RPL31 (ENSSHBG00005014532) TBC1D8 (ENSSHBG00005014556) CNOT11 (ENSSHBG00005014577) #18 RNF149 (ENSSHBG00005014582) #19 CREG2 (ENSSHBG00005014596) #20 MAP4K4 (ENSSHBG00005014609) #22 IL1R2 (ENSSHBG00005014627) #23 ENSSHBG00005014636 #25 ENSSHBG00005014645 #26 ENSSHBG00005000025 #25 IL18R1 (ENSSHBG00005000053) #27 IL18RAP (ENSSHBG00005000071) #28 SLC9A4 (ENSSHBG00005000088) #29 SLC9A2 (ENSSHBG00005000107) #30 MFSD9 (ENSSHBG00005000130) #31 TMEM182 (ENSSHBG00005001916) #32 ENSSHBG00005001965 MRPS9 (ENSSHBG00005002086) #33 TGFBRAP1 (ENSSHBG00005002115) #35 C2orf49 (ENSSHBG00005002142) #36 FHL2 (ENSSHBG00005002161) #37 Passeriformes ANCESTRAL SPECIES 1 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b.p ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000173424 ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.n ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Great tit DUPLICATION Great tit MODERN SPECIES 11 MLLT10 (ENSPMJG00000006467) DNAJC1 (ENSPMJG00000006417) COMMD3 (ENSPMJG00000006415) BMI1 (ENSPMJG00000006411) SPAG6 (ENSPMJG00000006367) PIP4K2A (ENSPMJG00000006363) ARMC3 (ENSPMJG00000006350) ENSPMJG00000006339 ENSPMJG00000006336 PTF1A (ENSPMJG00000006333) KIAA1217 (ENSPMJG00000006299) ARHGAP21 (ENSPMJG00000006247) PRTFDC1 (ENSPMJG00000006243) ENKUR (ENSPMJG00000006240) GPR158 (ENSPMJG00000006235) ENSPMJG00000006210 #22 ENSPMJG00000006207 ENSPMJG00000006200 GAD2 (ENSPMJG00000006196) APBB1IP (ENSPMJG00000006178) ENSPMJG00000006177 PDSS1 (ENSPMJG00000006176) ABI1 (ENSPMJG00000006173) ACBD5 (ENSPMJG00000006169) MASTL (ENSPMJG00000006160) YME1L1 (ENSPMJG00000006156) PTCHD3 (ENSPMJG00000006153) ENSPMJG00000006151 RAB18 (ENSPMJG00000006149) MKX (ENSPMJG00000006148) ODAD2 (ENSPMJG00000006117) Great tit MODERN SPECIES EIF5B (ENSPMJG00000015232) REV1 (ENSPMJG00000015231) AFF3 (ENSPMJG00000015197) LONRF2 (ENSPMJG00000015196) CHST10 (ENSPMJG00000015195) ENSPMJG00000015194 ENSPMJG00000015193 PDCL3 (ENSPMJG00000015192) NPAS2 (ENSPMJG00000015190) ENSPMJG00000015189 TBC1D8 (ENSPMJG00000015188) CNOT11 (ENSPMJG00000015187) #18 RNF149 (ENSPMJG00000015185) #19 CREG2 (ENSPMJG00000015184) #20 RFX8 (ENSPMJG00000015183) #21 MAP4K4 (ENSPMJG00000011672) #22 IL1R2 (ENSPMJG00000011670) #23 ENSPMJG00000011669 #25 ENSPMJG00000011668 #25 IL1RL1 (ENSPMJG00000011667) #26 IL18R1 (ENSPMJG00000011666) #27 IL18RAP (ENSPMJG00000011665) #28 SLC9A4 (ENSPMJG00000011664) #29 SLC9A2 (ENSPMJG00000011663) #30 MFSD9 (ENSPMJG00000011662) #31 TMEM182 (ENSPMJG00000011661) #32 POU3F3 (ENSPMJG00000011644) MRPS9 (ENSPMJG00000011637) #33 TGFBRAP1 (ENSPMJG00000011633) #35 C2orf49 (ENSPMJG00000011632) #36 FHL2 (ENSPMJG00000011631) #37 Passeriformes_d ANCESTRAL SPECIES 1 ENSGT00950000182974.a.a.a.b.p ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000173424 ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744.c.a ENSGT00940000160744.c.b ENSGT00950000183030.n ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Flycatcher MODERN SPECIES ENSFALG00000003920 REV1 (ENSFALG00000003890) AFF3 (ENSFALG00000003878) LONRF2 (ENSFALG00000003868) CHST10 (ENSFALG00000003864) NMS (ENSFALG00000028879) ENSFALG00000014993 PDCL3 (ENSFALG00000025457) NPAS2 (ENSFALG00000003827) RPL31 (ENSFALG00000003814) TBC1D8 (ENSFALG00000003811) CNOT11 (ENSFALG00000003802) #18 RNF149 (ENSFALG00000003793) #19 CREG2 (ENSFALG00000027514) #20 RFX8 (ENSFALG00000003782) #21 MAP4K4 (ENSFALG00000003751) #22 IL1R2 (ENSFALG00000003723) #23 ENSFALG00000003716 #25 ENSFALG00000003707 #25 IL1RL1 (ENSFALG00000003700) #26 IL18R1 (ENSFALG00000003692) #27 IL18RAP (ENSFALG00000003687) #28 SLC9A4 (ENSFALG00000003679) #29 SLC9A2 (ENSFALG00000003673) #30 MFSD9 (ENSFALG00000026417) #31 ENSFALG00000022898 TMEM182 (ENSFALG00000003665) #32 POU3F3 (ENSFALG00000022153) MRPS9 (ENSFALG00000003647) #33 TGFBRAP1 (ENSFALG00000027743) #35 C2orf49 (ENSFALG00000025508) #36 Passeriformes_g ANCESTRAL SPECIES 2 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b.p ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000173424 ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744.c.a ENSGT00940000160744.c.b ENSGT00950000183030.n ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Medium ground finch MODERN SPECIES 18 TXNDC9 (ENSGFOG00000008919) ENSGFOG00000008749 REV1 (ENSGFOG00000008714) AFF3 (ENSGFOG00000008681) LONRF2 (ENSGFOG00000008664) CHST10 (ENSGFOG00000008655) ENSGFOG00000008650 ENSGFOG00000008644 PDCL3 (ENSGFOG00000008641) NPAS2 (ENSGFOG00000008612) RPL31 (ENSGFOG00000008600) TBC1D8 (ENSGFOG00000008530) CNOT11 (ENSGFOG00000008515) #18 RNF149 (ENSGFOG00000008490) #19 CREG2 (ENSGFOG00000008482) #20 MAP4K4 (ENSGFOG00000005921) #22 IL1R2 (ENSGFOG00000005829) #23 ENSGFOG00000005824 #25 ENSGFOG00000005818 #25 ENSGFOG00000005814 #26 IL18R1 (ENSGFOG00000005801) #27 IL18RAP (ENSGFOG00000005783) #28 SLC9A4 (ENSGFOG00000005743) #29 SLC9A2 (ENSGFOG00000005732) #30 MFSD9 (ENSGFOG00000005723) #31 TMEM182 (ENSGFOG00000005717) #32 POU3F3 (ENSGFOG00000005711) MRPS9 (ENSGFOG00000005700) #33 TGFBRAP1 (ENSGFOG00000005692) #35 C2orf49 (ENSGFOG00000005686) #36 FHL2 (ENSGFOG00000005677) #37 Passeroidea ANCESTRAL SPECIES 10 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b.p ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000173424 ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744.c.a ENSGT00940000160744.c.b ENSGT00950000183030.n ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000164385.a.a.a.b ENSGT00390000011204 #33 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Zebra finch MODERN SPECIES REV1 (ENSTGUG00000010082) AFF3 (ENSTGUG00000010075) LONRF2 (ENSTGUG00000010057) CHST10 (ENSTGUG00000010047) ENSTGUG00000010044 ENSTGUG00000010042 PDCL3 (ENSTGUG00000010036) ENSTGUG00000010003 ENSTGUG00000023169 RPL31 (ENSTGUG00000027560) TBC1D8 (ENSTGUG00000009966) CNOT11 (ENSTGUG00000009952) #18 RNF149 (ENSTGUG00000009945) #19 CREG2 (ENSTGUG00000020072) #20 RFX8 (ENSTGUG00000018334) #21 MAP4K4 (ENSTGUG00000009900) #22 IL1R2 (ENSTGUG00000009893) #23 ENSTGUG00000009881 #25 ENSTGUG00000018199 #25 IL1RL1 (ENSTGUG00000009867) #26 IL18R1 (ENSTGUG00000025203) #27 IL18RAP (ENSTGUG00000009856) #28 SLC9A4 (ENSTGUG00000009828) #29 SLC9A2 (ENSTGUG00000009816) #30 MFSD9 (ENSTGUG00000019446) #31 TMEM182 (ENSTGUG00000026318) #32 ENSTGUG00000024352 MRPS9 (ENSTGUG00000009773) #33 TGFBRAP1 (ENSTGUG00000009752) #35 C2orf49 (ENSTGUG00000009750) #36 FHL2 (ENSTGUG00000009735) #37 Common canary DUPLICATION Common canary MODERN SPECIES 5 NEBL (ENSSCAG00000010164) MLLT10 (ENSSCAG00000010116) DNAJC1 (ENSSCAG00000010104) COMMD3 (ENSSCAG00000010098) BMI1 (ENSSCAG00000010095) SPAG6 (ENSSCAG00000010084) PIP4K2A (ENSSCAG00000010076) ARMC3 (ENSSCAG00000010054) ENSSCAG00000010037 PTF1A (ENSSCAG00000010034) KIAA1217 (ENSSCAG00000009958) ARHGAP21 (ENSSCAG00000009927) PRTFDC1 (ENSSCAG00000009917) ENKUR (ENSSCAG00000009912) GPR158 (ENSSCAG00000009867) ENSSCAG00000009855 #22 ENSSCAG00000009851 GAD2 (ENSSCAG00000009663) APBB1IP (ENSSCAG00000009623) ENSSCAG00000009617 PDSS1 (ENSSCAG00000009611) ABI1 (ENSSCAG00000009593) ACBD5 (ENSSCAG00000009560) MASTL (ENSSCAG00000009550) YME1L1 (ENSSCAG00000009065) PTCHD3 (ENSSCAG00000008993) RAB18 (ENSSCAG00000008984) MKX (ENSSCAG00000008967) ODAD2 (ENSSCAG00000008955) MPP7 (ENSSCAG00000008935) ENSSCAG00000008921 Common canary MODERN SPECIES 4 TXNDC9 (ENSSCAG00000016791) EIF5B (ENSSCAG00000016792) REV1 (ENSSCAG00000016796) AFF3 (ENSSCAG00000016803) LONRF2 (ENSSCAG00000016807) CHST10 (ENSSCAG00000000003) ENSSCAG00000000005 ENSSCAG00000000007 PDCL3 (ENSSCAG00000000010) NPAS2 (ENSSCAG00000000024) RPL31 (ENSSCAG00000000039) TBC1D8 (ENSSCAG00000000065) CNOT11 (ENSSCAG00000000117) #18 RNF149 (ENSSCAG00000000141) #19 CREG2 (ENSSCAG00000000195) #20 MAP4K4 (ENSSCAG00000000828) #22 IL1R2 (ENSSCAG00000002842) #23 ENSSCAG00000002854 #25 ENSSCAG00000002870 #25 IL1RL1 (ENSSCAG00000002888) #26 IL18R1 (ENSSCAG00000002905) #27 IL18RAP (ENSSCAG00000002913) #28 SLC9A4 (ENSSCAG00000002935) #29 SLC9A2 (ENSSCAG00000003029) #30 MFSD9 (ENSSCAG00000003073) #31 TMEM182 (ENSSCAG00000003084) #32 ENSSCAG00000003113 MRPS9 (ENSSCAG00000003137) #33 TGFBRAP1 (ENSSCAG00000003147) #35 C2orf49 (ENSSCAG00000003150) #36 FHL2 (ENSSCAG00000003155) #37 Galloanserae ANCESTRAL SPECIES 1 ENSGT00950000182974.a.a.a.b.p ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000173424 ENSGT01020000230360.c.b.b ENSGT00510000049213 ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Anatidae ANCESTRAL SPECIES 32 ENSGT00940000156374 ENSGT00950000182974.a.a.a.b.p ENSGT00950000182974.a.a.a.b.o.b ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000173424 ENSGT00940000153118.eb ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Pink-footed goose DUPLICATION Pink-footed goose MODERN SPECIES 30 DNAJC1 (ENSABRG00000003814) COMMD3 (ENSABRG00000003796) BMI1 (ENSABRG00000003771) SPAG6 (ENSABRG00000003755) PIP4K2A (ENSABRG00000003650) ARMC3 (ENSABRG00000003474) ENSABRG00000003435 PTF1A (ENSABRG00000003424) OTUD1 (ENSABRG00000003412) KIAA1217 (ENSABRG00000003179) ARHGAP21 (ENSABRG00000002966) PRTFDC1 (ENSABRG00000002915) ENKUR (ENSABRG00000002896) THNSL1 (ENSABRG00000002890) GPR158 (ENSABRG00000002847) ENSABRG00000002812 #22 MYO3A (ENSABRG00000002738) GAD2 (ENSABRG00000002721) APBB1IP (ENSABRG00000002650) ENSABRG00000002591 PDSS1 (ENSABRG00000002561) ABI1 (ENSABRG00000002544) ACBD5 (ENSABRG00000002497) MASTL (ENSABRG00000002394) YME1L1 (ENSABRG00000002314) PTCHD3 (ENSABRG00000002304) ENSABRG00000002281 ENSABRG00000002254 MKX (ENSABRG00000002222) ODAD2 (ENSABRG00000002137) MPP7 (ENSABRG00000001975) Pink-footed goose MODERN SPECIES 101 ENSABRG00000011219 CHST10 (ENSABRG00000011225) ENSABRG00000011241 ENSABRG00000011246 ENSABRG00000011249 ENSABRG00000011257 PDCL3 (ENSABRG00000011268) NPAS2 (ENSABRG00000011287) ENSABRG00000011308 TBC1D8 (ENSABRG00000011315) CNOT11 (ENSABRG00000011324) #18 RNF149 (ENSABRG00000011357) #19 CREG2 (ENSABRG00000011364) #20 RFX8 (ENSABRG00000011370) #21 MAP4K4 (ENSABRG00000011749) #22 IL1R2 (ENSABRG00000017336) #23 ENSABRG00000017341 #25 ENSABRG00000017353 #25 IL1RL1 (ENSABRG00000017359) #26 IL18R1 (ENSABRG00000017363) #27 IL18RAP (ENSABRG00000017366) #28 SLC9A4 (ENSABRG00000017375) #29 SLC9A2 (ENSABRG00000017390) #30 MFSD9 (ENSABRG00000017397) #31 TMEM182 (ENSABRG00000017401) #32 POU3F3 (ENSABRG00000017444) MRPS9 (ENSABRG00000017449) #33 TGFBRAP1 (ENSABRG00000017455) #35 C2orf49 (ENSABRG00000017459) #36 FHL2 (ENSABRG00000017461) #37 Duck DUPLICATION Duck MODERN SPECIES 10 DNAJC1 (ENSAPLG00000016264) BMI1 (ENSAPLG00000022525) SPAG6 (ENSAPLG00000013595) PIP4K2A (ENSAPLG00000004521) ENSAPLG00000026560 ARMC3 (ENSAPLG00000005071) PTF1A (ENSAPLG00000022813) ENSAPLG00000022206 OTUD1 (ENSAPLG00000026401) KIAA1217 (ENSAPLG00000007810) ARHGAP21 (ENSAPLG00000008113) PRTFDC1 (ENSAPLG00000009020) ENKUR (ENSAPLG00000009270) THNSL1 (ENSAPLG00000001860) GPR158 (ENSAPLG00000005836) ENSAPLG00000030844 #22 MYO3A (ENSAPLG00000005895) GAD2 (ENSAPLG00000007020) APBB1IP (ENSAPLG00000011179) ENSAPLG00000023737 PDSS1 (ENSAPLG00000011581) ABI1 (ENSAPLG00000011841) ENSAPLG00000022501 ACBD5 (ENSAPLG00000012250) MASTL (ENSAPLG00000012632) YME1L1 (ENSAPLG00000012942) PTCHD3 (ENSAPLG00000013648) ENSAPLG00000029634 MKX (ENSAPLG00000010674) ODAD2 (ENSAPLG00000010322) MPP7 (ENSAPLG00000009795) Duck MODERN SPECIES TGDS (ENSAPLG00000013769) GPR180 (ENSAPLG00000013588) ABCC4 (ENSAPLG00000012227) CLDN10 (ENSAPLG00000012191) DZIP1 (ENSAPLG00000011935) DNAJC3 (ENSAPLG00000011218) UGGT2 (ENSAPLG00000011310) ENSAPLG00000018066 NPAS2 (ENSAPLG00000016315) ENSAPLG00000016431 TBC1D8 (ENSAPLG00000000969) CNOT11 (ENSAPLG00000002957) #18 RNF149 (ENSAPLG00000003131) #19 CREG2 (ENSAPLG00000026852) #20 RFX8 (ENSAPLG00000022405) #21 MAP4K4 (ENSAPLG00000003218) #22 IL1R2 (ENSAPLG00000004200) #23 ENSAPLG00000004478 #25 ENSAPLG00000004717 #25 IL1RL1 (ENSAPLG00000004919) #26 IL18RAP (ENSAPLG00000005272) #28 SLC9A4 (ENSAPLG00000005368) #29 SLC9A2 (ENSAPLG00000005438) #30 MFSD9 (ENSAPLG00000005908) #31 TMEM182 (ENSAPLG00000028840) #32 MRPS9 (ENSAPLG00000013899) #33 ENSAPLG00000025148 #35 ENSAPLG00000011760 #35 C2orf49 (ENSAPLG00000013546) #36 FHL2 (ENSAPLG00000013513) #37 NCK2 (ENSAPLG00000013494) Phasianidae ANCESTRAL SPECIES ENSGT00940000156374 ENSGT00950000182974.a.a.a.b.p ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00510000049213 ENSGT00940000153118.eb.g.b ENSGT00940000153118.eb.g.a ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Japanese quail MODERN SPECIES REV1 (ENSCJPG00005001170) AFF3 (ENSCJPG00005001212) LONRF2 (ENSCJPG00005001247) CHST10 (ENSCJPG00005001255) NMS (ENSCJPG00005001260) ENSCJPG00005001264 ENSCJPG00005001267 PDCL3 (ENSCJPG00005001272) NPAS2 (ENSCJPG00005001288) ENSCJPG00005001293 TBC1D8 (ENSCJPG00005001297) CNOT11 (ENSCJPG00005001306) #18 RNF149 (ENSCJPG00005001315) #19 CREG2 (ENSCJPG00005001319) #20 RFX8 (ENSCJPG00005001327) #21 MAP4K4 (ENSCJPG00005002274) #22 IL1R2 (ENSCJPG00005013202) #23 ENSCJPG00005013203 #25 ENSCJPG00005013204 #25 IL1RL1 (ENSCJPG00005013205) #26 IL18R1 (ENSCJPG00005013206) #27 ENSCJPG00005013207 #28 SLC9A4 (ENSCJPG00005013209) #29 ENSCJPG00005013210 #30 ENSCJPG00005013211 #30 MFSD9 (ENSCJPG00005013212) #31 TMEM182 (ENSCJPG00005013213) #32 POU3F3 (ENSCJPG00005013222) MRPS9 (ENSCJPG00005013224) #33 TGFBRAP1 (ENSCJPG00005013225) #35 C2orf49 (ENSCJPG00005013226) #36 Phasianidae_b ANCESTRAL SPECIES ENSGT00940000156374 ENSGT00950000182974.a.a.a.b.p ENSGT00440000033329.b.a.a ENSGT00940000157128 ENSGT00940000173424 ENSGT01020000230360.c.b.b ENSGT00940000153118.eb.g.a ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030.m.a.a.a.b ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT01050000244879.b.a.a #21 ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT01090000259985.b.a.b.a.a.b #25 ENSGT01090000259985.b.a.b.a.a.a.a #25 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000259985.b.b.a.a #27 ENSGT01090000259985.b.b.a.b #28 ENSGT00940000160774 #29 ENSGT00940000156807 #30 ENSGT00940000159390 #31 ENSGT00390000017581.b #32 ENSGT00940000163665 ENSGT00390000011204 #33 ENSGT00530000063596.A #35 ENSGT00390000007488 #36 ENSGT00950000183028.a.a.a #37 Chicken MODERN SPECIES REV1 (ENSGALG00010015877) AFF3 (ENSGALG00010015886) LONRF2 (ENSGALG00010015896) CHST10 (ENSGALG00010015913) NMS (ENSGALG00010015933) ENSGALG00010015949 ENSGALG00010015977 PDCL3 (ENSGALG00010015984) NPAS2 (ENSGALG00010013436) RPL31 (ENSGALG00010013470) TBC1D8 (ENSGALG00010013480) CNOT11 (ENSGALG00010013491) #18 RNF149 (ENSGALG00010013506) #19 CREG2 (ENSGALG00010013520) #20 RFX8 (ENSGALG00010013525) #21 MAP4K4 (ENSGALG00010013582) #22 IL1R2 (ENSGALG00010013619) #23 IL1R1 (ENSGALG00010013715) #25 ENSGALG00010013744 #25 IL1RL1 (ENSGALG00010013797) #26 IL18R1 (ENSGALG00010013836) #27 IL18RAP (ENSGALG00010013857) #28 SLC9A4 (ENSGALG00010013886) #29 SLC9A2 (ENSGALG00010012976) #30 MFSD9 (ENSGALG00010012991) #31 TMEM182 (ENSGALG00010013012) #32 POU3F3 (ENSGALG00010013125) MRPS9 (ENSGALG00010013196) #33 TGFBRAP1 (ENSGALG00010013217) #35 C2orf49 (ENSGALG00010013221) #36 FHL2 (ENSGALG00010013232) #37 Turkey DUPLICATION Turkey MODERN SPECIES 26 ENSMGAG00000021839 ENSMGAG00000018816 ENSMGAG00000006697 ENSMGAG00000006734 ENSMGAG00000006754 ENSMGAG00000020351 ENSMGAG00000006774 ENSMGAG00000017657 ENSMGAG00000022786 ENSMGAG00000006830 ENSMGAG00000020132 ENSMGAG00000006849 ENSMGAG00000018940 ENSMGAG00000006891 ENSMGAG00000006952 ENSMGAG00000020760 #22 ENSMGAG00000018476 ENSMGAG00000007021 ENSMGAG00000016013 ENSMGAG00000007062 PRTFDC1 (ENSMGAG00000007067) ENSMGAG00000007174 ENSMGAG00000007092 ADARB2 (ENSMGAG00000005556) WDR37 (ENSMGAG00000005536) ENSMGAG00000005526 GTPBP4 (ENSMGAG00000016591) LARP4B (ENSMGAG00000005472) DIP2C (ENSMGAG00000005375) ZMYND11 (ENSMGAG00000005311) VIPR2 (ENSMGAG00000005280) Turkey MODERN SPECIES 27 ENSMGAG00000010053 ENSMGAG00000010060 ENSMGAG00000021955 ENSMGAG00000019846 ENSMGAG00000010108 ENSMGAG00000010120 ENSMGAG00000021808 ENSMGAG00000010229 GORASP2 (ENSMGAG00000010179) ENSMGAG00000010185 ENSMGAG00000021598 ENSMGAG00000010160 ENSMGAG00000017602 ENSMGAG00000010257 ENSMGAG00000017530 ENSMGAG00000018486 #22 ENSMGAG00000019209 ENSMGAG00000010306 SSB (ENSMGAG00000010328) METTL5 (ENSMGAG00000010312) ENSMGAG00000015907 ENSMGAG00000010354 ENSMGAG00000018582 ENSMGAG00000010359 ENSMGAG00000010373 ENSMGAG00000021055 ENSMGAG00000010393 ENSMGAG00000019714 ENSMGAG00000010449 ENSMGAG00000010423 LRP2 (ENSMGAG00000010459) Turkey MODERN SPECIES UNC50 (ENSMGAG00000020765) MGAT4A (ENSMGAG00000014782) CRACDL (ENSMGAG00000014783) PDCL3 (ENSMGAG00000014798) TSGA10 (ENSMGAG00000014784) ENSMGAG00000021378 ENSMGAG00000015501 ENSMGAG00000015504 NPAS2 (ENSMGAG00000014799) ENSMGAG00000014800 TBC1D8 (ENSMGAG00000014801) CNOT11 (ENSMGAG00000014802) #18 RNF149 (ENSMGAG00000014803) #19 CREG2 (ENSMGAG00000014804) #20 RFX8 (ENSMGAG00000014805) #21 MAP4K4 (ENSMGAG00000014806) #22 IL1R2 (ENSMGAG00000014807) #23 IL1RL2 (ENSMGAG00000014809) #25 IL1RL1 (ENSMGAG00000014810) #26 IL18R1 (ENSMGAG00000014811) #27 IL18RAP (ENSMGAG00000014812) #28 SLC9A4 (ENSMGAG00000014813) #29 SLC9A2 (ENSMGAG00000016705) #30 MFSD9 (ENSMGAG00000014814) #31 TMEM182 (ENSMGAG00000014815) #32 MRPS9 (ENSMGAG00000014818) #33 TGFBRAP1 (ENSMGAG00000014819) #35 C2orf49 (ENSMGAG00000014820) #36 FHL2 (ENSMGAG00000014821) #37 NCK2 (ENSMGAG00000014822) ECRG4 (ENSMGAG00000014823) Anura ANCESTRAL SPECIES 23 ENSGT00940000158714 ENSGT01100000263502.A.a.a.a.b ENSGT00940000157868 ENSGT00390000000145 ENSGT01100000263996 ENSGT00940000157728.b ENSGT00940000157128 ENSGT00940000173424 ENSGT00940000154295 ENSGT00940000160744 ENSGT00950000183030 ENSGT00940000158977 ENSGT00390000006356 #18 ENSGT00940000161020 #19 ENSGT00390000005914.b #20 ENSGT00940000155063 #22 Frog MODERN SPECIES 2 ecrg4 (ENSXETG00000021670) ENSXETG00000037291 nck2 (ENSXETG00000021669) chst10 (ENSXETG00000013820) ENSXETG00000038428 pdcl3 (ENSXETG00000046224) npas2 (ENSXETG00000021769) rpl31 (ENSXETG00000024667) ENSXETG00000041148 ENSXETG00000041170 tbc1d8 (ENSXETG00000004999) cnot11 (ENSXETG00000033799) #18 rnf149 (ENSXETG00000004960) #19 ENSXETG00000047625 creg2 (ENSXETG00000030769) #20 map4k4 (ENSXETG00000031965) #22 ENSXETG00000043197 il1r1 (ENSXETG00000040858) #25 il1r2 (ENSXETG00000004981) #23 il18r1.1 (ENSXETG00000041012) #27 ENSXETG00000049325 #27 il18rap (ENSXETG00000031567) #28 slc9a4 (ENSXETG00000033166) #29 slc9a2 (ENSXETG00000040616) #30 mfsd9 (ENSXETG00000038450) #31 tmem182 (ENSXETG00000030826) #32 ENSXETG00000045238 mrps9 (ENSXETG00000002583) #33 gpr45 (ENSXETG00000002582) #34 tgfbrap1 (ENSXETG00000002581) #35 c2orf49 (ENSXETG00000002578) #36 Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000006858 NCK2 (ENSLLEG00000006868) ENSLLEG00000006904 CHST10 (ENSLLEG00000006921) ENSLLEG00000006982 PDCL3 (ENSLLEG00000007127) NPAS2 (ENSLLEG00000007230) ENSLLEG00000007552 CREG2 (ENSLLEG00000007562) #20 RNF149 (ENSLLEG00000007590) #19 CNOT11 (ENSLLEG00000007670) #18 TBC1D8 (ENSLLEG00000007928) ENSLLEG00000008168 ENSLLEG00000008185 ENSLLEG00000008290 MAP4K4 (ENSLLEG00000008454) #22 ENSLLEG00000011044 ENSLLEG00000011071 IL1R2 (ENSLLEG00000011166) #23 ENSLLEG00000011319 IL1RL2 (ENSLLEG00000011375) #25 ENSLLEG00000011566 ENSLLEG00000011587 ##23 ENSLLEG00000011723 #27 ENSLLEG00000011832 #27 IL18RAP (ENSLLEG00000011866) #28 SLC9A4 (ENSLLEG00000011943) #29 ENSLLEG00000012044 SLC9A2 (ENSLLEG00000012057) #30 MFSD9 (ENSLLEG00000012150) #31 TMEM182 (ENSLLEG00000012243) #32 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 623 LRP2 (ENSLACG00000003665) zgc:172182 (ENSLACG00000009024) ATP5F1B (ENSLACG00000009340) col28a2a (ENSLACG00000010691) BBS5 (ENSLACG00000012032) KLHL41 (ENSLACG00000012209) FASTKD1 (ENSLACG00000012404) PPIG (ENSLACG00000012802) ENSLACG00000013309 PHOSPHO2 (ENSLACG00000013712) PHGDH (ENSLACG00000013783) KLHL23 (ENSLACG00000013981) SSB (ENSLACG00000014056) METTL5 (ENSLACG00000014156) UBR3 (ENSLACG00000014244) ENSLACG00000015741 #22 Coelacanth MODERN SPECIES 1082 RPL31 (ENSLACG00000013603) TBC1D8 (ENSLACG00000013124) CNOT11 (ENSLACG00000012383) #18 RNF149 (ENSLACG00000011858) #19 CREG2 (ENSLACG00000011599) #20 RFX8 (ENSLACG00000022645) #21 MAP4K4 (ENSLACG00000006775) #22 IL1R2 (ENSLACG00000005325) #23 ENSLACG00000005158 ENSLACG00000003785 ENSLACG00000003183 ENSLACG00000001917 ##23 Actinopterygii ANCESTRAL SPECIES ENSGT00550000074800.a.a ENSGT00550000074800.a.b ENSGT00940000163195.B ENSGT01090000260278 ENSGT00390000002753 ENSGT00940000158859 ENSGT01030000234607.B ENSGT00940000157954 ENSGT00940000165303 ENSGT00390000007741.b ENSGT00940000155863 ENSGT00940000159106 ENSGT00830000128380 ENSGT00390000000227 ENSGT00950000183075.a.b ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00940000159309 ENSGT00940000160673 ENSGT00390000017846 ENSGT00940000155526 ENSGT00390000008686.d ENSGT00950000182984.b.a.b ENSGT00940000159683 ENSGT00390000012728 ENSGT00950000183197.b.b ENSGT00940000155442 ENSGT00940000155963 ENSGT00900000142763 ENSGT00390000007069 ENSGT00940000157735 Reedfish MODERN SPECIES 12 mphosph8 (ENSECRG00000004203) gjb8 (ENSECRG00000004230) ENSECRG00000004243 ENSECRG00000004265 CENPJ (ENSECRG00000004296) ENSECRG00000004318 NPAS2 (ENSECRG00000004334) ENSECRG00000004358 rpl31 (ENSECRG00000004369) TBC1D8 (ENSECRG00000004391) ENSECRG00000004420 cnot11 (ENSECRG00000004447) #18 RNF149 (ENSECRG00000004472) #19 creg2 (ENSECRG00000004489) #20 ENSECRG00000004510 MAP4K4 (ENSECRG00000004569) #22 IL1R2 (ENSECRG00000004612) #23 IL1RL2 (ENSECRG00000004631) ##23 ENSECRG00000004650 ##23 ZC3H12C (ENSECRG00000004663) RDX (ENSECRG00000004684) FDX1 (ENSECRG00000004719) ARHGAP20 (ENSECRG00000004759) PDCL3 (ENSECRG00000004963) chst10 (ENSECRG00000004969) LONRF2 (ENSECRG00000004977) ENSECRG00000004994 rev1 (ENSECRG00000005010) EIF5B (ENSECRG00000005048) txndc9 (ENSECRG00000005091) mrpl30 (ENSECRG00000000812) Neopterygii ANCESTRAL SPECIES 1 ENSGT00550000074800.a.a.a ENSGT00550000074800.a.b ENSGT00940000163195.B ENSGT01090000260278 ENSGT00390000002753 ENSGT00940000158859 ENSGT01030000234607.B ENSGT00940000157954 ENSGT00940000165303 ENSGT00390000007741.b ENSGT00940000155863 ENSGT00940000159106 ENSGT00830000128380 ENSGT00390000000227 ENSGT00950000183075.a.b ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.b #23 ENSGT00940000159309 