Amniota	ANCESTRAL SPECIES	6	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00390000003964.b	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37
Mammalia	ANCESTRAL SPECIES	6	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37
Theria	ANCESTRAL SPECIES	5	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37
Eutheria	ANCESTRAL SPECIES	10	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT01090000263468	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT01090000260046	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.b ##37
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Glires	ANCESTRAL SPECIES	14	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Rodentia	ANCESTRAL SPECIES	14	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Myomorpha	ANCESTRAL SPECIES	10	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Muroidea	ANCESTRAL SPECIES	20	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37	ENSGT00940000162639
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37	ENSGT00940000162639
Cricetidae	ANCESTRAL SPECIES	19	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37	ENSGT00940000162639
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37	ENSGT00940000162639
Northern American deer mouse	MODERN SPECIES	4	Bmpr2 (ENSPEMG00000022646) #7	Fam117b (ENSPEMG00000011700) #8	ENSPEMG00000024187 #9	Ica1l (ENSPEMG00000021278) #10	Wdr12 (ENSPEMG00000022189) #11	Carf (ENSPEMG00000020983) #12	ENSPEMG00000028509 #13	Nbeal1 (ENSPEMG00000029402) #14	Cyp20a1 (ENSPEMG00000023627) #15	Abi2 (ENSPEMG00000020443) #16	Raph1 (ENSPEMG00000022086) #17	Cd28 (ENSPEMG00000028537) #18	Ctla4 (ENSPEMG00000020722) #19	Icos (ENSPEMG00000015472) #20	Pard3b (ENSPEMG00000020745) #21	Nrp2 (ENSPEMG00000020944) #22	Ino80d (ENSPEMG00000020652) #23	Ndufs1 (ENSPEMG00000020453) #24	Eef1b2 (ENSPEMG00000016842) #25	Cmklr2 (ENSPEMG00000000909) #26	Zdbf2 (ENSPEMG00000029531) #27	Adam23 (ENSPEMG00000020455) #28	Gm39653 (ENSPEMG00000029994) #29	Dytn (ENSPEMG00000020630) #30	Mdh1b (ENSPEMG00000012142) #31	Fastkd2 (ENSPEMG00000010593) #32	ENSPEMG00000029845 #33	Klf7 (ENSPEMG00000028836) #34	Creb1 (ENSPEMG00000012416) #35	Mettl21a (ENSPEMG00000027520) #36	Ccnyl1 (ENSPEMG00000022762) #37
Prairie vole	MODERN SPECIES	354	Daw1 (ENSMOCG00000014056)	Sphkap (ENSMOCG00000010348)	Pid1 (ENSMOCG00000022904)	Dner (ENSMOCG00000020102)	Trip12 (ENSMOCG00000021899)	Fbxo36 (ENSMOCG00000015360)	Slc16a14 (ENSMOCG00000006969)	Nbeal1 (ENSMOCG00000015319) #14	Abi2 (ENSMOCG00000013762) #16	Raph1 (ENSMOCG00000016577) #17	Cd28 (ENSMOCG00000003240) #18	Ctla4 (ENSMOCG00000018484) #19	ENSMOCG00000017292	Icos (ENSMOCG00000008578) #20	Pard3b (ENSMOCG00000021107) #21	Nrp2 (ENSMOCG00000018160) #22	Ino80d (ENSMOCG00000022487) #23	Ndufs1 (ENSMOCG00000018918) #24	Eef1b2 (ENSMOCG00000004803) #25	Zdbf2 (ENSMOCG00000021962) #27	Adam23 (ENSMOCG00000012227) #28	ENSMOCG00000001238	Dytn (ENSMOCG00000015652) #30	Mdh1b (ENSMOCG00000001314) #31	Fastkd2 (ENSMOCG00000019859) #32	ENSMOCG00000008631	Klf7 (ENSMOCG00000009593) #34	Creb1 (ENSMOCG00000002192) #35	Mettl21a (ENSMOCG00000017410) #36	Ccnyl1 (ENSMOCG00000016018) #37	Fzd5 (ENSMOCG00000013581)
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37	ENSGT00940000162639
Chinese hamster chok1gshd	MODERN SPECIES	1	Nop58 (ENSCGRG00001017869)	ENSCGRG00001009737	Bmpr2 (ENSCGRG00001020694) #7	Fam117b (ENSCGRG00001020456) #8	Ica1l (ENSCGRG00001018928) #10	WDR12 (ENSCGRG00001016494) #11	Carf (ENSCGRG00001016848) #12	Nbeal1 (ENSCGRG00001018313) #14	Cyp20a1 (ENSCGRG00001018508) #15	Abi2 (ENSCGRG00001017572) #16	Raph1 (ENSCGRG00001019075) #17	Cd28 (ENSCGRG00001021553) #18	Ctla4 (ENSCGRG00001017244) #19	Icos (ENSCGRG00001016804) #20	Pard3b (ENSCGRG00001023180) #21	Nrp2 (ENSCGRG00001001140) #22	Ino80d (ENSCGRG00001020225) #23	Ndufs1 (ENSCGRG00001018185) #24	Eef1b2 (ENSCGRG00001017503) #25	Cmklr2 (ENSCGRG00001010463) #26	Zdbf2 (ENSCGRG00001018156) #27	Adam23 (ENSCGRG00001021362) #28	Gm39653 (ENSCGRG00001017288) #29	Dytn (ENSCGRG00001017611) #30	Mdh1b (ENSCGRG00001017642) #31	Fastkd2 (ENSCGRG00001020432) #32	Klf7 (ENSCGRG00001018794) #34	ENSCGRG00001018665	Creb1 (ENSCGRG00001018838) #35	Mettl21a (ENSCGRG00001017438) #36	Ccnyl1 (ENSCGRG00001017467) #37
Golden Hamster	MODERN SPECIES	640	Nop58 (ENSMAUG00000009734)	Bmpr2 (ENSMAUG00000009115) #7	Fam117b (ENSMAUG00000017770) #8	Ica1l (ENSMAUG00000013926) #10	Wdr12 (ENSMAUG00000001279) #11	Carf (ENSMAUG00000009693) #12	ENSMAUG00000007926 #14	ENSMAUG00000001805 #14	ENSMAUG00000007020 #15	Abi2 (ENSMAUG00000016724) #16	ENSMAUG00000008616 #17	Cd28 (ENSMAUG00000020132) #18	Ctla4 (ENSMAUG00000017208) #19	Icos (ENSMAUG00000019187) #20	Pard3b (ENSMAUG00000019516) #21	Nrp2 (ENSMAUG00000020662) #22	Ino80d (ENSMAUG00000012087) #23	ENSMAUG00000017015 #24	Eef1b2 (ENSMAUG00000011478) #25	Cmklr2 (ENSMAUG00000009931) #26	Zdbf2 (ENSMAUG00000017491) #27	Adam23 (ENSMAUG00000012410) #28	Dytn (ENSMAUG00000021422) #30	Mdh1b (ENSMAUG00000016431) #31	Fastkd2 (ENSMAUG00000009136) #32	Klf7 (ENSMAUG00000022037) #34	Creb1 (ENSMAUG00000018215) #35	Mettl21a (ENSMAUG00000020877) #36	Fzd5 (ENSMAUG00000022033)	Plekhm3 (ENSMAUG00000021638)	ENSMAUG00000022028
Murinae	ANCESTRAL SPECIES	9	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37	ENSGT00940000162639
Mus	ANCESTRAL SPECIES	5	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00860000135862	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00860000135862	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a.c #37
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089.l #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00860000135862	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a.c #37
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089.l #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00860000135862	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a.c #37
spretus	MODERN SPECIES		Sumo1 (MGP_SPRETEiJ_G0014987)	Nop58 (MGP_SPRETEiJ_G0014988)	Bmpr2 (MGP_SPRETEiJ_G0014989) #7	MGP_SPRETEiJ_G0014990 ##8	Ica1l (MGP_SPRETEiJ_G0014991) #10	Wdr12 (MGP_SPRETEiJ_G0014992) #11	Carf (MGP_SPRETEiJ_G0014993) #12	Nbeal1 (MGP_SPRETEiJ_G0014994) #14	Cyp20a1 (MGP_SPRETEiJ_G0014995) #15	Abi2 (MGP_SPRETEiJ_G0014996) #16	Raph1 (MGP_SPRETEiJ_G0014997) #17	Cd28 (MGP_SPRETEiJ_G0014998) #18	Ctla4 (MGP_SPRETEiJ_G0014999) #19	Icos (MGP_SPRETEiJ_G0015000) #20	Pard3b (MGP_SPRETEiJ_G0015001) #21	Nrp2 (MGP_SPRETEiJ_G0015002) #22	Ino80d (MGP_SPRETEiJ_G0015003) #23	Ndufs1 (MGP_SPRETEiJ_G0015004) #24	Eef1b2 (MGP_SPRETEiJ_G0015005) #25	Cmklr2 (MGP_SPRETEiJ_G0015006) #26	Zdbf2 (MGP_SPRETEiJ_G0015007) #27	Adam23 (MGP_SPRETEiJ_G0015008) #28	Dytn (MGP_SPRETEiJ_G0015009) #30	Mdh1b (MGP_SPRETEiJ_G0015010) #31	Fastkd2 (MGP_SPRETEiJ_G0015011) #32	MGP_SPRETEiJ_G0015012	Klf7 (MGP_SPRETEiJ_G0015013) #34	Creb1 (MGP_SPRETEiJ_G0015014) #35	Mettl21a (MGP_SPRETEiJ_G0015015) #36	Ccnyl1 (MGP_SPRETEiJ_G0015016) #37	Fzd5 (MGP_SPRETEiJ_G0015017)
Steppe mouse	MODERN SPECIES	44	Fam117b (ENSMSIG00000010018) #8	Ica1l (ENSMSIG00000010027) #10	Wdr12 (ENSMSIG00000010103) #11	Carf (ENSMSIG00000010210) #12	ENSMSIG00000010287	Nbeal1 (ENSMSIG00000010304) #14	Cyp20a1 (ENSMSIG00000010618) #15	ENSMSIG00000010702 #16	Raph1 (ENSMSIG00000010756) #17	Cd28 (ENSMSIG00000011356) #18	ENSMSIG00000011370	Ctla4 (ENSMSIG00000011388) #19	Icos (ENSMSIG00000011424) #20	Pard3b (ENSMSIG00000011469) #21	ENSMSIG00000011764	Nrp2 (ENSMSIG00000011775) #22	Ino80d (ENSMSIG00000012604) #23	Ndufs1 (ENSMSIG00000012674) #24	Eef1b2 (ENSMSIG00000012804) #25	Cmklr2 (ENSMSIG00000012880) #26	Zdbf2 (ENSMSIG00000012889) #27	ENSMSIG00000012937	Adam23 (ENSMSIG00000012957) #28	ENSMSIG00000013264	Gm39653 (ENSMSIG00000013270) #29	Dytn (ENSMSIG00000013289) #30
Mouse	MODERN SPECIES		Sumo1 (ENSMUSG00000026021)	Nop58 (ENSMUSG00000026020)	Bmpr2 (ENSMUSG00000067336) #7	Fam117b (ENSMUSG00000041040) #8	Ica1l (ENSMUSG00000026018) #10	Wdr12 (ENSMUSG00000026019) #11	Carf (ENSMUSG00000026017) #12	Nbeal1 (ENSMUSG00000073664) #14	Cyp20a1 (ENSMUSG00000049439) #15	Abi2 (ENSMUSG00000026782) #16	Raph1 (ENSMUSG00000026014) #17	Cd28 (ENSMUSG00000026012) #18	Ctla4 (ENSMUSG00000026011) #19	Icos (ENSMUSG00000026009) #20	Pard3b (ENSMUSG00000052062) #21	Nrp2 (ENSMUSG00000025969) #22	Ino80d (ENSMUSG00000040865) #23	Ndufs1 (ENSMUSG00000025968) #24	Eef1b2 (ENSMUSG00000025967) #25	Cmklr2 (ENSMUSG00000046856) #26	Zdbf2 (ENSMUSG00000027520) #27	Adam23 (ENSMUSG00000025964) #28	Gm39653 (ENSMUSG00000115378) #29	Dytn (ENSMUSG00000069085) #30	Mdh1b (ENSMUSG00000025963) #31	Fastkd2 (ENSMUSG00000025962) #32	Klf7 (ENSMUSG00000025959) #34	Creb1 (ENSMUSG00000025958) #35	Mettl21a (ENSMUSG00000025956) #36	Ccnyl1 (ENSMUSG00000070871) #37	Fzd5 (ENSMUSG00000045005)
Ryukyu mouse	MODERN SPECIES		Sumo1 (MGP_CAROLIEiJ_G0014180)	Nop58 (MGP_CAROLIEiJ_G0014181)	Bmpr2 (MGP_CAROLIEiJ_G0014182) #7	Fam117b (MGP_CAROLIEiJ_G0014183) #8	MGP_CAROLIEiJ_G0014184 #10	MGP_CAROLIEiJ_G0014185	Carf (MGP_CAROLIEiJ_G0014186) #12	Nbeal1 (MGP_CAROLIEiJ_G0014187) #14	Cyp20a1 (MGP_CAROLIEiJ_G0014188) #15	Abi2 (MGP_CAROLIEiJ_G0014189) #16	Raph1 (MGP_CAROLIEiJ_G0014190) #17	Cd28 (MGP_CAROLIEiJ_G0014191) #18	Ctla4 (MGP_CAROLIEiJ_G0014192) #19	Icos (MGP_CAROLIEiJ_G0014193) #20	Pard3b (MGP_CAROLIEiJ_G0014194) #21	Nrp2 (MGP_CAROLIEiJ_G0014195) #22	Ino80d (MGP_CAROLIEiJ_G0014196) #23	Ndufs1 (MGP_CAROLIEiJ_G0014197) #24	Eef1b2 (MGP_CAROLIEiJ_G0014198) #25	Cmklr2 (MGP_CAROLIEiJ_G0014199) #26	Zdbf2 (MGP_CAROLIEiJ_G0014200) #27	Adam23 (MGP_CAROLIEiJ_G0014201) #28	Dytn (MGP_CAROLIEiJ_G0014202) #30	Mdh1b (MGP_CAROLIEiJ_G0014203) #31	Fastkd2 (MGP_CAROLIEiJ_G0014204) #32	MGP_CAROLIEiJ_G0014205	Klf7 (MGP_CAROLIEiJ_G0014206) #34	Creb1 (MGP_CAROLIEiJ_G0014207) #35	Mettl21a (MGP_CAROLIEiJ_G0014208) #36	Ccnyl1 (MGP_CAROLIEiJ_G0014209) #37	Fzd5 (MGP_CAROLIEiJ_G0014210)
Shrew mouse	MODERN SPECIES	18	MGP_PahariEiJ_G0027418	Nop58 (MGP_PahariEiJ_G0027419)	Bmpr2 (MGP_PahariEiJ_G0027420) #7	Fam117b (MGP_PahariEiJ_G0027421) #8	MGP_PahariEiJ_G0027422 #10	MGP_PahariEiJ_G0027423 #11	Carf (MGP_PahariEiJ_G0027424) #12	MGP_PahariEiJ_G0027425 #14	Cyp20a1 (MGP_PahariEiJ_G0027426) #15	Abi2 (MGP_PahariEiJ_G0027427) #16	Raph1 (MGP_PahariEiJ_G0027428) #17	Cd28 (MGP_PahariEiJ_G0027429) #18	Ctla4 (MGP_PahariEiJ_G0027430) #19	MGP_PahariEiJ_G0027431 #20	Pard3b (MGP_PahariEiJ_G0027432) #21	Nrp2 (MGP_PahariEiJ_G0027433) #22	Ino80d (MGP_PahariEiJ_G0027434) #23	MGP_PahariEiJ_G0027435 #24	Eef1b2 (MGP_PahariEiJ_G0027436) #25	Cmklr2 (MGP_PahariEiJ_G0027437) #26	Zdbf2 (MGP_PahariEiJ_G0027438) #27	Adam23 (MGP_PahariEiJ_G0027439) #28	Dytn (MGP_PahariEiJ_G0027440) #30	Mdh1b (MGP_PahariEiJ_G0027441) #31	Fastkd2 (MGP_PahariEiJ_G0027442) #32	MGP_PahariEiJ_G0027443	Klf7 (MGP_PahariEiJ_G0027444) #34	Creb1 (MGP_PahariEiJ_G0027445) #35	Mettl21a (MGP_PahariEiJ_G0027446) #36	Ccnyl1 (MGP_PahariEiJ_G0027447) #37	Fzd5 (MGP_PahariEiJ_G0027448)
Rat	MODERN SPECIES	19	Bmpr2 (ENSRNOG00000022196) #7	ENSRNOG00000066953	LOC301444 (ENSRNOG00000019107)	Fam117b (ENSRNOG00000022066) #8	Ica1l (ENSRNOG00000017258) #10	Wdr12 (ENSRNOG00000017340) #11	Carf (ENSRNOG00000017491) #12	Nbeal1 (ENSRNOG00000021525) #14	Cyp20a1 (ENSRNOG00000017631) #15	Abi2 (ENSRNOG00000017707) #16	Raph1 (ENSRNOG00000014722) #17	Cd28 (ENSRNOG00000010283) #18	Ctla4 (ENSRNOG00000054129) #19	Icos (ENSRNOG00000046196) #20	Pard3b (ENSRNOG00000024345) #21	Nrp2 (ENSRNOG00000031232) #22	Rpl37-ps5 (ENSRNOG00000033803)	Ino80d (ENSRNOG00000024272) #23	Ndufs1 (ENSRNOG00000011849) #24	Eef1b2 (ENSRNOG00000024186) #25	Cmklr2 (ENSRNOG00000045532) #26	Zdbf2 (ENSRNOG00000024114) #27	Adam23 (ENSRNOG00000012424) #28	Fam237a (ENSRNOG00000054699) #29	Dytn (ENSRNOG00000042181) #30	Mdh1b (ENSRNOG00000012891) #31	ENSRNOG00000063009	Fastkd2 (ENSRNOG00000023923) #32	ENSRNOG00000063607	Klf7 (ENSRNOG00000046242) #34	LOC103690545 (ENSRNOG00000064370)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1322							Nbeal1 (ENSNGAG00000020072) #14	Cyp20a1 (ENSNGAG00000020232) #15	Abi2 (ENSNGAG00000012110) #16	ENSNGAG00000001490 #17	Cd28 (ENSNGAG00000015761) #18	Ctla4 (ENSNGAG00000019017) #19	ENSNGAG00000010975	Icos (ENSNGAG00000015325) #20	Pard3b (ENSNGAG00000019309) #21	Nrp2 (ENSNGAG00000014175) #22	Ino80d (ENSNGAG00000007370) #23	Ndufs1 (ENSNGAG00000016531) #24	Eef1b2 (ENSNGAG00000020801) #25	Cmklr2 (ENSNGAG00000014936) #26	Zdbf2 (ENSNGAG00000010826) #27	Adam23 (ENSNGAG00000014933) #28	Mdh1b (ENSNGAG00000000139) #31	Fastkd2 (ENSNGAG00000001279) #32	Klf7 (ENSNGAG00000016561) #34	Creb1 (ENSNGAG00000018967) #35	Mettl21a (ENSNGAG00000013752) #36	ENSNGAG00000014167	Ccnyl1 (ENSNGAG00000004870) #37	Fzd5 (ENSNGAG00000014954)	Plekhm3 (ENSNGAG00000007962)
Lesser Egyptian jerboa	MODERN SPECIES	52	ENSJJAG00000022745	Nop58 (ENSJJAG00000018213)	Bmpr2 (ENSJJAG00000015151) #7	Fam117b (ENSJJAG00000019496) #8	Ica1l (ENSJJAG00000022732) #10	ENSJJAG00000000724 #11	Carf (ENSJJAG00000014072) #12	Nbeal1 (ENSJJAG00000023210) #14	Cyp20a1 (ENSJJAG00000007155) #15	Abi2 (ENSJJAG00000006918) #16	ENSJJAG00000023840 #17	Cd28 (ENSJJAG00000001227) #18	Ctla4 (ENSJJAG00000013112) #19	Icos (ENSJJAG00000007794) #20	Pard3b (ENSJJAG00000015271) #21	Nrp2 (ENSJJAG00000016788) #22	Ino80d (ENSJJAG00000018074) #23	Ndufs1 (ENSJJAG00000013916) #24	Eef1b2 (ENSJJAG00000004915) #25	Adam23 (ENSJJAG00000016078) #28	Dytn (ENSJJAG00000016868) #30	Mdh1b (ENSJJAG00000010713) #31	Fastkd2 (ENSJJAG00000000986) #32	ENSJJAG00000021742	Klf7 (ENSJJAG00000011480) #34	Creb1 (ENSJJAG00000013846) #35	ENSJJAG00000023618 #36	Ccnyl1 (ENSJJAG00000024111) #37	Fzd5 (ENSJJAG00000004014)	Plekhm3 (ENSJJAG00000012116)	ENSJJAG00000021625
Kangaroo rat	MODERN SPECIES	320	Bmpr2 (ENSDORG00000009209) #7	ENSDORG00000015288 #8	Ica1l (ENSDORG00000015292) #10	Wdr12 (ENSDORG00000015294) #11	Carf (ENSDORG00000006614) #12	Nbeal1 (ENSDORG00000015714) #14	Cyp20a1 (ENSDORG00000015715) #15	ENSDORG00000028647	Abi2 (ENSDORG00000028252) #16	ENSDORG00000007525 #17	Cd28 (ENSDORG00000013428) #18	Ctla4 (ENSDORG00000008556) #19	Icos (ENSDORG00000010237) #20	ENSDORG00000029364	Pard3b (ENSDORG00000014139) #21	ENSDORG00000029450 #22	Ino80d (ENSDORG00000027999) #23	ENSDORG00000025350 #24	ENSDORG00000023550 #24	Cmklr2 (ENSDORG00000013107) #26	Adam23 (ENSDORG00000015422) #28	Dytn (ENSDORG00000028814) #30	Mdh1b (ENSDORG00000011290) #31	Fastkd2 (ENSDORG00000011295) #32	Klf7 (ENSDORG00000009634) #34	Creb1 (ENSDORG00000012535) #35	Mettl21a (ENSDORG00000012543) #36	Ccnyl1 (ENSDORG00000009933) ##37	Fzd5 (ENSDORG00000027490)	ENSDORG00000023690	Plekhm3 (ENSDORG00000029697)
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.b ##37
