Hystricomorpha_a	ANCESTRAL SPECIES	67	ENSGT00860000133854	ENSGT00940000154319.v #7	ENSGT00940000153534.A.t.a #8	ENSGT00940000156449 #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642	ENSGT00940000158781 #26	ENSGT00940000162403	ENSGT00530000063410.b #27	ENSGT01030000234607.A.b #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b #32	ENSGT00940000162639 #33	ENSGT00940000159743 #34	ENSGT00940000159232.h.b #35
Guinea pig	MODERN SPECIES	13	SUMO1 (ENSCPOG00000039864) #7	NOP58 (ENSCPOG00000030510) #8	BMPR2 (ENSCPOG00000009586) #9	ICA1L (ENSCPOG00000009349) #10	WDR12 (ENSCPOG00000008824) #11	CARF (ENSCPOG00000008827) #12	NBEAL1 (ENSCPOG00000008009) #13	CYP20A1 (ENSCPOG00000009758) #14	ABI2 (ENSCPOG00000007562) #15	RAPH1 (ENSCPOG00000020239) #16	CD28 (ENSCPOG00000035938) #17	CTLA4 (ENSCPOG00000019534) #18	ICOS (ENSCPOG00000030931) #19	ENSCPOG00000030358 #20	PARD3B (ENSCPOG00000004380) #21	NRP2 (ENSCPOG00000004390) #22	ENSCPOG00000010964 #23	NDUFS1 (ENSCPOG00000005555) #24	EEF1B2 (ENSCPOG00000014496) #25	ADAM23 (ENSCPOG00000005871) #26	MDH1B (ENSCPOG00000005608) #27	FASTKD2 (ENSCPOG00000005624) #28	KLF7 (ENSCPOG00000009080) #29	CREB1 (ENSCPOG00000010778) #30	METTL21A (ENSCPOG00000034803) #31	ENSCPOG00000035156 #32	FZD5 (ENSCPOG00000038146) #33	PLEKHM3 (ENSCPOG00000004119) #34	CRYGC (ENSCPOG00000000186) #35	ENSCPOG00000022025 #36	CRYGA (ENSCPOG00000015047) #37
Hystricomorpha_b	ANCESTRAL SPECIES	52	ENSGT00860000133854	ENSGT00940000154319.v #7	ENSGT00940000153534.A.t.a #8	ENSGT00940000156449 #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642	ENSGT00940000158781 #26	ENSGT00940000162403	ENSGT00530000063410.b #27	ENSGT01030000234607.A.b #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b #32	ENSGT00940000162639 #33	ENSGT00940000159743 #34	ENSGT00940000159232.h.b #35
Long-tailed chinchilla	MODERN SPECIES	164	ICA1L (ENSCLAG00000005015) #10	WDR12 (ENSCLAG00000004491) #11	CARF (ENSCLAG00000007915) #12	ENSCLAG00000007700	ENSCLAG00000006700	NBEAL1 (ENSCLAG00000005102) #13	CYP20A1 (ENSCLAG00000004163) #14	ENSCLAG00000006025	ENSCLAG00000004760	ABI2 (ENSCLAG00000004021) #15	ENSCLAG00000003175 #16	CD28 (ENSCLAG00000004670) #17	CTLA4 (ENSCLAG00000004042) #18	ICOS (ENSCLAG00000003964) #19	PARD3B (ENSCLAG00000010240) #21	NRP2 (ENSCLAG00000009120) #22	INO80D (ENSCLAG00000006191) #23	NDUFS1 (ENSCLAG00000009634) #24	EEF1B2 (ENSCLAG00000009181) #25	CMKLR2 (ENSCLAG00000008973)	ENSCLAG00000008490	ATXN3L (ENSCLAG00000005825)	ADAM23 (ENSCLAG00000004674) #26	DYTN (ENSCLAG00000003705)	MDH1B (ENSCLAG00000003385) #27	FASTKD2 (ENSCLAG00000007036) #28	KLF7 (ENSCLAG00000006083) #29	CREB1 (ENSCLAG00000005853) #30	METTL21A (ENSCLAG00000005572) #31	ENSCLAG00000005432	ENSCLAG00000004502 #32
Degu	MODERN SPECIES	57	ENSODEG00000009897	ENSODEG00000011455	WDR12 (ENSODEG00000011602) #11	CARF (ENSODEG00000011312) #12	NBEAL1 (ENSODEG00000010440) #13	CYP20A1 (ENSODEG00000010253) #14	ENSODEG00000009779	ABI2 (ENSODEG00000009457) #15	ENSODEG00000013477 #16	CTLA4 (ENSODEG00000009327) #18	ENSODEG00000010295	ICOS (ENSODEG00000011327) #19	ENSODEG00000009131	ENSODEG00000010021	PARD3B (ENSODEG00000012523) #21	ENSODEG00000010455 #22	INO80D (ENSODEG00000009769) #23	ENSODEG00000019630	ENSODEG00000008842 #24	ENSODEG00000009030 #24	ENSODEG00000008974 #24	ENSODEG00000010229 #25	ENSODEG00000019757	ADAM23 (ENSODEG00000011161) #26	DYTN (ENSODEG00000009029)	MDH1B (ENSODEG00000009494) #27	FASTKD2 (ENSODEG00000009880) #28	KLF7 (ENSODEG00000010345) #29	ENSODEG00000009956	ENSODEG00000009302	CREB1 (ENSODEG00000010264) #30