Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000176171	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT01090000263468	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT01090000260046	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.b
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Glires	ANCESTRAL SPECIES	14	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Rodentia	ANCESTRAL SPECIES	14	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.b
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.b
Marmotini	ANCESTRAL SPECIES	2	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.g #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.b
Alpin marmot	MODERN SPECIES	8	ENSMMMG00000013017 #7	ENSMMMG00000013051 #8	ENSMMMG00000013060 #9	ICA1L (ENSMMMG00000013064) #10	WDR12 (ENSMMMG00000013110) #11	CARF (ENSMMMG00000013161) #12	NBEAL1 (ENSMMMG00000013229) #13	CYP20A1 (ENSMMMG00000013312) #14	ABI2 (ENSMMMG00000013329) #15	ENSMMMG00000013568 #16	CD28 (ENSMMMG00000013599) #17	CTLA4 (ENSMMMG00000013609) #18	ICOS (ENSMMMG00000013624) #19	PARD3B (ENSMMMG00000013680) #20	ENSMMMG00000013911 #21	NRP2 (ENSMMMG00000013924) #22	INO80D (ENSMMMG00000014555) #23	NDUFS1 (ENSMMMG00000014566) #24	ENSMMMG00000014596 #25	CMKLR2 (ENSMMMG00000014632) #26	ZDBF2 (ENSMMMG00000014650) #27	ADAM23 (ENSMMMG00000014678) #28	FAM237A (ENSMMMG00000014819) #29	DYTN (ENSMMMG00000014828) #30	ENSMMMG00000014844 #31	MDH1B (ENSMMMG00000014852) #32	FASTKD2 (ENSMMMG00000014857) #33	CPO (ENSMMMG00000014874) #34	KLF7 (ENSMMMG00000014897) #35	CREB1 (ENSMMMG00000014914) #36	METTL21A (ENSMMMG00000015010) #37
Marmotini_b	ANCESTRAL SPECIES	103	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.g #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.b
Squirrel	MODERN SPECIES	231										ABI2 (ENSSTOG00000015888) #15	RAPH1 (ENSSTOG00000028594) #16	CD28 (ENSSTOG00000026213) #17	CTLA4 (ENSSTOG00000020540) #18	ICOS (ENSSTOG00000013542) #19	PARD3B (ENSSTOG00000010207) #20	NRP2 (ENSSTOG00000010229) #22	INO80D (ENSSTOG00000028419) #23	NDUFS1 (ENSSTOG00000010255) #24	EEF1B2 (ENSSTOG00000005437) #25	CMKLR2 (ENSSTOG00000005452) #26	ZDBF2 (ENSSTOG00000001663) #27	ADAM23 (ENSSTOG00000024094) #28	DYTN (ENSSTOG00000019822) #30	MDH1B (ENSSTOG00000003194) #32	FASTKD2 (ENSSTOG00000022821) #33	CPO (ENSSTOG00000013351) #34	KLF7 (ENSSTOG00000011069) #35	CREB1 (ENSSTOG00000016482) #36	METTL21A (ENSSTOG00000016483) #37	ENSSTOG00000021511	CCNYL1 (ENSSTOG00000016484)
Arctic ground squirrel	MODERN SPECIES	141								CYP20A1 (ENSUPAG00010007092) #14	ABI2 (ENSUPAG00010007107) #15	RAPH1 (ENSUPAG00010007232) #16	ENSUPAG00010007347	CD28 (ENSUPAG00010007360) #17	CTLA4 (ENSUPAG00010007371) #18	ICOS (ENSUPAG00010007386) #19	PARD3B (ENSUPAG00010007426) #20	NRP2 (ENSUPAG00010007567) #22	INO80D (ENSUPAG00010007624) #23	NDUFS1 (ENSUPAG00010007661) #24	EEF1B2 (ENSUPAG00010007678) #25	CMKLR2 (ENSUPAG00010007707) #26	ZDBF2 (ENSUPAG00010007725) #27	ADAM23 (ENSUPAG00010007731) #28	FAM237A (ENSUPAG00010007856) #29	DYTN (ENSUPAG00010007862) #30	MDH1B (ENSUPAG00010007886) #32	FASTKD2 (ENSUPAG00010007916) #33	CPO (ENSUPAG00010007941) #34	KLF7 (ENSUPAG00010007967) #35	CREB1 (ENSUPAG00010007984) #36	METTL21A (ENSUPAG00010008009) #37	CCNYL1 (ENSUPAG00010008021)
Eurasian red squirrel	MODERN SPECIES	12	ENSSVLG00005000362	BMPR2 (ENSSVLG00005000484)	ENSSVLG00005000534 #9	ENSSVLG00005000554	ENSSVLG00005000579 #10	WDR12 (ENSSVLG00005000598) #11	ENSSVLG00005000686 #12	ENSSVLG00005000784	NBEAL1 (ENSSVLG00005000853) #13	CYP20A1 (ENSSVLG00005000970) #14	ABI2 (ENSSVLG00005001071) #15	CD28 (ENSSVLG00005001473) #17	CTLA4 (ENSSVLG00005001529) #18	ICOS (ENSSVLG00005001570) #19	PARD3B (ENSSVLG00005001789) #20	NRP2 (ENSSVLG00005002141) #22	INO80D (ENSSVLG00005002283) #23	ENSSVLG00005002396 #24	ENSSVLG00005002606 #25	CMKLR2 (ENSSVLG00005002631) #26	ENSSVLG00005002653 #27	ADAM23 (ENSSVLG00005002721) #28	FAM237A (ENSSVLG00005002854) #29	DYTN (ENSSVLG00005002873) #30	MDH1B (ENSSVLG00005002924) #32	FASTKD2 (ENSSVLG00005002985) #33	CPO (ENSSVLG00005003015) #34	KLF7 (ENSSVLG00005003049) #35	CREB1 (ENSSVLG00005003093) #36	METTL21A (ENSSVLG00005003134) #37	ENSSVLG00005003181
Hystricomorpha	ANCESTRAL SPECIES	28	ENSGT00940000154319.v	ENSGT00940000153534.A.t.a	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b	ENSGT00940000162639
Naked mole-rat female	MODERN SPECIES	17	ENSHGLG00000004722	ENSHGLG00000020889	CARF (ENSHGLG00000007326) #12	ENSHGLG00000037622	NBEAL1 (ENSHGLG00000004471) #13	CYP20A1 (ENSHGLG00000050312) #14	ABI2 (ENSHGLG00000007481) #15	ENSHGLG00000005031 #16	CD28 (ENSHGLG00000037192) #17	CTLA4 (ENSHGLG00000009115) #18	ICOS (ENSHGLG00000008777) #19	ENSHGLG00000043313	ENSHGLG00000016877	ENSHGLG00000048100	PARD3B (ENSHGLG00000004982) #20	NRP2 (ENSHGLG00000010562) #22	ENSHGLG00000049876	INO80D (ENSHGLG00000018537) #23	NDUFS1 (ENSHGLG00000015179) #24	EEF1B2 (ENSHGLG00000015147) #25	ENSHGLG00000045433	CMKLR2 (ENSHGLG00000046982) #26	ENSHGLG00000044712 #27	ADAM23 (ENSHGLG00000006393) #28	FAM237A (ENSHGLG00000030355) #29	ENSHGLG00000005368	MDH1B (ENSHGLG00000004936) #32	FASTKD2 (ENSHGLG00000004761) #33	ENSHGLG00000045814	KLF7 (ENSHGLG00000044157) #35	ENSHGLG00000017319
Hystricomorpha_a	ANCESTRAL SPECIES	67	ENSGT00860000133854	ENSGT00940000154319.v	ENSGT00940000153534.A.t.a	ENSGT00940000156449	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b	ENSGT00940000162639	ENSGT00940000159743	ENSGT00940000159232.h.b
Guinea pig	MODERN SPECIES	13	SUMO1 (ENSCPOG00000039864)	NOP58 (ENSCPOG00000030510)	BMPR2 (ENSCPOG00000009586)	ICA1L (ENSCPOG00000009349) #10	WDR12 (ENSCPOG00000008824) #11	CARF (ENSCPOG00000008827) #12	NBEAL1 (ENSCPOG00000008009) #13	CYP20A1 (ENSCPOG00000009758) #14	ABI2 (ENSCPOG00000007562) #15	RAPH1 (ENSCPOG00000020239) #16	CD28 (ENSCPOG00000035938) #17	CTLA4 (ENSCPOG00000019534) #18	ICOS (ENSCPOG00000030931) #19	ENSCPOG00000030358	PARD3B (ENSCPOG00000004380) #20	NRP2 (ENSCPOG00000004390) #22	ENSCPOG00000010964 #23	NDUFS1 (ENSCPOG00000005555) #24	EEF1B2 (ENSCPOG00000014496) #25	ADAM23 (ENSCPOG00000005871) #28	MDH1B (ENSCPOG00000005608) #32	FASTKD2 (ENSCPOG00000005624) #33	KLF7 (ENSCPOG00000009080) #35	CREB1 (ENSCPOG00000010778) #36	METTL21A (ENSCPOG00000034803) #37	ENSCPOG00000035156	FZD5 (ENSCPOG00000038146)	PLEKHM3 (ENSCPOG00000004119)	CRYGC (ENSCPOG00000000186)	ENSCPOG00000022025	CRYGA (ENSCPOG00000015047)
Hystricomorpha_b	ANCESTRAL SPECIES	52	ENSGT00860000133854	ENSGT00940000154319.v	ENSGT00940000153534.A.t.a	ENSGT00940000156449	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b	ENSGT00940000162639	ENSGT00940000159743	ENSGT00940000159232.h.b
Long-tailed chinchilla	MODERN SPECIES	164	ICA1L (ENSCLAG00000005015) #10	WDR12 (ENSCLAG00000004491) #11	CARF (ENSCLAG00000007915) #12	ENSCLAG00000007700	ENSCLAG00000006700	NBEAL1 (ENSCLAG00000005102) #13	CYP20A1 (ENSCLAG00000004163) #14	ENSCLAG00000006025	ENSCLAG00000004760	ABI2 (ENSCLAG00000004021) #15	ENSCLAG00000003175 #16	CD28 (ENSCLAG00000004670) #17	CTLA4 (ENSCLAG00000004042) #18	ICOS (ENSCLAG00000003964) #19	PARD3B (ENSCLAG00000010240) #20	NRP2 (ENSCLAG00000009120) #22	INO80D (ENSCLAG00000006191) #23	NDUFS1 (ENSCLAG00000009634) #24	EEF1B2 (ENSCLAG00000009181) #25	CMKLR2 (ENSCLAG00000008973) #26	ENSCLAG00000008490	ATXN3L (ENSCLAG00000005825)	ADAM23 (ENSCLAG00000004674) #28	DYTN (ENSCLAG00000003705) #30	MDH1B (ENSCLAG00000003385) #32	FASTKD2 (ENSCLAG00000007036) #33	KLF7 (ENSCLAG00000006083) #35	CREB1 (ENSCLAG00000005853) #36	METTL21A (ENSCLAG00000005572) #37	ENSCLAG00000005432	ENSCLAG00000004502
Degu	MODERN SPECIES	57	ENSODEG00000009897	ENSODEG00000011455	WDR12 (ENSODEG00000011602) #11	CARF (ENSODEG00000011312) #12	NBEAL1 (ENSODEG00000010440) #13	CYP20A1 (ENSODEG00000010253) #14	ENSODEG00000009779	ABI2 (ENSODEG00000009457) #15	ENSODEG00000013477 #16	CTLA4 (ENSODEG00000009327) #18	ENSODEG00000010295	ICOS (ENSODEG00000011327) #19	ENSODEG00000009131	ENSODEG00000010021	PARD3B (ENSODEG00000012523) #20	ENSODEG00000010455 #22	INO80D (ENSODEG00000009769) #23	ENSODEG00000019630	ENSODEG00000008842 #24	ENSODEG00000009030 #24	ENSODEG00000008974 #24	ENSODEG00000010229 #25	ENSODEG00000019757	ADAM23 (ENSODEG00000011161) #28	DYTN (ENSODEG00000009029) #30	MDH1B (ENSODEG00000009494) #32	FASTKD2 (ENSODEG00000009880) #33	KLF7 (ENSODEG00000010345) #35	ENSODEG00000009956	ENSODEG00000009302	CREB1 (ENSODEG00000010264) #36
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Myomorpha	ANCESTRAL SPECIES	10	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Muroidea	ANCESTRAL SPECIES	20	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a	ENSGT00940000162639
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a	ENSGT00940000162639
Cricetidae	ANCESTRAL SPECIES	19	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a	ENSGT00940000162639
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a	ENSGT00940000162639
Chinese hamster chok1gshd	MODERN SPECIES	1	Nop58 (ENSCGRG00001017869)	ENSCGRG00001009737	Bmpr2 (ENSCGRG00001020694)	Fam117b (ENSCGRG00001020456) #9	Ica1l (ENSCGRG00001018928) #10	WDR12 (ENSCGRG00001016494) #11	Carf (ENSCGRG00001016848) #12	Nbeal1 (ENSCGRG00001018313) #13	Cyp20a1 (ENSCGRG00001018508) #14	Abi2 (ENSCGRG00001017572) #15	Raph1 (ENSCGRG00001019075) #16	Cd28 (ENSCGRG00001021553) #17	Ctla4 (ENSCGRG00001017244) #18	Icos (ENSCGRG00001016804) #19	Pard3b (ENSCGRG00001023180) #20	Nrp2 (ENSCGRG00001001140) #22	Ino80d (ENSCGRG00001020225) #23	Ndufs1 (ENSCGRG00001018185) #24	Eef1b2 (ENSCGRG00001017503) #25	Cmklr2 (ENSCGRG00001010463) #26	Zdbf2 (ENSCGRG00001018156) #27	Adam23 (ENSCGRG00001021362) #28	Gm39653 (ENSCGRG00001017288) #29	Dytn (ENSCGRG00001017611) #30	Mdh1b (ENSCGRG00001017642) #32	Fastkd2 (ENSCGRG00001020432) #33	Klf7 (ENSCGRG00001018794) #35	ENSCGRG00001018665	Creb1 (ENSCGRG00001018838) #36	Mettl21a (ENSCGRG00001017438) #37	Ccnyl1 (ENSCGRG00001017467)