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.b ##37
Marmotini	ANCESTRAL SPECIES	2	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.g #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.b ##37
Marmotini_b	ANCESTRAL SPECIES	103	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.g #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.b ##37
Squirrel	MODERN SPECIES	231										ABI2 (ENSSTOG00000015888) #16	RAPH1 (ENSSTOG00000028594) #17	CD28 (ENSSTOG00000026213) #18	CTLA4 (ENSSTOG00000020540) #19	ICOS (ENSSTOG00000013542) #20	PARD3B (ENSSTOG00000010207) #21	NRP2 (ENSSTOG00000010229) #22	INO80D (ENSSTOG00000028419) #23	NDUFS1 (ENSSTOG00000010255) #24	EEF1B2 (ENSSTOG00000005437) #25	CMKLR2 (ENSSTOG00000005452) #26	ZDBF2 (ENSSTOG00000001663) #27	ADAM23 (ENSSTOG00000024094) #28	DYTN (ENSSTOG00000019822) #30	MDH1B (ENSSTOG00000003194) #31	FASTKD2 (ENSSTOG00000022821) #32	CPO (ENSSTOG00000013351)	KLF7 (ENSSTOG00000011069) #34	CREB1 (ENSSTOG00000016482) #35	METTL21A (ENSSTOG00000016483) #36	ENSSTOG00000021511	CCNYL1 (ENSSTOG00000016484) ##37
Arctic ground squirrel	MODERN SPECIES	141								CYP20A1 (ENSUPAG00010007092) #15	ABI2 (ENSUPAG00010007107) #16	RAPH1 (ENSUPAG00010007232) #17	ENSUPAG00010007347	CD28 (ENSUPAG00010007360) #18	CTLA4 (ENSUPAG00010007371) #19	ICOS (ENSUPAG00010007386) #20	PARD3B (ENSUPAG00010007426) #21	NRP2 (ENSUPAG00010007567) #22	INO80D (ENSUPAG00010007624) #23	NDUFS1 (ENSUPAG00010007661) #24	EEF1B2 (ENSUPAG00010007678) #25	CMKLR2 (ENSUPAG00010007707) #26	ZDBF2 (ENSUPAG00010007725) #27	ADAM23 (ENSUPAG00010007731) #28	FAM237A (ENSUPAG00010007856) #29	DYTN (ENSUPAG00010007862) #30	MDH1B (ENSUPAG00010007886) #31	FASTKD2 (ENSUPAG00010007916) #32	CPO (ENSUPAG00010007941)	KLF7 (ENSUPAG00010007967) #34	CREB1 (ENSUPAG00010007984) #35	METTL21A (ENSUPAG00010008009) #36	CCNYL1 (ENSUPAG00010008021) ##37
Alpin marmot	MODERN SPECIES	8	ENSMMMG00000013017	ENSMMMG00000013051 #8	ENSMMMG00000013060 #8	ICA1L (ENSMMMG00000013064) #10	WDR12 (ENSMMMG00000013110) #11	CARF (ENSMMMG00000013161) #12	NBEAL1 (ENSMMMG00000013229) #14	CYP20A1 (ENSMMMG00000013312) #15	ABI2 (ENSMMMG00000013329) #16	ENSMMMG00000013568 #17	CD28 (ENSMMMG00000013599) #18	CTLA4 (ENSMMMG00000013609) #19	ICOS (ENSMMMG00000013624) #20	PARD3B (ENSMMMG00000013680) #21	ENSMMMG00000013911	NRP2 (ENSMMMG00000013924) #22	INO80D (ENSMMMG00000014555) #23	NDUFS1 (ENSMMMG00000014566) #24	ENSMMMG00000014596 #25	CMKLR2 (ENSMMMG00000014632) #26	ZDBF2 (ENSMMMG00000014650) #27	ADAM23 (ENSMMMG00000014678) #28	FAM237A (ENSMMMG00000014819) #29	DYTN (ENSMMMG00000014828) #30	ENSMMMG00000014844	MDH1B (ENSMMMG00000014852) #31	FASTKD2 (ENSMMMG00000014857) #32	CPO (ENSMMMG00000014874)	KLF7 (ENSMMMG00000014897) #34	CREB1 (ENSMMMG00000014914) #35	METTL21A (ENSMMMG00000015010) #36
Eurasian red squirrel	MODERN SPECIES	12	ENSSVLG00005000362	BMPR2 (ENSSVLG00005000484) #7	ENSSVLG00005000534 #8	ENSSVLG00005000554	ENSSVLG00005000579 #10	WDR12 (ENSSVLG00005000598) #11	ENSSVLG00005000686 #12	ENSSVLG00005000784	NBEAL1 (ENSSVLG00005000853) #14	CYP20A1 (ENSSVLG00005000970) #15	ABI2 (ENSSVLG00005001071) #16	CD28 (ENSSVLG00005001473) #18	CTLA4 (ENSSVLG00005001529) #19	ICOS (ENSSVLG00005001570) #20	PARD3B (ENSSVLG00005001789) #21	NRP2 (ENSSVLG00005002141) #22	INO80D (ENSSVLG00005002283) #23	ENSSVLG00005002396 #24	ENSSVLG00005002606 #25	CMKLR2 (ENSSVLG00005002631) #26	ENSSVLG00005002653 #27	ADAM23 (ENSSVLG00005002721) #28	FAM237A (ENSSVLG00005002854) #29	DYTN (ENSSVLG00005002873) #30	MDH1B (ENSSVLG00005002924) #31	FASTKD2 (ENSSVLG00005002985) #32	CPO (ENSSVLG00005003015)	KLF7 (ENSSVLG00005003049) #34	CREB1 (ENSSVLG00005003093) #35	METTL21A (ENSSVLG00005003134) #36	ENSSVLG00005003181 ##37
Hystricomorpha	ANCESTRAL SPECIES	28	ENSGT00940000154319.v	ENSGT00940000153534.A.t.a	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37	ENSGT00940000162639
Naked mole-rat female	MODERN SPECIES	17	ENSHGLG00000004722	ENSHGLG00000020889	CARF (ENSHGLG00000007326) #12	ENSHGLG00000037622	NBEAL1 (ENSHGLG00000004471) #14	CYP20A1 (ENSHGLG00000050312) #15	ABI2 (ENSHGLG00000007481) #16	ENSHGLG00000005031 #17	CD28 (ENSHGLG00000037192) #18	CTLA4 (ENSHGLG00000009115) #19	ICOS (ENSHGLG00000008777) #20	ENSHGLG00000043313	ENSHGLG00000016877	ENSHGLG00000048100	PARD3B (ENSHGLG00000004982) #21	NRP2 (ENSHGLG00000010562) #22	ENSHGLG00000049876	INO80D (ENSHGLG00000018537) #23	NDUFS1 (ENSHGLG00000015179) #24	EEF1B2 (ENSHGLG00000015147) #25	ENSHGLG00000045433	CMKLR2 (ENSHGLG00000046982) #26	ENSHGLG00000044712 #27	ADAM23 (ENSHGLG00000006393) #28	FAM237A (ENSHGLG00000030355) #29	ENSHGLG00000005368	MDH1B (ENSHGLG00000004936) #31	FASTKD2 (ENSHGLG00000004761) #32	ENSHGLG00000045814	KLF7 (ENSHGLG00000044157) #34	ENSHGLG00000017319
Hystricomorpha_a	ANCESTRAL SPECIES	67	ENSGT00860000133854	ENSGT00940000154319.v	ENSGT00940000153534.A.t.a	ENSGT00940000156449 #7	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37	ENSGT00940000162639	ENSGT00940000159743	ENSGT00940000159232.h.b
Guinea pig	MODERN SPECIES	13	SUMO1 (ENSCPOG00000039864)	NOP58 (ENSCPOG00000030510)	BMPR2 (ENSCPOG00000009586) #7	ICA1L (ENSCPOG00000009349) #10	WDR12 (ENSCPOG00000008824) #11	CARF (ENSCPOG00000008827) #12	NBEAL1 (ENSCPOG00000008009) #14	CYP20A1 (ENSCPOG00000009758) #15	ABI2 (ENSCPOG00000007562) #16	RAPH1 (ENSCPOG00000020239) #17	CD28 (ENSCPOG00000035938) #18	CTLA4 (ENSCPOG00000019534) #19	ICOS (ENSCPOG00000030931) #20	ENSCPOG00000030358	PARD3B (ENSCPOG00000004380) #21	NRP2 (ENSCPOG00000004390) #22	ENSCPOG00000010964 #23	NDUFS1 (ENSCPOG00000005555) #24	EEF1B2 (ENSCPOG00000014496) #25	ADAM23 (ENSCPOG00000005871) #28	MDH1B (ENSCPOG00000005608) #31	FASTKD2 (ENSCPOG00000005624) #32	KLF7 (ENSCPOG00000009080) #34	CREB1 (ENSCPOG00000010778) #35	METTL21A (ENSCPOG00000034803) #36	ENSCPOG00000035156 ##37	FZD5 (ENSCPOG00000038146)	PLEKHM3 (ENSCPOG00000004119)	CRYGC (ENSCPOG00000000186)	ENSCPOG00000022025	CRYGA (ENSCPOG00000015047)
Hystricomorpha_b	ANCESTRAL SPECIES	52	ENSGT00860000133854	ENSGT00940000154319.v	ENSGT00940000153534.A.t.a	ENSGT00940000156449 #7	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37	ENSGT00940000162639	ENSGT00940000159743	ENSGT00940000159232.h.b
Long-tailed chinchilla	MODERN SPECIES	164	ICA1L (ENSCLAG00000005015) #10	WDR12 (ENSCLAG00000004491) #11	CARF (ENSCLAG00000007915) #12	ENSCLAG00000007700	ENSCLAG00000006700	NBEAL1 (ENSCLAG00000005102) #14	CYP20A1 (ENSCLAG00000004163) #15	ENSCLAG00000006025	ENSCLAG00000004760	ABI2 (ENSCLAG00000004021) #16	ENSCLAG00000003175 #17	CD28 (ENSCLAG00000004670) #18	CTLA4 (ENSCLAG00000004042) #19	ICOS (ENSCLAG00000003964) #20	PARD3B (ENSCLAG00000010240) #21	NRP2 (ENSCLAG00000009120) #22	INO80D (ENSCLAG00000006191) #23	NDUFS1 (ENSCLAG00000009634) #24	EEF1B2 (ENSCLAG00000009181) #25	CMKLR2 (ENSCLAG00000008973) #26	ENSCLAG00000008490	ATXN3L (ENSCLAG00000005825)	ADAM23 (ENSCLAG00000004674) #28	DYTN (ENSCLAG00000003705) #30	MDH1B (ENSCLAG00000003385) #31	FASTKD2 (ENSCLAG00000007036) #32	KLF7 (ENSCLAG00000006083) #34	CREB1 (ENSCLAG00000005853) #35	METTL21A (ENSCLAG00000005572) #36	ENSCLAG00000005432	ENSCLAG00000004502 ##37
Degu	MODERN SPECIES	57	ENSODEG00000009897	ENSODEG00000011455	WDR12 (ENSODEG00000011602) #11	CARF (ENSODEG00000011312) #12	NBEAL1 (ENSODEG00000010440) #14	CYP20A1 (ENSODEG00000010253) #15	ENSODEG00000009779	ABI2 (ENSODEG00000009457) #16	ENSODEG00000013477 #17	CTLA4 (ENSODEG00000009327) #19	ENSODEG00000010295	ICOS (ENSODEG00000011327) #20	ENSODEG00000009131	ENSODEG00000010021	PARD3B (ENSODEG00000012523) #21	ENSODEG00000010455 #22	INO80D (ENSODEG00000009769) #23	ENSODEG00000019630	ENSODEG00000008842 #24	ENSODEG00000009030 #24	ENSODEG00000008974 #24	ENSODEG00000010229 #25	ENSODEG00000019757	ADAM23 (ENSODEG00000011161) #28	DYTN (ENSODEG00000009029) #30	MDH1B (ENSODEG00000009494) #31	FASTKD2 (ENSODEG00000009880) #32	KLF7 (ENSODEG00000010345) #34	ENSODEG00000009956	ENSODEG00000009302	CREB1 (ENSODEG00000010264) #35
Lagomorpha	ANCESTRAL SPECIES	13	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041.ob #14	ENSGT00940000155041.nb #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37	ENSGT00940000162639
Rabbit	MODERN SPECIES	18	ENSOCUG00000006347 #8	ENSOCUG00000030693 #8	ENSOCUG00000010497 #10	WDR12 (ENSOCUG00000002961) #11	CARF (ENSOCUG00000005335) #12	ENSOCUG00000027134	NBEAL1 (ENSOCUG00000008716) #14	CYP20A1 (ENSOCUG00000008054) #15	ENSOCUG00000008062 #16	ENSOCUG00000016722 #17	CD28 (ENSOCUG00000016134) #18	ENSOCUG00000030918	CTLA4 (ENSOCUG00000017274) #19	ICOS (ENSOCUG00000001858) #20	PARD3B (ENSOCUG00000007959) #21	NRP2 (ENSOCUG00000007978) #22	INO80D (ENSOCUG00000014786) #23	ENSOCUG00000009848 #25	NDUFS1 (ENSOCUG00000012368) #24	CMKLR2 (ENSOCUG00000012384) #26	ENSOCUG00000024602	ENSOCUG00000009421 #27	ADAM23 (ENSOCUG00000010659) #28	DYTN (ENSOCUG00000021490) #30	MDH1B (ENSOCUG00000010506) #31	ENSOCUG00000010515 #32	CPO (ENSOCUG00000009806)	KLF7 (ENSOCUG00000009813) #34	ENSOCUG00000027419	CREB1 (ENSOCUG00000005427) #35	ENSOCUG00000005431 #36
Pika	MODERN SPECIES	3694														PARD3B (ENSOPRG00000010812) #21	ENSOPRG00000010848	NRP2 (ENSOPRG00000010856) #22
Tree shrew	MODERN SPECIES	653														PARD3B (ENSTBEG00000002494) #21	ENSTBEG00000004230	NRP2 (ENSTBEG00000004603) #22
Primates	ANCESTRAL SPECIES	13	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.b ##37
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.b ##37
Tarsier	MODERN SPECIES	4878																NRP2 (ENSTSYG00000033080) #22	INO80D (ENSTSYG00000030622) #23	NDUFS1 (ENSTSYG00000014545) #24	EEF1B2 (ENSTSYG00000014573) #25	ZDBF2 (ENSTSYG00000035582) #27
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00940000153534.A	ENSGT00390000008128.c.a.a	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.b ##37
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00390000008128.c.a.a	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00940000153052.c.b.a.a.a.a.a.a.a	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00390000008128.c.a.a	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.a.b ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35
Hominidae	ANCESTRAL SPECIES	17	ENSGT00390000008128.c.a.a	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.a.b ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00950000183046.a.a #8	ENSGT00610000087446	ENSGT00390000015889.j	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.a.b.a.a ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00950000183046.a.a #8	ENSGT00610000087446	ENSGT00390000015889.j	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.a.b.a.a ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35
Pan	ANCESTRAL SPECIES	12	ENSGT00950000183046.a.a #8	ENSGT00610000087446	ENSGT00390000015889.j	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.a.b.a.a ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35
Chimpanzee	MODERN SPECIES	15	ENSPTRG00000040928	ENSPTRG00000044806	ICA1L (ENSPTRG00000012822) #10	WDR12 (ENSPTRG00000012823) #11	CARF (ENSPTRG00000012824) #12	NBEAL1 (ENSPTRG00000012828) #14	ENSPTRG00000012829 #15	ABI2 (ENSPTRG00000012830) #16	RAPH1 (ENSPTRG00000012831) #17	ENSPTRG00000043246	CD28 (ENSPTRG00000012833) #18	ENSPTRG00000051964	CTLA4 (ENSPTRG00000044793) #19	ICOS (ENSPTRG00000012837) #20	PARD3B (ENSPTRG00000012838) #21	NRP2 (ENSPTRG00000012839) #22	INO80D (ENSPTRG00000012841) #23	NDUFS1 (ENSPTRG00000012842) #24	EEF1B2 (ENSPTRG00000049619) ##25	CMKLR2 (ENSPTRG00000012844) #26	ENSPTRG00000052002	ZDBF2 (ENSPTRG00000029052) #27	ADAM23 (ENSPTRG00000012846) #28	FAM237A (ENSPTRG00000045763) #29	DYTN (ENSPTRG00000042355) #30	MDH1B (ENSPTRG00000012847) #31	FASTKD2 (ENSPTRG00000012848) #32	CPO (ENSPTRG00000012849)	KLF7 (ENSPTRG00000012850) #34	CREB1 (ENSPTRG00000043959) #35	METTL21A (ENSPTRG00000012852) #36
Bonobo	MODERN SPECIES	15	BMPR2 (ENSPPAG00000017269) #7	FAM117B (ENSPPAG00000041596) #8	ENSPPAG00000027947	ICA1L (ENSPPAG00000037623) #10	ENSPPAG00000033697 #11	CARF (ENSPPAG00000042960) #12	NBEAL1 (ENSPPAG00000040934) #14	CYP20A1 (ENSPPAG00000040724) #15	ABI2 (ENSPPAG00000030582) #16	RAPH1 (ENSPPAG00000024317) #17	ENSPPAG00000032675	CD28 (ENSPPAG00000034998) #18	CTLA4 (ENSPPAG00000041661) #19	ICOS (ENSPPAG00000037117) #20	PARD3B (ENSPPAG00000033958) #21	NRP2 (ENSPPAG00000041062) #22	ENSPPAG00000040957	INO80D (ENSPPAG00000017120) #23	NDUFS1 (ENSPPAG00000032284) #24	ENSPPAG00000033754 ##25	ENSPPAG00000031391	ZDBF2 (ENSPPAG00000038901) #27	ADAM23 (ENSPPAG00000030147) #28	FAM237A (ENSPPAG00000028915) #29	DYTN (ENSPPAG00000008787) #30	ENSPPAG00000031338 #31	FASTKD2 (ENSPPAG00000021300) #32	CPO (ENSPPAG00000033230)	KLF7 (ENSPPAG00000035305) #34	CREB1 (ENSPPAG00000042817) #35	METTL21A (ENSPPAG00000041715) #36
Human	MODERN SPECIES	11	NOP58 (ENSG00000055044)	BMPR2 (ENSG00000204217) #7	ENSG00000289490	FAM117B (ENSG00000138439) #8	ICA1L (ENSG00000163596) #10	WDR12 (ENSG00000138442) #11	CARF (ENSG00000138380) #12	NBEAL1 (ENSG00000144426) #14	CYP20A1 (ENSG00000119004) #15	ABI2 (ENSG00000138443) #16	RAPH1 (ENSG00000173166) #17	CD28 (ENSG00000178562) #18	CTLA4 (ENSG00000163599) #19	ICOS (ENSG00000163600) #20	PARD3B (ENSG00000116117) #21	NRP2 (ENSG00000118257) #22	INO80D (ENSG00000114933) #23	NDUFS1 (ENSG00000023228) #24	EEF1B2 (ENSG00000114942) ##25	CMKLR2 (ENSG00000183671) #26	ZDBF2 (ENSG00000204186) #27	ADAM23 (ENSG00000114948) #28	FAM237A (ENSG00000235118) #29	DYTN (ENSG00000232125) #30	MDH1B (ENSG00000138400) #31	FASTKD2 (ENSG00000118246) #32	CPO (ENSG00000144410)	KLF7 (ENSG00000118263) #34	CREB1 (ENSG00000118260) #35	METTL21A (ENSG00000144401) #36	CCNYL1 (ENSG00000163249) ##37
Gorilla	MODERN SPECIES	15	ENSGGOG00000014813 #8	ENSGGOG00000016194	ICA1L (ENSGGOG00000017038) #10	WDR12 (ENSGGOG00000026073) #11	ENSGGOG00000036442 #12	NBEAL1 (ENSGGOG00000015453) #14	CYP20A1 (ENSGGOG00000007044) #15	ABI2 (ENSGGOG00000016384) #16	RAPH1 (ENSGGOG00000016399) #17	ENSGGOG00000023735	CD28 (ENSGGOG00000041735) #18	ENSGGOG00000039900	CTLA4 (ENSGGOG00000007961) #19	ICOS (ENSGGOG00000014097) #20	PARD3B (ENSGGOG00000034911) #21	NRP2 (ENSGGOG00000009537) #22	INO80D (ENSGGOG00000015570) #23	NDUFS1 (ENSGGOG00000001513) #24	EEF1B2 (ENSGGOG00000007002) ##25	ENSGGOG00000042195	ZDBF2 (ENSGGOG00000023142) #27	ENSGGOG00000024971	ADAM23 (ENSGGOG00000012509) #28	FAM237A (ENSGGOG00000037017) #29	DYTN (ENSGGOG00000027242) #30	MDH1B (ENSGGOG00000002059) #31	FASTKD2 (ENSGGOG00000002062) #32	CPO (ENSGGOG00000016053)	KLF7 (ENSGGOG00000009338) #34	CREB1 (ENSGGOG00000024394) #35	METTL21A (ENSGGOG00000015815) #36
