Murinae	ANCESTRAL SPECIES	1	ENSGT00930000150980.a	ENSGT00390000009987	ENSGT00390000010523.c.b #7	ENSGT00940000158904 #8	ENSGT01080000257365.b.a.a.b.a #9	ENSGT00950000183038.a.b.b.b #10	ENSGT00390000001718 #11	ENSGT00940000159241 #12	ENSGT01090000260082.d.a.a.a.b #13	ENSGT00530000063734.a #14	ENSGT00940000158842 #15	ENSGT00940000160160 #16	ENSGT00940000161094 #18	ENSGT00940000153988.A #19	ENSGT00940000155773.b #21	ENSGT00940000154574.d #22	ENSGT00940000155655.B #23	ENSGT00940000157230 #24	ENSGT00940000155359 #25	ENSGT00530000063836.a #26	ENSGT01050000244842.a.b.a #27	ENSGT01050000244842.a.b.b.a.a.a #28	ENSGT01050000244842.a.b.b.a.a.b #29	ENSGT01100000263555.a.a.a #30	ENSGT00940000156082 #31	ENSGT00390000008712 #32	ENSGT00730000111116 #33	ENSGT00940000156994 #34	ENSGT00940000156972 #35	ENSGT00940000161291 #36	ENSGT00390000005372 #37
Mus	ANCESTRAL SPECIES	1	ENSGT00390000009987	ENSGT00390000010523.c.b #7	ENSGT00940000158904 #8	ENSGT01080000257365.b.a.a.b.a #9	ENSGT00950000183038.a.b.b.b #10	ENSGT00390000001718 #11	ENSGT00940000159241 #12	ENSGT01090000260082.d.a.a.a.b #13	ENSGT00530000063734.a #14	ENSGT00940000158842 #15	ENSGT00860000136335 #17	ENSGT00940000160160 #16	ENSGT00940000161094 #18	ENSGT00940000153988.A #19	ENSGT00940000155773.b #21	ENSGT00940000154574.d #22	ENSGT00940000155655.B #23	ENSGT00940000157230 #24	ENSGT00940000155359 #25	ENSGT00530000063836.a #26	ENSGT01050000244842.a.b.a #27	ENSGT01050000244842.a.b.b.a.a.a #28	ENSGT01050000244842.a.b.b.a.a.b #29	ENSGT01100000263555.a.a.a #30	ENSGT00940000156082 #31	ENSGT00390000008712 #32	ENSGT00730000111116 #33	ENSGT00940000156994 #34	ENSGT00940000156972 #35	ENSGT00940000161291 #36	ENSGT00390000005372 #37
Mus_A	ANCESTRAL SPECIES		ENSGT00390000009987	ENSGT00390000010523.c.b #7	ENSGT00940000158904 #8	ENSGT01080000257365.b.a.a.b.a #9	ENSGT00950000183038.a.b.b.b #10	ENSGT00390000001718 #11	ENSGT00940000159241 #12	ENSGT01090000260082.d.a.a.a.b #13	ENSGT00530000063734.a #14	ENSGT00940000158842 #15	ENSGT00860000136335 #17	ENSGT00940000160160 #16	ENSGT00940000161094 #18	ENSGT00940000153988.A #19	ENSGT00940000155773.b #21	ENSGT00940000154574.d #22	ENSGT00940000155655.B #23	ENSGT00940000157230 #24	ENSGT00940000155359 #25	ENSGT00530000063836.a #26	ENSGT01050000244842.a.b.a #27	ENSGT01050000244842.a.b.b.a.a.a #28	ENSGT01050000244842.a.b.b.a.a.b #29	ENSGT01100000263555.a.a.a #30	ENSGT00940000156082 #31	ENSGT00390000008712 #32	ENSGT00730000111116 #33	ENSGT00940000156994 #34	ENSGT00940000156972 #35	ENSGT00940000161291 #36	ENSGT00390000005372 #37
