Gnathostomata ANCESTRAL SPECIES ENSGT00940000154901.C #22 Euteleostomi DUPLICATION Euteleostomi ANCESTRAL SPECIES 281 ENSGT00390000017869 ENSGT00510000048574 ENSGT00940000168756 ENSGT00390000011180 ENSGT00940000172086 ENSGT00390000007539 #28 ENSGT00390000002731 ENSGT00390000013444.a.b.b ENSGT00940000154911 ENSGT00940000161450 ENSGT00940000159375 #7 ENSGT00940000157743 ENSGT00940000159147 ENSGT00940000154901.C.b #22 Sarcopterygii ANCESTRAL SPECIES 176 ENSGT00940000164137 ENSGT00940000160539 ENSGT00950000182985.b.b ENSGT00940000157074 ENSGT00390000017869 ENSGT00510000048574 ENSGT00390000002731 ENSGT00390000013444.a.b.b ENSGT00940000154911 ENSGT00940000161450 ENSGT00940000159375 #7 ENSGT00940000157743 ENSGT00940000154524.a ENSGT00940000159147 ENSGT00940000154901.C.b #22 ENSGT00530000063721.B ENSGT00930000151054 ENSGT00940000158249 ENSGT01030000234517.G ENSGT00940000156810 ENSGT00940000156764.b ENSGT00620000087966.b Tetrapoda ANCESTRAL SPECIES 42 ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028 ENSGT01030000234598.b.b ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157941 ENSGT00390000007971 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b #22 ENSGT00620000087966.b ENSGT00940000156764.b ENSGT00940000156810 ENSGT01030000234517.H.b ENSGT00940000158249 ENSGT01030000234517.G ENSGT00930000151054 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00950000183114.a.a ENSGT00940000159274 ENSGT00940000160421 ENSGT00940000158182 ENSGT00940000160921 ENSGT00950000182836.a Amniota DUPLICATION Amniota ANCESTRAL SPECIES ENSGT00940000154901.C.b.e #22 Mammalia ANCESTRAL SPECIES ENSGT00940000154901.C.b.e #22 Theria ANCESTRAL SPECIES 8 ENSGT00940000159375 #7 ENSGT00940000161450 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00940000156048.a.a ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162660.b.e.b ENSGT00940000161499 #20 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539 #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00950000183059.a ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Eutheria ANCESTRAL SPECIES 3 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162660.b.e.b ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 ENSGT00390000011639 #37 Boreoeutheria ANCESTRAL SPECIES 1 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Euarchontoglires ANCESTRAL SPECIES 1 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Primates ANCESTRAL SPECIES ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Haplorrhini ANCESTRAL SPECIES ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Simiiformes ANCESTRAL SPECIES ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00910000147729 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Catarrhini ANCESTRAL SPECIES 1 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00550000075025.`b.b.b ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00910000147729 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Cercopithecidae ANCESTRAL SPECIES ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00550000075025.`b.b.b ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00550000075025.`b.b.b ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Vervet Monkey MODERN SPECIES FLRT1 (ENSCSAG00000019174) #7 OTUB1 (ENSCSAG00000006902) #8 COX8A (ENSCSAG00000006887) #9 NAA40 (ENSCSAG00000006886) #10 RCOR2 (ENSCSAG00000006881) #11 MARK2 (ENSCSAG00000006877) #12 SPINDOC (ENSCSAG00000006870) #13 ZFTA (ENSCSAG00000006866) #14 ENSCSAG00000006861 #15 ATL3 (ENSCSAG00000006859) #16 PLAAT3 (ENSCSAG00000006852) #17 PLAAT2 (ENSCSAG00000006843) #18 PLAAT4 (ENSCSAG00000006839) #19 LGALS12 (ENSCSAG00000006834) #20 PLAAT5 (ENSCSAG00000006826) #21 SLC22A8 (ENSCSAG00000006811) #22 SLC22A6 (ENSCSAG00000006803) #23 CHRM1 (ENSCSAG00000019175) #24 SLC3A2 (ENSCSAG00000006769) #25 WDR74 (ENSCSAG00000006751) #26 STX5 (ENSCSAG00000006748) #27 NXF1 (ENSCSAG00000006739) #28 TMEM223 (ENSCSAG00000006730) #29 TMEM179B (ENSCSAG00000006726) #30 TAF6L (ENSCSAG00000006720) #31 POLR2G (ENSCSAG00000006715) #32 ZBTB3 (ENSCSAG00000006712) #33 TTC9C (ENSCSAG00000006708) #34 HNRNPUL2 (ENSCSAG00000006701) #35 GNG3 (ENSCSAG00000006696) #36 BSCL2 (ENSCSAG00000006684) #37 Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00550000075025.`b.b.b ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Macaca ANCESTRAL SPECIES 2 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00550000075025.`b.b.b ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Macaca_a ANCESTRAL SPECIES 3 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000163505.a.a.a.b.a.b.b.b.a.a ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00960000190678 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 Rhesus MODERN SPECIES 5 ENSMMUG00000000478 COX8A (ENSMMUG00000053930) #9 NAA40 (ENSMMUG00000018632) #10 ENSMMUG00000052569 RCOR2 (ENSMMUG00000014133) #11 MARK2 (ENSMMUG00000014131) #12 ENSMMUG00000059969 SPINDOC (ENSMMUG00000018152) #13 ZFTA (ENSMMUG00000047347) #14 RTN3 (ENSMMUG00000015876) #15 ATL3 (ENSMMUG00000005776) #16 PLAAT3 (ENSMMUG00000005775) #18 PLAAT4 (ENSMMUG00000045105) #19 LGALS12 (ENSMMUG00000018304) #20 PLAAT5 (ENSMMUG00000018316) #21 SLC22A8 (ENSMMUG00000016225) #22 SLC22A6 (ENSMMUG00000016227) #23 CHRM1 (ENSMMUG00000017292) #24 SLC3A2 (ENSMMUG00000020354) #25 ENSMMUG00000064232 WDR74 (ENSMMUG00000018779) #26 STX5 (ENSMMUG00000005280) #27 NXF1 (ENSMMUG00000000188) #28 TMEM223 (ENSMMUG00000023094) #29 TMEM179B (ENSMMUG00000003682) #30 TAF6L (ENSMMUG00000000110) #31 POLR2G (ENSMMUG00000014368) #32 ZBTB3 (ENSMMUG00000056054) #33 TTC9C (ENSMMUG00000039671) #34 HNRNPUL2 (ENSMMUG00000051635) #35 BSCL2 (ENSMMUG00000014363) #37 Crab-eating macaque MODERN SPECIES 5 OTUB1 (ENSMFAG00000033654) #8 COX8A (ENSMFAG00000001343) #9 NAA40 (ENSMFAG00000034118) #10 RCOR2 (ENSMFAG00000039149) #11 MARK2 (ENSMFAG00000032452) #12 ENSMFAG00000063584 SPINDOC (ENSMFAG00000002160) #13 ENSMFAG00000059182 RTN3 (ENSMFAG00000030265) #15 ATL3 (ENSMFAG00000035680) #16 ENSMFAG00000053940 PLAAT3 (ENSMFAG00000032359) #17 PLAAT4 (ENSMFAG00000035178) #19 LGALS12 (ENSMFAG00000041888) #20 PLAAT5 (ENSMFAG00000039225) #21 SLC22A8 (ENSMFAG00000030409) #22 SLC22A6 (ENSMFAG00000003484) #23 ENSMFAG00000048955 ENSMFAG00000028626 SLC3A2 (ENSMFAG00000032262) #25 ENSMFAG00000055662 WDR74 (ENSMFAG00000034162) #26 STX5 (ENSMFAG00000003488) #27 NXF1 (ENSMFAG00000045399) #28 TMEM223 (ENSMFAG00000030143) #29 TMEM179B (ENSMFAG00000037362) #30 TAF6L (ENSMFAG00000030912) #31 POLR2G (ENSMFAG00000033674) #32 ZBTB3 (ENSMFAG00000003520) #33 TTC9C (ENSMFAG00000036997) #34 HNRNPUL2 (ENSMFAG00000041014) #35 Pig-tailed macaque MODERN SPECIES 433 OTUB1 (ENSMNEG00000041958) #8 COX8A (ENSMNEG00000041613) #9 NAA40 (ENSMNEG00000032942) #10 RCOR2 (ENSMNEG00000038097) #11 MARK2 (ENSMNEG00000045327) #12 SPINDOC (ENSMNEG00000031960) #13 ZFTA (ENSMNEG00000044610) #14 RTN3 (ENSMNEG00000044489) #15 ENSMNEG00000033797 ATL3 (ENSMNEG00000034634) #16 PLAAT3 (ENSMNEG00000039570) #17 PLAAT2 (ENSMNEG00000038914) #18 PLAAT4 (ENSMNEG00000045290) #19 LGALS12 (ENSMNEG00000040245) #20 PLAAT5 (ENSMNEG00000034274) #21 SLC22A8 (ENSMNEG00000038818) #22 SLC22A6 (ENSMNEG00000043253) #23 ENSMNEG00000025380 CHRM1 (ENSMNEG00000010440) #24 SLC3A2 (ENSMNEG00000044452) #25 TEX54 (ENSMNEG00000032932) WDR74 (ENSMNEG00000042608) #26 STX5 (ENSMNEG00000041981) #27 NXF1 (ENSMNEG00000034667) #28 TMEM223 (ENSMNEG00000030390) #29 TMEM179B (ENSMNEG00000000022) #30 TAF6L (ENSMNEG00000031769) #31 POLR2G (ENSMNEG00000041523) #32 ZBTB3 (ENSMNEG00000032222) #33 TTC9C (ENSMNEG00000038138) #34 HNRNPUL2 (ENSMNEG00000036955) #35 Cercopithecinae_b ANCESTRAL SPECIES 16 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00550000075025.`b.b.b ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Olive baboon MODERN SPECIES 3 MACROD1 (ENSPANG00000005925) OTUB1 (ENSPANG00000032360) #8 COX8A (ENSPANG00000039572) #9 NAA40 (ENSPANG00000002369) #10 RCOR2 (ENSPANG00000007283) #11 MARK2 (ENSPANG00000026211) #12 SPINDOC (ENSPANG00000043963) #13 ENSPANG00000045988 RTN3 (ENSPANG00000004686) #15 ATL3 (ENSPANG00000025889) #16 PLAAT3 (ENSPANG00000032107) #17 PLAAT2 (ENSPANG00000005852) #18 PLAAT4 (ENSPANG00000045447) #19 LGALS12 (ENSPANG00000012182) #20 PLAAT5 (ENSPANG00000015204) #21 SLC22A8 (ENSPANG00000017441) #22 SLC22A6 (ENSPANG00000013726) #23 CHRM1 (ENSPANG00000021843) #24 SLC3A2 (ENSPANG00000012315) #25 WDR74 (ENSPANG00000013148) #26 STX5 (ENSPANG00000019343) #27 NXF1 (ENSPANG00000012132) #28 TMEM223 (ENSPANG00000012314) #29 TMEM179B (ENSPANG00000021117) #30 TAF6L (ENSPANG00000013647) #31 POLR2G (ENSPANG00000037490) #32 ZBTB3 (ENSPANG00000008469) #33 TTC9C (ENSPANG00000039235) #34 HNRNPUL2 (ENSPANG00000023745) #35 GNG3 (ENSPANG00000042558) #36 BSCL2 (ENSPANG00000011406) #37 Cercopithecinae_d ANCESTRAL SPECIES 6 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00550000075025.`b.b.b ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Drill MODERN SPECIES 1111 OTUB1 (ENSMLEG00000039512) #8 COX8A (ENSMLEG00000043306) #9 NAA40 (ENSMLEG00000040713) #10 RCOR2 (ENSMLEG00000041544) #11 MARK2 (ENSMLEG00000042721) #12 SPINDOC (ENSMLEG00000042638) #13 ZFTA (ENSMLEG00000038685) #14 RTN3 (ENSMLEG00000009760) #15 ENSMLEG00000004674 ATL3 (ENSMLEG00000040413) #16 PLAAT3 (ENSMLEG00000036330) #17 PLAAT2 (ENSMLEG00000034362) #18 PLAAT4 (ENSMLEG00000043996) #19 LGALS12 (ENSMLEG00000041910) #20 PLAAT5 (ENSMLEG00000040885) #21 SLC22A8 (ENSMLEG00000044339) #22 SLC22A6 (ENSMLEG00000031737) #23 ENSMLEG00000022707 CHRM1 (ENSMLEG00000023394) #24 SLC3A2 (ENSMLEG00000042574) #25 WDR74 (ENSMLEG00000032669) #26 TEX54 (ENSMLEG00000030108) STX5 (ENSMLEG00000042667) #27 TMEM223 (ENSMLEG00000029784) #29 NXF1 (ENSMLEG00000026574) #28 TMEM179B (ENSMLEG00000039000) #30 TAF6L (ENSMLEG00000032444) #31 POLR2G (ENSMLEG00000032928) #32 ZBTB3 (ENSMLEG00000042521) #33 TTC9C (ENSMLEG00000036250) #34 HNRNPUL2 (ENSMLEG00000033906) #35 Sooty mangabey MODERN SPECIES 518 FLRT1 (ENSCATG00000003844) #7 OTUB1 (ENSCATG00000036180) #8 COX8A (ENSCATG00000033437) #9 NAA40 (ENSCATG00000035111) #10 RCOR2 (ENSCATG00000033413) #11 MARK2 (ENSCATG00000030205) #12 SPINDOC (ENSCATG00000043222) #13 ZFTA (ENSCATG00000038355) #14 RTN3 (ENSCATG00000038469) #15 ATL3 (ENSCATG00000034537) #16 PLAAT3 (ENSCATG00000039316) #17 PLAAT2 (ENSCATG00000043587) #18 PLAAT4 (ENSCATG00000042576) #19 LGALS12 (ENSCATG00000038681) #20 PLAAT5 (ENSCATG00000035197) #21 SLC22A8 (ENSCATG00000034455) #22 SLC22A6 (ENSCATG00000033614) #23 ENSCATG00000005005 CHRM1 (ENSCATG00000004775) #24 SLC3A2 (ENSCATG00000043727) #25 WDR74 (ENSCATG00000035035) #26 TEX54 (ENSCATG00000044482) STX5 (ENSCATG00000033087) #27 NXF1 (ENSCATG00000044025) #28 TMEM223 (ENSCATG00000034294) #29 TMEM179B (ENSCATG00000036661) #30 TAF6L (ENSCATG00000031925) #31 POLR2G (ENSCATG00000034443) #32 ZBTB3 (ENSCATG00000034435) #33 TTC9C (ENSCATG00000035217) #34 HNRNPUL2 (ENSCATG00000034588) #35 Rhinopithecus ANCESTRAL SPECIES 1 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00550000075025.`b.b.b ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 Golden snub-nosed monkey MODERN SPECIES 689 NAA40 (ENSRROG00000040534) #10 RCOR2 (ENSRROG00000037726) #11 MARK2 (ENSRROG00000030516) #12 SPINDOC (ENSRROG00000013487) #13 ZFTA (ENSRROG00000004175) #14 RTN3 (ENSRROG00000037363) #15 ENSRROG00000045513 ATL3 (ENSRROG00000036759) #16 PLAAT3 (ENSRROG00000043275) #17 ENSRROG00000003500 PLAAT2 (ENSRROG00000043068) #18 PLAAT4 (ENSRROG00000043528) #19 LGALS12 (ENSRROG00000041051) #20 PLAAT5 (ENSRROG00000020148) #21 SLC22A9 (ENSRROG00000044160) SLC22A8 (ENSRROG00000032433) #22 SLC22A6 (ENSRROG00000028501) #23 ENSRROG00000018171 CHRM1 (ENSRROG00000008830) #24 SLC3A2 (ENSRROG00000038784) #25 Black snub-nosed monkey MODERN SPECIES 708 NAA40 (ENSRBIG00000031380) #10 MARK2 (ENSRBIG00000022423) #12 SPINDOC (ENSRBIG00000033800) #13 ZFTA (ENSRBIG00000027331) #14 RTN3 (ENSRBIG00000032715) #15 ENSRBIG00000044188 ATL3 (ENSRBIG00000028494) #16 PLAAT3 (ENSRBIG00000032126) #17 ENSRBIG00000029167 PLAAT2 (ENSRBIG00000042420) #18 PLAAT4 (ENSRBIG00000042937) #19 LGALS12 (ENSRBIG00000034955) #20 PLAAT5 (ENSRBIG00000035439) #21 SLC22A9 (ENSRBIG00000034031) SLC22A8 (ENSRBIG00000040948) #22 SLC22A6 (ENSRBIG00000039106) #23 ENSRBIG00000018377 CHRM1 (ENSRBIG00000027683) #24 SLC3A2 (ENSRBIG00000039661) #25 Hominoidea ANCESTRAL SPECIES 1 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00550000075025.`b.b.b ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00910000147729 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Hominidae ANCESTRAL SPECIES 1 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00550000075025.`b.b.b ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00910000147729 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Homo/Pan/Gorilla group ANCESTRAL SPECIES 8 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d.b #15 ENSGT00940000157482.d.a #15 ENSGT00550000075025.`b.b.b ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00910000147729 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d.a #15 ENSGT00550000075025.`b.b.b ENSGT00940000157482.d.b #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00910000147729 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Pan ANCESTRAL SPECIES 1 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d.a #15 ENSGT00550000075025.`b.b.b ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00910000147729 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Chimpanzee MODERN SPECIES 2 MARK2 (ENSPTRG00000043914) #12 SPINDOC (ENSPTRG00000003812) #13 ZFTA (ENSPTRG00000045157) #14 RTN3 (ENSPTRG00000003809) #15 ENSPTRG00000043962 ATL3 (ENSPTRG00000003807) #16 PLAAT3 (ENSPTRG00000003806) #17 PLAAT2 (ENSPTRG00000003805) #18 PLAAT4 (ENSPTRG00000003804) #19 LGALS12 (ENSPTRG00000003803) #20 PLAAT5 (ENSPTRG00000003801) #21 SLC22A9 (ENSPTRG00000003800) SLC22A10 (ENSPTRG00000003799) SLC22A25 (ENSPTRG00000024251) SLC22A24 (ENSPTRG00000003797) SLC22A8 (ENSPTRG00000003796) #22 SLC22A6 (ENSPTRG00000023694) #23 ENSPTRG00000046841 CHRM1 (ENSPTRG00000003795) #24 SLC3A2 (ENSPTRG00000003794) #25 WDR74 (ENSPTRG00000047249) #26 STX5 (ENSPTRG00000003792) #27 ENSPTRG00000051335 NXF1 (ENSPTRG00000003791) #28 TMEM223 (ENSPTRG00000003790) #29 TMEM179B (ENSPTRG00000003789) #30 TAF6L (ENSPTRG00000003787) #31 ENSPTRG00000050327 ZBTB3 (ENSPTRG00000003785) #33 TTC9C (ENSPTRG00000023824) #34 HNRNPUL2 (ENSPTRG00000034359) #35 Bonobo MODERN SPECIES 2 MARK2 (ENSPPAG00000032968) #12 SPINDOC (ENSPPAG00000031069) #13 RTN3 (ENSPPAG00000030987) #15 ENSPPAG00000043354 ATL3 (ENSPPAG00000000239) #16 PLAAT3 (ENSPPAG00000038739) #17 PLAAT2 (ENSPPAG00000034354) #18 PLAAT4 (ENSPPAG00000033745) #19 LGALS12 (ENSPPAG00000042349) #20 PLAAT5 (ENSPPAG00000040450) #21 SLC22A9 (ENSPPAG00000029821) SLC22A10 (ENSPPAG00000040455) SLC22A25 (ENSPPAG00000039130) ENSPPAG00000042818 SLC22A24 (ENSPPAG00000035098) SLC22A8 (ENSPPAG00000041453) #22 SLC22A6 (ENSPPAG00000035836) #23 ENSPPAG00000024710 CHRM1 (ENSPPAG00000018668) #24 SLC3A2 (ENSPPAG00000020658) #25 WDR74 (ENSPPAG00000036028) #26 TEX54 (ENSPPAG00000012450) STX5 (ENSPPAG00000039956) #27 NXF1 (ENSPPAG00000041498) #28 TMEM179B (ENSPPAG00000038907) #30 TMEM223 (ENSPPAG00000035801) #29 TAF6L (ENSPPAG00000009707) #31 POLR2G (ENSPPAG00000039868) #32 ZBTB3 (ENSPPAG00000031673) #33 TTC9C (ENSPPAG00000030010) #34 ENSPPAG00000041471 Human MODERN SPECIES 2 RCOR2 (ENSG00000167771) #11 MARK2 (ENSG00000072518) #12 SPINDOC (ENSG00000168005) #13 ZFTA (ENSG00000188070) #14 RTN3 (ENSG00000133318) #15 ATL3 (ENSG00000184743) #16 PLAAT3 (ENSG00000176485) #17 PLAAT2 (ENSG00000133328) #18 PLAAT4 (ENSG00000133321) #19 LGALS12 (ENSG00000133317) #20 PLAAT5 (ENSG00000168004) #21 SLC22A9 (ENSG00000149742) SLC22A10 (ENSG00000184999) SLC22A25 (ENSG00000196600) SLC22A24 (ENSG00000197658) SLC22A8 (ENSG00000149452) #22 SLC22A6 (ENSG00000197901) #23 CHRM1 (ENSG00000168539) #24 SLC3A2 (ENSG00000168003) #25 WDR74 (ENSG00000133316) #26 TEX54 (ENSG00000283268) STX5 (ENSG00000162236) #27 NXF1 (ENSG00000162231) #28 TMEM179B (ENSG00000185475) #30 TMEM223 (ENSG00000168569) #29 TAF6L (ENSG00000162227) #31 POLR2G (ENSG00000168002) #32 ZBTB3 (ENSG00000185670) #33 TTC9C (ENSG00000162222) #34 HNRNPUL2 (ENSG00000214753) #35 GNG3 (ENSG00000162188) #36 Gorilla MODERN SPECIES 2 SPINDOC (ENSGGOG00000010130) #13 ZFTA (ENSGGOG00000006043) #14 RTN3 (ENSGGOG00000009872) #15 ENSGGOG00000037187 ATL3 (ENSGGOG00000009860) #16 PLAAT3 (ENSGGOG00000001944) #17 PLAAT2 (ENSGGOG00000000282) #18 PLAAT4 (ENSGGOG00000000281) #19 LGALS12 (ENSGGOG00000000279) #20 PLAAT5 (ENSGGOG00000000970) #21 SLC22A9 (ENSGGOG00000003608) SLC22A10 (ENSGGOG00000014919) CSNK1G2 (ENSGGOG00000007714) SLC22A25 (ENSGGOG00000007793) SLC22A24 (ENSGGOG00000005570) SLC22A8 (ENSGGOG00000003920) #22 SLC22A6 (ENSGGOG00000003915) #23 ENSGGOG00000036955 CHRM1 (ENSGGOG00000016344) #24 SLC3A2 (ENSGGOG00000011233) #25 WDR74 (ENSGGOG00000001923) #26 TEX54 (ENSGGOG00000037357) STX5 (ENSGGOG00000001919) #27 ENSGGOG00000040653 NXF1 (ENSGGOG00000001911) #28 TMEM223 (ENSGGOG00000001910) #29 TMEM179B (ENSGGOG00000001907) #30 TAF6L (ENSGGOG00000011807) #31 POLR2G (ENSGGOG00000011739) #32 ZBTB3 (ENSGGOG00000011735) #33 TTC9C (ENSGGOG00000011733) #34 Orangutan MODERN SPECIES 2 RCOR2 (ENSPPYG00000003124) #11 MARK2 (ENSPPYG00000003125) #12 SPINDOC (ENSPPYG00000003126) #13 ZFTA (ENSPPYG00000003127) #14 RTN3 (ENSPPYG00000003128) #15 ATL3 (ENSPPYG00000003129) #16 PLAAT3 (ENSPPYG00000031710) #17 PLAAT2 (ENSPPYG00000003130) #18 ENSPPYG00000003131 #19 LGALS12 (ENSPPYG00000003132) #20 PLAAT5 (ENSPPYG00000003133) #21 SLC22A9 (ENSPPYG00000003134) SLC22A10 (ENSPPYG00000038210) SLC22A25 (ENSPPYG00000003135) SLC22A24 (ENSPPYG00000003136) SLC22A8 (ENSPPYG00000003137) #22 SLC22A6 (ENSPPYG00000003138) #23 CHRM1 (ENSPPYG00000003139) #24 SLC3A2 (ENSPPYG00000003140) #25 WDR74 (ENSPPYG00000003141) #26 TEX54 (ENSPPYG00000034365) STX5 (ENSPPYG00000003142) #27 NXF1 (ENSPPYG00000003143) #28 TMEM223 (ENSPPYG00000003144) #29 TMEM179B (ENSPPYG00000003145) #30 TAF6L (ENSPPYG00000003146) #31 ENSPPYG00000003147 #32 ZBTB3 (ENSPPYG00000003148) #33 TTC9C (ENSPPYG00000030629) #34 HNRNPUL2 (ENSPPYG00000029773) #35 GNG3 (ENSPPYG00000003150) #36 Gibbon MODERN SPECIES 19 RCOR2 (ENSNLEG00000004721) #11 MARK2 (ENSNLEG00000004656) #12 ENSNLEG00000004652 #13 ZFTA (ENSNLEG00000004648) #14 RTN3 (ENSNLEG00000004594) #15 ENSNLEG00000030866 ENSNLEG00000004565 #16 PLAAT3 (ENSNLEG00000004552) #17 PLAAT2 (ENSNLEG00000004549) #18 ENSNLEG00000035013 #19 LGALS12 (ENSNLEG00000004499) #20 PLAAT5 (ENSNLEG00000004486) #21 SLC22A10 (ENSNLEG00000004483) SLC22A25 (ENSNLEG00000004474) SLC22A24 (ENSNLEG00000034554) SLC22A8 (ENSNLEG00000004442) #22 SLC22A6 (ENSNLEG00000004394) #23 ENSNLEG00000035187 CHRM1 (ENSNLEG00000035083) #24 SLC3A2 (ENSNLEG00000004298) #25 WDR74 (ENSNLEG00000004238) #26 STX5 (ENSNLEG00000004184) #27 ENSNLEG00000035784 ENSNLEG00000004123 #28 TMEM223 (ENSNLEG00000004119) #29 TMEM179B (ENSNLEG00000036102) #30 TAF6L (ENSNLEG00000032645) #31 ENSNLEG00000004097 #32 ZBTB3 (ENSNLEG00000031633) #33 ENSNLEG00000034047 #34 HNRNPUL2 (ENSNLEG00000004077) #35 Platyrrhini ANCESTRAL SPECIES 15 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00910000147729 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Cebidae ANCESTRAL SPECIES ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646.e.a #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00910000147729 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975.i.b #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Cebidae_a ANCESTRAL SPECIES 18 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646.e.a #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00910000147729 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975.i.a #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Bolivian squirrel monkey MODERN SPECIES 42 AKAP17A (ENSSBOG00000019780) ASMTL (ENSSBOG00000032915) ENSSBOG00000032971 IL3RA (ENSSBOG00000019496) CSF2RA (ENSSBOG00000015957) RTN3 (ENSSBOG00000033351) #15 ATL3 (ENSSBOG00000000876) #16 PLAAT3 (ENSSBOG00000018544) #17 PLAAT2 (ENSSBOG00000004535) #18 PLAAT4 (ENSSBOG00000022541) #19 LGALS12 (ENSSBOG00000022059) #20 PLAAT5 (ENSSBOG00000018115) #21 SLC22A9 (ENSSBOG00000030304) SLC22A10 (ENSSBOG00000019055) SLC22A25 (ENSSBOG00000026216) SLC22A8 (ENSSBOG00000018591) #22 SLC22A6 (ENSSBOG00000016011) #23 ENSSBOG00000018203 CHRM1 (ENSSBOG00000021747) #24 SLC3A2 (ENSSBOG00000019428) #25 WDR74 (ENSSBOG00000030887) #26 STX5 (ENSSBOG00000018874) #27 ENSSBOG00000029029 NXF1 (ENSSBOG00000019587) #28 TMEM223 (ENSSBOG00000034790) #29 TMEM179B (ENSSBOG00000030503) #30 TAF6L (ENSSBOG00000030560) #31 POLR2G (ENSSBOG00000015220) #32 ZBTB3 (ENSSBOG00000032000) #33 TTC9C (ENSSBOG00000023530) #34 HNRNPUL2 (ENSSBOG00000026780) #35 Capuchin MODERN SPECIES 316 SLC22A8 (ENSCCAG00000037209) #22 SLC22A6 (ENSCCAG00000029767) #23 ENSCCAG00000018405 CHRM1 (ENSCCAG00000006069) #24 SLC3A2 (ENSCCAG00000028057) #25 WDR74 (ENSCCAG00000020060) #26 STX5 (ENSCCAG00000013514) #27 NXF1 (ENSCCAG00000030567) #28 TMEM223 (ENSCCAG00000009078) #29 TMEM179B (ENSCCAG00000028319) #30 TAF6L (ENSCCAG00000036664) #31 ENSCCAG00000027746 ZBTB3 (ENSCCAG00000021977) #33 ENSCCAG00000022329 HNRNPUL2 (ENSCCAG00000037674) #35 BSCL2 (ENSCCAG00000026340) #37 Marmoset MODERN SPECIES 2 NAA40 (ENSCJAG00000018311) #10 RCOR2 (ENSCJAG00000018326) #11 MARK2 (ENSCJAG00000018341) #12 SPINDOC (ENSCJAG00000018418) #13 ZFTA (ENSCJAG00000047167) #14 RTN3 (ENSCJAG00000018422) #15 ATL3 (ENSCJAG00000018444) #16 ENSCJAG00000033686 PLAAT3 (ENSCJAG00000018470) #17 PLAAT2 (ENSCJAG00000018481) #18 PLAAT4 (ENSCJAG00000018491) #19 LGALS12 (ENSCJAG00000018504) #20 PLAAT5 (ENSCJAG00000038446) #21 SLC22A10 (ENSCJAG00000018512) ENSCJAG00000043818 SLC22A8 (ENSCJAG00000046805) #22 SLC22A6 (ENSCJAG00000018534) #23 ENSCJAG00000080197 CHRM1 (ENSCJAG00000018561) #24 ENSCJAG00000018569 #25 ENSCJAG00000018581 #26 TEX54 (ENSCJAG00000047769) STX5 (ENSCJAG00000018606) #27 NXF1 (ENSCJAG00000018635) #28 TMEM223 (ENSCJAG00000018681) #29 TMEM179B (ENSCJAG00000018683) #30 TAF6L (ENSCJAG00000040347) #31 ENSCJAG00000018688 #32 ZBTB3 (ENSCJAG00000018693) #33 TTC9C (ENSCJAG00000018703) #34 HNRNPUL2 (ENSCJAG00000018709) #35 Mas night monkey MODERN SPECIES 336 SLC22A8 (ENSANAG00000023797) #22 SLC22A6 (ENSANAG00000033554) #23 ENSANAG00000020205 CHRM1 (ENSANAG00000020194) #24 SLC3A2 (ENSANAG00000037370) #25 WDR74 (ENSANAG00000031747) #26 STX5 (ENSANAG00000028924) #27 NXF1 (ENSANAG00000024600) #28 TMEM223 (ENSANAG00000037673) #29 TMEM179B (ENSANAG00000036828) #30 TAF6L (ENSANAG00000037691) #31 POLR2G (ENSANAG00000037428) #32 ZBTB3 (ENSANAG00000026704) #33 TTC9C (ENSANAG00000030687) #34 HNRNPUL2 (ENSANAG00000027153) #35 GNG3 (ENSANAG00000028934) #36 Tarsier MODERN SPECIES 3012 SLC22A8 (ENSTSYG00000031102) #22 SLC22A6 (ENSTSYG00000002150) #23 Strepsirrhini ANCESTRAL SPECIES 20 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Lemuriformes ANCESTRAL SPECIES 14 ENSGT00940000159437 ENSGT00940000161630 ENSGT00390000015815 ENSGT00940000162317 ENSGT00940000160034 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00390000008351 ENSGT00390000007071 ENSGT00390000011180 ENSGT00390000018613.b.s.a ENSGT00940000161375.b ENSGT00940000162437 ENSGT00940000162436 #21 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Mouse lemur MODERN SPECIES 27 CTSW (ENSMICG00000029293) FIBP (ENSMICG00000043326) CCDC85B (ENSMICG00000006912) FOSL1 (ENSMICG00000012846) C11orf68 (ENSMICG00000012852) DRAP1 (ENSMICG00000032164) TSGA10IP (ENSMICG00000038933) SART1 (ENSMICG00000030096) EIF1AD (ENSMICG00000038645) BANF1 (ENSMICG00000037787) CST6 (ENSMICG00000017209) CATSPER1 (ENSMICG00000017211) ENSMICG00000035999 PLAAT5 (ENSMICG00000004239) #21 SLC22A24 (ENSMICG00000034911) SLC22A8 (ENSMICG00000006419) #22 SLC22A6 (ENSMICG00000026456) #23 CHRM1 (ENSMICG00000047391) #24 SLC3A2 (ENSMICG00000017390) #25 WDR74 (ENSMICG00000017388) #26 TEX54 (ENSMICG00000046387) STX5 (ENSMICG00000017386) #27 NXF1 (ENSMICG00000000980) #28 TMEM223 (ENSMICG00000046109) #29 TMEM179B (ENSMICG00000000976) #30 TAF6L (ENSMICG00000036223) #31 POLR2G (ENSMICG00000009967) #32 ZBTB3 (ENSMICG00000009961) #33 TTC9C (ENSMICG00000042013) #34 HNRNPUL2 (ENSMICG00000009943) #35 GNG3 (ENSMICG00000028299) #36 Lemuriformes_a ANCESTRAL SPECIES 3 ENSGT00940000159437 ENSGT00940000161630 ENSGT00390000015815 ENSGT00940000162317 ENSGT00940000160034 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00390000008351 ENSGT00390000007071 ENSGT00390000011180 ENSGT00390000018613.b.s.a ENSGT00940000161375.b ENSGT00940000162437 ENSGT00940000162436 #21 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Coquerels sifaka MODERN SPECIES 124 EFEMP2 (ENSPCOG00000023038) CTSW (ENSPCOG00000015846) FIBP (ENSPCOG00000018954) CCDC85B (ENSPCOG00000002873) FOSL1 (ENSPCOG00000027454) C11orf68 (ENSPCOG00000003847) DRAP1 (ENSPCOG00000018977) TSGA10IP (ENSPCOG00000016636) SART1 (ENSPCOG00000008448) EIF1AD (ENSPCOG00000026199) BANF1 (ENSPCOG00000017573) CST6 (ENSPCOG00000014875) CATSPER1 (ENSPCOG00000017509) PLAAT5 (ENSPCOG00000014222) #21 SLC22A24 (ENSPCOG00000014735) SLC22A8 (ENSPCOG00000024141) #22 SLC22A6 (ENSPCOG00000017938) #23 CHRM1 (ENSPCOG00000013215) #24 SLC3A2 (ENSPCOG00000028096) #25 WDR74 (ENSPCOG00000024846) #26 TEX54 (ENSPCOG00000020742) STX5 (ENSPCOG00000024733) #27 NXF1 (ENSPCOG00000024446) #28 TMEM223 (ENSPCOG00000028275) #29 TMEM179B (ENSPCOG00000023933) #30 TAF6L (ENSPCOG00000017276) #31 POLR2G (ENSPCOG00000024131) #32 ZBTB3 (ENSPCOG00000020656) #33 TTC9C (ENSPCOG00000017839) #34 HNRNPUL2 (ENSPCOG00000013502) #35 GNG3 (ENSPCOG00000017973) #36 Greater bamboo lemur MODERN SPECIES 101 PLAAT5 (ENSPSMG00000023332) #21 SLC22A24 (ENSPSMG00000023328) SLC22A8 (ENSPSMG00000023317) #22 SLC22A6 (ENSPSMG00000023289) #23 ENSPSMG00000023261 CHRM1 (ENSPSMG00000023259) #24 SLC3A2 (ENSPSMG00000023235) #25 WDR74 (ENSPSMG00000023161) #26 STX5 (ENSPSMG00000023098) #27 NXF1 (ENSPSMG00000023076) #28 TMEM223 (ENSPSMG00000023035) #29 TMEM179B (ENSPSMG00000023026) #30 TAF6L (ENSPSMG00000023017) #31 POLR2G (ENSPSMG00000023003) #32 ZBTB3 (ENSPSMG00000022991) #33 ENSPSMG00000022990 HNRNPUL2 (ENSPSMG00000022973) #35 GNG3 (ENSPSMG00000022948) #36 Bushbaby MODERN SPECIES 255 DRAP1 (ENSOGAG00000016519) TSGA10IP (ENSOGAG00000016520) SART1 (ENSOGAG00000016523) EIF1AD (ENSOGAG00000016528) BANF1 (ENSOGAG00000016530) CST6 (ENSOGAG00000016534) CATSPER1 (ENSOGAG00000016536) LGALS12 (ENSOGAG00000009408) #20 ENSOGAG00000027568 PLAAT5 (ENSOGAG00000004581) #21 ENSOGAG00000003053 ENSOGAG00000029377 ENSOGAG00000003051 ENSOGAG00000030634 ENSOGAG00000006579 SLC22A8 (ENSOGAG00000003588) #22 SLC22A6 (ENSOGAG00000003585) #23 CHRM1 (ENSOGAG00000028685) #24 SLC3A2 (ENSOGAG00000027003) #25 WDR74 (ENSOGAG00000015303) #26 STX5 (ENSOGAG00000015298) #27 NXF1 (ENSOGAG00000008901) #28 TMEM223 (ENSOGAG00000024913) #29 TMEM179B (ENSOGAG00000008897) #30 TAF6L (ENSOGAG00000008893) #31 POLR2G (ENSOGAG00000032720) #32 ZBTB3 (ENSOGAG00000011414) #33 TTC9C (ENSOGAG00000003305) #34 HNRNPUL2 (ENSOGAG00000003302) #35 GNG3 (ENSOGAG00000034224) #36 BSCL2 (ENSOGAG00000025056) #37 Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Glires ANCESTRAL SPECIES 1 ENSGT00940000161450 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Rodentia ANCESTRAL SPECIES 1 ENSGT00940000161450 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Rodentia_B ANCESTRAL SPECIES 5 ENSGT00940000161450 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Myomorpha ANCESTRAL SPECIES 4 ENSGT00940000161450 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Muroidea ANCESTRAL SPECIES 2 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.c ENSGT00940000161239.d ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Muroidea_A ANCESTRAL SPECIES ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.c.b ENSGT00940000161239.c.a.a ENSGT00940000161239.d ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Cricetidae ANCESTRAL SPECIES 1 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.c.b ENSGT00940000161239.d ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Cricetinae ANCESTRAL SPECIES 2 ENSGT00940000161450 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.c.b ENSGT00940000161239.d ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646.j #25 ENSGT00940000156646.i #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Golden Hamster MODERN SPECIES 617 Cox8a (ENSMAUG00000015109) #9 Naa40 (ENSMAUG00000013206) #10 Rcor2 (ENSMAUG00000013529) #11 ENSMAUG00000013126 #12 ENSMAUG00000015638 ENSMAUG00000014179 #12 Spindoc (ENSMAUG00000013145) #13 Zfta (ENSMAUG00000013334) #14 ENSMAUG00000013612 #15 Atl3 (ENSMAUG00000014736) #16 Plaat3 (ENSMAUG00000013633) #17 Lgals12 (ENSMAUG00000014489) #20 Plaat5 (ENSMAUG00000013292) #21 Slc22a19 (ENSMAUG00000013315) ENSMAUG00000013367 Slc22a8 (ENSMAUG00000013177) #22 Slc22a6 (ENSMAUG00000013676) #23 Chrm1 (ENSMAUG00000013069) #24 ENSMAUG00000013060 #25 ENSMAUG00000013043 #25 Wdr74 (ENSMAUG00000012992) #26 Tex54 (ENSMAUG00000013004) Stx5a (ENSMAUG00000013701) #27 Nxf1 (ENSMAUG00000014572) #28 Tmem223 (ENSMAUG00000012961) #29 Tmem179b (ENSMAUG00000012885) #30 Taf6l (ENSMAUG00000015095) #31 Polr2g (ENSMAUG00000013079) #32 Zbtb3 (ENSMAUG00000013055) #33 Ttc9c (ENSMAUG00000013136) #34 Hnrnpul2 (ENSMAUG00000013163) #35 Chinese hamster chok1gshd MODERN SPECIES 401 Otub1 (ENSCGRG00001012395) #8 Cox8a (ENSCGRG00001024928) #9 ENSCGRG00001004057 #10 Rcor2 (ENSCGRG00001008621) #11 Mark2 (ENSCGRG00001010551) #12 Spindoc (ENSCGRG00001001090) #13 Zfta (ENSCGRG00001004358) #14 Rtn3 (ENSCGRG00001018871) #15 Atl3 (ENSCGRG00001018013) #16 Plaat3 (ENSCGRG00001007573) #17 Lgals12 (ENSCGRG00001010564) #20 Plaat5 (ENSCGRG00001019087) #21 Slc22a19 (ENSCGRG00001022436) ENSCGRG00001021584 ENSCGRG00001003608 Slc22a8 (ENSCGRG00001007311) #22 Slc22a6 (ENSCGRG00001015989) #23 Chrm1 (ENSCGRG00001002011) #24 Slc3a2 (ENSCGRG00001025072) #25 Wdr74 (ENSCGRG00001004246) #26 Tex54 (ENSCGRG00001012530) Stx5a (ENSCGRG00001018343) #27 Nxf1 (ENSCGRG00001013721) #28 Tmem223 (ENSCGRG00001023350) #29 Tmem179b (ENSCGRG00001025014) #30 Taf6l (ENSCGRG00001007467) #31 ENSCGRG00001022692 #32 Zbtb3 (ENSCGRG00001006797) #33 Ttc9c (ENSCGRG00001011015) #34 Hnrnpul2 (ENSCGRG00001017076) #35 Gng3 (ENSCGRG00001014012) #36 Cricetidae_B ANCESTRAL SPECIES 1 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.c.b ENSGT00940000161239.d ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Prairie vole MODERN SPECIES 16 Cox8a (ENSMOCG00000002916) #9 Naa40 (ENSMOCG00000014326) #10 Rcor2 (ENSMOCG00000001766) #11 Mark2 (ENSMOCG00000015697) #12 Spindoc (ENSMOCG00000016927) #13 ENSMOCG00000016523 #14 ENSMOCG00000001558 #15 Atl3 (ENSMOCG00000014305) #16 Plaat3 (ENSMOCG00000016945) #17 Lgals12 (ENSMOCG00000019635) #20 Plaat5 (ENSMOCG00000016896) #21 Slc22a19 (ENSMOCG00000020438) ENSMOCG00000001921 ENSMOCG00000019218 ENSMOCG00000002914 Slc22a8 (ENSMOCG00000011371) #22 Slc22a6 (ENSMOCG00000021104) #23 Chrm1 (ENSMOCG00000002497) #24 ENSMOCG00000009004 #25 ENSMOCG00000003857 #26 Tex54 (ENSMOCG00000020857) Stx5a (ENSMOCG00000021699) #27 Nxf1 (ENSMOCG00000000939) #28 Tmem223 (ENSMOCG00000010044) #29 Tmem179b (ENSMOCG00000012843) #30 Taf6l (ENSMOCG00000019616) #31 Polr2g (ENSMOCG00000010638) #32 Zbtb3 (ENSMOCG00000002963) #33 Ttc9c (ENSMOCG00000019481) #34 Hnrnpul2 (ENSMOCG00000020000) #35 Gng3 (ENSMOCG00000020628) #36 Northern American deer mouse MODERN SPECIES Rcor2 (ENSPEMG00000018762) #11 Mark2 (ENSPEMG00000004482) #12 Spindoc (ENSPEMG00000005634) #13 Zfta (ENSPEMG00000015536) #14 ENSPEMG00000006921 #15 Atl3 (ENSPEMG00000017714) #16 Plaat3 (ENSPEMG00000015751) #17 Lgals12 (ENSPEMG00000002696) #20 Plaat5 (ENSPEMG00000007949) #21 ENSPEMG00000030267 Slc22a19 (ENSPEMG00000011237) ENSPEMG00000025385 ENSPEMG00000017469 ENSPEMG00000025227 ENSPEMG00000008490 Slc22a8 (ENSPEMG00000005685) #22 Slc22a6 (ENSPEMG00000010064) #23 ENSPEMG00000024846 Chrm1 (ENSPEMG00000027279) #24 Slc3a2 (ENSPEMG00000017251) #25 Wdr74 (ENSPEMG00000008678) #26 Tex54 (ENSPEMG00000012036) Stx5a (ENSPEMG00000017791) #27 Nxf1 (ENSPEMG00000006139) #28 Tmem223 (ENSPEMG00000017084) #29 Tmem179b (ENSPEMG00000011859) #30 Taf6l (ENSPEMG00000011799) #31 Polr2g (ENSPEMG00000000685) #32 Zbtb3 (ENSPEMG00000018613) #33 Ttc9c (ENSPEMG00000026108) #34 Hnrnpul2 (ENSPEMG00000015546) #35 Murinae ANCESTRAL SPECIES ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.c.b ENSGT00940000161239.d ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 Mus ANCESTRAL SPECIES ENSGT00940000161450 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.c.