Orangutan	MODERN SPECIES	15	NOP58 (ENSPPYG00000013084)	BMPR2 (ENSPPYG00000013085) #7	FAM117B (ENSPPYG00000037197) #8	ENSPPYG00000034941	ICA1L (ENSPPYG00000013088) #10	WDR12 (ENSPPYG00000040830) #11	CARF (ENSPPYG00000013090) #12	NBEAL1 (ENSPPYG00000013092) #14	CYP20A1 (ENSPPYG00000013093) #15	ABI2 (ENSPPYG00000013094) #16	RAPH1 (ENSPPYG00000013096) #17	CD28 (ENSPPYG00000039922) #18	CTLA4 (ENSPPYG00000036623) #19	ICOS (ENSPPYG00000013100) #20	PARD3B (ENSPPYG00000013101) #21	NRP2 (ENSPPYG00000013102) #22	INO80D (ENSPPYG00000013104) #23	ENSPPYG00000038957	NDUFS1 (ENSPPYG00000013106) #24	EEF1B2 (ENSPPYG00000013107) ##25	CMKLR2 (ENSPPYG00000013108) #26	ZDBF2 (ENSPPYG00000013109) #27	ADAM23 (ENSPPYG00000013110) #28	FAM237A (ENSPPYG00000036282) #29	DYTN (ENSPPYG00000031262) #30	MDH1B (ENSPPYG00000013111) #31	FASTKD2 (ENSPPYG00000013112) #32	CPO (ENSPPYG00000013113)	KLF7 (ENSPPYG00000013114) #34	CREB1 (ENSPPYG00000013115) #35	METTL21A (ENSPPYG00000013116) #36
Gibbon	MODERN SPECIES	14	WDR12 (ENSNLEG00000007018) #11	CARF (ENSNLEG00000007026) #12	NBEAL1 (ENSNLEG00000007032) #14	ENSNLEG00000029450	CYP20A1 (ENSNLEG00000035097) #15	ENSNLEG00000007043 #16	RAPH1 (ENSNLEG00000007048) #17	ENSNLEG00000030127	ENSNLEG00000035533	ENSNLEG00000029125	CD28 (ENSNLEG00000007057) #18	CTLA4 (ENSNLEG00000007059) #19	ICOS (ENSNLEG00000007065) #20	ENSNLEG00000007066 #21	ENSNLEG00000036209 #21	NRP2 (ENSNLEG00000007071) #22	INO80D (ENSNLEG00000032256) #23	NDUFS1 (ENSNLEG00000007090) #24	ENSNLEG00000007098 ##25	ENSNLEG00000033131	ZDBF2 (ENSNLEG00000007100) #27	ADAM23 (ENSNLEG00000007102) #28	FAM237A (ENSNLEG00000007112) #29	DYTN (ENSNLEG00000007113) #30	MDH1B (ENSNLEG00000007114) #31	FASTKD2 (ENSNLEG00000007116) #32	CPO (ENSNLEG00000007121)	KLF7 (ENSNLEG00000035258) #34	CREB1 (ENSNLEG00000007124) #35	METTL21A (ENSNLEG00000007129) #36	CCNYL1 (ENSNLEG00000007131) ##37
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00390000008128.c.a.a	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00950000182810.A.a.a.lb.d	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35
Macaca	ANCESTRAL SPECIES	15	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552.b #17	ENSGT00530000063873.A #18	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a.b	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00950000182810.A.a.a.lb.d	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35
Pig-tailed macaque	MODERN SPECIES	409	FAM117B (ENSMNEG00000033073) #8	ICA1L (ENSMNEG00000039428) #10	ENSMNEG00000027411 #11	CARF (ENSMNEG00000033105) #12	NBEAL1 (ENSMNEG00000044041) #14	CYP20A1 (ENSMNEG00000045164) #15	ABI2 (ENSMNEG00000028519) #16	RAPH1 (ENSMNEG00000030823) #17	ENSMNEG00000036304	CD28 (ENSMNEG00000033642) #18	ENSMNEG00000030427	CTLA4 (ENSMNEG00000043834) #19	ICOS (ENSMNEG00000029598) #20	PARD3B (ENSMNEG00000040103) #21	ENSMNEG00000031020	NRP2 (ENSMNEG00000039082) #22	INO80D (ENSMNEG00000032459) #23	NDUFS1 (ENSMNEG00000032822) #24	ENSMNEG00000030060 ##25	ZDBF2 (ENSMNEG00000031863) #27	ENSMNEG00000028225	ADAM23 (ENSMNEG00000027959) #28	FAM237A (ENSMNEG00000032870) #29	DYTN (ENSMNEG00000038040) #30	MDH1B (ENSMNEG00000043559) #31	FASTKD2 (ENSMNEG00000043091) #32	CPO (ENSMNEG00000008835)	KLF7 (ENSMNEG00000027996) #34	CREB1 (ENSMNEG00000030274) #35	METTL21A (ENSMNEG00000034465) #36	CCNYL1 (ENSMNEG00000035559) ##37
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00940000154319.u.b.a.b	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552.b #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.b.a ##37
Rhesus	MODERN SPECIES	3	FAM117B (ENSMMUG00000021152) #8	ICA1L (ENSMMUG00000017364) #10	ENSMMUG00000059397	WDR12 (ENSMMUG00000043068) #11	CARF (ENSMMUG00000006418) #12	NBEAL1 (ENSMMUG00000006420) #14	CYP20A1 (ENSMMUG00000005971) #15	ABI2 (ENSMMUG00000000312) #16	RAPH1 (ENSMMUG00000000314) #17	CD28 (ENSMMUG00000057214) #18	CTLA4 (ENSMMUG00000015903) #19	ICOS (ENSMMUG00000002648) #20	ENSMMUG00000052080	PARD3B (ENSMMUG00000014814) #21	ENSMMUG00000055410	NRP2 (ENSMMUG00000020052) #22	INO80D (ENSMMUG00000001053) #23	ENSMMUG00000054550	NDUFS1 (ENSMMUG00000016788) #24	EEF1B2 (ENSMMUG00000001054) ##25	CMKLR2 (ENSMMUG00000008334) #26	ZDBF2 (ENSMMUG00000031276) #27	ADAM23 (ENSMMUG00000011641) #28	FAM237A (ENSMMUG00000052987) #29	DYTN (ENSMMUG00000048288) #30	MDH1B (ENSMMUG00000017734) #31	FASTKD2 (ENSMMUG00000017735) #32	CPO (ENSMMUG00000063052)	ENSMMUG00000051957 #34	KLF7 (ENSMMUG00000000190) #34	CREB1 (ENSMMUG00000022601) #35
Crab-eating macaque	MODERN SPECIES	3	ENSMFAG00000055750	ENSMFAG00000048371	ENSMFAG00000044326 #11	CARF (ENSMFAG00000042636) #12	NBEAL1 (ENSMFAG00000032529) #14	ENSMFAG00000065796	CYP20A1 (ENSMFAG00000036924) #15	ENSMFAG00000048556	ABI2 (ENSMFAG00000031286) #16	ENSMFAG00000003148 #17	ENSMFAG00000062324 #17	CD28 (ENSMFAG00000003864) #18	CTLA4 (ENSMFAG00000004047) #19	ICOS (ENSMFAG00000053159) #20	PARD3B (ENSMFAG00000043904) #21	NRP2 (ENSMFAG00000038385) #22	ENSMFAG00000053377	INO80D (ENSMFAG00000001629) #23	NDUFS1 (ENSMFAG00000039201) #24	ENSMFAG00000038364 ##25	CMKLR2 (ENSMFAG00000013528) #26	ZDBF2 (ENSMFAG00000044616) #27	ADAM23 (ENSMFAG00000030094) #28	FAM237A (ENSMFAG00000031105) #29	DYTN (ENSMFAG00000044098) #30	MDH1B (ENSMFAG00000035811) #31	ENSMFAG00000049460	FASTKD2 (ENSMFAG00000033471) #32	CPO (ENSMFAG00000062349)	KLF7 (ENSMFAG00000039083) #34	ENSMFAG00000041805 #36
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT00940000154319.u.b.a.b	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00950000182810.A.a.a.lb.d	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35
Olive baboon	MODERN SPECIES	1	BMPR2 (ENSPANG00000006512) #7	ENSPANG00000042529	FAM117B (ENSPANG00000009087) #8	ICA1L (ENSPANG00000017467) #10	ENSPANG00000008983 #11	ENSPANG00000008982 #12	NBEAL1 (ENSPANG00000000692) #14	CYP20A1 (ENSPANG00000002439) #15	ABI2 (ENSPANG00000023238) #16	RAPH1 (ENSPANG00000018186) #17	CD28 (ENSPANG00000011488) #18	CTLA4 (ENSPANG00000007100) #19	ICOS (ENSPANG00000010251) #20	ENSPANG00000042490	PARD3B (ENSPANG00000017315) #21	NRP2 (ENSPANG00000011487) #22	INO80D (ENSPANG00000005753) #23	NDUFS1 (ENSPANG00000019101) #24	ENSPANG00000011248 ##25	CMKLR2 (ENSPANG00000007301) #26	ZDBF2 (ENSPANG00000023236) #27	ENSPANG00000032033	ADAM23 (ENSPANG00000025872) #28	FAM237A (ENSPANG00000032174) #29	DYTN (ENSPANG00000011028) #30	MDH1B (ENSPANG00000022792) #31	ENSPANG00000043039	FASTKD2 (ENSPANG00000012835) #32	CPO (ENSPANG00000005004)	KLF7 (ENSPANG00000005240) #34	CREB1 (ENSPANG00000009083) #35
Cercopithecinae_d	ANCESTRAL SPECIES		ENSGT00940000154319.u.b.a.b	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00950000182810.A.a.a.lb.d	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35
Sooty mangabey	MODERN SPECIES	570	BMPR2 (ENSCATG00000033192) #7	ENSCATG00000033526	FAM117B (ENSCATG00000033570) #8	ICA1L (ENSCATG00000036911) #10	ENSCATG00000035496 #11	CARF (ENSCATG00000035061) #12	NBEAL1 (ENSCATG00000036478) #14	CYP20A1 (ENSCATG00000034415) #15	ABI2 (ENSCATG00000038300) #16	RAPH1 (ENSCATG00000044686) #17	ENSCATG00000043923	CD28 (ENSCATG00000043017) #18	CTLA4 (ENSCATG00000036235) #19	ICOS (ENSCATG00000043591) #20	PARD3B (ENSCATG00000022284) #21	NRP2 (ENSCATG00000032051) #22	INO80D (ENSCATG00000044654) #23	NDUFS1 (ENSCATG00000037259) #24	ENSCATG00000037736 ##25	ZDBF2 (ENSCATG00000037091) #27	ENSCATG00000037624	ADAM23 (ENSCATG00000043626) #28	FAM237A (ENSCATG00000036777) #29	DYTN (ENSCATG00000035275) #30	MDH1B (ENSCATG00000035467) #31	FASTKD2 (ENSCATG00000038647) #32	CPO (ENSCATG00000043384)	KLF7 (ENSCATG00000041615) #34	CREB1 (ENSCATG00000037133) #35	METTL21A (ENSCATG00000041598) #36	CCNYL1 (ENSCATG00000037115) ##37
Drill	MODERN SPECIES	1089						NBEAL1 (ENSMLEG00000032708) #14	CYP20A1 (ENSMLEG00000034377) #15	ABI2 (ENSMLEG00000040577) #16	RAPH1 (ENSMLEG00000033969) #17	ENSMLEG00000004995	CD28 (ENSMLEG00000037603) #18	CTLA4 (ENSMLEG00000037639) #19	ICOS (ENSMLEG00000007807) #20	PARD3B (ENSMLEG00000031270) #21	ENSMLEG00000040986	NRP2 (ENSMLEG00000035732) #22	INO80D (ENSMLEG00000039669) #23
Vervet Monkey	MODERN SPECIES	1	NOP58 (ENSCSAG00000010496)	BMPR2 (ENSCSAG00000010485) #7	FAM117B (ENSCSAG00000010474) #8	ICA1L (ENSCSAG00000010466) #10	ENSCSAG00000010442 #11	CARF (ENSCSAG00000010380) #12	NBEAL1 (ENSCSAG00000010364) #14	CYP20A1 (ENSCSAG00000010341) #15	ABI2 (ENSCSAG00000010327) #16	RAPH1 (ENSCSAG00000010318) #17	CD28 (ENSCSAG00000010308) #18	ENSCSAG00000010293	CTLA4 (ENSCSAG00000010288) #19	ICOS (ENSCSAG00000010281) #20	PARD3B (ENSCSAG00000010270) #21	NRP2 (ENSCSAG00000010258) #22	INO80D (ENSCSAG00000010251) #23	NDUFS1 (ENSCSAG00000010247) #24	ENSCSAG00000010238 #25	CMKLR2 (ENSCSAG00000018769) #26	ZDBF2 (ENSCSAG00000010233) #27	ENSCSAG00000010220	ADAM23 (ENSCSAG00000010198) #28	DYTN (ENSCSAG00000010181) #30	MDH1B (ENSCSAG00000010163) #31	FASTKD2 (ENSCSAG00000010158) #32	CPO (ENSCSAG00000010143)	KLF7 (ENSCSAG00000010117) #34	CREB1 (ENSCSAG00000010111) #35	METTL21A (ENSCSAG00000010107) #36	CCNYL1 (ENSCSAG00000010093) ##37
Rhinopithecus	ANCESTRAL SPECIES	73	ENSGT00390000008128.c.a.a	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b.m.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.a.a ##25	ENSGT00940000160642 #26	ENSGT00390000015060.n	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b.c #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.b #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36
Black snub-nosed monkey	MODERN SPECIES	1164															PARD3B (ENSRBIG00000039853) #21	NRP2 (ENSRBIG00000035417) #22	INO80D (ENSRBIG00000044868) #23	NDUFS1 (ENSRBIG00000020611) #24	ENSRBIG00000040112 ##25	ENSRBIG00000031452	ZDBF2 (ENSRBIG00000033928) #27	ADAM23 (ENSRBIG00000032092) #28	FAM237A (ENSRBIG00000033114) #29	DYTN (ENSRBIG00000028505) #30	ENSRBIG00000025761 #31	FASTKD2 (ENSRBIG00000039778) #32	CPO (ENSRBIG00000037719)	KLF7 (ENSRBIG00000040855) #34
Golden snub-nosed monkey	MODERN SPECIES	2758				CARF (ENSRROG00000045180) #12	NBEAL1 (ENSRROG00000015491) #14	CYP20A1 (ENSRROG00000040044) #15	ABI2 (ENSRROG00000040959) #16	RAPH1 (ENSRROG00000010278) #17	ENSRROG00000006311	ENSRROG00000034411	CD28 (ENSRROG00000043826) #18	ENSRROG00000034095	CTLA4 (ENSRROG00000028565) #19	ICOS (ENSRROG00000038288) #20	PARD3B (ENSRROG00000013717) #21	NRP2 (ENSRROG00000040911) #22	INO80D (ENSRROG00000003571) #23	NDUFS1 (ENSRROG00000033953) #24	ENSRROG00000041925 ##25	CMKLR2 (ENSRROG00000015659) #26	ENSRROG00000038360	ZDBF2 (ENSRROG00000032109) #27	ADAM23 (ENSRROG00000036437) #28
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00940000156449 #7	ENSGT00390000010308.cb.b	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00390000000685.o.b.a	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00390000001455.`b.a	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.b.b ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.a #34	ENSGT00940000155408 #35	ENSGT00940000157249.c #36
Cebidae	ANCESTRAL SPECIES	11	ENSGT00940000156449 #7	ENSGT00390000010308.cb.b	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00390000000685.o.b.a	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00390000001455.`b.a	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.b.b.a ##25	ENSGT00940000160642 #26	ENSGT00950000183014.f.a.g.b.b.b.b ##25	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.a #34	ENSGT00940000155408 #35
Marmoset	MODERN SPECIES	18	BMPR2 (ENSCJAG00000005066) #7	FAM117B (ENSCJAG00000047724) #8	ICA1L (ENSCJAG00000005162) #10	WDR12 (ENSCJAG00000005171) #11	CARF (ENSCJAG00000005224) #12	NBEAL1 (ENSCJAG00000031696) #14	ENSCJAG00000081284	CYP20A1 (ENSCJAG00000039360) #15	ABI2 (ENSCJAG00000005399) #16	RAPH1 (ENSCJAG00000005339) #17	CD28 (ENSCJAG00000042321) #18	CTLA4 (ENSCJAG00000005495) #19	ICOS (ENSCJAG00000005516) #20	PARD3B (ENSCJAG00000005521) #21	ENSCJAG00000076910	NRP2 (ENSCJAG00000005577) #22	ENSCJAG00000045767	INO80D (ENSCJAG00000005682) #23	NDUFS1 (ENSCJAG00000005725) #24	ENSCJAG00000005805 ##25	CMKLR2 (ENSCJAG00000077852) #26	ENSCJAG00000079037	ENSCJAG00000085853	ZDBF2 (ENSCJAG00000005812) #27	ADAM23 (ENSCJAG00000005821) #28	DYTN (ENSCJAG00000005926) #30	MDH1B (ENSCJAG00000005953) #31	FASTKD2 (ENSCJAG00000005971) #32	ENSCJAG00000073541	CPO (ENSCJAG00000005991)	ENSCJAG00000006023 #34
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT00940000156449 #7	ENSGT00390000010308.cb.b	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00390000000685.o.b.a	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00390000001455.`b.a	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.b.b.a ##25	ENSGT00950000183014.f.a.g.b.b.b.b ##25	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235.g.a #34	ENSGT00940000155408 #35	ENSGT00940000157249.c #36
Capuchin	MODERN SPECIES	101	ENSCCAG00000026090	FAM117B (ENSCCAG00000031732) #8	ICA1L (ENSCCAG00000027883) #10	WDR12 (ENSCCAG00000005461) #11	CARF (ENSCCAG00000019881) #12	NBEAL1 (ENSCCAG00000021158) #14	ENSCCAG00000031449	CYP20A1 (ENSCCAG00000036341) #15	ABI2 (ENSCCAG00000027705) #16	RAPH1 (ENSCCAG00000029188) #17	ENSCCAG00000031812	CD28 (ENSCCAG00000035864) #18	CTLA4 (ENSCCAG00000029978) #19	ICOS (ENSCCAG00000019210) #20	PARD3B (ENSCCAG00000034949) #21	NRP2 (ENSCCAG00000026361) #22	ENSCCAG00000029458	LSM5 (ENSCCAG00000032792)	INO80D (ENSCCAG00000028441) #23	NDUFS1 (ENSCCAG00000021875) #24	ENSCCAG00000033644 ##25	ENSCCAG00000029547	ZDBF2 (ENSCCAG00000026606) #27	ADAM23 (ENSCCAG00000031476) #28	FAM237A (ENSCCAG00000025434) #29	DYTN (ENSCCAG00000036386) #30
Bolivian squirrel monkey	MODERN SPECIES	56	ENSSBOG00000016073 #8	ICA1L (ENSSBOG00000032973) #10	WDR12 (ENSSBOG00000015132) #11	CARF (ENSSBOG00000032523) #12	NBEAL1 (ENSSBOG00000032563) #14	ENSSBOG00000030482	CYP20A1 (ENSSBOG00000025384) #15	ABI2 (ENSSBOG00000031443) #16	RAPH1 (ENSSBOG00000036069) #17	ENSSBOG00000030839	CD28 (ENSSBOG00000032327) #18	ENSSBOG00000030167	CTLA4 (ENSSBOG00000034817) #19	ICOS (ENSSBOG00000000744) #20	PARD3B (ENSSBOG00000029267) #21	NRP2 (ENSSBOG00000035290) #22	ENSSBOG00000034794	INO80D (ENSSBOG00000020878) #23	NDUFS1 (ENSSBOG00000028426) #24	ENSSBOG00000036258 ##25	ZDBF2 (ENSSBOG00000011111) #27	ADAM23 (ENSSBOG00000001918) #28	FAM237A (ENSSBOG00000033809) #29	DYTN (ENSSBOG00000026100) #30	MDH1B (ENSSBOG00000029880) #31	FASTKD2 (ENSSBOG00000029513) #32	CPO (ENSSBOG00000030310)	ENSSBOG00000027628 #34	ENSSBOG00000018885	CREB1 (ENSSBOG00000034085) #35	ENSSBOG00000033378 #36