Mus_B	ANCESTRAL SPECIES	1	ENSGT00390000009987	ENSGT00390000010523.c.b #7	ENSGT00940000158904 #8	ENSGT01080000257365.b.a.a.b.a #9	ENSGT00950000183038.a.b.b.b #10	ENSGT00390000001718 #11	ENSGT00940000159241 #12	ENSGT01090000260082.d.a.a.a.b #13	ENSGT00530000063734.a #14	ENSGT00940000158842 #15	ENSGT00860000136335 #17	ENSGT00940000160160 #16	ENSGT00940000161094 #18	ENSGT00940000153988.A #19	ENSGT00940000155773.b #21	ENSGT00940000154574.d #22	ENSGT00940000155655.B #23	ENSGT00940000157230 #24	ENSGT00940000155359 #25	ENSGT00530000063836.a #26	ENSGT01050000244842.a.b.a #27	ENSGT01050000244842.a.b.b.a.a.a #28	ENSGT01050000244842.a.b.b.a.a.b #29	ENSGT01100000263555.a.a.a #30	ENSGT00940000156082 #31	ENSGT00390000008712 #32	ENSGT00730000111116 #33	ENSGT00940000156994 #34	ENSGT00940000156972 #35	ENSGT00940000161291 #36	ENSGT00390000005372 #37
Mus_C	ANCESTRAL SPECIES		ENSGT00390000009987	ENSGT00390000010523.c.b #7	ENSGT00940000158904 #8	ENSGT01080000257365.b.a.a.b.a #9	ENSGT00950000183038.a.b.b.b #10	ENSGT00390000001718 #11	ENSGT00940000159241 #12	ENSGT01090000260082.d.a.a.a.b #13	ENSGT00530000063734.a #14	ENSGT00940000158842 #15	ENSGT00860000136335 #17	ENSGT00940000160160 #16	ENSGT00940000161094 #18	ENSGT00940000153988.A #19	ENSGT00940000155773.b #21	ENSGT00940000154574.d #22	ENSGT00940000155655.B #23	ENSGT00940000157230 #24	ENSGT00940000155359 #25	ENSGT00530000063836.a #26	ENSGT01050000244842.a.b.a #27	ENSGT01050000244842.a.b.b.a.a.a #28	ENSGT01050000244842.a.b.b.a.a.b #29	ENSGT01100000263555.a.a.a #30	ENSGT00940000156082 #31	ENSGT00390000008712 #32	ENSGT00730000111116 #33	ENSGT00940000156994 #34	ENSGT00940000156972 #35	ENSGT00940000161291 #36	ENSGT00390000005372 #37
spretus	MODERN SPECIES	11	Rprm (MGP_SPRETEiJ_G0024484) #7	Galnt13 (MGP_SPRETEiJ_G0024485) #8	Kcnj3 (MGP_SPRETEiJ_G0024486) #9	Nr4a2 (MGP_SPRETEiJ_G0024487) #10	Gpd2 (MGP_SPRETEiJ_G0024488) #11	Galnt5 (MGP_SPRETEiJ_G0024489) #12	Ermn (MGP_SPRETEiJ_G0024490) #13	Cytip (MGP_SPRETEiJ_G0024491) #14	Acvr1c (MGP_SPRETEiJ_G0024492) #15	Acvr1 (MGP_SPRETEiJ_G0024493) #16	MGP_SPRETEiJ_G0024494 #17	Upp2 (MGP_SPRETEiJ_G0024495) #18	Ccdc148 (MGP_SPRETEiJ_G0024496) #19	MGP_SPRETEiJ_G0024497 #20	Pkp4 (MGP_SPRETEiJ_G0024498) #21	Dapl1 (MGP_SPRETEiJ_G0024499) #22	Tanc1 (MGP_SPRETEiJ_G0024500) #23	Wdsub1 (MGP_SPRETEiJ_G0024501) #24	Baz2b (MGP_SPRETEiJ_G0024502) #25	Marchf7 (MGP_SPRETEiJ_G0024503) #26	Cd302 (MGP_SPRETEiJ_G0024504) #27	Ly75 (MGP_SPRETEiJ_G0024505) #28	Pla2r1 (MGP_SPRETEiJ_G0024506) #29	Itgb6 (MGP_SPRETEiJ_G0024507) #30	Rbms1 (MGP_SPRETEiJ_G0024508) #31	Tank (MGP_SPRETEiJ_G0024509) #32	Psmd14 (MGP_SPRETEiJ_G0024510) #33	Tbr1 (MGP_SPRETEiJ_G0024511) #34	Slc4a10 (MGP_SPRETEiJ_G0024512) #35	Dpp4 (MGP_SPRETEiJ_G0024513) #36	Gcg (MGP_SPRETEiJ_G0024514) #37
