Euteleostomi	ANCESTRAL SPECIES	285			ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22
Sarcopterygii	ANCESTRAL SPECIES	194	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22
Tetrapoda	ANCESTRAL SPECIES	67	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Amniota	ANCESTRAL SPECIES	8	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Mammalia	ANCESTRAL SPECIES	16	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Theria	ANCESTRAL SPECIES	14	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Eutheria	ANCESTRAL SPECIES	12	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Boreoeutheria	ANCESTRAL SPECIES	3	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00990000207089	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Euarchontoglires	ANCESTRAL SPECIES	3	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00990000207089	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000163359	ENSGT00940000155786 #36
Primates	ANCESTRAL SPECIES	2	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Haplorrhini	ANCESTRAL SPECIES	12	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00910000147449	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Simiiformes	ANCESTRAL SPECIES	2	ENSGT00940000156145	ENSGT00550000074954.bb	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00910000147449	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Catarrhini	ANCESTRAL SPECIES	9	ENSGT00550000074954.bb	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00910000147449	ENSGT00940000159057 #20	ENSGT00910000147505 #21	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Cercopithecidae	ANCESTRAL SPECIES	7	ENSGT00940000159991.A	ENSGT00940000153883.a.a #9	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00950000182980.a.b.b.b.q.b #14	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00910000147449	ENSGT00940000159057 #20	ENSGT00910000147505 #21	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Rhinopithecus	ANCESTRAL SPECIES	42	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000153883.a.a #9	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00950000182980.a.b.b.b.q.b #14	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00910000147505 #21	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Black snub-nosed monkey	MODERN SPECIES	656	FOS (ENSRBIG00000036327) #7	JDP2 (ENSRBIG00000030082) #8	ENSRBIG00000036437 #9	BATF (ENSRBIG00000038010) #10	FLVCR2 (ENSRBIG00000038928) #11	ERG28 (ENSRBIG00000029268) #12	TTLL5 (ENSRBIG00000044481) #13	ENSRBIG00000033309 #14	TGFB3 (ENSRBIG00000037115) #15	IFT43 (ENSRBIG00000043094) #16	GPATCH2L (ENSRBIG00000031287) #17	ESRRB (ENSRBIG00000027867) #18	VASH1 (ENSRBIG00000041261) #19	ANGEL1 (ENSRBIG00000027844) #20	ENSRBIG00000042798 #21	LRRC74A (ENSRBIG00000031026) #22	IRF2BPL (ENSRBIG00000034968) #23	CIPC (ENSRBIG00000035374) #24	ZDHHC22 (ENSRBIG00000038054) #25	TMEM63C (ENSRBIG00000041778) #26	NGB (ENSRBIG00000038926) #27	POMT2 (ENSRBIG00000031307) #28	GSTZ1 (ENSRBIG00000037998) #29	TMED8 (ENSRBIG00000027982) #30	SAMD15 (ENSRBIG00000044642) #31	NOXRED1 (ENSRBIG00000027993) #32	VIPAS39 (ENSRBIG00000035835) #33	AHSA1 (ENSRBIG00000030569) #34	ISM2 (ENSRBIG00000038378) #35	SPTLC2 (ENSRBIG00000028828) #36	ALKBH1 (ENSRBIG00000026838) #37
Golden snub-nosed monkey	MODERN SPECIES	2365	FOS (ENSRROG00000038425) #7	JDP2 (ENSRROG00000000567) #8	ENSRROG00000034062 #9	BATF (ENSRROG00000041232) #10	FLVCR2 (ENSRROG00000042695) #11	ERG28 (ENSRROG00000043806) #12	TTLL5 (ENSRROG00000038675) #13	ENSRROG00000037942 #14	TGFB3 (ENSRROG00000005123) #15	IFT43 (ENSRROG00000036349) #16	GPATCH2L (ENSRROG00000031820) #17	ESRRB (ENSRROG00000034057) #18	VASH1 (ENSRROG00000034214) #19	ANGEL1 (ENSRROG00000037388) #20	ENSRROG00000035038 #21	LRRC74A (ENSRROG00000043657) #22	CIPC (ENSRROG00000041673) #24	ZDHHC22 (ENSRROG00000030738) #25	TMEM63C (ENSRROG00000044742) #26	NGB (ENSRROG00000044996) #27	POMT2 (ENSRROG00000027733) #28	GSTZ1 (ENSRROG00000039665) #29	TMED8 (ENSRROG00000042183) #30	SAMD15 (ENSRROG00000043173) #31	NOXRED1 (ENSRROG00000031371) #32	VIPAS39 (ENSRROG00000041576) #33	AHSA1 (ENSRROG00000039981) #34	ISM2 (ENSRROG00000035624) #35	SPTLC2 (ENSRROG00000041234) #36	ALKBH1 (ENSRROG00000041777) #37	ENSRROG00000036656
Cercopithecinae	ANCESTRAL SPECIES	2	ENSGT00940000155693 #8	ENSGT00940000159991.A	ENSGT00940000153883.a.a #9	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00950000182980.a.b.b.b.q.b #14	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00910000147449	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Cercopithecinae_a	ANCESTRAL SPECIES	1	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000153883.a.a #9	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00950000182980.a.b.b.b.q.b #14	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00910000147449	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Macaca	ANCESTRAL SPECIES	1	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000153883.a.a #9	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00950000182980.a.b.b.b.q.b.a #14	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00910000147449	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37	ENSGT00390000008624
Pig-tailed macaque	MODERN SPECIES	226											GPATCH2L (ENSMNEG00000035405) #17	ESRRB (ENSMNEG00000036637) #18	ENSMNEG00000030472	VASH1 (ENSMNEG00000012618) #19	ANGEL1 (ENSMNEG00000032987) #20	LRRC74A (ENSMNEG00000031633) #22	CIPC (ENSMNEG00000041542) #24	ZDHHC22 (ENSMNEG00000044912) #25	TMEM63C (ENSMNEG00000029319) #26	NGB (ENSMNEG00000039275) #27	POMT2 (ENSMNEG00000031322) #28	GSTZ1 (ENSMNEG00000033919) #29	TMED8 (ENSMNEG00000041945) #30	SAMD15 (ENSMNEG00000039873) #31	NOXRED1 (ENSMNEG00000030611) #32	VIPAS39 (ENSMNEG00000032226) #33	AHSA1 (ENSMNEG00000028318) #34	ISM2 (ENSMNEG00000015758) #35	SPTLC2 (ENSMNEG00000029939) #36	ALKBH1 (ENSMNEG00000033314) #37	SLIRP (ENSMNEG00000028921)
Macaca_a	ANCESTRAL SPECIES	2	ENSGT00940000167556.b.b.a.b.a.a.a.b.a.b.a.a.a.a	ENSGT00940000159276 #7	ENSGT01100000263493.a.b.a.a.a.b.a.a.b.b.a.b.a.b.a.a.a	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00950000182980.a.b.b.b.q.b.a #14	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT01100000263493.a.b.a.b.a.a.b.a.b.b.a.b.a.a.a	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Rhesus	MODERN SPECIES	17	TMED10 (ENSMMUG00000015168)	ENSMMUG00000052002	FOS (ENSMMUG00000040100) #7	ENSMMUG00000052410	JDP2 (ENSMMUG00000002797) #8	BATF (ENSMMUG00000003834) #10	FLVCR2 (ENSMMUG00000017665) #11	ERG28 (ENSMMUG00000012064) #12	TTLL5 (ENSMMUG00000012065) #13	TGFB3 (ENSMMUG00000012069) #15	IFT43 (ENSMMUG00000012070) #16	GPATCH2L (ENSMMUG00000008792) #17	ESRRB (ENSMMUG00000016773) #18	VASH1 (ENSMMUG00000018553) #19	ANGEL1 (ENSMMUG00000018551) #20	LRRC74A (ENSMMUG00000022904) #22	ENSMMUG00000056422	CIPC (ENSMMUG00000057021) #24	TMEM63C (ENSMMUG00000001092) #26	ZDHHC22 (ENSMMUG00000007561) #25	NGB (ENSMMUG00000048130) #27	POMT2 (ENSMMUG00000001095) #28	GSTZ1 (ENSMMUG00000001097) #29	TMED8 (ENSMMUG00000056541) #30	SAMD15 (ENSMMUG00000001099) #31	NOXRED1 (ENSMMUG00000056484) #32	VIPAS39 (ENSMMUG00000013551) #33	AHSA1 (ENSMMUG00000013554) #34	ISM2 (ENSMMUG00000013555) #35	SPTLC2 (ENSMMUG00000013556) #36	ALKBH1 (ENSMMUG00000023626) #37
Crab-eating macaque	MODERN SPECIES	17	JDP2 (ENSMFAG00000033637) #8	BATF (ENSMFAG00000031172) #10	FLVCR2 (ENSMFAG00000039606) #11	ENSMFAG00000053687	ERG28 (ENSMFAG00000000605) #12	TTLL5 (ENSMFAG00000029801) #13	ENSMFAG00000039878 #14	ENSMFAG00000056633	TGFB3 (ENSMFAG00000024879) #15	IFT43 (ENSMFAG00000033645) #16	GPATCH2L (ENSMFAG00000039835) #17	ESRRB (ENSMFAG00000000926) #18	ENSMFAG00000011451	VASH1 (ENSMFAG00000032260) #19	ANGEL1 (ENSMFAG00000045195) #20	LRRC74A (ENSMFAG00000046151) #22	ENSMFAG00000059936	CIPC (ENSMFAG00000035500) #24	TMEM63C (ENSMFAG00000003447) #26	ZDHHC22 (ENSMFAG00000061033) #25	NGB (ENSMFAG00000061162) #27	POMT2 (ENSMFAG00000043819) #28	GSTZ1 (ENSMFAG00000036081) #29	TMED8 (ENSMFAG00000065637) #30	SAMD15 (ENSMFAG00000037857) #31	NOXRED1 (ENSMFAG00000045091) #32	VIPAS39 (ENSMFAG00000004659) #33	AHSA1 (ENSMFAG00000039530) #34	ISM2 (ENSMFAG00000039426) #35	SPTLC2 (ENSMFAG00000040259) #36	ALKBH1 (ENSMFAG00000001551) #37
Cercopithecinae_b	ANCESTRAL SPECIES	8	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000153883.a.a #9	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00950000182980.a.b.b.b.q.b #14	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00910000147449	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Cercopithecinae_d	ANCESTRAL SPECIES	11	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000153883.a.a #9	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00950000182980.a.b.b.b.q.b #14	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00910000147449	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37	ENSGT00390000008624
Drill	MODERN SPECIES	975												ESRRB (ENSMLEG00000041209) #18	ENSMLEG00000033658	VASH1 (ENSMLEG00000040245) #19	ANGEL1 (ENSMLEG00000036323) #20	LRRC74A (ENSMLEG00000041219) #22	CIPC (ENSMLEG00000041893) #24	ZDHHC22 (ENSMLEG00000044242) #25	TMEM63C (ENSMLEG00000038196) #26	NGB (ENSMLEG00000035424) #27	POMT2 (ENSMLEG00000035192) #28	GSTZ1 (ENSMLEG00000034463) #29	TMED8 (ENSMLEG00000031136) #30	SAMD15 (ENSMLEG00000042158) #31	NOXRED1 (ENSMLEG00000030483) #32	VIPAS39 (ENSMLEG00000024785) #33	AHSA1 (ENSMLEG00000042077) #34	ISM2 (ENSMLEG00000039817) #35	SPTLC2 (ENSMLEG00000028697) #36	ALKBH1 (ENSMLEG00000033965) #37	SLIRP (ENSMLEG00000043644)
Sooty mangabey	MODERN SPECIES	165	FOS (ENSCATG00000044925) #7	JDP2 (ENSCATG00000041724) #8	ENSCATG00000031624 #9	BATF (ENSCATG00000032310) #10	FLVCR2 (ENSCATG00000001690) #11	ERG28 (ENSCATG00000027251) #12	TTLL5 (ENSCATG00000039057) #13	ENSCATG00000039187 #14	TGFB3 (ENSCATG00000024787) #15	IFT43 (ENSCATG00000043000) #16	GPATCH2L (ENSCATG00000044894) #17	ESRRB (ENSCATG00000030999) #18	VASH1 (ENSCATG00000019896) #19	ENSCATG00000036666	ANGEL1 (ENSCATG00000041296) #20	LRRC74A (ENSCATG00000043880) #22	CIPC (ENSCATG00000032735) #24	ZDHHC22 (ENSCATG00000031139) #25	TMEM63C (ENSCATG00000042839) #26	NGB (ENSCATG00000031640) #27	POMT2 (ENSCATG00000006857) #28	GSTZ1 (ENSCATG00000022787) #29	TMED8 (ENSCATG00000044508) #30	SAMD15 (ENSCATG00000040453) #31	NOXRED1 (ENSCATG00000040808) #32	VIPAS39 (ENSCATG00000043943) #33	AHSA1 (ENSCATG00000043020) #34	ISM2 (ENSCATG00000033085) #35	SPTLC2 (ENSCATG00000044471) #36	ALKBH1 (ENSCATG00000003846) #37	SLIRP (ENSCATG00000036327)
Olive baboon	MODERN SPECIES	17	TMED10 (ENSPANG00000019635)	FOS (ENSPANG00000020551) #7	JDP2 (ENSPANG00000019986) #8	BATF (ENSPANG00000021772) #10	ERG28 (ENSPANG00000022559) #12	FLVCR2 (ENSPANG00000017555) #11	ENSPANG00000030981 #14	TTLL5 (ENSPANG00000021771) #13	TGFB3 (ENSPANG00000020776) #15	IFT43 (ENSPANG00000024302) #16	ENSPANG00000038588	GPATCH2L (ENSPANG00000017554) #17	ESRRB (ENSPANG00000019985) #18	VASH1 (ENSPANG00000020966) #19	ANGEL1 (ENSPANG00000023844) #20	LRRC74A (ENSPANG00000019311) #22	ENSPANG00000047727	IRF2BPL (ENSPANG00000017190) #23	CIPC (ENSPANG00000031695) #24	ZDHHC22 (ENSPANG00000000713) #25	ENSPANG00000038563	TMEM63C (ENSPANG00000021770) #26	NGB (ENSPANG00000049261) #27	GSTZ1 (ENSPANG00000026012) #29	POMT2 (ENSPANG00000022436) #28	SAMD15 (ENSPANG00000015294) #31	NOXRED1 (ENSPANG00000017603) #32	VIPAS39 (ENSPANG00000018558) #33	AHSA1 (ENSPANG00000026009) #34	SPTLC2 (ENSPANG00000020454) #36	ALKBH1 (ENSPANG00000006979) #37
Vervet Monkey	MODERN SPECIES	16	ZC2HC1C (ENSCSAG00000012169)	NEK9 (ENSCSAG00000012158)	TMED10 (ENSCSAG00000012147)	FOS (ENSCSAG00000012136) #7	JDP2 (ENSCSAG00000012122) #8	BATF (ENSCSAG00000012114) #10	FLVCR2 (ENSCSAG00000012084) #11	ERG28 (ENSCSAG00000012045) #12	TTLL5 (ENSCSAG00000012037) #13	TGFB3 (ENSCSAG00000012003) #15	IFT43 (ENSCSAG00000011996) #16	GPATCH2L (ENSCSAG00000011988) #17	ESRRB (ENSCSAG00000011968) #18	VASH1 (ENSCSAG00000011944) #19	ANGEL1 (ENSCSAG00000011939) #20	LRRC74A (ENSCSAG00000011921) #22	IRF2BPL (ENSCSAG00000019574) #23	CIPC (ENSCSAG00000011881) #24	TMEM63C (ENSCSAG00000011869) #26	ZDHHC22 (ENSCSAG00000011855) #25	NGB (ENSCSAG00000011845) #27	POMT2 (ENSCSAG00000011826) #28	GSTZ1 (ENSCSAG00000011812) #29	TMED8 (ENSCSAG00000011803) #30	SAMD15 (ENSCSAG00000011797) #31	NOXRED1 (ENSCSAG00000011778) #32	VIPAS39 (ENSCSAG00000011767) #33	AHSA1 (ENSCSAG00000011755) #34	ISM2 (ENSCSAG00000011746) #35	SPTLC2 (ENSCSAG00000011741) #36	SLIRP (ENSCSAG00000011736)
Hominoidea	ANCESTRAL SPECIES	12	ENSGT00550000074954.bb	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00910000147449	ENSGT00940000159057 #20	ENSGT00910000147505 #21	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Hominidae	ANCESTRAL SPECIES	14	ENSGT00550000074954.bb	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00910000147449	ENSGT00940000159057 #20	ENSGT00910000147505 #21	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	12	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT00390000000153.l.a.cb.i.b.a.a	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00940000153654.tb.a	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00910000147505 #21	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Gorilla	MODERN SPECIES	5	BATF (ENSGGOG00000002267) #10	FLVCR2 (ENSGGOG00000009014) #11	ENSGGOG00000036834	ERG28 (ENSGGOG00000006493) #12	TTLL5 (ENSGGOG00000016703) #13	TGFB3 (ENSGGOG00000001481) #15	IFT43 (ENSGGOG00000001483) #16	ENSGGOG00000042391	GPATCH2L (ENSGGOG00000005602) #17	ESRRB (ENSGGOG00000002238) #18	ENSGGOG00000024523	ENSGGOG00000015155	VASH1 (ENSGGOG00000017033) #19	ENSGGOG00000041102 #21	ANGEL1 (ENSGGOG00000017040) #20	LRRC74A (ENSGGOG00000010758) #22	ENSGGOG00000040029	IRF2BPL (ENSGGOG00000002839) #23	CIPC (ENSGGOG00000036224) #24	ZDHHC22 (ENSGGOG00000010146) #25	TMEM63C (ENSGGOG00000006177) #26	NGB (ENSGGOG00000006195) #27	POMT2 (ENSGGOG00000006199) #28	GSTZ1 (ENSGGOG00000006215) #29	TMED8 (ENSGGOG00000013168) #30	SAMD15 (ENSGGOG00000022049) #31	NOXRED1 (ENSGGOG00000043069) #32	VIPAS39 (ENSGGOG00000016527) #33	AHSA1 (ENSGGOG00000007832) #34	ENSGGOG00000025400 #35	SPTLC2 (ENSGGOG00000011886) #36
Homo/Pan group	ANCESTRAL SPECIES	11	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT00390000000153.l.a.cb.i.b.a.a	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00940000153654.tb.a	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00910000147505 #21	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Human	MODERN SPECIES	5	ZC2HC1C (ENSG00000119703)	NEK9 (ENSG00000119638)	TMED10 (ENSG00000170348)	FOS (ENSG00000170345) #7	JDP2 (ENSG00000140044) #8	BATF (ENSG00000156127) #10	FLVCR2 (ENSG00000119686) #11	TTLL5 (ENSG00000119685) #13	ERG28 (ENSG00000133935) #12	IFT43 (ENSG00000119650) #16	TGFB3 (ENSG00000119699) #15	GPATCH2L (ENSG00000089916) #17	ESRRB (ENSG00000119715) #18	VASH1 (ENSG00000071246) #19	ANGEL1 (ENSG00000013523) #20	LRRC74A (ENSG00000100565) #22	IRF2BPL (ENSG00000119669) #23	CIPC (ENSG00000198894) #24	TMEM63C (ENSG00000165548) #26	ZDHHC22 (ENSG00000177108) #25	NGB (ENSG00000165553) #27	POMT2 (ENSG00000009830) #28	GSTZ1 (ENSG00000100577) #29	TMED8 (ENSG00000100580) #30	SAMD15 (ENSG00000100583) #31	NOXRED1 (ENSG00000165555) #32	VIPAS39 (ENSG00000151445) #33	AHSA1 (ENSG00000100591) #34	ISM2 (ENSG00000100593) #35	SPTLC2 (ENSG00000100596) #36	ALKBH1 (ENSG00000100601) #37
Pan	ANCESTRAL SPECIES	8	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT00390000000153.l.a.cb.i.b.a.a	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00940000153654.tb.a	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00910000147505 #21	ENSGT00940000154297.A #22	ENSGT00940000153314.a.b.a.k	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36
Chimpanzee	MODERN SPECIES	5	FOS (ENSPTRG00000047703) #7	JDP2 (ENSPTRG00000006555) #8	BATF (ENSPTRG00000006556) #10	FLVCR2 (ENSPTRG00000006557) #11	ENSPTRG00000045206	ERG28 (ENSPTRG00000006559) #12	TTLL5 (ENSPTRG00000006560) #13	TGFB3 (ENSPTRG00000006562) #15	IFT43 (ENSPTRG00000006563) #16	ENSPTRG00000043458	GPATCH2L (ENSPTRG00000006565) #17	ESRRB (ENSPTRG00000006566) #18	VASH1 (ENSPTRG00000048893) #19	ANGEL1 (ENSPTRG00000006569) #20	ENSPTRG00000045354 #21	LRRC74A (ENSPTRG00000006570) #22	ENSPTRG00000049396	CIPC (ENSPTRG00000052237) #24	ZDHHC22 (ENSPTRG00000039596) #25	TMEM63C (ENSPTRG00000006574) #26	NGB (ENSPTRG00000006575) #27	POMT2 (ENSPTRG00000006576) #28	GSTZ1 (ENSPTRG00000038857) #29	TMED8 (ENSPTRG00000006578) #30	SAMD15 (ENSPTRG00000006579) #31	NOXRED1 (ENSPTRG00000006580) #32	VIPAS39 (ENSPTRG00000006581) #33	AHSA1 (ENSPTRG00000006582) #34	ISM2 (ENSPTRG00000006583) #35	SPTLC2 (ENSPTRG00000006584) #36	ALKBH1 (ENSPTRG00000006586) #37
Bonobo	MODERN SPECIES	5	JDP2 (ENSPPAG00000039076) #8	BATF (ENSPPAG00000038433) #10	ENSPPAG00000024550	ENSPPAG00000035673 #11	ERG28 (ENSPPAG00000038048) #12	TTLL5 (ENSPPAG00000041206) #13	TGFB3 (ENSPPAG00000031753) #15	IFT43 (ENSPPAG00000035630) #16	ENSPPAG00000040454	GPATCH2L (ENSPPAG00000036494) #17	ESRRB (ENSPPAG00000035482) #18	ENSPPAG00000027182	VASH1 (ENSPPAG00000038241) #19	ENSPPAG00000018562 #21	ANGEL1 (ENSPPAG00000029410) #20	LRRC74A (ENSPPAG00000037806) #22	ENSPPAG00000040100	ENSPPAG00000041887	ENSPPAG00000035248 #23	CIPC (ENSPPAG00000042841) #24	ZDHHC22 (ENSPPAG00000009773) #25	TMEM63C (ENSPPAG00000034996) #26	NGB (ENSPPAG00000040520) #27	POMT2 (ENSPPAG00000029527) #28	GSTZ1 (ENSPPAG00000041126) #29	TMED8 (ENSPPAG00000032854) #30	SAMD15 (ENSPPAG00000043267) #31	NOXRED1 (ENSPPAG00000043757) #32	VIPAS39 (ENSPPAG00000034736) #33	AHSA1 (ENSPPAG00000024406) #34	ISM2 (ENSPPAG00000034070) #35
Orangutan	MODERN SPECIES	5	NEK9 (ENSPPYG00000006000)	TMED10 (ENSPPYG00000029389)	FOS (ENSPPYG00000006002) #7	JDP2 (ENSPPYG00000006004) #8	BATF (ENSPPYG00000006005) #10	FLVCR2 (ENSPPYG00000006006) #11	ERG28 (ENSPPYG00000006007) #12	TTLL5 (ENSPPYG00000006008) #13	TGFB3 (ENSPPYG00000006009) #15	IFT43 (ENSPPYG00000006010) #16	GPATCH2L (ENSPPYG00000006011) #17	ESRRB (ENSPPYG00000006012) #18	VASH1 (ENSPPYG00000006013) #19	ENSPPYG00000036070	ANGEL1 (ENSPPYG00000006014) #20	LRRC74A (ENSPPYG00000006015) #22	IRF2BPL (ENSPPYG00000029641) #23	CIPC (ENSPPYG00000036011) #24	ZDHHC22 (ENSPPYG00000031768) #25	TMEM63C (ENSPPYG00000006018) #26	NGB (ENSPPYG00000006019) #27	POMT2 (ENSPPYG00000006020) #28	ENSPPYG00000006021 #29	TMED8 (ENSPPYG00000006022) #30	SAMD15 (ENSPPYG00000006023) #31	NOXRED1 (ENSPPYG00000006024) #32	VIPAS39 (ENSPPYG00000006025) #33	AHSA1 (ENSPPYG00000006026) #34	SPTLC2 (ENSPPYG00000006028) #36	ALKBH1 (ENSPPYG00000006029) #37	ENSPPYG00000032999
Gibbon	MODERN SPECIES	14	ENSNLEG00000034123	JDP2 (ENSNLEG00000016475) #8	BATF (ENSNLEG00000016492) #10	ERG28 (ENSNLEG00000016519) #12	FLVCR2 (ENSNLEG00000016498) #11	ENSNLEG00000033370	TTLL5 (ENSNLEG00000016528) #13	TGFB3 (ENSNLEG00000016576) #15	ENSNLEG00000033016	IFT43 (ENSNLEG00000016594) #16	ENSNLEG00000029341	GPATCH2L (ENSNLEG00000016598) #17	ENSNLEG00000016611 #18	VASH1 (ENSNLEG00000016617) #19	ANGEL1 (ENSNLEG00000016631) #20	LRRC74A (ENSNLEG00000016644) #22	CIPC (ENSNLEG00000016660) #24	ZDHHC22 (ENSNLEG00000016663) #25	ENSNLEG00000034055	TMEM63C (ENSNLEG00000016664) #26	NGB (ENSNLEG00000016682) #27	POMT2 (ENSNLEG00000016688) #28	GSTZ1 (ENSNLEG00000016707) #29	TMED8 (ENSNLEG00000016726) #30	SAMD15 (ENSNLEG00000016728) #31	NOXRED1 (ENSNLEG00000016731) #32	VIPAS39 (ENSNLEG00000016738) #33	AHSA1 (ENSNLEG00000016745) #34	ENSNLEG00000029874 #35	SPTLC2 (ENSNLEG00000016756) #36	ALKBH1 (ENSNLEG00000016766) #37
Platyrrhini	ANCESTRAL SPECIES	4	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954.bb	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Cebidae	ANCESTRAL SPECIES	3	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954.bb	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Marmoset	MODERN SPECIES	1	FOS (ENSCJAG00000020633) #7	ENSCJAG00000085859	JDP2 (ENSCJAG00000020645) #8	BATF (ENSCJAG00000081507) #10	FLVCR2 (ENSCJAG00000020653) #11	ERG28 (ENSCJAG00000020659) #12	TTLL5 (ENSCJAG00000020665) #13	ENSCJAG00000077148	TGFB3 (ENSCJAG00000020680) #15	IFT43 (ENSCJAG00000020692) #16	ENSCJAG00000086204	GPATCH2L (ENSCJAG00000020696) #17	ESRRB (ENSCJAG00000020709) #18	VASH1 (ENSCJAG00000020720) #19	ANGEL1 (ENSCJAG00000020726) #20	LRRC74A (ENSCJAG00000020736) #22	ENSCJAG00000071989	IRF2BPL (ENSCJAG00000016689) #23	CIPC (ENSCJAG00000046132) #24	ZDHHC22 (ENSCJAG00000043263) #25	TMEM63C (ENSCJAG00000016712) #26	POMT2 (ENSCJAG00000016739) #28	ENSCJAG00000016778 #29	TMED8 (ENSCJAG00000016788) #30	SAMD15 (ENSCJAG00000016793) #31	NOXRED1 (ENSCJAG00000016798) #32	VIPAS39 (ENSCJAG00000016801) #33	AHSA1 (ENSCJAG00000016837) #34	ISM2 (ENSCJAG00000016880) #35	SPTLC2 (ENSCJAG00000016903) #36	ENSCJAG00000016933
Cebidae_a	ANCESTRAL SPECIES	4	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954.bb	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A.a #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955.d #33	ENSGT00390000013955.c #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36
Bolivian squirrel monkey	MODERN SPECIES	52	ENSSBOG00000022826	FOS (ENSSBOG00000021663) #7	AIF1 (ENSSBOG00000020993)	JDP2 (ENSSBOG00000033222) #8	BATF (ENSSBOG00000034354) #10	ENSSBOG00000006701	FLVCR2 (ENSSBOG00000030433) #11	ERG28 (ENSSBOG00000019224) #12	TTLL5 (ENSSBOG00000027627) #13	TGFB3 (ENSSBOG00000032025) #15	IFT43 (ENSSBOG00000021074) #16	GPATCH2L (ENSSBOG00000021130) #17	ESRRB (ENSSBOG00000036031) #18	VASH1 (ENSSBOG00000022830) #19	ANGEL1 (ENSSBOG00000007093) #20	LRRC74A (ENSSBOG00000022032) #22	IRF2BPL (ENSSBOG00000034123) #23	CIPC (ENSSBOG00000034845) #24	ZDHHC22 (ENSSBOG00000023116) #25	TMEM63C (ENSSBOG00000000690) #26	NGB (ENSSBOG00000035897) #27	POMT2 (ENSSBOG00000036190) #28	GSTZ1 (ENSSBOG00000031776) #29	TMED8 (ENSSBOG00000028885) #30	SAMD15 (ENSSBOG00000031254) #31	NOXRED1 (ENSSBOG00000023408) #32	ENSSBOG00000009266	VIPAS39 (ENSSBOG00000029151) #33	AHSA1 (ENSSBOG00000028253) #34	ISM2 (ENSSBOG00000024120) #35	SPTLC2 (ENSSBOG00000029378) #36
Capuchin	MODERN SPECIES	54	JDP2 (ENSCCAG00000029129) #8	BATF (ENSCCAG00000037730) #10	ERG28 (ENSCCAG00000033804) #12	FLVCR2 (ENSCCAG00000022530) #11	ENSCCAG00000029450	TTLL5 (ENSCCAG00000032726) #13	TGFB3 (ENSCCAG00000024389) #15	ENSCCAG00000023000	IFT43 (ENSCCAG00000019476) #16	GPATCH2L (ENSCCAG00000034431) #17	ENSCCAG00000031372 #18	ENSCCAG00000036581	ENSCCAG00000010072	VASH1 (ENSCCAG00000032528) #19	ANGEL1 (ENSCCAG00000035390) #20	LRRC74A (ENSCCAG00000030201) #22	CIPC (ENSCCAG00000020890) #24	ZDHHC22 (ENSCCAG00000030351) #25	TMEM63C (ENSCCAG00000025503) #26	NGB (ENSCCAG00000020944) #27	POMT2 (ENSCCAG00000034663) #28	GSTZ1 (ENSCCAG00000014463) #29	TMED8 (ENSCCAG00000024623) #30	SAMD15 (ENSCCAG00000013054) #31	NOXRED1 (ENSCCAG00000025957) #32	ENSCCAG00000035698 #33	AHSA1 (ENSCCAG00000036772) #34	ISM2 (ENSCCAG00000029517) #35	SPTLC2 (ENSCCAG00000020293) #36	ALKBH1 (ENSCCAG00000037198) #37	SLIRP (ENSCCAG00000030130)
Mas night monkey	MODERN SPECIES	821														VASH1 (ENSANAG00000033503) #19	ANGEL1 (ENSANAG00000023393) #20	LRRC74A (ENSANAG00000030648) #22	IRF2BPL (ENSANAG00000035506) #23	CIPC (ENSANAG00000019630) #24	ZDHHC22 (ENSANAG00000029261) #25	TMEM63C (ENSANAG00000033389) #26	NGB (ENSANAG00000022420) #27	POMT2 (ENSANAG00000036112) #28	GSTZ1 (ENSANAG00000028991) #29	TMED8 (ENSANAG00000022582) #30	SAMD15 (ENSANAG00000000020) #31	NOXRED1 (ENSANAG00000028171) #32	VIPAS39 (ENSANAG00000030960) #33	AHSA1 (ENSANAG00000031390) #34	ISM2 (ENSANAG00000034837) #35	SPTLC2 (ENSANAG00000032812) #36	ALKBH1 (ENSANAG00000023679) #37
Tarsier	MODERN SPECIES	3526											ENSTSYG00000026188	ENSTSYG00000037052	VASH1 (ENSTSYG00000002131) #19	ENSTSYG00000029864	ANGEL1 (ENSTSYG00000011919) #20	LRRC74A (ENSTSYG00000030964) #22
Strepsirrhini	ANCESTRAL SPECIES	2	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Lemuriformes	ANCESTRAL SPECIES	28	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Lemuriformes_a	ANCESTRAL SPECIES	11	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Coquerels sifaka	MODERN SPECIES	653	ZC2HC1C (ENSPCOG00000017757)	NEK9 (ENSPCOG00000027956)	TMED10 (ENSPCOG00000022239)	FOS (ENSPCOG00000000082) #7	JDP2 (ENSPCOG00000018857) #8	BATF (ENSPCOG00000025160) #10	FLVCR2 (ENSPCOG00000028565) #11	ERG28 (ENSPCOG00000021093) #12	TTLL5 (ENSPCOG00000023679) #13	TGFB3 (ENSPCOG00000014765) #15	IFT43 (ENSPCOG00000013874) #16	GPATCH2L (ENSPCOG00000023628) #17	ESRRB (ENSPCOG00000028573) #18	VASH1 (ENSPCOG00000028571) #19	ANGEL1 (ENSPCOG00000016541) #20	LRRC74A (ENSPCOG00000005111) #22	CIPC (ENSPCOG00000025783) #24	ZDHHC22 (ENSPCOG00000019637) #25	TMEM63C (ENSPCOG00000024609) #26	NGB (ENSPCOG00000023371) #27	POMT2 (ENSPCOG00000017534) #28	GSTZ1 (ENSPCOG00000023109) #29	TMED8 (ENSPCOG00000025270) #30	ENSPCOG00000003305 #31	NOXRED1 (ENSPCOG00000017540) #32	ENSPCOG00000023705 #33	AHSA1 (ENSPCOG00000019822) #34	ENSPCOG00000015267 #36	ENSPCOG00000016545	ALKBH1 (ENSPCOG00000027372) #37	SLIRP (ENSPCOG00000015159)
Greater bamboo lemur	MODERN SPECIES	403								TTLL5 (ENSPSMG00000010706) #13	ENSPSMG00000010748	TGFB3 (ENSPSMG00000010763) #15	IFT43 (ENSPSMG00000010769) #16	GPATCH2L (ENSPSMG00000010793) #17	ESRRB (ENSPSMG00000010826) #18	VASH1 (ENSPSMG00000010837) #19	ANGEL1 (ENSPSMG00000010876) #20	LRRC74A (ENSPSMG00000010893) #22	IRF2BPL (ENSPSMG00000010899) #23	CIPC (ENSPSMG00000010911) #24	ZDHHC22 (ENSPSMG00000010918) #25	TMEM63C (ENSPSMG00000010991) #26	NGB (ENSPSMG00000011006) #27	POMT2 (ENSPSMG00000011025) #28	GSTZ1 (ENSPSMG00000011070) #29	TMED8 (ENSPSMG00000011077) #30	SAMD15 (ENSPSMG00000011089) #31	NOXRED1 (ENSPSMG00000011094) #32	VIPAS39 (ENSPSMG00000011206) #33	AHSA1 (ENSPSMG00000011273) #34	ENSPSMG00000011285	ENSPSMG00000011294 #36
Mouse lemur	MODERN SPECIES	22	NEK9 (ENSMICG00000015999)	TMED10 (ENSMICG00000016016)	FOS (ENSMICG00000016026) #7	JDP2 (ENSMICG00000029702) #8	BATF (ENSMICG00000029066) #10	FLVCR2 (ENSMICG00000016055) #11	ERG28 (ENSMICG00000016077) #12	TTLL5 (ENSMICG00000016085) #13	TGFB3 (ENSMICG00000016110) #15	ENSMICG00000006352	GPATCH2L (ENSMICG00000006355) #17	ESRRB (ENSMICG00000003618) #18	VASH1 (ENSMICG00000003625) #19	ENSMICG00000017849	ANGEL1 (ENSMICG00000003631) #20	LRRC74A (ENSMICG00000003650) #22	CIPC (ENSMICG00000045982) #24	TMEM63C (ENSMICG00000017135) #26	ZDHHC22 (ENSMICG00000017130) #25	NGB (ENSMICG00000044678) #27	POMT2 (ENSMICG00000017148) #28	GSTZ1 (ENSMICG00000017159) #29	TMED8 (ENSMICG00000047714) #30	ENSMICG00000017168	NOXRED1 (ENSMICG00000017170) #32	VIPAS39 (ENSMICG00000009084) #33	AHSA1 (ENSMICG00000009097) #34	SPTLC2 (ENSMICG00000009115) #36	ALKBH1 (ENSMICG00000030789) #37	SLIRP (ENSMICG00000012080)	ENSMICG00000012081
