Euteleostomi ANCESTRAL SPECIES 107 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00530000063873.B #19 ENSGT00530000063873.A #17 ENSGT00940000156552 #14 ENSGT00940000156089 #13 ENSGT00940000176171 ENSGT00500000044939 #12 Sarcopterygii ANCESTRAL SPECIES 293 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 Tetrapoda ANCESTRAL SPECIES 6 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00390000003964.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B Amniota ANCESTRAL SPECIES 6 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00390000003964.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b Mammalia ANCESTRAL SPECIES 6 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b Theria ANCESTRAL SPECIES 5 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b Eutheria ANCESTRAL SPECIES 10 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Boreoeutheria ANCESTRAL SPECIES 14 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Euarchontoglires ANCESTRAL SPECIES 14 ENSGT01090000263468 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT01090000260046 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b Primates ANCESTRAL SPECIES 13 ENSGT00940000153534.A ENSGT01090000263468 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b Haplorrhini ANCESTRAL SPECIES 10 ENSGT00940000153534.A ENSGT01090000263468 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b Simiiformes ANCESTRAL SPECIES 15 ENSGT00940000153534.A ENSGT00390000008128.c.a.a ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b Catarrhini ANCESTRAL SPECIES 16 ENSGT00390000008128.c.a.a ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00940000153052.c.b.a.a.a.a.a.a.a #18 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00910000148124 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.a #25 ENSGT00940000160642 #26 ENSGT00390000015060.n #27 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 Cercopithecidae ANCESTRAL SPECIES 13 ENSGT00390000008128.c.a.a ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a #18 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00910000148124 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.a.a #25 ENSGT00940000160642 #26 ENSGT00390000015060.n #27 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 Rhinopithecus ANCESTRAL SPECIES 73 ENSGT00390000008128.c.a.a ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a #18 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.a.a #25 ENSGT00940000160642 #26 ENSGT00390000015060.n #27 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b.c ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 Golden snub-nosed monkey MODERN SPECIES 2758 CARF (ENSRROG00000045180) #10 NBEAL1 (ENSRROG00000015491) #11 CYP20A1 (ENSRROG00000040044) #12 ABI2 (ENSRROG00000040959) #13 RAPH1 (ENSRROG00000010278) #14 ENSRROG00000006311 #15 ENSRROG00000034411 #16 CD28 (ENSRROG00000043826) #17 ENSRROG00000034095 #18 CTLA4 (ENSRROG00000028565) #19 ICOS (ENSRROG00000038288) #20 PARD3B (ENSRROG00000013717) #21 NRP2 (ENSRROG00000040911) #22 INO80D (ENSRROG00000003571) #23 NDUFS1 (ENSRROG00000033953) #24 ENSRROG00000041925 #25 CMKLR2 (ENSRROG00000015659) #26 ENSRROG00000038360 #27 ZDBF2 (ENSRROG00000032109) #28 ADAM23 (ENSRROG00000036437) #29 Black snub-nosed monkey MODERN SPECIES 1164 PARD3B (ENSRBIG00000039853) #21 NRP2 (ENSRBIG00000035417) #22 INO80D (ENSRBIG00000044868) #23 NDUFS1 (ENSRBIG00000020611) #24 ENSRBIG00000040112 #25 ENSRBIG00000031452 #27 ZDBF2 (ENSRBIG00000033928) #28 ADAM23 (ENSRBIG00000032092) #29 FAM237A (ENSRBIG00000033114) DYTN (ENSRBIG00000028505) ENSRBIG00000025761 FASTKD2 (ENSRBIG00000039778) CPO (ENSRBIG00000037719) KLF7 (ENSRBIG00000040855) Cercopithecinae ANCESTRAL SPECIES 11 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a #18 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00910000148124 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.a.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 Cercopithecinae_a ANCESTRAL SPECIES 16 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a #18 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00910000148124 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.a.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00950000182810.A.a.a.lb.d ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 Macaca ANCESTRAL SPECIES 15 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552.b #14 ENSGT00530000063873.A #17 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a.b #18 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00910000148124 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.a.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00950000182810.A.a.a.lb.d ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 Pig-tailed macaque MODERN SPECIES 409 FAM117B (ENSMNEG00000033073) ICA1L (ENSMNEG00000039428) ENSMNEG00000027411 CARF (ENSMNEG00000033105) #10 NBEAL1 (ENSMNEG00000044041) #11 CYP20A1 (ENSMNEG00000045164) #12 ABI2 (ENSMNEG00000028519) #13 RAPH1 (ENSMNEG00000030823) #14 ENSMNEG00000036304 #16 CD28 (ENSMNEG00000033642) #17 ENSMNEG00000030427 #18 CTLA4 (ENSMNEG00000043834) #19 ICOS (ENSMNEG00000029598) #20 PARD3B (ENSMNEG00000040103) #21 ENSMNEG00000031020 NRP2 (ENSMNEG00000039082) #22 INO80D (ENSMNEG00000032459) #23 NDUFS1 (ENSMNEG00000032822) #24 ENSMNEG00000030060 #25 ZDBF2 (ENSMNEG00000031863) #28 ENSMNEG00000028225 ADAM23 (ENSMNEG00000027959) #29 FAM237A (ENSMNEG00000032870) DYTN (ENSMNEG00000038040) MDH1B (ENSMNEG00000043559) FASTKD2 (ENSMNEG00000043091) CPO (ENSMNEG00000008835) KLF7 (ENSMNEG00000027996) CREB1 (ENSMNEG00000030274) METTL21A (ENSMNEG00000034465) CCNYL1 (ENSMNEG00000035559) Macaca_a ANCESTRAL SPECIES 17 ENSGT00940000154319.u.b.a.b ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552.b #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.a.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b.a Rhesus MODERN SPECIES 3 FAM117B (ENSMMUG00000021152) ICA1L (ENSMMUG00000017364) ENSMMUG00000059397 WDR12 (ENSMMUG00000043068) CARF (ENSMMUG00000006418) #10 NBEAL1 (ENSMMUG00000006420) #11 CYP20A1 (ENSMMUG00000005971) #12 ABI2 (ENSMMUG00000000312) #13 RAPH1 (ENSMMUG00000000314) #14 CD28 (ENSMMUG00000057214) #17 CTLA4 (ENSMMUG00000015903) #19 ICOS (ENSMMUG00000002648) #20 ENSMMUG00000052080 PARD3B (ENSMMUG00000014814) #21 ENSMMUG00000055410 NRP2 (ENSMMUG00000020052) #22 INO80D (ENSMMUG00000001053) #23 ENSMMUG00000054550 NDUFS1 (ENSMMUG00000016788) #24 EEF1B2 (ENSMMUG00000001054) #25 CMKLR2 (ENSMMUG00000008334) #26 ZDBF2 (ENSMMUG00000031276) #28 ADAM23 (ENSMMUG00000011641) #29 FAM237A (ENSMMUG00000052987) DYTN (ENSMMUG00000048288) MDH1B (ENSMMUG00000017734) FASTKD2 (ENSMMUG00000017735) CPO (ENSMMUG00000063052) ENSMMUG00000051957 KLF7 (ENSMMUG00000000190) CREB1 (ENSMMUG00000022601) Crab-eating macaque MODERN SPECIES 3 ENSMFAG00000055750 ENSMFAG00000048371 ENSMFAG00000044326 CARF (ENSMFAG00000042636) #10 NBEAL1 (ENSMFAG00000032529) #11 ENSMFAG00000065796 CYP20A1 (ENSMFAG00000036924) #12 ENSMFAG00000048556 ABI2 (ENSMFAG00000031286) #13 ENSMFAG00000003148 #14 ENSMFAG00000062324 #14 CD28 (ENSMFAG00000003864) #17 CTLA4 (ENSMFAG00000004047) #19 ICOS (ENSMFAG00000053159) #20 PARD3B (ENSMFAG00000043904) #21 NRP2 (ENSMFAG00000038385) #22 ENSMFAG00000053377 INO80D (ENSMFAG00000001629) #23 NDUFS1 (ENSMFAG00000039201) #24 ENSMFAG00000038364 #25 CMKLR2 (ENSMFAG00000013528) #26 ZDBF2 (ENSMFAG00000044616) #28 ADAM23 (ENSMFAG00000030094) #29 FAM237A (ENSMFAG00000031105) DYTN (ENSMFAG00000044098) MDH1B (ENSMFAG00000035811) ENSMFAG00000049460 FASTKD2 (ENSMFAG00000033471) CPO (ENSMFAG00000062349) KLF7 (ENSMFAG00000039083) ENSMFAG00000041805 Cercopithecinae_b ANCESTRAL SPECIES 10 ENSGT00940000154319.u.b.a.b ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00910000148124 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.a.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00950000182810.A.a.a.lb.d ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 Olive baboon MODERN SPECIES 1 BMPR2 (ENSPANG00000006512) ENSPANG00000042529 FAM117B (ENSPANG00000009087) ICA1L (ENSPANG00000017467) ENSPANG00000008983 ENSPANG00000008982 #10 NBEAL1 (ENSPANG00000000692) #11 CYP20A1 (ENSPANG00000002439) #12 ABI2 (ENSPANG00000023238) #13 RAPH1 (ENSPANG00000018186) #14 CD28 (ENSPANG00000011488) #17 CTLA4 (ENSPANG00000007100) #19 ICOS (ENSPANG00000010251) #20 ENSPANG00000042490 PARD3B (ENSPANG00000017315) #21 NRP2 (ENSPANG00000011487) #22 INO80D (ENSPANG00000005753) #23 NDUFS1 (ENSPANG00000019101) #24 ENSPANG00000011248 #25 CMKLR2 (ENSPANG00000007301) #26 ZDBF2 (ENSPANG00000023236) #28 ENSPANG00000032033 ADAM23 (ENSPANG00000025872) #29 FAM237A (ENSPANG00000032174) DYTN (ENSPANG00000011028) MDH1B (ENSPANG00000022792) ENSPANG00000043039 FASTKD2 (ENSPANG00000012835) CPO (ENSPANG00000005004) KLF7 (ENSPANG00000005240) CREB1 (ENSPANG00000009083) Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000154319.u.b.a.b ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00910000148124 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.a.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00950000182810.A.a.a.lb.d ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 Sooty mangabey MODERN SPECIES 570 BMPR2 (ENSCATG00000033192) ENSCATG00000033526 FAM117B (ENSCATG00000033570) ICA1L (ENSCATG00000036911) ENSCATG00000035496 CARF (ENSCATG00000035061) #10 NBEAL1 (ENSCATG00000036478) #11 CYP20A1 (ENSCATG00000034415) #12 ABI2 (ENSCATG00000038300) #13 RAPH1 (ENSCATG00000044686) #14 ENSCATG00000043923 #16 CD28 (ENSCATG00000043017) #17 CTLA4 (ENSCATG00000036235) #19 ICOS (ENSCATG00000043591) #20 PARD3B (ENSCATG00000022284) #21 NRP2 (ENSCATG00000032051) #22 INO80D (ENSCATG00000044654) #23 NDUFS1 (ENSCATG00000037259) #24 ENSCATG00000037736 #25 ZDBF2 (ENSCATG00000037091) #28 ENSCATG00000037624 ADAM23 (ENSCATG00000043626) #29 FAM237A (ENSCATG00000036777) DYTN (ENSCATG00000035275) MDH1B (ENSCATG00000035467) FASTKD2 (ENSCATG00000038647) CPO (ENSCATG00000043384) KLF7 (ENSCATG00000041615) CREB1 (ENSCATG00000037133) METTL21A (ENSCATG00000041598) CCNYL1 (ENSCATG00000037115) Drill MODERN SPECIES 1089 NBEAL1 (ENSMLEG00000032708) #11 CYP20A1 (ENSMLEG00000034377) #12 ABI2 (ENSMLEG00000040577) #13 RAPH1 (ENSMLEG00000033969) #14 ENSMLEG00000004995 #16 CD28 (ENSMLEG00000037603) #17 CTLA4 (ENSMLEG00000037639) #19 ICOS (ENSMLEG00000007807) #20 PARD3B (ENSMLEG00000031270) #21 ENSMLEG00000040986 NRP2 (ENSMLEG00000035732) #22 INO80D (ENSMLEG00000039669) #23 Vervet Monkey MODERN SPECIES 1 NOP58 (ENSCSAG00000010496) BMPR2 (ENSCSAG00000010485) FAM117B (ENSCSAG00000010474) ICA1L (ENSCSAG00000010466) ENSCSAG00000010442 CARF (ENSCSAG00000010380) #10 NBEAL1 (ENSCSAG00000010364) #11 CYP20A1 (ENSCSAG00000010341) #12 ABI2 (ENSCSAG00000010327) #13 RAPH1 (ENSCSAG00000010318) #14 CD28 (ENSCSAG00000010308) #17 ENSCSAG00000010293 #18 CTLA4 (ENSCSAG00000010288) #19 ICOS (ENSCSAG00000010281) #20 PARD3B (ENSCSAG00000010270) #21 NRP2 (ENSCSAG00000010258) #22 INO80D (ENSCSAG00000010251) #23 NDUFS1 (ENSCSAG00000010247) #24 ENSCSAG00000010238 ##25 CMKLR2 (ENSCSAG00000018769) #26 ZDBF2 (ENSCSAG00000010233) #28 ENSCSAG00000010220 ADAM23 (ENSCSAG00000010198) #29 DYTN (ENSCSAG00000010181) MDH1B (ENSCSAG00000010163) FASTKD2 (ENSCSAG00000010158) CPO (ENSCSAG00000010143) KLF7 (ENSCSAG00000010117) CREB1 (ENSCSAG00000010111) METTL21A (ENSCSAG00000010107) CCNYL1 (ENSCSAG00000010093) Hominoidea ANCESTRAL SPECIES 15 ENSGT00390000008128.c.a.a ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d #18 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00910000148124 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.b.a.b ##25 ENSGT00940000160642 #26 ENSGT00390000015060.n #27 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 Hominidae ANCESTRAL SPECIES 17 ENSGT00390000008128.c.a.a ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d #18 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00910000148124 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.b.a.b ##25 ENSGT00940000160642 #26 ENSGT00390000015060.n #27 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT00950000183046.a.a ENSGT00610000087446 ENSGT00390000015889.j ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d #18 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00910000148124 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.b.a.b.a.a ##25 ENSGT00940000160642 #26 ENSGT00390000015060.n #27 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00950000183046.a.a ENSGT00610000087446 ENSGT00390000015889.j ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d #18 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00910000148124 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.b.a.b.a.a ##25 ENSGT00940000160642 #26 ENSGT00390000015060.n #27 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 Pan ANCESTRAL SPECIES 12 ENSGT00950000183046.a.a ENSGT00610000087446 ENSGT00390000015889.j ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d #18 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00910000148124 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.b.a.b.a.a ##25 ENSGT00940000160642 #26 ENSGT00390000015060.n #27 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 Chimpanzee MODERN SPECIES 15 ENSPTRG00000040928 ENSPTRG00000044806 ICA1L (ENSPTRG00000012822) WDR12 (ENSPTRG00000012823) CARF (ENSPTRG00000012824) #10 NBEAL1 (ENSPTRG00000012828) #11 ENSPTRG00000012829 #12 ABI2 (ENSPTRG00000012830) #13 RAPH1 (ENSPTRG00000012831) #14 ENSPTRG00000043246 #16 CD28 (ENSPTRG00000012833) #17 ENSPTRG00000051964 #18 CTLA4 (ENSPTRG00000044793) #19 ICOS (ENSPTRG00000012837) #20 PARD3B (ENSPTRG00000012838) #21 NRP2 (ENSPTRG00000012839) #22 INO80D (ENSPTRG00000012841) #23 NDUFS1 (ENSPTRG00000012842) #24 EEF1B2 (ENSPTRG00000049619) ##25 CMKLR2 (ENSPTRG00000012844) #26 ENSPTRG00000052002 #27 ZDBF2 (ENSPTRG00000029052) #28 ADAM23 (ENSPTRG00000012846) #29 FAM237A (ENSPTRG00000045763) DYTN (ENSPTRG00000042355) MDH1B (ENSPTRG00000012847) FASTKD2 (ENSPTRG00000012848) CPO (ENSPTRG00000012849) KLF7 (ENSPTRG00000012850) CREB1 (ENSPTRG00000043959) METTL21A (ENSPTRG00000012852) Bonobo MODERN SPECIES 15 BMPR2 (ENSPPAG00000017269) FAM117B (ENSPPAG00000041596) ENSPPAG00000027947 ICA1L (ENSPPAG00000037623) ENSPPAG00000033697 CARF (ENSPPAG00000042960) #10 NBEAL1 (ENSPPAG00000040934) #11 CYP20A1 (ENSPPAG00000040724) #12 ABI2 (ENSPPAG00000030582) #13 RAPH1 (ENSPPAG00000024317) #14 ENSPPAG00000032675 #16 CD28 (ENSPPAG00000034998) #17 CTLA4 (ENSPPAG00000041661) #19 ICOS (ENSPPAG00000037117) #20 PARD3B (ENSPPAG00000033958) #21 NRP2 (ENSPPAG00000041062) #22 ENSPPAG00000040957 INO80D (ENSPPAG00000017120) #23 NDUFS1 (ENSPPAG00000032284) #24 ENSPPAG00000033754 ##25 ENSPPAG00000031391 #27 ZDBF2 (ENSPPAG00000038901) #28 ADAM23 (ENSPPAG00000030147) #29 FAM237A (ENSPPAG00000028915) DYTN (ENSPPAG00000008787) ENSPPAG00000031338 FASTKD2 (ENSPPAG00000021300) CPO (ENSPPAG00000033230) KLF7 (ENSPPAG00000035305) CREB1 (ENSPPAG00000042817) METTL21A (ENSPPAG00000041715) Human MODERN SPECIES 11 NOP58 (ENSG00000055044) BMPR2 (ENSG00000204217) ENSG00000289490 FAM117B (ENSG00000138439) ICA1L (ENSG00000163596) WDR12 (ENSG00000138442) CARF (ENSG00000138380) #10 NBEAL1 (ENSG00000144426) #11 CYP20A1 (ENSG00000119004) #12 ABI2 (ENSG00000138443) #13 RAPH1 (ENSG00000173166) #14 CD28 (ENSG00000178562) #17 CTLA4 (ENSG00000163599) #19 ICOS (ENSG00000163600) #20 PARD3B (ENSG00000116117) #21 NRP2 (ENSG00000118257) #22 INO80D (ENSG00000114933) #23 NDUFS1 (ENSG00000023228) #24 EEF1B2 (ENSG00000114942) ##25 CMKLR2 (ENSG00000183671) #26 ZDBF2 (ENSG00000204186) #28 ADAM23 (ENSG00000114948) #29 FAM237A (ENSG00000235118) DYTN (ENSG00000232125) MDH1B (ENSG00000138400) FASTKD2 (ENSG00000118246) CPO (ENSG00000144410) KLF7 (ENSG00000118263) CREB1 (ENSG00000118260) METTL21A (ENSG00000144401) CCNYL1 (ENSG00000163249) Gorilla MODERN SPECIES 15 ENSGGOG00000014813 ENSGGOG00000016194 ICA1L (ENSGGOG00000017038) WDR12 (ENSGGOG00000026073) ENSGGOG00000036442 #10 NBEAL1 (ENSGGOG00000015453) #11 CYP20A1 (ENSGGOG00000007044) #12 ABI2 (ENSGGOG00000016384) #13 RAPH1 (ENSGGOG00000016399) #14 ENSGGOG00000023735 #16 CD28 (ENSGGOG00000041735) #17 ENSGGOG00000039900 #18 CTLA4 (ENSGGOG00000007961) #19 ICOS (ENSGGOG00000014097) #20 PARD3B (ENSGGOG00000034911) #21 NRP2 (ENSGGOG00000009537) #22 INO80D (ENSGGOG00000015570) #23 NDUFS1 (ENSGGOG00000001513) #24 EEF1B2 (ENSGGOG00000007002) ##25 ENSGGOG00000042195 #27 ZDBF2 (ENSGGOG00000023142) #28 ENSGGOG00000024971 ADAM23 (ENSGGOG00000012509) #29 FAM237A (ENSGGOG00000037017) DYTN (ENSGGOG00000027242) MDH1B (ENSGGOG00000002059) FASTKD2 (ENSGGOG00000002062) CPO (ENSGGOG00000016053) KLF7 (ENSGGOG00000009338) CREB1 (ENSGGOG00000024394) METTL21A (ENSGGOG00000015815) Orangutan MODERN SPECIES 15 NOP58 (ENSPPYG00000013084) BMPR2 (ENSPPYG00000013085) FAM117B (ENSPPYG00000037197) ENSPPYG00000034941 ICA1L (ENSPPYG00000013088) WDR12 (ENSPPYG00000040830) CARF (ENSPPYG00000013090) #10 NBEAL1 (ENSPPYG00000013092) #11 CYP20A1 (ENSPPYG00000013093) #12 ABI2 (ENSPPYG00000013094) #13 RAPH1 (ENSPPYG00000013096) #14 CD28 (ENSPPYG00000039922) #17 CTLA4 (ENSPPYG00000036623) #19 ICOS (ENSPPYG00000013100) #20 PARD3B (ENSPPYG00000013101) #21 NRP2 (ENSPPYG00000013102) #22 INO80D (ENSPPYG00000013104) #23 ENSPPYG00000038957 NDUFS1 (ENSPPYG00000013106) #24 EEF1B2 (ENSPPYG00000013107) ##25 CMKLR2 (ENSPPYG00000013108) #26 ZDBF2 (ENSPPYG00000013109) #28 ADAM23 (ENSPPYG00000013110) #29 FAM237A (ENSPPYG00000036282) DYTN (ENSPPYG00000031262) MDH1B (ENSPPYG00000013111) FASTKD2 (ENSPPYG00000013112) CPO (ENSPPYG00000013113) KLF7 (ENSPPYG00000013114) CREB1 (ENSPPYG00000013115) METTL21A (ENSPPYG00000013116) Gibbon MODERN SPECIES 14 WDR12 (ENSNLEG00000007018) CARF (ENSNLEG00000007026) #10 NBEAL1 (ENSNLEG00000007032) #11 ENSNLEG00000029450 CYP20A1 (ENSNLEG00000035097) #12 ENSNLEG00000007043 #13 RAPH1 (ENSNLEG00000007048) #14 ENSNLEG00000030127 ENSNLEG00000035533 #16 ENSNLEG00000029125 CD28 (ENSNLEG00000007057) #17 CTLA4 (ENSNLEG00000007059) #19 ICOS (ENSNLEG00000007065) #20 ENSNLEG00000007066 #21 ENSNLEG00000036209 #21 NRP2 (ENSNLEG00000007071) #22 INO80D (ENSNLEG00000032256) #23 NDUFS1 (ENSNLEG00000007090) #24 ENSNLEG00000007098 ##25 ENSNLEG00000033131 ZDBF2 (ENSNLEG00000007100) #28 ADAM23 (ENSNLEG00000007102) #29 FAM237A (ENSNLEG00000007112) DYTN (ENSNLEG00000007113) MDH1B (ENSNLEG00000007114) FASTKD2 (ENSNLEG00000007116) CPO (ENSNLEG00000007121) KLF7 (ENSNLEG00000035258) CREB1 (ENSNLEG00000007124) METTL21A (ENSNLEG00000007129) CCNYL1 (ENSNLEG00000007131) Platyrrhini ANCESTRAL SPECIES 9 ENSGT00940000156449 ENSGT00390000010308.cb.b ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00390000000685.o.b.a ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00390000001455.`b.a ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.b.b.b ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.a ENSGT00940000155408 ENSGT00940000157249.c Cebidae ANCESTRAL SPECIES 11 ENSGT00940000156449 ENSGT00390000010308.cb.b ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00390000000685.o.b.a ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00390000001455.`b.a ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.b.b.b.a ##25 ENSGT00940000160642 #26 ENSGT00950000183014.f.a.g.b.b.b.b ##25 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.a ENSGT00940000155408 Marmoset MODERN SPECIES 18 BMPR2 (ENSCJAG00000005066) FAM117B (ENSCJAG00000047724) ICA1L (ENSCJAG00000005162) WDR12 (ENSCJAG00000005171) CARF (ENSCJAG00000005224) #10 NBEAL1 (ENSCJAG00000031696) #11 ENSCJAG00000081284 CYP20A1 (ENSCJAG00000039360) #12 ABI2 (ENSCJAG00000005399) #13 RAPH1 (ENSCJAG00000005339) #14 CD28 (ENSCJAG00000042321) #17 CTLA4 (ENSCJAG00000005495) #19 ICOS (ENSCJAG00000005516) #20 PARD3B (ENSCJAG00000005521) #21 ENSCJAG00000076910 NRP2 (ENSCJAG00000005577) #22 ENSCJAG00000045767 INO80D (ENSCJAG00000005682) #23 NDUFS1 (ENSCJAG00000005725) #24 ENSCJAG00000005805 ##25 CMKLR2 (ENSCJAG00000077852) #26 ENSCJAG00000079037 ENSCJAG00000085853 ZDBF2 (ENSCJAG00000005812) #28 ADAM23 (ENSCJAG00000005821) #29 DYTN (ENSCJAG00000005926) MDH1B (ENSCJAG00000005953) FASTKD2 (ENSCJAG00000005971) ENSCJAG00000073541 CPO (ENSCJAG00000005991) ENSCJAG00000006023 Cebidae_a ANCESTRAL SPECIES 16 ENSGT00940000156449 ENSGT00390000010308.cb.b ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00390000000685.o.b.a ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00390000001455.`b.a ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.b.b.b.a ##25 ENSGT00950000183014.f.a.g.b.b.b.b ##25 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.a ENSGT00940000155408 ENSGT00940000157249.c Capuchin MODERN SPECIES 101 ENSCCAG00000026090 FAM117B (ENSCCAG00000031732) ICA1L (ENSCCAG00000027883) WDR12 (ENSCCAG00000005461) CARF (ENSCCAG00000019881) #10 NBEAL1 (ENSCCAG00000021158) #11 ENSCCAG00000031449 CYP20A1 (ENSCCAG00000036341) #12 ABI2 (ENSCCAG00000027705) #13 RAPH1 (ENSCCAG00000029188) #14 ENSCCAG00000031812 CD28 (ENSCCAG00000035864) #17 CTLA4 (ENSCCAG00000029978) #19 ICOS (ENSCCAG00000019210) #20 PARD3B (ENSCCAG00000034949) #21 NRP2 (ENSCCAG00000026361) #22 ENSCCAG00000029458 LSM5 (ENSCCAG00000032792) INO80D (ENSCCAG00000028441) #23 NDUFS1 (ENSCCAG00000021875) #24 ENSCCAG00000033644 ##25 ENSCCAG00000029547 ZDBF2 (ENSCCAG00000026606) #28 ADAM23 (ENSCCAG00000031476) #29 FAM237A (ENSCCAG00000025434) DYTN (ENSCCAG00000036386) Bolivian squirrel monkey MODERN SPECIES 56 ENSSBOG00000016073 ICA1L (ENSSBOG00000032973) WDR12 (ENSSBOG00000015132) CARF (ENSSBOG00000032523) #10 NBEAL1 (ENSSBOG00000032563) #11 ENSSBOG00000030482 CYP20A1 (ENSSBOG00000025384) #12 ABI2 (ENSSBOG00000031443) #13 RAPH1 (ENSSBOG00000036069) #14 ENSSBOG00000030839 #16 CD28 (ENSSBOG00000032327) #17 ENSSBOG00000030167 CTLA4 (ENSSBOG00000034817) #19 ICOS (ENSSBOG00000000744) #20 PARD3B (ENSSBOG00000029267) #21 NRP2 (ENSSBOG00000035290) #22 ENSSBOG00000034794 INO80D (ENSSBOG00000020878) #23 NDUFS1 (ENSSBOG00000028426) #24 ENSSBOG00000036258 ##25 ZDBF2 (ENSSBOG00000011111) #28 ADAM23 (ENSSBOG00000001918) #29 FAM237A (ENSSBOG00000033809) DYTN (ENSSBOG00000026100) MDH1B (ENSSBOG00000029880) FASTKD2 (ENSSBOG00000029513) CPO (ENSSBOG00000030310) ENSSBOG00000027628 ENSSBOG00000018885 CREB1 (ENSSBOG00000034085) ENSSBOG00000033378 Mas night monkey MODERN SPECIES 357 FAM117B (ENSANAG00000032237) ICA1L (ENSANAG00000036249) WDR12 (ENSANAG00000030065) CARF (ENSANAG00000032508) #10 NBEAL1 (ENSANAG00000029269) #11 ENSANAG00000023562 CYP20A1 (ENSANAG00000026608) #12 ABI2 (ENSANAG00000037183) #13 RAPH1 (ENSANAG00000037926) #14 CD28 (ENSANAG00000027528) #17 CTLA4 (ENSANAG00000027709) #19 ICOS (ENSANAG00000027294) #20 ENSANAG00000037162 ENSANAG00000037079 PARD3B (ENSANAG00000024698) #21 NRP2 (ENSANAG00000033490) #22 ENSANAG00000037758 INO80D (ENSANAG00000029568) #23 NDUFS1 (ENSANAG00000020079) #24 ENSANAG00000024356 ##25 ZDBF2 (ENSANAG00000020305) #28 ADAM23 (ENSANAG00000035087) #29 FAM237A (ENSANAG00000024386) DYTN (ENSANAG00000031986) MDH1B (ENSANAG00000008683) FASTKD2 (ENSANAG00000034550) CPO (ENSANAG00000023194) KLF7 (ENSANAG00000036279) CREB1 (ENSANAG00000025888) ENSANAG00000020586 CCNYL1 (ENSANAG00000020995) Tarsier MODERN SPECIES 4878 NRP2 (ENSTSYG00000033080) #22 INO80D (ENSTSYG00000030622) #23 NDUFS1 (ENSTSYG00000014545) #24 EEF1B2 (ENSTSYG00000014573) ##25 ZDBF2 (ENSTSYG00000035582) #28 Strepsirrhini ANCESTRAL SPECIES 10 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Lemuriformes ANCESTRAL SPECIES 5 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Lemuriformes_a ANCESTRAL SPECIES 15 ENSGT00940000153534.A ENSGT00390000001413.b ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Coquerels sifaka MODERN SPECIES 847 PARD3B (ENSPCOG00000018611) #21 NRP2 (ENSPCOG00000020112) #22 INO80D (ENSPCOG00000024934) #23 ENSPCOG00000018961 #24 EEF1B2 (ENSPCOG00000016289) ##25 ENSPCOG00000013632 ZDBF2 (ENSPCOG00000019226) #28 ADAM23 (ENSPCOG00000023473) #29 FAM237A (ENSPCOG00000018015) DYTN (ENSPCOG00000020018) MDH1B (ENSPCOG00000017083) FASTKD2 (ENSPCOG00000028714) CPO (ENSPCOG00000028646) KLF7 (ENSPCOG00000018231) CREB1 (ENSPCOG00000021255) METTL21A (ENSPCOG00000018442) ENSPCOG00000013286 Greater bamboo lemur MODERN SPECIES 388 CD28 (ENSPSMG00000022341) #17 ENSPSMG00000022328 CTLA4 (ENSPSMG00000022319) #19 ICOS (ENSPSMG00000022309) #20 PARD3B (ENSPSMG00000022181) #21 NRP2 (ENSPSMG00000021719) #22 INO80D (ENSPSMG00000021497) #23 NDUFS1 (ENSPSMG00000021383) #24 EEF1B2 (ENSPSMG00000021215) ##25 CMKLR2 (ENSPSMG00000021198) #26 Mouse lemur MODERN SPECIES 30 FAM117B (ENSMICG00000042296) SLC16A14 (ENSMICG00000010609) FBXO36 (ENSMICG00000034045) ICA1L (ENSMICG00000002701) ENSMICG00000044580 CARF (ENSMICG00000011943) #10 ENSMICG00000026752 NBEAL1 (ENSMICG00000003736) #11 CYP20A1 (ENSMICG00000010806) #12 ABI2 (ENSMICG00000048062) #13 RAPH1 (ENSMICG00000001085) #14 CD28 (ENSMICG00000044645) #17 CTLA4 (ENSMICG00000032206) #19 ICOS (ENSMICG00000037046) #20 PARD3B (ENSMICG00000009358) #21 NRP2 (ENSMICG00000009376) #22 ENSMICG00000044290 INO80D (ENSMICG00000010590) #23 NDUFS1 (ENSMICG00000010601) #24 EEF1B2 (ENSMICG00000047922) ##25 ZDBF2 (ENSMICG00000044925) #28 ADAM23 (ENSMICG00000009477) #29 FAM237A (ENSMICG00000044768) DYTN (ENSMICG00000027944) MDH1B (ENSMICG00000009487) FASTKD2 (ENSMICG00000026515) CPO (ENSMICG00000015370) KLF7 (ENSMICG00000037405) CREB1 (ENSMICG00000009731) METTL21A (ENSMICG00000009739) ENSMICG00000009744 Bushbaby MODERN SPECIES 128 ENSOGAG00000030345 NOP58 (ENSOGAG00000003906) BMPR2 (ENSOGAG00000007765) FAM117B (ENSOGAG00000001497) ICA1L (ENSOGAG00000001500) WDR12 (ENSOGAG00000006573) CARF (ENSOGAG00000032187) #10 NBEAL1 (ENSOGAG00000015089) #11 CYP20A1 (ENSOGAG00000015164) #12 ENSOGAG00000033059 ABI2 (ENSOGAG00000011602) #13 RAPH1 (ENSOGAG00000015099) #14 CD28 (ENSOGAG00000012567) #17 CTLA4 (ENSOGAG00000002578) #19 PARD3B (ENSOGAG00000007396) #21 NRP2 (ENSOGAG00000007405) #22 INO80D (ENSOGAG00000005756) #23 NDUFS1 (ENSOGAG00000011226) #24 EEF1B2 (ENSOGAG00000011229) ##25 CMKLR2 (ENSOGAG00000011232) #26 ENSOGAG00000031172 ZDBF2 (ENSOGAG00000016996) #28 ENSOGAG00000031644 ADAM23 (ENSOGAG00000016997) #29 DYTN (ENSOGAG00000027434) MDH1B (ENSOGAG00000017006) FASTKD2 (ENSOGAG00000017008) CPO (ENSOGAG00000017012) KLF7 (ENSOGAG00000017014) CREB1 (ENSOGAG00000007121) METTL21A (ENSOGAG00000007128) Euarchontoglires_A ANCESTRAL SPECIES 13 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Tree shrew MODERN SPECIES 653 PARD3B (ENSTBEG00000002494) #21 ENSTBEG00000004230 NRP2 (ENSTBEG00000004603) #22 Glires ANCESTRAL SPECIES 14 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Lagomorpha ANCESTRAL SPECIES 13 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041.ob #11 ENSGT00940000155041.nb #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 Rabbit MODERN SPECIES 18 ENSOCUG00000006347 ENSOCUG00000030693 ENSOCUG00000010497 WDR12 (ENSOCUG00000002961) CARF (ENSOCUG00000005335) #10 ENSOCUG00000027134 NBEAL1 (ENSOCUG00000008716) #11 CYP20A1 (ENSOCUG00000008054) #12 ENSOCUG00000008062 #13 ENSOCUG00000016722 #14 CD28 (ENSOCUG00000016134) #17 ENSOCUG00000030918 CTLA4 (ENSOCUG00000017274) #19 ICOS (ENSOCUG00000001858) #20 PARD3B (ENSOCUG00000007959) #21 NRP2 (ENSOCUG00000007978) #22 INO80D (ENSOCUG00000014786) #23 ENSOCUG00000009848 ##25 NDUFS1 (ENSOCUG00000012368) #24 CMKLR2 (ENSOCUG00000012384) #26 ENSOCUG00000024602 ENSOCUG00000009421 #28 ADAM23 (ENSOCUG00000010659) #29 DYTN (ENSOCUG00000021490) MDH1B (ENSOCUG00000010506) ENSOCUG00000010515 CPO (ENSOCUG00000009806) KLF7 (ENSOCUG00000009813) ENSOCUG00000027419 CREB1 (ENSOCUG00000005427) ENSOCUG00000005431 Pika MODERN SPECIES 3694 PARD3B (ENSOPRG00000010812) #21 ENSOPRG00000010848 NRP2 (ENSOPRG00000010856) #22 Rodentia ANCESTRAL SPECIES 14 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Rodentia_B ANCESTRAL SPECIES 12 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Myomorpha ANCESTRAL SPECIES 10 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Muroidea ANCESTRAL SPECIES 20 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 Muroidea_A ANCESTRAL SPECIES 19 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 Cricetidae ANCESTRAL SPECIES 19 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 Cricetinae ANCESTRAL SPECIES 3 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 Chinese hamster chok1gshd MODERN SPECIES 1 Nop58 (ENSCGRG00001017869) ENSCGRG00001009737 Bmpr2 (ENSCGRG00001020694) Fam117b (ENSCGRG00001020456) Ica1l (ENSCGRG00001018928) WDR12 (ENSCGRG00001016494) Carf (ENSCGRG00001016848) #10 Nbeal1 (ENSCGRG00001018313) #11 Cyp20a1 (ENSCGRG00001018508) #12 Abi2 (ENSCGRG00001017572) #13 Raph1 (ENSCGRG00001019075) #14 Cd28 (ENSCGRG00001021553) #17 Ctla4 (ENSCGRG00001017244) #19 Icos (ENSCGRG00001016804) #20 Pard3b (ENSCGRG00001023180) #21 Nrp2 (ENSCGRG00001001140) #22 Ino80d (ENSCGRG00001020225) #23 Ndufs1 (ENSCGRG00001018185) #24 Eef1b2 (ENSCGRG00001017503) ##25 Cmklr2 (ENSCGRG00001010463) #26 Zdbf2 (ENSCGRG00001018156) #28 Adam23 (ENSCGRG00001021362) #29 Gm39653 (ENSCGRG00001017288) Dytn (ENSCGRG00001017611) Mdh1b (ENSCGRG00001017642) Fastkd2 (ENSCGRG00001020432) Klf7 (ENSCGRG00001018794) ENSCGRG00001018665 Creb1 (ENSCGRG00001018838) Mettl21a (ENSCGRG00001017438) Ccnyl1 (ENSCGRG00001017467) Golden Hamster MODERN SPECIES 640 Nop58 (ENSMAUG00000009734) Bmpr2 (ENSMAUG00000009115) Fam117b (ENSMAUG00000017770) Ica1l (ENSMAUG00000013926) Wdr12 (ENSMAUG00000001279) Carf (ENSMAUG00000009693) #10 ENSMAUG00000007926 #11 ENSMAUG00000001805 #11 ENSMAUG00000007020 #12 Abi2 (ENSMAUG00000016724) #13 ENSMAUG00000008616 #14 Cd28 (ENSMAUG00000020132) #17 Ctla4 (ENSMAUG00000017208) #19 Icos (ENSMAUG00000019187) #20 Pard3b (ENSMAUG00000019516) #21 Nrp2 (ENSMAUG00000020662) #22 Ino80d (ENSMAUG00000012087) #23 ENSMAUG00000017015 #24 Eef1b2 (ENSMAUG00000011478) ##25 Cmklr2 (ENSMAUG00000009931) #26 Zdbf2 (ENSMAUG00000017491) #28 Adam23 (ENSMAUG00000012410) #29 Dytn (ENSMAUG00000021422) Mdh1b (ENSMAUG00000016431) Fastkd2 (ENSMAUG00000009136) Klf7 (ENSMAUG00000022037) Creb1 (ENSMAUG00000018215) Mettl21a (ENSMAUG00000020877) Fzd5 (ENSMAUG00000022033) Plekhm3 (ENSMAUG00000021638) ENSMAUG00000022028 Cricetidae_B ANCESTRAL SPECIES 20 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 Northern American deer mouse MODERN SPECIES 4 Bmpr2 (ENSPEMG00000022646) Fam117b (ENSPEMG00000011700) ENSPEMG00000024187 Ica1l (ENSPEMG00000021278) Wdr12 (ENSPEMG00000022189) Carf (ENSPEMG00000020983) #10 ENSPEMG00000028509 Nbeal1 (ENSPEMG00000029402) #11 Cyp20a1 (ENSPEMG00000023627) #12 Abi2 (ENSPEMG00000020443) #13 Raph1 (ENSPEMG00000022086) #14 Cd28 (ENSPEMG00000028537) #17 Ctla4 (ENSPEMG00000020722) #19 Icos (ENSPEMG00000015472) #20 Pard3b (ENSPEMG00000020745) #21 Nrp2 (ENSPEMG00000020944) #22 Ino80d (ENSPEMG00000020652) #23 Ndufs1 (ENSPEMG00000020453) #24 Eef1b2 (ENSPEMG00000016842) ##25 Cmklr2 (ENSPEMG00000000909) #26 Zdbf2 (ENSPEMG00000029531) #28 Adam23 (ENSPEMG00000020455) #29 Gm39653 (ENSPEMG00000029994) Dytn (ENSPEMG00000020630) Mdh1b (ENSPEMG00000012142) Fastkd2 (ENSPEMG00000010593) ENSPEMG00000029845 Klf7 (ENSPEMG00000028836) Creb1 (ENSPEMG00000012416) Mettl21a (ENSPEMG00000027520) Ccnyl1 (ENSPEMG00000022762) Prairie vole MODERN SPECIES 354 Daw1 (ENSMOCG00000014056) Sphkap (ENSMOCG00000010348) Pid1 (ENSMOCG00000022904) Dner (ENSMOCG00000020102) Trip12 (ENSMOCG00000021899) Fbxo36 (ENSMOCG00000015360) Slc16a14 (ENSMOCG00000006969) Nbeal1 (ENSMOCG00000015319) #11 Abi2 (ENSMOCG00000013762) #13 Raph1 (ENSMOCG00000016577) #14 Cd28 (ENSMOCG00000003240) #17 Ctla4 (ENSMOCG00000018484) #19 ENSMOCG00000017292 Icos (ENSMOCG00000008578) #20 Pard3b (ENSMOCG00000021107) #21 Nrp2 (ENSMOCG00000018160) #22 Ino80d (ENSMOCG00000022487) #23 Ndufs1 (ENSMOCG00000018918) #24 Eef1b2 (ENSMOCG00000004803) ##25 Zdbf2 (ENSMOCG00000021962) #28 Adam23 (ENSMOCG00000012227) #29 ENSMOCG00000001238 Dytn (ENSMOCG00000015652) Mdh1b (ENSMOCG00000001314) Fastkd2 (ENSMOCG00000019859) ENSMOCG00000008631 Klf7 (ENSMOCG00000009593) Creb1 (ENSMOCG00000002192) Mettl21a (ENSMOCG00000017410) Ccnyl1 (ENSMOCG00000016018) Fzd5 (ENSMOCG00000013581) Murinae ANCESTRAL SPECIES 9 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 Mus ANCESTRAL SPECIES 5 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00860000135862 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Mus_A ANCESTRAL SPECIES 5 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00860000135862 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a.c Mus_B ANCESTRAL SPECIES 7 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089.l #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00860000135862 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a.c Mus_C ANCESTRAL SPECIES 1 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089.l #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00860000135862 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a.c spretus MODERN SPECIES Sumo1 (MGP_SPRETEiJ_G0014987) Nop58 (MGP_SPRETEiJ_G0014988) Bmpr2 (MGP_SPRETEiJ_G0014989) MGP_SPRETEiJ_G0014990 Ica1l (MGP_SPRETEiJ_G0014991) Wdr12 (MGP_SPRETEiJ_G0014992) Carf (MGP_SPRETEiJ_G0014993) #10 Nbeal1 (MGP_SPRETEiJ_G0014994) #11 Cyp20a1 (MGP_SPRETEiJ_G0014995) #12 Abi2 (MGP_SPRETEiJ_G0014996) #13 Raph1 (MGP_SPRETEiJ_G0014997) #14 Cd28 (MGP_SPRETEiJ_G0014998) #17 Ctla4 (MGP_SPRETEiJ_G0014999) #19 Icos (MGP_SPRETEiJ_G0015000) #20 Pard3b (MGP_SPRETEiJ_G0015001) #21 Nrp2 (MGP_SPRETEiJ_G0015002) #22 Ino80d (MGP_SPRETEiJ_G0015003) #23 Ndufs1 (MGP_SPRETEiJ_G0015004) #24 Eef1b2 (MGP_SPRETEiJ_G0015005) ##25 Cmklr2 (MGP_SPRETEiJ_G0015006) #26 Zdbf2 (MGP_SPRETEiJ_G0015007) #28 Adam23 (MGP_SPRETEiJ_G0015008) #29 Dytn (MGP_SPRETEiJ_G0015009) Mdh1b (MGP_SPRETEiJ_G0015010) Fastkd2 (MGP_SPRETEiJ_G0015011) MGP_SPRETEiJ_G0015012 Klf7 (MGP_SPRETEiJ_G0015013) Creb1 (MGP_SPRETEiJ_G0015014) Mettl21a (MGP_SPRETEiJ_G0015015) Ccnyl1 (MGP_SPRETEiJ_G0015016) Fzd5 (MGP_SPRETEiJ_G0015017) Steppe mouse MODERN SPECIES 44 Fam117b (ENSMSIG00000010018) Ica1l (ENSMSIG00000010027) Wdr12 (ENSMSIG00000010103) Carf (ENSMSIG00000010210) #10 ENSMSIG00000010287 Nbeal1 (ENSMSIG00000010304) #11 Cyp20a1 (ENSMSIG00000010618) #12 ENSMSIG00000010702 #13 Raph1 (ENSMSIG00000010756) #14 Cd28 (ENSMSIG00000011356) #17 ENSMSIG00000011370 Ctla4 (ENSMSIG00000011388) #19 Icos (ENSMSIG00000011424) #20 Pard3b (ENSMSIG00000011469) #21 ENSMSIG00000011764 Nrp2 (ENSMSIG00000011775) #22 Ino80d (ENSMSIG00000012604) #23 Ndufs1 (ENSMSIG00000012674) #24 Eef1b2 (ENSMSIG00000012804) ##25 Cmklr2 (ENSMSIG00000012880) #26 Zdbf2 (ENSMSIG00000012889) #28 ENSMSIG00000012937 Adam23 (ENSMSIG00000012957) #29 ENSMSIG00000013264 Gm39653 (ENSMSIG00000013270) Dytn (ENSMSIG00000013289) Mouse MODERN SPECIES Sumo1 (ENSMUSG00000026021) Nop58 (ENSMUSG00000026020) Bmpr2 (ENSMUSG00000067336) Fam117b (ENSMUSG00000041040) Ica1l (ENSMUSG00000026018) Wdr12 (ENSMUSG00000026019) Carf (ENSMUSG00000026017) #10 Nbeal1 (ENSMUSG00000073664) #11 Cyp20a1 (ENSMUSG00000049439) #12 Abi2 (ENSMUSG00000026782) #13 Raph1 (ENSMUSG00000026014) #14 Cd28 (ENSMUSG00000026012) #17 Ctla4 (ENSMUSG00000026011) #19 Icos (ENSMUSG00000026009) #20 Pard3b (ENSMUSG00000052062) #21 