Golden Hamster	MODERN SPECIES	640	Nop58 (ENSMAUG00000009734)	Bmpr2 (ENSMAUG00000009115)	Fam117b (ENSMAUG00000017770) #9	Ica1l (ENSMAUG00000013926) #10	Wdr12 (ENSMAUG00000001279) #11	Carf (ENSMAUG00000009693) #12	ENSMAUG00000007926 #13	ENSMAUG00000001805 #13	ENSMAUG00000007020 #14	Abi2 (ENSMAUG00000016724) #15	ENSMAUG00000008616 #16	Cd28 (ENSMAUG00000020132) #17	Ctla4 (ENSMAUG00000017208) #18	Icos (ENSMAUG00000019187) #19	Pard3b (ENSMAUG00000019516) #20	Nrp2 (ENSMAUG00000020662) #22	Ino80d (ENSMAUG00000012087) #23	ENSMAUG00000017015 #24	Eef1b2 (ENSMAUG00000011478) #25	Cmklr2 (ENSMAUG00000009931) #26	Zdbf2 (ENSMAUG00000017491) #27	Adam23 (ENSMAUG00000012410) #28	Dytn (ENSMAUG00000021422) #30	Mdh1b (ENSMAUG00000016431) #32	Fastkd2 (ENSMAUG00000009136) #33	Klf7 (ENSMAUG00000022037) #35	Creb1 (ENSMAUG00000018215) #36	Mettl21a (ENSMAUG00000020877) #37	Fzd5 (ENSMAUG00000022033)	Plekhm3 (ENSMAUG00000021638)	ENSMAUG00000022028
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a	ENSGT00940000162639
Northern American deer mouse	MODERN SPECIES	4	Bmpr2 (ENSPEMG00000022646)	Fam117b (ENSPEMG00000011700) #9	ENSPEMG00000024187	Ica1l (ENSPEMG00000021278) #10	Wdr12 (ENSPEMG00000022189) #11	Carf (ENSPEMG00000020983) #12	ENSPEMG00000028509	Nbeal1 (ENSPEMG00000029402) #13	Cyp20a1 (ENSPEMG00000023627) #14	Abi2 (ENSPEMG00000020443) #15	Raph1 (ENSPEMG00000022086) #16	Cd28 (ENSPEMG00000028537) #17	Ctla4 (ENSPEMG00000020722) #18	Icos (ENSPEMG00000015472) #19	Pard3b (ENSPEMG00000020745) #20	Nrp2 (ENSPEMG00000020944) #22	Ino80d (ENSPEMG00000020652) #23	Ndufs1 (ENSPEMG00000020453) #24	Eef1b2 (ENSPEMG00000016842) #25	Cmklr2 (ENSPEMG00000000909) #26	Zdbf2 (ENSPEMG00000029531) #27	Adam23 (ENSPEMG00000020455) #28	Gm39653 (ENSPEMG00000029994) #29	Dytn (ENSPEMG00000020630) #30	Mdh1b (ENSPEMG00000012142) #32	Fastkd2 (ENSPEMG00000010593) #33	ENSPEMG00000029845	Klf7 (ENSPEMG00000028836) #35	Creb1 (ENSPEMG00000012416) #36	Mettl21a (ENSPEMG00000027520) #37	Ccnyl1 (ENSPEMG00000022762)
Prairie vole	MODERN SPECIES	354	Daw1 (ENSMOCG00000014056)	Sphkap (ENSMOCG00000010348)	Pid1 (ENSMOCG00000022904)	Dner (ENSMOCG00000020102)	Trip12 (ENSMOCG00000021899)	Fbxo36 (ENSMOCG00000015360)	Slc16a14 (ENSMOCG00000006969)	Nbeal1 (ENSMOCG00000015319) #13	Abi2 (ENSMOCG00000013762) #15	Raph1 (ENSMOCG00000016577) #16	Cd28 (ENSMOCG00000003240) #17	Ctla4 (ENSMOCG00000018484) #18	ENSMOCG00000017292	Icos (ENSMOCG00000008578) #19	Pard3b (ENSMOCG00000021107) #20	Nrp2 (ENSMOCG00000018160) #22	Ino80d (ENSMOCG00000022487) #23	Ndufs1 (ENSMOCG00000018918) #24	Eef1b2 (ENSMOCG00000004803) #25	Zdbf2 (ENSMOCG00000021962) #27	Adam23 (ENSMOCG00000012227) #28	ENSMOCG00000001238	Dytn (ENSMOCG00000015652) #30	Mdh1b (ENSMOCG00000001314) #32	Fastkd2 (ENSMOCG00000019859) #33	ENSMOCG00000008631	Klf7 (ENSMOCG00000009593) #35	Creb1 (ENSMOCG00000002192) #36	Mettl21a (ENSMOCG00000017410) #37	Ccnyl1 (ENSMOCG00000016018)	Fzd5 (ENSMOCG00000013581)
Murinae	ANCESTRAL SPECIES	9	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a	ENSGT00940000162639
Mus	ANCESTRAL SPECIES	5	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00860000135862	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00860000135862	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a.c
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089.l #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00860000135862	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a.c
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089.l #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00860000135862	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a.c
spretus	MODERN SPECIES		Sumo1 (MGP_SPRETEiJ_G0014987)	Nop58 (MGP_SPRETEiJ_G0014988)	Bmpr2 (MGP_SPRETEiJ_G0014989)	MGP_SPRETEiJ_G0014990 ##9	Ica1l (MGP_SPRETEiJ_G0014991) #10	Wdr12 (MGP_SPRETEiJ_G0014992) #11	Carf (MGP_SPRETEiJ_G0014993) #12	Nbeal1 (MGP_SPRETEiJ_G0014994) #13	Cyp20a1 (MGP_SPRETEiJ_G0014995) #14	Abi2 (MGP_SPRETEiJ_G0014996) #15	Raph1 (MGP_SPRETEiJ_G0014997) #16	Cd28 (MGP_SPRETEiJ_G0014998) #17	Ctla4 (MGP_SPRETEiJ_G0014999) #18	Icos (MGP_SPRETEiJ_G0015000) #19	Pard3b (MGP_SPRETEiJ_G0015001) #20	Nrp2 (MGP_SPRETEiJ_G0015002) #22	Ino80d (MGP_SPRETEiJ_G0015003) #23	Ndufs1 (MGP_SPRETEiJ_G0015004) #24	Eef1b2 (MGP_SPRETEiJ_G0015005) #25	Cmklr2 (MGP_SPRETEiJ_G0015006) #26	Zdbf2 (MGP_SPRETEiJ_G0015007) #27	Adam23 (MGP_SPRETEiJ_G0015008) #28	Dytn (MGP_SPRETEiJ_G0015009) #30	Mdh1b (MGP_SPRETEiJ_G0015010) #32	Fastkd2 (MGP_SPRETEiJ_G0015011) #33	MGP_SPRETEiJ_G0015012	Klf7 (MGP_SPRETEiJ_G0015013) #35	Creb1 (MGP_SPRETEiJ_G0015014) #36	Mettl21a (MGP_SPRETEiJ_G0015015) #37	Ccnyl1 (MGP_SPRETEiJ_G0015016)	Fzd5 (MGP_SPRETEiJ_G0015017)
Steppe mouse	MODERN SPECIES	44	Fam117b (ENSMSIG00000010018) #9	Ica1l (ENSMSIG00000010027) #10	Wdr12 (ENSMSIG00000010103) #11	Carf (ENSMSIG00000010210) #12	ENSMSIG00000010287	Nbeal1 (ENSMSIG00000010304) #13	Cyp20a1 (ENSMSIG00000010618) #14	ENSMSIG00000010702 #15	Raph1 (ENSMSIG00000010756) #16	Cd28 (ENSMSIG00000011356) #17	ENSMSIG00000011370	Ctla4 (ENSMSIG00000011388) #18	Icos (ENSMSIG00000011424) #19	Pard3b (ENSMSIG00000011469) #20	ENSMSIG00000011764	Nrp2 (ENSMSIG00000011775) #22	Ino80d (ENSMSIG00000012604) #23	Ndufs1 (ENSMSIG00000012674) #24	Eef1b2 (ENSMSIG00000012804) #25	Cmklr2 (ENSMSIG00000012880) #26	Zdbf2 (ENSMSIG00000012889) #27	ENSMSIG00000012937	Adam23 (ENSMSIG00000012957) #28	ENSMSIG00000013264	Gm39653 (ENSMSIG00000013270) #29	Dytn (ENSMSIG00000013289) #30
Mouse	MODERN SPECIES		Sumo1 (ENSMUSG00000026021)	Nop58 (ENSMUSG00000026020)	Bmpr2 (ENSMUSG00000067336)	Fam117b (ENSMUSG00000041040) #9	Ica1l (ENSMUSG00000026018) #10	Wdr12 (ENSMUSG00000026019) #11	Carf (ENSMUSG00000026017) #12	Nbeal1 (ENSMUSG00000073664) #13	Cyp20a1 (ENSMUSG00000049439) #14	Abi2 (ENSMUSG00000026782) #15	Raph1 (ENSMUSG00000026014) #16	Cd28 (ENSMUSG00000026012) #17	Ctla4 (ENSMUSG00000026011) #18	Icos (ENSMUSG00000026009) #19	Pard3b (ENSMUSG00000052062) #20	Nrp2 (ENSMUSG00000025969) #22	Ino80d (ENSMUSG00000040865) #23	Ndufs1 (ENSMUSG00000025968) #24	Eef1b2 (ENSMUSG00000025967) #25	Cmklr2 (ENSMUSG00000046856) #26	Zdbf2 (ENSMUSG00000027520) #27	Adam23 (ENSMUSG00000025964) #28	Gm39653 (ENSMUSG00000115378) #29	Dytn (ENSMUSG00000069085) #30	Mdh1b (ENSMUSG00000025963) #32	Fastkd2 (ENSMUSG00000025962) #33	Klf7 (ENSMUSG00000025959) #35	Creb1 (ENSMUSG00000025958) #36	Mettl21a (ENSMUSG00000025956) #37	Ccnyl1 (ENSMUSG00000070871)	Fzd5 (ENSMUSG00000045005)
Ryukyu mouse	MODERN SPECIES		Sumo1 (MGP_CAROLIEiJ_G0014180)	Nop58 (MGP_CAROLIEiJ_G0014181)	Bmpr2 (MGP_CAROLIEiJ_G0014182)	Fam117b (MGP_CAROLIEiJ_G0014183) #9	MGP_CAROLIEiJ_G0014184 #10	MGP_CAROLIEiJ_G0014185	Carf (MGP_CAROLIEiJ_G0014186) #12	Nbeal1 (MGP_CAROLIEiJ_G0014187) #13	Cyp20a1 (MGP_CAROLIEiJ_G0014188) #14	Abi2 (MGP_CAROLIEiJ_G0014189) #15	Raph1 (MGP_CAROLIEiJ_G0014190) #16	Cd28 (MGP_CAROLIEiJ_G0014191) #17	Ctla4 (MGP_CAROLIEiJ_G0014192) #18	Icos (MGP_CAROLIEiJ_G0014193) #19	Pard3b (MGP_CAROLIEiJ_G0014194) #20	Nrp2 (MGP_CAROLIEiJ_G0014195) #22	Ino80d (MGP_CAROLIEiJ_G0014196) #23	Ndufs1 (MGP_CAROLIEiJ_G0014197) #24	Eef1b2 (MGP_CAROLIEiJ_G0014198) #25	Cmklr2 (MGP_CAROLIEiJ_G0014199) #26	Zdbf2 (MGP_CAROLIEiJ_G0014200) #27	Adam23 (MGP_CAROLIEiJ_G0014201) #28	Dytn (MGP_CAROLIEiJ_G0014202) #30	Mdh1b (MGP_CAROLIEiJ_G0014203) #32	Fastkd2 (MGP_CAROLIEiJ_G0014204) #33	MGP_CAROLIEiJ_G0014205	Klf7 (MGP_CAROLIEiJ_G0014206) #35	Creb1 (MGP_CAROLIEiJ_G0014207) #36	Mettl21a (MGP_CAROLIEiJ_G0014208) #37	Ccnyl1 (MGP_CAROLIEiJ_G0014209)	Fzd5 (MGP_CAROLIEiJ_G0014210)
Shrew mouse	MODERN SPECIES	18	MGP_PahariEiJ_G0027418	Nop58 (MGP_PahariEiJ_G0027419)	Bmpr2 (MGP_PahariEiJ_G0027420)	Fam117b (MGP_PahariEiJ_G0027421) #9	MGP_PahariEiJ_G0027422 #10	MGP_PahariEiJ_G0027423 #11	Carf (MGP_PahariEiJ_G0027424) #12	MGP_PahariEiJ_G0027425 #13	Cyp20a1 (MGP_PahariEiJ_G0027426) #14	Abi2 (MGP_PahariEiJ_G0027427) #15	Raph1 (MGP_PahariEiJ_G0027428) #16	Cd28 (MGP_PahariEiJ_G0027429) #17	Ctla4 (MGP_PahariEiJ_G0027430) #18	MGP_PahariEiJ_G0027431 #19	Pard3b (MGP_PahariEiJ_G0027432) #20	Nrp2 (MGP_PahariEiJ_G0027433) #22	Ino80d (MGP_PahariEiJ_G0027434) #23	MGP_PahariEiJ_G0027435 #24	Eef1b2 (MGP_PahariEiJ_G0027436) #25	Cmklr2 (MGP_PahariEiJ_G0027437) #26	Zdbf2 (MGP_PahariEiJ_G0027438) #27	Adam23 (MGP_PahariEiJ_G0027439) #28	Dytn (MGP_PahariEiJ_G0027440) #30	Mdh1b (MGP_PahariEiJ_G0027441) #32	Fastkd2 (MGP_PahariEiJ_G0027442) #33	MGP_PahariEiJ_G0027443	Klf7 (MGP_PahariEiJ_G0027444) #35	Creb1 (MGP_PahariEiJ_G0027445) #36	Mettl21a (MGP_PahariEiJ_G0027446) #37	Ccnyl1 (MGP_PahariEiJ_G0027447)	Fzd5 (MGP_PahariEiJ_G0027448)
Rat	MODERN SPECIES	19	Bmpr2 (ENSRNOG00000022196)	ENSRNOG00000066953	LOC301444 (ENSRNOG00000019107)	Fam117b (ENSRNOG00000022066) #9	Ica1l (ENSRNOG00000017258) #10	Wdr12 (ENSRNOG00000017340) #11	Carf (ENSRNOG00000017491) #12	Nbeal1 (ENSRNOG00000021525) #13	Cyp20a1 (ENSRNOG00000017631) #14	Abi2 (ENSRNOG00000017707) #15	Raph1 (ENSRNOG00000014722) #16	Cd28 (ENSRNOG00000010283) #17	Ctla4 (ENSRNOG00000054129) #18	Icos (ENSRNOG00000046196) #19	Pard3b (ENSRNOG00000024345) #20	Nrp2 (ENSRNOG00000031232) #22	Rpl37-ps5 (ENSRNOG00000033803)	Ino80d (ENSRNOG00000024272) #23	Ndufs1 (ENSRNOG00000011849) #24	Eef1b2 (ENSRNOG00000024186) #25	Cmklr2 (ENSRNOG00000045532) #26	Zdbf2 (ENSRNOG00000024114) #27	Adam23 (ENSRNOG00000012424) #28	Fam237a (ENSRNOG00000054699) #29	Dytn (ENSRNOG00000042181) #30	Mdh1b (ENSRNOG00000012891) #32	ENSRNOG00000063009	Fastkd2 (ENSRNOG00000023923) #33	ENSRNOG00000063607	Klf7 (ENSRNOG00000046242) #35	LOC103690545 (ENSRNOG00000064370)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1322							Nbeal1 (ENSNGAG00000020072) #13	Cyp20a1 (ENSNGAG00000020232) #14	Abi2 (ENSNGAG00000012110) #15	ENSNGAG00000001490 #16	Cd28 (ENSNGAG00000015761) #17	Ctla4 (ENSNGAG00000019017) #18	ENSNGAG00000010975	Icos (ENSNGAG00000015325) #19	Pard3b (ENSNGAG00000019309) #20	Nrp2 (ENSNGAG00000014175) #22	Ino80d (ENSNGAG00000007370) #23	Ndufs1 (ENSNGAG00000016531) #24	Eef1b2 (ENSNGAG00000020801) #25	Cmklr2 (ENSNGAG00000014936) #26	Zdbf2 (ENSNGAG00000010826) #27	Adam23 (ENSNGAG00000014933) #28	Mdh1b (ENSNGAG00000000139) #32	Fastkd2 (ENSNGAG00000001279) #33	Klf7 (ENSNGAG00000016561) #35	Creb1 (ENSNGAG00000018967) #36	Mettl21a (ENSNGAG00000013752) #37	ENSNGAG00000014167	Ccnyl1 (ENSNGAG00000004870)	Fzd5 (ENSNGAG00000014954)	Plekhm3 (ENSNGAG00000007962)