Bushbaby	MODERN SPECIES	135	NEK9 (ENSOGAG00000008245)	TMED10 (ENSOGAG00000028272)	FOS (ENSOGAG00000032356) #7	JDP2 (ENSOGAG00000024796) #8	BATF (ENSOGAG00000010133) #10	FLVCR2 (ENSOGAG00000010134) #11	ERG28 (ENSOGAG00000009368) #12	TTLL5 (ENSOGAG00000009371) #13	TGFB3 (ENSOGAG00000009386) #15	ENSOGAG00000034452	GPATCH2L (ENSOGAG00000009392) #17	ENSOGAG00000032435	ESRRB (ENSOGAG00000008646) #18	VASH1 (ENSOGAG00000000669) #19	ANGEL1 (ENSOGAG00000000180) #20	LRRC74A (ENSOGAG00000026924) #22	IRF2BPL (ENSOGAG00000034922) #23	ENSOGAG00000027649	CIPC (ENSOGAG00000025881) #24	ZDHHC22 (ENSOGAG00000030482) #25	ENSOGAG00000027411	TMEM63C (ENSOGAG00000006191) #26	NGB (ENSOGAG00000006194) #27	POMT2 (ENSOGAG00000006197) #28	GSTZ1 (ENSOGAG00000006199) #29	TMED8 (ENSOGAG00000006200) #30	SAMD15 (ENSOGAG00000006201) #31	NOXRED1 (ENSOGAG00000006204) #32	ENSOGAG00000006205 #33	AHSA1 (ENSOGAG00000006207) #34	ISM2 (ENSOGAG00000032748) #35
Euarchontoglires_A	ANCESTRAL SPECIES	3	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00990000207089	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000163359	ENSGT00940000155786 #36
Tree shrew	MODERN SPECIES	5974																ENSTBEG00000012780 #22
Glires	ANCESTRAL SPECIES	12	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00990000207089	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000163359	ENSGT00940000155786 #36
Rodentia	ANCESTRAL SPECIES	3	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000163359	ENSGT00940000155786 #36
Rodentia_A	ANCESTRAL SPECIES	2	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Hystricomorpha	ANCESTRAL SPECIES	33	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144.d.a #34	ENSGT00940000162809 #35	ENSGT00940000163359	ENSGT00940000155786 #36
Naked mole-rat female	MODERN SPECIES	18	ENSHGLG00000012043	JDP2 (ENSHGLG00000046590) #8	ENSHGLG00000034007	ENSHGLG00000032847	BATF (ENSHGLG00000009995) #10	FLVCR2 (ENSHGLG00000012149) #11	ERG28 (ENSHGLG00000035965) #12	ENSHGLG00000009260	TGFB3 (ENSHGLG00000041469) #15	IFT43 (ENSHGLG00000006159) #16	GPATCH2L (ENSHGLG00000011249) #17	ESRRB (ENSHGLG00000007373) #18	ENSHGLG00000009813	VASH1 (ENSHGLG00000014181) #19	ANGEL1 (ENSHGLG00000019080) #20	LRRC74A (ENSHGLG00000013955) #22	IRF2BPL (ENSHGLG00000036168) #23	CIPC (ENSHGLG00000041872) #24	ZDHHC22 (ENSHGLG00000033008) #25	TMEM63C (ENSHGLG00000017991) #26	Ngb (ENSHGLG00000040246) #27	POMT2 (ENSHGLG00000018050) #28	GSTZ1 (ENSHGLG00000016650) #29	ENSHGLG00000046850	TMED8 (ENSHGLG00000018488) #30	SAMD15 (ENSHGLG00000019246) #31	NOXRED1 (ENSHGLG00000019057) #32	VIPAS39 (ENSHGLG00000015244) #33	ENSHGLG00000013738 #34	ISM2 (ENSHGLG00000015173) #35	SPTLC2 (ENSHGLG00000015768) #36
Hystricomorpha_a	ANCESTRAL SPECIES	27	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144.d.a #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Guinea pig	MODERN SPECIES	20	NEK9 (ENSCPOG00000003990)	TMED10 (ENSCPOG00000004567)	FOS (ENSCPOG00000033284) #7	ENSCPOG00000039224	JDP2 (ENSCPOG00000037507) #8	BATF (ENSCPOG00000039637) #10	FLVCR2 (ENSCPOG00000005615) #11	ERG28 (ENSCPOG00000005620) #12	ENSCPOG00000005623	TGFB3 (ENSCPOG00000034182) #15	IFT43 (ENSCPOG00000035589) #16	GPATCH2L (ENSCPOG00000007359) #17	ESRRB (ENSCPOG00000025190) #18	VASH1 (ENSCPOG00000010147) #19	ANGEL1 (ENSCPOG00000011475) #20	LRRC74A (ENSCPOG00000011481) #22	IRF2BPL (ENSCPOG00000026021) #23	CIPC (ENSCPOG00000032434) #24	ZDHHC22 (ENSCPOG00000020412) #25	ENSCPOG00000032954	TMEM63C (ENSCPOG00000007074) #26	NGB (ENSCPOG00000009244) #27	POMT2 (ENSCPOG00000007085) #28	GSTZ1 (ENSCPOG00000001608) #29	TMED8 (ENSCPOG00000001610) #30	VIPAS39 (ENSCPOG00000006537) #33	AHSA1 (ENSCPOG00000006546) #34	SPTLC2 (ENSCPOG00000001497) #36	ALKBH1 (ENSCPOG00000001498) #37	ENSCPOG00000001500	SNW1 (ENSCPOG00000010645)
Hystricomorpha_b	ANCESTRAL SPECIES	70						ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144.d.a #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37	ENSGT00940000164270
Long-tailed chinchilla	MODERN SPECIES	145										TGFB3 (ENSCLAG00000008424) #15	IFT43 (ENSCLAG00000012424) #16	GPATCH2L (ENSCLAG00000010699) #17	ESRRB (ENSCLAG00000012721) #18	VASH1 (ENSCLAG00000011500) #19	ANGEL1 (ENSCLAG00000012161) #20	LRRC74A (ENSCLAG00000008596) #22	CIPC (ENSCLAG00000010861) #24	ZDHHC22 (ENSCLAG00000009027) #25	TMEM63C (ENSCLAG00000014693) #26	NGB (ENSCLAG00000006549) #27	POMT2 (ENSCLAG00000008350) #28	GSTZ1 (ENSCLAG00000009346) #29	TMED8 (ENSCLAG00000007131) #30	ENSCLAG00000012668 #31	NOXRED1 (ENSCLAG00000012146) #32	VIPAS39 (ENSCLAG00000011842) #33	AHSA1 (ENSCLAG00000011162) #34	ENSCLAG00000014317	SPTLC2 (ENSCLAG00000012487) #36	ALKBH1 (ENSCLAG00000014129) #37	ENSCLAG00000008545
Degu	MODERN SPECIES	48	SLC8A3 (ENSODEG00000013865)	SYNJ2BP (ENSODEG00000014092)	FLVCR2 (ENSODEG00000013854) #11	ERG28 (ENSODEG00000013861) #12	ENSODEG00000012504	ENSODEG00000013591 #13	TGFB3 (ENSODEG00000013103) #15	IFT43 (ENSODEG00000013768) #16	ENSODEG00000012743	GPATCH2L (ENSODEG00000013474) #17	ENSODEG00000013347	ESRRB (ENSODEG00000013419) #18	VASH1 (ENSODEG00000012506) #19	ENSODEG00000019977	ANGEL1 (ENSODEG00000012416) #20	LRRC74A (ENSODEG00000013756) #22	CIPC (ENSODEG00000012302) #24	ZDHHC22 (ENSODEG00000016163) #25	TMEM63C (ENSODEG00000013078) #26	ENSODEG00000011875 #27	ENSODEG00000014820 #27	POMT2 (ENSODEG00000012188) #28	GSTZ1 (ENSODEG00000012019) #29	TMED8 (ENSODEG00000012850) #30	NOXRED1 (ENSODEG00000013652) #32	VIPAS39 (ENSODEG00000013197) #33	ENSODEG00000012594 #34	ISM2 (ENSODEG00000012212) #35	ENSODEG00000011748 #36	ENSODEG00000012574	SLIRP (ENSODEG00000012580)
Sciuridae	ANCESTRAL SPECIES	8	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Marmotini	ANCESTRAL SPECIES	27	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Marmotini_b	ANCESTRAL SPECIES	31	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Arctic ground squirrel	MODERN SPECIES	8	ZC2HC1C (ENSUPAG00010014064)	NEK9 (ENSUPAG00010014023)	TMED10 (ENSUPAG00010014006)	FOS (ENSUPAG00010013998) #7	JDP2 (ENSUPAG00010013987) #8	ENSUPAG00010013983	BATF (ENSUPAG00010013971) #10	FLVCR2 (ENSUPAG00010013953) #11	ERG28 (ENSUPAG00010013948) #12	ENSUPAG00010013566	TGFB3 (ENSUPAG00010013546) #15	IFT43 (ENSUPAG00010013527) #16	ESRRB (ENSUPAG00010013373) #18	VASH1 (ENSUPAG00010013354) #19	ANGEL1 (ENSUPAG00010013343) #20	LRRC74A (ENSUPAG00010013324) #22	IRF2BPL (ENSUPAG00010013317) #23	CIPC (ENSUPAG00010013300) #24	ZDHHC22 (ENSUPAG00010013295) #25	TMEM63C (ENSUPAG00010013239) #26	NGB (ENSUPAG00010013224) #27	POMT2 (ENSUPAG00010013189) #28	GSTZ1 (ENSUPAG00010013158) #29	TMED8 (ENSUPAG00010013150) #30	ENSUPAG00010013142 #31	NOXRED1 (ENSUPAG00010013131) #32	VIPAS39 (ENSUPAG00010012970) #33	AHSA1 (ENSUPAG00010012957) #34	ENSUPAG00010012949	SPTLC2 (ENSUPAG00010012911) #36	ALKBH1 (ENSUPAG00010012895) #37
Squirrel	MODERN SPECIES	88	ZC2HC1C (ENSSTOG00000007331)	NEK9 (ENSSTOG00000007339)	ENSSTOG00000007392	FOS (ENSSTOG00000003005) #7	JDP2 (ENSSTOG00000026831) #8	BATF (ENSSTOG00000024626) #10	FLVCR2 (ENSSTOG00000014389) #11	ERG28 (ENSSTOG00000014394) #12	TTLL5 (ENSSTOG00000014397) #13	TGFB3 (ENSSTOG00000028492) #15	IFT43 (ENSSTOG00000014423) #16	GPATCH2L (ENSSTOG00000015086) #17	ESRRB (ENSSTOG00000028550) #18	VASH1 (ENSSTOG00000021153) #19	ANGEL1 (ENSSTOG00000011127) #20	LRRC74A (ENSSTOG00000007726) #22	IRF2BPL (ENSSTOG00000026594) #23	CIPC (ENSSTOG00000020667) #24	ZDHHC22 (ENSSTOG00000000662) #25	TMEM63C (ENSSTOG00000029045) #26	NGB (ENSSTOG00000024597) #27	POMT2 (ENSSTOG00000002757) #28	GSTZ1 (ENSSTOG00000002793) #29	TMED8 (ENSSTOG00000002808) #30	ENSSTOG00000028225 #31	NOXRED1 (ENSSTOG00000003169) #32	VIPAS39 (ENSSTOG00000003177) #33	AHSA1 (ENSSTOG00000003196) #34	ISM2 (ENSSTOG00000003218) #35	SPTLC2 (ENSSTOG00000003237) #36	ENSSTOG00000029513
Alpin marmot	MODERN SPECIES	1	ZC2HC1C (ENSMMMG00000018927)	NEK9 (ENSMMMG00000018929)	TMED10 (ENSMMMG00000018955)	FOS (ENSMMMG00000018959) #7	JDP2 (ENSMMMG00000018991) #8	BATF (ENSMMMG00000018997) #10	FLVCR2 (ENSMMMG00000019011) #11	ERG28 (ENSMMMG00000019015) #12	ENSMMMG00000019046	TGFB3 (ENSMMMG00000019151) #15	IFT43 (ENSMMMG00000019160) #16	GPATCH2L (ENSMMMG00000019187) #17	ESRRB (ENSMMMG00000019197) #18	VASH1 (ENSMMMG00000019229) #19	ANGEL1 (ENSMMMG00000019233) #20	LRRC74A (ENSMMMG00000019265) #22	CIPC (ENSMMMG00000019276) #24	ZDHHC22 (ENSMMMG00000019284) #25	TMEM63C (ENSMMMG00000019292) #26	NGB (ENSMMMG00000019333) #27	POMT2 (ENSMMMG00000019338) #28	GSTZ1 (ENSMMMG00000019354) #29	TMED8 (ENSMMMG00000019376) #30	SAMD15 (ENSMMMG00000019382) #31	NOXRED1 (ENSMMMG00000019392) #32	VIPAS39 (ENSMMMG00000019405) #33	AHSA1 (ENSMMMG00000019472) #34	ENSMMMG00000019476	SPTLC2 (ENSMMMG00000019481) #36	ALKBH1 (ENSMMMG00000019488) #37	ENSMMMG00000019496
Eurasian red squirrel	MODERN SPECIES	11	ZC2HC1C (ENSSVLG00005023028)	NEK9 (ENSSVLG00005022971)	TMED10 (ENSSVLG00005022941)	FOS (ENSSVLG00005022864) #7	JDP2 (ENSSVLG00005022819) #8	BATF (ENSSVLG00005022782) #10	ERG28 (ENSSVLG00005022750) #12	FLVCR2 (ENSSVLG00005022704) #11	TTLL5 (ENSSVLG00005022638) #13	TGFB3 (ENSSVLG00005022514) #15	IFT43 (ENSSVLG00005022465) #16	GPATCH2L (ENSSVLG00005022307) #17	ESRRB (ENSSVLG00005022191) #18	VASH1 (ENSSVLG00005022110) #19	ANGEL1 (ENSSVLG00005022057) #20	LRRC74A (ENSSVLG00005021852) #22	IRF2BPL (ENSSVLG00005021825) #23	ENSSVLG00005021797	CIPC (ENSSVLG00005021759) #24	ZDHHC22 (ENSSVLG00005021729) #25	TMEM63C (ENSSVLG00005021578) #26	NGB (ENSSVLG00005021519) #27	POMT2 (ENSSVLG00005021476) #28	GSTZ1 (ENSSVLG00005021308) #29	TMED8 (ENSSVLG00005021193) #30	ENSSVLG00005021172 #31	NOXRED1 (ENSSVLG00005021090) #32	VIPAS39 (ENSSVLG00005020602) #33	AHSA1 (ENSSVLG00005020413) #34	ENSSVLG00005020393	SPTLC2 (ENSSVLG00005020285) #36
Rodentia_B	ANCESTRAL SPECIES	7	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Kangaroo rat	MODERN SPECIES	321	Zc2hc1c (ENSDORG00000004895)	Nek9 (ENSDORG00000004896)	Tmed10 (ENSDORG00000012999)	Fos (ENSDORG00000024479) #7	Jdp2 (ENSDORG00000026956) #8	Batf (ENSDORG00000026541) #10	Flvcr2 (ENSDORG00000012890) #11	Erg28 (ENSDORG00000012893) #12	ENSDORG00000012894 #13	Tgfb3 (ENSDORG00000012897) #15	Ift43 (ENSDORG00000012899) #16	Gpatch2l (ENSDORG00000000797) #17	Esrrb (ENSDORG00000000122) #18	Vash1 (ENSDORG00000029177) #19	Angel1 (ENSDORG00000007719) #20	Lrrc74a (ENSDORG00000007720) #22	Irf2bpl (ENSDORG00000001062) #23	Cipc (ENSDORG00000013110) #24	Zdhhc22 (ENSDORG00000013114) #25	Tmem63c (ENSDORG00000003503) #26	Ngb (ENSDORG00000003505) #27	Pomt2 (ENSDORG00000003506) #28	Gstz1 (ENSDORG00000003512) #29	Tmed8 (ENSDORG00000023627) #30	Vipas39 (ENSDORG00000025902) #33	ENSDORG00000025511 #34	ENSDORG00000012971	Sptlc2 (ENSDORG00000008490) #36	Alkbh1 (ENSDORG00000012377) #37	Slirp (ENSDORG00000012379)	ENSDORG00000012380
Myomorpha	ANCESTRAL SPECIES	7	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Muroidea	ANCESTRAL SPECIES	16	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Muroidea_A	ANCESTRAL SPECIES	15	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Cricetidae	ANCESTRAL SPECIES	17	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Cricetinae	ANCESTRAL SPECIES	11	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Golden Hamster	MODERN SPECIES	776										ENSMAUG00000015420	Tgfb3 (ENSMAUG00000006069) #15	Gpatch2l (ENSMAUG00000012940) #17	Esrrb (ENSMAUG00000000337) #18	Vash1 (ENSMAUG00000018731) #19	Angel1 (ENSMAUG00000015525) #20	Lrrc74a (ENSMAUG00000000421) #22	Irf2bpl (ENSMAUG00000002452) #23	Cipc (ENSMAUG00000021956) #24	Zdhhc22 (ENSMAUG00000009028) #25	Tmem63c (ENSMAUG00000002126) #26	Ngb (ENSMAUG00000012779) #27	Pomt2 (ENSMAUG00000007220) #28	Tmed8 (ENSMAUG00000015810) #30	ENSMAUG00000016184 #31	Noxred1 (ENSMAUG00000010265) #32	Vipas39 (ENSMAUG00000015727) #33	Ism2 (ENSMAUG00000014026) #35	Sptlc2 (ENSMAUG00000017108) #36	Alkbh1 (ENSMAUG00000012502) #37	Slirp (ENSMAUG00000003857)	Snw1 (ENSMAUG00000016972)
Chinese hamster chok1gshd	MODERN SPECIES	2	Zc2hc1c (ENSCGRG00001022271)	Nek9 (ENSCGRG00001020024)	Tmed10 (ENSCGRG00001009122)	Fos (ENSCGRG00001006758) #7	Jdp2 (ENSCGRG00001014531) #8	Batf (ENSCGRG00001012598) #10	Flvcr2 (ENSCGRG00001011591) #11	Erg28 (ENSCGRG00001009404) #12	Ttll5 (ENSCGRG00001012708)	Tgfb3 (ENSCGRG00001009726) #15	Ift43 (ENSCGRG00001005198) #16	Gpatch2l (ENSCGRG00001000637) #17	Esrrb (ENSCGRG00001014668) #18	Vash1 (ENSCGRG00001006114) #19	Angel1 (ENSCGRG00001002965) #20	Lrrc74a (ENSCGRG00001000662) #22	Irf2bpl (ENSCGRG00001024769) #23	Cipc (ENSCGRG00001024574) #24	Zdhhc22 (ENSCGRG00001022588) #25	Tmem63c (ENSCGRG00001017500) #26	Ngb (ENSCGRG00001024162) #27	Pomt2 (ENSCGRG00001013125) #28	Gstz1 (ENSCGRG00001009432) #29	Tmed8 (ENSCGRG00001007964) #30	ENSCGRG00001003986 #31	Noxred1 (ENSCGRG00001023719) #32	Vipas39 (ENSCGRG00001021975) #33	Ahsa1 (ENSCGRG00001005550) #34	Ism2 (ENSCGRG00001024528) #35	SPTLC2 (ENSCGRG00001012086) #36	Alkbh1 (ENSCGRG00001009815) #37
Cricetidae_B	ANCESTRAL SPECIES	18	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Prairie vole	MODERN SPECIES		Tmed10 (ENSMOCG00000022712)	Fos (ENSMOCG00000000968) #7	Jdp2 (ENSMOCG00000002176) #8	Batf (ENSMOCG00000014949) #10	Flvcr2 (ENSMOCG00000002645) #11	Erg28 (ENSMOCG00000013099) #12	ENSMOCG00000018205	ENSMOCG00000000281 #13	ENSMOCG00000003198	Tgfb3 (ENSMOCG00000003916) #15	Ift43 (ENSMOCG00000010189) #16	Gpatch2l (ENSMOCG00000016818) #17	Esrrb (ENSMOCG00000022915) #18	Vash1 (ENSMOCG00000022419) #19	Angel1 (ENSMOCG00000022911) #20	Lrrc74a (ENSMOCG00000004739) #22	Irf2bpl (ENSMOCG00000007745) #23	Cipc (ENSMOCG00000017623) #24	Zdhhc22 (ENSMOCG00000021489) #25	Tmem63c (ENSMOCG00000014740) #26	Ngb (ENSMOCG00000006198) #27	Pomt2 (ENSMOCG00000017272) #28	Gstz1 (ENSMOCG00000021019) #29	Tmed8 (ENSMOCG00000021644) #30	ENSMOCG00000007904 #31	Noxred1 (ENSMOCG00000000558) #32	Vipas39 (ENSMOCG00000007236) #33	Ahsa1 (ENSMOCG00000006835) #34	Ism2 (ENSMOCG00000019207) #35	Sptlc2 (ENSMOCG00000021400) #36	Alkbh1 (ENSMOCG00000005374) #37
Northern American deer mouse	MODERN SPECIES	5	Zc2hc1c (ENSPEMG00000000113)	Nek9 (ENSPEMG00000016848)	ENSPEMG00000001102	Fos (ENSPEMG00000025669) #7	Jdp2 (ENSPEMG00000027096) #8	Batf (ENSPEMG00000026240) #10	Flvcr2 (ENSPEMG00000021330) #11	Erg28 (ENSPEMG00000022195) #12	Ttll5 (ENSPEMG00000011267)	Tgfb3 (ENSPEMG00000023520) #15	Ift43 (ENSPEMG00000021440) #16	Gpatch2l (ENSPEMG00000021766) #17	Esrrb (ENSPEMG00000000679) #18	Vash1 (ENSPEMG00000031357) #19	Angel1 (ENSPEMG00000021771) #20	Lrrc74a (ENSPEMG00000023400) #22	Irf2bpl (ENSPEMG00000008312) #23	Cipc (ENSPEMG00000025030) #24	Zdhhc22 (ENSPEMG00000030237) #25	Tmem63c (ENSPEMG00000017448) #26	Ngb (ENSPEMG00000021719) #27	Pomt2 (ENSPEMG00000023967) #28	Gstz1 (ENSPEMG00000022133) #29	Tmed8 (ENSPEMG00000023333) #30	ENSPEMG00000029497 #31	Noxred1 (ENSPEMG00000024041) #32	Vipas39 (ENSPEMG00000021533) #33	Ahsa1 (ENSPEMG00000024172) #34	Ism2 (ENSPEMG00000016990) #35	Sptlc2 (ENSPEMG00000021760) #36	Alkbh1 (ENSPEMG00000022798) #37
Murinae	ANCESTRAL SPECIES	8	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Mus	ANCESTRAL SPECIES	10	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Mus_A	ANCESTRAL SPECIES	17	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Mus_B	ANCESTRAL SPECIES	17	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Mus_C	ANCESTRAL SPECIES	11	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Steppe mouse	MODERN SPECIES	3177	Nek9 (ENSMSIG00000010828)	Tmed10 (ENSMSIG00000010903)	Fos (ENSMSIG00000010924) #7	ENSMSIG00000010944 #8	Batf (ENSMSIG00000011008) #10	Flvcr2 (ENSMSIG00000011041) #11	Erg28 (ENSMSIG00000011076) #12	Ttll5 (ENSMSIG00000011107)	Tgfb3 (ENSMSIG00000011612) #15	Ift43 (ENSMSIG00000011649) #16	Gpatch2l (ENSMSIG00000011707) #17	Esrrb (ENSMSIG00000011748) #18	ENSMSIG00000011841	Vash1 (ENSMSIG00000011860) #19	Angel1 (ENSMSIG00000011878) #20	Lrrc74a (ENSMSIG00000011897) #22	Irf2bpl (ENSMSIG00000011957) #23	Cipc (ENSMSIG00000011962) #24	Zdhhc22 (ENSMSIG00000011990) #25	Tmem63c (ENSMSIG00000012008) #26	Ngb (ENSMSIG00000012105) #27	Pomt2 (ENSMSIG00000012185) #28	ENSMSIG00000012294	Gstz1 (ENSMSIG00000012312) #29	Tmed8 (ENSMSIG00000012346) #30	ENSMSIG00000012376	Noxred1 (ENSMSIG00000012398) #32	Vipas39 (ENSMSIG00000012420) #33	Ahsa1 (ENSMSIG00000012575) #34	Ism2 (ENSMSIG00000012614) #35	Sptlc2 (ENSMSIG00000012628) #36
spretus	MODERN SPECIES	3	Nek9 (MGP_SPRETEiJ_G0018810)	MGP_SPRETEiJ_G0018811	MGP_SPRETEiJ_G0018812	Fos (MGP_SPRETEiJ_G0018813) #7	Jdp2 (MGP_SPRETEiJ_G0018814) #8	Batf (MGP_SPRETEiJ_G0018815) #10	Flvcr2 (MGP_SPRETEiJ_G0018816) #11	Erg28 (MGP_SPRETEiJ_G0018817) #12	Ttll5 (MGP_SPRETEiJ_G0018818)	Tgfb3 (MGP_SPRETEiJ_G0018819) #15	Ift43 (MGP_SPRETEiJ_G0018820) #16	Gpatch2l (MGP_SPRETEiJ_G0018821) #17	Esrrb (MGP_SPRETEiJ_G0018822) #18	Vash1 (MGP_SPRETEiJ_G0018823) #19	Angel1 (MGP_SPRETEiJ_G0018824) #20	Lrrc74a (MGP_SPRETEiJ_G0018825) #22	Cipc (MGP_SPRETEiJ_G0018826) #24	Zdhhc22 (MGP_SPRETEiJ_G0018827) #25	Tmem63c (MGP_SPRETEiJ_G0018828) #26	Ngb (MGP_SPRETEiJ_G0018829) #27	Pomt2 (MGP_SPRETEiJ_G0018830) #28	Gstz1 (MGP_SPRETEiJ_G0018831) #29	Tmed8 (MGP_SPRETEiJ_G0018832) #30	Samd15 (MGP_SPRETEiJ_G0018833) #31	Noxred1 (MGP_SPRETEiJ_G0018834) #32	Vipas39 (MGP_SPRETEiJ_G0018835) #33	Ahsa1 (MGP_SPRETEiJ_G0018836) #34	Ism2 (MGP_SPRETEiJ_G0018837) #35	Sptlc2 (MGP_SPRETEiJ_G0018838) #36	Alkbh1 (MGP_SPRETEiJ_G0018839) #37	Slirp (MGP_SPRETEiJ_G0018840)
Mouse	MODERN SPECIES	3	Zc2hc1c (ENSMUSG00000045064)	Nek9 (ENSMUSG00000034290)	Tmed10 (ENSMUSG00000021248)	Fos (ENSMUSG00000021250) #7	Jdp2 (ENSMUSG00000034271) #8	Batf (ENSMUSG00000034266) #10	Flvcr2 (ENSMUSG00000034258) #11	Erg28 (ENSMUSG00000021252) #12	Ttll5 (ENSMUSG00000012609)	Tgfb3 (ENSMUSG00000021253) #15	Ift43 (ENSMUSG00000007867) #16	Gpatch2l (ENSMUSG00000021254) #17	Esrrb (ENSMUSG00000021255) #18	Vash1 (ENSMUSG00000021256) #19	Angel1 (ENSMUSG00000021257) #20	Lrrc74a (ENSMUSG00000059114) #22	Irf2bpl (ENSMUSG00000034168) #23	Cipc (ENSMUSG00000034157) #24	Zdhhc22 (ENSMUSG00000048483) #25	Tmem63c (ENSMUSG00000034145) #26	Ngb (ENSMUSG00000021032) #27	Pomt2 (ENSMUSG00000034126) #28	Gstz1 (ENSMUSG00000021033) #29	Tmed8 (ENSMUSG00000034111) #30	Samd15 (ENSMUSG00000090812) #31	Noxred1 (ENSMUSG00000072919) #32	Vipas39 (ENSMUSG00000021038) #33	Ahsa1 (ENSMUSG00000021037) #34	Ism2 (ENSMUSG00000050671) #35	Sptlc2 (ENSMUSG00000021036) #36	Alkbh1 (ENSMUSG00000079036) #37
Ryukyu mouse	MODERN SPECIES	3	Zc2hc1c (MGP_CAROLIEiJ_G0017964)	Nek9 (MGP_CAROLIEiJ_G0017965)	Tmed10 (MGP_CAROLIEiJ_G0017966)	Fos (MGP_CAROLIEiJ_G0017967) #7	Jdp2 (MGP_CAROLIEiJ_G0017968) #8	Batf (MGP_CAROLIEiJ_G0017969) #10	Flvcr2 (MGP_CAROLIEiJ_G0017970) #11	Erg28 (MGP_CAROLIEiJ_G0017971) #12	Ttll5 (MGP_CAROLIEiJ_G0017972)	Tgfb3 (MGP_CAROLIEiJ_G0017973) #15	Ift43 (MGP_CAROLIEiJ_G0017974) #16	Gpatch2l (MGP_CAROLIEiJ_G0017975) #17	Esrrb (MGP_CAROLIEiJ_G0017976) #18	Vash1 (MGP_CAROLIEiJ_G0017977) #19	Angel1 (MGP_CAROLIEiJ_G0017978) #20	Lrrc74a (MGP_CAROLIEiJ_G0017979) #22	Irf2bpl (MGP_CAROLIEiJ_G0017980) #23	Cipc (MGP_CAROLIEiJ_G0017981) #24	Zdhhc22 (MGP_CAROLIEiJ_G0017982) #25	Tmem63c (MGP_CAROLIEiJ_G0017983) #26	Ngb (MGP_CAROLIEiJ_G0017984) #27	Pomt2 (MGP_CAROLIEiJ_G0017985) #28	Gstz1 (MGP_CAROLIEiJ_G0017986) #29	Tmed8 (MGP_CAROLIEiJ_G0017987) #30	Samd15 (MGP_CAROLIEiJ_G0017988) #31	Noxred1 (MGP_CAROLIEiJ_G0017989) #32	Vipas39 (MGP_CAROLIEiJ_G0017990) #33	Ahsa1 (MGP_CAROLIEiJ_G0017991) #34	Ism2 (MGP_CAROLIEiJ_G0017992) #35	Sptlc2 (MGP_CAROLIEiJ_G0017993) #36	Slirp (MGP_CAROLIEiJ_G0017995)
Shrew mouse	MODERN SPECIES	20	Zc2hc1c (MGP_PahariEiJ_G0029723)	Nek9 (MGP_PahariEiJ_G0029724)	Tmed10 (MGP_PahariEiJ_G0029725)	Fos (MGP_PahariEiJ_G0029726) #7	Jdp2 (MGP_PahariEiJ_G0029727) #8	Batf (MGP_PahariEiJ_G0029728) #10	Flvcr2 (MGP_PahariEiJ_G0029729) #11	Erg28 (MGP_PahariEiJ_G0029730) #12	Ttll5 (MGP_PahariEiJ_G0029731)	Tgfb3 (MGP_PahariEiJ_G0029732) #15	Ift43 (MGP_PahariEiJ_G0029733) #16	Gpatch2l (MGP_PahariEiJ_G0029734) #17	Esrrb (MGP_PahariEiJ_G0029735) #18	Vash1 (MGP_PahariEiJ_G0029736) #19	Angel1 (MGP_PahariEiJ_G0029737) #20	Lrrc74a (MGP_PahariEiJ_G0029738) #22	MGP_PahariEiJ_G0001978	Irf2bpl (MGP_PahariEiJ_G0029739) #23	Cipc (MGP_PahariEiJ_G0029740) #24	Zdhhc22 (MGP_PahariEiJ_G0029741) #25	Tmem63c (MGP_PahariEiJ_G0029742) #26	Ngb (MGP_PahariEiJ_G0029743) #27	Pomt2 (MGP_PahariEiJ_G0029744) #28	Gstz1 (MGP_PahariEiJ_G0029745) #29	Tmed8 (MGP_PahariEiJ_G0029746) #30	Samd15 (MGP_PahariEiJ_G0029747) #31	Noxred1 (MGP_PahariEiJ_G0029748) #32	Vipas39 (MGP_PahariEiJ_G0029749) #33	Ahsa1 (MGP_PahariEiJ_G0029750) #34	Ism2 (MGP_PahariEiJ_G0029751) #35	Sptlc2 (MGP_PahariEiJ_G0029752) #36
Rat	MODERN SPECIES	16	Zc2hc1c (ENSRNOG00000027115)	Nek9 (ENSRNOG00000058572)	Tmed10 (ENSRNOG00000007901)	Fos (ENSRNOG00000008015) #7	Jdp2 (ENSRNOG00000063964) #8	Batf (ENSRNOG00000008588) #10	Flvcr2 (ENSRNOG00000008754) #11	Erg28 (ENSRNOG00000008781) #12	Ttll5 (ENSRNOG00000009318)	Tgfb3 (ENSRNOG00000009867) #15	Ift43 (ENSRNOG00000010194) #16	Gpatch2l (ENSRNOG00000010227) #17	Esrrb (ENSRNOG00000010259) #18	Vash1 (ENSRNOG00000010457) #19	Angel1 (ENSRNOG00000010567) #20	Lrrc74a (ENSRNOG00000052456) #22	Irf2bpl (ENSRNOG00000011026) #23	Cipc (ENSRNOG00000011111) #24	Zdhhc22 (ENSRNOG00000011285) #25	Tmem63c (ENSRNOG00000011334) #26	Ngb (ENSRNOG00000011719) #27	Pomt2 (ENSRNOG00000012146) #28	Gstz1 (ENSRNOG00000047708) #29	Tmed8 (ENSRNOG00000064799) #30	Samd15 (ENSRNOG00000050413) #31	Noxred1 (ENSRNOG00000047312) #32	Vipas39 (ENSRNOG00000049223) #33	Ahsa1 (ENSRNOG00000048981) #34	Ism2 (ENSRNOG00000050312) #35	Sptlc2 (ENSRNOG00000012210) #36	Alkbh1 (ENSRNOG00000012264) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	443								ENSNGAG00000014599 #13	Tgfb3 (ENSNGAG00000022768) #15	Ift43 (ENSNGAG00000015338) #16	Gpatch2l (ENSNGAG00000011673) #17	ENSNGAG00000007211	Esrrb (ENSNGAG00000013715) #18	Vash1 (ENSNGAG00000008897) #19	Angel1 (ENSNGAG00000017628) #20	Lrrc74a (ENSNGAG00000020875) #22	Irf2bpl (ENSNGAG00000015769) #23	Cipc (ENSNGAG00000017028) #24	Zdhhc22 (ENSNGAG00000014398) #25	Tmem63c (ENSNGAG00000007732) #26	Ngb (ENSNGAG00000019610) #27	Pomt2 (ENSNGAG00000015382) #28	Gstz1 (ENSNGAG00000013485) #29	Tmed8 (ENSNGAG00000013231) #30	ENSNGAG00000018335 #31	Noxred1 (ENSNGAG00000006846) #32	Vipas39 (ENSNGAG00000020029) #33	Ahsa1 (ENSNGAG00000015235) #34	Ism2 (ENSNGAG00000017737) #35	Sptlc2 (ENSNGAG00000000959) #36	Alkbh1 (ENSNGAG00000006997) #37
Lesser Egyptian jerboa	MODERN SPECIES	41	ENSJJAG00000016452	ENSJJAG00000011402	Fos (ENSJJAG00000007870) #7	Jdp2 (ENSJJAG00000010927) #8	Batf (ENSJJAG00000008958) #10	Flvcr2 (ENSJJAG00000012474) #11	Erg28 (ENSJJAG00000016443) #12	ENSJJAG00000012936	ENSJJAG00000001667 #13	Tgfb3 (ENSJJAG00000023218) #15	Ift43 (ENSJJAG00000023944) #16	Gpatch2l (ENSJJAG00000002357) #17	Esrrb (ENSJJAG00000007076) #18	Vash1 (ENSJJAG00000005593) #19	Angel1 (ENSJJAG00000024403) #20	Lrrc74a (ENSJJAG00000019570) #22	Cipc (ENSJJAG00000024027) #24	Zdhhc22 (ENSJJAG00000023748) #25	Tmem63c (ENSJJAG00000016671) #26	Pomt2 (ENSJJAG00000011918) #28	ENSJJAG00000008868 #29	Tmed8 (ENSJJAG00000015139) #30	Noxred1 (ENSJJAG00000004176) #32	Vipas39 (ENSJJAG00000017309) #33	Ahsa1 (ENSJJAG00000020187) #34	ENSJJAG00000016467	Sptlc2 (ENSJJAG00000013288) #36	Alkbh1 (ENSJJAG00000019755) #37	ENSJJAG00000018723	Snw1 (ENSJJAG00000022060)	Adck1 (ENSJJAG00000016478)
Lagomorpha	ANCESTRAL SPECIES	25	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00990000207089	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000155786 #36	ENSGT00390000004599 #37	ENSGT00940000164270	ENSGT00390000010423
Rabbit	MODERN SPECIES	12	ZC2HC1C (ENSOCUG00000010195)	NEK9 (ENSOCUG00000010201)	TMED10 (ENSOCUG00000004669)	FOS (ENSOCUG00000021506) #7	JDP2 (ENSOCUG00000008466) #8	BATF (ENSOCUG00000026625) #10	ERG28 (ENSOCUG00000016338) #12	FLVCR2 (ENSOCUG00000029538) #11	TTLL5 (ENSOCUG00000011399) #13	TGFB3 (ENSOCUG00000011415) #15	IFT43 (ENSOCUG00000011421) #16	GPATCH2L (ENSOCUG00000004135) #17	ESRRB (ENSOCUG00000001207) #18	VASH1 (ENSOCUG00000009526) #19	ANGEL1 (ENSOCUG00000009531) #20	LRRC74A (ENSOCUG00000017758) #22	IRF2BPL (ENSOCUG00000026623) #23	CIPC (ENSOCUG00000005287) #24	ZDHHC22 (ENSOCUG00000005297) #25	TMEM63C (ENSOCUG00000005760) #26	GLNH (ENSOCUG00000005776) #28	GSTZ1 (ENSOCUG00000026130) #29	ENSOCUG00000021489	TMED8 (ENSOCUG00000002144) #30	ENSOCUG00000024861 #31	VIPAS39 (ENSOCUG00000001425) #33	ENSOCUG00000001430 #34	SPTLC2 (ENSOCUG00000001434) #36	ALKBH1 (ENSOCUG00000001438) #37	ENSOCUG00000009713	SNW1 (ENSOCUG00000009717)
Pika	MODERN SPECIES	5274														ESRRB (ENSOPRG00000013780) #18	ANGEL1 (ENSOPRG00000013802) #20	ENSOPRG00000013824 #22	CIPC (ENSOPRG00000013851) #24	ENSOPRG00000013861 #25	TMEM63C (ENSOPRG00000013885) #26	POMT2 (ENSOPRG00000013909) #28	GSTZ1 (ENSOPRG00000013943) #29	TMED8 (ENSOPRG00000013965) #30	ENSOPRG00000013988 #31	NOXRED1 (ENSOPRG00000014022) #32	VIPAS39 (ENSOPRG00000014035) #33	AHSA1 (ENSOPRG00000014069) #34
Laurasiatheria	ANCESTRAL SPECIES	3	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00990000207089	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154297.A #22
Common shrew	MODERN SPECIES	579																ENSSARG00000008554 #22
Laurasiatheria_a	ANCESTRAL SPECIES	2	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00990000207089	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Laurasiatheria_b	ANCESTRAL SPECIES	3	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Carnivora	ANCESTRAL SPECIES		ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00940000164238.a
Felidae	ANCESTRAL SPECIES	1	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000163359	ENSGT00940000155786 #36