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 Mus_A ANCESTRAL SPECIES 16 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.c.b ENSGT00940000161239.d ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 Mus_B ANCESTRAL SPECIES 16 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.c.b ENSGT00940000161239.c.a.a ENSGT00940000161239.d ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 Mouse MODERN SPECIES 10 Rcor2 (ENSMUSG00000024968) #11 Mark2 (ENSMUSG00000024969) #12 Spindoc (ENSMUSG00000024970) #13 Zfta (ENSMUSG00000053080) #14 Rtn3 (ENSMUSG00000024758) #15 Atl3 (ENSMUSG00000024759) #16 Plaat3 (ENSMUSG00000060675) #17 Lgals12 (ENSMUSG00000024972) #20 Plaat5 (ENSMUSG00000024973) #21 Slc22a19 (ENSMUSG00000024757) Slc22a26 (ENSMUSG00000053303) Slc22a27 (ENSMUSG00000067656) Slc22a28 (ENSMUSG00000063590) Slc22a29 (ENSMUSG00000075044) Slc22a30 (ENSMUSG00000052562) Slc22a8 (ENSMUSG00000063796) #22 Slc22a6 (ENSMUSG00000024650) #23 Chrm1 (ENSMUSG00000032773) #24 Slc3a2 (ENSMUSG00000010095) #25 Wdr74 (ENSMUSG00000042729) #26 Tex54 (ENSMUSG00000090840) Stx5a (ENSMUSG00000010110) #27 Nxf1 (ENSMUSG00000010097) #28 Tmem223 (ENSMUSG00000117924) #29 Tmem179b (ENSMUSG00000118346) #30 Taf6l (ENSMUSG00000003680) #31 Polr2g (ENSMUSG00000071662) #32 Zbtb3 (ENSMUSG00000071661) #33 Ttc9c (ENSMUSG00000071660) #34 Hnrnpul2 (ENSMUSG00000071659) #35 Gng3 (ENSMUSG00000071658) #36 Mus_C ANCESTRAL SPECIES 25 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.c.b ENSGT00940000161239.c.a.a ENSGT00940000161239.d ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 spretus MODERN SPECIES 10 Flrt1 (MGP_SPRETEiJ_G0023541) #7 Otub1 (MGP_SPRETEiJ_G0023542) #8 Cox8a (MGP_SPRETEiJ_G0023543) #9 Naa40 (MGP_SPRETEiJ_G0023544) #10 Rcor2 (MGP_SPRETEiJ_G0023545) #11 Mark2 (MGP_SPRETEiJ_G0023546) #12 Spindoc (MGP_SPRETEiJ_G0023547) #13 Zfta (MGP_SPRETEiJ_G0023548) #14 Rtn3 (MGP_SPRETEiJ_G0023549) #15 Atl3 (MGP_SPRETEiJ_G0023550) #16 Plaat3 (MGP_SPRETEiJ_G0023551) #17 Lgals12 (MGP_SPRETEiJ_G0023552) #20 MGP_SPRETEiJ_G0023553 #21 Slc22a19 (MGP_SPRETEiJ_G0023554) MGP_SPRETEiJ_G0023555 Slc22a8 (MGP_SPRETEiJ_G0023557) #22 Slc22a6 (MGP_SPRETEiJ_G0023558) #23 Chrm1 (MGP_SPRETEiJ_G0023559) #24 Slc3a2 (MGP_SPRETEiJ_G0023560) #25 Wdr74 (MGP_SPRETEiJ_G0023561) #26 Tex54 (MGP_SPRETEiJ_G0023562) Stx5a (MGP_SPRETEiJ_G0023563) #27 Taf6l (MGP_SPRETEiJ_G0023565) #31 Polr2g (MGP_SPRETEiJ_G0023566) #32 Zbtb3 (MGP_SPRETEiJ_G0023567) #33 Ttc9c (MGP_SPRETEiJ_G0023568) #34 Hnrnpul2 (MGP_SPRETEiJ_G0023569) #35 Gng3 (MGP_SPRETEiJ_G0023570) #36 Bscl2 (MGP_SPRETEiJ_G0023571) #37 Lrrn4cl (MGP_SPRETEiJ_G0023572) Ubxn1 (MGP_SPRETEiJ_G0023573) Steppe mouse MODERN SPECIES 2426 ENSMSIG00000031185 Slc22a8 (ENSMSIG00000031186) #22 Slc22a6 (ENSMSIG00000031188) #23 Chrm1 (ENSMSIG00000031191) #24 Slc3a2 (ENSMSIG00000031194) #25 Wdr74 (ENSMSIG00000031207) #26 Tex54 (ENSMSIG00000031210) ENSMSIG00000031211 #27 Nxf1 (ENSMSIG00000031212) #28 Tmem223 (ENSMSIG00000031214) #29 Tmem179b (ENSMSIG00000031215) #30 Taf6l (ENSMSIG00000031216) #31 Polr2g (ENSMSIG00000031217) #32 Zbtb3 (ENSMSIG00000031218) #33 Ttc9c (ENSMSIG00000031219) #34 Hnrnpul2 (ENSMSIG00000031220) #35 Gng3 (ENSMSIG00000031221) #36 Ryukyu mouse MODERN SPECIES 10 Stip1 (MGP_CAROLIEiJ_G0022629) Macrod1 (MGP_CAROLIEiJ_G0022630) Flrt1 (MGP_CAROLIEiJ_G0022631) #7 MGP_CAROLIEiJ_G0022632 #8 Cox8a (MGP_CAROLIEiJ_G0022633) #9 Naa40 (MGP_CAROLIEiJ_G0022634) #10 Rcor2 (MGP_CAROLIEiJ_G0022635) #11 Mark2 (MGP_CAROLIEiJ_G0022636) #12 Spindoc (MGP_CAROLIEiJ_G0022637) #13 Zfta (MGP_CAROLIEiJ_G0022638) #14 Rtn3 (MGP_CAROLIEiJ_G0022639) #15 Atl3 (MGP_CAROLIEiJ_G0022640) #16 Plaat3 (MGP_CAROLIEiJ_G0022641) #17 Lgals12 (MGP_CAROLIEiJ_G0022642) #20 MGP_CAROLIEiJ_G0022643 #21 Slc22a8 (MGP_CAROLIEiJ_G0022644) #22 Slc22a6 (MGP_CAROLIEiJ_G0022645) #23 Chrm1 (MGP_CAROLIEiJ_G0022646) #24 Slc3a2 (MGP_CAROLIEiJ_G0022647) #25 Wdr74 (MGP_CAROLIEiJ_G0022648) #26 Tex54 (MGP_CAROLIEiJ_G0022649) Stx5a (MGP_CAROLIEiJ_G0022650) #27 Nxf1 (MGP_CAROLIEiJ_G0022651) #28 Tmem179b (MGP_CAROLIEiJ_G0022652) #30 Polr2g (MGP_CAROLIEiJ_G0022653) #32 Zbtb3 (MGP_CAROLIEiJ_G0022654) #33 Ttc9c (MGP_CAROLIEiJ_G0022655) #34 Hnrnpul2 (MGP_CAROLIEiJ_G0022656) #35 Gng3 (MGP_CAROLIEiJ_G0022657) #36 Bscl2 (MGP_CAROLIEiJ_G0022658) #37 Lrrn4cl (MGP_CAROLIEiJ_G0022659) Shrew mouse MODERN SPECIES Macrod1 (MGP_PahariEiJ_G0014124) Flrt1 (MGP_PahariEiJ_G0014125) #7 Otub1 (MGP_PahariEiJ_G0014126) #8 Cox8a (MGP_PahariEiJ_G0014127) #9 Naa40 (MGP_PahariEiJ_G0014128) #10 Rcor2 (MGP_PahariEiJ_G0014129) #11 Mark2 (MGP_PahariEiJ_G0014130) #12 Spindoc (MGP_PahariEiJ_G0014131) #13 Zfta (MGP_PahariEiJ_G0014132) #14 Rtn3 (MGP_PahariEiJ_G0014133) #15 Atl3 (MGP_PahariEiJ_G0014134) #16 Plaat3 (MGP_PahariEiJ_G0014135) #17 Lgals12 (MGP_PahariEiJ_G0014136) #20 MGP_PahariEiJ_G0014137 #21 MGP_PahariEiJ_G0014138 Slc22a8 (MGP_PahariEiJ_G0014139) #22 Slc22a6 (MGP_PahariEiJ_G0014140) #23 Chrm1 (MGP_PahariEiJ_G0014141) #24 Slc3a2 (MGP_PahariEiJ_G0014142) #25 Wdr74 (MGP_PahariEiJ_G0014143) #26 Tex54 (MGP_PahariEiJ_G0014144) MGP_PahariEiJ_G0014145 #27 Nxf1 (MGP_PahariEiJ_G0014146) #28 Taf6l (MGP_PahariEiJ_G0014147) #31 Polr2g (MGP_PahariEiJ_G0014148) #32 Zbtb3 (MGP_PahariEiJ_G0014149) #33 Ttc9c (MGP_PahariEiJ_G0014150) #34 Hnrnpul2 (MGP_PahariEiJ_G0014151) #35 Gng3 (MGP_PahariEiJ_G0014152) #36 Bscl2 (MGP_PahariEiJ_G0014153) #37 Lrrn4cl (MGP_PahariEiJ_G0014154) Rat MODERN SPECIES Rcor2 (ENSRNOG00000060849) #11 Mark2 (ENSRNOG00000021184) #12 Spindoc (ENSRNOG00000025061) #13 Zfta (ENSRNOG00000032042) #14 Rtn3 (ENSRNOG00000021202) #15 Atl3 (ENSRNOG00000021203) #16 ENSRNOG00000066743 Plaat3 (ENSRNOG00000021206) #17 Lgals12 (ENSRNOG00000021207) #20 Plaat5 (ENSRNOG00000023528) #21 Slc22a24 (ENSRNOG00000056396) Dnajb6-ps10 (ENSRNOG00000017884) UST4r (ENSRNOG00000049826) Ust5r (ENSRNOG00000061890) Slc22a25 (ENSRNOG00000017964) Slc22a8 (ENSRNOG00000018086) #22 Slc22a6 (ENSRNOG00000018215) #23 Chrm1 (ENSRNOG00000018385) #24 Slc3a2 (ENSRNOG00000018487) #25 LOC690251 (ENSRNOG00000029315) Wdr74 (ENSRNOG00000042878) #26 LOC120099984 (ENSRNOG00000063481) Stx5 (ENSRNOG00000018847) #27 Nxf1 (ENSRNOG00000019069) #28 Tmem223 (ENSRNOG00000019266) #29 Tmem179b (ENSRNOG00000019341) #30 Taf6l (ENSRNOG00000019419) #31 Zbtb3 (ENSRNOG00000019461) #33 Polr2g (ENSRNOG00000019439) #32 Ttc9c (ENSRNOG00000019464) #34 Hnrnpul2 (ENSRNOG00000019507) Upper Galilee mountains blind mole rat MODERN SPECIES 993 ENSNGAG00000006190 Slc22a8 (ENSNGAG00000017037) #22 Slc22a6 (ENSNGAG00000017578) #23 Chrm1 (ENSNGAG00000002773) #24 ENSNGAG00000014580 #25 Wdr74 (ENSNGAG00000018778) #26 ENSNGAG00000017211 #27 ENSNGAG00000011098 #27 Nxf1 (ENSNGAG00000001539) #28 Tmem223 (ENSNGAG00000013203) #29 Tmem179b (ENSNGAG00000019915) #30 Taf6l (ENSNGAG00000020944) #31 Polr2g (ENSNGAG00000020624) #32 Zbtb3 (ENSNGAG00000004122) #33 Ttc9c (ENSNGAG00000010773) #34 Hnrnpul2 (ENSNGAG00000012005) #35 Gng3 (ENSNGAG00000017324) #36 Lesser Egyptian jerboa MODERN SPECIES 60 Macrod1 (ENSJJAG00000010697) Otub1 (ENSJJAG00000017403) #8 Cox8a (ENSJJAG00000022271) #9 Naa40 (ENSJJAG00000010926) #10 Rcor2 (ENSJJAG00000000799) #11 Mark2 (ENSJJAG00000018612) #12 Spindoc (ENSJJAG00000014147) #13 Zfta (ENSJJAG00000019968) #14 ENSJJAG00000016262 #15 ENSJJAG00000006253 #16 ENSJJAG00000017667 Plaat3 (ENSJJAG00000021915) #17 Lgals12 (ENSJJAG00000014881) #20 Plaat5 (ENSJJAG00000020253) #21 ENSJJAG00000010614 Slc22a8 (ENSJJAG00000023072) #22 Slc22a6 (ENSJJAG00000009093) #23 Chrm1 (ENSJJAG00000013856) #24 ENSJJAG00000001125 #25 Wdr74 (ENSJJAG00000001449) #26 Stx5a (ENSJJAG00000023191) #27 Nxf1 (ENSJJAG00000017480) #28 Tmem223 (ENSJJAG00000020948) #29 Tmem179b (ENSJJAG00000010561) #30 Taf6l (ENSJJAG00000017255) #31 ENSJJAG00000009540 Polr2g (ENSJJAG00000005019) #32 Zbtb3 (ENSJJAG00000024243) #33 ENSJJAG00000008957 #34 Hnrnpul2 (ENSJJAG00000011206) #35 Gng3 (ENSJJAG00000015400) #36 Kangaroo rat MODERN SPECIES 436 Slc22a8 (ENSDORG00000014299) #22 Slc22a6 (ENSDORG00000008272) #23 Chrm1 (ENSDORG00000014333) #24 ENSDORG00000010523 #25 ENSDORG00000023609 #25 Wdr74 (ENSDORG00000030180) #26 ENSDORG00000026362 ENSDORG00000025630 Nxf1 (ENSDORG00000015692) #28 Tmem223 (ENSDORG00000015693) #29 ENSDORG00000029410 #30 ENSDORG00000015695 #31 ENSDORG00000015696 #32 Zbtb3 (ENSDORG00000015697) #33 Ttc9c (ENSDORG00000028105) #34 Hnrnpul2 (ENSDORG00000008678) #35 Rodentia_A ANCESTRAL SPECIES 1 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000164763 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Sciuridae ANCESTRAL SPECIES 40 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000164763 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Marmotini ANCESTRAL SPECIES 6 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c.d.b.b #18 ENSGT00940000154853.c.c.a #18 ENSGT00940000162878 #19 ENSGT00940000154853.c.d.b.a.a #18 ENSGT00940000162436 #21 ENSGT00940000164763.e ENSGT00940000164763.f ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Marmotini_b ANCESTRAL SPECIES 21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 Squirrel MODERN SPECIES 181 SLC22A8 (ENSSTOG00000007893) #22 SLC22A6 (ENSSTOG00000007863) #23 CHRM1 (ENSSTOG00000004514) #24 ENSSTOG00000004495 #25 WDR74 (ENSSTOG00000028814) #26 ENSSTOG00000031064 STX5 (ENSSTOG00000004487) #27 NXF1 (ENSSTOG00000004463) #28 TMEM179B (ENSSTOG00000004436) #30 TMEM223 (ENSSTOG00000004451) #29 TAF6L (ENSSTOG00000004406) #31 POLR2G (ENSSTOG00000004391) #32 ZBTB3 (ENSSTOG00000027839) #33 TTC9C (ENSSTOG00000004352) #34 HNRNPUL2 (ENSSTOG00000004327) #35 GNG3 (ENSSTOG00000001052) #36 Arctic ground squirrel MODERN SPECIES 366 SLC22A8 (ENSUPAG00010005520) #22 SLC22A6 (ENSUPAG00010005504) #23 CHRM1 (ENSUPAG00010005493) #24 SLC3A2 (ENSUPAG00010005472) #25 WDR74 (ENSUPAG00010005413) #26 ENSUPAG00010005405 NXF1 (ENSUPAG00010005335) #28 TMEM223 (ENSUPAG00010005332) #29 TMEM179B (ENSUPAG00010005330) #30 TAF6L (ENSUPAG00010005260) #31 ENSUPAG00010005242 #32 ZBTB3 (ENSUPAG00010005239) #33 TTC9C (ENSUPAG00010005227) #34 HNRNPUL2 (ENSUPAG00010005211) #35 GNG3 (ENSUPAG00010005209) #36 BSCL2 (ENSUPAG00010005172) #37 Alpin marmot MODERN SPECIES 3 ENSMMMG00000006663 #19 ENSMMMG00000006652 #18 ENSMMMG00000006645 ENSMMMG00000006639 #18 PLAAT5 (ENSMMMG00000006630) #21 ENSMMMG00000005778 ENSMMMG00000005768 ENSMMMG00000004981 ENSMMMG00000004930 ENSMMMG00000004924 ENSMMMG00000004907 ENSMMMG00000004851 ENSMMMG00000003825 ENSMMMG00000003776 ENSMMMG00000003769 SLC22A8 (ENSMMMG00000003731) #22 SLC22A6 (ENSMMMG00000003706) #23 ENSMMMG00000003700 CHRM1 (ENSMMMG00000003694) #24 SLC3A2 (ENSMMMG00000003678) #25 WDR74 (ENSMMMG00000003523) #26 STX5 (ENSMMMG00000003474) #27 NXF1 (ENSMMMG00000003452) #28 TMEM223 (ENSMMMG00000003447) #29 TMEM179B (ENSMMMG00000003438) #30 TAF6L (ENSMMMG00000003387) #31 POLR2G (ENSMMMG00000003372) #32 ZBTB3 (ENSMMMG00000003369) #33 TTC9C (ENSMMMG00000003362) #34 HNRNPUL2 (ENSMMMG00000002784) #35 GNG3 (ENSMMMG00000002755) #36 Eurasian red squirrel MODERN SPECIES 2 ENSSVLG00005022993 ENSSVLG00005023561 ENSSVLG00005023580 ENSSVLG00005023641 ENSSVLG00005023714 ENSSVLG00005023731 ENSSVLG00005023766 ENSSVLG00005023808 ENSSVLG00005023863 ENSSVLG00005024051 ENSSVLG00005024076 ENSSVLG00005024264 SLC22A24 (ENSSVLG00005024838) ENSSVLG00005024877 ENSSVLG00005024903 SLC22A8 (ENSSVLG00005024944) #22 SLC22A6 (ENSSVLG00005024995) #23 ENSSVLG00005025007 CHRM1 (ENSSVLG00005025022) #24 SLC3A2 (ENSSVLG00005025047) #25 WDR74 (ENSSVLG00005004863) #26 STX5 (ENSSVLG00005004935) #27 NXF1 (ENSSVLG00005004975) #28 TMEM223 (ENSSVLG00005005000) #29 TMEM179B (ENSSVLG00005005020) #30 TAF6L (ENSSVLG00005005050) #31 POLR2G (ENSSVLG00005005070) #32 ZBTB3 (ENSSVLG00005005114) #33 TTC9C (ENSSVLG00005005141) #34 HNRNPUL2 (ENSSVLG00005005186) #35 BSCL2 (ENSSVLG00005005272) #37 Hystricomorpha ANCESTRAL SPECIES 37 ENSGT00940000162436 #21 ENSGT00940000161499 #20 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 ENSGT00390000011639 #37 Hystricomorpha_a ANCESTRAL SPECIES 44 ENSGT00940000161499 #20 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 ENSGT00390000011639 #37 Guinea pig MODERN SPECIES 44 ENSCPOG00000034332 ENSCPOG00000035995 ENSCPOG00000035220 ENSCPOG00000034087 ENSCPOG00000038081 ENSCPOG00000040732 ENSCPOG00000030540 ENSCPOG00000024812 OR5AS1 (ENSCPOG00000002762) ENSCPOG00000035549 ENSCPOG00000024576 ENSCPOG00000003501 ENSCPOG00000031316 ENSCPOG00000021873 LGALS12 (ENSCPOG00000001729) #20 SLC22A8 (ENSCPOG00000007880) #22 SLC22A6 (ENSCPOG00000015195) #23 CHRM1 (ENSCPOG00000000307) #24 SLC3A2 (ENSCPOG00000013152) #25 WDR74 (ENSCPOG00000008305) #26 STX5 (ENSCPOG00000030304) #27 NXF1 (ENSCPOG00000006126) #28 TMEM223 (ENSCPOG00000006124) #29 TMEM179B (ENSCPOG00000006121) #30 TAF6L (ENSCPOG00000002702) #31 POLR2G (ENSCPOG00000036420) #32 ZBTB3 (ENSCPOG00000011665) #33 TTC9C (ENSCPOG00000031200) #34 ENSCPOG00000000739 GNG3 (ENSCPOG00000040497) #36 LRRN4CL (ENSCPOG00000036188) Hystricomorpha_b ANCESTRAL SPECIES 80 ENSGT00940000161499 #20 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 ENSGT00390000011639 #37 Long-tailed chinchilla MODERN SPECIES 306 LGALS12 (ENSCLAG00000000294) #20 SLC22A8 (ENSCLAG00000000390) #22 SLC22A6 (ENSCLAG00000001057) #23 CHRM1 (ENSCLAG00000000446) #24 SLC3A2 (ENSCLAG00000000468) #25 WDR74 (ENSCLAG00000000627) #26 STX5 (ENSCLAG00000000665) #27 NXF1 (ENSCLAG00000001490) #28 TMEM223 (ENSCLAG00000000343) #29 TMEM179B (ENSCLAG00000000362) #30 TAF6L (ENSCLAG00000000112) #31 POLR2G (ENSCLAG00000000802) #32 ZBTB3 (ENSCLAG00000000861) #33 TTC9C (ENSCLAG00000000902) #34 HNRNPUL2 (ENSCLAG00000000417) #35 LRRN4CL (ENSCLAG00000000228) GNG3 (ENSCLAG00000000268) #36 Degu MODERN SPECIES 320 ENSODEG00000002375 ENSODEG00000002413 LGALS12 (ENSODEG00000002489) #20 SLC22A8 (ENSODEG00000002518) #22 SLC22A6 (ENSODEG00000002780) #23 CHRM1 (ENSODEG00000018978) #24 SLC3A2 (ENSODEG00000003055) #25 WDR74 (ENSODEG00000003132) #26 STX5 (ENSODEG00000003162) #27 NXF1 (ENSODEG00000001620) #28 TMEM223 (ENSODEG00000001739) #29 TAF6L (ENSODEG00000001781) #31 ENSODEG00000018748 ENSODEG00000002048 #32 HNRNPUL2 (ENSODEG00000002142) #35 TTC9C (ENSODEG00000002308) #34 GNG3 (ENSODEG00000002315) #36 UBXN1 (ENSODEG00000002987) UQCC3 (ENSODEG00000003020) Naked mole-rat female MODERN SPECIES 14 ENSHGLG00000011456 SLC39A13 (ENSHGLG00000041087) PSMC3 (ENSHGLG00000005713) RAPSN (ENSHGLG00000008521) ENSHGLG00000006909 ENSHGLG00000037048 KBTBD4 (ENSHGLG00000047234) NDUFS3 (ENSHGLG00000018368) FAM180B (ENSHGLG00000038229) MTCH2 (ENSHGLG00000017536) ENSHGLG00000043784 ENSHGLG00000008506 ENSHGLG00000039374 ENSHGLG00000041936 #21 ENSHGLG00000003580 #20 ENSHGLG00000003320 #22 SLC22A6 (ENSHGLG00000003133) #23 CHRM1 (ENSHGLG00000040030) #24 SLC3A2 (ENSHGLG00000004557) #25 WDR74 (ENSHGLG00000003751) #26 STX5 (ENSHGLG00000003553) #27 NXF1 (ENSHGLG00000002936) #28 TMEM223 (ENSHGLG00000034690) #29 TAF6L (ENSHGLG00000005590) #31 POLR2G (ENSHGLG00000004851) #32 ZBTB3 (ENSHGLG00000032180) #33 ENSHGLG00000038212 HNRNPUL2 (ENSHGLG00000003285) #35 GNG3 (ENSHGLG00000038630) #36 BSCL2 (ENSHGLG00000002887) #37 ENSHGLG00000038756 Lagomorpha ANCESTRAL SPECIES 161 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00940000175551 ENSGT00980000200147 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000156646 #25 ENSGT00390000015119 #26 Pika MODERN SPECIES 4431 ENSOPRG00000011712 #22 ENSOPRG00000011693 #23 Laurasiatheria ANCESTRAL SPECIES 1 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000154901.C.b.e #22 Common shrew MODERN SPECIES 3496 ENSSARG00000012465 #22 Hedgehog MODERN SPECIES 4547 SLC22A8 (ENSEEUG00000008309) #22 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Artiodactyla ANCESTRAL SPECIES 1 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162660.b.e.b ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.a.a ENSGT00940000161239.k.a.b ENSGT00940000161239.k.b ENSGT00940000163667.a ENSGT00940000163667.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Suina ANCESTRAL SPECIES 14 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.a.a ENSGT00940000161239.k.a.b ENSGT00940000161239.k.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT01090000260892 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Chacoan peccary MODERN SPECIES 920 COX8A (ENSCWAG00000015938) #9 NAA40 (ENSCWAG00000015970) #10 RCOR2 (ENSCWAG00000016039) #11 MARK2 (ENSCWAG00000016084) #12 SPINDOC (ENSCWAG00000016361) #13 ZFTA (ENSCWAG00000016412) #14 RTN3 (ENSCWAG00000016492) #15 ATL3 (ENSCWAG00000016882) #16 PLAAT3 (ENSCWAG00000016923) #17 PLAAT4 (ENSCWAG00000016973) #19 LGALS12 (ENSCWAG00000017018) #20 ENSCWAG00000017126 PLAAT5 (ENSCWAG00000017146) #21 SLC22A9 (ENSCWAG00000017234) ENSCWAG00000017311 SLC22A8 (ENSCWAG00000017452) #22 SLC22A6 (ENSCWAG00000017692) #23 ENSCWAG00000018111 CHRM1 (ENSCWAG00000018122) #24 SLC3A2 (ENSCWAG00000018136) #25 WDR74 (ENSCWAG00000018241) #26 STX5 (ENSCWAG00000018346) #27 NXF1 (ENSCWAG00000018375) #28 TMEM223 (ENSCWAG00000018420) #29 TMEM179B (ENSCWAG00000018442) #30 TAF6L (ENSCWAG00000018470) #31 POLR2G (ENSCWAG00000018485) #32 ZBTB3 (ENSCWAG00000018506) #33 TTC9C (ENSCWAG00000018515) #34 HNRNPUL2 (ENSCWAG00000018533) #35 BSCL2 (ENSCWAG00000018615) #37 Pig MODERN SPECIES 10 SPINDOC (ENSSSCG00000013048) #13 ENSSSCG00000013051 ZFTA (ENSSSCG00000031666) #14 ENSSSCG00000013052 #15 ATL3 (ENSSSCG00000013054) #16 PLAAT3 (ENSSSCG00000026914) #17 LGALS12 (ENSSSCG00000013056) #20 PLAAT5 (ENSSSCG00000061988) #21 ENSSSCG00000013057 ENSSSCG00000027453 ENSSSCG00000028537 ENSSSCG00000029248 ENSSSCG00000060619 ENSSSCG00000061902 ENSSSCG00000025413 SLC22A8 (ENSSSCG00000029516) #22 SLC22A6 (ENSSSCG00000023571) #23 ENSSSCG00000040074 SLC3A2 (ENSSSCG00000022404) #25 WDR74 (ENSSSCG00000028025) #26 TEX54 (ENSSSCG00000045572) STX5 (ENSSSCG00000026293) #27 NXF1 (ENSSSCG00000022866) #28 TMEM223 (ENSSSCG00000038711) #29 TMEM179B (ENSSSCG00000032696) #30 TAF6L (ENSSSCG00000020665) #31 POLR2G (ENSSSCG00000025571) #32 ENSSSCG00000037745 #33 TTC9C (ENSSSCG00000035472) #34 HNRNPUL2 (ENSSSCG00000028542) #35 BSCL2 (ENSSSCG00000020823) #37 Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.a.a ENSGT00940000161239.k.a.b ENSGT00940000161239.k.b ENSGT00940000163667.a ENSGT00940000163667.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.a.a ENSGT00940000161239.k.a.b ENSGT00940000161239.k.b ENSGT00940000163667.a ENSGT00940000163667.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Cetacea ANCESTRAL SPECIES 4 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b.c #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.b ENSGT00940000163667.b ENSGT00940000163667.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01090000260892 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Odontoceti ANCESTRAL SPECIES 4 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b.c #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.b ENSGT00940000163667.a ENSGT00940000163667.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01090000260892 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805.m #34 ENSGT00940000160376 #35 Odontoceti_a ANCESTRAL SPECIES 4 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b.c #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.b ENSGT00940000163667.a ENSGT00940000163667.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01090000260892 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805.m #34 ENSGT00940000160376 #35 Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b.c #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.b ENSGT00940000163667.a ENSGT00940000163667.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01090000260892 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805.m #34 ENSGT00940000160376 #35 Monodontidae ANCESTRAL SPECIES 2 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b.c #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.b ENSGT00940000163667.a ENSGT00940000163667.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01090000260892 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805.m #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 Narwhal MODERN SPECIES 314 ENSMMNG00015017860 #8 COX8A (ENSMMNG00015017831) #9 NAA40 (ENSMMNG00015017755) #10 RCOR2 (ENSMMNG00015017683) #11 MARK2 (ENSMMNG00015017076) #12 SPINDOC (ENSMMNG00015016898) #13 ZFTA (ENSMMNG00015016857) #14 RTN3 (ENSMMNG00015016643) #15 ATL3 (ENSMMNG00015016525) #16 PLAAT3 (ENSMMNG00015016480) #17 LGALS12 (ENSMMNG00015016331) #20 ENSMMNG00015016290 #21 SLC22A9 (ENSMMNG00015016223) ENSMMNG00015016196 ENSMMNG00015016169 SLC22A8 (ENSMMNG00015015986) #22 SLC22A6 (ENSMMNG00015015915) #23 ENSMMNG00015015886 SLC3A2 (ENSMMNG00015020226) #25 WDR74 (ENSMMNG00015020091) #26 STX5 (ENSMMNG00015019992) #27 NXF1 (ENSMMNG00015019918) #28 TMEM223 (ENSMMNG00015019880) #29 TMEM179B (ENSMMNG00015019852) #30 TAF6L (ENSMMNG00015019824) #31 POLR2G (ENSMMNG00015019791) #32 ZBTB3 (ENSMMNG00015019770) #33 TTC9C (ENSMMNG00015019753) #34 HNRNPUL2 (ENSMMNG00015019703) #35 GNG3 (ENSMMNG00015019682) #36 BSCL2 (ENSMMNG00015019637) #37 Beluga whale MODERN SPECIES 7 COX8A (ENSDLEG00000016831) #9 NAA40 (ENSDLEG00000016844) #10 RCOR2 (ENSDLEG00000016867) #11 MARK2 (ENSDLEG00000016893) #12 CUNH11orf84 (ENSDLEG00000016974) #13 ZFTA (ENSDLEG00000017003) #14 RTN3 (ENSDLEG00000017027) #15 ATL3 (ENSDLEG00000017041) #16 PLAAT3 (ENSDLEG00000017064) #17 LGALS12 (ENSDLEG00000017077) #20 ENSDLEG00000017093 ENSDLEG00000017101 #21 SLC22A9 (ENSDLEG00000017119) ENSDLEG00000017168 ENSDLEG00000017182 SLC22A8 (ENSDLEG00000017206) #22 SLC22A6 (ENSDLEG00000017243) #23 ENSDLEG00000017288 CHRM1 (ENSDLEG00000017296) #24 SLC3A2 (ENSDLEG00000017306) #25 WDR74 (ENSDLEG00000017431) #26 STX5 (ENSDLEG00000017563) #27 NXF1 (ENSDLEG00000017803) #28 TMEM223 (ENSDLEG00000018313) #29 TMEM179B (ENSDLEG00000018318) #30 TAF6L (ENSDLEG00000018328) #31 POLR2G (ENSDLEG00000018335) #32 ZBTB3 (ENSDLEG00000018348) #33 TTC9C (ENSDLEG00000018352) #34 HNRNPUL2 (ENSDLEG00000018363) #35 GNG3 (ENSDLEG00000018479) #36 Vaquita MODERN SPECIES 19 FLRT1 (ENSPSNG00000004816) #7 MACROD1 (ENSPSNG00000004769) OTUB1 (ENSPSNG00000004699) #8 COX8A (ENSPSNG00000004670) #9 NAA40 (ENSPSNG00000004631) #10 RCOR2 (ENSPSNG00000004582) #11 MARK2 (ENSPSNG00000004479) #12 SPINDOC (ENSPSNG00000004396) #13 ZFTA (ENSPSNG00000004374) #14 RTN3 (ENSPSNG00000004269) #15 ATL3 (ENSPSNG00000004187) #16 LGALS12 (ENSPSNG00000020749) #20 SLC22A9 (ENSPSNG00000020492) ENSPSNG00000020456 ENSPSNG00000020372 SLC22A8 (ENSPSNG00000020185) #22 SLC22A6 (ENSPSNG00000019972) #23 ENSPSNG00000019902 #23 ENSPSNG00000019881 CHRM1 (ENSPSNG00000019868) #24 SLC3A2 (ENSPSNG00000019788) #25 WDR74 (ENSPSNG00000019672) #26 NXF1 (ENSPSNG00000019489) #28 TMEM223 (ENSPSNG00000019439) #29 TMEM179B (ENSPSNG00000019377) #30 TAF6L (ENSPSNG00000019327) #31 POLR2G (ENSPSNG00000019278) #32 ZBTB3 (ENSPSNG00000019250) #33 TTC9C (ENSPSNG00000019225) #34 HNRNPUL2 (ENSPSNG00000019048) #35 GNG3 (ENSPSNG00000019000) #36 Dolphin MODERN SPECIES 2428 SLC22A8 (ENSTTRG00000002488) #22 SLC22A6 (ENSTTRG00000002487) #23 SLC3A2 (ENSTTRG00000002485) #25 WDR74 (ENSTTRG00000002484) #26 STX5 (ENSTTRG00000002483) #27 NXF1 (ENSTTRG00000002482) #28 TMEM223 (ENSTTRG00000002481) #29 TMEM179B (ENSTTRG00000002480) #30 TAF6L (ENSTTRG00000002479) #31 POLR2G (ENSTTRG00000002478) #32 ZBTB3 (ENSTTRG00000002477) #33 ENSTTRG00000002476 HNRNPUL2 (ENSTTRG00000002475) #35 GNG3 (ENSTTRG00000002474) #36 ENSTTRG00000002473 #37 LRRN4CL (ENSTTRG00000002472) Sperm whale MODERN SPECIES 7 FLRT1 (ENSPCTG00005012477) #7 MACROD1 (ENSPCTG00005012373) OTUB1 (ENSPCTG00005012259) #8 ENSPCTG00005012211 #9 NAA40 (ENSPCTG00005012111) #10 RCOR2 (ENSPCTG00005012073) #11 SPINDOC (ENSPCTG00005012035) #13 ZFTA (ENSPCTG00005011961) #14 RTN3 (ENSPCTG00005011595) #15 ATL3 (ENSPCTG00005011358) #16 LGALS12 (ENSPCTG00005011050) #20 ENSPCTG00005010978 #21 SLC22A9 (ENSPCTG00005010871) ENSPCTG00005010850 ENSPCTG00005010706 SLC22A8 (ENSPCTG00005010325) #22 SLC22A6 (ENSPCTG00005009975) #23 ENSPCTG00005009866 #23 SLC3A2 (ENSPCTG00005009673) #25 ENSPCTG00005009626 ENSPCTG00005009578 INCENP (ENSPCTG00005009388) ENSPCTG00005009299 RAB3IL1 (ENSPCTG00005008916) ENSPCTG00005008871 MYRF (ENSPCTG00005008529) TMEM258 (ENSPCTG00005008491) FEN1 (ENSPCTG00005008477) ENSPCTG00005008459 FADS1 (ENSPCTG00005008419) FADS2 (ENSPCTG00005008356) Blue whale MODERN SPECIES 19 OTUB1 (ENSBMSG00010010263) #8 ENSBMSG00010010232 #9 NAA40 (ENSBMSG00010010195) #10 RCOR2 (ENSBMSG00010010142) #11 MARK2 (ENSBMSG00010009492) #12 SPINDOC (ENSBMSG00010009408) #13 ZFTA (ENSBMSG00010009395) #14 RTN3 (ENSBMSG00010009260) #15 ATL3 (ENSBMSG00010009168) #16 PLAAT3 (ENSBMSG00010009143) #17 LGALS12 (ENSBMSG00010009076) #20 PLAAT5 (ENSBMSG00010009039) #21 SLC22A9 (ENSBMSG00010009021) ENSBMSG00010009002 ENSBMSG00010008993 SLC22A8 (ENSBMSG00010008957) #22 SLC22A6 (ENSBMSG00010008894) #23 ENSBMSG00010008869 CHRM1 (ENSBMSG00010008857) #24 SLC3A2 (ENSBMSG00010008809) #25 WDR74 (ENSBMSG00010008708) #26 NXF1 (ENSBMSG00010008667) #28 TMEM223 (ENSBMSG00010008640) #29 TMEM179B (ENSBMSG00010008625) #30 TAF6L (ENSBMSG00010008522) #31 POLR2G (ENSBMSG00010008473) #32 ZBTB3 (ENSBMSG00010008452) #33 TTC9C (ENSBMSG00010008436) #34 HNRNPUL2 (ENSBMSG00010008413) #35 GNG3 (ENSBMSG00010008393) #36 BSCL2 (ENSBMSG00010008336) #37 Pecora ANCESTRAL SPECIES 13 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d.a.a #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.l ENSGT00940000163667.a.c.b ENSGT00940000163667.a.c.a.b.b.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Yarkand deer MODERN SPECIES 11 SPINDOC (ENSCHYG00000000325) #13 ZFTA (ENSCHYG00000000304) #14 RTN3 (ENSCHYG00000000247) #15 ATL3 (ENSCHYG00000000208) #16 PLAAT3 (ENSCHYG00000000190) #17 LGALS12 (ENSCHYG00000000154) #20 ENSCHYG00000000141 #21 ENSCHYG00000000122 ENSCHYG00000000102 ENSCHYG00000000068 ENSCHYG00000000059 ENSCHYG00000000040 ENSCHYG00000000030 ENSCHYG00000020357 ENSCHYG00000020101 SLC22A8 (ENSCHYG00000019926) #22 SLC22A6 (ENSCHYG00000019813) #23 CHRM1 (ENSCHYG00000019787) #24 SLC3A2 (ENSCHYG00000019634) #25 WDR74 (ENSCHYG00000019192) #26 ENSCHYG00000019153 STX5 (ENSCHYG00000018938) #27 NXF1 (ENSCHYG00000018593) #28 TMEM223 (ENSCHYG00000018545) #29 TMEM179B (ENSCHYG00000018397) #30 TAF6L (ENSCHYG00000018298) #31 POLR2G (ENSCHYG00000018228) #32 ZBTB3 (ENSCHYG00000018210) #33 TTC9C (ENSCHYG00000018166) #34 HNRNPUL2 (ENSCHYG00000017808) #35 GNG3 (ENSCHYG00000017765) #36 Percora_a ANCESTRAL SPECIES 16 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d.a.a #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.a.a ENSGT00940000161239.k.a.b ENSGT00940000161239.k.b ENSGT00940000163667.b ENSGT00940000163667.a.c.a.b.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805.p #34 ENSGT00940000160376 #35 ENSGT00390000011639 #37 Siberian musk deer MODERN SPECIES 1224 SPINDOC (ENSMMSG00000008448) #13 ENSMMSG00000008470 ZFTA (ENSMMSG00000008490) #14 RTN3 (ENSMMSG00000008565) #15 ATL3 (ENSMMSG00000008889) #16 PLAAT3 (ENSMMSG00000008953) #17 LGALS12 (ENSMMSG00000009042) #20 PLAAT5 (ENSMMSG00000009542) #21 ENSMMSG00000009592 ENSMMSG00000009715 ENSMMSG00000011665 ENSMMSG00000011721 ENSMMSG00000011784 ENSMMSG00000011868 ENSMMSG00000011879 SLC22A8 (ENSMMSG00000011893) #22 SLC22A6 (ENSMMSG00000012011) #23 CHRM1 (ENSMMSG00000012096) #24 SLC3A2 (ENSMMSG00000012111) #25 WDR74 (ENSMMSG00000012237) #26 STX5 (ENSMMSG00000012364) #27 ENSMMSG00000012430 #28 TMEM223 (ENSMMSG00000012527) #29 TMEM179B (ENSMMSG00000012548) #30 TAF6L (ENSMMSG00000012575) #31 ENSMMSG00000012609 #32 ZBTB3 (ENSMMSG00000012634) #33 TTC9C (ENSMMSG00000012643) #34 HNRNPUL2 (ENSMMSG00000012673) #35 BSCL2 (ENSMMSG00000012721) #37 ENSMMSG00000012801 #36 Bovidae ANCESTRAL SPECIES 16 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d.a.a #17 ENSGT00940000154853.d.a.b.b #17 ENSGT00940000154853.d.a.b.a.b #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.a.a ENSGT00940000161239.k.a.b ENSGT00940000161239.k.b ENSGT00940000163667.b ENSGT00940000163667.a.c.b ENSGT00940000163667.a.c.a.b.b.b ENSGT00940000163667.a.c.a.b.b.a ENSGT00940000163667.a.c.a.b.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805.p #34 ENSGT00940000160376 #35 ENSGT00390000011639 #37 Bovinae ANCESTRAL SPECIES 24 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d.a.a #17 ENSGT00940000154853.d.a.b.b #17 ENSGT00940000154853.d.a.b.a.b #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.a.b ENSGT00940000161239.k.b ENSGT00940000163667.b ENSGT00940000163667.a.c.b ENSGT00940000163667.a.c.a.b.b.b ENSGT00940000163667.a.c.a.b.b.a ENSGT00940000163667.a.c.a.b.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805.p #34 ENSGT00940000160376 #35 ENSGT00390000011639 #37 Bos ANCESTRAL SPECIES 11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d.a.a #17 ENSGT00940000154853.d.a.b.b #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.a.b ENSGT00940000161239.k.b ENSGT00940000163667.b ENSGT00940000163667.a.c.b ENSGT00940000163667.a.c.a.b.b.b ENSGT00940000163667.a.c.a.b.b.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805.p.b #34 ENSGT00940000160376 #35 ENSGT00390000011639 #37 Bos_b ANCESTRAL SPECIES 10 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d.a.a #17 ENSGT00940000154853.d.a.b.b #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.a.b ENSGT00940000161239.k.b ENSGT00940000163667.b ENSGT00940000163667.a.c.b ENSGT00940000163667.a.c.a.a ENSGT00940000163667.a.c.a.b.b.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00940000162994.f.d.k.a.a.a ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805.p.a.a #34 ENSGT00940000161805.p.b #34 Hybrid Bos Indicus MODERN SPECIES 21 MARK2 (ENSBIXG00005012594) #12 SPINDOC (ENSBIXG00005012481) #13 RTN3 (ENSBIXG00005012431) #15 ZFTA (ENSBIXG00005012369) #14 ATL3 (ENSBIXG00005012347) #16 ENSBIXG00005001297 #17 ENSBIXG00005012288 #17 LGALS12 (ENSBIXG00005012274) #20 PLAAT5 (ENSBIXG00005012206) #21 ENSBIXG00005012170 ENSBIXG00005006329 ENSBIXG00005011983 ENSBIXG00005011974 ENSBIXG00005011910 ENSBIXG00005011899 SLC22A8 (ENSBIXG00005000435) #22 SLC22A6 (ENSBIXG00005011838) #23 ENSBIXG00005011826 #23 SLC3A2 (ENSBIXG00005011715) #25 ENSBIXG00005011601 WDR74 (ENSBIXG00005011524) #26 STX5 (ENSBIXG00005000467) #27 ENSBIXG00005011400 NXF1 (ENSBIXG00005011391) #28 TMEM223 (ENSBIXG00005011347) #29 TMEM179B (ENSBIXG00005011316) #30 TAF6L (ENSBIXG00005001087) #31 POLR2G (ENSBIXG00005011296) #32 TTC9C (ENSBIXG00005011271) #34 HNRNPUL2 (ENSBIXG00005006206) #35 BSCL2 (ENSBIXG00005011232) #37 Cow MODERN SPECIES 21 PLA2G16 (ENSBTAG00000015248) #17 ENSBTAG00000052238 ENSBTAG00000054910 ENSBTAG00000011019 #17 ENSBTAG00000037645 LGALS12 (ENSBTAG00000007108) #20 PLAAT5 (ENSBTAG00000032730) #21 ENSBTAG00000003236 SLC22A9 (ENSBTAG00000039463) ENSBTAG00000000518 ENSBTAG00000054320 SLC22A10 (ENSBTAG00000014584) ENSBTAG00000038655 ENSBTAG00000037570 ENSBTAG00000050277 SLC22A8 (ENSBTAG00000013644) #22 SLC22A6 (ENSBTAG00000013642) #23 ENSBTAG00000047110 #23 CHRM1 (ENSBTAG00000011579) #24 ENSBTAG00000050000 SLC3A2 (ENSBTAG00000013240) #25 WDR74 (ENSBTAG00000009491) #26 ENSBTAG00000048482 STX5 (ENSBTAG00000009490) #27 NXF1 (ENSBTAG00000009488) #28 TMEM223 (ENSBTAG00000009487) #29 TMEM179B (ENSBTAG00000009486) #30 TAF6L (ENSBTAG00000009484) #31 POLR2G (ENSBTAG00000009483) #32 ZBTB3 (ENSBTAG00000021329) #33 TTC9C (ENSBTAG00000000773) #34 Bos_a ANCESTRAL SPECIES 85 ENSGT00940000163667.a.c.a.b.b.