Lesser Egyptian jerboa	MODERN SPECIES	52	ENSJJAG00000022745	Nop58 (ENSJJAG00000018213)	Bmpr2 (ENSJJAG00000015151)	Fam117b (ENSJJAG00000019496) #9	Ica1l (ENSJJAG00000022732) #10	ENSJJAG00000000724 #11	Carf (ENSJJAG00000014072) #12	Nbeal1 (ENSJJAG00000023210) #13	Cyp20a1 (ENSJJAG00000007155) #14	Abi2 (ENSJJAG00000006918) #15	ENSJJAG00000023840 #16	Cd28 (ENSJJAG00000001227) #17	Ctla4 (ENSJJAG00000013112) #18	Icos (ENSJJAG00000007794) #19	Pard3b (ENSJJAG00000015271) #20	Nrp2 (ENSJJAG00000016788) #22	Ino80d (ENSJJAG00000018074) #23	Ndufs1 (ENSJJAG00000013916) #24	Eef1b2 (ENSJJAG00000004915) #25	Adam23 (ENSJJAG00000016078) #28	Dytn (ENSJJAG00000016868) #30	Mdh1b (ENSJJAG00000010713) #32	Fastkd2 (ENSJJAG00000000986) #33	ENSJJAG00000021742 #34	Klf7 (ENSJJAG00000011480) #35	Creb1 (ENSJJAG00000013846) #36	ENSJJAG00000023618 #37	Ccnyl1 (ENSJJAG00000024111)	Fzd5 (ENSJJAG00000004014)	Plekhm3 (ENSJJAG00000012116)	ENSJJAG00000021625
Kangaroo rat	MODERN SPECIES	320	Bmpr2 (ENSDORG00000009209)	ENSDORG00000015288 #9	Ica1l (ENSDORG00000015292) #10	Wdr12 (ENSDORG00000015294) #11	Carf (ENSDORG00000006614) #12	Nbeal1 (ENSDORG00000015714) #13	Cyp20a1 (ENSDORG00000015715) #14	ENSDORG00000028647	Abi2 (ENSDORG00000028252) #15	ENSDORG00000007525 #16	Cd28 (ENSDORG00000013428) #17	Ctla4 (ENSDORG00000008556) #18	Icos (ENSDORG00000010237) #19	ENSDORG00000029364	Pard3b (ENSDORG00000014139) #20	ENSDORG00000029450 #22	Ino80d (ENSDORG00000027999) #23	ENSDORG00000025350 #24	ENSDORG00000023550 #24	Cmklr2 (ENSDORG00000013107) #26	Adam23 (ENSDORG00000015422) #28	Dytn (ENSDORG00000028814) #30	Mdh1b (ENSDORG00000011290) #32	Fastkd2 (ENSDORG00000011295) #33	Klf7 (ENSDORG00000009634) #35	Creb1 (ENSDORG00000012535) #36	Mettl21a (ENSDORG00000012543) #37	Ccnyl1 (ENSDORG00000009933)	Fzd5 (ENSDORG00000027490)	ENSDORG00000023690	Plekhm3 (ENSDORG00000029697)
Lagomorpha	ANCESTRAL SPECIES	13	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041.ob #13	ENSGT00940000155041.nb #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a	ENSGT00940000162639
Rabbit	MODERN SPECIES	18	ENSOCUG00000006347 #9	ENSOCUG00000030693 #9	ENSOCUG00000010497 #10	WDR12 (ENSOCUG00000002961) #11	CARF (ENSOCUG00000005335) #12	ENSOCUG00000027134	NBEAL1 (ENSOCUG00000008716) #13	CYP20A1 (ENSOCUG00000008054) #14	ENSOCUG00000008062 #15	ENSOCUG00000016722 #16	CD28 (ENSOCUG00000016134) #17	ENSOCUG00000030918	CTLA4 (ENSOCUG00000017274) #18	ICOS (ENSOCUG00000001858) #19	PARD3B (ENSOCUG00000007959) #20	NRP2 (ENSOCUG00000007978) #22	INO80D (ENSOCUG00000014786) #23	ENSOCUG00000009848 #25	NDUFS1 (ENSOCUG00000012368) #24	CMKLR2 (ENSOCUG00000012384) #26	ENSOCUG00000024602	ENSOCUG00000009421 #27	ADAM23 (ENSOCUG00000010659) #28	DYTN (ENSOCUG00000021490) #30	MDH1B (ENSOCUG00000010506) #32	ENSOCUG00000010515 #33	CPO (ENSOCUG00000009806) #34	KLF7 (ENSOCUG00000009813) #35	ENSOCUG00000027419	CREB1 (ENSOCUG00000005427) #36	ENSOCUG00000005431 #37
Pika	MODERN SPECIES	3694														PARD3B (ENSOPRG00000010812) #20	ENSOPRG00000010848	NRP2 (ENSOPRG00000010856) #22
Tree shrew	MODERN SPECIES	653														PARD3B (ENSTBEG00000002494) #20	ENSTBEG00000004230	NRP2 (ENSTBEG00000004603) #22
Primates	ANCESTRAL SPECIES	13	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.b
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.b
Tarsier	MODERN SPECIES	4878																NRP2 (ENSTSYG00000033080) #22	INO80D (ENSTSYG00000030622) #23	NDUFS1 (ENSTSYG00000014545) #24	EEF1B2 (ENSTSYG00000014573) #25	ZDBF2 (ENSTSYG00000035582) #27
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00940000153534.A	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.b
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.a	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.a.b ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36
Hominidae	ANCESTRAL SPECIES	17	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.a.b ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00950000183046.a.a #9	ENSGT00610000087446	ENSGT00390000015889.j	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.a.b.a.a ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00950000183046.a.a #9	ENSGT00610000087446	ENSGT00390000015889.j	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.a.b.a.a ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36
Pan	ANCESTRAL SPECIES	12	ENSGT00950000183046.a.a #9	ENSGT00610000087446	ENSGT00390000015889.j	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.a.b.a.a ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36
Chimpanzee	MODERN SPECIES	15	ENSPTRG00000040928	ENSPTRG00000044806	ICA1L (ENSPTRG00000012822) #10	WDR12 (ENSPTRG00000012823) #11	CARF (ENSPTRG00000012824) #12	NBEAL1 (ENSPTRG00000012828) #13	ENSPTRG00000012829 #14	ABI2 (ENSPTRG00000012830) #15	RAPH1 (ENSPTRG00000012831) #16	ENSPTRG00000043246	CD28 (ENSPTRG00000012833) #17	ENSPTRG00000051964	CTLA4 (ENSPTRG00000044793) #18	ICOS (ENSPTRG00000012837) #19	PARD3B (ENSPTRG00000012838) #20	NRP2 (ENSPTRG00000012839) #22	INO80D (ENSPTRG00000012841) #23	NDUFS1 (ENSPTRG00000012842) #24	EEF1B2 (ENSPTRG00000049619) ##25	CMKLR2 (ENSPTRG00000012844) #26	ENSPTRG00000052002	ZDBF2 (ENSPTRG00000029052) #27	ADAM23 (ENSPTRG00000012846) #28	FAM237A (ENSPTRG00000045763) #29	DYTN (ENSPTRG00000042355) #30	MDH1B (ENSPTRG00000012847) #32	FASTKD2 (ENSPTRG00000012848) #33	CPO (ENSPTRG00000012849) #34	KLF7 (ENSPTRG00000012850) #35	CREB1 (ENSPTRG00000043959) #36	METTL21A (ENSPTRG00000012852) #37
Bonobo	MODERN SPECIES	15	BMPR2 (ENSPPAG00000017269)	FAM117B (ENSPPAG00000041596) #9	ENSPPAG00000027947	ICA1L (ENSPPAG00000037623) #10	ENSPPAG00000033697 #11	CARF (ENSPPAG00000042960) #12	NBEAL1 (ENSPPAG00000040934) #13	CYP20A1 (ENSPPAG00000040724) #14	ABI2 (ENSPPAG00000030582) #15	RAPH1 (ENSPPAG00000024317) #16	ENSPPAG00000032675	CD28 (ENSPPAG00000034998) #17	CTLA4 (ENSPPAG00000041661) #18	ICOS (ENSPPAG00000037117) #19	PARD3B (ENSPPAG00000033958) #20	NRP2 (ENSPPAG00000041062) #22	ENSPPAG00000040957	INO80D (ENSPPAG00000017120) #23	NDUFS1 (ENSPPAG00000032284) #24	ENSPPAG00000033754 ##25	ENSPPAG00000031391	ZDBF2 (ENSPPAG00000038901) #27	ADAM23 (ENSPPAG00000030147) #28	FAM237A (ENSPPAG00000028915) #29	DYTN (ENSPPAG00000008787) #30	ENSPPAG00000031338 #32	FASTKD2 (ENSPPAG00000021300) #33	CPO (ENSPPAG00000033230) #34	KLF7 (ENSPPAG00000035305) #35	CREB1 (ENSPPAG00000042817) #36	METTL21A (ENSPPAG00000041715) #37
Human	MODERN SPECIES	11	NOP58 (ENSG00000055044)	BMPR2 (ENSG00000204217)	ENSG00000289490	FAM117B (ENSG00000138439) #9	ICA1L (ENSG00000163596) #10	WDR12 (ENSG00000138442) #11	CARF (ENSG00000138380) #12	NBEAL1 (ENSG00000144426) #13	CYP20A1 (ENSG00000119004) #14	ABI2 (ENSG00000138443) #15	RAPH1 (ENSG00000173166) #16	CD28 (ENSG00000178562) #17	CTLA4 (ENSG00000163599) #18	ICOS (ENSG00000163600) #19	PARD3B (ENSG00000116117) #20	NRP2 (ENSG00000118257) #22	INO80D (ENSG00000114933) #23	NDUFS1 (ENSG00000023228) #24	EEF1B2 (ENSG00000114942) ##25	CMKLR2 (ENSG00000183671) #26	ZDBF2 (ENSG00000204186) #27	ADAM23 (ENSG00000114948) #28	FAM237A (ENSG00000235118) #29	DYTN (ENSG00000232125) #30	MDH1B (ENSG00000138400) #32	FASTKD2 (ENSG00000118246) #33	CPO (ENSG00000144410) #34	KLF7 (ENSG00000118263) #35	CREB1 (ENSG00000118260) #36	METTL21A (ENSG00000144401) #37	CCNYL1 (ENSG00000163249)
Gorilla	MODERN SPECIES	15	ENSGGOG00000014813 #9	ENSGGOG00000016194	ICA1L (ENSGGOG00000017038) #10	WDR12 (ENSGGOG00000026073) #11	ENSGGOG00000036442 #12	NBEAL1 (ENSGGOG00000015453) #13	CYP20A1 (ENSGGOG00000007044) #14	ABI2 (ENSGGOG00000016384) #15	RAPH1 (ENSGGOG00000016399) #16	ENSGGOG00000023735	CD28 (ENSGGOG00000041735) #17	ENSGGOG00000039900	CTLA4 (ENSGGOG00000007961) #18	ICOS (ENSGGOG00000014097) #19	PARD3B (ENSGGOG00000034911) #20	NRP2 (ENSGGOG00000009537) #22	INO80D (ENSGGOG00000015570) #23	NDUFS1 (ENSGGOG00000001513) #24	EEF1B2 (ENSGGOG00000007002) ##25	ENSGGOG00000042195	ZDBF2 (ENSGGOG00000023142) #27	ENSGGOG00000024971	ADAM23 (ENSGGOG00000012509) #28	FAM237A (ENSGGOG00000037017) #29	DYTN (ENSGGOG00000027242) #30	MDH1B (ENSGGOG00000002059) #32	FASTKD2 (ENSGGOG00000002062) #33	CPO (ENSGGOG00000016053) #34	KLF7 (ENSGGOG00000009338) #35	CREB1 (ENSGGOG00000024394) #36	METTL21A (ENSGGOG00000015815) #37
Orangutan	MODERN SPECIES	15	NOP58 (ENSPPYG00000013084)	BMPR2 (ENSPPYG00000013085)	FAM117B (ENSPPYG00000037197) #9	ENSPPYG00000034941	ICA1L (ENSPPYG00000013088) #10	WDR12 (ENSPPYG00000040830) #11	CARF (ENSPPYG00000013090) #12	NBEAL1 (ENSPPYG00000013092) #13	CYP20A1 (ENSPPYG00000013093) #14	ABI2 (ENSPPYG00000013094) #15	RAPH1 (ENSPPYG00000013096) #16	CD28 (ENSPPYG00000039922) #17	CTLA4 (ENSPPYG00000036623) #18	ICOS (ENSPPYG00000013100) #19	PARD3B (ENSPPYG00000013101) #20	NRP2 (ENSPPYG00000013102) #22	INO80D (ENSPPYG00000013104) #23	ENSPPYG00000038957	NDUFS1 (ENSPPYG00000013106) #24	EEF1B2 (ENSPPYG00000013107) ##25	CMKLR2 (ENSPPYG00000013108) #26	ZDBF2 (ENSPPYG00000013109) #27	ADAM23 (ENSPPYG00000013110) #28	FAM237A (ENSPPYG00000036282) #29	DYTN (ENSPPYG00000031262) #30	MDH1B (ENSPPYG00000013111) #32	FASTKD2 (ENSPPYG00000013112) #33	CPO (ENSPPYG00000013113) #34	KLF7 (ENSPPYG00000013114) #35	CREB1 (ENSPPYG00000013115) #36	METTL21A (ENSPPYG00000013116) #37
Gibbon	MODERN SPECIES	14	WDR12 (ENSNLEG00000007018) #11	CARF (ENSNLEG00000007026) #12	NBEAL1 (ENSNLEG00000007032) #13	ENSNLEG00000029450	CYP20A1 (ENSNLEG00000035097) #14	ENSNLEG00000007043 #15	RAPH1 (ENSNLEG00000007048) #16	ENSNLEG00000030127	ENSNLEG00000035533	ENSNLEG00000029125	CD28 (ENSNLEG00000007057) #17	CTLA4 (ENSNLEG00000007059) #18	ICOS (ENSNLEG00000007065) #19	ENSNLEG00000007066 #20	ENSNLEG00000036209 #20	NRP2 (ENSNLEG00000007071) #22	INO80D (ENSNLEG00000032256) #23	NDUFS1 (ENSNLEG00000007090) #24	ENSNLEG00000007098 ##25	ENSNLEG00000033131	ZDBF2 (ENSNLEG00000007100) #27	ADAM23 (ENSNLEG00000007102) #28	FAM237A (ENSNLEG00000007112) #29	DYTN (ENSNLEG00000007113) #30	MDH1B (ENSNLEG00000007114) #32	FASTKD2 (ENSNLEG00000007116) #33	CPO (ENSNLEG00000007121) #34	KLF7 (ENSNLEG00000035258) #35	CREB1 (ENSNLEG00000007124) #36	METTL21A (ENSNLEG00000007129) #37	CCNYL1 (ENSNLEG00000007131)
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00950000182810.A.a.a.lb.d	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36