Cat	MODERN SPECIES	237	ZC2HC1C (ENSFCAG00000006375)	NEK9 (ENSFCAG00000025501)	TMED10 (ENSFCAG00000001472)	FOS (ENSFCAG00000025370) #7	JDP2 (ENSFCAG00000029464) #8	BATF (ENSFCAG00000036906) #10	FLVCR2 (ENSFCAG00000014196) #11	ERG28 (ENSFCAG00000014198) #12	TTLL5 (ENSFCAG00000014200) #13	TGFB3 (ENSFCAG00000014204) #15	IFT43 (ENSFCAG00000040391) #16	GPATCH2L (ENSFCAG00000014207) #17	ESRRB (ENSFCAG00000008979) #18	VASH1 (ENSFCAG00000037158) #19	ANGEL1 (ENSFCAG00000011721) #20	LRRC74A (ENSFCAG00000011722) #22	IRF2BPL (ENSFCAG00000043515) #23	CIPC (ENSFCAG00000033587) #24	ZDHHC22 (ENSFCAG00000038387) #25	TMEM63C (ENSFCAG00000011726) #26	POMT2 (ENSFCAG00000011727) #28	GSTZ1 (ENSFCAG00000011729) #29	TMED8 (ENSFCAG00000011732) #30	ENSFCAG00000042664 #31	ENSFCAG00000048544 #31	NOXRED1 (ENSFCAG00000039154) #32	VIPAS39 (ENSFCAG00000001631) #33	AHSA1 (ENSFCAG00000001632) #34	ISM2 (ENSFCAG00000001633) #35	SPTLC2 (ENSFCAG00000001634) #36	ALKBH1 (ENSFCAG00000037897) #37
Panthera	ANCESTRAL SPECIES	3	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000170390	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Tiger	MODERN SPECIES	490	ZC2HC1C (ENSPTIG00000015672)	NEK9 (ENSPTIG00000015640)	TMED10 (ENSPTIG00000015563)	FOS (ENSPTIG00000015550) #7	JDP2 (ENSPTIG00000015529) #8	BATF (ENSPTIG00000015520) #10	ERG28 (ENSPTIG00000015488) #12	FLVCR2 (ENSPTIG00000015461) #11	TTLL5 (ENSPTIG00000015299) #13	TGFB3 (ENSPTIG00000015253) #15	IFT43 (ENSPTIG00000015242) #16	GPATCH2L (ENSPTIG00000015218) #17	ESRRB (ENSPTIG00000015059) #18	VASH1 (ENSPTIG00000015013) #19	ANGEL1 (ENSPTIG00000014991) #20	LRRC74A (ENSPTIG00000014975) #22	ENSPTIG00000014963	ZDHHC22 (ENSPTIG00000014955) #25	TMEM63C (ENSPTIG00000014890) #26	NGB (ENSPTIG00000014879) #27	POMT2 (ENSPTIG00000014855) #28	GSTZ1 (ENSPTIG00000014711) #29	TMED8 (ENSPTIG00000014660) #30	ENSPTIG00000014655 #31	NOXRED1 (ENSPTIG00000014645) #32	VIPAS39 (ENSPTIG00000014412) #33	AHSA1 (ENSPTIG00000014368) #34	ISM2 (ENSPTIG00000014308) #35	SPTLC2 (ENSPTIG00000014265) #36	ENSPTIG00000014244	ALKBH1 (ENSPTIG00000014206) #37
Panthera_a	ANCESTRAL SPECIES	7	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00940000164238.a
leopard	MODERN SPECIES	109	ZC2HC1C (ENSPPRG00000024260)	NEK9 (ENSPPRG00000022516)	TMED10 (ENSPPRG00000019952)	FOS (ENSPPRG00000019513) #7	JDP2 (ENSPPRG00000018181) #8	BATF (ENSPPRG00000016427) #10	FLVCR2 (ENSPPRG00000015729) #11	ERG28 (ENSPPRG00000012901) #12	TTLL5 (ENSPPRG00000012572) #13	TGFB3 (ENSPPRG00000008430) #15	IFT43 (ENSPPRG00000007836) #16	GPATCH2L (ENSPPRG00000007105) #17	ESRRB (ENSPPRG00000005841) #18	VASH1 (ENSPPRG00000005731) #19	ANGEL1 (ENSPPRG00000005702) #20	LRRC74A (ENSPPRG00000005018) #22	ENSPPRG00000004442	IRF2BPL (ENSPPRG00000018030) #23	CIPC (ENSPPRG00000014983) #24	ZDHHC22 (ENSPPRG00000013861) #25	TMEM63C (ENSPPRG00000013041) #26	NGB (ENSPPRG00000011421) #27	POMT2 (ENSPPRG00000011077) #28	GSTZ1 (ENSPPRG00000010680) #29	TMED8 (ENSPPRG00000007114) #30	ENSPPRG00000006360 #31	NOXRED1 (ENSPPRG00000005204) #32	VIPAS39 (ENSPPRG00000004681) #33	AHSA1 (ENSPPRG00000023964) #34	SPTLC2 (ENSPPRG00000022091) #36	ENSPPRG00000015262
lion	MODERN SPECIES	6	ZC2HC1C (ENSPLOG00000002009)	NEK9 (ENSPLOG00000002048)	TMED10 (ENSPLOG00000002116)	FOS (ENSPLOG00000002140) #7	JDP2 (ENSPLOG00000002179) #8	BATF (ENSPLOG00000002194) #10	FLVCR2 (ENSPLOG00000002234) #11	ERG28 (ENSPLOG00000002289) #12	TTLL5 (ENSPLOG00000002332) #13	TGFB3 (ENSPLOG00000002406) #15	IFT43 (ENSPLOG00000002436) #16	GPATCH2L (ENSPLOG00000002465) #17	ESRRB (ENSPLOG00000002494) #18	VASH1 (ENSPLOG00000002532) #19	ANGEL1 (ENSPLOG00000002570) #20	ENSPLOG00000002585 #22	ENSPLOG00000002594	ENSPLOG00000002612	IRF2BPL (ENSPLOG00000002623) #23	CIPC (ENSPLOG00000002704) #24	ZDHHC22 (ENSPLOG00000002716) #25	TMEM63C (ENSPLOG00000002736) #26	NGB (ENSPLOG00000002752) #27	POMT2 (ENSPLOG00000002785) #28	GSTZ1 (ENSPLOG00000002880) #29	TMED8 (ENSPLOG00000002959) #30	ENSPLOG00000002986 #31	NOXRED1 (ENSPLOG00000003000) #32	VIPAS39 (ENSPLOG00000003048) #33	AHSA1 (ENSPLOG00000003212) #34	ENSPLOG00000003240
Caniformia	ANCESTRAL SPECIES	15	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00940000164238.a
Canidae	ANCESTRAL SPECIES	4	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00910000146860.b	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Red fox	MODERN SPECIES	21	KCNA10 (ENSVVUG00000002985)	KCNA2 (ENSVVUG00000002990)	KCNA3 (ENSVVUG00000002996)	ENSVVUG00000003008	ENSVVUG00000003016	ENSVVUG00000003028	CD53 (ENSVVUG00000003032)	ENSVVUG00000003042	LRIF1 (ENSVVUG00000003052)	GPATCH2L (ENSVVUG00000003062) #17	ESRRB (ENSVVUG00000003087) #18	ENSVVUG00000003136	ENSVVUG00000003144	VASH1 (ENSVVUG00000003148) #19	ANGEL1 (ENSVVUG00000003153) #20	LRRC74A (ENSVVUG00000003174) #22	IRF2BPL (ENSVVUG00000003200) #23	CIPC (ENSVVUG00000003217) #24	ZDHHC22 (ENSVVUG00000003222) #25	TMEM63C (ENSVVUG00000003235) #26	NGB (ENSVVUG00000003284) #27	POMT2 (ENSVVUG00000003287) #28	GSTZ1 (ENSVVUG00000003295) #29	TMED8 (ENSVVUG00000003310) #30	SAMD15 (ENSVVUG00000003330) #31	NOXRED1 (ENSVVUG00000003336) #32	VIPAS39 (ENSVVUG00000003384) #33	AHSA1 (ENSVVUG00000004410) #34	ENSVVUG00000004415	SPTLC2 (ENSVVUG00000004423) #36	ALKBH1 (ENSVVUG00000004431) #37
Canis_lupus	ANCESTRAL SPECIES	8	ENSGT00940000163712	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00910000146860.b	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Dog	MODERN SPECIES	36	ENSCAFG00845015259	FOS (ENSCAFG00845015304) #7	JDP2 (ENSCAFG00845015414) #8	BATF (ENSCAFG00845015458) #10	FLVCR2 (ENSCAFG00845015506) #11	ENSCAFG00845015573 #12	TTLL5 (ENSCAFG00845015662) #13	TGFB3 (ENSCAFG00845015760) #15	IFT43 (ENSCAFG00845015850) #16	GPATCH2L (ENSCAFG00845015980) #17	ESRRB (ENSCAFG00845005665) #18	ENSCAFG00845005734	VASH1 (ENSCAFG00845005802) #19	ANGEL1 (ENSCAFG00845005896) #20	ENSCAFG00845005940	LRRC74A (ENSCAFG00845005985) #22	ENSCAFG00845006086	CIPC (ENSCAFG00845006185) #24	ZDHHC22 (ENSCAFG00845006239) #25	TMEM63C (ENSCAFG00845006339) #26	NGB (ENSCAFG00845006478) #27	POMT2 (ENSCAFG00845006560) #28	GSTZ1 (ENSCAFG00845006791) #29	TMED8 (ENSCAFG00845006925) #30	ENSCAFG00845006962 #31	NOXRED1 (ENSCAFG00845007012) #32	VIPAS39 (ENSCAFG00845007177) #33	AHSA1 (ENSCAFG00845007374) #34	ISM2 (ENSCAFG00845007439) #35	SPTLC2 (ENSCAFG00845007510) #36	ENSCAFG00845007598
Dingo	MODERN SPECIES	161	JDP2 (ENSCAFG00020002072) #8	BATF (ENSCAFG00020002062) #10	ENSCAFG00020002058	FLVCR2 (ENSCAFG00020002054) #11	ERG28 (ENSCAFG00020002048) #12	ENSCAFG00020001901	ENSCAFG00020001805 #13	TGFB3 (ENSCAFG00020001790) #15	IFT43 (ENSCAFG00020001777) #16	GPATCH2L (ENSCAFG00020001760) #17	ESRRB (ENSCAFG00020001683) #18	ENSCAFG00020001659	ENSCAFG00020001657	VASH1 (ENSCAFG00020001645) #19	ANGEL1 (ENSCAFG00020001638) #20	ENSCAFG00020001621 #22	IRF2BPL (ENSCAFG00020001610) #23	CIPC (ENSCAFG00020001596) #24	ZDHHC22 (ENSCAFG00020001592) #25	TMEM63C (ENSCAFG00020001392) #26	NGB (ENSCAFG00020001381) #27	POMT2 (ENSCAFG00020001373) #28	GSTZ1 (ENSCAFG00020001369) #29	TMED8 (ENSCAFG00020001320) #30	ENSCAFG00020001308 #31	ENSCAFG00020001305	NOXRED1 (ENSCAFG00020001285) #32	VIPAS39 (ENSCAFG00020000942) #33	AHSA1 (ENSCAFG00020000898) #34	ENSCAFG00020000892	SPTLC2 (ENSCAFG00020000864) #36
Caniformia_b	ANCESTRAL SPECIES	14	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00940000164238.a
Mustelinae	ANCESTRAL SPECIES	14	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
American mink	MODERN SPECIES		NEK9 (ENSNVIG00000015397)	TMED10 (ENSNVIG00000015385)	FOS (ENSNVIG00000015338) #7	JDP2 (ENSNVIG00000015295) #8	BATF (ENSNVIG00000015275) #10	ENSNVIG00000015265 #11	ERG28 (ENSNVIG00000015241) #12	ENSNVIG00000015195 #11	TTLL5 (ENSNVIG00000014956) #13	TGFB3 (ENSNVIG00000014920) #15	IFT43 (ENSNVIG00000014884) #16	GPATCH2L (ENSNVIG00000014775) #17	ESRRB (ENSNVIG00000014751) #18	VASH1 (ENSNVIG00000014689) #19	ANGEL1 (ENSNVIG00000014660) #20	LRRC74A (ENSNVIG00000014620) #22	IRF2BPL (ENSNVIG00000014603) #23	CIPC (ENSNVIG00000014593) #24	ENSNVIG00000014578 #26	NGB (ENSNVIG00000014536) #27	POMT2 (ENSNVIG00000014507) #28	GSTZ1 (ENSNVIG00000014391) #29	TMED8 (ENSNVIG00000014376) #30	ENSNVIG00000014369 #31	ENSNVIG00000014359 #31	VIPAS39 (ENSNVIG00000014130) #33	AHSA1 (ENSNVIG00000014093) #34	ENSNVIG00000014084	SPTLC2 (ENSNVIG00000014052) #36	ALKBH1 (ENSNVIG00000014035) #37	ENSNVIG00000014016
Ferret	MODERN SPECIES	164	ZC2HC1C (ENSMPUG00000009227)	NEK9 (ENSMPUG00000009195)	TMED10 (ENSMPUG00000009159)	FOS (ENSMPUG00000009153) #7	JDP2 (ENSMPUG00000009147) #8	BATF (ENSMPUG00000009143) #10	FLVCR2 (ENSMPUG00000009132) #11	ERG28 (ENSMPUG00000009099) #12	TTLL5 (ENSMPUG00000009065) #13	TGFB3 (ENSMPUG00000009060) #15	IFT43 (ENSMPUG00000009048) #16	GPATCH2L (ENSMPUG00000009034) #17	ESRRB (ENSMPUG00000009025) #18	VASH1 (ENSMPUG00000009019) #19	ANGEL1 (ENSMPUG00000009009) #20	LRRC74A (ENSMPUG00000008964) #22	ENSMPUG00000008957	IRF2BPL (ENSMPUG00000008947) #23	CIPC (ENSMPUG00000008939) #24	ZDHHC22 (ENSMPUG00000008932) #25	TMEM63C (ENSMPUG00000008904) #26	NGB (ENSMPUG00000008867) #27	POMT2 (ENSMPUG00000008852) #28	GSTZ1 (ENSMPUG00000008848) #29	TMED8 (ENSMPUG00000008839) #30	ENSMPUG00000008836 #31	NOXRED1 (ENSMPUG00000008819) #32	VIPAS39 (ENSMPUG00000008806) #33	AHSA1 (ENSMPUG00000008797) #34	ENSMPUG00000008785	SPTLC2 (ENSMPUG00000008772) #36
Ursidae	ANCESTRAL SPECIES	10	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954.y	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00940000168157.b	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000155786 #36	ENSGT00940000164238.a
Ursus	ANCESTRAL SPECIES	11	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954.y	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00940000168157.b	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000155786 #36	ENSGT00390000004599 #37
American black bear	MODERN SPECIES	153														VASH1 (ENSUAMG00000011802) #19	ANGEL1 (ENSUAMG00000011796) #20	ENSUAMG00000011786 #22	IRF2BPL (ENSUAMG00000011783) #23	CIPC (ENSUAMG00000011779) #24	ZDHHC22 (ENSUAMG00000011776) #25	TMEM63C (ENSUAMG00000011768) #26	NGB (ENSUAMG00000011763) #27	POMT2 (ENSUAMG00000011754) #28	GSTZ1 (ENSUAMG00000011676) #29	TMED8 (ENSUAMG00000011649) #30	ENSUAMG00000011644	ENSUAMG00000011641 #31	NOXRED1 (ENSUAMG00000011638) #32	AHSA1 (ENSUAMG00000011634) #34	VIPAS39 (ENSUAMG00000011623) #33
Polar bear	MODERN SPECIES	100	ZC2HC1C (ENSUMAG00000008115)	NEK9 (ENSUMAG00000007797)	TMED10 (ENSUMAG00000007763)	FOS (ENSUMAG00000007758) #7	JDP2 (ENSUMAG00000007737) #8	BATF (ENSUMAG00000007730) #10	FLVCR2 (ENSUMAG00000007713) #11	ERG28 (ENSUMAG00000007701) #12	TTLL5 (ENSUMAG00000007586) #13	TGFB3 (ENSUMAG00000007544) #15	IFT43 (ENSUMAG00000007535) #16	GPATCH2L (ENSUMAG00000007530) #17	ESRRB (ENSUMAG00000007511) #18	VASH1 (ENSUMAG00000007499) #19	ANGEL1 (ENSUMAG00000007496) #20	ENSUMAG00000007494 #22	CIPC (ENSUMAG00000007485) #24	ZDHHC22 (ENSUMAG00000007483) #25	ENSUMAG00000007475 #26	NGB (ENSUMAG00000007470) #27	POMT2 (ENSUMAG00000007338) #28	GSTZ1 (ENSUMAG00000007313) #29	TMED8 (ENSUMAG00000007288) #30	ENSUMAG00000007282	ENSUMAG00000007280 #31	NOXRED1 (ENSUMAG00000007278) #32	VIPAS39 (ENSUMAG00000007272) #33	AHSA1 (ENSUMAG00000007237) #34	SPTLC2 (ENSUMAG00000007203) #36	ALKBH1 (ENSUMAG00000007173) #37	SLIRP (ENSUMAG00000007166)
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	5	ZC2HC1C (ENSAMEG00000018327)	NEK9 (ENSAMEG00000018328)	TMED10 (ENSAMEG00000018333)	FOS (ENSAMEG00000027409) #7	JDP2 (ENSAMEG00000018337) #8	BATF (ENSAMEG00000025412) #10	FLVCR2 (ENSAMEG00000018339) #11	ERG28 (ENSAMEG00000018343) #12	TTLL5 (ENSAMEG00000018345) #13	TGFB3 (ENSAMEG00000018349) #15	IFT43 (ENSAMEG00000018353) #16	GPATCH2L (ENSAMEG00000018354) #17	ESRRB (ENSAMEG00000018355) #18	VASH1 (ENSAMEG00000026174) #19	ANGEL1 (ENSAMEG00000018359) #20	ENSAMEG00000027034 #22	IRF2BPL (ENSAMEG00000025474) #23	CIPC (ENSAMEG00000018364) #24	ZDHHC22 (ENSAMEG00000018365) #25	TMEM63C (ENSAMEG00000003655) #26	NGB (ENSAMEG00000025960) #27	POMT2 (ENSAMEG00000003754) #28	GSTZ1 (ENSAMEG00000003792) #29	TMED8 (ENSAMEG00000003828) #30	ENSAMEG00000012207	ENSAMEG00000024891 #31	NOXRED1 (ENSAMEG00000003840) #32	VIPAS39 (ENSAMEG00000003846) #33	AHSA1 (ENSAMEG00000003906) #34	SPTLC2 (ENSAMEG00000003940) #36	ENSAMEG00000030406
Giant Panda	MODERN SPECIES	1969																ENSAMEG00000031143 #22
Laurasiatheria_c	ANCESTRAL SPECIES	1	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000163359	ENSGT00940000155786 #36
Equus	ANCESTRAL SPECIES	17	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f.b.b #11	ENSGT01030000234625.B.d.e.b #11	ENSGT01030000234625.B.d.f.a #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000162809 #35	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Horse	MODERN SPECIES	16	BATF (ENSECAG00000016422) #10	ENSECAG00000055708	ENSECAG00000056517 #11	ENSECAG00000055095 #11	ENSECAG00000051647 #11	ENSECAG00000010201 #11	ENSECAG00000059507 #12	TTLL5 (ENSECAG00000021163) #13	TGFB3 (ENSECAG00000015029) #15	IFT43 (ENSECAG00000036728) #16	GPATCH2L (ENSECAG00000008582) #17	ENSECAG00000046635	ESRRB (ENSECAG00000011167) #18	VASH1 (ENSECAG00000021042) #19	ANGEL1 (ENSECAG00000023551) #20	LRRC74A (ENSECAG00000007514) #22	IRF2BPL (ENSECAG00000009757) #23	CIPC (ENSECAG00000009897) #24	ZDHHC22 (ENSECAG00000010607) #25	TMEM63C (ENSECAG00000031932) #26	NGB (ENSECAG00000032532) #27	POMT2 (ENSECAG00000018660) #28	GSTZ1 (ENSECAG00000011265) #29	TMED8 (ENSECAG00000015957) #30	ENSECAG00000048511	SAMD15 (ENSECAG00000016624) #31	NOXRED1 (ENSECAG00000017196) #32	VIPAS39 (ENSECAG00000019439) #33	AHSA1 (ENSECAG00000011763) #34	ISM2 (ENSECAG00000020395) #35	SPTLC2 (ENSECAG00000021294) #36
Donkey	MODERN SPECIES	27	ENSEASG00005025547 #8	BATF (ENSEASG00005037745) #10	ENSEASG00005019748 #11	ENSEASG00005037343 #11	ENSEASG00005026680 #11	ENSEASG00005028828 #11	ENSEASG00005019747 #11	ERG28 (ENSEASG00005030085) #12	TTLL5 (ENSEASG00005019982) #13	TGFB3 (ENSEASG00005019995) #15	IFT43 (ENSEASG00005020000) #16	GPATCH2L (ENSEASG00005020005) #17	ESRRB (ENSEASG00005020012) #18	VASH1 (ENSEASG00005020017) #19	ANGEL1 (ENSEASG00005020021) #20	LRRC74A (ENSEASG00005034610) #22	IRF2BPL (ENSEASG00005037140) #23	CIPC (ENSEASG00005026606) #24	ZDHHC22 (ENSEASG00005020037) #25	TMEM63C (ENSEASG00005020043) #26	NGB (ENSEASG00005020047) #27	POMT2 (ENSEASG00005020051) #28	GSTZ1 (ENSEASG00005020054) #29	TMED8 (ENSEASG00005020063) #30	SAMD15 (ENSEASG00005020070) #31	NOXRED1 (ENSEASG00005020079) #32	VIPAS39 (ENSEASG00005020082) #33	AHSA1 (ENSEASG00005020093) #34	ISM2 (ENSEASG00005020098) #35	SPTLC2 (ENSEASG00005020143) #36	ALKBH1 (ENSEASG00005023538) #37
Chiroptera	ANCESTRAL SPECIES	15	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Microchiroptera	ANCESTRAL SPECIES	19	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Microbat	MODERN SPECIES	971														VASH1 (ENSMLUG00000008920) #19	ANGEL1 (ENSMLUG00000008935) #20	LRRC74A (ENSMLUG00000003486) #22	IRF2BPL (ENSMLUG00000017538) #23	CIPC (ENSMLUG00000017542) #24	ZDHHC22 (ENSMLUG00000017545) #25	TMEM63C (ENSMLUG00000005108) #26	NGB (ENSMLUG00000005120) #27	POMT2 (ENSMLUG00000005125) #28	GSTZ1 (ENSMLUG00000005141) #29	TMED8 (ENSMLUG00000005149) #30	ENSMLUG00000005153 #31	NOXRED1 (ENSMLUG00000005160) #32	VIPAS39 (ENSMLUG00000005166) #33	AHSA1 (ENSMLUG00000005183) #34	ENSMLUG00000005195	SPTLC2 (ENSMLUG00000005208) #36	ENSMLUG00000001463
Greater horseshoe bat	MODERN SPECIES	24	NEK9 (ENSRFEG00010001168)	TMED10 (ENSRFEG00010001139)	FOS (ENSRFEG00010001112) #7	JDP2 (ENSRFEG00010001081) #8	BATF (ENSRFEG00010001057) #10	ERG28 (ENSRFEG00010001031) #12	FLVCR2 (ENSRFEG00010000978) #11	TTLL5 (ENSRFEG00010000797) #13	TGFB3 (ENSRFEG00010000739) #15	IFT43 (ENSRFEG00010000684) #16	GPATCH2L (ENSRFEG00010000582) #17	ESRRB (ENSRFEG00010000491) #18	VASH1 (ENSRFEG00010000359) #19	ENSRFEG00010000309	ANGEL1 (ENSRFEG00010000272) #20	ENSRFEG00010000228 #22	IRF2BPL (ENSRFEG00010016599) #23	ENSRFEG00010016541	CIPC (ENSRFEG00010016499) #24	ZDHHC22 (ENSRFEG00010016454) #25	TMEM63C (ENSRFEG00010016376) #26	NGB (ENSRFEG00010016303) #27	POMT2 (ENSRFEG00010016239) #28	GSTZ1 (ENSRFEG00010015854) #29	TMED8 (ENSRFEG00010015797) #30	SAMD15 (ENSRFEG00010015755) #31	NOXRED1 (ENSRFEG00010015702) #32	VIPAS39 (ENSRFEG00010015106) #33	AHSA1 (ENSRFEG00010014797) #34	SPTLC2 (ENSRFEG00010014754) #36	ALKBH1 (ENSRFEG00010014690) #37
Megabat	MODERN SPECIES	2399														VASH1 (ENSPVAG00000011761) #19	ANGEL1 (ENSPVAG00000011762) #20	ENSPVAG00000011763 #22
Artiodactyla	ANCESTRAL SPECIES	3	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00990000207089	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Suina	ANCESTRAL SPECIES	24	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Chacoan peccary	MODERN SPECIES	885	ENSCWAG00000021069	NEK9 (ENSCWAG00000021083)	TMED10 (ENSCWAG00000021099)	FOS (ENSCWAG00000021112) #7	JDP2 (ENSCWAG00000021133) #8	BATF (ENSCWAG00000021146) #10	FLVCR2 (ENSCWAG00000021161) #11	ERG28 (ENSCWAG00000021179) #12	TTLL5 (ENSCWAG00000021198) #13	TGFB3 (ENSCWAG00000021233) #15	IFT43 (ENSCWAG00000021243) #16	GPATCH2L (ENSCWAG00000021259) #17	ESRRB (ENSCWAG00000021273) #18	VASH1 (ENSCWAG00000021293) #19	ANGEL1 (ENSCWAG00000021318) #20	LRRC74A (ENSCWAG00000021336) #22	IRF2BPL (ENSCWAG00000021360) #23	CIPC (ENSCWAG00000021362) #24	ZDHHC22 (ENSCWAG00000021370) #25	TMEM63C (ENSCWAG00000021379) #26	NGB (ENSCWAG00000021385) #27	POMT2 (ENSCWAG00000021391) #28	GSTZ1 (ENSCWAG00000021410) #29	TMED8 (ENSCWAG00000021440) #30	ENSCWAG00000021444 #31	NOXRED1 (ENSCWAG00000021450) #32	VIPAS39 (ENSCWAG00000021463) #33	AHSA1 (ENSCWAG00000021485) #34	SPTLC2 (ENSCWAG00000021490) #36	ALKBH1 (ENSCWAG00000021497) #37	ENSCWAG00000021501
Pig	MODERN SPECIES	15	ZC2HC1C (ENSSSCG00000002380)	NEK9 (ENSSSCG00000002381)	TMED10 (ENSSSCG00000035684)	FOS (ENSSSCG00000002383) #7	JDP2 (ENSSSCG00000035895) #8	BATF (ENSSSCG00000055470) #10	FLVCR2 (ENSSSCG00000021606) #11	ERG28 (ENSSSCG00000036494) #12	TTLL5 (ENSSSCG00000025984) #13	TGFB3 (ENSSSCG00000002385) #15	IFT43 (ENSSSCG00000002386) #16	GPATCH2L (ENSSSCG00000002387) #17	ESRRB (ENSSSCG00000002388) #18	VASH1 (ENSSSCG00000002389) #19	ANGEL1 (ENSSSCG00000002390) #20	LRRC74A (ENSSSCG00000002391) #22	IRF2BPL (ENSSSCG00000002392) #23	CIPC (ENSSSCG00000029760) #24	ZDHHC22 (ENSSSCG00000033688) #25	TMEM63C (ENSSSCG00000002398) #26	NGB (ENSSSCG00000002399) #27	POMT2 (ENSSSCG00000002397) #28	GSTZ1 (ENSSSCG00000002396) #29	TMED8 (ENSSSCG00000036028) #30	ENSSSCG00000002400	NOXRED1 (ENSSSCG00000030069) #32	VIPAS39 (ENSSSCG00000002403) #33	AHSA1 (ENSSSCG00000002406) #34	ENSSSCG00000055723	SPTLC2 (ENSSSCG00000002404) #36	ALKBH1 (ENSSSCG00000025906) #37
Artiodactyla_a	ANCESTRAL SPECIES	2	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00990000207089	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Camelidae	ANCESTRAL SPECIES	8	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000162809 #35	ENSGT00940000155786 #36
Arabian camel	MODERN SPECIES	32	ZC2HC1C (ENSCDRG00005001075)	NEK9 (ENSCDRG00005001099)	ENSCDRG00005001147	FOS (ENSCDRG00005001172) #7	JDP2 (ENSCDRG00005001197) #8	BATF (ENSCDRG00005001210) #10	FLVCR2 (ENSCDRG00005001225) #11	ERG28 (ENSCDRG00005001259) #12	TTLL5 (ENSCDRG00005001293) #13	TGFB3 (ENSCDRG00005001558) #15	IFT43 (ENSCDRG00005001576) #16	GPATCH2L (ENSCDRG00005001603) #17	ESRRB (ENSCDRG00005001673) #18	VASH1 (ENSCDRG00005001716) #19	ANGEL1 (ENSCDRG00005001736) #20	LRRC74A (ENSCDRG00005001757) #22	IRF2BPL (ENSCDRG00005001775) #23	CIPC (ENSCDRG00005001783) #24	ZDHHC22 (ENSCDRG00005001794) #25	TMEM63C (ENSCDRG00005001810) #26	NGB (ENSCDRG00005001836) #27	POMT2 (ENSCDRG00005001850) #28	GSTZ1 (ENSCDRG00005001895) #29	TMED8 (ENSCDRG00005001931) #30	ENSCDRG00005001944 #31	NOXRED1 (ENSCDRG00005001955) #32	VIPAS39 (ENSCDRG00005001976) #33	AHSA1 (ENSCDRG00005001991) #34	ENSCDRG00005002010	ENSCDRG00005002017 #35	SPTLC2 (ENSCDRG00005002026) #36
Alpaca	MODERN SPECIES	3406															ANGEL1 (ENSVPAG00000009546) #20	ENSVPAG00000009547 #22
Artiodactyla_b	ANCESTRAL SPECIES	2	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00990000207089	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT01100000263976
Pecora	ANCESTRAL SPECIES	6	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925.c.a #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000155786 #36	ENSGT01100000263976	ENSGT00390000004599 #37
Yarkand deer	MODERN SPECIES	3	FOS (ENSCHYG00000007069) #7	ENSCHYG00000007218	JDP2 (ENSCHYG00000007237) #8	BATF (ENSCHYG00000007278) #10	ENSCHYG00000007326 #11	ENSCHYG00000007628 #11	ENSCHYG00000007651 #12	TTLL5 (ENSCHYG00000007731) #13	ENSCHYG00000008222	TGFB3 (ENSCHYG00000008241) #15	ENSCHYG00000008279 #16	GPATCH2L (ENSCHYG00000008381) #17	ESRRB (ENSCHYG00000008507) #18	VASH1 (ENSCHYG00000008609) #19	ANGEL1 (ENSCHYG00000008773) #20	LRRC74A (ENSCHYG00000008938) #22	IRF2BPL (ENSCHYG00000009093) #23	CIPC (ENSCHYG00000009112) #24	ZDHHC22 (ENSCHYG00000009129) #25	TMEM63C (ENSCHYG00000009168) #26	NGB (ENSCHYG00000009323) #27	POMT2 (ENSCHYG00000009382) #28	ENSCHYG00000009566 #29	TMED8 (ENSCHYG00000009895) #30	ENSCHYG00000009939 #31	NOXRED1 (ENSCHYG00000009984) #32	VIPAS39 (ENSCHYG00000010129) #33	AHSA1 (ENSCHYG00000011350) #34	SPTLC2 (ENSCHYG00000011431) #36	ALKBH1 (ENSCHYG00000011528) #37	ENSCHYG00000011584
Percora_a	ANCESTRAL SPECIES	8	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925.c.a #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000155786 #36	ENSGT01100000263976.a	ENSGT00390000004599 #37
Siberian musk deer	MODERN SPECIES	260	TMED10 (ENSMMSG00000022295)	FOS (ENSMMSG00000022311) #7	JDP2 (ENSMMSG00000022346) #8	BATF (ENSMMSG00000022368) #10	FLVCR2 (ENSMMSG00000022392) #11	ENSMMSG00000022462 #12	ENSMMSG00000022474	ENSMMSG00000004476 #12	TTLL5 (ENSMMSG00000004728) #13	TGFB3 (ENSMMSG00000005515) #15	IFT43 (ENSMMSG00000005555) #16	GPATCH2L (ENSMMSG00000005705) #17	ESRRB (ENSMMSG00000005798) #18	VASH1 (ENSMMSG00000005903) #19	ANGEL1 (ENSMMSG00000006000) #20	LRRC74A (ENSMMSG00000006048) #22	IRF2BPL (ENSMMSG00000006088) #23	CIPC (ENSMMSG00000006097) #24	ZDHHC22 (ENSMMSG00000006108) #25	TMEM63C (ENSMMSG00000006122) #26	NGB (ENSMMSG00000006175) #27	POMT2 (ENSMMSG00000006201) #28	GSTZ1 (ENSMMSG00000006249) #29	TMED8 (ENSMMSG00000006449) #30	ENSMMSG00000006481 #31	NOXRED1 (ENSMMSG00000006507) #32	VIPAS39 (ENSMMSG00000006605) #33	AHSA1 (ENSMMSG00000006996) #34	SPTLC2 (ENSMMSG00000007052) #36	ENSMMSG00000007109	ENSMMSG00000007141 #37
Bovidae	ANCESTRAL SPECIES	7	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f.e.a #11	ENSGT00390000010925.d #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000155786 #36	ENSGT01100000263976.a	ENSGT00390000004599 #37
Caprinae	ANCESTRAL SPECIES	11	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f.e.a #11	ENSGT01030000234625.B.d.f.e.b #11	ENSGT00390000010925.c.a #12	ENSGT00390000010925.c.b.a.a #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000155786 #36	ENSGT00390000004599 #37	ENSGT00390000008624
Rambouillet Sheep	MODERN SPECIES	23	FOS (ENSOARG00020018165) #7	JDP2 (ENSOARG00020018321) #8	BATF (ENSOARG00020018372) #10	ENSOARG00020018404 #12	ENSOARG00020018452 #12	ENSOARG00020018534 #12	ENSOARG00020018627 #11	TTLL5 (ENSOARG00020018787) #13	ENSOARG00020019785	TGFB3 (ENSOARG00020003092) #15	IFT43 (ENSOARG00020003134) #16	GPATCH2L (ENSOARG00020003216) #17	ESRRB (ENSOARG00020003385) #18	VASH1 (ENSOARG00020003527) #19	ANGEL1 (ENSOARG00020003656) #20	LRRC74A (ENSOARG00020003737) #22	IRF2BPL (ENSOARG00020003797) #23	CIPC (ENSOARG00020003811) #24	ZDHHC22 (ENSOARG00020003827) #25	TMEM63C (ENSOARG00020003853) #26	NGB (ENSOARG00020003943) #27	POMT2 (ENSOARG00020003994) #28	GSTZ1 (ENSOARG00020004246) #29	TMED8 (ENSOARG00020004523) #30	ENSOARG00020004550 #31	NOXRED1 (ENSOARG00020004567) #32	VIPAS39 (ENSOARG00020004622) #33	AHSA1 (ENSOARG00020004874) #34	SPTLC2 (ENSOARG00020004916) #36	ALKBH1 (ENSOARG00020004970) #37	SLIRP (ENSOARG00020005039)
Goat	MODERN SPECIES	1	JDP2 (ENSCHIG00000017157) #8	BATF (ENSCHIG00000009266) #10	ENSCHIG00000019256 #11	ENSCHIG00000013593 #12	ENSCHIG00000025043 #12	ENSCHIG00000015140 #11	ENSCHIG00000010970 #12	ENSCHIG00000021498	TTLL5 (ENSCHIG00000020468) #13	TGFB3 (ENSCHIG00000001922) #15	IFT43 (ENSCHIG00000011518) #16	GPATCH2L (ENSCHIG00000023076) #17	ESRRB (ENSCHIG00000022728) #18	VASH1 (ENSCHIG00000015080) #19	ANGEL1 (ENSCHIG00000016482) #20	LRRC74A (ENSCHIG00000007543) #22	IRF2BPL (ENSCHIG00000010927) #23	CIPC (ENSCHIG00000013551) #24	ZDHHC22 (ENSCHIG00000013257) #25	TMEM63C (ENSCHIG00000022815) #26	NGB (ENSCHIG00000018195) #27	POMT2 (ENSCHIG00000021693) #28	GSTZ1 (ENSCHIG00000024297) #29	TMED8 (ENSCHIG00000003437) #30	ENSCHIG00000018169 #31	VIPAS39 (ENSCHIG00000011342) #33	AHSA1 (ENSCHIG00000026112) #34	ENSCHIG00000015592	SPTLC2 (ENSCHIG00000021963) #36	ALKBH1 (ENSCHIG00000017896) #37	ENSCHIG00000019077
Bovinae	ANCESTRAL SPECIES	11	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f.e.a #11	ENSGT00390000010925.d #12	ENSGT01030000234625.B.d.e.a #11	ENSGT00390000010925.c.b.a.a #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000155786 #36	ENSGT01100000263976.a	ENSGT00390000004599 #37
American bison	MODERN SPECIES	3120					ENSBBBG00000021765 #12	ENSBBBG00000021754 #11	ENSBBBG00000021735 #12	TTLL5 (ENSBBBG00000021702) #13	TGFB3 (ENSBBBG00000021465) #15	IFT43 (ENSBBBG00000021452) #16	GPATCH2L (ENSBBBG00000021428) #17	ESRRB (ENSBBBG00000005702) #18	ENSBBBG00000021237	VASH1 (ENSBBBG00000021229) #19	ANGEL1 (ENSBBBG00000021201) #20	LRRC74A (ENSBBBG00000021176) #22	IRF2BPL (ENSBBBG00000021163) #23	CIPC (ENSBBBG00000021153) #24	ZDHHC22 (ENSBBBG00000021146) #25	TMEM63C (ENSBBBG00000021140) #26	NGB (ENSBBBG00000021098) #27	POMT2 (ENSBBBG00000021033) #28	GSTZ1 (ENSBBBG00000020998) #29	TMED8 (ENSBBBG00000020911) #30	ENSBBBG00000020887 #31	NOXRED1 (ENSBBBG00000008399) #32	VIPAS39 (ENSBBBG00000005610) #33	AHSA1 (ENSBBBG00000005579) #34	SPTLC2 (ENSBBBG00000020663) #36	ENSBBBG00000020646	ALKBH1 (ENSBBBG00000020638) #37
Bos	ANCESTRAL SPECIES	13	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f.e.a #11	ENSGT01030000234625.B.d.e.a #11	ENSGT00390000010925.c.b.a.a #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000155786 #36	ENSGT01100000263976.a	ENSGT00390000004599 #37
Bos_a	ANCESTRAL SPECIES	1	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.e.a #11	ENSGT00390000010925.c.b.a.a #12	ENSGT00390000010925.c.a #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000155786 #36	ENSGT00940000154319.v.bb.b	ENSGT00390000004599 #37