Mas night monkey	MODERN SPECIES	357	FAM117B (ENSANAG00000032237) #8	ICA1L (ENSANAG00000036249) #10	WDR12 (ENSANAG00000030065) #11	CARF (ENSANAG00000032508) #12	NBEAL1 (ENSANAG00000029269) #14	ENSANAG00000023562	CYP20A1 (ENSANAG00000026608) #15	ABI2 (ENSANAG00000037183) #16	RAPH1 (ENSANAG00000037926) #17	CD28 (ENSANAG00000027528) #18	CTLA4 (ENSANAG00000027709) #19	ICOS (ENSANAG00000027294) #20	ENSANAG00000037162	ENSANAG00000037079	PARD3B (ENSANAG00000024698) #21	NRP2 (ENSANAG00000033490) #22	ENSANAG00000037758	INO80D (ENSANAG00000029568) #23	NDUFS1 (ENSANAG00000020079) #24	ENSANAG00000024356 ##25	ZDBF2 (ENSANAG00000020305) #27	ADAM23 (ENSANAG00000035087) #28	FAM237A (ENSANAG00000024386) #29	DYTN (ENSANAG00000031986) #30	MDH1B (ENSANAG00000008683) #31	FASTKD2 (ENSANAG00000034550) #32	CPO (ENSANAG00000023194)	KLF7 (ENSANAG00000036279) #34	CREB1 (ENSANAG00000025888) #35	ENSANAG00000020586 #36	CCNYL1 (ENSANAG00000020995) ##37
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Lemuriformes_a	ANCESTRAL SPECIES	15	ENSGT00940000153534.A	ENSGT00390000001413.b	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Coquerels sifaka	MODERN SPECIES	847															PARD3B (ENSPCOG00000018611) #21	NRP2 (ENSPCOG00000020112) #22	INO80D (ENSPCOG00000024934) #23	ENSPCOG00000018961 #24	EEF1B2 (ENSPCOG00000016289) #25	ENSPCOG00000013632	ZDBF2 (ENSPCOG00000019226) #27	ADAM23 (ENSPCOG00000023473) #28	FAM237A (ENSPCOG00000018015) #29	DYTN (ENSPCOG00000020018) #30	MDH1B (ENSPCOG00000017083) #31	FASTKD2 (ENSPCOG00000028714) #32	CPO (ENSPCOG00000028646)	KLF7 (ENSPCOG00000018231) #34	CREB1 (ENSPCOG00000021255) #35	METTL21A (ENSPCOG00000018442) #36	ENSPCOG00000013286 ##37
Greater bamboo lemur	MODERN SPECIES	388											CD28 (ENSPSMG00000022341) #18	ENSPSMG00000022328	CTLA4 (ENSPSMG00000022319) #19	ICOS (ENSPSMG00000022309) #20	PARD3B (ENSPSMG00000022181) #21	NRP2 (ENSPSMG00000021719) #22	INO80D (ENSPSMG00000021497) #23	NDUFS1 (ENSPSMG00000021383) #24	EEF1B2 (ENSPSMG00000021215) #25	CMKLR2 (ENSPSMG00000021198) #26
Mouse lemur	MODERN SPECIES	30	FAM117B (ENSMICG00000042296) #8	SLC16A14 (ENSMICG00000010609)	FBXO36 (ENSMICG00000034045)	ICA1L (ENSMICG00000002701) #10	ENSMICG00000044580 #11	CARF (ENSMICG00000011943) #12	ENSMICG00000026752	NBEAL1 (ENSMICG00000003736) #14	CYP20A1 (ENSMICG00000010806) #15	ABI2 (ENSMICG00000048062) #16	RAPH1 (ENSMICG00000001085) #17	CD28 (ENSMICG00000044645) #18	CTLA4 (ENSMICG00000032206) #19	ICOS (ENSMICG00000037046) #20	PARD3B (ENSMICG00000009358) #21	NRP2 (ENSMICG00000009376) #22	ENSMICG00000044290	INO80D (ENSMICG00000010590) #23	NDUFS1 (ENSMICG00000010601) #24	EEF1B2 (ENSMICG00000047922) #25	ZDBF2 (ENSMICG00000044925) #27	ADAM23 (ENSMICG00000009477) #28	FAM237A (ENSMICG00000044768) #29	DYTN (ENSMICG00000027944) #30	MDH1B (ENSMICG00000009487) #31	FASTKD2 (ENSMICG00000026515) #32	CPO (ENSMICG00000015370)	KLF7 (ENSMICG00000037405) #34	CREB1 (ENSMICG00000009731) #35	METTL21A (ENSMICG00000009739) #36	ENSMICG00000009744 ##37
Bushbaby	MODERN SPECIES	128	ENSOGAG00000030345	NOP58 (ENSOGAG00000003906)	BMPR2 (ENSOGAG00000007765) #7	FAM117B (ENSOGAG00000001497) #8	ICA1L (ENSOGAG00000001500) #10	WDR12 (ENSOGAG00000006573) #11	CARF (ENSOGAG00000032187) #12	NBEAL1 (ENSOGAG00000015089) #14	CYP20A1 (ENSOGAG00000015164) #15	ENSOGAG00000033059	ABI2 (ENSOGAG00000011602) #16	RAPH1 (ENSOGAG00000015099) #17	CD28 (ENSOGAG00000012567) #18	CTLA4 (ENSOGAG00000002578) #19	PARD3B (ENSOGAG00000007396) #21	NRP2 (ENSOGAG00000007405) #22	INO80D (ENSOGAG00000005756) #23	NDUFS1 (ENSOGAG00000011226) #24	EEF1B2 (ENSOGAG00000011229) #25	CMKLR2 (ENSOGAG00000011232) #26	ENSOGAG00000031172	ZDBF2 (ENSOGAG00000016996) #27	ENSOGAG00000031644	ADAM23 (ENSOGAG00000016997) #28	DYTN (ENSOGAG00000027434) #30	MDH1B (ENSOGAG00000017006) #31	FASTKD2 (ENSOGAG00000017008) #32	CPO (ENSOGAG00000017012)	KLF7 (ENSOGAG00000017014) #34	CREB1 (ENSOGAG00000007121) #35	METTL21A (ENSOGAG00000007128) #36
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Eulipotyphla	ANCESTRAL SPECIES	1829															ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22
Hedgehog	MODERN SPECIES	1961																NRP2 (ENSEEUG00000012888) #22
Common shrew	MODERN SPECIES	1244															PARD3B (ENSSARG00000010690) #21	NRP2 (ENSSARG00000010738) #22
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Suina	ANCESTRAL SPECIES	3	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Chacoan peccary	MODERN SPECIES	91	SUMO1 (ENSCWAG00000016775)	NOP58 (ENSCWAG00000016884)	BMPR2 (ENSCWAG00000016944) #7	FAM117B (ENSCWAG00000017046) #8	ICA1L (ENSCWAG00000017108) #10	WDR12 (ENSCWAG00000017209) #11	CARF (ENSCWAG00000017264) #12	NBEAL1 (ENSCWAG00000017563) #14	CYP20A1 (ENSCWAG00000017608) #15	ABI2 (ENSCWAG00000017671) #16	RAPH1 (ENSCWAG00000018090) #17	CD28 (ENSCWAG00000020352) #18	CTLA4 (ENSCWAG00000020380) #19	ICOS (ENSCWAG00000020408) #20	PARD3B (ENSCWAG00000020460) #21	NRP2 (ENSCWAG00000020581) #22	INO80D (ENSCWAG00000020612) #23	ENSCWAG00000020619	NDUFS1 (ENSCWAG00000020647) #24	EEF1B2 (ENSCWAG00000020782) #25	CMKLR2 (ENSCWAG00000020796) #26	ENSCWAG00000020804 #27	ENSCWAG00000020821
Pig	MODERN SPECIES	6	BMPR2 (ENSSSCG00000016113) #7	FAM117B (ENSSSCG00000016114) #8	ENSSSCG00000043400	ICA1L (ENSSSCG00000016115) #10	WDR12 (ENSSSCG00000016116) #11	CARF (ENSSSCG00000016117) #12	NBEAL1 (ENSSSCG00000016118) #14	CYP20A1 (ENSSSCG00000055761) #15	ABI2 (ENSSSCG00000034630) #16	ENSSSCG00000016119 #17	CD28 (ENSSSCG00000028561) #18	CTLA4 (ENSSSCG00000016122) #19	ICOS (ENSSSCG00000025042) #20	PARD3B (ENSSSCG00000016123) #21	ENSSSCG00000055400	NRP2 (ENSSSCG00000026383) #22	INO80D (ENSSSCG00000016125) #23	NDUFS1 (ENSSSCG00000016127) #24	EEF1B2 (ENSSSCG00000016128) #25	CMKLR2 (ENSSSCG00000016129) #26	ZDBF2 (ENSSSCG00000016130) #27	ADAM23 (ENSSSCG00000016131) #28	FAM237A (ENSSSCG00000036691) #29	DYTN (ENSSSCG00000035158) #30	MDH1B (ENSSSCG00000016133) #31	FASTKD2 (ENSSSCG00000016134) #32	CPO (ENSSSCG00000016135)	KLF7 (ENSSSCG00000029998) #34	ENSSSCG00000042730	CREB1 (ENSSSCG00000034395) #35	METTL21A (ENSSSCG00000036466) #36
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Cetacea	ANCESTRAL SPECIES	14	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00390000001958.n.a.g	ENSGT00940000154453.b.b ##37
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00390000001958.n.a.g	ENSGT00390000004738.q.b
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00390000001958.n.a.g	ENSGT00940000154453.b.b ##37
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00960000190610	ENSGT00440000037606.b #27	ENSGT00910000144184.r.a.a.a.a	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00950000183010.a.b.a.a.b	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00960000190610	ENSGT00440000037606.b #27	ENSGT00910000144184.r.a.a.a.a	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36
Narwhal	MODERN SPECIES	302	FAM117B (ENSMMNG00015007345) #8	ICA1L (ENSMMNG00015007312) #10	WDR12 (ENSMMNG00015007273) #11	CARF (ENSMMNG00015007132) #12	NBEAL1 (ENSMMNG00015007045) #14	CYP20A1 (ENSMMNG00015007001) #15	ABI2 (ENSMMNG00015006963) #16	RAPH1 (ENSMMNG00015006494) #17	ENSMMNG00015006290	CD28 (ENSMMNG00015006278) #18	CTLA4 (ENSMMNG00015006260) #19	ICOS (ENSMMNG00015006232) #20	ENSMMNG00015006206	ENSMMNG00015006192	PARD3B (ENSMMNG00015005987) #21	NRP2 (ENSMMNG00015005855) #22	INO80D (ENSMMNG00015005802) #23	NDUFS1 (ENSMMNG00015005695) #24	EEF1B2 (ENSMMNG00015005617) #25	CMKLR2 (ENSMMNG00015005602) #26	ENSMMNG00015005593	ZDBF2 (ENSMMNG00015005582) #27	ENSMMNG00015005570	ADAM23 (ENSMMNG00015005478) #28	FAM237A (ENSMMNG00015005439) #29	DYTN (ENSMMNG00015005422) #30	MDH1B (ENSMMNG00015005351) #31	FASTKD2 (ENSMMNG00015005336) #32	KLF7 (ENSMMNG00015005320) #34	CREB1 (ENSMMNG00015005293) #35	METTL21A (ENSMMNG00015005268) #36
Beluga whale	MODERN SPECIES	84	ICA1L (ENSDLEG00000018321) #10	WDR12 (ENSDLEG00000018347) #11	CARF (ENSDLEG00000018361) #12	NBEAL1 (ENSDLEG00000018755) #14	ENSDLEG00000020428 #16	ENSDLEG00000008100 #16	RAPH1 (ENSDLEG00000008223) #17	ENSDLEG00000008980	ENSDLEG00000009004 #18	CTLA4 (ENSDLEG00000009020) #19	ICOS (ENSDLEG00000009050) #20	ENSDLEG00000009073	ENSDLEG00000009090	ENSDLEG00000009108	PARD3B (ENSDLEG00000009127) #21	NRP2 (ENSDLEG00000009192) #22	INO80D (ENSDLEG00000009298) #23	NDUFS1 (ENSDLEG00000009340) #24	EEF1B2 (ENSDLEG00000009390) #25	GPR1 (ENSDLEG00000009434) #26	ENSDLEG00000009440	ZDBF2 (ENSDLEG00000009453) #27	ADAM23 (ENSDLEG00000009497) #28	FAM237A (ENSDLEG00000009620) #29	DYTN (ENSDLEG00000009655) #30	MDH1B (ENSDLEG00000009773) #31	FASTKD2 (ENSDLEG00000009822) #32	KLF7 (ENSDLEG00000009871) #34	CREB1 (ENSDLEG00000009895) #35	METTL21A (ENSDLEG00000009925) #36	ENSDLEG00000009942
Vaquita	MODERN SPECIES	18	SUMO1 (ENSPSNG00000012848)	NOP58 (ENSPSNG00000012735)	BMPR2 (ENSPSNG00000012669) #7	FAM117B (ENSPSNG00000012551) #8	ICA1L (ENSPSNG00000012492) #10	WDR12 (ENSPSNG00000012441) #11	CARF (ENSPSNG00000011886) #12	NBEAL1 (ENSPSNG00000011649) #14	CYP20A1 (ENSPSNG00000011532) #15	ABI2 (ENSPSNG00000011330) #16	RAPH1 (ENSPSNG00000009801) #17	ENSPSNG00000009309 #18	CTLA4 (ENSPSNG00000009249) #19	ICOS (ENSPSNG00000009099) #20	PARD3B (ENSPSNG00000008898) #21	NRP2 (ENSPSNG00000008707) #22	ENSPSNG00000008614	INO80D (ENSPSNG00000008590) #23	NDUFS1 (ENSPSNG00000008252) #24	EEF1B2 (ENSPSNG00000008153) #25	CMKLR2 (ENSPSNG00000008130) #26	ENSPSNG00000008115	ZDBF2 (ENSPSNG00000008096) #27	ENSPSNG00000008082	ADAM23 (ENSPSNG00000007702) #28	FAM237A (ENSPSNG00000022142) #29	DYTN (ENSPSNG00000022128) #30	MDH1B (ENSPSNG00000022108) #31	FASTKD2 (ENSPSNG00000022088) #32	KLF7 (ENSPSNG00000022054) #34	CREB1 (ENSPSNG00000022021) #35
Dolphin	MODERN SPECIES	6557																NRP2 (ENSTTRG00000014816) #22
Sperm whale	MODERN SPECIES	11	BMPR2 (ENSPCTG00005003518) #7	FAM117B (ENSPCTG00005003547) #8	ICA1L (ENSPCTG00005003564) #10	WDR12 (ENSPCTG00005003584) #11	CARF (ENSPCTG00005003645) #12	NBEAL1 (ENSPCTG00005003780) #14	CYP20A1 (ENSPCTG00005003802) #15	ABI2 (ENSPCTG00005003833) #16	RAPH1 (ENSPCTG00005003938) #17	ENSPCTG00005005119 #18	CTLA4 (ENSPCTG00005005168) #19	ICOS (ENSPCTG00005005246) #20	ENSPCTG00005005318	ENSPCTG00005005328	PARD3B (ENSPCTG00005005375) #21	NRP2 (ENSPCTG00005005530) #22	ENSPCTG00005006370	INO80D (ENSPCTG00005006389) #23	ENSPCTG00005006412	NDUFS1 (ENSPCTG00005006448) #24	EEF1B2 (ENSPCTG00005006746) #25	GPR1 (ENSPCTG00005006803) #26	ZDBF2 (ENSPCTG00005006840) #27	ADAM23 (ENSPCTG00005007031) #28	FAM237A (ENSPCTG00005007294) #29	DYTN (ENSPCTG00005007310) #30	MDH1B (ENSPCTG00005007378) #31	FASTKD2 (ENSPCTG00005004965) #32	KLF7 (ENSPCTG00005005002) #34	CREB1 (ENSPCTG00005005085) #35	METTL21A (ENSPCTG00005005122) #36
Blue whale	MODERN SPECIES	18	FAM117B (ENSBMSG00010006217) #8	ICA1L (ENSBMSG00010006262) #10	WDR12 (ENSBMSG00010006329) #11	CARF (ENSBMSG00010006417) #12	ENSBMSG00010006579 #14	ENSBMSG00010006612 #14	CYP20A1 (ENSBMSG00010006657) #15	ABI2 (ENSBMSG00010006723) #16	ENSBMSG00010000193 #18	ENSBMSG00010000215 #18	ENSBMSG00010000230	ENSBMSG00010000252	ICOS (ENSBMSG00010000278) #20	ENSBMSG00010000353	PARD3B (ENSBMSG00010000409) #21	NRP2 (ENSBMSG00010000535) #22	ENSBMSG00010001002	INO80D (ENSBMSG00010001021) #23	ENSBMSG00010001036	NDUFS1 (ENSBMSG00010001085) #24	EEF1B2 (ENSBMSG00010001199) #25	CMKLR2 (ENSBMSG00010001229) #26	ZDBF2 (ENSBMSG00010001246) #27	ADAM23 (ENSBMSG00010001305) #28	FAM237A (ENSBMSG00010001408) #29	DYTN (ENSBMSG00010001424) #30	MDH1B (ENSBMSG00010001465) #31	FASTKD2 (ENSBMSG00010001509) #32	KLF7 (ENSBMSG00010001534) #34	CREB1 (ENSBMSG00010001606) #35	METTL21A (ENSBMSG00010001644) #36
Pecora	ANCESTRAL SPECIES	16	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Percora_a	ANCESTRAL SPECIES	5	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Bovidae	ANCESTRAL SPECIES	8	ENSGT00940000154319.v.cb	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Bovinae	ANCESTRAL SPECIES	5	ENSGT00940000154319.v.cb	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Bos	ANCESTRAL SPECIES	6	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Bos_b	ANCESTRAL SPECIES	3	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT01100000263480.a.a.b.a.a.a.b.b.a.a.a.a.a.a	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00510000047245.w.a.a.b	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35
Cow	MODERN SPECIES	11	CARF (ENSBTAG00000016000) #12	ENSBTAG00000019994	NBEAL1 (ENSBTAG00000014469) #14	CYP20A1 (ENSBTAG00000000851) #15	ABI2 (ENSBTAG00000011017) #16	RAPH1 (ENSBTAG00000027201) #17	CD28 (ENSBTAG00000007445) #18	ENSBTAG00000051061	CTLA4 (ENSBTAG00000013170) #19	ICOS (ENSBTAG00000021596) #20	ENSBTAG00000040367	ENSBTAG00000051630	ENSBTAG00000049320	PARD3B (ENSBTAG00000010293) #21	ENSBTAG00000053833 #21	NRP2 (ENSBTAG00000011971) #22	INO80D (ENSBTAG00000014407) #23	ENSBTAG00000055132	NDUFS1 (ENSBTAG00000021976) #24	EEF1B2 (ENSBTAG00000021979) #25	CMKLR2 (ENSBTAG00000017043) #26	ZDBF2 (ENSBTAG00000031166) #27	ADAM23 (ENSBTAG00000019694) #28	ENSBTAG00000055316	FAM237A (ENSBTAG00000050134) #29	DYTN (ENSBTAG00000046454) #30	MDH1B (ENSBTAG00000016192) #31	FASTKD2 (ENSBTAG00000016193) #32	CPO (ENSBTAG00000019190)	KLF7 (ENSBTAG00000044097) #34	CREB1 (ENSBTAG00000005474) #35
Hybrid Bos Indicus	MODERN SPECIES	11	BMPR2 (ENSBIXG00005031582) #7	FAM117B (ENSBIXG00005031583) #8	ICA1L (ENSBIXG00005031584) #10	WDR12 (ENSBIXG00005031585) #11	CARF (ENSBIXG00005031586) #12	ENSBIXG00005031587	NBEAL1 (ENSBIXG00005031588) #14	CYP20A1 (ENSBIXG00005031589) #15	ABI2 (ENSBIXG00005031590) #16	RAPH1 (ENSBIXG00005031591) #17	CD28 (ENSBIXG00005031593) #18	CTLA4 (ENSBIXG00005031594) #19	ICOS (ENSBIXG00005031595) #20	PARD3B (ENSBIXG00005031598) #21	ENSBIXG00005031599	NRP2 (ENSBIXG00005031600) #22	INO80D (ENSBIXG00005031603) #23	ENSBIXG00005031604	NDUFS1 (ENSBIXG00005031605) #24	ENSBIXG00005031606 #25	CMKLR2 (ENSBIXG00005031611) #26	ZDBF2 (ENSBIXG00005031612) #27	ADAM23 (ENSBIXG00005031613) #28	ENSBIXG00005031614	DYTN (ENSBIXG00005031615) #30	MDH1B (ENSBIXG00005031616) #31	FASTKD2 (ENSBIXG00005031617) #32	CPO (ENSBIXG00005031618)	KLF7 (ENSBIXG00005031620) #34	ENSBIXG00005031623	CREB1 (ENSBIXG00005031624) #35
Bos_a	ANCESTRAL SPECIES	4	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00510000047245.w.a.a.b	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36
Wild yak	MODERN SPECIES	1701															ENSBMUG00000019977 #21	NRP2 (ENSBMUG00000019949) #22	INO80D (ENSBMUG00000019906) #23	NDUFS1 (ENSBMUG00000019884) #24	ENSBMUG00000019833 #25	CMKLR2 (ENSBMUG00000019826) #26