Nrp2 (ENSMUSG00000025969) #22 Ino80d (ENSMUSG00000040865) #23 Ndufs1 (ENSMUSG00000025968) #24 Eef1b2 (ENSMUSG00000025967) ##25 Cmklr2 (ENSMUSG00000046856) #26 Zdbf2 (ENSMUSG00000027520) #28 Adam23 (ENSMUSG00000025964) #29 Gm39653 (ENSMUSG00000115378) Dytn (ENSMUSG00000069085) Mdh1b (ENSMUSG00000025963) Fastkd2 (ENSMUSG00000025962) Klf7 (ENSMUSG00000025959) Creb1 (ENSMUSG00000025958) Mettl21a (ENSMUSG00000025956) Ccnyl1 (ENSMUSG00000070871) Fzd5 (ENSMUSG00000045005) Ryukyu mouse MODERN SPECIES Sumo1 (MGP_CAROLIEiJ_G0014180) Nop58 (MGP_CAROLIEiJ_G0014181) Bmpr2 (MGP_CAROLIEiJ_G0014182) Fam117b (MGP_CAROLIEiJ_G0014183) MGP_CAROLIEiJ_G0014184 MGP_CAROLIEiJ_G0014185 Carf (MGP_CAROLIEiJ_G0014186) #10 Nbeal1 (MGP_CAROLIEiJ_G0014187) #11 Cyp20a1 (MGP_CAROLIEiJ_G0014188) #12 Abi2 (MGP_CAROLIEiJ_G0014189) #13 Raph1 (MGP_CAROLIEiJ_G0014190) #14 Cd28 (MGP_CAROLIEiJ_G0014191) #17 Ctla4 (MGP_CAROLIEiJ_G0014192) #19 Icos (MGP_CAROLIEiJ_G0014193) #20 Pard3b (MGP_CAROLIEiJ_G0014194) #21 Nrp2 (MGP_CAROLIEiJ_G0014195) #22 Ino80d (MGP_CAROLIEiJ_G0014196) #23 Ndufs1 (MGP_CAROLIEiJ_G0014197) #24 Eef1b2 (MGP_CAROLIEiJ_G0014198) ##25 Cmklr2 (MGP_CAROLIEiJ_G0014199) #26 Zdbf2 (MGP_CAROLIEiJ_G0014200) #28 Adam23 (MGP_CAROLIEiJ_G0014201) #29 Dytn (MGP_CAROLIEiJ_G0014202) Mdh1b (MGP_CAROLIEiJ_G0014203) Fastkd2 (MGP_CAROLIEiJ_G0014204) MGP_CAROLIEiJ_G0014205 Klf7 (MGP_CAROLIEiJ_G0014206) Creb1 (MGP_CAROLIEiJ_G0014207) Mettl21a (MGP_CAROLIEiJ_G0014208) Ccnyl1 (MGP_CAROLIEiJ_G0014209) Fzd5 (MGP_CAROLIEiJ_G0014210) Shrew mouse MODERN SPECIES 18 MGP_PahariEiJ_G0027418 Nop58 (MGP_PahariEiJ_G0027419) Bmpr2 (MGP_PahariEiJ_G0027420) Fam117b (MGP_PahariEiJ_G0027421) MGP_PahariEiJ_G0027422 MGP_PahariEiJ_G0027423 Carf (MGP_PahariEiJ_G0027424) #10 MGP_PahariEiJ_G0027425 #11 Cyp20a1 (MGP_PahariEiJ_G0027426) #12 Abi2 (MGP_PahariEiJ_G0027427) #13 Raph1 (MGP_PahariEiJ_G0027428) #14 Cd28 (MGP_PahariEiJ_G0027429) #17 Ctla4 (MGP_PahariEiJ_G0027430) #19 MGP_PahariEiJ_G0027431 #20 Pard3b (MGP_PahariEiJ_G0027432) #21 Nrp2 (MGP_PahariEiJ_G0027433) #22 Ino80d (MGP_PahariEiJ_G0027434) #23 MGP_PahariEiJ_G0027435 #24 Eef1b2 (MGP_PahariEiJ_G0027436) ##25 Cmklr2 (MGP_PahariEiJ_G0027437) #26 Zdbf2 (MGP_PahariEiJ_G0027438) #28 Adam23 (MGP_PahariEiJ_G0027439) #29 Dytn (MGP_PahariEiJ_G0027440) Mdh1b (MGP_PahariEiJ_G0027441) Fastkd2 (MGP_PahariEiJ_G0027442) MGP_PahariEiJ_G0027443 Klf7 (MGP_PahariEiJ_G0027444) Creb1 (MGP_PahariEiJ_G0027445) Mettl21a (MGP_PahariEiJ_G0027446) Ccnyl1 (MGP_PahariEiJ_G0027447) Fzd5 (MGP_PahariEiJ_G0027448) Rat MODERN SPECIES 19 Bmpr2 (ENSRNOG00000022196) ENSRNOG00000066953 LOC301444 (ENSRNOG00000019107) Fam117b (ENSRNOG00000022066) Ica1l (ENSRNOG00000017258) Wdr12 (ENSRNOG00000017340) Carf (ENSRNOG00000017491) #10 Nbeal1 (ENSRNOG00000021525) #11 Cyp20a1 (ENSRNOG00000017631) #12 Abi2 (ENSRNOG00000017707) #13 Raph1 (ENSRNOG00000014722) #14 Cd28 (ENSRNOG00000010283) #17 Ctla4 (ENSRNOG00000054129) #19 Icos (ENSRNOG00000046196) #20 Pard3b (ENSRNOG00000024345) #21 Nrp2 (ENSRNOG00000031232) #22 Rpl37-ps5 (ENSRNOG00000033803) Ino80d (ENSRNOG00000024272) #23 Ndufs1 (ENSRNOG00000011849) #24 Eef1b2 (ENSRNOG00000024186) ##25 Cmklr2 (ENSRNOG00000045532) #26 Zdbf2 (ENSRNOG00000024114) #28 Adam23 (ENSRNOG00000012424) #29 Fam237a (ENSRNOG00000054699) Dytn (ENSRNOG00000042181) Mdh1b (ENSRNOG00000012891) ENSRNOG00000063009 Fastkd2 (ENSRNOG00000023923) ENSRNOG00000063607 Klf7 (ENSRNOG00000046242) LOC103690545 (ENSRNOG00000064370) Upper Galilee mountains blind mole rat MODERN SPECIES 1322 Nbeal1 (ENSNGAG00000020072) #11 Cyp20a1 (ENSNGAG00000020232) #12 Abi2 (ENSNGAG00000012110) #13 ENSNGAG00000001490 #14 Cd28 (ENSNGAG00000015761) #17 Ctla4 (ENSNGAG00000019017) #19 ENSNGAG00000010975 Icos (ENSNGAG00000015325) #20 Pard3b (ENSNGAG00000019309) #21 Nrp2 (ENSNGAG00000014175) #22 Ino80d (ENSNGAG00000007370) #23 Ndufs1 (ENSNGAG00000016531) #24 Eef1b2 (ENSNGAG00000020801) ##25 Cmklr2 (ENSNGAG00000014936) #26 Zdbf2 (ENSNGAG00000010826) #28 Adam23 (ENSNGAG00000014933) #29 Mdh1b (ENSNGAG00000000139) Fastkd2 (ENSNGAG00000001279) Klf7 (ENSNGAG00000016561) Creb1 (ENSNGAG00000018967) Mettl21a (ENSNGAG00000013752) ENSNGAG00000014167 Ccnyl1 (ENSNGAG00000004870) Fzd5 (ENSNGAG00000014954) Plekhm3 (ENSNGAG00000007962) Lesser Egyptian jerboa MODERN SPECIES 52 ENSJJAG00000022745 Nop58 (ENSJJAG00000018213) Bmpr2 (ENSJJAG00000015151) Fam117b (ENSJJAG00000019496) Ica1l (ENSJJAG00000022732) ENSJJAG00000000724 Carf (ENSJJAG00000014072) #10 Nbeal1 (ENSJJAG00000023210) #11 Cyp20a1 (ENSJJAG00000007155) #12 Abi2 (ENSJJAG00000006918) #13 ENSJJAG00000023840 #14 Cd28 (ENSJJAG00000001227) #17 Ctla4 (ENSJJAG00000013112) #19 Icos (ENSJJAG00000007794) #20 Pard3b (ENSJJAG00000015271) #21 Nrp2 (ENSJJAG00000016788) #22 Ino80d (ENSJJAG00000018074) #23 Ndufs1 (ENSJJAG00000013916) #24 Eef1b2 (ENSJJAG00000004915) ##25 Adam23 (ENSJJAG00000016078) #29 Dytn (ENSJJAG00000016868) Mdh1b (ENSJJAG00000010713) Fastkd2 (ENSJJAG00000000986) ENSJJAG00000021742 Klf7 (ENSJJAG00000011480) Creb1 (ENSJJAG00000013846) ENSJJAG00000023618 Ccnyl1 (ENSJJAG00000024111) Fzd5 (ENSJJAG00000004014) Plekhm3 (ENSJJAG00000012116) ENSJJAG00000021625 Kangaroo rat MODERN SPECIES 320 Bmpr2 (ENSDORG00000009209) ENSDORG00000015288 Ica1l (ENSDORG00000015292) Wdr12 (ENSDORG00000015294) Carf (ENSDORG00000006614) #10 Nbeal1 (ENSDORG00000015714) #11 Cyp20a1 (ENSDORG00000015715) #12 ENSDORG00000028647 Abi2 (ENSDORG00000028252) #13 ENSDORG00000007525 #14 Cd28 (ENSDORG00000013428) #17 Ctla4 (ENSDORG00000008556) #19 Icos (ENSDORG00000010237) #20 ENSDORG00000029364 Pard3b (ENSDORG00000014139) #21 ENSDORG00000029450 #22 Ino80d (ENSDORG00000027999) #23 ENSDORG00000025350 #24 ENSDORG00000023550 #24 Cmklr2 (ENSDORG00000013107) #26 Adam23 (ENSDORG00000015422) #29 Dytn (ENSDORG00000028814) Mdh1b (ENSDORG00000011290) Fastkd2 (ENSDORG00000011295) Klf7 (ENSDORG00000009634) Creb1 (ENSDORG00000012535) Mettl21a (ENSDORG00000012543) Ccnyl1 (ENSDORG00000009933) Fzd5 (ENSDORG00000027490) ENSDORG00000023690 Plekhm3 (ENSDORG00000029697) Rodentia_A ANCESTRAL SPECIES 13 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b Sciuridae ANCESTRAL SPECIES 10 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b Marmotini ANCESTRAL SPECIES 2 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.g ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b Marmotini_b ANCESTRAL SPECIES 103 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.g ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b Squirrel MODERN SPECIES 231 ABI2 (ENSSTOG00000015888) #13 RAPH1 (ENSSTOG00000028594) #14 CD28 (ENSSTOG00000026213) #17 CTLA4 (ENSSTOG00000020540) #19 ICOS (ENSSTOG00000013542) #20 PARD3B (ENSSTOG00000010207) #21 NRP2 (ENSSTOG00000010229) #22 INO80D (ENSSTOG00000028419) #23 NDUFS1 (ENSSTOG00000010255) #24 EEF1B2 (ENSSTOG00000005437) ##25 CMKLR2 (ENSSTOG00000005452) #26 ZDBF2 (ENSSTOG00000001663) #28 ADAM23 (ENSSTOG00000024094) #29 DYTN (ENSSTOG00000019822) MDH1B (ENSSTOG00000003194) FASTKD2 (ENSSTOG00000022821) CPO (ENSSTOG00000013351) KLF7 (ENSSTOG00000011069) CREB1 (ENSSTOG00000016482) METTL21A (ENSSTOG00000016483) ENSSTOG00000021511 CCNYL1 (ENSSTOG00000016484) Arctic ground squirrel MODERN SPECIES 141 CYP20A1 (ENSUPAG00010007092) #12 ABI2 (ENSUPAG00010007107) #13 RAPH1 (ENSUPAG00010007232) #14 ENSUPAG00010007347 CD28 (ENSUPAG00010007360) #17 CTLA4 (ENSUPAG00010007371) #19 ICOS (ENSUPAG00010007386) #20 PARD3B (ENSUPAG00010007426) #21 NRP2 (ENSUPAG00010007567) #22 INO80D (ENSUPAG00010007624) #23 NDUFS1 (ENSUPAG00010007661) #24 EEF1B2 (ENSUPAG00010007678) ##25 CMKLR2 (ENSUPAG00010007707) #26 ZDBF2 (ENSUPAG00010007725) #28 ADAM23 (ENSUPAG00010007731) #29 FAM237A (ENSUPAG00010007856) DYTN (ENSUPAG00010007862) MDH1B (ENSUPAG00010007886) FASTKD2 (ENSUPAG00010007916) CPO (ENSUPAG00010007941) KLF7 (ENSUPAG00010007967) CREB1 (ENSUPAG00010007984) METTL21A (ENSUPAG00010008009) CCNYL1 (ENSUPAG00010008021) Alpin marmot MODERN SPECIES 8 ENSMMMG00000013017 ENSMMMG00000013051 ENSMMMG00000013060 ICA1L (ENSMMMG00000013064) WDR12 (ENSMMMG00000013110) CARF (ENSMMMG00000013161) #10 NBEAL1 (ENSMMMG00000013229) #11 CYP20A1 (ENSMMMG00000013312) #12 ABI2 (ENSMMMG00000013329) #13 ENSMMMG00000013568 #14 CD28 (ENSMMMG00000013599) #17 CTLA4 (ENSMMMG00000013609) #19 ICOS (ENSMMMG00000013624) #20 PARD3B (ENSMMMG00000013680) #21 ENSMMMG00000013911 NRP2 (ENSMMMG00000013924) #22 INO80D (ENSMMMG00000014555) #23 NDUFS1 (ENSMMMG00000014566) #24 ENSMMMG00000014596 ##25 CMKLR2 (ENSMMMG00000014632) #26 ZDBF2 (ENSMMMG00000014650) #28 ADAM23 (ENSMMMG00000014678) #29 FAM237A (ENSMMMG00000014819) DYTN (ENSMMMG00000014828) ENSMMMG00000014844 MDH1B (ENSMMMG00000014852) FASTKD2 (ENSMMMG00000014857) CPO (ENSMMMG00000014874) KLF7 (ENSMMMG00000014897) CREB1 (ENSMMMG00000014914) METTL21A (ENSMMMG00000015010) Eurasian red squirrel MODERN SPECIES 12 ENSSVLG00005000362 BMPR2 (ENSSVLG00005000484) ENSSVLG00005000534 ENSSVLG00005000554 ENSSVLG00005000579 WDR12 (ENSSVLG00005000598) ENSSVLG00005000686 #10 ENSSVLG00005000784 NBEAL1 (ENSSVLG00005000853) #11 CYP20A1 (ENSSVLG00005000970) #12 ABI2 (ENSSVLG00005001071) #13 CD28 (ENSSVLG00005001473) #17 CTLA4 (ENSSVLG00005001529) #19 ICOS (ENSSVLG00005001570) #20 PARD3B (ENSSVLG00005001789) #21 NRP2 (ENSSVLG00005002141) #22 INO80D (ENSSVLG00005002283) #23 ENSSVLG00005002396 #24 ENSSVLG00005002606 ##25 CMKLR2 (ENSSVLG00005002631) #26 ENSSVLG00005002653 #28 ADAM23 (ENSSVLG00005002721) #29 FAM237A (ENSSVLG00005002854) DYTN (ENSSVLG00005002873) MDH1B (ENSSVLG00005002924) FASTKD2 (ENSSVLG00005002985) CPO (ENSSVLG00005003015) KLF7 (ENSSVLG00005003049) CREB1 (ENSSVLG00005003093) METTL21A (ENSSVLG00005003134) ENSSVLG00005003181 Hystricomorpha ANCESTRAL SPECIES 28 ENSGT00940000154319.v ENSGT00940000153534.A.t.a ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 Naked mole-rat female MODERN SPECIES 17 ENSHGLG00000004722 ENSHGLG00000020889 CARF (ENSHGLG00000007326) #10 ENSHGLG00000037622 NBEAL1 (ENSHGLG00000004471) #11 CYP20A1 (ENSHGLG00000050312) #12 ABI2 (ENSHGLG00000007481) #13 ENSHGLG00000005031 #14 CD28 (ENSHGLG00000037192) #17 CTLA4 (ENSHGLG00000009115) #19 ICOS (ENSHGLG00000008777) #20 ENSHGLG00000043313 ENSHGLG00000016877 ENSHGLG00000048100 PARD3B (ENSHGLG00000004982) #21 NRP2 (ENSHGLG00000010562) #22 ENSHGLG00000049876 INO80D (ENSHGLG00000018537) #23 NDUFS1 (ENSHGLG00000015179) #24 EEF1B2 (ENSHGLG00000015147) ##25 ENSHGLG00000045433 CMKLR2 (ENSHGLG00000046982) #26 ENSHGLG00000044712 #28 ADAM23 (ENSHGLG00000006393) #29 FAM237A (ENSHGLG00000030355) ENSHGLG00000005368 MDH1B (ENSHGLG00000004936) FASTKD2 (ENSHGLG00000004761) ENSHGLG00000045814 KLF7 (ENSHGLG00000044157) ENSHGLG00000017319 Hystricomorpha_a ANCESTRAL SPECIES 67 ENSGT00860000133854 ENSGT00940000154319.v ENSGT00940000153534.A.t.a ENSGT00940000156449 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000159232.h.b Guinea pig MODERN SPECIES 13 SUMO1 (ENSCPOG00000039864) NOP58 (ENSCPOG00000030510) BMPR2 (ENSCPOG00000009586) ICA1L (ENSCPOG00000009349) WDR12 (ENSCPOG00000008824) CARF (ENSCPOG00000008827) #10 NBEAL1 (ENSCPOG00000008009) #11 CYP20A1 (ENSCPOG00000009758) #12 ABI2 (ENSCPOG00000007562) #13 RAPH1 (ENSCPOG00000020239) #14 CD28 (ENSCPOG00000035938) #17 CTLA4 (ENSCPOG00000019534) #19 ICOS (ENSCPOG00000030931) #20 ENSCPOG00000030358 PARD3B (ENSCPOG00000004380) #21 NRP2 (ENSCPOG00000004390) #22 ENSCPOG00000010964 #23 NDUFS1 (ENSCPOG00000005555) #24 EEF1B2 (ENSCPOG00000014496) ##25 ADAM23 (ENSCPOG00000005871) #29 MDH1B (ENSCPOG00000005608) FASTKD2 (ENSCPOG00000005624) KLF7 (ENSCPOG00000009080) CREB1 (ENSCPOG00000010778) METTL21A (ENSCPOG00000034803) ENSCPOG00000035156 FZD5 (ENSCPOG00000038146) PLEKHM3 (ENSCPOG00000004119) CRYGC (ENSCPOG00000000186) ENSCPOG00000022025 CRYGA (ENSCPOG00000015047) Hystricomorpha_b ANCESTRAL SPECIES 52 ENSGT00860000133854 ENSGT00940000154319.v ENSGT00940000153534.A.t.a ENSGT00940000156449 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000159232.h.b Long-tailed chinchilla MODERN SPECIES 164 ICA1L (ENSCLAG00000005015) WDR12 (ENSCLAG00000004491) CARF (ENSCLAG00000007915) #10 ENSCLAG00000007700 ENSCLAG00000006700 NBEAL1 (ENSCLAG00000005102) #11 CYP20A1 (ENSCLAG00000004163) #12 ENSCLAG00000006025 ENSCLAG00000004760 ABI2 (ENSCLAG00000004021) #13 ENSCLAG00000003175 #14 CD28 (ENSCLAG00000004670) #17 CTLA4 (ENSCLAG00000004042) #19 ICOS (ENSCLAG00000003964) #20 PARD3B (ENSCLAG00000010240) #21 NRP2 (ENSCLAG00000009120) #22 INO80D (ENSCLAG00000006191) #23 NDUFS1 (ENSCLAG00000009634) #24 EEF1B2 (ENSCLAG00000009181) ##25 CMKLR2 (ENSCLAG00000008973) #26 ENSCLAG00000008490 ATXN3L (ENSCLAG00000005825) ADAM23 (ENSCLAG00000004674) #29 DYTN (ENSCLAG00000003705) MDH1B (ENSCLAG00000003385) FASTKD2 (ENSCLAG00000007036) KLF7 (ENSCLAG00000006083) CREB1 (ENSCLAG00000005853) METTL21A (ENSCLAG00000005572) ENSCLAG00000005432 ENSCLAG00000004502 Degu MODERN SPECIES 57 ENSODEG00000009897 ENSODEG00000011455 WDR12 (ENSODEG00000011602) CARF (ENSODEG00000011312) #10 NBEAL1 (ENSODEG00000010440) #11 CYP20A1 (ENSODEG00000010253) #12 ENSODEG00000009779 ABI2 (ENSODEG00000009457) #13 ENSODEG00000013477 #14 CTLA4 (ENSODEG00000009327) #19 ENSODEG00000010295 ICOS (ENSODEG00000011327) #20 ENSODEG00000009131 ENSODEG00000010021 PARD3B (ENSODEG00000012523) #21 ENSODEG00000010455 #22 INO80D (ENSODEG00000009769) #23 ENSODEG00000019630 ENSODEG00000008842 #24 ENSODEG00000009030 #24 ENSODEG00000008974 #24 ENSODEG00000010229 ##25 ENSODEG00000019757 ADAM23 (ENSODEG00000011161) #29 DYTN (ENSODEG00000009029) MDH1B (ENSODEG00000009494) FASTKD2 (ENSODEG00000009880) KLF7 (ENSODEG00000010345) ENSODEG00000009956 ENSODEG00000009302 CREB1 (ENSODEG00000010264) Laurasiatheria ANCESTRAL SPECIES 12 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Eulipotyphla ANCESTRAL SPECIES 1829 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 Hedgehog MODERN SPECIES 1961 NRP2 (ENSEEUG00000012888) #22 Common shrew MODERN SPECIES 1244 PARD3B (ENSSARG00000010690) #21 NRP2 (ENSSARG00000010738) #22 Laurasiatheria_a ANCESTRAL SPECIES 16 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Artiodactyla ANCESTRAL SPECIES 13 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Suina ANCESTRAL SPECIES 3 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Chacoan peccary MODERN SPECIES 91 SUMO1 (ENSCWAG00000016775) NOP58 (ENSCWAG00000016884) BMPR2 (ENSCWAG00000016944) FAM117B (ENSCWAG00000017046) ICA1L (ENSCWAG00000017108) WDR12 (ENSCWAG00000017209) CARF (ENSCWAG00000017264) #10 NBEAL1 (ENSCWAG00000017563) #11 CYP20A1 (ENSCWAG00000017608) #12 ABI2 (ENSCWAG00000017671) #13 RAPH1 (ENSCWAG00000018090) #14 CD28 (ENSCWAG00000020352) #17 CTLA4 (ENSCWAG00000020380) #19 ICOS (ENSCWAG00000020408) #20 PARD3B (ENSCWAG00000020460) #21 NRP2 (ENSCWAG00000020581) #22 INO80D (ENSCWAG00000020612) #23 ENSCWAG00000020619 NDUFS1 (ENSCWAG00000020647) #24 EEF1B2 (ENSCWAG00000020782) ##25 CMKLR2 (ENSCWAG00000020796) #26 ENSCWAG00000020804 #28 ENSCWAG00000020821 Pig MODERN SPECIES 6 BMPR2 (ENSSSCG00000016113) FAM117B (ENSSSCG00000016114) ENSSSCG00000043400 ICA1L (ENSSSCG00000016115) WDR12 (ENSSSCG00000016116) CARF (ENSSSCG00000016117) #10 NBEAL1 (ENSSSCG00000016118) #11 CYP20A1 (ENSSSCG00000055761) #12 ABI2 (ENSSSCG00000034630) #13 ENSSSCG00000016119 #14 CD28 (ENSSSCG00000028561) #17 CTLA4 (ENSSSCG00000016122) #19 ICOS (ENSSSCG00000025042) #20 PARD3B (ENSSSCG00000016123) #21 ENSSSCG00000055400 NRP2 (ENSSSCG00000026383) #22 INO80D (ENSSSCG00000016125) #23 NDUFS1 (ENSSSCG00000016127) #24 EEF1B2 (ENSSSCG00000016128) ##25 CMKLR2 (ENSSSCG00000016129) #26 ZDBF2 (ENSSSCG00000016130) #28 ADAM23 (ENSSSCG00000016131) #29 FAM237A (ENSSSCG00000036691) DYTN (ENSSSCG00000035158) MDH1B (ENSSSCG00000016133) FASTKD2 (ENSSSCG00000016134) CPO (ENSSSCG00000016135) KLF7 (ENSSSCG00000029998) ENSSSCG00000042730 CREB1 (ENSSSCG00000034395) METTL21A (ENSSSCG00000036466) Artiodactyla_a ANCESTRAL SPECIES 13 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Artiodactyla_b ANCESTRAL SPECIES 12 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Cetacea ANCESTRAL SPECIES 14 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00390000001958.n.a.g ENSGT00940000154453.b.b Odontoceti ANCESTRAL SPECIES 13 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00390000001958.n.a.g ENSGT00390000004738.q.b Odontoceti_a ANCESTRAL SPECIES 10 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00390000001958.n.a.g ENSGT00940000154453.b.b Odontoceti_b ANCESTRAL SPECIES 12 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00960000190610 ENSGT00440000037606.b #28 ENSGT00910000144184.r.a.a.a.a ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 Monodontidae ANCESTRAL SPECIES 10 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00950000183010.a.b.a.a.b ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00960000190610 ENSGT00440000037606.b #28 ENSGT00910000144184.r.a.a.a.a ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 Narwhal MODERN SPECIES 302 FAM117B (ENSMMNG00015007345) ICA1L (ENSMMNG00015007312) WDR12 (ENSMMNG00015007273) CARF (ENSMMNG00015007132) #10 NBEAL1 (ENSMMNG00015007045) #11 CYP20A1 (ENSMMNG00015007001) #12 ABI2 (ENSMMNG00015006963) #13 RAPH1 (ENSMMNG00015006494) #14 ENSMMNG00015006290 CD28 (ENSMMNG00015006278) #17 CTLA4 (ENSMMNG00015006260) #19 ICOS (ENSMMNG00015006232) #20 ENSMMNG00015006206 ENSMMNG00015006192 PARD3B (ENSMMNG00015005987) #21 NRP2 (ENSMMNG00015005855) #22 INO80D (ENSMMNG00015005802) #23 NDUFS1 (ENSMMNG00015005695) #24 EEF1B2 (ENSMMNG00015005617) ##25 CMKLR2 (ENSMMNG00015005602) #26 ENSMMNG00015005593 ZDBF2 (ENSMMNG00015005582) #28 ENSMMNG00015005570 ADAM23 (ENSMMNG00015005478) #29 FAM237A (ENSMMNG00015005439) DYTN (ENSMMNG00015005422) MDH1B (ENSMMNG00015005351) FASTKD2 (ENSMMNG00015005336) KLF7 (ENSMMNG00015005320) CREB1 (ENSMMNG00015005293) METTL21A (ENSMMNG00015005268) Beluga whale MODERN SPECIES 84 ICA1L (ENSDLEG00000018321) WDR12 (ENSDLEG00000018347) CARF (ENSDLEG00000018361) #10 NBEAL1 (ENSDLEG00000018755) #11 ENSDLEG00000020428 #13 ENSDLEG00000008100 #13 RAPH1 (ENSDLEG00000008223) #14 ENSDLEG00000008980 ENSDLEG00000009004 #17 CTLA4 (ENSDLEG00000009020) #19 ICOS (ENSDLEG00000009050) #20 ENSDLEG00000009073 ENSDLEG00000009090 ENSDLEG00000009108 PARD3B (ENSDLEG00000009127) #21 NRP2 (ENSDLEG00000009192) #22 INO80D (ENSDLEG00000009298) #23 NDUFS1 (ENSDLEG00000009340) #24 EEF1B2 (ENSDLEG00000009390) ##25 GPR1 (ENSDLEG00000009434) #26 ENSDLEG00000009440 ZDBF2 (ENSDLEG00000009453) #28 ADAM23 (ENSDLEG00000009497) #29 FAM237A (ENSDLEG00000009620) DYTN (ENSDLEG00000009655) MDH1B (ENSDLEG00000009773) FASTKD2 (ENSDLEG00000009822) KLF7 (ENSDLEG00000009871) CREB1 (ENSDLEG00000009895) METTL21A (ENSDLEG00000009925) ENSDLEG00000009942 Vaquita MODERN SPECIES 18 SUMO1 (ENSPSNG00000012848) NOP58 (ENSPSNG00000012735) BMPR2 (ENSPSNG00000012669) FAM117B (ENSPSNG00000012551) ICA1L (ENSPSNG00000012492) WDR12 (ENSPSNG00000012441) CARF (ENSPSNG00000011886) #10 NBEAL1 (ENSPSNG00000011649) #11 CYP20A1 (ENSPSNG00000011532) #12 ABI2 (ENSPSNG00000011330) #13 RAPH1 (ENSPSNG00000009801) #14 ENSPSNG00000009309 #17 CTLA4 (ENSPSNG00000009249) #19 ICOS (ENSPSNG00000009099) #20 PARD3B (ENSPSNG00000008898) #21 NRP2 (ENSPSNG00000008707) #22 ENSPSNG00000008614 INO80D (ENSPSNG00000008590) #23 NDUFS1 (ENSPSNG00000008252) #24 EEF1B2 (ENSPSNG00000008153) ##25 CMKLR2 (ENSPSNG00000008130) #26 ENSPSNG00000008115 ZDBF2 (ENSPSNG00000008096) #28 ENSPSNG00000008082 ADAM23 (ENSPSNG00000007702) #29 FAM237A (ENSPSNG00000022142) DYTN (ENSPSNG00000022128) MDH1B (ENSPSNG00000022108) FASTKD2 (ENSPSNG00000022088) KLF7 (ENSPSNG00000022054) CREB1 (ENSPSNG00000022021) Dolphin MODERN SPECIES 6557 NRP2 (ENSTTRG00000014816) #22 Sperm whale MODERN SPECIES 11 BMPR2 (ENSPCTG00005003518) FAM117B (ENSPCTG00005003547) ICA1L (ENSPCTG00005003564) WDR12 (ENSPCTG00005003584) CARF (ENSPCTG00005003645) #10 NBEAL1 (ENSPCTG00005003780) #11 CYP20A1 (ENSPCTG00005003802) #12 ABI2 (ENSPCTG00005003833) #13 RAPH1 (ENSPCTG00005003938) #14 ENSPCTG00005005119 #17 CTLA4 (ENSPCTG00005005168) #19 ICOS (ENSPCTG00005005246) #20 ENSPCTG00005005318 ENSPCTG00005005328 PARD3B (ENSPCTG00005005375) #21 NRP2 (ENSPCTG00005005530) #22 ENSPCTG00005006370 INO80D (ENSPCTG00005006389) #23 ENSPCTG00005006412 NDUFS1 (ENSPCTG00005006448) #24 EEF1B2 (ENSPCTG00005006746) ##25 GPR1 (ENSPCTG00005006803) #26 ZDBF2 (ENSPCTG00005006840) #28 ADAM23 (ENSPCTG00005007031) #29 FAM237A (ENSPCTG00005007294) DYTN (ENSPCTG00005007310) MDH1B (ENSPCTG00005007378) FASTKD2 (ENSPCTG00005004965) KLF7 (ENSPCTG00005005002) CREB1 (ENSPCTG00005005085) METTL21A (ENSPCTG00005005122) Blue whale MODERN SPECIES 18 FAM117B (ENSBMSG00010006217) ICA1L (ENSBMSG00010006262) WDR12 (ENSBMSG00010006329) CARF (ENSBMSG00010006417) #10 ENSBMSG00010006579 #11 ENSBMSG00010006612 #11 CYP20A1 (ENSBMSG00010006657) #12 ABI2 (ENSBMSG00010006723) #13 ENSBMSG00010000193 #17 ENSBMSG00010000215 #17 ENSBMSG00010000230 ENSBMSG00010000252 ICOS (ENSBMSG00010000278) #20 ENSBMSG00010000353 PARD3B (ENSBMSG00010000409) #21 NRP2 (ENSBMSG00010000535) #22 ENSBMSG00010001002 INO80D (ENSBMSG00010001021) #23 ENSBMSG00010001036 NDUFS1 (ENSBMSG00010001085) #24 EEF1B2 (ENSBMSG00010001199) ##25 CMKLR2 (ENSBMSG00010001229) #26 ZDBF2 (ENSBMSG00010001246) #28 ADAM23 (ENSBMSG00010001305) #29 FAM237A (ENSBMSG00010001408) DYTN (ENSBMSG00010001424) MDH1B (ENSBMSG00010001465) FASTKD2 (ENSBMSG00010001509) KLF7 (ENSBMSG00010001534) CREB1 (ENSBMSG00010001606) METTL21A (ENSBMSG00010001644) Pecora ANCESTRAL SPECIES 16 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.u.a.a.b.a ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Percora_a ANCESTRAL SPECIES 5 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.u.a.a.b.a ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Bovidae ANCESTRAL SPECIES 8 ENSGT00940000154319.v.cb ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.u.a.a.b.a ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Bovinae ANCESTRAL SPECIES 5 ENSGT00940000154319.v.cb ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.u.a.a.b.a ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Bos ANCESTRAL SPECIES 6 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.u.a.a.b.a ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Bos_b ANCESTRAL SPECIES 3 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT01100000263480.a.a.b.a.a.a.b.b.a.a.a.a.a.a ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.u.a.a.b.a ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00510000047245.w.a.a.b ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 Cow MODERN SPECIES 11 CARF (ENSBTAG00000016000) #10 ENSBTAG00000019994 NBEAL1 (ENSBTAG00000014469) #11 CYP20A1 (ENSBTAG00000000851) #12 ABI2 (ENSBTAG00000011017) #13 RAPH1 (ENSBTAG00000027201) #14 CD28 (ENSBTAG00000007445) #17 ENSBTAG00000051061 CTLA4 (ENSBTAG00000013170) #19 ICOS (ENSBTAG00000021596) #20 ENSBTAG00000040367 ENSBTAG00000051630 ENSBTAG00000049320 PARD3B (ENSBTAG00000010293) #21 ENSBTAG00000053833 #21 NRP2 (ENSBTAG00000011971) #22 INO80D (ENSBTAG00000014407) #23 ENSBTAG00000055132 NDUFS1 (ENSBTAG00000021976) #24 EEF1B2 (ENSBTAG00000021979) ##25 CMKLR2 (ENSBTAG00000017043) #26 ZDBF2 (ENSBTAG00000031166) #28 ADAM23 (ENSBTAG00000019694) #29 ENSBTAG00000055316 FAM237A (ENSBTAG00000050134) DYTN (ENSBTAG00000046454) MDH1B (ENSBTAG00000016192) FASTKD2 (ENSBTAG00000016193) CPO (ENSBTAG00000019190) KLF7 (ENSBTAG00000044097) CREB1 (ENSBTAG00000005474) Hybrid Bos Indicus MODERN SPECIES 11 BMPR2 (ENSBIXG00005031582) FAM117B (ENSBIXG00005031583) ICA1L (ENSBIXG00005031584) WDR12 (ENSBIXG00005031585) CARF (ENSBIXG00005031586) #10 ENSBIXG00005031587 NBEAL1 (ENSBIXG00005031588) #11 CYP20A1 (ENSBIXG00005031589) #12 ABI2 (ENSBIXG00005031590) #13 RAPH1 (ENSBIXG00005031591) #14 CD28 (ENSBIXG00005031593) #17 CTLA4 (ENSBIXG00005031594) #19 ICOS (ENSBIXG00005031595) #20 PARD3B (ENSBIXG00005031598) #21 ENSBIXG00005031599 NRP2 (ENSBIXG00005031600) #22 INO80D (ENSBIXG00005031603) #23 ENSBIXG00005031604 NDUFS1 (ENSBIXG00005031605) #24 ENSBIXG00005031606 ##25 CMKLR2 (ENSBIXG00005031611) #26 ZDBF2 (ENSBIXG00005031612) #28 ADAM23 (ENSBIXG00005031613) #29 ENSBIXG00005031614 DYTN (ENSBIXG00005031615) MDH1B (ENSBIXG00005031616) FASTKD2 (ENSBIXG00005031617) CPO (ENSBIXG00005031618) KLF7 (ENSBIXG00005031620) ENSBIXG00005031623 CREB1 (ENSBIXG00005031624) Bos_a ANCESTRAL SPECIES 4 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.u.a.a.b.a ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00510000047245.w.a.a.b ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 Wild yak MODERN SPECIES 1701 ENSBMUG00000019977 #21 NRP2 (ENSBMUG00000019949) #22 INO80D (ENSBMUG00000019906) #23 NDUFS1 (ENSBMUG00000019884) #24 ENSBMUG00000019833 ##25 CMKLR2 (ENSBMUG00000019826) #26 Domestic yak MODERN SPECIES 11 ICA1L (ENSBGRG00000016892) WDR12 (ENSBGRG00000016744) ENSBGRG00000016729 CARF (ENSBGRG00000016286) #10 ENSBGRG00000016261 NBEAL1 (ENSBGRG00000016043) #11 CYP20A1 (ENSBGRG00000015562) #12 ABI2 (ENSBGRG00000014834) #13 ENSBGRG00000012733 #14 CD28 (ENSBGRG00000012545) #17 CTLA4 (ENSBGRG00000012384) #19 ENSBGRG00000012357 ICOS (ENSBGRG00000012246) #20 ENSBGRG00000012209 PARD3B (ENSBGRG00000011721) #21 NRP2 (ENSBGRG00000010098) #22 ENSBGRG00000010010 INO80D (ENSBGRG00000009960) #23 NDUFS1 (ENSBGRG00000009516) #24 ENSBGRG00000009445 ##25 CMKLR2 (ENSBGRG00000009401) #26 ZDBF2 (ENSBGRG00000009322) #28 ENSBGRG00000009270 ADAM23 (ENSBGRG00000008490) #29 FAM237A (ENSBGRG00000008425) MDH1B (ENSBGRG00000008141) FASTKD2 (ENSBGRG00000008051) CPO (ENSBGRG00000007969) ENSBGRG00000007943 KLF7 (ENSBGRG00000007842) CREB1 (ENSBGRG00000007627) American bison MODERN SPECIES 3330 NOP58 (ENSBBBG00000012170) BMPR2 (ENSBBBG00000012144) ENSBBBG00000002273 ENSBBBG00000012094 ICA1L (ENSBBBG00000012090) WDR12 (ENSBBBG00000012064) CARF (ENSBBBG00000012044) #10 NBEAL1 (ENSBBBG00000011985) #11 CYP20A1 (ENSBBBG00000002236) #12 ABI2 (ENSBBBG00000011940) #13 ENSBBBG00000011830 #14 CD28 (ENSBBBG00000002157) #17 CTLA4 (ENSBBBG00000002155) #19 ICOS (ENSBBBG00000011656) #20 PARD3B (ENSBBBG00000011555) #21 NRP2 (ENSBBBG00000011269) #22 INO80D (ENSBBBG00000011164) #23 NDUFS1 (ENSBBBG00000011148) #24 ENSBBBG00000011052 ##25 CMKLR2 (ENSBBBG00000011031) #26 ZDBF2 (ENSBBBG00000011029) #28 ADAM23 (ENSBBBG00000011005) #29 FAM237A (ENSBBBG00000010954) DYTN (ENSBBBG00000010949) MDH1B (ENSBBBG00000010925) FASTKD2 (ENSBBBG00000010905) CPO (ENSBBBG00000010898) ENSBBBG00000010890 KLF7 (ENSBBBG00000010885) CREB1 (ENSBBBG00000010873) METTL21A (ENSBBBG00000010854) Caprinae ANCESTRAL SPECIES 5 ENSGT00940000154319.v.cb ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.u.a.a.b.b ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Goat MODERN SPECIES 11 NOP58 (ENSCHIG00000025013) BMPR2 (ENSCHIG00000020243) FAM117B (ENSCHIG00000014630) ICA1L (ENSCHIG00000013077) WDR12 (ENSCHIG00000009469) CARF (ENSCHIG00000023655) #10 ENSCHIG00000016764 NBEAL1 (ENSCHIG00000000921) #11 CYP20A1 (ENSCHIG00000022946) #12 ABI2 (ENSCHIG00000002652) #13 RAPH1 (ENSCHIG00000025930) #14 CD28 (ENSCHIG00000024564) #17 CTLA4 (ENSCHIG00000008042) #19 ICOS (ENSCHIG00000024943) #20 PARD3B (ENSCHIG00000007723) #21 NRP2 (ENSCHIG00000016092) #22 INO80D (ENSCHIG00000010718) #23 NDUFS1 (ENSCHIG00000014971) #24 EEF1B2 (ENSCHIG00000026794) ##25 CMKLR2 (ENSCHIG00000007661) #26 ZDBF2 (ENSCHIG00000022575) #28 ADAM23 (ENSCHIG00000011689) #29 FAM237A (ENSCHIG00000010865) DYTN (ENSCHIG00000016602) MDH1B (ENSCHIG00000022560) FASTKD2 (ENSCHIG00000015121) ENSCHIG00000003872 ENSCHIG00000026347 CPO (ENSCHIG00000020644) KLF7 (ENSCHIG00000006619) CREB1 (ENSCHIG00000027161) Rambouillet Sheep MODERN SPECIES 11 NOP58 (ENSOARG00020023408) BMPR2 (ENSOARG00020006563) FAM117B (ENSOARG00020006688) ICA1L (ENSOARG00020006778) WDR12 (ENSOARG00020006896) CARF (ENSOARG00020006968) #10 NBEAL1 (ENSOARG00020007440) #11 CYP20A1 (ENSOARG00020007538) #12 ABI2 (ENSOARG00020007596) #13 RAPH1 (ENSOARG00020007863) #14 ENSOARG00020008167 CD28 (ENSOARG00020008197) #17 CTLA4 (ENSOARG00020008302) #19 ICOS (ENSOARG00020008420) #20 PARD3B (ENSOARG00020008587) #21 NRP2 (ENSOARG00020013172) #22 ENSOARG00020013371 INO80D (ENSOARG00020013391) #23 NDUFS1 (ENSOARG00020013502) #24 ENSOARG00020014163 ##25 GPR1 (ENSOARG00020014248) #26 ZDBF2 (ENSOARG00020014286) #28 ADAM23 (ENSOARG00020014405) #29 FAM237A (ENSOARG00020014982) DYTN (ENSOARG00020015031) MDH1B (ENSOARG00020015160) FASTKD2 (ENSOARG00020015403) CPO (ENSOARG00020015466) KLF7 (ENSOARG00020015555) CREB1 (ENSOARG00020015664) METTL21A (ENSOARG00020015859) Siberian musk deer MODERN SPECIES 352 CD28 (ENSMMSG00000016228) #17 CTLA4 (ENSMMSG00000016291) #19 ICOS (ENSMMSG00000016369) #20 ENSMMSG00000016441 PARD3B (ENSMMSG00000016488) #21 NRP2 (ENSMMSG00000016704) #22 INO80D (ENSMMSG00000016888) #23 NDUFS1 (ENSMMSG00000016943) #24 ENSMMSG00000017130 ##25 ZDBF2 (ENSMMSG00000017183) #28 ADAM23 (ENSMMSG00000017291) #29 FAM237A (ENSMMSG00000017572) DYTN (ENSMMSG00000017587) MDH1B (ENSMMSG00000017649) FASTKD2 (ENSMMSG00000017717) CPO (ENSMMSG00000017798) KLF7 (ENSMMSG00000017874) ENSMMSG00000017910 CREB1 (ENSMMSG00000017935) ENSMMSG00000017981 ENSMMSG00000018078 Yarkand deer MODERN SPECIES 31 ICA1L (ENSCHYG00000003466) WDR12 (ENSCHYG00000003428) ENSCHYG00000003419 CARF (ENSCHYG00000003336) #10 NBEAL1 (ENSCHYG00000003290) #11 CYP20A1 (ENSCHYG00000003265) #12 ENSCHYG00000003256 ABI2 (ENSCHYG00000003231) #13 RAPH1 (ENSCHYG00000002595) #14 CD28 (ENSCHYG00000002432) #17 CTLA4 (ENSCHYG00000002394) #19 ICOS (ENSCHYG00000002371) #20 ENSCHYG00000002349 ENSCHYG00000002345 PARD3B (ENSCHYG00000002220) #21 NRP2 (ENSCHYG00000002124) #22 ENSCHYG00000002093 INO80D (ENSCHYG00000002072) #23 NDUFS1 (ENSCHYG00000001983) #24 ENSCHYG00000001947 ##25 ENSCHYG00000001938 CMKLR2 (ENSCHYG00000001927) #26 ZDBF2 (ENSCHYG00000001897) #28 ADAM23 (ENSCHYG00000001792) #29 FAM237A (ENSCHYG00000001756) DYTN (ENSCHYG00000001729) ENSCHYG00000001715 MDH1B (ENSCHYG00000001680) FASTKD2 (ENSCHYG00000001648) CPO (ENSCHYG00000001618) KLF7 (ENSCHYG00000001583) Camelidae ANCESTRAL SPECIES 58 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Alpaca MODERN SPECIES 2771 BMPR2 (ENSVPAG00000009496) ENSVPAG00000009497 ICA1L (ENSVPAG00000009498) WDR12 (ENSVPAG00000009500) CARF (ENSVPAG00000009501) #10 ENSVPAG00000009502 #11 ENSVPAG00000009503 #11 CYP20A1 (ENSVPAG00000009505) #12 ABI2 (ENSVPAG00000009506) #13 RAPH1 (ENSVPAG00000009507) #14 CD28 (ENSVPAG00000009510) #17 ICOS (ENSVPAG00000009512) #20 PARD3B (ENSVPAG00000009514) #21 ENSVPAG00000009518 #22 Arabian camel MODERN SPECIES 31 NOP58 (ENSCDRG00005019373) ENSCDRG00005019360 BMPR2 (ENSCDRG00005019320) ENSCDRG00005019289 ENSCDRG00005019283 ICA1L (ENSCDRG00005019255) WDR12 (ENSCDRG00005019221) CARF (ENSCDRG00005019098) #10 NBEAL1 (ENSCDRG00005019031) #11 ABI2 (ENSCDRG00005018744) #13 ENSCDRG00005018577 #14 CD28 (ENSCDRG00005018484) #17 CTLA4 (ENSCDRG00005018448) #19 ICOS (ENSCDRG00005018420) #20 PARD3B (ENSCDRG00005018074) #21 NRP2 (ENSCDRG00005017938) #22 INO80D (ENSCDRG00005017847) #23 NDUFS1 (ENSCDRG00005017509) #24 EEF1B2 (ENSCDRG00005017418) ##25 CMKLR2 (ENSCDRG00005017405) #26 ZDBF2 (ENSCDRG00005017378) #28 ADAM23 (ENSCDRG00005016801) #29 FAM237A (ENSCDRG00005016730) DYTN (ENSCDRG00005016665) MDH1B (ENSCDRG00005016545) FASTKD2 (ENSCDRG00005016506) CPO (ENSCDRG00005016423) KLF7 (ENSCDRG00005016375) CREB1 (ENSCDRG00005016249) METTL21A (ENSCDRG00005016143) ENSCDRG00005016106 Laurasiatheria_b ANCESTRAL SPECIES 16 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00940000153064.b.d ENSGT01050000244818.s.a ENSGT01090000260046 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Laurasiatheria_c ANCESTRAL SPECIES 18 ENSGT00940000153534.A ENSGT01090000263468 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b Equus ANCESTRAL SPECIES 18 ENSGT00940000153534.A ENSGT01090000263468 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.g.b.b ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b ENSGT00940000162639 Horse MODERN SPECIES 9 NOP58 (ENSECAG00000024696) BMPR2 (ENSECAG00000025141) ENSECAG00000054476 FAM117B (ENSECAG00000004249) ICA1L (ENSECAG00000009288) WDR12 (ENSECAG00000009547) CARF (ENSECAG00000017624) #10 NBEAL1 (ENSECAG00000020049) #11 CYP20A1 (ENSECAG00000010884) #12 ABI2 (ENSECAG00000018236) #13 ENSECAG00000022376 #14 CD28 (ENSECAG00000022853) #17 CTLA4 (ENSECAG00000003996) #19 ICOS (ENSECAG00000006253) #20 PARD3B (ENSECAG00000008768) #21 NRP2 (ENSECAG00000016824) #22 INO80D (ENSECAG00000015076) #23 NDUFS1 (ENSECAG00000015914) #24 EEF1B2 (ENSECAG00000016653) ##25 CMKLR2 (ENSECAG00000004408) #26 ZDBF2 (ENSECAG00000039959) #28 ADAM23 (ENSECAG00000018514) #29 FAM237A (ENSECAG00000050449) DYTN (ENSECAG00000006820) MDH1B (ENSECAG00000007491) FASTKD2 (ENSECAG00000008822) KLF7 (ENSECAG00000012215) CREB1 (ENSECAG00000013667) METTL21A (ENSECAG00000017536) PLEKHM3 (ENSECAG00000008108) FZD5 (ENSECAG00000007309) Donkey MODERN SPECIES 24 ENSEASG00005028104 BMPR2 (ENSEASG00005002457) FAM117B (ENSEASG00005031822) ICA1L (ENSEASG00005002554) ENSEASG00005027147 WDR12 (ENSEASG00005002567) CARF (ENSEASG00005002591) #10 NBEAL1 (ENSEASG00005002684) #11 CYP20A1 (ENSEASG00005002770) #12 ABI2 (ENSEASG00005002778) #13 ENSEASG00005002800 #14 CD28 (ENSEASG00005002842) #17 CTLA4 (ENSEASG00005002849) #19 ICOS (ENSEASG00005002854) #20 PARD3B (ENSEASG00005002870) #21 NRP2 (ENSEASG00005002875) #22 INO80D (ENSEASG00005002880) #23 NDUFS1 (ENSEASG00005002883) #24 EEF1B2 (ENSEASG00005026194) ##25 CMKLR2 (ENSEASG00005002916) #26 ZDBF2 (ENSEASG00005023969) #28 ADAM23 (ENSEASG00005002928) #29 FAM237A (ENSEASG00005002935) DYTN (ENSEASG00005002938) MDH1B (ENSEASG00005002948) FASTKD2 (ENSEASG00005002958) KLF7 (ENSEASG00005002973) CREB1 (ENSEASG00005002983) ENSEASG00005024979 CCNYL1 (ENSEASG00005003014) FZD5 (ENSEASG00005003041) Chiroptera ANCESTRAL SPECIES 11 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Megabat MODERN SPECIES 152 NRP2 (ENSPVAG00000006389) #22 INO80D (ENSPVAG00000006390) #23 Microchiroptera ANCESTRAL SPECIES 15 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a Greater horseshoe bat MODERN SPECIES 26 NOP58 (ENSRFEG00010014939) RPL39_1 (ENSRFEG00010014922) BMPR2 (ENSRFEG00010014707) FAM117B (ENSRFEG00010014554) ICA1L (ENSRFEG00010014466) WDR12 (ENSRFEG00010014405) CARF (ENSRFEG00010013855) #10 NBEAL1 (ENSRFEG00010013724) #11 CYP20A1 (ENSRFEG00010013600) #12 ABI2 (ENSRFEG00010013372) #13 RAPH1 (ENSRFEG00010013239) #14 CD28 (ENSRFEG00010013138) #17 ENSRFEG00010013108 #19 ICOS (ENSRFEG00010013045) #20 PARD3B (ENSRFEG00010012777) #21 NRP2 (ENSRFEG00010012560) #22 INO80D (ENSRFEG00010012508) #23 NDUFS1 (ENSRFEG00010011973) #24 EEF1B2 (ENSRFEG00010011873) ##25 CMKLR2 (ENSRFEG00010011856) #26 ENSRFEG00010011751 #28 ADAM23 (ENSRFEG00010010998) #29 FAM237A (ENSRFEG00010010918) DYTN (ENSRFEG00010010740) MDH1B (ENSRFEG00010010537) FASTKD2 (ENSRFEG00010010475) CPO (ENSRFEG00010010427) KLF7 (ENSRFEG00010010310) CREB1 (ENSRFEG00010020193) ENSRFEG00010020167 METTL21A (ENSRFEG00010020119) Microbat MODERN SPECIES 940 WDR12 (ENSMLUG00000025847) CARF (ENSMLUG00000007015) #10 NBEAL1 (ENSMLUG00000007434) #11 CYP20A1 (ENSMLUG00000014996) #12 ABI2 (ENSMLUG00000008117) #13 RAPH1 (ENSMLUG00000008162) #14 