Domestic yak	MODERN SPECIES	2	TMED10 (ENSBGRG00000009052)	FOS (ENSBGRG00000009096) #7	JDP2 (ENSBGRG00000009251) #8	ENSBGRG00000009350 #10	ENSBGRG00000009398	ENSBGRG00000009425 #11	ERG28 (ENSBGRG00000009468) #12	TTLL5 (ENSBGRG00000009576) #13	TGFB3 (ENSBGRG00000010079) #15	IFT43 (ENSBGRG00000010136) #16	GPATCH2L (ENSBGRG00000010360) #17	ESRRB (ENSBGRG00000010484) #18	ENSBGRG00000010664	VASH1 (ENSBGRG00000010704) #19	ANGEL1 (ENSBGRG00000011057) #20	LRRC74A (ENSBGRG00000011399) #22	IRF2BPL (ENSBGRG00000011690) #23	CIPC (ENSBGRG00000011724) #24	ZDHHC22 (ENSBGRG00000011791) #25	TMEM63C (ENSBGRG00000011856) #26	NGB (ENSBGRG00000011958) #27	POMT2 (ENSBGRG00000012079) #28	GSTZ1 (ENSBGRG00000012412) #29	TMED8 (ENSBGRG00000012701) #30	ENSBGRG00000012748 #31	NOXRED1 (ENSBGRG00000012797) #32	VIPAS39 (ENSBGRG00000012973) #33	AHSA1 (ENSBGRG00000013505) #34	SPTLC2 (ENSBGRG00000013685) #36	ENSBGRG00000013956	ALKBH1 (ENSBGRG00000014007) #37
Wild yak	MODERN SPECIES	259										TGFB3 (ENSBMUG00000025705) #15	IFT43 (ENSBMUG00000025700) #16	GPATCH2L (ENSBMUG00000025691) #17	ESRRB (ENSBMUG00000025665) #18	VASH1 (ENSBMUG00000025655) #19	ANGEL1 (ENSBMUG00000025638) #20	LRRC74A (ENSBMUG00000025615) #22
Bos_b	ANCESTRAL SPECIES	11	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f.e.a #11	ENSGT01030000234625.B.d.f.e.b #11	ENSGT00940000162939 #13	ENSGT00390000010925.c.a #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000155786 #36	ENSGT01100000263976.a	ENSGT00390000004599 #37
Hybrid Bos Indicus	MODERN SPECIES	1	TMED10 (ENSBIXG00005025171)	FOS (ENSBIXG00005025139) #7	JDP2 (ENSBIXG00005025082) #8	ENSBIXG00005025026	BATF (ENSBIXG00005025002) #10	ENSBIXG00005024965 #11	ENSBIXG00005024804 #11	ENSBIXG00005024769	TTLL5 (ENSBIXG00005024691) #13	TGFB3 (ENSBIXG00005024563) #15	IFT43 (ENSBIXG00005024523) #16	GPATCH2L (ENSBIXG00005024457) #17	ESRRB (ENSBIXG00005006060) #18	VASH1 (ENSBIXG00005024239) #19	ANGEL1 (ENSBIXG00005006173) #20	LRRC74A (ENSBIXG00005024136) #22	IRF2BPL (ENSBIXG00005024076) #23	CIPC (ENSBIXG00005024051) #24	ZDHHC22 (ENSBIXG00005024019) #25	TMEM63C (ENSBIXG00005023999) #26	NGB (ENSBIXG00005023967) #27	POMT2 (ENSBIXG00005007078) #28	ENSBIXG00005023852 #29	TMED8 (ENSBIXG00005023691) #30	ENSBIXG00005004049 #31	NOXRED1 (ENSBIXG00005023636) #32	VIPAS39 (ENSBIXG00005023581) #33	AHSA1 (ENSBIXG00005023316) #34	SPTLC2 (ENSBIXG00005023219) #36	ENSBIXG00005003951	ALKBH1 (ENSBIXG00005023146) #37
Cow	MODERN SPECIES	1	NEK9 (ENSBTAG00000016612)	TMED10 (ENSBTAG00000005694)	FOS (ENSBTAG00000004322) #7	JDP2 (ENSBTAG00000009451) #8	BATF (ENSBTAG00000025405) #10	FLVCR2 (ENSBTAG00000040078) #11	ENSBTAG00000011985 #11	ERG28 (ENSBTAG00000011987) #12	TTLL5 (ENSBTAG00000025403)	TGFB3 (ENSBTAG00000012004) #15	IFT43 (ENSBTAG00000012005) #16	GPATCH2L (ENSBTAG00000003084) #17	ESRRB (ENSBTAG00000012285) #18	VASH1 (ENSBTAG00000008735) #19	ANGEL1 (ENSBTAG00000019454) #20	LRRC74A (ENSBTAG00000013181) #22	IRF2BPL (ENSBTAG00000025329) #23	CIPC (ENSBTAG00000009923) #24	ZDHHC22 (ENSBTAG00000014384) #25	TMEM63C (ENSBTAG00000016283) #26	NGB (ENSBTAG00000016285) #27	POMT2 (ENSBTAG00000002704) #28	GSTZ1 (ENSBTAG00000002706) #29	TMED8 (ENSBTAG00000020469) #30	SAMD15 (ENSBTAG00000020471) #31	NOXRED1 (ENSBTAG00000020474) #32	VIPAS39 (ENSBTAG00000020475) #33	AHSA1 (ENSBTAG00000020477) #34	SPTLC2 (ENSBTAG00000020480) #36	ENSBTAG00000049115	ALKBH1 (ENSBTAG00000008133) #37
Cetacea	ANCESTRAL SPECIES	2	ENSGT00550000074954	ENSGT00940000158980.b	ENSGT00940000159276 #7	ENSGT00990000207089	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144.i #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT01100000263976
Blue whale	MODERN SPECIES	11	TMED10 (ENSBMSG00010007334)	ENSBMSG00010007349	FOS (ENSBMSG00010007361) #7	JDP2 (ENSBMSG00010007385) #8	FLVCR2 (ENSBMSG00010007550) #11	ENSBMSG00010007570	ERG28 (ENSBMSG00010007579) #12	TTLL5 (ENSBMSG00010007632) #13	TGFB3 (ENSBMSG00010007720) #15	IFT43 (ENSBMSG00010007740) #16	GPATCH2L (ENSBMSG00010007772) #17	ENSBMSG00010007793	ESRRB (ENSBMSG00010007810) #18	VASH1 (ENSBMSG00010007842) #19	ANGEL1 (ENSBMSG00010007871) #20	LRRC74A (ENSBMSG00010007906) #22	IRF2BPL (ENSBMSG00010007928) #23	CIPC (ENSBMSG00010007939) #24	ZDHHC22 (ENSBMSG00010007948) #25	TMEM63C (ENSBMSG00010007957) #26	NGB (ENSBMSG00010007974) #27	POMT2 (ENSBMSG00010007985) #28	GSTZ1 (ENSBMSG00010008049) #29	TMED8 (ENSBMSG00010008120) #30	ENSBMSG00010008126 #31	NOXRED1 (ENSBMSG00010008134) #32	VIPAS39 (ENSBMSG00010008163) #33	ENSBMSG00010008227 #34	ISM2 (ENSBMSG00010008244) #35	SPTLC2 (ENSBMSG00010008255) #36	ENSBMSG00010008264
Odontoceti	ANCESTRAL SPECIES	2	ENSGT00550000074954	ENSGT00940000158980.b	ENSGT00940000159276 #7	ENSGT00990000207089	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144.i #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT01100000263976
Sperm whale	MODERN SPECIES	2	EIF2B2 (ENSPCTG00005022702)	ACYP1 (ENSPCTG00005022706)	ZC2HC1C (ENSPCTG00005022709)	TMED10 (ENSPCTG00005022711)	ENSPCTG00005022712 #8	BATF (ENSPCTG00005022713) #10	FLVCR2 (ENSPCTG00005022714) #11	ERG28 (ENSPCTG00005022716) #12	TTLL5 (ENSPCTG00005022718) #13	ENSPCTG00005022725	GPATCH2L (ENSPCTG00005022727) #17	IFT43 (ENSPCTG00005022728) #16	ENSPCTG00005022729	VASH1 (ENSPCTG00005022730) #19	ANGEL1 (ENSPCTG00005022732) #20	LRRC74A (ENSPCTG00005022735) #22	IRF2BPL (ENSPCTG00005022737) #23	CIPC (ENSPCTG00005022738) #24	ZDHHC22 (ENSPCTG00005022739) #25	TMEM63C (ENSPCTG00005022741) #26	NGB (ENSPCTG00005022742) #27	POMT2 (ENSPCTG00005022743) #28	GSTZ1 (ENSPCTG00005022747) #29	TMED8 (ENSPCTG00005022751) #30	SAMD15 (ENSPCTG00005022753) #31	NOXRED1 (ENSPCTG00005022754) #32	VIPAS39 (ENSPCTG00005022757) #33	AHSA1 (ENSPCTG00005022762) #34	ENSPCTG00005022763	SPTLC2 (ENSPCTG00005022764) #36	ENSPCTG00005022767
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00550000074954	ENSGT00940000158980.b	ENSGT00940000159276 #7	ENSGT00990000207089	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144.i #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT01100000263976
Dolphin	MODERN SPECIES	1634														VASH1 (ENSTTRG00000013216) #19	ANGEL1 (ENSTTRG00000013227) #20	LRRC74A (ENSTTRG00000013238) #22
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT00940000158980.b	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00940000157848.e.b	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000163894	ENSGT00940000153433.A.c #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00390000008694.b.b.c.b	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144.i #34	ENSGT00940000163359	ENSGT00940000155786 #36
Vaquita	MODERN SPECIES	11	ENSPSNG00000011136	FOS (ENSPSNG00000011265) #7	JDP2 (ENSPSNG00000011391) #8	BATF (ENSPSNG00000011426) #10	FLVCR2 (ENSPSNG00000011492) #11	ENSPSNG00000011652	ENSPSNG00000011740 #12	TTLL5 (ENSPSNG00000011911) #13	TGFB3 (ENSPSNG00000012105) #15	IFT43 (ENSPSNG00000012173) #16	GPATCH2L (ENSPSNG00000012249) #17	ENSPSNG00000012346	ENSPSNG00000012381 #18	VASH1 (ENSPSNG00000012543) #19	ANGEL1 (ENSPSNG00000012647) #20	LRRC74A (ENSPSNG00000012753) #22	IRF2BPL (ENSPSNG00000012906) #23	CIPC (ENSPSNG00000012933) #24	ZDHHC22 (ENSPSNG00000012975) #25	ENSPSNG00000013023	TMEM63C (ENSPSNG00000013143) #26	POMT2 (ENSPSNG00000013313) #28	GSTZ1 (ENSPSNG00000013569) #29	TMED8 (ENSPSNG00000013882) #30	ENSPSNG00000013946 #31	NOXRED1 (ENSPSNG00000014003) #32	VIPAS39 (ENSPSNG00000014361) #33	AHSA1 (ENSPSNG00000016248) #34	ENSPSNG00000016368	SPTLC2 (ENSPSNG00000016411) #36	ENSPSNG00000016480
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00550000074954	ENSGT00940000158980.b	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.f #11	ENSGT00940000157848.e.b	ENSGT00390000010925 #12	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A.c #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00390000008694.b.b.c.b	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144.i #34	ENSGT00940000163359	ENSGT00940000155786 #36
Narwhal	MODERN SPECIES	308	FOS (ENSMMNG00015017653) #7	JDP2 (ENSMMNG00015017702) #8	BATF (ENSMMNG00015017732) #10	FLVCR2 (ENSMMNG00015017770) #11	ENSMMNG00015017843	ERG28 (ENSMMNG00015017871) #12	TTLL5 (ENSMMNG00015017967) #13	TGFB3 (ENSMMNG00015018097) #15	IFT43 (ENSMMNG00015018141) #16	GPATCH2L (ENSMMNG00015018269) #17	ENSMMNG00015018309	ESRRB (ENSMMNG00015018328) #18	ENSMMNG00015018357	VASH1 (ENSMMNG00015018381) #19	ANGEL1 (ENSMMNG00015018429) #20	LRRC74A (ENSMMNG00015018485) #22	IRF2BPL (ENSMMNG00015018529) #23	CIPC (ENSMMNG00015018547) #24	ZDHHC22 (ENSMMNG00015018577) #25	ENSMMNG00015018596	TMEM63C (ENSMMNG00015018635) #26	NGB (ENSMMNG00015018698) #27	POMT2 (ENSMMNG00015018751) #28	GSTZ1 (ENSMMNG00015018870) #29	TMED8 (ENSMMNG00015019000) #30	ENSMMNG00015013966 #31	NOXRED1 (ENSMMNG00015013981) #32	VIPAS39 (ENSMMNG00015014059) #33	AHSA1 (ENSMMNG00015014114) #34	ENSMMNG00015014132	SPTLC2 (ENSMMNG00015014140) #36
Beluga whale	MODERN SPECIES	24	NEK9 (ENSDLEG00000004467)	TMED10 (ENSDLEG00000004453)	FOS (ENSDLEG00000004446) #7	JDP2 (ENSDLEG00000004438) #8	BATF (ENSDLEG00000004433) #10	ENSDLEG00000004427	FLVCR2 (ENSDLEG00000004419) #11	ENSDLEG00000004414 #12	TTLL5 (ENSDLEG00000004346) #13	TGFB3 (ENSDLEG00000004324) #15	IFT43 (ENSDLEG00000004317) #16	GPATCH2L (ENSDLEG00000004311) #17	ENSDLEG00000014867 #18	VASH1 (ENSDLEG00000014847) #19	ANGEL1 (ENSDLEG00000014827) #20	ENSDLEG00000014819 #22	IRF2BPL (ENSDLEG00000014813) #23	CIPC (ENSDLEG00000014800) #24	ZDHHC22 (ENSDLEG00000014796) #25	ENSDLEG00000014780	TMEM63C (ENSDLEG00000014740) #26	POMT2 (ENSDLEG00000014667) #28	GSTZ1 (ENSDLEG00000014629) #29	TMED8 (ENSDLEG00000014615) #30	SAMD15 (ENSDLEG00000014612) #31	VIPAS39 (ENSDLEG00000014583) #33	AHSA1 (ENSDLEG00000014552) #34	ENSDLEG00000014530 #35	SPTLC2 (ENSDLEG00000014493) #36	ENSDLEG00000014481 #37	SLIRP (ENSDLEG00000014469)
Atlantogenata	ANCESTRAL SPECIES	8	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00940000165448	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Afrotheria	ANCESTRAL SPECIES																	ENSGT00940000154297.A #22
Tenrec	MODERN SPECIES	812																ENSETEG00000011211 #22
Afrotheria_a	ANCESTRAL SPECIES																	ENSGT00940000154297.A #22
Hyrax	MODERN SPECIES	252																LRRC74A (ENSPCAG00000010373) #22
Xenarthra	ANCESTRAL SPECIES	130												ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37	ENSGT00390000008624
Armadillo	MODERN SPECIES	1044												GPATCH2L (ENSDNOG00000004924) #17	ESRRB (ENSDNOG00000032014) #18	VASH1 (ENSDNOG00000008550) #19	ANGEL1 (ENSDNOG00000008557) #20	LRRC74A (ENSDNOG00000008572) #22	IRF2BPL (ENSDNOG00000043798) #23	CIPC (ENSDNOG00000048448) #24	ZDHHC22 (ENSDNOG00000008145) #25	TMEM63C (ENSDNOG00000017280) #26	POMT2 (ENSDNOG00000046403) #28	GSTZ1 (ENSDNOG00000017287) #29	TMED8 (ENSDNOG00000017291) #30	ENSDNOG00000044188 #31	VIPAS39 (ENSDNOG00000004265) #33	AHSA1 (ENSDNOG00000004285) #34	ENSDNOG00000000262	SPTLC2 (ENSDNOG00000006323) #36	ALKBH1 (ENSDNOG00000007719) #37	SLIRP (ENSDNOG00000007721)	SNW1 (ENSDNOG00000041233)
Sloth	MODERN SPECIES	297																ENSCHOG00000004466 #22
Marsupialia	ANCESTRAL SPECIES		ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Diprotodontia	ANCESTRAL SPECIES		ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000155070	ENSGT00940000162651	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Diprotodontia_a	ANCESTRAL SPECIES	1	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT01050000247308	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
koala	MODERN SPECIES	24	ENSPCIG00000008743	ENSPCIG00000008744	NEK9 (ENSPCIG00000008745)	TMED10 (ENSPCIG00000008746)	FOS (ENSPCIG00000008747) #7	JDP2 (ENSPCIG00000030932) #8	BATF (ENSPCIG00000002791) #10	FLVCR2 (ENSPCIG00000002780) #11	ERG28 (ENSPCIG00000002771) #12	ENSPCIG00000002659	TGFB3 (ENSPCIG00000002617) #15	IFT43 (ENSPCIG00000002595) #16	GPATCH2L (ENSPCIG00000010391) #17	ESRRB (ENSPCIG00000036136) #18	VASH1 (ENSPCIG00000026927) #19	ENSPCIG00000026922 #22	ENSPCIG00000026920	ANGEL1 (ENSPCIG00000026915) #20	IRF2BPL (ENSPCIG00000036236) #23	CIPC (ENSPCIG00000034204) #24	ZDHHC22 (ENSPCIG00000026906) #25	TMEM63C (ENSPCIG00000026891) #26	NGB (ENSPCIG00000026888) #27	POMT2 (ENSPCIG00000026881) #28	ENSPCIG00000036654	GSTZ1 (ENSPCIG00000026873) #29	TMED8 (ENSPCIG00000026869) #30	ENSPCIG00000026867 #31	NOXRED1 (ENSPCIG00000026865) #32	VIPAS39 (ENSPCIG00000026856) #33	AHSA1 (ENSPCIG00000026852) #34
Common wonbat	MODERN SPECIES	1131	NEK9 (ENSVURG00010018126)	TMED10 (ENSVURG00010018116)	FOS (ENSVURG00010018097) #7	JDP2 (ENSVURG00010018087) #8	ENSVURG00010018078	BATF (ENSVURG00010018071) #10	FLVCR2 (ENSVURG00010018065) #11	TTLL5 (ENSVURG00010016488) #13	ENSVURG00010016321 #15	IFT43 (ENSVURG00010016308) #16	GPATCH2L (ENSVURG00010016289) #17	ENSVURG00010016277	ESRRB (ENSVURG00010016250) #18	VASH1 (ENSVURG00010016226) #19	ANGEL1 (ENSVURG00010016201) #20	ENSVURG00010016192 #22	ENSVURG00010016186	IRF2BPL (ENSVURG00010016177) #23	CIPC (ENSVURG00010016167) #24	ENSVURG00010016162 #25	TMEM63C (ENSVURG00010016142) #26	NGB (ENSVURG00010016130) #27	POMT2 (ENSVURG00010015807) #28	GSTZ1 (ENSVURG00010015720) #29	TMED8 (ENSVURG00010015698) #30	ENSVURG00010015690 #31	NOXRED1 (ENSVURG00010015686) #32	VIPAS39 (ENSVURG00010015264) #33	AHSA1 (ENSVURG00010015233) #34	ENSVURG00010015228	SPTLC2 (ENSVURG00010015210) #36
Wallaby	MODERN SPECIES	954																ENSMEUG00000001752 #22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000017992	NEK9 (ENSSHAG00000017943)	TMED10 (ENSSHAG00000028092)	FOS (ENSSHAG00000017780) #7	JDP2 (ENSSHAG00000025173) #8	ENSSHAG00000029697	BATF (ENSSHAG00000023550) #10	FLVCR2 (ENSSHAG00000016893) #11	ERG28 (ENSSHAG00000020554) #12	ENSSHAG00000016129	TGFB3 (ENSSHAG00000031613) #15	IFT43 (ENSSHAG00000028793) #16	GPATCH2L (ENSSHAG00000014999) #17	ESRRB (ENSSHAG00000013695) #18	VASH1 (ENSSHAG00000012367) #19	LRRC74A (ENSSHAG00000011870) #22	ANGEL1 (ENSSHAG00000012214) #20	ENSSHAG00000024200 #23	ENSSHAG00000026555 #25	ENSSHAG00000009878 #24	TMEM63C (ENSSHAG00000008082) #26	NGB (ENSSHAG00000007639) #27	POMT2 (ENSSHAG00000007082) #28	GSTZ1 (ENSSHAG00000027547) #29	TMED8 (ENSSHAG00000021146) #30	ENSSHAG00000022748 #31	NOXRED1 (ENSSHAG00000029126) #32	VIPAS39 (ENSSHAG00000004996) #33	AHSA1 (ENSSHAG00000004788) #34	ENSSHAG00000021698	SPTLC2 (ENSSHAG00000030762) #36
Opossum	MODERN SPECIES		FOS (ENSMODG00000005927) #7	ENSMODG00000041453	JDP2 (ENSMODG00000051073) #8	ENSMODG00000049733	BATF (ENSMODG00000005905) #10	ENSMODG00000005902	ENSMODG00000047729	FLVCR2 (ENSMODG00000040198) #11	ERG28 (ENSMODG00000005762) #12	ENSMODG00000005740	TGFB3 (ENSMODG00000005658) #15	IFT43 (ENSMODG00000005632) #16	GPATCH2L (ENSMODG00000005608) #17	ESRRB (ENSMODG00000005586) #18	VASH1 (ENSMODG00000005568) #19	LRRC74A (ENSMODG00000005536) #22	ANGEL1 (ENSMODG00000005548) #20	CIPC (ENSMODG00000005520) #24	ZDHHC22 (ENSMODG00000005513) #25	TMEM63C (ENSMODG00000005511) #26	NGB (ENSMODG00000005475) #27	POMT2 (ENSMODG00000005462) #28	GSTZ1 (ENSMODG00000005427) #29	TMED8 (ENSMODG00000005418) #30	ENSMODG00000005415 #31	NOXRED1 (ENSMODG00000005406) #32	VIPAS39 (ENSMODG00000005399) #33	ENSMODG00000005301	AHSA1 (ENSMODG00000005376) #34	SPTLC2 (ENSMODG00000005287) #36	ALKBH1 (ENSMODG00000005263) #37
Platypus	MODERN SPECIES		ENSOANG00000043220	ENSOANG00000039964	NEK9 (ENSOANG00000007750)	TMED10 (ENSOANG00000045312)	FOS (ENSOANG00000005064) #7	ENSOANG00000046733 #10	FLVCR2 (ENSOANG00000005066) #11	ERG28 (ENSOANG00000005067) #12	ENSOANG00000005068	TGFB3 (ENSOANG00000046243) #15	IFT43 (ENSOANG00000038679) #16	GPATCH2L (ENSOANG00000044936) #17	ESRRB (ENSOANG00000030201) #18	ANGEL1 (ENSOANG00000010589) #20	VASH1 (ENSOANG00000010588) #19	LRRC74A (ENSOANG00000042539) #22	CIPC (ENSOANG00000010591) #24	ZDHHC22 (ENSOANG00000048369) #25	ENSOANG00000010595 #26	ENSOANG00000010597 #27	POMT2 (ENSOANG00000010598) #28	GSTZ1 (ENSOANG00000010600) #29	TMED8 (ENSOANG00000010601) #30	ENSOANG00000043920 #31	NOXRED1 (ENSOANG00000010603) #32	VIPAS39 (ENSOANG00000010604) #33	AHSA1 (ENSOANG00000010606) #34	ENSOANG00000046895	SPTLC2 (ENSOANG00000050741) #36	ENSOANG00000043571 #37	ENSOANG00000022366
Sauria	ANCESTRAL SPECIES	3	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Lepidosauria	ANCESTRAL SPECIES	24	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22
tuatara	MODERN SPECIES	522	NEK9 (ENSSPUG00000014413)	TMED10 (ENSSPUG00000014389)	FOS (ENSSPUG00000014379) #7	JDP2 (ENSSPUG00000014368) #8	BATF (ENSSPUG00000014361) #10	FLVCR2 (ENSSPUG00000014311) #11	ERG28 (ENSSPUG00000014300) #12	ENSSPUG00000014265	ENSSPUG00000014249	TGFB3 (ENSSPUG00000014236) #15	IFT43 (ENSSPUG00000014221) #16	GPATCH2L (ENSSPUG00000014207) #17	ESRRB (ENSSPUG00000014193) #18	VASH1 (ENSSPUG00000014181) #19	ANGEL1 (ENSSPUG00000014165) #20	LRRC74A (ENSSPUG00000014134) #22
Episquamata	ANCESTRAL SPECIES		ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37	ENSGT00390000008624
Laterata	ANCESTRAL SPECIES	2	ENSGT00390000011103.B	ENSGT00940000160947	ENSGT00940000156145	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37	ENSGT00390000008624	ENSGT00390000010423
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES		JDP2 (ENSPMRG00000007196) #8	BATF (ENSPMRG00000007182) #10	FLVCR2 (ENSPMRG00000007159) #11	ERG28 (ENSPMRG00000007143) #12	ENSPMRG00000006845	ENSPMRG00000006771	TGFB3 (ENSPMRG00000006766) #15	IFT43 (ENSPMRG00000006760) #16	GPATCH2L (ENSPMRG00000006752) #17	ENSPMRG00000006748	ESRRB (ENSPMRG00000006738) #18	ENSPMRG00000006732	VASH1 (ENSPMRG00000006720) #19	ANGEL1 (ENSPMRG00000006709) #20	ENSPMRG00000006702 #22	ENSPMRG00000006690 #22	ENSPMRG00000006667	IRF2BPL (ENSPMRG00000002619) #23	ZDHHC22 (ENSPMRG00000002613) #25	ENSPMRG00000002609	TMEM63C (ENSPMRG00000002583) #26	NGB (ENSPMRG00000002578) #27	ENSPMRG00000002573	POMT2 (ENSPMRG00000002561) #28	GSTZ1 (ENSPMRG00000002555) #29	ENSPMRG00000002548 #30	ENSPMRG00000002541 #30	ENSPMRG00000002535 #31	VIPAS39 (ENSPMRG00000002523) #33	AHSA1 (ENSPMRG00000002514) #34	ENSPMRG00000002510
Common wall lizard	MODERN SPECIES		FOS (ENSPMRG00000007201) #7	JDP2 (ENSPMRG00000007196) #8	BATF (ENSPMRG00000007182) #10	FLVCR2 (ENSPMRG00000007159) #11	ERG28 (ENSPMRG00000007143) #12	ENSPMRG00000006845	ENSPMRG00000006771	TGFB3 (ENSPMRG00000006766) #15	IFT43 (ENSPMRG00000006760) #16	GPATCH2L (ENSPMRG00000006752) #17	ENSPMRG00000006748	ESRRB (ENSPMRG00000006738) #18	ENSPMRG00000006732	VASH1 (ENSPMRG00000006720) #19	ANGEL1 (ENSPMRG00000006709) #20	ENSPMRG00000006702 #22	ENSPMRG00000006690 #22	ENSPMRG00000006667	IRF2BPL (ENSPMRG00000002619) #23	ZDHHC22 (ENSPMRG00000002613) #25	ENSPMRG00000002609	TMEM63C (ENSPMRG00000002583) #26	NGB (ENSPMRG00000002578) #27	ENSPMRG00000002573	POMT2 (ENSPMRG00000002561) #28	GSTZ1 (ENSPMRG00000002555) #29	ENSPMRG00000002548 #30	ENSPMRG00000002541 #30	ENSPMRG00000002535 #31	VIPAS39 (ENSPMRG00000002523) #33	AHSA1 (ENSPMRG00000002514) #34
Argentine black and white tegu	MODERN SPECIES	14	NEK9 (ENSSMRG00000012582)	TMED10 (ENSSMRG00000012581)	ENSSMRG00000012579	FOS (ENSSMRG00000012578) #7	JDP2 (ENSSMRG00000012575) #8	BATF (ENSSMRG00000012569) #10	FLVCR2 (ENSSMRG00000012568) #11	ERG28 (ENSSMRG00000012567) #12	ENSSMRG00000012566	TGFB3 (ENSSMRG00000012564) #15	IFT43 (ENSSMRG00000012543) #16	GPATCH2L (ENSSMRG00000012542) #17	ESRRB (ENSSMRG00000012529) #18	VASH1 (ENSSMRG00000012505) #19	ANGEL1 (ENSSMRG00000012502) #20	LRRC74A (ENSSMRG00000012501) #22	IRF2BPL (ENSSMRG00000012494) #23	ZDHHC22 (ENSSMRG00000012486) #25	TMEM63C (ENSSMRG00000012480) #26	NGB (ENSSMRG00000012478) #27	POMT2 (ENSSMRG00000012457) #28	GSTZ1 (ENSSMRG00000012456) #29	TMED8 (ENSSMRG00000012453) #30	ENSSMRG00000012452 #31	VIPAS39 (ENSSMRG00000012448) #33	AHSA1 (ENSSMRG00000012446) #34	ENSSMRG00000012444	SPTLC2 (ENSSMRG00000012443) #36	ALKBH1 (ENSSMRG00000012442) #37	ENSSMRG00000012441	SNW1 (ENSSMRG00000012439)
Toxicofera	ANCESTRAL SPECIES	5	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37	ENSGT00390000008624
Lizard	MODERN SPECIES		TMED10 (ENSACAG00000045345)	FOS (ENSACAG00000016921) #7	JDP2 (ENSACAG00000042584) #8	BATF (ENSACAG00000016951) #10	FLVCR2 (ENSACAG00000016955) #11	ERG28 (ENSACAG00000038620) #12	ENSACAG00000044320	ENSACAG00000016982	TGFB3 (ENSACAG00000017020) #15	ENSACAG00000036647	GPATCH2L (ENSACAG00000017060) #17	ENSACAG00000017053 #16	ESRRB (ENSACAG00000017071) #18	VASH1 (ENSACAG00000017090) #19	ANGEL1 (ENSACAG00000017113) #20	ENSACAG00000017127 #22	ENSACAG00000036604	ENSACAG00000038572	ZDHHC22 (ENSACAG00000017136) #25	ENSACAG00000041085	TMEM63C (ENSACAG00000017142) #26	NGB (ENSACAG00000038100) #27	POMT2 (ENSACAG00000017170) #28	GSTZ1 (ENSACAG00000017198) #29	TMED8 (ENSACAG00000017209) #30	ENSACAG00000017210 #31	NOXRED1 (ENSACAG00000017211) #32	VIPAS39 (ENSACAG00000017214) #33	AHSA1 (ENSACAG00000017239) #34	ENSACAG00000017257	SPTLC2 (ENSACAG00000017261) #36
Elapidae	ANCESTRAL SPECIES	3	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37	ENSGT00390000008624
Elapidae_a	ANCESTRAL SPECIES	4	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144.k #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37	ENSGT00390000008624
Acanthophiinae	ANCESTRAL SPECIES	6	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.m #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00390000013955 #33	ENSGT00940000155144.k #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37	ENSGT00390000008624	ENSGT00390000010423
Mainland tiger snake	MODERN SPECIES	8	TMED10 (ENSNSUG00000002049)	FOS (ENSNSUG00000002048) #7	JDP2 (ENSNSUG00000002045) #8	BATF (ENSNSUG00000002044) #10	ENSNSUG00000002043 #11	ENSNSUG00000002042	ENSNSUG00000002040 #11	ERG28 (ENSNSUG00000002030) #12	ENSNSUG00000002024	TTLL5 (ENSNSUG00000002014) #13	TGFB3 (ENSNSUG00000001959) #15	GPATCH2L (ENSNSUG00000001958) #17	ESRRB (ENSNSUG00000001841) #18	VASH1 (ENSNSUG00000001830) #19	ANGEL1 (ENSNSUG00000001825) #20	ENSNSUG00000001823 #22	IRF2BPL (ENSNSUG00000001818) #23	ZDHHC22 (ENSNSUG00000001814) #25	TMEM63C (ENSNSUG00000001800) #26	NGB (ENSNSUG00000001788) #27	POMT2 (ENSNSUG00000001777) #28	TMED8 (ENSNSUG00000001775) #30	ENSNSUG00000001774 #31	VIPAS39 (ENSNSUG00000000759) #33	ENSNSUG00000000754 #34	ENSNSUG00000000748 #34	ENSNSUG00000000746	SPTLC2 (ENSNSUG00000000479) #36	ALKBH1 (ENSNSUG00000000475) #37	SLIRP (ENSNSUG00000000470)	SNW1 (ENSNSUG00000000459)
Eastern brown snake	MODERN SPECIES	1	ZC2HC1C (ENSPTXG00000004475)	NEK9 (ENSPTXG00000004480)	TMED10 (ENSPTXG00000004528)	FOS (ENSPTXG00000004529) #7	JDP2 (ENSPTXG00000004530) #8	BATF (ENSPTXG00000004531) #10	FLVCR2 (ENSPTXG00000004532) #11	ERG28 (ENSPTXG00000004533) #12	ENSPTXG00000004534	TGFB3 (ENSPTXG00000004536) #15	IFT43 (ENSPTXG00000004537) #16	GPATCH2L (ENSPTXG00000004538) #17	ESRRB (ENSPTXG00000004539) #18	VASH1 (ENSPTXG00000004540) #19	ANGEL1 (ENSPTXG00000004541) #20	ENSPTXG00000004542 #22	ENSPTXG00000004543	IRF2BPL (ENSPTXG00000004544) #23	ZDHHC22 (ENSPTXG00000004545) #25	TMEM63C (ENSPTXG00000004547) #26	NGB (ENSPTXG00000004548) #27	POMT2 (ENSPTXG00000004552) #28	GSTZ1 (ENSPTXG00000005215) #29	TMED8 (ENSPTXG00000005216) #30	ENSPTXG00000005217 #31	VIPAS39 (ENSPTXG00000005218) #33	AHSA1 (ENSPTXG00000005219) #34	ENSPTXG00000005220	SPTLC2 (ENSPTXG00000005221) #36	ALKBH1 (ENSPTXG00000005222) #37	SNW1 (ENSPTXG00000005223)
Blue-lipped sea krait	MODERN SPECIES	5291														VASH1 (ENSLLTG00000006644) #19	ANGEL1 (ENSLLTG00000006621) #20	ENSLLTG00000006606 #22
Indian cobra	MODERN SPECIES		ZC2HC1C (ENSNNAG00000016951)	NEK9 (ENSNNAG00000016962)	TMED10 (ENSNNAG00000016991)	FOS (ENSNNAG00000016993) #7	JDP2 (ENSNNAG00000016998) #8	BATF (ENSNNAG00000017004) #10	FLVCR2 (ENSNNAG00000017019) #11	ERG28 (ENSNNAG00000017050) #12	ENSNNAG00000017067	TGFB3 (ENSNNAG00000017102) #15	ENSNNAG00000017111	GPATCH2L (ENSNNAG00000017123) #17	ESRRB (ENSNNAG00000017128) #18	VASH1 (ENSNNAG00000017141) #19	ANGEL1 (ENSNNAG00000017146) #20	ENSNNAG00000017149 #22	IRF2BPL (ENSNNAG00000017157) #23	ZDHHC22 (ENSNNAG00000017158) #25	TMEM63C (ENSNNAG00000017164) #26	NGB (ENSNNAG00000017172) #27	POMT2 (ENSNNAG00000017207) #28	GSTZ1 (ENSNNAG00000017413) #29	TMED8 (ENSNNAG00000017427) #30	ENSNNAG00000017433 #31	VIPAS39 (ENSNNAG00000017445) #33	AHSA1 (ENSNNAG00000000159) #34	ENSNNAG00000000161	SPTLC2 (ENSNNAG00000000164) #36	ALKBH1 (ENSNNAG00000000169) #37	SLIRP (ENSNNAG00000000174)	SNW1 (ENSNNAG00000000178)
Archelosauria	ANCESTRAL SPECIES	2	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Cryptodira	ANCESTRAL SPECIES	3	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Testudinoidea	ANCESTRAL SPECIES	3	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Testudinidae	ANCESTRAL SPECIES	2	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00940000170390
Abingdon island giant tortoise	MODERN SPECIES	2201	TMED10 (ENSCABG00000022757)	FOS (ENSCABG00000022762) #7	JDP2 (ENSCABG00000022764) #8	BATF (ENSCABG00000022766) #10	ENSCABG00000022767 #11	ENSCABG00000022769 #11	ERG28 (ENSCABG00000022770) #12	ENSCABG00000022772	TTLL5 (ENSCABG00000022774) #13	TGFB3 (ENSCABG00000022777) #15	ENSCABG00000022779	GPATCH2L (ENSCABG00000022782) #17	ESRRB (ENSCABG00000022784) #18	VASH1 (ENSCABG00000022787) #19	ANGEL1 (ENSCABG00000022790) #20	LRRC74A (ENSCABG00000022791) #22	IRF2BPL (ENSCABG00000022794) #23	CIPC (ENSCABG00000022795) #24	ZDHHC22 (ENSCABG00000022796) #25	TMEM63C (ENSCABG00000022797) #26	NGB (ENSCABG00000022798) #27	POMT2 (ENSCABG00000022799) #28	GSTZ1 (ENSCABG00000022801) #29	TMED8 (ENSCABG00000022802) #30	ENSCABG00000022803 #31	NOXRED1 (ENSCABG00000022804) #32	VIPAS39 (ENSCABG00000022807) #33	AHSA1 (ENSCABG00000022811) #34	ENSCABG00000022814	SPTLC2 (ENSCABG00000022816) #36	ALKBH1 (ENSCABG00000022819) #37
Goode s thornscrub tortoise	MODERN SPECIES	18	ZC2HC1C (ENSGEVG00005002199)	NEK9 (ENSGEVG00005002164)	TMED10 (ENSGEVG00005002145)	FOS (ENSGEVG00005002133) #7	JDP2 (ENSGEVG00005002120) #8	BATF (ENSGEVG00005002108) #10	FLVCR2 (ENSGEVG00005002085) #11	ERG28 (ENSGEVG00005002067) #12	ENSGEVG00005001531	TGFB3 (ENSGEVG00005001201) #15	IFT43 (ENSGEVG00005001178) #16	GPATCH2L (ENSGEVG00005001162) #17	ESRRB (ENSGEVG00005001119) #18	VASH1 (ENSGEVG00005001100) #19	ANGEL1 (ENSGEVG00005001078) #20	LRRC74A (ENSGEVG00005001053) #22	IRF2BPL (ENSGEVG00005001041) #23	ENSGEVG00005001025	ZDHHC22 (ENSGEVG00005001002) #25	TMEM63C (ENSGEVG00005000959) #26	NGB (ENSGEVG00005000914) #27	POMT2 (ENSGEVG00005000703) #28	GSTZ1 (ENSGEVG00005000523) #29	ENSGEVG00005000482	TMED8 (ENSGEVG00005000454) #30	ENSGEVG00005000432 #31	NOXRED1 (ENSGEVG00005000402) #32	VIPAS39 (ENSGEVG00005000346) #33	AHSA1 (ENSGEVG00005000319) #34	ENSGEVG00005000296	SPTLC2 (ENSGEVG00005000254) #36