Steppe mouse	MODERN SPECIES	3254			Galnt5 (ENSMSIG00000001380) #12	Ermn (ENSMSIG00000001436) #13	Cytip (ENSMSIG00000001449) #14	Acvr1c (ENSMSIG00000001491) #15	Acvr1 (ENSMSIG00000001643) #16	ENSMSIG00000001678	Upp2 (ENSMSIG00000001709) #18	Ccdc148 (ENSMSIG00000001814) #19	ENSMSIG00000001865	Pkp4 (ENSMSIG00000001926) #21	ENSMSIG00000002790	ENSMSIG00000002808	ENSMSIG00000002816	Dapl1 (ENSMSIG00000002836) #22	Tanc1 (ENSMSIG00000002882) #23	ENSMSIG00000003299	ENSMSIG00000003347	ENSMSIG00000003352	Wdsub1 (ENSMSIG00000003389) #24	Baz2b (ENSMSIG00000003509) #25	ENSMSIG00000004135	ENSMSIG00000004156	Marchf7 (ENSMSIG00000004194) #26	Cd302 (ENSMSIG00000004320) #27	Ly75 (ENSMSIG00000004350) #28	Pla2r1 (ENSMSIG00000004518) #29	Itgb6 (ENSMSIG00000004664) #30	Rbms1 (ENSMSIG00000004771) #31	ENSMSIG00000005083
Mouse	MODERN SPECIES	11	Prpf40a (ENSMUSG00000061136)	Arl6ip6 (ENSMUSG00000026960)	Rprm (ENSMUSG00000075334) #7	Galnt13 (ENSMUSG00000060988) #8	Kcnj3 (ENSMUSG00000026824) #9	Nr4a2 (ENSMUSG00000026826) #10	Gpd2 (ENSMUSG00000026827) #11	Galnt5 (ENSMUSG00000026828) #12	Ermn (ENSMUSG00000026830) #13	Cytip (ENSMUSG00000026832) #14	Acvr1c (ENSMUSG00000026834) #15	Acvr1 (ENSMUSG00000026836) #16	Upp2 (ENSMUSG00000026839) #18	Ccdc148 (ENSMUSG00000036641) #19	Pkp4 (ENSMUSG00000026991) #21	Dapl1 (ENSMUSG00000026989) #22	Tanc1 (ENSMUSG00000035168) #23	Wdsub1 (ENSMUSG00000026988) #24	Baz2b (ENSMUSG00000026987) #25	Marchf7 (ENSMUSG00000026977) #26	Cd302 (ENSMUSG00000060703) #27	Ly75 (ENSMUSG00000026980) #28	Pla2r1 (ENSMUSG00000054580) #29	Itgb6 (ENSMUSG00000026971) #30	Rbms1 (ENSMUSG00000026970) #31	Tank (ENSMUSG00000064289) #32	Psmd14 (ENSMUSG00000026914) #33	Tbr1 (ENSMUSG00000035033) #34	Slc4a10 (ENSMUSG00000026904) #35	Dpp4 (ENSMUSG00000035000) #36	Gcg (ENSMUSG00000000394) #37
Ryukyu mouse	MODERN SPECIES	11	Arl6ip6 (MGP_CAROLIEiJ_G0023562)	Rprm (MGP_CAROLIEiJ_G0023563) #7	Galnt13 (MGP_CAROLIEiJ_G0023564) #8	Kcnj3 (MGP_CAROLIEiJ_G0023565) #9	Nr4a2 (MGP_CAROLIEiJ_G0023566) #10	Gpd2 (MGP_CAROLIEiJ_G0023567) #11	Galnt5 (MGP_CAROLIEiJ_G0023568) #12	Ermn (MGP_CAROLIEiJ_G0023569) #13	Cytip (MGP_CAROLIEiJ_G0023570) #14	Acvr1c (MGP_CAROLIEiJ_G0023571) #15	Acvr1 (MGP_CAROLIEiJ_G0023572) #16	MGP_CAROLIEiJ_G0023573 #17	Upp2 (MGP_CAROLIEiJ_G0023574) #18	Ccdc148 (MGP_CAROLIEiJ_G0023575) #19	Pkp4 (MGP_CAROLIEiJ_G0023576) #21	Dapl1 (MGP_CAROLIEiJ_G0023577) #22	Tanc1 (MGP_CAROLIEiJ_G0023578) #23	