Domestic yak	MODERN SPECIES	11	ICA1L (ENSBGRG00000016892) #10	WDR12 (ENSBGRG00000016744) #11	ENSBGRG00000016729	CARF (ENSBGRG00000016286) #12	ENSBGRG00000016261	NBEAL1 (ENSBGRG00000016043) #14	CYP20A1 (ENSBGRG00000015562) #15	ABI2 (ENSBGRG00000014834) #16	ENSBGRG00000012733 #17	CD28 (ENSBGRG00000012545) #18	CTLA4 (ENSBGRG00000012384) #19	ENSBGRG00000012357	ICOS (ENSBGRG00000012246) #20	ENSBGRG00000012209	PARD3B (ENSBGRG00000011721) #21	NRP2 (ENSBGRG00000010098) #22	ENSBGRG00000010010	INO80D (ENSBGRG00000009960) #23	NDUFS1 (ENSBGRG00000009516) #24	ENSBGRG00000009445 #25	CMKLR2 (ENSBGRG00000009401) #26	ZDBF2 (ENSBGRG00000009322) #27	ENSBGRG00000009270	ADAM23 (ENSBGRG00000008490) #28	FAM237A (ENSBGRG00000008425) #29	MDH1B (ENSBGRG00000008141) #31	FASTKD2 (ENSBGRG00000008051) #32	CPO (ENSBGRG00000007969)	ENSBGRG00000007943	KLF7 (ENSBGRG00000007842) #34	CREB1 (ENSBGRG00000007627) #35
American bison	MODERN SPECIES	3330	NOP58 (ENSBBBG00000012170)	BMPR2 (ENSBBBG00000012144) #7	ENSBBBG00000002273 #8	ENSBBBG00000012094 #8	ICA1L (ENSBBBG00000012090) #10	WDR12 (ENSBBBG00000012064) #11	CARF (ENSBBBG00000012044) #12	NBEAL1 (ENSBBBG00000011985) #14	CYP20A1 (ENSBBBG00000002236) #15	ABI2 (ENSBBBG00000011940) #16	ENSBBBG00000011830 #17	CD28 (ENSBBBG00000002157) #18	CTLA4 (ENSBBBG00000002155) #19	ICOS (ENSBBBG00000011656) #20	PARD3B (ENSBBBG00000011555) #21	NRP2 (ENSBBBG00000011269) #22	INO80D (ENSBBBG00000011164) #23	NDUFS1 (ENSBBBG00000011148) #24	ENSBBBG00000011052 #25	CMKLR2 (ENSBBBG00000011031) #26	ZDBF2 (ENSBBBG00000011029) #27	ADAM23 (ENSBBBG00000011005) #28	FAM237A (ENSBBBG00000010954) #29	DYTN (ENSBBBG00000010949) #30	MDH1B (ENSBBBG00000010925) #31	FASTKD2 (ENSBBBG00000010905) #32	CPO (ENSBBBG00000010898)	ENSBBBG00000010890	KLF7 (ENSBBBG00000010885) #34	CREB1 (ENSBBBG00000010873) #35	METTL21A (ENSBBBG00000010854) #36
Caprinae	ANCESTRAL SPECIES	5	ENSGT00940000154319.v.cb	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.u.a.a.b.b #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Goat	MODERN SPECIES	11	NOP58 (ENSCHIG00000025013)	BMPR2 (ENSCHIG00000020243) #7	FAM117B (ENSCHIG00000014630) #8	ICA1L (ENSCHIG00000013077) #10	WDR12 (ENSCHIG00000009469) #11	CARF (ENSCHIG00000023655) #12	ENSCHIG00000016764	NBEAL1 (ENSCHIG00000000921) #14	CYP20A1 (ENSCHIG00000022946) #15	ABI2 (ENSCHIG00000002652) #16	RAPH1 (ENSCHIG00000025930) #17	CD28 (ENSCHIG00000024564) #18	CTLA4 (ENSCHIG00000008042) #19	ICOS (ENSCHIG00000024943) #20	PARD3B (ENSCHIG00000007723) #21	NRP2 (ENSCHIG00000016092) #22	INO80D (ENSCHIG00000010718) #23	NDUFS1 (ENSCHIG00000014971) #24	EEF1B2 (ENSCHIG00000026794) #25	CMKLR2 (ENSCHIG00000007661) #26	ZDBF2 (ENSCHIG00000022575) #27	ADAM23 (ENSCHIG00000011689) #28	FAM237A (ENSCHIG00000010865) #29	DYTN (ENSCHIG00000016602) #30	MDH1B (ENSCHIG00000022560) #31	FASTKD2 (ENSCHIG00000015121) #32	ENSCHIG00000003872	ENSCHIG00000026347	CPO (ENSCHIG00000020644)	KLF7 (ENSCHIG00000006619) #34	CREB1 (ENSCHIG00000027161) #35
Rambouillet Sheep	MODERN SPECIES	11	NOP58 (ENSOARG00020023408)	BMPR2 (ENSOARG00020006563) #7	FAM117B (ENSOARG00020006688) #8	ICA1L (ENSOARG00020006778) #10	WDR12 (ENSOARG00020006896) #11	CARF (ENSOARG00020006968) #12	NBEAL1 (ENSOARG00020007440) #14	CYP20A1 (ENSOARG00020007538) #15	ABI2 (ENSOARG00020007596) #16	RAPH1 (ENSOARG00020007863) #17	ENSOARG00020008167	CD28 (ENSOARG00020008197) #18	CTLA4 (ENSOARG00020008302) #19	ICOS (ENSOARG00020008420) #20	PARD3B (ENSOARG00020008587) #21	NRP2 (ENSOARG00020013172) #22	ENSOARG00020013371	INO80D (ENSOARG00020013391) #23	NDUFS1 (ENSOARG00020013502) #24	ENSOARG00020014163 #25	GPR1 (ENSOARG00020014248) #26	ZDBF2 (ENSOARG00020014286) #27	ADAM23 (ENSOARG00020014405) #28	FAM237A (ENSOARG00020014982) #29	DYTN (ENSOARG00020015031) #30	MDH1B (ENSOARG00020015160) #31	FASTKD2 (ENSOARG00020015403) #32	CPO (ENSOARG00020015466)	KLF7 (ENSOARG00020015555) #34	CREB1 (ENSOARG00020015664) #35	METTL21A (ENSOARG00020015859) #36
Siberian musk deer	MODERN SPECIES	352											CD28 (ENSMMSG00000016228) #18	CTLA4 (ENSMMSG00000016291) #19	ICOS (ENSMMSG00000016369) #20	ENSMMSG00000016441	PARD3B (ENSMMSG00000016488) #21	NRP2 (ENSMMSG00000016704) #22	INO80D (ENSMMSG00000016888) #23	NDUFS1 (ENSMMSG00000016943) #24	ENSMMSG00000017130 #25	ZDBF2 (ENSMMSG00000017183) #27	ADAM23 (ENSMMSG00000017291) #28	FAM237A (ENSMMSG00000017572) #29	DYTN (ENSMMSG00000017587) #30	MDH1B (ENSMMSG00000017649) #31	FASTKD2 (ENSMMSG00000017717) #32	CPO (ENSMMSG00000017798)	KLF7 (ENSMMSG00000017874) #34	ENSMMSG00000017910	CREB1 (ENSMMSG00000017935) #35	ENSMMSG00000017981 #36	ENSMMSG00000018078 #37
Yarkand deer	MODERN SPECIES	31	ICA1L (ENSCHYG00000003466) #10	WDR12 (ENSCHYG00000003428) #11	ENSCHYG00000003419	CARF (ENSCHYG00000003336) #12	NBEAL1 (ENSCHYG00000003290) #14	CYP20A1 (ENSCHYG00000003265) #15	ENSCHYG00000003256	ABI2 (ENSCHYG00000003231) #16	RAPH1 (ENSCHYG00000002595) #17	CD28 (ENSCHYG00000002432) #18	CTLA4 (ENSCHYG00000002394) #19	ICOS (ENSCHYG00000002371) #20	ENSCHYG00000002349	ENSCHYG00000002345	PARD3B (ENSCHYG00000002220) #21	NRP2 (ENSCHYG00000002124) #22	ENSCHYG00000002093	INO80D (ENSCHYG00000002072) #23	NDUFS1 (ENSCHYG00000001983) #24	ENSCHYG00000001947 #25	ENSCHYG00000001938	CMKLR2 (ENSCHYG00000001927) #26	ZDBF2 (ENSCHYG00000001897) #27	ADAM23 (ENSCHYG00000001792) #28	FAM237A (ENSCHYG00000001756) #29	DYTN (ENSCHYG00000001729) #30	ENSCHYG00000001715	MDH1B (ENSCHYG00000001680) #31	FASTKD2 (ENSCHYG00000001648) #32	CPO (ENSCHYG00000001618)	KLF7 (ENSCHYG00000001583) #34
Camelidae	ANCESTRAL SPECIES	58	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Alpaca	MODERN SPECIES	2771			BMPR2 (ENSVPAG00000009496) #7	ENSVPAG00000009497 #8	ICA1L (ENSVPAG00000009498) #10	WDR12 (ENSVPAG00000009500) #11	CARF (ENSVPAG00000009501) #12	ENSVPAG00000009502 #14	ENSVPAG00000009503 #14	CYP20A1 (ENSVPAG00000009505) #15	ABI2 (ENSVPAG00000009506) #16	RAPH1 (ENSVPAG00000009507) #17	CD28 (ENSVPAG00000009510) #18	ICOS (ENSVPAG00000009512) #20	PARD3B (ENSVPAG00000009514) #21	ENSVPAG00000009518 #22
Arabian camel	MODERN SPECIES	31	NOP58 (ENSCDRG00005019373)	ENSCDRG00005019360	BMPR2 (ENSCDRG00005019320) #7	ENSCDRG00005019289 #8	ENSCDRG00005019283 #8	ICA1L (ENSCDRG00005019255) #10	WDR12 (ENSCDRG00005019221) #11	CARF (ENSCDRG00005019098) #12	NBEAL1 (ENSCDRG00005019031) #14	ABI2 (ENSCDRG00005018744) #16	ENSCDRG00005018577 #17	CD28 (ENSCDRG00005018484) #18	CTLA4 (ENSCDRG00005018448) #19	ICOS (ENSCDRG00005018420) #20	PARD3B (ENSCDRG00005018074) #21	NRP2 (ENSCDRG00005017938) #22	INO80D (ENSCDRG00005017847) #23	NDUFS1 (ENSCDRG00005017509) #24	EEF1B2 (ENSCDRG00005017418) #25	CMKLR2 (ENSCDRG00005017405) #26	ZDBF2 (ENSCDRG00005017378) #27	ADAM23 (ENSCDRG00005016801) #28	FAM237A (ENSCDRG00005016730) #29	DYTN (ENSCDRG00005016665) #30	MDH1B (ENSCDRG00005016545) #31	FASTKD2 (ENSCDRG00005016506) #32	CPO (ENSCDRG00005016423)	KLF7 (ENSCDRG00005016375) #34	CREB1 (ENSCDRG00005016249) #35	METTL21A (ENSCDRG00005016143) #36	ENSCDRG00005016106
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00940000153064.b.d	ENSGT01050000244818.s.a	ENSGT01090000260046	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.b ##37
Equus	ANCESTRAL SPECIES	18	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.g.b.b ##25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.b ##37	ENSGT00940000162639
Horse	MODERN SPECIES	9	NOP58 (ENSECAG00000024696)	BMPR2 (ENSECAG00000025141) #7	ENSECAG00000054476	FAM117B (ENSECAG00000004249) #8	ICA1L (ENSECAG00000009288) #10	WDR12 (ENSECAG00000009547) #11	CARF (ENSECAG00000017624) #12	NBEAL1 (ENSECAG00000020049) #14	CYP20A1 (ENSECAG00000010884) #15	ABI2 (ENSECAG00000018236) #16	ENSECAG00000022376 #17	CD28 (ENSECAG00000022853) #18	CTLA4 (ENSECAG00000003996) #19	ICOS (ENSECAG00000006253) #20	PARD3B (ENSECAG00000008768) #21	NRP2 (ENSECAG00000016824) #22	INO80D (ENSECAG00000015076) #23	NDUFS1 (ENSECAG00000015914) #24	EEF1B2 (ENSECAG00000016653) ##25	CMKLR2 (ENSECAG00000004408) #26	ZDBF2 (ENSECAG00000039959) #27	ADAM23 (ENSECAG00000018514) #28	FAM237A (ENSECAG00000050449) #29	DYTN (ENSECAG00000006820) #30	MDH1B (ENSECAG00000007491) #31	FASTKD2 (ENSECAG00000008822) #32	KLF7 (ENSECAG00000012215) #34	CREB1 (ENSECAG00000013667) #35	METTL21A (ENSECAG00000017536) #36	PLEKHM3 (ENSECAG00000008108)	FZD5 (ENSECAG00000007309)
Donkey	MODERN SPECIES	24	ENSEASG00005028104	BMPR2 (ENSEASG00005002457) #7	FAM117B (ENSEASG00005031822) #8	ICA1L (ENSEASG00005002554) #10	ENSEASG00005027147 #10	WDR12 (ENSEASG00005002567) #11	CARF (ENSEASG00005002591) #12	NBEAL1 (ENSEASG00005002684) #14	CYP20A1 (ENSEASG00005002770) #15	ABI2 (ENSEASG00005002778) #16	ENSEASG00005002800 #17	CD28 (ENSEASG00005002842) #18	CTLA4 (ENSEASG00005002849) #19	ICOS (ENSEASG00005002854) #20	PARD3B (ENSEASG00005002870) #21	NRP2 (ENSEASG00005002875) #22	INO80D (ENSEASG00005002880) #23	NDUFS1 (ENSEASG00005002883) #24	EEF1B2 (ENSEASG00005026194) ##25	CMKLR2 (ENSEASG00005002916) #26	ZDBF2 (ENSEASG00005023969) #27	ADAM23 (ENSEASG00005002928) #28	FAM237A (ENSEASG00005002935) #29	DYTN (ENSEASG00005002938) #30	MDH1B (ENSEASG00005002948) #31	FASTKD2 (ENSEASG00005002958) #32	KLF7 (ENSEASG00005002973) #34	CREB1 (ENSEASG00005002983) #35	ENSEASG00005024979 #36	CCNYL1 (ENSEASG00005003014) ##37	FZD5 (ENSEASG00005003041)
Chiroptera	ANCESTRAL SPECIES	11	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Megabat	MODERN SPECIES	152																NRP2 (ENSPVAG00000006389) #22	INO80D (ENSPVAG00000006390) #23
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.a.a #37
Greater horseshoe bat	MODERN SPECIES	26	NOP58 (ENSRFEG00010014939)	RPL39_1 (ENSRFEG00010014922)	BMPR2 (ENSRFEG00010014707) #7	FAM117B (ENSRFEG00010014554) #8	ICA1L (ENSRFEG00010014466) #10	WDR12 (ENSRFEG00010014405) #11	CARF (ENSRFEG00010013855) #12	NBEAL1 (ENSRFEG00010013724) #14	CYP20A1 (ENSRFEG00010013600) #15	ABI2 (ENSRFEG00010013372) #16	RAPH1 (ENSRFEG00010013239) #17	CD28 (ENSRFEG00010013138) #18	ENSRFEG00010013108 #19	ICOS (ENSRFEG00010013045) #20	PARD3B (ENSRFEG00010012777) #21	NRP2 (ENSRFEG00010012560) #22	INO80D (ENSRFEG00010012508) #23	NDUFS1 (ENSRFEG00010011973) #24	EEF1B2 (ENSRFEG00010011873) #25	CMKLR2 (ENSRFEG00010011856) #26	ENSRFEG00010011751 #27	ADAM23 (ENSRFEG00010010998) #28	FAM237A (ENSRFEG00010010918) #29	DYTN (ENSRFEG00010010740) #30	MDH1B (ENSRFEG00010010537) #31	FASTKD2 (ENSRFEG00010010475) #32	CPO (ENSRFEG00010010427)	KLF7 (ENSRFEG00010010310) #34	CREB1 (ENSRFEG00010020193) #35	ENSRFEG00010020167	METTL21A (ENSRFEG00010020119) #36
Microbat	MODERN SPECIES	940	WDR12 (ENSMLUG00000025847) #11	CARF (ENSMLUG00000007015) #12	NBEAL1 (ENSMLUG00000007434) #14	CYP20A1 (ENSMLUG00000014996) #15	ABI2 (ENSMLUG00000008117) #16	RAPH1 (ENSMLUG00000008162) #17	CD28 (ENSMLUG00000004329) #18	CTLA4 (ENSMLUG00000009619) #19	ICOS (ENSMLUG00000009627) #20	ENSMLUG00000024002	ENSMLUG00000025717 #21	ENSMLUG00000013841 #21	ENSMLUG00000026514	ENSMLUG00000022709 #21	ENSMLUG00000028553 #21	NRP2 (ENSMLUG00000013862) #22	INO80D (ENSMLUG00000007714) #23	NDUFS1 (ENSMLUG00000016594) #24	ENSMLUG00000016602 #25	CMKLR2 (ENSMLUG00000016607) #26	ENSMLUG00000023597	ZDBF2 (ENSMLUG00000014265) #27	ADAM23 (ENSMLUG00000009364) #28	FAM237A (ENSMLUG00000030140) #29	DYTN (ENSMLUG00000028179) #30	MDH1B (ENSMLUG00000009390) #31	FASTKD2 (ENSMLUG00000009411) #32	CPO (ENSMLUG00000009428)	KLF7 (ENSMLUG00000009436) #34	CREB1 (ENSMLUG00000016119) #35	METTL21A (ENSMLUG00000015747) #36
Carnivora	ANCESTRAL SPECIES	17	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00940000157820.a.a	ENSGT00530000063873.A #18	ENSGT01090000260046	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Felidae	ANCESTRAL SPECIES	15	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00940000157820.a.a	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.o #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Panthera	ANCESTRAL SPECIES	9	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00520000059926.a.b	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.o #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00520000059926.a.b	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.o #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
leopard	MODERN SPECIES	12							NBEAL1 (ENSPPRG00000024650) #14	CYP20A1 (ENSPPRG00000024582) #15	ABI2 (ENSPPRG00000024330) #16	ENSPPRG00000023758 #17	CD28 (ENSPPRG00000023378) #18	CTLA4 (ENSPPRG00000023337) #19	ICOS (ENSPPRG00000023149) #20	ENSPPRG00000020852	PARD3B (ENSPPRG00000001193) #21	NRP2 (ENSPPRG00000001684) #22	INO80D (ENSPPRG00000001843) #23	NDUFS1 (ENSPPRG00000003837) #24	ENSPPRG00000004175 #25	CMKLR2 (ENSPPRG00000020893) #26	ADAM23 (ENSPPRG00000004864) #28	FAM237A (ENSPPRG00000005451) #29	DYTN (ENSPPRG00000005491) #30	MDH1B (ENSPPRG00000005932) #31	FASTKD2 (ENSPPRG00000006075) #32	CPO (ENSPPRG00000006106)	KLF7 (ENSPPRG00000006377) #34	CREB1 (ENSPPRG00000006712) #35	METTL21A (ENSPPRG00000006796) #36	ENSPPRG00000007043 ##37	PLEKHM3 (ENSPPRG00000007268)
lion	MODERN SPECIES	8	NOP58 (ENSPLOG00000011950)	BMPR2 (ENSPLOG00000011747) #7	FAM117B (ENSPLOG00000011690) #8	ICA1L (ENSPLOG00000011556) #10	WDR12 (ENSPLOG00000011514) #11	CARF (ENSPLOG00000011224) #12	NBEAL1 (ENSPLOG00000010825) #14	CYP20A1 (ENSPLOG00000010756) #15	ABI2 (ENSPLOG00000010377) #16	ENSPLOG00000010151 #17	CD28 (ENSPLOG00000010049) #18	CTLA4 (ENSPLOG00000010005) #19	ICOS (ENSPLOG00000009959) #20	ENSPLOG00000009936	PARD3B (ENSPLOG00000008780) #21	NRP2 (ENSPLOG00000008415) #22	INO80D (ENSPLOG00000008354) #23	NDUFS1 (ENSPLOG00000008138) #24	ENSPLOG00000008015	ENSPLOG00000007981 #25	CMKLR2 (ENSPLOG00000007963) #26	ZDBF2 (ENSPLOG00000007898) #27	ENSPLOG00000007877	ADAM23 (ENSPLOG00000007574) #28	FAM237A (ENSPLOG00000007523) #29	DYTN (ENSPLOG00000007459) #30	MDH1B (ENSPLOG00000007375) #31	FASTKD2 (ENSPLOG00000007345) #32	CPO (ENSPLOG00000007242)	KLF7 (ENSPLOG00000007130) #34	CREB1 (ENSPLOG00000007090) #35
Tiger	MODERN SPECIES	313	BMPR2 (ENSPTIG00000013082) #7	ENSPTIG00000008227 #8	ICA1L (ENSPTIG00000013050) #10	WDR12 (ENSPTIG00000013035) #11	CARF (ENSPTIG00000012946) #12	ENSPTIG00000008218	NBEAL1 (ENSPTIG00000012887) #14	CYP20A1 (ENSPTIG00000012850) #15	ABI2 (ENSPTIG00000012734) #16	ENSPTIG00000012473 #17	CD28 (ENSPTIG00000012428) #18	CTLA4 (ENSPTIG00000012408) #19	ICOS (ENSPTIG00000012385) #20	ENSPTIG00000008211	PARD3B (ENSPTIG00000012297) #21	NRP2 (ENSPTIG00000012139) #22	INO80D (ENSPTIG00000012089) #23	NDUFS1 (ENSPTIG00000012021) #24	ENSPTIG00000011994 #25	CMKLR2 (ENSPTIG00000008203) #26	ADAM23 (ENSPTIG00000011931) #28	FAM237A (ENSPTIG00000011920) #29	DYTN (ENSPTIG00000011914) #30	MDH1B (ENSPTIG00000011902) #31	FASTKD2 (ENSPTIG00000011891) #32	CPO (ENSPTIG00000011884)	KLF7 (ENSPTIG00000011869) #34	CREB1 (ENSPTIG00000011848) #35	METTL21A (ENSPTIG00000011823) #36	ENSPTIG00000011797 ##37	PLEKHM3 (ENSPTIG00000011775)