Macaca	ANCESTRAL SPECIES	15	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552.b #16	ENSGT00530000063873.A #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a.b	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00950000182810.A.a.a.lb.d	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36
Pig-tailed macaque	MODERN SPECIES	409	FAM117B (ENSMNEG00000033073) #9	ICA1L (ENSMNEG00000039428) #10	ENSMNEG00000027411 #11	CARF (ENSMNEG00000033105) #12	NBEAL1 (ENSMNEG00000044041) #13	CYP20A1 (ENSMNEG00000045164) #14	ABI2 (ENSMNEG00000028519) #15	RAPH1 (ENSMNEG00000030823) #16	ENSMNEG00000036304	CD28 (ENSMNEG00000033642) #17	ENSMNEG00000030427	CTLA4 (ENSMNEG00000043834) #18	ICOS (ENSMNEG00000029598) #19	PARD3B (ENSMNEG00000040103) #20	ENSMNEG00000031020	NRP2 (ENSMNEG00000039082) #22	INO80D (ENSMNEG00000032459) #23	NDUFS1 (ENSMNEG00000032822) #24	ENSMNEG00000030060 ##25	ZDBF2 (ENSMNEG00000031863) #27	ENSMNEG00000028225	ADAM23 (ENSMNEG00000027959) #28	FAM237A (ENSMNEG00000032870) #29	DYTN (ENSMNEG00000038040) #30	MDH1B (ENSMNEG00000043559) #32	FASTKD2 (ENSMNEG00000043091) #33	CPO (ENSMNEG00000008835) #34	KLF7 (ENSMNEG00000027996) #35	CREB1 (ENSMNEG00000030274) #36	METTL21A (ENSMNEG00000034465) #37	CCNYL1 (ENSMNEG00000035559)
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00940000154319.u.b.a.b	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552.b #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.b.a
Rhesus	MODERN SPECIES	3	FAM117B (ENSMMUG00000021152) #9	ICA1L (ENSMMUG00000017364) #10	ENSMMUG00000059397	WDR12 (ENSMMUG00000043068) #11	CARF (ENSMMUG00000006418) #12	NBEAL1 (ENSMMUG00000006420) #13	CYP20A1 (ENSMMUG00000005971) #14	ABI2 (ENSMMUG00000000312) #15	RAPH1 (ENSMMUG00000000314) #16	CD28 (ENSMMUG00000057214) #17	CTLA4 (ENSMMUG00000015903) #18	ICOS (ENSMMUG00000002648) #19	ENSMMUG00000052080	PARD3B (ENSMMUG00000014814) #20	ENSMMUG00000055410	NRP2 (ENSMMUG00000020052) #22	INO80D (ENSMMUG00000001053) #23	ENSMMUG00000054550	NDUFS1 (ENSMMUG00000016788) #24	EEF1B2 (ENSMMUG00000001054) ##25	CMKLR2 (ENSMMUG00000008334) #26	ZDBF2 (ENSMMUG00000031276) #27	ADAM23 (ENSMMUG00000011641) #28	FAM237A (ENSMMUG00000052987) #29	DYTN (ENSMMUG00000048288) #30	MDH1B (ENSMMUG00000017734) #32	FASTKD2 (ENSMMUG00000017735) #33	CPO (ENSMMUG00000063052) #34	ENSMMUG00000051957 #35	KLF7 (ENSMMUG00000000190) #35	CREB1 (ENSMMUG00000022601) #36
Crab-eating macaque	MODERN SPECIES	3	ENSMFAG00000055750	ENSMFAG00000048371	ENSMFAG00000044326 #11	CARF (ENSMFAG00000042636) #12	NBEAL1 (ENSMFAG00000032529) #13	ENSMFAG00000065796	CYP20A1 (ENSMFAG00000036924) #14	ENSMFAG00000048556	ABI2 (ENSMFAG00000031286) #15	ENSMFAG00000003148 #16	ENSMFAG00000062324 #16	CD28 (ENSMFAG00000003864) #17	CTLA4 (ENSMFAG00000004047) #18	ICOS (ENSMFAG00000053159) #19	PARD3B (ENSMFAG00000043904) #20	NRP2 (ENSMFAG00000038385) #22	ENSMFAG00000053377	INO80D (ENSMFAG00000001629) #23	NDUFS1 (ENSMFAG00000039201) #24	ENSMFAG00000038364 ##25	CMKLR2 (ENSMFAG00000013528) #26	ZDBF2 (ENSMFAG00000044616) #27	ADAM23 (ENSMFAG00000030094) #28	FAM237A (ENSMFAG00000031105) #29	DYTN (ENSMFAG00000044098) #30	MDH1B (ENSMFAG00000035811) #32	ENSMFAG00000049460	FASTKD2 (ENSMFAG00000033471) #33	CPO (ENSMFAG00000062349) #34	KLF7 (ENSMFAG00000039083) #35	ENSMFAG00000041805 #37
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT00940000154319.u.b.a.b	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00950000182810.A.a.a.lb.d	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36
Olive baboon	MODERN SPECIES	1	BMPR2 (ENSPANG00000006512)	ENSPANG00000042529	FAM117B (ENSPANG00000009087) #9	ICA1L (ENSPANG00000017467) #10	ENSPANG00000008983 #11	ENSPANG00000008982 #12	NBEAL1 (ENSPANG00000000692) #13	CYP20A1 (ENSPANG00000002439) #14	ABI2 (ENSPANG00000023238) #15	RAPH1 (ENSPANG00000018186) #16	CD28 (ENSPANG00000011488) #17	CTLA4 (ENSPANG00000007100) #18	ICOS (ENSPANG00000010251) #19	ENSPANG00000042490	PARD3B (ENSPANG00000017315) #20	NRP2 (ENSPANG00000011487) #22	INO80D (ENSPANG00000005753) #23	NDUFS1 (ENSPANG00000019101) #24	ENSPANG00000011248 ##25	CMKLR2 (ENSPANG00000007301) #26	ZDBF2 (ENSPANG00000023236) #27	ENSPANG00000032033	ADAM23 (ENSPANG00000025872) #28	FAM237A (ENSPANG00000032174) #29	DYTN (ENSPANG00000011028) #30	MDH1B (ENSPANG00000022792) #32	ENSPANG00000043039	FASTKD2 (ENSPANG00000012835) #33	CPO (ENSPANG00000005004) #34	KLF7 (ENSPANG00000005240) #35	CREB1 (ENSPANG00000009083) #36
Cercopithecinae_d	ANCESTRAL SPECIES		ENSGT00940000154319.u.b.a.b	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00950000182810.A.a.a.lb.d	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36
Sooty mangabey	MODERN SPECIES	570	BMPR2 (ENSCATG00000033192)	ENSCATG00000033526	FAM117B (ENSCATG00000033570) #9	ICA1L (ENSCATG00000036911) #10	ENSCATG00000035496 #11	CARF (ENSCATG00000035061) #12	NBEAL1 (ENSCATG00000036478) #13	CYP20A1 (ENSCATG00000034415) #14	ABI2 (ENSCATG00000038300) #15	RAPH1 (ENSCATG00000044686) #16	ENSCATG00000043923	CD28 (ENSCATG00000043017) #17	CTLA4 (ENSCATG00000036235) #18	ICOS (ENSCATG00000043591) #19	PARD3B (ENSCATG00000022284) #20	NRP2 (ENSCATG00000032051) #22	INO80D (ENSCATG00000044654) #23	NDUFS1 (ENSCATG00000037259) #24	ENSCATG00000037736 ##25	ZDBF2 (ENSCATG00000037091) #27	ENSCATG00000037624	ADAM23 (ENSCATG00000043626) #28	FAM237A (ENSCATG00000036777) #29	DYTN (ENSCATG00000035275) #30	MDH1B (ENSCATG00000035467) #32	FASTKD2 (ENSCATG00000038647) #33	CPO (ENSCATG00000043384) #34	KLF7 (ENSCATG00000041615) #35	CREB1 (ENSCATG00000037133) #36	METTL21A (ENSCATG00000041598) #37	CCNYL1 (ENSCATG00000037115)
Drill	MODERN SPECIES	1089						NBEAL1 (ENSMLEG00000032708) #13	CYP20A1 (ENSMLEG00000034377) #14	ABI2 (ENSMLEG00000040577) #15	RAPH1 (ENSMLEG00000033969) #16	ENSMLEG00000004995	CD28 (ENSMLEG00000037603) #17	CTLA4 (ENSMLEG00000037639) #18	ICOS (ENSMLEG00000007807) #19	PARD3B (ENSMLEG00000031270) #20	ENSMLEG00000040986	NRP2 (ENSMLEG00000035732) #22	INO80D (ENSMLEG00000039669) #23
Vervet Monkey	MODERN SPECIES	1	NOP58 (ENSCSAG00000010496)	BMPR2 (ENSCSAG00000010485)	FAM117B (ENSCSAG00000010474) #9	ICA1L (ENSCSAG00000010466) #10	ENSCSAG00000010442 #11	CARF (ENSCSAG00000010380) #12	NBEAL1 (ENSCSAG00000010364) #13	CYP20A1 (ENSCSAG00000010341) #14	ABI2 (ENSCSAG00000010327) #15	RAPH1 (ENSCSAG00000010318) #16	CD28 (ENSCSAG00000010308) #17	ENSCSAG00000010293	CTLA4 (ENSCSAG00000010288) #18	ICOS (ENSCSAG00000010281) #19	PARD3B (ENSCSAG00000010270) #20	NRP2 (ENSCSAG00000010258) #22	INO80D (ENSCSAG00000010251) #23	NDUFS1 (ENSCSAG00000010247) #24	ENSCSAG00000010238 #25	CMKLR2 (ENSCSAG00000018769) #26	ZDBF2 (ENSCSAG00000010233) #27	ENSCSAG00000010220	ADAM23 (ENSCSAG00000010198) #28	DYTN (ENSCSAG00000010181) #30	MDH1B (ENSCSAG00000010163) #32	FASTKD2 (ENSCSAG00000010158) #33	CPO (ENSCSAG00000010143) #34	KLF7 (ENSCSAG00000010117) #35	CREB1 (ENSCSAG00000010111) #36	METTL21A (ENSCSAG00000010107) #37	CCNYL1 (ENSCSAG00000010093)
Rhinopithecus	ANCESTRAL SPECIES	73	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b.c #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.b #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37
Black snub-nosed monkey	MODERN SPECIES	1164															PARD3B (ENSRBIG00000039853) #20	NRP2 (ENSRBIG00000035417) #22	INO80D (ENSRBIG00000044868) #23	NDUFS1 (ENSRBIG00000020611) #24	ENSRBIG00000040112 ##25	ENSRBIG00000031452	ZDBF2 (ENSRBIG00000033928) #27	ADAM23 (ENSRBIG00000032092) #28	FAM237A (ENSRBIG00000033114) #29	DYTN (ENSRBIG00000028505) #30	ENSRBIG00000025761 #32	FASTKD2 (ENSRBIG00000039778) #33	CPO (ENSRBIG00000037719) #34	KLF7 (ENSRBIG00000040855) #35
Golden snub-nosed monkey	MODERN SPECIES	2758				CARF (ENSRROG00000045180) #12	NBEAL1 (ENSRROG00000015491) #13	CYP20A1 (ENSRROG00000040044) #14	ABI2 (ENSRROG00000040959) #15	RAPH1 (ENSRROG00000010278) #16	ENSRROG00000006311	ENSRROG00000034411	CD28 (ENSRROG00000043826) #17	ENSRROG00000034095	CTLA4 (ENSRROG00000028565) #18	ICOS (ENSRROG00000038288) #19	PARD3B (ENSRROG00000013717) #20	NRP2 (ENSRROG00000040911) #22	INO80D (ENSRROG00000003571) #23	NDUFS1 (ENSRROG00000033953) #24	ENSRROG00000041925 ##25	CMKLR2 (ENSRROG00000015659) #26	ENSRROG00000038360	ZDBF2 (ENSRROG00000032109) #27	ADAM23 (ENSRROG00000036437) #28
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00940000156449	ENSGT00390000010308.cb.b	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00390000000685.o.b.a	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00390000001455.`b.a	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.b.b ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.a #35	ENSGT00940000155408 #36	ENSGT00940000157249.c #37
Cebidae	ANCESTRAL SPECIES	11	ENSGT00940000156449	ENSGT00390000010308.cb.b	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00390000000685.o.b.a	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00390000001455.`b.a	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.b.b.a ##25	ENSGT00940000160642 #26	ENSGT00950000183014.f.a.g.b.b.b.b ##25	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.a #35	ENSGT00940000155408 #36
Marmoset	MODERN SPECIES	18	BMPR2 (ENSCJAG00000005066)	FAM117B (ENSCJAG00000047724) #9	ICA1L (ENSCJAG00000005162) #10	WDR12 (ENSCJAG00000005171) #11	CARF (ENSCJAG00000005224) #12	NBEAL1 (ENSCJAG00000031696) #13	ENSCJAG00000081284	CYP20A1 (ENSCJAG00000039360) #14	ABI2 (ENSCJAG00000005399) #15	RAPH1 (ENSCJAG00000005339) #16	CD28 (ENSCJAG00000042321) #17	CTLA4 (ENSCJAG00000005495) #18	ICOS (ENSCJAG00000005516) #19	PARD3B (ENSCJAG00000005521) #20	ENSCJAG00000076910	NRP2 (ENSCJAG00000005577) #22	ENSCJAG00000045767	INO80D (ENSCJAG00000005682) #23	NDUFS1 (ENSCJAG00000005725) #24	ENSCJAG00000005805 ##25	CMKLR2 (ENSCJAG00000077852) #26	ENSCJAG00000079037	ENSCJAG00000085853	ZDBF2 (ENSCJAG00000005812) #27	ADAM23 (ENSCJAG00000005821) #28	DYTN (ENSCJAG00000005926) #30	MDH1B (ENSCJAG00000005953) #32	FASTKD2 (ENSCJAG00000005971) #33	ENSCJAG00000073541	CPO (ENSCJAG00000005991) #34	ENSCJAG00000006023 #35