ENSGT00940000160673 ENSGT00390000017846 ENSGT00940000155526 ENSGT00390000008686.d ENSGT00950000182984.b.a.b ENSGT00940000159683 ENSGT00390000012728 ENSGT00950000183197.b.b ENSGT00940000155442 ENSGT00940000155963 ENSGT00900000142763 ENSGT00390000007069 ENSGT00940000157735 Spotted gar MODERN SPECIES 655 HTR2A (ENSLOCG00000010438) esd (ENSLOCG00000010443) LRCH1 (ENSLOCG00000010453) RUBCNL (ENSLOCG00000010487) ENSLOCG00000010500 lcp1 (ENSLOCG00000010513) cpb2 (ENSLOCG00000010552) zc3h13 (ENSLOCG00000010561) cnot11 (ENSLOCG00000010579) #18 TBC1D8 (ENSLOCG00000010590) ENSLOCG00000010608 PDCL3 (ENSLOCG00000010617) chst10 (ENSLOCG00000010623) LONRF2 (ENSLOCG00000010632) ENSLOCG00000010640 MAP4K4 (ENSLOCG00000010658) #22 ENSLOCG00000010694 #23 ENSLOCG00000010702 ##23 IL1RL1 (ENSLOCG00000010707) #26 ENSLOCG00000010717 RDX (ENSLOCG00000010737) FDX1 (ENSLOCG00000010750) ARHGAP20 (ENSLOCG00000010758) ENSLOCG00000010768 ENSLOCG00000010780 ENSLOCG00000010789 mad2l1 (ENSLOCG00000010803) mphosph8 (ENSLOCG00000010812) pspc1 (ENSLOCG00000010832) ZMYM2 (ENSLOCG00000010842) gjb8 (ENSLOCG00000017805) Osteoglossocephalai ANCESTRAL SPECIES 6 ENSGT00550000074800.a.b ENSGT00940000163195.B.a ENSGT00390000002753 ENSGT00940000158859 ENSGT01030000234607.B ENSGT00940000157954 ENSGT00940000165303 ENSGT00390000007741.b ENSGT00940000155863 ENSGT00940000159106 ENSGT00830000128380 ENSGT00390000000227 ENSGT00950000183075.a.b ENSGT01060000250476 ENSGT00440000033329.b.a.a ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000159309 ENSGT00940000160673 ENSGT00390000017846 ENSGT00940000155526 ENSGT00390000008686.d.a ENSGT00950000182984.b.a.b ENSGT00940000159683 ENSGT00390000012728 ENSGT00950000183197.b.b ENSGT00940000155442 ENSGT00940000155963.e ENSGT00940000157735 Clupeocephala ANCESTRAL SPECIES 3 ENSGT00940000164857 ENSGT00940000157232 ENSGT00940000165617 ENSGT00550000074800.a.a.a ENSGT00940000163195.B.b ENSGT01090000260278 ENSGT00390000002753 ENSGT00940000158859.e ENSGT01030000234607.B ENSGT00940000157954 ENSGT00390000007741.b ENSGT00940000159106 ENSGT00830000128380 ENSGT00390000000227 ENSGT00950000183075.a.b ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000159309 ENSGT00940000160673 ENSGT00390000017846 ENSGT00940000155526.j ENSGT00940000155526.i.b ENSGT00390000008686.d.a ENSGT00950000182984.b.a.b.f ENSGT00940000178351 ENSGT00940000155526.i.a ENSGT00390000008686.d.b ENSGT00950000182984.b.a.b.e Euteleosteomorpha DUPLICATION Euteleosteomorpha DUPLICATION Euteleosteomorpha ANCESTRAL SPECIES 162 ENSGT01050000244937.a.a ENSGT00390000010170.a.b ENSGT00390000012063 ENSGT00950000183115.b.a.m.a ENSGT00940000160136.p ENSGT00960000191502 ENSGT00550000075118.l ENSGT00950000183097.a.a.b ENSGT00390000006356 #18 ENSGT00950000183030 ENSGT00960000186941 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01000000215431 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b ENSGT00940000163999.a Acanthomorphata ANCESTRAL SPECIES 197 ENSGT00390000011864 ENSGT01050000244937.a.a ENSGT00390000010170.a.b ENSGT00390000012063 ENSGT00950000183115.b.a.m.a ENSGT00940000160136.p ENSGT00960000191502 ENSGT00550000075118.l ENSGT00950000183097.a.a.b ENSGT00390000006356 #18 ENSGT00960000186941 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 Euacanthomorphacea ANCESTRAL SPECIES 53 ENSGT00390000011864 ENSGT01050000244937.a.a ENSGT00390000010170.a.b ENSGT00390000012063 ENSGT00950000183115.b.a.m.a ENSGT00940000160136.p ENSGT00960000191502 ENSGT00550000075118.l ENSGT00950000183097.a.a.b ENSGT00390000006356 #18 ENSGT00960000186941 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01030000234513.B.b.c Percomorphaceae ANCESTRAL SPECIES 38 ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.b.b.b ENSGT00940000154533.a.a.a ENSGT00960000186941 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01030000234513.B.b.c Tiger tail seahorse MODERN SPECIES 49 pdia5 (ENSHCOG00000016469) sec22a (ENSHCOG00000016488) adcy5 (ENSHCOG00000016524) hacd2 (ENSHCOG00000016555) stam2 (ENSHCOG00000016562) CACNB4 (ENSHCOG00000016598) arl5a (ENSHCOG00000016616) ENSHCOG00000016733 ENSHCOG00000016753 ENSHCOG00000016772 ENSHCOG00000016784 TBC1D8 (ENSHCOG00000017043) PDCL3 (ENSHCOG00000017074) ENSHCOG00000017082 LONRF2 (ENSHCOG00000017093) ENSHCOG00000017274 #22 ENSHCOG00000017382 ##23 ENSHCOG00000017385 ##23 ENSHCOG00000017389 ##23 ENSHCOG00000017425 RDX (ENSHCOG00000017470) ENSHCOG00000017599 ENSHCOG00000017676 ENSHCOG00000017922 ENSHCOG00000018006 ENSHCOG00000018054 ZMYM2 (ENSHCOG00000018071) gja3 (ENSHCOG00000018088) ENSHCOG00000018092 gjb8 (ENSHCOG00000018106) cryl1 (ENSHCOG00000018125) Percomorphaceae_B ANCESTRAL SPECIES 17 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00970000193758 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01030000234513.B.b.c Ovalentaria ANCESTRAL SPECIES 14 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00970000193758 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 Ovalentaria_B ANCESTRAL SPECIES 12 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000154533.b.b.b ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01090000262545 Pomacentridae ANCESTRAL SPECIES 135 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000154533.b.b.b ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT00940000158407 Pomacentridae_A ANCESTRAL SPECIES 148 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000154533.b.b.b ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT00940000158407 Amphiprion ANCESTRAL SPECIES 52 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000154533.b.b.b ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT00390000011515 ENSGT00940000165301.a ENSGT01000000214434.B.a.a ENSGT00680000100037 ENSGT00940000155065.xb.a ENSGT00940000154657.A.c ENSGT00940000154657.B ENSGT00940000166277 ENSGT00940000156462.B.c.a.b.b ENSGT00940000156462.B.c.b ENSGT00940000156462.B.c.a.a ENSGT00940000156462.A ENSGT00950000183138.a.b.r.b Orange clownfish MODERN SPECIES 3 ENSAPEG00000000506 pdia5 (ENSAPEG00000000645) ENSAPEG00000000718 sec22a (ENSAPEG00000000731) adcy5 (ENSAPEG00000000760) hacd2 (ENSAPEG00000000828) stam2 (ENSAPEG00000000880) CACNB4 (ENSAPEG00000000953) arl5a (ENSAPEG00000000995) NEB (ENSAPEG00000001049) ENSAPEG00000001640 TBC1D8 (ENSAPEG00000001672) PDCL3 (ENSAPEG00000001738) ENSAPEG00000001752 ENSAPEG00000001771 ENSAPEG00000001809 #22 ENSAPEG00000002031 ##23 ENSAPEG00000002087 ##23 nifk (ENSAPEG00000002123) ENSAPEG00000002198 zgc:172295 (ENSAPEG00000002279) ddx18 (ENSAPEG00000002348) actr3 (ENSAPEG00000002368) ENSAPEG00000002424 ENSAPEG00000002490 ENSAPEG00000002557 cops8 (ENSAPEG00000002579) COL6A3 (ENSAPEG00000002655) ENSAPEG00000002754 ENSAPEG00000002799 ENSAPEG00000002834 Clown anemonefish MODERN SPECIES 582 CACNB4 (ENSAOCG00000013774) arl5a (ENSAOCG00000013722) NEB (ENSAOCG00000000858) ENSAOCG00000013239 TBC1D8 (ENSAOCG00000013192) PDCL3 (ENSAOCG00000013097) ENSAOCG00000013088 ENSAOCG00000013069 ENSAOCG00000013000 #22 ENSAOCG00000012747 ##23 ENSAOCG00000012721 ##23 nifk (ENSAOCG00000012662) ENSAOCG00000012613 zgc:172295 (ENSAOCG00000012545) ddx18 (ENSAOCG00000012438) actr3 (ENSAOCG00000012415) ENSAOCG00000012369 Spiny chromis MODERN SPECIES 1219 ENSAPOG00000004729 ENSAPOG00000004664 #22 ENSAPOG00000004461 ##23 ENSAPOG00000004419 ##23 ENSAPOG00000001056 ##23 PLCL1 (ENSAPOG00000004337) Bicolor damselfish MODERN SPECIES 1625 LONRF2 (ENSSPAG00000016989) ENSSPAG00000016925 #22 ENSSPAG00000016901 ##23 Cichlidae ANCESTRAL SPECIES 14 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01030000234513.B.b.c Pseudocrenilabrinae ANCESTRAL SPECIES 15 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01030000234513.B.b.c Pseudocrenilabrinae_A ANCESTRAL SPECIES 40 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01030000234513.B.b.c Haplochromini ANCESTRAL SPECIES 43 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01030000234513.B.b.c ENSGT00390000007182 Burton s mouthbrooder MODERN SPECIES 415 LONRF2 (ENSHBUG00000002886) ENSHBUG00000003162 #22 ENSHBUG00000003239 ##23 ENSHBUG00000003286 ##23 ENSHBUG00000003326 ##23 ENSHBUG00000003343 #26 ENSHBUG00000003376 ENSHBUG00000003470 ENSHBUG00000003513 ENSHBUG00000003554 ENSHBUG00000001160 ENSHBUG00000003595 ENSHBUG00000003651 ZMYM2 (ENSHBUG00000003684) gja3 (ENSHBUG00000003697) gjb8 (ENSHBUG00000003705) cryl1 (ENSHBUG00000003727) Haplochromini_A ANCESTRAL SPECIES 45 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01030000234513.B.b.c ENSGT00390000007182 Haplochromini_B ANCESTRAL SPECIES 36 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01030000234513.B.b.c Eastern happy MODERN SPECIES 7 ENSACLG00000020184 sec22a (ENSACLG00000020148) ENSACLG00000020139 adcy5 (ENSACLG00000020115) hacd2 (ENSACLG00000020082) stam2 (ENSACLG00000020034) CACNB4 (ENSACLG00000019964) arl5a (ENSACLG00000019945) ENSACLG00000019939 ENSACLG00000019900 NEB (ENSACLG00000019534) TBC1D8 (ENSACLG00000019431) PDCL3 (ENSACLG00000019421) ENSACLG00000019408 LONRF2 (ENSACLG00000019361) ENSACLG00000018854 #22 ENSACLG00000018836 ENSACLG00000018799 ##23 ENSACLG00000018582 ##23 ENSACLG00000018548 ##23 ENSACLG00000018536 #26 ENSACLG00000018493 ENSACLG00000018405 ENSACLG00000018386 ENSACLG00000018338 ENSACLG00000018279 ENSACLG00000018234 ENSACLG00000018148 mphosph8 (ENSACLG00000018073) ZMYM2 (ENSACLG00000017841) gja3 (ENSACLG00000017824) Zebra mbuna MODERN SPECIES 1098 SEMA5B (ENSMZEG00005018764) pdia5 (ENSMZEG00005018787) sec22a (ENSMZEG00005018800) adcy5 (ENSMZEG00005018813) hacd2 (ENSMZEG00005018832) stam2 (ENSMZEG00005018838) CACNB4 (ENSMZEG00005018844) arl5a (ENSMZEG00005018866) NEB (ENSMZEG00005018907) ENSMZEG00005018943 ENSMZEG00005018946 TBC1D8 (ENSMZEG00005018948) PDCL3 (ENSMZEG00005018953) ENSMZEG00005018959 LONRF2 (ENSMZEG00005018961) ENSMZEG00005018991 #22 ENSMZEG00005019077 ##23 ENSMZEG00005019100 ##23 ENSMZEG00005019115 ##23 ENSMZEG00005019130 #26 ENSMZEG00005019137 ENSMZEG00005019148 ENSMZEG00005019155 ENSMZEG00005019166 ENSMZEG00005019175 ENSMZEG00005019178 ENSMZEG00005019186 ENSMZEG00005019198 ZMYM2 (ENSMZEG00005019215) gja3 (ENSMZEG00005019238) gjb8 (ENSMZEG00005019239) P. nyererei MODERN SPECIES 470 SEMA5B (ENSPNYG00000012145) pdia5 (ENSPNYG00000012103) sec22a (ENSPNYG00000012069) adcy5 (ENSPNYG00000012024) hacd2 (ENSPNYG00000011991) stam2 (ENSPNYG00000011970) CACNB4 (ENSPNYG00000011945) arl5a (ENSPNYG00000011933) ENSPNYG00000011838 ENSPNYG00000011810 ENSPNYG00000011749 TBC1D8 (ENSPNYG00000011684) PDCL3 (ENSPNYG00000011629) ENSPNYG00000011613 ENSPNYG00000011589 ENSPNYG00000011542 #22 ENSPNYG00000011510 ##23 Lyretail cichlid MODERN SPECIES 319 ENSNBRG00000013009 mnx2a (ENSNBRG00000012980) MYO1B (ENSNBRG00000012903) BZW1 (ENSNBRG00000012864) LRP1B (ENSNBRG00000012652) RALB (ENSNBRG00000012615) nepro (ENSNBRG00000012587) ENSNBRG00000012545 poglut2 (ENSNBRG00000012518) stxbp5l (ENSNBRG00000012464) gtf2e1 (ENSNBRG00000012453) ENSNBRG00000012444 rabl3 (ENSNBRG00000012423) ENSNBRG00000012410 ENSNBRG00000012375 MAP4K4 (ENSNBRG00000012299) #22 ENSNBRG00000012278 ENSNBRG00000012268 ENSNBRG00000012245 ##23 ENSNBRG00000012215 ##23 ENSNBRG00000012175 ENSNBRG00000012126 ENSNBRG00000012079 ENSNBRG00000012006 ENSNBRG00000011983 ENSNBRG00000011969 ENSNBRG00000011955 TTF2 (ENSNBRG00000011914) mphosph8 (ENSNBRG00000011858) ZMYM2 (ENSNBRG00000011738) gja3 (ENSNBRG00000011700) Nile tilapia MODERN SPECIES 7 hspbap1 (ENSONIG00000017046) slc49a4 (ENSONIG00000017043) SEMA5B (ENSONIG00000017040) pdia5 (ENSONIG00000017035) sec22a (ENSONIG00000017033) adcy5 (ENSONIG00000017027) hacd2 (ENSONIG00000030290) stam2 (ENSONIG00000017025) CACNB4 (ENSONIG00000017022) arl5a (ENSONIG00000033932) NEB (ENSONIG00000017020) TBC1D8 (ENSONIG00000017018) PDCL3 (ENSONIG00000036855) ENSONIG00000027335 ENSONIG00000017014 MAP4K4 (ENSONIG00000017004) #22 ENSONIG00000017002 ##23 ENSONIG00000016999 ##23 ENSONIG00000016997 ##23 ENSONIG00000016996 #26 ENSONIG00000033092 RDX (ENSONIG00000015749) ENSONIG00000015748 ENSONIG00000015746 ENSONIG00000015745 ENSONIG00000015742 mphosph8 (ENSONIG00000015738) ENSONIG00000036762 ZMYM2 (ENSONIG00000015731) gja3 (ENSONIG00000032506) gjb8 (ENSONIG00000020651) Midas cichlid MODERN SPECIES 1364 ENSACIG00000008172 ENSACIG00000008185 ENSACIG00000008202 #22 ENSACIG00000008263 ##23 Atherinomorphae ANCESTRAL SPECIES 13 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00970000193758 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604.b ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 Cyprinodontiformes ANCESTRAL SPECIES 15 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00960000186941 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604.b ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 Aplocheiloidei ANCESTRAL SPECIES 6 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.b.b.b ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604.b ENSGT01000000220454 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b Mangrove rivulus MODERN SPECIES 133 ENSKMAG00000012771 ENSKMAG00000012805 TBC1D8 (ENSKMAG00000012865) PDCL3 (ENSKMAG00000012949) ENSKMAG00000012990 ENSKMAG00000013008 MAP4K4 (ENSKMAG00000013041) #22 ENSKMAG00000013117 ##23 ENSKMAG00000013164 ##23 ENSKMAG00000013204 ##23 ENSKMAG00000013264 #26 ENSKMAG00000013285 RDX (ENSKMAG00000013310) ENSKMAG00000013356 ENSKMAG00000013387 ENSKMAG00000013403 ENSKMAG00000013488 ENSKMAG00000013535 ENSKMAG00000013579 ZMYM2 (ENSKMAG00000013612) gja3 (ENSKMAG00000013644) gjb8 (ENSKMAG00000013654) Turquoise killifish MODERN SPECIES 1623 DIRC2 (ENSNFUG00015008529) ENSNFUG00015008523 SEMA5B (ENSNFUG00015007995) PDIA5 (ENSNFUG00015007813) SEC22A (ENSNFUG00015007779) adcy5 (ENSNFUG00015006978) PTPLB (ENSNFUG00015006878) stam2 (ENSNFUG00015006753) ENSNFUG00015006204 ARL5A (ENSNFUG00015006092) TBC1D8 (ENSNFUG00015005072) NMS (ENSNFUG00015005059) PDCL3 (ENSNFUG00015005043) LONRF2 (ENSNFUG00015005022) ENSNFUG00015024645 ENSNFUG00015010723 #22 IL18R1 (ENSNFUG00015009023) ##23 CABZ01054962.1 (ENSNFUG00015008926) ##23 ENSNFUG00015008892 ENSNFUG00015008877 ##23 ENSNFUG00015008867 #26 ENSNFUG00015008863 ENSNFUG00015008530 ENSNFUG00015008413 ENSNFUG00015008400 ENSNFUG00015008395 CENPJ (ENSNFUG00015008388) ENSNFUG00015008362 ENSNFUG00015008358 mphosph8 (ENSNFUG00015008349) ZMYM2 (ENSNFUG00015008324) Cyprinodontoidei ANCESTRAL SPECIES 13 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00960000186941 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604.b ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 NAME_4 ANCESTRAL SPECIES 68 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00960000186941 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604.b ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01090000262545 ENSGT01030000234513.B.b.c Mummichog MODERN SPECIES 2252 SEMA5B (ENSFHEG00000015846) pdia5 (ENSFHEG00000015960) sec22a (ENSFHEG00000015970) adcy5 (ENSFHEG00000016114) hacd2 (ENSFHEG00000000574) stam2 (ENSFHEG00000016210) CACNB4 (ENSFHEG00000016221) arl5a (ENSFHEG00000016231) NEB (ENSFHEG00000016597) ENSFHEG00000016611 TBC1D8 (ENSFHEG00000016677) PDCL3 (ENSFHEG00000016702) ENSFHEG00000016707 ENSFHEG00000016728 LONRF2 (ENSFHEG00000016740) MAP4K4 (ENSFHEG00000016776) #22 ENSFHEG00000016817 ##23 ENSFHEG00000016823 ##23 ENSFHEG00000016885 ##23 Sheepshead minnow MODERN SPECIES 1247 ENSCVAG00000014710 ENSCVAG00000014691 #22 ENSCVAG00000014284 ##23 Poeciliinae ANCESTRAL SPECIES ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b.e ##23 ENSGT01090000259985.b.b.b.a.b.f ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604.b ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b Poecilia ANCESTRAL SPECIES 13 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00940000163342.a.b.a.a.db.a ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b.e ##23 ENSGT01090000259985.b.b.b.a.b.f ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604.b ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b NAME_6 ANCESTRAL SPECIES 46 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a.s ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00940000163342.a.b.a.a.db.a ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b.e ##23 ENSGT01090000259985.b.b.b.a.b.f ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a.t #26 Amazon molly MODERN SPECIES 271 slc15a2 (ENSPFOG00000016217) hspbap1 (ENSPFOG00000016443) slc49a4 (ENSPFOG00000016456) SEMA5B (ENSPFOG00000016495) pdia5 (ENSPFOG00000016645) sec22a (ENSPFOG00000016784) adcy5 (ENSPFOG00000016833) hacd2 (ENSPFOG00000017008) stam2 (ENSPFOG00000017050) ENSPFOG00000017124 ENSPFOG00000017174 TBC1D8 (ENSPFOG00000017224) PDCL3 (ENSPFOG00000017314) ENSPFOG00000017326 LONRF2 (ENSPFOG00000017363) ENSPFOG00000017421 #22 ENSPFOG00000017532 ##23 ENSPFOG00000017535 ##23 ENSPFOG00000017547 ##23 ENSPFOG00000017568 #26 ENSPFOG00000024092 ENSPFOG00000017581 #26 Sailfin molly MODERN SPECIES 455 ENSPLAG00000021673 TBC1D8 (ENSPLAG00000021627) PDCL3 (ENSPLAG00000021574) ENSPLAG00000021565 ENSPLAG00000021555 LONRF2 (ENSPLAG00000021535) ENSPLAG00000021529 #22 ENSPLAG00000021476 ##23 Guppy MODERN SPECIES 450 SEMA5B (ENSPREG00000003186) pdia5 (ENSPREG00000003118) sec22a (ENSPREG00000003109) adcy5 (ENSPREG00000003040) hacd2 (ENSPREG00000002994) stam2 (ENSPREG00000002873) CACNB4 (ENSPREG00000002834) arl5a (ENSPREG00000002806) NEB (ENSPREG00000002445) TBC1D8 (ENSPREG00000002317) PDCL3 (ENSPREG00000002284) ENSPREG00000002245 ENSPREG00000002217 ENSPREG00000002164 LONRF2 (ENSPREG00000002145) ENSPREG00000002031 #22 ENSPREG00000002016 ##23 ENSPREG00000001958 ##23 ENSPREG00000001868 ##23 ENSPREG00000001752 ##23 ENSPREG00000001663 #26 ENSPREG00000001607 ENSPREG00000001548 ENSPREG00000001527 ENSPREG00000001414 ENSPREG00000001362 ENSPREG00000001280 ENSPREG00000001258 ENSPREG00000001220 ZMYM2 (ENSPREG00000001205) gja3 (ENSPREG00000001183) Platyfish MODERN SPECIES 21 SEMA5B (ENSXMAG00000000810) pdia5 (ENSXMAG00000000792) sec22a (ENSXMAG00000000784) adcy5 (ENSXMAG00000000770) hacd2 (ENSXMAG00000012243) stam2 (ENSXMAG00000012271) CACNB4 (ENSXMAG00000007962) ENSXMAG00000024250 arl5a (ENSXMAG00000007983) NEB (ENSXMAG00000019159) TBC1D8 (ENSXMAG00000019137) PDCL3 (ENSXMAG00000024770) ENSXMAG00000028733 ENSXMAG00000019116 LONRF2 (ENSXMAG00000019107) ENSXMAG00000019084 #22 ENSXMAG00000019078 ##23 ENSXMAG00000024246 ##23 ENSXMAG00000025926 ##23 ENSXMAG00000002345 ##23 ENSXMAG00000021454 #26 ENSXMAG00000026599 #26 ENSXMAG00000026589 ENSXMAG00000014715 ENSXMAG00000014727 ENSXMAG00000028200 ENSXMAG00000014747 ENSXMAG00000014758 ENSXMAG00000014772 ENSXMAG00000014800 ZMYM2 (ENSXMAG00000014819) Oryzias ANCESTRAL SPECIES 10 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00970000193758 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b.c ##23 ENSGT01090000259985.b.b.b.a.b.d ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT00940000178691 ENSGT01090000260082.d.a.b.o.b ENSGT00950000182900.C ENSGT00940000157829 ENSGT00510000047417 ENSGT00940000159616 ENSGT00940000160302 ENSGT00940000158618 ENSGT00940000155009.a ENSGT00390000003231.b ENSGT00530000063186.a Oryzias_b ANCESTRAL SPECIES 10 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00970000193758 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b.c ##23 ENSGT01090000259985.b.b.b.a.b.d ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT00940000178691 ENSGT01090000260082.d.a.b.o.b ENSGT00950000182900.C ENSGT00940000157829 ENSGT00510000047417 ENSGT00940000159616 ENSGT00940000160302 ENSGT00940000158618 ENSGT00940000155009.a ENSGT00390000003231.b ENSGT00530000063186.a Indian medaka MODERN SPECIES 18 slc49a4 (ENSOMEG00000016617) SEMA5B (ENSOMEG00000016740) pdia5 (ENSOMEG00000016828) sec22a (ENSOMEG00000016874) adcy5 (ENSOMEG00000017031) hacd2 (ENSOMEG00000017075) stam2 (ENSOMEG00000017132) CACNB4 (ENSOMEG00000000427) arl5a (ENSOMEG00000017228) NEB (ENSOMEG00000017518) ENSOMEG00000017591 TBC1D8 (ENSOMEG00000017709) PDCL3 (ENSOMEG00000017760) ENSOMEG00000017777 LONRF2 (ENSOMEG00000017796) MAP4K4 (ENSOMEG00000018134) #22 ENSOMEG00000018288 ##23 ENSOMEG00000018317 ##23 ENSOMEG00000018459 ##23 ENSOMEG00000018561 ##23 ENSOMEG00000018595 ENSOMEG00000018642 RDX (ENSOMEG00000018770) dcaf6 (ENSOMEG00000018956) gpr161b (ENSOMEG00000019007) OTC (ENSOMEG00000000500) ENSOMEG00000019054 srpx (ENSOMEG00000019129) SYTL5 (ENSOMEG00000019206) DYNLT3 (ENSOMEG00000019242) xk (ENSOMEG00000019255) Javanese ricefish MODERN SPECIES 13 slc49a4 (ENSOJAG00000021169) SEMA5B (ENSOJAG00000021249) pdia5 (ENSOJAG00000021691) sec22a (ENSOJAG00000021910) adcy5 (ENSOJAG00000022023) hacd2 (ENSOJAG00000022341) stam2 (ENSOJAG00000022370) CACNB4 (ENSOJAG00000022497) arl5a (ENSOJAG00000022605) ENSOJAG00000022657 TBC1D8 (ENSOJAG00000023120) ENSOJAG00000023138 PDCL3 (ENSOJAG00000023142) ENSOJAG00000023151 ENSOJAG00000023167 MAP4K4 (ENSOJAG00000023340) #22 ENSOJAG00000023529 ##23 ENSOJAG00000023544 ##23 ENSOJAG00000023559 ##23 ENSOJAG00000023566 ##23 ENSOJAG00000023575 #26 ENSOJAG00000023582 RDX (ENSOJAG00000023621) dcaf6 (ENSOJAG00000023706) gpr161b (ENSOJAG00000023754) OTC (ENSOJAG00000023758) gdf3 (ENSOJAG00000023760) OTC (ENSOJAG00000023763) ENSOJAG00000012654 srpx (ENSOJAG00000012703) SYTL5 (ENSOJAG00000013005) Oryzias_a ANCESTRAL SPECIES 46 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00970000193758 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b.c ##23 ENSGT01090000259985.b.b.b.a.b.d ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT00940000178691 ENSGT01090000260082.d.a.b.o.b ENSGT00950000182900.C ENSGT00940000157829 ENSGT00510000047417 ENSGT00940000159616 ENSGT00940000160302 ENSGT00940000158618 ENSGT00940000155009.a ENSGT00390000003231.b ENSGT00530000063186.a Japanese Medaka HdrR MODERN SPECIES 13 adcy5 (ENSORLG00000009753) hacd2 (ENSORLG00000009719) stam2 (ENSORLG00000009689) CACNB4 (ENSORLG00000024066) arl5a (ENSORLG00000009664) ENSORLG00000009639 ENSORLG00000025341 ENSORLG00000029464 ENSORLG00000025648 TBC1D8 (ENSORLG00000009369) ENSORLG00000022389 PDCL3 (ENSORLG00000009325) ENSORLG00000009303 ENSORLG00000023781 LONRF2 (ENSORLG00000009293) ENSORLG00000009266 #22 ENSORLG00000009213 ##23 ENSORLG00000024138 ##23 ENSORLG00000022543 ##23 ENSORLG00000009200 ##23 ENSORLG00000009188 ENSORLG00000022275 ENSORLG00000009173 dcaf6 (ENSORLG00000009112) gpr161b (ENSORLG00000009074) OTC (ENSORLG00000009056) ENSORLG00000021822 srpx (ENSORLG00000009008) SYTL5 (ENSORLG00000008988) DYNLT3 (ENSORLG00000008965) XK (ENSORLG00000028604) Chinese medaka MODERN SPECIES 893 slc15a2 (ENSOSIG00000012930) slc49a4 (ENSOSIG00000014203) SEMA5B (ENSOSIG00000014210) pdia5 (ENSOSIG00000014796) sec22a (ENSOSIG00000016096) adcy5 (ENSOSIG00000016118) hacd2 (ENSOSIG00000017534) stam2 (ENSOSIG00000017555) CACNB4 (ENSOSIG00000017617) arl5a (ENSOSIG00000018187) NEB (ENSOSIG00000018414) TBC1D8 (ENSOSIG00000018987) PDCL3 (ENSOSIG00000018994) ENSOSIG00000018996 LONRF2 (ENSOSIG00000019009) ENSOSIG00000019043 #22 ENSOSIG00000019292 ##23 ENSOSIG00000019299 ##23 ENSOSIG00000019304 ##23 ENSOSIG00000019305 ENSOSIG00000019306 #26 ENSOSIG00000019314 ENSOSIG00000019371 dcaf6 (ENSOSIG00000019887) gpr161b (ENSOSIG00000020335) OTC (ENSOSIG00000020343) ENSOSIG00000020454 srpx (ENSOSIG00000020476) SYTL5 (ENSOSIG00000020479) Percomorphaceae_C ANCESTRAL SPECIES 13 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00970000193758 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 Percomorphaceae_D ANCESTRAL SPECIES 12 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00970000193758 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00940000162718 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b Anabantaria ANCESTRAL SPECIES 14 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000180504 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01030000234513.B.b.c ENSGT01030000234915 Zig-zag eel MODERN SPECIES 13 hspbap1 (ENSMAMG00000026001) slc49a4 (ENSMAMG00000019623) SEMA5B (ENSMAMG00000019659) pdia5 (ENSMAMG00000019703) sec22a (ENSMAMG00000019731) adcy5 (ENSMAMG00000019746) hacd2 (ENSMAMG00000019801) stam2 (ENSMAMG00000019821) CACNB4 (ENSMAMG00000019860) ARL5A (ENSMAMG00000027277) NEB (ENSMAMG00000019894) ENSMAMG00000020181 ENSMAMG00000020192 ENSMAMG00000024626 ENSMAMG00000020227 ENSMAMG00000020244 #22 ENSMAMG00000020327 ##23 ENSMAMG00000020340 ##23 ENSMAMG00000026143 ENSMAMG00000024378 ##23 ENSMAMG00000020363 #26 ENSMAMG00000020372 ENSMAMG00000020376 ENSMAMG00000020394 ENSMAMG00000020403 ENSMAMG00000020420 ENSMAMG00000020428 ENSMAMG00000027297 mphosph8 (ENSMAMG00000020440) gja3 (ENSMAMG00000025088) gjb8 (ENSMAMG00000020471) Anabantoidei ANCESTRAL SPECIES 13 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01030000234513.B.b.c ENSGT01030000234915 Siamese fighting fish MODERN SPECIES 11 hspbap1 (ENSBSLG00000026317) slc49a4 (ENSBSLG00000026314) SEMA5B (ENSBSLG00000026308) pdia5 (ENSBSLG00000026268) sec22a (ENSBSLG00000026258) ENSBSLG00000026257 adcy5 (ENSBSLG00000026233) hacd2 (ENSBSLG00000026204) stam2 (ENSBSLG00000026132) ENSBSLG00000026022 arl5a (ENSBSLG00000025945) TBC1D8 (ENSBSLG00000025466) PDCL3 (ENSBSLG00000025447) ENSBSLG00000025438 LONRF2 (ENSBSLG00000025406) ENSBSLG00000025030 #22 ENSBSLG00000025004 ##23 ENSBSLG00000025002 ##23 ENSBSLG00000024992 ##23 ENSBSLG00000024988 ##23 ENSBSLG00000024967 #26 ENSBSLG00000024960 ENSBSLG00000024274 ENSBSLG00000024248 ENSBSLG00000024244 ENSBSLG00000024239 ENSBSLG00000024234 ENSBSLG00000024232 ENSBSLG00000024227 ENSBSLG00000024190 ENSBSLG00000024148 Climbing perch MODERN SPECIES 12 hspbap1 (ENSATEG00000028873) slc49a4 (ENSATEG00000004012) SEMA5B (ENSATEG00000003908) pdia5 (ENSATEG00000003836) sec22a (ENSATEG00000003791) adcy5 (ENSATEG00000003696) hacd2 (ENSATEG00000003649) stam2 (ENSATEG00000028152) CACNB4 (ENSATEG00000003524) ARL5A (ENSATEG00000003498) NEB (ENSATEG00000002749) ENSATEG00000002673 ENSATEG00000002656 ENSATEG00000002636 ENSATEG00000002621 ENSATEG00000002499 #22 ENSATEG00000002454 ##23 ENSATEG00000002411 ##23 ENSATEG00000002367 ##23 ENSATEG00000002356 ##23 ENSATEG00000002343 #26 ENSATEG00000002260 ENSATEG00000002204 ENSATEG00000002198 ENSATEG00000002067 ENSATEG00000002059 ENSATEG00000002050 ENSATEG00000002046 ZMYM2 (ENSATEG00000002011) gja3 (ENSATEG00000001986) gjb8 (ENSATEG00000001932) Carangaria ANCESTRAL SPECIES 12 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00970000193758 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a.a.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 ENSGT01030000234513.B.b.c Carangaria_A ANCESTRAL SPECIES 11 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00970000193758 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a.a.b ENSGT00940000154633.id.a.a.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 Seriola ANCESTRAL SPECIES 6 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000180504 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a.a.b ENSGT00940000154633.id.a.a.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000162718 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 Greater amberjack MODERN SPECIES 21 slc49a4 (ENSSDUG00000011881) SEMA5B (ENSSDUG00000011942) pdia5 (ENSSDUG00000012035) sec22a (ENSSDUG00000012096) adcy5 (ENSSDUG00000012121) hacd2 (ENSSDUG00000012187) stam2 (ENSSDUG00000012211) CACNB4 (ENSSDUG00000012235) arl5a (ENSSDUG00000012261) NEB (ENSSDUG00000012291) ENSSDUG00000012644 TBC1D8 (ENSSDUG00000012655) PDCL3 (ENSSDUG00000012715) ENSSDUG00000012749 LONRF2 (ENSSDUG00000012768) ENSSDUG00000012823 #22 ENSSDUG00000013083 ##23 ENSSDUG00000013116 ENSSDUG00000013124 ##23 ENSSDUG00000013156 ##23 ENSSDUG00000013210 #26 ENSSDUG00000013237 ENSSDUG00000013349 ENSSDUG00000013413 ENSSDUG00000013530 ENSSDUG00000013590 TTF2 (ENSSDUG00000013617) ENSSDUG00000013660 ZMYM2 (ENSSDUG00000013698) gja3 (ENSSDUG00000013756) gjb8 (ENSSDUG00000013781) Barramundi perch MODERN SPECIES 588 ENSLCAG00010011218 ENSLCAG00010010709 #22 ENSLCAG00010010581 ##23 Pleuronectoidei ANCESTRAL SPECIES 9 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a.a.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01030000234513.B.b.c ENSGT01030000234915 Tongue sole MODERN SPECIES 7 ENSCSEG00000003524 DGKG (ENSCSEG00000003511) etv5a (ENSCSEG00000003505) itgb5 (ENSCSEG00000003492) tnfaip6 (ENSCSEG00000003481) hacd2 (ENSCSEG00000003470) stam2 (ENSCSEG00000003459) ENSCSEG00000003457 cacnb4b (ENSCSEG00000003446) arl5a (ENSCSEG00000003442) NEB (ENSCSEG00000003369) TBC1D8 (ENSCSEG00000003354) PDCL3 (ENSCSEG00000003347) ENSCSEG00000003345 ENSCSEG00000003336 ENSCSEG00000003329 #22 ENSCSEG00000003312 ##23 ccnyl1 (ENSCSEG00000003305) fzd5 (ENSCSEG00000003301) PLEKHM3 (ENSCSEG00000003299) LANCL3 (ENSCSEG00000003293) GRPR (ENSCSEG00000003291) asb11 (ENSCSEG00000003287) piga (ENSCSEG00000003284) appb (ENSCSEG00000003260) gabpa (ENSCSEG00000003241) u2af1 (ENSCSEG00000003238) CBS (ENSCSEG00000003180) MBNL2 (ENSCSEG00000003163) RAP2A (ENSCSEG00000003157) FARP1 (ENSCSEG00000003070) Turbot MODERN SPECIES 5 slc15a2 (ENSSMAG00000005904) hspbap1 (ENSSMAG00000005985) slc49a4 (ENSSMAG00000006001) pdia5 (ENSSMAG00000006223) sec22a (ENSSMAG00000006273) adcy5 (ENSSMAG00000006314) hacd2 (ENSSMAG00000029560) stam2 (ENSSMAG00000006399) CACNB4 (ENSSMAG00000006462) ARL5A (ENSSMAG00000031119) NEB (ENSSMAG00000006578) ENSSMAG00000006884 ENSSMAG00000007011 ENSSMAG00000007031 ENSSMAG00000007046 ENSSMAG00000007075 #22 ENSSMAG00000007143 ##23 ENSSMAG00000007167 ##23 ENSSMAG00000007220 ##23 ENSSMAG00000007236 #26 ENSSMAG00000031127 ENSSMAG00000007284 ENSSMAG00000007410 ENSSMAG00000007429 ENSSMAG00000007507 ENSSMAG00000007532 mphosph8 (ENSSMAG00000007565) ZMYM2 (ENSSMAG00000007592) gja3 (ENSSMAG00000028052) gjb8 (ENSSMAG00000007632) ENSSMAG00000018221 Eupercaria ANCESTRAL SPECIES 18 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00970000193758 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 Tetraodontidae ANCESTRAL SPECIES ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01000000215431 ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01030000234513.B.b.c ENSGT01030000234915 ENSGT00390000007182 Tetraodon MODERN SPECIES 13 hspbap1 (ENSTNIG00000015702) slc49a4 (ENSTNIG00000015701) SEMA5B (ENSTNIG00000015700) pdia5 (ENSTNIG00000015699) sec22a (ENSTNIG00000015698) adcy5 (ENSTNIG00000015697) hacd2 (ENSTNIG00000001029) stam2 (ENSTNIG00000015696) CACNB4 (ENSTNIG00000015695) arl5a (ENSTNIG00000000814) NEB (ENSTNIG00000015694) ENSTNIG00000015693 TBC1D8 (ENSTNIG00000015692) PDCL3 (ENSTNIG00000015691) LONRF2 (ENSTNIG00000015690) MAP4K4 (ENSTNIG00000015689) #22 ENSTNIG00000015688 ##23 ENSTNIG00000015687 ##23 ENSTNIG00000015686 ##23 ENSTNIG00000015685 ENSTNIG00000015684 ENSTNIG00000015683 ENSTNIG00000015682 ENSTNIG00000015681 ENSTNIG00000015680 ENSTNIG00000015679 mphosph8 (ENSTNIG00000015678) ZMYM2 (ENSTNIG00000015677) gja3 (ENSTNIG00000015676) gjb8 (ENSTNIG00000015675) gjb8 (ENSTNIG00000015674) Fugu MODERN SPECIES slc15a2 (ENSTRUG00000013965) hspbap1 (ENSTRUG00000021585) slc49a4 (ENSTRUG00000014109) SEMA5B (ENSTRUG00000014169) pdia5 (ENSTRUG00000014202) sec22a (ENSTRUG00000014240) adcy5 (ENSTRUG00000014280) hacd2 (ENSTRUG00000014469) stam2 (ENSTRUG00000014510) CACNB4 (ENSTRUG00000014531) arl5a (ENSTRUG00000014614) TBC1D8 (ENSTRUG00000014914) PDCL3 (ENSTRUG00000015045) ENSTRUG00000031657 ENSTRUG00000015072 MAP4K4 (ENSTRUG00000015124) #22 ENSTRUG00000020129 ##23 ENSTRUG00000015305 ##23 ENSTRUG00000015378 ##23 ENSTRUG00000028440 ENSTRUG00000023550 #26 ENSTRUG00000015402 ENSTRUG00000015416 ENSTRUG00000021536 ENSTRUG00000015562 ENSTRUG00000015592 mphosph8 (ENSTRUG00000015641) ZMYM2 (ENSTRUG00000015685) gja3 (ENSTRUG00000019543) ENSTRUG00000024433 gjb8 (ENSTRUG00000015746) Eupecaria_A ANCESTRAL SPECIES 18 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00970000193758 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 Ballan wrasse MODERN SPECIES 324 hacd2 (ENSLBEG00000016611) stam2 (ENSLBEG00000016583) CACNB4 (ENSLBEG00000016524) arl5a (ENSLBEG00000016471) ENSLBEG00000016103 ENSLBEG00000015808 ENSLBEG00000015671 ENSLBEG00000015633 ENSLBEG00000015613 TBC1D8 (ENSLBEG00000015524) ENSLBEG00000015426 ENSLBEG00000015394 ENSLBEG00000015379 ENSLBEG00000015344 ENSLBEG00000013709 #22 ENSLBEG00000012883 ##23 ENSLBEG00000012864 ##23 ENSLBEG00000012809 ##23 ENSLBEG00000012767 ##23 ENSLBEG00000012750 ENSLBEG00000012729 #26 ENSLBEG00000012710 ENSLBEG00000012668 tsn (ENSLBEG00000012620) Eupecaria_B ANCESTRAL SPECIES 18 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 Eupecaria_C ANCESTRAL SPECIES 21 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 ENSGT01030000234513.B.b.c Eupercaria_incertae_sedis ANCESTRAL SPECIES 18 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000155107.b.b ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 ENSGT01030000234513.B.b.c European seabass MODERN SPECIES 5 hspbap1 (ENSDLAG00005014311) slc49a4 (ENSDLAG00005014330) SEMA5B (ENSDLAG00005004374) pdia5 (ENSDLAG00005004909) sec22a (ENSDLAG00005006152) adcy5 (ENSDLAG00005006190) hacd2 (ENSDLAG00005006469) stam2 (ENSDLAG00005006515) ENSDLAG00005006755 NEB (ENSDLAG00005007636) TBC1D8 (ENSDLAG00005012005) ENSDLAG00005012252 ENSDLAG00005032770 ENSDLAG00005028200 ENSDLAG00005012269 MAP4K4 (ENSDLAG00005012299) #22 ENSDLAG00005013606 ##23 ENSDLAG00005021859 ##23 ENSDLAG00005033897 #26 ENSDLAG00005028942 #26 ENSDLAG00005032291 ENSDLAG00005011805 ENSDLAG00005011714 ENSDLAG00005011671 ENSDLAG00005011655 ENSDLAG00005011293 ENSDLAG00005026754 ZMYM2 (ENSDLAG00005011238) gja3 (ENSDLAG00005028270) cryl1 (ENSDLAG00005011214) ift88 (ENSDLAG00005010642) Large yellow croaker MODERN SPECIES asb5a (ENSLCRG00005017272) spata4 (ENSLCRG00005017271) gpm6aa (ENSLCRG00005017241) lrit3a (ENSLCRG00005017237) egf (ENSLCRG00005017229) elovl6 (ENSLCRG00005017225) pitx2 (ENSLCRG00005017213) zgc:77938 (ENSLCRG00005017209) gar1 (ENSLCRG00005017208) ENSLCRG00005017050 eif4ea (ENSLCRG00005017003) ENSLCRG00005017001 ENSLCRG00005017000 LINGO2 (ENSLCRG00005016999) ENSLCRG00005016998 ENSLCRG00005000477 #22 ENSLCRG00005000043 ##23 ENSLCRG00005000042 ENSLCRG00005000041 ENSLCRG00005000040 ENSLCRG00005000039 Gilthead seabream MODERN SPECIES 23 slc49a4 (ENSSAUG00010021301) SEMA5B (ENSSAUG00010020834) pdia5 (ENSSAUG00010019555) sec22a (ENSSAUG00010019528) adcy5 (ENSSAUG00010019016) hacd2 (ENSSAUG00010019006) stam2 (ENSSAUG00010018342) CACNB4 (ENSSAUG00010014802) arl5a (ENSSAUG00010014726) NEB (ENSSAUG00010014596) TBC1D8 (ENSSAUG00010014571) PDCL3 (ENSSAUG00010014568) ENSSAUG00010014564 ENSSAUG00010014561 LONRF2 (ENSSAUG00010014559) ENSSAUG00010010134 #22 IL-1RII (ENSSAUG00010010063) ##23 ENSSAUG00010010059 ##23 ENSSAUG00010010054 ##23 ENSSAUG00010010048 #26 ENSSAUG00010010047 ENSSAUG00010006712 ENSSAUG00010006541 ENSSAUG00010006524 ENSSAUG00010006514 ENSSAUG00010006096 mphosph8 (ENSSAUG00010006024) ZMYM2 (ENSSAUG00010006018) gja3 (ENSSAUG00010006014) gjb8 (ENSSAUG00010006012) ENSSAUG00010006010 Perciformes ANCESTRAL SPECIES 20 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 ENSGT01030000234513.B.b.c Perciformes_a ANCESTRAL SPECIES 21 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156712.b ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT01090000260082.d.a.b.o.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 ENSGT01030000234513.B.b.c Pike perch MODERN SPECIES 1 hspbap1 (ENSSLUG00000013535) slc49a4 (ENSSLUG00000013529) SEMA5B (ENSSLUG00000013249) pdia5 (ENSSLUG00000012869) sec22a (ENSSLUG00000012812) adcy5 (ENSSLUG00000012654) hacd2 (ENSSLUG00000012624) stam2 (ENSSLUG00000012489) CACNB4 (ENSSLUG00000012215) arl5a (ENSSLUG00000012181) NEB (ENSSLUG00000011637) TBC1D8 (ENSSLUG00000011558) PDCL3 (ENSSLUG00000011547) ENSSLUG00000011540 ENSSLUG00000011528 ENSSLUG00000011001 #22 ENSSLUG00000010918 ##23 ENSSLUG00000010893 ##23 ENSSLUG00000010872 ##23 ENSSLUG00000010866 #26 ENSSLUG00000010860 RDX (ENSSLUG00000009314) ENSSLUG00000009173 ENSSLUG00000009141 ENSSLUG00000009127 ENSSLUG00000008982 mphosph8 (ENSSLUG00000008969) ZMYM2 (ENSSLUG00000008951) ENSSLUG00000008938 gja3 (ENSSLUG00000008936) gjb8 (ENSSLUG00000008932) Channel bull blenny MODERN SPECIES 13 cyp27a3 (ENSCGOG00000003834) slc15a2 (ENSCGOG00000003840) hspbap1 (ENSCGOG00000004022) slc49a4 (ENSCGOG00000004023) SEMA5B (ENSCGOG00000004038) ENSCGOG00000004477 adcy5 (ENSCGOG00000004478) hacd2 (ENSCGOG00000004485) CACNB4 (ENSCGOG00000004634) arl5a (ENSCGOG00000007888) NEB (ENSCGOG00000007995) TBC1D8 (ENSCGOG00000011707) PDCL3 (ENSCGOG00000011721) ENSCGOG00000011726 ENSCGOG00000011729 ENSCGOG00000012048 #22 ENSCGOG00000019926 ##23 ENSCGOG00000019934 ##23 Cottioidei ANCESTRAL SPECIES 14 ENSGT00950000182905.a.a.a.a.a.a ENSGT00940000156507 ENSGT00940000159893 ENSGT01030000234625.D ENSGT00940000156797 ENSGT00940000158470 ENSGT00940000158054.d ENSGT00530000062962.a.a ENSGT00940000157055 ENSGT00950000182837.b.b.c.a ENSGT00940000154714 ENSGT00940000154533.a.a.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00440000033329.b.a.a ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000165376 ENSGT00940000162718 ENSGT00940000165604 ENSGT00730000111087 ENSGT00940000157028 ENSGT01050000244864.B.b.a.b ENSGT01040000240566 ENSGT01030000234513.B.b.c ENSGT00390000007182 Lumpfish MODERN SPECIES 13 pdia5 (ENSCLMG00005009114) sec22a (ENSCLMG00005009107) ENSCLMG00005009106 adcy5 (ENSCLMG00005009105) hacd2 (ENSCLMG00005009104) stam2 (ENSCLMG00005009103) CACNB4 (ENSCLMG00005009034) ARL5A (ENSCLMG00005009031) ENSCLMG00005009026 ENSCLMG00005020758 ENSCLMG00005020756 TBC1D8 (ENSCLMG00005020726) PDCL3 (ENSCLMG00005020722) ENSCLMG00005020720 LONRF2 (ENSCLMG00005020705) ENSCLMG00005020245 #22 ENSCLMG00005020229 ##23 ENSCLMG00005020228 ##23 ENSCLMG00005020225 ##23 ENSCLMG00005020218 #26 ENSCLMG00005020217 ENSCLMG00005020213 ENSCLMG00005020212 ENSCLMG00005020210 ENSCLMG00005020201 ENSCLMG00005020200 ENSCLMG00005020196 ENSCLMG00005020194 ZMYM2 (ENSCLMG00005020192) gja3 (ENSCLMG00005020185) ENSCLMG00005020180 Pinecone sodierfish MODERN SPECIES 13 HTR2A (ENSMMDG00005007992) sucla2 (ENSMMDG00005006073) med4 (ENSMMDG00005006013) itm2bb (ENSMMDG00005006007) ENSMMDG00005006000 alg11 (ENSMMDG00005005993) lcp1 (ENSMMDG00005002765) cnot11 (ENSMMDG00005002570) #18 rpl31 (ENSMMDG00005002540) ENSMMDG00005002531 ENSMMDG00005002526 TBC1D8 (ENSMMDG00005024340) PDCL3 (ENSMMDG00005024336) ENSMMDG00005024334 ENSMMDG00005024331 ENSMMDG00005024109 #22 ENSMMDG00005024046 ENSMMDG00005024041 ##23 ENSMMDG00005024032 ##23 ENSMMDG00005024021 ##23 ENSMMDG00005024016 #26 ENSMMDG00005024011 RDX (ENSMMDG00005023952) ENSMMDG00005023938 ENSMMDG00005023937 ENSMMDG00005023930 ENSMMDG00005023921 ENSMMDG00005023912 akap17a (ENSMMDG00005023906) asmt (ENSMMDG00005023902) ENSMMDG00005023899 Cod MODERN SPECIES 12 ENSGMOG00000005340 ENSGMOG00000005328 SUCLA2 (ENSGMOG00000005314) med4 (ENSGMOG00000005297) ITM2B (ENSGMOG00000005286) ENSGMOG00000005254 ENSGMOG00000005241 lcp1 (ENSGMOG00000005215) cnot11 (ENSGMOG00000005200) #18 rpl31 (ENSGMOG00000026515) ENSGMOG00000027052 ENSGMOG00000000757 PDCL3 (ENSGMOG00000000790) ENSGMOG00000022311 ENSGMOG00000025691 ENSGMOG00000004144 #22 ENSGMOG00000001478 ##23 ENSGMOG00000032866 ##23 ENSGMOG00000009640 ##23 ENSGMOG00000007170 #26 fundc1 (ENSGMOG00000007162) ENSGMOG00000007134 ccdc80 (ENSGMOG00000031614) slc35a5 (ENSGMOG00000007111) f5 (ENSGMOG00000031050) f5 (ENSGMOG00000034559) f5 (ENSGMOG00000031996) rgcc (ENSGMOG00000003645) vwa8 (ENSGMOG00000007060) DGKH (ENSGMOG00000007040) AKAP11 (ENSGMOG00000032401) Protacanthopterygii ANCESTRAL SPECIES 25 ENSGT00390000011864 ENSGT01050000244937.a.a ENSGT00390000010170.a.b ENSGT00390000012063 ENSGT00950000183115.b.a.m.a ENSGT00940000160136.p ENSGT00960000190972 ENSGT00550000075118.l ENSGT00950000183097.a.a.b ENSGT00390000006356 #18 ENSGT00950000183030.c.a ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00440000033329.b.a.a.d ENSGT00940000155063.a.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000165507 ENSGT00390000016619.a.j ENSGT00940000156472.d ENSGT00940000157043 ENSGT00940000160192.b ENSGT00940000158532 ENSGT00940000160478.e ENSGT00940000157578 ENSGT00940000158443.m ENSGT00940000155392 ENSGT00940000153458.B Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 16 ENSGT00390000012063.s.a ENSGT00940000159528.h ENSGT00390000011864.rb ENSGT01050000244937.a.a.o ENSGT00390000010170.a.b.eb ENSGT00390000012063.s.b ENSGT00950000183115.b.a.m.a.e ENSGT00940000160136.p ENSGT00550000075118.l ENSGT00950000183097.a.a.b.c ENSGT00390000006356.f #18 ENSGT00950000183030.c.b.b.b ENSGT00940000158977.a ENSGT00940000154295.db ENSGT00440000033329.b.a.a.d.a ENSGT00940000155063.a.a.a #22 ENSGT01090000259985.b.b.b.a.b.a ##23 ENSGT00940000173214 ENSGT00950000183097.a.a.b.d ENSGT00390000006356.e #18 ENSGT00950000183030.c.a ENSGT00940000158977.b ENSGT00940000154295.eb ENSGT00940000175639 ENSGT00440000033329.b.a.a.d.b ENSGT00940000155063.a.a.b #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT00940000155558.f ENSGT00940000165507.d Salmoninae_a ANCESTRAL SPECIES ENSGT00940000154265.kc.a.a ENSGT00940000159528.h ENSGT00390000011864.rb ENSGT01050000244937.a.a.o ENSGT00390000010170.a.b.eb ENSGT00390000012063.s.b ENSGT00950000183115.b.a.m.a.e.b ENSGT00940000160136.p ENSGT00950000183097.a.a.b.c ENSGT00390000006356.f #18 ENSGT00950000183030.c.a.b.a.b ENSGT00940000158977.a ENSGT00940000154295.db ENSGT00940000175639.d ENSGT00440000033329.b.a.a.d.a ENSGT00940000155063.a.a.a #22 ENSGT01090000259985.b.b.b.a.b.a.a ##23 ENSGT01090000259985.b.b.b.a.b.a.b ##23 ENSGT00940000155558.e ENSGT00940000165507.c ENSGT00390000016619.a.j.a ENSGT00940000156472.d.a ENSGT00940000157043.i.a ENSGT00940000160192.b.b ENSGT00940000158532.i ENSGT00940000160478.e.b ENSGT00940000157578.ib.a ENSGT00940000158443.m.a ENSGT00940000155392.c ENSGT00940000153458.B.n ENSGT00940000155611.j.b Salmo ANCESTRAL SPECIES 10 ENSGT00940000162297.c.a.e ENSGT00940000159528.h ENSGT00390000011864.rb ENSGT01050000244937.a.a.o ENSGT00390000010170.a.b.eb ENSGT00390000012063.t ENSGT00950000183115.b.a.m.a.e.b ENSGT00940000160136.p ENSGT00950000183097.a.a.b.c ENSGT00390000006356.f #18 ENSGT00950000183030.c.a.b.a.b ENSGT00940000158977.a ENSGT00940000154295.db ENSGT00940000175639.d ENSGT00440000033329.b.a.a.d.a ENSGT00940000155063.a.a.a #22 ENSGT01090000259985.b.b.b.a.b.a.a ##23 ENSGT01090000259985.b.b.b.a.b.a.b ##23 ENSGT00940000155558.e ENSGT00940000165507.c ENSGT00390000016619.a.j.a ENSGT00940000156472.d.a ENSGT00940000157043.i.a ENSGT00940000160192.b.b ENSGT00940000158532.i ENSGT00940000160478.e.b ENSGT00940000157578.ib.a ENSGT00940000158443.m.a ENSGT00940000155392.c ENSGT00940000153458.B.n ENSGT00940000155611.j.b Atlantic salmon MODERN SPECIES 13 ENSSSAG00000113161 LRCH1 (ENSSSAG00000055653) ENSSSAG00000084542 estd (ENSSSAG00000055788) HTR2A (ENSSSAG00000091455) SUCLA2 (ENSSSAG00000055813) ENSSSAG00000056404 ENSSSAG00000056416 lcp1 (ENSSSAG00000056451) cnot11 (ENSSSAG00000056969) #18 rpl31 (ENSSSAG00000057006) ENSSSAG00000057073 PDCL3 (ENSSSAG00000058071) ENSSSAG00000116479 ENSSSAG00000106103 ENSSSAG00000059162 #22 ENSSSAG00000077028 ##23 dnajc10 (ENSSSAG00000077054) ENSSSAG00000085691 frzb (ENSSSAG00000106562) nckap1 (ENSSSAG00000077458) dusp19a (ENSSSAG00000078722) PDE1A (ENSSSAG00000078734) ENSSSAG00000078786 ITPRID2 (ENSSSAG00000078792) neurod1 (ENSSSAG00000099263) cerkl (ENSSSAG00000078804) ENSSSAG00000119408 ITGA4 (ENSSSAG00000078815) ube2e3 (ENSSSAG00000078823) cwc22 (ENSSSAG00000078849) River trout MODERN SPECIES 12 LRCH1 (ENSSTUG00000010012) esd (ENSSTUG00000009984) ENSSTUG00000009980 HTR2A (ENSSTUG00000009968) sucla2 (ENSSTUG00000009821) med4 (ENSSTUG00000009792) itm2bb (ENSSTUG00000009774) ENSSTUG00000009763 lcp1 (ENSSTUG00000008780) cnot11 (ENSSTUG00000008738) #18 rpl31 (ENSSTUG00000008710) TBC1D8 (ENSSTUG00000008672) ENSSTUG00000008652 ENSSTUG00000008643 ENSSTUG00000008634 ENSSTUG00000007929 #22 ENSSTUG00000007803 ##23 ENSSTUG00000007780 ##23 ENSSTUG00000007731 ##23 dnajc10 (ENSSTUG00000005334) frzb (ENSSTUG00000005237) nckap1 (ENSSTUG00000003122) dusp19a (ENSSTUG00000002947) PDE1A (ENSSTUG00000002447) PPP1R1C (ENSSTUG00000002383) ITPRID2 (ENSSTUG00000002343) ENSSTUG00000001976 neurod1 (ENSSTUG00000050885) cerkl (ENSSTUG00000050883) ITGA4 (ENSSTUG00000050828) ENSSTUG00000050821 Oncorhynchus ANCESTRAL SPECIES 13 ENSGT00940000159528.h ENSGT00390000011864.rb ENSGT01050000244937.a.a.o ENSGT00390000010170.a.b.eb ENSGT00390000012063.s.b ENSGT00950000183115.b.a.m.a.e.b ENSGT00940000160136.p ENSGT00960000190972 ENSGT00950000183097.a.a.b.c ENSGT00390000006356.f #18 ENSGT00950000183030.c.a.b.a.a.a ENSGT00940000158977.a ENSGT00940000154295.db