Emydidae	ANCESTRAL SPECIES	2	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00900000143573	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00940000170390	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Three-toed box turtle	MODERN SPECIES	40	ZC2HC1C (ENSTMTG00000014553)	NEK9 (ENSTMTG00000014568)	TMED10 (ENSTMTG00000014603)	FOS (ENSTMTG00000014616) #7	JDP2 (ENSTMTG00000014629) #8	BATF (ENSTMTG00000014636) #10	FLVCR2 (ENSTMTG00000014652) #11	ERG28 (ENSTMTG00000014676) #12	ENSTMTG00000014814	TGFB3 (ENSTMTG00000016700) #15	IFT43 (ENSTMTG00000016727) #16	GPATCH2L (ENSTMTG00000016753) #17	ESRRB (ENSTMTG00000016774) #18	VASH1 (ENSTMTG00000016803) #19	ANGEL1 (ENSTMTG00000016822) #20	LRRC74A (ENSTMTG00000016848) #22	IRF2BPL (ENSTMTG00000016951) #23	ENSTMTG00000016958	ZDHHC22 (ENSTMTG00000016976) #25	TMEM63C (ENSTMTG00000017003) #26	NGB (ENSTMTG00000017043) #27	POMT2 (ENSTMTG00000017060) #28	GSTZ1 (ENSTMTG00000017096) #29	ENSTMTG00000017118	TMED8 (ENSTMTG00000017143) #30	ENSTMTG00000017153 #31	NOXRED1 (ENSTMTG00000017165) #32	VIPAS39 (ENSTMTG00000017183) #33	AHSA1 (ENSTMTG00000017239) #34	ENSTMTG00000017245	SPTLC2 (ENSTMTG00000017252) #36
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	13	TMED10 (ENSCPBG00000026244)	FOS (ENSCPBG00000026248) #7	JDP2 (ENSCPBG00000026250) #8	BATF (ENSCPBG00000026252) #10	FLVCR2 (ENSCPBG00000026254) #11	ERG28 (ENSCPBG00000026257) #12	ENSCPBG00000026263	ENSCPBG00000026268	TGFB3 (ENSCPBG00000026269) #15	IFT43 (ENSCPBG00000026270) #16	ENSCPBG00000026271	ESRRB (ENSCPBG00000026275) #18	VASH1 (ENSCPBG00000026276) #19	ANGEL1 (ENSCPBG00000026277) #20	ENSCPBG00000026278 #22	ENSCPBG00000026279 #22	ZDHHC22 (ENSCPBG00000026285) #25	TMEM63C (ENSCPBG00000026289) #26	NGB (ENSCPBG00000026302) #27	POMT2 (ENSCPBG00000026306) #28	GSTZ1 (ENSCPBG00000026307) #29	ENSCPBG00000026310	TMED8 (ENSCPBG00000026313) #30	ENSCPBG00000026315 #31	NOXRED1 (ENSCPBG00000026316) #32	VIPAS39 (ENSCPBG00000026317) #33	AHSA1 (ENSCPBG00000026319) #34	ENSCPBG00000026320	SPTLC2 (ENSCPBG00000026322) #36	ENSCPBG00000026324	ALKBH1 (ENSCPBG00000026326) #37
painted turtle	MODERN SPECIES	13	NEK9 (ENSCPBG00000026242)	TMED10 (ENSCPBG00000026244)	FOS (ENSCPBG00000026248) #7	JDP2 (ENSCPBG00000026250) #8	BATF (ENSCPBG00000026252) #10	FLVCR2 (ENSCPBG00000026254) #11	ERG28 (ENSCPBG00000026257) #12	ENSCPBG00000026263	ENSCPBG00000026268	TGFB3 (ENSCPBG00000026269) #15	IFT43 (ENSCPBG00000026270) #16	ENSCPBG00000026271	ESRRB (ENSCPBG00000026275) #18	VASH1 (ENSCPBG00000026276) #19	ANGEL1 (ENSCPBG00000026277) #20	ENSCPBG00000026278 #22	ENSCPBG00000026279 #22	ZDHHC22 (ENSCPBG00000026285) #25	TMEM63C (ENSCPBG00000026289) #26	NGB (ENSCPBG00000026302) #27	POMT2 (ENSCPBG00000026306) #28	GSTZ1 (ENSCPBG00000026307) #29	ENSCPBG00000026310	TMED8 (ENSCPBG00000026313) #30	ENSCPBG00000026315 #31	NOXRED1 (ENSCPBG00000026316) #32	VIPAS39 (ENSCPBG00000026317) #33	AHSA1 (ENSCPBG00000026319) #34	ENSCPBG00000026320	SPTLC2 (ENSCPBG00000026322) #36	ENSCPBG00000026324
Chinese turtle	MODERN SPECIES	666	ZC2HC1C (ENSPSIG00000017503)	NEK9 (ENSPSIG00000017508)	TMED10 (ENSPSIG00000017584)	FOS (ENSPSIG00000017598) #7	JDP2 (ENSPSIG00000017647) #8	BATF (ENSPSIG00000017659) #10	FLVCR2 (ENSPSIG00000017663) #11	ERG28 (ENSPSIG00000017766) #12	ENSPSIG00000017794	TGFB3 (ENSPSIG00000017861) #15	IFT43 (ENSPSIG00000017883) #16	GPATCH2L (ENSPSIG00000017892) #17	ESRRB (ENSPSIG00000017916) #18	VASH1 (ENSPSIG00000018009) #19	ANGEL1 (ENSPSIG00000018028) #20	LRRC74A (ENSPSIG00000018030) #22	IRF2BPL (ENSPSIG00000000390) #23	ENSPSIG00000000396	ZDHHC22 (ENSPSIG00000018058) #25	TMEM63C (ENSPSIG00000018064) #26	NGB (ENSPSIG00000004493) #27
Archosauria	ANCESTRAL SPECIES	5	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Australian saltwater crocodile	MODERN SPECIES	64	NEK9 (ENSCPRG00005005015)	TMED10 (ENSCPRG00005005026)	FOS (ENSCPRG00005005033) #7	JDP2 (ENSCPRG00005005039) #8	BATF (ENSCPRG00005005043) #10	FLVCR2 (ENSCPRG00005005058) #11	ERG28 (ENSCPRG00005005083) #12	ENSCPRG00005005097	TGFB3 (ENSCPRG00005005133) #15	IFT43 (ENSCPRG00005005170) #16	GPATCH2L (ENSCPRG00005005177) #17	ESRRB (ENSCPRG00005005204) #18	VASH1 (ENSCPRG00005005257) #19	ENSCPRG00005005259 #20	ENSCPRG00005005269 #20	LRRC74A (ENSCPRG00005005288) #22	CIPC (ENSCPRG00005005338) #24	ZDHHC22 (ENSCPRG00005005342) #25	TMEM63C (ENSCPRG00005005363) #26	NGB (ENSCPRG00005005377) #27	POMT2 (ENSCPRG00005005383) #28	GSTZ1 (ENSCPRG00005005406) #29	TMED8 (ENSCPRG00005005420) #30	ENSCPRG00005005423 #31	NOXRED1 (ENSCPRG00005005426) #32	VIPAS39 (ENSCPRG00005005434) #33	AHSA1 (ENSCPRG00005005446) #34	ENSCPRG00005005448	SPTLC2 (ENSCPRG00005005488) #36	ALKBH1 (ENSCPRG00005005493) #37	SNW1 (ENSCPRG00005005501)
Aves	ANCESTRAL SPECIES	2	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Neognathae	ANCESTRAL SPECIES	4	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Galloanserae	ANCESTRAL SPECIES	4	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Anatidae	ANCESTRAL SPECIES	9	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Pink-footed goose	MODERN SPECIES	23	ZC2HC1C (ENSABRG00000005789)	NEK9 (ENSABRG00000005273)	TMED10 (ENSABRG00000005211)	FOS (ENSABRG00000005204) #7	JDP2 (ENSABRG00000005200) #8	BATF (ENSABRG00000005195) #10	FLVCR2 (ENSABRG00000004069) #11	ERG28 (ENSABRG00000003925) #12	ENSABRG00000002595	TGFB3 (ENSABRG00000002408) #15	IFT43 (ENSABRG00000002376) #16	GPATCH2L (ENSABRG00000002331) #17	ESRRB (ENSABRG00000002310) #18	VASH1 (ENSABRG00000002267) #19	ANGEL1 (ENSABRG00000002246) #20	LRRC74A (ENSABRG00000002224) #22	IRF2BPL (ENSABRG00000002202) #23	CIPC (ENSABRG00000002191) #24	ZDHHC22 (ENSABRG00000002179) #25	TMEM63C (ENSABRG00000002149) #26	NGB (ENSABRG00000002135) #27	POMT2 (ENSABRG00000002100) #28	GSTZ1 (ENSABRG00000002081) #29	ENSABRG00000002073	TMED8 (ENSABRG00000002046) #30	ENSABRG00000002019 #31	NOXRED1 (ENSABRG00000001994) #32	VIPAS39 (ENSABRG00000001932) #33	AHSA1 (ENSABRG00000001878) #34	ENSABRG00000001841	SPTLC2 (ENSABRG00000001771) #36
Duck	MODERN SPECIES	23	ENSAPLG00000010239	NEK9 (ENSAPLG00000010802)	TMED10 (ENSAPLG00000020865)	FOS (ENSAPLG00000020281) #7	JDP2 (ENSAPLG00000011380) #8	BATF (ENSAPLG00000024395) #10	FLVCR2 (ENSAPLG00000011656) #11	ERG28 (ENSAPLG00000011876) #12	ENSAPLG00000011877	TGFB3 (ENSAPLG00000012199) #15	ENSAPLG00000012286	GPATCH2L (ENSAPLG00000012320) #17	ESRRB (ENSAPLG00000012470) #18	ANGEL1 (ENSAPLG00000012908) #20	VASH1 (ENSAPLG00000012819) #19	LRRC74A (ENSAPLG00000013057) #22	IRF2BPL (ENSAPLG00000029704) #23	CIPC (ENSAPLG00000013142) #24	ZDHHC22 (ENSAPLG00000013148) #25	NGB (ENSAPLG00000030247) #27	ENSAPLG00000028004	POMT2 (ENSAPLG00000013786) #28	GSTZ1 (ENSAPLG00000014216) #29	ENSAPLG00000014349	ENSAPLG00000014468 #31	NOXRED1 (ENSAPLG00000014469) #32	AHSA1 (ENSAPLG00000015078) #34	ENSAPLG00000028338	SPTLC2 (ENSAPLG00000015435) #36	ALKBH1 (ENSAPLG00000015685) #37	SLIRP (ENSAPLG00000000880)
Phasianidae	ANCESTRAL SPECIES	4	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Phasianidae_b	ANCESTRAL SPECIES	3	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Turkey	MODERN SPECIES	25	ZC2HC1C (ENSMGAG00000012742)	NEK9 (ENSMGAG00000012746)	TMED10 (ENSMGAG00000012754)	JDP2 (ENSMGAG00000012755) #8	BATF (ENSMGAG00000012758) #10	FLVCR2 (ENSMGAG00000012760) #11	ERG28 (ENSMGAG00000012763) #12	ENSMGAG00000012764	ENSMGAG00000012783 #15	IFT43 (ENSMGAG00000012792) #16	GPATCH2L (ENSMGAG00000012794) #17	ESRRB (ENSMGAG00000012804) #18	ENSMGAG00000012874 #30	VASH1 (ENSMGAG00000012810) #19	ANGEL1 (ENSMGAG00000012816) #20	LRRC74A (ENSMGAG00000012822) #22	ENSMGAG00000022750	ENSMGAG00000017993	ENSMGAG00000012833	ZDHHC22 (ENSMGAG00000012835) #25	TMEM63C (ENSMGAG00000012836) #26	NGB (ENSMGAG00000012850) #27	POMT2 (ENSMGAG00000012852) #28	GSTZ1 (ENSMGAG00000012865) #29	ENSMGAG00000015362 #31	NOXRED1 (ENSMGAG00000012875) #32	VIPAS39 (ENSMGAG00000012877) #33	AHSA1 (ENSMGAG00000012890) #34	ENSMGAG00000012897	SPTLC2 (ENSMGAG00000012898) #36	ALKBH1 (ENSMGAG00000012910) #37
Chicken	MODERN SPECIES	34	ZC2HC1C (ENSGALG00010006135)	NEK9 (ENSGALG00010006177)	TMED10 (ENSGALG00010006188)	FOS (ENSGALG00010006212) #7	JDP2 (ENSGALG00010004473) #8	BATF (ENSGALG00010004553) #10	FLVCR2 (ENSGALG00010005057) #11	C5H14orf1 (ENSGALG00010005077) #12	TTLL5 (ENSGALG00010005107)	TGFB3 (ENSGALG00010005146) #15	IFT43 (ENSGALG00010005158) #16	GPATCH2L (ENSGALG00010005170) #17	ESRRB (ENSGALG00010005211) #18	VASH1 (ENSGALG00010005215) #19	ANGEL1 (ENSGALG00010005220) #20	ENSGALG00010005225 #22	C5H14orf4 (ENSGALG00010006850) #23	CIPC (ENSGALG00010005229) #24	ZDHHC22 (ENSGALG00010005235) #25	TMEM63C (ENSGALG00010005238) #26	NGB (ENSGALG00010005243) #27	POMT2 (ENSGALG00010005253) #28	GSTZ1 (ENSGALG00010005270) #29	ENSGALG00010005274	TMED8 (ENSGALG00010005281) #30	ENSGALG00010005294 #31	ENSGALG00010005308	VIPAS39 (ENSGALG00010005329) #33	AHSA1 (ENSGALG00010005335) #34	ENSGALG00010004917	SPTLC2 (ENSGALG00010004933) #36
Japanese quail	MODERN SPECIES	23	ZC2HC1C (ENSCJPG00005019247)	NEK9 (ENSCJPG00005019248)	TMED10 (ENSCJPG00005019249)	FOS (ENSCJPG00005019250) #7	JDP2 (ENSCJPG00005019251) #8	BATF (ENSCJPG00005019252) #10	FLVCR2 (ENSCJPG00005019253) #11	ERG28 (ENSCJPG00005019254) #12	ENSCJPG00005019256	TGFB3 (ENSCJPG00005019265) #15	IFT43 (ENSCJPG00005019266) #16	GPATCH2L (ENSCJPG00005019267) #17	ESRRB (ENSCJPG00005019268) #18	VASH1 (ENSCJPG00005019269) #19	ANGEL1 (ENSCJPG00005019270) #20	LRRC74A (ENSCJPG00005019271) #22	IRF2BPL (ENSCJPG00005019274) #23	CIPC (ENSCJPG00005019276) #24	ZDHHC22 (ENSCJPG00005019279) #25	TMEM63C (ENSCJPG00005019281) #26	TMED8 (ENSCJPG00005019282) #30	NGB (ENSCJPG00005019283) #27	POMT2 (ENSCJPG00005019284) #28	GSTZ1 (ENSCJPG00005019285) #29	ENSCJPG00005019286	ENSCJPG00005019287 #31	VIPAS39 (ENSCJPG00005019288) #33	AHSA1 (ENSCJPG00005019289) #34	ENSCJPG00005019290	SPTLC2 (ENSCJPG00005019291) #36	ALKBH1 (ENSCJPG00005019292) #37
Neognathae_b	ANCESTRAL SPECIES	6	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.i #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Neognathae_c	ANCESTRAL SPECIES	6	ENSGT00940000160947	ENSGT00940000156145	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.i #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072.h #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36	ENSGT00390000004599 #37
Golden eagle	MODERN SPECIES	11	ZC2HC1C (ENSACCG00020002116)	NEK9 (ENSACCG00020002085)	TMED10 (ENSACCG00020002055)	FOS (ENSACCG00020002039) #7	JDP2 (ENSACCG00020002026) #8	BATF (ENSACCG00020002009) #10	FLVCR2 (ENSACCG00020001984) #11	ERG28 (ENSACCG00020001961) #12	ENSACCG00020001819	TGFB3 (ENSACCG00020001694) #15	IFT43 (ENSACCG00020001611) #16	GPATCH2L (ENSACCG00020001576) #17	ESRRB (ENSACCG00020001553) #18	VASH1 (ENSACCG00020001532) #19	ANGEL1 (ENSACCG00020001491) #20	LRRC74A (ENSACCG00020001456) #22	IRF2BPL (ENSACCG00020001439) #23	CIPC (ENSACCG00020001416) #24	ZDHHC22 (ENSACCG00020001408) #25	TMEM63C (ENSACCG00020001371) #26	NGB (ENSACCG00020001353) #27	POMT2 (ENSACCG00020001254) #28	GSTZ1 (ENSACCG00020001174) #29	TMED8 (ENSACCG00020001145) #30	ENSACCG00020001138 #31	VIPAS39 (ENSACCG00020001108) #33	AHSA1 (ENSACCG00020001087) #34	ENSACCG00020001073	SPTLC2 (ENSACCG00020001059) #36	ALKBH1 (ENSACCG00020001043) #37	ENSACCG00020001027
Kakapo	MODERN SPECIES	21	ZC2HC1C (ENSSHBG00005001804)	NEK9 (ENSSHBG00005001722)	TMED10 (ENSSHBG00005001619)	FOS (ENSSHBG00005001582) #7	JDP2 (ENSSHBG00005001554) #8	BATF (ENSSHBG00005001532) #10	FLVCR2 (ENSSHBG00005001491) #11	ERG28 (ENSSHBG00005001459) #12	ENSSHBG00005001427	TGFB3 (ENSSHBG00005000556) #15	IFT43 (ENSSHBG00005004484) #16	GPATCH2L (ENSSHBG00005004480) #17	ESRRB (ENSSHBG00005004464) #18	VASH1 (ENSSHBG00005004459) #19	ANGEL1 (ENSSHBG00005004454) #20	ENSSHBG00005004446 #22	IRF2BPL (ENSSHBG00005004443) #23	CIPC (ENSSHBG00005004437) #24	ZDHHC22 (ENSSHBG00005004434) #25	ENSSHBG00005004428 #26	ENSSHBG00005004419 #26	NGB (ENSSHBG00005004406) #27	POMT2 (ENSSHBG00005004392) #28	GSTZ1 (ENSSHBG00005004371) #29	ENSSHBG00005004357	TMED8 (ENSSHBG00005004350) #30	ENSSHBG00005004345 #31	VIPAS39 (ENSSHBG00005004337) #33	AHSA1 (ENSSHBG00005004322) #34	ENSSHBG00005004299	SPTLC2 (ENSSHBG00005004286) #36
African ostrich	MODERN SPECIES	634								FLVCR2 (ENSSCUG00000009723) #11	ERG28 (ENSSCUG00000009714) #12	ENSSCUG00000009705	TGFB3 (ENSSCUG00000009699) #15	IFT43 (ENSSCUG00000009697) #16	GPATCH2L (ENSSCUG00000009694) #17	VASH1 (ENSSCUG00000009690) #19	ANGEL1 (ENSSCUG00000009686) #20	ENSSCUG00000009682 #22	CIPC (ENSSCUG00000009677) #24	ZDHHC22 (ENSSCUG00000009675) #25	TMEM63C (ENSSCUG00000009669) #26	NGB (ENSSCUG00000009667) #27	POMT2 (ENSSCUG00000009664) #28	GSTZ1 (ENSSCUG00000009659) #29	ENSSCUG00000009657	TMED8 (ENSSCUG00000009656) #30	ENSSCUG00000009654 #31	NOXRED1 (ENSSCUG00000009653) #32	VIPAS39 (ENSSCUG00000009641) #33	AHSA1 (ENSSCUG00000009639) #34	ENSSCUG00000009637	ENSSCUG00000009635 #36	ENSSCUG00000009634 #36
Anura	ANCESTRAL SPECIES	46	ENSGT00550000074908	ENSGT00800000124176	ENSGT00390000011103.B	ENSGT00940000160947	ENSGT00940000156145	ENSGT00940000159276 #7	ENSGT00550000074954	ENSGT00940000161630	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000153433.B.b.b ##18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000162596 #23	ENSGT00510000048522 #24	ENSGT00730000111268 #25	ENSGT00940000159072 #26	ENSGT00510000048375 #27	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00390000013955 #33	ENSGT00940000155144 #34	ENSGT00940000163359	ENSGT00940000155786 #36
Frog	MODERN SPECIES	8	eif2b2 (ENSXETG00000013261)	mlh3 (ENSXETG00000013252)	ENSXETG00000040528	ENSXETG00000013249	nek9 (ENSXETG00000013239)	fos (ENSXETG00000013238) #7	ENSXETG00000041470	batf (ENSXETG00000046017) #10	flvcr2 (ENSXETG00000027282) #11	erg28 (ENSXETG00000048974) #12	ttll5 (ENSXETG00000013220)	ift43 (ENSXETG00000013218)	esrrb (ENSXETG00000013217) ##18	vash1 (ENSXETG00000013214) #19	angel1 (ENSXETG00000013213) #20	lrrc74a (ENSXETG00000011065) #22	irf2bpl (ENSXETG00000011067) #23	cipc (ENSXETG00000011071) #24	zdhhc22 (ENSXETG00000034191) #25	tmem63c (ENSXETG00000011072) #26	ENSXETG00000047072	ngb (ENSXETG00000034897) #27	pomt2 (ENSXETG00000031515) #28	gstz1 (ENSXETG00000011079) #29	ENSXETG00000032543	tmed8 (ENSXETG00000011082) #30	ahsa1 (ENSXETG00000011083) #34	vipas39 (ENSXETG00000011084) #33	noxred1 (ENSXETG00000001302) #32	samd15 (ENSXETG00000038591) #31	ism2 (ENSXETG00000027100)
Leishan spiny toad	MODERN SPECIES	4	ENSLLEG00000028362	SRP54 (ENSLLEG00000028415)	TMEM62 (ENSLLEG00000028514)	PTGR2 (ENSLLEG00000028577)	MIDEAS (ENSLLEG00000028739)	DNAL1 (ENSLLEG00000028794)	ENSLLEG00000028873	ENSLLEG00000028963	HAUS2 (ENSLLEG00000029053)	LRRC57 (ENSLLEG00000029111)	SNAP23 (ENSLLEG00000029135)	IFT43 (ENSLLEG00000029165) #16	ENSLLEG00000021879 ##18	VASH1 (ENSLLEG00000022253) #19	ENSLLEG00000022679 #20	LRRC74A (ENSLLEG00000022779) #22	IRF2BPL (ENSLLEG00000022908) #23	ENSLLEG00000022935 #24	ZDHHC22 (ENSLLEG00000023067) #25	TMEM63C (ENSLLEG00000023121) #26	NGB (ENSLLEG00000023441) #27	POMT2 (ENSLLEG00000023528) #28	GSTZ1 (ENSLLEG00000024088) #29	ENSLLEG00000024315	TMED8 (ENSLLEG00000024475) #30	NOXRED1 (ENSLLEG00000024535) #32	VIPAS39 (ENSLLEG00000024632) #33	AHSA1 (ENSLLEG00000024801) #34	ENSLLEG00000025026	ENSLLEG00000025088	SPTLC2 (ENSLLEG00000025179) #36
Actinopterygii	ANCESTRAL SPECIES	77	ENSGT00940000164930	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A #22	ENSGT00940000159815	ENSGT00930000151014	ENSGT00940000154790.b	ENSGT00440000039837	ENSGT00940000153117.B	ENSGT00940000156723	ENSGT00970000197141	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00630000089942 #31	ENSGT00950000183044.a.a.b #32	ENSGT00620000087966.a	ENSGT00390000009517
Reedfish	MODERN SPECIES	7	tmed10 (ENSECRG00000018057)	fosab (ENSECRG00000018033) #7	ENSECRG00000018013	jdp2b (ENSECRG00000017998) #8	batf (ENSECRG00000017990) #10	FLVCR2 (ENSECRG00000017949) #11	ERG28 (ENSECRG00000017922) #12	ENSECRG00000017869	ENSECRG00000017841	tgfb3 (ENSECRG00000017817) #15	IFT43 (ENSECRG00000017783) #16	GPATCH2L (ENSECRG00000017699) #17	esrrb (ENSECRG00000017650) #18	VASH1 (ENSECRG00000017605) #19	ANGEL1 (ENSECRG00000017561) #20	LRRC74A (ENSECRG00000017495) #22	RPS6KL1 (ENSECRG00000017451)	dlst (ENSECRG00000017406)	prox2 (ENSECRG00000017356)	YLPM1 (ENSECRG00000017271)	fcf1 (ENSECRG00000017173)	AREL1 (ENSECRG00000016999)	LTBP2 (ENSECRG00000015364)	ENSECRG00000015129	pomt2 (ENSECRG00000015052) #28	gstz1 (ENSECRG00000014979) #29	zgc:163014 (ENSECRG00000014930)	tmed8 (ENSECRG00000014905) #30	ENSECRG00000014869 #31	NOXRED1 (ENSECRG00000014839) #32	ATG2B (ENSECRG00000014756)
Neopterygii	DUPLICATION
Neopterygii	DUPLICATION
Neopterygii	ANCESTRAL SPECIES		ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930	ENSGT00940000155693 #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d #11	ENSGT00390000010925 #12	ENSGT00940000162910	ENSGT00940000162939 #13	ENSGT00940000155747 #15	ENSGT00390000012060 #16	ENSGT00410000025698.b #17	ENSGT00940000153433.A #18	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454	ENSGT00940000159815	ENSGT00930000151014	ENSGT00940000154790.b	ENSGT00440000039837	ENSGT00940000153117.B	ENSGT00940000156723	ENSGT00970000197141	ENSGT00940000156829 #28	ENSGT00390000006580 #29	ENSGT00940000164710	ENSGT00530000063651.b #30	ENSGT00950000183044.a.a.b #32	ENSGT00620000087966.a	ENSGT00390000009517
Osteoglossocephalai	ANCESTRAL SPECIES	13						ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000160884	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454	ENSGT00940000159815	ENSGT00930000151014	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c #11	ENSGT00940000159745 #10	ENSGT00940000155693.b #8	ENSGT00940000159276 #7
Clupeocephala	ANCESTRAL SPECIES	17					ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000160884	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
Euteleosteomorpha	ANCESTRAL SPECIES	26	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
Protacanthopterygii	ANCESTRAL SPECIES	48	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B.g	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a	ENSGT00800000124176
Salmoninae	ANCESTRAL SPECIES	224																ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.a	ENSGT00940000159815.d	ENSGT00930000151014.q.f	ENSGT00940000154790.b.a.b.d	ENSGT00940000153433.A.f.a #18	ENSGT00390000012060.c.b #16	ENSGT00940000155747.g.a.f #15	ENSGT00940000162910.o	ENSGT00390000010925.e.b #12	ENSGT01030000234625.B.d.c.a.e #11	ENSGT00940000155693.a.b.i #8	ENSGT00940000164930.a.b	ENSGT00550000074954.o.a	ENSGT00940000156145	ENSGT00940000156816.b
Salmoninae_a	ANCESTRAL SPECIES	8	ENSGT00940000155944.f.a.f	ENSGT00940000157159.e.a	ENSGT00940000159153.f.a	ENSGT00390000016097.d	ENSGT00390000003855.b.e.a.b	ENSGT00940000157441.c	ENSGT00390000003581.f	ENSGT00940000158910.g	ENSGT00950000183147.A.a.g.a.a	ENSGT00940000157776.c.b.b	ENSGT00390000008402.g	ENSGT00940000155823.A.b	ENSGT00940000156723.e	ENSGT00940000153117.B.h	ENSGT00390000012703.b.b #19	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.a	ENSGT00940000159815.d	ENSGT00930000151014.q.f	ENSGT00940000154790.b.a.b.d	ENSGT00940000153433.A.f.a #18	ENSGT00390000012060.d #16	ENSGT01000000221503	ENSGT00390000012060.c.b #16	ENSGT00940000155747.g.a.f #15	ENSGT00940000162910.o	ENSGT00390000010925.e.b #12	ENSGT01030000234625.B.d.c.a.e #11	ENSGT00940000155693.a.b.i #8	ENSGT00940000164930.a.b	ENSGT00550000074954.o.a
Salmo	ANCESTRAL SPECIES	8	ENSGT00940000155944.f.a.f	ENSGT00940000157159.e.a	ENSGT00940000155070.a.a	ENSGT00390000016097.d	ENSGT00390000003855.b.e.a.b	ENSGT00940000157441.c	ENSGT00390000003581.f	ENSGT00940000158910.g	ENSGT00950000183147.A.a.g.a.a	ENSGT00940000157776.c.b.b	ENSGT00390000008402.g	ENSGT00940000155823.A.b	ENSGT00940000156723.e	ENSGT00940000153117.B.h	ENSGT00390000012703.b.b #19	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.a	ENSGT00940000159815.d	ENSGT00930000151014.q.f	ENSGT00940000154790.b.a.b.d	ENSGT00940000153433.A.f.a #18	ENSGT01000000221503	ENSGT00390000012060.c.b #16	ENSGT00940000155747.g.a.f #15	ENSGT00940000162910.o	ENSGT00390000010925.e.b #12	ENSGT01030000234625.B.d.c.a.e #11	ENSGT00940000155693.a.b.i #8	ENSGT00940000164930.a.b	ENSGT00550000074954.o.a	ENSGT00940000156145.n
River trout	MODERN SPECIES	26	SIPA1L1 (ENSSTUG00000028163)	RGS6 (ENSSTUG00000027905)	ENSSTUG00000027887	ZFYVE1 (ENSSTUG00000027858)	CHAC1 (ENSSTUG00000027849)	DLL4 (ENSSTUG00000027679)	ENSSTUG00000027670	RASGRP1 (ENSSTUG00000026844)	SYNDIG1L (ENSSTUG00000026823)	VSX2 (ENSSTUG00000026817)	lin52 (ENSSTUG00000026785)	ENSSTUG00000021430	AREL1 (ENSSTUG00000020519)	fcf1 (ENSSTUG00000020416)	VASH1 (ENSSTUG00000020359) #19	ENSSTUG00000020330 #22	ENSSTUG00000020314	RPS6KL1 (ENSSTUG00000020299)	dlst (ENSSTUG00000019931)	prox2 (ENSSTUG00000019874)	ESRRB (ENSSTUG00000019769) #18	ENSSTUG00000019725	IFT43 (ENSSTUG00000019705) #16	tgfb3 (ENSSTUG00000019687) #15	ENSSTUG00000019537	ERG28 (ENSSTUG00000019503) #12	FLVCR2 (ENSSTUG00000019383) #11	JDP2 (ENSSTUG00000019305) #8	ENSSTUG00000019297	ENSSTUG00000019237	NEK9 (ENSSTUG00000019098)
Atlantic salmon	MODERN SPECIES		ENSSSAG00000061187	ENSSSAG00000102437	ENSSSAG00000001124	ENSSSAG00000001347	ENSSSAG00000001146	ENSSSAG00000113518	ENSSSAG00000001477	ENSSSAG00000001539	ENSSSAG00000001837	ENSSSAG00000001838	ENSSSAG00000001840	ENSSSAG00000001857	ENSSSAG00000001932	ENSSSAG00000001958	ENSSSAG00000001968 #19	ENSSSAG00000001973 #22	ENSSSAG00000090505	RPS6KL1 (ENSSSAG00000001984)	dlst (ENSSSAG00000001995)	prox2 (ENSSSAG00000002013)	ENSSSAG00000002055 #18	ENSSSAG00000002255 #16	tgfb3 (ENSSSAG00000114191) #15	ENSSSAG00000002308	FLVCR2 (ENSSSAG00000093159) #11	ERG28 (ENSSSAG00000002380) #12	ATF3 (ENSSSAG00000002471) #8	ENSSSAG00000002479	TMEDA (ENSSSAG00000002486)	nek9 (ENSSSAG00000002539)	ENSSSAG00000002314
Oncorhynchus	ANCESTRAL SPECIES	6	ENSGT00940000160477.g	ENSGT00940000155944.f.a.f	ENSGT00940000157159.e.a	ENSGT00940000159153.f.a	ENSGT00390000016097.d	ENSGT00390000003855.b.e.a.b	ENSGT00940000157441.c	ENSGT00940000158910.g	ENSGT00950000183147.A.a.g.a.a	ENSGT00940000157776.c.b.b	ENSGT00390000008402.g	ENSGT00940000155823.A.b	ENSGT00940000156723.e	ENSGT00940000153117.B.h	ENSGT00390000012703.b.b #19	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.a	ENSGT00940000159815.d	ENSGT00930000151014.q.f	ENSGT00940000154790.b.a.b.d	ENSGT00940000153433.A.f.a #18	ENSGT00390000012060.d #16	ENSGT01000000221503	ENSGT00390000012060.c.b #16	ENSGT00940000155747.g.a.f #15	ENSGT00940000162910.o	ENSGT00390000010925.f #12	ENSGT01030000234625.B.d.c.a.e #11	ENSGT00940000155693.a.b.i #8	ENSGT00940000164930.a.b	ENSGT00550000074954.o.a
Rainbow trout	MODERN SPECIES	10	ENSOMYG00000072845	RGS6 (ENSOMYG00000068949)	DPF3 (ENSOMYG00000015013)	ZFYVE1 (ENSOMYG00000014907)	ENSOMYG00000014878	ENSOMYG00000014720	ENSOMYG00000014322	ENSOMYG00000014257	ENSOMYG00000014241	ENSOMYG00000014192	ENSOMYG00000014052	ENSOMYG00000074725	ENSOMYG00000013481	ENSOMYG00000013316	ENSOMYG00000013267 #19	ENSOMYG00000013241 #22	ENSOMYG00000013211	RPS6KL1 (ENSOMYG00000013201)	dlst (ENSOMYG00000013099)	prox2 (ENSOMYG00000013066)	ENSOMYG00000013051 #18	ENSOMYG00000013041	IFT43 (ENSOMYG00000063759) #16	tgfb3 (ENSOMYG00000013023) #15	ENSOMYG00000012948	ERG28 (ENSOMYG00000012894) #12	FLVCR2 (ENSOMYG00000012856) #11	JDP2 (ENSOMYG00000012818) #8	ENSOMYG00000012816	ENSOMYG00000012809	ENSOMYG00000053306
Oncorhynchus_a	ANCESTRAL SPECIES	10	ENSGT00940000160477.g	ENSGT00940000155944.f.a.f	ENSGT00940000157159.e.a	ENSGT00940000159153.f.a	ENSGT00390000016097.d	ENSGT00390000003855.b.e.a.b	ENSGT00940000157441.c	ENSGT00940000158910.g	ENSGT00950000183147.A.a.g.a.a	ENSGT00940000157776.c.b.b	ENSGT00390000008402.g	ENSGT00940000155823.A.b	ENSGT00940000156723.e	ENSGT00940000153117.B.h	ENSGT00390000012703.b.b #19	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.a	ENSGT00940000159815.d	ENSGT00930000151014.q.f	ENSGT00940000154790.b.a.b.d	ENSGT00940000153433.A.f.a #18	ENSGT00390000012060.d #16	ENSGT00940000155747.g.a.f #15	ENSGT00940000162910.o	ENSGT00390000010925.e.b #12	ENSGT01030000234625.B.d.c.a.e #11	ENSGT00940000155693.a.b.i #8	ENSGT00940000164930.a.b	ENSGT00550000074954.o.a	ENSGT00940000156145	ENSGT00940000156816.b
Coho salmon	MODERN SPECIES	27	GPX2 (ENSOKIG00005017607)	SIPA1L1 (ENSOKIG00005017579)	RGS6 (ENSOKIG00005014387)	DPF3 (ENSOKIG00005014266)	ZFYVE1 (ENSOKIG00005014211)	CHAC1 (ENSOKIG00005014202)	DLL4 (ENSOKIG00005014126)	RASGRP1 (ENSOKIG00005013272)	SYNDIG1L (ENSOKIG00005013235)	VSX2 (ENSOKIG00005013224)	LIN52 (ENSOKIG00005013217)	ENSOKIG00005010085	AREL1 (ENSOKIG00005009508)	fcf1 (ENSOKIG00005009412)	VASH1 (ENSOKIG00005009397) #19	ENSOKIG00005009368 #22	RPS6KL1 (ENSOKIG00005009204)	dlst (ENSOKIG00005008564)	prox2 (ENSOKIG00005008492)	ESRRB (ENSOKIG00005008406) #18	ENSOKIG00005008382	IFT43 (ENSOKIG00005008353) #16	tgfb3 (ENSOKIG00005008335) #15	ENSOKIG00005007642	ERG28 (ENSOKIG00005007555) #12	FLVCR2 (ENSOKIG00005007415) #11	JDP2 (ENSOKIG00005007396) #8	ENSOKIG00005007388	ENSOKIG00005007335	NEK9 (ENSOKIG00005006628)	TTC8 (ENSOKIG00005006478)
Chinook salmon	MODERN SPECIES	45	GPX2 (ENSOTSG00005043953)	SIPA1L1 (ENSOTSG00005043954)	RGS6 (ENSOTSG00005043959)	dpf3 (ENSOTSG00005044035)	ZFYVE1 (ENSOTSG00005044038)	CHAC1 (ENSOTSG00005044077)	DLL4 (ENSOTSG00005044083)	RASGRP1 (ENSOTSG00005044094)	SYNDIG1L (ENSOTSG00005044549)	VSX2 (ENSOTSG00005044550)	lin52 (ENSOTSG00005044551)	ENSOTSG00005013538	AREL1 (ENSOTSG00005013545)	fcf1 (ENSOTSG00005013670)	VASH1 (ENSOTSG00005013673) #19	LRRC74A (ENSOTSG00005013675) #22	ENSOTSG00005013681	dlst (ENSOTSG00005013692)	prox2 (ENSOTSG00005014836)	ENSOTSG00005014837	ESRRB (ENSOTSG00005014839) #18	IFT43 (ENSOTSG00005014935) #16	tgfb3 (ENSOTSG00005015444) #15	ENSOTSG00005015445	ERG28 (ENSOTSG00005016878) #12	FLVCR2 (ENSOTSG00005016880) #11	JDP2 (ENSOTSG00005016882) #8	ENSOTSG00005016883	ENSOTSG00005016885	NEK9 (ENSOTSG00005016900)	ttc8 (ENSOTSG00005016946)