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT00940000156449	ENSGT00390000010308.cb.b	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00390000000685.o.b.a	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00390000001455.`b.a	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.b.b.a ##25	ENSGT00950000183014.f.a.g.b.b.b.b ##25	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235.g.a #35	ENSGT00940000155408 #36	ENSGT00940000157249.c #37
Capuchin	MODERN SPECIES	101	ENSCCAG00000026090	FAM117B (ENSCCAG00000031732) #9	ICA1L (ENSCCAG00000027883) #10	WDR12 (ENSCCAG00000005461) #11	CARF (ENSCCAG00000019881) #12	NBEAL1 (ENSCCAG00000021158) #13	ENSCCAG00000031449	CYP20A1 (ENSCCAG00000036341) #14	ABI2 (ENSCCAG00000027705) #15	RAPH1 (ENSCCAG00000029188) #16	ENSCCAG00000031812	CD28 (ENSCCAG00000035864) #17	CTLA4 (ENSCCAG00000029978) #18	ICOS (ENSCCAG00000019210) #19	PARD3B (ENSCCAG00000034949) #20	NRP2 (ENSCCAG00000026361) #22	ENSCCAG00000029458	LSM5 (ENSCCAG00000032792)	INO80D (ENSCCAG00000028441) #23	NDUFS1 (ENSCCAG00000021875) #24	ENSCCAG00000033644 ##25	ENSCCAG00000029547	ZDBF2 (ENSCCAG00000026606) #27	ADAM23 (ENSCCAG00000031476) #28	FAM237A (ENSCCAG00000025434) #29	DYTN (ENSCCAG00000036386) #30
Bolivian squirrel monkey	MODERN SPECIES	56	ENSSBOG00000016073 #9	ICA1L (ENSSBOG00000032973) #10	WDR12 (ENSSBOG00000015132) #11	CARF (ENSSBOG00000032523) #12	NBEAL1 (ENSSBOG00000032563) #13	ENSSBOG00000030482	CYP20A1 (ENSSBOG00000025384) #14	ABI2 (ENSSBOG00000031443) #15	RAPH1 (ENSSBOG00000036069) #16	ENSSBOG00000030839	CD28 (ENSSBOG00000032327) #17	ENSSBOG00000030167	CTLA4 (ENSSBOG00000034817) #18	ICOS (ENSSBOG00000000744) #19	PARD3B (ENSSBOG00000029267) #20	NRP2 (ENSSBOG00000035290) #22	ENSSBOG00000034794	INO80D (ENSSBOG00000020878) #23	NDUFS1 (ENSSBOG00000028426) #24	ENSSBOG00000036258 ##25	ZDBF2 (ENSSBOG00000011111) #27	ADAM23 (ENSSBOG00000001918) #28	FAM237A (ENSSBOG00000033809) #29	DYTN (ENSSBOG00000026100) #30	MDH1B (ENSSBOG00000029880) #32	FASTKD2 (ENSSBOG00000029513) #33	CPO (ENSSBOG00000030310) #34	ENSSBOG00000027628 #35	ENSSBOG00000018885	CREB1 (ENSSBOG00000034085) #36	ENSSBOG00000033378 #37
Mas night monkey	MODERN SPECIES	357	FAM117B (ENSANAG00000032237) #9	ICA1L (ENSANAG00000036249) #10	WDR12 (ENSANAG00000030065) #11	CARF (ENSANAG00000032508) #12	NBEAL1 (ENSANAG00000029269) #13	ENSANAG00000023562	CYP20A1 (ENSANAG00000026608) #14	ABI2 (ENSANAG00000037183) #15	RAPH1 (ENSANAG00000037926) #16	CD28 (ENSANAG00000027528) #17	CTLA4 (ENSANAG00000027709) #18	ICOS (ENSANAG00000027294) #19	ENSANAG00000037162	ENSANAG00000037079	PARD3B (ENSANAG00000024698) #20	NRP2 (ENSANAG00000033490) #22	ENSANAG00000037758	INO80D (ENSANAG00000029568) #23	NDUFS1 (ENSANAG00000020079) #24	ENSANAG00000024356 ##25	ZDBF2 (ENSANAG00000020305) #27	ADAM23 (ENSANAG00000035087) #28	FAM237A (ENSANAG00000024386) #29	DYTN (ENSANAG00000031986) #30	MDH1B (ENSANAG00000008683) #32	FASTKD2 (ENSANAG00000034550) #33	CPO (ENSANAG00000023194) #34	KLF7 (ENSANAG00000036279) #35	CREB1 (ENSANAG00000025888) #36	ENSANAG00000020586 #37	CCNYL1 (ENSANAG00000020995)
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Lemuriformes_a	ANCESTRAL SPECIES	15	ENSGT00940000153534.A	ENSGT00390000001413.b	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Coquerels sifaka	MODERN SPECIES	847															PARD3B (ENSPCOG00000018611) #20	NRP2 (ENSPCOG00000020112) #22	INO80D (ENSPCOG00000024934) #23	ENSPCOG00000018961 #24	EEF1B2 (ENSPCOG00000016289) #25	ENSPCOG00000013632	ZDBF2 (ENSPCOG00000019226) #27	ADAM23 (ENSPCOG00000023473) #28	FAM237A (ENSPCOG00000018015) #29	DYTN (ENSPCOG00000020018) #30	MDH1B (ENSPCOG00000017083) #32	FASTKD2 (ENSPCOG00000028714) #33	CPO (ENSPCOG00000028646) #34	KLF7 (ENSPCOG00000018231) #35	CREB1 (ENSPCOG00000021255) #36	METTL21A (ENSPCOG00000018442) #37	ENSPCOG00000013286
Greater bamboo lemur	MODERN SPECIES	388											CD28 (ENSPSMG00000022341) #17	ENSPSMG00000022328	CTLA4 (ENSPSMG00000022319) #18	ICOS (ENSPSMG00000022309) #19	PARD3B (ENSPSMG00000022181) #20	NRP2 (ENSPSMG00000021719) #22	INO80D (ENSPSMG00000021497) #23	NDUFS1 (ENSPSMG00000021383) #24	EEF1B2 (ENSPSMG00000021215) #25	CMKLR2 (ENSPSMG00000021198) #26
Mouse lemur	MODERN SPECIES	30	FAM117B (ENSMICG00000042296) #9	SLC16A14 (ENSMICG00000010609)	FBXO36 (ENSMICG00000034045)	ICA1L (ENSMICG00000002701) #10	ENSMICG00000044580 #11	CARF (ENSMICG00000011943) #12	ENSMICG00000026752	NBEAL1 (ENSMICG00000003736) #13	CYP20A1 (ENSMICG00000010806) #14	ABI2 (ENSMICG00000048062) #15	RAPH1 (ENSMICG00000001085) #16	CD28 (ENSMICG00000044645) #17	CTLA4 (ENSMICG00000032206) #18	ICOS (ENSMICG00000037046) #19	PARD3B (ENSMICG00000009358) #20	NRP2 (ENSMICG00000009376) #22	ENSMICG00000044290	INO80D (ENSMICG00000010590) #23	NDUFS1 (ENSMICG00000010601) #24	EEF1B2 (ENSMICG00000047922) #25	ZDBF2 (ENSMICG00000044925) #27	ADAM23 (ENSMICG00000009477) #28	FAM237A (ENSMICG00000044768) #29	DYTN (ENSMICG00000027944) #30	MDH1B (ENSMICG00000009487) #32	FASTKD2 (ENSMICG00000026515) #33	CPO (ENSMICG00000015370) #34	KLF7 (ENSMICG00000037405) #35	CREB1 (ENSMICG00000009731) #36	METTL21A (ENSMICG00000009739) #37	ENSMICG00000009744
Bushbaby	MODERN SPECIES	128	ENSOGAG00000030345	NOP58 (ENSOGAG00000003906)	BMPR2 (ENSOGAG00000007765)	FAM117B (ENSOGAG00000001497) #9	ICA1L (ENSOGAG00000001500) #10	WDR12 (ENSOGAG00000006573) #11	CARF (ENSOGAG00000032187) #12	NBEAL1 (ENSOGAG00000015089) #13	CYP20A1 (ENSOGAG00000015164) #14	ENSOGAG00000033059	ABI2 (ENSOGAG00000011602) #15	RAPH1 (ENSOGAG00000015099) #16	CD28 (ENSOGAG00000012567) #17	CTLA4 (ENSOGAG00000002578) #18	PARD3B (ENSOGAG00000007396) #20	NRP2 (ENSOGAG00000007405) #22	INO80D (ENSOGAG00000005756) #23	NDUFS1 (ENSOGAG00000011226) #24	EEF1B2 (ENSOGAG00000011229) #25	CMKLR2 (ENSOGAG00000011232) #26	ENSOGAG00000031172	ZDBF2 (ENSOGAG00000016996) #27	ENSOGAG00000031644	ADAM23 (ENSOGAG00000016997) #28	DYTN (ENSOGAG00000027434) #30	MDH1B (ENSOGAG00000017006) #32	FASTKD2 (ENSOGAG00000017008) #33	CPO (ENSOGAG00000017012) #34	KLF7 (ENSOGAG00000017014) #35	CREB1 (ENSOGAG00000007121) #36	METTL21A (ENSOGAG00000007128) #37
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000176171	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Eulipotyphla	ANCESTRAL SPECIES	1829															ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22
Hedgehog	MODERN SPECIES	1961																NRP2 (ENSEEUG00000012888) #22
Common shrew	MODERN SPECIES	1244															PARD3B (ENSSARG00000010690) #20	NRP2 (ENSSARG00000010738) #22
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000176171	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000176171	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Suina	ANCESTRAL SPECIES	3	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Chacoan peccary	MODERN SPECIES	91	SUMO1 (ENSCWAG00000016775)	NOP58 (ENSCWAG00000016884)	BMPR2 (ENSCWAG00000016944)	FAM117B (ENSCWAG00000017046) #9	ICA1L (ENSCWAG00000017108) #10	WDR12 (ENSCWAG00000017209) #11	CARF (ENSCWAG00000017264) #12	NBEAL1 (ENSCWAG00000017563) #13	CYP20A1 (ENSCWAG00000017608) #14	ABI2 (ENSCWAG00000017671) #15	RAPH1 (ENSCWAG00000018090) #16	CD28 (ENSCWAG00000020352) #17	CTLA4 (ENSCWAG00000020380) #18	ICOS (ENSCWAG00000020408) #19	PARD3B (ENSCWAG00000020460) #20	NRP2 (ENSCWAG00000020581) #22	INO80D (ENSCWAG00000020612) #23	ENSCWAG00000020619	NDUFS1 (ENSCWAG00000020647) #24	EEF1B2 (ENSCWAG00000020782) #25	CMKLR2 (ENSCWAG00000020796) #26	ENSCWAG00000020804 #27	ENSCWAG00000020821
Pig	MODERN SPECIES	6	BMPR2 (ENSSSCG00000016113)	FAM117B (ENSSSCG00000016114) #9	ENSSSCG00000043400	ICA1L (ENSSSCG00000016115) #10	WDR12 (ENSSSCG00000016116) #11	CARF (ENSSSCG00000016117) #12	NBEAL1 (ENSSSCG00000016118) #13	CYP20A1 (ENSSSCG00000055761) #14	ABI2 (ENSSSCG00000034630) #15	ENSSSCG00000016119 #16	CD28 (ENSSSCG00000028561) #17	CTLA4 (ENSSSCG00000016122) #18	ICOS (ENSSSCG00000025042) #19	PARD3B (ENSSSCG00000016123) #20	ENSSSCG00000055400	NRP2 (ENSSSCG00000026383) #22	INO80D (ENSSSCG00000016125) #23	NDUFS1 (ENSSSCG00000016127) #24	EEF1B2 (ENSSSCG00000016128) #25	CMKLR2 (ENSSSCG00000016129) #26	ZDBF2 (ENSSSCG00000016130) #27	ADAM23 (ENSSSCG00000016131) #28	FAM237A (ENSSSCG00000036691) #29	DYTN (ENSSSCG00000035158) #30	MDH1B (ENSSSCG00000016133) #32	FASTKD2 (ENSSSCG00000016134) #33	CPO (ENSSSCG00000016135) #34	KLF7 (ENSSSCG00000029998) #35	ENSSSCG00000042730	CREB1 (ENSSSCG00000034395) #36	METTL21A (ENSSSCG00000036466) #37
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000176171	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000176171	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Cetacea	ANCESTRAL SPECIES	14	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00390000001958.n.a.g	ENSGT00940000154453.b.b
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00390000001958.n.a.g	ENSGT00390000004738.q.b
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00390000001958.n.a.g	ENSGT00940000154453.b.b
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00960000190610	ENSGT00440000037606.b #27	ENSGT00910000144184.r.a.a.a.a	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00950000183010.a.b.a.a.b	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00960000190610	ENSGT00440000037606.b #27	ENSGT00910000144184.r.a.a.a.a	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37
Narwhal	MODERN SPECIES	302	FAM117B (ENSMMNG00015007345) #9	ICA1L (ENSMMNG00015007312) #10	WDR12 (ENSMMNG00015007273) #11	CARF (ENSMMNG00015007132) #12	NBEAL1 (ENSMMNG00015007045) #13	CYP20A1 (ENSMMNG00015007001) #14	ABI2 (ENSMMNG00015006963) #15	RAPH1 (ENSMMNG00015006494) #16	ENSMMNG00015006290	CD28 (ENSMMNG00015006278) #17	CTLA4 (ENSMMNG00015006260) #18	ICOS (ENSMMNG00015006232) #19	ENSMMNG00015006206	ENSMMNG00015006192	PARD3B (ENSMMNG00015005987) #20	NRP2 (ENSMMNG00015005855) #22	INO80D (ENSMMNG00015005802) #23	NDUFS1 (ENSMMNG00015005695) #24	EEF1B2 (ENSMMNG00015005617) #25	CMKLR2 (ENSMMNG00015005602) #26	ENSMMNG00015005593	ZDBF2 (ENSMMNG00015005582) #27	ENSMMNG00015005570	ADAM23 (ENSMMNG00015005478) #28	FAM237A (ENSMMNG00015005439) #29	DYTN (ENSMMNG00015005422) #30	MDH1B (ENSMMNG00015005351) #32	FASTKD2 (ENSMMNG00015005336) #33	KLF7 (ENSMMNG00015005320) #35	CREB1 (ENSMMNG00015005293) #36	METTL21A (ENSMMNG00015005268) #37