CD28 (ENSMLUG00000004329) #17 CTLA4 (ENSMLUG00000009619) #19 ICOS (ENSMLUG00000009627) #20 ENSMLUG00000024002 ENSMLUG00000025717 #21 ENSMLUG00000013841 #21 ENSMLUG00000026514 ENSMLUG00000022709 #21 ENSMLUG00000028553 #21 NRP2 (ENSMLUG00000013862) #22 INO80D (ENSMLUG00000007714) #23 NDUFS1 (ENSMLUG00000016594) #24 ENSMLUG00000016602 ##25 CMKLR2 (ENSMLUG00000016607) #26 ENSMLUG00000023597 ZDBF2 (ENSMLUG00000014265) #28 ADAM23 (ENSMLUG00000009364) #29 FAM237A (ENSMLUG00000030140) DYTN (ENSMLUG00000028179) MDH1B (ENSMLUG00000009390) FASTKD2 (ENSMLUG00000009411) CPO (ENSMLUG00000009428) KLF7 (ENSMLUG00000009436) CREB1 (ENSMLUG00000016119) METTL21A (ENSMLUG00000015747) Carnivora ANCESTRAL SPECIES 17 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00940000157820.a.a ENSGT00530000063873.A #17 ENSGT01090000260046 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Felidae ANCESTRAL SPECIES 15 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00940000157820.a.a ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.o ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Panthera ANCESTRAL SPECIES 9 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00520000059926.a.b ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.o ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Panthera_a ANCESTRAL SPECIES 6 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00520000059926.a.b ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.o ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b leopard MODERN SPECIES 12 NBEAL1 (ENSPPRG00000024650) #11 CYP20A1 (ENSPPRG00000024582) #12 ABI2 (ENSPPRG00000024330) #13 ENSPPRG00000023758 #14 CD28 (ENSPPRG00000023378) #17 CTLA4 (ENSPPRG00000023337) #19 ICOS (ENSPPRG00000023149) #20 ENSPPRG00000020852 PARD3B (ENSPPRG00000001193) #21 NRP2 (ENSPPRG00000001684) #22 INO80D (ENSPPRG00000001843) #23 NDUFS1 (ENSPPRG00000003837) #24 ENSPPRG00000004175 ##25 CMKLR2 (ENSPPRG00000020893) #26 ADAM23 (ENSPPRG00000004864) #29 FAM237A (ENSPPRG00000005451) DYTN (ENSPPRG00000005491) MDH1B (ENSPPRG00000005932) FASTKD2 (ENSPPRG00000006075) CPO (ENSPPRG00000006106) KLF7 (ENSPPRG00000006377) CREB1 (ENSPPRG00000006712) METTL21A (ENSPPRG00000006796) ENSPPRG00000007043 PLEKHM3 (ENSPPRG00000007268) lion MODERN SPECIES 8 NOP58 (ENSPLOG00000011950) BMPR2 (ENSPLOG00000011747) FAM117B (ENSPLOG00000011690) ICA1L (ENSPLOG00000011556) WDR12 (ENSPLOG00000011514) CARF (ENSPLOG00000011224) #10 NBEAL1 (ENSPLOG00000010825) #11 CYP20A1 (ENSPLOG00000010756) #12 ABI2 (ENSPLOG00000010377) #13 ENSPLOG00000010151 #14 CD28 (ENSPLOG00000010049) #17 CTLA4 (ENSPLOG00000010005) #19 ICOS (ENSPLOG00000009959) #20 ENSPLOG00000009936 PARD3B (ENSPLOG00000008780) #21 NRP2 (ENSPLOG00000008415) #22 INO80D (ENSPLOG00000008354) #23 NDUFS1 (ENSPLOG00000008138) #24 ENSPLOG00000008015 ENSPLOG00000007981 ##25 CMKLR2 (ENSPLOG00000007963) #26 ZDBF2 (ENSPLOG00000007898) #28 ENSPLOG00000007877 ADAM23 (ENSPLOG00000007574) #29 FAM237A (ENSPLOG00000007523) DYTN (ENSPLOG00000007459) MDH1B (ENSPLOG00000007375) FASTKD2 (ENSPLOG00000007345) CPO (ENSPLOG00000007242) KLF7 (ENSPLOG00000007130) CREB1 (ENSPLOG00000007090) Tiger MODERN SPECIES 313 BMPR2 (ENSPTIG00000013082) ENSPTIG00000008227 ICA1L (ENSPTIG00000013050) WDR12 (ENSPTIG00000013035) CARF (ENSPTIG00000012946) #10 ENSPTIG00000008218 NBEAL1 (ENSPTIG00000012887) #11 CYP20A1 (ENSPTIG00000012850) #12 ABI2 (ENSPTIG00000012734) #13 ENSPTIG00000012473 #14 CD28 (ENSPTIG00000012428) #17 CTLA4 (ENSPTIG00000012408) #19 ICOS (ENSPTIG00000012385) #20 ENSPTIG00000008211 PARD3B (ENSPTIG00000012297) #21 NRP2 (ENSPTIG00000012139) #22 INO80D (ENSPTIG00000012089) #23 NDUFS1 (ENSPTIG00000012021) #24 ENSPTIG00000011994 ##25 CMKLR2 (ENSPTIG00000008203) #26 ADAM23 (ENSPTIG00000011931) #29 FAM237A (ENSPTIG00000011920) DYTN (ENSPTIG00000011914) MDH1B (ENSPTIG00000011902) FASTKD2 (ENSPTIG00000011891) CPO (ENSPTIG00000011884) KLF7 (ENSPTIG00000011869) CREB1 (ENSPTIG00000011848) METTL21A (ENSPTIG00000011823) ENSPTIG00000011797 PLEKHM3 (ENSPTIG00000011775) Cat MODERN SPECIES 239 FAM117B (ENSFCAG00000046269) ICA1L (ENSFCAG00000008514) WDR12 (ENSFCAG00000026676) CARF (ENSFCAG00000046458) #10 NBEAL1 (ENSFCAG00000025997) #11 ENSFCAG00000027770 ENSFCAG00000048141 CYP20A1 (ENSFCAG00000022927) #12 ABI2 (ENSFCAG00000012982) #13 RAPH1 (ENSFCAG00000019050) #14 ENSFCAG00000034107 CD28 (ENSFCAG00000014271) #17 CTLA4 (ENSFCAG00000014272) #19 ICOS (ENSFCAG00000038001) #20 PARD3B (ENSFCAG00000025870) #21 NRP2 (ENSFCAG00000000423) #22 INO80D (ENSFCAG00000022035) #23 NDUFS1 (ENSFCAG00000023344) #24 EEF1B2 (ENSFCAG00000010239) ##25 CMKLR2 (ENSFCAG00000028762) #26 ZDBF2 (ENSFCAG00000041779) #28 ADAM23 (ENSFCAG00000018551) #29 DYTN (ENSFCAG00000024422) MDH1B (ENSFCAG00000015372) FASTKD2 (ENSFCAG00000015373) CPO (ENSFCAG00000002513) KLF7 (ENSFCAG00000002514) CREB1 (ENSFCAG00000008220) METTL21A (ENSFCAG00000035900) CCNYL1 (ENSFCAG00000028003) ENSFCAG00000039577 Caniformia ANCESTRAL SPECIES 14 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00940000157820.a.a ENSGT00530000063873.A #17 ENSGT01090000260046 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Canidae ANCESTRAL SPECIES 20 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT01090000260046.e.a.a.b ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.q ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Canis_lupus ANCESTRAL SPECIES 32 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000154694.l.b.b.a.a.b ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h.q ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Dingo MODERN SPECIES 398 FAM117B (ENSCAFG00020002101) ICA1L (ENSCAFG00020002040) WDR12 (ENSCAFG00020001958) CARF (ENSCAFG00020001932) #10 ENSCAFG00020001912 NBEAL1 (ENSCAFG00020001831) #11 CYP20A1 (ENSCAFG00020001812) #12 ENSCAFG00020001801 ENSCAFG00020001784 ABI2 (ENSCAFG00020001752) #13 RAPH1 (ENSCAFG00020001630) #14 CD28 (ENSCAFG00020001531) #17 CTLA4 (ENSCAFG00020001506) #19 ICOS (ENSCAFG00020001489) #20 PARD3B (ENSCAFG00020001089) #21 NRP2 (ENSCAFG00020000746) #22 INO80D (ENSCAFG00020000661) #23 NDUFS1 (ENSCAFG00020000642) #24 EEF1B2 (ENSCAFG00020000617) ##25 CMKLR2 (ENSCAFG00020000614) #26 ZDBF2 (ENSCAFG00020000545) #28 ADAM23 (ENSCAFG00020000240) #29 FAM237A (ENSCAFG00020000156) DYTN (ENSCAFG00020027434) MDH1B (ENSCAFG00020027429) FASTKD2 (ENSCAFG00020027426) CPO (ENSCAFG00020027425) KLF7 (ENSCAFG00020027423) CREB1 (ENSCAFG00020027420) METTL21A (ENSCAFG00020027418) ENSCAFG00020027415 Dog MODERN SPECIES 30 WDR12 (ENSCAFG00845015685) CARF (ENSCAFG00845015868) #10 ENSCAFG00845016161 NBEAL1 (ENSCAFG00845016248) #11 CYP20A1 (ENSCAFG00845016438) #12 ENSCAFG00845016541 ABI2 (ENSCAFG00845016661) #13 ENSCAFG00845016782 ENSCAFG00845016818 RAPH1 (ENSCAFG00845017225) #14 ENSCAFG00845017896 CD28 (ENSCAFG00845018097) #17 CTLA4 (ENSCAFG00845018252) #19 ICOS (ENSCAFG00845018403) #20 PARD3B (ENSCAFG00845018916) #21 NRP2 (ENSCAFG00845019968) #22 INO80D (ENSCAFG00845020375) #23 NDUFS1 (ENSCAFG00845020511) #24 EEF1B2 (ENSCAFG00845020822) ##25 GPR1 (ENSCAFG00845020895) #26 ZDBF2 (ENSCAFG00845020911) #28 ADAM23 (ENSCAFG00845021040) #29 FAM237A (ENSCAFG00845021430) DYTN (ENSCAFG00845021457) MDH1B (ENSCAFG00845021551) FASTKD2 (ENSCAFG00845021685) CPO (ENSCAFG00845021788) KLF7 (ENSCAFG00845021900) CREB1 (ENSCAFG00845022020) METTL21A (ENSCAFG00845022171) CCNYL1 (ENSCAFG00845022326) Red fox MODERN SPECIES 41 ICA1L (ENSVVUG00000018171) WDR12 (ENSVVUG00000018074) CARF (ENSVVUG00000017926) #10 ENSVVUG00000017885 #11 NBEAL1 (ENSVVUG00000017646) #11 CYP20A1 (ENSVVUG00000017336) #12 ENSVVUG00000017318 ENSVVUG00000017315 ABI2 (ENSVVUG00000017312) #13 RAPH1 (ENSVVUG00000017063) #14 CD28 (ENSVVUG00000017013) #17 ENSVVUG00000017012 CTLA4 (ENSVVUG00000017009) #19 ICOS (ENSVVUG00000017004) #20 PARD3B (ENSVVUG00000016975) #21 NRP2 (ENSVVUG00000016946) #22 INO80D (ENSVVUG00000016931) #23 NDUFS1 (ENSVVUG00000016918) #24 EEF1B2 (ENSVVUG00000016896) ##25 GPR1 (ENSVVUG00000016890) #26 ZDBF2 (ENSVVUG00000016880) #28 Caniformia_b ANCESTRAL SPECIES 13 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00940000157820.a.a ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Mustelinae ANCESTRAL SPECIES 44 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Ferret MODERN SPECIES 265 FAM117B (ENSMPUG00000000358) ICA1L (ENSMPUG00000000375) WDR12 (ENSMPUG00000000379) CARF (ENSMPUG00000000382) #10 NBEAL1 (ENSMPUG00000000385) #11 ENSMPUG00000000395 #12 ENSMPUG00000000397 #12 ABI2 (ENSMPUG00000000402) #13 RAPH1 (ENSMPUG00000000405) #14 CD28 (ENSMPUG00000000418) #17 CTLA4 (ENSMPUG00000000422) #19 ICOS (ENSMPUG00000000425) #20 ENSMPUG00000000428 ENSMPUG00000000430 ##21 PARD3B (ENSMPUG00000000432) #21 NRP2 (ENSMPUG00000000435) #22 ENSMPUG00000000437 INO80D (ENSMPUG00000000439) #23 NDUFS1 (ENSMPUG00000000442) #24 EEF1B2 (ENSMPUG00000000444) ##25 CMKLR2 (ENSMPUG00000018909) #26 ZDBF2 (ENSMPUG00000000463) #28 ADAM23 (ENSMPUG00000000467) #29 ENSMPUG00000000471 MDH1B (ENSMPUG00000000473) FASTKD2 (ENSMPUG00000000477) CPO (ENSMPUG00000000481) KLF7 (ENSMPUG00000000483) CREB1 (ENSMPUG00000000485) ENSMPUG00000018911 ENSMPUG00000000487 American mink MODERN SPECIES 40 BMPR2 (ENSNVIG00000007469) ENSNVIG00000007447 ENSNVIG00000007441 ICA1L (ENSNVIG00000007376) WDR12 (ENSNVIG00000007326) F6SXV3 (ENSNVIG00000007220) #10 NBEAL1 (ENSNVIG00000007140) #11 CYP20A1 (ENSNVIG00000007093) #12 ABI2 (ENSNVIG00000006920) #13 RAPH1 (ENSNVIG00000006475) #14 ENSNVIG00000006462 CD28 (ENSNVIG00000006426) #17 CTLA4 (ENSNVIG00000006392) #19 ICOS (ENSNVIG00000006380) #20 PARD3B (ENSNVIG00000005889) #21 NRP2 (ENSNVIG00000005651) #22 INO80D (ENSNVIG00000005634) #23 NDUFS1 (ENSNVIG00000005404) #24 EEF1B2 (ENSNVIG00000005362) ##25 GPR1 (ENSNVIG00000005355) #26 ZDBF2 (ENSNVIG00000005326) #28 ADAM23 (ENSNVIG00000005209) #29 FAM237A (ENSNVIG00000005198) DYTN (ENSNVIG00000005190) MDH1B (ENSNVIG00000005145) FASTKD2 (ENSNVIG00000005116) CBPO (ENSNVIG00000005106) KLF7 (ENSNVIG00000005091) CREB1 (ENSNVIG00000005058) METTL21A (ENSNVIG00000005027) ENSNVIG00000005020 Ursidae ANCESTRAL SPECIES 7 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00940000157820.a.a.k ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b Giant Panda MODERN SPECIES 11 BMPR2 (ENSAMEG00000013148) ENSAMEG00000013132 ENSAMEG00000026389 ICA1L (ENSAMEG00000013120) WDR12 (ENSAMEG00000013091) CARF (ENSAMEG00000013068) #10 NBEAL1 (ENSAMEG00000013020) #11 ABI2 (ENSAMEG00000012960) #13 ENSAMEG00000002970 #14 ENSAMEG00000030945 ENSAMEG00000028551 CD28 (ENSAMEG00000002955) #17 CTLA4 (ENSAMEG00000002942) #19 ICOS (ENSAMEG00000002936) #20 PARD3B (ENSAMEG00000002930) #21 NRP2 (ENSAMEG00000003086) #22 INO80D (ENSAMEG00000003072) #23 NDUFS1 (ENSAMEG00000003030) #24 ENSAMEG00000003015 ##25 ZDBF2 (ENSAMEG00000029468) #28 CMKLR2 (ENSAMEG00000003011) #26 ADAM23 (ENSAMEG00000002950) #29 FAM237A (ENSAMEG00000029073) DYTN (ENSAMEG00000025472) MDH1B (ENSAMEG00000002932) FASTKD2 (ENSAMEG00000002917) CPO (ENSAMEG00000015096) KLF7 (ENSAMEG00000015148) CREB1 (ENSAMEG00000015152) METTL21A (ENSAMEG00000015168) ENSAMEG00000015175 Ursus ANCESTRAL SPECIES 4 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00940000157820.a.a.k ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00910000148124 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 Polar bear MODERN SPECIES 142 ENSUMAG00000021893 ENSUMAG00000021898 ICA1L (ENSUMAG00000021899) WDR12 (ENSUMAG00000021904) CARF (ENSUMAG00000021907) #10 ENSUMAG00000021909 #11 NBEAL1 (ENSUMAG00000021925) #11 CYP20A1 (ENSUMAG00000022062) #12 ABI2 (ENSUMAG00000022146) #13 RAPH1 (ENSUMAG00000022157) #14 ENSUMAG00000022213 CD28 (ENSUMAG00000022222) #17 CTLA4 (ENSUMAG00000022223) #19 ICOS (ENSUMAG00000022228) #20 PARD3B (ENSUMAG00000022273) #21 NRP2 (ENSUMAG00000022446) #22 ENSUMAG00000022452 INO80D (ENSUMAG00000022462) #23 NDUFS1 (ENSUMAG00000022473) #24 EEF1B2 (ENSUMAG00000022481) ##25 ZDBF2 (ENSUMAG00000022505) #28 ADAM23 (ENSUMAG00000022533) #29 FAM237A (ENSUMAG00000022571) DYTN (ENSUMAG00000022576) MDH1B (ENSUMAG00000022585) FASTKD2 (ENSUMAG00000022590) CPO (ENSUMAG00000022606) KLF7 (ENSUMAG00000022629) METTL21A (ENSUMAG00000022649) CREB1 (ENSUMAG00000022656) ENSUMAG00000022665 American black bear DUPLICATION American black bear MODERN SPECIES 3124 ENSUAMG00000016631 NRP2 (ENSUAMG00000016625) #22 American black bear MODERN SPECIES 6049 ENSUAMG00000012305 #22 Atlantogenata ANCESTRAL SPECIES 9 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000154453.b.a.b Afrotheria ANCESTRAL SPECIES 1 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 Afrotheria_a ANCESTRAL SPECIES 1 ENSGT00940000154319.v ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a.h ##25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 Elephant MODERN SPECIES 301 ENSLAFG00000020653 #11 ENSLAFG00000015098 #11 CYP20A1 (ENSLAFG00000015110) #12 ABI2 (ENSLAFG00000015117) #13 ENSLAFG00000015135 #14 ENSLAFG00000031357 CD28 (ENSLAFG00000017773) #17 CTLA4 (ENSLAFG00000006654) #19 ICOS (ENSLAFG00000006657) #20 ENSLAFG00000026263 ENSLAFG00000030813 #21 ENSLAFG00000007708 #21 ENSLAFG00000026835 #21 ENSLAFG00000025673 #21 ENSLAFG00000030808 #21 NRP2 (ENSLAFG00000016414) #22 INO80D (ENSLAFG00000015352) #23 NDUFS1 (ENSLAFG00000013782) #24 EEF1B2 (ENSLAFG00000011812) ##25 CMKLR2 (ENSLAFG00000009005) #26 ZDBF2 (ENSLAFG00000014253) #28 ADAM23 (ENSLAFG00000014452) #29 DYTN (ENSLAFG00000032161) MDH1B (ENSLAFG00000015578) FASTKD2 (ENSLAFG00000005198) CPO (ENSLAFG00000009772) KLF7 (ENSLAFG00000005822) CREB1 (ENSLAFG00000013257) METTL21A (ENSLAFG00000017103) ENSLAFG00000021558 FZD5 (ENSLAFG00000017105) Hyrax MODERN SPECIES 1502 NRP2 (ENSPCAG00000005335) #22 Tenrec MODERN SPECIES 1860 NRP2 (ENSETEG00000008308) #22 Xenarthra ANCESTRAL SPECIES 686 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 Armadillo MODERN SPECIES 1677 ENSDNOG00000036872 #21 NRP2 (ENSDNOG00000033847) #22 Sloth MODERN SPECIES 1678 NRP2 (ENSCHOG00000012420) #22 Marsupialia ANCESTRAL SPECIES 8 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000155877 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b Opossum MODERN SPECIES 6 ICA1L (ENSMODG00000016279) WDR12 (ENSMODG00000016275) CARF (ENSMODG00000016272) #10 ENSMODG00000047566 NBEAL1 (ENSMODG00000016268) #11 ENSMODG00000037522 CYP20A1 (ENSMODG00000016255) #12 ABI2 (ENSMODG00000016244) #13 ENSMODG00000016237 #14 CD28 (ENSMODG00000016234) #17 CTLA4 (ENSMODG00000016230) #19 ENSMODG00000025487 #20 ENSMODG00000024816 ENSMODG00000024817 PARD3B (ENSMODG00000016213) #21 NRP2 (ENSMODG00000016052) #22 ENSMODG00000016028 INO80D (ENSMODG00000016027) #23 NDUFS1 (ENSMODG00000016019) #24 EEF1B2 (ENSMODG00000016012) #25 GPR1 (ENSMODG00000046264) #26 ADAM23 (ENSMODG00000016005) #29 FAM237A (ENSMODG00000027693) ENSMODG00000016001 FASTKD2 (ENSMODG00000015997) CPO (ENSMODG00000015987) KLF7 (ENSMODG00000015982) CREB1 (ENSMODG00000015970) METTL21A (ENSMODG00000015959) ENSMODG00000015954 FZD5 (ENSMODG00000015949) Marsupialia_b DUPLICATION Marsupialia_b ANCESTRAL SPECIES 7 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270.c #22 ENSGT00940000155877 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b Diprotodontia ANCESTRAL SPECIES 31 ENSGT00940000153534.A.a ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270.c #22 ENSGT00940000155877 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b Diprotodontia_a ANCESTRAL SPECIES 30 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT01030000234979.a ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270.c #22 ENSGT00940000155877 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b koala MODERN SPECIES 231 FAM117B (ENSPCIG00000008837) ICA1L (ENSPCIG00000008836) WDR12 (ENSPCIG00000008835) CARF (ENSPCIG00000008833) #10 NBEAL1 (ENSPCIG00000022908) #11 ENSPCIG00000022906 CYP20A1 (ENSPCIG00000022811) #12 ABI2 (ENSPCIG00000015338) #13 ENSPCIG00000015308 #14 ENSPCIG00000015292 CD28 (ENSPCIG00000015286) #17 CTLA4 (ENSPCIG00000015278) #19 ENSPCIG00000015275 #20 PARD3B (ENSPCIG00000006317) #21 ENSPCIG00000006319 NRP2 (ENSPCIG00000006323) #22 ENSPCIG00000006327 INO80D (ENSPCIG00000006328) #23 NDUFS1 (ENSPCIG00000009914) #24 ENSPCIG00000009878 #25 CMKLR2 (ENSPCIG00000015684) #26 Common wonbat MODERN SPECIES 1038 ICA1L (ENSVURG00010005759) WDR12 (ENSVURG00010005744) CARF (ENSVURG00010005670) #10 NBEAL1 (ENSVURG00010005633) #11 ENSVURG00010005614 CYP20A1 (ENSVURG00010005594) #12 ABI2 (ENSVURG00010005572) #13 RAPH1 (ENSVURG00010005515) #14 ENSVURG00010005495 ENSVURG00010005489 CD28 (ENSVURG00010005486) #17 CTLA4 (ENSVURG00010005475) #19 ENSVURG00010005458 #20 ENSVURG00010005443 PARD3B (ENSVURG00010005402) #21 NRP2 (ENSVURG00010005142) #22 ENSVURG00010005096 INO80D (ENSVURG00010005077) #23 NDUFS1 (ENSVURG00010005021) #24 ENSVURG00010004989 #25 CMKLR2 (ENSVURG00010004980) #26 ENSVURG00010004970 ENSVURG00010004965 #28 FAM237A (ENSVURG00010004897) MDH1B (ENSVURG00010004893) FASTKD2 (ENSVURG00010004867) CPO (ENSVURG00010004833) ENSVURG00010004815 KLF7 (ENSVURG00010004801) CREB1 (ENSVURG00010004759) METTL21A (ENSVURG00010004735) Wallaby MODERN SPECIES 2706 NRP2 (ENSMEUG00000015331) #22 Tasmanian devil MODERN SPECIES 2 FAM117B (ENSSHAG00000008247) ICA1L (ENSSHAG00000007656) WDR12 (ENSSHAG00000006960) CARF (ENSSHAG00000006210) #10 NBEAL1 (ENSSHAG00000000284) #11 ENSSHAG00000021267 CYP20A1 (ENSSHAG00000028734) #12 ABI2 (ENSSHAG00000008450) #13 ENSSHAG00000007679 #14 CD28 (ENSSHAG00000028743) #17 CTLA4 (ENSSHAG00000016177) #19 ENSSHAG00000015832 #20 ENSSHAG00000024535 PARD3B (ENSSHAG00000001616) #21 ENSSHAG00000024159 #22 ENSSHAG00000018322 #22 ENSSHAG00000026001 INO80D (ENSSHAG00000029318) #23 NDUFS1 (ENSSHAG00000017865) #24 EEF1B2 (ENSSHAG00000017853) #25 CMKLR2 (ENSSHAG00000021936) #26 ENSSHAG00000028209 #28 ADAM23 (ENSSHAG00000017245) #29 FAM237A (ENSSHAG00000017064) MDH1B (ENSSHAG00000016820) ENSSHAG00000016740 ENSSHAG00000022521 CPO (ENSSHAG00000026232) KLF7 (ENSSHAG00000015861) CREB1 (ENSSHAG00000013905) METTL21A (ENSSHAG00000013828) Marsupialia_b ANCESTRAL SPECIES ENSGT00940000155270.d #22 Tasmanian devil MODERN SPECIES 2 BMPR2 (ENSSHAG00000009795) FAM117B (ENSSHAG00000008247) ICA1L (ENSSHAG00000007656) WDR12 (ENSSHAG00000006960) CARF (ENSSHAG00000006210) #10 NBEAL1 (ENSSHAG00000000284) #11 ENSSHAG00000021267 CYP20A1 (ENSSHAG00000028734) #12 ABI2 (ENSSHAG00000008450) #13 ENSSHAG00000007679 #14 CD28 (ENSSHAG00000028743) #17 CTLA4 (ENSSHAG00000016177) #19 ENSSHAG00000015832 #20 ENSSHAG00000024535 PARD3B (ENSSHAG00000001616) #21 ENSSHAG00000024159 #22 ENSSHAG00000018322 #22 ENSSHAG00000026001 INO80D (ENSSHAG00000029318) #23 NDUFS1 (ENSSHAG00000017865) #24 EEF1B2 (ENSSHAG00000017853) #25 CMKLR2 (ENSSHAG00000021936) #26 ENSSHAG00000028209 #28 ADAM23 (ENSSHAG00000017245) #29 FAM237A (ENSSHAG00000017064) MDH1B (ENSSHAG00000016820) ENSSHAG00000016740 ENSSHAG00000022521 CPO (ENSSHAG00000026232) KLF7 (ENSSHAG00000015861) CREB1 (ENSSHAG00000013905) Platypus MODERN SPECIES 18 ICA1L (ENSOANG00000011099) WDR12 (ENSOANG00000011097) CARF (ENSOANG00000011095) #10 NBEAL1 (ENSOANG00000011085) #11 ENSOANG00000009001 CYP20A1 (ENSOANG00000015019) #12 ABI2 (ENSOANG00000001380) #13 ENSOANG00000006769 #14 ENSOANG00000048576 CD28 (ENSOANG00000040633) #17 CTLA4 (ENSOANG00000010895) #19 ENSOANG00000007435 #20 ENSOANG00000041151 PARD3B (ENSOANG00000014041) #21 ENSOANG00000044745 #21 NRP2 (ENSOANG00000012962) #22 ENSOANG00000038688 INO80D (ENSOANG00000012965) #23 NDUFS1 (ENSOANG00000002321) #24 EEF1B2 (ENSOANG00000012964) #25 CMKLR2 (ENSOANG00000012797) #26 ADAM23 (ENSOANG00000000660) #29 FAM237A (ENSOANG00000045785) MDH1B (ENSOANG00000000659) ENSOANG00000020472 KLF7 (ENSOANG00000047076) TIMM17A (ENSOANG00000043200) LMOD1 (ENSOANG00000041996) SHISA4 (ENSOANG00000009360) IPO9 (ENSOANG00000009358) ENSOANG00000009356 Sauria ANCESTRAL SPECIES 32 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00390000003964.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b Lepidosauria ANCESTRAL SPECIES 7 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00390000003964.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B Episquamata ANCESTRAL SPECIES ENSGT00940000154319 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 Toxicofera ANCESTRAL SPECIES ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00930000150950.b ENSGT00950000185065 ENSGT00390000003964.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00390000012547.b Elapidae ANCESTRAL SPECIES ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00930000150950.b ENSGT00950000185065 ENSGT00390000003964.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089.g #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00960000187202 ENSGT00390000012547.b Elapidae_a ANCESTRAL SPECIES 39 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00960000187202 ENSGT00390000012547.b Acanthophiinae ANCESTRAL SPECIES 39 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00960000187202 ENSGT00390000012547.b Mainland tiger snake MODERN SPECIES 50 ENSNSUG00000005042 PARD3B (ENSNSUG00000005020) #21 NRP2 (ENSNSUG00000005004) #22 INO80D (ENSNSUG00000004988) #23 NDUFS1 (ENSNSUG00000004982) #24 EEF1B2 (ENSNSUG00000004974) #25 CMKLR2 (ENSNSUG00000004973) #26 ADAM23 (ENSNSUG00000004968) #29 MDH1B (ENSNSUG00000004966) FASTKD2 (ENSNSUG00000004850) KLF7 (ENSNSUG00000004849) CREB1 (ENSNSUG00000004838) METTL21A (ENSNSUG00000004836) ENSNSUG00000004835 ENSNSUG00000004833 ENSNSUG00000004832 PLEKHM3 (ENSNSUG00000004824) ENSNSUG00000004822 Eastern brown snake MODERN SPECIES 36 ENSPTXG00000008221 ENSPTXG00000008219 PARD3B (ENSPTXG00000008179) #21 NRP2 (ENSPTXG00000008167) #22 INO80D (ENSPTXG00000008163) #23 NDUFS1 (ENSPTXG00000008161) #24 EEF1B2 (ENSPTXG00000008156) #25 CMKLR2 (ENSPTXG00000008154) #26 ADAM23 (ENSPTXG00000008147) #29 MDH1B (ENSPTXG00000008146) FASTKD2 (ENSPTXG00000008144) KLF7 (ENSPTXG00000008140) CREB1 (ENSPTXG00000008139) METTL21A (ENSPTXG00000008138) ENSPTXG00000008137 ENSPTXG00000008136 PLEKHM3 (ENSPTXG00000008135) IDH1 (ENSPTXG00000008132) PIKFYVE (ENSPTXG00000007358) Indian cobra MODERN SPECIES NOP58 (ENSNNAG00000008788) BMPR2 (ENSNNAG00000008749) FAM117B (ENSNNAG00000008713) WDR12 (ENSNNAG00000008654) ENSNNAG00000008600 NBEAL1 (ENSNNAG00000008400) #11 ENSNNAG00000008350 CYP20A1 (ENSNNAG00000008325) #12 ABI2 (ENSNNAG00000008284) #13 RAPH1 (ENSNNAG00000007996) #14 CD28 (ENSNNAG00000007953) #17 CTLA4 (ENSNNAG00000007939) #19 ICOS (ENSNNAG00000007918) #20 ENSNNAG00000007910 PARD3B (ENSNNAG00000007817) #21 NRP2 (ENSNNAG00000007682) #22 INO80D (ENSNNAG00000007613) #23 NDUFS1 (ENSNNAG00000007093) #24 EEF1B2 (ENSNNAG00000006992) #25 CMKLR2 (ENSNNAG00000006981) #26 ADAM23 (ENSNNAG00000006219) #29 MDH1B (ENSNNAG00000006119) FASTKD2 (ENSNNAG00000006083) KLF7 (ENSNNAG00000006050) CREB1 (ENSNNAG00000006029) METTL21A (ENSNNAG00000005999) ENSNNAG00000005945 ENSNNAG00000005932 PLEKHM3 (ENSNNAG00000005905) ENSNNAG00000005842 ENSNNAG00000005828 Lizard MODERN SPECIES 822 FAM117B (ENSACAG00000004859) WDR12 (ENSACAG00000004774) ENSACAG00000004755 ENSACAG00000043702 ENSACAG00000037627 NBEAL1 (ENSACAG00000004721) #11 ENSACAG00000004658 CYP20A1 (ENSACAG00000004604) #12 ENSACAG00000045333 ABI2 (ENSACAG00000004539) #13 RAPH1 (ENSACAG00000004500) #14 CD28 (ENSACAG00000004486) #17 ENSACAG00000028063 #19 ENSACAG00000037252 PARD3B (ENSACAG00000004428) #21 NRP2 (ENSACAG00000004128) #22 INO80D (ENSACAG00000004095) #23 NDUFS1 (ENSACAG00000001471) #24 CMKLR2 (ENSACAG00000001415) #26 EEF1B2 (ENSACAG00000001423) #25 ADAM23 (ENSACAG00000009477) #29 ENSACAG00000028631 MDH1B (ENSACAG00000009563) FASTKD2 (ENSACAG00000009610) KLF7 (ENSACAG00000009642) Laterata ANCESTRAL SPECIES 42 ENSGT00940000158239.b ENSGT00950000183314 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 Argentine black and white tegu MODERN SPECIES 12 KIAA2012 (ENSSMRG00000020790) SUMO1 (ENSSMRG00000020789) NOP58 (ENSSMRG00000020786) BMPR2 (ENSSMRG00000020784) FAM117B (ENSSMRG00000020783) WDR12 (ENSSMRG00000020782) ENSSMRG00000020781 NBEAL1 (ENSSMRG00000020780) #11 ENSSMRG00000020779 CYP20A1 (ENSSMRG00000020778) #12 ABI2 (ENSSMRG00000020777) #13 RAPH1 (ENSSMRG00000020776) #14 ENSSMRG00000020658 CTLA4 (ENSSMRG00000020651) #19 PARD3B (ENSSMRG00000020645) #21 NRP2 (ENSSMRG00000020640) #22 INO80D (ENSSMRG00000020639) #23 NDUFS1 (ENSSMRG00000020638) #24 EEF1B2 (ENSSMRG00000020633) #25 CMKLR2 (ENSSMRG00000020632) #26 ADAM23 (ENSSMRG00000020333) #29 FAM237A (ENSSMRG00000020332) MDH1B (ENSSMRG00000020330) FASTKD2 (ENSSMRG00000020328) KLF7 (ENSSMRG00000020327) CREB1 (ENSSMRG00000020325) METTL21A (ENSSMRG00000020324) ENSSMRG00000020322 ENSSMRG00000020321 PLEKHM3 (ENSSMRG00000020318) C2orf80 (ENSSMRG00000020315) Common wall lizard MODERN SPECIES ENSPMRG00000006832 ENSPMRG00000006842 WDR12 (ENSPMRG00000006856) ENSPMRG00000006909 CARF (ENSPMRG00000006921) #10 ENSPMRG00000006930 NBEAL1 (ENSPMRG00000007358) #11 CYP20A1 (ENSPMRG00000008728) #12 ABI2 (ENSPMRG00000008747) #13 RAPH1 (ENSPMRG00000008789) #14 CD28 (ENSPMRG00000008873) #17 CTLA4 (ENSPMRG00000008883) #19 PARD3B (ENSPMRG00000008900) #21 ENSPMRG00000008928 ENSPMRG00000008932 NRP2 (ENSPMRG00000008950) #22 INO80D (ENSPMRG00000009029) #23 EEF1B2 (ENSPMRG00000009046) #25 NDUFS1 (ENSPMRG00000009096) #24 ADAM23 (ENSPMRG00000009258) #29 FAM237A (ENSPMRG00000009266) DYTN (ENSPMRG00000000114) ENSPMRG00000000134 ENSPMRG00000000143 FASTKD2 (ENSPMRG00000000149) KLF7 (ENSPMRG00000000188) CREB1 (ENSPMRG00000000233) METTL21A (ENSPMRG00000000269) ENSPMRG00000000296 ENSPMRG00000000317 ENSPMRG00000000354 tuatara MODERN SPECIES 1738 ENSSPUG00000018429 #20 PARD3B (ENSSPUG00000018394) #21 NRP2 (ENSSPUG00000018362) #22 Archelosauria ANCESTRAL SPECIES 8 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00390000003964.b ENSGT00950000185065 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00970000193449 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 Cryptodira ANCESTRAL SPECIES 5 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00950000185065 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00970000193449 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 Testudinoidea ANCESTRAL SPECIES 11 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00950000185065 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00970000193449 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 Emydidae ANCESTRAL SPECIES 4 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00950000185065 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00970000193449 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b painted turtle MODERN SPECIES 805 ENSCPBG00000015084 STK32A (ENSCPBG00000018970) ENSCPBG00000019076 ENSCPBG00000019086 #21 NRP2 (ENSCPBG00000019110) #22 INO80D (ENSCPBG00000019181) #23 NDUFS1 (ENSCPBG00000019234) #24 EEF1B2 (ENSCPBG00000019285) #25 ENSCPBG00000019321 CMKLR2 (ENSCPBG00000019397) #26 ADAM23 (ENSCPBG00000019586) #29 FAM237A (ENSCPBG00000020040) DYTN (ENSCPBG00000020053) MDH1B (ENSCPBG00000020070) FASTKD2 (ENSCPBG00000020108) CPO (ENSCPBG00000020174) KLF7 (ENSCPBG00000020188) CREB1 (ENSCPBG00000020191) METTL21A (ENSCPBG00000020196) ENSCPBG00000020210 Three-toed box turtle MODERN SPECIES 25 NOP58 (ENSTMTG00000010944) BMPR2 (ENSTMTG00000011025) FAM117B (ENSTMTG00000011056) ICA1L (ENSTMTG00000011077) WDR12 (ENSTMTG00000011113) CARF (ENSTMTG00000011136) #10 ENSTMTG00000011258 NBEAL1 (ENSTMTG00000011535) #11 ENSTMTG00000000064 ABI2 (ENSTMTG00000000124) #13 RAPH1 (ENSTMTG00000000330) #14 CD28 (ENSTMTG00000000707) #17 CTLA4 (ENSTMTG00000000717) #19 ICOS (ENSTMTG00000000728) #20 PARD3B (ENSTMTG00000000749) #21 NRP2 (ENSTMTG00000000762) #22 INO80D (ENSTMTG00000000797) #23 NDUFS1 (ENSTMTG00000000828) #24 EEF1B2 (ENSTMTG00000000857) #25 CMKLR2 (ENSTMTG00000000886) #26 ADAM23 (ENSTMTG00000000910) #29 FAM237A (ENSTMTG00000000963) DYTN (ENSTMTG00000000982) MDH1B (ENSTMTG00000001002) FASTKD2 (ENSTMTG00000001072) CPO (ENSTMTG00000001098) KLF7 (ENSTMTG00000001122) CREB1 (ENSTMTG00000001136) METTL21A (ENSTMTG00000001153) ENSTMTG00000001162 ENSTMTG00000001184 Testudinidae ANCESTRAL SPECIES 8 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00950000185065 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000176171 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00970000193449 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 Goode s thornscrub tortoise MODERN SPECIES 2 ICA1L (ENSGEVG00005011235) WDR12 (ENSGEVG00005011195) CARF (ENSGEVG00005011158) #10 ENSGEVG00005011079 NBEAL1 (ENSGEVG00005007841) #11 ENSGEVG00005007312 CYP20A1 (ENSGEVG00005007271) #12 ENSGEVG00005007253 ABI2 (ENSGEVG00005007221) #13 RAPH1 (ENSGEVG00005007171) #14 CD28 (ENSGEVG00005007000) #17 CTLA4 (ENSGEVG00005006968) #19 ICOS (ENSGEVG00005006946) #20 PARD3B (ENSGEVG00005006583) #21 ENSGEVG00005006463 NRP2 (ENSGEVG00005006393) #22 INO80D (ENSGEVG00005006347) #23 NDUFS1 (ENSGEVG00005006314) #24 EEF1B2 (ENSGEVG00005006284) #25 CMKLR2 (ENSGEVG00005006269) #26 ENSGEVG00005006255 #28 ADAM23 (ENSGEVG00005006163) #29 FAM237A (ENSGEVG00005006142) DYTN (ENSGEVG00005006111) MDH1B (ENSGEVG00005006096) FASTKD2 (ENSGEVG00005006068) CPO (ENSGEVG00005005978) KLF7 (ENSGEVG00005005958) CREB1 (ENSGEVG00005005883) METTL21A (ENSGEVG00005005862) ENSGEVG00005005842 Abingdon island giant tortoise MODERN SPECIES 668 ENSCABG00000003073 #21 NRP2 (ENSCABG00000003082) #22 INO80D (ENSCABG00000003095) #23 NDUFS1 (ENSCABG00000003121) #24 EEF1B2 (ENSCABG00000003323) #25 ENSCABG00000003325 CMKLR2 (ENSCABG00000003336) #26 Chinese turtle MODERN SPECIES 677 ENSPSIG00000018140 ENSPSIG00000018142 ENSPSIG00000003550 ENSPSIG00000003565 ENSPSIG00000003574 BZW1 (ENSPSIG00000003613) CLK1 (ENSPSIG00000003762) PPIL3 (ENSPSIG00000003967) NIF3L1 (ENSPSIG00000004085) ORC2 (ENSPSIG00000004159) HYCC2 (ENSPSIG00000004753) NDUFB3 (ENSPSIG00000004805) CFLAR (ENSPSIG00000004865) ENSPSIG00000001200 PARD3B (ENSPSIG00000004999) #21 NRP2 (ENSPSIG00000005456) #22 Archosauria ANCESTRAL SPECIES 6 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00950000185065 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00970000193449 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 Aves ANCESTRAL SPECIES 8 ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00390000004840 ENSGT00940000159232 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00970000193449 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 Neognathae ANCESTRAL SPECIES 6 ENSGT00940000156307.b ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00390000004840 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00970000193449 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 Galloanserae ANCESTRAL SPECIES 7 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00390000004840 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408.b ENSGT00940000157249 ENSGT00940000154453.b.d Anatidae ANCESTRAL SPECIES 10 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00390000004840 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408.b ENSGT00940000157249 ENSGT00940000154453.b.d ENSGT00940000161191.B ENSGT00940000159743 Duck MODERN SPECIES 25 IDH1 (ENSAPLG00000014810) ENSAPLG00000015011 ENSAPLG00000018471 ENSAPLG00000024504 ENSAPLG00000017302 #11 ENSAPLG00000027901 #11 ENSAPLG00000025723 ENSAPLG00000025132 CYP20A1 (ENSAPLG00000015942) #12 ABI2 (ENSAPLG00000016216) #13 RAPH1 (ENSAPLG00000000860) #14 CD28 (ENSAPLG00000001723) #17 CTLA4 (ENSAPLG00000001966) #19 ICOS (ENSAPLG00000002410) #20 PARD3B (ENSAPLG00000002583) #21 NRP2 (ENSAPLG00000002735) #22 INO80D (ENSAPLG00000004131) #23 NDUFS1 (ENSAPLG00000004262) #24 EEF1B2 (ENSAPLG00000004841) #25 CMKLR2 (ENSAPLG00000001630) #26 ADAM23 (ENSAPLG00000005205) #29 FAM237A (ENSAPLG00000005882) ENSAPLG00000005888 MDH1B (ENSAPLG00000006087) FASTKD2 (ENSAPLG00000006177) CPO (ENSAPLG00000006729) KLF7 (ENSAPLG00000006752) CREB1 (ENSAPLG00000006786) METTL21A (ENSAPLG00000007133) ENSAPLG00000007167 ENSAPLG00000001632 Pink-footed goose MODERN SPECIES 120 ABI2 (ENSABRG00000018029) #13 RAPH1 (ENSABRG00000018013) #14 CD28 (ENSABRG00000018006) #17 CTLA4 (ENSABRG00000018000) #19 ICOS (ENSABRG00000017991) #20 PARD3B (ENSABRG00000017834) #21 NRP2 (ENSABRG00000017280) #22 INO80D (ENSABRG00000017222) #23 NDUFS1 (ENSABRG00000017107) #24 EEF1B2 (ENSABRG00000017085) #25 CMKLR2 (ENSABRG00000017081) #26 ADAM23 (ENSABRG00000016867) #29 FAM237A (ENSABRG00000016843) MDH1B (ENSABRG00000016828) FASTKD2 (ENSABRG00000016816) CPO (ENSABRG00000016806) KLF7 (ENSABRG00000016797) CREB1 (ENSABRG00000016788) ENSABRG00000016786 ENSABRG00000016702 ENSABRG00000016686 PLEKHM3 (ENSABRG00000016681) Phasianidae ANCESTRAL SPECIES 8 ENSGT00940000160192 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408.b ENSGT00940000157249 ENSGT00940000154453.b.d Japanese quail MODERN SPECIES 25 KLF7 (ENSCJPG00005015354) CPO (ENSCJPG00005015355) FASTKD2 (ENSCJPG00005015357) MDH1B (ENSCJPG00005015360) ADAM23 (ENSCJPG00005015363) #29 CMKLR2 (ENSCJPG00005015367) #26 RAPH1 (ENSCJPG00005015370) #14 ENSCJPG00005015375 CD28 (ENSCJPG00005015378) #17 CTLA4 (ENSCJPG00005015379) #19 ICOS (ENSCJPG00005015381) #20 PARD3B (ENSCJPG00005015409) #21 ENSCJPG00005015846 ENSCJPG00005015847 ENSCJPG00005015848 NRP2 (ENSCJPG00005015851) #22 INO80D (ENSCJPG00005015857) #23 NDUFS1 (ENSCJPG00005015858) #24 EEF1B2 (ENSCJPG00005015859) #25 ABI2 (ENSCJPG00005015864) #13 CYP20A1 (ENSCJPG00005015897) #12 ENSCJPG00005015898 NBEAL1 (ENSCJPG00005015909) #11 ENSCJPG00005016282 IDH1 (ENSCJPG00005016283) PIKFYVE (ENSCJPG00005016284) DNAJC10 (ENSCJPG00005016431) PDE1A (ENSCJPG00005016432) PPP1R1C (ENSCJPG00005016722) ITPRID2 (ENSCJPG00005016723) NEUROD1 (ENSCJPG00005016724) Phasianidae_b ANCESTRAL SPECIES 8 ENSGT00940000160192 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408.b ENSGT00940000157249 ENSGT00940000154453.b.d Chicken MODERN SPECIES 36 PPP1R1C (ENSGALG00010022396) PDE1A (ENSGALG00010022334) DNAJC10 (ENSGALG00010022293) PIKFYVE (ENSGALG00010022245) IDH1 (ENSGALG00010022213) ENSGALG00010022181 NBEAL1 (ENSGALG00010022149) #11 ENSGALG00010022124 CYP20A1 (ENSGALG00010022116) #12 ABI2 (ENSGALG00010022079) #13 RAPH1 (ENSGALG00010022033) #14 CD28 (ENSGALG00010021995) #17 CTLA4 (ENSGALG00010021983) #19 ICOS (ENSGALG00010021971) #20 PARD3B (ENSGALG00010021734) #21 NRP2 (ENSGALG00010026008) #22 INO80D (ENSGALG00010025994) #23 NDUFS1 (ENSGALG00010025984) #24 EEF1B2 (ENSGALG00010025974) #25 GPR1 (ENSGALG00010025960) #26 ENSGALG00010025836 #28 ADAM23 (ENSGALG00010026825) #29 FAM237A (ENSGALG00010025900) DYTN (ENSGALG00010025894) MDH1B (ENSGALG00010025874) FASTKD2 (ENSGALG00010025869) CPO (ENSGALG00010025855) KLF7 (ENSGALG00010025822) CREB1 (ENSGALG00010025351) METTL21A (ENSGALG00010025340) FZD5 (ENSGALG00010025333) Turkey MODERN SPECIES 27 ITPRID2 (ENSMGAG00000009083) PPP1R1C (ENSMGAG00000009069) PDE1A (ENSMGAG00000009032) ENSMGAG00000008939 ENSMGAG00000008920 ENSMGAG00000008985 ENSMGAG00000019768 NBEAL1 (ENSMGAG00000008870) #11 ENSMGAG00000019797 CYP20A1 (ENSMGAG00000008831) #12 ABI2 (ENSMGAG00000008821) #13 RAPH1 (ENSMGAG00000008794) #14 CD28 (ENSMGAG00000008783) #17 CTLA4 (ENSMGAG00000008759) #19 ICOS (ENSMGAG00000008751) #20 ENSMGAG00000021009 #22 PARD3B (ENSMGAG00000008728) #21 INO80D (ENSMGAG00000008621) #23 NDUFS1 (ENSMGAG00000008573) #24 EEF1B2 (ENSMGAG00000008548) #25 CMKLR2 (ENSMGAG00000016159) #26 ADAM23 (ENSMGAG00000008433) #29 FAM237A (ENSMGAG00000020531) MDH1B (ENSMGAG00000008532) FASTKD2 (ENSMGAG00000008516) CPO (ENSMGAG00000008430) KLF7 (ENSMGAG00000008396) CREB1 (ENSMGAG00000008360) METTL21A (ENSMGAG00000008350) ENSMGAG00000008327 ENSMGAG00000016153 Neognathae_b ANCESTRAL SPECIES 7 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00970000193449 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 Neognathae_c ANCESTRAL SPECIES 9 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00390000004840 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00440000037606.b #28 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b Golden eagle MODERN SPECIES 22 PIKFYVE (ENSACCG00020002433) IDH1 (ENSACCG00020002412) ENSACCG00020002399 ENSACCG00020002387 ENSACCG00020002374 ENSACCG00020002359 NBEAL1 (ENSACCG00020001867) #11 ENSACCG00020001270 CYP20A1 (ENSACCG00020001252) #12 ABI2 (ENSACCG00020001210) #13 RAPH1 (ENSACCG00020001057) #14 CD28 (ENSACCG00020000853) #17 CTLA4 (ENSACCG00020000823) #19 ICOS (ENSACCG00020000759) #20 PARD3B (ENSACCG00020000685) #21 NRP2 (ENSACCG00020000561) #22 INO80D (ENSACCG00020000521) #23 NDUFS1 (ENSACCG00020000486) #24 EEF1B2 (ENSACCG00020000452) #25 CMKLR2 (ENSACCG00020000445) #26 ADAM23 (ENSACCG00020000416) #29 FAM237A (ENSACCG00020000352) DYTN (ENSACCG00020000333) MDH1B (ENSACCG00020000316) FASTKD2 (ENSACCG00020003396) CPO (ENSACCG00020003371) KLF7 (ENSACCG00020003351) CREB1 (ENSACCG00020003332) METTL21A (ENSACCG00020003321) ENSACCG00020003303 ENSACCG00020003288 Kakapo MODERN SPECIES 22 ENSSHBG00005005122 ENSSHBG00005005117 IDH1 (ENSSHBG00005005110) ENSSHBG00005005104 C2orf80 (ENSSHBG00005005096) ENSSHBG00005005091 NBEAL1 (ENSSHBG00005003608) #11 ENSSHBG00005002906 CYP20A1 (ENSSHBG00005002889) #12 ABI2 (ENSSHBG00005002858) #13 RAPH1 (ENSSHBG00005002809) #14 CTLA4 (ENSSHBG00005002762) #19 ICOS (ENSSHBG00005002727) #20 PARD3B (ENSSHBG00005002706) #21 ENSSHBG00005002675 #21 NRP2 (ENSSHBG00005002621) #22 INO80D (ENSSHBG00005002582) #23 NDUFS1 (ENSSHBG00005002546) #24 EEF1B2 (ENSSHBG00005002514) #25 CMKLR2 (ENSSHBG00005002504) #26 ENSSHBG00005002492 #28 ADAM23 (ENSSHBG00005002434) #29 FAM237A (ENSSHBG00005002374) MDH1B (ENSSHBG00005002354) FASTKD2 (ENSSHBG00005002335) CPO (ENSSHBG00005002311) KLF7 (ENSSHBG00005002296) CREB1 (ENSSHBG00005002287) METTL21A (ENSSHBG00005002278) ENSSHBG00005002269 ENSSHBG00005002253 Passeriformes ANCESTRAL SPECIES 6 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00970000193449 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b Passeriformes_d ANCESTRAL SPECIES 8 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041.n #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00970000193449 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b Passeriformes_g ANCESTRAL SPECIES 9 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041.n #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00970000193449 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b Passeroidea ANCESTRAL SPECIES 8 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041.n #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00970000193449 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B Common canary MODERN SPECIES 8 PPP1R1C (ENSSCAG00000001436) PDE1A (ENSSCAG00000001471) DNAJC10 (ENSSCAG00000001534) PIKFYVE (ENSSCAG00000001572) IDH1 (ENSSCAG00000001636) ENSSCAG00000001645 NBEAL1 (ENSSCAG00000001665) #11 ENSSCAG00000001706 CYP20A1 (ENSSCAG00000001710) #12 ABI2 (ENSSCAG00000001723) #13 RAPH1 (ENSSCAG00000001749) #14 CD28 (ENSSCAG00000001788) #17 CTLA4 (ENSSCAG00000001805) #19 ICOS (ENSSCAG00000001811) #20 PARD3B (ENSSCAG00000001874) #21 NRP2 (ENSSCAG00000002055) #22 INO80D (ENSSCAG00000002336) #23 NDUFS1 (ENSSCAG00000002344) #24 EEF1B2 (ENSSCAG00000002352) #25 ENSSCAG00000002359 CMKLR2 (ENSSCAG00000002370) #26 ADAM23 (ENSSCAG00000002375) #29 FAM237A (ENSSCAG00000002412) MDH1B (ENSSCAG00000002419) FASTKD2 (ENSSCAG00000002424) CPO (ENSSCAG00000002428) KLF7 (ENSSCAG00000002434) CREB1 (ENSSCAG00000002440) METTL21A (ENSSCAG00000002451) ENSSCAG00000002462 ENSSCAG00000002470 Zebra finch MODERN SPECIES 29 DNAJC10 (ENSTGUG00000009565) PIKFYVE (ENSTGUG00000009607) ENSTGUG00000028065 IDH1 (ENSTGUG00000023800) ENSTGUG00000018851 NBEAL1 (ENSTGUG00000029141) #11 ENSTGUG00000025723 CYP20A1 (ENSTGUG00000009709) #12 ABI2 (ENSTGUG00000009728) #13 RAPH1 (ENSTGUG00000009747) #14 CD28 (ENSTGUG00000016732) #17 CTLA4 (ENSTGUG00000009756) #19 ICOS (ENSTGUG00000009766) #20 ENSTGUG00000025370 PARD3B (ENSTGUG00000009770) #21 NRP2 (ENSTGUG00000009797) #22 INO80D (ENSTGUG00000009890) #23 NDUFS1 (ENSTGUG00000009895) #24 EEF1B2 (ENSTGUG00000009931) #25 CMKLR2 (ENSTGUG00000009954) #26 ADAM23 (ENSTGUG00000009963) #29 DYTN (ENSTGUG00000027316) FAM237A (ENSTGUG00000009992) MDH1B (ENSTGUG00000009999) FASTKD2 (ENSTGUG00000010004) CPO (ENSTGUG00000010012) KLF7 (ENSTGUG00000010017) CREB1 (ENSTGUG00000021110) METTL21A (ENSTGUG00000010049) ENSTGUG00000010055 ENSTGUG00000010062 Medium ground finch MODERN SPECIES 1 PDE1A (ENSGFOG00000004634) DNAJC10 (ENSGFOG00000004722) PIKFYVE (ENSGFOG00000004768) IDH1 (ENSGFOG00000004936) ENSGFOG00000004948 NBEAL1 (ENSGFOG00000005037) #11 ENSGFOG00000006136 CYP20A1 (ENSGFOG00000006144) #12 ABI2 (ENSGFOG00000006158) #13 RAPH1 (ENSGFOG00000006191) #14 CD28 (ENSGFOG00000006204) #17 CTLA4 (ENSGFOG00000006210) #19 ICOS (ENSGFOG00000006216) #20 ENSGFOG00000006219 PARD3B (ENSGFOG00000006247) #21 NRP2 (ENSGFOG00000006567) #22 INO80D (ENSGFOG00000006596) #23 NDUFS1 (ENSGFOG00000006610) #24 EEF1B2 (ENSGFOG00000006636) #25 ENSGFOG00000006645 CMKLR2 (ENSGFOG00000006655) #26 ADAM23 (ENSGFOG00000006668) #29 FAM237A (ENSGFOG00000006747) DYTN (ENSGFOG00000006753) MDH1B (ENSGFOG00000006762) FASTKD2 (ENSGFOG00000006769) CPO (ENSGFOG00000006781) KLF7 (ENSGFOG00000006789) CREB1 (ENSGFOG00000006794) METTL21A (ENSGFOG00000006799) ENSGFOG00000006802 Flycatcher MODERN SPECIES 26 ENSFALG00000003616 ENSFALG00000003629 ENSFALG00000003640 ENSFALG00000023124 ENSFALG00000023047 #11 ENSFALG00000003658 #11 ENSFALG00000003669 CYP20A1 (ENSFALG00000003678) #12 ABI2 (ENSFALG00000003705) #13 RAPH1 (ENSFALG00000003713) #14 CD28 (ENSFALG00000003718) #17 CTLA4 (ENSFALG00000003729) #19 ICOS (ENSFALG00000003743) #20 PARD3B (ENSFALG00000003749) #21 ENSFALG00000024358 NRP2 (ENSFALG00000003789) #22 INO80D (ENSFALG00000003838) #23 NDUFS1 (ENSFALG00000003849) #24 EEF1B2 (ENSFALG00000003879) #25 CMKLR2 (ENSFALG00000015287) #26 ADAM23 (ENSFALG00000003913) #29 FAM237A (ENSFALG00000003948) DYTN (ENSFALG00000003952) MDH1B (ENSFALG00000003957) FASTKD2 (ENSFALG00000003964) CPO (ENSFALG00000003980) KLF7 (ENSFALG00000003989) ENSFALG00000023985 CREB1 (ENSFALG00000003996) METTL21A (ENSFALG00000004003) ENSFALG00000027089 Great tit MODERN SPECIES 27 PPP1R1C (ENSPMJG00000018351) PDE1A (ENSPMJG00000018348) DNAJC10 (ENSPMJG00000018346) PIKFYVE (ENSPMJG00000018335) IDH1 (ENSPMJG00000018333) ENSPMJG00000018332 NBEAL1 (ENSPMJG00000018330) #11 ENSPMJG00000018329 CYP20A1 (ENSPMJG00000018328) #12 ABI2 (ENSPMJG00000018327) #13 RAPH1 (ENSPMJG00000018308) #14 CD28 (ENSPMJG00000018298) #17 CTLA4 (ENSPMJG00000018297) #19 ICOS (ENSPMJG00000018295) #20 PARD3B (ENSPMJG00000018290) #21 NRP2 (ENSPMJG00000018287) #22 INO80D (ENSPMJG00000018285) #23 NDUFS1 (ENSPMJG00000018281) #24 EEF1B2 (ENSPMJG00000018274) #25 CMKLR2 (ENSPMJG00000018273) #26 ADAM23 (ENSPMJG00000018267) #29 FAM237A (ENSPMJG00000018264) DYTN (ENSPMJG00000018263) MDH1B (ENSPMJG00000018262) FASTKD2 (ENSPMJG00000018261) CPO (ENSPMJG00000018259) KLF7 (ENSPMJG00000018257) CREB1 (ENSPMJG00000018256) METTL21A (ENSPMJG00000018255) ENSPMJG00000018252 ENSPMJG00000018250 African ostrich MODERN SPECIES 602 ENSSCUG00000009062 #21 NRP2 (ENSSCUG00000009065) #22 INO80D (ENSSCUG00000009069) #23 NDUFS1 (ENSSCUG00000009074) #24 EEF1B2 (ENSSCUG00000009076) #25 CMKLR2 (ENSSCUG00000009084) #26 ADAM23 (ENSSCUG00000009094) #29 FAM237A (ENSSCUG00000009115) DYTN (ENSSCUG00000009118) MDH1B (ENSSCUG00000009125) FASTKD2 (ENSSCUG00000009126) CPO (ENSSCUG00000009130) KLF7 (ENSSCUG00000009135) CREB1 (ENSSCUG00000009137) METTL21A (ENSSCUG00000009140) ENSSCUG00000009142 PLEKHM3 (ENSSCUG00000009146) Australian saltwater crocodile MODERN SPECIES 66 FAM117B (ENSCPRG00005001420) ENSCPRG00005001426 WDR12 (ENSCPRG00005001450) CARF (ENSCPRG00005001462) #10 ENSCPRG00005001474 NBEAL1 (ENSCPRG00005001495) #11 ENSCPRG00005001521 CYP20A1 (ENSCPRG00005001526) #12 ABI2 (ENSCPRG00005001556) #13 RAPH1 (ENSCPRG00005001588) #14 CD28 (ENSCPRG00005001690) #17 CTLA4 (ENSCPRG00005001699) #19 ICOS (ENSCPRG00005001703) #20 ENSCPRG00005001708 PARD3B (ENSCPRG00005001781) #21 NRP2 (ENSCPRG00005001802) #22 INO80D (ENSCPRG00005001847) #23 NDUFS1 (ENSCPRG00005001849) #24 EEF1B2 (ENSCPRG00005001854) #25 CMKLR2 (ENSCPRG00005001863) #26 ADAM23 (ENSCPRG00005001887) #29 FAM237A (ENSCPRG00005001904) DYTN (ENSCPRG00005001912) MDH1B (ENSCPRG00005001923) FASTKD2 (ENSCPRG00005001926) CPO (ENSCPRG00005001934) KLF7 (ENSCPRG00005001954) CREB1 (ENSCPRG00005001961) METTL21A (ENSCPRG00005001979) ENSCPRG00005001990 ENSCPRG00005002000 Anura ANCESTRAL SPECIES 39 ENSGT00940000153534.A ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 #10 ENSGT00940000155041 #11 ENSGT00390000017619 ENSGT00500000044939 #12 ENSGT00940000156089 #13 ENSGT00940000156552 #14 ENSGT00530000063873.A #17 ENSGT00530000063873.B #19 ENSGT00390000000801 #20 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642.b #26 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508.d ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 Frog MODERN SPECIES 9 nbeal1 (ENSXETG00000022086) #11 carf (ENSXETG00000031604) #10 wdr12 (ENSXETG00000022077) fam117b (ENSXETG00000022076) bmpr2 (ENSXETG00000022074) nop58 (ENSXETG00000022073) sumo1 (ENSXETG00000022072) kiaa2012 (ENSXETG00000041127) fzd7 (ENSXETG00000012404) ENSXETG00000040147 ENSXETG00000037714 cdk15 (ENSXETG00000012405) als2 (ENSXETG00000012406) ICOS (ENSXETG00000040525) #20 pard3b (ENSXETG00000012407) #21 nrp2 (ENSXETG00000010095) #22 ENSXETG00000048152 ino80d (ENSXETG00000033629) #23 eef1b2 (ENSXETG00000010098) #25 ndufs1 (ENSXETG00000010108) #24 cops8 (ENSXETG00000025427) cmklr2 (ENSXETG00000043302) #26 ENSXETG00000042410 ENSXETG00000046685 adam23 (ENSXETG00000010118) #29 ENSXETG00000044734 mdh1b (ENSXETG00000034073) fastkd2 (ENSXETG00000031283) ENSXETG00000048816 klf7 (ENSXETG00000046427) creb1 (ENSXETG00000016392) Leishan spiny toad MODERN SPECIES 10 ENSLLEG00000011716 CYP20A1 (ENSLLEG00000011493) #12 ENSLLEG00000011462 ABI2 (ENSLLEG00000010961) #13 RAPH1 (ENSLLEG00000010703) #14 ENSLLEG00000010668 CD28 (ENSLLEG00000010533) #17 CTLA4 (ENSLLEG00000010451) #19 ENSLLEG00000010351 ENSLLEG00000010325 ENSLLEG00000010283 ENSLLEG00000010251 ENSLLEG00000010225 PARD3B (ENSLLEG00000009175) #21 ENSLLEG00000009072 NRP2 (ENSLLEG00000008733) #22 DUSP19 (ENSLLEG00000008672) NCKAP1 (ENSLLEG00000007431) FRZB (ENSLLEG00000007263) ENSLLEG00000006981 PDE1A (ENSLLEG00000006725) PPP1R1C (ENSLLEG00000006668) ITPRID2 (ENSLLEG00000006600) NEUROD1 (ENSLLEG00000006576) CERKL (ENSLLEG00000006429) ITGA4 (ENSLLEG00000006184) ENSLLEG00000006132 UBE2E3 (ENSLLEG00000006049) ENSLLEG00000006014 ENSLLEG00000006002 CWC22 (ENSLLEG00000005755) Coelacanth MODERN SPECIES 669 PARD3B (ENSLACG00000003766) #21 ENSLACG00000013079 ##21 NRP2 (ENSLACG00000013759) #22 INO80D (ENSLACG00000015319) #23 NDUFS1 (ENSLACG00000015589) #24 EEF1B2 (ENSLACG00000015714) #25 CMKLR2 (ENSLACG00000015809) #26 Actinopterygii ANCESTRAL SPECIES 116 ENSGT00390000004553 ENSGT00940000168433 ENSGT00940000155126 ENSGT00940000166348 ENSGT00940000161508 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00940000157974 #23 ENSGT00940000153514.b #24 ENSGT00950000183014.f.a #25 ENSGT00940000160642 #26 ENSGT00940000158781 #29 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00530000063873.B #19 ENSGT00530000063873.A #17 ENSGT00940000156552 #14 ENSGT00940000156089 #13 ENSGT00940000176171 ENSGT00500000044939 #12 Neopterygii ANCESTRAL SPECIES 193 ENSGT00940000154486.b.a.a.b ENSGT00940000154486.b.b ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000002174.b ENSGT00390000006330.a.a ENSGT00390000010463.a.b ENSGT01050000244905.F ENSGT01050000244905.D ENSGT00390000004553 ENSGT00940000168433 ENSGT00940000155126 ENSGT00940000166348 ENSGT00940000161508 ENSGT00950000183214.a.b.a.b #21 ENSGT00940000155270 #22 ENSGT00950000183019.f.b.b ENSGT00940000157916 ENSGT00390000000862 ENSGT00940000156160 Spotted gar MODERN SPECIES 650 il2rb (ENSLOCG00000011165) ENSLOCG00000011158 ENSLOCG00000011151 ENSLOCG00000011143 TST (ENSLOCG00000011138) ENSLOCG00000011136 ENSLOCG00000011127 ENSLOCG00000011119 mief1 (ENSLOCG00000011112) atf4a (ENSLOCG00000011103) ENSLOCG00000017844 ENSLOCG00000011098 ENSLOCG00000011089 cpo (ENSLOCG00000011079) ENSLOCG00000011058 #21 nrp2a (ENSLOCG00000011036) #22 prkag3b (ENSLOCG00000011025) ENSLOCG00000011018 cnppd1 (ENSLOCG00000011010) ENSLOCG00000011002 retreg2 (ENSLOCG00000010995) FER1L6 (ENSLOCG00000010977) ENSLOCG00000010972 CFAP65 (ENSLOCG00000010951) mnx2b (ENSLOCG00000010942) stk16 (ENSLOCG00000010936) MAP3K2 (ENSLOCG00000010929) ercc3 (ENSLOCG00000010907) ENSLOCG00000010896 ENSLOCG00000010886 ENSLOCG00000010877 Osteoglossocephalai ANCESTRAL SPECIES 178 ENSGT00390000004553 ENSGT00940000155126.s.a ENSGT00940000168433 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00950000183214.a.b.a.b.f.b #21 ENSGT00940000155270 #22 ENSGT00940000156160 ENSGT00390000000862 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00530000063873.B #19 ENSGT00940000178309 ENSGT00940000156552.c.a #14 ENSGT00940000156089 #13 ENSGT00500000044939 #12 ENSGT00390000005159 ENSGT00940000156444 ENSGT00940000155861.C.e ENSGT00940000159606 ENSGT00940000158239.a.b ENSGT00860000133854 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 86 ENSGT00550000075037 ENSGT00940000160059.a.b ENSGT00390000004553 ENSGT00940000155126.s.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.g #22 ENSGT00940000156160 ENSGT00940000157916 ENSGT00940000164110.a.a ENSGT00940000159069 ENSGT00530000063410.b ENSGT00530000063873.B.e #19 ENSGT00940000178309 ENSGT00940000156552.c.a.h #14 ENSGT00390000009001 ENSGT00390000005159.l ENSGT00940000156444.e ENSGT00940000159606 ENSGT00940000158239.a.b.a ENSGT00940000172395 ENSGT00940000154319.c.b Asian bonytongue MODERN SPECIES 3 TMEM198 (ENSSFOG00015012958) desmb (ENSSFOG00015012984) dnpep (ENSSFOG00015013051) PTPRN (ENSSFOG00015013117) dnajb2 (ENSSFOG00015013167) ENSSFOG00015032957 ENSSFOG00015026487 ENSSFOG00015031461 ENSSFOG00015031009 mnx2b (ENSSFOG00015015616) stk16 (ENSSFOG00015015622) tuba8l2 (ENSSFOG00015025297) atic (ENSSFOG00015015699) fn1b (ENSSFOG00015015910) ENSSFOG00015016998 #21 NRP2 (ENSSFOG00015017053) #22 abcb6a (ENSSFOG00015017166) retreg2 (ENSSFOG00015017310) FER1L6 (ENSSFOG00015017331) mdh1b (ENSSFOG00015017397) ENSSFOG00015025889 CTLA4 (ENSSFOG00015017416) #19 ENSSFOG00015017428 RAPH1 (ENSSFOG00015017453) #14 ENSSFOG00015026680 ABI2 (ENSSFOG00015017511) #13 TMEM237 (ENSSFOG00015017568) MPP4 (ENSSFOG00015017618) cdk15 (ENSSFOG00015017727) fzd7a (ENSSFOG00015017773) ENSSFOG00015017787 P. kingsleyae MODERN SPECIES 8 TMEM198 (ENSPKIG00000001632) desmb (ENSPKIG00000001657) dnpep (ENSPKIG00000001716) PTPRN (ENSPKIG00000001805) dnajb2 (ENSPKIG00000001907) ENSPKIG00000001956 ENSPKIG00000001966 ENSPKIG00000001982 TUBA4A (ENSPKIG00000002008) stk16 (ENSPKIG00000002035) mnx2b (ENSPKIG00000002066) atic (ENSPKIG00000002172) fn1b (ENSPKIG00000002247) ENSPKIG00000002315 ENSPKIG00000002362 #21 NRP2 (ENSPKIG00000002549) #22 ENSPKIG00000002675 abcb6a (ENSPKIG00000002713) ENSPKIG00000002839 retreg2 (ENSPKIG00000002909) ENSPKIG00000002927 FER1L6 (ENSPKIG00000002971) mdh1b (ENSPKIG00000003031) ENSPKIG00000003058 #19 ENSPKIG00000003078 ENSPKIG00000003089 ENSPKIG00000003105 ENSPKIG00000003117 ABI2 (ENSPKIG00000003196) #13 TMEM237 (ENSPKIG00000003302) MPP4 (ENSPKIG00000003356) Osteoglossiformes ANCESTRAL SPECIES 79 ENSGT00390000002204 ENSGT00940000156884 ENSGT00950000182905.a.a.a.a.a.b ENSGT00390000016940.c.b ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.a.b ENSGT00940000160220 ENSGT00950000183165.b.a.e.b ENSGT00950000183165.a.a.b ENSGT00940000164719 ENSGT00430000031142 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.b ENSGT00950000183214.a.b.a.b.f.b #21 ENSGT00940000155270.h #22 ENSGT00390000000862 ENSGT00950000183019.f.b.b.c ENSGT00940000164110.b ENSGT01030000234607.A.b ENSGT00530000063873.B.f #19 ENSGT00940000156552.c.a.g #14 ENSGT00940000156089 #13 ENSGT00500000044939 #12 ENSGT00390000005159.k ENSGT00940000156444.f ENSGT00940000155861.C.e ENSGT00940000158239.a.b.b ENSGT00940000154319.c.a ENSGT00930000150950.b ENSGT00390000005530.a.a.k Asian bonytongue MODERN SPECIES 5 TMEM198 (ENSSFOG00015004809) desma (ENSSFOG00015004838) PTPRN (ENSSFOG00015004881) ENSSFOG00015032440 tuba8l3 (ENSSFOG00015026320) TUBA4A (ENSSFOG00015005821) ENSSFOG00015005840 ENSSFOG00015005880 fn1a (ENSSFOG00015005934) ENSSFOG00015025336 cpo (ENSSFOG00015006047) ENSSFOG00015006113 ENSSFOG00015031434 ENSSFOG00015006078 #21 ENSSFOG00015027322 NRP2 (ENSSFOG00015006142) #22 cnppd1 (ENSSFOG00015006238) prkag3b (ENSSFOG00015006261) ENSSFOG00015006297 ENSSFOG00015006306 ENSSFOG00015025277 #19 RAPH1 (ENSSFOG00015006320) #14 ABI2 (ENSSFOG00015006375) #13 cyp20a1 (ENSSFOG00015006435) #12 TMEM237 (ENSSFOG00015006497) MPP4 (ENSSFOG00015006525) ALS2 (ENSSFOG00015006570) FZD7 (ENSSFOG00015006669) SUMO1 (ENSSFOG00015025642) ENSSFOG00015027483 wdr12 (ENSSFOG00015006713) P. kingsleyae MODERN SPECIES 35 ENSPKIG00000005225 ENSPKIG00000005246 fn1a (ENSPKIG00000006068) ENSPKIG00000007941 cpo (ENSPKIG00000007966) NRP2 (ENSPKIG00000007999) #22 cnppd1 (ENSPKIG00000008050) prkag3b (ENSPKIG00000008081) retreg2 (ENSPKIG00000008116) ENSPKIG00000008149 ENSPKIG00000008189 #19 RAPH1 (ENSPKIG00000008230) #14 ABI2 (ENSPKIG00000008314) #13 cyp20a1 (ENSPKIG00000008410) #12 TMEM237 (ENSPKIG00000008472) MPP4 (ENSPKIG00000008511) ALS2 (ENSPKIG00000008582) ENSPKIG00000008738 FZD7 (ENSPKIG00000008751) ENSPKIG00000008769 sumo1 (ENSPKIG00000008789) Clupeocephala DUPLICATION Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 3 ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156160.b.b ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #19 ENSGT00940000178309 ENSGT00940000174369 ENSGT00940000156552.c.a #14 ENSGT00940000156089.f #13 ENSGT00940000156089.e.b #13 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.a ENSGT00390000013916 #10 Euteleosteomorpha ANCESTRAL SPECIES 303 ENSGT00550000075037 ENSGT00940000160059.a.b.a ENSGT00390000004553 ENSGT00940000155126.s.a ENSGT00940000161508.b ENSGT00390000003338 ENSGT00940000168433 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 Acanthomorphata ANCESTRAL SPECIES 149 ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT01030000235142 ENSGT00940000165586.a ENSGT00940000163794 ENSGT01030000234640.a.a.c.b Cod MODERN SPECIES 12 ENSGMOG00000024326 ENSGMOG00000026996 SLC40A1 (ENSGMOG00000002288) ENSGMOG00000031663 ENSGMOG00000033745 hao2 (ENSGMOG00000002592) wars2 (ENSGMOG00000032164) tbx15 (ENSGMOG00000025205) ENSGMOG00000032281 wdr3 (ENSGMOG00000002962) gdap2 (ENSGMOG00000003020) tent5c (ENSGMOG00000007342) ENSGMOG00000023329 ENSGMOG00000007873 ENSGMOG00000023342 #21 ENSGMOG00000012609 #22 epb41l5 (ENSGMOG00000012613) ptpn4a (ENSGMOG00000012617) tmem177 (ENSGMOG00000012622) ENSGMOG00000012623 ENSGMOG00000006442 ENSGMOG00000030948 hdac4 (ENSGMOG00000005976) twist2 (ENSGMOG00000005968) ENSGMOG00000034506 traf3ip1 (ENSGMOG00000005943) agr1 (ENSGMOG00000034712) ENSGMOG00000005924 ENSGMOG00000024607 ENSGMOG00000031000 ENSGMOG00000029356 Euacanthomorphacea ANCESTRAL SPECIES 15 ENSGT00950000183038.a.b.b.b.r ENSGT00950000183165.a.a.b ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a ENSGT00940000163794 Pinecone sodierfish MODERN SPECIES 13 ENSMMDG00005023838 ENSMMDG00005023837 ENSMMDG00005023835 WNT6 (ENSMMDG00005023833) wnt10a (ENSMMDG00005023832) ENSMMDG00005023829 ENSMMDG00005023828 fev (ENSMMDG00005023827) cryba2b (ENSMMDG00005023825) umps (ENSMMDG00005023818) fn1a (ENSMMDG00005016586) ENSMMDG00005016265 ENSMMDG00005016261 ENSMMDG00005016257 #21 ENSMMDG00005016255 #21 nrp2b (ENSMMDG00005016249) #22 epb41l5 (ENSMMDG00005016153) ptpn4a (ENSMMDG00005015701) tmem177 (ENSMMDG00005015667) MRAS (ENSMMDG00005015654) pth2ra (ENSMMDG00005015640) ENSMMDG00005015629 ENSMMDG00005015621 tmem163a (ENSMMDG00005015619) acmsd (ENSMMDG00005015615) ccnt2a (ENSMMDG00005015604) ENSMMDG00005015599 ramp1 (ENSMMDG00005015595) ube2f (ENSMMDG00005015591) zgc:162780 (ENSMMDG00005015590) ENSMMDG00005015588 Percomorphaceae ANCESTRAL SPECIES 29 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a ENSGT00940000163794 Tiger tail seahorse MODERN SPECIES 313 TMEM169 (ENSHCOG00000017761) xrcc5 (ENSHCOG00000017773) COL6A2 (ENSHCOG00000017794) MARCHF4 (ENSHCOG00000017906) SMARCAL1 (ENSHCOG00000017921) ENSHCOG00000017928 nme9 (ENSHCOG00000017975) zgc:162707 (ENSHCOG00000017988) ehhadh (ENSHCOG00000018012) tmem41aa (ENSHCOG00000018036) igf2bp2a (ENSHCOG00000018090) ANKZF1 (ENSHCOG00000018225) glb1l (ENSHCOG00000018244) ENSHCOG00000018260 ENSHCOG00000018273 #21 nrp2b (ENSHCOG00000018329) #22 epb41l5 (ENSHCOG00000018374) ptpn4a (ENSHCOG00000018430) tmem177 (ENSHCOG00000018441) MRAS (ENSHCOG00000018456) ALS2 (ENSHCOG00000018508) fzd7b (ENSHCOG00000018538) ENSHCOG00000018620 ENSHCOG00000018634 ENSHCOG00000018646 ENSHCOG00000018666 ENSHCOG00000018675 ENSHCOG00000018719 agpat3 (ENSHCOG00000018746) pdxka (ENSHCOG00000018782) CHPF (ENSHCOG00000018799) Percomorphaceae_B ANCESTRAL SPECIES 17 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Ovalentaria ANCESTRAL SPECIES 14 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a Atherinomorphae ANCESTRAL SPECIES 13 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Cyprinodontiformes ANCESTRAL SPECIES 15 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.e ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Cyprinodontoidei ANCESTRAL SPECIES 13 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.e ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Poeciliinae ANCESTRAL SPECIES 25 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.e ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Poecilia ANCESTRAL SPECIES 13 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.f ENSGT00390000001170.a.a.e ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 NAME_6 ANCESTRAL SPECIES 186 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f Sailfin molly MODERN SPECIES 17 ENSPLAG00000021605 WNT6 (ENSPLAG00000021598) wnt10a (ENSPLAG00000021584) ENSPLAG00000021575 cdk5r2b (ENSPLAG00000021570) fev (ENSPLAG00000021560) cryba2b (ENSPLAG00000021553) umps (ENSPLAG00000021538) fn1a (ENSPLAG00000021511) ENSPLAG00000021418 ENSPLAG00000021402 #21 ENSPLAG00000021390 #21 ENSPLAG00000021379 #21 nrp2b (ENSPLAG00000021352) #22 ENSPLAG00000021286 Amazon molly MODERN SPECIES 390 ENSPFOG00000022068 ENSPFOG00000001549 BZW1 (ENSPFOG00000003280) MYO1B (ENSPFOG00000003543) ENSPFOG00000004283 ENSPFOG00000004430 WNT6 (ENSPFOG00000004515) wnt10a (ENSPFOG00000004587) cdk5r2b (ENSPFOG00000020110) fev (ENSPFOG00000004658) cryba2b (ENSPFOG00000004669) umps (ENSPFOG00000004713) fn1a (ENSPFOG00000004906) ENSPFOG00000005693 ENSPFOG00000005714 #21 nrp2b (ENSPFOG00000005868) #22 epb41l5 (ENSPFOG00000006337) ptpn4a (ENSPFOG00000006586) Guppy MODERN SPECIES 450 BZW1 (ENSPREG00000015136) MYO1B (ENSPREG00000015234) ENSPREG00000015450 ENSPREG00000015479 ENSPREG00000015568 WNT6 (ENSPREG00000015602) ENSPREG00000015606 wnt10a (ENSPREG00000015633) ENSPREG00000015696 ENSPREG00000015711 cryba2b (ENSPREG00000015716) umps (ENSPREG00000015746) fn1a (ENSPREG00000015770) ENSPREG00000015839 ENSPREG00000015865 #21 nrp2b (ENSPREG00000015894) #22 epb41l5 (ENSPREG00000015938) ptpn4a (ENSPREG00000016007) tmem177 (ENSPREG00000016091) MRAS (ENSPREG00000016102) pth2ra (ENSPREG00000016124) ENSPREG00000016179 ENSPREG00000016209 ENSPREG00000016217 tmem163a (ENSPREG00000016248) acmsd (ENSPREG00000016261) ccnt2a (ENSPREG00000016299) MAP3K19 (ENSPREG00000016430) ramp1 (ENSPREG00000016449) ube2f (ENSPREG00000016461) zgc:162780 (ENSPREG00000016480) Platyfish MODERN SPECIES 21 RALB (ENSXMAG00000023293) LRP1B (ENSXMAG00000011528) BZW1 (ENSXMAG00000010531) MYO1B (ENSXMAG00000016513) ENSXMAG00000027035 ENSXMAG00000027986 WNT6 (ENSXMAG00000001793) wnt10a (ENSXMAG00000024708) cdk5r2b (ENSXMAG00000020059) ENSXMAG00000001805 cryba2b (ENSXMAG00000001807) umps (ENSXMAG00000001814) fn1a (ENSXMAG00000001821) ENSXMAG00000028842 ENSXMAG00000001893 #21 nrp2b (ENSXMAG00000001898) #22 epb41l5 (ENSXMAG00000001914) ptpn4a (ENSXMAG00000001932) tmem177 (ENSXMAG00000001961) MRAS (ENSXMAG00000001962) pth2ra (ENSXMAG00000001976) ENSXMAG00000021128 ENSXMAG00000002001 tmem163a (ENSXMAG00000007867) acmsd (ENSXMAG00000002018) ccnt2a (ENSXMAG00000002028) ENSXMAG00000024116 ENSXMAG00000024285 ramp1 (ENSXMAG00000002037) ENSXMAG00000022621 ube2f (ENSXMAG00000002039) NAME_4 ANCESTRAL SPECIES 81 ENSGT00940000155752 ENSGT00940000164719 ENSGT00940000177930 ENSGT01030000234607.A.a.a.a.d ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.e ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a ENSGT00940000163794 ENSGT00950000183023.A.f.a.b.b.t.b Mummichog MODERN SPECIES 2500 ENSFHEG00000004172 ENSFHEG00000004179 umps (ENSFHEG00000004188) fn1a (ENSFHEG00000008680) ENSFHEG00000008933 ENSFHEG00000008950 #21 nrp2b (ENSFHEG00000008974) #22 epb41l5 (ENSFHEG00000009006) ptpn4a (ENSFHEG00000009074) Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 500 WNT6 (ENSCVAG00000007287) wnt10a (ENSCVAG00000007307) cdk5r2b (ENSCVAG00000007323) fev (ENSCVAG00000007332) cryba2b (ENSCVAG00000007344) umps (ENSCVAG00000007359) fn1a (ENSCVAG00000011892) ENSCVAG00000011979 ENSCVAG00000011990 #21 ENSCVAG00000012006 #21 ENSCVAG00000012023 #22 Sheepshead minnow MODERN SPECIES 1997 nrp2b (ENSCVAG00000001921) #22 Aplocheiloidei ANCESTRAL SPECIES 48 ENSGT00950000183058.A.a.d ENSGT00950000183058.A.b.b ENSGT00390000018895.a ENSGT00390000000155.a.a ENSGT00940000175225 ENSGT01090000259985.b.b.a.a.l ENSGT01090000259985.b.b.a.b ENSGT00390000010218 ENSGT00550000075037 ENSGT00940000164719.b ENSGT00390000004553 ENSGT00940000168433 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a.f #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.e ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a ENSGT00940000163794 Mangrove rivulus MODERN SPECIES 54 ENSKMAG00000015958 LRP1B (ENSKMAG00000016057) BZW1 (ENSKMAG00000016408) MYO1B (ENSKMAG00000016504) ENSKMAG00000016838 ENSKMAG00000016853 WNT6 (ENSKMAG00000016866) wnt10a (ENSKMAG00000016880) cdk5r2b (ENSKMAG00000016892) fev (ENSKMAG00000016896) cryba2b (ENSKMAG00000016906) umps (ENSKMAG00000016976) fn1a (ENSKMAG00000017093) ENSKMAG00000017534 ENSKMAG00000017559 #21 nrp2b (ENSKMAG00000017635) #22 epb41l5 (ENSKMAG00000017717) ptpn4a (ENSKMAG00000017779) tmem177 (ENSKMAG00000017878) mras (ENSKMAG00000017893) pth2ra (ENSKMAG00000017976) ENSKMAG00000018125 tmem163a (ENSKMAG00000018154) acmsd (ENSKMAG00000018206) ccnt2a (ENSKMAG00000018253) MAP3K19 (ENSKMAG00000018284) ramp1 (ENSKMAG00000018344) ube2f (ENSKMAG00000018359) zgc:162780 (ENSKMAG00000018418) zgc:162396 (ENSKMAG00000018426) ENSKMAG00000018445 Turquoise killifish MODERN SPECIES 1623 ENSNFUG00015022925 ENSNFUG00015022917 ENSNFUG00015022884 WNT6B (ENSNFUG00015022875) wnt10a (ENSNFUG00015022870) ENSNFUG00015022866 CDK5R2B (ENSNFUG00015022863) ENSNFUG00015022860 cryba2b (ENSNFUG00015022856) umps (ENSNFUG00015022850) FN1 (ENSNFUG00015020678) ENSNFUG00015020593 ENSNFUG00015020592 ENSNFUG00015020585 #21 ENSNFUG00015020577 nrp2b (ENSNFUG00015019291) #22 ENSNFUG00015019259 epb41l5 (ENSNFUG00015019190) PTPN4A (ENSNFUG00015019139) TMEM177 (ENSNFUG00015019125) MRAS (ENSNFUG00015019107) pth2ra (ENSNFUG00015018783) ENSNFUG00015018765 ENSNFUG00015018503 TMEM163A (ENSNFUG00015018496) acmsd (ENSNFUG00015018394) ccnt2a (ENSNFUG00015018257) MAP3K19 (ENSNFUG00015018126) ENSNFUG00015018121 ENSNFUG00015018103 SNX4 (ENSNFUG00015017979) Oryzias ANCESTRAL SPECIES 10 ENSGT00940000158887 ENSGT00940000157018 ENSGT01030000234748 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00390000003874.a.a ENSGT00950000182836.b.b.b.a ENSGT00940000162556.A.b ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00390000011821 ENSGT00940000159245 ENSGT00390000012174 ENSGT00390000008902.kb ENSGT00390000012196 ENSGT00940000159505 ENSGT00940000158589.b.a ENSGT00940000173884 ENSGT00390000011294 ENSGT00390000008142 ENSGT00580000081600.c.b ENSGT00940000160811.c.a Oryzias_b ANCESTRAL SPECIES 40 ENSGT00940000158887 ENSGT01030000234748 ENSGT00940000157018 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00390000003874.a.a ENSGT00950000182836.b.b.b.a ENSGT00940000162556.A.b ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00390000011821 ENSGT00940000159245 ENSGT00390000012174 ENSGT00390000008902.kb ENSGT00390000012196 ENSGT00940000159505 ENSGT00940000158589.b.a ENSGT00940000173884 ENSGT00390000011294 ENSGT00390000008142 ENSGT00580000081600.c.b ENSGT00940000160811.c.a Indian medaka MODERN SPECIES 18 ENSOMEG00000016114 gmppaa (ENSOMEG00000016142) asic4a (ENSOMEG00000016180) CHPF (ENSOMEG00000016218) pdxka (ENSOMEG00000016303) agpat3 (ENSOMEG00000016351) ENSOMEG00000016384 cdk5r2b (ENSOMEG00000016402) fev (ENSOMEG00000016410) cryba2b (ENSOMEG00000016427) umps (ENSOMEG00000016459) fn1a (ENSOMEG00000016544) ENSOMEG00000016575 ENSOMEG00000016682 #21 ENSOMEG00000016701 nrp2b (ENSOMEG00000016727) #22 epb41l5 (ENSOMEG00000016756) ENSOMEG00000016774 ptpn4a (ENSOMEG00000016814) tmem177 (ENSOMEG00000016831) ENSOMEG00000016910 slc37a1 (ENSOMEG00000016960) wdr4 (ENSOMEG00000016985) ENSOMEG00000017009 ENSOMEG00000017019 pknox1.1 (ENSOMEG00000017074) ENSOMEG00000017105 ENSOMEG00000017123 ccdc93 (ENSOMEG00000017201) si:dkey-251i10.3 (ENSOMEG00000017220) insig2 (ENSOMEG00000017239) Javanese ricefish MODERN SPECIES 13 ENSOJAG00000023512 pnkd (ENSOJAG00000023519) ENSOJAG00000023534 asic4a (ENSOJAG00000023538) ENSOJAG00000023541 CHPF (ENSOJAG00000023548) PDXK (ENSOJAG00000023552) agpat3 (ENSOJAG00000023558) ENSOJAG00000023565 ENSOJAG00000023567 fev (ENSOJAG00000023571) cryba2b (ENSOJAG00000023576) ENSOJAG00000023783 ENSOJAG00000023785 #21 ENSOJAG00000023787 nrp2b (ENSOJAG00000023793) #22 ENSOJAG00000023800 epb41l5 (ENSOJAG00000023802) ENSOJAG00000023812 tmem177 (ENSOJAG00000023817) ENSOJAG00000023821 slc37a1 (ENSOJAG00000023831) ENSOJAG00000023837 WDR4 (ENSOJAG00000023838) ENSOJAG00000003518 ENSOJAG00000003543 pknox1.1 (ENSOJAG00000003551) ENSOJAG00000003579 ENSOJAG00000003760 ccdc93 (ENSOJAG00000004030) si:dkey-251i10.3 (ENSOJAG00000005827) Oryzias_a ANCESTRAL SPECIES 58 ENSGT01050000244890.a.b.a.i.b ENSGT00940000158887 ENSGT00940000157018 ENSGT01030000234748 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00390000003874.a.a ENSGT00950000182836.b.b.b.a ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000159245 ENSGT00390000012174 ENSGT00390000008902.kb ENSGT00940000175678 ENSGT00940000159505 ENSGT00940000158589.b.a Chinese medaka MODERN SPECIES 1040 ENSOSIG00000021094 #22 Japanese Medaka HdrR MODERN SPECIES 13 cdk5r2b (ENSORLG00000020537) fev (ENSORLG00000029519) cryba2b (ENSORLG00000020544) umps (ENSORLG00000020552) fn1a (ENSORLG00000020577) ENSORLG00000028926 ENSORLG00000029898 #21 ENSORLG00000023693 #21 ENSORLG00000022281 #21 ENSORLG00000029727 ENSORLG00000026352 ENSORLG00000021788 ENSORLG00000025687 ENSORLG00000022794 ENSORLG00000028758 ENSORLG00000020849 #22 epb41l5 (ENSORLG00000020848) ptpn4a (ENSORLG00000020845) ENSORLG00000027868 tmem177 (ENSORLG00000020842) ENSORLG00000020840 ENSORLG00000025686 slc37a1 (ENSORLG00000020837) wdr4 (ENSORLG00000020836) ENSORLG00000022790 ENSORLG00000023159 pknox1.1 (ENSORLG00000020833) TMPRSS3 (ENSORLG00000022129) ENSORLG00000024799 ENSORLG00000027622 Ovalentaria_B ANCESTRAL SPECIES 12 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00940000177376 ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a Cichlidae ANCESTRAL SPECIES 14 ENSGT00940000155752 ENSGT00940000164719 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a ENSGT00940000163794 Pseudocrenilabrinae ANCESTRAL SPECIES 15 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a ENSGT00940000163794 Pseudocrenilabrinae_A ANCESTRAL SPECIES 14 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000177930 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a ENSGT00940000163794 Haplochromini ANCESTRAL SPECIES 19 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a ENSGT00940000163794 Burton s mouthbrooder MODERN SPECIES 344 RALB (ENSHBUG00000018969) LRP1B (ENSHBUG00000018946) BZW1 (ENSHBUG00000018698) MYO1B (ENSHBUG00000018661) ENSHBUG00000018579 ENSHBUG00000001073 WNT6 (ENSHBUG00000018487) wnt10a (ENSHBUG00000018452) cdk5r2b (ENSHBUG00000018436) fev (ENSHBUG00000018421) cryba2b (ENSHBUG00000018405) umps (ENSHBUG00000018390) fn1a (ENSHBUG00000018377) ENSHBUG00000018248 ENSHBUG00000018232 #21 nrp2b (ENSHBUG00000018197) #22 epb41l5 (ENSHBUG00000018101) ptpn4a (ENSHBUG00000018046) tmem177 (ENSHBUG00000000974) MRAS (ENSHBUG00000017973) pth2ra (ENSHBUG00000017946) tmem163a (ENSHBUG00000017912) acmsd (ENSHBUG00000017896) ccnt2a (ENSHBUG00000017850) ENSHBUG00000017764 ramp1 (ENSHBUG00000017748) ube2f (ENSHBUG00000017716) zgc:162780 (ENSHBUG00000000524) zgc:162396 (ENSHBUG00000017584) ENSHBUG00000017565 Haplochromini_A ANCESTRAL SPECIES 19 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a ENSGT00940000163794 P. nyererei MODERN SPECIES 430 LRP1B (ENSPNYG00000006319) BZW1 (ENSPNYG00000006245) MYO1B (ENSPNYG00000006160) mnx2a (ENSPNYG00000006079) ENSPNYG00000006042 ENSPNYG00000006000 WNT6 (ENSPNYG00000005978) wnt10a (ENSPNYG00000005950) cdk5r2b (ENSPNYG00000005938) fev (ENSPNYG00000005923) cryba2b (ENSPNYG00000005892) umps (ENSPNYG00000005838) fn1a (ENSPNYG00000005692) ENSPNYG00000005662 #21 ENSPNYG00000005648 #21 nrp2b (ENSPNYG00000005599) #22 epb41l5 (ENSPNYG00000005555) ptpn4a (ENSPNYG00000005464) tmem177 (ENSPNYG00000005436) MRAS (ENSPNYG00000005416) Haplochromini_B ANCESTRAL SPECIES 39 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a ENSGT00940000163794 ENSGT01030000234640.a.a.c.b Zebra mbuna MODERN SPECIES 1098 nepro (ENSMZEG00005002507) RALB (ENSMZEG00005002487) LRP1B (ENSMZEG00005002258) BZW1 (ENSMZEG00005002198) MYO1B (ENSMZEG00005002144) ENSMZEG00005002024 ENSMZEG00005002006 WNT6 (ENSMZEG00005001991) wnt10a (ENSMZEG00005001979) cdk5r2b (ENSMZEG00005001970) fev (ENSMZEG00005001960) cryba2b (ENSMZEG00005001946) umps (ENSMZEG00005001923) fn1a (ENSMZEG00005001851) ENSMZEG00005001789 #21 nrp2b (ENSMZEG00005001691) #22 epb41l5 (ENSMZEG00005001677) ptpn4a (ENSMZEG00005001562) tmem177 (ENSMZEG00005001546) MRAS (ENSMZEG00005001534) pth2ra (ENSMZEG00005001481) ENSMZEG00005001468 tmem163a (ENSMZEG00005001445) acmsd (ENSMZEG00005001427) ccnt2a (ENSMZEG00005001394) ENSMZEG00005000887 