ENSGT00940000175639.d ENSGT00440000033329.b.a.a.d.a ENSGT00940000155063.a.a.a #22 ENSGT01090000259985.b.b.b.a.b.a.a ##23 ENSGT01090000259985.b.b.b.a.b.a.b ##23 ENSGT00940000155558.e ENSGT00940000165507.c ENSGT00390000016619.a.j.a ENSGT00940000156472.d.a ENSGT00940000157043.i.a ENSGT01000000220516 ENSGT00940000158532.i ENSGT00940000160478.e.b ENSGT00940000157578.ib.a ENSGT00940000158443.m.a ENSGT00940000155392.c ENSGT00940000153458.B.n ENSGT00940000155611.j.b Rainbow trout MODERN SPECIES 14 ENSOMYG00000014964 LRCH1 (ENSOMYG00000033590) esd (ENSOMYG00000033753) HTR2A (ENSOMYG00000033769) SUCLA2 (ENSOMYG00000033818) med4 (ENSOMYG00000034777) itm2bb (ENSOMYG00000034794) ENSOMYG00000034818 lcp1 (ENSOMYG00000035090) cnot11 (ENSOMYG00000038008) #18 rl31 (ENSOMYG00000038013) ENSOMYG00000038052 PDCL3 (ENSOMYG00000038110) ENSOMYG00000038136 ENSOMYG00000072709 ENSOMYG00000038718 #22 ENSOMYG00000066640 ENSOMYG00000040739 ##23 dnajc10 (ENSOMYG00000040868) frzb (ENSOMYG00000041894) nckap1 (ENSOMYG00000041976) dusp19a (ENSOMYG00000042583) ENSOMYG00000069019 PDE1A (ENSOMYG00000018141) ENSOMYG00000018147 ITPRID2 (ENSOMYG00000018156) neurod1 (ENSOMYG00000018172) cerkl (ENSOMYG00000018179) ITGA4 (ENSOMYG00000018259) ube2e3 (ENSOMYG00000018509) cwc22 (ENSOMYG00000018573) Oncorhynchus_a ANCESTRAL SPECIES 11 ENSGT00390000011864.rb ENSGT01050000244937.a.a.o ENSGT00390000010170.a.b.eb ENSGT00390000012063.s.b ENSGT00950000183115.b.a.m.a.e.b ENSGT00940000160136.p ENSGT00960000190972 ENSGT00950000183097.a.a.b.c ENSGT00390000006356.f #18 ENSGT00950000183030.c.a.b.a.b ENSGT00950000183030.c.a.b.a.a.a ENSGT00940000158977.a ENSGT00940000154295.db ENSGT00940000175639.d ENSGT00440000033329.b.a.a.d.a ENSGT00940000155063.a.a.a #22 ENSGT01090000259985.b.b.b.a.b.a.a ##23 ENSGT01090000259985.b.b.b.a.b.a.b ##23 ENSGT00940000155558.e ENSGT00940000165507.c ENSGT00390000016619.a.j.a ENSGT00940000156472.d.a ENSGT00940000157043.i.a ENSGT01000000220516 ENSGT00940000158532.i ENSGT00940000160478.e.b ENSGT00940000157578.ib.a ENSGT00940000158443.m.a ENSGT00940000155392.c ENSGT00940000153458.B.n ENSGT00940000155611.j.b Coho salmon MODERN SPECIES 18 esd (ENSOKIG00005028857) HTR2A (ENSOKIG00005028884) SUCLA2 (ENSOKIG00005028903) med4 (ENSOKIG00005029093) itm2bb (ENSOKIG00005029147) ENSOKIG00005029175 ENSOKIG00005029197 lcp1 (ENSOKIG00005029274) ENSOKIG00005030096 cnot11 (ENSOKIG00005030107) #18 rpl31 (ENSOKIG00005030157) TBC1D8 (ENSOKIG00005030257) PDCL3 (ENSOKIG00005030447) ENSOKIG00005030460 ENSOKIG00005030487 ENSOKIG00005030663 #22 ENSOKIG00005031919 ##23 ENSOKIG00005031932 ##23 dnajc10 (ENSOKIG00005032059) frzb (ENSOKIG00005033834) nckap1 (ENSOKIG00005033947) dusp19a (ENSOKIG00005035612) PDE1A (ENSOKIG00005035676) ENSOKIG00005036139 ENSOKIG00005036146 ITPRID2 (ENSOKIG00005036174) neurod1 (ENSOKIG00005036184) cerkl (ENSOKIG00005036204) ITGA4 (ENSOKIG00005036271) ube2e3 (ENSOKIG00005037048) cwc22 (ENSOKIG00005037105) Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 75 LRCH1 (ENSOTSG00005010875) esd (ENSOTSG00005010998) HTR2A (ENSOTSG00005010999) sucla2 (ENSOTSG00005011001) med4 (ENSOTSG00005011151) itm2bb (ENSOTSG00005011152) ENSOTSG00005011153 ENSOTSG00005011155 lcp1 (ENSOTSG00005011156) cnot11 (ENSOTSG00005011407) #18 rpl31 (ENSOTSG00005011409) TBC1D8 (ENSOTSG00005011419) ENSOTSG00005011430 ENSOTSG00005011431 ENSOTSG00005011433 ENSOTSG00005011467 #22 ENSOTSG00005037390 ##23 Chinook salmon MODERN SPECIES 18 esd (ENSOTSG00005010786) ENSOTSG00005010787 HTR2A (ENSOTSG00005010788) sucla2 (ENSOTSG00005009829) med4 (ENSOTSG00005009890) itm2bb (ENSOTSG00005009891) ENSOTSG00005009892 ENSOTSG00005009893 lcp1 (ENSOTSG00005009919) cnot11 (ENSOTSG00005009984) #18 rpl31 (ENSOTSG00005009985) TBC1D8 (ENSOTSG00005009989) ENSOTSG00005010062 ENSOTSG00005010063 ENSOTSG00005010065 ENSOTSG00005010066 #22 ENSOTSG00005010793 ##23 dnajc10 (ENSOTSG00005010796) frzb (ENSOTSG00005011166) nckap1 (ENSOTSG00005011185) dusp19a (ENSOTSG00005013212) ENSOTSG00005013213 PDE1A (ENSOTSG00005013217) ENSOTSG00005013219 ITPRID2 (ENSOTSG00005013221) ENSOTSG00005013223 neurod1 (ENSOTSG00005013225) cerkl (ENSOTSG00005013229) ITGA4 (ENSOTSG00005013236) ube2e3 (ENSOTSG00005013252) cwc22 (ENSOTSG00005013254) Huchen MODERN SPECIES 522 ENSHHUG00000031388 LRCH1 (ENSHHUG00000031416) esd (ENSHHUG00000031465) HTR2A (ENSHHUG00000031509) sucla2 (ENSHHUG00000031512) med4 (ENSHHUG00000031560) itm2bb (ENSHHUG00000031623) ENSHHUG00000031628 alg11 (ENSHHUG00000031665) lcp1 (ENSHHUG00000031671) cnot11 (ENSHHUG00000031715) #18 rpl31 (ENSHHUG00000031731) TBC1D8 (ENSHHUG00000031752) PDCL3 (ENSHHUG00000031762) ENSHHUG00000031786 ENSHHUG00000031815 #22 ENSHHUG00000032286 ##23 ENSHHUG00000032304 ENSHHUG00000032312 dnajc10 (ENSHHUG00000032322) frzb (ENSHHUG00000032344) nckap1 (ENSHHUG00000032350) dusp19a (ENSHHUG00000032409) PDE1A (ENSHHUG00000032462) ppp1r1c (ENSHHUG00000032845) ITPRID2 (ENSHHUG00000032849) ENSHHUG00000032863 neurod1 (ENSHHUG00000032866) cerkl (ENSHHUG00000032869) ITGA4 (ENSHHUG00000032940) ube2e3 (ENSHHUG00000032984) Salmoninae ANCESTRAL SPECIES 16 ENSGT00390000006356.f #18 ENSGT00950000183030.c.b.b.b ENSGT00940000158977.a ENSGT00940000154295.db ENSGT00440000033329.b.a.a.d.a ENSGT00940000155063.a.a.a #22 ENSGT01090000259985.b.b.b.a.b.a ##23 ENSGT00940000173214 ENSGT00950000183097.a.a.b.d ENSGT00390000006356.e #18 ENSGT00950000183030.c.a ENSGT00940000158977.b ENSGT00940000154295.eb ENSGT00940000175639 ENSGT00440000033329.b.a.a.d.b ENSGT00940000155063.a.a.b #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT00940000155558.f ENSGT00940000165507.d ENSGT00390000016619.a.j.b ENSGT00940000156472.d.b ENSGT00940000157043.i.b ENSGT00940000160192.b.a ENSGT00940000158532.j ENSGT00940000160478.e.a ENSGT00940000157578.ib.b ENSGT00940000158443.m.b ENSGT00940000155392.d ENSGT00940000153458.B.m Salmoninae_a ANCESTRAL SPECIES ENSGT00940000159528.g ENSGT00390000011864.sb ENSGT01050000244937.a.a.p ENSGT00390000010170.a.b.db ENSGT00390000012063.s.a ENSGT00950000183115.b.a.m.a.f ENSGT00550000075118.l ENSGT00940000173214 ENSGT00950000183097.a.a.b.d ENSGT00390000006356.e #18 ENSGT00950000183030.c.a.b.a.a ENSGT00940000158977.b ENSGT00940000154295.eb ENSGT00940000175639.c ENSGT00440000033329.b.a.a.d.b ENSGT00940000155063.a.a.b #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT00940000155558.f ENSGT00940000165507.d ENSGT00390000016619.a.j.b ENSGT00940000156472.d.b ENSGT00940000157043.i.b ENSGT00940000160192.b.a ENSGT00940000158532.j ENSGT00940000160478.e.a ENSGT00940000157578.ib.b ENSGT00940000158443.m.b ENSGT00940000155392.d ENSGT00940000153458.B.m Salmo ANCESTRAL SPECIES 15 ENSGT00940000159528.g ENSGT00390000011864.sb ENSGT01050000244937.a.a.p ENSGT00390000010170.a.b.db ENSGT00390000012063.s.a ENSGT00950000183115.b.a.m.a.f ENSGT00550000075118.l ENSGT00940000173214 ENSGT00950000183097.a.a.b.d ENSGT00390000006356.e #18 ENSGT00950000183030.c.a.b.a.a ENSGT00940000158977.b ENSGT00940000154295.eb ENSGT00940000175639.c ENSGT00440000033329.b.a.a.d.b ENSGT00940000155063.a.a.b #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b.b ##23 ENSGT01090000259985.b.a.a.b.c ##23 ENSGT00940000155558.f ENSGT00940000165507.d ENSGT00390000016619.a.j.b ENSGT00940000156472.d.b ENSGT00940000157043.i.b ENSGT00940000160192.b.a ENSGT00940000158532.j ENSGT00940000160478.e.a ENSGT00940000157578.ib.b ENSGT00940000158443.m.b ENSGT00940000155392.d ENSGT00940000153458.B.m River trout MODERN SPECIES 16 RUBCNL (ENSSTUG00000036214) LRCH1 (ENSSTUG00000036201) esd (ENSSTUG00000036091) HTR2A (ENSSTUG00000036075) sucla2 (ENSSTUG00000035637) med4 (ENSSTUG00000035585) itm2bb (ENSSTUG00000035560) alg11 (ENSSTUG00000046650) ENSSTUG00000046635 lcp1 (ENSSTUG00000046446) cnot11 (ENSSTUG00000046428) #18 rpl31 (ENSSTUG00000046408) TBC1D8 (ENSSTUG00000046291) PDCL3 (ENSSTUG00000046275) ENSSTUG00000046265 ENSSTUG00000045703 #22 ENSSTUG00000045627 ##23 ENSSTUG00000045605 ##23 ENSSTUG00000045559 ##23 dnajc10 (ENSSTUG00000043162) frzb (ENSSTUG00000042932) nckap1 (ENSSTUG00000041907) dusp19a (ENSSTUG00000041791) ENSSTUG00000041782 PDE1A (ENSSTUG00000040054) PPP1R1C (ENSSTUG00000039968) ENSSTUG00000039943 neurod1 (ENSSTUG00000039933) cerkl (ENSSTUG00000039898) ITGA4 (ENSSTUG00000039797) ube2e3 (ENSSTUG00000039785) Atlantic salmon MODERN SPECIES 17 RUBCNL (ENSSSAG00000080107) LRCH1 (ENSSSAG00000080097) HTR2A (ENSSSAG00000088280) SUCLA2 (ENSSSAG00000079929) MED4 (ENSSSAG00000079881) ITM2B (ENSSSAG00000079874) ENSSSAG00000079872 lrrc63 (ENSSSAG00000079870) lcp1 (ENSSSAG00000079493) cnot11 (ENSSSAG00000079459) #18 rpl31 (ENSSSAG00000098459) ENSSSAG00000079412 PDCL3 (ENSSSAG00000079401) ENSSSAG00000089412 ENSSSAG00000079397 ENSSSAG00000070255 #22 ENSSSAG00000069905 ##23 ENSSSAG00000069897 ##23 il-1rl (ENSSSAG00000069876) ##23 dnajc10 (ENSSSAG00000066165) frzb (ENSSSAG00000105610) nckap1 (ENSSSAG00000065433) dusp19a (ENSSSAG00000098453) PDE1A (ENSSSAG00000064668) ENSSSAG00000064627 ndf1 (ENSSSAG00000064625) cerkl (ENSSSAG00000064618) itga4 (ENSSSAG00000064161) ube2e3 (ENSSSAG00000064121) ENSSSAG00000097702 cwc22 (ENSSSAG00000064032) Oncorhynchus ANCESTRAL SPECIES 3 ENSGT00940000159528.g ENSGT00390000011864.sb ENSGT01050000244937.a.a.p ENSGT00390000010170.a.b.db ENSGT00390000012063.t ENSGT00950000183115.b.a.m.a.f ENSGT00550000075118.l ENSGT00940000173214 ENSGT00950000183097.a.a.b.d ENSGT00390000006356.e #18 ENSGT00950000183030.c.b.b.a ENSGT00940000158977.b ENSGT00940000154295.eb ENSGT00940000175639.c ENSGT00440000033329.b.a.a.d.b ENSGT00940000155063.a.a.b #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT00940000165507.d ENSGT00390000016619.a.j.b ENSGT00940000156472.d.b ENSGT00940000157043.i.b ENSGT00940000160192.b.a ENSGT00940000158532.j ENSGT00940000160478.e.a ENSGT00940000157578.ib.b ENSGT00940000158443.m.b ENSGT00940000155392.d ENSGT00940000153458.B.m ENSGT00940000155611.j.a Oncorhynchus_a ANCESTRAL SPECIES 8 ENSGT00940000159528.g ENSGT00390000011864.sb ENSGT01050000244937.a.a.p ENSGT00390000010170.a.b.db ENSGT00390000012063.s.a ENSGT00950000183115.b.a.m.a.f ENSGT00550000075118.l ENSGT00940000173214 ENSGT00950000183097.a.a.b.d ENSGT00390000006356.e #18 ENSGT00950000183030.c.b.b.a ENSGT00940000158977.b ENSGT00940000154295.eb ENSGT00940000175639.c ENSGT00440000033329.b.a.a.d.b ENSGT00940000155063.a.a.b #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b.b ##23 ENSGT01090000259985.b.a.a.b ##23 ENSGT00940000165507.d ENSGT00390000016619.a.j.b ENSGT00940000156472.d.b ENSGT00940000157043.i.b ENSGT00940000160192.b.a ENSGT00940000158532.j ENSGT00940000160478.e.a ENSGT00940000157578.ib.b ENSGT00940000158443.m.b ENSGT00940000155392.d ENSGT00940000153458.B.m ENSGT00940000155611.j.a Chinook salmon MODERN SPECIES 22 urm1 (ENSOTSG00005005102) CERCAM (ENSOTSG00005005022) LRCH1 (ENSOTSG00005005019) esd (ENSOTSG00005005007) HTR2A (ENSOTSG00005004999) sucla2 (ENSOTSG00005004551) med4 (ENSOTSG00005004412) itm2bb (ENSOTSG00005004376) alg11 (ENSOTSG00005004374) lcp1 (ENSOTSG00005004072) cnot11 (ENSOTSG00005004064) #18 rpl31 (ENSOTSG00005004056) TBC1D8 (ENSOTSG00005004032) PDCL3 (ENSOTSG00005004028) ENSOTSG00005004022 ENSOTSG00005000838 #22 ENSOTSG00005000489 ##23 ENSOTSG00005000398 ##23 ENSOTSG00005000267 ##23 nckap1 (ENSOTSG00005025399) dusp19a (ENSOTSG00005025398) frzb (ENSOTSG00005025397) PDE1A (ENSOTSG00005025312) PPP1R1C (ENSOTSG00005025309) ENSOTSG00005025307 neurod1 (ENSOTSG00005025306) ENSOTSG00005025305 ITGA4 (ENSOTSG00005025288) ube2e3 (ENSOTSG00005025286) cwc22 (ENSOTSG00005024426) znf385b (ENSOTSG00005024422) Coho salmon MODERN SPECIES 11 LRCH1 (ENSOKIG00005018605) esd (ENSOKIG00005018543) HTR2A (ENSOKIG00005018533) sucla2 (ENSOKIG00005018276) med4 (ENSOKIG00005018221) itm2bb (ENSOKIG00005018174) ENSOKIG00005018170 ALG11 (ENSOKIG00005018162) ENSOKIG00005018156 lcp1 (ENSOKIG00005017901) cnot11 (ENSOKIG00005017844) #18 rpl31 (ENSOKIG00005017816) TBC1D8 (ENSOKIG00005017695) PDCL3 (ENSOKIG00005017660) ENSOKIG00005017655 ENSOKIG00005006724 #22 ENSOKIG00005006135 ##23 ENSOKIG00005006100 ##23 ENSOKIG00005006060 ##23 frzb (ENSOKIG00005006044) nckap1 (ENSOKIG00005005471) dusp19a (ENSOKIG00005005408) PDE1A (ENSOKIG00005005252) ENSOKIG00005005207 ENSOKIG00005005187 neurod1 (ENSOKIG00005005172) cerkl (ENSOKIG00005005040) ITGA4 (ENSOKIG00005004923) ube2e3 (ENSOKIG00005004861) cwc22 (ENSOKIG00005004070) znf385b (ENSOKIG00005003987) Rainbow trout MODERN SPECIES 21 HTR2A (ENSOMYG00000060656) SUCLA2 (ENSOMYG00000005173) MED4 (ENSOMYG00000004791) itm2bb (ENSOMYG00000004688) ENSOMYG00000004647 ENSOMYG00000004619 lcp1 (ENSOMYG00000004229) cnot11 (ENSOMYG00000046273) #18 rpl31 (ENSOMYG00000046262) ENSOMYG00000065981 ENSOMYG00000046232 ENSOMYG00000053881 ENSOMYG00000046246 ENSOMYG00000046220 ENSOMYG00000048831 ENSOMYG00000040833 #22 il-1rii (ENSOMYG00000039543) ##23 ENSOMYG00000039521 ##23 il-1r1 (ENSOMYG00000039487) ##23 ENSOMYG00000039463 ENSOMYG00000058071 frzb (ENSOMYG00000068149) nckap1 (ENSOMYG00000037353) dusp19a (ENSOMYG00000074918) PDE1A (ENSOMYG00000033454) PPP1R1C (ENSOMYG00000032985) ITPRID2 (ENSOMYG00000069667) neurod1 (ENSOMYG00000032956) cerkl (ENSOMYG00000032946) ITGA4 (ENSOMYG00000032923) ube2e3 (ENSOMYG00000032901) Huchen MODERN SPECIES 963 TBC1D8 (ENSHHUG00000030083) PDCL3 (ENSHHUG00000030069) ENSHHUG00000030065 ENSHHUG00000029247 #22 ENSHHUG00000029230 ##23 ENSHHUG00000029226 ##23 ENSHHUG00000029218 ##23 ENSHHUG00000029210 ENSHHUG00000029207 frzb (ENSHHUG00000029202) nckap1 (ENSHHUG00000029046) dusp19a (ENSHHUG00000029037) ENSHHUG00000029032 Northern pike MODERN SPECIES 15 LRCH1 (ENSELUG00000008769) esd (ENSELUG00000008859) sucla2 (ENSELUG00000008886) med4 (ENSELUG00000008922) itm2bb (ENSELUG00000008932) ENSELUG00000008978 alg11 (ENSELUG00000009006) ENSELUG00000009024 lcp1 (ENSELUG00000009075) cnot11 (ENSELUG00000009042) #18 rpl31 (ENSELUG00000009093) TBC1D8 (ENSELUG00000009165) PDCL3 (ENSELUG00000009203) ENSELUG00000009235 ENSELUG00000009261 ENSELUG00000000350 #22 ENSELUG00000029809 ##23 ENSELUG00000026731 ENSELUG00000009739 ##23 ENSELUG00000009775 #26 dnajc10 (ENSELUG00000009860) frzb (ENSELUG00000009897) nckap1 (ENSELUG00000010159) dusp19a (ENSELUG00000010201) PDE1A (ENSELUG00000010287) ENSELUG00000010311 ITPRID2 (ENSELUG00000010347) neurod1 (ENSELUG00000025582) cerkl (ENSELUG00000010421) ITGA4 (ENSELUG00000010469) ube2e3 (ENSELUG00000010488) Euteleosteomorpha ANCESTRAL SPECIES 124 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT00390000009178 ENSGT00940000164246.C.d.b ENSGT00940000164480.a.b ENSGT00390000012496.a.c ENSGT00390000019377.b.e ENSGT00940000158283 ENSGT00390000013817 ENSGT00940000156862 ENSGT00940000155232.t.a.b.b ENSGT00940000160749.b ENSGT00940000158655.e ENSGT00940000160898 ENSGT00950000183071.a.a.a.e.b ENSGT01030000234621.F.c Acanthomorphata ANCESTRAL SPECIES 85 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00390000009178 ENSGT00980000198666 ENSGT00940000164246.C.d.b ENSGT00940000164480.a.b ENSGT00390000012496.a.c ENSGT00390000019377.b.e ENSGT00940000158283 ENSGT00390000013817 ENSGT00940000153931.b.b.d ENSGT00940000153931.b.b.c ENSGT00940000155232.t.b.a ENSGT00940000166422 ENSGT00940000155232.t.a.b.b Euacanthomorphacea ANCESTRAL SPECIES 36 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00530000063873.A ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00390000009178 ENSGT00940000164246.C.d.b ENSGT00940000164480.a.b ENSGT00390000012496.a.c ENSGT00390000019377.b.e ENSGT00940000158283 ENSGT00390000013817 ENSGT00940000153931.b.b.d ENSGT00940000153931.b.b.c ENSGT00940000155232.t.b.a ENSGT00940000166422 ENSGT00940000155232.t.a.b.b ENSGT00940000156862 Percomorphaceae ANCESTRAL SPECIES 22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00530000063873.A ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a Tiger tail seahorse MODERN SPECIES 275 abcb6a (ENSHCOG00000010225) cnppd1 (ENSHCOG00000010135) ENSHCOG00000010096 retreg2 (ENSHCOG00000009888) mdh1b (ENSHCOG00000009881) ENSHCOG00000009863 ENSHCOG00000009853 ENSHCOG00000009834 raph1b (ENSHCOG00000009809) alg11 (ENSHCOG00000009773) cpb2 (ENSHCOG00000000303) ENSHCOG00000009742 rpl31 (ENSHCOG00000009739) chst10 (ENSHCOG00000009726) chst10 (ENSHCOG00000009716) MAP4K4 (ENSHCOG00000009697) #22 ENSHCOG00000009568 ARHGEF7 (ENSHCOG00000009454) ENSHCOG00000009403 MCF2L (ENSHCOG00000009356) cab39l (ENSHCOG00000009280) cdadc1 (ENSHCOG00000009258) rcbtb1 (ENSHCOG00000009243) ENSHCOG00000009214 ENSHCOG00000009194 tubgcp3 (ENSHCOG00000009182) ATP11A (ENSHCOG00000009108) SOX1 (ENSHCOG00000008937) ENSHCOG00000008925 ENSHCOG00000008878 ENSHCOG00000008753 Percomorphaceae_B ANCESTRAL SPECIES 22 ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00940000164275.f.c ENSGT00390000018553 Percomorphaceae_C ANCESTRAL SPECIES 23 ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00940000164275.f.c ENSGT00390000018553 Eupercaria ANCESTRAL SPECIES 23 ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00940000164275.f.c ENSGT00390000018553 Eupecaria_A ANCESTRAL SPECIES 23 ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00940000164275.f.c ENSGT00390000018553 Ballan wrasse MODERN SPECIES 914 MAP4K4 (ENSLBEG00000003636) #22 ENSLBEG00000003547 ENSLBEG00000003510 Eupecaria_B ANCESTRAL SPECIES 23 ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00940000164275.f.c ENSGT00390000018553 Eupecaria_C ANCESTRAL SPECIES 27 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00940000164275.f.c ENSGT00390000018553 Eupercaria_incertae_sedis ANCESTRAL SPECIES 31 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00940000164275.f.c ENSGT00390000018553 ENSGT00940000153514.b.m.b European seabass MODERN SPECIES 15 ENSDLAG00005015590 ENSDLAG00005017020 abcb6a (ENSDLAG00005017043) cnppd1 (ENSDLAG00005017316) ENSDLAG00005017447 retreg2 (ENSDLAG00005026804) mdh1b (ENSDLAG00005017625) ENSDLAG00005017672 raph1b (ENSDLAG00005017704) spp2 (ENSDLAG00005026585) alg11 (ENSDLAG00005018603) cpb2 (ENSDLAG00005018614) zc3h13 (ENSDLAG00005018626) ENSDLAG00005018637 ENSDLAG00005032912 ENSDLAG00005018949 #22 ENSDLAG00005029785 ENSDLAG00005024982 ENSDLAG00005025157 ENSDLAG00005025502 rcbtb1 (ENSDLAG00005025521) ENSDLAG00005025543 tubgcp3 (ENSDLAG00005025561) ENSDLAG00005025632 ENSDLAG00005025656 arhgef7b (ENSDLAG00005025674) ENSDLAG00005025778 ENSDLAG00005025847 ENSDLAG00005025856 ENSDLAG00005025657 ENSDLAG00005025864 Large yellow croaker MODERN SPECIES 486 nrp2a (ENSLCRG00005010619) abcb6a (ENSLCRG00005012185) cnppd1 (ENSLCRG00005012371) ENSLCRG00005012462 retreg2 (ENSLCRG00005013249) mdh1b (ENSLCRG00005013252) ENSLCRG00005013256 ENSLCRG00005013258 raph1b (ENSLCRG00005013261) spp2 (ENSLCRG00005013265) alg11 (ENSLCRG00005013267) cpb2 (ENSLCRG00005013268) zc3h13 (ENSLCRG00005013271) rpl31 (ENSLCRG00005013274) chst10 (ENSLCRG00005013277) MAP4K4 (ENSLCRG00005013293) #22 ENSLCRG00005014340 sh3bp4a (ENSLCRG00005014341) s100b (ENSLCRG00005014342) ENSLCRG00005014345 ahr1b (ENSLCRG00005014375) ENSLCRG00005014383 mfsd6a (ENSLCRG00005014384) nab1a (ENSLCRG00005014385) glsa (ENSLCRG00005014400) stat1a (ENSLCRG00005016792) mstna (ENSLCRG00005016812) ALS2 (ENSLCRG00005016821) MPP4 (ENSLCRG00005016829) tmem237b (ENSLCRG00005016841) cyp20a1 (ENSLCRG00005016846) Gilthead seabream MODERN SPECIES 16 ENSSAUG00010017193 nrp2a (ENSSAUG00010016327) abcb6a (ENSSAUG00010016287) cnppd1 (ENSSAUG00010016285) ENSSAUG00010015871 retreg2 (ENSSAUG00010015858) mdh1b (ENSSAUG00010015856) ENSSAUG00010015853 ENSSAUG00010015850 raph1b (ENSSAUG00010015668) spp2 (ENSSAUG00010015659) alg11 (ENSSAUG00010015656) cpb2 (ENSSAUG00010015649) zc3h13 (ENSSAUG00010015648) rpl31 (ENSSAUG00010015646) MAP4K4 (ENSSAUG00010013987) #22 ENSSAUG00010013896 ENSSAUG00010010686 MCF2L (ENSSAUG00010010458) cab39l (ENSSAUG00010010440) cdadc1 (ENSSAUG00010010438) rcbtb1 (ENSSAUG00010010146) FGF14 (ENSSAUG00010010139) tubgcp3 (ENSSAUG00010010123) ATP11A (ENSSAUG00010007402) SOX1 (ENSSAUG00010007362) arhgef7b (ENSSAUG00010005047) ENSSAUG00010005038 ENSSAUG00010002968 SATB2 (ENSSAUG00010002841) crygm6 (ENSSAUG00010002812) Perciformes ANCESTRAL SPECIES 24 ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00940000164275.f.c ENSGT00390000018553 Cottioidei ANCESTRAL SPECIES 24 ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00940000164275.f.c ENSGT00390000018553 Lumpfish MODERN SPECIES 11 ENSCLMG00005006260 cnppd1 (ENSCLMG00005006258) ENSCLMG00005004978 retreg2 (ENSCLMG00005004966) mdh1b (ENSCLMG00005004965) ENSCLMG00005004962 ENSCLMG00005004959 raph1b (ENSCLMG00005004947) spp2 (ENSCLMG00005004942) alg11 (ENSCLMG00005004939) cpb2 (ENSCLMG00005004907) ENSCLMG00005004904 ENSCLMG00005004902 rpl31 (ENSCLMG00005004896) chst10 (ENSCLMG00005004894) MAP4K4 (ENSCLMG00005002739) #22 ENSCLMG00005002730 ENSCLMG00005002728 RDX (ENSCLMG00005000795) ENSCLMG00005000777 MCF2L (ENSCLMG00005000628) cab39l (ENSCLMG00005000599) cdadc1 (ENSCLMG00005000549) rcbtb1 (ENSCLMG00005000540) ENSCLMG00005000536 tubgcp3 (ENSCLMG00005000524) ATP11A (ENSCLMG00005000052) SOX1 (ENSCLMG00005019072) arhgef7b (ENSCLMG00005017440) ENSCLMG00005017235 ENSCLMG00005017219 Stickleback MODERN SPECIES nrp2a (ENSGACG00000015122) abcb6a (ENSGACG00000015126) cnppd1 (ENSGACG00000015132) ENSGACG00000015135 retreg2 (ENSGACG00000015143) mdh1b (ENSGACG00000015146) ENSGACG00000015149 ENSGACG00000015151 raph1b (ENSGACG00000015152) spp2 (ENSGACG00000015156) alg11 (ENSGACG00000015159) cpb2 (ENSGACG00000015162) zc3h13 (ENSGACG00000015166) rpl31 (ENSGACG00000015169) chst10 (ENSGACG00000015172) MAP4K4 (ENSGACG00000015177) #22 tmem47 (ENSGACG00000015180) DMD (ENSGACG00000015181) ENSGACG00000015186 gtf3c3 (ENSGACG00000015188) HECW2 (ENSGACG00000015192) STS (ENSGACG00000015197) pnpla4 (ENSGACG00000015198) pudp (ENSGACG00000015201) nlgn4 (ENSGACG00000015207) PRKX (ENSGACG00000015210) MXRA5 (ENSGACG00000015213) gyg2 (ENSGACG00000015217) cd99 (ENSGACG00000015223) cep70 (ENSGACG00000015229) sowahcb (ENSGACG00000015234) Perciformes_a ANCESTRAL SPECIES 25 ENSGT00940000155270.i.b ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00940000164275.f.c ENSGT00390000018553 Pike perch MODERN SPECIES 9 abcb6a (ENSSLUG00000005199) cnppd1 (ENSSLUG00000005142) ENSSLUG00000005088 retreg2 (ENSSLUG00000023431) mdh1b (ENSSLUG00000023427) ENSSLUG00000023420 ENSSLUG00000023416 ENSSLUG00000023414 raph1b (ENSSLUG00000023307) spp2 (ENSSLUG00000023287) alg11 (ENSSLUG00000023283) cpb2 (ENSSLUG00000023268) ENSSLUG00000023259 rpl31 (ENSSLUG00000023256) chst10 (ENSSLUG00000023251) MAP4K4 (ENSSLUG00000021448) #22 ENSSLUG00000021298 ENSSLUG00000020701 MCF2L (ENSSLUG00000019427) cab39l (ENSSLUG00000019371) cdadc1 (ENSSLUG00000019365) rcbtb1 (ENSSLUG00000019117) ENSSLUG00000019105 tubgcp3 (ENSSLUG00000019071) ATP11A (ENSSLUG00000018831) ENSSLUG00000018752 SOX1 (ENSSLUG00000018748) ENSSLUG00000018742 arhgef7b (ENSSLUG00000018682) ENSSLUG00000018666 ENSSLUG00000018647 Channel bull blenny MODERN SPECIES 11 ENSCGOG00000023549 nrp2a (ENSCGOG00000023135) abcb6a (ENSCGOG00000022961) cnppd1 (ENSCGOG00000022956) ENSCGOG00000022953 retreg2 (ENSCGOG00000022949) mdh1b (ENSCGOG00000022940) ENSCGOG00000022938 ENSCGOG00000022937 raph1b (ENSCGOG00000022764) spp2 (ENSCGOG00000022749) alg11 (ENSCGOG00000022747) cpb2 (ENSCGOG00000022743) rpl31 (ENSCGOG00000022725) chst10 (ENSCGOG00000022724) ENSCGOG00000017296 #22 ENSCGOG00000017118 RDX (ENSCGOG00000013573) MCF2L (ENSCGOG00000012370) cab39l (ENSCGOG00000012336) cdadc1 (ENSCGOG00000012332) rcbtb1 (ENSCGOG00000012009) FGF14 (ENSCGOG00000011997) tubgcp3 (ENSCGOG00000011368) ATP11A (ENSCGOG00000011033) SOX1 (ENSCGOG00000011013) arhgef7b (ENSCGOG00000009531) ENSCGOG00000009396 ENSCGOG00000009350 ENSCGOG00000009342 ENSCGOG00000009326 Tetraodontidae ANCESTRAL SPECIES 22 ENSGT00950000183214.a.b.a.b.f.b.b ENSGT00940000155270.i.b ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00530000063873.A ENSGT00940000156552.c.b ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000159196 ENSGT00940000154443.e ENSGT00940000161679.b ENSGT00940000158367 ENSGT00950000183302 ENSGT00390000002403 ENSGT00530000063669.b.b ENSGT00940000165242.d ENSGT00940000164275.f.d ENSGT00940000157269.a.b Fugu MODERN SPECIES 20 abcb6a (ENSTRUG00000009019) cnppd1 (ENSTRUG00000008996) ENSTRUG00000008850 retreg2 (ENSTRUG00000020062) ENSTRUG00000027970 ENSTRUG00000021914 mdh1b (ENSTRUG00000008621) ENSTRUG00000019725 cd28 (ENSTRUG00000008513) raph1b (ENSTRUG00000008306) alg11 (ENSTRUG00000008200) cpb2 (ENSTRUG00000007671) ENSTRUG00000030462 rpl31 (ENSTRUG00000007359) chst10 (ENSTRUG00000007251) MAP4K4 (ENSTRUG00000006376) #22 ENSTRUG00000022519 RDX (ENSTRUG00000005857) MCF2L (ENSTRUG00000005283) cab39l (ENSTRUG00000005008) cdadc1 (ENSTRUG00000004808) ENSTRUG00000021682 ENSTRUG00000003862 ENSTRUG00000003573 ENSTRUG00000028934 ENSTRUG00000021847 fam184aa (ENSTRUG00000017364) ENSTRUG00000017359 ENSTRUG00000017357 ENSTRUG00000028094 ENSTRUG00000017337 Tetraodon MODERN SPECIES 18 mbnl2 (ENSTNIG00000014533) ENSTNIG00000014532 nrp2a (ENSTNIG00000014531) abcb6a (ENSTNIG00000014530) ENSTNIG00000002465 ENSTNIG00000014529 retreg2 (ENSTNIG00000014528) mdh1b (ENSTNIG00000000378) ENSTNIG00000014527 raph1b (ENSTNIG00000014526) alg11 (ENSTNIG00000014525) cpb2 (ENSTNIG00000014524) zc3h13 (ENSTNIG00000014523) rpl31 (ENSTNIG00000014522) chst10 (ENSTNIG00000014521) ENSTNIG00000014520 #22 ENSTNIG00000014519 RDX (ENSTNIG00000014518) MCF2L (ENSTNIG00000014517) cab39l (ENSTNIG00000014516) cdadc1 (ENSTNIG00000014515) ENSTNIG00000001981 ENSTNIG00000014514 SLC5A3 (ENSTNIG00000014513) ENSTNIG00000014512 fam184aa (ENSTNIG00000014511) ENSTNIG00000014510 ENSTNIG00000014509 ENSTNIG00000014508 arhgef7b (ENSTNIG00000014507) SOX1 (ENSTNIG00000012196) Percomorphaceae_D ANCESTRAL SPECIES 23 ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00390000018553 ENSGT00940000153514.b.m.b Anabantaria ANCESTRAL SPECIES 23 ENSGT00940000155270.i.b ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00390000018553 ENSGT00940000153514.b.m.b Anabantoidei ANCESTRAL SPECIES 23 ENSGT00940000155270.i.b ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000157358 ENSGT00940000154633.id.b ENSGT00940000156916 Climbing perch MODERN SPECIES 11 ENSATEG00000003091 abcb6a (ENSATEG00000003125) cnppd1 (ENSATEG00000027513) ENSATEG00000003266 retreg2 (ENSATEG00000003440) mdh1b (ENSATEG00000003523) ENSATEG00000003650 ENSATEG00000003664 raph1b (ENSATEG00000003709) spp2 (ENSATEG00000003777) alg11 (ENSATEG00000003821) cpb2 (ENSATEG00000003852) zc3h13 (ENSATEG00000003937) ENSATEG00000003942 ENSATEG00000029382 ENSATEG00000003973 #22 ENSATEG00000004134 ENSATEG00000004149 ENSATEG00000004221 cab39l (ENSATEG00000004327) cdadc1 (ENSATEG00000026372) rcbtb1 (ENSATEG00000004379) ENSATEG00000004442 tubgcp3 (ENSATEG00000004470) ENSATEG00000004602 ENSATEG00000004770 arhgef7b (ENSATEG00000004776) ENSATEG00000004855 ENSATEG00000004878 ENSATEG00000004989 ENSATEG00000005000 Siamese fighting fish MODERN SPECIES 10 cnppd1 (ENSBSLG00000003184) ENSBSLG00000003198 retreg2 (ENSBSLG00000003229) mdh1b (ENSBSLG00000003231) ENSBSLG00000003233 ENSBSLG00000003239 mdh1b (ENSBSLG00000003242) ENSBSLG00000003247 ENSBSLG00000003260 spp2 (ENSBSLG00000003287) alg11 (ENSBSLG00000003291) zc3h13 (ENSBSLG00000003293) rpl31 (ENSBSLG00000003300) chst10 (ENSBSLG00000003307) chst10 (ENSBSLG00000003312) MAP4K4 (ENSBSLG00000003402) #22 ENSBSLG00000003461 RDX (ENSBSLG00000003472) ENSBSLG00000003476 ENSBSLG00000003477 MCF2L (ENSBSLG00000003479) cab39l (ENSBSLG00000003481) cdadc1 (ENSBSLG00000003482) rcbtb1 (ENSBSLG00000003483) FGF14 (ENSBSLG00000003484) tubgcp3 (ENSBSLG00000003486) ENSBSLG00000003490 SOX1 (ENSBSLG00000003504) arhgef7b (ENSBSLG00000003511) ENSBSLG00000003518 pspc1 (ENSBSLG00000003519) Zig-zag eel MODERN SPECIES 11 ENSMAMG00000021930 ENSMAMG00000021928 ENSMAMG00000021916 ENSMAMG00000021912 ENSMAMG00000021910 ENSMAMG00000021908 ENSMAMG00000021907 ENSMAMG00000021906 ENSMAMG00000021899 ENSMAMG00000021893 ENSMAMG00000021892 ENSMAMG00000021889 ENSMAMG00000021794 ENSMAMG00000021790 ENSMAMG00000021787 ENSMAMG00000021762 #22 ENSMAMG00000021735 cab39l (ENSMAMG00000021730) cdadc1 (ENSMAMG00000021707) rcbtb1 (ENSMAMG00000021704) ENSMAMG00000021696 tubgcp3 (ENSMAMG00000021681) ENSMAMG00000021662 ENSMAMG00000021660 arhgef7b (ENSMAMG00000021649) ENSMAMG00000021642 ENSMAMG00000021635 ENSMAMG00000021632 ENSMAMG00000021618 ENSMAMG00000021611 ENSMAMG00000021607 Carangaria ANCESTRAL SPECIES 23 ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00390000018553 ENSGT00940000153514.b.m.b Carangaria_A ANCESTRAL SPECIES 23 ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 ENSGT00950000183030.j ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00390000018553 ENSGT00940000153514.b.m.b Seriola ANCESTRAL SPECIES 126 ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 ENSGT00950000183030.j ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a Greater amberjack MODERN SPECIES 246 nrp2a (ENSSDUG00000021601) abcb6a (ENSSDUG00000021632) cnppd1 (ENSSDUG00000021656) ENSSDUG00000021661 retreg2 (ENSSDUG00000021672) mdh1b (ENSSDUG00000021689) ENSSDUG00000021702 ENSSDUG00000021713 raph1b (ENSSDUG00000021717) ENSSDUG00000021755 alg11 (ENSSDUG00000021786) cpb2 (ENSSDUG00000021792) zc3h13 (ENSSDUG00000021808) rpl31 (ENSSDUG00000021821) chst10 (ENSSDUG00000021826) MAP4K4 (ENSSDUG00000021842) #22 ENSSDUG00000021864 Yellowtail amberjack MODERN SPECIES 3221 abcb6a (ENSSLDG00000012975) cnppd1 (ENSSLDG00000012942) ENSSLDG00000012921 retreg2 (ENSSLDG00000012892) mdh1b (ENSSLDG00000012802) ENSSLDG00000012753 ENSSLDG00000012772 raph1b (ENSSLDG00000012713) spp2 (ENSSLDG00000012693) alg11 (ENSSLDG00000012678) cpb2 (ENSSLDG00000012664) ENSSLDG00000012646 ENSSLDG00000012610 chst10 (ENSSLDG00000012582) rpl31 (ENSSLDG00000012384) MAP4K4 (ENSSLDG00000012306) #22 ENSSLDG00000012268 ENSSLDG00000012252 hyi (ENSSLDG00000012220) ENSSLDG00000012201 SZT2 (ENSSLDG00000012083) ENSSLDG00000012059 DDX10 (ENSSLDG00000012041) ENSSLDG00000012017 ENSSLDG00000011998 ENSSLDG00000011964 pcdh18b (ENSSLDG00000011936) ENSSLDG00000011918 pcdh10b (ENSSLDG00000011899) hspa9 (ENSSLDG00000011830) ENSSLDG00000011811 Barramundi perch MODERN SPECIES 157 nrp2a (ENSLCAG00010027064) ENSLCAG00010027080 abcb6a (ENSLCAG00010027087) cnppd1 (ENSLCAG00010027105) ENSLCAG00010027107 retreg2 (ENSLCAG00010027109) mdh1b (ENSLCAG00010027110) ENSLCAG00010027111 ENSLCAG00010027112 raph1b (ENSLCAG00010027114) spp2 (ENSLCAG00010027126) alg11 (ENSLCAG00010027128) cpb2 (ENSLCAG00010027135) rpl31 (ENSLCAG00010027148) chst10 (ENSLCAG00010027159) MAP4K4 (ENSLCAG00010027240) #22 Pleuronectoidei ANCESTRAL SPECIES 42 ENSGT00940000155270.i.b ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.c Turbot MODERN SPECIES ENSSMAG00000006232 abcb6a (ENSSMAG00000006353) cnppd1 (ENSSMAG00000036984) ENSSMAG00000006464 retreg2 (ENSSMAG00000006969) mdh1b (ENSSMAG00000006973) ENSSMAG00000006986 ENSSMAG00000006998 raph1b (ENSSMAG00000007021) spp2 (ENSSMAG00000028508) alg11 (ENSSMAG00000007070) cpb2 (ENSSMAG00000007082) zc3h13 (ENSSMAG00000007110) ENSSMAG00000007130 ENSSMAG00000025555 ENSSMAG00000007176 #22 ENSSMAG00000031623 ENSSMAG00000005339 ENSSMAG00000005108 cab39l (ENSSMAG00000005071) cdadc1 (ENSSMAG00000005048) rcbtb1 (ENSSMAG00000004983) ENSSMAG00000004940 tubgcp3 (ENSSMAG00000004863) ENSSMAG00000004696 ENSSMAG00000004680 arhgef7b (ENSSMAG00000004589) ENSSMAG00000004428 ENSSMAG00000004318 ENSSMAG00000004291 ENSSMAG00000004288 Tongue sole MODERN SPECIES 5 pard3ba (ENSCSEG00000010523) abcb6a (ENSCSEG00000010487) cnppd1 (ENSCSEG00000010476) ENSCSEG00000010452 retreg2 (ENSCSEG00000010438) mdh1b (ENSCSEG00000010427) ENSCSEG00000010396 cd28 (ENSCSEG00000010375) raph1b (ENSCSEG00000010358) raph1b (ENSCSEG00000010351) alg11 (ENSCSEG00000010341) cpb2 (ENSCSEG00000010303) zc3h13 (ENSCSEG00000010275) rpl31 (ENSCSEG00000010181) chst10 (ENSCSEG00000010162) MAP4K4 (ENSCSEG00000010125) #22 ENSCSEG00000010073 abcc4 (ENSCSEG00000010028) lrsam1 (ENSCSEG00000009942) actr1b (ENSCSEG00000009917) cdk9 (ENSCSEG00000009903) fpgs (ENSCSEG00000009878) reep5 (ENSCSEG00000009866) sptlc1 (ENSCSEG00000009841) auh (ENSCSEG00000009830) nfil3 (ENSCSEG00000009825) ROR2 (ENSCSEG00000009796) syk (ENSCSEG00000009733) chd1 (ENSCSEG00000009553) megf10 (ENSCSEG00000009495) pmpcb (ENSCSEG00000009485) Ovalentaria ANCESTRAL SPECIES 23 ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00390000018553 ENSGT00940000153514.b.m.b Ovalentaria_B ANCESTRAL SPECIES 22 ENSGT00940000155270.i.b ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00940000164275.f.c ENSGT00390000018553 Cichlidae ANCESTRAL SPECIES 30 ENSGT00940000155270.i.b ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000160560.b.f.a.b.a.b ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d Pseudocrenilabrinae ANCESTRAL SPECIES 25 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000160560.b.f.a.b.a.b.g.b ENSGT00940000160560.b.f.a.b.a.b.h ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d Pseudocrenilabrinae_A ANCESTRAL SPECIES 29 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000160560.b.f.a.b.a.b.g.b ENSGT00940000160560.b.f.a.b.a.b.h ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d Haplochromini ANCESTRAL SPECIES 26 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000160560.b.f.a.b.a.b.g.b ENSGT00940000160560.b.f.a.b.a.b.h ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d.e.a Burton s mouthbrooder MODERN SPECIES 303 abcb6a (ENSHBUG00000007448) abcb6a (ENSHBUG00000007414) cnppd1 (ENSHBUG00000007382) ENSHBUG00000007370 retreg2 (ENSHBUG00000007360) mdh1b (ENSHBUG00000007343) ENSHBUG00000007258 ENSHBUG00000007244 raph1b (ENSHBUG00000007232) spp2 (ENSHBUG00000007129) ENSHBUG00000007121 cpb2 (ENSHBUG00000007107) zc3h13 (ENSHBUG00000007100) rpl31 (ENSHBUG00000007089) chst10 (ENSHBUG00000007072) MAP4K4 (ENSHBUG00000007019) #22 ENSHBUG00000006831 ENSHBUG00000006815 MCF2L (ENSHBUG00000006771) cab39l (ENSHBUG00000006743) cdadc1 (ENSHBUG00000006723) rcbtb1 (ENSHBUG00000006708) ENSHBUG00000006660 tubgcp3 (ENSHBUG00000006619) ATP11A (ENSHBUG00000006502) Haplochromini_A ANCESTRAL SPECIES 29 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000160560.b.f.a.b.a.b.g.b ENSGT00940000160560.b.f.a.b.a.b.h ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d.e.a Haplochromini_B ANCESTRAL SPECIES 38 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160.e ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d.e.a ENSGT00940000164275.f.d.e.b ENSGT00950000182837.b.b.c.b Zebra mbuna MODERN SPECIES 1105 abcb6a (ENSMZEG00005005732) cnppd1 (ENSMZEG00005005755) ENSMZEG00005005775 retreg2 (ENSMZEG00005005803) mdh1b (ENSMZEG00005005818) ENSMZEG00005005856 ENSMZEG00005005871 raph1b (ENSMZEG00005005956) spp2 (ENSMZEG00005007388) raph1b (ENSMZEG00005007411) ENSMZEG00005007444 cpb2 (ENSMZEG00005007453) zc3h13 (ENSMZEG00005007473) rpl31 (ENSMZEG00005007495) chst10 (ENSMZEG00005007508) MAP4K4 (ENSMZEG00005007556) #22 ENSMZEG00005007718 ENSMZEG00005007733 MCF2L (ENSMZEG00005007790) cab39l (ENSMZEG00005007925) cdadc1 (ENSMZEG00005007951) rcbtb1 (ENSMZEG00005007967) ENSMZEG00005007986 ENSMZEG00005008003 tubgcp3 (ENSMZEG00005008024) ATP11A (ENSMZEG00005008109) SOX1 (ENSMZEG00005008255) ENSMZEG00005008263 ENSMZEG00005008283 ENSMZEG00005008301 ENSMZEG00005008329 Eastern happy MODERN SPECIES 14 abcb6a (ENSACLG00000027863) abcb6a (ENSACLG00000027885) cnppd1 (ENSACLG00000027887) ENSACLG00000027888 retreg2 (ENSACLG00000027890) mdh1b (ENSACLG00000027891) ENSACLG00000027894 ENSACLG00000027896 raph1b (ENSACLG00000027897) spp2 (ENSACLG00000027900) alg11 (ENSACLG00000027899) cpb2 (ENSACLG00000027901) zc3h13 (ENSACLG00000027909) rpl31 (ENSACLG00000027911) chst10 (ENSACLG00000027912) MAP4K4 (ENSACLG00000027913) #22 ENSACLG00000027924 ENSACLG00000001047 MCF2L (ENSACLG00000001155) cab39l (ENSACLG00000001540) cdadc1 (ENSACLG00000001587) ENSACLG00000001609 ENSACLG00000001652 arhgef7b (ENSACLG00000001666) ENSACLG00000001793 ENSACLG00000001817 ENSACLG00000001848 CACNB4 (ENSACLG00000001924) SEMA5B (ENSACLG00000001991) kpnb3 (ENSACLG00000002083) atg13 (ENSACLG00000002212) P. nyererei MODERN SPECIES 335 nrp2a (ENSPNYG00000016558) abcb6a (ENSPNYG00000016502) cnppd1 (ENSPNYG00000016487) ENSPNYG00000016453 retreg2 (ENSPNYG00000016414) mdh1b (ENSPNYG00000016342) ENSPNYG00000016302 ENSPNYG00000016292 raph1b (ENSPNYG00000016134) spp2 (ENSPNYG00000016100) alg11 (ENSPNYG00000016075) cpb2 (ENSPNYG00000016049) zc3h13 (ENSPNYG00000016000) rpl31 (ENSPNYG00000015985) chst10 (ENSPNYG00000015962) MAP4K4 (ENSPNYG00000015893) #22 ENSPNYG00000015874 ENSPNYG00000015828 MCF2L (ENSPNYG00000015707) cab39l (ENSPNYG00000015625) cdadc1 (ENSPNYG00000015610) rcbtb1 (ENSPNYG00000015578) ENSPNYG00000015558 tubgcp3 (ENSPNYG00000015478) ATP11A (ENSPNYG00000015407) Lyretail cichlid MODERN SPECIES 422 abcb6a (ENSNBRG00000007882) cnppd1 (ENSNBRG00000007866) ENSNBRG00000007411 retreg2 (ENSNBRG00000007319) mdh1b (ENSNBRG00000007258) ENSNBRG00000007232 ENSNBRG00000007222 raph1b (ENSNBRG00000007182) ENSNBRG00000007138 alg11 (ENSNBRG00000007121) cpb2 (ENSNBRG00000007109) ENSNBRG00000007093 rpl31 (ENSNBRG00000007076) chst10 (ENSNBRG00000007049) ENSNBRG00000007007 ENSNBRG00000006985 #22 ENSNBRG00000006978 RDX (ENSNBRG00000006927) MCF2L (ENSNBRG00000006866) cab39l (ENSNBRG00000006797) cdadc1 (ENSNBRG00000006723) rcbtb1 (ENSNBRG00000006687) ENSNBRG00000006660 tubgcp3 (ENSNBRG00000006602) ATP11A (ENSNBRG00000006492) ENSNBRG00000006414 ENSNBRG00000006386 Nile tilapia MODERN SPECIES 14 nrp2a (ENSONIG00000012186) abcb6a (ENSONIG00000012196) cnppd1 (ENSONIG00000040328) ENSONIG00000012200 retreg2 (ENSONIG00000038099) mdh1b (ENSONIG00000012210) ENSONIG00000012215 ENSONIG00000037064 raph1b (ENSONIG00000012220) spp2 (ENSONIG00000039515) alg11 (ENSONIG00000012226) cpb2 (ENSONIG00000012227) zc3h13 (ENSONIG00000012236) rpl31 (ENSONIG00000033747) chst10 (ENSONIG00000012254) MAP4K4 (ENSONIG00000012256) #22 ENSONIG00000012268 ENSONIG00000012273 MCF2L (ENSONIG00000012277) cab39l (ENSONIG00000012288) cdadc1 (ENSONIG00000012296) rcbtb1 (ENSONIG00000012298) ENSONIG00000012303 tubgcp3 (ENSONIG00000012305) ATP11A (ENSONIG00000012309) SOX1 (ENSONIG00000021020) ENSONIG00000013227 arhgef7b (ENSONIG00000015169) ENSONIG00000015175 ENSONIG00000031938 CACNB4 (ENSONIG00000015177) Midas cichlid MODERN SPECIES 353 nrp2a (ENSACIG00000000266) abcb6a (ENSACIG00000000321) cnppd1 (ENSACIG00000000528) ENSACIG00000000557 retreg2 (ENSACIG00000000674) ENSACIG00000000704 mdh1b (ENSACIG00000000744) ENSACIG00000000837 raph1b (ENSACIG00000000865) spp2 (ENSACIG00000001105) alg11 (ENSACIG00000001151) cpb2 (ENSACIG00000001169) zc3h13 (ENSACIG00000001200) rpl31 (ENSACIG00000001260) chst10 (ENSACIG00000001277) MAP4K4 (ENSACIG00000001297) #22 ENSACIG00000001362 ENSACIG00000001412 MCF2L (ENSACIG00000001448) cab39l (ENSACIG00000001525) cdadc1 (ENSACIG00000001563) Pomacentridae ANCESTRAL SPECIES 71 ENSGT00940000155972.A ENSGT00940000176946.a ENSGT00940000156449.b.a ENSGT00950000183046.a.a.gb ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00940000153534.A ENSGT00390000003758 ENSGT00530000063484.b.b.d.b ENSGT00940000154342.C.re ENSGT00940000154342.C.qe ENSGT00390000016929 ENSGT00940000155466.e.a ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a.b ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00390000018553 ENSGT00940000153514.b.m.b ENSGT00940000166946 Pomacentridae_A ANCESTRAL SPECIES 98 ENSGT00940000155972.A ENSGT00940000176946.a ENSGT00940000156449.b.a ENSGT00950000183046.a.a.gb ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00940000153534.A ENSGT00390000003758 ENSGT00530000063484.b.b.d.b ENSGT00940000154342.C.re ENSGT00940000154342.C.qe ENSGT00390000016929 ENSGT00940000155466.e.a ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 Amphiprion ANCESTRAL SPECIES 192 ENSGT00940000155995.e.a ENSGT00940000155972.A ENSGT00940000176946.a ENSGT00940000156449.b.a ENSGT00950000183046.a.a.gb ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00940000153534.A ENSGT00390000003758 ENSGT00530000063484.b.b.d.b ENSGT00940000154342.C.qe ENSGT00390000016929 ENSGT00940000155466.e.a ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 Clown anemonefish MODERN SPECIES 731 ap1s2 (ENSAOCG00000024111) PHKA2 (ENSAOCG00000024162) ppef1 (ENSAOCG00000024194) RS1 (ENSAOCG00000024210) cdkl5 (ENSAOCG00000024243) SCML2 (ENSAOCG00000024259) NHS (ENSAOCG00000024274) ace2 (ENSAOCG00000001769) ENSAOCG00000024302 zgc:113276 (ENSAOCG00000024316) dmd (ENSAOCG00000024530) gtf3c3 (ENSAOCG00000024580) HECW2 (ENSAOCG00000024590) rpl31 (ENSAOCG00000024591) chst10 (ENSAOCG00000024594) MAP4K4 (ENSAOCG00000024616) #22 GAPDH (ENSAOCG00000024626) Orange clownfish MODERN SPECIES 16 ENSAPEG00000009702 ENSAPEG00000009906 bmpr2a (ENSAPEG00000009919) FAM117B (ENSAPEG00000009980) ical1 (ENSAPEG00000010018) wdr12 (ENSAPEG00000010107) nop58 (ENSAPEG00000010178) ENSAPEG00000010243 tmem47 (ENSAPEG00000010252) ENSAPEG00000010270 dmd (ENSAPEG00000010447) gtf3c3 (ENSAPEG00000011007) HECW2 (ENSAPEG00000011093) rpl31 (ENSAPEG00000011120) chst10 (ENSAPEG00000011160) MAP4K4 (ENSAPEG00000011232) #22 ENSAPEG00000011443 GAPDH (ENSAPEG00000011459) ENSAPEG00000011488 sowahcb (ENSAPEG00000011503) cep70 (ENSAPEG00000011536) adarb1a (ENSAPEG00000011629) slx9 (ENSAPEG00000011677) ENSAPEG00000011685 cnot9 (ENSAPEG00000011704) ENSAPEG00000011757 DONSON (ENSAPEG00000011848) runx1 (ENSAPEG00000011997) ENSAPEG00000012078 ENSAPEG00000012095 ENSAPEG00000012131 Spiny chromis MODERN SPECIES 844 dmd (ENSAPOG00000013339) gtf3c3 (ENSAPOG00000012620) HECW2 (ENSAPOG00000012515) rpl31 (ENSAPOG00000012374) chst10 (ENSAPOG00000012348) ENSAPOG00000012315 #22 Bicolor damselfish MODERN SPECIES 456 rpl31 (ENSSPAG00000009164) chst10 (ENSSPAG00000009171) MAP4K4 (ENSSPAG00000009217) #22 ENSSPAG00000009485 RDX (ENSSPAG00000009513) MCF2L (ENSSPAG00000009584) cab39l (ENSSPAG00000009771) cdadc1 (ENSSPAG00000009801) rcbtb1 (ENSSPAG00000009819) FGF14 (ENSSPAG00000009847) tubgcp3 (ENSSPAG00000009874) ATP11A (ENSSPAG00000009986) SOX1 (ENSSPAG00000010125) arhgef7b (ENSSPAG00000010140) ENSSPAG00000010212 unc50 (ENSSPAG00000010252) ndufs1 (ENSSPAG00000010291) ENSSPAG00000010352 Atherinomorphae ANCESTRAL SPECIES 24 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00390000018553 ENSGT00940000153514.b.m.b Oryzias ANCESTRAL SPECIES 26 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT00390000008033 ENSGT00390000013073 ENSGT00940000165208.a ENSGT00390000008902.jb ENSGT00530000063252.a.b.a.a ENSGT00940000167257 ENSGT00940000156815 ENSGT00940000159090 ENSGT00940000163827.b ENSGT00940000166518 ENSGT00940000154517.nb ENSGT00390000013877 ENSGT01060000248589.C.g.b ENSGT00940000155600.a.a.h Oryzias_b ANCESTRAL SPECIES 76 ENSGT00950000183214.a.b.a.b.f.b.b ENSGT00940000155270.i.b ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT00390000008033 ENSGT00390000013073 ENSGT00940000165208.a ENSGT00390000008902.jb ENSGT00530000063252.a.b.a.a ENSGT00940000167257 ENSGT00940000156815 ENSGT00940000159090 ENSGT00940000163827.b Indian medaka MODERN SPECIES 24 ENSOMEG00000007428 nrp2a (ENSOMEG00000007409) abcb6a (ENSOMEG00000007360) cnppd1 (ENSOMEG00000007313) ENSOMEG00000007283 retreg2 (ENSOMEG00000007242) mdh1b (ENSOMEG00000007226) ENSOMEG00000007199 ENSOMEG00000007170 raph1b (ENSOMEG00000007149) alg11 (ENSOMEG00000007110) cpb2 (ENSOMEG00000007089) zc3h13 (ENSOMEG00000007044) rpl31 (ENSOMEG00000006975) chst10 (ENSOMEG00000006938) MAP4K4 (ENSOMEG00000006878) #22 ENSOMEG00000006666 KYNU (ENSOMEG00000006650) n6amt1 (ENSOMEG00000006621) jam2a (ENSOMEG00000006601) atp5pf (ENSOMEG00000006555) ENSOMEG00000006540 ENSOMEG00000006531 APP (ENSOMEG00000006503) cyyr1 (ENSOMEG00000006402) ADAMTS1 (ENSOMEG00000006388) ADAMTS5 (ENSOMEG00000006372) ENSOMEG00000006332 ENSOMEG00000006145 ENSOMEG00000006135 ENSOMEG00000006121 Javanese ricefish MODERN SPECIES 11 ENSOJAG00000008098 ENSOJAG00000008044 ENSOJAG00000008014 nrp2a (ENSOJAG00000005308) cnppd1 (ENSOJAG00000004998) ENSOJAG00000004832 retreg2 (ENSOJAG00000004813) mdh1b (ENSOJAG00000004804) ENSOJAG00000004773 ENSOJAG00000004700 cpb2 (ENSOJAG00000004393) ENSOJAG00000004385 rpl31 (ENSOJAG00000004333) alg11 (ENSOJAG00000004306) chst10 (ENSOJAG00000004285) ENSOJAG00000003415 #22 ENSOJAG00000003322 KYNU (ENSOJAG00000003284) n6amt1 (ENSOJAG00000003275) jam2a (ENSOJAG00000003256) atp5pf (ENSOJAG00000003243) APP (ENSOJAG00000002973) cyyr1 (ENSOJAG00000002897) ADAMTS1 (ENSOJAG00000002887) ADAMTS5 (ENSOJAG00000002877) ENSOJAG00000002806 ENSOJAG00000002786 ENSOJAG00000002781 ENSOJAG00000002757 ENSOJAG00000002750 ENSOJAG00000002655 Oryzias_a ANCESTRAL SPECIES 28 