Huchen	MODERN SPECIES	99												ENSHHUG00000008222	AREL1 (ENSHHUG00000008156)	fcf1 (ENSHHUG00000008114)	VASH1 (ENSHHUG00000008100) #19	ENSHHUG00000008049 #22	ENSHHUG00000008036	ENSHHUG00000008035	RPS6KL1 (ENSHHUG00000008012)	dlst (ENSHHUG00000007935)	prox2 (ENSHHUG00000007926)	ESRRB (ENSHHUG00000007905) #18	IFT43 (ENSHHUG00000007892) #16	tgfb3 (ENSHHUG00000007869) #15	ENSHHUG00000007754	ERG28 (ENSHHUG00000007721) #12	FLVCR2 (ENSHHUG00000007499) #11	JDP2 (ENSHHUG00000007492) #8	ENSHHUG00000007491	ENSHHUG00000007461	NEK9 (ENSHHUG00000007375)
Northern pike	MODERN SPECIES	14	DPF3 (ENSELUG00000006215)	ZFYVE1 (ENSELUG00000006256)	CHAC1 (ENSELUG00000006265)	DLL4 (ENSELUG00000006286)	ENSELUG00000006324	RASGRP1 (ENSELUG00000006356)	SYNDIG1L (ENSELUG00000006373)	VSX2 (ENSELUG00000006398)	lin52 (ENSELUG00000006439)	pomt2 (ENSELUG00000006497) #28	ENSELUG00000001595	AREL1 (ENSELUG00000006769)	fcf1 (ENSELUG00000006831)	VASH1 (ENSELUG00000006860) #19	ENSELUG00000006883 #20	LRRC74A (ENSELUG00000006925) #22	RPS6KL1 (ENSELUG00000006942)	dlst (ENSELUG00000006987)	prox2 (ENSELUG00000007022)	ESRRB (ENSELUG00000007077) #18	GPATCH2L (ENSELUG00000000253) #17	ENSELUG00000030364	IFT43 (ENSELUG00000007156) #16	tgfb3 (ENSELUG00000007196) #15	ENSELUG00000007250	ERG28 (ENSELUG00000007282) #12	FLVCR2 (ENSELUG00000007300) #11	JDP2 (ENSELUG00000007321) #8	ENSELUG00000007336	tmed10 (ENSELUG00000032761)	MLH3 (ENSELUG00000007401)
Acanthomorphata	ANCESTRAL SPECIES	7	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Euacanthomorphacea	ANCESTRAL SPECIES	11	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Percomorphaceae	ANCESTRAL SPECIES	13	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Percomorphaceae_B	ANCESTRAL SPECIES	11	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11
Percomorphaceae_C	ANCESTRAL SPECIES	12	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11
Eupercaria	ANCESTRAL SPECIES	9	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Tetraodontidae	ANCESTRAL SPECIES	3	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a	ENSGT00800000124176
Fugu	MODERN SPECIES	11	ZFYVE1 (ENSTRUG00000014994)	RHOV (ENSTRUG00000015031)	CHAC1 (ENSTRUG00000015088)	DLL4 (ENSTRUG00000015093)	ENSTRUG00000015159	RASGRP1 (ENSTRUG00000015165)	SYNDIG1L (ENSTRUG00000015278)	VSX2 (ENSTRUG00000031815)	lin52 (ENSTRUG00000015313)	pomt2 (ENSTRUG00000015326) #28	ENSTRUG00000015358	AREL1 (ENSTRUG00000015404)	fcf1 (ENSTRUG00000015443)	VASH1 (ENSTRUG00000015461) #19	ENSTRUG00000015473 #20	ENSTRUG00000015492 #22	ENSTRUG00000027139	ENSTRUG00000015518	ENSTRUG00000015523	RPS6KL1 (ENSTRUG00000015530)	dlst (ENSTRUG00000018357)	prox2 (ENSTRUG00000023052)	ESRRB (ENSTRUG00000018347) #18	GPATCH2L (ENSTRUG00000018346) #17	IFT43 (ENSTRUG00000018345) #16	tgfb3 (ENSTRUG00000023926) #15	ENSTRUG00000018337	ERG28 (ENSTRUG00000032681) #12	FLVCR2 (ENSTRUG00000018328) #11	JDP2 (ENSTRUG00000029600) #8	ENSTRUG00000018314
Tetraodon	MODERN SPECIES	1	ENSTNIG00000017436	ZFYVE1 (ENSTNIG00000017435)	RHOV (ENSTNIG00000017434)	CHAC1 (ENSTNIG00000017433)	DLL4 (ENSTNIG00000017432)	ENSTNIG00000017431	RASGRP1 (ENSTNIG00000017430)	SYNDIG1L (ENSTNIG00000017429)	VSX2 (ENSTNIG00000017428)	lin52 (ENSTNIG00000017427)	ENSTNIG00000017426	AREL1 (ENSTNIG00000017425)	fcf1 (ENSTNIG00000017424)	VASH1 (ENSTNIG00000017423) #19	ENSTNIG00000017422 #20	LRRC74A (ENSTNIG00000017421) #22	ENSTNIG00000017420	ENSTNIG00000017419	ENSTNIG00000017418	RPS6KL1 (ENSTNIG00000017417)	dlst (ENSTNIG00000017416)	prox2 (ENSTNIG00000017414)	dlst (ENSTNIG00000017415)	ESRRB (ENSTNIG00000017413) #18	GPATCH2L (ENSTNIG00000017412) #17	IFT43 (ENSTNIG00000017411) #16	tgfb3 (ENSTNIG00000017410) #15	ENSTNIG00000017409	ERG28 (ENSTNIG00000017408) #12	FLVCR2 (ENSTNIG00000017407) #11	JDP2 (ENSTNIG00000017406) #8
Eupecaria_A	ANCESTRAL SPECIES	10	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Ballan wrasse	MODERN SPECIES	29	ZFYVE1 (ENSLBEG00000000007)	RHOV (ENSLBEG00000000016)	CHAC1 (ENSLBEG00000000018)	DLL4 (ENSLBEG00000000020)	ENSLBEG00000000022	RASGRP1 (ENSLBEG00000000025)	SYNDIG1L (ENSLBEG00000000039)	VSX2 (ENSLBEG00000000042)	lin52 (ENSLBEG00000000051)	pomt2 (ENSLBEG00000000054) #28	ENSLBEG00000000067	AREL1 (ENSLBEG00000000117)	fcf1 (ENSLBEG00000000146)	VASH1 (ENSLBEG00000000156) #19	ENSLBEG00000000168 #20	LRRC74A (ENSLBEG00000000179) #22	ENSLBEG00000000199	ENSLBEG00000000245	RPS6KL1 (ENSLBEG00000000250)	dlst (ENSLBEG00000000267)	prox2 (ENSLBEG00000000305)	ESRRB (ENSLBEG00000000330) #18	GPATCH2L (ENSLBEG00000000361) #17	IFT43 (ENSLBEG00000000378) #16	tgfb3 (ENSLBEG00000000436) #15	ENSLBEG00000000473	ERG28 (ENSLBEG00000000516) #12	FLVCR2 (ENSLBEG00000000549) #11	ENSLBEG00000000640 #11	JDP2 (ENSLBEG00000000660) #8	ENSLBEG00000000673
Eupecaria_B	ANCESTRAL SPECIES	11	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Perciformes	ANCESTRAL SPECIES	12	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a.d	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000160884	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
Cottioidei	ANCESTRAL SPECIES	8	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a.d	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000160884	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
Lumpfish	MODERN SPECIES	14	ZFYVE1 (ENSCLMG00005015308)	RHOV (ENSCLMG00005015372)	CHAC1 (ENSCLMG00005015374)	DLL4 (ENSCLMG00005015375)	ENSCLMG00005015376	RASGRP1 (ENSCLMG00005015377)	SYNDIG1L (ENSCLMG00005015380)	VSX2 (ENSCLMG00005015381)	lin52 (ENSCLMG00005015384)	pomt2 (ENSCLMG00005015390) #28	ENSCLMG00005015463	ENSCLMG00005015465	fcf1 (ENSCLMG00005015466)	VASH1 (ENSCLMG00005015467) #19	ENSCLMG00005015468 #20	LRRC74A (ENSCLMG00005015469) #22	ENSCLMG00005015470	ENSCLMG00005015471	RPS6KL1 (ENSCLMG00005015472)	dlst (ENSCLMG00005015474)	prox2 (ENSCLMG00005015484)	ESRRB (ENSCLMG00005015485) #18	GPATCH2L (ENSCLMG00005015496) #17	IFT43 (ENSCLMG00005015500) #16	tgfb3 (ENSCLMG00005015502) #15	ENSCLMG00005015505 #13	ENSCLMG00005015507	ERG28 (ENSCLMG00005015509) #12	FLVCR2 (ENSCLMG00005015510) #11	JDP2 (ENSCLMG00005015616) #8	ENSCLMG00005015619
Stickleback	MODERN SPECIES	15	ENSGACG00000007324	ENSGACG00000007326	mgst3b (ENSGACG00000007329)	tmem50a (ENSGACG00000007351)	rhd (ENSGACG00000007369)	maco1b (ENSGACG00000007385)	ldlrap1b (ENSGACG00000007390)	ENSGACG00000007403	FNDC5 (ENSGACG00000007409)	olig4 (ENSGACG00000007415)	bsdc1 (ENSGACG00000007418)	marcksl1a (ENSGACG00000007455)	VASH1 (ENSGACG00000007467) #19	ANGEL1 (ENSGACG00000007487) #20	ENSGACG00000007494	ENSGACG00000007497 #22	RPS6KL1 (ENSGACG00000007502)	dlst (ENSGACG00000007509)	prox2 (ENSGACG00000007538)	ESRRB (ENSGACG00000007542) #18	ENSGACG00000007548 #17	IFT43 (ENSGACG00000007550) #16	tgfb3 (ENSGACG00000007553) #15	ENSGACG00000007580	ERG28 (ENSGACG00000007595) #12	FLVCR2 (ENSGACG00000007602) #11	JDP2 (ENSGACG00000007611) #8	ENSGACG00000007617	ENSGACG00000007623	NEK9 (ENSGACG00000007632)	ENSGACG00000007640
Perciformes_a	ANCESTRAL SPECIES	10	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a.d	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a	ENSGT00800000124176
Pike perch	MODERN SPECIES	5	ZFYVE1 (ENSSLUG00000004213)	RHOV (ENSSLUG00000004357)	CHAC1 (ENSSLUG00000004371)	DLL4 (ENSSLUG00000004389)	ENSSLUG00000004438	RASGRP1 (ENSSLUG00000004480)	SYNDIG1L (ENSSLUG00000004492)	VSX2 (ENSSLUG00000004495)	lin52 (ENSSLUG00000004512)	pomt2 (ENSSLUG00000004563) #28	ENSSLUG00000004819	AREL1 (ENSSLUG00000006502)	fcf1 (ENSSLUG00000006556)	VASH1 (ENSSLUG00000006627) #19	ENSSLUG00000006635 #20	ENSSLUG00000006643 #22	ENSSLUG00000006646	RPS6KL1 (ENSSLUG00000006656)	dlst (ENSSLUG00000006732)	prox2 (ENSSLUG00000007548)	ESRRB (ENSSLUG00000007571) #18	GPATCH2L (ENSSLUG00000007608) #17	ENSSLUG00000007616	IFT43 (ENSSLUG00000007621) #16	tgfb3 (ENSSLUG00000007633) #15	ENSSLUG00000007653	ERG28 (ENSSLUG00000007698) #12	FLVCR2 (ENSSLUG00000007709) #11	JDP2 (ENSSLUG00000007731) #8	ENSSLUG00000007737	ENSSLUG00000007754
Eupecaria_C	ANCESTRAL SPECIES	8	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000177781	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT00940000155693.a.b #8
Gilthead seabream	MODERN SPECIES	7	mtfr1l (ENSSAUG00010003211)	ENSSAUG00010003214	STAC (ENSSAUG00010003217)	ENSSAUG00010003227	nkl.4 (ENSSAUG00010003231)	tonsl (ENSSAUG00010003245)	GABRR1 (ENSSAUG00010003331)	PM20D2 (ENSSAUG00010003462)	CNR1 (ENSSAUG00010003476)	akirin2 (ENSSAUG00010003480)	orc3 (ENSSAUG00010003509)	znf292a (ENSSAUG00010003577)	cga (ENSSAUG00010003582)	VASH1 (ENSSAUG00010003587) #19	ENSSAUG00010003588 #20	LRRC74A (ENSSAUG00010003589) #22	ENSSAUG00010003597	OLFM4 (ENSSAUG00010003603)	RPS6KL1 (ENSSAUG00010003609)	dlst (ENSSAUG00010003627)	prox2 (ENSSAUG00010003934)	ESRRB (ENSSAUG00010003939) #18	GPATCH2L (ENSSAUG00010003952) #17	IFT43 (ENSSAUG00010003957) #16	tgfb3 (ENSSAUG00010003964) #15	ENSSAUG00010003967	ENSSAUG00010003969	ERG28 (ENSSAUG00010003977) #12	FLVCR2 (ENSSAUG00010004003) #11	JDP2 (ENSSAUG00010004723) #8	ENSSAUG00010004727
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	16	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
European seabass	MODERN SPECIES	2	ENSDLAG00005007252	ENSDLAG00005007376	ENSDLAG00005007384	ENSDLAG00005007391	ENSDLAG00005007482	ENSDLAG00005007515	ENSDLAG00005007995	ENSDLAG00005008729	ENSDLAG00005007977	ENSDLAG00005007981	ENSDLAG00005008046 #28	ENSDLAG00005008806	ENSDLAG00005008876	ANGEL1 (ENSDLAG00005008917) #20	VASH1 (ENSDLAG00005008902) #19	ENSDLAG00005008936 #22	ENSDLAG00005008949	ENSDLAG00005008957	ENSDLAG00005008961	RPS6KL1 (ENSDLAG00005008969)	dlst (ENSDLAG00005008982)	prox2 (ENSDLAG00005009097)	ESRRB (ENSDLAG00005009106) #18	GPATCH2L (ENSDLAG00005009129) #17	IFT43 (ENSDLAG00005009135) #16	tgfb3 (ENSDLAG00005028845) #15	ENSDLAG00005009162	ERG28 (ENSDLAG00005034440) #12	FLVCR2 (ENSDLAG00005009385) #11	JDP2 (ENSDLAG00005031903) #8	ENSDLAG00005009432
Large yellow croaker	MODERN SPECIES	495	ZFYVE1 (ENSLCRG00005014486)	RHOV (ENSLCRG00005014484)	CHAC1 (ENSLCRG00005014483)	DLL4 (ENSLCRG00005014476)	ENSLCRG00005014473	RASGRP1 (ENSLCRG00005013562)	SYNDIG1L (ENSLCRG00005017998)	VSX2 (ENSLCRG00005017995)	lin52 (ENSLCRG00005017990)	pomt2 (ENSLCRG00005017660) #28	ENSLCRG00005017517	AREL1 (ENSLCRG00005017515)	fcf1 (ENSLCRG00005017513)	VASH1 (ENSLCRG00005017509) #19	ANGEL1 (ENSLCRG00005017507) #20	LRRC74A (ENSLCRG00005017506) #22	ENSLCRG00005017505	ENSLCRG00005017502	ENSLCRG00005017501	RPS6KL1 (ENSLCRG00005017499)	dlst (ENSLCRG00005017494)	prox2 (ENSLCRG00005017493)	esrrb (ENSLCRG00005017492) #18	GPATCH2L (ENSLCRG00005017489) #17	IFT43 (ENSLCRG00005017486) #16	tgfb3 (ENSLCRG00005017482) #15	ENSLCRG00005017425	ERG28 (ENSLCRG00005017404) #12	FLVCR2 (ENSLCRG00005017394) #11	JDP2 (ENSLCRG00005017390) #8	ENSLCRG00005017379
Percomorphaceae_D	ANCESTRAL SPECIES	10	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Carangaria	ANCESTRAL SPECIES	10	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Pleuronectoidei	ANCESTRAL SPECIES	5	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
Turbot	MODERN SPECIES	8	ENSSMAG00000029816	ENSSMAG00000005523	ENSSMAG00000005519	ENSSMAG00000005500	ENSSMAG00000005417	ENSSMAG00000005402	ENSSMAG00000005480	ENSSMAG00000005393	ENSSMAG00000021892	ENSSMAG00000005328 #28	ENSSMAG00000005224	ENSSMAG00000005159	ENSSMAG00000005119	VASH1 (ENSSMAG00000005107) #19	ENSSMAG00000005086 #20	LRRC74A (ENSSMAG00000005061) #22	RPS6KL1 (ENSSMAG00000024937)	dlst (ENSSMAG00000004993)	prox2 (ENSSMAG00000004975)	ESRRB (ENSSMAG00000004937) #18	GPATCH2L (ENSSMAG00000004907) #17	IFT43 (ENSSMAG00000004865) #16	tgfb3 (ENSSMAG00000004837) #15	ENSSMAG00000004813	ERG28 (ENSSMAG00000031469) #12	FLVCR2 (ENSSMAG00000004773) #11	ENSSMAG00000032870 #11	JDP2 (ENSSMAG00000004762) #8	ENSSMAG00000004752	ENSSMAG00000004726	ENSSMAG00000025652
Tongue sole	MODERN SPECIES		ZFYVE1 (ENSCSEG00000000925)	RHOV (ENSCSEG00000000920)	CHAC1 (ENSCSEG00000000917)	DLL4 (ENSCSEG00000000913)	ENSCSEG00000000904	RASGRP1 (ENSCSEG00000000883)	SYNDIG1L (ENSCSEG00000000876)	VSX2 (ENSCSEG00000000870)	lin52 (ENSCSEG00000000863)	pomt2 (ENSCSEG00000000842) #28	ENSCSEG00000000780	AREL1 (ENSCSEG00000000729)	fcf1 (ENSCSEG00000000721)	VASH1 (ENSCSEG00000000714) #19	ANGEL1 (ENSCSEG00000000707) #20	LRRC74A (ENSCSEG00000000695) #22	ENSCSEG00000000689	OLFM4 (ENSCSEG00000000680)	RPS6KL1 (ENSCSEG00000000673)	dlst (ENSCSEG00000000659)	prox2 (ENSCSEG00000000653)	ESRRB (ENSCSEG00000000639) #18	GPATCH2L (ENSCSEG00000000629) #17	IFT43 (ENSCSEG00000000620) #16	tgfb3 (ENSCSEG00000000606) #15	EML5 (ENSCSEG00000000603)	ttc8 (ENSCSEG00000000589)	ENSCSEG00000000602	ENSCSEG00000000586	ENSCSEG00000000582	NEK9 (ENSCSEG00000000555)
Carangaria_A	ANCESTRAL SPECIES	4	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
Seriola	ANCESTRAL SPECIES	3	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
Greater amberjack	MODERN SPECIES	62	RHOV (ENSSDUG00000004443)	CHAC1 (ENSSDUG00000004434)	DLL4 (ENSSDUG00000004386)	exd1 (ENSSDUG00000004368)	RASGRP1 (ENSSDUG00000004267)	SYNDIG1L (ENSSDUG00000004244)	VSX2 (ENSSDUG00000004216)	lin52 (ENSSDUG00000004193)	pomt2 (ENSSDUG00000004165) #28	ENSSDUG00000004081	AREL1 (ENSSDUG00000004018)	fcf1 (ENSSDUG00000003987)	VASH1 (ENSSDUG00000003966) #19	ENSSDUG00000003948 #20	ENSSDUG00000003931 #20	LRRC74A (ENSSDUG00000003905) #22	ENSSDUG00000003889	OLFM4 (ENSSDUG00000003878)	ENSSDUG00000003867	RPS6KL1 (ENSSDUG00000003829)	dlst (ENSSDUG00000003729)	prox2 (ENSSDUG00000003704)	ESRRB (ENSSDUG00000003682) #18	GPATCH2L (ENSSDUG00000003664) #17	IFT43 (ENSSDUG00000003660) #16	tgfb3 (ENSSDUG00000003655) #15	ENSSDUG00000003617	ERG28 (ENSSDUG00000003602) #12	FLVCR2 (ENSSDUG00000003576) #11	JDP2 (ENSSDUG00000003556) #8	ENSSDUG00000003536
Yellowtail amberjack	MODERN SPECIES	2965	ZFYVE1 (ENSSLDG00000021877)	RHOV (ENSSLDG00000021867)	CHAC1 (ENSSLDG00000021860)	DLL4 (ENSSLDG00000021846)	ENSSLDG00000021803	RASGRP1 (ENSSLDG00000021769)	SYNDIG1L (ENSSLDG00000021763)	VSX2 (ENSSLDG00000021738)	lin52 (ENSSLDG00000021710)	pomt2 (ENSSLDG00000021674) #28	ENSSLDG00000021598	AREL1 (ENSSLDG00000021559)	fcf1 (ENSSLDG00000021535)	VASH1 (ENSSLDG00000021514) #19	ANGEL1 (ENSSLDG00000021499) #20	LRRC74A (ENSSLDG00000021472) #22	ENSSLDG00000021462	OLFM4 (ENSSLDG00000021454)	ENSSLDG00000021445	RPS6KL1 (ENSSLDG00000021428)	dlst (ENSSLDG00000021344)	prox2 (ENSSLDG00000021320)	ESRRB (ENSSLDG00000021283) #18	GPATCH2L (ENSSLDG00000021264) #17	IFT43 (ENSSLDG00000021252) #16	tgfb3 (ENSSLDG00000021239) #15	ENSSLDG00000021195	ERG28 (ENSSLDG00000021171) #12	FLVCR2 (ENSSLDG00000021129) #11	JDP2 (ENSSLDG00000021117) #8	ENSSLDG00000021099
Barramundi perch	MODERN SPECIES	110	RHOV (ENSLCAG00010019418)	CHAC1 (ENSLCAG00010019420)	DLL4 (ENSLCAG00010019424)	exd1 (ENSLCAG00010019426)	RASGRP1 (ENSLCAG00010019443)	SYNDIG1L (ENSLCAG00010019503)	VSX2 (ENSLCAG00010019505)	lin52 (ENSLCAG00010019518)	pomt2 (ENSLCAG00010019551) #28	ENSLCAG00010019591	ENSLCAG00010019600	AREL1 (ENSLCAG00010019609)	fcf1 (ENSLCAG00010019630)	VASH1 (ENSLCAG00010019636) #19	ENSLCAG00010019644 #20	LRRC74A (ENSLCAG00010019651) #22	ENSLCAG00010019662	RPS6KL1 (ENSLCAG00010019672)	dlst (ENSLCAG00010019684)	prox2 (ENSLCAG00010019720)	ESRRB (ENSLCAG00010019726) #18	GPATCH2L (ENSLCAG00010019744) #17	IFT43 (ENSLCAG00010019754) #16	tgfb3 (ENSLCAG00010019758) #15	ENSLCAG00010019793	ERG28 (ENSLCAG00010019950) #12	FLVCR2 (ENSLCAG00010019962) #11	JDP2 (ENSLCAG00010019974) #8	ENSLCAG00010019980	ENSLCAG00010019998	ENSLCAG00010020028
Anabantaria	ANCESTRAL SPECIES	10	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Anabantoidei	ANCESTRAL SPECIES	9	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Climbing perch	MODERN SPECIES	3	ENSATEG00000002697	ENSATEG00000002649	ENSATEG00000002642	ENSATEG00000002635	ENSATEG00000002623	ENSATEG00000002558	ENSATEG00000002539	ENSATEG00000002512	ENSATEG00000002481	ENSATEG00000002391 #28	ENSATEG00000002354	ENSATEG00000002276	ENSATEG00000001909	VASH1 (ENSATEG00000001867) #19	ENSATEG00000001862 #20	LRRC74A (ENSATEG00000001794) #22	ENSATEG00000001742	ENSATEG00000001674	ENSATEG00000029867	RPS6KL1 (ENSATEG00000001668)	dlst (ENSATEG00000001662)	prox2 (ENSATEG00000001654)	ESRRB (ENSATEG00000001610) #18	GPATCH2L (ENSATEG00000001600) #17	tgfb3 (ENSATEG00000006139) #15	IFT43 (ENSATEG00000001549) #16	tgfb3 (ENSATEG00000001502) #15	ENSATEG00000001482	ERG28 (ENSATEG00000001439) #12	FLVCR2 (ENSATEG00000001418) #11	ENSATEG00000001397 #11
Zig-zag eel	MODERN SPECIES	14	ENSMAMG00000006662	ENSMAMG00000027226	ENSMAMG00000006619	ENSMAMG00000006592	ENSMAMG00000006523	ENSMAMG00000006513	ENSMAMG00000006491	ENSMAMG00000028234	ENSMAMG00000006480	ENSMAMG00000006414 #28	ENSMAMG00000006387	ENSMAMG00000006325	ENSMAMG00000027976	VASH1 (ENSMAMG00000006273) #19	ENSMAMG00000006257 #20	ENSMAMG00000026118 #22	ENSMAMG00000006205	ENSMAMG00000006200	ENSMAMG00000006115	RPS6KL1 (ENSMAMG00000006095)	dlst (ENSMAMG00000025145)	prox2 (ENSMAMG00000006036)	ESRRB (ENSMAMG00000006014) #18	GPATCH2L (ENSMAMG00000005997) #17	IFT43 (ENSMAMG00000005983) #16	tgfb3 (ENSMAMG00000005975) #15	ENSMAMG00000005926	ERG28 (ENSMAMG00000027458) #12	ENSMAMG00000027957 #11	FLVCR2 (ENSMAMG00000005852) #11	JDP2 (ENSMAMG00000005831) #8
Ovalentaria	ANCESTRAL SPECIES	10	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11
Atherinomorphae	ANCESTRAL SPECIES	11	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Cyprinodontiformes	ANCESTRAL SPECIES	23	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000177781	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Aplocheiloidei	ANCESTRAL SPECIES	15	ENSGT00940000155070.a.a	ENSGT00390000016097.d	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000155454.w.a.b	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
Mangrove rivulus	MODERN SPECIES	1	ENSKMAG00000001479	ZFYVE1 (ENSKMAG00000001500)	CHAC1 (ENSKMAG00000001560)	DLL4 (ENSKMAG00000001564)	ENSKMAG00000001584	RASGRP1 (ENSKMAG00000001590)	SYNDIG1L (ENSKMAG00000001700)	VSX2 (ENSKMAG00000001713)	lin52 (ENSKMAG00000001747)	pomt2 (ENSKMAG00000001785) #28	ENSKMAG00000001909	AREL1 (ENSKMAG00000001949)	fcf1 (ENSKMAG00000002055)	VASH1 (ENSKMAG00000002085) #19	ANGEL1 (ENSKMAG00000002129) #20	LRRC74A (ENSKMAG00000002140) #22	ENSKMAG00000002196	ENSKMAG00000002205	ENSKMAG00000002222	RPS6KL1 (ENSKMAG00000002235)	dlst (ENSKMAG00000002252)	prox2 (ENSKMAG00000002267)	ESRRB (ENSKMAG00000002284) #18	GPATCH2L (ENSKMAG00000002351) #17	IFT43 (ENSKMAG00000002368) #16	tgfb3 (ENSKMAG00000002413) #15	ENSKMAG00000002437	ERG28 (ENSKMAG00000002483) #12	FLVCR2 (ENSKMAG00000002511) #11	JDP2 (ENSKMAG00000002558) #8	ENSKMAG00000002599
Turquoise killifish	MODERN SPECIES	1625	DPF3 (ENSNFUG00015017895)	ZFYVE1 (ENSNFUG00015017881)	CHAC1 (ENSNFUG00015017851)	DLL4 (ENSNFUG00015017304)	ENSNFUG00015017266	RASGRP1 (ENSNFUG00015016706)	ENSNFUG00015016686	SYNDIG1L (ENSNFUG00015016681)	VSX2 (ENSNFUG00015016673)	lin52 (ENSNFUG00015016654)	ENSNFUG00015013154	KIAA0317 (ENSNFUG00015013027)	fcf1 (ENSNFUG00015013013)	VASH1 (ENSNFUG00015013003) #19	ANGEL1 (ENSNFUG00015012994) #20	ENSNFUG00015012991 #22	HSD17B8 (ENSNFUG00015012901)	RPS6KL1 (ENSNFUG00015012869)	DLST (ENSNFUG00015012758)	prox2 (ENSNFUG00015012731)	ESRRB (ENSNFUG00015012693) #18	GPATCH2L (ENSNFUG00015012681) #17	IFT43 (ENSNFUG00015012668) #16	TGFB3 (ENSNFUG00015012658) #15	ENSNFUG00015012630	ERG28 (ENSNFUG00015012618) #12	FLVCR2 (ENSNFUG00015012556) #11	JDP2 (ENSNFUG00015012547) #8	ENSNFUG00015012380	ENSNFUG00015022229	ENSNFUG00015022220
Cyprinodontoidei	ANCESTRAL SPECIES	8	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000177781	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
NAME_4	ANCESTRAL SPECIES	18	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000177781	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
Mummichog	MODERN SPECIES	238						RASGRP1 (ENSFHEG00000018250)	SYNDIG1L (ENSFHEG00000018221)	VSX2 (ENSFHEG00000018218)	lin52 (ENSFHEG00000018202)	pomt2 (ENSFHEG00000018178) #28	ENSFHEG00000018158	AREL1 (ENSFHEG00000018065)	fcf1 (ENSFHEG00000017969)	VASH1 (ENSFHEG00000017957) #19	ANGEL1 (ENSFHEG00000017936) #20	LRRC74A (ENSFHEG00000017929) #22	RPS6KL1 (ENSFHEG00000017899)	dlst (ENSFHEG00000017867)	prox2 (ENSFHEG00000017751)	ESRRB (ENSFHEG00000017738) #18	GPATCH2L (ENSFHEG00000017690) #17	IFT43 (ENSFHEG00000017684) #16	tgfb3 (ENSFHEG00000017672) #15	ENSFHEG00000017664	ERG28 (ENSFHEG00000017643) #12	FLVCR2 (ENSFHEG00000017615) #11	JDP2 (ENSFHEG00000017589) #8	ENSFHEG00000017575	ENSFHEG00000017558	NEK9 (ENSFHEG00000017544)	ENSFHEG00000017470
Sheepshead minnow	MODERN SPECIES	490															ANGEL1 (ENSCVAG00000022214) #20	ENSCVAG00000022255 #22	ENSCVAG00000022263	ENSCVAG00000022271	RPS6KL1 (ENSCVAG00000022286)	dlst (ENSCVAG00000022292)	prox2 (ENSCVAG00000022322)	ESRRB (ENSCVAG00000022357) #18	GPATCH2L (ENSCVAG00000022365) #17	IFT43 (ENSCVAG00000022374) #16	tgfb3 (ENSCVAG00000000577) #15	ENSCVAG00000022394	ENSCVAG00000022405	ERG28 (ENSCVAG00000022413) #12	FLVCR2 (ENSCVAG00000022444) #11	JDP2 (ENSCVAG00000022457) #8	ENSCVAG00000022477
Poeciliinae	ANCESTRAL SPECIES	8	ENSGT00940000155070.a.a	ENSGT00390000016097.d	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a	ENSGT00800000124176
Poecilia	ANCESTRAL SPECIES	10	ENSGT00940000155070.a.a	ENSGT00390000016097.d	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a	ENSGT00800000124176
NAME_6	ANCESTRAL SPECIES	6	ENSGT00940000155070.a.a	ENSGT00390000016097.d	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a	ENSGT00800000124176
Amazon molly	MODERN SPECIES	282	ENSPFOG00000013496	ZFYVE1 (ENSPFOG00000013557)	CHAC1 (ENSPFOG00000013607)	DLL4 (ENSPFOG00000013633)	ENSPFOG00000013673	RASGRP1 (ENSPFOG00000013684)	SYNDIG1L (ENSPFOG00000013763)	VSX2 (ENSPFOG00000013794)	lin52 (ENSPFOG00000013824)	pomt2 (ENSPFOG00000013840) #28	ENSPFOG00000013992	AREL1 (ENSPFOG00000014094)	fcf1 (ENSPFOG00000014171)	VASH1 (ENSPFOG00000014215) #19	ANGEL1 (ENSPFOG00000014241) #20	LRRC74A (ENSPFOG00000014267) #22	ENSPFOG00000014372	ENSPFOG00000014381	RPS6KL1 (ENSPFOG00000014419)	dlst (ENSPFOG00000014514)	prox2 (ENSPFOG00000014635)	ESRRB (ENSPFOG00000014654) #18	GPATCH2L (ENSPFOG00000014687) #17	IFT43 (ENSPFOG00000014703) #16	tgfb3 (ENSPFOG00000014756) #15	ENSPFOG00000014806	ERG28 (ENSPFOG00000014865) #12	FLVCR2 (ENSPFOG00000014890) #11	JDP2 (ENSPFOG00000015014) #8	ENSPFOG00000015030	ENSPFOG00000015041
Sailfin molly	MODERN SPECIES	43	ENSPLAG00000014368	ZFYVE1 (ENSPLAG00000014358)	CHAC1 (ENSPLAG00000014324)	DLL4 (ENSPLAG00000014313)	ENSPLAG00000014262	RASGRP1 (ENSPLAG00000014253)	SYNDIG1L (ENSPLAG00000014219)	VSX2 (ENSPLAG00000014209)	lin52 (ENSPLAG00000014183)	pomt2 (ENSPLAG00000014176) #28	ENSPLAG00000000328	AREL1 (ENSPLAG00000013735)	fcf1 (ENSPLAG00000013654)	VASH1 (ENSPLAG00000013640) #19	ANGEL1 (ENSPLAG00000013616) #20	LRRC74A (ENSPLAG00000013607) #22	ENSPLAG00000000518	ENSPLAG00000013565	RPS6KL1 (ENSPLAG00000013549)	dlst (ENSPLAG00000013512)	prox2 (ENSPLAG00000013452)	ESRRB (ENSPLAG00000013431) #18
Guppy	MODERN SPECIES	453	ENSPREG00000019549	ZFYVE1 (ENSPREG00000019523)	CHAC1 (ENSPREG00000019508)	DLL4 (ENSPREG00000019494)	ENSPREG00000019468	RASGRP1 (ENSPREG00000019440)	SYNDIG1L (ENSPREG00000019429)	VSX2 (ENSPREG00000019401)	lin52 (ENSPREG00000019382)	pomt2 (ENSPREG00000019362) #28	ENSPREG00000019317	AREL1 (ENSPREG00000019261)	fcf1 (ENSPREG00000019245)	VASH1 (ENSPREG00000019216) #19	ENSPREG00000019202 #20	LRRC74A (ENSPREG00000019186) #22	ENSPREG00000019175	fbln5 (ENSPREG00000019143)	trip11 (ENSPREG00000019125)	golga5 (ENSPREG00000019079)	rtf1 (ENSPREG00000018936)	ndufaf1 (ENSPREG00000018889)	nusap1 (ENSPREG00000018850)	chp1 (ENSPREG00000018833)	lgmn (ENSPREG00000018800)	PCNX1 (ENSPREG00000018597)	med6 (ENSPREG00000018553)	TTC9 (ENSPREG00000018540)	MAP3K9 (ENSPREG00000018522)	slc8a3 (ENSPREG00000018497)	cox16 (ENSPREG00000018475)
Platyfish	MODERN SPECIES	10	ENSXMAG00000026177	ZFYVE1 (ENSXMAG00000014436)	CHAC1 (ENSXMAG00000014444)	DLL4 (ENSXMAG00000014449)	ENSXMAG00000014462	RASGRP1 (ENSXMAG00000014464)	SYNDIG1L (ENSXMAG00000014483)	VSX2 (ENSXMAG00000014488)	lin52 (ENSXMAG00000028873)	pomt2 (ENSXMAG00000014515) #28	ENSXMAG00000014546	AREL1 (ENSXMAG00000014558)	fcf1 (ENSXMAG00000014576)	VASH1 (ENSXMAG00000027602) #19	ANGEL1 (ENSXMAG00000014605) #20	LRRC74A (ENSXMAG00000014608) #22	ENSXMAG00000014617	ENSXMAG00000014621	RPS6KL1 (ENSXMAG00000014631)	dlst (ENSXMAG00000014638)	prox2 (ENSXMAG00000014663)	ESRRB (ENSXMAG00000014672) #18	GPATCH2L (ENSXMAG00000029501) #17	IFT43 (ENSXMAG00000014700) #16	tgfb3 (ENSXMAG00000014713) #15	ENSXMAG00000014737	ERG28 (ENSXMAG00000014769) #12	FLVCR2 (ENSXMAG00000026309) #11	JDP2 (ENSXMAG00000014805) #8	ENSXMAG00000021870	ENSXMAG00000014821
Oryzias	ANCESTRAL SPECIES	3	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a	ENSGT00800000124176	ENSGT00390000011103.B
Oryzias_b	ANCESTRAL SPECIES	12	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a	ENSGT00800000124176	ENSGT00390000011103.B
Javanese ricefish	MODERN SPECIES	14	ZFYVE1 (ENSOJAG00000022613)	RHOV (ENSOJAG00000022644)	CHAC1 (ENSOJAG00000022656)	DLL4 (ENSOJAG00000022660)	ENSOJAG00000022663	RASGRP1 (ENSOJAG00000022679)	SYNDIG1L (ENSOJAG00000022733)	VSX2 (ENSOJAG00000022737)	lin52 (ENSOJAG00000022746)	pomt2 (ENSOJAG00000022767) #28	ENSOJAG00000022828	AREL1 (ENSOJAG00000022865)	fcf1 (ENSOJAG00000022882)	VASH1 (ENSOJAG00000022899) #19	ANGEL1 (ENSOJAG00000022907) #20	LRRC74A (ENSOJAG00000022909) #22	RPS6KL1 (ENSOJAG00000022916)	dlst (ENSOJAG00000003574)	prox2 (ENSOJAG00000003608)	ESRRB (ENSOJAG00000003699) #18	GPATCH2L (ENSOJAG00000003875) #17	IFT43 (ENSOJAG00000003918) #16	tgfb3 (ENSOJAG00000003928) #15	ENSOJAG00000003950	ERG28 (ENSOJAG00000004081) #12	FLVCR2 (ENSOJAG00000004190) #11	JDP2 (ENSOJAG00000004690) #8	ENSOJAG00000004732	ENSOJAG00000004920	ENSOJAG00000004937	NEK9 (ENSOJAG00000004956)
Indian medaka	MODERN SPECIES		ENSOMEG00000019672	ZFYVE1 (ENSOMEG00000019720)	RHOV (ENSOMEG00000019747)	CHAC1 (ENSOMEG00000019760)	DLL4 (ENSOMEG00000019789)	ENSOMEG00000019812	RASGRP1 (ENSOMEG00000019846)	SYNDIG1L (ENSOMEG00000019872)	VSX2 (ENSOMEG00000019891)	lin52 (ENSOMEG00000019952)	pomt2 (ENSOMEG00000020029) #28	ENSOMEG00000020182	AREL1 (ENSOMEG00000020268)	fcf1 (ENSOMEG00000020323)	VASH1 (ENSOMEG00000020341) #19	LRRC74A (ENSOMEG00000020376) #22	ANGEL1 (ENSOMEG00000020430) #20	RPS6KL1 (ENSOMEG00000020459)	dlst (ENSOMEG00000020530)	prox2 (ENSOMEG00000020556)	ESRRB (ENSOMEG00000020638) #18	GPATCH2L (ENSOMEG00000020697) #17	IFT43 (ENSOMEG00000020751) #16	tgfb3 (ENSOMEG00000020809) #15	ENSOMEG00000020840 #13	ENSOMEG00000020849	ERG28 (ENSOMEG00000020883) #12	FLVCR2 (ENSOMEG00000020912) #11	JDP2 (ENSOMEG00000020954) #8	ENSOMEG00000020995	ENSOMEG00000021076