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805.p.b #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 Wild yak MODERN SPECIES 1714 ENSBMUG00000023806 ENSBMUG00000023781 ENSBMUG00000023761 ENSBMUG00000023753 SLC22A8 (ENSBMUG00000023746) #22 SLC22A6 (ENSBMUG00000023728) #23 ENSBMUG00000023697 #23 CHRM1 (ENSBMUG00000023670) #24 SLC3A2 (ENSBMUG00000023664) #25 WDR74 (ENSBMUG00000023565) #26 STX5 (ENSBMUG00000023529) #27 NXF1 (ENSBMUG00000023515) #28 TMEM223 (ENSBMUG00000023496) #29 TMEM179B (ENSBMUG00000023489) #30 TAF6L (ENSBMUG00000023469) #31 POLR2G (ENSBMUG00000023457) #32 ZBTB3 (ENSBMUG00000023437) #33 TTC9C (ENSBMUG00000023431) #34 HNRNPUL2 (ENSBMUG00000023420) #35 GNG3 (ENSBMUG00000023415) #36 American bison MODERN SPECIES 3248 ENSBBBG00000020133 ENSBBBG00000020097 ENSBBBG00000020093 #17 ENSBBBG00000007440 #17 LGALS12 (ENSBBBG00000005432) #20 PLAAT5 (ENSBBBG00000005425) #21 ENSBBBG00000005424 ENSBBBG00000020020 ENSBBBG00000020008 ENSBBBG00000005407 ENSBBBG00000005111 ENSBBBG00000019974 ENSBBBG00000019971 ENSBBBG00000019967 SLC22A8 (ENSBBBG00000005123) #22 SLC22A6 (ENSBBBG00000019919) #23 ENSBBBG00000019891 #23 CHRM1 (ENSBBBG00000005365) #24 SLC3A2 (ENSBBBG00000019812) #25 WDR74 (ENSBBBG00000005172) #26 STX5 (ENSBBBG00000005199) #27 NXF1 (ENSBBBG00000019622) #28 TMEM223 (ENSBBBG00000019568) #29 TMEM179B (ENSBBBG00000019563) #30 TAF6L (ENSBBBG00000005295) #31 POLR2G (ENSBBBG00000008173) #32 ZBTB3 (ENSBBBG00000019531) #33 TTC9C (ENSBBBG00000005281) #34 HNRNPUL2 (ENSBBBG00000019515) #35 GNG3 (ENSBBBG00000019496) #36 Caprinae ANCESTRAL SPECIES 20 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d.a.a #17 ENSGT00940000154853.d.a.b.b #17 ENSGT00940000154853.d.a.b.a.b #17 ENSGT00940000154853.d.a.b.a.a #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.k.a.a ENSGT00940000161239.k.a.b ENSGT00940000161239.k.b ENSGT00940000163667.b ENSGT00940000161239.l ENSGT00940000163667.a.c.b ENSGT00940000163667.a.c.a.a.c ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805.p #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 Goat MODERN SPECIES 21 SPINDOC (ENSCHIG00000009623) #13 ZFTA (ENSCHIG00000022847) #14 ENSCHIG00000014185 #15 ATL3 (ENSCHIG00000022420) #16 ENSCHIG00000024459 #17 ENSCHIG00000014874 #17 ENSCHIG00000016166 #17 ENSCHIG00000003540 #20 ENSCHIG00000011083 #17 ENSCHIG00000020309 #20 PLAAT5 (ENSCHIG00000005227) #21 SLC22A9 (ENSCHIG00000000518) ENSCHIG00000004328 ENSCHIG00000025065 ENSCHIG00000012746 SLC22A8 (ENSCHIG00000015089) #22 SLC22A6 (ENSCHIG00000023566) #23 ENSCHIG00000027134 #23 CHRM1 (ENSCHIG00000012488) #24 SLC3A2 (ENSCHIG00000017772) #25 WDR74 (ENSCHIG00000022750) #26 STX5 (ENSCHIG00000026215) #27 NXF1 (ENSCHIG00000010065) #28 TMEM223 (ENSCHIG00000020466) #29 TMEM179B (ENSCHIG00000026546) #30 TAF6L (ENSCHIG00000013919) #31 POLR2G (ENSCHIG00000023730) #32 ZBTB3 (ENSCHIG00000008054) #33 TTC9C (ENSCHIG00000014645) #34 HNRNPUL2 (ENSCHIG00000020213) #35 GNG3 (ENSCHIG00000015824) #36 Rambouillet Sheep MODERN SPECIES 13 SPINDOC (ENSOARG00020023441) #13 ZFTA (ENSOARG00020023427) #14 RTN3 (ENSOARG00020023116) #15 ATL3 (ENSOARG00020022978) #16 ENSOARG00020022912 #17 ENSOARG00020022856 #17 LGALS12 (ENSOARG00020022698) #20 PLAAT5 (ENSOARG00020022652) #21 ENSOARG00020022597 ENSOARG00020022570 ENSOARG00020022539 ENSOARG00020022510 ENSOARG00020022414 ENSOARG00020022359 ENSOARG00020022311 SLC22A8 (ENSOARG00020022122) #22 SLC22A6 (ENSOARG00020022001) #23 ENSOARG00020021949 #23 CHRM1 (ENSOARG00020021898) #24 SLC3A2 (ENSOARG00020021842) #25 WDR74 (ENSOARG00020021626) #26 STX5 (ENSOARG00020021530) #27 NXF1 (ENSOARG00020021483) #28 TMEM223 (ENSOARG00020021462) #29 TMEM179B (ENSOARG00020021391) #30 TAF6L (ENSOARG00020021329) #31 POLR2G (ENSOARG00020021260) #32 ZBTB3 (ENSOARG00020021245) #33 ENSOARG00020021233 TTC9C (ENSOARG00020021198) #34 HNRNPUL2 (ENSOARG00020021145) #35 Camelidae ANCESTRAL SPECIES 55 ENSGT00940000162436 #21 ENSGT00940000161239.k.a.a ENSGT00940000161239.k.b ENSGT00940000163667.b.f ENSGT00940000163667.b.e ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589.e #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Arabian camel MODERN SPECIES 1 NAA40 (ENSCDRG00005019104) #10 RCOR2 (ENSCDRG00005019145) #11 MARK2 (ENSCDRG00005019188) #12 SPINDOC (ENSCDRG00005019332) #13 ZFTA (ENSCDRG00005019367) #14 RTN3 (ENSCDRG00005019397) #15 ATL3 (ENSCDRG00005019542) #16 PLAAT3 (ENSCDRG00005019659) #17 ENSCDRG00005019739 LGALS12 (ENSCDRG00005019752) #20 ENSCDRG00005019804 #21 ENSCDRG00005019903 ENSCDRG00005019931 ENSCDRG00005019949 ENSCDRG00005019998 SLC22A8 (ENSCDRG00005020013) #22 SLC22A6 (ENSCDRG00005020053) #23 ENSCDRG00005020082 #23 ENSCDRG00005004630 CHRM1 (ENSCDRG00005004637) #24 SLC3A2 (ENSCDRG00005004655) #25 WDR74 (ENSCDRG00005004811) #26 STX5 (ENSCDRG00005004888) #27 NXF1 (ENSCDRG00005004967) #28 TMEM223 (ENSCDRG00005005013) #29 TMEM179B (ENSCDRG00005005027) #30 TAF6L (ENSCDRG00005005091) #31 POLR2G (ENSCDRG00005005119) #32 ZBTB3 (ENSCDRG00005005155) #33 TTC9C (ENSCDRG00005005167) #34 HNRNPUL2 (ENSCDRG00005005188) #35 Alpaca MODERN SPECIES 1079 SLC22A8 (ENSVPAG00000000079) #22 Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Carnivora ANCESTRAL SPECIES 7 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B.c.b #36 Caniformia ANCESTRAL SPECIES 21 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B.c.b #36 Caniformia_b ANCESTRAL SPECIES 19 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162660.b.e.b ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B.c.b #36 Ursidae ANCESTRAL SPECIES 2 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162660.b.e.b ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B.c.b #36 Ursus ANCESTRAL SPECIES 63 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B.c.b #36 American black bear MODERN SPECIES 3685 SLC22A8 (ENSUAMG00000017118) #22 SLC22A6 (ENSUAMG00000017121) #23 ENSUAMG00000017125 CHRM1 (ENSUAMG00000017126) #24 SLC3A2 (ENSUAMG00000017134) #25 WDR74 (ENSUAMG00000017153) #26 ENSUAMG00000017188 Polar bear MODERN SPECIES 303 ENSUMAG00000014844 #21 SLC22A9 (ENSUMAG00000014693) SLC22A10 (ENSUMAG00000014649) SLC22A8 (ENSUMAG00000014618) #22 SLC22A6 (ENSUMAG00000014598) #23 ENSUMAG00000014595 CHRM1 (ENSUMAG00000014593) #24 SLC3A2 (ENSUMAG00000014587) #25 WDR74 (ENSUMAG00000014565) #26 STX5 (ENSUMAG00000014558) #27 NXF1 (ENSUMAG00000014552) #28 TMEM179B (ENSUMAG00000014547) #30 ENSUMAG00000014541 POLR2G (ENSUMAG00000014537) #32 ZBTB3 (ENSUMAG00000014533) #33 TTC9C (ENSUMAG00000014527) #34 HNRNPUL2 (ENSUMAG00000014465) #35 GNG3 (ENSUMAG00000014458) #36 BSCL2 (ENSUMAG00000014444) #37 Giant Panda MODERN SPECIES 7 MACROD1 (ENSAMEG00000017979) OTUB1 (ENSAMEG00000018084) #8 COX8A (ENSAMEG00000026424) #9 NAA40 (ENSAMEG00000030824) #10 RCOR2 (ENSAMEG00000018101) #11 MARK2 (ENSAMEG00000018111) #12 SPINDOC (ENSAMEG00000018132) #13 ZFTA (ENSAMEG00000025175) #14 RTN3 (ENSAMEG00000018135) #15 ATL3 (ENSAMEG00000018141) #16 PLAAT3 (ENSAMEG00000023459) #17 ENSAMEG00000018150 LGALS12 (ENSAMEG00000027710) #20 SLC22A9 (ENSAMEG00000005817) SLC22A10 (ENSAMEG00000005956) SLC22A8 (ENSAMEG00000005991) #22 SLC22A6 (ENSAMEG00000006012) #23 CHRM1 (ENSAMEG00000020258) #24 SLC3A2 (ENSAMEG00000006140) #25 WDR74 (ENSAMEG00000006160) #26 STX5 (ENSAMEG00000006206) #27 NXF1 (ENSAMEG00000006237) #28 TMEM223 (ENSAMEG00000024479) #29 TMEM179B (ENSAMEG00000006357) #30 TAF6L (ENSAMEG00000006364) #31 POLR2G (ENSAMEG00000006386) #32 ZBTB3 (ENSAMEG00000024771) #33 TTC9C (ENSAMEG00000006425) #34 HNRNPUL2 (ENSAMEG00000006434) #35 ENSAMEG00000002116 #36 GNG3 (ENSAMEG00000006462) #36 Mustelinae ANCESTRAL SPECIES 3 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B.c.b #36 Ferret MODERN SPECIES 314 FLRT1 (ENSMPUG00000019993) #7 OTUB1 (ENSMPUG00000013314) #8 NAA40 (ENSMPUG00000013317) #10 RCOR2 (ENSMPUG00000013320) #11 MARK2 (ENSMPUG00000013326) #12 SPINDOC (ENSMPUG00000013338) #13 ZFTA (ENSMPUG00000013353) #14 ENSMPUG00000013356 #15 ATL3 (ENSMPUG00000013363) #16 ENSMPUG00000013476 #17 ENSMPUG00000013479 #17 LGALS12 (ENSMPUG00000013482) #20 PLAAT5 (ENSMPUG00000013509) #21 SLC22A9 (ENSMPUG00000013528) ENSMPUG00000013536 SLC22A8 (ENSMPUG00000013544) #22 SLC22A6 (ENSMPUG00000013551) #23 CHRM1 (ENSMPUG00000019995) #24 SLC3A2 (ENSMPUG00000013553) #25 WDR74 (ENSMPUG00000013557) #26 TMEM179B (ENSMPUG00000013609) #30 STX5 (ENSMPUG00000013614) #27 NXF1 (ENSMPUG00000013658) #28 TMEM223 (ENSMPUG00000013664) #29 POLR2G (ENSMPUG00000013667) #32 ZBTB3 (ENSMPUG00000013694) #33 TTC9C (ENSMPUG00000013698) #34 HNRNPUL2 (ENSMPUG00000013707) #35 GNG3 (ENSMPUG00000013710) #36 BSCL2 (ENSMPUG00000013712) #37 UBXN1 (ENSMPUG00000013715) American mink MODERN SPECIES 215 LGALS12 (ENSNVIG00000019356) #20 PLAAT5 (ENSNVIG00000019411) #21 SLC22A9 (ENSNVIG00000019546) SLC22A10 (ENSNVIG00000020248) SLC22A8 (ENSNVIG00000020290) #22 SLC22A6 (ENSNVIG00000020357) #23 ENSNVIG00000020395 CHRM1 (ENSNVIG00000020398) #24 SLC3A2 (ENSNVIG00000020406) #25 WDR74 (ENSNVIG00000020499) #26 STX5 (ENSNVIG00000020600) #27 NXF1 (ENSNVIG00000020616) #28 TMEM223 (ENSNVIG00000020681) #29 TMEM179B (ENSNVIG00000020688) #30 TAF6L (ENSNVIG00000020709) #31 RPB7 (ENSNVIG00000020718) #32 ZBTB3 (ENSNVIG00000020739) #33 TTC9C (ENSNVIG00000020741) #34 HNRNPUL2 (ENSNVIG00000020754) #35 BSCL2 (ENSNVIG00000020778) #37 Canidae ANCESTRAL SPECIES 13 ENSGT00390000006255.b.b.a #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B.c.a #36 ENSGT00390000011639 #37 Canis_lupus ANCESTRAL SPECIES 7 ENSGT00390000006255.b.b.a #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d.e #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B.c.a #36 ENSGT00390000011639 #37 Dog MODERN SPECIES 9 SPINDOC (ENSCAFG00845005829) #13 ZFTA (ENSCAFG00845005900) #14 RTN3 (ENSCAFG00845006009) #15 ATL3 (ENSCAFG00845006281) #16 ENSCAFG00845006483 PLAAT3 (ENSCAFG00845006522) #17 ENSCAFG00845006559 #18 PLAAT4 (ENSCAFG00845006599) #19 LGALS12 (ENSCAFG00845006674) #20 PLAAT5 (ENSCAFG00845006736) #21 SLC22A9 (ENSCAFG00845006786) SLC22A10 (ENSCAFG00845006977) ENSCAFG00845007034 ENSCAFG00845007087 ENSCAFG00845007123 ENSCAFG00845007168 #22 SLC22A6 (ENSCAFG00845007241) #23 CHRM1 (ENSCAFG00845007309) #24 SLC3A2 (ENSCAFG00845007354) #25 WDR74 (ENSCAFG00845007617) #26 STX5 (ENSCAFG00845007709) #27 NXF1 (ENSCAFG00845007836) #28 TMEM179B (ENSCAFG00845008033) #30 TMEM223 (ENSCAFG00845008107) #29 TAF6L (ENSCAFG00845008143) #31 POLR2G (ENSCAFG00845008221) #32 ZBTB3 (ENSCAFG00845008270) #33 TTC9C (ENSCAFG00845008314) #34 HNRNPUL2 (ENSCAFG00845008372) #35 BSCL2 (ENSCAFG00845008494) #37 GNG3 (ENSCAFG00845008569) #36 Dingo MODERN SPECIES 36 MARK2 (ENSCAFG00020014004) #12 SPINDOC (ENSCAFG00020013994) #13 ZFTA (ENSCAFG00020013984) #14 ENSCAFG00020013944 #15 ENSCAFG00020013937 ATL3 (ENSCAFG00020013890) #16 PLAAT3 (ENSCAFG00020013886) #17 ENSCAFG00020013885 #18 PLAAT4 (ENSCAFG00020013883) #19 LGALS12 (ENSCAFG00020013880) #20 ENSCAFG00020013852 #21 SLC22A9 (ENSCAFG00020013593) ENSCAFG00020013569 SLC22A10 (ENSCAFG00020013312) ENSCAFG00020013304 SLC22A8 (ENSCAFG00020013254) #22 SLC22A6 (ENSCAFG00020013234) #23 CHRM1 (ENSCAFG00020013229) #24 SLC3A2 (ENSCAFG00020013226) #25 WDR74 (ENSCAFG00020013159) #26 STX5 (ENSCAFG00020013153) #27 NXF1 (ENSCAFG00020013149) #28 TMEM223 (ENSCAFG00020013148) #29 TMEM179B (ENSCAFG00020013145) #30 TAF6L (ENSCAFG00020013140) #31 POLR2G (ENSCAFG00020013136) #32 ZBTB3 (ENSCAFG00020013133) #33 TTC9C (ENSCAFG00020013129) #34 HNRNPUL2 (ENSCAFG00020013120) #35 GNG3 (ENSCAFG00020013115) #36 BSCL2 (ENSCAFG00020013107) #37 Red fox MODERN SPECIES 49 NAA40 (ENSVVUG00000029786) #10 RCOR2 (ENSVVUG00000029787) #11 MARK2 (ENSVVUG00000029791) #12 SPINDOC (ENSVVUG00000029796) #13 ZFTA (ENSVVUG00000029797) #14 RTN3 (ENSVVUG00000029798) #15 ATL3 (ENSVVUG00000029799) #16 PLA2G16 (ENSVVUG00000029803) #17 ENSVVUG00000029804 #18 RARRES3 (ENSVVUG00000029807) #19 LGALS12 (ENSVVUG00000029809) #20 ENSVVUG00000029813 #21 SLC22A9 (ENSVVUG00000029817) SLC22A10 (ENSVVUG00000029819) ENSVVUG00000029820 SLC22A8 (ENSVVUG00000029821) #22 SLC22A6 (ENSVVUG00000029822) #23 CHRM1 (ENSVVUG00000029823) #24 SLC3A2 (ENSVVUG00000029824) #25 WDR74 (ENSVVUG00000029836) #26 STX5 (ENSVVUG00000029839) #27 NXF1 (ENSVVUG00000029840) #28 TMEM223 (ENSVVUG00000029841) #29 TMEM179B (ENSVVUG00000029842) #30 TAF6L (ENSVVUG00000029843) #31 POLR2G (ENSVVUG00000029844) #32 TTC9C (ENSVVUG00000029845) #34 HNRNPUL2 (ENSVVUG00000029847) #35 GNG3 (ENSVVUG00000029850) #36 BSCL2 (ENSVVUG00000029852) #37 ENSVVUG00000029854 Felidae ANCESTRAL SPECIES ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B.c.b #36 Panthera ANCESTRAL SPECIES 18 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000163667 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B.c.b #36 Panthera_a ANCESTRAL SPECIES 18 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000163667 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B.c.b #36 leopard MODERN SPECIES 64 FLRT1 (ENSPPRG00000015154) #7 ENSPPRG00000003587 #8 COX8A (ENSPPRG00000004014) #9 NAA40 (ENSPPRG00000004526) #10 RCOR2 (ENSPPRG00000005918) #11 MARK2 (ENSPPRG00000009691) #12 SPINDOC (ENSPPRG00000010767) #13 ZFTA (ENSPPRG00000011316) #14 ENSPPRG00000012195 #15 ATL3 (ENSPPRG00000012865) #16 PLAAT3 (ENSPPRG00000013267) #17 LGALS12 (ENSPPRG00000015392) #20 PLAAT5 (ENSPPRG00000017226) #21 SLC22A9 (ENSPPRG00000019825) ENSPPRG00000015426 SLC22A8 (ENSPPRG00000023668) #22 SLC22A6 (ENSPPRG00000000682) #23 ENSPPRG00000015606 ENSPPRG00000015614 CHRM1 (ENSPPRG00000015634) #24 SLC3A2 (ENSPPRG00000001175) #25 WDR74 (ENSPPRG00000002422) #26 STX5 (ENSPPRG00000003034) #27 NXF1 (ENSPPRG00000004342) #28 TMEM223 (ENSPPRG00000004902) #29 TMEM179B (ENSPPRG00000005200) #30 TAF6L (ENSPPRG00000005589) #31 POLR2G (ENSPPRG00000005669) #32 ZBTB3 (ENSPPRG00000005891) #33 TTC9C (ENSPPRG00000005993) #34 HNRNPUL2 (ENSPPRG00000006380) #35 Tiger MODERN SPECIES 369 STIP1 (ENSPTIG00000000613) ENSPTIG00000009338 #8 COX8A (ENSPTIG00000009882) #9 NAA40 (ENSPTIG00000010415) #10 RCOR2 (ENSPTIG00000012240) #11 MARK2 (ENSPTIG00000013108) #12 SPINDOC (ENSPTIG00000007294) #13 ENSPTIG00000008262 #15 ATL3 (ENSPTIG00000009817) #16 PLAAT3 (ENSPTIG00000012106) #17 LGALS12 (ENSPTIG00000013920) #20 PLAAT5 (ENSPTIG00000016710) #21 SLC22A9 (ENSPTIG00000018254) ENSPTIG00000019174 ENSPTIG00000006918 SLC22A8 (ENSPTIG00000019571) #22 SLC22A6 (ENSPTIG00000008570) #23 ENSPTIG00000007098 CHRM1 (ENSPTIG00000007102) #24 SLC3A2 (ENSPTIG00000012539) #25 WDR74 (ENSPTIG00000016962) #26 STX5 (ENSPTIG00000005204) #27 NXF1 (ENSPTIG00000008897) #28 ENSPTIG00000014441 #30 TAF6L (ENSPTIG00000014940) #31 POLR2G (ENSPTIG00000015781) #32 ZBTB3 (ENSPTIG00000016774) #33 TTC9C (ENSPTIG00000017476) #34 HNRNPUL2 (ENSPTIG00000017670) #35 ENSPTIG00000019130 #36 BSCL2 (ENSPTIG00000019239) #37 Cat MODERN SPECIES 241 COX8A (ENSFCAG00000014662) #9 NAA40 (ENSFCAG00000014660) #10 RCOR2 (ENSFCAG00000014656) #11 MARK2 (ENSFCAG00000014652) #12 SPINDOC (ENSFCAG00000014649) #13 CD1H11orf95 (ENSFCAG00000032639) #14 RTN3 (ENSFCAG00000023202) #15 ATL3 (ENSFCAG00000031360) #16 PLAAT3 (ENSFCAG00000001309) #17 PLAAT2 (ENSFCAG00000036450) #18 ENSFCAG00000051640 #19 LGALS12 (ENSFCAG00000014648) #20 PLAAT5 (ENSFCAG00000030094) #21 SLC22A25 (ENSFCAG00000018565) ENSFCAG00000041221 SLC22A8 (ENSFCAG00000005255) #22 SLC22A6 (ENSFCAG00000005247) #23 ENSFCAG00000035000 CHRM1 (ENSFCAG00000000336) #24 SLC3A2 (ENSFCAG00000014781) #25 WDR74 (ENSFCAG00000014780) #26 STX5 (ENSFCAG00000014778) #27 NXF1 (ENSFCAG00000014774) #28 TMEM223 (ENSFCAG00000025098) #29 TMEM179B (ENSFCAG00000014773) #30 TAF6L (ENSFCAG00000022346) #31 POLR2G (ENSFCAG00000026072) #32 ZBTB3 (ENSFCAG00000044175) #33 TTC9C (ENSFCAG00000014768) #34 HNRNPUL2 (ENSFCAG00000014766) #35 ENSFCAG00000035265 #36 Laurasiatheria_c ANCESTRAL SPECIES 20 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031.d #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 Equus ANCESTRAL SPECIES 11 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000154853.c #18 ENSGT00940000162878.c.a.a #19 ENSGT00940000162878.c.b #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239.n.b ENSGT00940000161239.m.a ENSGT00940000161239.m.b ENSGT00940000161239.n.a ENSGT00940000163667 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486.a #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Horse MODERN SPECIES 3 ENSECAG00000019767 #18 ENSECAG00000031322 #19 ENSECAG00000036003 #19 ENSECAG00000054862 ENSECAG00000038997 #18 ENSECAG00000032959 #19 LGALS12 (ENSECAG00000019637) #20 PLAAT5 (ENSECAG00000019603) #21 ENSECAG00000049087 ENSECAG00000030790 ENSECAG00000055620 ENSECAG00000054899 SLC22A10 (ENSECAG00000014789) SLC22A24 (ENSECAG00000013637) ENSECAG00000018908 SLC22A8 (ENSECAG00000012673) #22 SLC22A6 (ENSECAG00000010602) #23 ENSECAG00000034010 #23 SLC3A2 (ENSECAG00000009822) #25 CHRM1 (ENSECAG00000005493) #24 WDR74 (ENSECAG00000009091) #26 TEX54 (ENSECAG00000028010) STX5 (ENSECAG00000008632) #27 NXF1 (ENSECAG00000001426) #28 TMEM223 (ENSECAG00000001265) #29 TMEM179B (ENSECAG00000001075) #30 TAF6L (ENSECAG00000021482) #31 POLR2G (ENSECAG00000021465) #32 ZBTB3 (ENSECAG00000021457) #33 ENSECAG00000050506 #34 HNRNPUL2 (ENSECAG00000020298) #35 Donkey MODERN SPECIES 8 ATL3 (ENSEASG00005020084) #16 ENSEASG00005020091 #17 PLAAT2 (ENSEASG00005038782) #18 ENSEASG00005030403 #19 ENSEASG00005020110 #19 ENSEASG00005031505 #18 ENSEASG00005020101 #19 LGALS12 (ENSEASG00005026393) #20 ENSEASG00005012059 #21 ENSEASG00005037448 ENSEASG00005037691 ENSEASG00005029445 ENSEASG00005038155 ENSEASG00005011472 SLC22A24 (ENSEASG00005011428) SLC22A8 (ENSEASG00005011414) #22 SLC22A6 (ENSEASG00005011412) #23 ENSEASG00005011406 #23 CHRM1 (ENSEASG00005035508) #24 SLC3A2 (ENSEASG00005011398) #25 WDR74 (ENSEASG00005011378) #26 STX5 (ENSEASG00005011371) #27 NXF1 (ENSEASG00005011368) #28 TMEM223 (ENSEASG00005024604) #29 TMEM179B (ENSEASG00005011364) #30 TAF6L (ENSEASG00005011361) #31 POLR2G (ENSEASG00005011357) #32 ENSEASG00005011353 #33 ENSEASG00005029535 #34 HNRNPUL2 (ENSEASG00005011347) #35 GNG3 (ENSEASG00005026313) #36 Chiroptera ANCESTRAL SPECIES 14 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031.d #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 Microchiroptera ANCESTRAL SPECIES 13 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031.d #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.c #18 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 Greater horseshoe bat MODERN SPECIES 2 FLRT1 (ENSRFEG00010008949) #7 OTUB1 (ENSRFEG00010008961) #8 COX8A (ENSRFEG00010009021) #9 NAA40 (ENSRFEG00010009063) #10 RCOR2 (ENSRFEG00010009161) #11 MARK2 (ENSRFEG00010009280) #12 SPINDOC (ENSRFEG00010009495) #13 ZFTA (ENSRFEG00010009546) #14 RTN3 (ENSRFEG00010009595) #15 ATL3 (ENSRFEG00010009831) #16 ENSRFEG00010010034 #19 ENSRFEG00010010178 #19 LGALS12 (ENSRFEG00010010237) #20 ENSRFEG00010010520 #21 SLC22A9 (ENSRFEG00010010675) SLC22A8 (ENSRFEG00010010746) #22 SLC22A6 (ENSRFEG00010011255) #23 ENSRFEG00010011298 CHRM1 (ENSRFEG00010011318) #24 SLC3A2 (ENSRFEG00010011338) #25 WDR74 (ENSRFEG00010011575) #26 STX5 (ENSRFEG00010011935) #27 NXF1 (ENSRFEG00010012033) #28 TMEM223 (ENSRFEG00010012090) #29 TMEM179B (ENSRFEG00010012153) #30 TAF6L (ENSRFEG00010012295) #31 POLR2G (ENSRFEG00010012342) #32 ZBTB3 (ENSRFEG00010012397) #33 TTC9C (ENSRFEG00010012416) #34 HNRNPUL2 (ENSRFEG00010012436) #35 GNG3 (ENSRFEG00010012628) #36 Microbat MODERN SPECIES 422 ENSMLUG00000016062 #22 Megabat MODERN SPECIES 2880 SLC22A8 (ENSPVAG00000003508) #22 SLC3A2 (ENSPVAG00000003503) #25 WDR74 (ENSPVAG00000003500) #26 STX5 (ENSPVAG00000003498) #27 NXF1 (ENSPVAG00000003495) #28 TMEM223 (ENSPVAG00000003491) #29 TMEM179B (ENSPVAG00000003490) #30 TAF6L (ENSPVAG00000003486) #31 POLR2G (ENSPVAG00000003481) #32 ZBTB3 (ENSPVAG00000003477) #33 ENSPVAG00000003476 HNRNPUL2 (ENSPVAG00000003475) #35 GNG3 (ENSPVAG00000003474) #36 BSCL2 (ENSPVAG00000003473) #37 LRRN4CL (ENSPVAG00000003472) UBXN1 (ENSPVAG00000003470) Atlantogenata ANCESTRAL SPECIES 17 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162878 #19 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589.h #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 ENSGT00390000011639.d #37 Afrotheria ANCESTRAL SPECIES 9 ENSGT00940000161450 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589.h #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000165941 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 ENSGT00390000011639.d #37 Afrotheria_a ANCESTRAL SPECIES 9 ENSGT00940000161450 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482.d #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000161499 #20 ENSGT00940000162436 #21 ENSGT00940000161239 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589.h #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000165941 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 ENSGT00390000011639.d #37 Elephant MODERN SPECIES 532 OTUB1 (ENSLAFG00000021422) #8 COX8A (ENSLAFG00000011304) #9 NAA40 (ENSLAFG00000022166) #10 RCOR2 (ENSLAFG00000006094) #11 MARK2 (ENSLAFG00000006072) #12 SPINDOC (ENSLAFG00000030919) #13 ZFTA (ENSLAFG00000020497) #14 RTN3 (ENSLAFG00000018325) #15 ATL3 (ENSLAFG00000018322) #16 PLAAT3 (ENSLAFG00000023290) #17 ENSLAFG00000008426 #18 ENSLAFG00000011733 #18 LGALS12 (ENSLAFG00000002946) #20 PLAAT5 (ENSLAFG00000021958) #21 SLC22A9 (ENSLAFG00000012501) SLC22A8 (ENSLAFG00000004863) #22 SLC22A6 (ENSLAFG00000009174) #23 SLC3A2 (ENSLAFG00000018263) #25 WDR74 (ENSLAFG00000006790) #26 EML3 (ENSLAFG00000009937) STX5 (ENSLAFG00000006788) #27 NXF1 (ENSLAFG00000006778) #28 TMEM223 (ENSLAFG00000023089) #29 TMEM179B (ENSLAFG00000006777) #30 TAF6L (ENSLAFG00000022526) #31 POLR2G (ENSLAFG00000004354) #32 TTC9C (ENSLAFG00000011732) #34 HNRNPUL2 (ENSLAFG00000005377) #35 GNG3 (ENSLAFG00000005381) #36 BSCL2 (ENSLAFG00000030634) #37 UBXN1 (ENSLAFG00000021809) Hyrax MODERN SPECIES 6913 SLC22A8 (ENSPCAG00000001134) #22 SLC22A6 (ENSPCAG00000001050) #23 Tenrec MODERN SPECIES 4402 ENSETEG00000008093 #22 Xenarthra ANCESTRAL SPECIES 58 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.i.a #28 ENSGT00390000012589.h #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 ENSGT00390000011639.d #37 ENSGT00940000162696 Armadillo MODERN SPECIES 576 ENSDNOG00000034059 #23 SLC22A8 (ENSDNOG00000040520) #22 ENSDNOG00000035908 #23 CHRM1 (ENSDNOG00000033696) #24 SLC3A2 (ENSDNOG00000035768) #25 WDR74 (ENSDNOG00000043582) #26 ENSDNOG00000005008 #27 NXF1 (ENSDNOG00000024303) #28 TMEM223 (ENSDNOG00000003066) #29 TMEM179B (ENSDNOG00000045983) #30 ENSDNOG00000031631 #31 POLR2G (ENSDNOG00000043426) #32 ENSDNOG00000012208 ENSDNOG00000043011 #33 TTC9C (ENSDNOG00000006523) #34 HNRNPUL2 (ENSDNOG00000006508) #35 GNG3 (ENSDNOG00000006502) #36 Marsupialia ANCESTRAL SPECIES 12 ENSGT00390000006979.a #8 ENSGT00940000156048.a.a ENSGT00390000006255.b.b #9 ENSGT00940000168159 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162660.b.e.b.g.a ENSGT00940000161499 #20 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.g #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00950000183059.a ENSGT00940000161486 #33 ENSGT00940000161805 #34 Marsupialia_b ANCESTRAL SPECIES 15 ENSGT00390000006979.a #8 ENSGT00940000156048.a.a ENSGT00390000006255.b.b #9 ENSGT00940000168159 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162660.b.e.b.g.a ENSGT00940000161499 #20 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.g #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00950000183059.a ENSGT00940000161486 #33 ENSGT00940000161805 #34 Diprotodontia ANCESTRAL SPECIES 26 ENSGT00940000161450 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00940000156048.a.a ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162660.b.e.b.g.a ENSGT00940000161499 #20 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.g #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Diprotodontia_a ANCESTRAL SPECIES 15 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00940000156048.a.a ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162660.b.e.b.g.a ENSGT00940000162660.b.e.a ENSGT00940000161499 #20 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.g #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 Common wonbat MODERN SPECIES 901 SLC22A8 (ENSVURG00010000539) #22 SLC22A6 (ENSVURG00010000773) #23 ENSVURG00010000838 ##22 ENSVURG00010001279 CHRM1 (ENSVURG00010001286) #24 SLC3A2 (ENSVURG00010001296) #25 WDR74 (ENSVURG00010001367) #26 STX5 (ENSVURG00010001407) #27 ENSVURG00010001446 #28 TMEM223 (ENSVURG00010001486) #29 TMEM179B (ENSVURG00010001496) #30 TAF6L (ENSVURG00010001513) #31 POLR2G (ENSVURG00010001531) #32 TTC9C (ENSVURG00010001583) #34 ENSVURG00010001618 GNG3 (ENSVURG00010001979) #36 koala MODERN SPECIES 179 ENSPCIG00000016937 #8 ENSPCIG00000016936 #9 ENSPCIG00000030061 NAA40 (ENSPCIG00000035706) #10 RCOR2 (ENSPCIG00000015584) #11 MARK2 (ENSPCIG00000015578) #12 SPINDOC (ENSPCIG00000015574) #13 ZFTA (ENSPCIG00000015569) #14 ENSPCIG00000015561 #15 ATL3 (ENSPCIG00000015551) #16 PLAAT3 (ENSPCIG00000031587) #17 ENSPCIG00000015546 ENSPCIG00000015542 LGALS12 (ENSPCIG00000015539) #20 ENSPCIG00000015537 ##23 SLC22A8 (ENSPCIG00000015222) #22 SLC22A6 (ENSPCIG00000015223) #23 ENSPCIG00000017646 ##22 ENSPCIG00000017645 CHRM1 (ENSPCIG00000017643) #24 SLC3A2 (ENSPCIG00000018245) #25 WDR74 (ENSPCIG00000018719) #26 STX5 (ENSPCIG00000018721) #27 ENSPCIG00000015226 #28 TMEM223 (ENSPCIG00000015231) #29 TMEM179B (ENSPCIG00000015233) #30 TAF6L (ENSPCIG00000015237) #31 ENSPCIG00000036190 POLR2G (ENSPCIG00000015245) #32 ZBTB3 (ENSPCIG00000015249) #33 TTC9C (ENSPCIG00000015251) #34 Wallaby MODERN SPECIES 5615 SLC22A8 (ENSMEUG00000001146) #22 Tasmanian devil MODERN SPECIES 5 FLRT1 (ENSSHAG00000023343) #7 OTUB1 (ENSSHAG00000031213) #8 NAA40 (ENSSHAG00000005153) #10 ENSSHAG00000004812 MARK2 (ENSSHAG00000005716) #12 RCOR2 (ENSSHAG00000020586) #11 SPINDOC (ENSSHAG00000006662) #13 ZFTA (ENSSHAG00000022871) #14 ENSSHAG00000021781 #15 ATL3 (ENSSHAG00000002162) #16 ENSSHAG00000020987 #17 ENSSHAG00000022686 LGALS12 (ENSSHAG00000004703) #20 ENSSHAG00000005173 ##23 ENSSHAG00000032003 SLC22A8 (ENSSHAG00000006603) #22 SLC22A6 (ENSSHAG00000007804) #23 ENSSHAG00000022689 ##22 CHRM1 (ENSSHAG00000021922) #24 ENSSHAG00000022006 SLC3A2 (ENSSHAG00000007209) #25 STX5 (ENSSHAG00000024697) #27 WDR74 (ENSSHAG00000026668) #26 ENSSHAG00000006407 #28 TMEM223 (ENSSHAG00000025382) #29 TMEM179B (ENSSHAG00000006311) #30 TAF6L (ENSSHAG00000031966) #31 POLR2G (ENSSHAG00000006006) #32 ENSSHAG00000005891 ZBTB3 (ENSSHAG00000029780) #33 HNRNPUL2 (ENSSHAG00000005445) #35 Amniota DUPLICATION Amniota ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.a ##22 Sauria ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.a ##22 Archelosauria ANCESTRAL SPECIES 38 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028 ENSGT01030000234598.b.b ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157941 ENSGT00940000162373 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00940000157004 #23 ENSGT00620000087966.b ENSGT00940000156764.b ENSGT00940000158249 ENSGT01030000234517.G ENSGT00930000151054 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000155978.b ENSGT01090000260186 ENSGT00940000160483 ENSGT00950000183148.b.a ENSGT00940000157258 ENSGT00940000162250 ENSGT00390000014237 Cryptodira ANCESTRAL SPECIES 17 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028 ENSGT01030000234598.b.b ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157941 ENSGT00940000162373 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00940000157004 #23 ENSGT00620000087966.b ENSGT00940000156764.b ENSGT00940000158249 ENSGT01030000234517.G ENSGT00930000151054 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000162651 ENSGT00940000155978.b ENSGT01090000260186 ENSGT00940000160483 ENSGT00950000183148.b.a ENSGT00940000157258 ENSGT00940000162250 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028.d ENSGT01030000234598.b.b ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157941 ENSGT00940000164485 ENSGT00940000162373 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00940000157004 #23 ENSGT00620000087966.b ENSGT00940000156764.b ENSGT00940000158249 ENSGT01030000234517.G.g.a ENSGT00930000151054 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000162651 ENSGT00940000155978.b ENSGT01090000260186 ENSGT00940000160483 ENSGT00950000183148.b.a ENSGT00940000157258 ENSGT00940000162250 Emydidae ANCESTRAL SPECIES 13 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028.c ENSGT01030000234598.b.b ENSGT00940000154790.a.b ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157941 ENSGT00940000164485 ENSGT00940000162373 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00940000157004 #23 ENSGT00620000087966.b ENSGT00940000156764.b Three-toed box turtle MODERN SPECIES 33 FAU (ENSTMTG00000002567) ZNHIT2 (ENSTMTG00000002573) TM7SF2 (ENSTMTG00000002585) ENSTMTG00000002591 VPS51 (ENSTMTG00000002597) ZFPL1 (ENSTMTG00000002607) ENSTMTG00000002612 ENSTMTG00000002618 SAC3D1 (ENSTMTG00000002623) SNX15 (ENSTMTG00000002628) ARL2 (ENSTMTG00000002634) ENSTMTG00000002640 ENSTMTG00000002643 GPHA2 (ENSTMTG00000002649) PPP2R5B (ENSTMTG00000002653) ENSTMTG00000002660 ##22 ENSTMTG00000002676 #23 ATG2A (ENSTMTG00000002761) ENSTMTG00000002823 ENSTMTG00000002834 EHD1 (ENSTMTG00000002871) CDC42BPG (ENSTMTG00000002953) SCYL1 (ENSTMTG00000003827) FRMD8 (ENSTMTG00000003858) SLC25A45 (ENSTMTG00000003882) TIGD3 (ENSTMTG00000003902) NRXN2 (ENSTMTG00000003926) ENSTMTG00000004089 RASGRP2 (ENSTMTG00000004104) PYGM (ENSTMTG00000004218) SF1 (ENSTMTG00000003098) painted turtle MODERN SPECIES 2386 ZNHIT2 (ENSCPBG00000023638) TM7SF2 (ENSCPBG00000023641) ENSCPBG00000023643 VPS51 (ENSCPBG00000023645) ZFPL1 (ENSCPBG00000023648) CDCA5 (ENSCPBG00000023649) NAALADL1 (ENSCPBG00000023654) ENSCPBG00000023657 SAC3D1 (ENSCPBG00000023660) SNX15 (ENSCPBG00000023662) ARL2 (ENSCPBG00000023664) ENSCPBG00000023666 ENSCPBG00000023667 GPHA2 (ENSCPBG00000023669) PPP2R5B (ENSCPBG00000023672) ENSCPBG00000023677 ##22 ENSCPBG00000023679 #23 ATG2A (ENSCPBG00000023681) ENSCPBG00000023685 ENSCPBG00000023687 EHD1 (ENSCPBG00000023692) ENSCPBG00000023693 ENSCPBG00000023696 ENSCPBG00000023704 SCYL1 (ENSCPBG00000023747) FRMD8 (ENSCPBG00000023753) SLC25A45 (ENSCPBG00000023754) TIGD3 (ENSCPBG00000023755) NRXN2 (ENSCPBG00000023756) ENSCPBG00000023758 ENSCPBG00000023759 Testudinidae ANCESTRAL SPECIES 5 ENSGT00390000007479.