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT00390000008033 ENSGT00390000013073 ENSGT00940000165208.a ENSGT00390000008902.jb ENSGT00530000063252.a.b.a.a ENSGT00940000167257 ENSGT00940000156815 ENSGT00940000159090 ENSGT00940000163827.b ENSGT00940000166518 ENSGT00940000154517.nb ENSGT00390000013877 ENSGT01060000248589.C.g.b ENSGT00940000155600.a.a.h Chinese medaka MODERN SPECIES 23 mbnl2 (ENSOSIG00000013683) ENSOSIG00000013793 nrp2a (ENSOSIG00000013827) abcb6a (ENSOSIG00000000003) cnppd1 (ENSOSIG00000000013) retreg2 (ENSOSIG00000000032) ENSOSIG00000000045 ENSOSIG00000000052 raph1b (ENSOSIG00000000169) alg11 (ENSOSIG00000000590) cpb2 (ENSOSIG00000000591) ENSOSIG00000000592 ENSOSIG00000000594 rpl31 (ENSOSIG00000000598) chst10 (ENSOSIG00000000602) ENSOSIG00000000647 #22 ENSOSIG00000010322 KYNU (ENSOSIG00000010327) n6amt1 (ENSOSIG00000010348) jam2a (ENSOSIG00000010350) atp5pf (ENSOSIG00000010352) APP (ENSOSIG00000010421) cyyr1 (ENSOSIG00000017882) ADAMTS1 (ENSOSIG00000017885) ADAMTS5 (ENSOSIG00000017888) ENSOSIG00000017893 FUNDC1 (ENSOSIG00000017905) kdm6al (ENSOSIG00000018130) cenpl (ENSOSIG00000020818) caskb (ENSOSIG00000020825) il1rapl1b (ENSOSIG00000020922) Japanese Medaka HdrR MODERN SPECIES 11 ENSORLG00000025601 nrp2a (ENSORLG00000005395) abcb6a (ENSORLG00000005333) cnppd1 (ENSORLG00000005312) ENSORLG00000005307 retreg2 (ENSORLG00000005285) mdh1b (ENSORLG00000005272) ENSORLG00000005262 ENSORLG00000005254 raph1b (ENSORLG00000005250) alg11 (ENSORLG00000005232) cpb2 (ENSORLG00000005225) zc3h13 (ENSORLG00000005201) rpl31 (ENSORLG00000005178) chst10 (ENSORLG00000005171) MAP4K4 (ENSORLG00000005156) #22 ENSORLG00000029243 KYNU (ENSORLG00000005074) n6amt1 (ENSORLG00000005038) jam2a (ENSORLG00000029786) atp5pf (ENSORLG00000028251) APP (ENSORLG00000005026) cyyr1 (ENSORLG00000029132) adamts1 (ENSORLG00000004990) ADAMTS5 (ENSORLG00000004966) ENSORLG00000023243 ENSORLG00000004948 kdm6al (ENSORLG00000004864) FUNDC1 (ENSORLG00000030458) cenpl (ENSORLG00000004817) ENSORLG00000004812 Cyprinodontiformes ANCESTRAL SPECIES 25 ENSGT00950000183214.a.b.a.b.f.b.b ENSGT00940000155270.i.b ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00390000018553 ENSGT00940000153514.b.m.b Aplocheiloidei ANCESTRAL SPECIES 37 ENSGT00950000183214.a.b.a.b.f.b.b ENSGT00940000155270.i.b ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00550000075118.k ENSGT00940000159160 ENSGT00950000183030 ENSGT00730000111163 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00390000018553 ENSGT00940000153514.b.m.b Mangrove rivulus MODERN SPECIES 132 ENSKMAG00000012633 ENSKMAG00000012577 GPR180 (ENSKMAG00000012532) SMIM11 (ENSKMAG00000012511) ENSKMAG00000012423 SEMA5B (ENSKMAG00000012302) kpnb3 (ENSKMAG00000012235) atg13 (ENSKMAG00000012194) HARBI1 (ENSKMAG00000012173) creb3l1 (ENSKMAG00000012148) ndufs1 (ENSKMAG00000012091) unc50 (ENSKMAG00000012064) rpl31 (ENSKMAG00000011989) ENSKMAG00000011945 chst10 (ENSKMAG00000011926) MAP4K4 (ENSKMAG00000011765) #22 ENSKMAG00000011694 ENSKMAG00000011652 ENSKMAG00000011510 cab39l (ENSKMAG00000011414) cdadc1 (ENSKMAG00000011381) rcbtb1 (ENSKMAG00000011318) FGF14 (ENSKMAG00000011283) tubgcp3 (ENSKMAG00000011185) ENSKMAG00000011159 ATP11A (ENSKMAG00000011106) SOX1 (ENSKMAG00000011088) arhgef7b (ENSKMAG00000010994) ENSKMAG00000010829 ENSKMAG00000010754 zc3h13 (ENSKMAG00000010701) Turquoise killifish MODERN SPECIES 1615 ENSNFUG00015022718 NRP2 (ENSNFUG00015022587) ENSNFUG00015022569 abcb6a (ENSNFUG00015021916) cnppd1 (ENSNFUG00015021868) ENSNFUG00015021844 FAM134A (ENSNFUG00015021837) mdh1b (ENSNFUG00015021836) FASTKD2 (ENSNFUG00015021833) ENSNFUG00015021828 raph1b (ENSNFUG00015021263) ALG11 (ENSNFUG00015021241) cpb2 (ENSNFUG00015021229) ZC3H13 (ENSNFUG00015021222) chst10 (ENSNFUG00015021219) MAP4K4 (ENSNFUG00015020909) #22 ZC3H12C (ENSNFUG00015020892) ENSNFUG00015020544 ENSNFUG00015020539 MCF2L (ENSNFUG00015020529) cab39l (ENSNFUG00015020524) CDADC1 (ENSNFUG00015020521) rcbtb1 (ENSNFUG00015020504) ENSNFUG00015020497 Nfu_g_1_008660 (ENSNFUG00015020483) tubgcp3 (ENSNFUG00015020355) ATP11A (ENSNFUG00015017359) Nfu_g_1_008684 (ENSNFUG00015017237) LINGO1A (ENSNFUG00015017235) ENSNFUG00015017227 ENSNFUG00015017224 Cyprinodontoidei ANCESTRAL SPECIES 26 ENSGT00950000183214.a.b.a.b.f.b.b ENSGT00940000155270.i.b ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00390000018553 ENSGT00940000153514.b.m.b Poeciliinae ANCESTRAL SPECIES 23 ENSGT00950000183214.a.b.a.b.f.b.b ENSGT00940000155270.i.b.e ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00390000018553 ENSGT00940000153514.b.m.b Poecilia ANCESTRAL SPECIES 30 ENSGT00950000183214.a.b.a.b.f.b.b ENSGT00940000155270.i.b.e ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00390000018553 ENSGT00940000153514.b.m.b NAME_6 ANCESTRAL SPECIES 58 ENSGT00950000183214.a.b.a.b.f.b.b ENSGT00940000155270.i.b.e ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00390000018553 ENSGT00940000153514.b.m.b Amazon molly MODERN SPECIES 424 ENSPFOG00000003029 nrp2a (ENSPFOG00000003190) abcb6a (ENSPFOG00000003536) cnppd1 (ENSPFOG00000003799) ENSPFOG00000003866 retreg2 (ENSPFOG00000003980) mdh1b (ENSPFOG00000004105) ENSPFOG00000004234 ENSPFOG00000004383 raph1b (ENSPFOG00000004388) alg11 (ENSPFOG00000004511) cpb2 (ENSPFOG00000004589) zc3h13 (ENSPFOG00000005039) rpl31 (ENSPFOG00000005045) chst10 (ENSPFOG00000005122) MAP4K4 (ENSPFOG00000005245) #22 ENSPFOG00000005817 RDX (ENSPFOG00000005891) MCF2L (ENSPFOG00000006017) cab39l (ENSPFOG00000006848) cdadc1 (ENSPFOG00000006959) rcbtb1 (ENSPFOG00000007065) ENSPFOG00000007177 tubgcp3 (ENSPFOG00000007253) ATP11A (ENSPFOG00000007727) SOX1 (ENSPFOG00000008756) arhgef7b (ENSPFOG00000008784) ENSPFOG00000009145 ENSPFOG00000009665 unc50 (ENSPFOG00000009782) ndufs1 (ENSPFOG00000009828) Sailfin molly MODERN SPECIES 431 nrp2a (ENSPLAG00000014628) abcb6a (ENSPLAG00000014606) ENSPLAG00000014551 cnppd1 (ENSPLAG00000014321) retreg2 (ENSPLAG00000014309) mdh1b (ENSPLAG00000014290) ENSPLAG00000014235 ENSPLAG00000014230 raph1b (ENSPLAG00000014205) alg11 (ENSPLAG00000014143) cpb2 (ENSPLAG00000014129) zc3h13 (ENSPLAG00000014095) chst10 (ENSPLAG00000014083) rpl31 (ENSPLAG00000000326) MAP4K4 (ENSPLAG00000013930) #22 ENSPLAG00000009867 RDX (ENSPLAG00000009857) MCF2L (ENSPLAG00000009785) cab39l (ENSPLAG00000009362) cdadc1 (ENSPLAG00000009337) rcbtb1 (ENSPLAG00000009299) Guppy MODERN SPECIES 450 ENSPREG00000009986 nrp2a (ENSPREG00000010035) abcb6a (ENSPREG00000010083) cnppd1 (ENSPREG00000010133) ENSPREG00000010158 retreg2 (ENSPREG00000010208) mdh1b (ENSPREG00000010234) ENSPREG00000010256 ENSPREG00000010293 raph1b (ENSPREG00000010336) alg11 (ENSPREG00000010439) cpb2 (ENSPREG00000010459) zc3h13 (ENSPREG00000010526) rpl31 (ENSPREG00000010564) chst10 (ENSPREG00000010751) MAP4K4 (ENSPREG00000010791) #22 ENSPREG00000010838 RDX (ENSPREG00000010856) MCF2L (ENSPREG00000010906) cab39l (ENSPREG00000011055) cdadc1 (ENSPREG00000011072) rcbtb1 (ENSPREG00000011094) ENSPREG00000011113 FGF14 (ENSPREG00000011119) tubgcp3 (ENSPREG00000011155) ATP11A (ENSPREG00000011298) SOX1 (ENSPREG00000011495) arhgef7b (ENSPREG00000011503) ENSPREG00000011543 unc50 (ENSPREG00000011559) ENSPREG00000011576 Platyfish MODERN SPECIES 16 ENSXMAG00000012604 nrp2a (ENSXMAG00000012521) abcb6a (ENSXMAG00000003010) cnppd1 (ENSXMAG00000003024) ENSXMAG00000003025 retreg2 (ENSXMAG00000025935) mdh1b (ENSXMAG00000012494) ENSXMAG00000012482 ENSXMAG00000024149 raph1b (ENSXMAG00000012467) alg11 (ENSXMAG00000012465) cpb2 (ENSXMAG00000012438) zc3h13 (ENSXMAG00000012423) rpl31 (ENSXMAG00000012419) chst10 (ENSXMAG00000028772) MAP4K4 (ENSXMAG00000012364) #22 ENSXMAG00000027171 RDX (ENSXMAG00000012314) MCF2L (ENSXMAG00000012216) cab39l (ENSXMAG00000017334) cdadc1 (ENSXMAG00000012166) rcbtb1 (ENSXMAG00000013757) ENSXMAG00000026344 ENSXMAG00000021861 ENSXMAG00000021122 ENSXMAG00000012158 tubgcp3 (ENSXMAG00000026366) ATP11A (ENSXMAG00000012027) SOX1 (ENSXMAG00000019447) arhgef7b (ENSXMAG00000004492) ENSXMAG00000004406 NAME_4 ANCESTRAL SPECIES 76 ENSGT00950000183214.a.b.a.b.f.b.b ENSGT00940000155270.i.b ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000157874.q.a ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000156984.a.a ENSGT00940000157872 ENSGT00940000157849.n.c ENSGT00940000162479.a ENSGT00940000155360.B.k ENSGT00940000157269.a.b ENSGT00940000164275.f.d ENSGT00390000018553 ENSGT00940000153514.b.m.b Sheepshead minnow MODERN SPECIES 2177 ENSCVAG00000013636 #22 Mummichog MODERN SPECIES 980 nrp2a (ENSFHEG00000020462) abcb6a (ENSFHEG00000020529) cnppd1 (ENSFHEG00000020537) ENSFHEG00000020542 retreg2 (ENSFHEG00000000729) mdh1b (ENSFHEG00000020591) ENSFHEG00000020606 ENSFHEG00000020630 raph1b (ENSFHEG00000020732) alg11 (ENSFHEG00000020747) cpb2 (ENSFHEG00000020769) ENSFHEG00000020784 ENSFHEG00000020795 rpl31 (ENSFHEG00000020810) chst10 (ENSFHEG00000020855) MAP4K4 (ENSFHEG00000021093) #22 ENSFHEG00000021225 RDX (ENSFHEG00000021311) ENSFHEG00000021320 ENSFHEG00000021973 cab39l (ENSFHEG00000022080) cdadc1 (ENSFHEG00000022087) rcbtb1 (ENSFHEG00000000545) FGF14 (ENSFHEG00000022154) tubgcp3 (ENSFHEG00000022234) ATP11A (ENSFHEG00000022327) SOX1 (ENSFHEG00000022335) arhgef7b (ENSFHEG00000022472) ENSFHEG00000022659 ENSFHEG00000022674 unc50 (ENSFHEG00000022689) Pinecone sodierfish MODERN SPECIES 11 abcb6a (ENSMMDG00005021717) cnppd1 (ENSMMDG00005021702) ENSMMDG00005021587 retreg2 (ENSMMDG00005021581) mdh1b (ENSMMDG00005021579) ENSMMDG00005021577 ENSMMDG00005021573 raph1b (ENSMMDG00005021460) spp2 (ENSMMDG00005021455) cpb2 (ENSMMDG00005021453) alg11 (ENSMMDG00005021449) cpb2 (ENSMMDG00005021445) zc3h13 (ENSMMDG00005021439) RPL31 (ENSMMDG00005021436) chst10 (ENSMMDG00005021433) MAP4K4 (ENSMMDG00005021003) #22 ENSMMDG00005020982 ENSMMDG00005019773 ENSMMDG00005017978 ENSMMDG00005017933 ENSMMDG00005017931 VANGL1 (ENSMMDG00005017927) ENSMMDG00005017920 poglut1 (ENSMMDG00005017914) timmdc1 (ENSMMDG00005017913) abcc4 (ENSMMDG00005017896) abcc4 (ENSMMDG00005008910) cldn10a (ENSMMDG00005008793) ENSMMDG00005008790 ENSMMDG00005008788 ENSMMDG00005008785 Cod MODERN SPECIES 17 ENSGMOG00000000567 ENSGMOG00000005580 abcb6a (ENSGMOG00000004283) cnppd1 (ENSGMOG00000004320) ENSGMOG00000004338 ENSGMOG00000034071 retreg2 (ENSGMOG00000004356) mdh1b (ENSGMOG00000031708) ENSGMOG00000026580 ENSGMOG00000034282 ENSGMOG00000000724 cpb2 (ENSGMOG00000000707) alg11 (ENSGMOG00000000693) spp2 (ENSGMOG00000000657) raph1b (ENSGMOG00000024998) ENSGMOG00000001433 #22 ENSGMOG00000031689 ENSGMOG00000036262 ENSGMOG00000015567 ENSGMOG00000024541 ENSGMOG00000034277 ENSGMOG00000035279 ENSGMOG00000026762 ENSGMOG00000030143 ENSGMOG00000034284 ENSGMOG00000024387 ENSGMOG00000029948 ENSGMOG00000025694 ENSGMOG00000023691 ENSGMOG00000030149 ENSGMOG00000031279 Protacanthopterygii ANCESTRAL SPECIES 27 ENSGT00950000183052.b.c.b.a.e.a ENSGT00390000000673.a.b ENSGT00940000155099.k.b ENSGT00950000183009.db.a ENSGT00940000157267 ENSGT00510000047718.c ENSGT00950000182895.a.b.v.k ENSGT00950000182895.a.b.v.j.a ENSGT00390000004977.d.b ENSGT00940000164909.e.b ENSGT00390000014839.b ENSGT00440000033329.b.a.a.c ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.q.a ENSGT00940000163999.a.c.a.b ENSGT00940000161095 ENSGT00940000163999.a.c.b.b ENSGT00390000012496.a.c ENSGT00390000019377.b.e ENSGT00940000172275 ENSGT00390000009178 ENSGT00980000198666 ENSGT00940000158283 ENSGT00390000013817 ENSGT00940000156862 ENSGT00940000153931.b.b ENSGT00940000155232.t.b.a Salmoninae ANCESTRAL SPECIES 308 ENSGT00390000014839.b.e ENSGT00440000033329.b.a.a.c.a ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b.q.a.a ENSGT00940000163999.a.c.a.b.a.b ENSGT00940000163999.a.c.a.b.a.a.a ENSGT00940000159316.yb.b.b ENSGT01090000260082.d.a.b.q.a.b ENSGT00390000009178 ENSGT00940000164246.C.d.b.b ENSGT00940000164480.a.a.g.a.a.a ENSGT00940000164480.a.a.g.a.a.b ENSGT00390000012496.a.c.b ENSGT00390000019377.b.e.c ENSGT00940000158283 ENSGT00390000013817.d ENSGT00940000153931.b.b.f.b Huchen DUPLICATION Huchen MODERN SPECIES 172 ENSHHUG00000030916 atg9a (ENSHHUG00000030907) ENSHHUG00000030883 MAP4K4 (ENSHHUG00000029955) #22 ENSHHUG00000029936 ENSHHUG00000029809 tlr22 (ENSHHUG00000029801) tlr22 (ENSHHUG00000029734) tlr22 (ENSHHUG00000029731) tlr22 (ENSHHUG00000029722) ENSHHUG00000029490 ENSHHUG00000029488 ENSHHUG00000029487 ENSHHUG00000029469 ENSHHUG00000029378 poglut1 (ENSHHUG00000029368) timmdc1 (ENSHHUG00000029362) abcc4 (ENSHHUG00000029338) abcc4 (ENSHHUG00000028932) Huchen MODERN SPECIES 186 ENSHHUG00000027254 atg9a (ENSHHUG00000027230) ENSHHUG00000027223 ENSHHUG00000026493 #22 ENSHHUG00000026476 ENSHHUG00000026247 ENSHHUG00000026235 ENSHHUG00000026233 VANGL1 (ENSHHUG00000026222) ENSHHUG00000026172 poglut1 (ENSHHUG00000026162) timmdc1 (ENSHHUG00000026156) abcc4 (ENSHHUG00000025036) psen1 (ENSHHUG00000025010) abcc4 (ENSHHUG00000024486) ENSHHUG00000024468 ENSHHUG00000024461 ENSHHUG00000024454 dzip1 (ENSHHUG00000024441) Salmoninae_a ANCESTRAL SPECIES 49 ENSGT00390000000673.a.b.c ENSGT00940000155099.k.b.e.b.a ENSGT00950000183009.db.a.a.a ENSGT00940000155489.a.d ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00940000157267.a ENSGT00510000047718.c ENSGT00950000182895.a.b.v.j.a.b ENSGT00390000004977.d.b ENSGT00940000164909.e.b ENSGT00390000014839.b.f.b ENSGT00940000176997 ENSGT00390000014839.b.f.a ENSGT00440000033329.b.a.a.c.b ENSGT00940000155063.a.b #22 ENSGT00940000155107.b.a.f ENSGT01090000260082.d.a.b.q.a.b ENSGT00390000009178.g ENSGT00940000164246.C.d.b.b ENSGT00940000164480.a.a.g.a.a.a ENSGT00940000164480.a.a.g.a.a.b ENSGT00390000012496.a.c.b ENSGT00390000019377.b.e.c ENSGT00940000158283 ENSGT00390000013817.d ENSGT00940000153931.b.b.f.b ENSGT00940000153931.b.b.e.a ENSGT00940000166422.a ENSGT00940000155232.t.a.b.b.j ENSGT00940000156862.x Salmo DUPLICATION Salmo ANCESTRAL SPECIES 41 ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.a.b ENSGT00390000000673.a.b.d ENSGT00940000155099.k.b.e.b.b ENSGT00950000183009.db.a.a.b ENSGT00940000155489.a.c.b ENSGT00940000157267.b ENSGT01060000250127 ENSGT00540000073890.q.a ENSGT00940000164904.a.g.b.a ENSGT00950000182895.a.a.a.b ENSGT00950000182895.a.b.v.j.a.a ENSGT00390000004977.d.b.f ENSGT00940000164909.e.b.k ENSGT00390000014839.b.f.a ENSGT00440000033329.b.a.a.c.b ENSGT00940000155063.a.b.c #22 ENSGT00940000155107.b.a.f ENSGT01090000260082.d.a.b.q.a.b ENSGT00390000009178.g ENSGT00980000198666 ENSGT00940000164480.a.a.g.a.b ENSGT00390000012496.a.c.b ENSGT00390000019377.b.e.d.b ENSGT00940000172275 ENSGT00390000013817.c ENSGT00940000153931.b.b.f.a.a ENSGT00940000153931.b.b.e.b ENSGT00940000155232.t.b.a.d ENSGT00940000166422.b ENSGT00940000155232.t.a.b.b.i ENSGT00940000156862.w Atlantic salmon MODERN SPECIES 8 uggt1 (ENSSSAG00000072953) ENSSSAG00000072938 ENSSSAG00000072947 ENSSSAG00000119394 ENSSSAG00000121488 ENSSSAG00000101873 ENSSSAG00000072836 ENSSSAG00000072819 ENSSSAG00000072814 ENSSSAG00000072729 ENSSSAG00000072718 ENSSSAG00000072622 ENSSSAG00000072552 ENSSSAG00000072544 ENSSSAG00000078373 ENSSSAG00000008597 #22 ENSSSAG00000007990 ENSSSAG00000006617 ENSSSAG00000006327 ENSSSAG00000006277 ENSSSAG00000088817 ENSSSAG00000066489 ENSSSAG00000006094 ENSSSAG00000006024 ENSSSAG00000005996 ENSSSAG00000091740 ENSSSAG00000081627 abcc4 (ENSSSAG00000081593) cldn10a (ENSSSAG00000115005) ENSSSAG00000081545 ENSSSAG00000081544 River trout MODERN SPECIES 32 uggt1 (ENSSTUG00000042640) ENSSTUG00000043329 ENSSTUG00000043340 ENSSTUG00000043355 ENSSTUG00000043365 ENSSTUG00000043388 ENSSTUG00000043590 TRA2B (ENSSTUG00000043611) ENSSTUG00000043721 ENSSTUG00000043758 ENSSTUG00000044153 ENSSTUG00000044174 ENSSTUG00000044215 atg9a (ENSSTUG00000045300) ENSSTUG00000045341 ENSSTUG00000045384 #22 ENSSTUG00000046182 ENSSTUG00000046228 ENSSTUG00000046743 ENSSTUG00000047113 ENSSTUG00000047116 ENSSTUG00000047123 ENSSTUG00000047139 ENSSTUG00000047226 ENSSTUG00000047234 abcc4 (ENSSTUG00000047308) ENSSTUG00000048420 abcc4 (ENSSTUG00000048570) cldn10a (ENSSTUG00000049365) ENSSTUG00000049380 ENSSTUG00000049381 Salmo ANCESTRAL SPECIES 48 ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.b ENSGT00940000163513.d ENSGT00390000000673.a.b.c ENSGT00940000155099.k.b.e.b.a ENSGT00950000183009.db.a.a.a ENSGT00940000155489.a.d ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00940000157267.a ENSGT00510000047718.c ENSGT00950000182895.a.b.v.j.a.b ENSGT00390000004977.d.b.e ENSGT00940000164909.e.b.l ENSGT00390000014839.b.f.b.a ENSGT00440000033329.b.a.a.c.a ENSGT00940000155063.a.b.d #22 ENSGT01090000260082.d.a.b.q.a.a ENSGT00940000163999.a.c.a.b.a.b ENSGT00940000163999.a.c.a.b.a.a.a ENSGT00940000163999.a.c.a.b.a.a.b ENSGT00390000009178.h ENSGT00940000164246.C.d.b.a ENSGT00390000012496.a.c.a.a ENSGT00390000019377.b.e.c ENSGT00940000158283 ENSGT00390000013817.d ENSGT00940000153931.b.b.f.a.b ENSGT00940000153931.b.b.f.b ENSGT00940000153931.b.b.e.a ENSGT00940000155232.t.b.a.c ENSGT00940000166422.a Atlantic salmon MODERN SPECIES 7 ENSSSAG00000092203 ENSSSAG00000078811 ENSSSAG00000078778 ENSSSAG00000078759 ENSSSAG00000078718 ENSSSAG00000083359 ENSSSAG00000072765 ENSSSAG00000078698 ENSSSAG00000078620 ENSSSAG00000078597 ENSSSAG00000078591 ENSSSAG00000111098 ENSSSAG00000078456 ENSSSAG00000078382 ENSSSAG00000114816 ENSSSAG00000067494 #22 ENSSSAG00000066692 ENSSSAG00000066649 ENSSSAG00000088381 ENSSSAG00000066641 ENSSSAG00000094502 ENSSSAG00000017255 ENSSSAG00000066645 ENSSSAG00000066499 ENSSSAG00000066492 ENSSSAG00000114461 ENSSSAG00000006259 casq1 (ENSSSAG00000066333) poglut1 (ENSSSAG00000066149) cc001 (ENSSSAG00000066134) ENSSSAG00000105015 River trout MODERN SPECIES 36 ENSSTUG00000050395 ENSSTUG00000050394 ENSSTUG00000050390 ENSSTUG00000050379 ENSSTUG00000050370 TRA2B (ENSSTUG00000050364) ENSSTUG00000050361 zgc:112416 (ENSSTUG00000050353) ENSSTUG00000050347 TSPEAR (ENSSTUG00000050325) ENSSTUG00000050311 ENSSTUG00000050304 ENSSTUG00000050258 atg9a (ENSSTUG00000050237) ENSSTUG00000050230 ENSSTUG00000050054 #22 ENSSTUG00000049993 tlr22 (ENSSTUG00000049985) tlr22 (ENSSTUG00000049983) tlr22 (ENSSTUG00000049980) ENSSTUG00000049977 ENSSTUG00000049974 ENSSTUG00000049972 VANGL1 (ENSSTUG00000049968) ENSSTUG00000049952 poglut1 (ENSSTUG00000049946) timmdc1 (ENSSTUG00000049944) abcc4 (ENSSTUG00000049552) abcc4 (ENSSTUG00000047816) abcc4 (ENSSTUG00000044947) cldn10a (ENSSTUG00000044812) Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 49 ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.a ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.b ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.a.b ENSGT00390000000673.a.b.d ENSGT00940000155099.k.b.e.b.b ENSGT00950000183009.db.a.b.b ENSGT00940000155489.a.c.b ENSGT00730000110871.a.a.a.b ENSGT00940000157267.b ENSGT00950000182895.a.b.v.j.a.b ENSGT00390000004977.d.b ENSGT00940000164909.e.b.i ENSGT00390000014839.b.f.b ENSGT00390000014839.b.f.a ENSGT00440000033329.b.a.a.c.b ENSGT00940000155063.a.b.e #22 ENSGT00940000155107.b.a.f ENSGT01090000260082.d.a.b.q.a.b ENSGT00390000009178.g ENSGT00980000198666 ENSGT00940000164246.C.d.b.b ENSGT00940000164480.a.a.g.a.a.a ENSGT00390000012496.a.c.b.b.b ENSGT00390000019377.b.e.d.a.b ENSGT00390000019377.b.e.c ENSGT00940000158283 ENSGT00390000013817.d ENSGT00940000153931.b.b.f.b ENSGT00940000153931.b.b.e.a ENSGT00940000155232.t.b.a.e ENSGT00940000166422.a Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00940000166763.d.b ENSGT00950000183071.a.a.b.c.a.b.b ENSGT00390000004600.b.a.g ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.a ENSGT00390000000673.a.b.d ENSGT00940000155099.k.b.e.b.b ENSGT00950000183009.db.a.b.b ENSGT00940000155489.a.c.b ENSGT00730000110871.a.a.a.b ENSGT00940000157267.b ENSGT00950000182895.a.b.v.j.a.b ENSGT00390000004977.d.b ENSGT00940000176997 ENSGT00390000014839.b.f.a ENSGT00440000033329.b.a.a.c.b ENSGT00940000155063.a.b.e #22 ENSGT00940000155107.b.a.f ENSGT01090000260082.d.a.b.q.a.b ENSGT00390000009178.g ENSGT00980000198666 ENSGT00940000164480.a.a.g.b ENSGT00390000012496.a.c.b.b.b ENSGT00390000019377.b.e.d.a.a ENSGT00390000019377.b.e.c ENSGT00940000158283 ENSGT00390000013817.d ENSGT00940000153931.b.b.f.b ENSGT00940000153931.b.b.e.a ENSGT00940000155232.t.b.a.e ENSGT00940000166422.a ENSGT00940000155232.t.a.b.b.j Chinook salmon MODERN SPECIES 31 ENSOTSG00005024139 ENSOTSG00005024141 ENSOTSG00005024142 ENSOTSG00005024143 zgc:101744 (ENSOTSG00005024144) ENSOTSG00005024145 ENSOTSG00005024146 ENSOTSG00005024147 CARTPT (ENSOTSG00005024148) ENSOTSG00005024150 ENSOTSG00005024151 NRDC (ENSOTSG00005024162) ENSOTSG00005024736 atg9a (ENSOTSG00005024738) ENSOTSG00005024787 ENSOTSG00005024793 #22 ENSOTSG00005025912 ENSOTSG00005025917 ENSOTSG00005028925 ENSOTSG00005029401 ENSOTSG00005029402 ENSOTSG00005029403 ENSOTSG00005029410 ENSOTSG00005029895 ENSOTSG00005029896 abcc4 (ENSOTSG00005029906) abcc4 (ENSOTSG00005032005) cldn10a (ENSOTSG00005040988) ENSOTSG00005040990 ENSOTSG00005040991 dzip1 (ENSOTSG00005040992) Coho salmon MODERN SPECIES 25 ENSOKIG00005029574 ENSOKIG00005029596 ENSOKIG00005029607 ENSOKIG00005029627 ENSOKIG00005029647 ENSOKIG00005029825 TRA2B (ENSOKIG00005029943) ENSOKIG00005030068 ENSOKIG00005030481 ENSOKIG00005031012 ENSOKIG00005031101 ENSOKIG00005031163 ENSOKIG00005031464 atg9a (ENSOKIG00005031492) ENSOKIG00005031604 ENSOKIG00005031728 #22 ENSOKIG00005033595 ENSOKIG00005033685 ENSOKIG00005034452 ENSOKIG00005035334 ENSOKIG00005035364 VANGL1 (ENSOKIG00005035379) ENSOKIG00005035436 POGLUT1 (ENSOKIG00005035758) ENSOKIG00005035989 ABCC4 (ENSOKIG00005036027) abcc4 (ENSOKIG00005036908) cldn10a (ENSOKIG00005039996) ENSOKIG00005040006 dzip1 (ENSOKIG00005040046) ENSOKIG00005040074 Rainbow trout MODERN SPECIES 28 ENSOMYG00000054008 uggt1 (ENSOMYG00000006857) ENSOMYG00000007103 ENSOMYG00000056207 OLA1 (ENSOMYG00000007476) ENSOMYG00000007652 ENSOMYG00000007737 ENSOMYG00000007792 ENSOMYG00000029816 ENSOMYG00000030120 ENSOMYG00000030155 ENSOMYG00000077588 ENSOMYG00000055704 ENSOMYG00000030271 ENSOMYG00000030561 ENSOMYG00000030736 #22 ENSOMYG00000030884 ENSOMYG00000031214 ENSOMYG00000033385 ENSOMYG00000035136 ENSOMYG00000057623 ENSOMYG00000035142 ENSOMYG00000035252 ENSOMYG00000035916 ENSOMYG00000068793 ENSOMYG00000036403 abcc4 (ENSOMYG00000038670) ENSOMYG00000052190 cldn10a (ENSOMYG00000056385) ENSOMYG00000039815 ENSOMYG00000039825 Oncorhynchus ANCESTRAL SPECIES 70 ENSGT00950000183071.a.a.b.c.a.b.a ENSGT00390000004600.b.a.h ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.b ENSGT00940000163513.d ENSGT00390000000673.a.b.c ENSGT00940000155099.k.b.e.a ENSGT00950000183009.db.a.b.a ENSGT00940000155489.a.d ENSGT00390000011514 ENSGT00940000157267.a ENSGT00510000047718.c ENSGT00950000182895.a.b.v.j.a.a ENSGT00940000164909.e.b.j ENSGT00390000014839.b.e ENSGT00440000033329.b.a.a.c.a ENSGT00940000155063.a.b.f #22 ENSGT00940000155107.b.a.e ENSGT01090000260082.d.a.b.q.a.a ENSGT00940000163999.a.c.a.b.a.b.e.a ENSGT00940000163999.a.c.a.b.a.a.b ENSGT00390000009178.h ENSGT00940000164480.a.a.g.a.a.b ENSGT00390000012496.a.c.b.b.a Rainbow trout MODERN SPECIES 9 uggt1 (ENSOMYG00000030624) ENSOMYG00000031247 ENSOMYG00000031259 ENSOMYG00000031275 ENSOMYG00000031318 ENSOMYG00000031443 ENSOMYG00000031530 ENSOMYG00000031683 ENSOMYG00000031785 ENSOMYG00000031847 ENSOMYG00000031943 ENSOMYG00000031982 ENSOMYG00000032031 ENSOMYG00000032074 ENSOMYG00000032093 ENSOMYG00000032300 #22 ENSOMYG00000015966 ENSOMYG00000016156 ENSOMYG00000049322 ENSOMYG00000075427 ENSOMYG00000054440 ENSOMYG00000057949 ENSOMYG00000016163 ENSOMYG00000016165 ENSOMYG00000016168 ENSOMYG00000016209 ENSOMYG00000016525 ENSOMYG00000016590 ENSOMYG00000016730 abcc4 (ENSOMYG00000020308) cldn10a (ENSOMYG00000020750) Oncorhynchus_a ANCESTRAL SPECIES 86 ENSGT00950000183071.a.a.b.c.a.b.a ENSGT00390000004600.b.a.h ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.b ENSGT00940000163513.d ENSGT00390000000673.a.b.c ENSGT00940000155099.k.b.e.a ENSGT00950000183009.db.a.b.a ENSGT00940000155489.a.c.a ENSGT00390000011514 ENSGT00940000157267.a ENSGT00510000047718.c ENSGT00950000182895.a.b.v.j.a.a ENSGT00940000164909.e.b.i ENSGT00390000014839.b.f.b ENSGT00440000033329.b.a.a.c.a ENSGT00940000155063.a.b.f #22 ENSGT00940000155107.b.a.e ENSGT01090000260082.d.a.b.q.a.a ENSGT00940000163999.a.c.a.b.a.b.f ENSGT00940000163999.a.c.a.b.a.b.e.a ENSGT00940000163999.a.c.a.b.a.a.b ENSGT00390000009178.h ENSGT00940000164480.a.a.g.a.a.b ENSGT00390000012496.a.c.b.b.a ENSGT00390000019377.b.e.d.a.b Chinook salmon MODERN SPECIES 5 uggt1 (ENSOTSG00005022205) ENSOTSG00005022580 ENSOTSG00005022583 ENSOTSG00005022588 ENSOTSG00005022591 ENSOTSG00005022594 ENSOTSG00005022645 TRA2B (ENSOTSG00005022648) ENSOTSG00005022649 ENSOTSG00005022650 ENSOTSG00005022651 rassf6 (ENSOTSG00005022652) ENSOTSG00005022654 ENSOTSG00005022655 ENSOTSG00005022691 ENSOTSG00005022693 #22 ENSOTSG00005023916 ENSOTSG00005023952 tlr22 (ENSOTSG00005026606) ENSOTSG00005026607 ENSOTSG00005026608 ENSOTSG00005026609 VANGL1 (ENSOTSG00005026610) ENSOTSG00005026612 poglut1 (ENSOTSG00005026614) timmdc1 (ENSOTSG00005026791) abcc4 (ENSOTSG00005026793) abcc4 (ENSOTSG00005027263) ENSOTSG00005035925 ENSOTSG00005035928 dzip1 (ENSOTSG00005035933) Coho salmon MODERN SPECIES 7 ENSOKIG00005017619 ENSOKIG00005017601 ENSOKIG00005017591 ENSOKIG00005017581 ENSOKIG00005017465 ENSOKIG00005017445 TRA2B (ENSOKIG00005017348) ENSOKIG00005017302 zgc:112416 (ENSOKIG00005017214) ENSOKIG00005017173 TSPEAR (ENSOKIG00005017150) SUMO3 (ENSOKIG00005017139) ENSOKIG00005017083 ATG9A (ENSOKIG00005016974) ENSOKIG00005016937 ENSOKIG00005016200 #22 ENSOKIG00005016124 ENSOKIG00005016118 ENSOKIG00005013915 ENSOKIG00005013499 ENSOKIG00005013465 ENSOKIG00005013460 ENSOKIG00005013454 ENSOKIG00005013447 tlr22 (ENSOKIG00005013441) ENSOKIG00005013258 ENSOKIG00005013239 ENSOKIG00005013223 ENSOKIG00005012776 poglut1 (ENSOKIG00005012497) timmdc1 (ENSOKIG00005012469) Northern pike MODERN SPECIES 21 SYAP1 (ENSELUG00000010637) phospho2 (ENSELUG00000010608) ENSELUG00000010566 ola1 (ENSELUG00000010548) ENSELUG00000010520 TRA2B (ENSELUG00000010477) ENSELUG00000030506 ENSELUG00000010433 ENSELUG00000009974 ENSELUG00000009935 TSPEAR (ENSELUG00000009812) ENSELUG00000001518 ENSELUG00000009709 atg9a (ENSELUG00000009602) ENSELUG00000009573 MAP4K4 (ENSELUG00000009520) #22 ENSELUG00000009319 ENSELUG00000009290 tlr22 (ENSELUG00000009256) ENSELUG00000009243 ENSELUG00000009208 VANGL1 (ENSELUG00000009195) ENSELUG00000009144 poglut1 (ENSELUG00000009087) ENSELUG00000009037 ENSELUG00000009064 SSBP4 (ENSELUG00000008998) keap1a (ENSELUG00000008917) crlf1a (ENSELUG00000008880) odf3l2a (ENSELUG00000008837) ebi3 (ENSELUG00000008819) Euteleosteomorpha ANCESTRAL SPECIES 6 ENSGT00940000157232 ENSGT00940000165617 ENSGT00550000074800.a.a.a ENSGT00940000163195.B.b ENSGT00390000002753 ENSGT00940000158859.e ENSGT01030000234607.B ENSGT00940000157954 ENSGT00940000165303 ENSGT00940000155863 ENSGT00390000007741.b ENSGT00940000159106 ENSGT00830000128380 ENSGT00390000000227 ENSGT00950000183075.a.b ENSGT00940000155063.b #22 ENSGT00940000159309 ENSGT00940000160673 ENSGT00940000178351 ENSGT00940000155526.i.a ENSGT00390000008686.d.b ENSGT00950000182984.b.a.b.e ENSGT00940000159683 ENSGT00390000012728 ENSGT00950000183197.b.b ENSGT00940000155442.p ENSGT00940000155963.f ENSGT00390000007069 ENSGT00940000160029 ENSGT00940000160127 ENSGT00940000155353.a.a.a Protacanthopterygii ANCESTRAL SPECIES 18 ENSGT00940000157232 ENSGT00940000165617 ENSGT00940000163195.B.b ENSGT00390000002753.g ENSGT00940000158859.e ENSGT01030000234607.B ENSGT00940000157954 ENSGT00940000165303 ENSGT00940000155863 ENSGT00390000007662.d.b ENSGT00390000007741.b ENSGT00940000159106.b ENSGT00830000128380 ENSGT00390000000227 ENSGT00950000183075.a.b ENSGT00940000155063.b #22 ENSGT00940000159309 ENSGT00940000160673 ENSGT00940000155526.i.a ENSGT00390000008686.d.b ENSGT00950000182984.b.a.b.e ENSGT00940000159683 ENSGT00390000012728 ENSGT00950000183197.b.b ENSGT00940000155442.p ENSGT00390000007069 ENSGT00940000160029 ENSGT00940000160127.j ENSGT00940000155353.a.a.a ENSGT01030000234646.B.a.a.b ENSGT00940000164127.a Salmoninae ANCESTRAL SPECIES 6 ENSGT00390000002220 ENSGT00940000166545 ENSGT00940000158665.c.l ENSGT00940000164857 ENSGT00940000157232.s ENSGT00940000165617 ENSGT00940000163195.B.b.c ENSGT00390000002753.g ENSGT00940000158859.e.g ENSGT01030000234607.B ENSGT00940000157954.l ENSGT00940000155863.c.b ENSGT00830000128380.jb ENSGT00390000000227 ENSGT00950000183075.a.b.t ENSGT00940000155063.b #22 ENSGT00940000159309.d.a ENSGT00940000160673.e ENSGT00940000155526.i.a.f ENSGT00390000008686.d.b.c ENSGT00950000182984.b.a.b.e.b ENSGT00940000159683 ENSGT00950000183197.b.b.e ENSGT00940000155442.p.d ENSGT00940000155963.e.g.a ENSGT00390000007069.c ENSGT00940000160029.c ENSGT00940000160127.j.b ENSGT00940000155353.a.a.a.h ENSGT01030000234646.B.a.a.b.d ENSGT00940000164127.a.g Salmoninae_a ANCESTRAL SPECIES ENSGT00940000166545 ENSGT00940000158665.c.l ENSGT00940000164857 ENSGT00940000157232.s ENSGT00940000165617 ENSGT00940000163195.B.b.c ENSGT00390000002753.g ENSGT00940000158859.e.g ENSGT01030000234607.B ENSGT00940000157954.l ENSGT00940000155863.c.b ENSGT00940000159106.b.d.a ENSGT00830000128380.jb ENSGT00390000000227 ENSGT00950000183075.a.b.t ENSGT00940000155063.b #22 ENSGT00940000159309.d.b ENSGT00940000160673.e ENSGT00940000155526.i.a.f ENSGT00390000008686.d.b.c ENSGT00950000182984.b.a.b.e.b ENSGT00940000159683 ENSGT00950000183197.b.b.e ENSGT00940000155442.p.d ENSGT00940000155963.e.g.a ENSGT00390000007069.c ENSGT00940000160029.c ENSGT00940000160127.j.b ENSGT00940000155353.a.a.a.h ENSGT01030000234646.B.a.a.b.d ENSGT00940000164127.a.g Oncorhynchus ANCESTRAL SPECIES 13 ENSGT00940000166545 ENSGT00940000158665.c.l ENSGT00940000164857 ENSGT00940000157232.s ENSGT00940000165617 ENSGT00940000163195.B.b.c ENSGT00390000002753.g ENSGT00940000158859.e.g ENSGT01030000234607.B ENSGT00940000157954.l ENSGT00940000155863.c.b ENSGT00940000159106.b.d.a ENSGT00830000128380.jb ENSGT00390000000227 ENSGT00950000183075.a.b.t ENSGT00940000155063.b #22 ENSGT00940000160673.e ENSGT00940000155526.i.a.f ENSGT00390000008686.d.b.c ENSGT00950000182984.b.a.b.e.b ENSGT00940000159683 ENSGT00950000183197.b.b.e ENSGT00940000155442.p.d ENSGT00940000155963.e.g.a ENSGT00390000007069.c ENSGT00940000160029.c ENSGT00940000160127.j.b ENSGT00940000155353.a.a.a.h ENSGT01030000234646.B.a.a.b.d ENSGT00940000164127.a.g ENSGT00940000156075.a.a.g Oncorhynchus_a ANCESTRAL SPECIES 11 ENSGT00940000166545 ENSGT00940000158665.c.l ENSGT00940000164857 ENSGT00940000157232.s ENSGT00940000165617 ENSGT00940000163195.B.b.c ENSGT00390000002753.g ENSGT00940000158859.e.g ENSGT01030000234607.B ENSGT00940000157954.l ENSGT00940000155863.c.b ENSGT00940000159106.b.d.a ENSGT00830000128380.jb ENSGT00390000000227 ENSGT00950000183075.a.b.t ENSGT00940000155063.b #22 ENSGT00940000160673.e ENSGT00940000155526.i.a.f ENSGT00390000008686.d.b.c ENSGT00950000182984.b.a.b.e.b ENSGT00940000159683 ENSGT00950000183197.b.b.e ENSGT00940000155442.p.d ENSGT00940000155963.e.g.a ENSGT00390000007069.c ENSGT00940000160029.c ENSGT00940000160127.j.b ENSGT00940000155353.a.a.a.h ENSGT01030000234646.B.a.a.b.d ENSGT00940000164127.a.g ENSGT00940000156075.a.a.g Coho salmon MODERN SPECIES 18 ENSOKIG00005037041 dhrs9 (ENSOKIG00005042873) rdh1 (ENSOKIG00005042904) lrp2a (ENSOKIG00005043132) zgc:172182 (ENSOKIG00005044791) col28a2a (ENSOKIG00005044808) bbs5 (ENSOKIG00005044863) klhl41a (ENSOKIG00005044911) fastkd1 (ENSOKIG00005045029) PPIG (ENSOKIG00005045117) phgdh (ENSOKIG00005045344) KLHL23 (ENSOKIG00005045748) SSB (ENSOKIG00005045756) mettl5 (ENSOKIG00005045850) ubr3 (ENSOKIG00005045918) ENSOKIG00005046342 #22 ENSOKIG00005046355 sp5a (ENSOKIG00005046365) GAD1 (ENSOKIG00005046478) GORASP2 (ENSOKIG00005048023) TLK1 (ENSOKIG00005048065) mettl8 (ENSOKIG00005048200) cybrd1 (ENSOKIG00005048211) ENSOKIG00005048214 DYNC1I2 (ENSOKIG00005048288) SLC25A12 (ENSOKIG00005048635) hat1 (ENSOKIG00005048791) dlx1a (ENSOKIG00005048797) DLX2 (ENSOKIG00005048804) ITGA6 (ENSOKIG00005048913) ENSOKIG00005049161 Chinook salmon MODERN SPECIES 18 ENSOTSG00005043719 dhrs9 (ENSOTSG00005047659) rdh1 (ENSOTSG00005047660) lrp2a (ENSOTSG00005047662) zgc:172182 (ENSOTSG00005047700) col28a2a (ENSOTSG00005047701) bbs5 (ENSOTSG00005047703) klhl41a (ENSOTSG00005047704) fastkd1 (ENSOTSG00005047705) PPIG (ENSOTSG00005047706) phgdh (ENSOTSG00005047707) KLHL23 (ENSOTSG00005047708) ssb (ENSOTSG00005047709) mettl5 (ENSOTSG00005047710) ubr3 (ENSOTSG00005047714) ENSOTSG00005047737 #22 sp5a (ENSOTSG00005047739) GAD1 (ENSOTSG00005047745) GORASP2 (ENSOTSG00005047765) TLK1 (ENSOTSG00005047766) mettl8 (ENSOTSG00005047767) cybrd1 (ENSOTSG00005047768) DYNC1I2 (ENSOTSG00005047769) SLC25A12 (ENSOTSG00005047797) ENSOTSG00005047807 hat1 (ENSOTSG00005047808) dlx1a (ENSOTSG00005047809) DLX2 (ENSOTSG00005047810) ITGA6 (ENSOTSG00005047812) PDK1 (ENSOTSG00005047817) ENSOTSG00005047818 Rainbow trout MODERN SPECIES 14 ENSOMYG00000048252 dhrs9 (ENSOMYG00000027774) rdh1 (ENSOMYG00000027766) lrp2a (ENSOMYG00000027259) zgc:172182 (ENSOMYG00000026895) col28a2a (ENSOMYG00000026869) bbs5 (ENSOMYG00000026737) klhl41a (ENSOMYG00000026640) fastkd1 (ENSOMYG00000026590) PPIG (ENSOMYG00000026522) phgdh (ENSOMYG00000026453) KLHL23 (ENSOMYG00000026440) SSB (ENSOMYG00000026055) mettl5 (ENSOMYG00000025924) ubr3 (ENSOMYG00000024807) ENSOMYG00000064928 #22 ENSOMYG00000061434 sp5a (ENSOMYG00000024143) ENSOMYG00000071213 GAD1 (ENSOMYG00000023636) GORASP2 (ENSOMYG00000023381) TLK1 (ENSOMYG00000021652) mettl8 (ENSOMYG00000021306) cybrd1 (ENSOMYG00000021286) DYNC1I2 (ENSOMYG00000020851) SLC25A12 (ENSOMYG00000017962) ENSOMYG00000017687 ENSOMYG00000069260 DLX1 (ENSOMYG00000017667) DLX2 (ENSOMYG00000017658) ITGA6 (ENSOMYG00000011949) Salmo ANCESTRAL SPECIES 10 ENSGT00940000166545 ENSGT00940000158665.c.l ENSGT00940000164857 ENSGT00940000157232.s ENSGT00940000165617 ENSGT00940000163195.B.b.c ENSGT00390000002753.g ENSGT00940000158859.e.g ENSGT01030000234607.B ENSGT00940000157954.l ENSGT00940000155863.c.b ENSGT00940000159106.b.d.a ENSGT00830000128380.jb ENSGT00390000000227 ENSGT00950000183075.a.b.t ENSGT00940000155063.b #22 ENSGT00940000159309.d.b ENSGT00940000160673.e ENSGT00940000155526.i.a.f ENSGT00390000008686.d.b.c ENSGT00950000182984.b.a.b.e.b ENSGT00940000159683.c ENSGT00950000183197.b.b.e ENSGT00940000155442.p.d ENSGT00940000155963.e.g.a ENSGT00390000007069.c ENSGT00940000160029.c ENSGT00940000160127.j.b ENSGT00940000155353.a.a.a.h ENSGT01030000234646.B.a.a.b.d ENSGT00940000164127.a.g River trout MODERN SPECIES 12 ENSSTUG00000006302 dhrs9 (ENSSTUG00000006212) rdh1 (ENSSTUG00000006203) lrp2a (ENSSTUG00000005733) zgc:172182 (ENSSTUG00000005706) col28a2a (ENSSTUG00000005698) bbs5 (ENSSTUG00000005627) klhl41a (ENSSTUG00000005587) ppig (ENSSTUG00000005558) fastkd1 (ENSSTUG00000005340) phgdh (ENSSTUG00000005177) KLHL23 (ENSSTUG00000005157) ssb (ENSSTUG00000004965) mettl5 (ENSSTUG00000004792) ubr3 (ENSSTUG00000002468) ENSSTUG00000002179 #22 sp5a (ENSSTUG00000021594) GAD1 (ENSSTUG00000019499) GORASP2 (ENSSTUG00000019346) TLK1 (ENSSTUG00000015931) mettl8 (ENSSTUG00000015781) cybrd1 (ENSSTUG00000015765) DYNC1I2 (ENSSTUG00000014633) SLC25A12 (ENSSTUG00000014467) hat1 (ENSSTUG00000014377) dlx1a (ENSSTUG00000014357) DLX2 (ENSSTUG00000014349) ITGA6 (ENSSTUG00000013418) PDK1 (ENSSTUG00000013250) ENSSTUG00000013136 RAPGEF4 (ENSSTUG00000012579) Atlantic salmon MODERN SPECIES 13 ENSSSAG00000047308 dhrs9 (ENSSSAG00000052422) rdh1 (ENSSSAG00000052431) lrp2a (ENSSSAG00000052675) zgc:172182 (ENSSSAG00000054705) col28a2a (ENSSSAG00000054723) bbs5 (ENSSSAG00000054778) ENSSSAG00000118995 fastkd1 (ENSSSAG00000054941) ppig (ENSSSAG00000055010) phgdh (ENSSSAG00000100673) ENSSSAG00000082598 lab (ENSSSAG00000055145) METTL5 (ENSSSAG00000055322) ubr3 (ENSSSAG00000055401) ENSSSAG00000056966 #22 ENSSSAG00000114497 ENSSSAG00000099806 sp5a (ENSSSAG00000056981) GAD1 (ENSSSAG00000057067) GORASP2 (ENSSSAG00000062894) tlk1 (ENSSSAG00000063010) mettl8 (ENSSSAG00000068030) DYNC1I2 (ENSSSAG00000068084) SLC25A12 (ENSSSAG00000069448) hat1 (ENSSSAG00000069538) DLX1 (ENSSSAG00000101402) DLX2 (ENSSSAG00000110538) ITGA6 (ENSSSAG00000069787) ENSSSAG00000096355 PDK1 (ENSSSAG00000070045) Acanthomorphata ANCESTRAL SPECIES 5 ENSGT00940000163195.B.b ENSGT01090000260278 ENSGT00390000002753 ENSGT00940000158859.e ENSGT01030000234607.B ENSGT00940000157954 ENSGT00940000165303 ENSGT00940000155863 ENSGT00390000007662.d.b ENSGT00390000007741.b ENSGT00940000159106 ENSGT00830000128380 ENSGT00390000000227 ENSGT00950000183075.a.b ENSGT00940000159309 ENSGT00940000155063.b #22 ENSGT00940000160673 ENSGT00940000178351 ENSGT00940000155526.i.a ENSGT00390000008686.d.b ENSGT00950000182984.b.a.b.e ENSGT00940000159683 ENSGT00390000012728 ENSGT00950000183197.b.b ENSGT00940000155442.p ENSGT00940000155963.f ENSGT00390000007069 ENSGT00940000160029 ENSGT00940000160127 ENSGT00940000155353.a.a.a ENSGT00940000161737 Cod MODERN SPECIES 12 rdh1 (ENSGMOG00000027878) lrp2a (ENSGMOG00000003139) zgc:172182 (ENSGMOG00000003120) ENSGMOG00000003008 ENSGMOG00000002940 bbs5 (ENSGMOG00000002910) klhl41a (ENSGMOG00000002892) fastkd1 (ENSGMOG00000002850) PPIG (ENSGMOG00000002765) ENSGMOG00000002751 phgdh (ENSGMOG00000002719) KLHL23 (ENSGMOG00000023721) SSB (ENSGMOG00000002664) mettl5 (ENSGMOG00000002643) ubr3 (ENSGMOG00000002578) ENSGMOG00000029614 #22 sp5a (ENSGMOG00000002497) GAD1 (ENSGMOG00000002464) GORASP2 (ENSGMOG00000002439) TLK1 (ENSGMOG00000002397) mettl8 (ENSGMOG00000002374) dcaf17 (ENSGMOG00000002358) cybrd1 (ENSGMOG00000008161) ENSGMOG00000023386 ENSGMOG00000029758 hat1 (ENSGMOG00000002262) dlx1a (ENSGMOG00000002250) DLX2 (ENSGMOG00000037166) ITGA6 (ENSGMOG00000002164) ENSGMOG00000031661 PDK1 (ENSGMOG00000002103) Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000155063.b #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000155063.b #22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000155063.b #22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000155063.b #22 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00940000155063.b #22 Carangaria ANCESTRAL SPECIES ENSGT00940000155063.b #22 Carangaria_A ANCESTRAL SPECIES ENSGT00940000155063.b #22 Seriola ANCESTRAL SPECIES ENSGT00940000155063.b #22 Yellowtail amberjack MODERN SPECIES 2270 ENSSLDG00000005065 #22 ENSSLDG00000005022 ##23 ENSSLDG00000004964 ##23 ENSSLDG00000004928 ##23 ENSSLDG00000004902 #26 ENSSLDG00000004886 RDX (ENSSLDG00000004822) ENSSLDG00000004785 Eupercaria ANCESTRAL SPECIES ENSGT00940000155063.b #22 Eupecaria_A ANCESTRAL SPECIES ENSGT00940000155063.b #22 Eupecaria_B ANCESTRAL SPECIES ENSGT00940000155063.b #22 Perciformes ANCESTRAL SPECIES 198 ENSGT00390000013183.c ENSGT00940000155063.b #22 Perciformes_a ANCESTRAL SPECIES 292 ENSGT00390000013183.c ENSGT00940000155063.b #22 Channel bull blenny MODERN SPECIES 12 TNK2 (ENSCGOG00000017071) ENSCGOG00000017026 and1 (ENSCGOG00000017018) cops9 (ENSCGOG00000017016) otos (ENSCGOG00000017014) apodb (ENSCGOG00000017005) apodb (ENSCGOG00000017001) ARHGAP21 (ENSCGOG00000016457) ENSCGOG00000016380 enkur (ENSCGOG00000016376) THNSL1 (ENSCGOG00000016372) ENSCGOG00000016370 GPR158 (ENSCGOG00000016366) anxa13 (ENSCGOG00000016333) ENSCGOG00000016329 ENSCGOG00000016323 #22 gad2 (ENSCGOG00000015811) apbb1ip (ENSCGOG00000015785) ENSCGOG00000015769 pdss1 (ENSCGOG00000015738) abi1a (ENSCGOG00000015290) acbd5a (ENSCGOG00000015251) mastl (ENSCGOG00000015245) YME1L1 (ENSCGOG00000014425) ENSCGOG00000014360 fasn2 (ENSCGOG00000014353) fasn2 (ENSCGOG00000014346) rdh12l (ENSCGOG00000014344) ca2 (ENSCGOG00000014240) rad51b (ENSCGOG00000014235) ENSCGOG00000014232 Ovalentaria ANCESTRAL SPECIES ENSGT00940000155063.b #22 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000155063.b #22 Oryzias ANCESTRAL SPECIES ENSGT00940000155063.b #22 Oryzias_a ANCESTRAL SPECIES ENSGT00940000155063.b #22 Chinese medaka MODERN SPECIES 5244 anxa13 (ENSOSIG00000004331) ENSOSIG00000004334 #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000155063.b #22 Pomacentridae ANCESTRAL SPECIES ENSGT00940000155063.b #22 Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000155063.b #22 Spiny chromis MODERN SPECIES 1695 ENSAPOG00000003249 bbs5 (ENSAPOG00000003305) klhl41a (ENSAPOG00000003344) fastkd1 (ENSAPOG00000003378) PPIG (ENSAPOG00000003397) ENSAPOG00000003410 phgdh (ENSAPOG00000003423) KLHL23 (ENSAPOG00000003436) ssb (ENSAPOG00000003448) mettl5 (ENSAPOG00000003478) ubr3 (ENSAPOG00000003581) ENSAPOG00000003605 #22 Otomorpha DUPLICATION Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES 216 ENSGT00940000159528 ENSGT01040000240539.b ENSGT00390000011864 ENSGT01050000244937.a.a.r ENSGT00390000012063 ENSGT00950000183115.b.a.m.a ENSGT00940000160136.p ENSGT00960000191502 ENSGT00940000173214 ENSGT00950000183097.a.a.b ENSGT00390000006356 #18 ENSGT00950000183030 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000175639 ENSGT00940000155063.c.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b.e ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00510000051617 ENSGT00940000158406 ENSGT00940000158231.k ENSGT00940000157314.B ENSGT00510000048978 ENSGT00940000158231.l ENSGT00390000016499 Clupeiformes DUPLICATION Clupeiformes ANCESTRAL SPECIES 123 ENSGT00940000159160 ENSGT00550000075118 ENSGT00390000009001 ENSGT00940000156552.c.b ENSGT00940000153676.b ENSGT00390000004360.a.b.a.a.b ENSGT00940000157874.q.a ENSGT00940000157872 ENSGT00940000157849.n ENSGT00940000155360.B.k ENSGT00940000163243 ENSGT00390000008846 ENSGT00950000183030 ENSGT00940000157128 ENSGT00440000033329.b.a.a ENSGT00940000155063.c.a.a #22 Denticle herring MODERN SPECIES 6 rbbp9 (ENSDCDG00000016917) zmynd10 (ENSDCDG00000016923) gspt1l (ENSDCDG00000016935) cdadc1 (ENSDCDG00000016937) cab39l (ENSDCDG00000016942) MCF2L (ENSDCDG00000017005) tubgcp3 (ENSDCDG00000020521) ATP11A (ENSDCDG00000020652) arhgef7b (ENSDCDG00000025684) ENSDCDG00000028317 lipt1 (ENSDCDG00000028402) ITLN1 (ENSDCDG00000028405) rpl31 (ENSDCDG00000028408) chst10 (ENSDCDG00000028413) LONRF2 (ENSDCDG00000028414) ENSDCDG00000028443 #22 ugt1b1 (ENSDCDG00000028733) ugt1b2 (ENSDCDG00000028735) ENSDCDG00000028742 ENSDCDG00000028747 ENSDCDG00000028750 ENSDCDG00000028754 ENSDCDG00000028756 ENSDCDG00000028757 ENSDCDG00000028759 ENSDCDG00000028762 ENSDCDG00000028768 ENSDCDG00000028770 ENSDCDG00000028771 ENSDCDG00000028774 ENSDCDG00000028776 Atlantic herring MODERN SPECIES 13 alg11 (ENSCHAG00000015425) spp2 (ENSCHAG00000015538) raph1b (ENSCHAG00000015556) cab39l (ENSCHAG00000015647) MCF2L (ENSCHAG00000015785) ENSCHAG00000016052 tubgcp3 (ENSCHAG00000016064) ATP11A (ENSCHAG00000016236) sox1b (ENSCHAG00000018680) arhgef7b (ENSCHAG00000018756) ENSCHAG00000020937 lipt1 (ENSCHAG00000021873) rpl31 (ENSCHAG00000021878) chst10 (ENSCHAG00000021911) ENSCHAG00000021914 MAP4K4 (ENSCHAG00000021943) #22 ugt1b5 (ENSCHAG00000023384) ENSCHAG00000023392 atp5pf (ENSCHAG00000023416) jam2a (ENSCHAG00000023428) mrpl39 (ENSCHAG00000023440) ENSCHAG00000023503 ENSCHAG00000023522 ENSCHAG00000023527 bcor (ENSCHAG00000023536) mid1ip1b (ENSCHAG00000023555) tspan7b (ENSCHAG00000023556) ENSCHAG00000023573 xk (ENSCHAG00000002432) GRPR (ENSCHAG00000002488) noxo1b (ENSCHAG00000002840) Clupeiformes ANCESTRAL SPECIES 319 ENSGT00390000006356 #18 ENSGT00960000186941 ENSGT00940000158977 ENSGT00940000167197 ENSGT00940000154295 ENSGT00940000175639 ENSGT00940000155063.c.a.b #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b.e ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00970000198121 ENSGT00940000158406 ENSGT00940000158231.k ENSGT00940000178189 ENSGT00940000158231.l ENSGT00980000202316 Atlantic herring MODERN SPECIES 11 ENSCHAG00000007933 ENSCHAG00000007914 ENSCHAG00000007882 ENSCHAG00000007814 #26 ENSCHAG00000007796 ENSCHAG00000007776 GOLT1B (ENSCHAG00000007742) ENSCHAG00000007735 ENSCHAG00000007728 ENSCHAG00000007716 cnot11 (ENSCHAG00000007676) #18 ENSCHAG00000007656 TBC1D8 (ENSCHAG00000007575) ENSCHAG00000007535 PDCL3 (ENSCHAG00000007508) ENSCHAG00000004621 #22 ENSCHAG00000003969 ENSCHAG00000003871 ##23 ENSCHAG00000003840 ENSCHAG00000003813 ENSCHAG00000003744 ##23 ENSCHAG00000002146 ENSCHAG00000002107 wdr4 (ENSCHAG00000002048) ENSCHAG00000001997 ENSCHAG00000001973 ENSCHAG00000001936 ENSCHAG00000001922 pdxka (ENSCHAG00000001811) ENSCHAG00000001723 ENSCHAG00000001706 Denticle herring MODERN SPECIES 2 ENSDCDG00000004821 psmb4 (ENSDCDG00000004826) ENSDCDG00000004835 gatad1 (ENSDCDG00000004843) lrrc14b (ENSDCDG00000004849) uqcrb (ENSDCDG00000004855) mterf3 (ENSDCDG00000004862) PTDSS1 (ENSDCDG00000004892) nup153 (ENSDCDG00000005142) rbm24a (ENSDCDG00000005153) cap2 (ENSDCDG00000005174) cnot11 (ENSDCDG00000005383) #18 ENSDCDG00000005388 PDCL3 (ENSDCDG00000005396) ENSDCDG00000005400 ENSDCDG00000005455 #22 ENSDCDG00000011029 ##23 ENSDCDG00000011058 ##23 ENSDCDG00000011090 ##23 ENSDCDG00000011121 #26 ENSDCDG00000011137 ENSDCDG00000011150 ENSDCDG00000011163 ENSDCDG00000011170 ENSDCDG00000011340 ENSDCDG00000012799 ENSDCDG00000012806 tpm3 (ENSDCDG00000012884) arhgef1a (ENSDCDG00000013560) ENSDCDG00000013663 ggt1a (ENSDCDG00000013683) Otophysi ANCESTRAL SPECIES 341 ENSGT00940000155063.c.