Cat	MODERN SPECIES	239	FAM117B (ENSFCAG00000046269) #8	ICA1L (ENSFCAG00000008514) #10	WDR12 (ENSFCAG00000026676) #11	CARF (ENSFCAG00000046458) #12	NBEAL1 (ENSFCAG00000025997) #14	ENSFCAG00000027770	ENSFCAG00000048141	CYP20A1 (ENSFCAG00000022927) #15	ABI2 (ENSFCAG00000012982) #16	RAPH1 (ENSFCAG00000019050) #17	ENSFCAG00000034107	CD28 (ENSFCAG00000014271) #18	CTLA4 (ENSFCAG00000014272) #19	ICOS (ENSFCAG00000038001) #20	PARD3B (ENSFCAG00000025870) #21	NRP2 (ENSFCAG00000000423) #22	INO80D (ENSFCAG00000022035) #23	NDUFS1 (ENSFCAG00000023344) #24	EEF1B2 (ENSFCAG00000010239) #25	CMKLR2 (ENSFCAG00000028762) #26	ZDBF2 (ENSFCAG00000041779) #27	ADAM23 (ENSFCAG00000018551) #28	DYTN (ENSFCAG00000024422) #30	MDH1B (ENSFCAG00000015372) #31	FASTKD2 (ENSFCAG00000015373) #32	CPO (ENSFCAG00000002513)	KLF7 (ENSFCAG00000002514) #34	CREB1 (ENSFCAG00000008220) #35	METTL21A (ENSFCAG00000035900) #36	CCNYL1 (ENSFCAG00000028003) ##37	ENSFCAG00000039577
Caniformia	ANCESTRAL SPECIES	14	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00940000157820.a.a	ENSGT00530000063873.A #18	ENSGT01090000260046	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Canidae	ANCESTRAL SPECIES	20	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT01090000260046.e.a.a.b	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.q #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Canis_lupus	ANCESTRAL SPECIES	32	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000154694.l.b.b.a.a.b	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h.q #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Dingo	MODERN SPECIES	398	FAM117B (ENSCAFG00020002101) #8	ICA1L (ENSCAFG00020002040) #10	WDR12 (ENSCAFG00020001958) #11	CARF (ENSCAFG00020001932) #12	ENSCAFG00020001912	NBEAL1 (ENSCAFG00020001831) #14	CYP20A1 (ENSCAFG00020001812) #15	ENSCAFG00020001801	ENSCAFG00020001784	ABI2 (ENSCAFG00020001752) #16	RAPH1 (ENSCAFG00020001630) #17	CD28 (ENSCAFG00020001531) #18	CTLA4 (ENSCAFG00020001506) #19	ICOS (ENSCAFG00020001489) #20	PARD3B (ENSCAFG00020001089) #21	NRP2 (ENSCAFG00020000746) #22	INO80D (ENSCAFG00020000661) #23	NDUFS1 (ENSCAFG00020000642) #24	EEF1B2 (ENSCAFG00020000617) #25	CMKLR2 (ENSCAFG00020000614) #26	ZDBF2 (ENSCAFG00020000545) #27	ADAM23 (ENSCAFG00020000240) #28	FAM237A (ENSCAFG00020000156) #29	DYTN (ENSCAFG00020027434) #30	MDH1B (ENSCAFG00020027429) #31	FASTKD2 (ENSCAFG00020027426) #32	CPO (ENSCAFG00020027425)	KLF7 (ENSCAFG00020027423) #34	CREB1 (ENSCAFG00020027420) #35	METTL21A (ENSCAFG00020027418) #36	ENSCAFG00020027415 ##37
Dog	MODERN SPECIES	30	WDR12 (ENSCAFG00845015685) #11	CARF (ENSCAFG00845015868) #12	ENSCAFG00845016161	NBEAL1 (ENSCAFG00845016248) #14	CYP20A1 (ENSCAFG00845016438) #15	ENSCAFG00845016541	ABI2 (ENSCAFG00845016661) #16	ENSCAFG00845016782	ENSCAFG00845016818	RAPH1 (ENSCAFG00845017225) #17	ENSCAFG00845017896	CD28 (ENSCAFG00845018097) #18	CTLA4 (ENSCAFG00845018252) #19	ICOS (ENSCAFG00845018403) #20	PARD3B (ENSCAFG00845018916) #21	NRP2 (ENSCAFG00845019968) #22	INO80D (ENSCAFG00845020375) #23	NDUFS1 (ENSCAFG00845020511) #24	EEF1B2 (ENSCAFG00845020822) #25	GPR1 (ENSCAFG00845020895) #26	ZDBF2 (ENSCAFG00845020911) #27	ADAM23 (ENSCAFG00845021040) #28	FAM237A (ENSCAFG00845021430) #29	DYTN (ENSCAFG00845021457) #30	MDH1B (ENSCAFG00845021551) #31	FASTKD2 (ENSCAFG00845021685) #32	CPO (ENSCAFG00845021788)	KLF7 (ENSCAFG00845021900) #34	CREB1 (ENSCAFG00845022020) #35	METTL21A (ENSCAFG00845022171) #36	CCNYL1 (ENSCAFG00845022326) ##37
Red fox	MODERN SPECIES	41	ICA1L (ENSVVUG00000018171) #10	WDR12 (ENSVVUG00000018074) #11	CARF (ENSVVUG00000017926) #12	ENSVVUG00000017885 #14	NBEAL1 (ENSVVUG00000017646) #14	CYP20A1 (ENSVVUG00000017336) #15	ENSVVUG00000017318	ENSVVUG00000017315	ABI2 (ENSVVUG00000017312) #16	RAPH1 (ENSVVUG00000017063) #17	CD28 (ENSVVUG00000017013) #18	ENSVVUG00000017012	CTLA4 (ENSVVUG00000017009) #19	ICOS (ENSVVUG00000017004) #20	PARD3B (ENSVVUG00000016975) #21	NRP2 (ENSVVUG00000016946) #22	INO80D (ENSVVUG00000016931) #23	NDUFS1 (ENSVVUG00000016918) #24	EEF1B2 (ENSVVUG00000016896) #25	GPR1 (ENSVVUG00000016890) #26	ZDBF2 (ENSVVUG00000016880) #27
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00940000157820.a.a	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Mustelinae	ANCESTRAL SPECIES	44	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Ferret	MODERN SPECIES	265	FAM117B (ENSMPUG00000000358) #8	ICA1L (ENSMPUG00000000375) #10	WDR12 (ENSMPUG00000000379) #11	CARF (ENSMPUG00000000382) #12	NBEAL1 (ENSMPUG00000000385) #14	ENSMPUG00000000395 #15	ENSMPUG00000000397 #15	ABI2 (ENSMPUG00000000402) #16	RAPH1 (ENSMPUG00000000405) #17	CD28 (ENSMPUG00000000418) #18	CTLA4 (ENSMPUG00000000422) #19	ICOS (ENSMPUG00000000425) #20	ENSMPUG00000000428	ENSMPUG00000000430 ##21	PARD3B (ENSMPUG00000000432) #21	NRP2 (ENSMPUG00000000435) #22	ENSMPUG00000000437	INO80D (ENSMPUG00000000439) #23	NDUFS1 (ENSMPUG00000000442) #24	EEF1B2 (ENSMPUG00000000444) #25	CMKLR2 (ENSMPUG00000018909) #26	ZDBF2 (ENSMPUG00000000463) #27	ADAM23 (ENSMPUG00000000467) #28	ENSMPUG00000000471	MDH1B (ENSMPUG00000000473) #31	FASTKD2 (ENSMPUG00000000477) #32	CPO (ENSMPUG00000000481)	KLF7 (ENSMPUG00000000483) #34	CREB1 (ENSMPUG00000000485) #35	ENSMPUG00000018911	ENSMPUG00000000487 #36
American mink	MODERN SPECIES	40	BMPR2 (ENSNVIG00000007469) #7	ENSNVIG00000007447 #8	ENSNVIG00000007441 #8	ICA1L (ENSNVIG00000007376) #10	WDR12 (ENSNVIG00000007326) #11	F6SXV3 (ENSNVIG00000007220) #12	NBEAL1 (ENSNVIG00000007140) #14	CYP20A1 (ENSNVIG00000007093) #15	ABI2 (ENSNVIG00000006920) #16	RAPH1 (ENSNVIG00000006475) #17	ENSNVIG00000006462	CD28 (ENSNVIG00000006426) #18	CTLA4 (ENSNVIG00000006392) #19	ICOS (ENSNVIG00000006380) #20	PARD3B (ENSNVIG00000005889) #21	NRP2 (ENSNVIG00000005651) #22	INO80D (ENSNVIG00000005634) #23	NDUFS1 (ENSNVIG00000005404) #24	EEF1B2 (ENSNVIG00000005362) #25	GPR1 (ENSNVIG00000005355) #26	ZDBF2 (ENSNVIG00000005326) #27	ADAM23 (ENSNVIG00000005209) #28	FAM237A (ENSNVIG00000005198) #29	DYTN (ENSNVIG00000005190) #30	MDH1B (ENSNVIG00000005145) #31	FASTKD2 (ENSNVIG00000005116) #32	CBPO (ENSNVIG00000005106)	KLF7 (ENSNVIG00000005091) #34	CREB1 (ENSNVIG00000005058) #35	METTL21A (ENSNVIG00000005027) #36	ENSNVIG00000005020
Ursidae	ANCESTRAL SPECIES	7	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00940000157820.a.a.k	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37
Giant Panda	MODERN SPECIES	11	BMPR2 (ENSAMEG00000013148) #7	ENSAMEG00000013132 #8	ENSAMEG00000026389 #8	ICA1L (ENSAMEG00000013120) #10	WDR12 (ENSAMEG00000013091) #11	CARF (ENSAMEG00000013068) #12	NBEAL1 (ENSAMEG00000013020) #14	ABI2 (ENSAMEG00000012960) #16	ENSAMEG00000002970 #17	ENSAMEG00000030945	ENSAMEG00000028551	CD28 (ENSAMEG00000002955) #18	CTLA4 (ENSAMEG00000002942) #19	ICOS (ENSAMEG00000002936) #20	PARD3B (ENSAMEG00000002930) #21	NRP2 (ENSAMEG00000003086) #22	INO80D (ENSAMEG00000003072) #23	NDUFS1 (ENSAMEG00000003030) #24	ENSAMEG00000003015 #25	ZDBF2 (ENSAMEG00000029468) #27	CMKLR2 (ENSAMEG00000003011) #26	ADAM23 (ENSAMEG00000002950) #28	FAM237A (ENSAMEG00000029073) #29	DYTN (ENSAMEG00000025472) #30	MDH1B (ENSAMEG00000002932) #31	FASTKD2 (ENSAMEG00000002917) #32	CPO (ENSAMEG00000015096)	KLF7 (ENSAMEG00000015148) #34	CREB1 (ENSAMEG00000015152) #35	METTL21A (ENSAMEG00000015168) #36	ENSAMEG00000015175 ##37
Ursus	ANCESTRAL SPECIES	4	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00940000157820.a.a.k	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00910000148124	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36
Polar bear	MODERN SPECIES	142	ENSUMAG00000021893 #8	ENSUMAG00000021898 #8	ICA1L (ENSUMAG00000021899) #10	WDR12 (ENSUMAG00000021904) #11	CARF (ENSUMAG00000021907) #12	ENSUMAG00000021909 #14	NBEAL1 (ENSUMAG00000021925) #14	CYP20A1 (ENSUMAG00000022062) #15	ABI2 (ENSUMAG00000022146) #16	RAPH1 (ENSUMAG00000022157) #17	ENSUMAG00000022213	CD28 (ENSUMAG00000022222) #18	CTLA4 (ENSUMAG00000022223) #19	ICOS (ENSUMAG00000022228) #20	PARD3B (ENSUMAG00000022273) #21	NRP2 (ENSUMAG00000022446) #22	ENSUMAG00000022452	INO80D (ENSUMAG00000022462) #23	NDUFS1 (ENSUMAG00000022473) #24	EEF1B2 (ENSUMAG00000022481) #25	ZDBF2 (ENSUMAG00000022505) #27	ADAM23 (ENSUMAG00000022533) #28	FAM237A (ENSUMAG00000022571) #29	DYTN (ENSUMAG00000022576) #30	MDH1B (ENSUMAG00000022585) #31	FASTKD2 (ENSUMAG00000022590) #32	CPO (ENSUMAG00000022606)	KLF7 (ENSUMAG00000022629) #34	METTL21A (ENSUMAG00000022649) #36	CREB1 (ENSUMAG00000022656) #35	ENSUMAG00000022665 ##37
American black bear	DUPLICATION
American black bear	MODERN SPECIES	3124															ENSUAMG00000016631	NRP2 (ENSUAMG00000016625) #22
American black bear	MODERN SPECIES	6049																ENSUAMG00000012305 #22
Atlantogenata	ANCESTRAL SPECIES	9	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37	ENSGT00940000154453.b.a.b ##37
Afrotheria	ANCESTRAL SPECIES	1	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37	ENSGT00940000162639
Afrotheria_a	ANCESTRAL SPECIES	1	ENSGT00940000154319.v	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a.h #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.b ##37	ENSGT00940000162639
Elephant	MODERN SPECIES	301	ENSLAFG00000020653 #14	ENSLAFG00000015098 #14	CYP20A1 (ENSLAFG00000015110) #15	ABI2 (ENSLAFG00000015117) #16	ENSLAFG00000015135 #17	ENSLAFG00000031357	CD28 (ENSLAFG00000017773) #18	CTLA4 (ENSLAFG00000006654) #19	ICOS (ENSLAFG00000006657) #20	ENSLAFG00000026263	ENSLAFG00000030813 #21	ENSLAFG00000007708 #21	ENSLAFG00000026835 #21	ENSLAFG00000025673 #21	ENSLAFG00000030808 #21	NRP2 (ENSLAFG00000016414) #22	INO80D (ENSLAFG00000015352) #23	NDUFS1 (ENSLAFG00000013782) #24	EEF1B2 (ENSLAFG00000011812) #25	CMKLR2 (ENSLAFG00000009005) #26	ZDBF2 (ENSLAFG00000014253) #27	ADAM23 (ENSLAFG00000014452) #28	DYTN (ENSLAFG00000032161) #30	MDH1B (ENSLAFG00000015578) #31	FASTKD2 (ENSLAFG00000005198) #32	CPO (ENSLAFG00000009772)	KLF7 (ENSLAFG00000005822) #34	CREB1 (ENSLAFG00000013257) #35	METTL21A (ENSLAFG00000017103) #36	ENSLAFG00000021558 ##37	FZD5 (ENSLAFG00000017105)
Hyrax	MODERN SPECIES	1502																NRP2 (ENSPCAG00000005335) #22
Tenrec	MODERN SPECIES	1860																NRP2 (ENSETEG00000008308) #22
Xenarthra	ANCESTRAL SPECIES	686										ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22
Armadillo	MODERN SPECIES	1677															ENSDNOG00000036872 #21	NRP2 (ENSDNOG00000033847) #22
Sloth	MODERN SPECIES	1678																NRP2 (ENSCHOG00000012420) #22
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000155877	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37
Opossum	MODERN SPECIES	6	ICA1L (ENSMODG00000016279) #10	WDR12 (ENSMODG00000016275) #11	CARF (ENSMODG00000016272) #12	ENSMODG00000047566	NBEAL1 (ENSMODG00000016268) #14	ENSMODG00000037522	CYP20A1 (ENSMODG00000016255) #15	ABI2 (ENSMODG00000016244) #16	ENSMODG00000016237 #17	CD28 (ENSMODG00000016234) #18	CTLA4 (ENSMODG00000016230) #19	ENSMODG00000025487 #20	ENSMODG00000024816	ENSMODG00000024817	PARD3B (ENSMODG00000016213) #21	NRP2 (ENSMODG00000016052) #22	ENSMODG00000016028	INO80D (ENSMODG00000016027) #23	NDUFS1 (ENSMODG00000016019) #24	EEF1B2 (ENSMODG00000016012) #25	GPR1 (ENSMODG00000046264) #26	ADAM23 (ENSMODG00000016005) #28	FAM237A (ENSMODG00000027693) #29	ENSMODG00000016001 #31	FASTKD2 (ENSMODG00000015997) #32	CPO (ENSMODG00000015987)	KLF7 (ENSMODG00000015982) #34	CREB1 (ENSMODG00000015970) #35	METTL21A (ENSMODG00000015959) #36	ENSMODG00000015954 #37	FZD5 (ENSMODG00000015949)
Marsupialia_b	DUPLICATION
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270.c #22	ENSGT00940000155877	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37
Diprotodontia	ANCESTRAL SPECIES	31	ENSGT00940000153534.A.a	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270.c #22	ENSGT00940000155877	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37
Diprotodontia_a	ANCESTRAL SPECIES	30	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT01030000234979.a	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270.c #22	ENSGT00940000155877	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37
koala	MODERN SPECIES	231	FAM117B (ENSPCIG00000008837) #8	ICA1L (ENSPCIG00000008836) #10	WDR12 (ENSPCIG00000008835) #11	CARF (ENSPCIG00000008833) #12	NBEAL1 (ENSPCIG00000022908) #14	ENSPCIG00000022906	CYP20A1 (ENSPCIG00000022811) #15	ABI2 (ENSPCIG00000015338) #16	ENSPCIG00000015308 #17	ENSPCIG00000015292	CD28 (ENSPCIG00000015286) #18	CTLA4 (ENSPCIG00000015278) #19	ENSPCIG00000015275 #20	PARD3B (ENSPCIG00000006317) #21	ENSPCIG00000006319	NRP2 (ENSPCIG00000006323) #22	ENSPCIG00000006327	INO80D (ENSPCIG00000006328) #23	NDUFS1 (ENSPCIG00000009914) #24	ENSPCIG00000009878 #25	CMKLR2 (ENSPCIG00000015684) #26
Common wonbat	MODERN SPECIES	1038	ICA1L (ENSVURG00010005759) #10	WDR12 (ENSVURG00010005744) #11	CARF (ENSVURG00010005670) #12	NBEAL1 (ENSVURG00010005633) #14	ENSVURG00010005614	CYP20A1 (ENSVURG00010005594) #15	ABI2 (ENSVURG00010005572) #16	RAPH1 (ENSVURG00010005515) #17	ENSVURG00010005495	ENSVURG00010005489	CD28 (ENSVURG00010005486) #18	CTLA4 (ENSVURG00010005475) #19	ENSVURG00010005458 #20	ENSVURG00010005443	PARD3B (ENSVURG00010005402) #21	NRP2 (ENSVURG00010005142) #22	ENSVURG00010005096	INO80D (ENSVURG00010005077) #23	NDUFS1 (ENSVURG00010005021) #24	ENSVURG00010004989 #25	CMKLR2 (ENSVURG00010004980) #26	ENSVURG00010004970	ENSVURG00010004965 #27	FAM237A (ENSVURG00010004897) #29	MDH1B (ENSVURG00010004893) #31	FASTKD2 (ENSVURG00010004867) #32	CPO (ENSVURG00010004833)	ENSVURG00010004815	KLF7 (ENSVURG00010004801) #34	CREB1 (ENSVURG00010004759) #35	METTL21A (ENSVURG00010004735) #36
Wallaby	MODERN SPECIES	2706																NRP2 (ENSMEUG00000015331) #22
Tasmanian devil	MODERN SPECIES	2	FAM117B (ENSSHAG00000008247) #8	ICA1L (ENSSHAG00000007656) #10	WDR12 (ENSSHAG00000006960) #11	CARF (ENSSHAG00000006210) #12	NBEAL1 (ENSSHAG00000000284) #14	ENSSHAG00000021267	CYP20A1 (ENSSHAG00000028734) #15	ABI2 (ENSSHAG00000008450) #16	ENSSHAG00000007679 #17	CD28 (ENSSHAG00000028743) #18	CTLA4 (ENSSHAG00000016177) #19	ENSSHAG00000015832 #20	ENSSHAG00000024535	PARD3B (ENSSHAG00000001616) #21	ENSSHAG00000024159 #22	ENSSHAG00000018322 #22	ENSSHAG00000026001	INO80D (ENSSHAG00000029318) #23	NDUFS1 (ENSSHAG00000017865) #24	EEF1B2 (ENSSHAG00000017853) #25	CMKLR2 (ENSSHAG00000021936) #26	ENSSHAG00000028209 #27	ADAM23 (ENSSHAG00000017245) #28	FAM237A (ENSSHAG00000017064) #29	MDH1B (ENSSHAG00000016820) #31	ENSSHAG00000016740 #32	ENSSHAG00000022521	CPO (ENSSHAG00000026232)	KLF7 (ENSSHAG00000015861) #34	CREB1 (ENSSHAG00000013905) #35	METTL21A (ENSSHAG00000013828) #36