`b ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028.d ENSGT01030000234598.b.b ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157941 ENSGT00940000164485 ENSGT00940000162373 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00940000157004.c #23 ENSGT00620000087966.b ENSGT00940000156764.b ENSGT00940000158249 ENSGT01030000234517.G.g.a ENSGT00930000151054 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000162651 ENSGT00940000155978.b ENSGT00940000160483 ENSGT00950000183148.b.a ENSGT00940000157258 ENSGT00940000162250.f ENSGT00940000162250.e Abingdon island giant tortoise MODERN SPECIES 142 ENSCABG00000021398 VPS51 (ENSCABG00000021400) ZFPL1 (ENSCABG00000021403) ENSCABG00000021404 NAALADL1 (ENSCABG00000021408) SAC3D1 (ENSCABG00000021414) SNX15 (ENSCABG00000021417) ARL2 (ENSCABG00000021422) ENSCABG00000021423 ENSCABG00000021424 GPHA2 (ENSCABG00000021427) PPP2R5B (ENSCABG00000021429) ENSCABG00000021430 ##22 ENSCABG00000021431 #23 ATG2A (ENSCABG00000021434) ENSCABG00000021438 ENSCABG00000021439 ENSCABG00000021442 EHD1 (ENSCABG00000021446) ENSCABG00000021449 ENSCABG00000021454 SCYL1 (ENSCABG00000021458) FRMD8 (ENSCABG00000021464) SLC25A45 (ENSCABG00000021471) TIGD3 (ENSCABG00000021472) NRXN2 (ENSCABG00000021473) ENSCABG00000021478 ENSCABG00000021479 Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 2112 SYVN1 (ENSPSIG00000006560) ENSPSIG00000006533 FAU (ENSPSIG00000006273) ZNHIT2 (ENSPSIG00000006244) TM7SF2 (ENSPSIG00000006053) VPS51 (ENSPSIG00000005609) ZFPL1 (ENSPSIG00000005590) CDCA5 (ENSPSIG00000005587) NAALADL1 (ENSPSIG00000015629) SAC3D1 (ENSPSIG00000015519) SNX15 (ENSPSIG00000015265) ARL2 (ENSPSIG00000014976) ENSPSIG00000000636 GPHA2 (ENSPSIG00000014903) PPP2R5B (ENSPSIG00000013331) ENSPSIG00000012309 ##22 ATG2A (ENSPSIG00000009275) ENSPSIG00000008962 ENSPSIG00000006386 EHD1 (ENSPSIG00000005727) CDC42BPG (ENSPSIG00000013101) SCYL1 (ENSPSIG00000012868) SLC25A45 (ENSPSIG00000012132) ENSPSIG00000012127 ENSPSIG00000012113 Chinese turtle MODERN SPECIES 1909 ENSPSIG00000000077 ENSPSIG00000000076 ENSPSIG00000015633 ENSPSIG00000015462 ##22 ENSPSIG00000015443 ENSPSIG00000000075 Archosauria ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.a ##22 Australian saltwater crocodile MODERN SPECIES 7 CDK4 (ENSCPRG00005004033) TSPAN31 (ENSCPRG00005004031) ENSCPRG00005004029 AGAP2 (ENSCPRG00005004018) ENSCPRG00005004014 ENSCPRG00005004008 B4GALNT1 (ENSCPRG00005004004) ENSCPRG00005003983 ENSCPRG00005003979 ENSCPRG00005003977 ENSCPRG00005003921 ENSCPRG00005003898 ENSCPRG00005003894 NAALADL1 (ENSCPRG00005003868) ENSCPRG00005003856 ENSCPRG00005003850 ##22 ENSCPRG00005003846 ENSCPRG00005003843 ENSCPRG00005003840 ENSCPRG00005003835 ENSCPRG00005003825 RACGAP1 (ENSCPRG00005003815) ASIC1 (ENSCPRG00005003809) ENSCPRG00005003759 SMARCD1 (ENSCPRG00005003631) GPD1 (ENSCPRG00005003613) ENSCPRG00005003610 CERS5 (ENSCPRG00005003606) LIMA1 (ENSCPRG00005003602) LARP4 (ENSCPRG00005003596) DIP2B (ENSCPRG00005002292) Lepidosauria ANCESTRAL SPECIES 107 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00620000087966.b ENSGT00940000158249 ENSGT01030000234517.G ENSGT00930000151054 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000155978.b ENSGT01090000260186 ENSGT00940000160483 ENSGT00950000183148.b.a ENSGT00940000157258 ENSGT00940000162250 ENSGT00390000014237 ENSGT00940000160285 ENSGT00940000160644 Episquamata ANCESTRAL SPECIES 28 ENSGT00390000007552 ENSGT00940000154902 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00620000087966.b ENSGT00940000158249 ENSGT01030000234517.G ENSGT00930000151054 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000155978.b ENSGT01090000260186 ENSGT00940000160483 ENSGT00950000183148.b.a ENSGT00940000157258 ENSGT00940000162250 ENSGT00390000014237 ENSGT00940000160285 ENSGT00940000160644 Toxicofera ANCESTRAL SPECIES 78 ENSGT00390000007552 ENSGT00940000154902 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00620000087966.b ENSGT00940000168352 Elapidae ANCESTRAL SPECIES 55 ENSGT00390000009753 ENSGT00390000001738 ENSGT00940000162464 ENSGT00390000000417.a.a.b.a.a.b ENSGT00390000017147 ENSGT00390000007479 ENSGT00390000017253 ENSGT00390000007552 ENSGT00940000154902 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00620000087966.b ENSGT00940000168352 Elapidae_a ANCESTRAL SPECIES 119 ENSGT00390000009753 ENSGT00390000001738 ENSGT00940000162464 ENSGT00390000000417.a.a.b.a.a.b ENSGT00390000017147 ENSGT00390000007479 ENSGT00390000017253 ENSGT00390000007552 ENSGT00940000154902 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00620000087966.b ENSGT00940000168352 Acanthophiinae ANCESTRAL SPECIES 111 ENSGT00390000009753 ENSGT00390000001738 ENSGT00940000162464 ENSGT00390000000417.a.a.b.a.a.b ENSGT00390000017147 ENSGT00390000007479 ENSGT00390000017253 ENSGT00390000007552 ENSGT00940000154902 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00620000087966.b ENSGT00940000168352 Eastern brown snake MODERN SPECIES 96 ENSPTXG00000016544 TM7SF2 (ENSPTXG00000016535) ZNHIT2 (ENSPTXG00000016529) FAU (ENSPTXG00000016527) MRPL49 (ENSPTXG00000016524) ENSPTXG00000016522 ENSPTXG00000016521 ENSPTXG00000016519 ENSPTXG00000016515 SAC3D1 (ENSPTXG00000016512) ARL2 (ENSPTXG00000016510) SNX15 (ENSPTXG00000016507) ENSPTXG00000016505 GPHA2 (ENSPTXG00000016503) PPP2R5B (ENSPTXG00000016501) ENSPTXG00000016498 ##22 ATG2A (ENSPTXG00000016494) ENSPTXG00000016490 ENSPTXG00000016488 PC (ENSPTXG00000016469) ENSPTXG00000016468 ENSPTXG00000016467 HAPLN2 (ENSPTXG00000016465) RHBG (ENSPTXG00000016463) MEF2D (ENSPTXG00000016452) IQGAP3 (ENSPTXG00000016444) UBQLN4 (ENSPTXG00000016442) LAMTOR2 (ENSPTXG00000016441) RAB25 (ENSPTXG00000016440) ENSPTXG00000016439 ENSPTXG00000016437 Mainland tiger snake MODERN SPECIES 265 ENSNSUG00000000343 GPHA2 (ENSNSUG00000000347) PPP2R5B (ENSNSUG00000000357) ENSNSUG00000002041 ##22 ATG2A (ENSNSUG00000002057) ENSNSUG00000002120 PC (ENSNSUG00000002123) ENSNSUG00000002208 ENSNSUG00000002213 ENSNSUG00000002214 HAPLN2 (ENSNSUG00000002218) RHBG (ENSNSUG00000002224) MEF2D (ENSNSUG00000002226) ENSNSUG00000002233 ENSNSUG00000002240 NAXE (ENSNSUG00000002248) UBQLN4 (ENSNSUG00000002251) LAMTOR2 (ENSNSUG00000002262) ENSNSUG00000002265 Blue-lipped sea krait MODERN SPECIES 4108 GPHA2 (ENSLLTG00000002279) PPP2R5B (ENSLLTG00000002269) ENSLLTG00000002264 ##22 Lizard MODERN SPECIES 1816 ENSACAG00000045224 ENSACAG00000008091 ##22 Laterata ANCESTRAL SPECIES 60 ENSGT00390000007552 ENSGT00940000154902 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00620000087966.b ENSGT00940000158249 ENSGT01030000234517.G ENSGT00930000151054 ENSGT00390000003837 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000155978.b ENSGT01090000260186 ENSGT00940000160483 ENSGT00950000183148.b.a ENSGT00940000157258 ENSGT00940000162250 ENSGT00390000017253 ENSGT00390000007479 Common wall lizard MODERN SPECIES 7 GLMP (ENSPMRG00000018637) CCT3 (ENSPMRG00000018628) ENSPMRG00000018624 SSR2 (ENSPMRG00000018621) CST6 (ENSPMRG00000018614) NAALADL1 (ENSPMRG00000018264) EEF1G (ENSPMRG00000018217) ENSPMRG00000018212 AHNAK (ENSPMRG00000018207) SAC3D1 (ENSPMRG00000018206) ARL2 (ENSPMRG00000018200) SNX15 (ENSPMRG00000018184) ENSPMRG00000018172 ENSPMRG00000018169 PPP2R5B (ENSPMRG00000018160) ENSPMRG00000018145 ##22 ATG2A (ENSPMRG00000018117) EHD1 (ENSPMRG00000018098) CDC42BPG (ENSPMRG00000016721) SCYL1 (ENSPMRG00000016541) ENSPMRG00000016533 ENSPMRG00000016527 ENSPMRG00000016509 FRMD8 (ENSPMRG00000016497) SLC25A45 (ENSPMRG00000016486) NRXN2 (ENSPMRG00000016063) RASGRP2 (ENSPMRG00000015942) ENSPMRG00000015931 PYGM (ENSPMRG00000015911) SF1 (ENSPMRG00000015892) MAP4K2 (ENSPMRG00000015521) Amniota DUPLICATION Amniota DUPLICATION Amniota ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.b.a.a ##22 Sauria ANCESTRAL SPECIES 40 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 Lepidosauria ANCESTRAL SPECIES 87 ENSGT00390000015815 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00940000163054.b ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 tuatara DUPLICATION tuatara MODERN SPECIES 1099 ENSSPUG00000000486 ENSSPUG00000000492 ENSSPUG00000000496 ENSSPUG00000000512 ENSSPUG00000000523 ENSSPUG00000000529 ENSSPUG00000000539 ENSSPUG00000000549 ENSSPUG00000000562 SYVN1 (ENSSPUG00000000566) CAPN1 (ENSSPUG00000000579) ENSSPUG00000000587 ENSSPUG00000000600 ENSSPUG00000000606 AP5B1 (ENSSPUG00000000608) ENSSPUG00000000637 ##22 ENSSPUG00000000660 ##22 ENSSPUG00000000702 ##22 ENSSPUG00000000706 ##22 ENSSPUG00000000714 ##22 DPF2 (ENSSPUG00000000759) POLA2 (ENSSPUG00000000790) ENSSPUG00000000842 KAT5 (ENSSPUG00000000847) ENSSPUG00000000958 ENSSPUG00000000963 CRABP2 (ENSSPUG00000000974) ISG20L2 (ENSSPUG00000000985) MRPL24 (ENSSPUG00000001037) HDGF (ENSSPUG00000001042) PRCC (ENSSPUG00000001049) tuatara DUPLICATION tuatara MODERN SPECIES 1099 ENSSPUG00000000512 ENSSPUG00000000523 ENSSPUG00000000529 ENSSPUG00000000539 ENSSPUG00000000549 ENSSPUG00000000562 SYVN1 (ENSSPUG00000000566) CAPN1 (ENSSPUG00000000579) ENSSPUG00000000587 ENSSPUG00000000600 ENSSPUG00000000606 AP5B1 (ENSSPUG00000000608) ENSSPUG00000000637 ##22 ENSSPUG00000000660 ##22 ENSSPUG00000000702 ##22 ENSSPUG00000000706 ##22 ENSSPUG00000000714 ##22 DPF2 (ENSSPUG00000000759) POLA2 (ENSSPUG00000000790) ENSSPUG00000000842 KAT5 (ENSSPUG00000000847) ENSSPUG00000000958 ENSSPUG00000000963 CRABP2 (ENSSPUG00000000974) ISG20L2 (ENSSPUG00000000985) MRPL24 (ENSSPUG00000001037) HDGF (ENSSPUG00000001042) PRCC (ENSSPUG00000001049) SH2D2A (ENSSPUG00000001057) ENSSPUG00000001082 NTRK1 (ENSSPUG00000001153) tuatara MODERN SPECIES 1099 ENSSPUG00000000496 ENSSPUG00000000512 ENSSPUG00000000523 ENSSPUG00000000529 ENSSPUG00000000539 ENSSPUG00000000549 ENSSPUG00000000562 SYVN1 (ENSSPUG00000000566) CAPN1 (ENSSPUG00000000579) ENSSPUG00000000587 ENSSPUG00000000600 ENSSPUG00000000606 AP5B1 (ENSSPUG00000000608) ENSSPUG00000000637 ##22 ENSSPUG00000000660 ##22 ENSSPUG00000000702 ##22 ENSSPUG00000000706 ##22 ENSSPUG00000000714 ##22 DPF2 (ENSSPUG00000000759) POLA2 (ENSSPUG00000000790) ENSSPUG00000000842 KAT5 (ENSSPUG00000000847) ENSSPUG00000000958 ENSSPUG00000000963 CRABP2 (ENSSPUG00000000974) ISG20L2 (ENSSPUG00000000985) MRPL24 (ENSSPUG00000001037) HDGF (ENSSPUG00000001042) PRCC (ENSSPUG00000001049) SH2D2A (ENSSPUG00000001057) ENSSPUG00000001082 Episquamata ANCESTRAL SPECIES 19 ENSGT00940000159437 ENSGT00390000015815 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01100000263573.b.b ENSGT01030000234540.C ENSGT00940000161712.a Laterata ANCESTRAL SPECIES 62 ENSGT00940000162317 ENSGT00940000160034 ENSGT00550000074954 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00940000154556 ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000163054.b ENSGT00960000189006 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 Common wall lizard MODERN SPECIES 7 DPP3 (ENSPMRG00000015191) BBS1 (ENSPMRG00000015200) ENSPMRG00000015208 ENSPMRG00000015216 FOSL1 (ENSPMRG00000015223) CCDC85B (ENSPMRG00000015226) FIBP (ENSPMRG00000015231) EFEMP2 (ENSPMRG00000015236) MUS81 (ENSPMRG00000015240) ENSPMRG00000015247 ENSPMRG00000015252 CFL1 (ENSPMRG00000015255) CD248 (ENSPMRG00000015263) AP5B1 (ENSPMRG00000015266) OVOL1 (ENSPMRG00000015270) ENSPMRG00000015277 ##22 ENSPMRG00000015281 ##22 ENSPMRG00000015284 ##22 ENSPMRG00000015298 ##22 ENSPMRG00000015308 ##22 CHRM1 (ENSPMRG00000015315) #24 DPF2 (ENSPMRG00000015322) CDC42EP2 (ENSPMRG00000015335) POLA2 (ENSPMRG00000015344) ENSPMRG00000015363 CDCA5 (ENSPMRG00000015393) ZFPL1 (ENSPMRG00000015397) VPS51 (ENSPMRG00000015399) ENSPMRG00000015412 TM7SF2 (ENSPMRG00000015418) ZNHIT2 (ENSPMRG00000015430) Argentine black and white tegu MODERN SPECIES 80 CCDC85B (ENSSMRG00000020376) FOSL1 (ENSSMRG00000020375) ENSSMRG00000020374 ENSSMRG00000020372 BBS1 (ENSSMRG00000020371) DPP3 (ENSSMRG00000020370) PELI3 (ENSSMRG00000020369) ENSSMRG00000020368 DRAP1 (ENSSMRG00000020367) C11orf68 (ENSSMRG00000020366) ENSSMRG00000020365 RELA (ENSSMRG00000020364) ENSSMRG00000020363 AP5B1 (ENSSMRG00000020362) OVOL1 (ENSSMRG00000020361) ENSSMRG00000020360 ##22 ENSSMRG00000020359 ##22 ENSSMRG00000020358 ##22 ENSSMRG00000020357 ##22 CHRM1 (ENSSMRG00000020355) #24 DPF2 (ENSSMRG00000020354) POLA2 (ENSSMRG00000020352) RBM14 (ENSSMRG00000020351) CCS (ENSSMRG00000020350) ENSSMRG00000020349 ENSSMRG00000020348 SPTBN2 (ENSSMRG00000020347) ENSSMRG00000020346 RCE1 (ENSSMRG00000020343) ACTN3 (ENSSMRG00000020342) ENSSMRG00000020340 Toxicofera ANCESTRAL SPECIES 28 ENSGT00940000159437 ENSGT00390000015815 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 Elapidae ANCESTRAL SPECIES 27 ENSGT00940000159437 ENSGT00390000015815 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 Elapidae_a ANCESTRAL SPECIES 43 ENSGT00940000159437 ENSGT00390000015815 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00390000005498 ENSGT00940000159437 ENSGT00390000015815 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Mainland tiger snake MODERN SPECIES 731 ENSNSUG00000000936 ENSNSUG00000000934 AP5B1 (ENSNSUG00000000920) OVOL1 (ENSNSUG00000000919) ENSNSUG00000000787 ##22 Eastern brown snake MODERN SPECIES 85 ENSPTXG00000010978 EFEMP2 (ENSPTXG00000010977) FIBP (ENSPTXG00000010975) ENSPTXG00000010974 FOSL1 (ENSPTXG00000010973) BBS1 (ENSPTXG00000010881) ENSPTXG00000010872 DPP3 (ENSPTXG00000010869) PELI3 (ENSPTXG00000010866) DRAP1 (ENSPTXG00000010864) C11orf68 (ENSPTXG00000010863) RELA (ENSPTXG00000010343) KAT5 (ENSPTXG00000010339) ENSPTXG00000010338 AP5B1 (ENSPTXG00000010337) ENSPTXG00000010336 ##22 ENSPTXG00000010331 ##22 ENSPTXG00000010225 ##22 ENSPTXG00000010206 ##22 ENSPTXG00000010123 ##22 DPF2 (ENSPTXG00000010121) CDC42EP2 (ENSPTXG00000010120) ENSPTXG00000010119 CAPN1 (ENSPTXG00000010118) SPDYC (ENSPTXG00000010117) SYVN1 (ENSPTXG00000010116) SLAMF8 (ENSPTXG00000010114) CFAP45 (ENSPTXG00000010113) ENSPTXG00000010112 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010091 Blue-lipped sea krait MODERN SPECIES 5737 OVOL1 (ENSLLTG00000015715) ENSLLTG00000015730 ##22 ENSLLTG00000015771 ##22 ENSLLTG00000003127 ##22 TAGLN2 (ENSLLTG00000003142) CFAP45 (ENSLLTG00000003162) ENSLLTG00000003175 ENSLLTG00000003185 SLAMF8 (ENSLLTG00000003209) SYVN1 (ENSLLTG00000003234) SPDYC (ENSLLTG00000003290) CAPN1 (ENSLLTG00000003332) ENSLLTG00000003375 Indian cobra MODERN SPECIES 17 FOSL1 (ENSNNAG00000016109) CTSW (ENSNNAG00000016157) ENSNNAG00000016168 ENSNNAG00000016176 ENSNNAG00000003873 DPP3 (ENSNNAG00000003999) PELI3 (ENSNNAG00000004868) ENSNNAG00000004888 ENSNNAG00000004908 C11orf68 (ENSNNAG00000004981) RELA (ENSNNAG00000004992) ENSNNAG00000005022 ENSNNAG00000005042 AP5B1 (ENSNNAG00000005057) OVOL1 (ENSNNAG00000005073) ENSNNAG00000005118 ##22 ENSNNAG00000005405 ##22 ENSNNAG00000005756 ##22 ENSNNAG00000006165 ##22 ENSNNAG00000006513 ##22 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) Lizard DUPLICATION Lizard MODERN SPECIES 1278 ENSACAG00000022853 ENSACAG00000027251 ENSACAG00000035268 ENSACAG00000040978 ENSACAG00000013956 ##22 ENSACAG00000045200 ENSACAG00000044737 Lizard DUPLICATION Lizard MODERN SPECIES 1861 ENSACAG00000006309 ENSACAG00000026822 ##22 ENSACAG00000031439 ##22 Lizard MODERN SPECIES 193 ENSACAG00000006380 ##22 ENSACAG00000040271 ##22 Archelosauria ANCESTRAL SPECIES 38 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b Archosauria ANCESTRAL SPECIES 76 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000008975 #32 ENSGT00390000007552 ENSGT00940000154902 Aves ANCESTRAL SPECIES 70 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000008975 #32 ENSGT00390000007552 ENSGT00940000154902 African ostrich MODERN SPECIES 508 ENSSCUG00000006058 ##22 SLC22A8 (ENSSCUG00000006061) ##22 ENSSCUG00000006066 ENSSCUG00000006068 POLA2 (ENSSCUG00000006069) ENSSCUG00000006073 SPDYC (ENSSCUG00000006075) SYVN1 (ENSSCUG00000006078) Neognathae ANCESTRAL SPECIES 46 ENSGT00940000154911 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00980000200147 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000162343 ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 Neognathae_b ANCESTRAL SPECIES 39 ENSGT00940000160376 #35 ENSGT00390000012589 #29 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00980000200147 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000006979.a #8 ENSGT00940000159375 #7 ENSGT00940000154911 ENSGT00390000013444.a.b.b ENSGT00390000002731 ENSGT00930000151054 Passeriformes ANCESTRAL SPECIES 43 ENSGT01100000263497.B #36 ENSGT00940000160376 #35 ENSGT00390000012589 #29 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #31 ENSGT00390000006979.a #8 ENSGT00940000159375 #7 ENSGT00940000154911 Passeriformes_d ANCESTRAL SPECIES 38 ENSGT01100000263497.B #36 ENSGT00940000160376 #35 ENSGT00390000012589 #29 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #31 ENSGT00390000006979.a #8 ENSGT00940000159375 #7 ENSGT00940000154911 Passeriformes_g ANCESTRAL SPECIES 44 ENSGT01100000263497.B #36 ENSGT00940000160376 #35 ENSGT00390000012589 #29 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #31 ENSGT00390000006979.a #8 ENSGT00940000159375 #7 ENSGT00940000154911 Medium ground finch MODERN SPECIES 435 ENSGFOG00000013454 ##22 ENSGFOG00000013435 ##22 DPF2 (ENSGFOG00000013426) CDC42EP2 (ENSGFOG00000013422) POLA2 (ENSGFOG00000013415) CAPN1 (ENSGFOG00000013412) SYVN1 (ENSGFOG00000013408) Passeroidea ANCESTRAL SPECIES 54 ENSGT01100000263497.B #36 ENSGT00940000160376 #35 ENSGT00390000012589 #29 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070.c Zebra finch MODERN SPECIES 38 ENSTGUG00000024709 #29 ENSTGUG00000027721 #28 ENSTGUG00000025536 ENSTGUG00000024672 ENSTGUG00000025402 ENSTGUG00000019144 #10 ENSTGUG00000023367 ENSTGUG00000018975 #11 ENSTGUG00000026804 #12 ENSTGUG00000021779 #15 ENSTGUG00000028550 ENSTGUG00000024470 ENSTGUG00000029491 ENSTGUG00000023063 ENSTGUG00000028070 ENSTGUG00000026404 ##22 ENSTGUG00000020056 ##22 ENSTGUG00000022802 ##22 ENSTGUG00000025700 ENSTGUG00000028595 ENSTGUG00000024413 ENSTGUG00000028151 MRPL49 (ENSTGUG00000021342) ENSTGUG00000016038 ENSTGUG00000027373 ENSTGUG00000026586 ENSTGUG00000019970 ENSTGUG00000021341 ENSTGUG00000020752 ENSTGUG00000016898 OTUB1 (ENSTGUG00000025728) #8 Common canary DUPLICATION Common canary MODERN SPECIES 12 IGDCC4 (ENSSCAG00000010185) DPP8 (ENSSCAG00000010189) HACD3 (ENSSCAG00000010199) INTS14 (ENSSCAG00000010200) SLC24A1 (ENSSCAG00000010206) DENND4A (ENSSCAG00000010214) RAB11A (ENSSCAG00000010226) MEGF11 (ENSSCAG00000010255) DIS3L (ENSSCAG00000010324) TIPIN (ENSSCAG00000010328) MAP2K1 (ENSSCAG00000010333) ENSSCAG00000010341 RPL4 (ENSSCAG00000010344) ZWILCH (ENSSCAG00000010364) LCTL (ENSSCAG00000010374) ENSSCAG00000010394 ##22 ENSSCAG00000010404 ##22 SMAD6 (ENSSCAG00000010407) SMAD3 (ENSSCAG00000010414) AAGAB (ENSSCAG00000010418) IQCH (ENSSCAG00000010432) ENSSCAG00000010438 MAP2K5 (ENSSCAG00000010448) PIAS1 (ENSSCAG00000010481) CALML4 (ENSSCAG00000010490) ENSSCAG00000010493 ENSSCAG00000010498 ENSSCAG00000010505 ITGA11 (ENSSCAG00000010528) CORO2B (ENSSCAG00000010620) ENSSCAG00000010637 Common canary MODERN SPECIES 12 DPP8 (ENSSCAG00000010189) HACD3 (ENSSCAG00000010199) INTS14 (ENSSCAG00000010200) SLC24A1 (ENSSCAG00000010206) DENND4A (ENSSCAG00000010214) RAB11A (ENSSCAG00000010226) MEGF11 (ENSSCAG00000010255) DIS3L (ENSSCAG00000010324) TIPIN (ENSSCAG00000010328) MAP2K1 (ENSSCAG00000010333) ENSSCAG00000010341 RPL4 (ENSSCAG00000010344) ZWILCH (ENSSCAG00000010364) LCTL (ENSSCAG00000010374) ENSSCAG00000010394 ##22 ENSSCAG00000010404 ##22 SMAD6 (ENSSCAG00000010407) SMAD3 (ENSSCAG00000010414) AAGAB (ENSSCAG00000010418) IQCH (ENSSCAG00000010432) ENSSCAG00000010438 MAP2K5 (ENSSCAG00000010448) PIAS1 (ENSSCAG00000010481) CALML4 (ENSSCAG00000010490) ENSSCAG00000010493 ENSSCAG00000010498 ENSSCAG00000010505 ITGA11 (ENSSCAG00000010528) CORO2B (ENSSCAG00000010620) ENSSCAG00000010637 NOX5 (ENSSCAG00000010650) Neognathae_c ANCESTRAL SPECIES 47 ENSGT00960000192922 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479.cb ENSGT00390000015119 #26 Golden eagle MODERN SPECIES 63 ENSACCG00020016957 DRAP1 (ENSACCG00020012253) ENSACCG00020012269 ##22 ENSACCG00020012301 ##22 ENSACCG00020012339 ##22 DPF2 (ENSACCG00020012404) CDC42EP2 (ENSACCG00020012469) POLA2 (ENSACCG00020012493) CAPN1 (ENSACCG00020012546) SPDYC (ENSACCG00020012590) SYVN1 (ENSACCG00020012628) ENSACCG00020012688 Kakapo MODERN SPECIES 75 HSD17B10 (ENSSHBG00005008270) PFKFB1 (ENSSHBG00005008286) ENSSHBG00005008296 GNL3L (ENSSHBG00005008311) HUWE1 (ENSSHBG00005009089) NDUFB11 (ENSSHBG00005019046) RBM10 (ENSSHBG00005019052) ENSSHBG00005019288 ENSSHBG00005019289 ENSSHBG00005019291 CDK16 (ENSSHBG00005019294) ENSSHBG00005019295 ENSSHBG00005019297 RELA (ENSSHBG00005019302) DRAP1 (ENSSHBG00005019305) ENSSHBG00005019307 ##22 ENSSHBG00005019310 ##22 ENSSHBG00005019314 DPF2 (ENSSHBG00005019320) CDC42EP2 (ENSSHBG00005019329) POLA2 (ENSSHBG00005019332) CAPN1 (ENSSHBG00005019338) SYVN1 (ENSSHBG00005019344) ENSSHBG00005019348 MRPL49 (ENSSHBG00005019350) FAU (ENSSHBG00005019353) WDR74 (ENSSHBG00005019356) #26 INTS5 (ENSSHBG00005019375) POLR2G (ENSSHBG00005019378) #32 EEF1G (ENSSHBG00005019380) AHNAK (ENSSHBG00005019382) Galloanserae ANCESTRAL SPECIES 61 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 Phasianidae ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.b.a.a ##22 Phasianidae_b ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.b.a.a ##22 Chicken MODERN SPECIES 63 ENSGALG00010000144 ENSGALG00010000142 ##22 ENSGALG00010000178 ENSGALG00010000175 ##22 DPF2 (ENSGALG00010000171) CDC42EP2 (ENSGALG00010000161) B3GAT3 (ENSGALG00010000150) ENSGALG00010000149 Anatidae ANCESTRAL SPECIES 122 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000161776 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 Pink-footed goose MODERN SPECIES 506 ENSABRG00000011027 ##22 ENSABRG00000011145 ##22 ENSABRG00000011151 ##22 CDC42EP2 (ENSABRG00000000210) CAPN1 (ENSABRG00000000253) SPDYC (ENSABRG00000000377) SYVN1 (ENSABRG00000000386) Duck MODERN SPECIES 561 ENSAPLG00000013770 ##22 Cryptodira ANCESTRAL SPECIES 17 ENSGT00390000006979.a #8 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853 #18 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 2112 LGALS12 (ENSPSIG00000012610) #20 ENSPSIG00000012542 ##22 ENSPSIG00000012508 ##22 ENSPSIG00000012485 ##22 ENSPSIG00000011590 ##22 ENSPSIG00000011491 ##22 CHRM1 (ENSPSIG00000000656) #24 DPF2 (ENSPSIG00000010805) CDC42EP2 (ENSPSIG00000000649) POLA2 (ENSPSIG00000010575) CAPN1 (ENSPSIG00000008053) SPDYC (ENSPSIG00000007826) SYVN1 (ENSPSIG00000006560) ENSPSIG00000006533 FAU (ENSPSIG00000006273) ZNHIT2 (ENSPSIG00000006244) TM7SF2 (ENSPSIG00000006053) VPS51 (ENSPSIG00000005609) Chinese turtle MODERN SPECIES 2112 LGALS12 (ENSPSIG00000012610) #20 ENSPSIG00000012542 ##22 ENSPSIG00000012508 ##22 ENSPSIG00000012485 ##22 ENSPSIG00000011590 ##22 ENSPSIG00000011491 ##22 CHRM1 (ENSPSIG00000000656) #24 DPF2 (ENSPSIG00000010805) CDC42EP2 (ENSPSIG00000000649) POLA2 (ENSPSIG00000010575) CAPN1 (ENSPSIG00000008053) SPDYC (ENSPSIG00000007826) SYVN1 (ENSPSIG00000006560) ENSPSIG00000006533 FAU (ENSPSIG00000006273) ZNHIT2 (ENSPSIG00000006244) TM7SF2 (ENSPSIG00000006053) Testudinoidea ANCESTRAL SPECIES 2 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b #18 ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b Testudinidae ANCESTRAL SPECIES 5 ENSGT01020000231208 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b #18 ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479.`b ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b Goode s thornscrub tortoise MODERN SPECIES 21 NAA40 (ENSGEVG00005012468) #10 RCOR2 (ENSGEVG00005012299) #11 MARK2 (ENSGEVG00005012049) #12 ENSGEVG00005011921 ENSGEVG00005011885 ZFTA (ENSGEVG00005011808) #14 ENSGEVG00005011707 #15 ATL3 (ENSGEVG00005011679) #16 ENSGEVG00005011654 #18 ENSGEVG00005011526 #18 ENSGEVG00005011491 #18 ENSGEVG00005011390 ENSGEVG00005011291 ENSGEVG00005011225 LGALS12 (ENSGEVG00005011151) #20 ENSGEVG00005010707 ##22 ENSGEVG00005010042 ##22 ENSGEVG00005009473 ##22 ENSGEVG00005008720 ##22 CHRM1 (ENSGEVG00005008602) #24 DPF2 (ENSGEVG00005008558) CDC42EP2 (ENSGEVG00005008521) POLA2 (ENSGEVG00005008496) CAPN1 (ENSGEVG00005008420) SPDYC (ENSGEVG00005008396) SYVN1 (ENSGEVG00005008363) ENSGEVG00005008319 MRPL49 (ENSGEVG00005008293) ENSGEVG00005008268 ZNHIT2 (ENSGEVG00005008244) TM7SF2 (ENSGEVG00005008228) Abingdon island giant tortoise MODERN SPECIES 2278 RCOR2 (ENSCABG00000000704) #11 MARK2 (ENSCABG00000000715) #12 ENSCABG00000000726 ENSCABG00000000734 ZFTA (ENSCABG00000000736) #14 ENSCABG00000000737 #15 ATL3 (ENSCABG00000000739) #16 ENSCABG00000000740 #18 ENSCABG00000000743 ENSCABG00000000745 ENSCABG00000000747 ENSCABG00000000756 ENSCABG00000000809 LGALS12 (ENSCABG00000000816) #20 ENSCABG00000000918 ENSCABG00000000934 ##22 ENSCABG00000001060 ##22 ENSCABG00000001301 ##22 ENSCABG00000001338 ##22 ENSCABG00000001482 ##22 CHRM1 (ENSCABG00000001601) #24 DPF2 (ENSCABG00000001614) CDC42EP2 (ENSCABG00000001686) POLA2 (ENSCABG00000001701) CAPN1 (ENSCABG00000001957) SPDYC (ENSCABG00000002961) SYVN1 (ENSCABG00000002965) ENSCABG00000002969 MRPL49 (ENSCABG00000002973) FAU (ENSCABG00000002974) ZNHIT2 (ENSCABG00000002976) Emydidae DUPLICATION Emydidae DUPLICATION Emydidae ANCESTRAL SPECIES 13 ENSGT01020000231208 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a.i.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.a.a.i.b ##22 ENSGT00940000154901.C.b.f.b.a.a.j ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 painted turtle DUPLICATION painted turtle DUPLICATION painted turtle DUPLICATION painted turtle MODERN SPECIES 1835 ENSCPBG00000009484 ##22 painted turtle MODERN SPECIES 1123 ENSCPBG00000018749 ##22 ENSCPBG00000018748 ##22 ENSCPBG00000018746 ##22 ENSCPBG00000018744 ##22 ENSCPBG00000018740 ##22 ENSCPBG00000018738 ##22 painted turtle MODERN SPECIES 1123 ENSCPBG00000018749 ##22 ENSCPBG00000018748 ##22 ENSCPBG00000018746 ##22 ENSCPBG00000018744 ##22 ENSCPBG00000018740 ##22 ENSCPBG00000018738 ##22 painted turtle MODERN SPECIES 2386 ENSCPBG00000023503 NAA40 (ENSCPBG00000023507) #10 RCOR2 (ENSCPBG00000023509) #11 MARK2 (ENSCPBG00000023513) #12 ENSCPBG00000023518 ENSCPBG00000023519 ZFTA (ENSCPBG00000023522) #14 ENSCPBG00000023525 #15 ATL3 (ENSCPBG00000023529) #16 ENSCPBG00000023531 #18 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) #20 ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) Emydidae ANCESTRAL SPECIES 13 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a.i.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.a.a.i.b ##22 ENSGT00940000154901.C.b.f.b.a.a.j ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b Three-toed box turtle MODERN SPECIES 2269 ENSTMTG00000012843 ##22 painted turtle MODERN SPECIES 2386 ENSCPBG00000023519 ZFTA (ENSCPBG00000023522) #14 ENSCPBG00000023525 #15 ATL3 (ENSCPBG00000023529) #16 ENSCPBG00000023531 #18 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) #20 ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 FAU (ENSCPBG00000023637) ZNHIT2 (ENSCPBG00000023638) TM7SF2 (ENSCPBG00000023641) Emydidae ANCESTRAL SPECIES 13 ENSGT00940000155031 #12 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a.i.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.a.a.i.b ##22 ENSGT00940000154901.C.b.f.b.a.a.j ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 Three-toed box turtle MODERN SPECIES 33 ENSTMTG00000002032 NAA40 (ENSTMTG00000002041) #10 RCOR2 (ENSTMTG00000002058) #11 MARK2 (ENSTMTG00000002082) #12 ENSTMTG00000002131 ENSTMTG00000002140 ZFTA (ENSTMTG00000002149) #14 ENSTMTG00000002155 #15 ATL3 (ENSTMTG00000002166) #16 ENSTMTG00000002174 #18 ENSTMTG00000002196 ENSTMTG00000002243 ENSTMTG00000002253 ENSTMTG00000002262 LGALS12 (ENSTMTG00000002278) #20 ENSTMTG00000002287 ##22 ENSTMTG00000002299 ##22 ENSTMTG00000002322 ##22 ENSTMTG00000002391 ##22 CHRM1 (ENSTMTG00000002487) #24 DPF2 (ENSTMTG00000002493) CDC42EP2 (ENSTMTG00000002496) POLA2 (ENSTMTG00000002499) CAPN1 (ENSTMTG00000002515) SPDYC (ENSTMTG00000002540) SYVN1 (ENSTMTG00000002548) ENSTMTG00000002555 MRPL49 (ENSTMTG00000002564) FAU (ENSTMTG00000002567) ZNHIT2 (ENSTMTG00000002573) TM7SF2 (ENSTMTG00000002585) painted turtle MODERN SPECIES 1320 ENSCPBG00000000765 ##22 ENSCPBG00000000637 ##22 Amniota ANCESTRAL SPECIES 67 ENSGT00940000160034 ENSGT00940000162317 ENSGT00390000015815 ENSGT00940000159437 ENSGT00390000005498 ENSGT00950000183000.c.a.a ENSGT00940000162773 ENSGT00940000161363 ENSGT00530000064721 ENSGT00940000162343 ENSGT00940000159867 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00390000001738 ENSGT00390000009753 ENSGT01070000254712 Sauria ANCESTRAL SPECIES 40 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 Lepidosauria ANCESTRAL SPECIES 87 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00940000163054.b ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 Episquamata ANCESTRAL SPECIES 19 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01100000263573.b.b ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Laterata ANCESTRAL SPECIES 62 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00940000154556 ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000163054.b ENSGT00960000189006 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 Argentine black and white tegu MODERN SPECIES 80 ENSSMRG00000020372 BBS1 (ENSSMRG00000020371) DPP3 (ENSSMRG00000020370) PELI3 (ENSSMRG00000020369) ENSSMRG00000020368 DRAP1 (ENSSMRG00000020367) C11orf68 (ENSSMRG00000020366) ENSSMRG00000020365 RELA (ENSSMRG00000020364) ENSSMRG00000020363 AP5B1 (ENSSMRG00000020362) OVOL1 (ENSSMRG00000020361) ENSSMRG00000020360 ##22 ENSSMRG00000020359 ##22 ENSSMRG00000020358 ##22 ENSSMRG00000020357 ##22 CHRM1 (ENSSMRG00000020355) #24 DPF2 (ENSSMRG00000020354) POLA2 (ENSSMRG00000020352) RBM14 (ENSSMRG00000020351) CCS (ENSSMRG00000020350) ENSSMRG00000020349 ENSSMRG00000020348 SPTBN2 (ENSSMRG00000020347) ENSSMRG00000020346 RCE1 (ENSSMRG00000020343) ACTN3 (ENSSMRG00000020342) ENSSMRG00000020340 SF3B2 (ENSSMRG00000020336) GAL3ST3 (ENSSMRG00000020335) ENSSMRG00000020334 Common wall lizard MODERN SPECIES 7 FOSL1 (ENSPMRG00000015223) CCDC85B (ENSPMRG00000015226) FIBP (ENSPMRG00000015231) EFEMP2 (ENSPMRG00000015236) MUS81 (ENSPMRG00000015240) ENSPMRG00000015247 ENSPMRG00000015252 CFL1 (ENSPMRG00000015255) CD248 (ENSPMRG00000015263) AP5B1 (ENSPMRG00000015266) OVOL1 (ENSPMRG00000015270) ENSPMRG00000015277 ##22 ENSPMRG00000015281 ##22 ENSPMRG00000015284 ##22 ENSPMRG00000015298 ##22 ENSPMRG00000015308 ##22 CHRM1 (ENSPMRG00000015315) #24 DPF2 (ENSPMRG00000015322) CDC42EP2 (ENSPMRG00000015335) POLA2 (ENSPMRG00000015344) ENSPMRG00000015363 CDCA5 (ENSPMRG00000015393) ZFPL1 (ENSPMRG00000015397) VPS51 (ENSPMRG00000015399) ENSPMRG00000015412 TM7SF2 (ENSPMRG00000015418) ZNHIT2 (ENSPMRG00000015430) FAU (ENSPMRG00000015437) ENSPMRG00000015443 ENSPMRG00000015451 MAP4K2 (ENSPMRG00000015521) Toxicofera ANCESTRAL SPECIES 28 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 Elapidae ANCESTRAL SPECIES 27 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 ENSGT00940000161329 Elapidae_a ANCESTRAL SPECIES 43 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT00940000169892 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00940000160034 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b Eastern brown snake MODERN SPECIES 85 FOSL1 (ENSPTXG00000010973) BBS1 (ENSPTXG00000010881) ENSPTXG00000010872 DPP3 (ENSPTXG00000010869) PELI3 (ENSPTXG00000010866) DRAP1 (ENSPTXG00000010864) C11orf68 (ENSPTXG00000010863) RELA (ENSPTXG00000010343) KAT5 (ENSPTXG00000010339) ENSPTXG00000010338 AP5B1 (ENSPTXG00000010337) ENSPTXG00000010336 ##22 ENSPTXG00000010331 ##22 ENSPTXG00000010225 ##22 ENSPTXG00000010206 ##22 ENSPTXG00000010123 ##22 DPF2 (ENSPTXG00000010121) CDC42EP2 (ENSPTXG00000010120) ENSPTXG00000010119 CAPN1 (ENSPTXG00000010118) SPDYC (ENSPTXG00000010117) SYVN1 (ENSPTXG00000010116) SLAMF8 (ENSPTXG00000010114) CFAP45 (ENSPTXG00000010113) ENSPTXG00000010112 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010091 ENSPTXG00000010089 ENSPTXG00000010088 ENSPTXG00000010087 ENSPTXG00000010086 Mainland tiger snake MODERN SPECIES 708 ENSNSUG00000017271 ##22 ENSNSUG00000017270 ##22 DPF2 (ENSNSUG00000017262) CDC42EP2 (ENSNSUG00000017260) POLA2 (ENSNSUG00000017248) Blue-lipped sea krait MODERN SPECIES 4292 ENSLLTG00000009509 ##22 ENSLLTG00000009064 ##22 ENSLLTG00000008818 ##22 DPF2 (ENSLLTG00000008775) CDC42EP2 (ENSLLTG00000008755) POLA2 (ENSLLTG00000008720) ENSLLTG00000008694 Indian cobra MODERN SPECIES 17 ENSNNAG00000003873 DPP3 (ENSNNAG00000003999) PELI3 (ENSNNAG00000004868) ENSNNAG00000004888 ENSNNAG00000004908 C11orf68 (ENSNNAG00000004981) RELA (ENSNNAG00000004992) ENSNNAG00000005022 ENSNNAG00000005042 AP5B1 (ENSNNAG00000005057) OVOL1 (ENSNNAG00000005073) ENSNNAG00000005118 ##22 ENSNNAG00000005405 ##22 ENSNNAG00000005756 ##22 ENSNNAG00000006165 ##22 ENSNNAG00000006513 ##22 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) ENSNNAG00000007258 ENSNNAG00000007266 ENSNNAG00000007287 ENSNNAG00000007337 Archelosauria ANCESTRAL SPECIES 38 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028 Cryptodira ANCESTRAL SPECIES 17 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853 #18 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b #18 ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028.d Emydidae ANCESTRAL SPECIES 13 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a.i.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.a.a.i.b ##22 ENSGT00940000154901.C.b.f.b.a.a.j ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028.c painted turtle MODERN SPECIES 2386 ENSCPBG00000023531 #18 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) #20 ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 FAU (ENSCPBG00000023637) ZNHIT2 (ENSCPBG00000023638) TM7SF2 (ENSCPBG00000023641) ENSCPBG00000023643 VPS51 (ENSCPBG00000023645) ZFPL1 (ENSCPBG00000023648) CDCA5 (ENSCPBG00000023649) Three-toed box turtle MODERN SPECIES 33 MARK2 (ENSTMTG00000002082) #12 ENSTMTG00000002131 ENSTMTG00000002140 ZFTA (ENSTMTG00000002149) #14 ENSTMTG00000002155 #15 ATL3 (ENSTMTG00000002166) #16 ENSTMTG00000002174 #18 ENSTMTG00000002196 ENSTMTG00000002243 ENSTMTG00000002253 ENSTMTG00000002262 LGALS12 (ENSTMTG00000002278) #20 ENSTMTG00000002287 ##22 ENSTMTG00000002299 ##22 ENSTMTG00000002322 ##22 ENSTMTG00000002391 ##22 CHRM1 (ENSTMTG00000002487) #24 DPF2 (ENSTMTG00000002493) CDC42EP2 (ENSTMTG00000002496) POLA2 (ENSTMTG00000002499) CAPN1 (ENSTMTG00000002515) SPDYC (ENSTMTG00000002540) SYVN1 (ENSTMTG00000002548) ENSTMTG00000002555 MRPL49 (ENSTMTG00000002564) FAU (ENSTMTG00000002567) ZNHIT2 (ENSTMTG00000002573) TM7SF2 (ENSTMTG00000002585) ENSTMTG00000002591 VPS51 (ENSTMTG00000002597) ZFPL1 (ENSTMTG00000002607) Testudinidae ANCESTRAL SPECIES 5 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b #18 ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479.