Murinae	ANCESTRAL SPECIES	9	ENSGT00940000154319.v #7	ENSGT00940000153534.A #8	ENSGT00940000156449 #9	ENSGT00950000183046.a.a #10	ENSGT00390000005530.a.a #11	ENSGT00930000150950.b	ENSGT00390000013916 #13	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B	ENSGT00940000162403 #29	ENSGT00530000063410.b #30	ENSGT01030000234607.A.b #31	ENSGT00940000155235 #33	ENSGT00940000155408 #34	ENSGT00940000157249 #35	ENSGT00940000154453.b.a.a #36	ENSGT00940000162639 #37
Mus	ANCESTRAL SPECIES	5	ENSGT00940000154319.v #7	ENSGT00940000153534.A #8	ENSGT00940000156449 #9	ENSGT00950000183046.a.a #10	ENSGT00390000005530.a.a #11	ENSGT00930000150950.b	ENSGT00390000013916 #13	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B	ENSGT00940000162403 #29	ENSGT00530000063410.b #30	ENSGT01030000234607.A.b #31	ENSGT00860000135862 #32	ENSGT00940000155235 #33	ENSGT00940000155408 #34	ENSGT00940000157249 #35	ENSGT00940000154453.b.a.a #36
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000154319.v #7	ENSGT00940000153534.A #8	ENSGT00940000156449 #9	ENSGT00950000183046.a.a #10	ENSGT00390000005530.a.a #11	ENSGT00930000150950.b	ENSGT00390000013916 #13	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B	ENSGT00940000162403 #29	ENSGT00530000063410.b #30	ENSGT01030000234607.A.b #31	ENSGT00860000135862 #32	ENSGT00940000155235 #33	ENSGT00940000155408 #34	ENSGT00940000157249 #35	ENSGT00940000154453.b.a.a.c #36
Ryukyu mouse	MODERN SPECIES		Sumo1 (MGP_CAROLIEiJ_G0014180) #7	Nop58 (MGP_CAROLIEiJ_G0014181) #8	Bmpr2 (MGP_CAROLIEiJ_G0014182) #9	Fam117b (MGP_CAROLIEiJ_G0014183) #10	MGP_CAROLIEiJ_G0014184 #11	MGP_CAROLIEiJ_G0014185 #12	Carf (MGP_CAROLIEiJ_G0014186) #13	Nbeal1 (MGP_CAROLIEiJ_G0014187) #14	Cyp20a1 (MGP_CAROLIEiJ_G0014188) #15	Abi2 (MGP_CAROLIEiJ_G0014189) #16	Raph1 (MGP_CAROLIEiJ_G0014190) #17	Cd28 (MGP_CAROLIEiJ_G0014191) #18	Ctla4 (MGP_CAROLIEiJ_G0014192) #19	Icos (MGP_CAROLIEiJ_G0014193) #20	Pard3b (MGP_CAROLIEiJ_G0014194) #21	Nrp2 (MGP_CAROLIEiJ_G0014195) #22	Ino80d (MGP_CAROLIEiJ_G0014196) #23	Ndufs1 (MGP_CAROLIEiJ_G0014197) #24	Eef1b2 (MGP_CAROLIEiJ_G0014198) #25	Cmklr2 (MGP_CAROLIEiJ_G0014199) #26	Zdbf2 (MGP_CAROLIEiJ_G0014200) #27	Adam23 (MGP_CAROLIEiJ_G0014201) #28	Dytn (MGP_CAROLIEiJ_G0014202) #29	Mdh1b (MGP_CAROLIEiJ_G0014203) #30	Fastkd2 (MGP_CAROLIEiJ_G0014204) #31	MGP_CAROLIEiJ_G0014205 #32	Klf7 (MGP_CAROLIEiJ_G0014206) #33	Creb1 (MGP_CAROLIEiJ_G0014207) #34	Mettl21a (MGP_CAROLIEiJ_G0014208) #35	Ccnyl1 (MGP_CAROLIEiJ_G0014209) #36	Fzd5 (MGP_CAROLIEiJ_G0014210) #37
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000154319.v #7	ENSGT00940000153534.A #8	ENSGT00940000156449 #9	ENSGT00950000183046.a.a #10	ENSGT00390000005530.a.a #11	ENSGT00930000150950.b	ENSGT00390000013916 #13	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089.l #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B	ENSGT00940000162403 #29	ENSGT00530000063410.b #30	ENSGT01030000234607.A.b #31	ENSGT00860000135862 #32	ENSGT00940000155235 #33	ENSGT00940000155408 #34	ENSGT00940000157249 #35	ENSGT00940000154453.b.a.a.c #36