Oryzias_a	ANCESTRAL SPECIES	11	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a	ENSGT00800000124176	ENSGT00390000011103.B	ENSGT00940000156145
Chinese medaka	MODERN SPECIES	1096	RGS6 (ENSOSIG00000009820)	ENSOSIG00000009921	ZFYVE1 (ENSOSIG00000009924)	RHOV (ENSOSIG00000009991)	CHAC1 (ENSOSIG00000009993)	DLL4 (ENSOSIG00000009996)	ENSOSIG00000009997	RASGRP1 (ENSOSIG00000010025)	SYNDIG1L (ENSOSIG00000012397)	VSX2 (ENSOSIG00000012399)	ENSOSIG00000012422	AREL1 (ENSOSIG00000012629)	fcf1 (ENSOSIG00000012934)	VASH1 (ENSOSIG00000012937) #19	ENSOSIG00000012940 #20	LRRC74A (ENSOSIG00000012942) #22	RPS6KL1 (ENSOSIG00000012945)	dlst (ENSOSIG00000012955)	prox2 (ENSOSIG00000013356)	ESRRB (ENSOSIG00000013361) #18	GPATCH2L (ENSOSIG00000013463) #17	IFT43 (ENSOSIG00000013464) #16	tgfb3 (ENSOSIG00000013465) #15	ENSOSIG00000013468	ERG28 (ENSOSIG00000013481) #12	FLVCR2 (ENSOSIG00000013497) #11	JDP2 (ENSOSIG00000013538) #8	ENSOSIG00000013541	ENSOSIG00000013543	ENSOSIG00000013622	ENSOSIG00000013624
Japanese Medaka HdrR	MODERN SPECIES	14	ZFYVE1 (ENSORLG00000016756)	ENSORLG00000016749	ENSORLG00000027227	ENSORLG00000016743	ENSORLG00000026344	RASGRP1 (ENSORLG00000016723)	SYNDIG1L (ENSORLG00000016699)	vsx2 (ENSORLG00000016694)	lin52 (ENSORLG00000028910)	pomt2 (ENSORLG00000027928) #28	ENSORLG00000016691	AREL1 (ENSORLG00000016669)	fcf1 (ENSORLG00000016654)	VASH1 (ENSORLG00000016648) #19	ENSORLG00000016639 #20	LRRC74A (ENSORLG00000016633) #22	RPS6KL1 (ENSORLG00000016629)	dlst (ENSORLG00000016623)	prox2 (ENSORLG00000016587)	esrrb (ENSORLG00000016581) #18	GPATCH2L (ENSORLG00000022664) #17	IFT43 (ENSORLG00000016572) #16	tgfb3 (ENSORLG00000016565) #15	ENSORLG00000024651	ERG28 (ENSORLG00000016527) #12	FLVCR2 (ENSORLG00000016522) #11	JDP2 (ENSORLG00000029498) #8	ENSORLG00000016509	ENSORLG00000016499	ENSORLG00000028769	NEK9 (ENSORLG00000016466)
Ovalentaria_B	ANCESTRAL SPECIES	18	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Pomacentridae	ANCESTRAL SPECIES	19								ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a.h #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
Pomacentridae_A	ANCESTRAL SPECIES	19								ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a.h #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
Amphiprion	ANCESTRAL SPECIES	217								ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a.g #15
Clown anemonefish	MODERN SPECIES	1630								VSX2 (ENSAOCG00000003832)	lin52 (ENSAOCG00000003827)	pomt2 (ENSAOCG00000003815) #28	ENSAOCG00000003791	AREL1 (ENSAOCG00000003767)	fcf1 (ENSAOCG00000003752)	VASH1 (ENSAOCG00000003746) #19	ANGEL1 (ENSAOCG00000003735) #20	LRRC74A (ENSAOCG00000003723) #22	ENSAOCG00000003710	ENSAOCG00000003698	RPS6KL1 (ENSAOCG00000003693)	dlst (ENSAOCG00000000101)	prox2 (ENSAOCG00000003662)	ESRRB (ENSAOCG00000003628) #18
Orange clownfish	MODERN SPECIES	9	ENSAPEG00000011169	vsnl1b (ENSAPEG00000011192)	ENSAPEG00000011204	SCML4 (ENSAPEG00000011212)	afg1la (ENSAPEG00000011237)	ENSAPEG00000011312	VSX2 (ENSAPEG00000011328)	lin52 (ENSAPEG00000011363)	pomt2 (ENSAPEG00000011391) #28	ENSAPEG00000011435	AREL1 (ENSAPEG00000011561)	fcf1 (ENSAPEG00000011644)	VASH1 (ENSAPEG00000011666) #19	ENSAPEG00000011693 #20	ENSAPEG00000011734 #20	LRRC74A (ENSAPEG00000011761) #22	ENSAPEG00000011845	OLFM4 (ENSAPEG00000012141)	RPS6KL1 (ENSAPEG00000012162)	dlst (ENSAPEG00000012182)	prox2 (ENSAPEG00000012200)	ESRRB (ENSAPEG00000012314) #18	GPATCH2L (ENSAPEG00000012331) #17	IFT43 (ENSAPEG00000012334) #16	cfl2 (ENSAPEG00000012418)	BAZ1A (ENSAPEG00000012434)	zgc:109986 (ENSAPEG00000012482)	slc3a2b (ENSAPEG00000012493)	ENSAPEG00000012506	ENSAPEG00000012525	MDGA2 (ENSAPEG00000012549)
Spiny chromis	MODERN SPECIES	1198								VSX2 (ENSAPOG00000010907)	lin52 (ENSAPOG00000010878)	pomt2 (ENSAPOG00000010850) #28	ENSAPOG00000010780	AREL1 (ENSAPOG00000010535)	fcf1 (ENSAPOG00000010473)	VASH1 (ENSAPOG00000010465) #19	ANGEL1 (ENSAPOG00000010431) #20	LRRC74A (ENSAPOG00000010406) #22
Bicolor damselfish	MODERN SPECIES	244							ENSSPAG00000008801	lin52 (ENSSPAG00000008856)	ENSSPAG00000008900	pomt2 (ENSSPAG00000008910) #28	ENSSPAG00000008972	AREL1 (ENSSPAG00000009033)	fcf1 (ENSSPAG00000009082)	VASH1 (ENSSPAG00000009098) #19	ENSSPAG00000009116 #20	LRRC74A (ENSSPAG00000009128) #22	ENSSPAG00000009151	ENSSPAG00000009174	RPS6KL1 (ENSSPAG00000009189)	dlst (ENSSPAG00000009222)	prox2 (ENSSPAG00000009278)	ESRRB (ENSSPAG00000009297) #18	GPATCH2L (ENSSPAG00000009339) #17	IFT43 (ENSSPAG00000009354) #16	tgfb3 (ENSSPAG00000009377) #15	ENSSPAG00000009413 #13	ENSSPAG00000009438	ERG28 (ENSSPAG00000009448) #12	FLVCR2 (ENSSPAG00000009467) #11	ENSSPAG00000009505 #8	ENSSPAG00000009516
Cichlidae	ANCESTRAL SPECIES	22	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000177781	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Pseudocrenilabrinae	ANCESTRAL SPECIES	8	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000177781	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	6	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000177781	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Haplochromini	ANCESTRAL SPECIES	7	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000177781	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Burton s mouthbrooder	MODERN SPECIES	285	ENSHBUG00000017752	ZFYVE1 (ENSHBUG00000017796)	RHOV (ENSHBUG00000017837)	CHAC1 (ENSHBUG00000017846)	DLL4 (ENSHBUG00000017868)	ENSHBUG00000017880	RASGRP1 (ENSHBUG00000017933)	SYNDIG1L (ENSHBUG00000017943)	VSX2 (ENSHBUG00000001141)	pomt2 (ENSHBUG00000018055) #28	ENSHBUG00000018109	AREL1 (ENSHBUG00000018198)	fcf1 (ENSHBUG00000018274)	VASH1 (ENSHBUG00000018300) #19	ENSHBUG00000018316 #20	LRRC74A (ENSHBUG00000018359) #22	ENSHBUG00000000936	RPS6KL1 (ENSHBUG00000018411)	dlst (ENSHBUG00000018444)	prox2 (ENSHBUG00000018457)	ESRRB (ENSHBUG00000018505) #18	GPATCH2L (ENSHBUG00000018530) #17	IFT43 (ENSHBUG00000018591) #16	tgfb3 (ENSHBUG00000018621) #15	ENSHBUG00000018667	ERG28 (ENSHBUG00000018687) #12	FLVCR2 (ENSHBUG00000018722) #11	JDP2 (ENSHBUG00000018738) #8	ENSHBUG00000018749	MLH3 (ENSHBUG00000018766)	ENSHBUG00000018771
Haplochromini_A	ANCESTRAL SPECIES	7	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000177781	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
P. nyererei	MODERN SPECIES	418	RGS6 (ENSPNYG00000022019)	ENSPNYG00000022003	ZFYVE1 (ENSPNYG00000021985)	RHOV (ENSPNYG00000021973)	CHAC1 (ENSPNYG00000021956)	DLL4 (ENSPNYG00000021942)	RASGRP1 (ENSPNYG00000021932)	SYNDIG1L (ENSPNYG00000021925)	VSX2 (ENSPNYG00000021915)	lin52 (ENSPNYG00000021909)	pomt2 (ENSPNYG00000021894) #28	ENSPNYG00000021871	AREL1 (ENSPNYG00000021830)	VASH1 (ENSPNYG00000021780) #19	ENSPNYG00000021751 #20	LRRC74A (ENSPNYG00000021737) #22	ENSPNYG00000021684	ENSPNYG00000021673	RPS6KL1 (ENSPNYG00000021655)	dlst (ENSPNYG00000021627)	prox2 (ENSPNYG00000021606)	ESRRB (ENSPNYG00000021595) #18	GPATCH2L (ENSPNYG00000021578) #17	IFT43 (ENSPNYG00000021561) #16	tgfb3 (ENSPNYG00000021547) #15	ENSPNYG00000021536	ENSPNYG00000021526	ERG28 (ENSPNYG00000021518) #12	FLVCR2 (ENSPNYG00000021487) #11	JDP2 (ENSPNYG00000021474) #8	ENSPNYG00000021461
Haplochromini_B	ANCESTRAL SPECIES	13	ENSGT00390000016097.d	ENSGT00940000157624.b	ENSGT00390000003855.b.e.a	ENSGT00940000157441	ENSGT00390000003581	ENSGT00940000158910	ENSGT00950000183147.A.a.g.a	ENSGT00940000157776.c.b	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000155823.A	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000177781	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
Eastern happy	MODERN SPECIES	10	RHOV (ENSACLG00000001410)	CHAC1 (ENSACLG00000001404)	DLL4 (ENSACLG00000001366)	ENSACLG00000001361	RASGRP1 (ENSACLG00000001290)	SYNDIG1L (ENSACLG00000001275)	ENSACLG00000001267	VSX2 (ENSACLG00000001260)	lin52 (ENSACLG00000001244)	pomt2 (ENSACLG00000001122) #28	ENSACLG00000001019	AREL1 (ENSACLG00000024896)	fcf1 (ENSACLG00000024887)	VASH1 (ENSACLG00000024881) #19	ENSACLG00000024873 #20	LRRC74A (ENSACLG00000024864) #22	ENSACLG00000024855	ENSACLG00000024844	RPS6KL1 (ENSACLG00000024821)	dlst (ENSACLG00000024780)	prox2 (ENSACLG00000024761)	ESRRB (ENSACLG00000024711) #18	GPATCH2L (ENSACLG00000024682) #17	IFT43 (ENSACLG00000024588) #16	tgfb3 (ENSACLG00000024559) #15	ENSACLG00000024537	ENSACLG00000024531	ERG28 (ENSACLG00000024499) #12	FLVCR2 (ENSACLG00000024486) #11	JDP2 (ENSACLG00000024478) #8	ENSACLG00000024472
Zebra mbuna	MODERN SPECIES	1101	ZFYVE1 (ENSMZEG00005009280)	RHOV (ENSMZEG00005009233)	CHAC1 (ENSMZEG00005009219)	DLL4 (ENSMZEG00005009206)	ENSMZEG00005009193	RASGRP1 (ENSMZEG00005009169)	SYNDIG1L (ENSMZEG00005009158)	VSX2 (ENSMZEG00005009147)	lin52 (ENSMZEG00005009129)	pomt2 (ENSMZEG00005009066) #28	ENSMZEG00005008862	AREL1 (ENSMZEG00005008787)	fcf1 (ENSMZEG00005008754)	VASH1 (ENSMZEG00005008728) #19	ENSMZEG00005008711 #20	LRRC74A (ENSMZEG00005008679) #22	ENSMZEG00005008667	ENSMZEG00005008650	ENSMZEG00005008603	dlst (ENSMZEG00005008555)	prox2 (ENSMZEG00005008537)	ENSMZEG00005008526	TMEM179 (ENSMZEG00005008507)	ENSMZEG00005008499	UBR1 (ENSMZEG00005008471)	atxn3 (ENSMZEG00005008446)	ENSMZEG00005008427	DDX24 (ENSMZEG00005008402)	OTUB2 (ENSMZEG00005008416)	asb2b (ENSMZEG00005008387)	PRIMA1 (ENSMZEG00005008375)
Lyretail cichlid	MODERN SPECIES	299	ZFYVE1 (ENSNBRG00000003027)	RHOV (ENSNBRG00000003078)	CHAC1 (ENSNBRG00000003133)	DLL4 (ENSNBRG00000003206)	ENSNBRG00000003229	RASGRP1 (ENSNBRG00000003262)	SYNDIG1L (ENSNBRG00000003300)	VSX2 (ENSNBRG00000003320)	lin52 (ENSNBRG00000003345)	pomt2 (ENSNBRG00000003366) #28	ENSNBRG00000003459	AREL1 (ENSNBRG00000003554)	fcf1 (ENSNBRG00000003622)	VASH1 (ENSNBRG00000003644) #19	ENSNBRG00000003668 #20	LRRC74A (ENSNBRG00000003682) #22	ENSNBRG00000003725	RPS6KL1 (ENSNBRG00000003742)	ENSNBRG00000003784	dlst (ENSNBRG00000003806)	prox2 (ENSNBRG00000003860)	ESRRB (ENSNBRG00000003887) #18	GPATCH2L (ENSNBRG00000003911) #17	IFT43 (ENSNBRG00000003925) #16	tgfb3 (ENSNBRG00000003946) #15	ENSNBRG00000003977	ENSNBRG00000004002	ENSNBRG00000004022	ERG28 (ENSNBRG00000004037) #12	FLVCR2 (ENSNBRG00000004058) #11	ENSNBRG00000004097 #11
Nile tilapia	MODERN SPECIES	10	CHAC1 (ENSONIG00000012055)	DLL4 (ENSONIG00000012045)	ENSONIG00000012043	RASGRP1 (ENSONIG00000012037)	SYNDIG1L (ENSONIG00000032174)	VSX2 (ENSONIG00000012035)	lin52 (ENSONIG00000034628)	pomt2 (ENSONIG00000012033) #28	ENSONIG00000012026	AREL1 (ENSONIG00000012024)	fcf1 (ENSONIG00000012020)	VASH1 (ENSONIG00000012019) #19	ENSONIG00000012018 #20	ENSONIG00000039869	ENSONIG00000027448	ENSONIG00000031391 #22	ENSONIG00000020197	ENSONIG00000020196	RPS6KL1 (ENSONIG00000020195)	dlst (ENSONIG00000020194)	prox2 (ENSONIG00000020193)	ESRRB (ENSONIG00000020192) #18	GPATCH2L (ENSONIG00000020191) #17	IFT43 (ENSONIG00000037253) #16	tgfb3 (ENSONIG00000020190) #15	ENSONIG00000020189	ERG28 (ENSONIG00000020188) #12	FLVCR2 (ENSONIG00000020187) #11	JDP2 (ENSONIG00000020186) #8	ENSONIG00000020185	MLH3 (ENSONIG00000020184)
Midas cichlid	MODERN SPECIES	150	ZFYVE1 (ENSACIG00000009103)	RHOV (ENSACIG00000009084)	CHAC1 (ENSACIG00000009072)	DLL4 (ENSACIG00000009017)	ENSACIG00000008996	RASGRP1 (ENSACIG00000008925)	SYNDIG1L (ENSACIG00000008914)	VSX2 (ENSACIG00000008897)	lin52 (ENSACIG00000008882)	pomt2 (ENSACIG00000008827) #28	LTBP2 (ENSACIG00000008750)	AREL1 (ENSACIG00000008708)	fcf1 (ENSACIG00000008461)	VASH1 (ENSACIG00000008409) #19	ANGEL1 (ENSACIG00000008392) #20	LRRC74A (ENSACIG00000008362) #22	RPS6KL1 (ENSACIG00000008333)	dlst (ENSACIG00000008305)	prox2 (ENSACIG00000008285)	ESRRB (ENSACIG00000008268) #18	GPATCH2L (ENSACIG00000008257) #17	IFT43 (ENSACIG00000008236) #16	tgfb3 (ENSACIG00000008212) #15	ENSACIG00000008200	ENSACIG00000008186	ERG28 (ENSACIG00000008170) #12	FLVCR2 (ENSACIG00000008129) #11	ENSACIG00000008112 #11	JDP2 (ENSACIG00000008079) #8	ENSACIG00000008052	ENSACIG00000008029
Tiger tail seahorse	MODERN SPECIES	350	ENSHCOG00000014660	ZFYVE1 (ENSHCOG00000014687)	CHAC1 (ENSHCOG00000014725)	DLL4 (ENSHCOG00000014751)	ENSHCOG00000014757	RASGRP1 (ENSHCOG00000014818)	SYNDIG1L (ENSHCOG00000014826)	VSX2 (ENSHCOG00000014841)	lin52 (ENSHCOG00000015111)	pomt2 (ENSHCOG00000015150) #28	ENSHCOG00000015186	AREL1 (ENSHCOG00000015249)	fcf1 (ENSHCOG00000015272)	VASH1 (ENSHCOG00000015290) #19	ENSHCOG00000015296 #20	LRRC74A (ENSHCOG00000015323) #22	ENSHCOG00000015354	ENSHCOG00000000429	tpp1 (ENSHCOG00000015390)	YY1 (ENSHCOG00000015397)	degs2 (ENSHCOG00000015415)	EVL (ENSHCOG00000015453)	eml1 (ENSHCOG00000015492)	ENSHCOG00000015560	disp2 (ENSHCOG00000015580)	rpusd2 (ENSHCOG00000015587)	pcmtl (ENSHCOG00000015605)	ccdc32 (ENSHCOG00000015611)	BAHD1 (ENSHCOG00000015643)	ivd (ENSHCOG00000015670)	itpka (ENSHCOG00000015694)
Pinecone sodierfish	MODERN SPECIES	14	ENSMMDG00005011602	ZFYVE1 (ENSMMDG00005011536)	RHOV (ENSMMDG00005011531)	CHAC1 (ENSMMDG00005011528)	DLL4 (ENSMMDG00005011519)	RASGRP1 (ENSMMDG00005011516)	SYNDIG1L (ENSMMDG00005011514)	VSX2 (ENSMMDG00005011510)	lin52 (ENSMMDG00005011504)	pomt2 (ENSMMDG00005011494) #28	ENSMMDG00005011473	AREL1 (ENSMMDG00005011459)	fcf1 (ENSMMDG00005011451)	VASH1 (ENSMMDG00005011436) #19	ENSMMDG00005011428 #20	LRRC74A (ENSMMDG00005011427) #22	ENSMMDG00005011425	ENSMMDG00005011423	RPS6KL1 (ENSMMDG00005011406)	dlst (ENSMMDG00005011127)	prox2 (ENSMMDG00005011116)	ESRRB (ENSMMDG00005011073) #18	GPATCH2L (ENSMMDG00005011070) #17	IFT43 (ENSMMDG00005011069) #16	tgfb3 (ENSMMDG00005011068) #15	ENSMMDG00005011064	ERG28 (ENSMMDG00005011058) #12	FLVCR2 (ENSMMDG00005011033) #11	JDP2 (ENSMMDG00005011026) #8	ENSMMDG00005011024	MLH3 (ENSMMDG00005011014)
Cod	MODERN SPECIES	18	ENSGMOG00000015709	ENSGMOG00000015818 #28	ENSGMOG00000015863	ENSGMOG00000015880	ENSGMOG00000029336	ENSGMOG00000015920	ENSGMOG00000015956	ENSGMOG00000016055	ENSGMOG00000016063	ENSGMOG00000016092	RGS6 (ENSGMOG00000016115)	ENSGMOG00000016143	GPX2 (ENSGMOG00000025855)	ENSGMOG00000016277	MAX (ENSGMOG00000016301)	ENSGMOG00000034383 #22	ENSGMOG00000031366	ENSGMOG00000015004	RPS6KL1 (ENSGMOG00000015101)	dlst (ENSGMOG00000015133)	prox2 (ENSGMOG00000015166)	ESRRB (ENSGMOG00000015180) #18	GPATCH2L (ENSGMOG00000034598) #17	ENSGMOG00000032252	IFT43 (ENSGMOG00000015229) #16	tgfb3 (ENSGMOG00000015251) #15	ENSGMOG00000015266	ERG28 (ENSGMOG00000015353) #12	FLVCR2 (ENSGMOG00000024949) #11	JDP2 (ENSGMOG00000015382) #8	ENSGMOG00000027603
Otomorpha	ANCESTRAL SPECIES	294											ENSGT00940000160884	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.e #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000155747.h #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Otophysi	ANCESTRAL SPECIES	252											ENSGT00940000160884	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.e #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000177781	ENSGT00940000155747.h #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8
Characiphysae	ANCESTRAL SPECIES	38	ENSGT01030000234667.b.f.b	ENSGT00940000155646.m	ENSGT00390000004263.b	ENSGT00390000007900	ENSGT00950000182995.e.a.a.a	ENSGT00940000161171	ENSGT00940000162520.g.f	ENSGT00940000163656	ENSGT00390000013092	ENSGT00940000155823.A	ENSGT00940000160884	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.e #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000177781	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
Channel catfish	MODERN SPECIES	28	odc1 (ENSIPUG00000008659)	Odc1 (ENSIPUG00000008600)	HPCAL1 (ENSIPUG00000008521)	sdc1 (ENSIPUG00000008506)	ENSIPUG00000008489	ENSIPUG00000008477	ENSIPUG00000008462	ENSIPUG00000008447	RHOB (ENSIPUG00000008426)	hs1bp3 (ENSIPUG00000008403)	ENSIPUG00000008341	arel1 (ENSIPUG00000008259)	fcf1 (ENSIPUG00000008200)	VASH1 (ENSIPUG00000008160) #19	angel1 (ENSIPUG00000008142) #20	LRRC74A (ENSIPUG00000008118) #22	ENSIPUG00000008106	ENSIPUG00000007940	rps6kl1 (ENSIPUG00000007905)	dlst (ENSIPUG00000007845)	prox2 (ENSIPUG00000007832)	esrrb (ENSIPUG00000007762) #18	gpatch2l (ENSIPUG00000007721) #17	ift43 (ENSIPUG00000007710) #16	tgfb3 (ENSIPUG00000007701) #15	ttll5 (ENSIPUG00000007622)	ERG28 (ENSIPUG00000007591) #12	flvcr2 (ENSIPUG00000007581) #11	jdp2 (ENSIPUG00000007544) #8	fos (ENSIPUG00000007522)	acyp1 (ENSIPUG00000007512)
Characiphysae_b	ANCESTRAL SPECIES	39	ENSGT01030000234667.b.f.b	ENSGT00940000155646.m	ENSGT00390000004263.b	ENSGT00390000007900	ENSGT00950000182995.e.a.a.a	ENSGT00940000161171	ENSGT00940000162520.g.f	ENSGT00940000163656	ENSGT00390000013092	ENSGT00940000155823.A	ENSGT00940000160884	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.e #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000177781	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a
Characoidei	ANCESTRAL SPECIES	41	ENSGT00390000004263.b	ENSGT00390000007900	ENSGT00950000182995.e.a.a.a	ENSGT00940000154645.A	ENSGT00940000161171	ENSGT00940000162520.g.e	ENSGT00940000162520.h	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00390000013092	ENSGT00940000155823.A	ENSGT00940000160884	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.e #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a	ENSGT00390000011103.B
Mexicana tetra	MODERN SPECIES	24	ENSAMXG00000036867	ENSAMXG00000037789	ENSAMXG00000030686	ENSAMXG00000029725	ENSAMXG00000042850	ENSAMXG00000030216	ENSAMXG00000029670	ENSAMXG00000033830	ENSAMXG00000035178	ENSAMXG00000031144	ENSAMXG00000042955	AREL1 (ENSAMXG00000014228)	fcf1 (ENSAMXG00000042249)	VASH1 (ENSAMXG00000014286) #19	ENSAMXG00000030578 #20	LRRC74A (ENSAMXG00000014305) #22	OLFM4 (ENSAMXG00000038459)	ENSAMXG00000014315	ENSAMXG00000035002	ENSAMXG00000014329	RPS6KL1 (ENSAMXG00000014346)	dlst (ENSAMXG00000014365)	prox2 (ENSAMXG00000014376)	esrrb (ENSAMXG00000034832) #18	GPATCH2L (ENSAMXG00000014403) #17	IFT43 (ENSAMXG00000014420) #16	tgfb3 (ENSAMXG00000014435) #15	ENSAMXG00000014451	ERG28 (ENSAMXG00000014479) #12	FLVCR2 (ENSAMXG00000014488) #11	JDP2 (ENSAMXG00000034514) #8
Red-bellied piranha	MODERN SPECIES	16	ATP6V1C2 (ENSPNAG00000010550)	nol10 (ENSPNAG00000001397)	odc1 (ENSPNAG00000010441)	HPCAL1 (ENSPNAG00000010423)	ENSPNAG00000010407	ENSPNAG00000010398	ENSPNAG00000010377	ENSPNAG00000010359	RHOB (ENSPNAG00000010304)	hs1bp3 (ENSPNAG00000010292)	LTBP2 (ENSPNAG00000010267)	AREL1 (ENSPNAG00000010175)	fcf1 (ENSPNAG00000010076)	VASH1 (ENSPNAG00000010048) #19	ENSPNAG00000010007 #20	LRRC74A (ENSPNAG00000001356) #22	ENSPNAG00000001354	ENSPNAG00000006678	CCR6 (ENSPNAG00000009905)	prox2 (ENSPNAG00000009888)	ENSPNAG00000001345	dlst (ENSPNAG00000009820)	esrrb (ENSPNAG00000006181) #18	GPATCH2L (ENSPNAG00000009720) #17	IFT43 (ENSPNAG00000009704) #16	tgfb3 (ENSPNAG00000001327) #15	ENSPNAG00000009662	ERG28 (ENSPNAG00000009627) #12	FLVCR2 (ENSPNAG00000009615) #11	JDP2 (ENSPNAG00000009605) #8	ENSPNAG00000009597
Electric eel	MODERN SPECIES	239	ENSEEEG00000008857	nol10 (ENSEEEG00000008867)	odc1 (ENSEEEG00000009262)	HPCAL1 (ENSEEEG00000009263)	ENSEEEG00000009273	ENSEEEG00000009275	ENSEEEG00000009276	ENSEEEG00000009277	ENSEEEG00000009281	hs1bp3 (ENSEEEG00000009284)	ENSEEEG00000009285	AREL1 (ENSEEEG00000009288)	fcf1 (ENSEEEG00000009294)	VASH1 (ENSEEEG00000009301) #19	ENSEEEG00000009302 #20	LRRC74A (ENSEEEG00000009308) #22	ENSEEEG00000009311	ENSEEEG00000009313	ENSEEEG00000009318
Cyprinoidei	ANCESTRAL SPECIES	176															ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00940000155454.w.a	ENSGT00940000159815	ENSGT00930000151014.q	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.e #18	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.a #11	ENSGT00940000155693.a.b #8	ENSGT00940000164930.a	ENSGT00390000011103.B	ENSGT00940000160947
Cyprininae	ANCESTRAL SPECIES	422	ENSGT00390000011802	ENSGT00990000213599	ENSGT00390000003581	ENSGT00940000154730.a	ENSGT00940000155490.b.a	ENSGT00550000074847	ENSGT00940000159462.a.a	ENSGT00940000158591.g.b.a	ENSGT00440000037341.b.a	ENSGT00940000159180.e	ENSGT00940000155643.c.b.a	ENSGT00390000018465	ENSGT00420000029820	ENSGT00940000156145	ENSGT00940000159057.i #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00390000009313.ib.b.a.e.b.b	ENSGT00940000155454.w.a	ENSGT00940000159815.a	ENSGT00930000151014.q.g.a.a	ENSGT00940000154790.b.a.b.e	ENSGT00940000153433.A.e.a.a #18	ENSGT00940000155747.g.a.c.b #15	ENSGT01030000234625.B.d.c.a.a #11
Goldfish	MODERN SPECIES	36	ENSCARG00000023468	ENSCARG00000023458	ENSCARG00000023455	ENSCARG00000023451	ENSCARG00000023439	ENSCARG00000023425	ENSCARG00000023424	kif6 (ENSCARG00000022342)	ENSCARG00000022280	ENSCARG00000022269	meis2a (ENSCARG00000021770)	ENSCARG00000021755	dph6 (ENSCARG00000021720)	NEK9 (ENSCARG00000021552)	ENSCARG00000021544 #20	ENSCARG00000021535 #22	ENSCARG00000021522	ENSCARG00000021512	ENSCARG00000021500	RPS6KL1 (ENSCARG00000021487)	dlst (ENSCARG00000020544)	prox2 (ENSCARG00000020521)	esrrb (ENSCARG00000020490) #18	tgfb3 (ENSCARG00000020480) #15	ENSCARG00000020298 #11	ENSCARG00000020286	JDP2 (ENSCARG00000020278) #8	ENSCARG00000020273	ENSCARG00000020266	syncripl (ENSCARG00000020068)	OTOF (ENSCARG00000019825)
Cyprininae_a	ANCESTRAL SPECIES	482										ENSGT00940000159180.f	ENSGT00940000155643.c.a	ENSGT00390000018465.n	ENSGT00420000029820	ENSGT00940000156145	ENSGT00940000159057.i #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000155454.w.b	ENSGT00390000009313.ib.b.a.e.b.b	ENSGT00940000155454.w.a	ENSGT00940000159815.a	ENSGT00930000151014.q.g.a.a	ENSGT00940000154790.b.a.b.e	ENSGT00940000153433.A.e.a.a #18	ENSGT00940000155747.g.a.c.b #15	ENSGT01030000234625.B.d.c.a.a #11
Common carp reference	MODERN SPECIES	4	exd1 (ENSCCRG00000051640)	FAM181A (ENSCCRG00000077401)	asb2b (ENSCCRG00000051643)	DDX24 (ENSCCRG00000039200)	ENSCCRG00000061416	ENSCCRG00000008243	fam98b (ENSCCRG00000008964)	spred1 (ENSCCRG00000053987)	meis2a (ENSCCRG00000056680)	cdin1 (ENSCCRG00000058229)	ENSCCRG00000061174	dph6 (ENSCCRG00000019593)	ENSCCRG00000046999	ENSCCRG00000046950 #20	ENSCCRG00000074528	ENSCCRG00000046921 #22	ENSCCRG00000046666	ENSCCRG00000059612	ENSCCRG00000018057	RPS6KL1 (ENSCCRG00000058925)	dlst (ENSCCRG00000030002)	prox2 (ENSCCRG00000030011)	esrrb (ENSCCRG00000004324) #18	tgfb3 (ENSCCRG00000055181) #15	ENSCCRG00000050688 #11	ENSCCRG00000058481 #8	ENSCCRG00000080537	ENSCCRG00000057155	ENSCCRG00000039881	syncripl (ENSCCRG00000045720)	ENSCCRG00000063553
Golden-line barbel	MODERN SPECIES	879																ENSSGRG00000027858 #22	ENSSGRG00000027856	ENSSGRG00000027852	ENSSGRG00000027849	RPS6KL1 (ENSSGRG00000027843)	dlst (ENSSGRG00000027826)	prox2 (ENSSGRG00000027825)	esrrb (ENSSGRG00000027824) #18
Zebrafish	MODERN SPECIES	8	ENSDARG00000099534	exd1 (ENSDARG00000098669)	asb2b (ENSDARG00000102490)	ENSDARG00000101867	DDX24 (ENSDARG00000104708)	ENSDARG00000036968	atxn3 (ENSDARG00000099274)	GABRR1 (ENSDARG00000098081)	VASH1 (ENSDARG00000092716) #19	dph6 (ENSDARG00000042839)	cdin1 (ENSDARG00000070461)	meis2a (ENSDARG00000098240)	spred1 (ENSDARG00000041449)	fam98b (ENSDARG00000060068)	ENSDARG00000077567 #20	ENSDARG00000060062 #22	ENSDARG00000087625	ENSDARG00000041960	RPS6KL1 (ENSDARG00000079024)	dlst (ENSDARG00000014230)	prox2 (ENSDARG00000041952)	esrrb (ENSDARG00000100847) #18	tgfb3 (ENSDARG00000019367) #15	ENSDARG00000036793	ERG28 (ENSDARG00000111290) #12	FLVCR2 (ENSDARG00000038957) #11	numb (ENSDARG00000027279)	exd2 (ENSDARG00000016117)	ENSDARG00000086027	odc1 (ENSDARG00000007377)	nol10 (ENSDARG00000020077)
Osteoglossiformes	ANCESTRAL SPECIES	55								ENSGT00940000157776	ENSGT00390000008402	ENSGT00940000156829 #28	ENSGT00940000160884	ENSGT00940000156723	ENSGT00940000153117.B	ENSGT00390000012703.b #19	ENSGT00940000159057 #20	ENSGT00940000154297.A.g.a #22	ENSGT00940000159815	ENSGT00930000151014	ENSGT00940000154790.b.a.b	ENSGT00940000153433.A.f #18	ENSGT00410000025698.b #17	ENSGT00390000012060 #16	ENSGT00940000155747.g.a #15	ENSGT00940000162939 #13	ENSGT00940000162910	ENSGT00390000010925 #12	ENSGT01030000234625.B.d.c.c #11	ENSGT00940000155693.a.a #8	ENSGT00940000164930.c	ENSGT00940000159276.a #7	ENSGT00550000074954.r.a
P. kingsleyae	MODERN SPECIES	24	ENSPKIG00000004062	ENSPKIG00000004052	capn1b (ENSPKIG00000003990)	capn2b (ENSPKIG00000003898)	capn8 (ENSPKIG00000003843)	ENSPKIG00000003800	vsx2 (ENSPKIG00000003775)	lin52 (ENSPKIG00000003735)	pomt2 (ENSPKIG00000003634) #28	ENSPKIG00000003584	LTBP2 (ENSPKIG00000003529)	AREL1 (ENSPKIG00000003455)	fcf1 (ENSPKIG00000003415)	VASH1 (ENSPKIG00000003394) #19	ENSPKIG00000003362 #20	LRRC74A (ENSPKIG00000003331) #22	RPS6KL1 (ENSPKIG00000003306)	dlst (ENSPKIG00000003270)	prox2 (ENSPKIG00000003249)	ESRRB (ENSPKIG00000003231) #18	GPATCH2L (ENSPKIG00000003198) #17	IFT43 (ENSPKIG00000003158) #16	tgfb3 (ENSPKIG00000003114) #15	ENSPKIG00000003073 #13	ENSPKIG00000003052	ERG28 (ENSPKIG00000003041) #12	FLVCR2 (ENSPKIG00000003023) #11	batf (ENSPKIG00000003014) #10	jdp2b (ENSPKIG00000002981) #8	ENSPKIG00000002955	fosab (ENSPKIG00000002938) #7
Asian bonytongue	MODERN SPECIES	6	ENSSFOG00015027907	FMN1 (ENSSFOG00015009547)	GREM1 (ENSSFOG00015030421)	SCG5 (ENSSFOG00015027666)	arhgap11a (ENSSFOG00015009334)	ACTC1 (ENSSFOG00015009323)	EIF2AK4 (ENSSFOG00015009191)	ENSSFOG00015009137	vsx2 (ENSSFOG00015030957)	pomt2 (ENSSFOG00015023871) #28	LTBP2 (ENSSFOG00015023881)	AREL1 (ENSSFOG00015023906)	fcf1 (ENSSFOG00015029115)	VASH1 (ENSSFOG00015023912) #19	ANGEL1 (ENSSFOG00015023916) #20	LRRC74A (ENSSFOG00015023917) #22	RPS6KL1 (ENSSFOG00015023920)	dlst (ENSSFOG00015023927)	prox2 (ENSSFOG00015023932)	ESRRB (ENSSFOG00015023935) #18	GPATCH2L (ENSSFOG00015023938) #17	IFT43 (ENSSFOG00015023942) #16	tgfb3 (ENSSFOG00015031700) #15	ENSSFOG00015027867	ERG28 (ENSSFOG00015032324) #12	FLVCR2 (ENSSFOG00015008109) #11	batf (ENSSFOG00015030749) #10	ENSSFOG00015024679 #8	ENSSFOG00015023968	fosab (ENSSFOG00015023971) #7	tmed10 (ENSSFOG00015033273)
Spotted gar	MODERN SPECIES	673	eif2b2 (ENSLOCG00000010473)	tmed10 (ENSLOCG00000010496)	fosab (ENSLOCG00000010507) #7	ENSLOCG00000010517	jdp2b (ENSLOCG00000010526) #8	batf (ENSLOCG00000010533) #10	FLVCR2 (ENSLOCG00000010536) #11	ERG28 (ENSLOCG00000010553) #12	ENSLOCG00000010563	tgfb3 (ENSLOCG00000010588) #15	IFT43 (ENSLOCG00000010599) #16	GPATCH2L (ENSLOCG00000010621) #17	esrrb (ENSLOCG00000010630) #18	VASH1 (ENSLOCG00000010644) #19	ANGEL1 (ENSLOCG00000010649) #20	LRRC74A (ENSLOCG00000010657) #22	OLFM4 (ENSLOCG00000010671)	RPS6KL1 (ENSLOCG00000010678)	dlst (ENSLOCG00000010687)	prox2 (ENSLOCG00000010701)	YLPM1 (ENSLOCG00000010710)	fcf1 (ENSLOCG00000010728)	AREL1 (ENSLOCG00000010734)	LTBP2 (ENSLOCG00000010749)	pomt2 (ENSLOCG00000010763) #28	gstz1 (ENSLOCG00000010781) #29	zgc:163014 (ENSLOCG00000010791)	ENSLOCG00000010816 #31	ATG2B (ENSLOCG00000010820)	gskip (ENSLOCG00000010833)	npc2.1 (ENSLOCG00000010850)