`b ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028.d Abingdon island giant tortoise MODERN SPECIES 2278 ZFTA (ENSCABG00000000736) #14 ENSCABG00000000737 #15 ATL3 (ENSCABG00000000739) #16 ENSCABG00000000740 #18 ENSCABG00000000743 ENSCABG00000000745 ENSCABG00000000747 ENSCABG00000000756 ENSCABG00000000809 LGALS12 (ENSCABG00000000816) #20 ENSCABG00000000918 ENSCABG00000000934 ##22 ENSCABG00000001060 ##22 ENSCABG00000001301 ##22 ENSCABG00000001338 ##22 ENSCABG00000001482 ##22 CHRM1 (ENSCABG00000001601) #24 DPF2 (ENSCABG00000001614) CDC42EP2 (ENSCABG00000001686) POLA2 (ENSCABG00000001701) CAPN1 (ENSCABG00000001957) SPDYC (ENSCABG00000002961) SYVN1 (ENSCABG00000002965) ENSCABG00000002969 MRPL49 (ENSCABG00000002973) FAU (ENSCABG00000002974) ZNHIT2 (ENSCABG00000002976) TM7SF2 (ENSCABG00000002977) Goode s thornscrub tortoise MODERN SPECIES 21 ENSGEVG00005011921 ENSGEVG00005011885 ZFTA (ENSGEVG00005011808) #14 ENSGEVG00005011707 #15 ATL3 (ENSGEVG00005011679) #16 ENSGEVG00005011654 #18 ENSGEVG00005011526 #18 ENSGEVG00005011491 #18 ENSGEVG00005011390 ENSGEVG00005011291 ENSGEVG00005011225 LGALS12 (ENSGEVG00005011151) #20 ENSGEVG00005010707 ##22 ENSGEVG00005010042 ##22 ENSGEVG00005009473 ##22 ENSGEVG00005008720 ##22 CHRM1 (ENSGEVG00005008602) #24 DPF2 (ENSGEVG00005008558) CDC42EP2 (ENSGEVG00005008521) POLA2 (ENSGEVG00005008496) CAPN1 (ENSGEVG00005008420) SPDYC (ENSGEVG00005008396) SYVN1 (ENSGEVG00005008363) ENSGEVG00005008319 MRPL49 (ENSGEVG00005008293) ENSGEVG00005008268 ZNHIT2 (ENSGEVG00005008244) TM7SF2 (ENSGEVG00005008228) ENSGEVG00005008211 VPS51 (ENSGEVG00005008186) ZFPL1 (ENSGEVG00005008161) Chinese turtle MODERN SPECIES 2112 LGALS12 (ENSPSIG00000012610) #20 ENSPSIG00000012542 ##22 ENSPSIG00000012508 ##22 ENSPSIG00000012485 ##22 ENSPSIG00000011590 ##22 ENSPSIG00000011491 ##22 CHRM1 (ENSPSIG00000000656) #24 DPF2 (ENSPSIG00000010805) CDC42EP2 (ENSPSIG00000000649) POLA2 (ENSPSIG00000010575) CAPN1 (ENSPSIG00000008053) SPDYC (ENSPSIG00000007826) SYVN1 (ENSPSIG00000006560) ENSPSIG00000006533 FAU (ENSPSIG00000006273) ZNHIT2 (ENSPSIG00000006244) TM7SF2 (ENSPSIG00000006053) VPS51 (ENSPSIG00000005609) ZFPL1 (ENSPSIG00000005590) CDCA5 (ENSPSIG00000005587) NAALADL1 (ENSPSIG00000015629) Mammalia ANCESTRAL SPECIES 9 ENSGT00390000006979.a #8 ENSGT00390000006255.b #9 ENSGT00940000156048.a.a ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000166766 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853 #18 ENSGT00940000162660.b.e.b ENSGT00940000161499 #20 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539 #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00950000183059.a ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 ENSGT00390000011639 #37 Theria ANCESTRAL SPECIES 8 ENSGT00390000006979.a #8 ENSGT00390000006255.b.b #9 ENSGT00940000156048.a.a ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162660.b.e.b ENSGT00940000161499 #20 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539 #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00950000183059.a ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 ENSGT00390000011639 #37 Marsupialia ANCESTRAL SPECIES 12 ENSGT00390000006255.b.b #9 ENSGT00940000168159 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162660.b.e.b.g.a ENSGT00940000161499 #20 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.g #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00950000183059.a ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 Marsupialia_b ANCESTRAL SPECIES 15 ENSGT00390000006255.b.b #9 ENSGT00940000168159 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162660.b.e.b.g.a ENSGT00940000161499 #20 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.g #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00950000183059.a ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 Diprotodontia ANCESTRAL SPECIES 26 ENSGT00390000006255.b.b #9 ENSGT00940000156048.a.a ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162660.b.e.b.g.a ENSGT00940000161499 #20 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.g #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 ENSGT00390000011639 #37 Diprotodontia_a ANCESTRAL SPECIES 15 ENSGT00940000156048.a.a ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00410000025985 #13 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.d #17 ENSGT00940000162660.b.e.b.g.a ENSGT00940000162660.b.e.a ENSGT00940000161499 #20 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #27 ENSGT00390000007539.g #28 ENSGT00390000012589 #29 ENSGT00510000048151 #30 ENSGT00640000091486.a #31 ENSGT00390000008975 #32 ENSGT00940000161486 #33 ENSGT00940000161805 #34 ENSGT00940000160376 #35 ENSGT01100000263497.B #36 ENSGT00390000011639 #37 Common wonbat MODERN SPECIES 901 SLC22A8 (ENSVURG00010000539) #22 SLC22A6 (ENSVURG00010000773) #23 ENSVURG00010000838 ##22 ENSVURG00010001279 CHRM1 (ENSVURG00010001286) #24 SLC3A2 (ENSVURG00010001296) #25 WDR74 (ENSVURG00010001367) #26 STX5 (ENSVURG00010001407) #27 ENSVURG00010001446 #28 TMEM223 (ENSVURG00010001486) #29 TMEM179B (ENSVURG00010001496) #30 TAF6L (ENSVURG00010001513) #31 POLR2G (ENSVURG00010001531) #32 TTC9C (ENSVURG00010001583) #34 ENSVURG00010001618 GNG3 (ENSVURG00010001979) #36 ENSVURG00010001984 ENSVURG00010001988 koala MODERN SPECIES 179 ENSPCIG00000030061 NAA40 (ENSPCIG00000035706) #10 RCOR2 (ENSPCIG00000015584) #11 MARK2 (ENSPCIG00000015578) #12 SPINDOC (ENSPCIG00000015574) #13 ZFTA (ENSPCIG00000015569) #14 ENSPCIG00000015561 #15 ATL3 (ENSPCIG00000015551) #16 PLAAT3 (ENSPCIG00000031587) #17 ENSPCIG00000015546 ENSPCIG00000015542 LGALS12 (ENSPCIG00000015539) #20 ENSPCIG00000015537 ##23 SLC22A8 (ENSPCIG00000015222) #22 SLC22A6 (ENSPCIG00000015223) #23 ENSPCIG00000017646 ##22 ENSPCIG00000017645 CHRM1 (ENSPCIG00000017643) #24 SLC3A2 (ENSPCIG00000018245) #25 WDR74 (ENSPCIG00000018719) #26 STX5 (ENSPCIG00000018721) #27 ENSPCIG00000015226 #28 TMEM223 (ENSPCIG00000015231) #29 TMEM179B (ENSPCIG00000015233) #30 TAF6L (ENSPCIG00000015237) #31 ENSPCIG00000036190 POLR2G (ENSPCIG00000015245) #32 ZBTB3 (ENSPCIG00000015249) #33 TTC9C (ENSPCIG00000015251) #34 HNRNPUL2 (ENSPCIG00000015254) #35 GNG3 (ENSPCIG00000015258) #36 Tasmanian devil MODERN SPECIES 5 NAA40 (ENSSHAG00000005153) #10 ENSSHAG00000004812 MARK2 (ENSSHAG00000005716) #12 RCOR2 (ENSSHAG00000020586) #11 SPINDOC (ENSSHAG00000006662) #13 ZFTA (ENSSHAG00000022871) #14 ENSSHAG00000021781 #15 ATL3 (ENSSHAG00000002162) #16 ENSSHAG00000020987 #17 ENSSHAG00000022686 LGALS12 (ENSSHAG00000004703) #20 ENSSHAG00000005173 ##23 ENSSHAG00000032003 SLC22A8 (ENSSHAG00000006603) #22 SLC22A6 (ENSSHAG00000007804) #23 ENSSHAG00000022689 ##22 CHRM1 (ENSSHAG00000021922) #24 ENSSHAG00000022006 SLC3A2 (ENSSHAG00000007209) #25 STX5 (ENSSHAG00000024697) #27 WDR74 (ENSSHAG00000026668) #26 ENSSHAG00000006407 #28 TMEM223 (ENSSHAG00000025382) #29 TMEM179B (ENSSHAG00000006311) #30 TAF6L (ENSSHAG00000031966) #31 POLR2G (ENSSHAG00000006006) #32 ENSSHAG00000005891 ZBTB3 (ENSSHAG00000029780) #33 HNRNPUL2 (ENSSHAG00000005445) #35 GNG3 (ENSSHAG00000031455) #36 UBXN1 (ENSSHAG00000029413) Opossum MODERN SPECIES 4 NAP1L4 (ENSMODG00000007012) ENSMODG00000029435 ENSMODG00000043944 #9 ENSMODG00000041851 ENSMODG00000008826 ENSMODG00000008821 #10 MARK2 (ENSMODG00000008796) #12 SPINDOC (ENSMODG00000025552) #13 ENSMODG00000008519 #15 ENSMODG00000008485 #16 ENSMODG00000037909 ENSMODG00000028381 #20 ENSMODG00000008374 ##23 ENSMODG00000038980 ##23 SLC22A6 (ENSMODG00000008309) #23 SLC22A8 (ENSMODG00000036916) ##22 ENSMODG00000049907 CHRM1 (ENSMODG00000008164) #24 SLC3A2 (ENSMODG00000008156) #25 WDR74 (ENSMODG00000008120) #26 ENSMODG00000008085 #28 TMEM223 (ENSMODG00000008008) #29 TMEM179B (ENSMODG00000008003) #30 TAF6L (ENSMODG00000007998) #31 POLR2G (ENSMODG00000007984) #32 ENSMODG00000045532 ENSMODG00000040142 ENSMODG00000005789 ZBTB3 (ENSMODG00000007952) #33 TTC9C (ENSMODG00000007947) #34 GNG3 (ENSMODG00000007929) #36 Platypus MODERN SPECIES 14 RCOR2 (ENSOANG00000040560) #11 ENSOANG00000046888 OTUB1 (ENSOANG00000013465) #8 ENSOANG00000002564 NAA40 (ENSOANG00000012758) #10 MARK2 (ENSOANG00000036135) #12 ENSOANG00000014021 ENSOANG00000051102 #13 ZFTA (ENSOANG00000002940) #14 ENSOANG00000050498 #15 ATL3 (ENSOANG00000037533) #16 ENSOANG00000042590 ENSOANG00000040471 LGALS12 (ENSOANG00000004064) #20 SLC22A6 (ENSOANG00000008288) #23 ENSOANG00000031587 ##22 SLC3A2 (ENSOANG00000010311) #25 WDR74 (ENSOANG00000037883) #26 STX5 (ENSOANG00000039351) #27 ENSOANG00000040729 #28 TMEM223 (ENSOANG00000043257) #29 TMEM179B (ENSOANG00000006059) #30 TAF6L (ENSOANG00000043190) #31 POLR2G (ENSOANG00000005808) #32 ZBTB3 (ENSOANG00000049050) #33 TTC9C (ENSOANG00000042865) #34 ENSOANG00000040832 #37 GNG3 (ENSOANG00000039522) #36 LRRN4CL (ENSOANG00000001564) UBXN1 (ENSOANG00000001565) ENSOANG00000047873 Amniota ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.b.b ##22 Sauria DUPLICATION Sauria DUPLICATION Sauria ANCESTRAL SPECIES 40 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b Archelosauria ANCESTRAL SPECIES 38 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 Cryptodira ANCESTRAL SPECIES 17 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853 #18 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b #18 ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 Emydidae ANCESTRAL SPECIES 13 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a.i.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.a.a.i.b ##22 ENSGT00940000154901.C.b.f.b.a.a.j ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 painted turtle DUPLICATION painted turtle DUPLICATION painted turtle DUPLICATION painted turtle DUPLICATION painted turtle MODERN SPECIES 1123 ENSCPBG00000018749 ##22 ENSCPBG00000018748 ##22 ENSCPBG00000018746 ##22 ENSCPBG00000018744 ##22 ENSCPBG00000018740 ##22 ENSCPBG00000018738 ##22 painted turtle MODERN SPECIES 2061 ENSCPBG00000004941 ##22 painted turtle MODERN SPECIES 1815 ENSCPBG00000007748 ##22 painted turtle DUPLICATION painted turtle DUPLICATION painted turtle MODERN SPECIES 2386 NAA40 (ENSCPBG00000023507) #10 RCOR2 (ENSCPBG00000023509) #11 MARK2 (ENSCPBG00000023513) #12 ENSCPBG00000023518 ENSCPBG00000023519 ZFTA (ENSCPBG00000023522) #14 ENSCPBG00000023525 #15 ATL3 (ENSCPBG00000023529) #16 ENSCPBG00000023531 #18 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) #20 ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 painted turtle MODERN SPECIES 1828 ENSCPBG00000009374 ##22 painted turtle MODERN SPECIES 1123 ENSCPBG00000018749 ##22 ENSCPBG00000018748 ##22 ENSCPBG00000018746 ##22 ENSCPBG00000018744 ##22 ENSCPBG00000018740 ##22 ENSCPBG00000018738 ##22 painted turtle DUPLICATION painted turtle DUPLICATION painted turtle DUPLICATION painted turtle DUPLICATION painted turtle DUPLICATION painted turtle DUPLICATION painted turtle MODERN SPECIES 1123 ENSCPBG00000018749 ##22 ENSCPBG00000018748 ##22 ENSCPBG00000018746 ##22 ENSCPBG00000018744 ##22 ENSCPBG00000018740 ##22 ENSCPBG00000018738 ##22 painted turtle MODERN SPECIES 2386 ENSCPBG00000023518 ENSCPBG00000023519 ZFTA (ENSCPBG00000023522) #14 ENSCPBG00000023525 #15 ATL3 (ENSCPBG00000023529) #16 ENSCPBG00000023531 #18 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) #20 ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 FAU (ENSCPBG00000023637) ZNHIT2 (ENSCPBG00000023638) painted turtle MODERN SPECIES 1123 ENSCPBG00000018749 ##22 ENSCPBG00000018748 ##22 ENSCPBG00000018746 ##22 ENSCPBG00000018744 ##22 ENSCPBG00000018740 ##22 ENSCPBG00000018738 ##22 painted turtle MODERN SPECIES 2120 ENSCPBG00000005346 ##22 painted turtle MODERN SPECIES 2386 ZFTA (ENSCPBG00000023522) #14 ENSCPBG00000023525 #15 ATL3 (ENSCPBG00000023529) #16 ENSCPBG00000023531 #18 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) #20 ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 FAU (ENSCPBG00000023637) ZNHIT2 (ENSCPBG00000023638) TM7SF2 (ENSCPBG00000023641) ENSCPBG00000023643 painted turtle MODERN SPECIES 1320 ENSCPBG00000000765 ##22 ENSCPBG00000000637 ##22 painted turtle DUPLICATION painted turtle DUPLICATION painted turtle MODERN SPECIES 1834 ENSCPBG00000009469 ##22 painted turtle MODERN SPECIES 2386 MARK2 (ENSCPBG00000023513) #12 ENSCPBG00000023518 ENSCPBG00000023519 ZFTA (ENSCPBG00000023522) #14 ENSCPBG00000023525 #15 ATL3 (ENSCPBG00000023529) #16 ENSCPBG00000023531 #18 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) #20 ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 FAU (ENSCPBG00000023637) painted turtle DUPLICATION painted turtle MODERN SPECIES 2023 ENSCPBG00000003175 ##22 painted turtle MODERN SPECIES 2386 RCOR2 (ENSCPBG00000023509) #11 MARK2 (ENSCPBG00000023513) #12 ENSCPBG00000023518 ENSCPBG00000023519 ZFTA (ENSCPBG00000023522) #14 ENSCPBG00000023525 #15 ATL3 (ENSCPBG00000023529) #16 ENSCPBG00000023531 #18 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) #20 ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 Testudinidae ANCESTRAL SPECIES 5 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b #18 ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479.`b ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 Abingdon island giant tortoise MODERN SPECIES 2278 MARK2 (ENSCABG00000000715) #12 ENSCABG00000000726 ENSCABG00000000734 ZFTA (ENSCABG00000000736) #14 ENSCABG00000000737 #15 ATL3 (ENSCABG00000000739) #16 ENSCABG00000000740 #18 ENSCABG00000000743 ENSCABG00000000745 ENSCABG00000000747 ENSCABG00000000756 ENSCABG00000000809 LGALS12 (ENSCABG00000000816) #20 ENSCABG00000000918 ENSCABG00000000934 ##22 ENSCABG00000001060 ##22 ENSCABG00000001301 ##22 ENSCABG00000001338 ##22 ENSCABG00000001482 ##22 CHRM1 (ENSCABG00000001601) #24 DPF2 (ENSCABG00000001614) CDC42EP2 (ENSCABG00000001686) POLA2 (ENSCABG00000001701) CAPN1 (ENSCABG00000001957) SPDYC (ENSCABG00000002961) SYVN1 (ENSCABG00000002965) ENSCABG00000002969 MRPL49 (ENSCABG00000002973) FAU (ENSCABG00000002974) ZNHIT2 (ENSCABG00000002976) TM7SF2 (ENSCABG00000002977) Goode s thornscrub tortoise MODERN SPECIES 21 RCOR2 (ENSGEVG00005012299) #11 MARK2 (ENSGEVG00005012049) #12 ENSGEVG00005011921 ENSGEVG00005011885 ZFTA (ENSGEVG00005011808) #14 ENSGEVG00005011707 #15 ATL3 (ENSGEVG00005011679) #16 ENSGEVG00005011654 #18 ENSGEVG00005011526 #18 ENSGEVG00005011491 #18 ENSGEVG00005011390 ENSGEVG00005011291 ENSGEVG00005011225 LGALS12 (ENSGEVG00005011151) #20 ENSGEVG00005010707 ##22 ENSGEVG00005010042 ##22 ENSGEVG00005009473 ##22 ENSGEVG00005008720 ##22 CHRM1 (ENSGEVG00005008602) #24 DPF2 (ENSGEVG00005008558) CDC42EP2 (ENSGEVG00005008521) POLA2 (ENSGEVG00005008496) CAPN1 (ENSGEVG00005008420) SPDYC (ENSGEVG00005008396) SYVN1 (ENSGEVG00005008363) ENSGEVG00005008319 MRPL49 (ENSGEVG00005008293) ENSGEVG00005008268 ZNHIT2 (ENSGEVG00005008244) TM7SF2 (ENSGEVG00005008228) ENSGEVG00005008211 Chinese turtle MODERN SPECIES 2112 LGALS12 (ENSPSIG00000012610) #20 ENSPSIG00000012542 ##22 ENSPSIG00000012508 ##22 ENSPSIG00000012485 ##22 ENSPSIG00000011590 ##22 ENSPSIG00000011491 ##22 CHRM1 (ENSPSIG00000000656) #24 DPF2 (ENSPSIG00000010805) CDC42EP2 (ENSPSIG00000000649) POLA2 (ENSPSIG00000010575) CAPN1 (ENSPSIG00000008053) SPDYC (ENSPSIG00000007826) SYVN1 (ENSPSIG00000006560) ENSPSIG00000006533 FAU (ENSPSIG00000006273) ZNHIT2 (ENSPSIG00000006244) TM7SF2 (ENSPSIG00000006053) VPS51 (ENSPSIG00000005609) ZFPL1 (ENSPSIG00000005590) Archosauria ANCESTRAL SPECIES 76 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000008975 #32 ENSGT00390000007552 ENSGT00940000154902 Aves ANCESTRAL SPECIES 70 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000008975 #32 ENSGT00390000007552 ENSGT00940000154902 Neognathae ANCESTRAL SPECIES 46 ENSGT00940000159375 #7 ENSGT00390000006979.a #8 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00980000200147 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000162343 ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 Galloanserae ANCESTRAL SPECIES 61 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 Anatidae ANCESTRAL SPECIES 122 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000161776 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 Duck MODERN SPECIES 3232 ENSAPLG00000013761 ##22 Pink-footed goose MODERN SPECIES 506 ENSABRG00000011027 ##22 ENSABRG00000011145 ##22 ENSABRG00000011151 ##22 CDC42EP2 (ENSABRG00000000210) CAPN1 (ENSABRG00000000253) SPDYC (ENSABRG00000000377) SYVN1 (ENSABRG00000000386) Neognathae_b ANCESTRAL SPECIES 39 ENSGT00390000012589 #29 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00980000200147 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000006979.a #8 ENSGT00940000159375 #7 ENSGT00940000154911 ENSGT00390000013444.a.b.b ENSGT00390000002731 ENSGT00930000151054 ENSGT00530000063721.B Neognathae_c ANCESTRAL SPECIES 47 ENSGT00960000192922 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479.cb ENSGT00390000015119 #26 Golden eagle MODERN SPECIES 63 ENSACCG00020016957 DRAP1 (ENSACCG00020012253) ENSACCG00020012269 ##22 ENSACCG00020012301 ##22 ENSACCG00020012339 ##22 DPF2 (ENSACCG00020012404) CDC42EP2 (ENSACCG00020012469) POLA2 (ENSACCG00020012493) CAPN1 (ENSACCG00020012546) SPDYC (ENSACCG00020012590) SYVN1 (ENSACCG00020012628) ENSACCG00020012688 Passeriformes ANCESTRAL SPECIES 43 ENSGT00940000160376 #35 ENSGT00390000012589 #29 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #31 ENSGT00390000006979.a #8 ENSGT00940000159375 #7 ENSGT00940000154911 Great tit MODERN SPECIES 424 ENSPMJG00000003271 ##22 ENSPMJG00000003274 ##22 Passeriformes_d ANCESTRAL SPECIES 38 ENSGT00940000160376 #35 ENSGT00390000012589 #29 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #31 ENSGT00390000006979.a #8 ENSGT00940000159375 #7 ENSGT00940000154911 Passeriformes_g ANCESTRAL SPECIES 44 ENSGT00940000160376 #35 ENSGT00390000012589 #29 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #31 ENSGT00390000006979.a #8 ENSGT00940000159375 #7 ENSGT00940000154911 Passeroidea ANCESTRAL SPECIES 54 ENSGT00940000160376 #35 ENSGT00390000012589 #29 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070.c Zebra finch MODERN SPECIES 38 ENSTGUG00000027721 #28 ENSTGUG00000025536 ENSTGUG00000024672 ENSTGUG00000025402 ENSTGUG00000019144 #10 ENSTGUG00000023367 ENSTGUG00000018975 #11 ENSTGUG00000026804 #12 ENSTGUG00000021779 #15 ENSTGUG00000028550 ENSTGUG00000024470 ENSTGUG00000029491 ENSTGUG00000023063 ENSTGUG00000028070 ENSTGUG00000026404 ##22 ENSTGUG00000020056 ##22 ENSTGUG00000022802 ##22 ENSTGUG00000025700 ENSTGUG00000028595 ENSTGUG00000024413 ENSTGUG00000028151 MRPL49 (ENSTGUG00000021342) ENSTGUG00000016038 ENSTGUG00000027373 ENSTGUG00000026586 ENSTGUG00000019970 ENSTGUG00000021341 ENSTGUG00000020752 ENSTGUG00000016898 OTUB1 (ENSTGUG00000025728) #8 ENSTGUG00000019325 #7 Medium ground finch MODERN SPECIES 435 ENSGFOG00000013454 ##22 ENSGFOG00000013435 ##22 DPF2 (ENSGFOG00000013426) CDC42EP2 (ENSGFOG00000013422) POLA2 (ENSGFOG00000013415) CAPN1 (ENSGFOG00000013412) SYVN1 (ENSGFOG00000013408) African ostrich MODERN SPECIES 508 ENSSCUG00000006058 ##22 SLC22A8 (ENSSCUG00000006061) ##22 ENSSCUG00000006066 ENSSCUG00000006068 POLA2 (ENSSCUG00000006069) ENSSCUG00000006073 SPDYC (ENSSCUG00000006075) SYVN1 (ENSSCUG00000006078) Lepidosauria ANCESTRAL SPECIES 87 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00940000163054.b ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 Episquamata ANCESTRAL SPECIES 19 ENSGT00390000015815 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01100000263573.b.b ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b Toxicofera ANCESTRAL SPECIES 28 ENSGT00390000015815 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 Elapidae ANCESTRAL SPECIES 27 ENSGT00390000015815 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Elapidae_a ANCESTRAL SPECIES 43 ENSGT00390000015815 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00940000159437 ENSGT00390000015815 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 Mainland tiger snake MODERN SPECIES 1014 ENSNSUG00000002171 ##22 ENSNSUG00000002165 ##22 Eastern brown snake MODERN SPECIES 85 EFEMP2 (ENSPTXG00000010977) FIBP (ENSPTXG00000010975) ENSPTXG00000010974 FOSL1 (ENSPTXG00000010973) BBS1 (ENSPTXG00000010881) ENSPTXG00000010872 DPP3 (ENSPTXG00000010869) PELI3 (ENSPTXG00000010866) DRAP1 (ENSPTXG00000010864) C11orf68 (ENSPTXG00000010863) RELA (ENSPTXG00000010343) KAT5 (ENSPTXG00000010339) ENSPTXG00000010338 AP5B1 (ENSPTXG00000010337) ENSPTXG00000010336 ##22 ENSPTXG00000010331 ##22 ENSPTXG00000010225 ##22 ENSPTXG00000010206 ##22 ENSPTXG00000010123 ##22 DPF2 (ENSPTXG00000010121) CDC42EP2 (ENSPTXG00000010120) ENSPTXG00000010119 CAPN1 (ENSPTXG00000010118) SPDYC (ENSPTXG00000010117) SYVN1 (ENSPTXG00000010116) SLAMF8 (ENSPTXG00000010114) CFAP45 (ENSPTXG00000010113) ENSPTXG00000010112 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010091 ENSPTXG00000010089 Blue-lipped sea krait MODERN SPECIES 5737 OVOL1 (ENSLLTG00000015715) ENSLLTG00000015730 ##22 ENSLLTG00000015771 ##22 ENSLLTG00000003127 ##22 TAGLN2 (ENSLLTG00000003142) CFAP45 (ENSLLTG00000003162) ENSLLTG00000003175 ENSLLTG00000003185 SLAMF8 (ENSLLTG00000003209) SYVN1 (ENSLLTG00000003234) SPDYC (ENSLLTG00000003290) CAPN1 (ENSLLTG00000003332) ENSLLTG00000003375 Indian cobra MODERN SPECIES 17 CTSW (ENSNNAG00000016157) ENSNNAG00000016168 ENSNNAG00000016176 ENSNNAG00000003873 DPP3 (ENSNNAG00000003999) PELI3 (ENSNNAG00000004868) ENSNNAG00000004888 ENSNNAG00000004908 C11orf68 (ENSNNAG00000004981) RELA (ENSNNAG00000004992) ENSNNAG00000005022 ENSNNAG00000005042 AP5B1 (ENSNNAG00000005057) OVOL1 (ENSNNAG00000005073) ENSNNAG00000005118 ##22 ENSNNAG00000005405 ##22 ENSNNAG00000005756 ##22 ENSNNAG00000006165 ##22 ENSNNAG00000006513 ##22 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) ENSNNAG00000007258 Lizard MODERN SPECIES 1861 ENSACAG00000006309 ENSACAG00000026822 ##22 ENSACAG00000031439 ##22 Laterata ANCESTRAL SPECIES 62 ENSGT00940000160034 ENSGT00550000074954 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00940000154556 ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000163054.b ENSGT00960000189006 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 Common wall lizard MODERN SPECIES 7 BBS1 (ENSPMRG00000015200) ENSPMRG00000015208 ENSPMRG00000015216 FOSL1 (ENSPMRG00000015223) CCDC85B (ENSPMRG00000015226) FIBP (ENSPMRG00000015231) EFEMP2 (ENSPMRG00000015236) MUS81 (ENSPMRG00000015240) ENSPMRG00000015247 ENSPMRG00000015252 CFL1 (ENSPMRG00000015255) CD248 (ENSPMRG00000015263) AP5B1 (ENSPMRG00000015266) OVOL1 (ENSPMRG00000015270) ENSPMRG00000015277 ##22 ENSPMRG00000015281 ##22 ENSPMRG00000015284 ##22 ENSPMRG00000015298 ##22 ENSPMRG00000015308 ##22 CHRM1 (ENSPMRG00000015315) #24 DPF2 (ENSPMRG00000015322) CDC42EP2 (ENSPMRG00000015335) POLA2 (ENSPMRG00000015344) ENSPMRG00000015363 CDCA5 (ENSPMRG00000015393) ZFPL1 (ENSPMRG00000015397) VPS51 (ENSPMRG00000015399) ENSPMRG00000015412 TM7SF2 (ENSPMRG00000015418) ZNHIT2 (ENSPMRG00000015430) FAU (ENSPMRG00000015437) tuatara MODERN SPECIES 1099 ENSSPUG00000000492 ENSSPUG00000000496 ENSSPUG00000000512 ENSSPUG00000000523 ENSSPUG00000000529 ENSSPUG00000000539 ENSSPUG00000000549 ENSSPUG00000000562 SYVN1 (ENSSPUG00000000566) CAPN1 (ENSSPUG00000000579) ENSSPUG00000000587 ENSSPUG00000000600 ENSSPUG00000000606 AP5B1 (ENSSPUG00000000608) ENSSPUG00000000637 ##22 ENSSPUG00000000660 ##22 ENSSPUG00000000702 ##22 ENSSPUG00000000706 ##22 ENSSPUG00000000714 ##22 DPF2 (ENSSPUG00000000759) POLA2 (ENSSPUG00000000790) ENSSPUG00000000842 KAT5 (ENSSPUG00000000847) ENSSPUG00000000958 ENSSPUG00000000963 CRABP2 (ENSSPUG00000000974) ISG20L2 (ENSSPUG00000000985) MRPL24 (ENSSPUG00000001037) HDGF (ENSSPUG00000001042) PRCC (ENSSPUG00000001049) SH2D2A (ENSSPUG00000001057) Sauria ANCESTRAL SPECIES 40 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 Archelosauria ANCESTRAL SPECIES 38 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 Cryptodira ANCESTRAL SPECIES 17 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853 #18 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00940000155031 #12 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b #18 ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 Emydidae ANCESTRAL SPECIES 13 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a.i.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.a.a.i.b ##22 ENSGT00940000154901.C.b.f.b.a.a.j ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 painted turtle MODERN SPECIES 2386 ENSCPBG00000023525 #15 ATL3 (ENSCPBG00000023529) #16 ENSCPBG00000023531 #18 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) #20 ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 FAU (ENSCPBG00000023637) ZNHIT2 (ENSCPBG00000023638) TM7SF2 (ENSCPBG00000023641) ENSCPBG00000023643 VPS51 (ENSCPBG00000023645) Three-toed box turtle MODERN SPECIES 33 NAA40 (ENSTMTG00000002041) #10 RCOR2 (ENSTMTG00000002058) #11 MARK2 (ENSTMTG00000002082) #12 ENSTMTG00000002131 ENSTMTG00000002140 ZFTA (ENSTMTG00000002149) #14 ENSTMTG00000002155 #15 ATL3 (ENSTMTG00000002166) #16 ENSTMTG00000002174 #18 ENSTMTG00000002196 ENSTMTG00000002243 ENSTMTG00000002253 ENSTMTG00000002262 LGALS12 (ENSTMTG00000002278) #20 ENSTMTG00000002287 ##22 ENSTMTG00000002299 ##22 ENSTMTG00000002322 ##22 ENSTMTG00000002391 ##22 CHRM1 (ENSTMTG00000002487) #24 DPF2 (ENSTMTG00000002493) CDC42EP2 (ENSTMTG00000002496) POLA2 (ENSTMTG00000002499) CAPN1 (ENSTMTG00000002515) SPDYC (ENSTMTG00000002540) SYVN1 (ENSTMTG00000002548) ENSTMTG00000002555 MRPL49 (ENSTMTG00000002564) FAU (ENSTMTG00000002567) ZNHIT2 (ENSTMTG00000002573) TM7SF2 (ENSTMTG00000002585) ENSTMTG00000002591 Testudinidae ANCESTRAL SPECIES 5 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b #18 ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479.`b ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 Abingdon island giant tortoise MODERN SPECIES 2278 ENSCABG00000000726 ENSCABG00000000734 ZFTA (ENSCABG00000000736) #14 ENSCABG00000000737 #15 ATL3 (ENSCABG00000000739) #16 ENSCABG00000000740 #18 ENSCABG00000000743 ENSCABG00000000745 ENSCABG00000000747 ENSCABG00000000756 ENSCABG00000000809 LGALS12 (ENSCABG00000000816) #20 ENSCABG00000000918 ENSCABG00000000934 ##22 ENSCABG00000001060 ##22 ENSCABG00000001301 ##22 ENSCABG00000001338 ##22 ENSCABG00000001482 ##22 CHRM1 (ENSCABG00000001601) #24 DPF2 (ENSCABG00000001614) CDC42EP2 (ENSCABG00000001686) POLA2 (ENSCABG00000001701) CAPN1 (ENSCABG00000001957) SPDYC (ENSCABG00000002961) SYVN1 (ENSCABG00000002965) ENSCABG00000002969 MRPL49 (ENSCABG00000002973) FAU (ENSCABG00000002974) ZNHIT2 (ENSCABG00000002976) TM7SF2 (ENSCABG00000002977) Archosauria ANCESTRAL SPECIES 76 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000008975 #32 ENSGT00390000007552 ENSGT00940000154902 Aves ANCESTRAL SPECIES 70 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000008975 #32 ENSGT00390000007552 ENSGT00940000154902 Neognathae ANCESTRAL SPECIES 46 ENSGT00390000006979.a #8 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00980000200147 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000162343 ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 Galloanserae ANCESTRAL SPECIES 61 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 Phasianidae ANCESTRAL SPECIES 74 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 Phasianidae_b ANCESTRAL SPECIES 80 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 Chicken MODERN SPECIES 63 ENSGALG00010000144 ENSGALG00010000142 ##22 ENSGALG00010000178 ENSGALG00010000175 ##22 DPF2 (ENSGALG00010000171) CDC42EP2 (ENSGALG00010000161) B3GAT3 (ENSGALG00010000150) ENSGALG00010000149 Anatidae ANCESTRAL SPECIES 122 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000161776 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 Pink-footed goose MODERN SPECIES 506 ENSABRG00000011027 ##22 ENSABRG00000011145 ##22 ENSABRG00000011151 ##22 CDC42EP2 (ENSABRG00000000210) CAPN1 (ENSABRG00000000253) SPDYC (ENSABRG00000000377) SYVN1 (ENSABRG00000000386) Duck MODERN SPECIES 725 ENSAPLG00000020768 ##22 Neognathae_b ANCESTRAL SPECIES 39 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00980000200147 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000006979.a #8 ENSGT00940000159375 #7 ENSGT00940000154911 ENSGT00390000013444.a.b.b ENSGT00390000002731 ENSGT00930000151054 ENSGT00530000063721.B Passeriformes ANCESTRAL SPECIES 43 ENSGT00390000012589 #29 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #31 ENSGT00390000006979.a #8 ENSGT00940000159375 #7 ENSGT00940000154911 Passeriformes_d ANCESTRAL SPECIES 38 ENSGT00390000012589 #29 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #31 ENSGT00390000006979.a #8 ENSGT00940000159375 #7 ENSGT00940000154911 Passeriformes_g ANCESTRAL SPECIES 44 ENSGT00390000012589 #29 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #31 ENSGT00390000006979.a #8 ENSGT00940000159375 #7 ENSGT00940000154911 Passeroidea ANCESTRAL SPECIES 54 ENSGT00390000012589 #29 ENSGT00390000007539 #28 ENSGT01000000214440.C #27 ENSGT00960000189643 ENSGT00390000014903 #10 ENSGT00940000154196.a #11 ENSGT00940000155031 #12 ENSGT00940000157482 #15 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070.c Zebra finch MODERN SPECIES 38 ENSTGUG00000025536 ENSTGUG00000024672 ENSTGUG00000025402 ENSTGUG00000019144 #10 ENSTGUG00000023367 ENSTGUG00000018975 #11 ENSTGUG00000026804 #12 ENSTGUG00000021779 #15 ENSTGUG00000028550 ENSTGUG00000024470 ENSTGUG00000029491 ENSTGUG00000023063 ENSTGUG00000028070 ENSTGUG00000026404 ##22 ENSTGUG00000020056 ##22 ENSTGUG00000022802 ##22 ENSTGUG00000025700 ENSTGUG00000028595 ENSTGUG00000024413 ENSTGUG00000028151 MRPL49 (ENSTGUG00000021342) ENSTGUG00000016038 ENSTGUG00000027373 ENSTGUG00000026586 ENSTGUG00000019970 ENSTGUG00000021341 ENSTGUG00000020752 ENSTGUG00000016898 OTUB1 (ENSTGUG00000025728) #8 ENSTGUG00000019325 #7 STIP1 (ENSTGUG00000027054) Great tit MODERN SPECIES 424 ENSPMJG00000003271 ##22 ENSPMJG00000003274 ##22 Neognathae_c ANCESTRAL SPECIES 47 ENSGT00960000192922 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479.cb ENSGT00390000015119 #26 Golden eagle MODERN SPECIES 63 ENSACCG00020016957 DRAP1 (ENSACCG00020012253) ENSACCG00020012269 ##22 ENSACCG00020012301 ##22 ENSACCG00020012339 ##22 DPF2 (ENSACCG00020012404) CDC42EP2 (ENSACCG00020012469) POLA2 (ENSACCG00020012493) CAPN1 (ENSACCG00020012546) SPDYC (ENSACCG00020012590) SYVN1 (ENSACCG00020012628) ENSACCG00020012688 Kakapo MODERN SPECIES 75 PFKFB1 (ENSSHBG00005008286) ENSSHBG00005008296 GNL3L (ENSSHBG00005008311) HUWE1 (ENSSHBG00005009089) NDUFB11 (ENSSHBG00005019046) RBM10 (ENSSHBG00005019052) ENSSHBG00005019288 ENSSHBG00005019289 ENSSHBG00005019291 CDK16 (ENSSHBG00005019294) ENSSHBG00005019295 ENSSHBG00005019297 RELA (ENSSHBG00005019302) DRAP1 (ENSSHBG00005019305) ENSSHBG00005019307 ##22 ENSSHBG00005019310 ##22 ENSSHBG00005019314 DPF2 (ENSSHBG00005019320) CDC42EP2 (ENSSHBG00005019329) POLA2 (ENSSHBG00005019332) CAPN1 (ENSSHBG00005019338) SYVN1 (ENSSHBG00005019344) ENSSHBG00005019348 MRPL49 (ENSSHBG00005019350) FAU (ENSSHBG00005019353) WDR74 (ENSSHBG00005019356) #26 INTS5 (ENSSHBG00005019375) POLR2G (ENSSHBG00005019378) #32 EEF1G (ENSSHBG00005019380) AHNAK (ENSSHBG00005019382) B4GAT1 (ENSSHBG00005019385) Lepidosauria ANCESTRAL SPECIES 87 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00940000163054.b ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 Episquamata ANCESTRAL SPECIES 19 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01100000263573.b.b ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 Laterata ANCESTRAL SPECIES 62 ENSGT00550000074954 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00940000154556 ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000163054.b ENSGT00960000189006 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 Common wall lizard MODERN SPECIES 7 ENSPMRG00000015208 ENSPMRG00000015216 FOSL1 (ENSPMRG00000015223) CCDC85B (ENSPMRG00000015226) FIBP (ENSPMRG00000015231) EFEMP2 (ENSPMRG00000015236) MUS81 (ENSPMRG00000015240) ENSPMRG00000015247 ENSPMRG00000015252 CFL1 (ENSPMRG00000015255) CD248 (ENSPMRG00000015263) AP5B1 (ENSPMRG00000015266) OVOL1 (ENSPMRG00000015270) ENSPMRG00000015277 ##22 ENSPMRG00000015281 ##22 ENSPMRG00000015284 ##22 ENSPMRG00000015298 ##22 ENSPMRG00000015308 ##22 CHRM1 (ENSPMRG00000015315) #24 DPF2 (ENSPMRG00000015322) CDC42EP2 (ENSPMRG00000015335) POLA2 (ENSPMRG00000015344) ENSPMRG00000015363 CDCA5 (ENSPMRG00000015393) ZFPL1 (ENSPMRG00000015397) VPS51 (ENSPMRG00000015399) ENSPMRG00000015412 TM7SF2 (ENSPMRG00000015418) ZNHIT2 (ENSPMRG00000015430) FAU (ENSPMRG00000015437) ENSPMRG00000015443 Argentine black and white tegu MODERN SPECIES 80 FOSL1 (ENSSMRG00000020375) ENSSMRG00000020374 ENSSMRG00000020372 BBS1 (ENSSMRG00000020371) DPP3 (ENSSMRG00000020370) PELI3 (ENSSMRG00000020369) ENSSMRG00000020368 DRAP1 (ENSSMRG00000020367) C11orf68 (ENSSMRG00000020366) ENSSMRG00000020365 RELA (ENSSMRG00000020364) ENSSMRG00000020363 AP5B1 (ENSSMRG00000020362) OVOL1 (ENSSMRG00000020361) ENSSMRG00000020360 ##22 ENSSMRG00000020359 ##22 ENSSMRG00000020358 ##22 ENSSMRG00000020357 ##22 CHRM1 (ENSSMRG00000020355) #24 DPF2 (ENSSMRG00000020354) POLA2 (ENSSMRG00000020352) RBM14 (ENSSMRG00000020351) CCS (ENSSMRG00000020350) ENSSMRG00000020349 ENSSMRG00000020348 SPTBN2 (ENSSMRG00000020347) ENSSMRG00000020346 RCE1 (ENSSMRG00000020343) ACTN3 (ENSSMRG00000020342) ENSSMRG00000020340 SF3B2 (ENSSMRG00000020336) Toxicofera ANCESTRAL SPECIES 28 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Elapidae ANCESTRAL SPECIES 27 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 Elapidae_a DUPLICATION Elapidae_a ANCESTRAL SPECIES 43 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00390000015815 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b Eastern brown snake MODERN SPECIES 85 FIBP (ENSPTXG00000010975) ENSPTXG00000010974 FOSL1 (ENSPTXG00000010973) BBS1 (ENSPTXG00000010881) ENSPTXG00000010872 DPP3 (ENSPTXG00000010869) PELI3 (ENSPTXG00000010866) DRAP1 (ENSPTXG00000010864) C11orf68 (ENSPTXG00000010863) RELA (ENSPTXG00000010343) KAT5 (ENSPTXG00000010339) ENSPTXG00000010338 AP5B1 (ENSPTXG00000010337) ENSPTXG00000010336 ##22 ENSPTXG00000010331 ##22 ENSPTXG00000010225 ##22 ENSPTXG00000010206 ##22 ENSPTXG00000010123 ##22 DPF2 (ENSPTXG00000010121) CDC42EP2 (ENSPTXG00000010120) ENSPTXG00000010119 CAPN1 (ENSPTXG00000010118) SPDYC (ENSPTXG00000010117) SYVN1 (ENSPTXG00000010116) SLAMF8 (ENSPTXG00000010114) CFAP45 (ENSPTXG00000010113) ENSPTXG00000010112 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010091 ENSPTXG00000010089 ENSPTXG00000010088 Blue-lipped sea krait MODERN SPECIES 5737 OVOL1 (ENSLLTG00000015715) ENSLLTG00000015730 ##22 ENSLLTG00000015771 ##22 ENSLLTG00000003127 ##22 TAGLN2 (ENSLLTG00000003142) CFAP45 (ENSLLTG00000003162) ENSLLTG00000003175 ENSLLTG00000003185 SLAMF8 (ENSLLTG00000003209) SYVN1 (ENSLLTG00000003234) SPDYC (ENSLLTG00000003290) CAPN1 (ENSLLTG00000003332) ENSLLTG00000003375 Elapidae_a ANCESTRAL SPECIES 43 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.b.b.a.b.b ##22 Mainland tiger snake MODERN SPECIES 1014 ENSNSUG00000002171 ##22 ENSNSUG00000002165 ##22 Blue-lipped sea krait MODERN SPECIES 4292 ENSLLTG00000009509 ##22 ENSLLTG00000009064 ##22 ENSLLTG00000008818 ##22 DPF2 (ENSLLTG00000008775) CDC42EP2 (ENSLLTG00000008755) POLA2 (ENSLLTG00000008720) ENSLLTG00000008694 Indian cobra MODERN SPECIES 17 ENSNNAG00000016168 ENSNNAG00000016176 ENSNNAG00000003873 DPP3 (ENSNNAG00000003999) PELI3 (ENSNNAG00000004868) ENSNNAG00000004888 ENSNNAG00000004908 C11orf68 (ENSNNAG00000004981) RELA (ENSNNAG00000004992) ENSNNAG00000005022 ENSNNAG00000005042 AP5B1 (ENSNNAG00000005057) OVOL1 (ENSNNAG00000005073) ENSNNAG00000005118 ##22 ENSNNAG00000005405 ##22 ENSNNAG00000005756 ##22 ENSNNAG00000006165 ##22 ENSNNAG00000006513 ##22 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) ENSNNAG00000007258 ENSNNAG00000007266 Sauria ANCESTRAL SPECIES 40 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 Lepidosauria ANCESTRAL SPECIES 87 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00940000163054.b ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 Episquamata ANCESTRAL SPECIES 19 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01100000263573.b.b ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 Laterata ANCESTRAL SPECIES 62 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00940000154556 ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000163054.b ENSGT00960000189006 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 Common wall lizard MODERN SPECIES 7 ENSPMRG00000015216 FOSL1 (ENSPMRG00000015223) CCDC85B (ENSPMRG00000015226) FIBP (ENSPMRG00000015231) EFEMP2 (ENSPMRG00000015236) MUS81 (ENSPMRG00000015240) ENSPMRG00000015247 ENSPMRG00000015252 CFL1 (ENSPMRG00000015255) CD248 (ENSPMRG00000015263) AP5B1 (ENSPMRG00000015266) OVOL1 (ENSPMRG00000015270) ENSPMRG00000015277 ##22 ENSPMRG00000015281 ##22 ENSPMRG00000015284 ##22 ENSPMRG00000015298 ##22 ENSPMRG00000015308 ##22 CHRM1 (ENSPMRG00000015315) #24 DPF2 (ENSPMRG00000015322) CDC42EP2 (ENSPMRG00000015335) POLA2 (ENSPMRG00000015344) ENSPMRG00000015363 CDCA5 (ENSPMRG00000015393) ZFPL1 (ENSPMRG00000015397) VPS51 (ENSPMRG00000015399) ENSPMRG00000015412 TM7SF2 (ENSPMRG00000015418) ZNHIT2 (ENSPMRG00000015430) FAU (ENSPMRG00000015437) ENSPMRG00000015443 ENSPMRG00000015451 Argentine black and white tegu MODERN SPECIES 80 ENSSMRG00000020374 ENSSMRG00000020372 BBS1 (ENSSMRG00000020371) DPP3 (ENSSMRG00000020370) PELI3 (ENSSMRG00000020369) ENSSMRG00000020368 DRAP1 (ENSSMRG00000020367) C11orf68 (ENSSMRG00000020366) ENSSMRG00000020365 RELA (ENSSMRG00000020364) ENSSMRG00000020363 AP5B1 (ENSSMRG00000020362) OVOL1 (ENSSMRG00000020361) ENSSMRG00000020360 ##22 ENSSMRG00000020359 ##22 ENSSMRG00000020358 ##22 ENSSMRG00000020357 ##22 CHRM1 (ENSSMRG00000020355) #24 DPF2 (ENSSMRG00000020354) POLA2 (ENSSMRG00000020352) RBM14 (ENSSMRG00000020351) CCS (ENSSMRG00000020350) ENSSMRG00000020349 ENSSMRG00000020348 SPTBN2 (ENSSMRG00000020347) ENSSMRG00000020346 RCE1 (ENSSMRG00000020343) ACTN3 (ENSSMRG00000020342) ENSSMRG00000020340 SF3B2 (ENSSMRG00000020336) GAL3ST3 (ENSSMRG00000020335) Toxicofera ANCESTRAL SPECIES 28 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 Lizard DUPLICATION Lizard MODERN SPECIES 193 ENSACAG00000006380 ##22 ENSACAG00000040271 ##22 Lizard MODERN SPECIES 433 ENSACAG00000042907 ##22 Elapidae ANCESTRAL SPECIES 27 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 Elapidae_a ANCESTRAL SPECIES 43 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a Eastern brown snake MODERN SPECIES 85 ENSPTXG00000010974 FOSL1 (ENSPTXG00000010973) BBS1 (ENSPTXG00000010881) ENSPTXG00000010872 DPP3 (ENSPTXG00000010869) PELI3 (ENSPTXG00000010866) DRAP1 (ENSPTXG00000010864) C11orf68 (ENSPTXG00000010863) RELA (ENSPTXG00000010343) KAT5 (ENSPTXG00000010339) ENSPTXG00000010338 AP5B1 (ENSPTXG00000010337) ENSPTXG00000010336 ##22 ENSPTXG00000010331 ##22 ENSPTXG00000010225 ##22 ENSPTXG00000010206 ##22 ENSPTXG00000010123 ##22 DPF2 (ENSPTXG00000010121) CDC42EP2 (ENSPTXG00000010120) ENSPTXG00000010119 CAPN1 (ENSPTXG00000010118) SPDYC (ENSPTXG00000010117) SYVN1 (ENSPTXG00000010116) SLAMF8 (ENSPTXG00000010114) CFAP45 (ENSPTXG00000010113) ENSPTXG00000010112 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010091 ENSPTXG00000010089 ENSPTXG00000010088 ENSPTXG00000010087 Mainland tiger snake MODERN SPECIES 708 ENSNSUG00000017271 ##22 ENSNSUG00000017270 ##22 DPF2 (ENSNSUG00000017262) CDC42EP2 (ENSNSUG00000017260) POLA2 (ENSNSUG00000017248) Blue-lipped sea krait MODERN SPECIES 4292 ENSLLTG00000009509 ##22 ENSLLTG00000009064 ##22 ENSLLTG00000008818 ##22 DPF2 (ENSLLTG00000008775) CDC42EP2 (ENSLLTG00000008755) POLA2 (ENSLLTG00000008720) ENSLLTG00000008694 Indian cobra MODERN SPECIES 17 ENSNNAG00000016176 ENSNNAG00000003873 DPP3 (ENSNNAG00000003999) PELI3 (ENSNNAG00000004868) ENSNNAG00000004888 ENSNNAG00000004908 C11orf68 (ENSNNAG00000004981) RELA (ENSNNAG00000004992) ENSNNAG00000005022 ENSNNAG00000005042 AP5B1 (ENSNNAG00000005057) OVOL1 (ENSNNAG00000005073) ENSNNAG00000005118 ##22 ENSNNAG00000005405 ##22 ENSNNAG00000005756 ##22 ENSNNAG00000006165 ##22 ENSNNAG00000006513 ##22 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) ENSNNAG00000007258 ENSNNAG00000007266 ENSNNAG00000007287 tuatara MODERN SPECIES 1099 ENSSPUG00000000523 ENSSPUG00000000529 ENSSPUG00000000539 ENSSPUG00000000549 ENSSPUG00000000562 SYVN1 (ENSSPUG00000000566) CAPN1 (ENSSPUG00000000579) ENSSPUG00000000587 ENSSPUG00000000600 ENSSPUG00000000606 AP5B1 (ENSSPUG00000000608) ENSSPUG00000000637 ##22 ENSSPUG00000000660 ##22 ENSSPUG00000000702 ##22 ENSSPUG00000000706 ##22 ENSSPUG00000000714 ##22 DPF2 (ENSSPUG00000000759) POLA2 (ENSSPUG00000000790) ENSSPUG00000000842 KAT5 (ENSSPUG00000000847) ENSSPUG00000000958 ENSSPUG00000000963 CRABP2 (ENSSPUG00000000974) ISG20L2 (ENSSPUG00000000985) MRPL24 (ENSSPUG00000001037) HDGF (ENSSPUG00000001042) PRCC (ENSSPUG00000001049) SH2D2A (ENSSPUG00000001057) ENSSPUG00000001082 NTRK1 (ENSSPUG00000001153) ENSSPUG00000001182 Archelosauria ANCESTRAL SPECIES 38 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 Cryptodira ANCESTRAL SPECIES 17 ENSGT00940000155031 #12 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853 #18 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b #18 ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 Emydidae ANCESTRAL SPECIES 13 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a.i.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.a.a.i.b ##22 ENSGT00940000154901.C.b.f.b.a.a.j ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 painted turtle MODERN SPECIES 2386 ATL3 (ENSCPBG00000023529) #16 ENSCPBG00000023531 #18 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) #20 ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 FAU (ENSCPBG00000023637) ZNHIT2 (ENSCPBG00000023638) TM7SF2 (ENSCPBG00000023641) ENSCPBG00000023643 VPS51 (ENSCPBG00000023645) ZFPL1 (ENSCPBG00000023648) Three-toed box turtle MODERN SPECIES 33 RCOR2 (ENSTMTG00000002058) #11 MARK2 (ENSTMTG00000002082) #12 ENSTMTG00000002131 ENSTMTG00000002140 ZFTA (ENSTMTG00000002149) #14 ENSTMTG00000002155 #15 ATL3 (ENSTMTG00000002166) #16 ENSTMTG00000002174 #18 ENSTMTG00000002196 ENSTMTG00000002243 ENSTMTG00000002253 ENSTMTG00000002262 LGALS12 (ENSTMTG00000002278) #20 ENSTMTG00000002287 ##22 ENSTMTG00000002299 ##22 ENSTMTG00000002322 ##22 ENSTMTG00000002391 ##22 CHRM1 (ENSTMTG00000002487) #24 DPF2 (ENSTMTG00000002493) CDC42EP2 (ENSTMTG00000002496) POLA2 (ENSTMTG00000002499) CAPN1 (ENSTMTG00000002515) SPDYC (ENSTMTG00000002540) SYVN1 (ENSTMTG00000002548) ENSTMTG00000002555 MRPL49 (ENSTMTG00000002564) FAU (ENSTMTG00000002567) ZNHIT2 (ENSTMTG00000002573) TM7SF2 (ENSTMTG00000002585) ENSTMTG00000002591 VPS51 (ENSTMTG00000002597) Testudinidae ANCESTRAL SPECIES 5 ENSGT00940000155031 #12 ENSGT00950000185472 ENSGT00600000084617 #14 ENSGT00940000157482 #15 ENSGT00940000158566 #16 ENSGT00940000154853.a #18 ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b #18 ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 #20 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479.`b ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 Goode s thornscrub tortoise MODERN SPECIES 21 MARK2 (ENSGEVG00005012049) #12 ENSGEVG00005011921 ENSGEVG00005011885 ZFTA (ENSGEVG00005011808) #14 ENSGEVG00005011707 #15 ATL3 (ENSGEVG00005011679) #16 ENSGEVG00005011654 #18 ENSGEVG00005011526 #18 ENSGEVG00005011491 #18 ENSGEVG00005011390 ENSGEVG00005011291 ENSGEVG00005011225 LGALS12 (ENSGEVG00005011151) #20 ENSGEVG00005010707 ##22 ENSGEVG00005010042 ##22 ENSGEVG00005009473 ##22 ENSGEVG00005008720 ##22 CHRM1 (ENSGEVG00005008602) #24 DPF2 (ENSGEVG00005008558) CDC42EP2 (ENSGEVG00005008521) POLA2 (ENSGEVG00005008496) CAPN1 (ENSGEVG00005008420) SPDYC (ENSGEVG00005008396) SYVN1 (ENSGEVG00005008363) ENSGEVG00005008319 MRPL49 (ENSGEVG00005008293) ENSGEVG00005008268 ZNHIT2 (ENSGEVG00005008244) TM7SF2 (ENSGEVG00005008228) ENSGEVG00005008211 VPS51 (ENSGEVG00005008186) Abingdon island giant tortoise MODERN SPECIES 2278 ENSCABG00000000734 ZFTA (ENSCABG00000000736) #14 ENSCABG00000000737 #15 ATL3 (ENSCABG00000000739) #16 ENSCABG00000000740 #18 ENSCABG00000000743 ENSCABG00000000745 ENSCABG00000000747 ENSCABG00000000756 ENSCABG00000000809 LGALS12 (ENSCABG00000000816) #20 ENSCABG00000000918 ENSCABG00000000934 ##22 ENSCABG00000001060 ##22 ENSCABG00000001301 ##22 ENSCABG00000001338 ##22 ENSCABG00000001482 ##22 CHRM1 (ENSCABG00000001601) #24 DPF2 (ENSCABG00000001614) CDC42EP2 (ENSCABG00000001686) POLA2 (ENSCABG00000001701) CAPN1 (ENSCABG00000001957) SPDYC (ENSCABG00000002961) SYVN1 (ENSCABG00000002965) ENSCABG00000002969 MRPL49 (ENSCABG00000002973) FAU (ENSCABG00000002974) ZNHIT2 (ENSCABG00000002976) TM7SF2 (ENSCABG00000002977) Chinese turtle MODERN SPECIES 2112 LGALS12 (ENSPSIG00000012610) #20 ENSPSIG00000012542 ##22 ENSPSIG00000012508 ##22 ENSPSIG00000012485 ##22 ENSPSIG00000011590 ##22 ENSPSIG00000011491 ##22 CHRM1 (ENSPSIG00000000656) #24 DPF2 (ENSPSIG00000010805) CDC42EP2 (ENSPSIG00000000649) POLA2 (ENSPSIG00000010575) CAPN1 (ENSPSIG00000008053) SPDYC (ENSPSIG00000007826) SYVN1 (ENSPSIG00000006560) ENSPSIG00000006533 FAU (ENSPSIG00000006273) ZNHIT2 (ENSPSIG00000006244) TM7SF2 (ENSPSIG00000006053) VPS51 (ENSPSIG00000005609) ZFPL1 (ENSPSIG00000005590) CDCA5 (ENSPSIG00000005587) Anura DUPLICATION Anura ANCESTRAL SPECIES 183 ENSGT00940000166578 ENSGT00940000161002 ENSGT00530000063721.B ENSGT00930000151054 ENSGT01030000234517.G ENSGT00390000009753 ENSGT00390000010028 ENSGT01030000234598.b.b.a ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157436.m ENSGT00390000007971 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.c #22 ENSGT00940000154901.C.b.d #22 ENSGT00620000087966.b ENSGT00940000168352 Frog MODERN SPECIES 4 slc22a8 (ENSXETG00000026214) ##22 ENSXETG00000048026 chrm1 (ENSXETG00000037602) #24 dpf2 (ENSXETG00000041314) taldo1 (ENSXETG00000001671) ENSXETG00000036077 naaladl1 (ENSXETG00000030740) ENSXETG00000045592 snx15 (ENSXETG00000045742) arl2 (ENSXETG00000046568) ENSXETG00000001662 ENSXETG00000036353 majin (ENSXETG00000035747) gpha2 (ENSXETG00000036545) ppp2r5b (ENSXETG00000001650) ENSXETG00000001646 #22 ENSXETG00000035704 #22 atg2a (ENSXETG00000031818) ENSXETG00000001642 ehd1 (ENSXETG00000001638) vps51 (ENSXETG00000001637) spdyc (ENSXETG00000001636) ENSXETG00000001634 cdca5 (ENSXETG00000023094) zfpl1 (ENSXETG00000023095) ENSXETG00000023097 scyl1 (ENSXETG00000023113) ENSXETG00000043543 frmd8 (ENSXETG00000023119) sult1e1 (ENSXETG00000006064) slc25a45 (ENSXETG00000006053) Anura ANCESTRAL SPECIES 183 ENSGT00940000166578 ENSGT00940000161002 ENSGT00530000063721.B ENSGT00930000151054 ENSGT01030000234517.G ENSGT00390000009753 ENSGT00390000010028 ENSGT01030000234598.b.b.a ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157436.m ENSGT00390000007971 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.c #22 ENSGT00940000154901.C.b.d #22 ENSGT00620000087966.b ENSGT00940000168352 Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 1 ENSLLEG00000030511 ENSLLEG00000030503 ENSLLEG00000030496 ENSLLEG00000030494 ENSLLEG00000030486 ENSLLEG00000030471 ENSLLEG00000030462 ENSLLEG00000030455 #22 ENSLLEG00000030446 #22 ENSLLEG00000030422 #22 ATG2A (ENSLLEG00000030367) ENSLLEG00000030351 ENSLLEG00000030347 ENSLLEG00000030341 ENSLLEG00000030330 ENSLLEG00000030324 ENSLLEG00000030317 ENSLLEG00000030309 #20 ENSLLEG00000030300 ENSLLEG00000030287 ENSLLEG00000030281 ##22 ENSLLEG00000030270 ENSLLEG00000030255 ##22 CHRM1 (ENSLLEG00000030251) #24 Leishan spiny toad MODERN SPECIES 1 ENSLLEG00000030511 ENSLLEG00000030503 ENSLLEG00000030496 ENSLLEG00000030494 ENSLLEG00000030486 ENSLLEG00000030471 ENSLLEG00000030462 ENSLLEG00000030455 #22 ENSLLEG00000030446 #22 ENSLLEG00000030422 #22 ATG2A (ENSLLEG00000030367) ENSLLEG00000030351 ENSLLEG00000030347 ENSLLEG00000030341 ENSLLEG00000030330 ENSLLEG00000030324 ENSLLEG00000030317 ENSLLEG00000030309 #20 ENSLLEG00000030300 ENSLLEG00000030287 ENSLLEG00000030281 ##22 ENSLLEG00000030270 ENSLLEG00000030255 ##22 Leishan spiny toad MODERN SPECIES 1 ENSLLEG00000030511 ENSLLEG00000030503 ENSLLEG00000030496 ENSLLEG00000030494 ENSLLEG00000030486 ENSLLEG00000030471 ENSLLEG00000030462 ENSLLEG00000030455 #22 ENSLLEG00000030446 #22 ENSLLEG00000030422 #22 ATG2A (ENSLLEG00000030367) ENSLLEG00000030351 ENSLLEG00000030347 ENSLLEG00000030341 ENSLLEG00000030330 ENSLLEG00000030324 ENSLLEG00000030317 ENSLLEG00000030309 #20 ENSLLEG00000030300 ENSLLEG00000030287 ENSLLEG00000030281 ##22 ENSLLEG00000030270 ENSLLEG00000030255 ##22 CHRM1 (ENSLLEG00000030251) #24 DPF2 (ENSLLEG00000030191) Frog MODERN SPECIES 4 ENSXETG00000048026 chrm1 (ENSXETG00000037602) #24 dpf2 (ENSXETG00000041314) taldo1 (ENSXETG00000001671) ENSXETG00000036077 naaladl1 (ENSXETG00000030740) ENSXETG00000045592 snx15 (ENSXETG00000045742) arl2 (ENSXETG00000046568) ENSXETG00000001662 ENSXETG00000036353 majin (ENSXETG00000035747) gpha2 (ENSXETG00000036545) ppp2r5b (ENSXETG00000001650) ENSXETG00000001646 #22 ENSXETG00000035704 #22 atg2a (ENSXETG00000031818) ENSXETG00000001642 ehd1 (ENSXETG00000001638) vps51 (ENSXETG00000001637) spdyc (ENSXETG00000001636) ENSXETG00000001634 cdca5 (ENSXETG00000023094) zfpl1 (ENSXETG00000023095) ENSXETG00000023097 scyl1 (ENSXETG00000023113) ENSXETG00000043543 frmd8 (ENSXETG00000023119) sult1e1 (ENSXETG00000006064) slc25a45 (ENSXETG00000006053) ENSXETG00000006049 Coelacanth DUPLICATION Coelacanth DUPLICATION Coelacanth MODERN SPECIES 1650 ENSLACG00000022392 zgc:101765 (ENSLACG00000010004) ENSLACG00000009910 ENSLACG00000009547 ctsf (ENSLACG00000008886) PFAS (ENSLACG00000008454) ENSLACG00000007711 MRPL49 (ENSLACG00000007674) FAU (ENSLACG00000007528) ZNHIT2 (ENSLACG00000007472) TM7SF2 (ENSLACG00000007192) VPS51 (ENSLACG00000006788) ZFPL1 (ENSLACG00000006399) CDCA5 (ENSLACG00000006149) SLC25A45 (ENSLACG00000005487) ENSLACG00000004792 #22 ENSLACG00000004265 #22 ARL2 (ENSLACG00000003946) ENSLACG00000002385 Coelacanth MODERN SPECIES 1650 zgc:101765 (ENSLACG00000010004) ENSLACG00000009910 ENSLACG00000009547 ctsf (ENSLACG00000008886) PFAS (ENSLACG00000008454) ENSLACG00000007711 MRPL49 (ENSLACG00000007674) FAU (ENSLACG00000007528) ZNHIT2 (ENSLACG00000007472) TM7SF2 (ENSLACG00000007192) VPS51 (ENSLACG00000006788) ZFPL1 (ENSLACG00000006399) CDCA5 (ENSLACG00000006149) SLC25A45 (ENSLACG00000005487) ENSLACG00000004792 #22 ENSLACG00000004265 #22 ARL2 (ENSLACG00000003946) ENSLACG00000002385 Coelacanth MODERN SPECIES 254 ENSLACG00000018597 PC (ENSLACG00000018580) PYGM (ENSLACG00000018504) SF1 (ENSLACG00000018493) ENSLACG00000018447 ENSLACG00000018439 ENSLACG00000018423 SPTBN2 (ENSLACG00000018388) ENSLACG00000018377 ENSLACG00000018348 SPDYC (ENSLACG00000022183) ENSLACG00000018325 CAPN1 (ENSLACG00000018300) slc22a6l (ENSLACG00000018280) #22 FRMD8 (ENSLACG00000018256) SCYL1 (ENSLACG00000018196) EHD1 (ENSLACG00000018148) CDC42BPG (ENSLACG00000018109) ENSLACG00000018084 ENSLACG00000018045 ATG2A (ENSLACG00000017999) NAALADL1 (ENSLACG00000017978) ENSLACG00000017967 ENSLACG00000017954 ENSLACG00000017951 UBXN1 (ENSLACG00000017940) GPR137 (ENSLACG00000017922) PRDX5 (ENSLACG00000017903) TRMT112 (ENSLACG00000017896) Actinopterygii ANCESTRAL SPECIES 168 ENSGT00390000007539 #28 ENSGT00390000004842 ENSGT00940000161486 #33 ENSGT00390000002731 ENSGT00390000013444.a.b.b ENSGT00940000154911 ENSGT00940000159375 #7 ENSGT00940000161450 ENSGT00940000165073 ENSGT00390000007552 ENSGT00390000008975 #32 ENSGT00950000183059.a ENSGT00940000153986.b.b ENSGT00940000157743 ENSGT00940000159147 ENSGT00940000154901.C.b #22 Neopterygii ANCESTRAL SPECIES 678 ENSGT00940000159147 ENSGT00940000154901.C.b #22 Osteoglossocephalai ANCESTRAL SPECIES 248 ENSGT00940000165455 ENSGT00940000164485.a ENSGT00940000157258 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT01080000257601 ENSGT00940000164430.a.a ENSGT00940000158778 ENSGT00950000183162.a.a.d ENSGT00940000159674 ENSGT00940000157357.e.b ENSGT00940000154108.a.c ENSGT00940000153169.A.b.a ENSGT00390000008582 ENSGT00530000063652.a.b ENSGT00940000165282.a ENSGT00940000159225 ENSGT00390000005922.b ENSGT00990000205617 Osteoglossiformes ANCESTRAL SPECIES 116 ENSGT00940000157857.h ENSGT00390000001803 ENSGT00940000156167.a.c ENSGT00940000155506.f ENSGT00940000164078.a.b.a.a ENSGT00940000155150.b.b ENSGT00390000006178 ENSGT00940000153727.b ENSGT00940000153727.a ENSGT00940000161460 ENSGT00940000165282.b ENSGT00950000182950.A ENSGT00940000164485.a ENSGT00940000157258 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT01080000257601 ENSGT00940000164430.a.a ENSGT00940000158778.e ENSGT00950000183162.a.a.c ENSGT00940000159674.g ENSGT00940000157357.e.a.f ENSGT00940000165110.c ENSGT00940000166356.e ENSGT00530000064262.pc.a ENSGT00940000156931.d ENSGT00940000160483.k.a P. kingsleyae MODERN SPECIES 102 sra1 (ENSPKIG00000019491) ENSPKIG00000019503 ENSPKIG00000019823 cdx1b (ENSPKIG00000020387) CAMK2A (ENSPKIG00000020422) ndufa2 (ENSPKIG00000020504) ik (ENSPKIG00000020532) wdr55 (ENSPKIG00000020607) CDC25C (ENSPKIG00000020657) ENSPKIG00000020695 ENSPKIG00000020708 cdc23 (ENSPKIG00000020734) rbm4.2 (ENSPKIG00000020805) ENSPKIG00000020823 pygma (ENSPKIG00000020850) slc22a6l (ENSPKIG00000020892) #22 ENSPKIG00000020907 otub1a (ENSPKIG00000020919) #8 ENSPKIG00000020929 Asian bonytongue MODERN SPECIES 19 ENSSFOG00015022182 ENSSFOG00015031238 sra1 (ENSSFOG00015026447) ENSSFOG00015022152 ENSSFOG00015022136 cdx1b (ENSSFOG00015033312) CAMK2A (ENSSFOG00015022093) ndufa2 (ENSSFOG00015022082) ik (ENSSFOG00015022060) CDC25C (ENSSFOG00015022040) ENSSFOG00015022030 cdc23 (ENSSFOG00015022009) rbm4.2 (ENSSFOG00015030194) sf1 (ENSSFOG00015021978) pygma (ENSSFOG00015021894) slc22a6l (ENSSFOG00015021874) #22 ENSSFOG00015026442 otub1a (ENSSFOG00015031352) #8 ENSSFOG00015021850 NRG2 (ENSSFOG00015025951) puraa (ENSSFOG00015029820) PSD2 (ENSSFOG00015021796) ENSSFOG00015025909 CXXC5 (ENSSFOG00015028761) ube2d2 (ENSSFOG00015021755) ENSSFOG00015021741 dnajc18 (ENSSFOG00015021720) BRD8 (ENSSFOG00015021698) RASGRP2 (ENSSFOG00015021580) NRXN2 (ENSSFOG00015021521) ENSSFOG00015021551 Clupeocephala ANCESTRAL SPECIES 331 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000160483.k.a ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT01080000257601 ENSGT00940000164430.a.a ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.qc Otomorpha ANCESTRAL SPECIES 181 ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000158605 ENSGT00390000005232 ENSGT00940000159147.b.a ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000154901.C.b #22 ENSGT01080000257601 ENSGT00390000006255 #9 ENSGT00390000006979.a #8 ENSGT00940000164430.a.a ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d.e ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT00940000165206.c ENSGT00940000156901.A.c ENSGT00390000009786 ENSGT00950000182953.C.d Clupeiformes ANCESTRAL SPECIES 115 ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000158605 ENSGT00390000005232 ENSGT00940000159147.b.a ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000160483.k.a ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT01080000257601 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d.e ENSGT00940000154108.a.c ENSGT00940000154445.b ENSGT00940000153169.B ENSGT00940000165110.b ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT00940000165206.c ENSGT00940000156901.A.c ENSGT00390000009786 Atlantic herring MODERN SPECIES 24 tmigd1 (ENSCHAG00000001911) slc47a1 (ENSCHAG00000001782) slc47a2.1 (ENSCHAG00000001304) MED31 (ENSCHAG00000001214) slc13a5a (ENSCHAG00000001061) SERPINF2 (ENSCHAG00000000992) snx12 (ENSCHAG00000000942) rab24 (ENSCHAG00000000878) fgfr4 (ENSCHAG00000027314) znf346 (ENSCHAG00000027225) ENSCHAG00000027183 ENSCHAG00000027172 NRXN2 (ENSCHAG00000027059) RASGRP2 (ENSCHAG00000027041) pygma (ENSCHAG00000026972) slc22a6l (ENSCHAG00000026948) #22 ENSCHAG00000026946 nrg2a (ENSCHAG00000026933) puraa (ENSCHAG00000026931) zgc:100829 (ENSCHAG00000026929) CXXC5 (ENSCHAG00000026926) ube2d2 (ENSCHAG00000026895) ppp3ca (ENSCHAG00000026774) dnajc18 (ENSCHAG00000026757) ENSCHAG00000026755 ENSCHAG00000026753 frem2a (ENSCHAG00000026742) ufm1 (ENSCHAG00000026732) trpc4a (ENSCHAG00000026728) POSTN (ENSCHAG00000026704) SUPT20H (ENSCHAG00000026682) Denticle herring MODERN SPECIES 16 ENSDCDG00000019277 ENSDCDG00000019281 ENSDCDG00000019283 ENSDCDG00000019286 slc29a2 (ENSDCDG00000019293) cfbl (ENSDCDG00000019302) bbs1 (ENSDCDG00000019313) CAPN1 (ENSDCDG00000019473) pacs1a (ENSDCDG00000020795) zgc:165604 (ENSDCDG00000020815) PCNX3 (ENSDCDG00000020831) NRXN2 (ENSDCDG00000021080) ENSDCDG00000025747 RASGRP2 (ENSDCDG00000025752) pygma (ENSDCDG00000025810) slc22a6l (ENSDCDG00000027508) #22 ENSDCDG00000027519 otub1a (ENSDCDG00000027523) #8 ENSDCDG00000027589 nrg2a (ENSDCDG00000027596) puraa (ENSDCDG00000027654) zgc:100829 (ENSDCDG00000027656) CXXC5 (ENSDCDG00000027660) ube2d2 (ENSDCDG00000027667) ppp3ca (ENSDCDG00000027958) dnajc18 (ENSDCDG00000032112) BRD8 (ENSDCDG00000032122) hnrnph1l (ENSDCDG00000032137) hbegfb (ENSDCDG00000032141) pfdn1 (ENSDCDG00000032144) slc23a1 (ENSDCDG00000032178) Otophysi ANCESTRAL SPECIES 73 ENSGT00940000155031.a.b #12 ENSGT00940000166053 ENSGT00940000164878.b ENSGT00940000168756 ENSGT00390000007335 ENSGT00940000165459.a.a.b ENSGT00940000157436.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000158605 ENSGT00390000005232 ENSGT00940000159147.b.a ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000163749.a.b ENSGT01090000260186 ENSGT00940000154901.C.b #22 ENSGT01080000257601 ENSGT00390000006255 #9 ENSGT00390000006979.a #8 ENSGT00940000164430.a.a ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d.e ENSGT00940000154108.a.d.f ENSGT00940000154445.b ENSGT00940000153169.B ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT00940000165206.c Characiphysae ANCESTRAL SPECIES 12 ENSGT00940000166053 ENSGT00940000164878.b ENSGT00940000168756 ENSGT00390000007335 ENSGT00940000165459.a.a.b ENSGT00940000157436.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000158605 ENSGT00390000005232 ENSGT00940000159147.b.a ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000160483.k.a ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT01080000257601 ENSGT00390000006255 #9 ENSGT00390000006979.a #8 ENSGT00940000164430.a.a ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d.e ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT00940000165206.c ENSGT00940000156901.A.c ENSGT00390000009786 ENSGT00950000182953.C.d Channel catfish MODERN SPECIES 9 hif1al2 (ENSIPUG00000021158) dpp3 (ENSIPUG00000021182) ENSIPUG00000021234 ENSIPUG00000021244 rbm14a (ENSIPUG00000021256) slc29a2 (ENSIPUG00000021262) cfbl (ENSIPUG00000021284) BBS1 (ENSIPUG00000021339) CAPN1 (ENSIPUG00000021372) pacs1a (ENSIPUG00000021424) zgc:165604 (ENSIPUG00000021501) PCNX3 (ENSIPUG00000021514) NRXN2 (ENSIPUG00000021541) RASGRP2 (ENSIPUG00000021597) pygma (ENSIPUG00000021648) slc22a6l (ENSIPUG00000021676) #22 rbx1 (ENSIPUG00000021696) ENSIPUG00000021708 otub1a (ENSIPUG00000021718) #8 ENSIPUG00000021751 nrg2 (ENSIPUG00000023409) puraa (ENSIPUG00000023429) zgc:100829 (ENSIPUG00000023435) cxxc5 (ENSIPUG00000023455) ppp3ca (ENSIPUG00000023459) ENSIPUG00000023498 DNAJC18 (ENSIPUG00000024039) hnrnph1l (ENSIPUG00000024047) hbegf (ENSIPUG00000024054) pfdn1 (ENSIPUG00000024056) slc23a1 (ENSIPUG00000024058) Characiphysae_b ANCESTRAL SPECIES 6 ENSGT00940000166053 ENSGT00940000164878.b ENSGT00390000007071 ENSGT00390000007335 ENSGT00940000165459.a.a.b ENSGT00940000157436.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000158605 ENSGT00390000005232 ENSGT00940000159147.b.a ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000160483.k.a ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT01080000257601 ENSGT00390000006255 #9 ENSGT00390000006979.a #8 ENSGT00940000164430.a.a ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d.e ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT00940000165206.c ENSGT00940000156901.A.c ENSGT00390000009786 ENSGT00950000182953.C.d Characoidei ANCESTRAL SPECIES 27 ENSGT00940000168756 ENSGT00390000007335 ENSGT00940000165459.a.a.b ENSGT00940000157436.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000158605 ENSGT00390000005232 ENSGT00940000159147.b.a ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000163749.a.b ENSGT01090000260186 ENSGT00940000155978.a.b ENSGT00940000160483.k.a ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT01080000257601 ENSGT00390000006255 #9 ENSGT00390000006979.a #8 ENSGT00940000164430.a.a ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d.e ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT00940000165206.c ENSGT00940000156901.A.c ENSGT00390000009786 ENSGT00950000182953.C.d Red-bellied piranha MODERN SPECIES 57 ENSPNAG00000002262 rbm14a (ENSPNAG00000012473) actn3a (ENSPNAG00000012529) slc29a2 (ENSPNAG00000012549) ENSPNAG00000012571 ENSPNAG00000002312 bbs1 (ENSPNAG00000012672) CAPN1 (ENSPNAG00000012722) pacs1a (ENSPNAG00000012867) zgc:165604 (ENSPNAG00000012888) PCNX3 (ENSPNAG00000002454) ENSPNAG00000012925 NRXN2 (ENSPNAG00000013065) RASGRP2 (ENSPNAG00000013105) pygma (ENSPNAG00000013175) slc22a6l (ENSPNAG00000013213) #22 ENSPNAG00000002633 otub1a (ENSPNAG00000002646) #8 ENSPNAG00000002655 nrg2a (ENSPNAG00000013267) puraa (ENSPNAG00000013278) zgc:100829 (ENSPNAG00000013316) CXXC5 (ENSPNAG00000013332) ENSPNAG00000013356 ppp3ca (ENSPNAG00000013454) dnajc18 (ENSPNAG00000002764) ENSPNAG00000002777 hnrnph1l (ENSPNAG00000002784) hbegfb (ENSPNAG00000002795) pfdn1 (ENSPNAG00000013519) slc23a1 (ENSPNAG00000013556) Mexicana tetra MODERN SPECIES 5 zgc:162239 (ENSAMXG00000031256) bbs1 (ENSAMXG00000020073) CAPN1 (ENSAMXG00000020094) pacs1a (ENSAMXG00000020099) zgc:165604 (ENSAMXG00000020106) PCNX3 (ENSAMXG00000020129) nrxn2a (ENSAMXG00000037597) ENSAMXG00000034129 NRXN2 (ENSAMXG00000020839) ENSAMXG00000035665 ENSAMXG00000035463 ENSAMXG00000034314 ENSAMXG00000040053 pygma (ENSAMXG00000020186) RASGRP2 (ENSAMXG00000020174) slc22a6l (ENSAMXG00000020208) #22 cox8a (ENSAMXG00000034171) #9 otub1a (ENSAMXG00000020226) #8 ENSAMXG00000029656 nrg2a (ENSAMXG00000020262) puraa (ENSAMXG00000025364) ENSAMXG00000033549 zgc:100829 (ENSAMXG00000043275) CXXC5 (ENSAMXG00000005579) ENSAMXG00000029447 ppp3ca (ENSAMXG00000038129) dnajc18 (ENSAMXG00000033735) ENSAMXG00000005696 hnrnph1l (ENSAMXG00000030703) hbegfb (ENSAMXG00000005722) pfdn1 (ENSAMXG00000042227) Electric eel MODERN SPECIES 428 ENSEEEG00000021657 pygma (ENSEEEG00000021455) slc22a6l (ENSEEEG00000021393) #22 otub1a (ENSEEEG00000021380) #8 ENSEEEG00000021360 nrg2a (ENSEEEG00000021357) puraa (ENSEEEG00000021354) zgc:100829 (ENSEEEG00000021352) ppp3ca (ENSEEEG00000021304) dnajc18 (ENSEEEG00000021293) ENSEEEG00000021282 hnrnph1l (ENSEEEG00000021278) hbegfb (ENSEEEG00000021276) pfdn1 (ENSEEEG00000021271) slc23a1 (ENSEEEG00000020718) ccnjl (ENSEEEG00000020693) fabp6 (ENSEEEG00000020692) PWWP2A (ENSEEEG00000020690) Cyprinoidei ANCESTRAL SPECIES 12 ENSGT00390000007335 ENSGT00940000165459.a.a.b ENSGT00940000157436.b ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000158605.k ENSGT00390000005232 ENSGT00940000159147.b.a ENSGT00390000006734.a ENSGT00950000183209.a.j ENSGT00940000166677 ENSGT00950000183024.a.a.a ENSGT00990000210819 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000163749.a.b ENSGT00940000154901.C.b #22 ENSGT00390000006255 #9 ENSGT00390000006979.a #8 ENSGT00940000164430.a.a ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d.e ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT00940000165206.c ENSGT00940000156901.A.c ENSGT00390000009786 ENSGT00950000182953.C.d ENSGT00940000168499.d Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 469 ENSGT00940000158605.l.a.a ENSGT00940000158605.k.a.b ENSGT00390000005232.q ENSGT00940000159147.b.a.b ENSGT00950000183209.a.j.g.a ENSGT00940000158735.b ENSGT00940000155978.a.b.d ENSGT00940000160483.k.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b.g #22 ENSGT00390000006255.c.b #9 ENSGT00940000154901.C.b.h #22 ENSGT00390000006255.c.a #9 ENSGT00390000006979.a.o.a #8 ENSGT00940000164430.a.a.c ENSGT00940000158778.c.b ENSGT00950000183162.a.a.c.b ENSGT00940000157357.e.a.a ENSGT00940000154108.a.d.e.a ENSGT00940000165110.a.a ENSGT00940000166356.c ENSGT00940000165206.c.c ENSGT00940000156901.A.c.a.a.a Goldfish MODERN SPECIES 40 SPECC1L (ENSCARG00000069095) setb (ENSCARG00000069042) dync2i2 (ENSCARG00000069019) ENSCARG00000069011 ENSCARG00000068976 cfbl (ENSCARG00000068956) ENSCARG00000068946 bbs1 (ENSCARG00000068935) pacs1a (ENSCARG00000068918) ENSCARG00000068905 PCNX3 (ENSCARG00000067908) NRXN2 (ENSCARG00000067363) ENSCARG00000067271 RASGRP2 (ENSCARG00000067249) pygma (ENSCARG00000065756) slc22a6l (ENSCARG00000065590) #22 cox8a (ENSCARG00000065582) #9 otub1a (ENSCARG00000065553) #8 ENSCARG00000065549 puraa (ENSCARG00000065545) nrg2a (ENSCARG00000065411) zgc:100829 (ENSCARG00000065395) CXXC5 (ENSCARG00000065388) ENSCARG00000065381 ppp3ca (ENSCARG00000064795) dnajc18 (ENSCARG00000064699) BRD8 (ENSCARG00000064129) hnrnph1l (ENSCARG00000064002) hbegfb (ENSCARG00000063991) pfdn1 (ENSCARG00000063974) ccnjl (ENSCARG00000063960) Cyprininae_a ANCESTRAL SPECIES 410 ENSGT00940000158605.l.a.a ENSGT00940000158605.k.a.b ENSGT00390000005232.q ENSGT00940000159147.b.a.b ENSGT00950000183209.a.j.g.a ENSGT00940000158735.b ENSGT00940000155978.a.b.d ENSGT00940000160483.k.