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000154319.v #7	ENSGT00940000153534.A #8	ENSGT00940000156449 #9	ENSGT00950000183046.a.a #10	ENSGT00390000005530.a.a #11	ENSGT00930000150950.b	ENSGT00390000013916 #13	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089.l #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B	ENSGT00940000162403 #29	ENSGT00530000063410.b #30	ENSGT01030000234607.A.b #31	ENSGT00860000135862 #32	ENSGT00940000155235 #33	ENSGT00940000155408 #34	ENSGT00940000157249 #35	ENSGT00940000154453.b.a.a.c #36
spretus	MODERN SPECIES		Sumo1 (MGP_SPRETEiJ_G0014987) #7	Nop58 (MGP_SPRETEiJ_G0014988) #8	Bmpr2 (MGP_SPRETEiJ_G0014989) #9	MGP_SPRETEiJ_G0014990 ##10	Ica1l (MGP_SPRETEiJ_G0014991) #11	Wdr12 (MGP_SPRETEiJ_G0014992)	Carf (MGP_SPRETEiJ_G0014993) #13	Nbeal1 (MGP_SPRETEiJ_G0014994) #14	Cyp20a1 (MGP_SPRETEiJ_G0014995) #15	Abi2 (MGP_SPRETEiJ_G0014996) #16	Raph1 (MGP_SPRETEiJ_G0014997) #17	Cd28 (MGP_SPRETEiJ_G0014998) #18	Ctla4 (MGP_SPRETEiJ_G0014999) #19	Icos (MGP_SPRETEiJ_G0015000) #20	Pard3b (MGP_SPRETEiJ_G0015001) #21	Nrp2 (MGP_SPRETEiJ_G0015002) #22	Ino80d (MGP_SPRETEiJ_G0015003) #23	Ndufs1 (MGP_SPRETEiJ_G0015004) #24	Eef1b2 (MGP_SPRETEiJ_G0015005) #25	Cmklr2 (MGP_SPRETEiJ_G0015006) #26	Zdbf2 (MGP_SPRETEiJ_G0015007) #27	Adam23 (MGP_SPRETEiJ_G0015008) #28	Dytn (MGP_SPRETEiJ_G0015009) #29	Mdh1b (MGP_SPRETEiJ_G0015010) #30	Fastkd2 (MGP_SPRETEiJ_G0015011) #31	MGP_SPRETEiJ_G0015012 #32	Klf7 (MGP_SPRETEiJ_G0015013) #33	Creb1 (MGP_SPRETEiJ_G0015014) #34	Mettl21a (MGP_SPRETEiJ_G0015015) #35	Ccnyl1 (MGP_SPRETEiJ_G0015016) #36	Fzd5 (MGP_SPRETEiJ_G0015017) #37
Steppe mouse	MODERN SPECIES	44	Fam117b (ENSMSIG00000010018) #10	Ica1l (ENSMSIG00000010027) #11	Wdr12 (ENSMSIG00000010103)	Carf (ENSMSIG00000010210) #13	ENSMSIG00000010287	Nbeal1 (ENSMSIG00000010304) #14	Cyp20a1 (ENSMSIG00000010618) #15	ENSMSIG00000010702 #16	Raph1 (ENSMSIG00000010756) #17	Cd28 (ENSMSIG00000011356) #18	ENSMSIG00000011370	Ctla4 (ENSMSIG00000011388) #19	Icos (ENSMSIG00000011424) #20	Pard3b (ENSMSIG00000011469) #21	ENSMSIG00000011764	Nrp2 (ENSMSIG00000011775) #22	Ino80d (ENSMSIG00000012604) #23	Ndufs1 (ENSMSIG00000012674) #24	Eef1b2 (ENSMSIG00000012804) #25	Cmklr2 (ENSMSIG00000012880) #26	Zdbf2 (ENSMSIG00000012889) #27	ENSMSIG00000012937	Adam23 (ENSMSIG00000012957) #28	ENSMSIG00000013264	Gm39653 (ENSMSIG00000013270)	Dytn (ENSMSIG00000013289) #29