Marsupialia_b	ANCESTRAL SPECIES																	ENSGT00940000155270.d #22
Tasmanian devil	MODERN SPECIES	2	BMPR2 (ENSSHAG00000009795) #7	FAM117B (ENSSHAG00000008247) #8	ICA1L (ENSSHAG00000007656) #10	WDR12 (ENSSHAG00000006960) #11	CARF (ENSSHAG00000006210) #12	NBEAL1 (ENSSHAG00000000284) #14	ENSSHAG00000021267	CYP20A1 (ENSSHAG00000028734) #15	ABI2 (ENSSHAG00000008450) #16	ENSSHAG00000007679 #17	CD28 (ENSSHAG00000028743) #18	CTLA4 (ENSSHAG00000016177) #19	ENSSHAG00000015832 #20	ENSSHAG00000024535	PARD3B (ENSSHAG00000001616) #21	ENSSHAG00000024159 #22	ENSSHAG00000018322 #22	ENSSHAG00000026001	INO80D (ENSSHAG00000029318) #23	NDUFS1 (ENSSHAG00000017865) #24	EEF1B2 (ENSSHAG00000017853) #25	CMKLR2 (ENSSHAG00000021936) #26	ENSSHAG00000028209 #27	ADAM23 (ENSSHAG00000017245) #28	FAM237A (ENSSHAG00000017064) #29	MDH1B (ENSSHAG00000016820) #31	ENSSHAG00000016740 #32	ENSSHAG00000022521	CPO (ENSSHAG00000026232)	KLF7 (ENSSHAG00000015861) #34	CREB1 (ENSSHAG00000013905) #35
Platypus	MODERN SPECIES	18	ICA1L (ENSOANG00000011099) #10	WDR12 (ENSOANG00000011097) #11	CARF (ENSOANG00000011095) #12	NBEAL1 (ENSOANG00000011085) #14	ENSOANG00000009001	CYP20A1 (ENSOANG00000015019) #15	ABI2 (ENSOANG00000001380) #16	ENSOANG00000006769 #17	ENSOANG00000048576	CD28 (ENSOANG00000040633) #18	CTLA4 (ENSOANG00000010895) #19	ENSOANG00000007435 #20	ENSOANG00000041151	PARD3B (ENSOANG00000014041) #21	ENSOANG00000044745 #21	NRP2 (ENSOANG00000012962) #22	ENSOANG00000038688	INO80D (ENSOANG00000012965) #23	NDUFS1 (ENSOANG00000002321) #24	EEF1B2 (ENSOANG00000012964) #25	CMKLR2 (ENSOANG00000012797) #26	ADAM23 (ENSOANG00000000660) #28	FAM237A (ENSOANG00000045785) #29	MDH1B (ENSOANG00000000659) #31	ENSOANG00000020472 #32	KLF7 (ENSOANG00000047076) #34	TIMM17A (ENSOANG00000043200)	LMOD1 (ENSOANG00000041996)	SHISA4 (ENSOANG00000009360)	IPO9 (ENSOANG00000009358)	ENSOANG00000009356
Sauria	ANCESTRAL SPECIES	32	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00390000003964.b	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37
Lepidosauria	ANCESTRAL SPECIES	7	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00390000003964.b	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37	ENSGT00940000161191.B
Episquamata	ANCESTRAL SPECIES		ENSGT00940000154319	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37	ENSGT00940000161191.B	ENSGT00940000159743
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00930000150950.b #11	ENSGT00950000185065	ENSGT00390000003964.b	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000012547.b
Elapidae	ANCESTRAL SPECIES		ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00930000150950.b #11	ENSGT00950000185065	ENSGT00390000003964.b	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089.g #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00960000187202	ENSGT00390000012547.b
Elapidae_a	ANCESTRAL SPECIES	39															ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00960000187202	ENSGT00390000012547.b
Acanthophiinae	ANCESTRAL SPECIES	39															ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00960000187202	ENSGT00390000012547.b
Mainland tiger snake	MODERN SPECIES	50														ENSNSUG00000005042	PARD3B (ENSNSUG00000005020) #21	NRP2 (ENSNSUG00000005004) #22	INO80D (ENSNSUG00000004988) #23	NDUFS1 (ENSNSUG00000004982) #24	EEF1B2 (ENSNSUG00000004974) #25	CMKLR2 (ENSNSUG00000004973) #26	ADAM23 (ENSNSUG00000004968) #28	MDH1B (ENSNSUG00000004966) #31	FASTKD2 (ENSNSUG00000004850) #32	KLF7 (ENSNSUG00000004849) #34	CREB1 (ENSNSUG00000004838) #35	METTL21A (ENSNSUG00000004836) #36	ENSNSUG00000004835 #37	ENSNSUG00000004833	ENSNSUG00000004832	PLEKHM3 (ENSNSUG00000004824)	ENSNSUG00000004822
Eastern brown snake	MODERN SPECIES	36													ENSPTXG00000008221	ENSPTXG00000008219	PARD3B (ENSPTXG00000008179) #21	NRP2 (ENSPTXG00000008167) #22	INO80D (ENSPTXG00000008163) #23	NDUFS1 (ENSPTXG00000008161) #24	EEF1B2 (ENSPTXG00000008156) #25	CMKLR2 (ENSPTXG00000008154) #26	ADAM23 (ENSPTXG00000008147) #28	MDH1B (ENSPTXG00000008146) #31	FASTKD2 (ENSPTXG00000008144) #32	KLF7 (ENSPTXG00000008140) #34	CREB1 (ENSPTXG00000008139) #35	METTL21A (ENSPTXG00000008138) #36	ENSPTXG00000008137 #37	ENSPTXG00000008136	PLEKHM3 (ENSPTXG00000008135)	IDH1 (ENSPTXG00000008132)	PIKFYVE (ENSPTXG00000007358)
Indian cobra	MODERN SPECIES		NOP58 (ENSNNAG00000008788)	BMPR2 (ENSNNAG00000008749) #7	FAM117B (ENSNNAG00000008713) #8	WDR12 (ENSNNAG00000008654) #11	ENSNNAG00000008600	NBEAL1 (ENSNNAG00000008400) #14	ENSNNAG00000008350	CYP20A1 (ENSNNAG00000008325) #15	ABI2 (ENSNNAG00000008284) #16	RAPH1 (ENSNNAG00000007996) #17	CD28 (ENSNNAG00000007953) #18	CTLA4 (ENSNNAG00000007939) #19	ICOS (ENSNNAG00000007918) #20	ENSNNAG00000007910	PARD3B (ENSNNAG00000007817) #21	NRP2 (ENSNNAG00000007682) #22	INO80D (ENSNNAG00000007613) #23	NDUFS1 (ENSNNAG00000007093) #24	EEF1B2 (ENSNNAG00000006992) #25	CMKLR2 (ENSNNAG00000006981) #26	ADAM23 (ENSNNAG00000006219) #28	MDH1B (ENSNNAG00000006119) #31	FASTKD2 (ENSNNAG00000006083) #32	KLF7 (ENSNNAG00000006050) #34	CREB1 (ENSNNAG00000006029) #35	METTL21A (ENSNNAG00000005999) #36	ENSNNAG00000005945 #37	ENSNNAG00000005932	PLEKHM3 (ENSNNAG00000005905)	ENSNNAG00000005842	ENSNNAG00000005828
Lizard	MODERN SPECIES	822	FAM117B (ENSACAG00000004859) #8	WDR12 (ENSACAG00000004774) #11	ENSACAG00000004755	ENSACAG00000043702	ENSACAG00000037627	NBEAL1 (ENSACAG00000004721) #14	ENSACAG00000004658	CYP20A1 (ENSACAG00000004604) #15	ENSACAG00000045333	ABI2 (ENSACAG00000004539) #16	RAPH1 (ENSACAG00000004500) #17	CD28 (ENSACAG00000004486) #18	ENSACAG00000028063 #19	ENSACAG00000037252	PARD3B (ENSACAG00000004428) #21	NRP2 (ENSACAG00000004128) #22	INO80D (ENSACAG00000004095) #23	NDUFS1 (ENSACAG00000001471) #24	CMKLR2 (ENSACAG00000001415) #26	EEF1B2 (ENSACAG00000001423) #25	ADAM23 (ENSACAG00000009477) #28	ENSACAG00000028631 #30	MDH1B (ENSACAG00000009563) #31	FASTKD2 (ENSACAG00000009610) #32	KLF7 (ENSACAG00000009642) #34
Laterata	ANCESTRAL SPECIES	42	ENSGT00940000158239.b	ENSGT00950000183314	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37	ENSGT00940000161191.B	ENSGT00940000159743
Argentine black and white tegu	MODERN SPECIES	12	KIAA2012 (ENSSMRG00000020790)	SUMO1 (ENSSMRG00000020789)	NOP58 (ENSSMRG00000020786)	BMPR2 (ENSSMRG00000020784) #7	FAM117B (ENSSMRG00000020783) #8	WDR12 (ENSSMRG00000020782) #11	ENSSMRG00000020781	NBEAL1 (ENSSMRG00000020780) #14	ENSSMRG00000020779	CYP20A1 (ENSSMRG00000020778) #15	ABI2 (ENSSMRG00000020777) #16	RAPH1 (ENSSMRG00000020776) #17	ENSSMRG00000020658	CTLA4 (ENSSMRG00000020651) #19	PARD3B (ENSSMRG00000020645) #21	NRP2 (ENSSMRG00000020640) #22	INO80D (ENSSMRG00000020639) #23	NDUFS1 (ENSSMRG00000020638) #24	EEF1B2 (ENSSMRG00000020633) #25	CMKLR2 (ENSSMRG00000020632) #26	ADAM23 (ENSSMRG00000020333) #28	FAM237A (ENSSMRG00000020332) #29	MDH1B (ENSSMRG00000020330) #31	FASTKD2 (ENSSMRG00000020328) #32	KLF7 (ENSSMRG00000020327) #34	CREB1 (ENSSMRG00000020325) #35	METTL21A (ENSSMRG00000020324) #36	ENSSMRG00000020322 #37	ENSSMRG00000020321	PLEKHM3 (ENSSMRG00000020318)	C2orf80 (ENSSMRG00000020315)
Common wall lizard	MODERN SPECIES		ENSPMRG00000006832	ENSPMRG00000006842 ##10	WDR12 (ENSPMRG00000006856) #11	ENSPMRG00000006909	CARF (ENSPMRG00000006921) #12	ENSPMRG00000006930	NBEAL1 (ENSPMRG00000007358) #14	CYP20A1 (ENSPMRG00000008728) #15	ABI2 (ENSPMRG00000008747) #16	RAPH1 (ENSPMRG00000008789) #17	CD28 (ENSPMRG00000008873) #18	CTLA4 (ENSPMRG00000008883) #19	PARD3B (ENSPMRG00000008900) #21	ENSPMRG00000008928	ENSPMRG00000008932	NRP2 (ENSPMRG00000008950) #22	INO80D (ENSPMRG00000009029) #23	EEF1B2 (ENSPMRG00000009046) #25	NDUFS1 (ENSPMRG00000009096) #24	ADAM23 (ENSPMRG00000009258) #28	FAM237A (ENSPMRG00000009266) #29	DYTN (ENSPMRG00000000114) #30	ENSPMRG00000000134 #31	ENSPMRG00000000143 #31	FASTKD2 (ENSPMRG00000000149) #32	KLF7 (ENSPMRG00000000188) #34	CREB1 (ENSPMRG00000000233) #35	METTL21A (ENSPMRG00000000269) #36	ENSPMRG00000000296	ENSPMRG00000000317 #37	ENSPMRG00000000354
tuatara	MODERN SPECIES	1738														ENSSPUG00000018429 #20	PARD3B (ENSSPUG00000018394) #21	NRP2 (ENSSPUG00000018362) #22
Archelosauria	ANCESTRAL SPECIES	8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00390000003964.b	ENSGT00950000185065	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00970000193449	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36
Cryptodira	ANCESTRAL SPECIES	5	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00950000185065	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00970000193449	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36
Testudinoidea	ANCESTRAL SPECIES	11	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00950000185065	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00970000193449	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36
Emydidae	ANCESTRAL SPECIES	4	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00950000185065	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00970000193449	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37
painted turtle	MODERN SPECIES	805												ENSCPBG00000015084	STK32A (ENSCPBG00000018970)	ENSCPBG00000019076	ENSCPBG00000019086 #21	NRP2 (ENSCPBG00000019110) #22	INO80D (ENSCPBG00000019181) #23	NDUFS1 (ENSCPBG00000019234) #24	EEF1B2 (ENSCPBG00000019285) #25	ENSCPBG00000019321	CMKLR2 (ENSCPBG00000019397) #26	ADAM23 (ENSCPBG00000019586) #28	FAM237A (ENSCPBG00000020040) #29	DYTN (ENSCPBG00000020053) #30	MDH1B (ENSCPBG00000020070) #31	FASTKD2 (ENSCPBG00000020108) #32	CPO (ENSCPBG00000020174)	KLF7 (ENSCPBG00000020188) #34	CREB1 (ENSCPBG00000020191) #35	METTL21A (ENSCPBG00000020196) #36	ENSCPBG00000020210 #37
Three-toed box turtle	MODERN SPECIES	25	NOP58 (ENSTMTG00000010944)	BMPR2 (ENSTMTG00000011025) #7	FAM117B (ENSTMTG00000011056) #8	ICA1L (ENSTMTG00000011077) #10	WDR12 (ENSTMTG00000011113) #11	CARF (ENSTMTG00000011136) #12	ENSTMTG00000011258	NBEAL1 (ENSTMTG00000011535) #14	ENSTMTG00000000064	ABI2 (ENSTMTG00000000124) #16	RAPH1 (ENSTMTG00000000330) #17	CD28 (ENSTMTG00000000707) #18	CTLA4 (ENSTMTG00000000717) #19	ICOS (ENSTMTG00000000728) #20	PARD3B (ENSTMTG00000000749) #21	NRP2 (ENSTMTG00000000762) #22	INO80D (ENSTMTG00000000797) #23	NDUFS1 (ENSTMTG00000000828) #24	EEF1B2 (ENSTMTG00000000857) #25	CMKLR2 (ENSTMTG00000000886) #26	ADAM23 (ENSTMTG00000000910) #28	FAM237A (ENSTMTG00000000963) #29	DYTN (ENSTMTG00000000982) #30	MDH1B (ENSTMTG00000001002) #31	FASTKD2 (ENSTMTG00000001072) #32	CPO (ENSTMTG00000001098)	KLF7 (ENSTMTG00000001122) #34	CREB1 (ENSTMTG00000001136) #35	METTL21A (ENSTMTG00000001153) #36	ENSTMTG00000001162 #37	ENSTMTG00000001184
Testudinidae	ANCESTRAL SPECIES	8	ENSGT00390000005530.a.a #10	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00950000185065	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000176171	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00970000193449	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36
Goode s thornscrub tortoise	MODERN SPECIES	2	ICA1L (ENSGEVG00005011235) #10	WDR12 (ENSGEVG00005011195) #11	CARF (ENSGEVG00005011158) #12	ENSGEVG00005011079	NBEAL1 (ENSGEVG00005007841) #14	ENSGEVG00005007312	CYP20A1 (ENSGEVG00005007271) #15	ENSGEVG00005007253	ABI2 (ENSGEVG00005007221) #16	RAPH1 (ENSGEVG00005007171) #17	CD28 (ENSGEVG00005007000) #18	CTLA4 (ENSGEVG00005006968) #19	ICOS (ENSGEVG00005006946) #20	PARD3B (ENSGEVG00005006583) #21	ENSGEVG00005006463	NRP2 (ENSGEVG00005006393) #22	INO80D (ENSGEVG00005006347) #23	NDUFS1 (ENSGEVG00005006314) #24	EEF1B2 (ENSGEVG00005006284) #25	CMKLR2 (ENSGEVG00005006269) #26	ENSGEVG00005006255 #27	ADAM23 (ENSGEVG00005006163) #28	FAM237A (ENSGEVG00005006142) #29	DYTN (ENSGEVG00005006111) #30	MDH1B (ENSGEVG00005006096) #31	FASTKD2 (ENSGEVG00005006068) #32	CPO (ENSGEVG00005005978)	KLF7 (ENSGEVG00005005958) #34	CREB1 (ENSGEVG00005005883) #35	METTL21A (ENSGEVG00005005862) #36	ENSGEVG00005005842 #37
Abingdon island giant tortoise	MODERN SPECIES	668															ENSCABG00000003073 #21	NRP2 (ENSCABG00000003082) #22	INO80D (ENSCABG00000003095) #23	NDUFS1 (ENSCABG00000003121) #24	EEF1B2 (ENSCABG00000003323) #25	ENSCABG00000003325	CMKLR2 (ENSCABG00000003336) #26
Chinese turtle	MODERN SPECIES	677	ENSPSIG00000018140	ENSPSIG00000018142	ENSPSIG00000003550	ENSPSIG00000003565	ENSPSIG00000003574	BZW1 (ENSPSIG00000003613)	CLK1 (ENSPSIG00000003762)	PPIL3 (ENSPSIG00000003967)	NIF3L1 (ENSPSIG00000004085)	ORC2 (ENSPSIG00000004159)	HYCC2 (ENSPSIG00000004753)	NDUFB3 (ENSPSIG00000004805)	CFLAR (ENSPSIG00000004865)	ENSPSIG00000001200	PARD3B (ENSPSIG00000004999) #21	NRP2 (ENSPSIG00000005456) #22
Archosauria	ANCESTRAL SPECIES	6	ENSGT00940000153534.A	ENSGT00940000156449 #7	ENSGT00950000183046.a.a #8	ENSGT00930000150950.b #11	ENSGT00390000013916 #12	ENSGT00950000185065	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00970000193449	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36
Aves	ANCESTRAL SPECIES	8	ENSGT00940000177631	ENSGT00390000012547.b	ENSGT00940000154107.b.j.b	ENSGT00390000004840	ENSGT00940000159232	ENSGT00940000163494.a.b.g.b	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00970000193449	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36
Neognathae	ANCESTRAL SPECIES	6	ENSGT00940000156307.b	ENSGT00940000177631	ENSGT00390000012547.b	ENSGT00940000154107.b.j.b	ENSGT00390000004840	ENSGT00940000163494.a.b.g.b	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00970000193449	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00940000155558	ENSGT00940000156307.b	ENSGT00390000012547.b	ENSGT00940000154107.b.j.b	ENSGT00390000004840	ENSGT00940000163494.a.b.g.b	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408.b #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.d #37
Anatidae	ANCESTRAL SPECIES	10	ENSGT00940000155558	ENSGT00940000156307.b	ENSGT00390000012547.b	ENSGT00940000154107.b.j.b	ENSGT00390000004840	ENSGT00940000163494.a.b.g.b	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408.b #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.d #37	ENSGT00940000161191.B	ENSGT00940000159743
Duck	MODERN SPECIES	25	IDH1 (ENSAPLG00000014810)	ENSAPLG00000015011	ENSAPLG00000018471	ENSAPLG00000024504	ENSAPLG00000017302 #14	ENSAPLG00000027901 #14	ENSAPLG00000025723	ENSAPLG00000025132	CYP20A1 (ENSAPLG00000015942) #15	ABI2 (ENSAPLG00000016216) #16	RAPH1 (ENSAPLG00000000860) #17	CD28 (ENSAPLG00000001723) #18	CTLA4 (ENSAPLG00000001966) #19	ICOS (ENSAPLG00000002410) #20	PARD3B (ENSAPLG00000002583) #21	NRP2 (ENSAPLG00000002735) #22	INO80D (ENSAPLG00000004131) #23	NDUFS1 (ENSAPLG00000004262) #24	EEF1B2 (ENSAPLG00000004841) #25	CMKLR2 (ENSAPLG00000001630) #26	ADAM23 (ENSAPLG00000005205) #28	FAM237A (ENSAPLG00000005882) #29	ENSAPLG00000005888	MDH1B (ENSAPLG00000006087) #31	FASTKD2 (ENSAPLG00000006177) #32	CPO (ENSAPLG00000006729)	KLF7 (ENSAPLG00000006752) #34	CREB1 (ENSAPLG00000006786) #35	METTL21A (ENSAPLG00000007133) #36	ENSAPLG00000007167 #37	ENSAPLG00000001632