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b.g #22 ENSGT00390000006255.c.b #9 ENSGT00940000154901.C.b.h #22 ENSGT00390000006255.c.a #9 ENSGT00390000006979.a.o.a #8 ENSGT00940000164430.a.a.c ENSGT00940000158778.c.b ENSGT00950000183162.a.a.c.b ENSGT00940000157357.e.a.a ENSGT00940000154108.a.d.e.a ENSGT00940000165110.a.a ENSGT00940000166356.c ENSGT00940000165206.c.c Common carp reference MODERN SPECIES 38 hif1al2 (ENSCCRG00000012066) dpp3 (ENSCCRG00000017853) ENSCCRG00000072703 rbm14a (ENSCCRG00000010472) actn3a (ENSCCRG00000012217) ENSCCRG00000010112 ENSCCRG00000016320 cfbl (ENSCCRG00000007465) bbs1 (ENSCCRG00000027323) ENSCCRG00000009123 pacs1a (ENSCCRG00000080072) ENSCCRG00000042237 ENSCCRG00000061299 ENSCCRG00000055308 pygma (ENSCCRG00000046978) slc22a6l (ENSCCRG00000014998) #22 otub1a (ENSCCRG00000014902) #8 ENSCCRG00000014878 nrg2a (ENSCCRG00000060948) puraa (ENSCCRG00000069137) zgc:100829 (ENSCCRG00000045032) ppp3ca (ENSCCRG00000062027) dnajc18 (ENSCCRG00000003827) ENSCCRG00000003384 hnrnph1l (ENSCCRG00000003317) hbegfb (ENSCCRG00000063068) pfdn1 (ENSCCRG00000018839) slc23a1 (ENSCCRG00000018803) ccnjl (ENSCCRG00000078212) fabp6 (ENSCCRG00000063317) PWWP2A (ENSCCRG00000062860) Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 587 ENSSGRG00000005785 ENSSGRG00000006120 RASGRP2 (ENSSGRG00000006123) pygma (ENSSGRG00000006358) slc22a6l (ENSSGRG00000014056) #22 cox8a (ENSSGRG00000014059) #9 otub1a (ENSSGRG00000014060) #8 ENSSGRG00000014061 nrg2a (ENSSGRG00000014068) puraa (ENSSGRG00000014195) zgc:100829 (ENSSGRG00000014196) CXXC5 (ENSSGRG00000014197) ppp3ca (ENSSGRG00000014198) hnrnph1l (ENSSGRG00000014464) hbegfb (ENSSGRG00000014466) slc23a1 (ENSSGRG00000014467) ccnjl (ENSSGRG00000014468) fabp6 (ENSSGRG00000014469) PWWP2A (ENSSGRG00000014470) ttc1 (ENSSGRG00000014471) Golden-line barbel MODERN SPECIES 2775 slc22a6l (ENSSGRG00000011868) #22 Cyprininae ANCESTRAL SPECIES 469 ENSGT00940000158605.l.a.a ENSGT00940000158605.k.a.b ENSGT00390000005232.q ENSGT00940000159147.b.a.b ENSGT00950000183209.a.j.g.a ENSGT00940000158735.b ENSGT00940000155978.a.b.d ENSGT00940000160483.k.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b.g #22 ENSGT00390000006255.c.b #9 ENSGT00940000154901.C.b.h #22 ENSGT00390000006255.c.a #9 ENSGT00390000006979.a.o.a #8 ENSGT00940000164430.a.a.c ENSGT00940000158778.c.b ENSGT00950000183162.a.a.c.b ENSGT00940000157357.e.a.a ENSGT00940000154108.a.d.e.a ENSGT00940000165110.a.a ENSGT00940000166356.c ENSGT00940000165206.c.c ENSGT00940000156901.A.c.a.a.a Goldfish MODERN SPECIES 13 sart1 (ENSCARG00000024039) hif1al2 (ENSCARG00000024005) dpp3 (ENSCARG00000023765) ENSCARG00000023727 rbm14a (ENSCARG00000023706) actn3a (ENSCARG00000023606) slc29a2 (ENSCARG00000023488) cfbl (ENSCARG00000022184) bbs1 (ENSCARG00000021472) CAPN1 (ENSCARG00000021333) pacs1a (ENSCARG00000021255) zgc:165604 (ENSCARG00000021236) PCNX3 (ENSCARG00000021087) NRXN2 (ENSCARG00000018498) RASGRP2 (ENSCARG00000018343) slc22a6l (ENSCARG00000018325) #22 cox8a (ENSCARG00000018321) #9 otub1a (ENSCARG00000018294) #8 ENSCARG00000018288 nrg2a (ENSCARG00000018092) puraa (ENSCARG00000018075) zgc:100829 (ENSCARG00000018062) CXXC5 (ENSCARG00000018057) ppp3ca (ENSCARG00000015380) dnajc18 (ENSCARG00000015276) hnrnph1l (ENSCARG00000015261) hbegfb (ENSCARG00000015251) pfdn1 (ENSCARG00000015242) slc23a1 (ENSCARG00000014471) ccnjl (ENSCARG00000014427) fabp6 (ENSCARG00000014416) Cyprininae_a ANCESTRAL SPECIES 410 ENSGT00940000158605.l.a.a ENSGT00940000158605.k.a.b ENSGT00390000005232.q ENSGT00940000159147.b.a.b ENSGT00950000183209.a.j.g.a ENSGT00940000158735.b ENSGT00940000155978.a.b.d ENSGT00940000160483.k.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b.g #22 ENSGT00390000006255.c.b #9 ENSGT00940000154901.C.b.h #22 ENSGT00390000006255.c.a #9 ENSGT00390000006979.a.o.a #8 ENSGT00940000164430.a.a.c ENSGT00940000158778.c.b ENSGT00950000183162.a.a.c.b ENSGT00940000157357.e.a.a ENSGT00940000154108.a.d.e.a ENSGT00940000165110.a.a ENSGT00940000166356.c ENSGT00940000165206.c.c Common carp reference MODERN SPECIES 45 dpp3 (ENSCCRG00000010502) ENSCCRG00000010474 rbm14a (ENSCCRG00000058774) actn3a (ENSCCRG00000010221) cfbl (ENSCCRG00000007407) slc29a2 (ENSCCRG00000010097) bbs1 (ENSCCRG00000007509) ENSCCRG00000027296 pacs1a (ENSCCRG00000039971) ENSCCRG00000048532 zgc:165604 (ENSCCRG00000048490) ENSCCRG00000059802 ENSCCRG00000046431 ENSCCRG00000039456 ENSCCRG00000068374 slc22a6l (ENSCCRG00000028957) #22 cox8a (ENSCCRG00000028969) #9 otub1a (ENSCCRG00000028976) #8 ENSCCRG00000058143 nrg2a (ENSCCRG00000070403) ENSCCRG00000067626 ENSCCRG00000057868 puraa (ENSCCRG00000052971) zgc:100829 (ENSCCRG00000074805) ppp3ca (ENSCCRG00000045206) ENSCCRG00000062009 ENSCCRG00000060132 ENSCCRG00000006969 hnrnph1l (ENSCCRG00000055945) slc23a1 (ENSCCRG00000003873) fabp6 (ENSCCRG00000018782) Golden-line barbel MODERN SPECIES 736 CAPN1 (ENSSGRG00000037319) pacs1a (ENSSGRG00000037217) zgc:165604 (ENSSGRG00000037216) PCNX3 (ENSSGRG00000037215) ENSSGRG00000036860 ENSSGRG00000036848 pygma (ENSSGRG00000036109) slc22a6l (ENSSGRG00000036085) #22 cox8a (ENSSGRG00000036084) #9 otub1a (ENSSGRG00000036059) #8 ENSSGRG00000036057 nrg2a (ENSSGRG00000036050) ENSSGRG00000036048 Zebrafish MODERN SPECIES 13 ENSDARG00000079095 rbm14a (ENSDARG00000012723) actn3a (ENSDARG00000013755) slc29a2 (ENSDARG00000001767) cfb (ENSDARG00000055278) bfb (ENSDARG00000005616) cfbl (ENSDARG00000090730) bbs1 (ENSDARG00000075169) CAPN1 (ENSDARG00000055338) pacs1a (ENSDARG00000044556) zgc:165604 (ENSDARG00000021241) pcnx3 (ENSDARG00000019501) nrxn2a (ENSDARG00000061454) RASGRP2 (ENSDARG00000062328) pygma (ENSDARG00000055518) slc22a6l (ENSDARG00000055523) #22 cox8a (ENSDARG00000095273) #9 otub1a (ENSDARG00000055536) #8 ENSDARG00000055539 ENSDARG00000117105 nrg2a (ENSDARG00000077818) puraa (ENSDARG00000067591) zgc:100829 (ENSDARG00000015557) CXXC5 (ENSDARG00000078865) ppp3ca (ENSDARG00000004988) ENSDARG00000087457 timd4 (ENSDARG00000077257) havcr1 (ENSDARG00000040178) ENSDARG00000091692 ENSDARG00000103260 ENSDARG00000100964 Euteleosteomorpha ANCESTRAL SPECIES 278 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000160483.k.a ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT01080000257601 ENSGT00940000164430.a.a ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.qc Acanthomorphata ANCESTRAL SPECIES 238 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 Euacanthomorphacea ANCESTRAL SPECIES 20 ENSGT00940000158605 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 5 mia (ENSMMDG00005011573) bicdl2 (ENSMMDG00005011577) TOMM40L (ENSMMDG00005011584) fdxacb1 (ENSMMDG00005011637) alg9 (ENSMMDG00005011669) LAYN (ENSMMDG00005012790) cfbl (ENSMMDG00005012802) ENSMMDG00005012811 ENSMMDG00005012817 dlat (ENSMMDG00005012847) zgc:165604 (ENSMMDG00005013703) PCNX3 (ENSMMDG00005013715) NRXN2 (ENSMMDG00005014586) ENSMMDG00005014595 pygma (ENSMMDG00005014606) slc22a6l (ENSMMDG00005014666) #22 slc22a6l (ENSMMDG00005014926) #22 nrg2a (ENSMMDG00005014955) puraa (ENSMMDG00005014972) zgc:100829 (ENSMMDG00005014974) ENSMMDG00005014976 CXXC5 (ENSMMDG00005014978) ppp3ca (ENSMMDG00005014985) dnajc18 (ENSMMDG00005015234) ENSMMDG00005015240 ENSMMDG00005015246 gng8 (ENSMMDG00005015248) ##36 tmem45b (ENSMMDG00005015253) nfrkb (ENSMMDG00005015261) RYR1 (ENSMMDG00005015292) sms (ENSMMDG00005015336) Pinecone sodierfish MODERN SPECIES 5 bicdl2 (ENSMMDG00005011577) TOMM40L (ENSMMDG00005011584) fdxacb1 (ENSMMDG00005011637) alg9 (ENSMMDG00005011669) LAYN (ENSMMDG00005012790) cfbl (ENSMMDG00005012802) ENSMMDG00005012811 ENSMMDG00005012817 dlat (ENSMMDG00005012847) zgc:165604 (ENSMMDG00005013703) PCNX3 (ENSMMDG00005013715) NRXN2 (ENSMMDG00005014586) ENSMMDG00005014595 pygma (ENSMMDG00005014606) slc22a6l (ENSMMDG00005014666) #22 slc22a6l (ENSMMDG00005014926) #22 nrg2a (ENSMMDG00005014955) puraa (ENSMMDG00005014972) zgc:100829 (ENSMMDG00005014974) ENSMMDG00005014976 CXXC5 (ENSMMDG00005014978) ppp3ca (ENSMMDG00005014985) dnajc18 (ENSMMDG00005015234) ENSMMDG00005015240 ENSMMDG00005015246 gng8 (ENSMMDG00005015248) ##36 tmem45b (ENSMMDG00005015253) nfrkb (ENSMMDG00005015261) RYR1 (ENSMMDG00005015292) sms (ENSMMDG00005015336) ENSMMDG00005015341 Percomorphaceae ANCESTRAL SPECIES 9 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Tiger tail seahorse MODERN SPECIES 214 ENSHCOG00000018824 alg9 (ENSHCOG00000018900) fdxacb1 (ENSHCOG00000018986) TOMM40L (ENSHCOG00000019021) bicdl2 (ENSHCOG00000019031) mia (ENSHCOG00000019036) cryaba (ENSHCOG00000019041) ENSHCOG00000019062 ENSHCOG00000019075 dlat (ENSHCOG00000019129) zgc:165604 (ENSHCOG00000019156) PCNX3 (ENSHCOG00000019327) ENSHCOG00000019351 NRXN2 (ENSHCOG00000019393) pygma (ENSHCOG00000019441) slc22a6l (ENSHCOG00000019476) #22 ENSHCOG00000019495 nrg2a (ENSHCOG00000019891) puraa (ENSHCOG00000019910) zgc:100829 (ENSHCOG00000019923) CXXC5 (ENSHCOG00000019934) ppp3ca (ENSHCOG00000000535) dnajc18 (ENSHCOG00000019970) ENSHCOG00000019982 gng8 (ENSHCOG00000019985) ##36 tmem45b (ENSHCOG00000019990) nfrkb (ENSHCOG00000020060) ENSHCOG00000020276 ENSHCOG00000020291 sms (ENSHCOG00000020312) ENSHCOG00000020322 Percomorphaceae_B ANCESTRAL SPECIES 10 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Percomorphaceae_C ANCESTRAL SPECIES 10 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000177141 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Eupercaria ANCESTRAL SPECIES 17 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000177141 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Tetraodontidae ANCESTRAL SPECIES 6 ENSGT00550000074863 ENSGT00390000016675 ENSGT01100000263475.g.b.i.b.b.a.a ENSGT00940000174850 ENSGT00390000000378.d.a.o.a ENSGT00940000164330 ENSGT00390000017203 ENSGT00940000157434 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000177141 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 Fugu MODERN SPECIES 6 heatr6 (ENSTRUG00000017066) ENSTRUG00000017063 ENSTRUG00000023105 DYNLL2 (ENSTRUG00000026915) ENSTRUG00000017062 ENSTRUG00000017058 pigs (ENSTRUG00000017055) cryaba (ENSTRUG00000017054) DIXDC1 (ENSTRUG00000017048) dlat (ENSTRUG00000017045) zgc:165604 (ENSTRUG00000023665) PCNX3 (ENSTRUG00000017037) ENSTRUG00000029346 NRXN2 (ENSTRUG00000017032) pygma (ENSTRUG00000017024) slc22a6l (ENSTRUG00000017018) #22 nrg2a (ENSTRUG00000017016) puraa (ENSTRUG00000017015) zgc:100829 (ENSTRUG00000028340) CXXC5 (ENSTRUG00000017014) ppp3ca (ENSTRUG00000017009) dnajc18 (ENSTRUG00000020734) tmem45b (ENSTRUG00000016999) nfrkb (ENSTRUG00000016994) sms (ENSTRUG00000016950) ENSTRUG00000025738 gabrr3a (ENSTRUG00000016946) ENSTRUG00000032954 ENSTRUG00000016936 ENSTRUG00000030081 ENSTRUG00000016935 Tetraodon MODERN SPECIES 22 birc2 (ENSTNIG00000009989) ddx52 (ENSTNIG00000009990) heatr6 (ENSTNIG00000009991) ENSTNIG00000009992 ENSTNIG00000009993 pigs (ENSTNIG00000009994) cryaba (ENSTNIG00000009995) ENSTNIG00000009996 ENSTNIG00000009997 DIXDC1 (ENSTNIG00000009998) dlat (ENSTNIG00000009999) zgc:165604 (ENSTNIG00000000565) PCNX3 (ENSTNIG00000010000) nrxn2a (ENSTNIG00000010001) pygma (ENSTNIG00000010002) slc22a6l (ENSTNIG00000010003) #22 nrg2a (ENSTNIG00000010004) puraa (ENSTNIG00000010005) zgc:100829 (ENSTNIG00000001289) ppp3ca (ENSTNIG00000010006) dnajc18 (ENSTNIG00000010007) gng8 (ENSTNIG00000010008) ##36 tmem45b (ENSTNIG00000010009) nfrkb (ENSTNIG00000010010) ENSTNIG00000010011 ENSTNIG00000000719 sms (ENSTNIG00000010012) ENSTNIG00000010013 gabrr3a (ENSTNIG00000010014) ENSTNIG00000000833 ENSTNIG00000010015 Eupecaria_A ANCESTRAL SPECIES 17 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000177141 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Ballan wrasse MODERN SPECIES 56 DIXDC1 (ENSLBEG00000005295) dlat (ENSLBEG00000005229) zgc:165604 (ENSLBEG00000005205) PCNX3 (ENSLBEG00000005127) ENSLBEG00000005079 NRXN2 (ENSLBEG00000005003) pygma (ENSLBEG00000004920) slc22a6l (ENSLBEG00000004881) #22 nrg2a (ENSLBEG00000004849) puraa (ENSLBEG00000004827) zgc:100829 (ENSLBEG00000004807) CXXC5 (ENSLBEG00000004788) ppp3ca (ENSLBEG00000004713) dnajc18 (ENSLBEG00000004648) ENSLBEG00000004623 gng8 (ENSLBEG00000004601) ##36 tmem45b (ENSLBEG00000004566) nfrkb (ENSLBEG00000004532) ENSLBEG00000004460 sms (ENSLBEG00000004400) ENSLBEG00000004370 gabrr3a (ENSLBEG00000004339) ENSLBEG00000004300 Eupecaria_B ANCESTRAL SPECIES 17 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000177141 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Perciformes ANCESTRAL SPECIES 22 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000177141 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00390000006852.A ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Cottioidei ANCESTRAL SPECIES 10 ENSGT00940000159682 ENSGT00940000165141.b ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00390000006852.A ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Lumpfish MODERN SPECIES 5 alg9 (ENSCLMG00005001814) fdxacb1 (ENSCLMG00005001785) TOMM40L (ENSCLMG00005001779) bicdl2 (ENSCLMG00005001770) mia (ENSCLMG00005001768) cryaba (ENSCLMG00005001765) DIXDC1 (ENSCLMG00005001761) dlat (ENSCLMG00005001427) zgc:165604 (ENSCLMG00005016348) PCNX3 (ENSCLMG00005016176) nrxn2a (ENSCLMG00005016169) ENSCLMG00005016168 NRXN2 (ENSCLMG00005016167) ENSCLMG00005016165 pygma (ENSCLMG00005015956) slc22a6l (ENSCLMG00005015949) #22 nrg2a (ENSCLMG00005015946) puraa (ENSCLMG00005015945) zgc:100829 (ENSCLMG00005015944) CXXC5 (ENSCLMG00005015943) ppp3ca (ENSCLMG00005015942) dnajc18 (ENSCLMG00005015941) gng8 (ENSCLMG00005015940) ##36 tmem45b (ENSCLMG00005015939) nfrkb (ENSCLMG00005015781) ENSCLMG00005015767 sms (ENSCLMG00005015760) ENSCLMG00005015745 gabrr3a (ENSCLMG00005015742) ENSCLMG00005015740 ENSCLMG00005015739 Stickleback MODERN SPECIES 7 alg9 (ENSGACG00000020638) fdxacb1 (ENSGACG00000020639) TOMM40L (ENSGACG00000020640) bicdl2 (ENSGACG00000020641) mia (ENSGACG00000020642) ENSGACG00000020643 ENSGACG00000020644 ENSGACG00000020645 ENSGACG00000020646 dlat (ENSGACG00000020647) ENSGACG00000020648 zgc:165604 (ENSGACG00000020649) PCNX3 (ENSGACG00000020650) NRXN2 (ENSGACG00000020651) pygma (ENSGACG00000020652) slc22a6l (ENSGACG00000020653) #22 nrg2a (ENSGACG00000020654) puraa (ENSGACG00000020655) zgc:100829 (ENSGACG00000020656) CXXC5 (ENSGACG00000020657) ppp3ca (ENSGACG00000020658) dnajc18 (ENSGACG00000020659) ENSGACG00000020660 tmem45b (ENSGACG00000020661) nfrkb (ENSGACG00000020662) RYR1 (ENSGACG00000020663) ENSGACG00000020664 sms (ENSGACG00000020665) ENSGACG00000020666 gabrr3a (ENSGACG00000020667) ENSGACG00000020668 Perciformes_a ANCESTRAL SPECIES 20 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b Channel bull blenny MODERN SPECIES 5 atf5a (ENSCGOG00000018920) ENSCGOG00000018911 h2ax (ENSCGOG00000018899) c2cd2l (ENSCGOG00000018897) dpagt1 (ENSCGOG00000018892) hinfp (ENSCGOG00000018885) ENSCGOG00000018881 ABCG4 (ENSCGOG00000018325) kat5b (ENSCGOG00000018237) SIPA1 (ENSCGOG00000018210) ENSCGOG00000018205 PCNX3 (ENSCGOG00000017714) ENSCGOG00000017702 NRXN2 (ENSCGOG00000015142) pygma (ENSCGOG00000008526) slc22a6l (ENSCGOG00000008361) #22 nrg2a (ENSCGOG00000008257) zgc:100829 (ENSCGOG00000008243) ENSCGOG00000008235 CXXC5 (ENSCGOG00000008230) ppp3ca (ENSCGOG00000004623) dnajc18 (ENSCGOG00000004446) BRD8 (ENSCGOG00000003647) gng8 (ENSCGOG00000003623) ##36 tmem45b (ENSCGOG00000003621) nfrkb (ENSCGOG00000003392) ENSCGOG00000003381 sms (ENSCGOG00000003324) ENSCGOG00000003312 gabrr3a (ENSCGOG00000003311) ENSCGOG00000003309 Pike perch MODERN SPECIES 37 alg9 (ENSSLUG00000010777) fdxacb1 (ENSSLUG00000010765) TOMM40L (ENSSLUG00000010732) bicdl2 (ENSSLUG00000010719) mia (ENSSLUG00000010709) CRYAB (ENSSLUG00000010703) ENSSLUG00000010693 ENSSLUG00000010685 DIXDC1 (ENSSLUG00000010673) dlat (ENSSLUG00000010371) zgc:165604 (ENSSLUG00000010352) PCNX3 (ENSSLUG00000010106) ENSSLUG00000010050 NRXN2 (ENSSLUG00000009489) pygma (ENSSLUG00000009089) slc22a6l (ENSSLUG00000008998) #22 nrg2a (ENSSLUG00000008791) puraa (ENSSLUG00000008766) zgc:100829 (ENSSLUG00000008759) CXXC5 (ENSSLUG00000008753) ppp3ca (ENSSLUG00000006024) dnajc18 (ENSSLUG00000005848) BRD8 (ENSSLUG00000005820) gng8 (ENSSLUG00000005804) ##36 tmem45b (ENSSLUG00000005791) nfrkb (ENSSLUG00000005759) ENSSLUG00000005699 sms (ENSSLUG00000005578) ENSSLUG00000005531 gabrr3a (ENSSLUG00000005513) ENSSLUG00000023241 Eupecaria_C ANCESTRAL SPECIES 15 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000177141 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 12 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00940000162446 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000177141 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b European seabass MODERN SPECIES 4 ENSDLAG00005009121 ENSDLAG00005030600 ENSDLAG00005008491 ENSDLAG00005008476 ENSDLAG00005027713 ENSDLAG00005008429 ENSDLAG00005008428 CRYAB (ENSDLAG00005008399) ENSDLAG00005026434 ENSDLAG00005008344 DLAT (ENSDLAG00005028367) ENSDLAG00005007450 ENSDLAG00005007424 ENSDLAG00005005785 pygma (ENSDLAG00005004968) slc22a6l (ENSDLAG00005004873) #22 nrg2a (ENSDLAG00005031051) puraa (ENSDLAG00005027467) zgc:100829 (ENSDLAG00005004212) ENSDLAG00005004205 ppp3ca (ENSDLAG00005029650) ENSDLAG00005027078 gng8 (ENSDLAG00005030629) ##36 ENSDLAG00005011619 nfrkb (ENSDLAG00005011358) ENSDLAG00005006268 ENSDLAG00005006129 ENSDLAG00005006122 ENSDLAG00005028315 ENSDLAG00005006061 ENSDLAG00005006047 Large yellow croaker MODERN SPECIES 493 ENSLCRG00005006600 ENSLCRG00005006620 alg9 (ENSLCRG00005006631) fdxacb1 (ENSLCRG00005006670) TOMM40L (ENSLCRG00005006671) bicdl2 (ENSLCRG00005006675) mia (ENSLCRG00005006678) cryaba (ENSLCRG00005006679) DIXDC1 (ENSLCRG00005006681) dlat (ENSLCRG00005006689) zgc:165604 (ENSLCRG00005006881) PCNX3 (ENSLCRG00005006886) NRXN2 (ENSLCRG00005006913) ENSLCRG00005008179 pygma (ENSLCRG00005008191) slc22a6l (ENSLCRG00005009954) #22 nrg2a (ENSLCRG00005009960) puraa (ENSLCRG00005010406) zgc:100829 (ENSLCRG00005010407) CXXC5 (ENSLCRG00005010409) ppp3ca (ENSLCRG00005010419) dnajc18 (ENSLCRG00005010886) BRD8 (ENSLCRG00005010897) tmem45b (ENSLCRG00005010928) nfrkb (ENSLCRG00005010930) ENSLCRG00005010935 sms (ENSLCRG00005011498) ENSLCRG00005011500 gabrr3a (ENSLCRG00005011505) ENSLCRG00005011508 PHLDB2 (ENSLCRG00005011509) Gilthead seabream MODERN SPECIES 4 ENSSAUG00010010692 alg9 (ENSSAUG00010010219) TOMM40L (ENSSAUG00010010211) fdxacb1 (ENSSAUG00010010208) bicdl2 (ENSSAUG00010010203) mia (ENSSAUG00010010200) cryaba (ENSSAUG00010010198) ENSSAUG00010010197 DIXDC1 (ENSSAUG00010010194) dlat (ENSSAUG00010010019) zgc:165604 (ENSSAUG00010010016) PCNX3 (ENSSAUG00010010007) ENSSAUG00010009993 NRXN2 (ENSSAUG00010009183) pygma (ENSSAUG00010008919) slc22a6l (ENSSAUG00010008873) #22 nrg2a (ENSSAUG00010008855) puraa (ENSSAUG00010008853) zgc:100829 (ENSSAUG00010008850) CXXC5 (ENSSAUG00010008849) ppp3ca (ENSSAUG00010002652) dnajc18 (ENSSAUG00010002534) ENSSAUG00010002476 gng8 (ENSSAUG00010002463) ##36 tmem45b (ENSSAUG00010002461) nfrkb (ENSSAUG00010002458) ENSSAUG00010001986 sms (ENSSAUG00010001980) ENSSAUG00010001976 gabrr3a (ENSSAUG00010001963) ENSSAUG00010001960 Percomorphaceae_D ANCESTRAL SPECIES 16 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000177141 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Anabantaria ANCESTRAL SPECIES 13 ENSGT00940000158605 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000177141 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Zig-zag eel MODERN SPECIES 5 ENSMAMG00000018724 ENSMAMG00000018708 ENSMAMG00000025479 fdxacb1 (ENSMAMG00000018674) ENSMAMG00000018667 ENSMAMG00000018657 ENSMAMG00000018633 CRYAB (ENSMAMG00000018619) ENSMAMG00000018611 DLAT (ENSMAMG00000018583) zgc:165604 (ENSMAMG00000018566) ENSMAMG00000018448 ENSMAMG00000018434 ENSMAMG00000018398 pygma (ENSMAMG00000018334) slc22a6l (ENSMAMG00000018301) #22 nrg2a (ENSMAMG00000018282) puraa (ENSMAMG00000018267) zgc:100829 (ENSMAMG00000018248) ENSMAMG00000018232 ppp3ca (ENSMAMG00000018209) ENSMAMG00000024664 ENSMAMG00000018178 gng8 (ENSMAMG00000018142) ##36 ENSMAMG00000018131 nfrkb (ENSMAMG00000018113) ENSMAMG00000018038 ENSMAMG00000018026 gabrr3a (ENSMAMG00000018005) ENSMAMG00000017989 ENSMAMG00000026403 Anabantoidei ANCESTRAL SPECIES 12 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00940000162446 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000177141 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Climbing perch MODERN SPECIES 5 ENSATEG00000028669 ENSATEG00000020814 ENSATEG00000020777 fdxacb1 (ENSATEG00000020757) ENSATEG00000020740 ENSATEG00000020727 ENSATEG00000020716 ENSATEG00000020708 ENSATEG00000028323 ENSATEG00000020320 zgc:165604 (ENSATEG00000025428) ENSATEG00000020100 ENSATEG00000020065 ENSATEG00000020010 pygma (ENSATEG00000019948) slc22a6l (ENSATEG00000019840) #22 nrg2a (ENSATEG00000019816) puraa (ENSATEG00000019813) zgc:100829 (ENSATEG00000019795) ENSATEG00000019780 ppp3ca (ENSATEG00000019737) ENSATEG00000027485 ENSATEG00000019713 gng8 (ENSATEG00000019698) ##36 ENSATEG00000019685 nfrkb (ENSATEG00000019611) ENSATEG00000019555 ENSATEG00000019523 ENSATEG00000019493 gabrr3a (ENSATEG00000019371) ENSATEG00000019343 Carangaria ANCESTRAL SPECIES 16 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Pleuronectoidei ANCESTRAL SPECIES 23 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Tongue sole MODERN SPECIES 10 zgc:165604 (ENSCSEG00000009876) PCNX3 (ENSCSEG00000009647) ENSCSEG00000009619 ENSCSEG00000009614 ENSCSEG00000009611 ENSCSEG00000009584 pygma (ENSCSEG00000009511) slc22a6l (ENSCSEG00000009492) #22 nrg2a (ENSCSEG00000009409) puraa (ENSCSEG00000009380) zgc:100829 (ENSCSEG00000009367) CXXC5 (ENSCSEG00000009362) ppp3ca (ENSCSEG00000009325) dnajc18 (ENSCSEG00000009304) ENSCSEG00000009298 gng8 (ENSCSEG00000009267) ##36 ENSCSEG00000009251 si:dkey-251i10.3 (ENSCSEG00000009241) nfrkb (ENSCSEG00000009070) tmem45b (ENSCSEG00000009049) ENSCSEG00000009035 ENSCSEG00000009025 sms (ENSCSEG00000008995) Turbot MODERN SPECIES 16 ENSSMAG00000010207 ENSSMAG00000010184 ENSSMAG00000010250 ENSSMAG00000010264 ENSSMAG00000010348 ENSSMAG00000029792 CRYAB (ENSSMAG00000021843) ENSSMAG00000031333 ENSSMAG00000010481 DLAT (ENSSMAG00000010578) zgc:165604 (ENSSMAG00000010658) ENSSMAG00000010691 ENSSMAG00000010982 ENSSMAG00000011208 pygma (ENSSMAG00000011237) slc22a6l (ENSSMAG00000011282) #22 nrg2a (ENSSMAG00000011327) puraa (ENSSMAG00000011590) zgc:100829 (ENSSMAG00000011591) ENSSMAG00000011609 ppp3ca (ENSSMAG00000011621) ENSSMAG00000011706 ENSSMAG00000011723 gng8 (ENSSMAG00000011777) ##36 ENSSMAG00000011787 nfrkb (ENSSMAG00000011807) ENSSMAG00000012089 ENSSMAG00000012095 ENSSMAG00000012121 gabrr3a (ENSSMAG00000012145) ENSSMAG00000012168 Carangaria_A ANCESTRAL SPECIES 8 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Seriola ANCESTRAL SPECIES 2 ENSGT00940000165141.b ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Yellowtail amberjack MODERN SPECIES 3035 ENSSLDG00000017305 ENSSLDG00000017332 alg9 (ENSSLDG00000017352) fdxacb1 (ENSSLDG00000017388) TOMM40L (ENSSLDG00000017396) bicdl2 (ENSSLDG00000017430) cryaba (ENSSLDG00000017555) mia (ENSSLDG00000017635) DIXDC1 (ENSSLDG00000017649) dlat (ENSSLDG00000017681) zgc:165604 (ENSSLDG00000017727) PCNX3 (ENSSLDG00000017779) NRXN2 (ENSSLDG00000018011) ENSSLDG00000018229 pygma (ENSSLDG00000018238) slc22a6l (ENSSLDG00000018286) #22 nrg2a (ENSSLDG00000018318) puraa (ENSSLDG00000018361) zgc:100829 (ENSSLDG00000018371) CXXC5 (ENSSLDG00000018379) ppp3ca (ENSSLDG00000018396) dnajc18 (ENSSLDG00000018427) ENSSLDG00000018444 gng8 (ENSSLDG00000018472) ##36 tmem45b (ENSSLDG00000018515) nfrkb (ENSSLDG00000018567) RYR1 (ENSSLDG00000018638) ENSSLDG00000018814 ENSSLDG00000018831 sms (ENSSLDG00000018844) ENSSLDG00000018877 Greater amberjack MODERN SPECIES 139 ENSSDUG00000004343 ENSSDUG00000004392 alg9 (ENSSDUG00000004403) fdxacb1 (ENSSDUG00000004461) TOMM40L (ENSSDUG00000004481) bicdl2 (ENSSDUG00000004540) mia (ENSSDUG00000004559) cryaba (ENSSDUG00000004570) DIXDC1 (ENSSDUG00000004587) dlat (ENSSDUG00000004751) zgc:165604 (ENSSDUG00000004798) PCNX3 (ENSSDUG00000004829) NRXN2 (ENSSDUG00000004995) ENSSDUG00000005042 pygma (ENSSDUG00000005053) slc22a6l (ENSSDUG00000005131) #22 nrg2a (ENSSDUG00000005225) puraa (ENSSDUG00000005278) zgc:100829 (ENSSDUG00000005287) CXXC5 (ENSSDUG00000005317) ppp3ca (ENSSDUG00000005326) dnajc18 (ENSSDUG00000005351) BRD8 (ENSSDUG00000005363) gng8 (ENSSDUG00000005386) ##36 tmem45b (ENSSDUG00000005454) nfrkb (ENSSDUG00000005511) RYR1 (ENSSDUG00000005595) ENSSDUG00000005839 sms (ENSSDUG00000005853) ENSSDUG00000005896 gabrr3a (ENSSDUG00000005971) Barramundi perch MODERN SPECIES 94 LAYN (ENSLCAG00010009520) alg9 (ENSLCAG00010009483) fdxacb1 (ENSLCAG00010009461) TOMM40L (ENSLCAG00010009448) bicdl2 (ENSLCAG00010009437) mia (ENSLCAG00010009433) cryaba (ENSLCAG00010009429) ENSLCAG00010009420 DIXDC1 (ENSLCAG00010009397) dlat (ENSLCAG00010009379) zgc:165604 (ENSLCAG00010009373) PCNX3 (ENSLCAG00010009334) ENSLCAG00010009309 NRXN2 (ENSLCAG00010009066) pygma (ENSLCAG00010008927) slc22a6l (ENSLCAG00010008868) #22 nrg2a (ENSLCAG00010008834) puraa (ENSLCAG00010008819) zgc:100829 (ENSLCAG00010008818) CXXC5 (ENSLCAG00010008811) ppp3ca (ENSLCAG00010008592) dnajc18 (ENSLCAG00010008535) ENSLCAG00010008523 gng8 (ENSLCAG00010008516) ##36 tmem45b (ENSLCAG00010008514) nfrkb (ENSLCAG00010008508) sms (ENSLCAG00010008016) ENSLCAG00010007994 gabrr3a (ENSLCAG00010007980) ENSLCAG00010007967 ENSLCAG00010007965 Ovalentaria ANCESTRAL SPECIES 11 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Ovalentaria_B ANCESTRAL SPECIES 16 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Pomacentridae ANCESTRAL SPECIES 10 ENSGT00940000165141.b ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Pomacentridae_A ANCESTRAL SPECIES 3 ENSGT00940000165141.b ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Amphiprion ANCESTRAL SPECIES 3 ENSGT00940000165141.b ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b Orange clownfish MODERN SPECIES 6 ENSAPEG00000023812 ENSAPEG00000023829 alg9 (ENSAPEG00000023842) fdxacb1 (ENSAPEG00000023857) TOMM40L (ENSAPEG00000023867) bicdl2 (ENSAPEG00000023880) mia (ENSAPEG00000023895) cryaba (ENSAPEG00000023906) DIXDC1 (ENSAPEG00000023912) dlat (ENSAPEG00000023928) zgc:165604 (ENSAPEG00000023956) PCNX3 (ENSAPEG00000023975) NRXN2 (ENSAPEG00000024071) ENSAPEG00000024087 pygma (ENSAPEG00000024093) slc22a6l (ENSAPEG00000024114) #22 nrg2a (ENSAPEG00000024139) puraa (ENSAPEG00000024208) zgc:100829 (ENSAPEG00000024215) CXXC5 (ENSAPEG00000024231) ppp3ca (ENSAPEG00000024244) dnajc18 (ENSAPEG00000024250) ENSAPEG00000024255 ENSAPEG00000024271 gng8 (ENSAPEG00000024279) ##36 tmem45b (ENSAPEG00000024308) nfrkb (ENSAPEG00000024317) RYR1 (ENSAPEG00000024341) sms (ENSAPEG00000024395) ENSAPEG00000024399 gabrr3a (ENSAPEG00000024405) Clown anemonefish MODERN SPECIES 714 NRXN2 (ENSAOCG00000007649) pygma (ENSAOCG00000007754) slc22a6l (ENSAOCG00000000428) #22 puraa (ENSAOCG00000007783) zgc:100829 (ENSAOCG00000007801) nrg2a (ENSAOCG00000007857) CXXC5 (ENSAOCG00000007880) ppp3ca (ENSAOCG00000007927) dnajc18 (ENSAOCG00000007948) ENSAOCG00000007960 gng8 (ENSAOCG00000008021) ##36 tmem45b (ENSAOCG00000008032) nfrkb (ENSAOCG00000008325) RYR1 (ENSAOCG00000008576) sms (ENSAOCG00000008646) ENSAOCG00000008666 gabrr3a (ENSAOCG00000008683) Spiny chromis MODERN SPECIES 87 alg9 (ENSAPOG00000009114) fdxacb1 (ENSAPOG00000009041) TOMM40L (ENSAPOG00000009029) bicdl2 (ENSAPOG00000009009) mia (ENSAPOG00000008990) cryaba (ENSAPOG00000008978) DIXDC1 (ENSAPOG00000008950) dlat (ENSAPOG00000008912) zgc:165604 (ENSAPOG00000008843) PCNX3 (ENSAPOG00000000739) NRXN2 (ENSAPOG00000008586) ENSAPOG00000008410 pygma (ENSAPOG00000008402) slc22a6l (ENSAPOG00000008331) #22 nrg2a (ENSAPOG00000008304) puraa (ENSAPOG00000008260) zgc:100829 (ENSAPOG00000008243) CXXC5 (ENSAPOG00000008221) ppp3ca (ENSAPOG00000008191) dnajc18 (ENSAPOG00000008124) BRD8 (ENSAPOG00000008109) gng8 (ENSAPOG00000008099) ##36 tmem45b (ENSAPOG00000008084) nfrkb (ENSAPOG00000008071) RYR1 (ENSAPOG00000008048) ENSAPOG00000007683 sms (ENSAPOG00000007654) ENSAPOG00000007573 gabrr3a (ENSAPOG00000007548) Bicolor damselfish MODERN SPECIES 457 ARSD (ENSSPAG00000010446) snx4 (ENSSPAG00000011434) ihha (ENSSPAG00000011483) BIN1 (ENSSPAG00000011496) ENSSPAG00000011523 desma (ENSSPAG00000011543) ptprna (ENSSPAG00000011594) PCNX3 (ENSSPAG00000011674) NRXN2 (ENSSPAG00000011861) ENSSPAG00000011894 pygma (ENSSPAG00000011904) slc22a6l (ENSSPAG00000011959) #22 nrg2a (ENSSPAG00000011991) puraa (ENSSPAG00000012039) zgc:100829 (ENSSPAG00000012046) CXXC5 (ENSSPAG00000012061) Cichlidae ANCESTRAL SPECIES 4 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Pseudocrenilabrinae ANCESTRAL SPECIES 14 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 21 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a.c ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Haplochromini ANCESTRAL SPECIES 8 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a.c ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Haplochromini_A ANCESTRAL SPECIES 6 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a.c ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Haplochromini_B ANCESTRAL SPECIES 26 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a.c ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Zebra mbuna MODERN SPECIES 1092 ENSMZEG00005018823 alg9 (ENSMZEG00005018808) fdxacb1 (ENSMZEG00005018799) TOMM40L (ENSMZEG00005018793) bicdl2 (ENSMZEG00005018762) mia (ENSMZEG00005018754) cryaba (ENSMZEG00005018752) ENSMZEG00005018749 DIXDC1 (ENSMZEG00005018735) dlat (ENSMZEG00005018723) zgc:165604 (ENSMZEG00005018718) PCNX3 (ENSMZEG00005018678) ENSMZEG00005018665 NRXN2 (ENSMZEG00005018630) pygma (ENSMZEG00005018609) slc22a6l (ENSMZEG00005018595) #22 nrg2a (ENSMZEG00005018590) puraa (ENSMZEG00005018587) zgc:100829 (ENSMZEG00005018581) ENSMZEG00005018576 CXXC5 (ENSMZEG00005018572) ppp3ca (ENSMZEG00005018561) dnajc18 (ENSMZEG00005018557) ENSMZEG00005018551 gng8 (ENSMZEG00005018548) ##36 tmem45b (ENSMZEG00005018543) nfrkb (ENSMZEG00005018535) ENSMZEG00005018528 ENSMZEG00005018524 ENSMZEG00005018520 sms (ENSMZEG00005018510) Eastern happy MODERN SPECIES 1 alg9 (ENSACLG00000020512) fdxacb1 (ENSACLG00000020497) TOMM40L (ENSACLG00000020472) cryaba (ENSACLG00000020461) bicdl2 (ENSACLG00000020351) mia (ENSACLG00000020336) ENSACLG00000020309 cryaba (ENSACLG00000020295) DIXDC1 (ENSACLG00000020271) dlat (ENSACLG00000020195) zgc:165604 (ENSACLG00000020162) PCNX3 (ENSACLG00000020087) ENSACLG00000020068 NRXN2 (ENSACLG00000019751) pygma (ENSACLG00000019569) slc22a6l (ENSACLG00000019512) #22 ENSACLG00000019496 nrg2a (ENSACLG00000019475) puraa (ENSACLG00000019437) zgc:100829 (ENSACLG00000019428) ENSACLG00000019417 CXXC5 (ENSACLG00000019404) ppp3ca (ENSACLG00000019333) dnajc18 (ENSACLG00000019300) ENSACLG00000019284 gng8 (ENSACLG00000019272) ##36 tmem45b (ENSACLG00000019226) nfrkb (ENSACLG00000019188) ENSACLG00000019178 ENSACLG00000019160 ENSACLG00000019149 P. nyererei MODERN SPECIES 359 alg9 (ENSPNYG00000012932) fdxacb1 (ENSPNYG00000012981) TOMM40L (ENSPNYG00000012995) bicdl2 (ENSPNYG00000013041) mia (ENSPNYG00000013114) cryaba (ENSPNYG00000013121) ENSPNYG00000013134 DIXDC1 (ENSPNYG00000013144) dlat (ENSPNYG00000013190) zgc:165604 (ENSPNYG00000013222) PCNX3 (ENSPNYG00000013254) NRXN2 (ENSPNYG00000013318) ENSPNYG00000013354 pygma (ENSPNYG00000013384) slc22a6l (ENSPNYG00000013491) #22 nrg2a (ENSPNYG00000013643) puraa (ENSPNYG00000013832) zgc:100829 (ENSPNYG00000013845) CXXC5 (ENSPNYG00000013859) ppp3ca (ENSPNYG00000013871) dnajc18 (ENSPNYG00000013905) ENSPNYG00000013953 ENSPNYG00000013963 gng8 (ENSPNYG00000013975) ##36 tmem45b (ENSPNYG00000013985) nfrkb (ENSPNYG00000014015) ENSPNYG00000014084 ENSPNYG00000014104 ENSPNYG00000014123 sms (ENSPNYG00000014145) Burton s mouthbrooder MODERN SPECIES 582 alg9 (ENSHBUG00000003474) fdxacb1 (ENSHBUG00000003489) ENSHBUG00000003502 bicdl2 (ENSHBUG00000003511) mia (ENSHBUG00000003535) cryaba (ENSHBUG00000000080) ENSHBUG00000003563 DIXDC1 (ENSHBUG00000000980) dlat (ENSHBUG00000003626) zgc:165604 (ENSHBUG00000003655) PCNX3 (ENSHBUG00000003768) ENSHBUG00000003775 NRXN2 (ENSHBUG00000003998) pygma (ENSHBUG00000004114) slc22a6l (ENSHBUG00000004138) #22 nrg2a (ENSHBUG00000004528) puraa (ENSHBUG00000001122) zgc:100829 (ENSHBUG00000004599) CXXC5 (ENSHBUG00000004612) ppp3ca (ENSHBUG00000004661) dnajc18 (ENSHBUG00000004678) ENSHBUG00000000114 