Wdsub1 (MGP_CAROLIEiJ_G0023579) #24	Baz2b (MGP_CAROLIEiJ_G0023580) #25	Marchf7 (MGP_CAROLIEiJ_G0023581) #26	Cd302 (MGP_CAROLIEiJ_G0023582) #27	Ly75 (MGP_CAROLIEiJ_G0023583) #28	Pla2r1 (MGP_CAROLIEiJ_G0023584) #29	Itgb6 (MGP_CAROLIEiJ_G0023585) #30	Rbms1 (MGP_CAROLIEiJ_G0023586) #31	Tank (MGP_CAROLIEiJ_G0023587) #32	Psmd14 (MGP_CAROLIEiJ_G0023588) #33	Tbr1 (MGP_CAROLIEiJ_G0023589) #34	Slc4a10 (MGP_CAROLIEiJ_G0023590) #35	Dpp4 (MGP_CAROLIEiJ_G0023591) #36	Gcg (MGP_CAROLIEiJ_G0023592) #37
Shrew mouse	MODERN SPECIES	16	Arl6ip6 (MGP_PahariEiJ_G0025013)	Rprm (MGP_PahariEiJ_G0025014) #7	Galnt13 (MGP_PahariEiJ_G0025015) #8	Kcnj3 (MGP_PahariEiJ_G0025016) #9	Nr4a2 (MGP_PahariEiJ_G0025017) #10	Gpd2 (MGP_PahariEiJ_G0025018) #11	Galnt5 (MGP_PahariEiJ_G0025019) #12	Ermn (MGP_PahariEiJ_G0025020) #13	Cytip (MGP_PahariEiJ_G0025021) #14	Acvr1c (MGP_PahariEiJ_G0025022) #15	Acvr1 (MGP_PahariEiJ_G0025023) #16	MGP_PahariEiJ_G0025024 #17	Upp2 (MGP_PahariEiJ_G0025025) #18	Ccdc148 (MGP_PahariEiJ_G0025026) #19	Pkp4 (MGP_PahariEiJ_G0025027) #21	Dapl1 (MGP_PahariEiJ_G0025028) #22	Tanc1 (MGP_PahariEiJ_G0025029) #23	Wdsub1 (MGP_PahariEiJ_G0025030) #24	Baz2b (MGP_PahariEiJ_G0025031) #25	Marchf7 (MGP_PahariEiJ_G0025032) #26	Cd302 (MGP_PahariEiJ_G0025033) #27	Ly75 (MGP_PahariEiJ_G0025034) #28	Pla2r1 (MGP_PahariEiJ_G0025035) #29	Itgb6 (MGP_PahariEiJ_G0025036) #30	Rbms1 (MGP_PahariEiJ_G0025037) #31	Tank (MGP_PahariEiJ_G0025038) #32	Psmd14 (MGP_PahariEiJ_G0025039) #33	Tbr1 (MGP_PahariEiJ_G0025040) #34	Slc4a10 (MGP_PahariEiJ_G0025041) #35	Dpp4 (MGP_PahariEiJ_G0025042) #36	Gcg (MGP_PahariEiJ_G0025043) #37
Rat	MODERN SPECIES	13	Rprm (ENSRNOG00000005109) #7	Galnt13 (ENSRNOG00000005335) #8	ENSRNOG00000065543	Kcnj3 (ENSRNOG00000005369) #9	Nr4a2 (ENSRNOG00000005600) #10	Gpd2 (ENSRNOG00000033824) #11	Galnt5 (ENSRNOG00000004645) #12	Ermn (ENSRNOG00000021472) #13	Cytip (ENSRNOG00000004772) #14	Acvr1c (ENSRNOG00000004828) #15	Acvr1 (ENSRNOG00000005033) #16	Gapdh-ps1 (ENSRNOG00000071205)	Upp2 (ENSRNOG00000005341) #18	Ccdc148 (ENSRNOG00000057740) #19	Pkp4 (ENSRNOG00000005504) #21	Dapl1 (ENSRNOG00000005743) #22	ENSRNOG00000064239	Tanc1 (ENSRNOG00000025394) #23	Wdsub1 (ENSRNOG00000005990) #24	Baz2b (ENSRNOG00000056984) #25	LOC100361645 (ENSRNOG00000031951)	Marchf7 (ENSRNOG00000006241) #26	Cd302 (ENSRNOG00000006623) #27	Ly75 (ENSRNOG00000007012) #28	Pla2r1 (ENSRNOG00000008129) #29	Itgb6 (ENSRNOG00000008346) #30	Rbms1 (ENSRNOG00000008482) #31	ENSRNOG00000065937	Tank (ENSRNOG00000008859) #32	Psmd14 (ENSRNOG00000061129) #33	Tbr1 (ENSRNOG00000005049) #34