Beluga whale	MODERN SPECIES	84	ICA1L (ENSDLEG00000018321) #10	WDR12 (ENSDLEG00000018347) #11	CARF (ENSDLEG00000018361) #12	NBEAL1 (ENSDLEG00000018755) #13	ENSDLEG00000020428 #15	ENSDLEG00000008100 #15	RAPH1 (ENSDLEG00000008223) #16	ENSDLEG00000008980	ENSDLEG00000009004 #17	CTLA4 (ENSDLEG00000009020) #18	ICOS (ENSDLEG00000009050) #19	ENSDLEG00000009073	ENSDLEG00000009090	ENSDLEG00000009108	PARD3B (ENSDLEG00000009127) #20	NRP2 (ENSDLEG00000009192) #22	INO80D (ENSDLEG00000009298) #23	NDUFS1 (ENSDLEG00000009340) #24	EEF1B2 (ENSDLEG00000009390) #25	GPR1 (ENSDLEG00000009434) #26	ENSDLEG00000009440	ZDBF2 (ENSDLEG00000009453) #27	ADAM23 (ENSDLEG00000009497) #28	FAM237A (ENSDLEG00000009620) #29	DYTN (ENSDLEG00000009655) #30	MDH1B (ENSDLEG00000009773) #32	FASTKD2 (ENSDLEG00000009822) #33	KLF7 (ENSDLEG00000009871) #35	CREB1 (ENSDLEG00000009895) #36	METTL21A (ENSDLEG00000009925) #37	ENSDLEG00000009942
Vaquita	MODERN SPECIES	18	SUMO1 (ENSPSNG00000012848)	NOP58 (ENSPSNG00000012735)	BMPR2 (ENSPSNG00000012669)	FAM117B (ENSPSNG00000012551) #9	ICA1L (ENSPSNG00000012492) #10	WDR12 (ENSPSNG00000012441) #11	CARF (ENSPSNG00000011886) #12	NBEAL1 (ENSPSNG00000011649) #13	CYP20A1 (ENSPSNG00000011532) #14	ABI2 (ENSPSNG00000011330) #15	RAPH1 (ENSPSNG00000009801) #16	ENSPSNG00000009309 #17	CTLA4 (ENSPSNG00000009249) #18	ICOS (ENSPSNG00000009099) #19	PARD3B (ENSPSNG00000008898) #20	NRP2 (ENSPSNG00000008707) #22	ENSPSNG00000008614	INO80D (ENSPSNG00000008590) #23	NDUFS1 (ENSPSNG00000008252) #24	EEF1B2 (ENSPSNG00000008153) #25	CMKLR2 (ENSPSNG00000008130) #26	ENSPSNG00000008115	ZDBF2 (ENSPSNG00000008096) #27	ENSPSNG00000008082	ADAM23 (ENSPSNG00000007702) #28	FAM237A (ENSPSNG00000022142) #29	DYTN (ENSPSNG00000022128) #30	MDH1B (ENSPSNG00000022108) #32	FASTKD2 (ENSPSNG00000022088) #33	KLF7 (ENSPSNG00000022054) #35	CREB1 (ENSPSNG00000022021) #36
Dolphin	MODERN SPECIES	6557																NRP2 (ENSTTRG00000014816) #22
Sperm whale	MODERN SPECIES	11	BMPR2 (ENSPCTG00005003518)	FAM117B (ENSPCTG00005003547) #9	ICA1L (ENSPCTG00005003564) #10	WDR12 (ENSPCTG00005003584) #11	CARF (ENSPCTG00005003645) #12	NBEAL1 (ENSPCTG00005003780) #13	CYP20A1 (ENSPCTG00005003802) #14	ABI2 (ENSPCTG00005003833) #15	RAPH1 (ENSPCTG00005003938) #16	ENSPCTG00005005119 #17	CTLA4 (ENSPCTG00005005168) #18	ICOS (ENSPCTG00005005246) #19	ENSPCTG00005005318	ENSPCTG00005005328	PARD3B (ENSPCTG00005005375) #20	NRP2 (ENSPCTG00005005530) #22	ENSPCTG00005006370	INO80D (ENSPCTG00005006389) #23	ENSPCTG00005006412	NDUFS1 (ENSPCTG00005006448) #24	EEF1B2 (ENSPCTG00005006746) #25	GPR1 (ENSPCTG00005006803) #26	ZDBF2 (ENSPCTG00005006840) #27	ADAM23 (ENSPCTG00005007031) #28	FAM237A (ENSPCTG00005007294) #29	DYTN (ENSPCTG00005007310) #30	MDH1B (ENSPCTG00005007378) #32	FASTKD2 (ENSPCTG00005004965) #33	KLF7 (ENSPCTG00005005002) #35	CREB1 (ENSPCTG00005005085) #36	METTL21A (ENSPCTG00005005122) #37
Blue whale	MODERN SPECIES	18	FAM117B (ENSBMSG00010006217) #9	ICA1L (ENSBMSG00010006262) #10	WDR12 (ENSBMSG00010006329) #11	CARF (ENSBMSG00010006417) #12	ENSBMSG00010006579 #13	ENSBMSG00010006612 #13	CYP20A1 (ENSBMSG00010006657) #14	ABI2 (ENSBMSG00010006723) #15	ENSBMSG00010000193 #17	ENSBMSG00010000215 #17	ENSBMSG00010000230	ENSBMSG00010000252	ICOS (ENSBMSG00010000278) #19	ENSBMSG00010000353	PARD3B (ENSBMSG00010000409) #20	NRP2 (ENSBMSG00010000535) #22	ENSBMSG00010001002	INO80D (ENSBMSG00010001021) #23	ENSBMSG00010001036	NDUFS1 (ENSBMSG00010001085) #24	EEF1B2 (ENSBMSG00010001199) #25	CMKLR2 (ENSBMSG00010001229) #26	ZDBF2 (ENSBMSG00010001246) #27	ADAM23 (ENSBMSG00010001305) #28	FAM237A (ENSBMSG00010001408) #29	DYTN (ENSBMSG00010001424) #30	MDH1B (ENSBMSG00010001465) #32	FASTKD2 (ENSBMSG00010001509) #33	KLF7 (ENSBMSG00010001534) #35	CREB1 (ENSBMSG00010001606) #36	METTL21A (ENSBMSG00010001644) #37
Pecora	ANCESTRAL SPECIES	16	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000176171	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Percora_a	ANCESTRAL SPECIES	5	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Bovidae	ANCESTRAL SPECIES	8	ENSGT00940000154319.v.cb	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Bovinae	ANCESTRAL SPECIES	5	ENSGT00940000154319.v.cb	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Bos	ANCESTRAL SPECIES	6	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Bos_b	ANCESTRAL SPECIES	3	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT01100000263480.a.a.b.a.a.a.b.b.a.a.a.a.a.a	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00510000047245.w.a.a.b	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36
Cow	MODERN SPECIES	11	CARF (ENSBTAG00000016000) #12	ENSBTAG00000019994	NBEAL1 (ENSBTAG00000014469) #13	CYP20A1 (ENSBTAG00000000851) #14	ABI2 (ENSBTAG00000011017) #15	RAPH1 (ENSBTAG00000027201) #16	CD28 (ENSBTAG00000007445) #17	ENSBTAG00000051061	CTLA4 (ENSBTAG00000013170) #18	ICOS (ENSBTAG00000021596) #19	ENSBTAG00000040367	ENSBTAG00000051630	ENSBTAG00000049320	PARD3B (ENSBTAG00000010293) #20	ENSBTAG00000053833 #20	NRP2 (ENSBTAG00000011971) #22	INO80D (ENSBTAG00000014407) #23	ENSBTAG00000055132	NDUFS1 (ENSBTAG00000021976) #24	EEF1B2 (ENSBTAG00000021979) #25	CMKLR2 (ENSBTAG00000017043) #26	ZDBF2 (ENSBTAG00000031166) #27	ADAM23 (ENSBTAG00000019694) #28	ENSBTAG00000055316	FAM237A (ENSBTAG00000050134) #29	DYTN (ENSBTAG00000046454) #30	MDH1B (ENSBTAG00000016192) #32	FASTKD2 (ENSBTAG00000016193) #33	CPO (ENSBTAG00000019190) #34	KLF7 (ENSBTAG00000044097) #35	CREB1 (ENSBTAG00000005474) #36
Hybrid Bos Indicus	MODERN SPECIES	11	BMPR2 (ENSBIXG00005031582)	FAM117B (ENSBIXG00005031583) #9	ICA1L (ENSBIXG00005031584) #10	WDR12 (ENSBIXG00005031585) #11	CARF (ENSBIXG00005031586) #12	ENSBIXG00005031587	NBEAL1 (ENSBIXG00005031588) #13	CYP20A1 (ENSBIXG00005031589) #14	ABI2 (ENSBIXG00005031590) #15	RAPH1 (ENSBIXG00005031591) #16	CD28 (ENSBIXG00005031593) #17	CTLA4 (ENSBIXG00005031594) #18	ICOS (ENSBIXG00005031595) #19	PARD3B (ENSBIXG00005031598) #20	ENSBIXG00005031599	NRP2 (ENSBIXG00005031600) #22	INO80D (ENSBIXG00005031603) #23	ENSBIXG00005031604	NDUFS1 (ENSBIXG00005031605) #24	ENSBIXG00005031606 #25	CMKLR2 (ENSBIXG00005031611) #26	ZDBF2 (ENSBIXG00005031612) #27	ADAM23 (ENSBIXG00005031613) #28	ENSBIXG00005031614	DYTN (ENSBIXG00005031615) #30	MDH1B (ENSBIXG00005031616) #32	FASTKD2 (ENSBIXG00005031617) #33	CPO (ENSBIXG00005031618) #34	KLF7 (ENSBIXG00005031620) #35	ENSBIXG00005031623	CREB1 (ENSBIXG00005031624) #36
Bos_a	ANCESTRAL SPECIES	4	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00510000047245.w.a.a.b	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37
Wild yak	MODERN SPECIES	1701															ENSBMUG00000019977 #20	NRP2 (ENSBMUG00000019949) #22	INO80D (ENSBMUG00000019906) #23	NDUFS1 (ENSBMUG00000019884) #24	ENSBMUG00000019833 #25	CMKLR2 (ENSBMUG00000019826) #26
Domestic yak	MODERN SPECIES	11	ICA1L (ENSBGRG00000016892) #10	WDR12 (ENSBGRG00000016744) #11	ENSBGRG00000016729	CARF (ENSBGRG00000016286) #12	ENSBGRG00000016261	NBEAL1 (ENSBGRG00000016043) #13	CYP20A1 (ENSBGRG00000015562) #14	ABI2 (ENSBGRG00000014834) #15	ENSBGRG00000012733 #16	CD28 (ENSBGRG00000012545) #17	CTLA4 (ENSBGRG00000012384) #18	ENSBGRG00000012357	ICOS (ENSBGRG00000012246) #19	ENSBGRG00000012209	PARD3B (ENSBGRG00000011721) #20	NRP2 (ENSBGRG00000010098) #22	ENSBGRG00000010010	INO80D (ENSBGRG00000009960) #23	NDUFS1 (ENSBGRG00000009516) #24	ENSBGRG00000009445 #25	CMKLR2 (ENSBGRG00000009401) #26	ZDBF2 (ENSBGRG00000009322) #27	ENSBGRG00000009270	ADAM23 (ENSBGRG00000008490) #28	FAM237A (ENSBGRG00000008425) #29	MDH1B (ENSBGRG00000008141) #32	FASTKD2 (ENSBGRG00000008051) #33	CPO (ENSBGRG00000007969) #34	ENSBGRG00000007943	KLF7 (ENSBGRG00000007842) #35	CREB1 (ENSBGRG00000007627) #36
American bison	MODERN SPECIES	3330	NOP58 (ENSBBBG00000012170)	BMPR2 (ENSBBBG00000012144)	ENSBBBG00000002273 #9	ENSBBBG00000012094 #9	ICA1L (ENSBBBG00000012090) #10	WDR12 (ENSBBBG00000012064) #11	CARF (ENSBBBG00000012044) #12	NBEAL1 (ENSBBBG00000011985) #13	CYP20A1 (ENSBBBG00000002236) #14	ABI2 (ENSBBBG00000011940) #15	ENSBBBG00000011830 #16	CD28 (ENSBBBG00000002157) #17	CTLA4 (ENSBBBG00000002155) #18	ICOS (ENSBBBG00000011656) #19	PARD3B (ENSBBBG00000011555) #20	NRP2 (ENSBBBG00000011269) #22	INO80D (ENSBBBG00000011164) #23	NDUFS1 (ENSBBBG00000011148) #24	ENSBBBG00000011052 #25	CMKLR2 (ENSBBBG00000011031) #26	ZDBF2 (ENSBBBG00000011029) #27	ADAM23 (ENSBBBG00000011005) #28	FAM237A (ENSBBBG00000010954) #29	DYTN (ENSBBBG00000010949) #30	MDH1B (ENSBBBG00000010925) #32	FASTKD2 (ENSBBBG00000010905) #33	CPO (ENSBBBG00000010898) #34	ENSBBBG00000010890	KLF7 (ENSBBBG00000010885) #35	CREB1 (ENSBBBG00000010873) #36	METTL21A (ENSBBBG00000010854) #37
Caprinae	ANCESTRAL SPECIES	5	ENSGT00940000154319.v.cb	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.b #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Goat	MODERN SPECIES	11	NOP58 (ENSCHIG00000025013)	BMPR2 (ENSCHIG00000020243)	FAM117B (ENSCHIG00000014630) #9	ICA1L (ENSCHIG00000013077) #10	WDR12 (ENSCHIG00000009469) #11	CARF (ENSCHIG00000023655) #12	ENSCHIG00000016764	NBEAL1 (ENSCHIG00000000921) #13	CYP20A1 (ENSCHIG00000022946) #14	ABI2 (ENSCHIG00000002652) #15	RAPH1 (ENSCHIG00000025930) #16	CD28 (ENSCHIG00000024564) #17	CTLA4 (ENSCHIG00000008042) #18	ICOS (ENSCHIG00000024943) #19	PARD3B (ENSCHIG00000007723) #20	NRP2 (ENSCHIG00000016092) #22	INO80D (ENSCHIG00000010718) #23	NDUFS1 (ENSCHIG00000014971) #24	EEF1B2 (ENSCHIG00000026794) #25	CMKLR2 (ENSCHIG00000007661) #26	ZDBF2 (ENSCHIG00000022575) #27	ADAM23 (ENSCHIG00000011689) #28	FAM237A (ENSCHIG00000010865) #29	DYTN (ENSCHIG00000016602) #30	MDH1B (ENSCHIG00000022560) #32	FASTKD2 (ENSCHIG00000015121) #33	ENSCHIG00000003872	ENSCHIG00000026347	CPO (ENSCHIG00000020644) #34	KLF7 (ENSCHIG00000006619) #35	CREB1 (ENSCHIG00000027161) #36
Rambouillet Sheep	MODERN SPECIES	11	NOP58 (ENSOARG00020023408)	BMPR2 (ENSOARG00020006563)	FAM117B (ENSOARG00020006688) #9	ICA1L (ENSOARG00020006778) #10	WDR12 (ENSOARG00020006896) #11	CARF (ENSOARG00020006968) #12	NBEAL1 (ENSOARG00020007440) #13	CYP20A1 (ENSOARG00020007538) #14	ABI2 (ENSOARG00020007596) #15	RAPH1 (ENSOARG00020007863) #16	ENSOARG00020008167	CD28 (ENSOARG00020008197) #17	CTLA4 (ENSOARG00020008302) #18	ICOS (ENSOARG00020008420) #19	PARD3B (ENSOARG00020008587) #20	NRP2 (ENSOARG00020013172) #22	ENSOARG00020013371	INO80D (ENSOARG00020013391) #23	NDUFS1 (ENSOARG00020013502) #24	ENSOARG00020014163 #25	GPR1 (ENSOARG00020014248) #26	ZDBF2 (ENSOARG00020014286) #27	ADAM23 (ENSOARG00020014405) #28	FAM237A (ENSOARG00020014982) #29	DYTN (ENSOARG00020015031) #30	MDH1B (ENSOARG00020015160) #32	FASTKD2 (ENSOARG00020015403) #33	CPO (ENSOARG00020015466) #34	KLF7 (ENSOARG00020015555) #35	CREB1 (ENSOARG00020015664) #36	METTL21A (ENSOARG00020015859) #37