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b.e ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00510000051617 ENSGT00940000158406 ENSGT00940000158231.k ENSGT00940000157314.B ENSGT00510000048978 ENSGT00940000158231.l ENSGT00390000016499 Cyprinoidei ANCESTRAL SPECIES 235 ENSGT01030000234859 ENSGT00690000101915.i.a ENSGT00950000183078.a ENSGT00940000154389.a.r.a.a ENSGT00940000158406 ENSGT00390000011295.a.l.b ENSGT00940000155063.c.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 770 ENSGT00950000183092.a.d.b ENSGT00940000159439.a.c ENSGT00940000156963.a.a ENSGT01030000234859.c ENSGT00690000101915.i.a ENSGT00950000183078.a ENSGT00940000154389.a.r.a.a ENSGT00940000158406.y ENSGT00940000155063.c.a.c #22 ENSGT01090000259985.b.b.b.a.a.a ##23 Goldfish MODERN SPECIES 27 ENSCARG00000064726 stac3 (ENSCARG00000064704) kif5aa (ENSCARG00000061667) map3k12 (ENSCARG00000060481) ENSCARG00000060430 SLC5A7 (ENSCARG00000060301) ENSCARG00000060068 ENSCARG00000060039 il10rb (ENSCARG00000059996) ENSCARG00000048942 #22 ENSCARG00000048362 ##23 ENSCARG00000048344 ENSCARG00000048332 ENSCARG00000048318 ihha (ENSCARG00000048285) mitd1 (ENSCARG00000048258) ENSCARG00000048229 creg2 (ENSCARG00000048190) #20 MGAT4A (ENSCARG00000047479) coa5 (ENSCARG00000047421) si:dkey-4e7.3 (ENSCARG00000047390) inpp4aa (ENSCARG00000045636) ENSCARG00000045515 MFSD9 (ENSCARG00000045502) #31 tmem182a (ENSCARG00000045483) #32 Cyprininae_a ANCESTRAL SPECIES 643 ENSGT00940000156963.a.a ENSGT01030000234859.c ENSGT00690000101915.i.a ENSGT00950000183078.a ENSGT00940000154389.a.r.a.a ENSGT00940000158406.y ENSGT00940000155063.c.a.c #22 ENSGT01090000259985.b.b.b.a.a.a ##23 Common carp reference MODERN SPECIES 41 ENSCCRG00000058595 ENSCCRG00000018729 ENSCCRG00000046669 ENSCCRG00000067204 ENSCCRG00000027701 ENSCCRG00000022944 ENSCCRG00000057367 ENSCCRG00000032536 ENSCCRG00000061282 ENSCCRG00000061497 ENSCCRG00000026533 ENSCCRG00000030939 ENSCCRG00000035630 ENSCCRG00000052914 ENSCCRG00000030886 ENSCCRG00000039479 #22 ENSCCRG00000006462 ##23 ENSCCRG00000060471 Golden-line barbel MODERN SPECIES 676 ENSSGRG00000019538 ENSSGRG00000019537 ENSSGRG00000019536 SLC5A7 (ENSSGRG00000019535) ENSSGRG00000019143 ENSSGRG00000019091 il10rb (ENSSGRG00000019085) ENSSGRG00000007943 #22 ENSSGRG00000007665 ##23 ENSSGRG00000007440 ENSSGRG00000007426 ENSSGRG00000007423 Cyprininae ANCESTRAL SPECIES 530 ENSGT00940000155773.b.bb ENSGT00940000161094.i.a ENSGT01080000258228 ENSGT00940000159439.a.d ENSGT00940000154129.hd ENSGT00940000159006.c.b ENSGT00390000009446 ENSGT00530000063509.B ENSGT00940000155232.t.a.b.a ENSGT00940000166809 ENSGT00940000155232.t.b.b ENSGT00390000011821 ENSGT01080000257462.a.b.a.b.b.a ENSGT00940000158406.z.a ENSGT00390000011295.a.l.b ENSGT00940000155063.c.a.d #22 ENSGT00940000174098 Cyprininae_a ANCESTRAL SPECIES 432 ENSGT00940000155773.b.bb ENSGT00940000161094.i.a ENSGT01080000258228 ENSGT00940000159439.a.d ENSGT00940000154129.hd.f ENSGT00940000159006.c.b ENSGT00390000009446 ENSGT00530000063509.B ENSGT00940000155232.t.a.b.a ENSGT00940000166809 ENSGT00940000155232.t.b.b ENSGT00390000011821 ENSGT01080000257462.a.b.a.b.b.a ENSGT00940000158406.z.a ENSGT00390000011295.a.l.b ENSGT00940000155063.c.a.d #22 ENSGT00940000174098 ENSGT01090000260030.a.b.a.b.b.a.b.a.a.a.a.a.a.a.a.a.b.b.a.b.a.a.a Common carp reference MODERN SPECIES 46 aaas (ENSCCRG00000017006) plbd2 (ENSCCRG00000001615) ENSCCRG00000002354 ENSCCRG00000070832 ENSCCRG00000002365 ENSCCRG00000002370 lims2 (ENSCCRG00000002391) ENSCCRG00000069729 ENSCCRG00000069076 ENSCCRG00000081244 il10rb (ENSCCRG00000064517) ENSCCRG00000081802 ENSCCRG00000081593 il10rb (ENSCCRG00000052839) hycc2 (ENSCCRG00000034675) ENSCCRG00000034783 #22 ENSCCRG00000035781 ##23 ENSCCRG00000020302 ENSCCRG00000004223 ENSCCRG00000080594 ENSCCRG00000041836 ENSCCRG00000082350 ENSCCRG00000067736 ENSCCRG00000062566 ENSCCRG00000052930 ENSCCRG00000072119 ENSCCRG00000066098 ENSCCRG00000058148 ENSCCRG00000061468 ENSCCRG00000020500 ENSCCRG00000065076 Golden-line barbel MODERN SPECIES 1026 ENSSGRG00000024703 #22 ENSSGRG00000024536 ENSSGRG00000024534 ENSSGRG00000024516 ENSSGRG00000024515 ENSSGRG00000024513 ENSSGRG00000024511 ENSSGRG00000024509 ENSSGRG00000024508 Goldfish MODERN SPECIES 49 ENSCARG00000002440 cldn10b (ENSCARG00000002433) ENSCARG00000002430 ENSCARG00000002386 ENSCARG00000002365 ENSCARG00000002361 ENSCARG00000002356 lims2 (ENSCARG00000002009) RANBP2 (ENSCARG00000001830) ENSCARG00000001784 ENSCARG00000001777 il10rb (ENSCARG00000001744) ENSCARG00000001732 ENSCARG00000001729 hycc2 (ENSCARG00000066955) ENSCARG00000064206 #22 sp5a (ENSCARG00000063937) GAD1 (ENSCARG00000060480) tlk1a (ENSCARG00000058411) ITGA6 (ENSCARG00000056600) dlx2a (ENSCARG00000056463) dlx1a (ENSCARG00000056451) hat1 (ENSCARG00000056171) dync1i2a (ENSCARG00000055508) ENSCARG00000055334 RAPGEF4 (ENSCARG00000054818) MAP3K20 (ENSCARG00000054704) cdca7a (ENSCARG00000054678) sp3a (ENSCARG00000054660) sp9 (ENSCARG00000054640) CIR1 (ENSCARG00000054627) Zebrafish MODERN SPECIES 24 map3k12 (ENSDARG00000103651) aaas (ENSDARG00000102274) ENSDARG00000114697 plbd2 (ENSDARG00000114245) ENSDARG00000099598 ENSDARG00000105042 cldn10b (ENSDARG00000104528) ENSDARG00000103337 ENSDARG00000100150 SLC5A7 (ENSDARG00000102336) ENSDARG00000110024 lims2 (ENSDARG00000014976) RANBP2 (ENSDARG00000093125) il10rb (ENSDARG00000078042) hycc2 (ENSDARG00000101696) MAP4K4 (ENSDARG00000098670) #22 ENSDARG00000100461 Characiphysae ANCESTRAL SPECIES 107 ENSGT00940000155131 ENSGT01000000214434.B.a.a.b ENSGT00940000155063.c.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b.e ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00510000051617 ENSGT00940000158406 ENSGT00940000158231.k ENSGT00510000048847 ENSGT00940000158493 ENSGT00390000004145.b ENSGT00390000016484 ENSGT00940000155466.e.b ENSGT00940000154014.b.b ENSGT00390000005550 ENSGT00390000005581.b Characiphysae_b ANCESTRAL SPECIES 98 ENSGT00940000155131 ENSGT01000000214434.B.a.a.b ENSGT00940000155063.c.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.b.e ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00510000051617 ENSGT00940000158406 ENSGT00940000158231.k ENSGT00940000157314.B ENSGT00510000048978.i ENSGT00940000158231.l ENSGT00390000016499 ENSGT00940000158493 ENSGT00390000004145.b ENSGT00390000016484 ENSGT00940000155466.e.b Characoidei ANCESTRAL SPECIES 111 ENSGT00940000155063.c.a #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT00970000197394 ENSGT01090000259985.b.a.a.a #26 ENSGT00510000051617 ENSGT00940000158406 ENSGT00940000158231.k ENSGT00940000157314.B ENSGT00510000048978.i ENSGT00940000158231.l ENSGT00390000016499 ENSGT00940000158493 ENSGT00390000004145.b ENSGT00390000016484 ENSGT00940000155466.e.b Red-bellied piranha MODERN SPECIES 548 ENSPNAG00000024116 #22 ENSPNAG00000003809 ##23 ENSPNAG00000005667 ##23 ENSPNAG00000024177 ##23 ENSPNAG00000024211 ENSPNAG00000024248 Mexicana tetra MODERN SPECIES 94 ENSAMXG00000035238 ENSAMXG00000017125 #22 Electric eel MODERN SPECIES 102 TMEM50B (ENSEEEG00000003602) ENSEEEG00000002000 ENSEEEG00000001771 #22 ENSEEEG00000001739 ##23 ENSEEEG00000001737 ##23 ENSEEEG00000001736 ENSEEEG00000001735 ##23 ENSEEEG00000001734 ENSEEEG00000001733 #26 ENSEEEG00000001731 ENSEEEG00000001730 ENSEEEG00000001729 crfb4 (ENSEEEG00000001728) ENSEEEG00000001726 ENSEEEG00000001724 ENSEEEG00000001723 ENSEEEG00000001720 tyw5 (ENSEEEG00000001710) Channel catfish MODERN SPECIES 25 ppp1r1c (ENSIPUG00000005526) PDE1A (ENSIPUG00000005500) ENSIPUG00000005475 dusp19 (ENSIPUG00000005462) nckap1 (ENSIPUG00000005237) frzb (ENSIPUG00000005189) ENSIPUG00000005172 rpl31 (ENSIPUG00000005147) cnot11 (ENSIPUG00000005134) #18 ENSIPUG00000005115 lcp1 (ENSIPUG00000005013) itm2b (ENSIPUG00000004947) ENSIPUG00000004892 Tmem50b (ENSIPUG00000004855) ENSIPUG00000004808 ENSIPUG00000004742 #22 ENSIPUG00000004713 ##23 Il1rl2 (ENSIPUG00000004684) ##23 ENSIPUG00000004672 ##23 ENSIPUG00000004631 #26 ifngr2 (ENSIPUG00000004590) ENSIPUG00000004574 ENSIPUG00000004550 Il10rb (ENSIPUG00000004532) ENSIPUG00000004517 ENSIPUG00000004478 ENSIPUG00000004454 ENSIPUG00000004449 tyw5 (ENSIPUG00000004423) c6h2orf47 (ENSIPUG00000004416) pgap1 (ENSIPUG00000004293) Otomorpha ANCESTRAL SPECIES 665 ENSGT00940000157128 ENSGT00440000033329.b.a.a ENSGT00940000155063.c.b #22 Otophysi ANCESTRAL SPECIES 505 ENSGT00940000157128 ENSGT00440000033329.b.a.a ENSGT00940000155063.c.b #22 Characiphysae ANCESTRAL SPECIES 64 ENSGT00940000175812 ENSGT00390000006290 ENSGT00940000165888.f ENSGT00940000155219.hb.a ENSGT00480000042679.b.b ENSGT00390000013700 ENSGT00940000157039.b ENSGT01100000263512.a.a.a.b.a.a ENSGT00940000155821.c.b ENSGT00940000153904.a.h ENSGT00950000182965.b ENSGT00950000183035.a.b.b ENSGT00950000182803.B.d.b ENSGT00940000157128 ENSGT00440000033329.b.a.a ENSGT00940000155063.c.b #22 Channel catfish MODERN SPECIES 18 ENSIPUG00000012948 ENSIPUG00000012909 pcdh8 (ENSIPUG00000012901) pcdh8 (ENSIPUG00000012893) LECT1 (ENSIPUG00000012864) sugt1 (ENSIPUG00000012837) ENSIPUG00000012789 ednrba (ENSIPUG00000012775) MID1 (ENSIPUG00000012759) arhgap6 (ENSIPUG00000012678) msl3 (ENSIPUG00000012531) ENSIPUG00000012420 prps2 (ENSIPUG00000012248) chst10 (ENSIPUG00000012220) lonrf2 (ENSIPUG00000012192) MAP4K4 (ENSIPUG00000011853) #22 ccdc81 (ENSIPUG00000011797) PRSS23 (ENSIPUG00000011778) tmem39a-a (ENSIPUG00000011735) ildr1a (ENSIPUG00000011675) ildr2 (ENSIPUG00000011641) ENSIPUG00000011576 ENSIPUG00000011542 ENSIPUG00000011515 ENSIPUG00000011490 dusp27 (ENSIPUG00000011465) pou2f1 (ENSIPUG00000011393) cd247 (ENSIPUG00000011307) creg1 (ENSIPUG00000011270) ##20 ENSIPUG00000011231 ENSIPUG00000011157 Characiphysae_b ANCESTRAL SPECIES 45 ENSGT00940000175812 ENSGT00390000006290 ENSGT00940000165888.f ENSGT00940000155219.hb.a ENSGT00480000042679.b.b ENSGT00390000013700 ENSGT00940000157039.b ENSGT01100000263512.a.a.a.b.a.a ENSGT00940000155821.c.b ENSGT00940000153904.a.h ENSGT00950000182965.b ENSGT00950000183035.a.b.b ENSGT00950000182803.B.d.b ENSGT00940000157128 ENSGT00440000033329.b.a.a ENSGT00940000155063.c.b #22 ENSGT00940000165237.b.b ENSGT00940000178309 ENSGT01100000263563.c.a.b ENSGT00940000155696.ub ENSGT00860000133881 ENSGT00940000161407.b ENSGT00940000161024.d ENSGT00390000006347.b ENSGT00940000155401.v ENSGT00940000155075.a.a.b ENSGT00940000156564.b ENSGT00390000008490 ENSGT00940000156445.p ENSGT00940000160159 ENSGT00510000047027.c.a Characoidei ANCESTRAL SPECIES 42 ENSGT00940000163871.a.d.c ENSGT00390000006290 ENSGT00940000165888.f ENSGT00940000155219.hb.a ENSGT00480000042679.b.b ENSGT00390000013700 ENSGT00940000157039.b ENSGT01100000263512.a.a.a.b.a.a ENSGT00940000155821.c.b ENSGT00940000153904.a.h ENSGT00950000182965.b ENSGT00950000183035.a.b.b ENSGT00950000182803.B.d.b ENSGT00940000157128 ENSGT00440000033329.b.a.a ENSGT00940000155063.c.b #22 ENSGT00940000165237.b.b ENSGT00940000178309 ENSGT01100000263563.c.a.b ENSGT00940000155696.ub ENSGT00860000133881 ENSGT00940000161407.b ENSGT00940000161024.d ENSGT00390000006347.b ENSGT00940000155401.v ENSGT00940000156564.b ENSGT00390000008490 ENSGT00940000156445.p ENSGT00940000160159 ENSGT00510000047027.c.a ENSGT00950000183152.B.c.a Red-bellied piranha MODERN SPECIES 164 ENSPNAG00000016344 retsatl (ENSPNAG00000016329) CXorf38 (ENSPNAG00000016240) ENSPNAG00000016231 PCDH8 (ENSPNAG00000016218) CNMD (ENSPNAG00000016211) sugt1 (ENSPNAG00000003409) ENSPNAG00000016161 ednrba (ENSPNAG00000016141) MID1 (ENSPNAG00000016092) ARHGAP6 (ENSPNAG00000016069) MSL3 (ENSPNAG00000016028) ENSPNAG00000015948 chst10 (ENSPNAG00000015885) ENSPNAG00000015847 MAP4K4 (ENSPNAG00000015824) #22 ENSPNAG00000004815 ENSPNAG00000015423 cckbra (ENSPNAG00000015413) Mexicana tetra MODERN SPECIES 3 ENSAMXG00000033746 ENSAMXG00000026008 ENSAMXG00000026007 ENSAMXG00000005283 ENSAMXG00000037151 ENSAMXG00000026006 VANGL1 (ENSAMXG00000005275) CASQ2 (ENSAMXG00000038552) poglut1 (ENSAMXG00000040520) timmdc1 (ENSAMXG00000043134) zgc:172295 (ENSAMXG00000005230) zgc:64002 (ENSAMXG00000043311) ENSAMXG00000029524 chst10 (ENSAMXG00000033225) ENSAMXG00000005176 MAP4K4 (ENSAMXG00000005146) #22 ENSAMXG00000030058 ENSAMXG00000035162 ENSAMXG00000031145 cckbra (ENSAMXG00000008203) ENSAMXG00000038840 NALF1 (ENSAMXG00000039067) lig4 (ENSAMXG00000008192) irs2a (ENSAMXG00000025890) RAB20 (ENSAMXG00000032962) CARS2 (ENSAMXG00000008172) ING1 (ENSAMXG00000042640) UBE2A (ENSAMXG00000033516) ankrd10a (ENSAMXG00000041639) ENSAMXG00000032880 ENSAMXG00000036367 Electric eel MODERN SPECIES 175 zgc:153935 (ENSEEEG00000018939) ENSEEEG00000018938 pcdh8 (ENSEEEG00000018936) PCDH8 (ENSEEEG00000018929) CNMD (ENSEEEG00000018928) sugt1 (ENSEEEG00000018926) ENSEEEG00000018924 ednrba (ENSEEEG00000018922) MID1 (ENSEEEG00000018906) ARHGAP6 (ENSEEEG00000018903) MSL3 (ENSEEEG00000018898) ENSEEEG00000018882 PRPS2 (ENSEEEG00000018863) chst10 (ENSEEEG00000018858) ENSEEEG00000018857 ENSEEEG00000012258 #22 ENSEEEG00000011956 ENSEEEG00000011955 cckbra (ENSEEEG00000011954) NALF1 (ENSEEEG00000011952) lig4 (ENSEEEG00000011951) irs2a (ENSEEEG00000011950) RAB20 (ENSEEEG00000011949) CARS2 (ENSEEEG00000011938) ING1 (ENSEEEG00000011937) ENSEEEG00000011932 ankrd10a (ENSEEEG00000011931) ENSEEEG00000011927 ENSEEEG00000011926 cryaa (ENSEEEG00000011917) cbsa (ENSEEEG00000011913) Cyprinoidei ANCESTRAL SPECIES 147 ENSGT01100000263512.a.a.a.b.a.a ENSGT00440000033329.b.a.a ENSGT00940000155063.c.b #22 ENSGT00940000157358 ENSGT00970000198226 ENSGT00940000154706.rb.b ENSGT00390000005844.a.b ENSGT00440000034932 ENSGT00940000160529 ENSGT00940000165650.b ENSGT01060000249224.a ENSGT00390000004643 ENSGT00940000179752 ENSGT00950000182907.a.b.b.a.c ENSGT00940000155598.a ENSGT00390000017018.b ENSGT00390000011365.b.w.a ENSGT00390000005218 Cyprininae ANCESTRAL SPECIES 1185 ENSGT00440000033329.b.a.a.a ENSGT00940000155063.c.b #22 ENSGT01090000260082.d.a.b.s.b Cyprininae_a DUPLICATION Cyprininae_a ANCESTRAL SPECIES 796 ENSGT01100000263512.a.a.a.b.a.a ENSGT00440000033329.b.a.a.b ENSGT00940000155063.c.b.a #22 ENSGT01090000260082.d.a.b.s.b Golden-line barbel MODERN SPECIES 1087 pus7 (ENSSGRG00000037284) ednrba (ENSSGRG00000037273) ENSSGRG00000037271 MAP4K4 (ENSSGRG00000028837) #22 Common carp reference MODERN SPECIES 22 rpl24 (ENSCCRG00000082332) ENSCCRG00000059608 ENSCCRG00000069831 ENSCCRG00000022172 ENSCCRG00000071229 ENSCCRG00000009584 ENSCCRG00000081556 ENSCCRG00000068564 ENSCCRG00000059685 ENSCCRG00000040866 ENSCCRG00000049719 ENSCCRG00000075744 ENSCCRG00000063311 ENSCCRG00000082660 ENSCCRG00000039673 ENSCCRG00000063228 #22 ENSCCRG00000024724 ENSCCRG00000059538 ENSCCRG00000072518 ENSCCRG00000039798 ENSCCRG00000068845 ENSCCRG00000068901 ENSCCRG00000034967 poglut1 (ENSCCRG00000057234) ENSCCRG00000035914 zgc:172295 (ENSCCRG00000066794) ENSCCRG00000035945 ENSCCRG00000035917 ENSCCRG00000061673 ENSCCRG00000036582 ENSCCRG00000074214 Cyprininae_a ANCESTRAL SPECIES 461 ENSGT00440000033329.b.a.a.a ENSGT00940000155063.c.b.b #22 ENSGT00940000159316.v.a ENSGT01090000260082.d.a.b.s.a ENSGT00390000009178 ENSGT00940000164246.C.d.b ENSGT00940000164480.a.b.a ENSGT00390000012496.a.c ENSGT00390000019377.b.e.b ENSGT00940000158283.g ENSGT00390000013817.a.a ENSGT01000000214434.B.a.a.a.b ENSGT00390000011708.a.p ENSGT00550000074981.f ENSGT00980000198599.e.a ENSGT00940000162067.e ENSGT00390000006915.c.c.a.d Common carp reference MODERN SPECIES 27 ENSCCRG00000034956 pwp2h (ENSCCRG00000034888) ENSCCRG00000032237 zgc:172295 (ENSCCRG00000060184) ENSCCRG00000035141 poglut1 (ENSCCRG00000034984) ENSCCRG00000034681 ENSCCRG00000034427 ENSCCRG00000082187 ENSCCRG00000070647 ENSCCRG00000024283 ENSCCRG00000070025 ENSCCRG00000043337 ENSCCRG00000079166 ENSCCRG00000039653 ENSCCRG00000081028 #22 PSIP1 (ENSCCRG00000062862) bnc2 (ENSCCRG00000056219) CNTLN (ENSCCRG00000071812) sh3gl2a (ENSCCRG00000018054) ENSCCRG00000018048 ENSCCRG00000018046 trmo (ENSCCRG00000018039) ENSCCRG00000058756 anp32b (ENSCCRG00000065775) coro2aa (ENSCCRG00000017420) uso1 (ENSCCRG00000080512) g3bp2a (ENSCCRG00000077865) ints12 (ENSCCRG00000060317) ARHGEF38 (ENSCCRG00000007531) ppa2 (ENSCCRG00000079658) Golden-line barbel MODERN SPECIES 107 ENSSGRG00000051662 #22 ENSSGRG00000051584 ENSSGRG00000050058 ENSSGRG00000049937 ENSSGRG00000049936 ENSSGRG00000049935 ENSSGRG00000049933 ENSSGRG00000049932 poglut1 (ENSSGRG00000049685) timmdc1 (ENSSGRG00000049684) zgc:172295 (ENSSGRG00000049683) pwp2h (ENSSGRG00000049672) ENSSGRG00000049670 ENSSGRG00000049668 RAB9A (ENSSGRG00000049666) RAB9A (ENSSGRG00000049664) Otomorpha ANCESTRAL SPECIES ENSGT00940000155063.d #22 Clupeiformes ANCESTRAL SPECIES 46 ENSGT01030000235214 ENSGT00950000183072.b.b.b ENSGT00530000063779.A.e.b ENSGT00940000167474 ENSGT00940000156219.e.b ENSGT01030000234515.a.a.b.i ENSGT00940000157564 ENSGT00940000158665.d ENSGT00550000074800.a.b ENSGT00940000158859.f ENSGT00940000157954 ENSGT00390000007741.b ENSGT00940000159106 ENSGT00390000000227 ENSGT00950000183075.a.b ENSGT00940000155063.d #22 ENSGT00940000160673.g.b ENSGT00940000155526.i.a ENSGT00940000159309 ENSGT00940000159683 ENSGT00390000012728 ENSGT00950000183197.b.b Denticle herring DUPLICATION Denticle herring MODERN SPECIES 19 bbs5 (ENSDCDG00000003160) klhl41a (ENSDCDG00000003385) fastkd1 (ENSDCDG00000003397) ENSDCDG00000003427 phgdh (ENSDCDG00000003453) KLHL23 (ENSDCDG00000003633) mettl5 (ENSDCDG00000003657) ubr3 (ENSDCDG00000003663) ENSDCDG00000003675 #22 sp5a (ENSDCDG00000003689) GAD1 (ENSDCDG00000003695) TLK1 (ENSDCDG00000003785) ENSDCDG00000003795 ENSDCDG00000003799 mettl8 (ENSDCDG00000003813) dcaf17 (ENSDCDG00000003820) cybrd1 (ENSDCDG00000003832) si:dkey-69o16.5 (ENSDCDG00000003834) ihha (ENSDCDG00000003839) sp5a (ENSDCDG00000003850) GAD1 (ENSDCDG00000003857) TLK1 (ENSDCDG00000003872) ENSDCDG00000004074 mettl8 (ENSDCDG00000004079) Denticle herring MODERN SPECIES 218 ENSDCDG00000007616 #22 Otophysi ANCESTRAL SPECIES ENSGT00940000155063.d #22 Characiphysae ANCESTRAL SPECIES ENSGT00940000155063.d #22 Characiphysae_b ANCESTRAL SPECIES ENSGT00940000155063.d #22 Electric eel MODERN SPECIES 770 ENSEEEG00000022535 GALNT11 (ENSEEEG00000022519) GPR158 (ENSEEEG00000022515) anxa13 (ENSEEEG00000022512) ENSEEEG00000022510 #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000155063.d #22 Cyprininae ANCESTRAL SPECIES ENSGT00940000155063.d #22 Goldfish MODERN SPECIES 49 ENSCARG00000003503 ACVR1C (ENSCARG00000003603) CYTIP (ENSCARG00000003615) GALNT5 (ENSCARG00000003619) ENSCARG00000003620 nr4a2a (ENSCARG00000003626) KCNJ3 (ENSCARG00000003633) GALNT13 (ENSCARG00000003657) rprma (ENSCARG00000003699) prpf40a (ENSCARG00000004156) FMNL2 (ENSCARG00000009251) MYLK (ENSCARG00000009433) KALRN (ENSCARG00000010710) ENSCARG00000011001 ubr3 (ENSCARG00000011047) ENSCARG00000011686 #22 kif5aa (ENSCARG00000011716) ENSCARG00000011761 crfb4 (ENSCARG00000011783) crfb2 (ENSCARG00000011788) crfb1 (ENSCARG00000011800) ENSCARG00000011808 ENSCARG00000011812 ENSCARG00000011816 Osteoglossiformes ANCESTRAL SPECIES 90 ENSGT01050000244937.a.a ENSGT00390000010170.a.b ENSGT00390000012063 ENSGT00950000183115.b.a ENSGT00940000160136.p ENSGT00960000191502 ENSGT00550000075118 ENSGT00950000183097.a.a.b ENSGT00730000111163 ENSGT00390000006356 #18 ENSGT00950000183030 ENSGT00940000158977 ENSGT00940000154295 ENSGT00940000157128 ENSGT00440000033329.b.a.a ENSGT00940000155063 #22 ENSGT01090000259985.b.b.b.a.a.a ##23 ENSGT01090000259985.b.b.b.a.b ##23 ENSGT01090000259985.b.a.a.a #26 ENSGT00940000159316.ac ENSGT00940000155107.b.a ENSGT01090000260082.d.a.b ENSGT00940000156916 ENSGT00940000154633 ENSGT00530000063927.a.b ENSGT00730000111087 ENSGT00940000157358 ENSGT00940000157028 ENSGT01050000244864.B.b ENSGT01030000234513.B.b ENSGT00390000015473 P. kingsleyae MODERN SPECIES 268 med4 (ENSPKIG00000019950) itm2bb (ENSPKIG00000019925) ENSPKIG00000019899 ENSPKIG00000019875 alg11 (ENSPKIG00000019864) lcp1 (ENSPKIG00000019814) zc3h13 (ENSPKIG00000019756) cnot11 (ENSPKIG00000019709) #18 rpl31 (ENSPKIG00000019677) ENSPKIG00000019621 TBC1D8 (ENSPKIG00000019571) PDCL3 (ENSPKIG00000019544) ENSPKIG00000019537 chst10 (ENSPKIG00000019509) ENSPKIG00000019467 MAP4K4 (ENSPKIG00000019195) #22 ENSPKIG00000019089 ##23 ENSPKIG00000018986 ##23 ENSPKIG00000018896 #26 ENSPKIG00000018859 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 5 sucla2 (ENSSFOG00015002427) med4 (ENSSFOG00015002414) itm2bb (ENSSFOG00015002381) ENSSFOG00015002365 alg11 (ENSSFOG00015002331) lcp1 (ENSSFOG00015002251) zc3h13 (ENSSFOG00015030769) ENSSFOG00015002219 cnot11 (ENSSFOG00015002194) #18 rpl31 (ENSSFOG00015002156) TBC1D8 (ENSSFOG00015029672) PDCL3 (ENSSFOG00015002107) ENSSFOG00015028616 chst10 (ENSSFOG00015002063) LONRF2 (ENSSFOG00015002024) ENSSFOG00015001905 #22 ENSSFOG00015001897 ##23 ENSSFOG00015001772 ##23 ENSSFOG00015001683 #26 ENSSFOG00015031599 RDX (ENSSFOG00015001612) tlr22 (ENSSFOG00015001601) FDX1 (ENSSFOG00015001596) ARHGAP20 (ENSSFOG00015001580) ENSSFOG00015001576 ENSSFOG00015001556 mphosph8 (ENSSFOG00015001477) pspc1 (ENSSFOG00015001395) ZMYM2 (ENSSFOG00015001277) gja3 (ENSSFOG00015001241) ift88 (ENSSFOG00015001101) Asian bonytongue MODERN SPECIES 10 PRKAG2 (ENSSFOG00015009377) GALNT11 (ENSSFOG00015009344) KMT2C (ENSSFOG00015030733) XRCC2 (ENSSFOG00015009252) actr3b (ENSSFOG00015009213) ENSSFOG00015025902 DPP6 (ENSSFOG00015009065) ARHGAP21 (ENSSFOG00015008974) enkur (ENSSFOG00015018736) ENSSFOG00015018722 enkur (ENSSFOG00015027948) THNSL1 (ENSSFOG00015018709) GPR158 (ENSSFOG00015018686) anxa13 (ENSSFOG00015018640) ENSSFOG00015018633 ENSSFOG00015018308 #22 gad2 (ENSSFOG00015029023) ENSSFOG00015026839 apbb1ip (ENSSFOG00015017914) ENSSFOG00015017877 pdss1 (ENSSFOG00015017850) abi1a (ENSSFOG00015033206) acbd5a (ENSSFOG00015017701) mastl (ENSSFOG00015017658) YME1L1 (ENSSFOG00015017594) fasn2 (ENSSFOG00015017566) PTCHD3 (ENSSFOG00015017556) ODAD2 (ENSSFOG00015017363) mkxa (ENSSFOG00015017474) rab18a (ENSSFOG00015029084) PTCHD3 (ENSSFOG00015030980)