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000154297.A.g.b #22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000154297.A.g.b #22
Clupeocephala	ANCESTRAL SPECIES	349						ENSGT00440000038430	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000155747.g.b #15	ENSGT00940000153433.A.e #18	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837
Otomorpha	ANCESTRAL SPECIES	433								ENSGT00440000038430	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000159745 #10	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837
Clupeiformes	ANCESTRAL SPECIES	43											ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00390000016097.c	ENSGT00940000164083	ENSGT00940000157159.e	ENSGT00390000016097.d	ENSGT00940000159153	ENSGT00940000157159.f	ENSGT00940000155944.f.b	ENSGT00940000157848.a.b	ENSGT00950000183128.C	ENSGT00530000064011.c	ENSGT00950000182808.a.a.b.a.c	ENSGT00940000158275
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	6	GPRC6A (ENSCHAG00000013811)	ENSCHAG00000013802	YPEL5 (ENSCHAG00000013778)	ENSCHAG00000013683	PPP1CB (ENSCHAG00000013454)	bpnt1 (ENSCHAG00000013362)	DNAH8 (ENSCHAG00000011661)	ENSCHAG00000011627	tmem214 (ENSCHAG00000011278)	zc3h14 (ENSCHAG00000011031)	eif2b2 (ENSCHAG00000010922)	tmed10 (ENSCHAG00000010858)	fosab (ENSCHAG00000010844) #7	ENSCHAG00000010831	jdp2b (ENSCHAG00000010789) #8	ENSCHAG00000010740 #22	DLST (ENSCHAG00000010561)	ENSCHAG00000010514	YLPM1 (ENSCHAG00000010494)	ZFYVE1 (ENSCHAG00000010125)	wdr21 (ENSCHAG00000009827)	dpf3 (ENSCHAG00000009741)	rgs6 (ENSCHAG00000008298)	sipa1l1 (ENSCHAG00000007852)	rab15 (ENSCHAG00000007807)	fntb (ENSCHAG00000007564)	max (ENSCHAG00000007485)	SLC10A1 (ENSCHAG00000007465)	srsf5b (ENSCHAG00000007427)	susd6 (ENSCHAG00000007390)	ENSCHAG00000007370
Atlantic herring	MODERN SPECIES	5	tfb1m (ENSCHAG00000008629)	CLDN20 (ENSCHAG00000008645)	TIAM2 (ENSCHAG00000008655)	ENSCHAG00000008752	PRKD3 (ENSCHAG00000008830)	pax1a (ENSCHAG00000012504)	nkx2.2a (ENSCHAG00000012578)	ENSCHAG00000012614	nkx2.4a (ENSCHAG00000012635)	kiz (ENSCHAG00000012668)	RALGAPA2 (ENSCHAG00000012862)	insm1b (ENSCHAG00000017345)	COL12A1 (ENSCHAG00000017415)	COX7A2 (ENSCHAG00000020774)	tmem30aa (ENSCHAG00000020873)	ENSCHAG00000020883 #22	ENSCHAG00000020906	prox2 (ENSCHAG00000020915)	esrrb (ENSCHAG00000020955) #18	ENSCHAG00000021097 #16	ENSCHAG00000021116	tgfb3 (ENSCHAG00000021621) #15	ENSCHAG00000021646	ENSCHAG00000021654	supt7l (ENSCHAG00000021668)	ENSCHAG00000021679	mrpl33 (ENSCHAG00000021738)	ENSCHAG00000021751	ENSCHAG00000021772	ENSCHAG00000021781	rbks (ENSCHAG00000021795)
Euteleosteomorpha	ANCESTRAL SPECIES	131	ENSGT00940000158687.a.a	ENSGT00950000183212.B	ENSGT00390000017252	ENSGT00550000075009	ENSGT00940000160284	ENSGT00390000013853	ENSGT00940000158299.a	ENSGT00940000157269.a.a	ENSGT00940000173326	ENSGT00440000038430	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10
Protacanthopterygii	ANCESTRAL SPECIES	120																ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837.u.b	ENSGT00440000039837.u.a	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00940000155693.a.a #8	ENSGT00940000164930.b	ENSGT00940000159276 #7	ENSGT00550000074954	ENSGT00550000074908	ENSGT00440000038430	ENSGT00940000173326
Salmoninae	ANCESTRAL SPECIES	1162																ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r.c	ENSGT00940000154790.b.a.a.b	ENSGT00440000039837.u.a.a
Salmoninae_a	ANCESTRAL SPECIES	30	ENSGT00390000007874.d	ENSGT01030000234597.a.b.a.b.a.a	ENSGT01050000244824.B.m.b	ENSGT00940000159860.e	ENSGT00940000157136.b.h	ENSGT00950000183149.C.b.b	ENSGT00950000182774.b.a.b.a.b.a.a.a.b.a.b	ENSGT00940000166937	ENSGT00390000013141.d	ENSGT00940000155500.f.f	ENSGT00940000154928.c.a.b.a	ENSGT00940000155621.wc	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a.c	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r.c	ENSGT00940000154790.b.a.a.b	ENSGT00440000039837.u.a.a	ENSGT00940000153433.A.e.e #18	ENSGT00940000155747.g.b.a #15	ENSGT01030000234625.B.d.c.b.c #11	ENSGT00940000159745.c.a #10	ENSGT00940000155693.a.a.c.b #8	ENSGT00940000164930.b.c	ENSGT00940000159276.h #7	ENSGT00550000074954.p.b	ENSGT00550000074908.o	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a.g
Salmo	ANCESTRAL SPECIES	12	ENSGT01030000234597.a.b.a.b.a.a	ENSGT01050000244824.B.m.b	ENSGT00940000159860.e	ENSGT00940000157136.b.h	ENSGT00950000183149.C.b.b	ENSGT00950000182774.b.a.b.a.b.a.a.a.b.a.b	ENSGT00940000166937	ENSGT00390000013141.d	ENSGT00940000155500.f.f.c	ENSGT00940000155500.f.f.d	ENSGT00940000154928.c.a.b.a	ENSGT00940000155621.wc	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a.c	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r.c	ENSGT00940000154790.b.a.a.b	ENSGT00440000039837.u.a.a	ENSGT00940000153433.A.e.e #18	ENSGT00940000155747.g.b.a #15	ENSGT01060000250365	ENSGT01030000234625.B.d.c.b.c #11	ENSGT00940000159745.c.a #10	ENSGT00940000155693.a.a.c.b #8	ENSGT00940000164930.b.c	ENSGT00940000159276.h #7	ENSGT00550000074954.p.b	ENSGT00550000074908.o	ENSGT00440000038430	ENSGT00940000173326
Atlantic salmon	MODERN SPECIES	25	ENSSSAG00000043476	mcm3 (ENSSSAG00000043532)	paqr8 (ENSSSAG00000106493)	znf395b (ENSSSAG00000043583)	pnocb (ENSSSAG00000115566)	ENSSSAG00000117071	si:ch211-63o20.7 (ENSSSAG00000043610)	elp3 (ENSSSAG00000043627)	ENSSSAG00000044344	ENSSSAG00000050640	ENSSSAG00000109642	ENSSSAG00000050666	ENSSSAG00000062923	ENSSSAG00000050699	ENSSSAG00000050757	ENSSSAG00000050768 #22	DLST (ENSSSAG00000103763)	ENSSSAG00000089828	ENSSSAG00000050821	YLPM1 (ENSSSAG00000050827)	ENSSSAG00000110761 #18	ENSSSAG00000119991	ENSSSAG00000110988	ENSSSAG00000116256	ENSSSAG00000050848 #15	ENSSSAG00000119318	FLVCR2 (ENSSSAG00000121196) #11	ENSSSAG00000111782 #10	jdp2b (ENSSSAG00000050967) #8	ENSSSAG00000082404	fosab (ENSSSAG00000109807) #7
Huchen	MODERN SPECIES	2873																ENSHHUG00000025037 #22	DLST (ENSHHUG00000025020)	PROX2 (ENSHHUG00000025003)	YLPM1 (ENSHHUG00000024988)
Acanthomorphata	ANCESTRAL SPECIES	97	ENSGT00950000183212.B	ENSGT00390000017252	ENSGT00550000075009	ENSGT00940000160284	ENSGT00390000013853	ENSGT01000000215766	ENSGT00940000158299.a	ENSGT00940000157269.a.a	ENSGT00940000173326	ENSGT00440000038430	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10
Euacanthomorphacea	ANCESTRAL SPECIES	13	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252
Percomorphaceae	ANCESTRAL SPECIES	14	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT01000000215766	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009
Percomorphaceae_B	ANCESTRAL SPECIES	18	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252
Ovalentaria	ANCESTRAL SPECIES	19	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252
Ovalentaria_B	ANCESTRAL SPECIES	17	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.d.b.b #11	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009
Cichlidae	ANCESTRAL SPECIES	12	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.d.b.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252	ENSGT00950000183212.B
Pseudocrenilabrinae	ANCESTRAL SPECIES	6	ENSGT00730000111174.f	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252	ENSGT00950000183212.B
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	3	ENSGT00730000111174.f	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252	ENSGT00950000183212.B
Haplochromini	ANCESTRAL SPECIES	13	ENSGT00730000111174.f	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252	ENSGT00950000183212.B
Burton s mouthbrooder	MODERN SPECIES	276	cfap45 (ENSHBUG00000011608)	ENSHBUG00000011631	ppp1r13bb (ENSHBUG00000011733)	daam1b (ENSHBUG00000011796)	L3HYPDH (ENSHBUG00000011810)	kcnh5a (ENSHBUG00000011838)	ENSHBUG00000011846	abcd4 (ENSHBUG00000011978)	ENSHBUG00000012052	vsx2 (ENSHBUG00000012075)	eif2b2 (ENSHBUG00000012113)	tmed10 (ENSHBUG00000012126)	fosab (ENSHBUG00000012155) #7	ENSHBUG00000012204	jdp2b (ENSHBUG00000012218) #8	ENSHBUG00000012234 #22	DLST (ENSHBUG00000012267)	ENSHBUG00000012272	YLPM1 (ENSHBUG00000012325)	esrrb (ENSHBUG00000012379) #18	TGFB3 (ENSHBUG00000012406) #15	ENSHBUG00000012486 #11	batf (ENSHBUG00000012500) #10	zc3h14 (ENSHBUG00000012522)	ptk2bb (ENSHBUG00000012561)	CHRNA2 (ENSHBUG00000012577)	ENSHBUG00000012585	nme6 (ENSHBUG00000012626)	eif2b4 (ENSHBUG00000012690)	atraid (ENSHBUG00000012717)	snx17 (ENSHBUG00000012794)
Haplochromini_A	ANCESTRAL SPECIES	11	ENSGT00730000111174.f	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT01030000234625.B.d.d.b.a #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252
Haplochromini_B	ANCESTRAL SPECIES	22	ENSGT00730000111174.f	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT01030000234625.B.d.d.b.a #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252
Eastern happy	MODERN SPECIES	6	ENSACLG00000014246	ppp1r13bb (ENSACLG00000013884)	daam1b (ENSACLG00000013675)	L3HYPDH (ENSACLG00000013408)	ENSACLG00000013387	SGPP1 (ENSACLG00000013382)	abcd4 (ENSACLG00000013349)	ENSACLG00000013330	vsx2 (ENSACLG00000013323)	eif2b2 (ENSACLG00000013294)	tmed10 (ENSACLG00000013280)	ENSACLG00000013275	fosab (ENSACLG00000013269) #7	ENSACLG00000013262	jdp2b (ENSACLG00000013258) #8	ENSACLG00000013199 #22	DLST (ENSACLG00000013180)	ENSACLG00000013177	YLPM1 (ENSACLG00000013109)	esrrb (ENSACLG00000012797) #18	TGFB3 (ENSACLG00000012784) #15	FLVCR2 (ENSACLG00000012759) #11	ENSACLG00000012746 #11	batf (ENSACLG00000012725) #10	zc3h14 (ENSACLG00000012665)	ptk2bb (ENSACLG00000012333)	CHRNA2 (ENSACLG00000012300)	ENSACLG00000012294	nme6 (ENSACLG00000012254)	eif2b4 (ENSACLG00000012164)	atraid (ENSACLG00000012105)
Zebra mbuna	MODERN SPECIES	1097	cfap45 (ENSMZEG00005016659)	ENSMZEG00005016655	ppp1r13bb (ENSMZEG00005016646)	daam1b (ENSMZEG00005016609)	L3HYPDH (ENSMZEG00005016595)	ENSMZEG00005016585	ENSMZEG00005016583	abcd4 (ENSMZEG00005016566)	ENSMZEG00005016539	vsx2 (ENSMZEG00005016530)	eif2b2 (ENSMZEG00005016450)	tmed10 (ENSMZEG00005016445)	fosab (ENSMZEG00005016439) #7	ENSMZEG00005016427	jdp2b (ENSMZEG00005016423) #8	ENSMZEG00005016419 #22	DLST (ENSMZEG00005016409)	ENSMZEG00005016401	YLPM1 (ENSMZEG00005016383)	esrrb (ENSMZEG00005016372) #18	ENSMZEG00005016362	TGFB3 (ENSMZEG00005016356) #15	FLVCR2 (ENSMZEG00005016338) #11	ENSMZEG00005016331 #11	batf (ENSMZEG00005016329) #10	zc3h14 (ENSMZEG00005016319)	tcf21 (ENSMZEG00005016294)	eya4 (ENSMZEG00005016269)	rps12 (ENSMZEG00005016253)	ENSMZEG00005016248	ENSMZEG00005016236
Nile tilapia	MODERN SPECIES	6	ENSONIG00000041404	ENSONIG00000013564	ppp1r13bb (ENSONIG00000013567)	daam1b (ENSONIG00000013573)	L3HYPDH (ENSONIG00000013579)	KCNH5 (ENSONIG00000013580)	SGPP1 (ENSONIG00000030916)	abcd4 (ENSONIG00000013589)	ENSONIG00000013592	vsx2 (ENSONIG00000013597)	eif2b2 (ENSONIG00000015252)	tmed10 (ENSONIG00000015257)	fosab (ENSONIG00000036571) #7	ENSONIG00000015266	jdp2b (ENSONIG00000015268) #8	ENSONIG00000015269 #22	DLST (ENSONIG00000015272)	ENSONIG00000038853	YLPM1 (ENSONIG00000015280)	esrrb (ENSONIG00000015282) #18	TGFB3 (ENSONIG00000015284) #15	ENSONIG00000015287 #11	ENSONIG00000027931 #11	batf (ENSONIG00000039750) #10	zc3h14 (ENSONIG00000015292)	ptk2bb (ENSONIG00000015297)	CHRNA2 (ENSONIG00000015309)	nme6 (ENSONIG00000027332)	ENSONIG00000039243	eif2b4 (ENSONIG00000015313)	atraid (ENSONIG00000015316)
Pomacentridae	ANCESTRAL SPECIES	34	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253.e	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.d.b.b #11	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009
Pomacentridae_A	ANCESTRAL SPECIES	33	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253.e	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.d.b.b #11	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009
Amphiprion	ANCESTRAL SPECIES	51	ENSGT00950000182852.A.a.a.a	ENSGT00390000004660.C.a.a.d	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253.e	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.d.b.b #11	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009
Orange clownfish	MODERN SPECIES	2	ercc4 (ENSAPEG00000000628)	ppp1r13bb (ENSAPEG00000000846)	daam1b (ENSAPEG00000000913)	L3HYPDH (ENSAPEG00000000958)	kcnh5a (ENSAPEG00000001002)	SGPP1 (ENSAPEG00000001044)	abcd4 (ENSAPEG00000001064)	ENSAPEG00000001198	ENSAPEG00000001297	vsx2 (ENSAPEG00000001332)	eif2b2 (ENSAPEG00000001351)	tmed10 (ENSAPEG00000001388)	fosab (ENSAPEG00000001415) #7	ENSAPEG00000001432	jdp2b (ENSAPEG00000001618) #8	ENSAPEG00000001634 #22	DLST (ENSAPEG00000001698)	ENSAPEG00000001710	YLPM1 (ENSAPEG00000001749)	esrrb (ENSAPEG00000001797) #18	TGFB3 (ENSAPEG00000001818) #15	FLVCR2 (ENSAPEG00000001849) #11	batf (ENSAPEG00000001859) #10	zc3h14 (ENSAPEG00000001867)	ENSAPEG00000001895	ptk2bb (ENSAPEG00000001933)	CHRNA2 (ENSAPEG00000002072)	ENSAPEG00000002186	nme6 (ENSAPEG00000002211)	eif2b4 (ENSAPEG00000002245)	atraid (ENSAPEG00000002265)
Percomorphaceae_C	ANCESTRAL SPECIES	19	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT01030000234625.B.d.d.b.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009
Eupercaria	ANCESTRAL SPECIES	16	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.d.b.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284
Eupecaria_A	ANCESTRAL SPECIES	16	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.d.b.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284
Eupecaria_B	ANCESTRAL SPECIES	16	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.d.b.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284
Eupecaria_C	ANCESTRAL SPECIES	16	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.d.b.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252
Gilthead seabream	MODERN SPECIES	14	ENSSAUG00010004528	ENSSAUG00010004531	ppp1r13bb (ENSSAUG00010004582)	daam1b (ENSSAUG00010006758)	L3HYPDH (ENSSAUG00010006928)	kcnh5a (ENSSAUG00010006956)	SGPP1 (ENSSAUG00010007715)	abcd4 (ENSSAUG00010007771)	ENSSAUG00010008793	vsx2 (ENSSAUG00010008905)	eif2b2 (ENSSAUG00010008912)	tmed10 (ENSSAUG00010008915)	fosab (ENSSAUG00010008920) #7	ENSSAUG00010008923	jdp2b (ENSSAUG00010008924) #8	ENSSAUG00010008926 #22	DLST (ENSSAUG00010008933)	ENSSAUG00010009351	YLPM1 (ENSSAUG00010009355)	YLPM1 (ENSSAUG00010009369)	esrrb (ENSSAUG00010009387) #18	TGFB3 (ENSSAUG00010009390) #15	FLVCR2 (ENSSAUG00010009399) #11	batf (ENSSAUG00010009549) #10	zc3h14 (ENSSAUG00010009551)	ENSSAUG00010009555	ptk2bb (ENSSAUG00010009567)	CHRNA2 (ENSSAUG00010009713)	ENSSAUG00010009715	nme6 (ENSSAUG00010009716)	eif2b4 (ENSSAUG00010009718)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	11	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.d.b.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252	ENSGT00950000183212.B
Large yellow croaker	MODERN SPECIES	482	ENSLCRG00005010449	ppp1r13bb (ENSLCRG00005010456)	daam1b (ENSLCRG00005011689)	L3HYPDH (ENSLCRG00005011845)	kcnh5a (ENSLCRG00005011847)	SGPP1 (ENSLCRG00005011873)	abcd4 (ENSLCRG00005011891)	ENSLCRG00005012750	vsx2 (ENSLCRG00005013203)	eif2b2 (ENSLCRG00005013207)	tmed10 (ENSLCRG00005013219)	ENSLCRG00005013223	fosab (ENSLCRG00005013224) #7	ENSLCRG00005013225	jdp2b (ENSLCRG00005013226) #8	ENSLCRG00005013227 #22	ENSLCRG00005013228	ENSLCRG00005013229	esrrb (ENSLCRG00005013231) #18	TGFB3 (ENSLCRG00005013233) #15	FLVCR2 (ENSLCRG00005013234) #11	batf (ENSLCRG00005013237) #10	zc3h14 (ENSLCRG00005013240)	ENSLCRG00005013242	ptk2bb (ENSLCRG00005013244)	CHRNA2 (ENSLCRG00005013284)	ENSLCRG00005013288	nme6 (ENSLCRG00005013289)	eif2b4 (ENSLCRG00005013295)	atraid (ENSLCRG00005013298)	snx17 (ENSLCRG00005013304)
European seabass	MODERN SPECIES	7	ENSDLAG00005029515	ENSDLAG00005012214	ENSDLAG00005012000	ENSDLAG00005011986	ENSDLAG00005031391	ENSDLAG00005011850	ENSDLAG00005034267	ENSDLAG00005011058	ENSDLAG00005021841	ENSDLAG00005016948	eif2b2 (ENSDLAG00005032222)	tmed10 (ENSDLAG00005010986)	fosab (ENSDLAG00005010958) #7	ENSDLAG00005010932	ENSDLAG00005026347 #8	ENSDLAG00005010885 #22	ENSDLAG00005027128	ENSDLAG00005010630	ENSDLAG00005010599 #18	ENSDLAG00005010587 #15	ENSDLAG00005029128	ENSDLAG00005028314 #11	ENSDLAG00005010517	ENSDLAG00005027993	ptk2bb (ENSDLAG00005010190)	ENSDLAG00005010161	ENSDLAG00005010148	nme6 (ENSDLAG00005010131)	eif2b4 (ENSDLAG00005010066)	atraid (ENSDLAG00005026457)	snx17 (ENSDLAG00005009804)
Perciformes	ANCESTRAL SPECIES	14	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.d.b.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284
Cottioidei	ANCESTRAL SPECIES	23	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT01000000215766	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009
Stickleback	MODERN SPECIES	18	gata4 (ENSGACG00000010274)	NCOA7 (ENSGACG00000010278)	ENSGACG00000010284	ppp1r13bb (ENSGACG00000010288)	daam1b (ENSGACG00000010299)	L3HYPDH (ENSGACG00000010318)	kcnh5a (ENSGACG00000010336)	SGPP1 (ENSGACG00000010351)	abcd4 (ENSGACG00000010354)	ENSGACG00000010367	eif2b2 (ENSGACG00000010441)	tmed10 (ENSGACG00000010450)	fosab (ENSGACG00000010476) #7	ENSGACG00000010481	jdp2b (ENSGACG00000010513) #8	ENSGACG00000010524 #22	DLST (ENSGACG00000010529)	ENSGACG00000010545	YLPM1 (ENSGACG00000010546)	esrrb (ENSGACG00000010561) #18	TGFB3 (ENSGACG00000010565) #15	FLVCR2 (ENSGACG00000010588) #11	batf (ENSGACG00000010594) #10	zc3h14 (ENSGACG00000010599)	ptk2bb (ENSGACG00000010609)	CHRNA2 (ENSGACG00000010624)	cfap20 (ENSGACG00000010649)	ENSGACG00000010660	nme6 (ENSGACG00000010663)	ENSGACG00000010677	eif2b4 (ENSGACG00000010680)
Lumpfish	MODERN SPECIES	16	ENSCLMG00005020407	ppp1r13bb (ENSCLMG00005019938)	ENSCLMG00005019926	daam1b (ENSCLMG00005019800)	L3HYPDH (ENSCLMG00005019792)	KCNH5 (ENSCLMG00005019791)	SGPP1 (ENSCLMG00005019790)	abcd4 (ENSCLMG00005019603)	ENSCLMG00005019594	VSX2 (ENSCLMG00005019574)	eif2b2 (ENSCLMG00005019569)	tmed10 (ENSCLMG00005019567)	fosab (ENSCLMG00005019566) #7	ENSCLMG00005019544	JDP2 (ENSCLMG00005019541) #8	ENSCLMG00005019540 #22	DLST (ENSCLMG00005019329)	ENSCLMG00005019321	YLPM1 (ENSCLMG00005019318)	ESRRB (ENSCLMG00005019316) #18	TGFB3 (ENSCLMG00005019292) #15	FLVCR2 (ENSCLMG00005019286) #11	batf (ENSCLMG00005019284) #10	zc3h14 (ENSCLMG00005019281)	ENSCLMG00005019279	ptk2bb (ENSCLMG00005019138)	CHRNA2 (ENSCLMG00005019132)	ENSCLMG00005019131	ENSCLMG00005019127	eif2b4 (ENSCLMG00005019101)	atraid (ENSCLMG00005019100)
Perciformes_a	ANCESTRAL SPECIES	15	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT01030000234625.B.d.d.b.a #11	ENSGT01030000234625.B.d.d.b.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284
Pike perch	MODERN SPECIES	4	ENSSLUG00000024916	ENSSLUG00000024920	ppp1r13bb (ENSSLUG00000024949)	daam1b (ENSSLUG00000025047)	L3HYPDH (ENSSLUG00000025088)	ENSSLUG00000025091	SGPP1 (ENSSLUG00000025093)	abcd4 (ENSSLUG00000025106)	ENSSLUG00000025145	vsx2 (ENSSLUG00000025176)	eif2b2 (ENSSLUG00000025183)	tmed10 (ENSSLUG00000025188)	fosab (ENSSLUG00000025189) #7	ENSSLUG00000025193	JDP2 (ENSSLUG00000025202) #8	ENSSLUG00000025204 #22	DLST (ENSSLUG00000025216)	ENSSLUG00000025235	ENSSLUG00000025239	ENSSLUG00000025243	esrrb (ENSSLUG00000025248) #18	TGFB3 (ENSSLUG00000025252) #15	FLVCR2 (ENSSLUG00000025259) #11	ENSSLUG00000025264 #11	batf (ENSSLUG00000025267) #10	zc3h14 (ENSSLUG00000003669)	ENSSLUG00000003684	ptk2bb (ENSSLUG00000003692)	CHRNA2 (ENSSLUG00000003727)	ENSSLUG00000003744	nme6 (ENSSLUG00000003754)
Percomorphaceae_D	ANCESTRAL SPECIES	18	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252
Carangaria	ANCESTRAL SPECIES	18	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252
Carangaria_A	ANCESTRAL SPECIES	13	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252
Barramundi perch	MODERN SPECIES	162	si:dkey-25e12.3 (ENSLCAG00010008769)	ENSLCAG00010008765	ppp1r13bb (ENSLCAG00010008755)	daam1b (ENSLCAG00010008688)	L3HYPDH (ENSLCAG00010008674)	KCNH5 (ENSLCAG00010008671)	SGPP1 (ENSLCAG00010008665)	abcd4 (ENSLCAG00010008552)	ENSLCAG00010008524	vsx2 (ENSLCAG00010008520)	eif2b2 (ENSLCAG00010008491)	tmed10 (ENSLCAG00010008470)	fosab (ENSLCAG00010008466) #7	ENSLCAG00010008465	jdp2b (ENSLCAG00010008462) #8	ENSLCAG00010008454 #22	DLST (ENSLCAG00010008407)	ENSLCAG00010008381	YLPM1 (ENSLCAG00010008365)	esrrb (ENSLCAG00010008351) #18	TGFB3 (ENSLCAG00010008342) #15	ENSLCAG00010008338 #11	ENSLCAG00010008334 #11
Seriola	ANCESTRAL SPECIES	4	ENSGT00940000158299.a	ENSGT00940000157269.a.a	ENSGT00940000173326	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000153463.a.c.b	ENSGT00510000047616.a.a	ENSGT00510000047616.a.b	ENSGT00940000155141.w.a	ENSGT00940000155141.x	ENSGT00940000158349	ENSGT00390000016034
Greater amberjack	MODERN SPECIES	10	ptk2bb (ENSSDUG00000014546)	ENSSDUG00000014582	daam1b (ENSSDUG00000014610)	L3HYPDH (ENSSDUG00000014690)	kcnh5a (ENSSDUG00000014701)	SGPP1 (ENSSDUG00000014727)	abcd4 (ENSSDUG00000014738)	ENSSDUG00000014824	vsx2 (ENSSDUG00000014864)	eif2b2 (ENSSDUG00000014892)	tmed10 (ENSSDUG00000014920)	fosab (ENSSDUG00000014939) #7	fosab (ENSSDUG00000015050) #7	ENSSDUG00000015080	jdp2b (ENSSDUG00000015263) #8	ENSSDUG00000015277 #22	DLST (ENSSDUG00000015306)	ENSSDUG00000015329	YLPM1 (ENSSDUG00000015345)	esrrb (ENSSDUG00000015388) #18	TGFB3 (ENSSDUG00000015416) #15	FLVCR2 (ENSSDUG00000015509) #11	batf (ENSSDUG00000015575) #10	zc3h14 (ENSSDUG00000015595)	ppp1r13bb (ENSSDUG00000015641)	ENSSDUG00000015696	ENSSDUG00000015730	ENSSDUG00000015755	ENSSDUG00000015796	gata4 (ENSSDUG00000015806)	fdft1 (ENSSDUG00000015827)
Anabantaria	ANCESTRAL SPECIES	20	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252
Anabantoidei	ANCESTRAL SPECIES	15	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000157776.c.a	ENSGT00550000074908	ENSGT00550000074954	ENSGT00940000159276 #7	ENSGT00940000164930.b	ENSGT00940000155693.a.a #8	ENSGT00940000154297.A.g.b #22	ENSGT00930000151014.r	ENSGT00940000154790.b.a.a	ENSGT00440000039837	ENSGT00940000153433.A.e #18	ENSGT00940000155747.g.b #15	ENSGT01030000234625.B.d.c.b #11	ENSGT00940000159745 #10	ENSGT00440000038430	ENSGT00940000173326	ENSGT00940000157269.a.a	ENSGT00940000158299.a	ENSGT00390000013853	ENSGT00940000160284	ENSGT00550000075009	ENSGT00390000017252
Climbing perch	MODERN SPECIES	15	ENSATEG00000008225	HINT3 (ENSATEG00000026864)	ENSATEG00000008155	ENSATEG00000027953	ENSATEG00000007294	ENSATEG00000007263	ENSATEG00000007202	ENSATEG00000007157	ENSATEG00000007206	ENSATEG00000007137	eif2b2 (ENSATEG00000007102)	tmed10 (ENSATEG00000027216)	fosab (ENSATEG00000006737) #7	ENSATEG00000006400	ENSATEG00000006378 #8	ENSATEG00000025438 #22	DLST (ENSATEG00000006339)	ENSATEG00000006311	YLPM1 (ENSATEG00000006214)	ENSATEG00000006182 #18	ENSATEG00000029956 #15	ENSATEG00000006072 #11	ENSATEG00000029792 #10	ENSATEG00000006018	ENSATEG00000005992	ptk2bb (ENSATEG00000005837)	ENSATEG00000005801	ENSATEG00000025379	nme6 (ENSATEG00000005750)	eif2b4 (ENSATEG00000005544)	atraid (ENSATEG00000005637)
Siamese fighting fish	MODERN SPECIES	13	ENSBSLG00000010745	ENSBSLG00000010642	ppp1r13bb (ENSBSLG00000009560)	ENSBSLG00000009534	daam1b (ENSBSLG00000009464)	L3HYPDH (ENSBSLG00000009452)	kcnh5a (ENSBSLG00000009363)	SGPP1 (ENSBSLG00000009354)	abcd4 (ENSBSLG00000008462)	vsx2 (ENSBSLG00000008381)	eif2b2 (ENSBSLG00000008254)	tmed10 (ENSBSLG00000008221)	fosab (ENSBSLG00000008210) #7	ENSBSLG00000008204	JDP2 (ENSBSLG00000008200) #8	ENSBSLG00000008123 #22	DLST (ENSBSLG00000007996)	ENSBSLG00000007977	YLPM1 (ENSBSLG00000007846)	esrrb (ENSBSLG00000007771) #18	TGFB3 (ENSBSLG00000007722) #15	ENSBSLG00000006790 #11	batf (ENSBSLG00000006452) #10	zc3h14 (ENSBSLG00000006376)	ENSBSLG00000006291	ptk2bb (ENSBSLG00000005909)	CHRNA2 (ENSBSLG00000005899)	ENSBSLG00000005895	nme6 (ENSBSLG00000005889)	eif2b4 (ENSBSLG00000005391)	atraid (ENSBSLG00000005291)
Zig-zag eel	MODERN SPECIES	16	ENSMAMG00000020489	ENSMAMG00000020482	ENSMAMG00000020447	ENSMAMG00000018056	ENSMAMG00000017978	ENSMAMG00000017966	ENSMAMG00000017947	ENSMAMG00000017937	ENSMAMG00000017858	ENSMAMG00000017836	eif2b2 (ENSMAMG00000017801)	tmed10 (ENSMAMG00000017781)	fosab (ENSMAMG00000024747) #7	ENSMAMG00000017536	ENSMAMG00000026076 #8	ENSMAMG00000017509 #22	DLST (ENSMAMG00000027751)	ENSMAMG00000017474	YLPM1 (ENSMAMG00000017450)	ENSMAMG00000017424 #18	ENSMAMG00000017415 #15	ENSMAMG00000025513 #11	ENSMAMG00000017405 #11	ENSMAMG00000017394 #10	ENSMAMG00000017380	ptk2bb (ENSMAMG00000017295)	ENSMAMG00000017183	ENSMAMG00000017175	nme6 (ENSMAMG00000028337)	eif2b4 (ENSMAMG00000017128)	atraid (ENSMAMG00000027046)
Cod	MODERN SPECIES	13	gata4 (ENSGMOG00000010832)	ENSGMOG00000010842	ENSGMOG00000010867	ENSGMOG00000010873	ENSGMOG00000010891	ENSGMOG00000010917	ENSGMOG00000010926	ENSGMOG00000010945	ENSGMOG00000010957	ENSGMOG00000010975	eif2b2 (ENSGMOG00000011032)	tmed10 (ENSGMOG00000011041)	fosab (ENSGMOG00000032190) #7	ENSGMOG00000011052	ENSGMOG00000011063 #8	ENSGMOG00000025816 #22	DLST (ENSGMOG00000011068)	ENSGMOG00000011081	YLPM1 (ENSGMOG00000011089)	ENSGMOG00000011117 #18	ENSGMOG00000011125 #15	ENSGMOG00000015362 #11	ENSGMOG00000011150 #10	ENSGMOG00000011154	ENSGMOG00000011202	ptk2bb (ENSGMOG00000011174)	ENSGMOG00000024131	ENSGMOG00000013065	nme6 (ENSGMOG00000013072)	eif2b4 (ENSGMOG00000013084)	atraid (ENSGMOG00000013100)
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000154297.A.h #22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000154297.A.h #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000154297.A.h #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000154297.A.h #22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000154297.A.h #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000154297.A.h #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000154297.A.h #22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000154297.A.h #22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00940000154297.A.h #22
Percomorphaceae_D	ANCESTRAL SPECIES																	ENSGT00940000154297.A.h #22
Carangaria	ANCESTRAL SPECIES																	ENSGT00940000154297.A.h #22
Carangaria_A	ANCESTRAL SPECIES																	ENSGT00940000154297.A.h #22
Seriola	ANCESTRAL SPECIES																	ENSGT00940000154297.A.h #22
Yellowtail amberjack	MODERN SPECIES	1445																ENSSLDG00000011946 #22