Pink-footed goose	MODERN SPECIES	120										ABI2 (ENSABRG00000018029) #16	RAPH1 (ENSABRG00000018013) #17	CD28 (ENSABRG00000018006) #18	CTLA4 (ENSABRG00000018000) #19	ICOS (ENSABRG00000017991) #20	PARD3B (ENSABRG00000017834) #21	NRP2 (ENSABRG00000017280) #22	INO80D (ENSABRG00000017222) #23	NDUFS1 (ENSABRG00000017107) #24	EEF1B2 (ENSABRG00000017085) #25	CMKLR2 (ENSABRG00000017081) #26	ADAM23 (ENSABRG00000016867) #28	FAM237A (ENSABRG00000016843) #29	MDH1B (ENSABRG00000016828) #31	FASTKD2 (ENSABRG00000016816) #32	CPO (ENSABRG00000016806)	KLF7 (ENSABRG00000016797) #34	CREB1 (ENSABRG00000016788) #35	ENSABRG00000016786 #36	ENSABRG00000016702 #37	ENSABRG00000016686	PLEKHM3 (ENSABRG00000016681)
Phasianidae	ANCESTRAL SPECIES	8	ENSGT00940000160192	ENSGT00940000157043	ENSGT00940000155558	ENSGT00940000156307.b	ENSGT00390000012547.b	ENSGT00940000154107.b.j.b	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408.b #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.d #37
Japanese quail	MODERN SPECIES	25	KLF7 (ENSCJPG00005015354) #34	CPO (ENSCJPG00005015355)	FASTKD2 (ENSCJPG00005015357) #32	MDH1B (ENSCJPG00005015360) #31	ADAM23 (ENSCJPG00005015363) #28	CMKLR2 (ENSCJPG00005015367) #26	RAPH1 (ENSCJPG00005015370) #17	ENSCJPG00005015375	CD28 (ENSCJPG00005015378) #18	CTLA4 (ENSCJPG00005015379) #19	ICOS (ENSCJPG00005015381) #20	PARD3B (ENSCJPG00005015409) #21	ENSCJPG00005015846	ENSCJPG00005015847	ENSCJPG00005015848	NRP2 (ENSCJPG00005015851) #22	INO80D (ENSCJPG00005015857) #23	NDUFS1 (ENSCJPG00005015858) #24	EEF1B2 (ENSCJPG00005015859) #25	ABI2 (ENSCJPG00005015864) #16	CYP20A1 (ENSCJPG00005015897) #15	ENSCJPG00005015898	NBEAL1 (ENSCJPG00005015909) #14	ENSCJPG00005016282	IDH1 (ENSCJPG00005016283)	PIKFYVE (ENSCJPG00005016284)	DNAJC10 (ENSCJPG00005016431)	PDE1A (ENSCJPG00005016432)	PPP1R1C (ENSCJPG00005016722)	ITPRID2 (ENSCJPG00005016723)	NEUROD1 (ENSCJPG00005016724)
Phasianidae_b	ANCESTRAL SPECIES	8	ENSGT00940000160192	ENSGT00940000157043	ENSGT00940000155558	ENSGT00940000156307.b	ENSGT00390000012547.b	ENSGT00940000154107.b.j.b	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408.b #35	ENSGT00940000157249 #36	ENSGT00940000154453.b.d #37
Chicken	MODERN SPECIES	36	PPP1R1C (ENSGALG00010022396)	PDE1A (ENSGALG00010022334)	DNAJC10 (ENSGALG00010022293)	PIKFYVE (ENSGALG00010022245)	IDH1 (ENSGALG00010022213)	ENSGALG00010022181	NBEAL1 (ENSGALG00010022149) #14	ENSGALG00010022124	CYP20A1 (ENSGALG00010022116) #15	ABI2 (ENSGALG00010022079) #16	RAPH1 (ENSGALG00010022033) #17	CD28 (ENSGALG00010021995) #18	CTLA4 (ENSGALG00010021983) #19	ICOS (ENSGALG00010021971) #20	PARD3B (ENSGALG00010021734) #21	NRP2 (ENSGALG00010026008) #22	INO80D (ENSGALG00010025994) #23	NDUFS1 (ENSGALG00010025984) #24	EEF1B2 (ENSGALG00010025974) #25	GPR1 (ENSGALG00010025960) #26	ENSGALG00010025836 #27	ADAM23 (ENSGALG00010026825) #28	FAM237A (ENSGALG00010025900) #29	DYTN (ENSGALG00010025894) #30	MDH1B (ENSGALG00010025874) #31	FASTKD2 (ENSGALG00010025869) #32	CPO (ENSGALG00010025855)	KLF7 (ENSGALG00010025822) #34	CREB1 (ENSGALG00010025351) #35	METTL21A (ENSGALG00010025340) #36	FZD5 (ENSGALG00010025333)
Turkey	MODERN SPECIES	27	ITPRID2 (ENSMGAG00000009083)	PPP1R1C (ENSMGAG00000009069)	PDE1A (ENSMGAG00000009032)	ENSMGAG00000008939	ENSMGAG00000008920	ENSMGAG00000008985	ENSMGAG00000019768	NBEAL1 (ENSMGAG00000008870) #14	ENSMGAG00000019797	CYP20A1 (ENSMGAG00000008831) #15	ABI2 (ENSMGAG00000008821) #16	RAPH1 (ENSMGAG00000008794) #17	CD28 (ENSMGAG00000008783) #18	CTLA4 (ENSMGAG00000008759) #19	ICOS (ENSMGAG00000008751) #20	ENSMGAG00000021009 #22	PARD3B (ENSMGAG00000008728) #21	INO80D (ENSMGAG00000008621) #23	NDUFS1 (ENSMGAG00000008573) #24	EEF1B2 (ENSMGAG00000008548) #25	CMKLR2 (ENSMGAG00000016159) #26	ADAM23 (ENSMGAG00000008433) #28	FAM237A (ENSMGAG00000020531) #29	MDH1B (ENSMGAG00000008532) #31	FASTKD2 (ENSMGAG00000008516) #32	CPO (ENSMGAG00000008430)	KLF7 (ENSMGAG00000008396) #34	CREB1 (ENSMGAG00000008360) #35	METTL21A (ENSMGAG00000008350) #36	ENSMGAG00000008327 #37	ENSMGAG00000016153
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00940000157043	ENSGT00940000155558	ENSGT00940000156307.b	ENSGT00940000177631	ENSGT00390000012547.b	ENSGT00940000154107.b.j.b	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00970000193449	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT00940000155558	ENSGT00940000156307.b	ENSGT00390000012547.b	ENSGT00940000154107.b.j.b	ENSGT00390000004840	ENSGT00940000163494.a.b.g.b	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00940000160642 #26	ENSGT00440000037606.b #27	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37
Golden eagle	MODERN SPECIES	22	PIKFYVE (ENSACCG00020002433)	IDH1 (ENSACCG00020002412)	ENSACCG00020002399	ENSACCG00020002387	ENSACCG00020002374	ENSACCG00020002359	NBEAL1 (ENSACCG00020001867) #14	ENSACCG00020001270	CYP20A1 (ENSACCG00020001252) #15	ABI2 (ENSACCG00020001210) #16	RAPH1 (ENSACCG00020001057) #17	CD28 (ENSACCG00020000853) #18	CTLA4 (ENSACCG00020000823) #19	ICOS (ENSACCG00020000759) #20	PARD3B (ENSACCG00020000685) #21	NRP2 (ENSACCG00020000561) #22	INO80D (ENSACCG00020000521) #23	NDUFS1 (ENSACCG00020000486) #24	EEF1B2 (ENSACCG00020000452) #25	CMKLR2 (ENSACCG00020000445) #26	ADAM23 (ENSACCG00020000416) #28	FAM237A (ENSACCG00020000352) #29	DYTN (ENSACCG00020000333) #30	MDH1B (ENSACCG00020000316) #31	FASTKD2 (ENSACCG00020003396) #32	CPO (ENSACCG00020003371)	KLF7 (ENSACCG00020003351) #34	CREB1 (ENSACCG00020003332) #35	METTL21A (ENSACCG00020003321) #36	ENSACCG00020003303 #37	ENSACCG00020003288
Kakapo	MODERN SPECIES	22	ENSSHBG00005005122	ENSSHBG00005005117	IDH1 (ENSSHBG00005005110)	ENSSHBG00005005104	C2orf80 (ENSSHBG00005005096)	ENSSHBG00005005091	NBEAL1 (ENSSHBG00005003608) #14	ENSSHBG00005002906	CYP20A1 (ENSSHBG00005002889) #15	ABI2 (ENSSHBG00005002858) #16	RAPH1 (ENSSHBG00005002809) #17	CTLA4 (ENSSHBG00005002762) #19	ICOS (ENSSHBG00005002727) #20	PARD3B (ENSSHBG00005002706) #21	ENSSHBG00005002675 #21	NRP2 (ENSSHBG00005002621) #22	INO80D (ENSSHBG00005002582) #23	NDUFS1 (ENSSHBG00005002546) #24	EEF1B2 (ENSSHBG00005002514) #25	CMKLR2 (ENSSHBG00005002504) #26	ENSSHBG00005002492 #27	ADAM23 (ENSSHBG00005002434) #28	FAM237A (ENSSHBG00005002374) #29	MDH1B (ENSSHBG00005002354) #31	FASTKD2 (ENSSHBG00005002335) #32	CPO (ENSSHBG00005002311)	KLF7 (ENSSHBG00005002296) #34	CREB1 (ENSSHBG00005002287) #35	METTL21A (ENSSHBG00005002278) #36	ENSSHBG00005002269 #37	ENSSHBG00005002253
Passeriformes	ANCESTRAL SPECIES	6	ENSGT00940000157043	ENSGT00940000155558	ENSGT00940000156307.b	ENSGT00940000177631	ENSGT00390000012547.b	ENSGT00940000154107.b.j.b	ENSGT00940000155041 #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00970000193449	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT00940000157043	ENSGT00940000155558	ENSGT00940000156307.b	ENSGT00940000177631	ENSGT00390000012547.b	ENSGT00940000154107.b.j.b	ENSGT00940000155041.n #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00970000193449	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00940000157043	ENSGT00940000155558	ENSGT00940000156307.b	ENSGT00940000177631	ENSGT00390000012547.b	ENSGT00940000154107.b.j.b	ENSGT00940000155041.n #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00970000193449	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00940000162403 #30	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00940000157043	ENSGT00940000155558	ENSGT00940000156307.b	ENSGT00940000177631	ENSGT00390000012547.b	ENSGT00940000154107.b.j.b	ENSGT00940000155041.n #14	ENSGT00390000017619	ENSGT00500000044939 #15	ENSGT00940000156089 #16	ENSGT00940000156552 #17	ENSGT00530000063873.A #18	ENSGT00530000063873.B #19	ENSGT00390000000801 #20	ENSGT00950000183214.a.b.a.b #21	ENSGT00940000155270 #22	ENSGT00940000157974 #23	ENSGT00940000153514.b #24	ENSGT00950000183014.f.a #25	ENSGT00970000193449	ENSGT00940000160642 #26	ENSGT00940000158781 #28	ENSGT00390000015769.B #29	ENSGT00530000063410.b #31	ENSGT01030000234607.A.b #32	ENSGT00940000161508	ENSGT00940000155235 #34	ENSGT00940000155408 #35	ENSGT00940000157249 #36	ENSGT00940000154453.b #37	ENSGT00940000161191.B
Common canary	MODERN SPECIES	8	PPP1R1C (ENSSCAG00000001436)	PDE1A (ENSSCAG00000001471)	DNAJC10 (ENSSCAG00000001534)	PIKFYVE (ENSSCAG00000001572)	IDH1 (ENSSCAG00000001636)	ENSSCAG00000001645	NBEAL1 (ENSSCAG00000001665) #14	ENSSCAG00000001706	CYP20A1 (ENSSCAG00000001710) #15	ABI2 (ENSSCAG00000001723) #16	RAPH1 (ENSSCAG00000001749) #17	CD28 (ENSSCAG00000001788) #18	CTLA4 (ENSSCAG00000001805) #19	ICOS (ENSSCAG00000001811) #20	PARD3B (ENSSCAG00000001874) #21	NRP2 (ENSSCAG00000002055) #22	INO80D (ENSSCAG00000002336) #23	NDUFS1 (ENSSCAG00000002344) #24	EEF1B2 (ENSSCAG00000002352) #25	ENSSCAG00000002359	CMKLR2 (ENSSCAG00000002370) #26	ADAM23 (ENSSCAG00000002375) #28	FAM237A (ENSSCAG00000002412) #29	MDH1B (ENSSCAG00000002419) #31	FASTKD2 (ENSSCAG00000002424) #32	CPO (ENSSCAG00000002428)	KLF7 (ENSSCAG00000002434) #34	CREB1 (ENSSCAG00000002440) #35	METTL21A (ENSSCAG00000002451) #36	ENSSCAG00000002462 #37	ENSSCAG00000002470
Zebra finch	MODERN SPECIES	29	DNAJC10 (ENSTGUG00000009565)	PIKFYVE (ENSTGUG00000009607)	ENSTGUG00000028065	IDH1 (ENSTGUG00000023800)	ENSTGUG00000018851	NBEAL1 (ENSTGUG00000029141) #14	ENSTGUG00000025723	CYP20A1 (ENSTGUG00000009709) #15	ABI2 (ENSTGUG00000009728) #16	RAPH1 (ENSTGUG00000009747) #17	CD28 (ENSTGUG00000016732) #18	CTLA4 (ENSTGUG00000009756) #19	ICOS (ENSTGUG00000009766) #20	ENSTGUG00000025370	PARD3B (ENSTGUG00000009770) #21	NRP2 (ENSTGUG00000009797) #22	INO80D (ENSTGUG00000009890) #23	NDUFS1 (ENSTGUG00000009895) #24	EEF1B2 (ENSTGUG00000009931) #25	CMKLR2 (ENSTGUG00000009954) #26	ADAM23 (ENSTGUG00000009963) #28	DYTN (ENSTGUG00000027316) #30	FAM237A (ENSTGUG00000009992) #29	MDH1B (ENSTGUG00000009999) #31	FASTKD2 (ENSTGUG00000010004) #32	CPO (ENSTGUG00000010012)	KLF7 (ENSTGUG00000010017) #34	CREB1 (ENSTGUG00000021110) #35	METTL21A (ENSTGUG00000010049) #36	ENSTGUG00000010055 #37	ENSTGUG00000010062
Medium ground finch	MODERN SPECIES	1	PDE1A (ENSGFOG00000004634)	DNAJC10 (ENSGFOG00000004722)	PIKFYVE (ENSGFOG00000004768)	IDH1 (ENSGFOG00000004936)	ENSGFOG00000004948	NBEAL1 (ENSGFOG00000005037) #14	ENSGFOG00000006136	CYP20A1 (ENSGFOG00000006144) #15	ABI2 (ENSGFOG00000006158) #16	RAPH1 (ENSGFOG00000006191) #17	CD28 (ENSGFOG00000006204) #18	CTLA4 (ENSGFOG00000006210) #19	ICOS (ENSGFOG00000006216) #20	ENSGFOG00000006219	PARD3B (ENSGFOG00000006247) #21	NRP2 (ENSGFOG00000006567) #22	INO80D (ENSGFOG00000006596) #23	NDUFS1 (ENSGFOG00000006610) #24	EEF1B2 (ENSGFOG00000006636) #25	ENSGFOG00000006645	CMKLR2 (ENSGFOG00000006655) #26	ADAM23 (ENSGFOG00000006668) #28	FAM237A (ENSGFOG00000006747) #29	DYTN (ENSGFOG00000006753) #30	MDH1B (ENSGFOG00000006762) #31	FASTKD2 (ENSGFOG00000006769) #32	CPO (ENSGFOG00000006781)	KLF7 (ENSGFOG00000006789) #34	CREB1 (ENSGFOG00000006794) #35	METTL21A (ENSGFOG00000006799) #36	ENSGFOG00000006802 #37
Flycatcher	MODERN SPECIES	26	ENSFALG00000003616	ENSFALG00000003629	ENSFALG00000003640	ENSFALG00000023124	ENSFALG00000023047 #14	ENSFALG00000003658 #14	ENSFALG00000003669	CYP20A1 (ENSFALG00000003678) #15	ABI2 (ENSFALG00000003705) #16	RAPH1 (ENSFALG00000003713) #17	CD28 (ENSFALG00000003718) #18	CTLA4 (ENSFALG00000003729) #19	ICOS (ENSFALG00000003743) #20	PARD3B (ENSFALG00000003749) #21	ENSFALG00000024358	NRP2 (ENSFALG00000003789) #22	INO80D (ENSFALG00000003838) #23	NDUFS1 (ENSFALG00000003849) #24	EEF1B2 (ENSFALG00000003879) #25	CMKLR2 (ENSFALG00000015287) #26	ADAM23 (ENSFALG00000003913) #28	FAM237A (ENSFALG00000003948) #29	DYTN (ENSFALG00000003952) #30	MDH1B (ENSFALG00000003957) #31	FASTKD2 (ENSFALG00000003964) #32	CPO (ENSFALG00000003980)	KLF7 (ENSFALG00000003989) #34	ENSFALG00000023985	CREB1 (ENSFALG00000003996) #35	METTL21A (ENSFALG00000004003) #36	ENSFALG00000027089 #37
Great tit	MODERN SPECIES	27	PPP1R1C (ENSPMJG00000018351)	PDE1A (ENSPMJG00000018348)	DNAJC10 (ENSPMJG00000018346)	PIKFYVE (ENSPMJG00000018335)	IDH1 (ENSPMJG00000018333)	ENSPMJG00000018332	NBEAL1 (ENSPMJG00000018330) #14	ENSPMJG00000018329	CYP20A1 (ENSPMJG00000018328) #15	ABI2 (ENSPMJG00000018327) #16	RAPH1 (ENSPMJG00000018308) #17	CD28 (ENSPMJG00000018298) #18	CTLA4 (ENSPMJG00000018297) #19	ICOS (ENSPMJG00000018295) #20	PARD3B (ENSPMJG00000018290) #21	NRP2 (ENSPMJG00000018287) #22	INO80D (ENSPMJG00000018285) #23	NDUFS1 (ENSPMJG00000018281) #24	EEF1B2 (ENSPMJG00000018274) #25	CMKLR2 (ENSPMJG00000018273) #26	ADAM23 (ENSPMJG00000018267) #28	FAM237A (ENSPMJG00000018264) #29	DYTN (ENSPMJG00000018263) #30	MDH1B (ENSPMJG00000018262) #31	FASTKD2 (ENSPMJG00000018261) #32	CPO (ENSPMJG00000018259)	KLF7 (ENSPMJG00000018257) #34	CREB1 (ENSPMJG00000018256) #35	METTL21A (ENSPMJG00000018255) #36	ENSPMJG00000018252 #37	ENSPMJG00000018250
African ostrich	MODERN SPECIES	602															ENSSCUG00000009062 #21	NRP2 (ENSSCUG00000009065) #22	INO80D (ENSSCUG00000009069) #23	NDUFS1 (ENSSCUG00000009074) #24	EEF1B2 (ENSSCUG00000009076) #25	CMKLR2 (ENSSCUG00000009084) #26	ADAM23 (ENSSCUG00000009094) #28	FAM237A (ENSSCUG00000009115) #29	DYTN (ENSSCUG00000009118) #30	MDH1B (ENSSCUG00000009125) #31	FASTKD2 (ENSSCUG00000009126) #32	CPO (ENSSCUG00000009130)	KLF7 (ENSSCUG00000009135) #34	CREB1 (ENSSCUG00000009137) #35	METTL21A (ENSSCUG00000009140) #36	ENSSCUG00000009142 #37	PLEKHM3 (ENSSCUG00000009146)
Australian saltwater crocodile	MODERN SPECIES	66	FAM117B (ENSCPRG00005001420) #8	ENSCPRG00005001426	WDR12 (ENSCPRG00005001450) #11	CARF (ENSCPRG00005001462) #12	ENSCPRG00005001474	NBEAL1 (ENSCPRG00005001495) #14	ENSCPRG00005001521	CYP20A1 (ENSCPRG00005001526) #15	ABI2 (ENSCPRG00005001556) #16	RAPH1 (ENSCPRG00005001588) #17	CD28 (ENSCPRG00005001690) #18	CTLA4 (ENSCPRG00005001699) #19	ICOS (ENSCPRG00005001703) #20	ENSCPRG00005001708	PARD3B (ENSCPRG00005001781) #21	NRP2 (ENSCPRG00005001802) #22	INO80D (ENSCPRG00005001847) #23	NDUFS1 (ENSCPRG00005001849) #24	EEF1B2 (ENSCPRG00005001854) #25	CMKLR2 (ENSCPRG00005001863) #26	ADAM23 (ENSCPRG00005001887) #28	FAM237A (ENSCPRG00005001904) #29	DYTN (ENSCPRG00005001912) #30	MDH1B (ENSCPRG00005001923) #31	FASTKD2 (ENSCPRG00005001926) #32	CPO (ENSCPRG00005001934)	KLF7 (ENSCPRG00005001954) #34	CREB1 (ENSCPRG00005001961) #35	METTL21A (ENSCPRG00005001979) #36	ENSCPRG00005001990 #37	ENSCPRG00005002000