Siberian musk deer	MODERN SPECIES	352											CD28 (ENSMMSG00000016228) #17	CTLA4 (ENSMMSG00000016291) #18	ICOS (ENSMMSG00000016369) #19	ENSMMSG00000016441	PARD3B (ENSMMSG00000016488) #20	NRP2 (ENSMMSG00000016704) #22	INO80D (ENSMMSG00000016888) #23	NDUFS1 (ENSMMSG00000016943) #24	ENSMMSG00000017130 #25	ZDBF2 (ENSMMSG00000017183) #27	ADAM23 (ENSMMSG00000017291) #28	FAM237A (ENSMMSG00000017572) #29	DYTN (ENSMMSG00000017587) #30	MDH1B (ENSMMSG00000017649) #32	FASTKD2 (ENSMMSG00000017717) #33	CPO (ENSMMSG00000017798) #34	KLF7 (ENSMMSG00000017874) #35	ENSMMSG00000017910	CREB1 (ENSMMSG00000017935) #36	ENSMMSG00000017981 #37	ENSMMSG00000018078
Yarkand deer	MODERN SPECIES	31	ICA1L (ENSCHYG00000003466) #10	WDR12 (ENSCHYG00000003428) #11	ENSCHYG00000003419	CARF (ENSCHYG00000003336) #12	NBEAL1 (ENSCHYG00000003290) #13	CYP20A1 (ENSCHYG00000003265) #14	ENSCHYG00000003256	ABI2 (ENSCHYG00000003231) #15	RAPH1 (ENSCHYG00000002595) #16	CD28 (ENSCHYG00000002432) #17	CTLA4 (ENSCHYG00000002394) #18	ICOS (ENSCHYG00000002371) #19	ENSCHYG00000002349	ENSCHYG00000002345	PARD3B (ENSCHYG00000002220) #20	NRP2 (ENSCHYG00000002124) #22	ENSCHYG00000002093	INO80D (ENSCHYG00000002072) #23	NDUFS1 (ENSCHYG00000001983) #24	ENSCHYG00000001947 #25	ENSCHYG00000001938	CMKLR2 (ENSCHYG00000001927) #26	ZDBF2 (ENSCHYG00000001897) #27	ADAM23 (ENSCHYG00000001792) #28	FAM237A (ENSCHYG00000001756) #29	DYTN (ENSCHYG00000001729) #30	ENSCHYG00000001715	MDH1B (ENSCHYG00000001680) #32	FASTKD2 (ENSCHYG00000001648) #33	CPO (ENSCHYG00000001618) #34	KLF7 (ENSCHYG00000001583) #35
Camelidae	ANCESTRAL SPECIES	58	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Alpaca	MODERN SPECIES	2771			BMPR2 (ENSVPAG00000009496)	ENSVPAG00000009497 #9	ICA1L (ENSVPAG00000009498) #10	WDR12 (ENSVPAG00000009500) #11	CARF (ENSVPAG00000009501) #12	ENSVPAG00000009502 #13	ENSVPAG00000009503 #13	CYP20A1 (ENSVPAG00000009505) #14	ABI2 (ENSVPAG00000009506) #15	RAPH1 (ENSVPAG00000009507) #16	CD28 (ENSVPAG00000009510) #17	ICOS (ENSVPAG00000009512) #19	PARD3B (ENSVPAG00000009514) #20	ENSVPAG00000009518 #22
Arabian camel	MODERN SPECIES	31	NOP58 (ENSCDRG00005019373)	ENSCDRG00005019360	BMPR2 (ENSCDRG00005019320)	ENSCDRG00005019289 #9	ENSCDRG00005019283 #9	ICA1L (ENSCDRG00005019255) #10	WDR12 (ENSCDRG00005019221) #11	CARF (ENSCDRG00005019098) #12	NBEAL1 (ENSCDRG00005019031) #13	ABI2 (ENSCDRG00005018744) #15	ENSCDRG00005018577 #16	CD28 (ENSCDRG00005018484) #17	CTLA4 (ENSCDRG00005018448) #18	ICOS (ENSCDRG00005018420) #19	PARD3B (ENSCDRG00005018074) #20	NRP2 (ENSCDRG00005017938) #22	INO80D (ENSCDRG00005017847) #23	NDUFS1 (ENSCDRG00005017509) #24	EEF1B2 (ENSCDRG00005017418) #25	CMKLR2 (ENSCDRG00005017405) #26	ZDBF2 (ENSCDRG00005017378) #27	ADAM23 (ENSCDRG00005016801) #28	FAM237A (ENSCDRG00005016730) #29	DYTN (ENSCDRG00005016665) #30	MDH1B (ENSCDRG00005016545) #32	FASTKD2 (ENSCDRG00005016506) #33	CPO (ENSCDRG00005016423) #34	KLF7 (ENSCDRG00005016375) #35	CREB1 (ENSCDRG00005016249) #36	METTL21A (ENSCDRG00005016143) #37	ENSCDRG00005016106
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00940000153064.b.d	ENSGT01050000244818.s.a	ENSGT01090000260046	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.b
Equus	ANCESTRAL SPECIES	18	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.b ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.b	ENSGT00940000162639
Horse	MODERN SPECIES	9	NOP58 (ENSECAG00000024696)	BMPR2 (ENSECAG00000025141)	ENSECAG00000054476	FAM117B (ENSECAG00000004249) #9	ICA1L (ENSECAG00000009288) #10	WDR12 (ENSECAG00000009547) #11	CARF (ENSECAG00000017624) #12	NBEAL1 (ENSECAG00000020049) #13	CYP20A1 (ENSECAG00000010884) #14	ABI2 (ENSECAG00000018236) #15	ENSECAG00000022376 #16	CD28 (ENSECAG00000022853) #17	CTLA4 (ENSECAG00000003996) #18	ICOS (ENSECAG00000006253) #19	PARD3B (ENSECAG00000008768) #20	NRP2 (ENSECAG00000016824) #22	INO80D (ENSECAG00000015076) #23	NDUFS1 (ENSECAG00000015914) #24	EEF1B2 (ENSECAG00000016653) ##25	CMKLR2 (ENSECAG00000004408) #26	ZDBF2 (ENSECAG00000039959) #27	ADAM23 (ENSECAG00000018514) #28	FAM237A (ENSECAG00000050449) #29	DYTN (ENSECAG00000006820) #30	MDH1B (ENSECAG00000007491) #32	FASTKD2 (ENSECAG00000008822) #33	KLF7 (ENSECAG00000012215) #35	CREB1 (ENSECAG00000013667) #36	METTL21A (ENSECAG00000017536) #37	PLEKHM3 (ENSECAG00000008108)	FZD5 (ENSECAG00000007309)
Donkey	MODERN SPECIES	24	ENSEASG00005028104	BMPR2 (ENSEASG00005002457)	FAM117B (ENSEASG00005031822) #9	ICA1L (ENSEASG00005002554) #10	ENSEASG00005027147 #10	WDR12 (ENSEASG00005002567) #11	CARF (ENSEASG00005002591) #12	NBEAL1 (ENSEASG00005002684) #13	CYP20A1 (ENSEASG00005002770) #14	ABI2 (ENSEASG00005002778) #15	ENSEASG00005002800 #16	CD28 (ENSEASG00005002842) #17	CTLA4 (ENSEASG00005002849) #18	ICOS (ENSEASG00005002854) #19	PARD3B (ENSEASG00005002870) #20	NRP2 (ENSEASG00005002875) #22	INO80D (ENSEASG00005002880) #23	NDUFS1 (ENSEASG00005002883) #24	EEF1B2 (ENSEASG00005026194) ##25	CMKLR2 (ENSEASG00005002916) #26	ZDBF2 (ENSEASG00005023969) #27	ADAM23 (ENSEASG00005002928) #28	FAM237A (ENSEASG00005002935) #29	DYTN (ENSEASG00005002938) #30	MDH1B (ENSEASG00005002948) #32	FASTKD2 (ENSEASG00005002958) #33	KLF7 (ENSEASG00005002973) #35	CREB1 (ENSEASG00005002983) #36	ENSEASG00005024979 #37	CCNYL1 (ENSEASG00005003014)	FZD5 (ENSEASG00005003041)
Chiroptera	ANCESTRAL SPECIES	11	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Megabat	MODERN SPECIES	152																NRP2 (ENSPVAG00000006389) #22	INO80D (ENSPVAG00000006390) #23
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.a.a
Greater horseshoe bat	MODERN SPECIES	26	NOP58 (ENSRFEG00010014939)	RPL39_1 (ENSRFEG00010014922)	BMPR2 (ENSRFEG00010014707)	FAM117B (ENSRFEG00010014554) #9	ICA1L (ENSRFEG00010014466) #10	WDR12 (ENSRFEG00010014405) #11	CARF (ENSRFEG00010013855) #12	NBEAL1 (ENSRFEG00010013724) #13	CYP20A1 (ENSRFEG00010013600) #14	ABI2 (ENSRFEG00010013372) #15	RAPH1 (ENSRFEG00010013239) #16	CD28 (ENSRFEG00010013138) #17	ENSRFEG00010013108 #18	ICOS (ENSRFEG00010013045) #19	PARD3B (ENSRFEG00010012777) #20	NRP2 (ENSRFEG00010012560) #22	INO80D (ENSRFEG00010012508) #23	NDUFS1 (ENSRFEG00010011973) #24	EEF1B2 (ENSRFEG00010011873) #25	CMKLR2 (ENSRFEG00010011856) #26	ENSRFEG00010011751 #27	ADAM23 (ENSRFEG00010010998) #28	FAM237A (ENSRFEG00010010918) #29	DYTN (ENSRFEG00010010740) #30	MDH1B (ENSRFEG00010010537) #32	FASTKD2 (ENSRFEG00010010475) #33	CPO (ENSRFEG00010010427) #34	KLF7 (ENSRFEG00010010310) #35	CREB1 (ENSRFEG00010020193) #36	ENSRFEG00010020167	METTL21A (ENSRFEG00010020119) #37
Microbat	MODERN SPECIES	940	WDR12 (ENSMLUG00000025847) #11	CARF (ENSMLUG00000007015) #12	NBEAL1 (ENSMLUG00000007434) #13	CYP20A1 (ENSMLUG00000014996) #14	ABI2 (ENSMLUG00000008117) #15	RAPH1 (ENSMLUG00000008162) #16	CD28 (ENSMLUG00000004329) #17	CTLA4 (ENSMLUG00000009619) #18	ICOS (ENSMLUG00000009627) #19	ENSMLUG00000024002	ENSMLUG00000025717 #20	ENSMLUG00000013841 #20	ENSMLUG00000026514	ENSMLUG00000022709 #20	ENSMLUG00000028553 #20	NRP2 (ENSMLUG00000013862) #22	INO80D (ENSMLUG00000007714) #23	NDUFS1 (ENSMLUG00000016594) #24	ENSMLUG00000016602 #25	CMKLR2 (ENSMLUG00000016607) #26	ENSMLUG00000023597	ZDBF2 (ENSMLUG00000014265) #27	ADAM23 (ENSMLUG00000009364) #28	FAM237A (ENSMLUG00000030140) #29	DYTN (ENSMLUG00000028179) #30	MDH1B (ENSMLUG00000009390) #32	FASTKD2 (ENSMLUG00000009411) #33	CPO (ENSMLUG00000009428) #34	KLF7 (ENSMLUG00000009436) #35	CREB1 (ENSMLUG00000016119) #36	METTL21A (ENSMLUG00000015747) #37
Carnivora	ANCESTRAL SPECIES	17	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00940000157820.a.a	ENSGT00530000063873.A #17	ENSGT01090000260046	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Felidae	ANCESTRAL SPECIES	15	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00940000157820.a.a	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.o #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Panthera	ANCESTRAL SPECIES	9	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00520000059926.a.b	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.o #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00520000059926.a.b	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.o #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
leopard	MODERN SPECIES	12							NBEAL1 (ENSPPRG00000024650) #13	CYP20A1 (ENSPPRG00000024582) #14	ABI2 (ENSPPRG00000024330) #15	ENSPPRG00000023758 #16	CD28 (ENSPPRG00000023378) #17	CTLA4 (ENSPPRG00000023337) #18	ICOS (ENSPPRG00000023149) #19	ENSPPRG00000020852	PARD3B (ENSPPRG00000001193) #20	NRP2 (ENSPPRG00000001684) #22	INO80D (ENSPPRG00000001843) #23	NDUFS1 (ENSPPRG00000003837) #24	ENSPPRG00000004175 #25	CMKLR2 (ENSPPRG00000020893) #26	ADAM23 (ENSPPRG00000004864) #28	FAM237A (ENSPPRG00000005451) #29	DYTN (ENSPPRG00000005491) #30	MDH1B (ENSPPRG00000005932) #32	FASTKD2 (ENSPPRG00000006075) #33	CPO (ENSPPRG00000006106) #34	KLF7 (ENSPPRG00000006377) #35	CREB1 (ENSPPRG00000006712) #36	METTL21A (ENSPPRG00000006796) #37	ENSPPRG00000007043	PLEKHM3 (ENSPPRG00000007268)
lion	MODERN SPECIES	8	NOP58 (ENSPLOG00000011950)	BMPR2 (ENSPLOG00000011747)	FAM117B (ENSPLOG00000011690) #9	ICA1L (ENSPLOG00000011556) #10	WDR12 (ENSPLOG00000011514) #11	CARF (ENSPLOG00000011224) #12	NBEAL1 (ENSPLOG00000010825) #13	CYP20A1 (ENSPLOG00000010756) #14	ABI2 (ENSPLOG00000010377) #15	ENSPLOG00000010151 #16	CD28 (ENSPLOG00000010049) #17	CTLA4 (ENSPLOG00000010005) #18	ICOS (ENSPLOG00000009959) #19	ENSPLOG00000009936	PARD3B (ENSPLOG00000008780) #20	NRP2 (ENSPLOG00000008415) #22	INO80D (ENSPLOG00000008354) #23	NDUFS1 (ENSPLOG00000008138) #24	ENSPLOG00000008015	ENSPLOG00000007981 #25	CMKLR2 (ENSPLOG00000007963) #26	ZDBF2 (ENSPLOG00000007898) #27	ENSPLOG00000007877	ADAM23 (ENSPLOG00000007574) #28	FAM237A (ENSPLOG00000007523) #29	DYTN (ENSPLOG00000007459) #30	MDH1B (ENSPLOG00000007375) #32	FASTKD2 (ENSPLOG00000007345) #33	CPO (ENSPLOG00000007242) #34	KLF7 (ENSPLOG00000007130) #35	CREB1 (ENSPLOG00000007090) #36