ramp1 (ENSMZEG00005000875) ube2f (ENSMZEG00005000845) zgc:162780 (ENSMZEG00005000825) zgc:162396 (ENSMZEG00005000798) ENSMZEG00005000664 Eastern happy MODERN SPECIES 7 BZW1 (ENSACLG00000008855) ENSACLG00000008844 ENSACLG00000008838 mnx2a (ENSACLG00000008742) ENSACLG00000008622 ENSACLG00000008619 WNT6 (ENSACLG00000008605) wnt10a (ENSACLG00000008596) cdk5r2b (ENSACLG00000008590) fev (ENSACLG00000008580) cryba2b (ENSACLG00000008557) umps (ENSACLG00000008544) fn1a (ENSACLG00000008496) ENSACLG00000008492 ENSACLG00000007943 #21 nrp2b (ENSACLG00000007905) #22 epb41l5 (ENSACLG00000007894) ptpn4a (ENSACLG00000007832) tmem177 (ENSACLG00000007814) MRAS (ENSACLG00000007804) pth2ra (ENSACLG00000007767) ENSACLG00000007728 tmem163a (ENSACLG00000007268) acmsd (ENSACLG00000007229) ccnt2a (ENSACLG00000007185) MAP3K19 (ENSACLG00000007155) ramp1 (ENSACLG00000007147) ube2f (ENSACLG00000007105) zgc:162780 (ENSACLG00000006922) zgc:162396 (ENSACLG00000006906) ENSACLG00000006902 Lyretail cichlid MODERN SPECIES 319 LRP1B (ENSNBRG00000012652) BZW1 (ENSNBRG00000012864) MYO1B (ENSNBRG00000012903) mnx2a (ENSNBRG00000012980) ENSNBRG00000013009 ENSNBRG00000013024 WNT6 (ENSNBRG00000013039) wnt10a (ENSNBRG00000013057) cdk5r2b (ENSNBRG00000013077) fev (ENSNBRG00000013088) cryba2b (ENSNBRG00000013114) umps (ENSNBRG00000013156) fn1a (ENSNBRG00000013355) ENSNBRG00000014151 ENSNBRG00000014184 #21 nrp2b (ENSNBRG00000014391) #22 epb41l5 (ENSNBRG00000014509) ptpn4a (ENSNBRG00000014547) tmem177 (ENSNBRG00000014602) MRAS (ENSNBRG00000014613) pth2ra (ENSNBRG00000014658) tmem163a (ENSNBRG00000014758) acmsd (ENSNBRG00000014777) ccnt2a (ENSNBRG00000014815) ENSNBRG00000014841 ramp1 (ENSNBRG00000014858) ube2f (ENSNBRG00000014872) zgc:162780 (ENSNBRG00000014908) zgc:162396 (ENSNBRG00000014954) ENSNBRG00000014975 ENSNBRG00000014998 Nile tilapia MODERN SPECIES 7 BZW1 (ENSONIG00000039517) MYO1B (ENSONIG00000004336) mnx2a (ENSONIG00000036548) ENSONIG00000035161 ENSONIG00000004359 WNT6 (ENSONIG00000004360) wnt10a (ENSONIG00000032469) cdk5r2b (ENSONIG00000021341) fev (ENSONIG00000037422) cryba2b (ENSONIG00000004364) umps (ENSONIG00000004366) fn1a (ENSONIG00000004372) ENSONIG00000026458 ENSONIG00000004391 #21 ENSONIG00000034750 nrp2b (ENSONIG00000004396) #22 ENSONIG00000038574 epb41l5 (ENSONIG00000004414) ptpn4a (ENSONIG00000004426) tmem177 (ENSONIG00000004446) MRAS (ENSONIG00000004448) pth2ra (ENSONIG00000004451) ENSONIG00000028529 ENSONIG00000032164 tmem163a (ENSONIG00000004454) acmsd (ENSONIG00000004455) ccnt2a (ENSONIG00000004456) MAP3K19 (ENSONIG00000039678) ramp1 (ENSONIG00000030721) ube2f (ENSONIG00000004459) zgc:162780 (ENSONIG00000004462) Midas cichlid MODERN SPECIES 905 ENSACIG00000012860 fn1a (ENSACIG00000013031) ENSACIG00000014790 #21 ENSACIG00000014969 nrp2b (ENSACIG00000014978) #22 epb41l5 (ENSACIG00000015021) ptpn4a (ENSACIG00000015056) tmem177 (ENSACIG00000015109) MRAS (ENSACIG00000015128) pth2ra (ENSACIG00000015144) ENSACIG00000015193 tmem163a (ENSACIG00000015200) acmsd (ENSACIG00000015216) ccnt2a (ENSACIG00000015242) ENSACIG00000015273 ramp1 (ENSACIG00000015368) ube2f (ENSACIG00000015390) zgc:162780 (ENSACIG00000015409) zgc:162396 (ENSACIG00000015427) zgc:162396 (ENSACIG00000015445) Pomacentridae ANCESTRAL SPECIES 17 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Pomacentridae_A ANCESTRAL SPECIES 14 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Amphiprion ANCESTRAL SPECIES 8 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Orange clownfish MODERN SPECIES 3 ENSAPEG00000010352 ENSAPEG00000010098 ENSAPEG00000010056 WNT6 (ENSAPEG00000010032) wnt10a (ENSAPEG00000010000) cdk5r2b (ENSAPEG00000009975) fev (ENSAPEG00000009962) cryba2b (ENSAPEG00000009942) umps (ENSAPEG00000009890) ENSAPEG00000009869 fn1a (ENSAPEG00000009679) ENSAPEG00000009657 ENSAPEG00000009587 ENSAPEG00000009565 #21 ENSAPEG00000009513 #21 nrp2b (ENSAPEG00000009440) #22 epb41l5 (ENSAPEG00000009152) epb41l5 (ENSAPEG00000009079) ptpn4a (ENSAPEG00000008973) tmem177 (ENSAPEG00000008953) ENSAPEG00000008948 MRAS (ENSAPEG00000008940) pth2ra (ENSAPEG00000008903) ENSAPEG00000008803 ENSAPEG00000008554 tmem163a (ENSAPEG00000008508) acmsd (ENSAPEG00000008464) ccnt2a (ENSAPEG00000008355) ENSAPEG00000008294 ramp1 (ENSAPEG00000008272) ube2f (ENSAPEG00000008243) Clown anemonefish MODERN SPECIES 1510 ENSAOCG00000018422 ENSAOCG00000018410 ENSAOCG00000018371 #21 ENSAOCG00000018338 #21 nrp2b (ENSAOCG00000018105) #22 Spiny chromis MODERN SPECIES 590 nrp2b (ENSAPOG00000001422) #22 epb41l5 (ENSAPOG00000001402) ptpn4a (ENSAPOG00000001379) tmem177 (ENSAPOG00000001361) ENSAPOG00000001360 MRAS (ENSAPOG00000001356) pth2ra (ENSAPOG00000001353) ENSAPOG00000001346 ENSAPOG00000001340 Bicolor damselfish MODERN SPECIES 1349 nrp2b (ENSSPAG00000018574) #22 epb41l5 (ENSSPAG00000018654) ptpn4a (ENSSPAG00000018790) Percomorphaceae_C ANCESTRAL SPECIES 13 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Eupercaria ANCESTRAL SPECIES 25 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Tetraodontidae ANCESTRAL SPECIES ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000163794.h ENSGT00940000163794.g.a ENSGT01030000234640.a.a.c.b Fugu MODERN SPECIES nepro (ENSTRUG00000020076) RALB (ENSTRUG00000006857) BZW1 (ENSTRUG00000005576) MYO1B (ENSTRUG00000004277) ENSTRUG00000004181 ENSTRUG00000021136 WNT6 (ENSTRUG00000022464) wnt10a (ENSTRUG00000003255) ENSTRUG00000031853 fev (ENSTRUG00000003136) cryba2b (ENSTRUG00000002508) umps (ENSTRUG00000002053) fn1a (ENSTRUG00000001374) ENSTRUG00000001358 ENSTRUG00000002389 #21 nrp2b (ENSTRUG00000003723) #22 epb41l5 (ENSTRUG00000005009) ptpn4a (ENSTRUG00000005419) tmem177 (ENSTRUG00000023228) mras (ENSTRUG00000032019) pth2 (ENSTRUG00000006000) ENSTRUG00000008190 tmem163a (ENSTRUG00000008099) acmsd (ENSTRUG00000007957) ccnt2a (ENSTRUG00000023299) MAP3K19 (ENSTRUG00000026412) ramp1 (ENSTRUG00000007700) ube2f (ENSTRUG00000007527) zgc:162396 (ENSTRUG00000010648) ENSTRUG00000032205 ENSTRUG00000026622 Tetraodon MODERN SPECIES 13 LRP1B (ENSTNIG00000017043) BZW1 (ENSTNIG00000017044) MYO1B (ENSTNIG00000017045) ENSTNIG00000017046 ENSTNIG00000001742 ENSTNIG00000017047 WNT6 (ENSTNIG00000017048) wnt10a (ENSTNIG00000017049) cdk5r2b (ENSTNIG00000001286) fev (ENSTNIG00000017050) cryba2b (ENSTNIG00000017051) umps (ENSTNIG00000017052) fn1a (ENSTNIG00000017053) ENSTNIG00000001642 ENSTNIG00000017054 #21 nrp2b (ENSTNIG00000007570) #22 epb41l5 (ENSTNIG00000007569) ptpn4a (ENSTNIG00000007568) tmem177 (ENSTNIG00000007567) MRAS (ENSTNIG00000007566) pth2ra (ENSTNIG00000007565) acmsd (ENSTNIG00000007564) ccnt2a (ENSTNIG00000007563) ENSTNIG00000007562 ramp1 (ENSTNIG00000007561) ube2f (ENSTNIG00000007560) ENSTNIG00000007559 zgc:162396 (ENSTNIG00000001485) ENSTNIG00000001712 ENSTNIG00000000966 ADARB1 (ENSTNIG00000008894) Eupecaria_A ANCESTRAL SPECIES 24 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Ballan wrasse MODERN SPECIES 291 nrp2b (ENSLBEG00000025885) #22 epb41l5 (ENSLBEG00000025834) ptpn4a (ENSLBEG00000025764) tmem177 (ENSLBEG00000025720) MRAS (ENSLBEG00000025705) pth2ra (ENSLBEG00000025677) ENSLBEG00000025613 ENSLBEG00000025550 tmem163a (ENSLBEG00000025518) acmsd (ENSLBEG00000025475) ccnt2a (ENSLBEG00000025440) ENSLBEG00000025386 Eupecaria_B ANCESTRAL SPECIES 24 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Eupecaria_C ANCESTRAL SPECIES 24 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Gilthead seabream MODERN SPECIES 23 BZW1 (ENSSAUG00010004726) MYO1B (ENSSAUG00010004914) ENSSAUG00010009001 ENSSAUG00010009005 ENSSAUG00010009018 WNT6 (ENSSAUG00010009019) wnt10a (ENSSAUG00010009021) cdk5r2b (ENSSAUG00010009022) fev (ENSSAUG00010009023) cryba2b (ENSSAUG00010009024) umps (ENSSAUG00010009026) fn1a (ENSSAUG00010009061) ENSSAUG00010010189 ENSSAUG00010010190 ENSSAUG00010010192 #21 nrp2b (ENSSAUG00010010220) #22 epb41l5 (ENSSAUG00010012341) ptpn4a (ENSSAUG00010012414) tmem177 (ENSSAUG00010012606) ENSSAUG00010012609 MRAS (ENSSAUG00010012612) pth2ra (ENSSAUG00010012615) ENSSAUG00010012650 ENSSAUG00010012656 tmem163a (ENSSAUG00010012666) acmsd (ENSSAUG00010012673) ccnt2a (ENSSAUG00010012679) ENSSAUG00010012688 ramp1 (ENSSAUG00010012699) ube2f (ENSSAUG00010012700) zgc:162780 (ENSSAUG00010012702) Eupercaria_incertae_sedis ANCESTRAL SPECIES 24 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Large yellow croaker MODERN SPECIES 490 LRP1B (ENSLCRG00005020331) BZW1 (ENSLCRG00005020277) MYO1B (ENSLCRG00005020255) ENSLCRG00005020244 ENSLCRG00005020241 WNT6 (ENSLCRG00005020239) wnt10a (ENSLCRG00005020237) cdk5r2b (ENSLCRG00005020236) fev (ENSLCRG00005020233) cryba2b (ENSLCRG00005020230) umps (ENSLCRG00005020227) fn1a (ENSLCRG00005009972) ENSLCRG00005009866 ENSLCRG00005009860 ENSLCRG00005009846 #21 nrp2b (ENSLCRG00005009196) #22 epb41l5 (ENSLCRG00005009116) ptpn4a (ENSLCRG00005009097) tmem177 (ENSLCRG00005009093) ENSLCRG00005009091 MRAS (ENSLCRG00005009090) pth2ra (ENSLCRG00005009081) ENSLCRG00005009076 tmem163a (ENSLCRG00005009073) acmsd (ENSLCRG00005009053) ENSLCRG00005009050 ccnt2a (ENSLCRG00005008833) ENSLCRG00005008825 ramp1 (ENSLCRG00005008824) ENSLCRG00005008823 ube2f (ENSLCRG00005008819) European seabass MODERN SPECIES 5 ENSDLAG00005018867 ENSDLAG00005018786 ENSDLAG00005016648 ENSDLAG00005033314 ENSDLAG00005016565 WNT6 (ENSDLAG00005028524) wnt10a (ENSDLAG00005016532) cdk5r2b (ENSDLAG00005016521) fev (ENSDLAG00005029495) cryba2b (ENSDLAG00005033399) umps (ENSDLAG00005016251) ENSDLAG00005014378 ENSDLAG00005034629 ENSDLAG00005014284 ENSDLAG00005014196 #21 ENSDLAG00005035118 #22 epb41l5 (ENSDLAG00005014094) ENSDLAG00005013780 ENSDLAG00005030809 ENSDLAG00005013762 ENSDLAG00005013612 ENSDLAG00005013553 ENSDLAG00005013344 tmem163a (ENSDLAG00005027257) acmsd (ENSDLAG00005013226) ENSDLAG00005013136 ccnt2a (ENSDLAG00005032702) ENSDLAG00005013114 ube2f (ENSDLAG00005013086) ENSDLAG00005029675 ENSDLAG00005027376 Perciformes ANCESTRAL SPECIES 23 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.h ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Perciformes_a ANCESTRAL SPECIES 23 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.h ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a ENSGT00940000163794 Channel bull blenny MODERN SPECIES 13 ENSCGOG00000017473 ENSCGOG00000017471 ENSCGOG00000017464 ENSCGOG00000017461 WNT6 (ENSCGOG00000017458) wnt10a (ENSCGOG00000017451) cdk5r2b (ENSCGOG00000017449) fev (ENSCGOG00000017448) cryba2b (ENSCGOG00000017440) umps (ENSCGOG00000017423) fn1a (ENSCGOG00000016623) ENSCGOG00000016596 CPO (ENSCGOG00000016592) ENSCGOG00000016587 #21 ENSCGOG00000016585 nrp2b (ENSCGOG00000015388) #22 epb41l5 (ENSCGOG00000014584) ptpn4a (ENSCGOG00000014011) tmem177 (ENSCGOG00000014003) MRAS (ENSCGOG00000014001) pth2ra (ENSCGOG00000013842) ENSCGOG00000013809 ENSCGOG00000013790 ENSCGOG00000013782 tmem163a (ENSCGOG00000013778) acmsd (ENSCGOG00000013763) ccnt2a (ENSCGOG00000013482) ENSCGOG00000013475 ramp1 (ENSCGOG00000013471) ube2f (ENSCGOG00000013469) zgc:162780 (ENSCGOG00000013468) Pike perch MODERN SPECIES 57 RALB (ENSSLUG00000002676) LRP1B (ENSSLUG00000002688) BZW1 (ENSSLUG00000002722) MYO1B (ENSSLUG00000002916) ENSSLUG00000006332 ENSSLUG00000006355 WNT6 (ENSSLUG00000006365) wnt10a (ENSSLUG00000006369) cdk5r2b (ENSSLUG00000006375) fev (ENSSLUG00000006380) cryba2b (ENSSLUG00000006395) umps (ENSSLUG00000006433) fn1a (ENSSLUG00000006503) ENSSLUG00000007495 ENSSLUG00000007517 #21 nrp2b (ENSSLUG00000007719) #22 epb41l5 (ENSSLUG00000010910) ptpn4a (ENSSLUG00000010922) tmem177 (ENSSLUG00000010936) ENSSLUG00000010938 ENSSLUG00000010940 MRAS (ENSSLUG00000010942) pth2ra (ENSSLUG00000010943) ENSSLUG00000010948 ENSSLUG00000010961 TMEM163 (ENSSLUG00000010973) Cottioidei ANCESTRAL SPECIES 14 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT01030000234640.a.b.a.a.a.a.a.b.a.a.a ENSGT01030000234640.a.b.a.a.a.a.a.a ENSGT00940000156444.d ENSGT00390000005159.i ENSGT00940000156089.e.b #13 ENSGT00390000006356 ENSGT00950000183097.a.a.b ENSGT00550000075118.l ENSGT00960000191502 Lumpfish MODERN SPECIES 13 BZW1 (ENSCLMG00005017429) MYO1B (ENSCLMG00005017521) ENSCLMG00005017740 ENSCLMG00005017750 WNT6 (ENSCLMG00005017757) wnt10a (ENSCLMG00005017759) cdk5r2b (ENSCLMG00005017762) fev (ENSCLMG00005017765) cryba2b (ENSCLMG00005017766) umps (ENSCLMG00005017772) fn1a (ENSCLMG00005018201) ENSCLMG00005020690 ENSCLMG00005020714 ENSCLMG00005020715 ENSCLMG00005020718 #21 NRP2 (ENSCLMG00005020735) #22 epb41l5 (ENSCLMG00005020797) ptpn4a (ENSCLMG00005020800) tmem177 (ENSCLMG00005020802) ENSCLMG00005020803 MRAS (ENSCLMG00005020804) pth2ra (ENSCLMG00005020806) ENSCLMG00005020807 ENSCLMG00005020808 ENSCLMG00005020810 ENSCLMG00005020811 ENSCLMG00005020812 ENSCLMG00005020813 ENSCLMG00005020814 ENSCLMG00005020816 MPP4 (ENSCLMG00005020817) Stickleback MODERN SPECIES 16 RALB (ENSGACG00000007498) LRP1B (ENSGACG00000007503) BZW1 (ENSGACG00000007556) MYO1B (ENSGACG00000007578) ENSGACG00000007589 WNT6 (ENSGACG00000007593) wnt10a (ENSGACG00000007605) cdk5r2b (ENSGACG00000007612) fev (ENSGACG00000007619) cryba2b (ENSGACG00000007624) umps (ENSGACG00000007660) fn1a (ENSGACG00000007714) ENSGACG00000007737 ENSGACG00000007739 ENSGACG00000007753 #21 nrp2b (ENSGACG00000007758) #22 epb41l5 (ENSGACG00000007774) ptpn4a (ENSGACG00000007798) tmem177 (ENSGACG00000007813) MRAS (ENSGACG00000007818) pth2ra (ENSGACG00000007845) ENSGACG00000007859 ENSGACG00000007864 ENSGACG00000007868 ENSGACG00000007870 ENSGACG00000007874 ENSGACG00000007875 ENSGACG00000007878 ENSGACG00000007880 ENSGACG00000007881 ENSGACG00000007886 Percomorphaceae_D ANCESTRAL SPECIES 12 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Anabantaria ANCESTRAL SPECIES 14 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Zig-zag eel MODERN SPECIES 13 ENSMAMG00000014694 ENSMAMG00000014621 ENSMAMG00000014613 ENSMAMG00000014546 WNT6 (ENSMAMG00000014507) wnt10a (ENSMAMG00000014474) cdk5r2b (ENSMAMG00000014465) fev (ENSMAMG00000014450) cryba2b (ENSMAMG00000014432) umps (ENSMAMG00000014385) ENSMAMG00000014337 ENSMAMG00000014293 ENSMAMG00000014257 ENSMAMG00000014199 ENSMAMG00000014135 #21 ENSMAMG00000013943 #22 ENSMAMG00000026386 epb41l5 (ENSMAMG00000013901) ptpn4a (ENSMAMG00000013766) tmem177 (ENSMAMG00000013743) MRAS (ENSMAMG00000024499) ENSMAMG00000013608 ENSMAMG00000025502 tmem163a (ENSMAMG00000027963) acmsd (ENSMAMG00000013500) ccnt2a (ENSMAMG00000013387) ENSMAMG00000025754 ENSMAMG00000013315 ramp1 (ENSMAMG00000013305) ENSMAMG00000013272 ENSMAMG00000013237 Anabantoidei ANCESTRAL SPECIES 13 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Siamese fighting fish MODERN SPECIES 11 nepro (ENSBSLG00000021305) RALB (ENSBSLG00000021323) BZW1 (ENSBSLG00000022377) MYO1B (ENSBSLG00000022571) ENSBSLG00000023171 ENSBSLG00000023185 WNT6 (ENSBSLG00000023206) wnt10a (ENSBSLG00000023221) cdk5r2b (ENSBSLG00000023223) fev (ENSBSLG00000023227) cryba2b (ENSBSLG00000023236) umps (ENSBSLG00000023253) fn1a (ENSBSLG00000023376) ENSBSLG00000023457 ENSBSLG00000023482 #21 nrp2b (ENSBSLG00000023518) #22 epb41l5 (ENSBSLG00000023669) ptpn4a (ENSBSLG00000023717) tmem177 (ENSBSLG00000023772) MRAS (ENSBSLG00000023775) pth2ra (ENSBSLG00000023777) ENSBSLG00000023785 ENSBSLG00000023793 tmem163a (ENSBSLG00000023801) acmsd (ENSBSLG00000023809) ccnt2a (ENSBSLG00000023823) MAP3K19 (ENSBSLG00000023833) ramp1 (ENSBSLG00000023873) ube2f (ENSBSLG00000023893) zgc:162780 (ENSBSLG00000023956) zgc:162396 (ENSBSLG00000023967) Climbing perch MODERN SPECIES 12 ENSATEG00000026473 ENSATEG00000027644 ENSATEG00000012956 #21 ENSATEG00000012388 #22 epb41l5 (ENSATEG00000012315) ptpn4a (ENSATEG00000012178) tmem177 (ENSATEG00000012138) ENSATEG00000012132 ENSATEG00000012108 ENSATEG00000012066 ENSATEG00000025555 ENSATEG00000012016 tmem163a (ENSATEG00000029796) acmsd (ENSATEG00000011948) ccnt2a (ENSATEG00000011936) MAP3K19 (ENSATEG00000011930) ramp1 (ENSATEG00000011922) ENSATEG00000011881 ENSATEG00000011843 Carangaria ANCESTRAL SPECIES 12 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT01030000235506 ENSGT00940000164905.i.b.a.a ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Carangaria_A ANCESTRAL SPECIES 11 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT01030000235506 ENSGT00940000164905.i.b.a.a ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Seriola ANCESTRAL SPECIES 34 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.a.a ENSGT00940000164905.i.b.a.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Greater amberjack MODERN SPECIES 21 MYO1B (ENSSDUG00000011442) ENSSDUG00000011392 ENSSDUG00000011302 ENSSDUG00000011277 WNT6 (ENSSDUG00000011257) wnt10a (ENSSDUG00000011248) cdk5r2b (ENSSDUG00000011231) fev (ENSSDUG00000011221) cryba2b (ENSSDUG00000011208) umps (ENSSDUG00000011183) umps (ENSSDUG00000011174) umps (ENSSDUG00000011159) fn1a (ENSSDUG00000011068) ENSSDUG00000010992 ENSSDUG00000010939 #21 nrp2b (ENSSDUG00000010828) #22 epb41l5 (ENSSDUG00000010789) ptpn4a (ENSSDUG00000010750) tmem177 (ENSSDUG00000010744) ENSSDUG00000010701 MRAS (ENSSDUG00000010675) pth2ra (ENSSDUG00000010644) ENSSDUG00000010633 ENSSDUG00000010619 tmem163a (ENSSDUG00000010582) acmsd (ENSSDUG00000010546) ccnt2a (ENSSDUG00000010512) ENSSDUG00000010471 ramp1 (ENSSDUG00000010459) ube2f (ENSSDUG00000010350) zgc:162780 (ENSSDUG00000010324) Yellowtail amberjack MODERN SPECIES 3086 ENSSLDG00000022285 ENSSLDG00000022331 WNT6 (ENSSLDG00000022349) wnt10a (ENSSLDG00000022364) cdk5r2b (ENSSLDG00000022392) fev (ENSSLDG00000022400) cryba2b (ENSSLDG00000022419) umps (ENSSLDG00000022454) umps (ENSSLDG00000022559) fn1a (ENSSLDG00000022581) ENSSLDG00000022638 ENSSLDG00000022653 ENSSLDG00000022732 ENSSLDG00000022740 #21 ENSSLDG00000022746 #21 nrp2b (ENSSLDG00000022769) #22 Barramundi perch MODERN SPECIES 213 nrp2b (ENSLCAG00010028084) #22 epb41l5 (ENSLCAG00010028083) ptpn4a (ENSLCAG00010028082) tmem177 (ENSLCAG00010028081) MRAS (ENSLCAG00010028080) pth2ra (ENSLCAG00010028079) ENSLCAG00010028078 ENSLCAG00010028077 ENSLCAG00010028076 tmem163a (ENSLCAG00010028075) acmsd (ENSLCAG00010028074) ccnt2a (ENSLCAG00010028073) ENSLCAG00010028072 ramp1 (ENSLCAG00010028071) ube2f (ENSLCAG00010028070) zgc:162780 (ENSLCAG00010028069) Pleuronectoidei ANCESTRAL SPECIES 9 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.a.a ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a ENSGT00940000163794 Tongue sole MODERN SPECIES 7 ube2f (ENSCSEG00000019066) ENSCSEG00000019093 ENSCSEG00000019103 ENSCSEG00000019115 ENSCSEG00000019130 ADARB1 (ENSCSEG00000019137) agr1 (ENSCSEG00000019148) traf3ip1 (ENSCSEG00000019157) asb1 (ENSCSEG00000019185) fev (ENSCSEG00000019191) cryba2b (ENSCSEG00000019194) umps (ENSCSEG00000019200) fn1a (ENSCSEG00000019211) ENSCSEG00000019628 #21 ENSCSEG00000019637 nrp2b (ENSCSEG00000019639) #22 LRP1B (ENSCSEG00000019647) BZW1 (ENSCSEG00000019691) MYO1B (ENSCSEG00000019699) ENSCSEG00000019713 ENSCSEG00000019718 WNT6 (ENSCSEG00000019725) wnt10a (ENSCSEG00000019730) cdk5r2b (ENSCSEG00000019737) Turbot MODERN SPECIES 5 nepro (ENSSMAG00000006603) ENSSMAG00000006572 ENSSMAG00000005800 ENSSMAG00000005715 ENSSMAG00000005494 ENSSMAG00000005470 ENSSMAG00000005437 WNT6 (ENSSMAG00000005428) wnt10a (ENSSMAG00000005418) fev (ENSSMAG00000023246) cryba2b (ENSSMAG00000005379) umps (ENSSMAG00000005356) ENSSMAG00000026422 ENSSMAG00000005217 ENSSMAG00000005176 #21 ENSSMAG00000005109 #22 epb41l5 (ENSSMAG00000005045) ptpn4a (ENSSMAG00000004821) tmem177 (ENSSMAG00000023201) ENSSMAG00000028509 ENSSMAG00000004781 ENSSMAG00000032315 ENSSMAG00000004754 tmem163a (ENSSMAG00000004716) acmsd (ENSSMAG00000004685) ccnt2a (ENSSMAG00000004571) ENSSMAG00000004542 ramp1 (ENSSMAG00000033979) ube2f (ENSSMAG00000004518) ENSSMAG00000004498 zgc:162396 (ENSSMAG00000004484) Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000155270.i.a.c #22 Salmoninae ANCESTRAL SPECIES ENSGT00940000155270.i.a.c #22 Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155270.i.a.c.a #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000155270.i.a.c.a #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000155270.i.a.c.a #22 Coho salmon MODERN SPECIES 11 ENSOKIG00005001509 ENSOKIG00005001511 BMPR2 (ENSOKIG00005001539) ENSOKIG00005001665 ENSOKIG00005001666 #13 ENSOKIG00005001669 #13 RAPH1 (ENSOKIG00005001687) #14 CTLA4 (ENSOKIG00005001718) #19 ENSOKIG00005001725 ABCB6 (ENSOKIG00005001749) mnx2a (ENSOKIG00005001823) ENSOKIG00005001828 ENSOKIG00005001842 ENSOKIG00005001848 ENSOKIG00005001852 NRP2 (ENSOKIG00005002047) #22 igf2bp2a (ENSOKIG00005002427) ENSOKIG00005002524 ENSOKIG00005002535 NXPH2 (ENSOKIG00005002546) HYCC2 (ENSOKIG00005002556) xrcc5 (ENSOKIG00005002700) Chinook salmon MODERN SPECIES 1050 ENSOTSG00005041234 #22 Rainbow trout MODERN SPECIES 21 ENSOMYG00000062590 SUMO3 (ENSOMYG00000057887) ENSOMYG00000001527 ENSOMYG00000063418 ENSOMYG00000076555 ENSOMYG00000015001 abi2a (ENSOMYG00000071875) #13 ENSOMYG00000071606 #14 ENSOMYG00000001378 #19 ENSOMYG00000056154 ENSOMYG00000074984 ENSOMYG00000068449 ENSOMYG00000076231 ENSOMYG00000054031 ENSOMYG00000059150 ENSOMYG00000069527 #22 ENSOMYG00000051460 ENSOMYG00000059597 ENSOMYG00000064538 ENSOMYG00000001248 ENSOMYG00000061098 ENSOMYG00000052160 ENSOMYG00000065526 ENSOMYG00000061862 ENSOMYG00000074256 ENSOMYG00000039142 #21 ENSOMYG00000077773 ENSOMYG00000073984 ENSOMYG00000075835 ENSOMYG00000071479 ENSOMYG00000065519 Salmo ANCESTRAL SPECIES ENSGT00940000155270.i.a.c.a #22 Atlantic salmon MODERN SPECIES 85 ENSSSAG00000088953 #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155270.i.a.c.b #22 Salmo ANCESTRAL SPECIES ENSGT00940000155270.i.a.c.b #22 Atlantic salmon MODERN SPECIES 13 desma (ENSSSAG00000101128) ENSSSAG00000075388 ptprna (ENSSSAG00000075316) ENSSSAG00000093964 tba (ENSSSAG00000097028) ENSSSAG00000083223 ENSSSAG00000090127 ENSSSAG00000106032 ENSSSAG00000076280 ENSSSAG00000114599 ENSSSAG00000106497 ENSSSAG00000084947 ENSSSAG00000080855 ENSSSAG00000116935 ENSSSAG00000080865 ENSSSAG00000080872 #22 ENSSSAG00000089367 ENSSSAG00000009945 ENSSSAG00000105675 ENSSSAG00000114673 ENSSSAG00000092198 ENSSSAG00000080894 ENSSSAG00000080914 ENSSSAG00000091966 #19 ENSSSAG00000049766 #14 ENSSSAG00000096274 ENSSSAG00000088870 ENSSSAG00000050144 ENSSSAG00000050171 ENSSSAG00000050202 #10 ENSSSAG00000117001 River trout MODERN SPECIES 247 ENSSTUG00000045642 ENSSTUG00000045632 #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000155270.i.a.c.b #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000155270.i.a.c.b #22 Coho salmon MODERN SPECIES 18 ENSOKIG00005041786 desma (ENSOKIG00005037670) ptprna (ENSOKIG00005037777) ENSOKIG00005038243 tuba8l5 (ENSOKIG00005038266) ENSOKIG00005038307 TUBA4A (ENSOKIG00005038314) ENSOKIG00005038332 ENSOKIG00005038344 fn1a (ENSOKIG00005038414) ENSOKIG00005038799 ENSOKIG00005038816 ENSOKIG00005038825 ENSOKIG00005038858 ENSOKIG00005038873 NRP2 (ENSOKIG00005038900) #22 ENSOKIG00005039446 ENSOKIG00005039472 prkag3b (ENSOKIG00005039500) FER1L6 (ENSOKIG00005039679) ENSOKIG00005039897 #19 RAPH1 (ENSOKIG00005039928) #14 tmem237a (ENSOKIG00005040010) MPP4 (ENSOKIG00005040094) ALS2 (ENSOKIG00005040413) fzd7a (ENSOKIG00005041315) ENSOKIG00005041343 SUMO1 (ENSOKIG00005041379) ENSOKIG00005041403 #10 ENSOKIG00005041440 bmpr2b (ENSOKIG00005041479) Rainbow trout MODERN SPECIES 14 ENSOMYG00000036752 ENSOMYG00000072006 ENSOMYG00000036688 desma (ENSOMYG00000066819) ENSOMYG00000058527 ENSOMYG00000036743 ptprna (ENSOMYG00000036599) ENSOMYG00000069640 ENSOMYG00000058586 ihha (ENSOMYG00000036504) ENSOMYG00000036536 ENSOMYG00000036553 ENSOMYG00000071503 ENSOMYG00000060906 ENSOMYG00000074551 ENSOMYG00000063749 #22 ENSOMYG00000068788 ENSOMYG00000051588 ENSOMYG00000053842 ENSOMYG00000049740 ENSOMYG00000064801 ENSOMYG00000073741 cd28 (ENSOMYG00000037183) #19 ENSOMYG00000074658 #14 ENSOMYG00000054664 tmem237a (ENSOMYG00000057264) ENSOMYG00000037209 MPP4 (ENSOMYG00000037216) ENSOMYG00000048007 ENSOMYG00000049289 ALS2 (ENSOMYG00000070422) Huchen MODERN SPECIES 7836 ENSHHUG00000020391 #22 Northern pike MODERN SPECIES 19 ENSELUG00000034349 ENSELUG00000028156 ENSELUG00000029623 ENSELUG00000012109 ENSELUG00000028208 ENSELUG00000012093 ENSELUG00000025171 ENSELUG00000000437 ENSELUG00000031444 ENSELUG00000033051 ENSELUG00000012070 ENSELUG00000011821 ENSELUG00000000432 #21 ENSELUG00000028124 ENSELUG00000011702 nrp2b (ENSELUG00000011774) #22 ENSELUG00000029513 ENSELUG00000011632 ENSELUG00000011646 ENSELUG00000031723 ENSELUG00000011668 ENSELUG00000027299 ENSELUG00000001761 ENSELUG00000032766 ENSELUG00000026569 prkag3b (ENSELUG00000011611) ENSELUG00000011554 ABCB6 (ENSELUG00000000885) FER1L6 (ENSELUG00000011484) ENSELUG00000011439 #19 RAPH1 (ENSELUG00000011416) #14 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000155270.i.a.d #22 Salmoninae ANCESTRAL SPECIES ENSGT00940000155270.i.a.d #22 Huchen DUPLICATION Huchen MODERN SPECIES 3336 ENSHHUG00000017478 TRIM9 (ENSHHUG00000017413) ENSHHUG00000017407 #22 Huchen MODERN SPECIES 8977 ENSHHUG00000002574 #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155270.i.a.d #22 Salmo ANCESTRAL SPECIES ENSGT00940000155270.i.a.d #22 Atlantic salmon MODERN SPECIES 17 ENSSSAG00000039879 ENSSSAG00000100301 ENSSSAG00000040610 desma (ENSSSAG00000040563) ptprna (ENSSSAG00000075911) ENSSSAG00000040783 tuba8l5 (ENSSSAG00000040575) mnx2a (ENSSSAG00000083646) ENSSSAG00000087981 ENSSSAG00000040992 ENSSSAG00000121057 ENSSSAG00000041103 ENSSSAG00000103028 #21 ENSSSAG00000111983 ENSSSAG00000085403 ENSSSAG00000097568 #22 ENSSSAG00000110186 ENSSSAG00000101860 ENSSSAG00000113090 ENSSSAG00000097375 CTLA4 (ENSSSAG00000093109) #19 ENSSSAG00000099334 ENSSSAG00000041203 #14 abi2a (ENSSSAG00000117505) #13 ENSSSAG00000121545 #13 ENSSSAG00000120995 ENSSSAG00000101504 ENSSSAG00000113315 ENSSSAG00000107570 ENSSSAG00000084688 ENSSSAG00000086430 Otomorpha ANCESTRAL SPECIES 24 ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.a.a.b.p ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000166348 ENSGT00940000155126.s.b ENSGT00940000168433 ENSGT00940000161508.a ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156160.b.b ENSGT00530000068353 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #19 ENSGT00940000156552.c.a #14 ENSGT00940000156089.f #13 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.a.c ENSGT00940000158239.a.b ENSGT00390000013916 #10 ENSGT00950000183046.a.a.fb Clupeiformes ANCESTRAL SPECIES 164 ENSGT00940000164444.a ENSGT00950000182953.A ENSGT00950000182882.A.b.b.e ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b ENSGT00950000183165.a.a.b.p ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000166348 ENSGT00940000155126.s.b ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #19 ENSGT00940000174369 ENSGT00940000156552.c.a #14 ENSGT00940000156089.f #13 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.a.c ENSGT00390000013916 #10 ENSGT00950000183046.a.a.fb ENSGT00940000156449.a ENSGT00980000199010 Denticle herring DUPLICATION Denticle herring MODERN SPECIES 19 mettl8 (ENSDCDG00000004079) ENSDCDG00000004089 cybrd1 (ENSDCDG00000004092) ENSDCDG00000004100 BIN1 (ENSDCDG00000004121) TMEM198 (ENSDCDG00000004173) desma (ENSDCDG00000004177) ptprna (ENSDCDG00000004193) tuba8l3 (ENSDCDG00000004227) ENSDCDG00000004230 ENSDCDG00000004231 ENSDCDG00000004234 fn1a (ENSDCDG00000004283) CPO (ENSDCDG00000004945) ENSDCDG00000004946 #21 nrp2b (ENSDCDG00000004952) #22 nrp2b (ENSDCDG00000005067) #22 ENSDCDG00000003188 ENSDCDG00000003290 prkag3b (ENSDCDG00000003970) FER1L6 (ENSDCDG00000005115) ENSDCDG00000005183 #19 ENSDCDG00000005185 RAPH1 (ENSDCDG00000005222) #14 abi2a (ENSDCDG00000007413) #13 tmem237a (ENSDCDG00000007617) MPP4 (ENSDCDG00000007623) ALS2 (ENSDCDG00000007638) FZD7 (ENSDCDG00000007689) SUMO1 (ENSDCDG00000007696) ENSDCDG00000007700 #10 Denticle herring MODERN SPECIES 19 ENSDCDG00000004089 cybrd1 (ENSDCDG00000004092) ENSDCDG00000004100 BIN1 (ENSDCDG00000004121) TMEM198 (ENSDCDG00000004173) desma (ENSDCDG00000004177) ptprna (ENSDCDG00000004193) tuba8l3 (ENSDCDG00000004227) ENSDCDG00000004230 ENSDCDG00000004231 ENSDCDG00000004234 fn1a (ENSDCDG00000004283) CPO (ENSDCDG00000004945) ENSDCDG00000004946 #21 nrp2b (ENSDCDG00000004952) #22 nrp2b (ENSDCDG00000005067) #22 ENSDCDG00000003188 ENSDCDG00000003290 prkag3b (ENSDCDG00000003970) FER1L6 (ENSDCDG00000005115) ENSDCDG00000005183 #19 ENSDCDG00000005185 RAPH1 (ENSDCDG00000005222) #14 abi2a (ENSDCDG00000007413) #13 tmem237a (ENSDCDG00000007617) MPP4 (ENSDCDG00000007623) ALS2 (ENSDCDG00000007638) FZD7 (ENSDCDG00000007689) SUMO1 (ENSDCDG00000007696) ENSDCDG00000007700 #10 fam117bb (ENSDCDG00000007713) Atlantic herring MODERN SPECIES 11 ENSCHAG00000021194 ENSCHAG00000021138 ENSCHAG00000021128 CPO (ENSCHAG00000021114) ENSCHAG00000021106 fn1a (ENSCHAG00000006827) ENSCHAG00000006315 ENSCHAG00000006272 ENSCHAG00000006261 ENSCHAG00000006221 ENSCHAG00000006203 ENSCHAG00000006167 ENSCHAG00000006074 CPO (ENSCHAG00000006055) ENSCHAG00000006013 nrp2b (ENSCHAG00000005795) #22 ENSCHAG00000005719 prkag3b (ENSCHAG00000005568) ENSCHAG00000005546 ENSCHAG00000003986 ENSCHAG00000003893 RAPH1 (ENSCHAG00000002673) #14 ENSCHAG00000002493 abi2a (ENSCHAG00000001148) #13 ENSCHAG00000010577 fam117bb (ENSCHAG00000010558) ENSCHAG00000010470 ENSCHAG00000010442 ENSCHAG00000009034 ENSCHAG00000008986 #10 ENSCHAG00000008952 Otophysi ANCESTRAL SPECIES 203 ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.a.a.b.p ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000166348 ENSGT00940000155126.s.b ENSGT00940000161508.a ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156160.b.b ENSGT00530000068353 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #19 ENSGT00940000156552.c.a #14 ENSGT00940000156089.f #13 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.b ENSGT00390000013916 #10 ENSGT00950000183046.a.a.fb ENSGT00940000156449.a Cyprinoidei ANCESTRAL SPECIES 59 ENSGT00940000164444.a ENSGT00950000182953.A ENSGT00950000182882.A.b.b.e ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b.p.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.b.a.e.b.d.a.b.p.a ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000166348 ENSGT00940000155126.s.b ENSGT00950000183214.a.b.a.b.f.a.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156160.b.b ENSGT00530000068353 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #19 ENSGT00940000156552.c.a #14 ENSGT00940000156089.f #13 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.b ENSGT00390000013916.g.b #10 ENSGT00950000183046.a.a.fb ENSGT00940000156449.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 1357 ENSGT00950000183214.a.b.a.b.f.a.a.b #21 ENSGT00940000155270.i.a.g #22 Cyprininae_a ANCESTRAL SPECIES 210 ENSGT00950000183214.a.b.a.b.f.a.a.b #21 ENSGT00940000155270.i.a.g #22 ENSGT00940000157916.e ENSGT00950000183019.f.b.b.c.g ENSGT00940000159069.h ENSGT00940000174369 ENSGT00940000156552.c.a.b #14 ENSGT00940000156089.f.a #13 ENSGT00940000156444.d.d ENSGT00940000155861.C.f.g ENSGT00860000133854 ENSGT00950000183046.a.a.fb.c.b ENSGT00940000156449.a.b ENSGT00940000161051.a.a.a.a.a.b ENSGT00940000154856.A.a.d.a ENSGT00940000181146.a ENSGT00390000005911.n Common carp reference MODERN SPECIES 41 inpp4aa (ENSCCRG00000052641) si:dkey-4e7.3 (ENSCCRG00000044028) ENSCCRG00000044039 ENSCCRG00000038329 ihha (ENSCCRG00000021319) ENSCCRG00000011773 ENSCCRG00000053719 desma (ENSCCRG00000034567) ptprna (ENSCCRG00000034582) dnajb2 (ENSCCRG00000064837) ENSCCRG00000076394 #21 tuba8l3 (ENSCCRG00000034603) ENSCCRG00000000795 ENSCCRG00000072723 ENSCCRG00000000774 ENSCCRG00000011725 #22 ENSCCRG00000066621 ENSCCRG00000037457 prkag3b (ENSCCRG00000059317) ENSCCRG00000005693 ENSCCRG00000072640 ENSCCRG00000004178 #14 abi2a (ENSCCRG00000003969) #13 ENSCCRG00000004189 ENSCCRG00000029304 ENSCCRG00000073703 fam117bb (ENSCCRG00000078665) bmpr2b (ENSCCRG00000017905) ENSCCRG00000073722 ENSCCRG00000006872 ENSCCRG00000006883 Golden-line barbel MODERN SPECIES 161 ENSSGRG00000035513 #21 nrp2b (ENSSGRG00000035511) #22 ENSSGRG00000035439 prkag3b (ENSSGRG00000035315) ENSSGRG00000035280 ENSSGRG00000035275 RAPH1 (ENSSGRG00000035192) #14 abi2a (ENSSGRG00000034353) #13 MPP4 (ENSSGRG00000034221) ALS2 (ENSSGRG00000034030) bmpr2b (ENSSGRG00000033981) ENSSGRG00000033621 ENSSGRG00000033455 ENSSGRG00000033449 ENSSGRG00000033447 glb1l (ENSSGRG00000033446) ENSSGRG00000033344 Goldfish MODERN SPECIES 1030 ENSCARG00000055582 nrp2b (ENSCARG00000055598) #22 Cyprininae ANCESTRAL SPECIES 122 ENSGT00940000164444.a.j ENSGT00950000182953.A ENSGT00950000182882.A.b.b.e.b ENSGT00390000016940.c.b.a.a ENSGT00940000155522.g.a.b ENSGT00940000154095.b.b.a.b.a ENSGT00940000167284.p.b.a ENSGT00950000183165.b.a.e.b.d.a.b.p.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.b.a.e.b.d.a.b.o ENSGT00940000160059.a.b.b.d ENSGT00430000031142 ENSGT00940000166348.b ENSGT00940000155126.s.b.a.b ENSGT00950000183214.a.b.a.b.f.a.a.a.a #21 ENSGT00940000155270.i.a.h #22 ENSGT00940000156160.b.b ENSGT00940000157916.f ENSGT00950000183019.f.b.b.c.f.a ENSGT00940000159069.g.b ENSGT00530000063873.B #19 ENSGT00940000156552.c.a.a #14 ENSGT00940000156089.f.b #13 ENSGT00390000005159.i ENSGT00940000156444.d.c ENSGT00940000155861.C.f.h ENSGT00940000158239.a.b ENSGT00390000013916.g.b #10 ENSGT00950000183046.a.a.fb.c.a ENSGT00940000156449.a.a ENSGT00940000164964.b Cyprininae_a ANCESTRAL SPECIES 95 ENSGT00940000164444.a.j ENSGT00950000182953.A ENSGT00950000182882.A.b.b.e.b ENSGT00390000016940.c.b.a.a ENSGT00940000155522.g.a.b ENSGT00940000154095.b.b.a.b.a ENSGT00940000167284.p.b.a ENSGT00950000183165.b.a.e.b.d.a.b.p.