Mouse	MODERN SPECIES		Sumo1 (ENSMUSG00000026021) #7	Nop58 (ENSMUSG00000026020) #8	Bmpr2 (ENSMUSG00000067336) #9	Fam117b (ENSMUSG00000041040) #10	Ica1l (ENSMUSG00000026018) #11	Wdr12 (ENSMUSG00000026019)	Carf (ENSMUSG00000026017) #13	Nbeal1 (ENSMUSG00000073664) #14	Cyp20a1 (ENSMUSG00000049439) #15	Abi2 (ENSMUSG00000026782) #16	Raph1 (ENSMUSG00000026014) #17	Cd28 (ENSMUSG00000026012) #18	Ctla4 (ENSMUSG00000026011) #19	Icos (ENSMUSG00000026009) #20	Pard3b (ENSMUSG00000052062) #21	Nrp2 (ENSMUSG00000025969) #22	Ino80d (ENSMUSG00000040865) #23	Ndufs1 (ENSMUSG00000025968) #24	Eef1b2 (ENSMUSG00000025967) #25	Cmklr2 (ENSMUSG00000046856) #26	Zdbf2 (ENSMUSG00000027520) #27	Adam23 (ENSMUSG00000025964) #28	Gm39653 (ENSMUSG00000115378)	Dytn (ENSMUSG00000069085) #29	Mdh1b (ENSMUSG00000025963) #30	Fastkd2 (ENSMUSG00000025962) #31	Klf7 (ENSMUSG00000025959) #33	Creb1 (ENSMUSG00000025958) #34	Mettl21a (ENSMUSG00000025956) #35	Ccnyl1 (ENSMUSG00000070871) #36	Fzd5 (ENSMUSG00000045005) #37
Shrew mouse	MODERN SPECIES	18	MGP_PahariEiJ_G0027418 #7	Nop58 (MGP_PahariEiJ_G0027419) #8	Bmpr2 (MGP_PahariEiJ_G0027420) #9	Fam117b (MGP_PahariEiJ_G0027421) #10	MGP_PahariEiJ_G0027422 #11	MGP_PahariEiJ_G0027423	Carf (MGP_PahariEiJ_G0027424) #13	MGP_PahariEiJ_G0027425 #14	Cyp20a1 (MGP_PahariEiJ_G0027426) #15	Abi2 (MGP_PahariEiJ_G0027427) #16	Raph1 (MGP_PahariEiJ_G0027428) #17	Cd28 (MGP_PahariEiJ_G0027429) #18	Ctla4 (MGP_PahariEiJ_G0027430) #19	MGP_PahariEiJ_G0027431 #20	Pard3b (MGP_PahariEiJ_G0027432) #21	Nrp2 (MGP_PahariEiJ_G0027433) #22	Ino80d (MGP_PahariEiJ_G0027434) #23	MGP_PahariEiJ_G0027435 #24	Eef1b2 (MGP_PahariEiJ_G0027436) #25	Cmklr2 (MGP_PahariEiJ_G0027437) #26	Zdbf2 (MGP_PahariEiJ_G0027438) #27	Adam23 (MGP_PahariEiJ_G0027439) #28	Dytn (MGP_PahariEiJ_G0027440) #29	Mdh1b (MGP_PahariEiJ_G0027441) #30	Fastkd2 (MGP_PahariEiJ_G0027442) #31	MGP_PahariEiJ_G0027443 #32	Klf7 (MGP_PahariEiJ_G0027444) #33	Creb1 (MGP_PahariEiJ_G0027445) #34	Mettl21a (MGP_PahariEiJ_G0027446) #35	Ccnyl1 (MGP_PahariEiJ_G0027447) #36	Fzd5 (MGP_PahariEiJ_G0027448) #37
Rat	MODERN SPECIES	19	Bmpr2 (ENSRNOG00000022196) #9	ENSRNOG00000066953	LOC301444 (ENSRNOG00000019107)	Fam117b (ENSRNOG00000022066) #10	Ica1l (ENSRNOG00000017258) #11	Wdr12 (ENSRNOG00000017340)	Carf (ENSRNOG00000017491) #13	Nbeal1 (ENSRNOG00000021525) #14	Cyp20a1 (ENSRNOG00000017631) #15	Abi2 (ENSRNOG00000017707) #16	Raph1 (ENSRNOG00000014722) #17	Cd28 (ENSRNOG00000010283) #18	Ctla4 (ENSRNOG00000054129) #19	Icos (ENSRNOG00000046196) #20	Pard3b (ENSRNOG00000024345) #21	Nrp2 (ENSRNOG00000031232) #22	Rpl37-ps5 (ENSRNOG00000033803)	Ino80d (ENSRNOG00000024272) #23	Ndufs1 (ENSRNOG00000011849) #24	Eef1b2 (ENSRNOG00000024186) #25	Cmklr2 (ENSRNOG00000045532) #26	Zdbf2 (ENSRNOG00000024114) #27	Adam23 (ENSRNOG00000012424) #28	Fam237a (ENSRNOG00000054699)	Dytn (ENSRNOG00000042181) #29	Mdh1b (ENSRNOG00000012891) #30	ENSRNOG00000063009	Fastkd2 (ENSRNOG00000023923) #31	ENSRNOG00000063607	Klf7 (ENSRNOG00000046242) #33	LOC103690545 (ENSRNOG00000064370)