Tiger	MODERN SPECIES	313	BMPR2 (ENSPTIG00000013082)	ENSPTIG00000008227 #9	ICA1L (ENSPTIG00000013050) #10	WDR12 (ENSPTIG00000013035) #11	CARF (ENSPTIG00000012946) #12	ENSPTIG00000008218	NBEAL1 (ENSPTIG00000012887) #13	CYP20A1 (ENSPTIG00000012850) #14	ABI2 (ENSPTIG00000012734) #15	ENSPTIG00000012473 #16	CD28 (ENSPTIG00000012428) #17	CTLA4 (ENSPTIG00000012408) #18	ICOS (ENSPTIG00000012385) #19	ENSPTIG00000008211	PARD3B (ENSPTIG00000012297) #20	NRP2 (ENSPTIG00000012139) #22	INO80D (ENSPTIG00000012089) #23	NDUFS1 (ENSPTIG00000012021) #24	ENSPTIG00000011994 #25	CMKLR2 (ENSPTIG00000008203) #26	ADAM23 (ENSPTIG00000011931) #28	FAM237A (ENSPTIG00000011920) #29	DYTN (ENSPTIG00000011914) #30	MDH1B (ENSPTIG00000011902) #32	FASTKD2 (ENSPTIG00000011891) #33	CPO (ENSPTIG00000011884) #34	KLF7 (ENSPTIG00000011869) #35	CREB1 (ENSPTIG00000011848) #36	METTL21A (ENSPTIG00000011823) #37	ENSPTIG00000011797	PLEKHM3 (ENSPTIG00000011775)
Cat	MODERN SPECIES	239	FAM117B (ENSFCAG00000046269) #9	ICA1L (ENSFCAG00000008514) #10	WDR12 (ENSFCAG00000026676) #11	CARF (ENSFCAG00000046458) #12	NBEAL1 (ENSFCAG00000025997) #13	ENSFCAG00000027770	ENSFCAG00000048141	CYP20A1 (ENSFCAG00000022927) #14	ABI2 (ENSFCAG00000012982) #15	RAPH1 (ENSFCAG00000019050) #16	ENSFCAG00000034107	CD28 (ENSFCAG00000014271) #17	CTLA4 (ENSFCAG00000014272) #18	ICOS (ENSFCAG00000038001) #19	PARD3B (ENSFCAG00000025870) #20	NRP2 (ENSFCAG00000000423) #22	INO80D (ENSFCAG00000022035) #23	NDUFS1 (ENSFCAG00000023344) #24	EEF1B2 (ENSFCAG00000010239) #25	CMKLR2 (ENSFCAG00000028762) #26	ZDBF2 (ENSFCAG00000041779) #27	ADAM23 (ENSFCAG00000018551) #28	DYTN (ENSFCAG00000024422) #30	MDH1B (ENSFCAG00000015372) #32	FASTKD2 (ENSFCAG00000015373) #33	CPO (ENSFCAG00000002513) #34	KLF7 (ENSFCAG00000002514) #35	CREB1 (ENSFCAG00000008220) #36	METTL21A (ENSFCAG00000035900) #37	CCNYL1 (ENSFCAG00000028003)	ENSFCAG00000039577
Caniformia	ANCESTRAL SPECIES	14	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00940000157820.a.a	ENSGT00530000063873.A #17	ENSGT01090000260046	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Canidae	ANCESTRAL SPECIES	20	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT01090000260046.e.a.a.b	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.q #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Canis_lupus	ANCESTRAL SPECIES	32	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000154694.l.b.b.a.a.b	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.q #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Dingo	MODERN SPECIES	398	FAM117B (ENSCAFG00020002101) #9	ICA1L (ENSCAFG00020002040) #10	WDR12 (ENSCAFG00020001958) #11	CARF (ENSCAFG00020001932) #12	ENSCAFG00020001912	NBEAL1 (ENSCAFG00020001831) #13	CYP20A1 (ENSCAFG00020001812) #14	ENSCAFG00020001801	ENSCAFG00020001784	ABI2 (ENSCAFG00020001752) #15	RAPH1 (ENSCAFG00020001630) #16	CD28 (ENSCAFG00020001531) #17	CTLA4 (ENSCAFG00020001506) #18	ICOS (ENSCAFG00020001489) #19	PARD3B (ENSCAFG00020001089) #20	NRP2 (ENSCAFG00020000746) #22	INO80D (ENSCAFG00020000661) #23	NDUFS1 (ENSCAFG00020000642) #24	EEF1B2 (ENSCAFG00020000617) #25	CMKLR2 (ENSCAFG00020000614) #26	ZDBF2 (ENSCAFG00020000545) #27	ADAM23 (ENSCAFG00020000240) #28	FAM237A (ENSCAFG00020000156) #29	DYTN (ENSCAFG00020027434) #30	MDH1B (ENSCAFG00020027429) #32	FASTKD2 (ENSCAFG00020027426) #33	CPO (ENSCAFG00020027425) #34	KLF7 (ENSCAFG00020027423) #35	CREB1 (ENSCAFG00020027420) #36	METTL21A (ENSCAFG00020027418) #37	ENSCAFG00020027415
Dog	MODERN SPECIES	30	WDR12 (ENSCAFG00845015685) #11	CARF (ENSCAFG00845015868) #12	ENSCAFG00845016161	NBEAL1 (ENSCAFG00845016248) #13	CYP20A1 (ENSCAFG00845016438) #14	ENSCAFG00845016541	ABI2 (ENSCAFG00845016661) #15	ENSCAFG00845016782	ENSCAFG00845016818	RAPH1 (ENSCAFG00845017225) #16	ENSCAFG00845017896	CD28 (ENSCAFG00845018097) #17	CTLA4 (ENSCAFG00845018252) #18	ICOS (ENSCAFG00845018403) #19	PARD3B (ENSCAFG00845018916) #20	NRP2 (ENSCAFG00845019968) #22	INO80D (ENSCAFG00845020375) #23	NDUFS1 (ENSCAFG00845020511) #24	EEF1B2 (ENSCAFG00845020822) #25	GPR1 (ENSCAFG00845020895) #26	ZDBF2 (ENSCAFG00845020911) #27	ADAM23 (ENSCAFG00845021040) #28	FAM237A (ENSCAFG00845021430) #29	DYTN (ENSCAFG00845021457) #30	MDH1B (ENSCAFG00845021551) #32	FASTKD2 (ENSCAFG00845021685) #33	CPO (ENSCAFG00845021788) #34	KLF7 (ENSCAFG00845021900) #35	CREB1 (ENSCAFG00845022020) #36	METTL21A (ENSCAFG00845022171) #37	CCNYL1 (ENSCAFG00845022326)
Red fox	MODERN SPECIES	41	ICA1L (ENSVVUG00000018171) #10	WDR12 (ENSVVUG00000018074) #11	CARF (ENSVVUG00000017926) #12	ENSVVUG00000017885 #13	NBEAL1 (ENSVVUG00000017646) #13	CYP20A1 (ENSVVUG00000017336) #14	ENSVVUG00000017318	ENSVVUG00000017315	ABI2 (ENSVVUG00000017312) #15	RAPH1 (ENSVVUG00000017063) #16	CD28 (ENSVVUG00000017013) #17	ENSVVUG00000017012	CTLA4 (ENSVVUG00000017009) #18	ICOS (ENSVVUG00000017004) #19	PARD3B (ENSVVUG00000016975) #20	NRP2 (ENSVVUG00000016946) #22	INO80D (ENSVVUG00000016931) #23	NDUFS1 (ENSVVUG00000016918) #24	EEF1B2 (ENSVVUG00000016896) #25	GPR1 (ENSVVUG00000016890) #26	ZDBF2 (ENSVVUG00000016880) #27
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00940000157820.a.a	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Mustelinae	ANCESTRAL SPECIES	44	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Ferret	MODERN SPECIES	265	FAM117B (ENSMPUG00000000358) #9	ICA1L (ENSMPUG00000000375) #10	WDR12 (ENSMPUG00000000379) #11	CARF (ENSMPUG00000000382) #12	NBEAL1 (ENSMPUG00000000385) #13	ENSMPUG00000000395 #14	ENSMPUG00000000397 #14	ABI2 (ENSMPUG00000000402) #15	RAPH1 (ENSMPUG00000000405) #16	CD28 (ENSMPUG00000000418) #17	CTLA4 (ENSMPUG00000000422) #18	ICOS (ENSMPUG00000000425) #19	ENSMPUG00000000428	ENSMPUG00000000430 ##20	PARD3B (ENSMPUG00000000432) #20	NRP2 (ENSMPUG00000000435) #22	ENSMPUG00000000437	INO80D (ENSMPUG00000000439) #23	NDUFS1 (ENSMPUG00000000442) #24	EEF1B2 (ENSMPUG00000000444) #25	CMKLR2 (ENSMPUG00000018909) #26	ZDBF2 (ENSMPUG00000000463) #27	ADAM23 (ENSMPUG00000000467) #28	ENSMPUG00000000471	MDH1B (ENSMPUG00000000473) #32	FASTKD2 (ENSMPUG00000000477) #33	CPO (ENSMPUG00000000481) #34	KLF7 (ENSMPUG00000000483) #35	CREB1 (ENSMPUG00000000485) #36	ENSMPUG00000018911	ENSMPUG00000000487 #37
American mink	MODERN SPECIES	40	BMPR2 (ENSNVIG00000007469)	ENSNVIG00000007447 #9	ENSNVIG00000007441 #9	ICA1L (ENSNVIG00000007376) #10	WDR12 (ENSNVIG00000007326) #11	F6SXV3 (ENSNVIG00000007220) #12	NBEAL1 (ENSNVIG00000007140) #13	CYP20A1 (ENSNVIG00000007093) #14	ABI2 (ENSNVIG00000006920) #15	RAPH1 (ENSNVIG00000006475) #16	ENSNVIG00000006462	CD28 (ENSNVIG00000006426) #17	CTLA4 (ENSNVIG00000006392) #18	ICOS (ENSNVIG00000006380) #19	PARD3B (ENSNVIG00000005889) #20	NRP2 (ENSNVIG00000005651) #22	INO80D (ENSNVIG00000005634) #23	NDUFS1 (ENSNVIG00000005404) #24	EEF1B2 (ENSNVIG00000005362) #25	GPR1 (ENSNVIG00000005355) #26	ZDBF2 (ENSNVIG00000005326) #27	ADAM23 (ENSNVIG00000005209) #28	FAM237A (ENSNVIG00000005198) #29	DYTN (ENSNVIG00000005190) #30	MDH1B (ENSNVIG00000005145) #32	FASTKD2 (ENSNVIG00000005116) #33	CBPO (ENSNVIG00000005106) #34	KLF7 (ENSNVIG00000005091) #35	CREB1 (ENSNVIG00000005058) #36	METTL21A (ENSNVIG00000005027) #37	ENSNVIG00000005020
Ursidae	ANCESTRAL SPECIES	7	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00940000157820.a.a.k	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37	ENSGT00940000154453.b.b
Giant Panda	MODERN SPECIES	11	BMPR2 (ENSAMEG00000013148)	ENSAMEG00000013132 #9	ENSAMEG00000026389 #9	ICA1L (ENSAMEG00000013120) #10	WDR12 (ENSAMEG00000013091) #11	CARF (ENSAMEG00000013068) #12	NBEAL1 (ENSAMEG00000013020) #13	ABI2 (ENSAMEG00000012960) #15	ENSAMEG00000002970 #16	ENSAMEG00000030945	ENSAMEG00000028551	CD28 (ENSAMEG00000002955) #17	CTLA4 (ENSAMEG00000002942) #18	ICOS (ENSAMEG00000002936) #19	PARD3B (ENSAMEG00000002930) #20	NRP2 (ENSAMEG00000003086) #22	INO80D (ENSAMEG00000003072) #23	NDUFS1 (ENSAMEG00000003030) #24	ENSAMEG00000003015 #25	ZDBF2 (ENSAMEG00000029468) #27	CMKLR2 (ENSAMEG00000003011) #26	ADAM23 (ENSAMEG00000002950) #28	FAM237A (ENSAMEG00000029073) #29	DYTN (ENSAMEG00000025472) #30	MDH1B (ENSAMEG00000002932) #32	FASTKD2 (ENSAMEG00000002917) #33	CPO (ENSAMEG00000015096) #34	KLF7 (ENSAMEG00000015148) #35	CREB1 (ENSAMEG00000015152) #36	METTL21A (ENSAMEG00000015168) #37	ENSAMEG00000015175
Ursus	ANCESTRAL SPECIES	4	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a #9	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #13	ENSGT00500000044939 #14	ENSGT00940000156089 #15	ENSGT00940000156552 #16	ENSGT00940000157820.a.a.k	ENSGT00530000063873.A #17	ENSGT00530000063873.B #18	ENSGT00390000000801 #19	ENSGT00950000183214.a.b.a.b #20	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #32	ENSGT01030000234607.A.b #33	ENSGT00940000161508 #34	ENSGT00940000155235 #35	ENSGT00940000155408 #36	ENSGT00940000157249 #37
Polar bear	MODERN SPECIES	142	ENSUMAG00000021893 #9	ENSUMAG00000021898 #9	ICA1L (ENSUMAG00000021899) #10	WDR12 (ENSUMAG00000021904) #11	CARF (ENSUMAG00000021907) #12	ENSUMAG00000021909 #13	NBEAL1 (ENSUMAG00000021925) #13	CYP20A1 (ENSUMAG00000022062) #14	ABI2 (ENSUMAG00000022146) #15	RAPH1 (ENSUMAG00000022157) #16	ENSUMAG00000022213	CD28 (ENSUMAG00000022222) #17	CTLA4 (ENSUMAG00000022223) #18	ICOS (ENSUMAG00000022228) #19	PARD3B (ENSUMAG00000022273) #20	NRP2 (ENSUMAG00000022446) #22	ENSUMAG00000022452	INO80D (ENSUMAG00000022462) #23	NDUFS1 (ENSUMAG00000022473) #24	EEF1B2 (ENSUMAG00000022481) #25	ZDBF2 (ENSUMAG00000022505) #27	ADAM23 (ENSUMAG00000022533) #28	FAM237A (ENSUMAG00000022571) #29	DYTN (ENSUMAG00000022576) #30	MDH1B (ENSUMAG00000022585) #32	FASTKD2 (ENSUMAG00000022590) #33	CPO (ENSUMAG00000022606) #34	KLF7 (ENSUMAG00000022629) #35	METTL21A (ENSUMAG00000022649) #37	CREB1 (ENSUMAG00000022656) #36	ENSUMAG00000022665
American black bear	DUPLICATION
American black bear	MODERN SPECIES	3124															ENSUAMG00000016631	NRP2 (ENSUAMG00000016625) #22
American black bear	MODERN SPECIES	6049																ENSUAMG00000012305 #22