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.b.a.e.b.d.a.b.o ENSGT00940000160059.a.b.b.d ENSGT00430000031142 ENSGT00940000166348.b ENSGT00940000155126.s.b.a.b ENSGT00950000183214.a.b.a.b.f.a.a.a.a #21 ENSGT00940000155270.i.a.h #22 ENSGT00940000156160.b.b ENSGT00940000157916.f ENSGT00950000183019.f.b.b.c.f.a ENSGT00940000159069.g.b ENSGT00530000063873.B #19 ENSGT00940000156552.c.a.a #14 ENSGT00940000156089.f.b #13 ENSGT00390000005159.i ENSGT00940000156444.d.c ENSGT00940000155861.C.f.h ENSGT00940000158239.a.b ENSGT00390000013916.g.b #10 ENSGT00950000183046.a.a.fb.c.a ENSGT00940000156449.a.a ENSGT00940000164964.b Common carp reference MODERN SPECIES 46 mitd1 (ENSCCRG00000004687) ihha (ENSCCRG00000054515) ENSCCRG00000021320 ENSCCRG00000021338 ENSCCRG00000080691 ptprna (ENSCCRG00000071126) desma (ENSCCRG00000011771) dnajb2 (ENSCCRG00000071393) tuba8l3 (ENSCCRG00000010063) tuba8l5 (ENSCCRG00000060295) mnx2a (ENSCCRG00000073003) ENSCCRG00000068659 ENSCCRG00000064495 fn1a (ENSCCRG00000000854) ENSCCRG00000060738 #21 nrp2b (ENSCCRG00000077747) #22 ENSCCRG00000077003 ENSCCRG00000027136 prkag3b (ENSCCRG00000062058) ENSCCRG00000004252 ENSCCRG00000069803 #14 abi2a (ENSCCRG00000066983) #13 tmem237a (ENSCCRG00000003941) MPP4 (ENSCCRG00000003914) ALS2 (ENSCCRG00000044930) fzd7a (ENSCCRG00000031157) ENSCCRG00000031158 #10 ENSCCRG00000077193 #10 fam117bb (ENSCCRG00000057946) bmpr2b (ENSCCRG00000046124) ENSCCRG00000008194 Golden-line barbel MODERN SPECIES 219 ENSSGRG00000000125 #21 nrp2b (ENSSGRG00000054601) #22 ABCB6 (ENSSGRG00000054575) ENSSGRG00000054496 #19 RAPH1 (ENSSGRG00000054491) #14 abi2a (ENSSGRG00000054354) #13 tmem237a (ENSSGRG00000054344) ENSSGRG00000054343 ALS2 (ENSSGRG00000054333) fzd7a (ENSSGRG00000054326) CARF (ENSSGRG00000054325) #10 fam117bb (ENSSGRG00000054324) bmpr2b (ENSSGRG00000054319) ENSSGRG00000054316 ENSSGRG00000054302 ENSSGRG00000054279 ENSSGRG00000054273 Goldfish MODERN SPECIES 49 ENSCARG00000067349 mitd1 (ENSCARG00000067315) ihha (ENSCARG00000067304) ENSCARG00000067283 BIN1 (ENSCARG00000067097) TMEM198 (ENSCARG00000067059) desma (ENSCARG00000066972) ptprna (ENSCARG00000066530) dnajb2 (ENSCARG00000066492) tuba8l3 (ENSCARG00000066483) mnx2a (ENSCARG00000066460) ENSCARG00000066428 fn1a (ENSCARG00000064711) ENSCARG00000064592 #21 ENSCARG00000064580 nrp2b (ENSCARG00000063747) #22 ABCB6 (ENSCARG00000061474) ENSCARG00000061091 prkag3b (ENSCARG00000060959) ENSCARG00000059288 ENSCARG00000059106 #19 RAPH1 (ENSCARG00000059025) #14 abi2a (ENSCARG00000058606) #13 tmem237a (ENSCARG00000058541) MPP4 (ENSCARG00000058403) ALS2 (ENSCARG00000058302) fzd7a (ENSCARG00000058275) CARF (ENSCARG00000058221) #10 fam117bb (ENSCARG00000058201) bmpr2b (ENSCARG00000058042) ENSCARG00000057993 Zebrafish MODERN SPECIES 24 scel (ENSDARG00000034677) mycbp2 (ENSDARG00000001220) fbxl3a (ENSDARG00000103505) CLN5 (ENSDARG00000076339) RSPH1 (ENSDARG00000102261) EPHA3 (ENSDARG00000039373) C9H3orf38 (ENSDARG00000076798) MYO1B (ENSDARG00000024694) upp2 (ENSDARG00000036833) crfb4 (ENSDARG00000068711) ENSDARG00000068713 znfl1b (ENSDARG00000075996) ENSDARG00000095057 fn1a (ENSDARG00000019815) ENSDARG00000034555 #21 nrp2b (ENSDARG00000038446) #22 ENSDARG00000113678 ABCB6 (ENSDARG00000074254) ENSDARG00000095580 ENSDARG00000078935 prkag3b (ENSDARG00000000369) FER1L6 (ENSDARG00000019316) ENSDARG00000086317 ENSDARG00000078193 ENSDARG00000069978 ENSDARG00000095070 #19 RAPH1 (ENSDARG00000006301) #14 abi2a (ENSDARG00000058207) #13 tmem237a (ENSDARG00000041735) MPP4 (ENSDARG00000058222) ALS2 (ENSDARG00000075111) Characiphysae ANCESTRAL SPECIES 3 ENSGT00950000182882.A.b.b.e ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.a.a.b.p ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000166348 ENSGT00940000155126.s.b ENSGT00940000161508.a ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156160.b.b ENSGT00530000068353 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #19 ENSGT00940000156552.c.a #14 ENSGT00940000156089.f #13 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.a.c ENSGT00940000158239.a.b ENSGT00390000013916 #10 ENSGT00950000183046.a.a.fb Channel catfish MODERN SPECIES 25 klhl23 (ENSIPUG00000010368) mettl5 (ENSIPUG00000010384) ihh (ENSIPUG00000010425) ENSIPUG00000010446 bin1 (ENSIPUG00000010467) TMEM198 (ENSIPUG00000010543) DES (ENSIPUG00000010573) ptprn (ENSIPUG00000010648) dnajb2 (ENSIPUG00000010686) tuba8l3 (ENSIPUG00000010729) mnx2a (ENSIPUG00000010749) cfap65 (ENSIPUG00000010768) ENSIPUG00000010818 fn1a (ENSIPUG00000010834) ENSIPUG00000010916 #21 nrp2b (ENSIPUG00000011051) #22 ENSIPUG00000011119 ENSIPUG00000011147 ttll4 (ENSIPUG00000011178) prkag3b (ENSIPUG00000011296) FER1L6 (ENSIPUG00000011610) ENSIPUG00000011861 #19 raph1 (ENSIPUG00000011891) #14 abi2a (ENSIPUG00000012006) #13 tmem237a (ENSIPUG00000012105) ALS2 (ENSIPUG00000012149) fzd7a (ENSIPUG00000012373) fam117b (ENSIPUG00000012389) Bmpr2 (ENSIPUG00000012409) gpr39 (ENSIPUG00000012486) slc35f5 (ENSIPUG00000012504) Characiphysae_b ANCESTRAL SPECIES 11 ENSGT00950000182882.A.b.b.e ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.a.a.b.p ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000166348 ENSGT00940000155126.s.b ENSGT00940000161508.a ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156160.b.b ENSGT00530000068353 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #19 ENSGT00940000156552.c.a #14 ENSGT00940000156089.f #13 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.a.c ENSGT00940000158239.a.b ENSGT00390000013916 #10 ENSGT00950000183046.a.a.fb Characoidei ANCESTRAL SPECIES 1 ENSGT00950000182953.A ENSGT00950000182882.A.b.b.e ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b ENSGT00950000183165.a.a.b.p ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000166348 ENSGT00940000155126.s.b ENSGT00940000161508.a ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.a #21 ENSGT00940000155270.i.a #22 ENSGT00940000156160.b.b ENSGT00530000068353 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #19 ENSGT00940000156552.c.a #14 ENSGT00940000156089.f #13 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.a.c ENSGT00390000013916 #10 ENSGT00950000183046.a.a.fb ENSGT00940000156449.a Mexicana tetra MODERN SPECIES 10 ENSAMXG00000005775 ENSAMXG00000034461 TMEM198 (ENSAMXG00000037083) desma (ENSAMXG00000005727) ptprna (ENSAMXG00000005704) dnajb2 (ENSAMXG00000011374) tuba8l3 (ENSAMXG00000030284) tuba8l5 (ENSAMXG00000031158) ENSAMXG00000041817 mnx2a (ENSAMXG00000005665) ENSAMXG00000031720 ENSAMXG00000039421 fn1a (ENSAMXG00000005593) CPO (ENSAMXG00000005569) ENSAMXG00000005554 #21 nrp2b (ENSAMXG00000029255) #22 ABCB6 (ENSAMXG00000016860) ENSAMXG00000016833 ENSAMXG00000016816 prkag3b (ENSAMXG00000016794) FER1L6 (ENSAMXG00000016740) ENSAMXG00000043077 #19 RAPH1 (ENSAMXG00000016673) #14 abi2a (ENSAMXG00000041989) #13 tmem237a (ENSAMXG00000002221) MPP4 (ENSAMXG00000002002) ENSAMXG00000001777 ALS2 (ENSAMXG00000001685) FZD7 (ENSAMXG00000024305) ENSAMXG00000043514 CARF (ENSAMXG00000024302) #10 Red-bellied piranha MODERN SPECIES 19 BIN1 (ENSPNAG00000012203) TMEM198 (ENSPNAG00000002102) desma (ENSPNAG00000002091) ptprna (ENSPNAG00000002070) dnajb2 (ENSPNAG00000011988) tuba8l3 (ENSPNAG00000002009) TUBA4A (ENSPNAG00000011606) mnx2a (ENSPNAG00000011602) ENSPNAG00000001814 ENSPNAG00000011567 fn1a (ENSPNAG00000001773) ENSPNAG00000001704 ENSPNAG00000011342 PARD3B (ENSPNAG00000011335) #21 ENSPNAG00000011310 nrp2b (ENSPNAG00000001661) #22 ABCB6 (ENSPNAG00000011251) ENSPNAG00000011221 prkag3b (ENSPNAG00000001576) FER1L6 (ENSPNAG00000001564) ENSPNAG00000001516 #19 RAPH1 (ENSPNAG00000011070) #14 ENSPNAG00000010959 abi2a (ENSPNAG00000010929) #13 tmem237a (ENSPNAG00000010819) MPP4 (ENSPNAG00000010716) ALS2 (ENSPNAG00000010684) Electric eel MODERN SPECIES 553 C1QL2 (ENSEEEG00000002884) ENSEEEG00000002897 ENSEEEG00000002899 STEAP3 (ENSEEEG00000002901) ENSEEEG00000002904 ENSEEEG00000002907 #21 ENSEEEG00000002910 nrp2b (ENSEEEG00000002912) #22 Clupeocephala ANCESTRAL SPECIES 323 ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00530000063873.A #17 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118 ENSGT00940000159160 ENSGT00730000111163 Otomorpha ANCESTRAL SPECIES 356 ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00390000016929 ENSGT00940000155466.e.a ENSGT00940000155235.k.b ENSGT00940000165586.b ENSGT00940000154349 ENSGT00940000159224.b ENSGT00940000154695.d.b.b ENSGT00530000063186.b.b ENSGT01030000234570.d.a.p Clupeiformes ANCESTRAL SPECIES 150 ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT01030000234570.d.a.p ENSGT00530000063186.b.b ENSGT00940000154695.d.b.b ENSGT00940000159224.b ENSGT00940000154349 ENSGT00940000165586.b ENSGT00940000155235.k.b ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234607.A.b ENSGT00530000063410.b ENSGT00940000164110 ENSGT00950000183019.f.b.b.d Atlantic herring MODERN SPECIES 13 grk5 (ENSCHAG00000016016) ash2l (ENSCHAG00000016087) pnx (ENSCHAG00000016403) ENSCHAG00000016447 ykt6 (ENSCHAG00000016618) ddx56 (ENSCHAG00000016819) ENSCHAG00000017319 ERAP1 (ENSCHAG00000017379) ANKRD34B (ENSCHAG00000019227) ENSCHAG00000019233 RASGRF2 (ENSCHAG00000019251) ckmt2a (ENSCHAG00000019423) pi4kaa (ENSCHAG00000019448) ENSCHAG00000019534 ENSCHAG00000019553 #21 nrp2a (ENSCHAG00000019570) #22 ENSCHAG00000019707 ENSCHAG00000019715 ENSCHAG00000019728 ENSCHAG00000019732 abcb6a (ENSCHAG00000019814) ENSCHAG00000020975 ENSCHAG00000020996 ENSCHAG00000021014 ENSCHAG00000021028 ENSCHAG00000021035 slx9 (ENSCHAG00000021057) ADARB1 (ENSCHAG00000021085) cep70 (ENSCHAG00000021175) septin10 (ENSCHAG00000021327) sowahcb (ENSCHAG00000022662) Denticle herring MODERN SPECIES 304 ERBB4 (ENSDCDG00000029753) lancl1 (ENSDCDG00000031483) mylz3 (ENSDCDG00000031492) cnppd1 (ENSDCDG00000031500) nrp2a (ENSDCDG00000031502) #22 abcb6a (ENSDCDG00000031510) cnppd1 (ENSDCDG00000031513) mylz3 (ENSDCDG00000031516) lancl1 (ENSDCDG00000031538) ENSDCDG00000031564 Otophysi ANCESTRAL SPECIES 282 ENSGT01030000234570.d.a.p ENSGT00530000063186.b.b ENSGT00940000154695.d.b.a.a ENSGT00940000154349 ENSGT00940000165586.b ENSGT00940000155235.k.b ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234607.A.b ENSGT00530000063410.b ENSGT00940000164110 ENSGT00950000183019.f.b.b.d ENSGT00390000000862 ENSGT00940000156160.b.a ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 Characiphysae ANCESTRAL SPECIES 81 ENSGT00390000004681.b.d ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234607.A.b ENSGT00530000063410.b ENSGT00940000164110 ENSGT00950000183019.f.b.b.d ENSGT00390000000862 ENSGT00940000156160.b.a ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000159293 ENSGT00940000157972.d ENSGT00940000160560.a.b.b ENSGT00940000158025.a.b.b ENSGT00940000157932.m.b ENSGT00940000156254.o.a ENSGT00940000159416 ENSGT00940000156666 ENSGT00950000182935.B.b.d.b ENSGT00940000167865 ENSGT00930000151032.A.e ENSGT00390000009298 ENSGT00390000013127.b ENSGT00390000010052.b ENSGT00400000022459 Channel catfish MODERN SPECIES 18 ENSIPUG00000006725 ENSIPUG00000006640 ENSIPUG00000006613 ENSIPUG00000006598 GFUS (ENSIPUG00000006534) ENSIPUG00000006466 ENSIPUG00000006448 gtf3c3 (ENSIPUG00000006418) fastkd2 (ENSIPUG00000006397) mdh1b (ENSIPUG00000006368) retreg2 (ENSIPUG00000006338) ENSIPUG00000006236 cnppd1 (ENSIPUG00000006225) abcb6a (ENSIPUG00000006061) pard3b (ENSIPUG00000005899) #21 nrp2 (ENSIPUG00000005833) #22 ENSIPUG00000005817 radil (ENSIPUG00000005732) Mmd2 (ENSIPUG00000005684) ENSIPUG00000005641 ENSIPUG00000005624 ENSIPUG00000005572 ENSIPUG00000005560 ENSIPUG00000005550 ENSIPUG00000005531 ENSIPUG00000005516 ENSIPUG00000005490 FAM83G (ENSIPUG00000005458) slc5a10 (ENSIPUG00000005402) grapb (ENSIPUG00000005341) ENSIPUG00000005328 Characiphysae_b ANCESTRAL SPECIES 232 ENSGT01030000234607.A.b ENSGT00530000063410.b ENSGT00940000164110 ENSGT00950000183019.f.b.b.d ENSGT00390000000862 ENSGT00940000156160.b.a ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000159293 ENSGT00940000157972.d ENSGT00940000160560.a.b.b Characoidei ANCESTRAL SPECIES 87 ENSGT00390000016929 ENSGT00940000155466.e.a ENSGT01030000234607.A.b ENSGT00530000063410.b ENSGT00940000164110 ENSGT00950000183019.f.b.b.d ENSGT00390000000862 ENSGT00940000156160.b.a ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000160811.c.a ENSGT00940000159293 ENSGT00940000157972.d ENSGT00940000160560.a.b.b ENSGT00940000160560.a.a.a.b.a.a ENSGT00940000158025.a.b.a ENSGT00940000159416 ENSGT00940000157932.m.b ENSGT00940000156254.o.a ENSGT00940000156666 ENSGT00950000182935.B.b.d.b ENSGT00930000151032.A.e ENSGT00390000009298 ENSGT00390000013127.b ENSGT00390000010052.b Red-bellied piranha MODERN SPECIES 225 GFUS (ENSPNAG00000010020) ENSPNAG00000009986 ENSPNAG00000009966 ENSPNAG00000009957 ENSPNAG00000009919 gtf3c3 (ENSPNAG00000009885) ENSPNAG00000009811 HECW2 (ENSPNAG00000009803) ENSPNAG00000009780 mdh1b (ENSPNAG00000009734) retreg2 (ENSPNAG00000009693) ENSPNAG00000009657 cnppd1 (ENSPNAG00000009634) abcb6a (ENSPNAG00000009624) pard3ba (ENSPNAG00000009568) #21 nrp2a (ENSPNAG00000009508) #22 EN1 (ENSPNAG00000009401) radil (ENSPNAG00000009385) MMD2 (ENSPNAG00000009305) ENSPNAG00000009266 ENSPNAG00000009236 Mexicana tetra MODERN SPECIES 3 RASA3 (ENSAMXG00000034928) GFUS (ENSAMXG00000042658) GFUS (ENSAMXG00000032502) gtf3c3 (ENSAMXG00000009403) HECW2 (ENSAMXG00000009379) ENSAMXG00000009357 ENSAMXG00000015074 mdh1b (ENSAMXG00000015106) retreg2 (ENSAMXG00000015131) ENSAMXG00000015163 cnppd1 (ENSAMXG00000032610) ccdc65 (ENSAMXG00000015221) abcb6a (ENSAMXG00000015242) ENSAMXG00000035264 pard3ba (ENSAMXG00000015269) #21 nrp2a (ENSAMXG00000041234) #22 EN1 (ENSAMXG00000032786) radil (ENSAMXG00000016056) MMD2 (ENSAMXG00000016038) ENSAMXG00000034289 ENSAMXG00000013955 ENSAMXG00000037431 ENSAMXG00000042087 ENSAMXG00000042986 ENSAMXG00000036365 syngr3b (ENSAMXG00000043863) ENSAMXG00000038954 ENSAMXG00000040802 ENSAMXG00000039436 alkbh5 (ENSAMXG00000037092) mief2 (ENSAMXG00000004319) Electric eel MODERN SPECIES 638 nrp2a (ENSEEEG00000018654) #22 en1b (ENSEEEG00000018653) ENSEEEG00000018652 radil (ENSEEEG00000018650) MMD2 (ENSEEEG00000018648) ENSEEEG00000018646 ENSEEEG00000018645 Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES 34 ENSGT00530000063186.b.b ENSGT00940000154695.d.b.b.k.b ENSGT00940000154695.d.b.b.l ENSGT00940000154349 ENSGT00940000165586.b ENSGT00940000155235.k.b ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234607.A.b ENSGT00530000063410.b ENSGT00940000164110 ENSGT00950000183019.f.b.b.d ENSGT00390000000862 ENSGT00940000156160.b.a ENSGT00950000183214.a.b.a.b.f.b.a.a #21 ENSGT00940000155270.i.b.a #22 ENSGT00940000161508.b ENSGT00940000155126.s.a ENSGT00390000004553 ENSGT00940000160059.a.b.a ENSGT00550000075037 ENSGT00950000183165.a.a.b.o.b ENSGT00390000012721.b ENSGT00950000183055.a.a ENSGT00940000159810 ENSGT00940000160718 ENSGT00940000158453.a ENSGT01050000244955.a.a ENSGT01050000244897.a.b.b.a.b ENSGT00390000010543 ENSGT00940000155318.b.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 119 ENSGT00940000155270.i.b.a.a #22 ENSGT00940000161508.b.f ENSGT00940000155126.s.a.a ENSGT00390000004553.h ENSGT00940000160059.a.b.a.b ENSGT00550000075037.d ENSGT00950000183165.a.a.b.o.a ENSGT00390000012721.b.r ENSGT00950000183055.a.a.f ENSGT00940000159810.d ENSGT00940000160718.d ENSGT00940000158453.a.f ENSGT01050000244955.a.a.j ENSGT01050000244897.a.b.b.a.b.b ENSGT00390000010543.l ENSGT00940000155318.b.b.b Goldfish MODERN SPECIES ndufab1a (ENSCARG00000028263) plk1 (ENSCARG00000028289) ENSCARG00000028368 chtf18 (ENSCARG00000028754) gng13a (ENSCARG00000028819) zgc:136472 (ENSCARG00000028831) ubn1 (ENSCARG00000028869) uncx4.1 (ENSCARG00000028879) micall2b (ENSCARG00000028910) ENSCARG00000029016 ENSCARG00000029831 ELFN1 (ENSCARG00000029841) ENSCARG00000029848 ENSCARG00000029859 ENSCARG00000029863 #21 nrp2a (ENSCARG00000029896) #22 cpo (ENSCARG00000030462) fn1b (ENSCARG00000031169) ENSCARG00000059532 mnx2b (ENSCARG00000059558) stk16 (ENSCARG00000059585) ENSCARG00000059596 ndfip2 (ENSCARG00000059625) ENSCARG00000059641 ENSCARG00000059651 spry2 (ENSCARG00000059657) ENSCARG00000059669 ENSCARG00000059678 ENSCARG00000059691 ENSCARG00000059721 DONSON (ENSCARG00000059762) Cyprininae_a ANCESTRAL SPECIES 125 ENSGT00940000154695.d.b.b.l.b ENSGT00940000154349.a ENSGT00940000155235.k.b.b ENSGT00940000155466.e.a.v ENSGT01030000234607.A.b.b ENSGT00530000063410.b.h ENSGT00940000164110.d ENSGT00950000183019.f.b.b.d.b ENSGT00390000000862.d ENSGT00940000156160.b.a.h ENSGT00950000183214.a.b.a.b.f.b.a.b #21 ENSGT00940000155270.i.b.a.a #22 ENSGT00940000161508.b.f ENSGT00940000155126.s.a.a ENSGT00390000004553.h ENSGT00940000160059.a.b.a.b ENSGT00550000075037.d ENSGT00950000183165.a.a.b.o.a ENSGT00390000012721.b.r ENSGT00950000183055.a.a.f ENSGT00940000159810.d ENSGT00940000160718.d ENSGT00940000158453.a.f ENSGT01050000244955.a.a.j ENSGT01050000244897.a.b.b.a.b.b ENSGT00390000010543.l ENSGT00940000155318.b.b.b Common carp reference MODERN SPECIES 22 mylz3 (ENSCCRG00000029856) lancl1 (ENSCCRG00000061307) ERBB4 (ENSCCRG00000062241) ENSCCRG00000074113 ENSCCRG00000078711 erbb4a (ENSCCRG00000025215) ube2f (ENSCCRG00000054390) klf7a (ENSCCRG00000060049) ENSCCRG00000030814 ENSCCRG00000003929 retreg2 (ENSCCRG00000032443) ENSCCRG00000023072 cnppd1 (ENSCCRG00000079841) abcb6a (ENSCCRG00000078899) ENSCCRG00000024157 #21 nrp2a (ENSCCRG00000005417) #22 cpo (ENSCCRG00000067406) fn1b (ENSCCRG00000003115) atic (ENSCCRG00000007553) mnx2b (ENSCCRG00000078365) stk16 (ENSCCRG00000013994) ENSCCRG00000014401 ndfip2 (ENSCCRG00000013997) spry2 (ENSCCRG00000067691) ENSCCRG00000059962 ENSCCRG00000058343 ENSCCRG00000077467 SLITRK1 (ENSCCRG00000081534) slitrk6 (ENSCCRG00000072693) SLITRK5 (ENSCCRG00000069880) ENSCCRG00000080173 Golden-line barbel MODERN SPECIES 371 ENSSGRG00000015089 ENSSGRG00000015080 mdh1b (ENSSGRG00000015076) retreg2 (ENSSGRG00000015075) ENSSGRG00000015048 cnppd1 (ENSSGRG00000015017) abcb6a (ENSSGRG00000014835) ENSSGRG00000014813 ENSSGRG00000014812 ENSSGRG00000014810 #21 ENSSGRG00000014809 #22 ENSSGRG00000014808 #22 nrp2a (ENSSGRG00000014790) #22 cpo (ENSSGRG00000014789) fn1b (ENSSGRG00000006839) atic (ENSSGRG00000002514) ENSSGRG00000002437 stk16 (ENSSGRG00000002423) ENSSGRG00000002311 ndfip2 (ENSSGRG00000002306) spry2 (ENSSGRG00000002305) Cyprininae ANCESTRAL SPECIES 117 ENSGT00530000063186.b.b.k ENSGT00940000154695.d.b.b.k.a.a.b ENSGT00940000154695.d.b.b.l.a ENSGT00940000154349.b ENSGT00940000165586.b ENSGT00940000155235.k.b.a ENSGT00940000155466.e.a.u ENSGT00390000016929 ENSGT01030000234607.A.b.a ENSGT00530000063410.b ENSGT00940000164110.c ENSGT00950000183019.f.b.b.d.a ENSGT00390000000862.c ENSGT00940000156160.b.a.g ENSGT00950000183214.a.b.a.b.f.b.a.a #21 ENSGT00940000155270.i.b.a.b #22 ENSGT00940000161508.b.e ENSGT00940000155126.s.a.b ENSGT00390000004553.g ENSGT00940000160059.a.b.a.a ENSGT00550000075037.c ENSGT00950000183165.a.a.b.o.b ENSGT00390000012721.b.q ENSGT00950000183055.a.a.e ENSGT00940000159810.c.b ENSGT00940000160718.c ENSGT00940000158453.a.e ENSGT01050000244955.a.a.i ENSGT01050000244897.a.b.b.a.b.a Goldfish MODERN SPECIES 18 ENSCARG00000069816 ENSCARG00000069811 ENSCARG00000069809 GGACT (ENSCARG00000069805) FARP1 (ENSCARG00000069717) kpnb3 (ENSCARG00000069653) ENSCARG00000069643 rap2ab (ENSCARG00000069641) mbnl2 (ENSCARG00000069639) OXGR1 (ENSCARG00000069636) OXGR1 (ENSCARG00000069635) slc5a3a (ENSCARG00000069632) ENSCARG00000069631 ENSCARG00000069630 ENSCARG00000069628 nrp2a (ENSCARG00000069620) #22 ENSCARG00000069616 cpo (ENSCARG00000069612) cpo (ENSCARG00000069605) fn1b (ENSCARG00000059810) atic (ENSCARG00000057514) mnx2b (ENSCARG00000057417) stk16 (ENSCARG00000057390) tuba8l2 (ENSCARG00000057375) ndfip2 (ENSCARG00000057274) spry2 (ENSCARG00000057245) ERBB4 (ENSCARG00000048984) lancl1 (ENSCARG00000048480) mylz3 (ENSCARG00000048296) ENSCARG00000048273 mxa (ENSCARG00000046959) Cyprininae_a ANCESTRAL SPECIES 158 ENSGT00530000063186.b.b.k ENSGT00940000154695.d.b.b.k.a.a.b ENSGT00940000154695.d.b.b.l.a ENSGT00940000154349.b ENSGT00940000165586.b ENSGT00940000155235.k.b.a ENSGT00940000155466.e.a.u ENSGT00390000016929 ENSGT01030000234607.A.b.a ENSGT00530000063410.b.g ENSGT00940000164110.c ENSGT00950000183019.f.b.b.d.a ENSGT00390000000862.c ENSGT00940000156160.b.a.g ENSGT00950000183214.a.b.a.b.f.b.a.a #21 ENSGT00940000155270.i.b.a.b #22 ENSGT00940000161508.b.e ENSGT00940000155126.s.a.b ENSGT00390000004553.g ENSGT00940000160059.a.b.a.a ENSGT00550000075037.c ENSGT00950000183165.a.a.b.o.b ENSGT00390000012721.b.q ENSGT00950000183055.a.a.e ENSGT00940000160718.c ENSGT00940000158453.a.e ENSGT01050000244955.a.a.i ENSGT01050000244897.a.b.b.a.b.a ENSGT00390000010543.k.a ENSGT00940000155318.b.b.a ENSGT00940000155502.s Common carp reference MODERN SPECIES 27 ENSCCRG00000071385 erbb4a (ENSCCRG00000015128) si:ch211-93g23.2 (ENSCCRG00000004282) klf7a (ENSCCRG00000043715) ENSCCRG00000023747 gtf3c3 (ENSCCRG00000023143) ENSCCRG00000023104 mdh1b (ENSCCRG00000023101) retreg2 (ENSCCRG00000063718) ENSCCRG00000023065 cnppd1 (ENSCCRG00000082729) abcb6a (ENSCCRG00000022872) ENSCCRG00000018765 pard3ba (ENSCCRG00000057087) #21 ENSCCRG00000073316 nrp2a (ENSCCRG00000005339) #22 cpo (ENSCCRG00000005401) fn1b (ENSCCRG00000017095) atic (ENSCCRG00000059023) mnx2b (ENSCCRG00000007561) stk16 (ENSCCRG00000007566) tuba8l2 (ENSCCRG00000007571) ndfip2 (ENSCCRG00000078945) spry2 (ENSCCRG00000072447) slitrk6 (ENSCCRG00000078661) SLITRK5 (ENSCCRG00000077853) gpc5a (ENSCCRG00000010392) gpc6a (ENSCCRG00000075847) ENSCCRG00000039024 FARP1 (ENSCCRG00000066559) kpnb3 (ENSCCRG00000022839) Golden-line barbel MODERN SPECIES 562 ENSSGRG00000046382 erbb4a (ENSSGRG00000046383) ube2f (ENSSGRG00000046384) si:ch211-93g23.2 (ENSSGRG00000046385) klf7a (ENSSGRG00000046387) HECW2 (ENSSGRG00000046418) gtf3c3 (ENSSGRG00000046479) ENSSGRG00000046612 mdh1b (ENSSGRG00000046613) retreg2 (ENSSGRG00000046614) ENSSGRG00000046615 cnppd1 (ENSSGRG00000046616) abcb6a (ENSSGRG00000046629) ENSSGRG00000046821 pard3ba (ENSSGRG00000046823) #21 nrp2a (ENSSGRG00000046827) #22 cpo (ENSSGRG00000046842) fn1b (ENSSGRG00000046843) atic (ENSSGRG00000046878) mnx2b (ENSSGRG00000048042) tuba8l2 (ENSSGRG00000048043) ndfip2 (ENSSGRG00000048046) spry2 (ENSSGRG00000048048) Zebrafish MODERN SPECIES erbb4a (ENSDARG00000063207) ube2f (ENSDARG00000025754) si:ch211-93g23.2 (ENSDARG00000070558) klf7a (ENSDARG00000073857) ENSDARG00000063253 ENSDARG00000113848 gtf3c3 (ENSDARG00000043247) ENSDARG00000074031 mdh1b (ENSDARG00000018008) retreg2 (ENSDARG00000063270) ENSDARG00000017537 cnppd1 (ENSDARG00000027078) abcb6a (ENSDARG00000063297) ENSDARG00000113935 #21 pard3ba (ENSDARG00000092671) #21 nrp2a (ENSDARG00000096546) #22 cpo (ENSDARG00000077688) fn1b (ENSDARG00000006526) mnx2b (ENSDARG00000030350) atic (ENSDARG00000016706) stk16 (ENSDARG00000037777) tuba8l2 (ENSDARG00000031164) ndfip2 (ENSDARG00000033928) spry2 (ENSDARG00000078308) slitrk6 (ENSDARG00000098769) gpc5a (ENSDARG00000103647) gpc6a (ENSDARG00000103156) ggact.1 (ENSDARG00000070581) ggact.2 (ENSDARG00000038248) ggact.3 (ENSDARG00000070579) ENSDARG00000095179 Cyprinoidei ANCESTRAL SPECIES 429 ENSGT00950000183214.a.b.a.b.f.b.a.b #21 ENSGT00940000155270.i.b.b #22 Cyprininae ANCESTRAL SPECIES 1379 ENSGT00950000183214.a.b.a.b.f.b.a.b #21 ENSGT00940000155270.i.b.b #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000155270.i.b.b #22 Golden-line barbel DUPLICATION Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 371 ENSSGRG00000015089 ENSSGRG00000015080 mdh1b (ENSSGRG00000015076) retreg2 (ENSSGRG00000015075) ENSSGRG00000015048 cnppd1 (ENSSGRG00000015017) abcb6a (ENSSGRG00000014835) ENSSGRG00000014813 ENSSGRG00000014812 ENSSGRG00000014810 #21 ENSSGRG00000014809 #22 ENSSGRG00000014808 #22 nrp2a (ENSSGRG00000014790) #22 cpo (ENSSGRG00000014789) fn1b (ENSSGRG00000006839) atic (ENSSGRG00000002514) ENSSGRG00000002437 stk16 (ENSSGRG00000002423) ENSSGRG00000002311 ndfip2 (ENSSGRG00000002306) spry2 (ENSSGRG00000002305) Golden-line barbel MODERN SPECIES 371 ENSSGRG00000015089 ENSSGRG00000015080 mdh1b (ENSSGRG00000015076) retreg2 (ENSSGRG00000015075) ENSSGRG00000015048 cnppd1 (ENSSGRG00000015017) abcb6a (ENSSGRG00000014835) ENSSGRG00000014813 ENSSGRG00000014812 ENSSGRG00000014810 #21 ENSSGRG00000014809 #22 ENSSGRG00000014808 #22 nrp2a (ENSSGRG00000014790) #22 cpo (ENSSGRG00000014789) fn1b (ENSSGRG00000006839) atic (ENSSGRG00000002514) ENSSGRG00000002437 stk16 (ENSSGRG00000002423) ENSSGRG00000002311 ndfip2 (ENSSGRG00000002306) spry2 (ENSSGRG00000002305) Golden-line barbel MODERN SPECIES 3296 ENSSGRG00000006344 #22 Euteleosteomorpha ANCESTRAL SPECIES 187 ENSGT00390000000292.B ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00530000063873.A #17 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 Protacanthopterygii ANCESTRAL SPECIES 138 ENSGT00940000157860 ENSGT00390000000292.B ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00940000154394.b.a.b ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000178309 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00940000175880 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00390000001170.a.b ENSGT00940000153470.a.a.a.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 110 ENSGT00940000162236.f ENSGT00950000182897.B.a.b.b.b.i ENSGT00950000183214.a.b.a.b.f.b.b.l.b #21 ENSGT00940000155270.i.b.c #22 ENSGT00940000156160.b.a.e.b.b ENSGT00390000000862.g ENSGT00950000183019.f.b.b.d.d ENSGT00940000164110.e ENSGT00940000154394.b.a.b.p.a.b ENSGT00940000154394.b.a.b.p.b ENSGT00530000063410.b.i ENSGT01030000234607.A.b ENSGT00940000178309.a.b ENSGT00940000178309.a.a.a ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k.b ENSGT00940000159160.h ENSGT00390000001170.a.b.a Salmoninae_a ANCESTRAL SPECIES 66 ENSGT00940000157860.i ENSGT00390000000292.B.o.a ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090.e ENSGT00940000156815.e ENSGT00940000167257.g ENSGT00530000063252.a.b.a.a.e ENSGT00390000008902.jb.c ENSGT00940000165208.a.d ENSGT00940000156271.a ENSGT00940000160594.g.b ENSGT00940000162236.f ENSGT00950000182897.B.a.b.b.b.i ENSGT00950000183214.a.b.a.b.f.b.b.l.b #21 ENSGT00940000155270.i.b.c #22 ENSGT00940000156160.b.a.e.b.b ENSGT00390000000862.g ENSGT00950000183019.f.b.b.d.c.b ENSGT00940000164110.e ENSGT00530000063410.b.i.a ENSGT00940000154394.b.a.b.p.a.b ENSGT00530000063410.b.j ENSGT01030000234607.A.b ENSGT00940000178309.a.b ENSGT00940000156552.c.b.i #14 ENSGT00390000009001 ENSGT00550000075118.k.b ENSGT00940000159160.h ENSGT00390000001170.a.b.a ENSGT00940000153470.a.a.a.a.c.a Oncorhynchus ANCESTRAL SPECIES 43 ENSGT00940000157860.i ENSGT00390000000292.B.o.a ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090.e ENSGT00940000156815.e ENSGT00940000167257.g ENSGT00530000063252.a.b.a.a.e ENSGT00390000008902.jb.c ENSGT00940000165208.a.d ENSGT00940000156271.a ENSGT00940000160594.g.b ENSGT00940000162236.f ENSGT00950000182897.B.a.b.b.b.i ENSGT00950000183214.a.b.a.b.f.b.b.l.b #21 ENSGT00940000155270.i.b.c #22 ENSGT00940000156160.b.a.e.b.b ENSGT00390000000862.g ENSGT00950000183019.f.b.b.d.c.b ENSGT00940000164110.e ENSGT00940000154394.b.a.b.p.a.b ENSGT00530000063410.b.j ENSGT01030000234607.A.b ENSGT00940000178309.a.b.a ENSGT00940000156552.c.b.i #14 ENSGT00390000009001 ENSGT00550000075118.k.b ENSGT00390000001170.a.b.a ENSGT00940000153470.a.a.a.a.c.a ENSGT00940000159094.e.c ENSGT00950000182836.b.b.b.a.l.b Rainbow trout MODERN SPECIES 28 gart (ENSOMYG00000012015) n6amt1 (ENSOMYG00000011921) ENSOMYG00000011912 ADAMTS5 (ENSOMYG00000011879) ADAMTS1 (ENSOMYG00000011856) cyyr1 (ENSOMYG00000011842) APP (ENSOMYG00000010827) atp5pf (ENSOMYG00000010676) jam2a (ENSOMYG00000010669) mrpl39 (ENSOMYG00000010539) ENSOMYG00000010507 ENSOMYG00000010500 ENSOMYG00000073028 ENSOMYG00000010476 ENSOMYG00000010430 #21 ENSOMYG00000009345 #22 abcb6a (ENSOMYG00000008750) cnppd1 (ENSOMYG00000008360) retreg2 (ENSOMYG00000008253) ENSOMYG00000053822 mdh1b (ENSOMYG00000008096) ENSOMYG00000008031 ENSOMYG00000007851 ENSOMYG00000007640 #14 spp2 (ENSOMYG00000007382) ENSOMYG00000059805 ENSOMYG00000007325 ENSOMYG00000007256 ENSOMYG00000052504 ENSOMYG00000007149 agpat3 (ENSOMYG00000007079) Oncorhynchus_a ANCESTRAL SPECIES 77 ENSGT00940000157860.i ENSGT00390000000292.B.o.a ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090.e ENSGT00940000156815.e ENSGT00940000167257.g ENSGT00530000063252.a.b.a.a.e ENSGT00390000008902.jb.c ENSGT00940000165208.a.d ENSGT00940000156271.a ENSGT00940000160594.g.b ENSGT00940000162236.f ENSGT00950000182897.B.a.b.b.b.i ENSGT00950000183214.a.b.a.b.f.b.b.l.b #21 ENSGT00940000155270.i.b.c #22 ENSGT00940000156160.b.a.e.b.b ENSGT00390000000862.g ENSGT00950000183019.f.b.b.d.c.b ENSGT00940000164110.e ENSGT00940000154394.b.a.a.a.b.a.b.b ENSGT00530000063410.b.j ENSGT00940000171355 ENSGT01030000234607.A.b ENSGT00940000178309.a.b.a ENSGT00940000156552.c.b.i #14 ENSGT00390000009001 ENSGT00550000075118.k.b ENSGT00390000001170.a.b.a ENSGT00940000153470.a.a.a.a.c.a ENSGT00940000159094.e.c Coho salmon MODERN SPECIES 25 ENSOKIG00005023274 gart (ENSOKIG00005023156) n6amt1 (ENSOKIG00005023129) ENSOKIG00005023085 ADAMTS5 (ENSOKIG00005023067) ADAMTS1 (ENSOKIG00005023050) cyyr1 (ENSOKIG00005023039) APP (ENSOKIG00005016232) atp5pf (ENSOKIG00005015913) jam2a (ENSOKIG00005015899) mrpl39 (ENSOKIG00005015890) RAP2A (ENSOKIG00005015880) B3GNT4 (ENSOKIG00005015877) mbnl2 (ENSOKIG00005015771) ENSOKIG00005015730 #21 NRP2 (ENSOKIG00005015676) #22 abcb6a (ENSOKIG00005015429) cnppd1 (ENSOKIG00005015367) retreg2 (ENSOKIG00005015321) ENSOKIG00005015308 mdh1b (ENSOKIG00005015216) ENSOKIG00005015200 ENSOKIG00005015160 raph1b (ENSOKIG00005014835) #14 ENSOKIG00005014796 alg11 (ENSOKIG00005014761) TMEM163 (ENSOKIG00005014740) MGAT5 (ENSOKIG00005014718) ENSOKIG00005014622 agpat3 (ENSOKIG00005014611) pdxkb (ENSOKIG00005014454) Chinook salmon MODERN SPECIES 31 NCAM2 (ENSOTSG00005045701) gart (ENSOTSG00005045697) n6amt1 (ENSOTSG00005045695) ENSOTSG00005045694 ADAMTS5 (ENSOTSG00005045693) ADAMTS1 (ENSOTSG00005045691) cyyr1 (ENSOTSG00005045690) APP (ENSOTSG00005034599) atp5pf (ENSOTSG00005034521) jam2a (ENSOTSG00005034520) mrpl39 (ENSOTSG00005034514) rap2ab (ENSOTSG00005034512) B3GNT4 (ENSOTSG00005034511) mbnl2 (ENSOTSG00005034499) ENSOTSG00005034497 #21 nrp2a (ENSOTSG00005033871) #22 abcb6a (ENSOTSG00005033705) cnppd1 (ENSOTSG00005033692) ENSOTSG00005033690 retreg2 (ENSOTSG00005033688) ENSOTSG00005033687 ENSOTSG00005033686 mdh1b (ENSOTSG00005033685) ENSOTSG00005033684 ENSOTSG00005033682 ENSOTSG00005033683 raph1b (ENSOTSG00005033680) #14 ENSOTSG00005033678 alg11 (ENSOTSG00005033677) TMEM163 (ENSOTSG00005033676) mgat5 (ENSOTSG00005033675) Salmo ANCESTRAL SPECIES 41 ENSGT00940000157860.i ENSGT00390000000292.B.o.a ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090.e ENSGT00940000156815.e ENSGT00940000167257.g ENSGT00530000063252.a.b.a.a.e ENSGT00390000008902.jb.c ENSGT00940000165208.a.d ENSGT00940000156271.a ENSGT00940000160594.g.b ENSGT00940000162236.f ENSGT00950000182897.B.a.b.b.b.i ENSGT00950000183214.a.b.a.b.f.b.b.l.b #21 ENSGT00940000155270.i.b.c #22 ENSGT00940000156160.b.a.e.b.b ENSGT00390000000862.g ENSGT00950000183019.f.b.b.d.c.b ENSGT00940000164110.e ENSGT00530000063410.b.i.a ENSGT01030000234607.A.b ENSGT00940000178309.a.b ENSGT00940000156552.c.b.i #14 ENSGT00390000009001 ENSGT00940000159160.h ENSGT00390000001170.a.b.a ENSGT00940000153470.a.a.a.a.c.a ENSGT00940000159094.e.c.a ENSGT00950000182836.b.b.b.a.l.b ENSGT00390000003874.a.b.a River trout MODERN SPECIES 32 ENSSTUG00000048589 ENSSTUG00000048588 ENSSTUG00000048573 ADAMTS5 (ENSSTUG00000048566) ADAMTS1 (ENSSTUG00000048538) cyyr1 (ENSSTUG00000048529) APP (ENSSTUG00000044041) atp5pf (ENSSTUG00000043843) jam2a (ENSSTUG00000043838) mrpl39 (ENSSTUG00000043755) rap2ab (ENSSTUG00000043745) B3GNT4 (ENSSTUG00000043741) mbnl2 (ENSSTUG00000043661) ENSSTUG00000043646 ENSSTUG00000043578 #21 NRP2 (ENSSTUG00000042374) #22 abcb6a (ENSSTUG00000041559) cnppd1 (ENSSTUG00000041474) ENSSTUG00000041416 ENSSTUG00000041373 mdh1b (ENSSTUG00000041334) retreg2 (ENSSTUG00000041261) ENSSTUG00000041245 mdh1b (ENSSTUG00000041154) ENSSTUG00000041109 ENSSTUG00000041050 raph1b (ENSSTUG00000040779) #14 ENSSTUG00000040719 cpb2 (ENSSTUG00000040657) TMEM163 (ENSSTUG00000040616) mgat5 (ENSSTUG00000040541) Atlantic salmon MODERN SPECIES 8 n6amt1 (ENSSSAG00000040715) ENSSSAG00000099279 ENSSSAG00000104255 adamts5 (ENSSSAG00000056031) ADAMTS1 (ENSSSAG00000006353) cyyr1 (ENSSSAG00000117372) APP (ENSSSAG00000040997) atp5pf (ENSSSAG00000056066) jam2a (ENSSSAG00000115571) mrpl39 (ENSSSAG00000056079) ENSSSAG00000095516 ENSSSAG00000114712 ENSSSAG00000056096 ENSSSAG00000110977 ENSSSAG00000056133 #21 ENSSSAG00000056169 #22 abcb6a (ENSSSAG00000059269) ENSSSAG00000060198 retreg2 (ENSSSAG00000060269) mdh1b (ENSSSAG00000060346) ENSSSAG00000060420 ENSSSAG00000083857 ENSSSAG00000102619 ENSSSAG00000060437 raph1b (ENSSSAG00000060548) #14 ENSSSAG00000006012 cpb2 (ENSSSAG00000007748) ENSSSAG00000006090 ENSSSAG00000006107 ENSSSAG00000006203 plcc (ENSSSAG00000006312) Huchen MODERN SPECIES 941 nrp2a (ENSHHUG00000005186) #22 abcb6a (ENSHHUG00000005274) cnppd1 (ENSHHUG00000005306) ENSHHUG00000005317 retreg2 (ENSHHUG00000005320) ENSHHUG00000005326 mdh1b (ENSHHUG00000005339) ENSHHUG00000005375 ENSHHUG00000005384 RAPH1 (ENSHHUG00000005421) #14 spp2 (ENSHHUG00000005460) alg11 (ENSHHUG00000005514) cpb2 (ENSHHUG00000005541) TMEM163 (ENSHHUG00000005550) MGAT5 (ENSHHUG00000005577) Salmoninae ANCESTRAL SPECIES 445 ENSGT00940000157860.i ENSGT00390000000292.B.o.a ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090.e ENSGT00940000156815.e ENSGT00940000167257.g ENSGT00530000063252.a.b.a.a.e ENSGT00390000008902.jb.c ENSGT00940000165208.a.d ENSGT00940000156271.a ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b.j ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b.l.a.b #21 ENSGT00940000155270.i.b.d #22 ENSGT00940000156160.b.a.e.b.a ENSGT00390000000862.h ENSGT00950000183019.f.b.b.d.c ENSGT00940000164110.f ENSGT00940000154394.b.a.b.p.a.a ENSGT00530000063410.b.j ENSGT00940000171355 Salmoninae_a ANCESTRAL SPECIES 66 ENSGT01050000244905.A.a.n.b ENSGT00390000010463.a.b.c.a.f ENSGT00940000165672.r ENSGT00390000006330.a.a.b.c ENSGT00530000063599.B.m.a ENSGT00940000155311.B ENSGT00940000154486.b.b.b.a.b ENSGT00940000154486.b.a.a.b.e.a.b.e ENSGT00940000160532.g.h ENSGT00940000161997.a.j ENSGT00390000013151.a.a.a.d ENSGT00940000160639.b.a.b.b.a.b ENSGT00950000182897.B.a.b.b.b.j ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b.l.a.b #21 ENSGT00940000155270.i.b.d #22 ENSGT00940000156160.b.a.e.b.a ENSGT00390000000862.h ENSGT00950000183019.f.b.b.d.c.a ENSGT00940000164110.f ENSGT00940000154394.b.a.b.p.b ENSGT00530000063410.b.i.b ENSGT00940000178309.a.a.a ENSGT00940000156552.c.b.j #14 ENSGT00940000175880 ENSGT00550000075118.k.a ENSGT00940000159160.g ENSGT00390000001170.a.b.b ENSGT00940000153470.a.a.a.a.c.b.a.a ENSGT00940000159094.e.d ENSGT00950000182836.b.b.b.a.l.a Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00940000155696.ub.f ENSGT01100000263563.c.a.b.e ENSGT00940000174429 ENSGT00940000167257.h.b ENSGT00940000157860.j ENSGT00390000000292.B.o.b ENSGT00940000159090.f ENSGT00940000156815.f ENSGT00940000167257.h.a ENSGT00530000063252.a.b.a.a.f ENSGT00390000008902.jb.d ENSGT00940000165208.a.c ENSGT00950000182897.B.a.b.b.b.j ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b.l.a.b #21 ENSGT00940000155270.i.b.d #22 ENSGT00940000156160.b.a.e.b.a ENSGT00390000000862.h ENSGT00950000183019.f.b.b.d.c.a ENSGT00940000164110.f ENSGT00940000154394.b.a.b.p.a.a ENSGT00940000154394.b.a.a.a.b.a.b.a ENSGT00530000063410.b.i.b Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00940000156564.b.c.a ENSGT00940000161407.b.d ENSGT00940000155696.ub.f ENSGT01100000263563.c.a.b.e ENSGT00940000157860.j ENSGT00390000000292.B.o.b ENSGT00940000159090.f ENSGT00940000156815.f ENSGT00940000167257.h.a ENSGT00530000063252.a.b.a.a.f ENSGT00390000008902.jb.d ENSGT00940000165208.a.c ENSGT00950000182897.B.a.b.b.b.j ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b.k #21 ENSGT00940000155270.i.b.d #22 ENSGT00940000156160.b.a.e.b.a ENSGT00940000167257.h.b ENSGT00950000183019.f.b.b.d.c.a ENSGT00940000164110.f ENSGT00940000154394.b.a.a.a.b.a.b.a ENSGT00530000063410.b.i.b ENSGT00940000178309.a.a.a ENSGT00940000156552.c.b.j #14 ENSGT00550000075118.k.a ENSGT00940000159160.g ENSGT00390000001170.a.b.b ENSGT00940000153470.a.a.a.a.c.b.a.a ENSGT00940000159094.e.d ENSGT00950000182836.b.b.b.a.l.a ENSGT00390000003874.a.b.b Chinook salmon DUPLICATION Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 31 ENSOTSG00005013133 nab1a (ENSOTSG00005013134) ENSOTSG00005013135 ENSOTSG00005013136 ENSOTSG00005013138 ENSOTSG00005013141 ENSOTSG00005013664 ADAMTS5 (ENSOTSG00005013665) ADAMTS1 (ENSOTSG00005013666) cyyr1 (ENSOTSG00005013667) APP (ENSOTSG00005013696) atp5pf (ENSOTSG00005021941) jam2a (ENSOTSG00005021945) mbnl2 (ENSOTSG00005021953) ENSOTSG00005021955 ENSOTSG00005021956 #22 abcb6a (ENSOTSG00005022200) abcb6a (ENSOTSG00005021957) cnppd1 (ENSOTSG00005022249) ENSOTSG00005022252 retreg2 (ENSOTSG00005022254) ENSOTSG00005022256 ENSOTSG00005022257 raph1b (ENSOTSG00005022258) #14 alg11 (ENSOTSG00005022262) cpb2 (ENSOTSG00005022263) TMEM163 (ENSOTSG00005022264) mgat5 (ENSOTSG00005022269) PTH2R (ENSOTSG00005022295) agpat3 (ENSOTSG00005022299) pdxkb (ENSOTSG00005022300) Chinook salmon MODERN SPECIES 5 NALF1 (ENSOTSG00005006772) cckbra (ENSOTSG00005006771) ENSOTSG00005006757 p2rx3b (ENSOTSG00005006755) ENSOTSG00005003379 ENSOTSG00005001941 ADAMTS5 (ENSOTSG00005046524) ADAMTS1 (ENSOTSG00005046523) cyyr1 (ENSOTSG00005046522) APP (ENSOTSG00005045345) atp5pf (ENSOTSG00005045331) jam2a (ENSOTSG00005045330) mbnl2 (ENSOTSG00005045329) ENSOTSG00005045327 ENSOTSG00005045326 #21 ENSOTSG00005045325 #22 ENSOTSG00005045324 #22 abcb6a (ENSOTSG00005044825) cnppd1 (ENSOTSG00005044815) ENSOTSG00005044813 retreg2 (ENSOTSG00005044814) ENSOTSG00005044812 mdh1b (ENSOTSG00005044811) ENSOTSG00005044810 raph1b (ENSOTSG00005044808) #14 alg11 (ENSOTSG00005044804) cpb2 (ENSOTSG00005044803) TMEM163 (ENSOTSG00005044801) mgat5 (ENSOTSG00005044799) PTH2R (ENSOTSG00005044795) agpat3 (ENSOTSG00005044788) Chinook salmon MODERN SPECIES 5 cckbra (ENSOTSG00005006771) ENSOTSG00005006757 p2rx3b (ENSOTSG00005006755) ENSOTSG00005003379 ENSOTSG00005001941 ADAMTS5 (ENSOTSG00005046524) ADAMTS1 (ENSOTSG00005046523) cyyr1 (ENSOTSG00005046522) APP (ENSOTSG00005045345) atp5pf (ENSOTSG00005045331) jam2a (ENSOTSG00005045330) mbnl2 (ENSOTSG00005045329) ENSOTSG00005045327 ENSOTSG00005045326 #21 ENSOTSG00005045325 #22 ENSOTSG00005045324 #22 abcb6a (ENSOTSG00005044825) cnppd1 (ENSOTSG00005044815) ENSOTSG00005044813 retreg2 (ENSOTSG00005044814) ENSOTSG00005044812 mdh1b (ENSOTSG00005044811) ENSOTSG00005044810 raph1b (ENSOTSG00005044808) #14 alg11 (ENSOTSG00005044804) cpb2 (ENSOTSG00005044803) TMEM163 (ENSOTSG00005044801) mgat5 (ENSOTSG00005044799) PTH2R (ENSOTSG00005044795) agpat3 (ENSOTSG00005044788) pdxkb (ENSOTSG00005044714) Coho salmon MODERN SPECIES 7 irs2a (ENSOKIG00005004988) ENSOKIG00005004996 ENSOKIG00005005197 ENSOKIG00005005202 ENSOKIG00005005216 NCAM2 (ENSOKIG00005005308) ENSOKIG00005006935 ENSOKIG00005006981 ADAMTS5 (ENSOKIG00005006993) ADAMTS1 (ENSOKIG00005007005) cyyr1 (ENSOKIG00005007054) APP (ENSOKIG00005007296) atp5pf (ENSOKIG00005011261) ENSOKIG00005011275 ENSOKIG00005011393 nrp2a (ENSOKIG00005028183) #22 abcb6a (ENSOKIG00005028626) cnppd1 (ENSOKIG00005029096) ENSOKIG00005029127 cpb2 (ENSOKIG00005029166) retreg2 (ENSOKIG00005029180) ENSOKIG00005029207 mdh1b (ENSOKIG00005029217) ENSOKIG00005029256 raph1b (ENSOKIG00005029357) #14 alg11 (ENSOKIG00005030601) TMEM163 (ENSOKIG00005030622) mgat5 (ENSOKIG00005030698) PTH2R (ENSOKIG00005030757) agpat3 (ENSOKIG00005030992) pdxkb (ENSOKIG00005031043) Rainbow trout MODERN SPECIES 9 ENSOMYG00000048716 ENSOMYG00000072204 ENSOMYG00000039536 gart (ENSOMYG00000039007) ADAMTS5 (ENSOMYG00000038992) ADAMTS1 (ENSOMYG00000038970) cyyr1 (ENSOMYG00000038941) ENSOMYG00000073330 APP (ENSOMYG00000035519) atp5pf (ENSOMYG00000035082) ENSOMYG00000062853 jam2a (ENSOMYG00000035074) ENSOMYG00000034998 ENSOMYG00000034953 ENSOMYG00000034939 #21 ENSOMYG00000034886 #22 abcb6a (ENSOMYG00000034474) cnppd1 (ENSOMYG00000034310) ENSOMYG00000034291 ENSOMYG00000038150 retreg2 (ENSOMYG00000034273) ENSOMYG00000034261 mdh1b (ENSOMYG00000049353) ENSOMYG00000034252 raph1b (ENSOMYG00000034223) #14 ENSOMYG00000063522 alg11 (ENSOMYG00000034204) cpb2 (ENSOMYG00000034176) ENSOMYG00000039305 ENSOMYG00000034120 ENSOMYG00000034060 Salmo ANCESTRAL SPECIES 48 ENSGT00940000161407.b.d ENSGT00860000133881.k.a ENSGT00940000155696.ub.f ENSGT01100000263563.c.a.b.e ENSGT00940000157860.j ENSGT00390000000292.B.o.b ENSGT00940000159090.f ENSGT00940000156815.f ENSGT00940000167257.h ENSGT00530000063252.a.b.a.a.f ENSGT00390000008902.jb.d ENSGT00940000165208.a.c ENSGT00940000156271.b ENSGT00950000182897.B.a.b.b.b.j ENSGT00940000155270.i.b.d #22 ENSGT00940000156160.b.a.e.b.a ENSGT00390000000862.h ENSGT00950000183019.f.b.b.d.c.a ENSGT00940000164110.f ENSGT00940000154394.b.a.b.p.b ENSGT00530000063410.b.i.b ENSGT00940000178309.a.a.a ENSGT00940000156552.c.b.j #14 ENSGT00940000175880 ENSGT00550000075118.k.a ENSGT00940000159160.g ENSGT00390000001170.a.b.b ENSGT00940000153470.a.a.a.a.c.b.b ENSGT00940000159094.e.d ENSGT00950000182836.b.b.b.a.l.a River trout MODERN SPECIES 36 rab20 (ENSSTUG00000003818) irs2a (ENSSTUG00000003833) NALF1 (ENSSTUG00000003936) ENSSTUG00000003998 NCAM2 (ENSSTUG00000004313) gart (ENSSTUG00000005597) ADAMTS5 (ENSSTUG00000005623) ADAMTS1 (ENSSTUG00000005640) cyyr1 (ENSSTUG00000005661) APP (ENSSTUG00000006124) atp5pf (ENSSTUG00000013036) jam2a (ENSSTUG00000013054) ENSSTUG00000013078 mrpl39 (ENSSTUG00000013093) mbnl2 (ENSSTUG00000013152) nrp2a (ENSSTUG00000013297) #22 abcb6a (ENSSTUG00000013395) cnppd1 (ENSSTUG00000013824) ENSSTUG00000013834 retreg2 (ENSSTUG00000013855) ENSSTUG00000013869 mdh1b (ENSSTUG00000013892) ENSSTUG00000013913 raph1b (ENSSTUG00000013989) #14 alg11 (ENSSTUG00000014844) cpb2 (ENSSTUG00000014857) ENSSTUG00000014878 TMEM163 (ENSSTUG00000014881) mgat5 (ENSSTUG00000014911) PTH2R (ENSSTUG00000014994) agpat3 (ENSSTUG00000015126) Atlantic salmon MODERN SPECIES 7 ENSSSAG00000039878 ENSSSAG00000086157 cckbra (ENSSSAG00000039914) ENSSSAG00000039012 ENSSSAG00000006092 ADAMTS5 (ENSSSAG00000112181) ADAMTS1 (ENSSSAG00000109512) cyyr1 (ENSSSAG00000006389) ENSSSAG00000105094 APP (ENSSSAG00000006479) atp5pf (ENSSSAG00000007100) jam2a (ENSSSAG00000056071) mrpl39 (ENSSSAG00000081852) ENSSSAG00000105688 ENSSSAG00000108386 ENSSSAG00000007167 #22 abcb6a (ENSSSAG00000007343) ENSSSAG00000101271 abcb6a (ENSSSAG00000082548) ENSSSAG00000007632 retreg2 (ENSSSAG00000007641) ENSSSAG00000086381 mdh1b (ENSSSAG00000007657) ENSSSAG00000007664 ENSSSAG00000007675 #14 ENSSSAG00000087440 ENSSSAG00000007736 alg11 (ENSSSAG00000007741) cpb2 (ENSSSAG00000104799) ENSSSAG00000086044 ENSSSAG00000007767 Huchen MODERN SPECIES 887 ENSHHUG00000027104 rap2ab (ENSHHUG00000027108) mbnl2 (ENSHHUG00000027144) ENSHHUG00000027200 #21 ENSHHUG00000027213 nrp2a (ENSHHUG00000027217) #22 Northern pike MODERN SPECIES 21 cckbra (ENSELUG00000006768) ENSELUG00000006754 ENSELUG00000031338 ENSELUG00000006747 ENSELUG00000025311 ENSELUG00000029745 NCAM2 (ENSELUG00000020483) mrpl39 (ENSELUG00000020353) jam2a (ENSELUG00000020322) atp5pf (ENSELUG00000020272) rpz4 (ENSELUG00000020236) rpz (ENSELUG00000020232) ENSELUG00000020210 mbnl2 (ENSELUG00000020187) ENSELUG00000020140 #21 nrp2a (ENSELUG00000020100) #22 abcb6a (ENSELUG00000020023) ENSELUG00000015046 ENSELUG00000030556 ENSELUG00000012024 ENSELUG00000014987 ENSELUG00000007685 ENSELUG00000034465 zgc:172122 (ENSELUG00000012061) ENSELUG00000000435 u2af1 (ENSELUG00000011997) cbsa (ENSELUG00000011972) ENSELUG00000011923 HSF2BP (ENSELUG00000011905) TRAPPC10 (ENSELUG00000011855) gsk3ba (ENSELUG00000011750) Acanthomorphata ANCESTRAL SPECIES 87 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00530000063873.A #17 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 ENSGT00950000183030 Euacanthomorphacea ANCESTRAL SPECIES 36 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00530000063873.A #17 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Percomorphaceae ANCESTRAL SPECIES 22 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00530000063873.A #17 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Tiger tail seahorse MODERN SPECIES 275 cenpl (ENSHCOG00000011511) FUNDC1 (ENSHCOG00000011500) kdm6al (ENSHCOG00000011482) ENSHCOG00000011442 ADAMTS5 (ENSHCOG00000011429) ADAMTS1 (ENSHCOG00000011424) cyyr1 (ENSHCOG00000011420) APP (ENSHCOG00000011389) atp5pf (ENSHCOG00000011300) jam2a (ENSHCOG00000011292) mrpl39 (ENSHCOG00000011280) rap2ab (ENSHCOG00000011271) mbnl2 (ENSHCOG00000011265) ENSHCOG00000011256 ENSHCOG00000011242 #21 nrp2a (ENSHCOG00000011133) #22 abcb6a (ENSHCOG00000010225) cnppd1 (ENSHCOG00000010135) ENSHCOG00000010096 retreg2 (ENSHCOG00000009888) mdh1b (ENSHCOG00000009881) ENSHCOG00000009863 ENSHCOG00000009853 ENSHCOG00000009834 raph1b (ENSHCOG00000009809) #14 alg11 (ENSHCOG00000009773) cpb2 (ENSHCOG00000000303) ENSHCOG00000009742 rpl31 (ENSHCOG00000009739) chst10 (ENSHCOG00000009726) chst10 (ENSHCOG00000009716) Percomorphaceae_B ANCESTRAL SPECIES 22 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 Ovalentaria ANCESTRAL SPECIES 23 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 Atherinomorphae ANCESTRAL SPECIES 24 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Oryzias ANCESTRAL SPECIES 26 ENSGT00940000155360.B.k ENSGT00940000162479.a ENSGT00940000157849.n.c ENSGT00940000157872 ENSGT00940000156984.a.a ENSGT00940000155814.m ENSGT00940000153676.b ENSGT00390000004360.a.b.a.a.b ENSGT00940000157874.q.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Oryzias_b ANCESTRAL SPECIES 76 ENSGT00940000157849.n.c ENSGT00940000157872 ENSGT00940000156984.a.a ENSGT00940000155814.m ENSGT00940000153676.b ENSGT00390000004360.a.b.a.a.b ENSGT00940000157874.q.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b ENSGT00940000155107.b.a Indian medaka MODERN SPECIES 24 ATP11A (ENSOMEG00000008640) tubgcp3 (ENSOMEG00000008513) FGF14 (ENSOMEG00000008408) rcbtb1 (ENSOMEG00000008349) cdadc1 (ENSOMEG00000008283) cab39l (ENSOMEG00000008249) MCF2L (ENSOMEG00000008166) ENSOMEG00000007964 ENSOMEG00000007881 rap2ab (ENSOMEG00000007869) mbnl2 (ENSOMEG00000007821) ENSOMEG00000007712 ENSOMEG00000007702 ENSOMEG00000007632 #21 ENSOMEG00000007428 nrp2a (ENSOMEG00000007409) #22 abcb6a (ENSOMEG00000007360) cnppd1 (ENSOMEG00000007313) ENSOMEG00000007283 retreg2 (ENSOMEG00000007242) mdh1b (ENSOMEG00000007226) ENSOMEG00000007199 ENSOMEG00000007170 raph1b (ENSOMEG00000007149) #14 alg11 (ENSOMEG00000007110) cpb2 (ENSOMEG00000007089) zc3h13 (ENSOMEG00000007044) rpl31 (ENSOMEG00000006975) chst10 (ENSOMEG00000006938) MAP4K4 (ENSOMEG00000006878) ENSOMEG00000006666 Javanese ricefish MODERN SPECIES 11 ENSOJAG00000011800 ENSOJAG00000011745 ENSOJAG00000011730 rcbtb1 (ENSOJAG00000011586) cdadc1 (ENSOJAG00000011573) cab39l (ENSOJAG00000011564) MCF2L (ENSOJAG00000009688) ENSOJAG00000008325 mrpl39 (ENSOJAG00000008285) ENSOJAG00000008271 mbnl2 (ENSOJAG00000008159) ENSOJAG00000008127 ENSOJAG00000008098 ENSOJAG00000008044 ENSOJAG00000008014 #21 nrp2a (ENSOJAG00000005308) #22 cnppd1 (ENSOJAG00000004998) ENSOJAG00000004832 retreg2 (ENSOJAG00000004813) mdh1b (ENSOJAG00000004804) ENSOJAG00000004773 ENSOJAG00000004700 cpb2 (ENSOJAG00000004393) ENSOJAG00000004385 rpl31 (ENSOJAG00000004333) alg11 (ENSOJAG00000004306) chst10 (ENSOJAG00000004285) ENSOJAG00000003415 ENSOJAG00000003322 KYNU (ENSOJAG00000003284) n6amt1 (ENSOJAG00000003275) Oryzias_a ANCESTRAL SPECIES 28 ENSGT00940000155360.B.k ENSGT00940000162479.a ENSGT00940000157849.n.c ENSGT00940000157872 ENSGT00940000156984.a.a ENSGT00940000155814.m ENSGT00940000153676.b ENSGT00390000004360.a.b.a.a.b ENSGT00940000157874.q.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 ENSGT00950000183030 ENSGT00940000157128 Japanese Medaka HdrR MODERN SPECIES 11 ENSORLG00000027672 ATP11A (ENSORLG00000005793) tubgcp3 (ENSORLG00000005732) ENSORLG00000025057 ENSORLG00000025753 rcbtb1 (ENSORLG00000005672) cdadc1 (ENSORLG00000005666) cab39l (ENSORLG00000005654) ENSORLG00000005630 ENSORLG00000005481 mrpl39 (ENSORLG00000005447) rap2ab (ENSORLG00000005426) mbnl2 (ENSORLG00000005419) ENSORLG00000005414 ENSORLG00000025601 #21 nrp2a (ENSORLG00000005395) #22 abcb6a (ENSORLG00000005333) cnppd1 (ENSORLG00000005312) ENSORLG00000005307 retreg2 (ENSORLG00000005285) mdh1b (ENSORLG00000005272) ENSORLG00000005262 ENSORLG00000005254 raph1b (ENSORLG00000005250) #14 alg11 (ENSORLG00000005232) cpb2 (ENSORLG00000005225) zc3h13 (ENSORLG00000005201) rpl31 (ENSORLG00000005178) chst10 (ENSORLG00000005171) MAP4K4 (ENSORLG00000005156) ENSORLG00000029243 Chinese medaka MODERN SPECIES 23 ENSOSIG00000012151 ENSOSIG00000012152 arhgef7b (ENSOSIG00000012154) ATP11A (ENSOSIG00000012166) tubgcp3 (ENSOSIG00000013177) ENSOSIG00000013183 rcbtb1 (ENSOSIG00000013184) cdadc1 (ENSOSIG00000013188) cab39l (ENSOSIG00000013191) MCF2L (ENSOSIG00000013196) ENSOSIG00000013224 mrpl39 (ENSOSIG00000013673) rap2ab (ENSOSIG00000013675) mbnl2 (ENSOSIG00000013683) ENSOSIG00000013793 #21 nrp2a (ENSOSIG00000013827) #22 abcb6a (ENSOSIG00000000003) cnppd1 (ENSOSIG00000000013) retreg2 (ENSOSIG00000000032) ENSOSIG00000000045 ENSOSIG00000000052 raph1b (ENSOSIG00000000169) #14 alg11 (ENSOSIG00000000590) cpb2 (ENSOSIG00000000591) ENSOSIG00000000592 ENSOSIG00000000594 rpl31 (ENSOSIG00000000598) chst10 (ENSOSIG00000000602) ENSOSIG00000000647 ENSOSIG00000010322 KYNU (ENSOSIG00000010327) Cyprinodontiformes ANCESTRAL SPECIES 25 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b ENSGT00940000155107.b.a Aplocheiloidei ANCESTRAL SPECIES 37 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00950000183030 ENSGT00730000111163 ENSGT00940000157128 ENSGT00940000155063.a.b ENSGT00940000155107.b.a Mangrove rivulus MODERN SPECIES 230 cndp1 (ENSKMAG00000020071) taf2 (ENSKMAG00000020003) ENSKMAG00000019955 ENSKMAG00000019942 ENSKMAG00000019904 ENSKMAG00000019884 ENSKMAG00000019836 #21 nrp2a (ENSKMAG00000019806) #22 abcb6a (ENSKMAG00000019733) cnppd1 (ENSKMAG00000019713) ENSKMAG00000019699 retreg2 (ENSKMAG00000019678) mdh1b (ENSKMAG00000019619) ENSKMAG00000019526 ENSKMAG00000019482 raph1b (ENSKMAG00000019447) #14 alg11 (ENSKMAG00000019422) cpb2 (ENSKMAG00000019399) Turquoise killifish MODERN SPECIES 1615 ENSNFUG00015000186 ENSNFUG00015000175 ENSNFUG00015023970 ADAMTS5 (ENSNFUG00015023939) ADAMTS1 (ENSNFUG00015023932) cyyr1 (ENSNFUG00015023928) APP (ENSNFUG00015022910) atp5pf (ENSNFUG00015022776) JAM2A (ENSNFUG00015022774) MRPL39 (ENSNFUG00015022769) rap2ab (ENSNFUG00015022765) mbnl2 (ENSNFUG00015022750) ENSNFUG00015022735 ENSNFUG00015022734 ENSNFUG00015022718 #21 NRP2 (ENSNFUG00015022587) #22 ENSNFUG00015022569 abcb6a (ENSNFUG00015021916) cnppd1 (ENSNFUG00015021868) ENSNFUG00015021844 FAM134A (ENSNFUG00015021837) mdh1b (ENSNFUG00015021836) FASTKD2 (ENSNFUG00015021833) ENSNFUG00015021828 raph1b (ENSNFUG00015021263) #14 ALG11 (ENSNFUG00015021241) cpb2 (ENSNFUG00015021229) ZC3H13 (ENSNFUG00015021222) chst10 (ENSNFUG00015021219) MAP4K4 (ENSNFUG00015020909) ZC3H12C (ENSNFUG00015020892) Cyprinodontoidei ANCESTRAL SPECIES 26 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b ENSGT00940000155107.b.a NAME_4 ANCESTRAL SPECIES 76 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518.o ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b ENSGT00940000155107.b.a Mummichog MODERN SPECIES 980 cenpl (ENSFHEG00000019874) FUNDC1 (ENSFHEG00000019897) kdm6al (ENSFHEG00000020075) ENSFHEG00000020146 ADAMTS5 (ENSFHEG00000020158) ADAMTS1 (ENSFHEG00000020221) cyyr1 (ENSFHEG00000020273) APP (ENSFHEG00000020327) atp5pf (ENSFHEG00000020336) jam2a (ENSFHEG00000020353) mrpl39 (ENSFHEG00000020373) rap2ab (ENSFHEG00000020379) mbnl2 (ENSFHEG00000020400) ENSFHEG00000020418 ENSFHEG00000020434 #21 nrp2a (ENSFHEG00000020462) #22 abcb6a (ENSFHEG00000020529) cnppd1 (ENSFHEG00000020537) ENSFHEG00000020542 retreg2 (ENSFHEG00000000729) mdh1b (ENSFHEG00000020591) ENSFHEG00000020606 ENSFHEG00000020630 raph1b (ENSFHEG00000020732) #14 alg11 (ENSFHEG00000020747) cpb2 (ENSFHEG00000020769) ENSFHEG00000020784 ENSFHEG00000020795 rpl31 (ENSFHEG00000020810) chst10 (ENSFHEG00000020855) MAP4K4 (ENSFHEG00000021093) Sheepshead minnow MODERN SPECIES 554 rap2ab (ENSCVAG00000015244) mbnl2 (ENSCVAG00000015236) ENSCVAG00000015174 ENSCVAG00000015030 #21 nrp2a (ENSCVAG00000015007) #22 abcb6a (ENSCVAG00000014976) cnppd1 (ENSCVAG00000014926) ENSCVAG00000000960 retreg2 (ENSCVAG00000014895) mdh1b (ENSCVAG00000014875) ENSCVAG00000014766 ENSCVAG00000014757 raph1b (ENSCVAG00000014733) #14 alg11 (ENSCVAG00000014672) cpb2 (ENSCVAG00000014667) zc3h13 (ENSCVAG00000014663) rpl31 (ENSCVAG00000014641) chst10 (ENSCVAG00000014623) ENSCVAG00000014603 Poeciliinae DUPLICATION Poeciliinae ANCESTRAL SPECIES 23 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b.e #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b ENSGT00940000155107.b.a Poecilia ANCESTRAL SPECIES 30 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b.e #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b ENSGT00940000155107.b.a NAME_6 ANCESTRAL SPECIES 58 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b.e #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b ENSGT00940000155107.b.a Amazon molly MODERN SPECIES 424 GPR34 (ENSPFOG00000020118) cenpl (ENSPFOG00000000981) FUNDC1 (ENSPFOG00000001039) kdm6al (ENSPFOG00000001326) ENSPFOG00000001819 ADAMTS5 (ENSPFOG00000001970) ADAMTS1 (ENSPFOG00000022859) cyyr1 (ENSPFOG00000002261) APP (ENSPFOG00000002304) atp5pf (ENSPFOG00000002501) jam2a (ENSPFOG00000002554) mrpl39 (ENSPFOG00000002698) rap2ab (ENSPFOG00000002822) mbnl2 (ENSPFOG00000002871) ENSPFOG00000003029 #21 nrp2a (ENSPFOG00000003190) #22 abcb6a (ENSPFOG00000003536) cnppd1 (ENSPFOG00000003799) ENSPFOG00000003866 retreg2 (ENSPFOG00000003980) mdh1b (ENSPFOG00000004105) ENSPFOG00000004234 ENSPFOG00000004383 raph1b (ENSPFOG00000004388) #14 alg11 (ENSPFOG00000004511) cpb2 (ENSPFOG00000004589) zc3h13 (ENSPFOG00000005039) rpl31 (ENSPFOG00000005045) chst10 (ENSPFOG00000005122) MAP4K4 (ENSPFOG00000005245) ENSPFOG00000005817 Sailfin molly MODERN SPECIES 431 nrp2a (ENSPLAG00000014628) #22 abcb6a (ENSPLAG00000014606) ENSPLAG00000014551 cnppd1 (ENSPLAG00000014321) retreg2 (ENSPLAG00000014309) mdh1b (ENSPLAG00000014290) ENSPLAG00000014235 ENSPLAG00000014230 raph1b (ENSPLAG00000014205) #14 alg11 (ENSPLAG00000014143) cpb2 (ENSPLAG00000014129) zc3h13 (ENSPLAG00000014095) chst10 (ENSPLAG00000014083) rpl31 (ENSPLAG00000000326) MAP4K4 (ENSPLAG00000013930) ENSPLAG00000009867 Guppy MODERN SPECIES 450 cenpl (ENSPREG00000009394) FUNDC1 (ENSPREG00000009446) kdm6al (ENSPREG00000009630) ENSPREG00000009738 ADAMTS5 (ENSPREG00000009792) ADAMTS1 (ENSPREG00000009832) cyyr1 (ENSPREG00000009846) appa (ENSPREG00000009858) atp5pf (ENSPREG00000009869) jam2a (ENSPREG00000009880) mrpl39 (ENSPREG00000009903) rap2ab (ENSPREG00000009930) mbnl2 (ENSPREG00000009937) ENSPREG00000009954 ENSPREG00000009986 nrp2a (ENSPREG00000010035) #22 abcb6a (ENSPREG00000010083) cnppd1 (ENSPREG00000010133) ENSPREG00000010158 retreg2 (ENSPREG00000010208) mdh1b (ENSPREG00000010234) ENSPREG00000010256 ENSPREG00000010293 raph1b (ENSPREG00000010336) #14 alg11 (ENSPREG00000010439) cpb2 (ENSPREG00000010459) zc3h13 (ENSPREG00000010526) rpl31 (ENSPREG00000010564) chst10 (ENSPREG00000010751) MAP4K4 (ENSPREG00000010791) ENSPREG00000010838 Platyfish MODERN SPECIES 16 ENSXMAG00000014363 ENSXMAG00000029865 ENSXMAG00000021851 ENSXMAG00000028265 ENSXMAG00000024120 ENSXMAG00000025620 cyyr1 (ENSXMAG00000023089) APP (ENSXMAG00000012674) atp5pf (ENSXMAG00000012670) jam2a (ENSXMAG00000012650) mrpl39 (ENSXMAG00000012643) rap2ab (ENSXMAG00000013101) mbnl2 (ENSXMAG00000012618) ENSXMAG00000023101 ENSXMAG00000012604 #21 nrp2a (ENSXMAG00000012521) #22 abcb6a (ENSXMAG00000003010) cnppd1 (ENSXMAG00000003024) ENSXMAG00000003025 retreg2 (ENSXMAG00000025935) mdh1b (ENSXMAG00000012494) ENSXMAG00000012482 ENSXMAG00000024149 raph1b (ENSXMAG00000012467) #14 alg11 (ENSXMAG00000012465) cpb2 (ENSXMAG00000012438) zc3h13 (ENSXMAG00000012423) rpl31 (ENSXMAG00000012419) chst10 (ENSXMAG00000028772) MAP4K4 (ENSXMAG00000012364) ENSXMAG00000027171 Poeciliinae ANCESTRAL SPECIES ENSGT00940000155270.i.b.f #22 Poecilia ANCESTRAL SPECIES ENSGT00940000155270.i.b.f #22 NAME_6 ANCESTRAL SPECIES ENSGT00940000155270.i.b.f #22 Sailfin molly MODERN SPECIES 901 ENSPLAG00000015907 ENSPLAG00000015870 #21 ENSPLAG00000015854 #22 Ovalentaria_B ANCESTRAL SPECIES 22 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b Cichlidae ANCESTRAL SPECIES 30 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b Pseudocrenilabrinae ANCESTRAL SPECIES 25 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Nile tilapia MODERN SPECIES 14 FUNDC1 (ENSONIG00000012115) kdm6al (ENSONIG00000012116) ENSONIG00000012142 ADAMTS5 (ENSONIG00000012151) ADAMTS1 (ENSONIG00000012152) cyyr1 (ENSONIG00000012153) APP (ENSONIG00000012154) atp5pf (ENSONIG00000037671) jam2a (ENSONIG00000031319) mrpl39 (ENSONIG00000012163) rap2ab (ENSONIG00000041504) mbnl2 (ENSONIG00000012173) ENSONIG00000012180 ENSONIG00000034440 ENSONIG00000012185 #21 nrp2a (ENSONIG00000012186) #22 abcb6a (ENSONIG00000012196) cnppd1 (ENSONIG00000040328) ENSONIG00000012200 retreg2 (ENSONIG00000038099) mdh1b (ENSONIG00000012210) ENSONIG00000012215 ENSONIG00000037064 raph1b (ENSONIG00000012220) #14 spp2 (ENSONIG00000039515) alg11 (ENSONIG00000012226) cpb2 (ENSONIG00000012227) zc3h13 (ENSONIG00000012236) rpl31 (ENSONIG00000033747) chst10 (ENSONIG00000012254) MAP4K4 (ENSONIG00000012256) Pseudocrenilabrinae_A ANCESTRAL SPECIES 29 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Haplochromini ANCESTRAL SPECIES 26 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT01020000231905 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Haplochromini_A ANCESTRAL SPECIES 29 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT01020000231905 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Haplochromini_B ANCESTRAL SPECIES 38 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT01020000231905 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160.e ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Zebra mbuna MODERN SPECIES 1105 ENSMZEG00005005364 ENSMZEG00005005388 ENSMZEG00005005395 ENSMZEG00005005415 ADAMTS5 (ENSMZEG00005005473) ADAMTS1 (ENSMZEG00005005487) cyyr1 (ENSMZEG00005005495) APP (ENSMZEG00005005527) atp5pf (ENSMZEG00005005577) jam2a (ENSMZEG00005005589) mrpl39 (ENSMZEG00005005596) rap2ab (ENSMZEG00005005602) mbnl2 (ENSMZEG00005005609) ENSMZEG00005005621 ENSMZEG00005005636 #21 nrp2a (ENSMZEG00005005655) #22 abcb6a (ENSMZEG00005005689) abcb6a (ENSMZEG00005005732) cnppd1 (ENSMZEG00005005755) ENSMZEG00005005775 retreg2 (ENSMZEG00005005803) mdh1b (ENSMZEG00005005818) ENSMZEG00005005856 ENSMZEG00005005871 raph1b (ENSMZEG00005005956) #14 spp2 (ENSMZEG00005007388) raph1b (ENSMZEG00005007411) #14 ENSMZEG00005007444 cpb2 (ENSMZEG00005007453) zc3h13 (ENSMZEG00005007473) rpl31 (ENSMZEG00005007495) Eastern happy MODERN SPECIES 14 FUNDC1 (ENSACLG00000027758) kdm6al (ENSACLG00000027762) ENSACLG00000027789 ENSACLG00000027794 ADAMTS5 (ENSACLG00000027795) ADAMTS1 (ENSACLG00000027798) cyyr1 (ENSACLG00000027800) APP (ENSACLG00000027804) atp5pf (ENSACLG00000027816) jam2a (ENSACLG00000027826) mrpl39 (ENSACLG00000027830) rap2ab (ENSACLG00000027833) mbnl2 (ENSACLG00000027836) ENSACLG00000027850 ENSACLG00000027852 #21 nrp2a (ENSACLG00000027856) #22 abcb6a (ENSACLG00000027863) abcb6a (ENSACLG00000027885) cnppd1 (ENSACLG00000027887) ENSACLG00000027888 retreg2 (ENSACLG00000027890) mdh1b (ENSACLG00000027891) ENSACLG00000027894 ENSACLG00000027896 raph1b (ENSACLG00000027897) #14 spp2 (ENSACLG00000027900) alg11 (ENSACLG00000027899) cpb2 (ENSACLG00000027901) zc3h13 (ENSACLG00000027909) rpl31 (ENSACLG00000027911) chst10 (ENSACLG00000027912) P. nyererei MODERN SPECIES 335 cenpl (ENSPNYG00000021722) FUNDC1 (ENSPNYG00000021705) kdm6al (ENSPNYG00000017996) ENSPNYG00000017067 ADAMTS5 (ENSPNYG00000017044) ADAMTS1 (ENSPNYG00000017011) cyyr1 (ENSPNYG00000016990) APP (ENSPNYG00000016921) atp5pf (ENSPNYG00000016897) jam2a (ENSPNYG00000016883) mrpl39 (ENSPNYG00000016871) rap2ab (ENSPNYG00000016763) mbnl2 (ENSPNYG00000016734) ENSPNYG00000016688 ENSPNYG00000016622 #21 nrp2a (ENSPNYG00000016558) #22 abcb6a (ENSPNYG00000016502) cnppd1 (ENSPNYG00000016487) ENSPNYG00000016453 retreg2 (ENSPNYG00000016414) mdh1b (ENSPNYG00000016342) ENSPNYG00000016302 ENSPNYG00000016292 raph1b (ENSPNYG00000016134) #14 spp2 (ENSPNYG00000016100) alg11 (ENSPNYG00000016075) cpb2 (ENSPNYG00000016049) zc3h13 (ENSPNYG00000016000) rpl31 (ENSPNYG00000015985) chst10 (ENSPNYG00000015962) MAP4K4 (ENSPNYG00000015893) Burton s mouthbrooder MODERN SPECIES 303 cenpl (ENSHBUG00000008162) kdm6al (ENSHBUG00000008121) ENSHBUG00000007893 ENSHBUG00000007866 ADAMTS5 (ENSHBUG00000007837) ADAMTS1 (ENSHBUG00000007828) cyyr1 (ENSHBUG00000007817) APP (ENSHBUG00000007800) atp5pf (ENSHBUG00000007678) jam2a (ENSHBUG00000007673) mrpl39 (ENSHBUG00000001132) rap2ab (ENSHBUG00000007655) mbnl2 (ENSHBUG00000007641) ENSHBUG00000007547 ENSHBUG00000007533 #21 nrp2a (ENSHBUG00000007507) #22 abcb6a (ENSHBUG00000007448) abcb6a (ENSHBUG00000007414) cnppd1 (ENSHBUG00000007382) ENSHBUG00000007370 retreg2 (ENSHBUG00000007360) mdh1b (ENSHBUG00000007343) ENSHBUG00000007258 ENSHBUG00000007244 raph1b (ENSHBUG00000007232) #14 spp2 (ENSHBUG00000007129) ENSHBUG00000007121 cpb2 (ENSHBUG00000007107) zc3h13 (ENSHBUG00000007100) rpl31 (ENSHBUG00000007089) chst10 (ENSHBUG00000007072) Lyretail cichlid MODERN SPECIES 422 ENSNBRG00000009034 ADAMTS5 (ENSNBRG00000008970) ADAMTS1 (ENSNBRG00000008928) APP (ENSNBRG00000008868) atp5pf (ENSNBRG00000008852) jam2a (ENSNBRG00000008806) mrpl39 (ENSNBRG00000008781) rap2ab (ENSNBRG00000008672) mbnl2 (ENSNBRG00000008611) ENSNBRG00000008569 ENSNBRG00000008405 #21 nrp2a (ENSNBRG00000008034) #22 abcb6a (ENSNBRG00000007940) abcb6a (ENSNBRG00000007882) cnppd1 (ENSNBRG00000007866) ENSNBRG00000007411 retreg2 (ENSNBRG00000007319) mdh1b (ENSNBRG00000007258) ENSNBRG00000007232 ENSNBRG00000007222 raph1b (ENSNBRG00000007182) #14 ENSNBRG00000007138 alg11 (ENSNBRG00000007121) cpb2 (ENSNBRG00000007109) ENSNBRG00000007093 rpl31 (ENSNBRG00000007076) chst10 (ENSNBRG00000007049) Midas cichlid MODERN SPECIES 353 FUNDC1 (ENSACIG00000019994) kdm6al (ENSACIG00000020006) ENSACIG00000020057 ADAMTS5 (ENSACIG00000020085) ADAMTS1 (ENSACIG00000020109) cyyr1 (ENSACIG00000020139) APP (ENSACIG00000020156) atp5pf (ENSACIG00000020186) jam2a (ENSACIG00000020203) mrpl39 (ENSACIG00000020239) rap2ab (ENSACIG00000020257) mbnl2 (ENSACIG00000020330) ENSACIG00000000161 ENSACIG00000000238 ENSACIG00000000253 #21 nrp2a (ENSACIG00000000266) #22 abcb6a (ENSACIG00000000321) cnppd1 (ENSACIG00000000528) ENSACIG00000000557 retreg2 (ENSACIG00000000674) ENSACIG00000000704 mdh1b (ENSACIG00000000744) ENSACIG00000000837 raph1b (ENSACIG00000000865) #14 spp2 (ENSACIG00000001105) alg11 (ENSACIG00000001151) cpb2 (ENSACIG00000001169) zc3h13 (ENSACIG00000001200) rpl31 (ENSACIG00000001260) chst10 (ENSACIG00000001277) MAP4K4 (ENSACIG00000001297) Pomacentridae ANCESTRAL SPECIES 124 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 Pomacentridae_A ANCESTRAL SPECIES 101 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00940000155360.B.k ENSGT00940000162479.a ENSGT00940000157849.n.c Amphiprion ANCESTRAL SPECIES 123 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00940000155360.B.k ENSGT00940000162479.a ENSGT00940000157849.n.c Orange clownfish MODERN SPECIES 16 kdm6al (ENSAPEG00000003112) ENSAPEG00000003263 ADAMTS5 (ENSAPEG00000003387) ADAMTS1 (ENSAPEG00000003424) cyyr1 (ENSAPEG00000003448) APP (ENSAPEG00000003479) atp5pf (ENSAPEG00000003584) jam2a (ENSAPEG00000003615) ENSAPEG00000003668 ENSAPEG00000003731 mrpl39 (ENSAPEG00000003747) rap2ab (ENSAPEG00000003838) mbnl2 (ENSAPEG00000003855) ENSAPEG00000003911 ENSAPEG00000003994 #21 nrp2a (ENSAPEG00000004033) #22 abcb6a (ENSAPEG00000004056) cnppd1 (ENSAPEG00000004153) ENSAPEG00000004243 retreg2 (ENSAPEG00000004582) mdh1b (ENSAPEG00000004592) ENSAPEG00000004691 ENSAPEG00000004708 raph1b (ENSAPEG00000004718) #14 spp2 (ENSAPEG00000004789) alg11 (ENSAPEG00000004804) cpb2 (ENSAPEG00000004843) zc3h13 (ENSAPEG00000004887) arhgef7b (ENSAPEG00000004982) SOX1 (ENSAPEG00000005036) ATP11A (ENSAPEG00000005069) Clown anemonefish MODERN SPECIES 879 nrp2a (ENSAOCG00000016312) #22 abcb6a (ENSAOCG00000016400) cnppd1 (ENSAOCG00000016426) ENSAOCG00000016588 retreg2 (ENSAOCG00000016649) mdh1b (ENSAOCG00000016745) ENSAOCG00000016775 ENSAOCG00000016787 ENSAOCG00000016830 #14 Spiny chromis MODERN SPECIES 805 nrp2a (ENSAPOG00000000084) #22 abcb6a (ENSAPOG00000003996) cnppd1 (ENSAPOG00000004018) ENSAPOG00000004028 retreg2 (ENSAPOG00000004043) mdh1b (ENSAPOG00000004093) ENSAPOG00000004113 ENSAPOG00000004124 raph1b (ENSAPOG00000004215) #14 ENSAPOG00000000960 alg11 (ENSAPOG00000004253) Bicolor damselfish MODERN SPECIES 486 ENSSPAG00000012476 ADAMTS5 (ENSSPAG00000012506) ADAMTS1 (ENSSPAG00000012554) cyyr1 (ENSSPAG00000012565) APP (ENSSPAG00000012605) atp5pf (ENSSPAG00000012713) jam2a (ENSSPAG00000012735) mrpl39 (ENSSPAG00000012772) rap2ab (ENSSPAG00000012796) mbnl2 (ENSSPAG00000012815) ENSSPAG00000012886 pard3ba (ENSSPAG00000012916) #21 nrp2a (ENSSPAG00000012968) #22 Percomorphaceae_C ANCESTRAL SPECIES 23 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 Eupercaria ANCESTRAL SPECIES 23 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 Tetraodontidae ANCESTRAL SPECIES 22 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00530000063873.A #17 ENSGT00940000156552.c.b #14 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b ENSGT00940000155107.b.a Fugu MODERN SPECIES 20 kdm6al (ENSTRUG00000011300) ENSTRUG00000011043 ADAMTS5 (ENSTRUG00000010983) ADAMTS1 (ENSTRUG00000010756) cyyr1 (ENSTRUG00000010751) APP (ENSTRUG00000010470) atp5pf (ENSTRUG00000027297) jam2a (ENSTRUG00000010367) mrpl39 (ENSTRUG00000010315) rap2ab (ENSTRUG00000021439) mbnl2 (ENSTRUG00000010220) ENSTRUG00000010079 ENSTRUG00000029602 ENSTRUG00000033281 ENSTRUG00000009883 #21 nrp2a (ENSTRUG00000009236) #22 abcb6a (ENSTRUG00000009019) cnppd1 (ENSTRUG00000008996) ENSTRUG00000008850 retreg2 (ENSTRUG00000020062) ENSTRUG00000027970 ENSTRUG00000021914 mdh1b (ENSTRUG00000008621) ENSTRUG00000019725 cd28 (ENSTRUG00000008513) #17 raph1b (ENSTRUG00000008306) #14 alg11 (ENSTRUG00000008200) cpb2 (ENSTRUG00000007671) ENSTRUG00000030462 rpl31 (ENSTRUG00000007359) chst10 (ENSTRUG00000007251) Tetraodon MODERN SPECIES 18 caskb (ENSTNIG00000014545) cenpl (ENSTNIG00000014543) FUNDC1 (ENSTNIG00000014542) ENSTNIG00000000999 kdm6al (ENSTNIG00000014541) ENSTNIG00000014540 ADAMTS5 (ENSTNIG00000014539) ADAMTS1 (ENSTNIG00000014538) APP (ENSTNIG00000014537) atp5pf (ENSTNIG00000014536) jam2a (ENSTNIG00000000490) mrpl39 (ENSTNIG00000014535) rap2ab (ENSTNIG00000014534) mbnl2 (ENSTNIG00000014533) ENSTNIG00000014532 #21 nrp2a (ENSTNIG00000014531) #22 abcb6a (ENSTNIG00000014530) ENSTNIG00000002465 ENSTNIG00000014529 retreg2 (ENSTNIG00000014528) mdh1b (ENSTNIG00000000378) ENSTNIG00000014527 raph1b (ENSTNIG00000014526) #14 alg11 (ENSTNIG00000014525) cpb2 (ENSTNIG00000014524) zc3h13 (ENSTNIG00000014523) rpl31 (ENSTNIG00000014522) chst10 (ENSTNIG00000014521) ENSTNIG00000014520 ENSTNIG00000014519 RDX (ENSTNIG00000014518) Eupecaria_A ANCESTRAL SPECIES 23 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 Ballan wrasse MODERN SPECIES 521 nrp2a (ENSLBEG00000024837) #22 ENSLBEG00000024867 abcb6a (ENSLBEG00000024911) cnppd1 (ENSLBEG00000024992) ENSLBEG00000025132 retreg2 (ENSLBEG00000025269) mdh1b (ENSLBEG00000025294) ENSLBEG00000025329 ENSLBEG00000025355 raph1b (ENSLBEG00000025383) #14 alg11 (ENSLBEG00000025430) cpb2 (ENSLBEG00000025445) ENSLBEG00000025471 ENSLBEG00000025496 rpl31 (ENSLBEG00000025520) chst10 (ENSLBEG00000025530) Eupecaria_B ANCESTRAL SPECIES 23 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 Eupecaria_C ANCESTRAL SPECIES 27 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Eupercaria_incertae_sedis ANCESTRAL SPECIES 31 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 European seabass MODERN SPECIES 15 ENSDLAG00005029710 ENSDLAG00005024220 ENSDLAG00005005746 ENSDLAG00005030864 ENSDLAG00005007858 ADAMTS5 (ENSDLAG00005031926) ENSDLAG00005008994 APP (ENSDLAG00005009169) jam2a (ENSDLAG00005015261) mrpl39 (ENSDLAG00005015269) ENSDLAG00005027520 ENSDLAG00005015405 ENSDLAG00005015455 ENSDLAG00005015507 #21 ENSDLAG00005034257 ENSDLAG00005015590 #22 ENSDLAG00005017020 abcb6a (ENSDLAG00005017043) cnppd1 (ENSDLAG00005017316) ENSDLAG00005017447 retreg2 (ENSDLAG00005026804) mdh1b (ENSDLAG00005017625) ENSDLAG00005017672 raph1b (ENSDLAG00005017704) #14 spp2 (ENSDLAG00005026585) alg11 (ENSDLAG00005018603) cpb2 (ENSDLAG00005018614) zc3h13 (ENSDLAG00005018626) ENSDLAG00005018637 ENSDLAG00005032912 ENSDLAG00005018949 Large yellow croaker MODERN SPECIES 486 FUNDC1 (ENSLCRG00005007111) kdm6al (ENSLCRG00005007211) ENSLCRG00005021804 ADAMTS5 (ENSLCRG00005021805) ADAMTS1 (ENSLCRG00005021806) cyyr1 (ENSLCRG00005021808) APP (ENSLCRG00005021835) atp5pf (ENSLCRG00005023036) jam2a (ENSLCRG00005023038) mrpl39 (ENSLCRG00005023039) rap2ab (ENSLCRG00005023040) mbnl2 (ENSLCRG00005023043) ENSLCRG00005023044 pard3ba (ENSLCRG00005023046) #21 ENSLCRG00005010605 nrp2a (ENSLCRG00005010619) #22 abcb6a (ENSLCRG00005012185) cnppd1 (ENSLCRG00005012371) ENSLCRG00005012462 retreg2 (ENSLCRG00005013249) mdh1b (ENSLCRG00005013252) ENSLCRG00005013256 ENSLCRG00005013258 raph1b (ENSLCRG00005013261) #14 spp2 (ENSLCRG00005013265) alg11 (ENSLCRG00005013267) cpb2 (ENSLCRG00005013268) zc3h13 (ENSLCRG00005013271) rpl31 (ENSLCRG00005013274) chst10 (ENSLCRG00005013277) MAP4K4 (ENSLCRG00005013293) Gilthead seabream MODERN SPECIES 16 cenpl (ENSSAUG00010026846) FUNDC1 (ENSSAUG00010026840) kdm6al (ENSSAUG00010020185) ENSSAUG00010019785 ADAMTS5 (ENSSAUG00010019771) ENSSAUG00010019769 ADAMTS1 (ENSSAUG00010019766) APP (ENSSAUG00010017291) ATP5J (ENSSAUG00010017260) jam2a (ENSSAUG00010017256) mrpl39 (ENSSAUG00010017242) rap2ab (ENSSAUG00010017238) mbnl2 (ENSSAUG00010017204) ENSSAUG00010017201 ENSSAUG00010017193 #21 nrp2a (ENSSAUG00010016327) #22 abcb6a (ENSSAUG00010016287) cnppd1 (ENSSAUG00010016285) ENSSAUG00010015871 retreg2 (ENSSAUG00010015858) mdh1b (ENSSAUG00010015856) ENSSAUG00010015853 ENSSAUG00010015850 raph1b (ENSSAUG00010015668) #14 spp2 (ENSSAUG00010015659) alg11 (ENSSAUG00010015656) cpb2 (ENSSAUG00010015649) zc3h13 (ENSSAUG00010015648) rpl31 (ENSSAUG00010015646) MAP4K4 (ENSSAUG00010013987) ENSSAUG00010013896 Perciformes ANCESTRAL SPECIES 24 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 Cottioidei ANCESTRAL SPECIES 24 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 ENSGT00950000183030 Lumpfish MODERN SPECIES 11 cenpl (ENSCLMG00005004545) FUNDC1 (ENSCLMG00005004563) kdm6al (ENSCLMG00005004832) ADAMTS5 (ENSCLMG00005007241) ADAMTS1 (ENSCLMG00005007244) cyyr1 (ENSCLMG00005007245) APP (ENSCLMG00005007306) atp5pf (ENSCLMG00005014632) jam2a (ENSCLMG00005014633) mrpl39 (ENSCLMG00005014634) rap2ab (ENSCLMG00005014674) mbnl2 (ENSCLMG00005014677) ENSCLMG00005014689 ENSCLMG00005014691 ENSCLMG00005014693 #21 nrp2a (ENSCLMG00005014713) #22 abcb6a (ENSCLMG00005015690) ENSCLMG00005017216 ENSCLMG00005017219 ENSCLMG00005017235 arhgef7b (ENSCLMG00005017440) SOX1 (ENSCLMG00005019072) ATP11A (ENSCLMG00005000052) tubgcp3 (ENSCLMG00005000524) ENSCLMG00005000536 rcbtb1 (ENSCLMG00005000540) cdadc1 (ENSCLMG00005000549) cab39l (ENSCLMG00005000599) MCF2L (ENSCLMG00005000628) ENSCLMG00005000777 RDX (ENSCLMG00005000795) Stickleback MODERN SPECIES kdm6al (ENSGACG00000015068) ENSGACG00000015070 ADAMTS5 (ENSGACG00000015075) ADAMTS1 (ENSGACG00000015076) cyyr1 (ENSGACG00000015079) APP (ENSGACG00000015081) atp5pf (ENSGACG00000015085) jam2a (ENSGACG00000015087) mrpl39 (ENSGACG00000015089) rap2ab (ENSGACG00000015103) mbnl2 (ENSGACG00000015105) ENSGACG00000015107 ENSGACG00000015115 ENSGACG00000015116 #21 ENSGACG00000015120 nrp2a (ENSGACG00000015122) #22 abcb6a (ENSGACG00000015126) cnppd1 (ENSGACG00000015132) ENSGACG00000015135 retreg2 (ENSGACG00000015143) mdh1b (ENSGACG00000015146) ENSGACG00000015149 ENSGACG00000015151 raph1b (ENSGACG00000015152) #14 spp2 (ENSGACG00000015156) alg11 (ENSGACG00000015159) cpb2 (ENSGACG00000015162) zc3h13 (ENSGACG00000015166) rpl31 (ENSGACG00000015169) chst10 (ENSGACG00000015172) MAP4K4 (ENSGACG00000015177) Perciformes_a ANCESTRAL SPECIES 25 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b Channel bull blenny MODERN SPECIES 11 cenpl (ENSCGOG00000024535) FUNDC1 (ENSCGOG00000024533) kdm6al (ENSCGOG00000024312) ENSCGOG00000024155 ADAMTS5 (ENSCGOG00000024136) ADAMTS1 (ENSCGOG00000024135) cyyr1 (ENSCGOG00000024134) APP (ENSCGOG00000023662) atp5pf (ENSCGOG00000023612) jam2a (ENSCGOG00000023606) mrpl39 (ENSCGOG00000023584) rap2ab (ENSCGOG00000023575) mbnl2 (ENSCGOG00000023566) ENSCGOG00000023559 ENSCGOG00000023549 #21 nrp2a (ENSCGOG00000023135) #22 abcb6a (ENSCGOG00000022961) cnppd1 (ENSCGOG00000022956) ENSCGOG00000022953 retreg2 (ENSCGOG00000022949) mdh1b (ENSCGOG00000022940) ENSCGOG00000022938 ENSCGOG00000022937 raph1b (ENSCGOG00000022764) #14 spp2 (ENSCGOG00000022749) alg11 (ENSCGOG00000022747) cpb2 (ENSCGOG00000022743) rpl31 (ENSCGOG00000022725) chst10 (ENSCGOG00000022724) ENSCGOG00000017296 ENSCGOG00000017118 Pike perch MODERN SPECIES 9 kdm6al (ENSSLUG00000016683) ENSSLUG00000015186 ADAMTS5 (ENSSLUG00000014994) ADAMTS1 (ENSSLUG00000014970) cyyr1 (ENSSLUG00000014965) APP (ENSSLUG00000008660) atp5pf (ENSSLUG00000008261) ENSSLUG00000008250 jam2a (ENSSLUG00000008239) mrpl39 (ENSSLUG00000008097) rap2ab (ENSSLUG00000008078) mbnl2 (ENSSLUG00000008025) ENSSLUG00000007988 ENSSLUG00000007984 pard3ba (ENSSLUG00000007966) #21 nrp2a (ENSSLUG00000005645) #22 abcb6a (ENSSLUG00000005199) cnppd1 (ENSSLUG00000005142) ENSSLUG00000005088 retreg2 (ENSSLUG00000023431) mdh1b (ENSSLUG00000023427) ENSSLUG00000023420 ENSSLUG00000023416 ENSSLUG00000023414 raph1b (ENSSLUG00000023307) #14 spp2 (ENSSLUG00000023287) alg11 (ENSSLUG00000023283) cpb2 (ENSSLUG00000023268) ENSSLUG00000023259 rpl31 (ENSSLUG00000023256) chst10 (ENSSLUG00000023251) Percomorphaceae_D ANCESTRAL SPECIES 23 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 Anabantaria ANCESTRAL SPECIES 23 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b Zig-zag eel MODERN SPECIES 11 ENSMAMG00000022082 ENSMAMG00000022092 ENSMAMG00000028432 ENSMAMG00000022115 ENSMAMG00000022119 ENSMAMG00000022130 cyyr1 (ENSMAMG00000022132) APP (ENSMAMG00000022137) atp5pf (ENSMAMG00000022160) jam2a (ENSMAMG00000022163) mrpl39 (ENSMAMG00000022169) ENSMAMG00000022170 ENSMAMG00000022173 ENSMAMG00000022183 ENSMAMG00000022187 #21 ENSMAMG00000022194 #22 abcb6a (ENSMAMG00000022210) cnppd1 (ENSMAMG00000022216) ENSMAMG00000022222 retreg2 (ENSMAMG00000022232) mdh1b (ENSMAMG00000022235) ENSMAMG00000022239 ENSMAMG00000022240 raph1b (ENSMAMG00000022248) #14 spp2 (ENSMAMG00000022266) alg11 (ENSMAMG00000022268) cpb2 (ENSMAMG00000022271) zc3h13 (ENSMAMG00000022274) ENSMAMG00000022284 mrps9 (ENSMAMG00000022287) ENSMAMG00000022291 Anabantoidei ANCESTRAL SPECIES 23 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b Climbing perch MODERN SPECIES 11 ENSATEG00000027083 ENSATEG00000002431 ENSATEG00000002437 ENSATEG00000002594 ADAMTS5 (ENSATEG00000002612) ADAMTS1 (ENSATEG00000002657) cyyr1 (ENSATEG00000026837) APP (ENSATEG00000002720) atp5pf (ENSATEG00000029666) jam2a (ENSATEG00000028214) mrpl39 (ENSATEG00000002815) ENSATEG00000002914 ENSATEG00000002926 ENSATEG00000003002 ENSATEG00000003057 #21 ENSATEG00000003091 #22 abcb6a (ENSATEG00000003125) cnppd1 (ENSATEG00000027513) ENSATEG00000003266 retreg2 (ENSATEG00000003440) mdh1b (ENSATEG00000003523) ENSATEG00000003650 ENSATEG00000003664 raph1b (ENSATEG00000003709) #14 spp2 (ENSATEG00000003777) alg11 (ENSATEG00000003821) cpb2 (ENSATEG00000003852) zc3h13 (ENSATEG00000003937) ENSATEG00000003942 ENSATEG00000029382 ENSATEG00000003973 Siamese fighting fish MODERN SPECIES 10 ENSBSLG00000000989 ENSBSLG00000001194 ENSBSLG00000001214 ENSBSLG00000001255 ADAMTS5 (ENSBSLG00000001313) ADAMTS1 (ENSBSLG00000001319) cyyr1 (ENSBSLG00000001324) APP (ENSBSLG00000001758) atp5pf (ENSBSLG00000002089) jam2a (ENSBSLG00000002091) mrpl39 (ENSBSLG00000002094) rap2ab (ENSBSLG00000002096) ENSBSLG00000002097 mbnl2 (ENSBSLG00000002098) pard3ba (ENSBSLG00000002100) #21 ENSBSLG00000002117 #22 abcb6a (ENSBSLG00000003121) cnppd1 (ENSBSLG00000003184) ENSBSLG00000003198 retreg2 (ENSBSLG00000003229) mdh1b (ENSBSLG00000003231) ENSBSLG00000003233 ENSBSLG00000003239 mdh1b (ENSBSLG00000003242) ENSBSLG00000003247 ENSBSLG00000003260 spp2 (ENSBSLG00000003287) alg11 (ENSBSLG00000003291) zc3h13 (ENSBSLG00000003293) rpl31 (ENSBSLG00000003300) chst10 (ENSBSLG00000003307) Carangaria ANCESTRAL SPECIES 23 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 Carangaria_A ANCESTRAL SPECIES 23 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 Seriola ANCESTRAL SPECIES 126 ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 ENSGT00950000183030.j Greater amberjack MODERN SPECIES 246 jam2a (ENSSDUG00000021520) atp5pf (ENSSDUG00000021530) mrpl39 (ENSSDUG00000021539) rap2ab (ENSSDUG00000021548) mbnl2 (ENSSDUG00000021551) ENSSDUG00000021568 ENSSDUG00000021584 #21 nrp2a (ENSSDUG00000021601) #22 abcb6a (ENSSDUG00000021632) cnppd1 (ENSSDUG00000021656) ENSSDUG00000021661 retreg2 (ENSSDUG00000021672) mdh1b (ENSSDUG00000021689) ENSSDUG00000021702 ENSSDUG00000021713 raph1b (ENSSDUG00000021717) #14 ENSSDUG00000021755 alg11 (ENSSDUG00000021786) cpb2 (ENSSDUG00000021792) zc3h13 (ENSSDUG00000021808) rpl31 (ENSSDUG00000021821) chst10 (ENSSDUG00000021826) MAP4K4 (ENSSDUG00000021842) Yellowtail amberjack MODERN SPECIES 3221 chn1 (ENSSLDG00000013541) ENSSLDG00000013526 FARP1 (ENSSLDG00000013411) ggact.3 (ENSSLDG00000013514) arl13b (ENSSLDG00000013361) NCAM2 (ENSSLDG00000013314) gart (ENSSLDG00000013225) n6amt1 (ENSSLDG00000013280) atp5pf (ENSSLDG00000013207) jam2a (ENSSLDG00000013189) mrpl39 (ENSSLDG00000013175) rap2ab (ENSSLDG00000013167) mbnl2 (ENSSLDG00000013155) ENSSLDG00000013129 ENSSLDG00000013100 #21 nrp2a (ENSSLDG00000013049) #22 abcb6a (ENSSLDG00000012975) cnppd1 (ENSSLDG00000012942) ENSSLDG00000012921 retreg2 (ENSSLDG00000012892) mdh1b (ENSSLDG00000012802) ENSSLDG00000012753 ENSSLDG00000012772 raph1b (ENSSLDG00000012713) #14 spp2 (ENSSLDG00000012693) alg11 (ENSSLDG00000012678) cpb2 (ENSSLDG00000012664) ENSSLDG00000012646 ENSSLDG00000012610 chst10 (ENSSLDG00000012582) rpl31 (ENSSLDG00000012384) Barramundi perch MODERN SPECIES 157 cenpl (ENSLCAG00010024471) FUNDC1 (ENSLCAG00010024476) kdm6al (ENSLCAG00010025784) ENSLCAG00010026926 ADAMTS5 (ENSLCAG00010026928) ADAMTS1 (ENSLCAG00010026929) cyyr1 (ENSLCAG00010026931) APP (ENSLCAG00010026969) atp5pf (ENSLCAG00010027040) jam2a (ENSLCAG00010027041) mrpl39 (ENSLCAG00010027043) rap2ab (ENSLCAG00010027045) mbnl2 (ENSLCAG00010027049) ENSLCAG00010027052 ENSLCAG00010027054 #21 nrp2a (ENSLCAG00010027064) #22 ENSLCAG00010027080 abcb6a (ENSLCAG00010027087) cnppd1 (ENSLCAG00010027105) ENSLCAG00010027107 retreg2 (ENSLCAG00010027109) mdh1b (ENSLCAG00010027110) ENSLCAG00010027111 ENSLCAG00010027112 raph1b (ENSLCAG00010027114) #14 spp2 (ENSLCAG00010027126) alg11 (ENSLCAG00010027128) cpb2 (ENSLCAG00010027135) rpl31 (ENSLCAG00010027148) chst10 (ENSLCAG00010027159) MAP4K4 (ENSLCAG00010027240) Pleuronectoidei ANCESTRAL SPECIES 42 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #21 ENSGT00940000155270.i.b #22 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00990000203779 ENSGT00940000156552.c.b #14 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b Turbot MODERN SPECIES ENSSMAG00000005546 ENSSMAG00000037945 ENSSMAG00000005559 ENSSMAG00000005721 ADAMTS5 (ENSSMAG00000005793) ADAMTS1 (ENSSMAG00000005814) cyyr1 (ENSSMAG00000035670) APP (ENSSMAG00000005840) atp5pf (ENSSMAG00000036307) jam2a (ENSSMAG00000006003) mrpl39 (ENSSMAG00000006033) ENSSMAG00000006055 ENSSMAG00000006063 ENSSMAG00000006156 ENSSMAG00000006175 #21 ENSSMAG00000006232 #22 abcb6a (ENSSMAG00000006353) cnppd1 (ENSSMAG00000036984) ENSSMAG00000006464 retreg2 (ENSSMAG00000006969) mdh1b (ENSSMAG00000006973) ENSSMAG00000006986 ENSSMAG00000006998 raph1b (ENSSMAG00000007021) #14 spp2 (ENSSMAG00000028508) alg11 (ENSSMAG00000007070) cpb2 (ENSSMAG00000007082) zc3h13 (ENSSMAG00000007110) ENSSMAG00000007130 ENSSMAG00000025555 ENSSMAG00000007176 Tongue sole MODERN SPECIES 5 chst10 (ENSCSEG00000010162) rpl31 (ENSCSEG00000010181) zc3h13 (ENSCSEG00000010275) cpb2 (ENSCSEG00000010303) alg11 (ENSCSEG00000010341) raph1b (ENSCSEG00000010351) #14 raph1b (ENSCSEG00000010358) #14 cd28 (ENSCSEG00000010375) ENSCSEG00000010396 mdh1b (ENSCSEG00000010427) retreg2 (ENSCSEG00000010438) ENSCSEG00000010452 cnppd1 (ENSCSEG00000010476) abcb6a (ENSCSEG00000010487) pard3ba (ENSCSEG00000010523) #21 nrp2a (ENSCSEG00000010558) #22 ENSCSEG00000010808 mbnl2 (ENSCSEG00000010815) ENSCSEG00000010847 mrpl39 (ENSCSEG00000010854) jam2a (ENSCSEG00000010875) atp5pf (ENSCSEG00000010884) ZSWIM6 (ENSCSEG00000010893) si:ch73-234b20.5 (ENSCSEG00000010922) hnrnpd (ENSCSEG00000010909) enoph1 (ENSCSEG00000010924) sec31a (ENSCSEG00000010931) lin54 (ENSCSEG00000011040) cops4 (ENSCSEG00000011083) plac8.1 (ENSCSEG00000011107) ADAMTS6 (ENSCSEG00000011127) Pinecone sodierfish MODERN SPECIES 11 FUNDC1 (ENSMMDG00005022220) kdm6al (ENSMMDG00005022160) ENSMMDG00005022155 ADAMTS5 (ENSMMDG00005022150) ADAMTS1 (ENSMMDG00005022147) cyyr1 (ENSMMDG00005022146) APP (ENSMMDG00005021851) atp5pf (ENSMMDG00005021842) jam2a (ENSMMDG00005021838) mrpl39 (ENSMMDG00005021836) rap2ab (ENSMMDG00005021834) mbnl2 (ENSMMDG00005021786) ENSMMDG00005021776 ENSMMDG00005021774 ENSMMDG00005021773 #21 nrp2a (ENSMMDG00005021768) #22 abcb6a (ENSMMDG00005021717) cnppd1 (ENSMMDG00005021702) ENSMMDG00005021587 retreg2 (ENSMMDG00005021581) mdh1b (ENSMMDG00005021579) ENSMMDG00005021577 ENSMMDG00005021573 raph1b (ENSMMDG00005021460) #14 spp2 (ENSMMDG00005021455) cpb2 (ENSMMDG00005021453) alg11 (ENSMMDG00005021449) cpb2 (ENSMMDG00005021445) zc3h13 (ENSMMDG00005021439) RPL31 (ENSMMDG00005021436) chst10 (ENSMMDG00005021433) Clupeocephala ANCESTRAL SPECIES ENSGT00940000155270.j #22 Otomorpha ANCESTRAL SPECIES 316 ENSGT00940000155002.b.f ENSGT00390000018381 ENSGT00940000158085.a ENSGT00940000161191.A.b ENSGT01090000260098.B.a ENSGT00940000154453.a.b.b.f ENSGT00940000156952.a.b ENSGT00940000155408.p ENSGT00950000183214.a.a.a.a ##21 ENSGT00940000155270.j #22 ENSGT01090000259987.a.b.d.b.a ENSGT00940000155003.f ENSGT00390000018475 ENSGT00940000157755.q ENSGT00390000014100.k.a ENSGT00940000153141.B.b ENSGT00940000156387 ENSGT00940000156056.B.c.a ENSGT00950000182910.a.b.a ENSGT00390000006307 ENSGT00390000011144 ENSGT01100000263491.a.b.a.a.b.b.a Clupeiformes ANCESTRAL SPECIES 410 ENSGT00940000155002.b.f ENSGT00390000018381 ENSGT00940000158085.a ENSGT00940000161191.A.b ENSGT00940000154453.a.b.b.f ENSGT00940000156952.a.b ENSGT00940000156952.b ENSGT00950000183214.a.a.a.a ##21 ENSGT00940000155270.j #22 ENSGT01090000259987.a.b.d.b.a ENSGT00940000155003.f Denticle herring MODERN SPECIES 14 ENSDCDG00000031456 ENSDCDG00000031455 ENSDCDG00000031454 ENSDCDG00000031452 ENSDCDG00000031450 arhgap12a (ENSDCDG00000031091) KIF5B (ENSDCDG00000030549) PFKP (ENSDCDG00000029323) pitrm1 (ENSDCDG00000029261) ENSDCDG00000029258 fzd8b (ENSDCDG00000029257) ENSDCDG00000029254 ENSDCDG00000029253 ENSDCDG00000029251 pard3ab (ENSDCDG00000028464) ##21 nrp1b (ENSDCDG00000028416) #22 itgb1b (ENSDCDG00000022976) epc1b (ENSDCDG00000022569) WDR37 (ENSDCDG00000022323) gtpbp4 (ENSDCDG00000021971) LARP4B (ENSDCDG00000021965) ENSDCDG00000021925 ENSDCDG00000018236 ENSDCDG00000018195 ENSDCDG00000018184 ENSDCDG00000018163 ENSDCDG00000018156 ENSDCDG00000018151 plcd1b (ENSDCDG00000017986) oxsr1a (ENSDCDG00000017825) ENSDCDG00000017808 Otophysi ANCESTRAL SPECIES 136 ENSGT00940000154095.b.a.a.a ENSGT00940000156086.c ENSGT00940000158089.a ENSGT00940000160025 ENSGT00940000155469 ENSGT00990000203757 ENSGT00940000158742 ENSGT00390000002143.a ENSGT00940000159042 ENSGT00530000064699 ENSGT00940000159760 ENSGT00940000158506 ENSGT00940000156952.a.b ENSGT00940000155408.p ENSGT00950000183214.a.a.a.a ##21 ENSGT00940000155270.j #22 ENSGT01090000259987.a.b.d.b.a.k ENSGT01090000259987.a.b.d.b.a.l ENSGT00940000155003.f ENSGT00940000165563.b ENSGT00940000154801.m.b ENSGT00950000182860.a.a.b.a.a.a.b ENSGT00950000183208.B.f.b ENSGT00940000159520.h ENSGT00940000155795.e ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A Cyprinoidei ANCESTRAL SPECIES 92 ENSGT00940000155469 ENSGT01090000260029.a.b.b.a.b ENSGT01100000263491.a.b.a.a.b.b.a ENSGT00990000203757 ENSGT00940000158742 ENSGT00390000002143.a ENSGT00940000159042 ENSGT00530000064699 ENSGT00940000159760 ENSGT00940000158506 ENSGT00940000156952.a.b ENSGT00940000155408.p ENSGT00950000183214.a.a.a.a ##21 ENSGT00940000155270.j #22 ENSGT01090000259987.a.b.d.b.a.k ENSGT01090000259987.a.b.d.b.a.l ENSGT00940000155003.f ENSGT00940000165563.b ENSGT00940000154801.m.b ENSGT01090000260029.a.b.b.a.a.a.b ENSGT00950000182860.a.a.b.a.a.a.b ENSGT00950000183208.B.f.b ENSGT00940000159520.h.k.a.b.b ENSGT00940000155795.e ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 489 ENSGT00390000001710.e.b ENSGT00940000154095.b.a.a.a.c ENSGT00940000156086.c.g ENSGT00950000182997.b.b ENSGT00940000160025.a ENSGT00940000155469.yb ENSGT01090000260029.a.b.b.a.a.a.a.a.a.a ENSGT00990000203757.d ENSGT00940000158742.f.b ENSGT00390000002143.a.k.b ENSGT00940000159760.c ENSGT00940000158506.h ENSGT01090000260029.a.b.b.a.a.a.b.a.b ENSGT00940000155408.p.b ENSGT00950000183214.a.a.a.a.c ##21 ENSGT00940000155270.j.a #22 ENSGT01090000259987.a.b.d.b.a.k.c ENSGT01090000259987.a.b.d.b.a.l.a ENSGT00940000155003.f.b Goldfish DUPLICATION Goldfish MODERN SPECIES 11 cacybp (ENSCARG00000017497) tnn (ENSCARG00000017442) KIAA0040 (ENSCARG00000017422) tnr (ENSCARG00000016934) ENSCARG00000016883 ZNF622 (ENSCARG00000016870) acvr1l (ENSCARG00000016849) otomp (ENSCARG00000016825) SVIL (ENSCARG00000013341) ENSCARG00000013228 gpc1b (ENSCARG00000013194) otomp (ENSCARG00000013173) acvr1l (ENSCARG00000013161) ZNF622 (ENSCARG00000013151) ENSCARG00000013143 nrp1b (ENSCARG00000013091) #22 ITGB1 (ENSCARG00000012932) KIF5B (ENSCARG00000012344) epc1b (ENSCARG00000012011) ENSCARG00000012240 arhgap12a (ENSCARG00000011963) ZEB1 (ENSCARG00000011938) ENSCARG00000011924 ENSCARG00000011910 kirrel1b (ENSCARG00000011824) cadm3 (ENSCARG00000011754) sdhc (ENSCARG00000011699) atp1a2a (ENSCARG00000009083) mpz (ENSCARG00000008937) lig1 (ENSCARG00000008435) zgc:152670 (ENSCARG00000008389) Goldfish MODERN SPECIES 11 acsl3b (ENSCARG00000003253) pax3a (ENSCARG00000003368) ENSCARG00000003393 ENSCARG00000003401 gna11b (ENSCARG00000003413) chico (ENSCARG00000003418) PLPP2 (ENSCARG00000003426) tle2c (ENSCARG00000003432) efr3a (ENSCARG00000003446) ENSCARG00000003453 KCNQ3 (ENSCARG00000003466) ENSCARG00000003547 ENSCARG00000003568 ENSCARG00000003600 pard3ab (ENSCARG00000003637) ##21 nrp1b (ENSCARG00000003966) #22 ITGB1 (ENSCARG00000004165) ITGB1 (ENSCARG00000004851) epc1b (ENSCARG00000004918) KIF5B (ENSCARG00000004977) eeig2a (ENSCARG00000005008) prpf38b (ENSCARG00000005019) ENSCARG00000005037 ENSCARG00000005068 ENSCARG00000005184 ENSCARG00000005195 WDR47 (ENSCARG00000005203) CAMSAP2 (ENSCARG00000005215) ccl20a.3 (ENSCARG00000005240) ENSCARG00000005250 ENSCARG00000005255 Cyprininae_a ANCESTRAL SPECIES 436 ENSGT00990000203757.d ENSGT00940000158742.f.b ENSGT00390000002143.a.k.b ENSGT00940000159760.c ENSGT00940000158506.h ENSGT01090000260029.a.b.b.a.a.a.b.a.b ENSGT00940000155408.p.b ENSGT00950000183214.a.a.a.a.c ##21 ENSGT00940000155270.j.a #22 ENSGT01090000259987.a.b.d.b.a.k.c ENSGT01090000259987.a.b.d.b.a.l.a ENSGT00940000155003.f.b ENSGT00940000159520.h.k.a.a.a.a.a ENSGT00940000154801.m.b.b ENSGT01090000260029.a.b.b.a.a.a.b.b.a.a ENSGT01090000260029.a.b.b.a.a.a.b.a.a ENSGT00950000182860.a.a.b.a.a.a.b.a ENSGT00950000183208.B.f.b.q ENSGT00940000159520.h.k.a.b.b.a ENSGT00730000111912.B.f.a Common carp reference MODERN SPECIES 21 ENSCCRG00000016919 ENSCCRG00000077317 ENSCCRG00000029586 ENSCCRG00000029609 ENSCCRG00000075882 ENSCCRG00000037325 basp1 (ENSCCRG00000057170) adcy8 (ENSCCRG00000033949) efr3a (ENSCCRG00000039555) ENSCCRG00000041104 dnaaf11 (ENSCCRG00000037362) ENSCCRG00000037354 ENSCCRG00000037345 pard3ab (ENSCCRG00000032744) ##21 ENSCCRG00000068507 nrp1b (ENSCCRG00000049850) #22 ENSCCRG00000045265 epc1b (ENSCCRG00000011359) ENSCCRG00000011362 ENSCCRG00000062670 ENSCCRG00000029733 arhgap12a (ENSCCRG00000039878) ENSCCRG00000039841 ENSCCRG00000037813 ENSCCRG00000056035 kirrel1b (ENSCCRG00000031697) cadm3 (ENSCCRG00000017976) sdhc (ENSCCRG00000048761) atp1a2a (ENSCCRG00000060672) mpz (ENSCCRG00000066643) lig1 (ENSCCRG00000044155) Golden-line barbel MODERN SPECIES 619 basp1 (ENSSGRG00000040186) adcy8 (ENSSGRG00000039315) KCNQ3 (ENSSGRG00000038512) dnaaf11 (ENSSGRG00000038510) ENSSGRG00000038479 ENSSGRG00000038473 pard3ab (ENSSGRG00000036714) ##21 nrp1b (ENSSGRG00000036633) #22 ITGB1 (ENSSGRG00000036631) ENSSGRG00000036626 epc1b (ENSSGRG00000036624) ENSSGRG00000036622 ENSSGRG00000036620 ENSSGRG00000036618 KIF5B (ENSSGRG00000036301) ENSSGRG00000036142 ENSSGRG00000036139 arhgap12a (ENSSGRG00000035351) ZEB1 (ENSSGRG00000035334) ENSSGRG00000035331 ENSSGRG00000035330 Cyprininae ANCESTRAL SPECIES 72 ENSGT00940000156086.c.h ENSGT00950000182997.b.a ENSGT00940000160025.b ENSGT00940000155469.`c ENSGT01090000260029.a.b.b.a.b.b.b ENSGT00990000203757.c ENSGT00940000158742.f.a ENSGT00390000002143.a.k.a ENSGT00940000159042 ENSGT00530000064699 ENSGT00940000159760.d ENSGT00940000158506.g ENSGT00940000156952.a.b.b ENSGT00940000155408.p.a ENSGT00950000183214.a.a.a.a.d ##21 ENSGT00940000155270.j.b #22 ENSGT01090000259987.a.b.d.b.a.k.d ENSGT01090000259987.a.b.d.b.a.l.b ENSGT00940000155003.f.a ENSGT00940000159520.h.k.a.a.a.b.a.a ENSGT00940000159520.h.k.a.a.b ENSGT00940000165563.b ENSGT00940000154801.m.b.a ENSGT00950000182860.a.a.b.a.a.a.b.b ENSGT00950000183208.B.f.b.r ENSGT00940000159520.h.k.a.b.a ENSGT00940000155795.e.e ENSGT00940000159779.a ENSGT00390000000566.eb ENSGT00940000159936.b ENSGT01030000234556.a.b.b.d Goldfish DUPLICATION Goldfish MODERN SPECIES 19 ENSCARG00000014403 dnajc4 (ENSCARG00000014396) eif1ad (ENSCARG00000014392) ENSCARG00000014389 nrg2b (ENSCARG00000014379) eef2b (ENSCARG00000014194) ENSCARG00000014176 ARMC6 (ENSCARG00000014170) slc25a42 (ENSCARG00000014140) ENSCARG00000014121 ENSCARG00000014105 sbno2a (ENSCARG00000014032) CREM (ENSCARG00000013979) ENSCARG00000014006 pard3ab (ENSCARG00000013691) ##21 nrp1b (ENSCARG00000013594) #22 ITGB1 (ENSCARG00000009391) ITGB1 (ENSCARG00000009116) epc1b (ENSCARG00000008742) ENSCARG00000008718 ENSCARG00000008703 ENSCARG00000008691 KIF5B (ENSCARG00000008396) arhgap12a (ENSCARG00000007193) ZEB1 (ENSCARG00000007113) ENSCARG00000007095 kirrel1b (ENSCARG00000006933) cadm3 (ENSCARG00000006866) sdhc (ENSCARG00000006841) atp1a2a (ENSCARG00000006714) mpz (ENSCARG00000006555) Goldfish MODERN SPECIES 19 mterf4 (ENSCARG00000003964) ENSCARG00000003986 ENSCARG00000004025 epc1b (ENSCARG00000004146) ITGB1 (ENSCARG00000004916) eeig2a (ENSCARG00000005251) ENSCARG00000005265 ENSCARG00000005278 FNDC7 (ENSCARG00000005318) ENSCARG00000005345 ENSCARG00000005363 ENSCARG00000005465 ENSCARG00000005480 ENSCARG00000005484 WDR47 (ENSCARG00000005489) nrp1b (ENSCARG00000005502) #22 ENSCARG00000005535 klhl24a (ENSCARG00000005540) YEATS2 (ENSCARG00000005546) ENSCARG00000005556 acsm3 (ENSCARG00000005595) ncapd2 (ENSCARG00000005641) EEF1AKMT4 (ENSCARG00000005748) camk2n1a (ENSCARG00000005757) ENSCARG00000005765 alg3 (ENSCARG00000005774) ENSCARG00000005789 chrng (ENSCARG00000005832) ENSCARG00000005943 ccl20a.3 (ENSCARG00000005958) CAMSAP2 (ENSCARG00000005982) Cyprininae_a ANCESTRAL SPECIES 479 ENSGT00940000158506.g ENSGT00940000156952.a.b.b ENSGT00940000155408.p.a ENSGT00950000183214.a.a.a.a.d ##21 ENSGT00940000155270.j.b #22 ENSGT01090000259987.a.b.d.b.a.k.d ENSGT01090000259987.a.b.d.b.a.l.b ENSGT00940000155003.f.a ENSGT00940000159520.h.k.a.a.a.b.a.a ENSGT00940000159520.h.k.a.a.b ENSGT00940000165563.b ENSGT00940000154801.m.b.a ENSGT01090000260029.a.b.b.a.a.a.b.b.b ENSGT00950000182860.a.a.b.a.a.a.b.b ENSGT00950000183208.B.f.b.r ENSGT00940000159520.h.k.a.b.a ENSGT00940000155795.e.e Common carp reference MODERN SPECIES 29 ENSCCRG00000014739 ENSCCRG00000007436 ENSCCRG00000069893 ENSCCRG00000020014 ENSCCRG00000005676 ENSCCRG00000067802 basp1 (ENSCCRG00000064377) adcy8 (ENSCCRG00000036920) efr3a (ENSCCRG00000046896) oc90 (ENSCCRG00000057649) ENSCCRG00000032219 KCNQ3 (ENSCCRG00000032233) dnaaf11 (ENSCCRG00000032250) ENSCCRG00000032260 pard3ab (ENSCCRG00000005733) ##21 nrp1b (ENSCCRG00000037961) #22 ENSCCRG00000020563 ENSCCRG00000049986 ENSCCRG00000038506 ENSCCRG00000082607 ENSCCRG00000038503 ENSCCRG00000045160 ENSCCRG00000078608 ENSCCRG00000025171 arhgap12a (ENSCCRG00000074272) ENSCCRG00000042153 kirrel1b (ENSCCRG00000044857) cadm3 (ENSCCRG00000031802) sdhc (ENSCCRG00000034137) atp1a2a (ENSCCRG00000075101) mpz (ENSCCRG00000044087) Golden-line barbel MODERN SPECIES 888 dnaaf11 (ENSSGRG00000048861) CREM (ENSSGRG00000048860) ENSSGRG00000048859 pard3ab (ENSSGRG00000048415) ##21 nrp1b (ENSSGRG00000048394) #22 ITGB1 (ENSSGRG00000047735) epc1b (ENSSGRG00000047717) ENSSGRG00000047715 ENSSGRG00000047714 ENSSGRG00000047713 KIF5B (ENSSGRG00000047547) ENSSGRG00000047537 ENSSGRG00000047525 arhgap12a (ENSSGRG00000047347) ZEB1 (ENSSGRG00000047331) ENSSGRG00000047329 kirrel1b (ENSSGRG00000047327) Zebrafish MODERN SPECIES 11 ENSDARG00000075212 MYO10 (ENSDARG00000017004) ENSDARG00000038646 ENSDARG00000053366 basp1 (ENSDARG00000053358) adcy8 (ENSDARG00000031783) efr3a (ENSDARG00000005163) oc90 (ENSDARG00000001721) KCNQ3 (ENSDARG00000060085) dnaaf11 (ENSDARG00000053318) ENSDARG00000079537 ftr14 (ENSDARG00000053293) ENSDARG00000074118 ENSDARG00000023217 pard3ab (ENSDARG00000010583) ##21 nrp1b (ENSDARG00000027290) #22 ITGB1 (ENSDARG00000109929) itgb1b (ENSDARG00000104484) epc1b (ENSDARG00000060054) itgb1b.1 (ENSDARG00000053232) itgb1b.2 (ENSDARG00000022689) ENSDARG00000105141 KIF5B (ENSDARG00000074131) ftr16 (ENSDARG00000032043) arhgap12a (ENSDARG00000008548) ENSDARG00000016788 ENSDARG00000090699 ENSDARG00000003244 si:ch211-195h23.3 (ENSDARG00000068431) ENSDARG00000093337 kirrel1b (ENSDARG00000056998) Characiphysae ANCESTRAL SPECIES 137 ENSGT00390000001710 ENSGT00940000154095.b.a.a.a ENSGT00940000156086.c ENSGT00940000158089.a ENSGT00950000182997.b ENSGT00940000155469 ENSGT00990000203757 ENSGT00940000158742 ENSGT00390000002143.a ENSGT00940000159042 ENSGT00530000064699 ENSGT00940000159760 ENSGT00940000158506 ENSGT00940000156952.a.b ENSGT00950000183214.a.a.a.a ##21 ENSGT00940000155270.j #22 ENSGT01090000259987.a.b.d.b.a.k ENSGT00940000155003.e.a.e ENSGT01090000259987.a.b.d.b.a.l ENSGT00940000155003.f ENSGT00940000165563.b ENSGT00940000154801.m.b ENSGT00950000182860.a.a.b.a.a.a.b ENSGT00950000183208.B.f.b ENSGT00940000154667.b.b ENSGT00940000154254.b ENSGT00390000004674.i.a ENSGT00390000004674.j ENSGT00940000157064.a.b.a ENSGT00730000111085.B ENSGT00940000156132.g Channel catfish MODERN SPECIES 12 ENSIPUG00000014116 Esyt2 (ENSIPUG00000013984) ENSIPUG00000013667 MYO10 (ENSIPUG00000013577) basp1 (ENSIPUG00000013564) adcy8 (ENSIPUG00000013478) ENSIPUG00000013449 efr3a (ENSIPUG00000013359) ENSIPUG00000013323 ENSIPUG00000013312 KCNQ3 (ENSIPUG00000013189) dnaaf11 (ENSIPUG00000013093) ENSIPUG00000012956 ENSIPUG00000012924 ENSIPUG00000012913 nrp1a (ENSIPUG00000012669) #22 itgb1 (ENSIPUG00000012386) ppp6c (ENSIPUG00000012313) UNG (ENSIPUG00000012269) CORO1C (ENSIPUG00000012205) PPP1CA (ENSIPUG00000012169) ENSIPUG00000012155 ENSIPUG00000012140 ENSIPUG00000012071 ENSIPUG00000012046 ENSIPUG00000012025 ENSIPUG00000012018 pax3a (ENSIPUG00000011985) ACSL3 (ENSIPUG00000011919) ENSIPUG00000011893 gigyf2 (ENSIPUG00000011796) Characiphysae_b ANCESTRAL SPECIES 111 ENSGT00940000156952.a.b ENSGT00950000183214.a.a.a.a ##21 ENSGT00940000155270.j #22 ENSGT01090000259987.a.b.d.b.a.k ENSGT00940000155003.e.a.e ENSGT01090000259987.a.b.d.b.a.l ENSGT00940000155003.f ENSGT00940000165563.b ENSGT00940000154801.m.b ENSGT00950000182860.a.a.b.a.a.a.b ENSGT00950000183208.B.f.b ENSGT00940000154667.b.b ENSGT00940000154254.b ENSGT00390000004674.i.a ENSGT00390000004674.j ENSGT00940000157064.a.b.a ENSGT00730000111085.B ENSGT00940000156132.g Electric eel MODERN SPECIES 1303 ENSEEEG00000008622 nrp1b (ENSEEEG00000008621) #22 Characoidei ANCESTRAL SPECIES 63 ENSGT00940000156952.a.b ENSGT00950000183214.a.a.a.a ##21 ENSGT00940000155270.j #22 ENSGT01090000259987.a.b.d.b.a.k ENSGT01090000259987.a.b.d.b.a.l ENSGT00940000155003.f ENSGT00940000165563.b ENSGT00940000154801.m.b ENSGT00950000182860.a.a.b.a.a.a.b ENSGT00950000183208.B.f.b ENSGT00940000154667.b.b ENSGT00940000154254.b ENSGT00390000004674.i.a ENSGT00390000004674.j ENSGT00940000157064.a.b.a ENSGT00730000111085.B ENSGT00940000156132.g ENSGT00390000015219 Red-bellied piranha MODERN SPECIES 1072 nrp1b (ENSPNAG00000010677) #22 Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 8 ENSAMXG00000019544 cavin4a (ENSAMXG00000043004) ift57 (ENSAMXG00000017051) PRKAB2 (ENSAMXG00000017077) ENSAMXG00000038367 ENSAMXG00000043027 ENSAMXG00000017134 ENSAMXG00000017139 FEM1A (ENSAMXG00000025832) PTPRS (ENSAMXG00000012450) ENSAMXG00000012429 ENSAMXG00000012419 ENSAMXG00000040024 CREM (ENSAMXG00000012403) pard3ab (ENSAMXG00000012347) ##21 nrp1b (ENSAMXG00000012305) #22 ENSAMXG00000044123 ENSAMXG00000033768 #22 ENSAMXG00000043332 itgb1b (ENSAMXG00000035720) itgb1b.1 (ENSAMXG00000012259) ENSAMXG00000029503 epc1b (ENSAMXG00000012237) ENSAMXG00000025650 ENSAMXG00000029680 ENSAMXG00000031480 ENSAMXG00000039004 ENSAMXG00000043582 ENSAMXG00000010059 ZEB1 (ENSAMXG00000010069) ENSAMXG00000010078 Mexicana tetra MODERN SPECIES 8 ift57 (ENSAMXG00000017051) PRKAB2 (ENSAMXG00000017077) ENSAMXG00000038367 ENSAMXG00000043027 ENSAMXG00000017134 ENSAMXG00000017139 FEM1A (ENSAMXG00000025832) PTPRS (ENSAMXG00000012450) ENSAMXG00000012429 ENSAMXG00000012419 ENSAMXG00000040024 CREM (ENSAMXG00000012403) pard3ab (ENSAMXG00000012347) ##21 nrp1b (ENSAMXG00000012305) #22 ENSAMXG00000044123 ENSAMXG00000033768 #22 ENSAMXG00000043332 itgb1b (ENSAMXG00000035720) itgb1b.1 (ENSAMXG00000012259) ENSAMXG00000029503 epc1b (ENSAMXG00000012237) ENSAMXG00000025650 ENSAMXG00000029680 ENSAMXG00000031480 ENSAMXG00000039004 ENSAMXG00000043582 ENSAMXG00000010059 ZEB1 (ENSAMXG00000010069) ENSAMXG00000010078 ENSAMXG00000038324 GSTM3 (ENSAMXG00000000228) Euteleosteomorpha DUPLICATION Euteleosteomorpha DUPLICATION Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000155270.j.e.a #22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000155270.j.e.a #22 Salmoninae ANCESTRAL SPECIES ENSGT00940000155270.j.e.a #22 Huchen DUPLICATION Huchen MODERN SPECIES 9248 ENSHHUG00000037383 #22 Huchen MODERN SPECIES 12019 ENSHHUG00000012747 #22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000155270.j.e.b #22 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000155270.j.e.b #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000155270.j.e.b #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000155270.j.e.b #22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000155270.j.e.b #22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000155270.j.e.b #22 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00940000155270.j.e.b #22 Carangaria ANCESTRAL SPECIES ENSGT00940000155270.j.e.b #22 Carangaria_A ANCESTRAL SPECIES 2 ENSGT00940000156086.c ENSGT00940000158089.a ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a ENSGT00940000156942 ENSGT00950000182997.a.a ENSGT00940000157755.q ENSGT00390000018475 ENSGT00940000178206 ENSGT00930000150950.a.d ENSGT00940000157252.m.a ENSGT01090000259997.a.d.b.a.b.a.b.b.b ENSGT01080000257410.B.a.a.a.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00390000004118 ENSGT00940000155270.j.e.b #22 ENSGT00940000157305 ENSGT00730000111020.b.a ENSGT00940000166973 ENSGT01090000260059.a.b.b.a.b ENSGT00390000018047 ENSGT00940000160025 ENSGT00940000155469 ENSGT01030000235074 ENSGT00940000158742 ENSGT00390000002143.a ENSGT00940000159042 ENSGT00530000064699 ENSGT00940000159760 ENSGT00940000158506 ENSGT01100000263533.b.b.a.a.a.a.a.b Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 81 abcc4 (ENSLCAG00010000625) ENSLCAG00010001036 ENSLCAG00010001042 ZNF622 (ENSLCAG00010001046) ENSLCAG00010001047 ENSLCAG00010001050 #22 nrp1b (ENSLCAG00010001055) #22 ranbp9 (ENSLCAG00010001065) rnf182 (ENSLCAG00010001072) ENSLCAG00010001204 ENSLCAG00010001209 epdr1 (ENSLCAG00010001216) ENSLCAG00010001219 stard3nl (ENSLCAG00010001223) SLCO5A1 (ENSLCAG00010001232) ENSLCAG00010001244 ADARB2 (ENSLCAG00010001249) wdr37 (ENSLCAG00010001278) gtpbp4 (ENSLCAG00010001315) LARP4B (ENSLCAG00010001343) DIP2C (ENSLCAG00010001458) Barramundi perch MODERN SPECIES 81 abcc4 (ENSLCAG00010000625) ENSLCAG00010001036 ENSLCAG00010001042 ZNF622 (ENSLCAG00010001046) ENSLCAG00010001047 ENSLCAG00010001050 #22 nrp1b (ENSLCAG00010001055) #22 ranbp9 (ENSLCAG00010001065) rnf182 (ENSLCAG00010001072) ENSLCAG00010001204 ENSLCAG00010001209 epdr1 (ENSLCAG00010001216) ENSLCAG00010001219 stard3nl (ENSLCAG00010001223) SLCO5A1 (ENSLCAG00010001232) ENSLCAG00010001244 ADARB2 (ENSLCAG00010001249) wdr37 (ENSLCAG00010001278) gtpbp4 (ENSLCAG00010001315) LARP4B (ENSLCAG00010001343) DIP2C (ENSLCAG00010001458) Seriola DUPLICATION Seriola ANCESTRAL SPECIES 59 ENSGT00940000156942 ENSGT00950000182997.a.a ENSGT01090000260059.a.b.b.a.a.b.b ENSGT00940000157755.q ENSGT00390000018475 ENSGT00940000178206 ENSGT00930000150950.a.d ENSGT00940000157252.m.a ENSGT01090000259997.a.d.b.a.b.a.b.b.b.c.b.b.a.b.a ENSGT01080000257410.B.a.a.a.b ENSGT00940000155476 ENSGT01090000259997.a.d.b.a.b.a.b.b.b.c.b.b.a.a ENSGT01090000259997.a.d.b.a.b.a.b.b.b.c.b.b.a.b.b ENSGT00940000161910 ENSGT00390000004118 ENSGT00940000155270.j.e.b.c #22 ENSGT00940000157305 ENSGT00730000111020.b.a ENSGT00940000166973 ENSGT01090000260059.a.b.b.a.b ENSGT00390000018047 ENSGT00940000160025 ENSGT00940000155469 ENSGT01030000235074 ENSGT00940000158742 ENSGT00390000002143.a ENSGT00940000159042 ENSGT00530000064699 ENSGT00940000159760 ENSGT00940000158506 ENSGT01010000222572 Greater amberjack MODERN SPECIES 135 ENSSDUG00000006810 ENSSDUG00000006755 LARP4B (ENSSDUG00000006704) gtpbp4 (ENSSDUG00000006534) wdr37 (ENSSDUG00000006440) ADARB2 (ENSSDUG00000005753) ENSSDUG00000005652 ENSSDUG00000005615 ENSSDUG00000005608 SLCO5A1 (ENSSDUG00000005585) stard3nl (ENSSDUG00000005554) ENSSDUG00000005480 ENSSDUG00000005424 epdr1 (ENSSDUG00000005413) ENSSDUG00000005398 ENSSDUG00000005383 #22 ranbp9 (ENSSDUG00000005364) rnf182 (ENSSDUG00000005350) ENSSDUG00000005330 ENSSDUG00000005310 ENSSDUG00000005293 ENSSDUG00000005277 ZNF622 (ENSSDUG00000005265) MARCHF11 (ENSSDUG00000005253) MYO10 (ENSSDUG00000005173) ENSSDUG00000005147 adcy8 (ENSSDUG00000005027) efr3a (ENSSDUG00000004952) ENSSDUG00000004935 ENSSDUG00000004927 ENSSDUG00000004873 Yellowtail amberjack MODERN SPECIES 3267 DIP2C (ENSSLDG00000020584) ENSSLDG00000020644 ENSSLDG00000020651 LARP4B (ENSSLDG00000020660) gtpbp4 (ENSSLDG00000020688) ENSSLDG00000020749 wdr37 (ENSSLDG00000000092) ADARB2 (ENSSLDG00000000219) ENSSLDG00000000516 SLCO5A1 (ENSSLDG00000000647) stard3nl (ENSSLDG00000000674) ENSSLDG00000000709 ENSSLDG00000000847 epdr1 (ENSSLDG00000000884) ENSSLDG00000000916 ENSSLDG00000000939 #22 ENSSLDG00000000974 #22 ranbp9 (ENSSLDG00000001049) rnf182 (ENSSLDG00000001371) ENSSLDG00000001404 ENSSLDG00000001414 ENSSLDG00000001432 ENSSLDG00000001448 ZNF622 (ENSSLDG00000001508) ENSSLDG00000001616 MYO10 (ENSSLDG00000001644) ENSSLDG00000001819 adcy8 (ENSSLDG00000001846) efr3a (ENSSLDG00000001939) ENSSLDG00000002032 ENSSLDG00000002056 Seriola ANCESTRAL SPECIES ENSGT00940000155270.j.e.b.d #22 Yellowtail amberjack MODERN SPECIES 3267 ENSSLDG00000020644 ENSSLDG00000020651 LARP4B (ENSSLDG00000020660) gtpbp4 (ENSSLDG00000020688) ENSSLDG00000020749 wdr37 (ENSSLDG00000000092) ADARB2 (ENSSLDG00000000219) ENSSLDG00000000516 SLCO5A1 (ENSSLDG00000000647) stard3nl (ENSSLDG00000000674) ENSSLDG00000000709 ENSSLDG00000000847 epdr1 (ENSSLDG00000000884) ENSSLDG00000000916 ENSSLDG00000000939 #22 ENSSLDG00000000974 #22 ranbp9 (ENSSLDG00000001049) rnf182 (ENSSLDG00000001371) ENSSLDG00000001404 ENSSLDG00000001414 ENSSLDG00000001432 ENSSLDG00000001448 ZNF622 (ENSSLDG00000001508) ENSSLDG00000001616 MYO10 (ENSSLDG00000001644) ENSSLDG00000001819 adcy8 (ENSSLDG00000001846) efr3a (ENSSLDG00000001939) ENSSLDG00000002032 ENSSLDG00000002056 KCNQ3 (ENSSLDG00000002080) Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000155270.j.e.b #22 Salmoninae ANCESTRAL SPECIES ENSGT00940000155270.j.e.b #22 Huchen DUPLICATION Huchen MODERN SPECIES 3633 ENSHHUG00000048454 #22 ENSHHUG00000048449 #22 Huchen MODERN SPECIES 3633 ENSHHUG00000048454 #22 ENSHHUG00000048449 #22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000155270.j.f #22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000155270.j.f #22 Salmoninae ANCESTRAL SPECIES ENSGT00940000155270.j.f #22 Huchen MODERN SPECIES 8107 ENSHHUG00000001227 #22 Reedfish DUPLICATION Reedfish MODERN SPECIES 16 ENSECRG00000006074 hibch (ENSECRG00000006082) INPP1 (ENSECRG00000006100) mfsd6a (ENSECRG00000006109) nemp2 (ENSECRG00000006123) nab1a (ENSECRG00000006135) glsa (ENSECRG00000006167) ENSECRG00000006225 STAT4 (ENSECRG00000006257) atic (ENSECRG00000006296) fn1a (ENSECRG00000006329) ENSECRG00000006363 cpo (ENSECRG00000006382) PARD3B (ENSECRG00000006452) #21 ENSECRG00000006477 #22 nrp2a (ENSECRG00000006488) #22 ino80db (ENSECRG00000006513) #23 ndufs1 (ENSECRG00000006523) #24 eef1b2 (ENSECRG00000006546) #25 CMKLR2 (ENSECRG00000006553) #26 ADAM23 (ENSECRG00000006567) #29 FAM237A (ENSECRG00000006588) mdh1b (ENSECRG00000006596) FASTKD2 (ENSECRG00000006608) CTLA4 (ENSECRG00000006618) #19 raph1b (ENSECRG00000006637) #14 abi2b (ENSECRG00000006679) #13 cyp20a1 (ENSECRG00000006712) #12 ENSECRG00000006727 tmem237b (ENSECRG00000006739) MPP4 (ENSECRG00000006757) Reedfish MODERN SPECIES 16 mstnb (ENSECRG00000006069) ENSECRG00000006074 hibch (ENSECRG00000006082) INPP1 (ENSECRG00000006100) mfsd6a (ENSECRG00000006109) nemp2 (ENSECRG00000006123) nab1a (ENSECRG00000006135) glsa (ENSECRG00000006167) ENSECRG00000006225 STAT4 (ENSECRG00000006257) atic (ENSECRG00000006296) fn1a (ENSECRG00000006329) ENSECRG00000006363 cpo (ENSECRG00000006382) PARD3B (ENSECRG00000006452) #21 ENSECRG00000006477 #22 nrp2a (ENSECRG00000006488) #22 ino80db (ENSECRG00000006513) #23 ndufs1 (ENSECRG00000006523) #24 eef1b2 (ENSECRG00000006546) #25 CMKLR2 (ENSECRG00000006553) #26 ADAM23 (ENSECRG00000006567) #29 FAM237A (ENSECRG00000006588) mdh1b (ENSECRG00000006596) FASTKD2 (ENSECRG00000006608) CTLA4 (ENSECRG00000006618) #19 raph1b (ENSECRG00000006637) #14 abi2b (ENSECRG00000006679) #13 cyp20a1 (ENSECRG00000006712) #12 ENSECRG00000006727 tmem237b (ENSECRG00000006739)