ENSHBUG00000004736 gng8 (ENSHBUG00000004745) ##36 tmem45b (ENSHBUG00000004750) nfrkb (ENSHBUG00000004775) ENSHBUG00000004799 ENSHBUG00000004817 ENSHBUG00000004829 sms (ENSHBUG00000004861) Lyretail cichlid MODERN SPECIES 358 ENSNBRG00000007026 alg9 (ENSNBRG00000006986) fdxacb1 (ENSNBRG00000006939) TOMM40L (ENSNBRG00000006905) mia (ENSNBRG00000006895) bicdl2 (ENSNBRG00000006842) cryaba (ENSNBRG00000006821) ENSNBRG00000006807 DIXDC1 (ENSNBRG00000006775) dlat (ENSNBRG00000006725) zgc:165604 (ENSNBRG00000006693) PCNX3 (ENSNBRG00000006561) ENSNBRG00000006549 NRXN2 (ENSNBRG00000006479) pygma (ENSNBRG00000006375) slc22a6l (ENSNBRG00000006329) #22 nrg2a (ENSNBRG00000006035) puraa (ENSNBRG00000005980) zgc:100829 (ENSNBRG00000005964) CXXC5 (ENSNBRG00000005953) ppp3ca (ENSNBRG00000005899) dnajc18 (ENSNBRG00000005890) ENSNBRG00000005881 gng8 (ENSNBRG00000005867) ##36 tmem45b (ENSNBRG00000005792) nfrkb (ENSNBRG00000005381) ENSNBRG00000005327 ENSNBRG00000005309 ENSNBRG00000005294 sms (ENSNBRG00000005254) ENSNBRG00000005229 Nile tilapia MODERN SPECIES 1 ENSONIG00000004937 alg9 (ENSONIG00000004938) fdxacb1 (ENSONIG00000004939) TOMM40L (ENSONIG00000004940) bicdl2 (ENSONIG00000004943) mia (ENSONIG00000027408) cryaba (ENSONIG00000041517) DIXDC1 (ENSONIG00000004949) ENSONIG00000005409 dlat (ENSONIG00000004954) zgc:165604 (ENSONIG00000027264) PCNX3 (ENSONIG00000004962) ENSONIG00000031040 pygma (ENSONIG00000004983) NRXN2 (ENSONIG00000004966) slc22a6l (ENSONIG00000004990) #22 nrg2a (ENSONIG00000004994) puraa (ENSONIG00000021362) zgc:100829 (ENSONIG00000004999) CXXC5 (ENSONIG00000042757) ppp3ca (ENSONIG00000005001) BRD8 (ENSONIG00000005008) gng8 (ENSONIG00000005011) ##36 nfrkb (ENSONIG00000005012) ENSONIG00000030517 sms (ENSONIG00000005102) ENSONIG00000005105 gabrr3a (ENSONIG00000005108) ENSONIG00000005109 ENSONIG00000005110 ENSONIG00000036817 Midas cichlid MODERN SPECIES 888 ENSACIG00000004260 alg9 (ENSACIG00000004228) fdxacb1 (ENSACIG00000004208) TOMM40L (ENSACIG00000004087) bicdl2 (ENSACIG00000004024) mia (ENSACIG00000003982) cryaba (ENSACIG00000003961) DIXDC1 (ENSACIG00000003921) dlat (ENSACIG00000003890) zgc:165604 (ENSACIG00000003857) zgc:165604 (ENSACIG00000003839) PCNX3 (ENSACIG00000003723) ENSACIG00000003719 NRXN2 (ENSACIG00000003667) pygma (ENSACIG00000003618) slc22a6l (ENSACIG00000003595) #22 nrg2a (ENSACIG00000003410) puraa (ENSACIG00000003389) zgc:100829 (ENSACIG00000003374) CXXC5 (ENSACIG00000003365) ppp3ca (ENSACIG00000003318) dnajc18 (ENSACIG00000003250) ENSACIG00000003234 gng8 (ENSACIG00000003225) ##36 tmem45b (ENSACIG00000003136) nfrkb (ENSACIG00000002900) RYR1 (ENSACIG00000002680) ENSACIG00000002660 sms (ENSACIG00000002629) ENSACIG00000002611 gabrr3a (ENSACIG00000002584) Atherinomorphae ANCESTRAL SPECIES 14 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Cyprinodontiformes ANCESTRAL SPECIES 11 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Aplocheiloidei ANCESTRAL SPECIES 23 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Mangrove rivulus MODERN SPECIES 42 ENSKMAG00000022241 ENSKMAG00000022240 alg9 (ENSKMAG00000022237) fdxacb1 (ENSKMAG00000022235) TOMM40L (ENSKMAG00000022233) bicdl2 (ENSKMAG00000022231) mia (ENSKMAG00000022230) CRYAB (ENSKMAG00000022228) ENSKMAG00000022227 DIXDC1 (ENSKMAG00000022224) dlat (ENSKMAG00000022223) zgc:165604 (ENSKMAG00000022220) PCNX3 (ENSKMAG00000022213) NRXN2 (ENSKMAG00000022205) pygma (ENSKMAG00000022200) slc22a6l (ENSKMAG00000022195) #22 nrg2a (ENSKMAG00000022193) puraa (ENSKMAG00000022190) zgc:100829 (ENSKMAG00000022187) CXXC5 (ENSKMAG00000022185) ppp3ca (ENSKMAG00000022181) ENSKMAG00000022178 dnajc18 (ENSKMAG00000022177) ENSKMAG00000022176 gng8 (ENSKMAG00000022174) ##36 tmem45b (ENSKMAG00000022172) nfrkb (ENSKMAG00000022166) RYR1 (ENSKMAG00000020504) sms (ENSKMAG00000018618) ENSKMAG00000018561 gabrr3a (ENSKMAG00000018544) Turquoise killifish MODERN SPECIES 1620 ENSNFUG00015019009 ENSNFUG00015019062 alg9 (ENSNFUG00015019088) ENSNFUG00015019154 fdxacb1 (ENSNFUG00015019161) TOMM40L (ENSNFUG00015019189) bicdl2 (ENSNFUG00015019196) MIA (ENSNFUG00015019201) DIXDC1 (ENSNFUG00015019210) DLAT (ENSNFUG00015019255) zgc:165604 (ENSNFUG00015019594) PCNXL3 (ENSNFUG00015019617) NRXN2 (ENSNFUG00015019809) ENSNFUG00015021038 pygma (ENSNFUG00015021077) slc22a6l (ENSNFUG00015021709) #22 nrg2a (ENSNFUG00015021733) PURA (ENSNFUG00015021757) SH2D4B (ENSNFUG00015021760) ENSNFUG00015021765 CXXC5 (ENSNFUG00015021767) ppp3ca (ENSNFUG00015021789) BRD8 (ENSNFUG00015022213) GNG8 (ENSNFUG00015022702) ##36 tmem45b (ENSNFUG00015022704) nfrkb (ENSNFUG00015022706) ENSNFUG00015023436 SMS (ENSNFUG00015023442) ENSNFUG00015023467 ENSNFUG00015023472 Nfu_g_1_005297 (ENSNFUG00015023473) Cyprinodontoidei ANCESTRAL SPECIES 5 ENSGT00940000165141.b ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00940000162446 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00390000006852.A ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b NAME_4 ANCESTRAL SPECIES 5 ENSGT00940000166239 ENSGT00940000158605 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b Mummichog MODERN SPECIES 693 ENSFHEG00000017022 ENSFHEG00000017000 ENSFHEG00000016919 ENSFHEG00000016687 alg9 (ENSFHEG00000016673) TOMM40L (ENSFHEG00000016610) fdxacb1 (ENSFHEG00000016602) bicdl2 (ENSFHEG00000016595) mia (ENSFHEG00000016588) cryaba (ENSFHEG00000016579) dlat (ENSFHEG00000016567) zgc:165604 (ENSFHEG00000016528) PCNX3 (ENSFHEG00000016485) NRXN2 (ENSFHEG00000016312) pygma (ENSFHEG00000016258) slc22a6l (ENSFHEG00000016228) #22 nrg2a (ENSFHEG00000016058) puraa (ENSFHEG00000016026) zgc:100829 (ENSFHEG00000016013) CXXC5 (ENSFHEG00000016000) ppp3ca (ENSFHEG00000015988) ENSFHEG00000015929 dnajc18 (ENSFHEG00000015919) ENSFHEG00000015910 ENSFHEG00000015889 nfrkb (ENSFHEG00000015866) gng8 (ENSFHEG00000015599) ##36 tmem45b (ENSFHEG00000015586) ENSFHEG00000015566 ENSFHEG00000015546 sms (ENSFHEG00000015522) Sheepshead minnow MODERN SPECIES 379 ENSCVAG00000012921 alg9 (ENSCVAG00000012997) fdxacb1 (ENSCVAG00000013005) TOMM40L (ENSCVAG00000013077) bicdl2 (ENSCVAG00000013084) mia (ENSCVAG00000013088) CRYAB (ENSCVAG00000013098) DIXDC1 (ENSCVAG00000013112) dlat (ENSCVAG00000013147) zgc:165604 (ENSCVAG00000013165) PCNX3 (ENSCVAG00000013250) NRXN2 (ENSCVAG00000013423) pygma (ENSCVAG00000013455) slc22a6l (ENSCVAG00000013489) #22 nrg2a (ENSCVAG00000013810) puraa (ENSCVAG00000013829) zgc:100829 (ENSCVAG00000013847) CXXC5 (ENSCVAG00000000348) ppp3ca (ENSCVAG00000013937) dnajc18 (ENSCVAG00000000929) ENSCVAG00000013954 gng8 (ENSCVAG00000013968) ##36 tmem45b (ENSCVAG00000013976) nfrkb (ENSCVAG00000013990) RYR1 (ENSCVAG00000014212) ENSCVAG00000014236 Poeciliinae ANCESTRAL SPECIES 17 ENSGT00940000165141.b ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00940000162446 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00390000006852.A ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Poecilia ANCESTRAL SPECIES 7 ENSGT00940000165141.b ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00940000162446 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00390000006852.A ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b NAME_6 ANCESTRAL SPECIES 1 ENSGT00940000159682 ENSGT00940000165141.b ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00390000006852.A ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Sailfin molly MODERN SPECIES 30 pygma (ENSPLAG00000008627) slc22a6l (ENSPLAG00000008548) #22 nrg2a (ENSPLAG00000008521) puraa (ENSPLAG00000008486) zgc:100829 (ENSPLAG00000008475) CXXC5 (ENSPLAG00000008466) ppp3ca (ENSPLAG00000008455) dnajc18 (ENSPLAG00000008422) ENSPLAG00000008327 gng8 (ENSPLAG00000008309) ##36 tmem45b (ENSPLAG00000000717) nfrkb (ENSPLAG00000008276) ENSPLAG00000008143 sms (ENSPLAG00000008055) ENSPLAG00000007995 gabrr3a (ENSPLAG00000000721) ENSPLAG00000007961 Amazon molly MODERN SPECIES 255 ENSPFOG00000018666 alg9 (ENSPFOG00000018679) fdxacb1 (ENSPFOG00000022156) TOMM40L (ENSPFOG00000018695) bicdl2 (ENSPFOG00000018722) mia (ENSPFOG00000018730) cryaba (ENSPFOG00000018732) ENSPFOG00000018735 ENSPFOG00000024018 DIXDC1 (ENSPFOG00000018752) dlat (ENSPFOG00000024531) zgc:165604 (ENSPFOG00000018791) PCNX3 (ENSPFOG00000018811) NRXN2 (ENSPFOG00000018867) pygma (ENSPFOG00000018916) slc22a6l (ENSPFOG00000018943) #22 nrg2a (ENSPFOG00000018958) puraa (ENSPFOG00000019882) zgc:100829 (ENSPFOG00000018969) CXXC5 (ENSPFOG00000018974) ppp3ca (ENSPFOG00000018980) dnajc18 (ENSPFOG00000019007) ENSPFOG00000019029 gng8 (ENSPFOG00000019043) ##36 tmem45b (ENSPFOG00000019045) nfrkb (ENSPFOG00000019054) RYR1 (ENSPFOG00000019156) ENSPFOG00000019238 sms (ENSPFOG00000019239) ENSPFOG00000019241 gabrr3a (ENSPFOG00000019245) Guppy MODERN SPECIES 444 alg9 (ENSPREG00000017429) fdxacb1 (ENSPREG00000017453) TOMM40L (ENSPREG00000017470) bicdl2 (ENSPREG00000017492) mia (ENSPREG00000017531) cryaba (ENSPREG00000017557) ENSPREG00000017597 DIXDC1 (ENSPREG00000017718) dlat (ENSPREG00000017734) zgc:165604 (ENSPREG00000017778) PCNX3 (ENSPREG00000017823) ENSPREG00000018120 ENSPREG00000018990 ENSPREG00000019001 pygma (ENSPREG00000019018) slc22a6l (ENSPREG00000019084) #22 nrg2a (ENSPREG00000019119) puraa (ENSPREG00000019200) zgc:100829 (ENSPREG00000019205) CXXC5 (ENSPREG00000019234) ppp3ca (ENSPREG00000019247) dnajc18 (ENSPREG00000019298) ENSPREG00000019328 ENSPREG00000019348 tmem45b (ENSPREG00000019361) nfrkb (ENSPREG00000019381) ENSPREG00000019456 RYR1 (ENSPREG00000019516) sms (ENSPREG00000019739) ENSPREG00000019778 gabrr3a (ENSPREG00000019809) Platyfish MODERN SPECIES 2 ENSXMAG00000028805 ENSXMAG00000022560 ENSXMAG00000022486 alg9 (ENSXMAG00000010695) TOMM40L (ENSXMAG00000010930) fdxacb1 (ENSXMAG00000010929) bicdl2 (ENSXMAG00000010937) mia (ENSXMAG00000028208) cryaba (ENSXMAG00000010944) DIXDC1 (ENSXMAG00000010948) dlat (ENSXMAG00000010958) zgc:165604 (ENSXMAG00000022473) PCNX3 (ENSXMAG00000010981) NRXN2 (ENSXMAG00000011006) pygma (ENSXMAG00000011040) slc22a6l (ENSXMAG00000011080) #22 nrg2a (ENSXMAG00000027575) puraa (ENSXMAG00000019887) zgc:100829 (ENSXMAG00000022730) CXXC5 (ENSXMAG00000011127) ppp3ca (ENSXMAG00000025370) dnajc18 (ENSXMAG00000011151) ENSXMAG00000011168 ENSXMAG00000022923 gng8 (ENSXMAG00000026536) ##36 tmem45b (ENSXMAG00000011175) nfrkb (ENSXMAG00000011179) ENSXMAG00000022058 ENSXMAG00000023946 sms (ENSXMAG00000011323) ENSXMAG00000011343 Oryzias ANCESTRAL SPECIES 14 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Oryzias_b ANCESTRAL SPECIES 13 ENSGT00940000158605.q ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 Javanese ricefish MODERN SPECIES 5 ENSOJAG00000010161 ENSOJAG00000010133 ENSOJAG00000009853 ENSOJAG00000009820 ENSOJAG00000009797 alg9 (ENSOJAG00000009002) TOMM40L (ENSOJAG00000008892) bicdl2 (ENSOJAG00000008863) mia (ENSOJAG00000008850) cryaba (ENSOJAG00000008842) dlat (ENSOJAG00000008497) zgc:165604 (ENSOJAG00000008480) PCNX3 (ENSOJAG00000008233) ENSOJAG00000008207 NRXN2 (ENSOJAG00000006665) slc22a6l (ENSOJAG00000006189) #22 nrg2a (ENSOJAG00000006059) puraa (ENSOJAG00000006024) zgc:100829 (ENSOJAG00000006016) CXXC5 (ENSOJAG00000005976) ppp3ca (ENSOJAG00000019056) dnajc18 (ENSOJAG00000018735) BRD8 (ENSOJAG00000018611) tmem45b (ENSOJAG00000018587) nfrkb (ENSOJAG00000018509) ENSOJAG00000017532 sms (ENSOJAG00000017522) ENSOJAG00000017473 gabrr3a (ENSOJAG00000017423) ENSOJAG00000017402 ENSOJAG00000017373 Indian medaka MODERN SPECIES 4 ENSOMEG00000019236 ENSOMEG00000019274 alg9 (ENSOMEG00000019334) fdxacb1 (ENSOMEG00000019353) TOMM40L (ENSOMEG00000019403) bicdl2 (ENSOMEG00000019474) mia (ENSOMEG00000019494) cryaba (ENSOMEG00000019508) DIXDC1 (ENSOMEG00000019547) dlat (ENSOMEG00000019613) zgc:165604 (ENSOMEG00000019577) PCNX3 (ENSOMEG00000019664) ENSOMEG00000019676 NRXN2 (ENSOMEG00000019953) pygma (ENSOMEG00000020015) slc22a6l (ENSOMEG00000020052) #22 nrg2a (ENSOMEG00000020207) puraa (ENSOMEG00000020248) zgc:100829 (ENSOMEG00000020262) CXXC5 (ENSOMEG00000020272) ppp3ca (ENSOMEG00000020331) dnajc18 (ENSOMEG00000020357) ENSOMEG00000000531 ENSOMEG00000020390 tmem45b (ENSOMEG00000020416) nfrkb (ENSOMEG00000020515) RYR1 (ENSOMEG00000020650) ENSOMEG00000000550 sms (ENSOMEG00000020761) ENSOMEG00000020789 gabrr3a (ENSOMEG00000020839) Oryzias_a ANCESTRAL SPECIES 2 ENSGT00390000001844.a.b.a.a ENSGT00950000183090.D ENSGT00940000160701 ENSGT00390000003308.b ENSGT00940000160797 ENSGT00950000182767.b.a.b.b.b ENSGT00940000157434 ENSGT00990000204242 ENSGT00950000182903.b.b.o.b ENSGT00940000154943 ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000177141 ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT00940000158778.c ENSGT00950000183162.a.a.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT01100000263497.D ##36 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b Chinese medaka MODERN SPECIES 717 ENSOSIG00000021271 ENSOSIG00000021268 alg9 (ENSOSIG00000020942) TOMM40L (ENSOSIG00000020874) bicdl2 (ENSOSIG00000020863) mia (ENSOSIG00000020857) cryaba (ENSOSIG00000020852) ENSOSIG00000020848 ENSOSIG00000020845 dlat (ENSOSIG00000020681) zgc:165604 (ENSOSIG00000020673) PCNX3 (ENSOSIG00000020644) ENSOSIG00000020634 NRXN2 (ENSOSIG00000020370) pygma (ENSOSIG00000020334) slc22a6l (ENSOSIG00000020312) #22 nrg2a (ENSOSIG00000020301) puraa (ENSOSIG00000020285) zgc:100829 (ENSOSIG00000020284) CXXC5 (ENSOSIG00000020280) ppp3ca (ENSOSIG00000014009) dnajc18 (ENSOSIG00000013878) BRD8 (ENSOSIG00000013859) gng8 (ENSOSIG00000013854) ##36 tmem45b (ENSOSIG00000013853) nfrkb (ENSOSIG00000013852) ENSOSIG00000011501 sms (ENSOSIG00000011500) ENSOSIG00000011499 gabrr3a (ENSOSIG00000011263) ENSOSIG00000011254 Japanese Medaka HdrR MODERN SPECIES 5 cfbl (ENSORLG00000005801) ENSORLG00000005821 fdxacb1 (ENSORLG00000005838) ENSORLG00000005871 bicdl2 (ENSORLG00000027576) mia (ENSORLG00000028211) cryaba (ENSORLG00000005891) ENSORLG00000005899 DIXDC1 (ENSORLG00000020151) dlat (ENSORLG00000021909) zgc:165604 (ENSORLG00000024481) PCNX3 (ENSORLG00000005917) ENSORLG00000005948 ENSORLG00000025532 pygma (ENSORLG00000006042) slc22a6l (ENSORLG00000006079) #22 nrg2a (ENSORLG00000006095) puraa (ENSORLG00000006100) zgc:100829 (ENSORLG00000026494) CXXC5 (ENSORLG00000006108) ppp3ca (ENSORLG00000006170) dnajc18 (ENSORLG00000006189) ENSORLG00000026751 ENSORLG00000025967 gng8 (ENSORLG00000025735) ##36 tmem45b (ENSORLG00000006252) nfrkb (ENSORLG00000006270) ENSORLG00000006365 ENSORLG00000026245 ENSORLG00000027409 sms (ENSORLG00000006393) Cod MODERN SPECIES 20 hinfp (ENSGMOG00000005447) ENSGMOG00000005441 ENSGMOG00000005411 nherf4b (ENSGMOG00000018003) atp5l (ENSGMOG00000018044) ftr82 (ENSGMOG00000018049) ftr83 (ENSGMOG00000018070) ruvbl2 (ENSGMOG00000018089) ENSGMOG00000006073 ENSGMOG00000028148 spns3 (ENSGMOG00000018969) zgc:165604 (ENSGMOG00000019168) ENSGMOG00000019179 ENSGMOG00000019201 pygma (ENSGMOG00000019226) slc22a6l (ENSGMOG00000019242) #22 nrg2a (ENSGMOG00000019254) puraa (ENSGMOG00000019265) zgc:100829 (ENSGMOG00000032118) ENSGMOG00000019280 ppp3ca (ENSGMOG00000013465) ENSGMOG00000028674 ENSGMOG00000019297 gng8 (ENSGMOG00000025665) ##36 ENSGMOG00000019311 nfrkb (ENSGMOG00000019315) ENSGMOG00000019332 ENSGMOG00000034278 DCX (ENSGMOG00000034349) ENSGMOG00000003178 PAK3 (ENSGMOG00000003145) Protacanthopterygii ANCESTRAL SPECIES 83 ENSGT00940000155078.b ENSGT00940000156996.f.a.a ENSGT00390000007335 ENSGT00940000165459.a.a.b ENSGT00940000157436.b ENSGT00940000153968.a.b.b.b.p ENSGT00940000159147.b.a ENSGT00390000005232 ENSGT00940000158605.s ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000156392.b ENSGT00940000158735 ENSGT00940000155978.a.b ENSGT00940000160483.k.a ENSGT00950000183148.b.a.g.b ENSGT00940000154901.C.b #22 ENSGT01080000257601 ENSGT00940000164430.a.a ENSGT00940000158778.c ENSGT00950000183162.a.a.c.d ENSGT00950000183162.a.a.c.c ENSGT00940000157357.e.a ENSGT00940000154108.a.d ENSGT00940000165110.a ENSGT00940000166356 ENSGT00530000064262.pc.a ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000161460 ENSGT00940000158617 Salmoninae ANCESTRAL SPECIES 156 ENSGT00950000183209.a.a.b.c.b ENSGT00940000159147.b.a ENSGT00390000005232 ENSGT00940000158605.s.b ENSGT00950000182898.a.a.a.a.a.h.b ENSGT00990000212328 ENSGT00940000158735.d ENSGT00940000155978.a.b.b.b ENSGT00940000160483.k.a.c ENSGT00950000183148.b.a.g.b.d ENSGT00940000154901.C.b #22 ENSGT01080000257601.a ENSGT00940000164430.a.a ENSGT00940000158778.c.d ENSGT00950000183162.a.a.c.c ENSGT00940000157357.e.a.c ENSGT00940000154108.a.d.d ENSGT00940000153169.B.n.b ENSGT00940000165110.a.e ENSGT00940000166356.b ENSGT00530000064262.pc.a.t ENSGT00940000156931.e ENSGT00950000182950.A.h ENSGT00940000165282.b.b ENSGT00940000161460 ENSGT00390000015355.`b.b Salmoninae_a ANCESTRAL SPECIES 12 ENSGT00940000154833.a.g.b ENSGT00940000153460.c.b.c.b ENSGT00940000164309.t ENSGT00390000007335.d ENSGT00940000165459.a.a.b.d ENSGT00940000157436.b.b ENSGT00950000183209.a.a.b.c.b ENSGT00940000159147.b.a ENSGT00390000005232 ENSGT00940000158605.s.b ENSGT00950000182898.a.a.a.a.a.h.b ENSGT00940000158735.d ENSGT00940000155978.a.b.b.b ENSGT00940000160483.k.a.c ENSGT00950000183148.b.a.g.b.d ENSGT00940000154901.C.b #22 ENSGT01080000257601.a ENSGT00940000164430.a.a ENSGT00940000158778.c.d ENSGT00950000183162.a.a.c.c ENSGT00940000157357.e.a.c ENSGT00940000154108.a.d.d ENSGT00940000153169.B.n.b ENSGT00940000165110.a.e.b ENSGT00940000166356.b ENSGT00530000064262.pc.a.t ENSGT00940000156931.e ENSGT00950000182950.A.h ENSGT00940000165282.b.b ENSGT00940000161460 ENSGT00390000015355.`b.b Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00940000154833.a.g.b ENSGT00940000153460.c.b.c.b ENSGT00940000164309.t ENSGT00390000007335.d ENSGT00940000165459.a.a.b.d ENSGT00940000157436.b.b ENSGT00950000183209.a.a.b.c.b ENSGT00940000159147.b.a ENSGT00390000005232 ENSGT00940000158605.s.b ENSGT00950000182898.a.a.a.a.a.h.b ENSGT00940000158735.d ENSGT00940000155978.a.b.b.b ENSGT00940000160483.k.a.c ENSGT00950000183148.b.a.g.b.d ENSGT00940000154901.C.b #22 ENSGT01080000257601.a ENSGT00940000164430.a.a ENSGT00940000158778.c.d ENSGT00950000183162.a.a.c.c ENSGT00940000157357.e.a.c ENSGT00940000154108.a.d.d ENSGT00940000153169.B.n.b ENSGT00940000165110.a.e.b ENSGT00940000166356.b ENSGT00530000064262.pc.a.t ENSGT00940000156931.e ENSGT00950000182950.A.h ENSGT00940000165282.b.b ENSGT00940000161460 ENSGT00390000015355.`b.b Oncorhynchus_a ANCESTRAL SPECIES 20 ENSGT00940000154833.a.g.b ENSGT00940000153460.c.b.c.b ENSGT00940000164309.t ENSGT00390000007335.d ENSGT00940000165459.a.a.b.d ENSGT00940000157436.b.b ENSGT00950000183209.a.a.b.c.b ENSGT00940000159147.b.a ENSGT00390000005232 ENSGT00940000158605.s.b ENSGT00950000182898.a.a.a.a.a.h.b ENSGT00940000158735.d ENSGT00940000155978.a.b.b.b ENSGT00940000160483.k.a.c ENSGT00950000183148.b.a.g.b.d ENSGT00940000154901.C.b #22 ENSGT00940000164430.a.a ENSGT00940000158778.c.d ENSGT00950000183162.a.a.c.c ENSGT00940000157357.e.a.c ENSGT00940000154108.a.d.d ENSGT00940000153169.B.n.b ENSGT00940000165110.a.e.b ENSGT00940000166356.b ENSGT00530000064262.pc.a.t ENSGT00940000156931.e ENSGT00950000182950.A.h ENSGT00940000165282.b.b ENSGT00940000161460 ENSGT00940000154348.c.b.b.a.b.d ENSGT00390000015355.`b.b Chinook salmon MODERN SPECIES 26 tmtops3b (ENSOTSG00005010736) ENSOTSG00005010737 fhl1b (ENSOTSG00005010739) slc9a6b (ENSOTSG00005010740) il2rga (ENSOTSG00005011474) dpp3 (ENSOTSG00005011481) ENSOTSG00005013172 rbm14a (ENSOTSG00005013175) CAPN1 (ENSOTSG00005013242) bbs1 (ENSOTSG00005028335) ENSOTSG00005029671 ENSOTSG00005029677 NRXN2 (ENSOTSG00005036454) RASGRP2 (ENSOTSG00005036924) pygma (ENSOTSG00005036973) slc22a6l (ENSOTSG00005037152) #22 ENSOTSG00005037158 nrg2a (ENSOTSG00005037159) ENSOTSG00005037220 dnajc18 (ENSOTSG00005037222) BRD8 (ENSOTSG00005037226) kif20a (ENSOTSG00005037229) cdc23 (ENSOTSG00005037233) ENSOTSG00005037244 CDC25C (ENSOTSG00005037245) ENSOTSG00005037247 ugdh (ENSOTSG00005037248) wdr55 (ENSOTSG00005037283) ENSOTSG00005037284 ENSOTSG00005037286 si:dkey-251i10.2 (ENSOTSG00005037288) Coho salmon MODERN SPECIES 21 slc9a6b (ENSOKIG00005042626) ENSOKIG00005044015 dpp3 (ENSOKIG00005044072) ENSOKIG00005044408 rbm14a (ENSOKIG00005044504) pacs1a (ENSOKIG00005044587) ENSOKIG00005045331 bbs1 (ENSOKIG00005046532) ENSOKIG00005046878 slc29a2 (ENSOKIG00005046909) PCNX3 (ENSOKIG00005046991) NRXN2 (ENSOKIG00005048164) ENSOKIG00005048398 RASGRP2 (ENSOKIG00005048409) pygma (ENSOKIG00005048500) slc22a6l (ENSOKIG00005048627) #22 ENSOKIG00005048752 nrg2a (ENSOKIG00005048772) puraa (ENSOKIG00005048823) zgc:100829 (ENSOKIG00005048828) CXXC5 (ENSOKIG00005048832) ENSOKIG00005048862 ppp3ca (ENSOKIG00005049054) ENSOKIG00005049106 BRD8 (ENSOKIG00005049118) KIF20A (ENSOKIG00005049127) cdc23 (ENSOKIG00005049176) ENSOKIG00005049280 CDC25C (ENSOKIG00005049286) ENSOKIG00005049294 ENSOKIG00005049301 Rainbow trout MODERN SPECIES 364 fhl1b (ENSOMYG00000041803) il2rc2 (ENSOMYG00000041376) slc9a6b (ENSOMYG00000041463) dpp3 (ENSOMYG00000040545) ENSOMYG00000040326 rbm14a (ENSOMYG00000040313) pacs1a (ENSOMYG00000040229) ENSOMYG00000032016 bbs1 (ENSOMYG00000029975) cfbl (ENSOMYG00000029511) ENSOMYG00000028756 ENSOMYG00000028233 ENSOMYG00000028008 ENSOMYG00000059402 pygma (ENSOMYG00000026264) slc22a6l (ENSOMYG00000025891) #22 ENSOMYG00000053845 ENSOMYG00000025820 ENSOMYG00000063212 ENSOMYG00000050364 nrg2a (ENSOMYG00000025227) puraa (ENSOMYG00000077241) ENSOMYG00000052381 ENSOMYG00000023934 ENSOMYG00000070735 ENSOMYG00000067480 ppp3ca (ENSOMYG00000023759) ENSOMYG00000023723 BRD8 (ENSOMYG00000023684) kif20a (ENSOMYG00000023590) cdc23 (ENSOMYG00000023326) Salmo ANCESTRAL SPECIES 1 ENSGT01100000263502.A.a.a.a.a.b.f ENSGT00940000154833.a.g.a ENSGT00940000153460.c.b.c.b ENSGT00940000164309.t ENSGT00390000007335.d ENSGT00940000165459.a.a.b.d ENSGT00940000157436.b.b ENSGT00950000183209.a.a.b.c.b ENSGT00940000159147.b.a ENSGT00390000005232 ENSGT00940000158605.s.b ENSGT00940000158735.d ENSGT00940000155978.a.b.b.b ENSGT00940000160483.k.a.c ENSGT00950000183148.b.a.g.b.d ENSGT00940000154901.C.b #22 ENSGT01080000257601.a ENSGT00940000164430.a.a ENSGT00940000158778.c.d ENSGT00950000183162.a.a.c.c ENSGT00940000157357.e.a.c ENSGT01100000266631 ENSGT00940000154108.a.d.d ENSGT00940000153169.B.n.b ENSGT00940000165110.a.e.b ENSGT00940000165110.a.e.a ENSGT00940000166356.b ENSGT00530000064262.pc.a.t ENSGT00940000156931.e ENSGT00950000182950.A.h ENSGT00940000165282.b.b River trout MODERN SPECIES 3 il2rga (ENSSTUG00000012904) dpp3 (ENSSTUG00000011636) ENSSTUG00000011463 rbm14a (ENSSTUG00000011379) ENSSTUG00000011360 pacs1a (ENSSTUG00000011109) CAPN1 (ENSSTUG00000007130) bbs1 (ENSSTUG00000005212) ENSSTUG00000004863 ENSSTUG00000004841 ENSSTUG00000004835 PCNX3 (ENSSTUG00000002619) NRXN2 (ENSSTUG00000001252) RASGRP2 (ENSSTUG00000049179) pygma (ENSSTUG00000049086) slc22a6l (ENSSTUG00000049039) #22 ENSSTUG00000049032 ENSSTUG00000049030 nrg2a (ENSSTUG00000048890) puraa (ENSSTUG00000048881) ENSSTUG00000048879 ENSSTUG00000048875 CXXC5 (ENSSTUG00000048873) ENSSTUG00000048861 ppp3ca (ENSSTUG00000048713) ENSSTUG00000048707 dnajc18 (ENSSTUG00000048690) BRD8 (ENSSTUG00000048659) kif20a (ENSSTUG00000048645) cdc23 (ENSSTUG00000048607) ENSSTUG00000048601 Atlantic salmon MODERN SPECIES 2 ENSSSAG00000062995 ENSSSAG00000062990 ENSSSAG00000051839 ENSSSAG00000042506 dpp3 (ENSSSAG00000051920) ENSSSAG00000053299 rbm14a (ENSSSAG00000053395) pacs1a (ENSSSAG00000053509) ENSSSAG00000053959 bbs1 (ENSSSAG00000061521) ENSSSAG00000121391 ENSSSAG00000062791 ENSSSAG00000042162 rasgrp2 (ENSSSAG00000042038) pygma (ENSSSAG00000010242) slc22a6l (ENSSSAG00000010033) #22 ENSSSAG00000010021 nrg2a (ENSSSAG00000009743) puraa (ENSSSAG00000116216) ENSSSAG00000009630 ENSSSAG00000093928 UB2D2 (ENSSSAG00000108861) ppp3ca (ENSSSAG00000045428) djc18 (ENSSSAG00000007138) BRD8 (ENSSSAG00000007120) kif20a (ENSSSAG00000007082) cdc23 (ENSSSAG00000006796) ENSSSAG00000006766 CDC25C (ENSSSAG00000006736) ENSSSAG00000080895 wdr55 (ENSSSAG00000006717) Huchen MODERN SPECIES 2489 ENSHHUG00000035694 RASGRP2 (ENSHHUG00000035678) pygma (ENSHHUG00000035446) ENSHHUG00000035442 slc22a6l (ENSHHUG00000035367) #22 ENSHHUG00000035365 ENSHHUG00000035364 nrg2a (ENSHHUG00000035359) Northern pike MODERN SPECIES 6 ENSELUG00000023688 rbm14a (ENSELUG00000023633) actn3a (ENSELUG00000023625) pacs1a (ENSELUG00000023598) ENSELUG00000023592 ENSELUG00000023546 bbs1 (ENSELUG00000023454) ENSELUG00000023391 slc29a2 (ENSELUG00000023361) zgc:165604 (ENSELUG00000023306) PCNX3 (ENSELUG00000023270) ENSELUG00000031238 NRXN2 (ENSELUG00000023105) RASGRP2 (ENSELUG00000022875) pygma (ENSELUG00000022863) slc22a6l (ENSELUG00000022804) #22 ENSELUG00000027515 ENSELUG00000022722 nrg2a (ENSELUG00000022713) puraa (ENSELUG00000029128) zgc:100829 (ENSELUG00000022554) CXXC5 (ENSELUG00000022501) ENSELUG00000022490 ppp3ca (ENSELUG00000022406) dnajc18 (ENSELUG00000022317) BRD8 (ENSELUG00000000956) kif20a (ENSELUG00000022152) cdc23 (ENSELUG00000022129) ENSELUG00000022081 CDC25C (ENSELUG00000022043) ENSELUG00000022018 Spotted gar MODERN SPECIES 667 cd248a (ENSLOCG00000001687) SSTR4 (ENSLOCG00000017606) nit1 (ENSLOCG00000001670) b4gat1 (ENSLOCG00000001655) six7 (ENSLOCG00000001646) ENSLOCG00000001634 ENSLOCG00000001626 ENSLOCG00000001609 actn3a (ENSLOCG00000001588) prkd4 (ENSLOCG00000001570) ENSLOCG00000001555 zdhhc24 (ENSLOCG00000001541) pacs1a (ENSLOCG00000001515) ENSLOCG00000001503 ENSLOCG00000001490 ENSLOCG00000001481 #22 syvn1 (ENSLOCG00000001464) ENSLOCG00000001445 ENSLOCG00000001394 macrod1 (ENSLOCG00000001373) fermt3b (ENSLOCG00000001364) trpt1 (ENSLOCG00000001345) ENSLOCG00000001327 #33 adssl (ENSLOCG00000001306) gng3 (ENSLOCG00000001294) #36 bscl2l (ENSLOCG00000001280) #37 nxf1a (ENSLOCG00000001254) #28 ENSLOCG00000001233 ENSLOCG00000001215 ENSLOCG00000001206 trmt112 (ENSLOCG00000001190) Reedfish MODERN SPECIES ENSECRG00000010403 ENSECRG00000010397 ENSECRG00000010392 #33 trpt1 (ENSECRG00000010387) fermt3b (ENSECRG00000010376) stip1 (ENSECRG00000010371) FLRT1 (ENSECRG00000010329) #7 macrod1 (ENSECRG00000010304) AHNAK (ENSECRG00000010283) eef1g (ENSECRG00000010267) polr2g (ENSECRG00000010250) #32 ENSECRG00000010229 GPR137 (ENSECRG00000010214) syvn1 (ENSECRG00000010204) capn1 (ENSECRG00000010180) slc22a6l (ENSECRG00000010165) #22 ENSECRG00000010156 otub1a (ENSECRG00000010147) #8 cskmt (ENSECRG00000010141) kdm7ab (ENSECRG00000010121) ENSECRG00000010106 RAB19 (ENSECRG00000010093) hdhd5 (ENSECRG00000010083) ccdc77 (ENSECRG00000010067) ENSECRG00000010046 SLC6A13 (ENSECRG00000010020) ENSECRG00000010002 ENSECRG00000009914 B4GALNT3 (ENSECRG00000009855) fkbp4 (ENSECRG00000009835) ddx11 (ENSECRG00000009810) Euteleostomi DUPLICATION Euteleostomi ANCESTRAL SPECIES ENSGT00940000154901.C.a.a ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00940000154901.C.a.a ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00940000154901.C.a.a ##22 Anura DUPLICATION Anura ANCESTRAL SPECIES ENSGT00940000154901.C.a.a.a ##22 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 1 ENSLLEG00000030324 ENSLLEG00000030317 ENSLLEG00000030309 #20 ENSLLEG00000030300 ENSLLEG00000030287 ENSLLEG00000030281 ##22 ENSLLEG00000030270 ENSLLEG00000030255 ##22 CHRM1 (ENSLLEG00000030251) #24 DPF2 (ENSLLEG00000030191) CDC42EP2 (ENSLLEG00000030167) ENSLLEG00000030157 ENSLLEG00000030153 ENSLLEG00000030096 ENSLLEG00000028827 ##22 ENSLLEG00000024059 ##22 ENSLLEG00000021794 ##22 CAPN1 (ENSLLEG00000021343) SPDYC (ENSLLEG00000021138) SYVN1 (ENSLLEG00000029889) ENSLLEG00000029848 MRPL49 (ENSLLEG00000029792) ENSLLEG00000029779 ZNHIT2 (ENSLLEG00000029769) ENSLLEG00000029752 TM7SF2 (ENSLLEG00000029548) ENSLLEG00000029521 VPS51 (ENSLLEG00000029442) EHD1 (ENSLLEG00000029388) ENSLLEG00000029370 ENSLLEG00000029366 Leishan spiny toad MODERN SPECIES 1 ENSLLEG00000029356 ENSLLEG00000029366 ENSLLEG00000029370 EHD1 (ENSLLEG00000029388) VPS51 (ENSLLEG00000029442) ENSLLEG00000029521 TM7SF2 (ENSLLEG00000029548) ENSLLEG00000029752 ZNHIT2 (ENSLLEG00000029769) ENSLLEG00000029779 MRPL49 (ENSLLEG00000029792) ENSLLEG00000029848 SYVN1 (ENSLLEG00000029889) SPDYC (ENSLLEG00000021138) CAPN1 (ENSLLEG00000021343) ENSLLEG00000021794 ##22 ENSLLEG00000024059 ##22 ENSLLEG00000028827 ##22 ENSLLEG00000030096 ENSLLEG00000030153 ENSLLEG00000030157 CDC42EP2 (ENSLLEG00000030167) DPF2 (ENSLLEG00000030191) CHRM1 (ENSLLEG00000030251) #24 ENSLLEG00000030255 ##22 ENSLLEG00000030270 ENSLLEG00000030281 ##22 ENSLLEG00000030287 ENSLLEG00000030300 ENSLLEG00000030309 #20 ENSLLEG00000030317 Anura ANCESTRAL SPECIES 211 ENSGT00940000154901.C.a.b.a ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000154901.C.a.a.b ##22 ENSGT00940000159147 ENSGT00940000154524.a.m ENSGT00940000157743 ENSGT00940000168631 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a ENSGT00940000162464 Frog MODERN SPECIES 4 slc22a8 (ENSXETG00000026214) ##22 lgals12 (ENSXETG00000043284) plaat3 (ENSXETG00000038318) plaat4 (ENSXETG00000029956) kcne2 (ENSXETG00000047008) zfp36l2.2 (ENSXETG00000023254) zfp36l2.1 (ENSXETG00000023255) ENSXETG00000038983 cdhr5 (ENSXETG00000033148) drd4 (ENSXETG00000036892) tmem80 (ENSXETG00000035276) deaf1 (ENSXETG00000033517) eps8l2 (ENSXETG00000032637) cdc42ep2 (ENSXETG00000023288) pola2 (ENSXETG00000023289) slc22a20p.1 (ENSXETG00000033231) ##22 capn1 (ENSXETG00000023299) tlrs5 (ENSXETG00000030446) znhit2 (ENSXETG00000023323) sac3d1 (ENSXETG00000033800) tm7sf2 (ENSXETG00000023319) fau (ENSXETG00000026219) mrpl49 (ENSXETG00000031584) prpf39.2 (ENSXETG00000033731) syvn1 (ENSXETG00000023327) gatd1 (ENSXETG00000047298) ENSXETG00000039718 slc25a22 (ENSXETG00000023334) pidd1 (ENSXETG00000033984) rplp2 (ENSXETG00000019024) pnpla2 (ENSXETG00000019027) Leishan spiny toad MODERN SPECIES 1 ENSLLEG00000030330 ENSLLEG00000030324 ENSLLEG00000030317 ENSLLEG00000030309 #20 ENSLLEG00000030300 ENSLLEG00000030287 ENSLLEG00000030281 ##22 ENSLLEG00000030270 ENSLLEG00000030255 ##22 CHRM1 (ENSLLEG00000030251) #24 DPF2 (ENSLLEG00000030191) CDC42EP2 (ENSLLEG00000030167) ENSLLEG00000030157 ENSLLEG00000030153 ENSLLEG00000030096 ENSLLEG00000028827 ##22 ENSLLEG00000024059 ##22 ENSLLEG00000021794 ##22 CAPN1 (ENSLLEG00000021343) SPDYC (ENSLLEG00000021138) SYVN1 (ENSLLEG00000029889) ENSLLEG00000029848 MRPL49 (ENSLLEG00000029792) ENSLLEG00000029779 ZNHIT2 (ENSLLEG00000029769) ENSLLEG00000029752 TM7SF2 (ENSLLEG00000029548) ENSLLEG00000029521 VPS51 (ENSLLEG00000029442) EHD1 (ENSLLEG00000029388) ENSLLEG00000029370 Actinopterygii ANCESTRAL SPECIES ENSGT00940000154901.C.a.a ##22 Reedfish DUPLICATION Reedfish DUPLICATION Reedfish DUPLICATION Reedfish DUPLICATION Reedfish DUPLICATION Reedfish MODERN SPECIES zfpl1 (ENSECRG00000006191) CDCA5 (ENSECRG00000006178) SLC25A45 (ENSECRG00000006172) frmd8 (ENSECRG00000009199) slc8a4b (ENSECRG00000009191) map4k2 (ENSECRG00000009164) men1 (ENSECRG00000009149) rtn3 (ENSECRG00000009133) #15 ENSECRG00000009124 #14 ENSECRG00000008020 ##22 ENSECRG00000007467 ##22 ENSECRG00000006601 ##22 ENSECRG00000006498 ENSECRG00000004110 ##22 ENSECRG00000003078 ##22 ENSECRG00000002916 ##22 MARK4 (ENSECRG00000002885) GAL3ST3 (ENSECRG00000002866) ENSECRG00000002843 dpp3 (ENSECRG00000002817) ENSECRG00000002798 taf6l (ENSECRG00000002757) #31 cth1 (ENSECRG00000002750) mta2 (ENSECRG00000002736) ENSECRG00000002670 rpl18a (ENSECRG00000002630) ENSECRG00000002574 ENSECRG00000002504 cdpf1 (ENSECRG00000002431) creb3l2 (ENSECRG00000002420) ssbp1 (ENSECRG00000002404) Reedfish MODERN SPECIES vps51 (ENSECRG00000006211) zfpl1 (ENSECRG00000006191) CDCA5 (ENSECRG00000006178) SLC25A45 (ENSECRG00000006172) frmd8 (ENSECRG00000009199) slc8a4b (ENSECRG00000009191) map4k2 (ENSECRG00000009164) men1 (ENSECRG00000009149) rtn3 (ENSECRG00000009133) #15 ENSECRG00000009124 #14 ENSECRG00000008020 ##22 ENSECRG00000007467 ##22 ENSECRG00000006601 ##22 ENSECRG00000006498 ENSECRG00000004110 ##22 ENSECRG00000003078 ##22 ENSECRG00000002916 ##22 MARK4 (ENSECRG00000002885) GAL3ST3 (ENSECRG00000002866) ENSECRG00000002843 dpp3 (ENSECRG00000002817) ENSECRG00000002798 taf6l (ENSECRG00000002757) #31 cth1 (ENSECRG00000002750) mta2 (ENSECRG00000002736) ENSECRG00000002670 rpl18a (ENSECRG00000002630) ENSECRG00000002574 ENSECRG00000002504 cdpf1 (ENSECRG00000002431) creb3l2 (ENSECRG00000002420) Reedfish MODERN SPECIES ENSECRG00000006229 vps51 (ENSECRG00000006211) zfpl1 (ENSECRG00000006191) CDCA5 (ENSECRG00000006178) SLC25A45 (ENSECRG00000006172) frmd8 (ENSECRG00000009199) slc8a4b (ENSECRG00000009191) map4k2 (ENSECRG00000009164) men1 (ENSECRG00000009149) rtn3 (ENSECRG00000009133) #15 ENSECRG00000009124 #14 ENSECRG00000008020 ##22 ENSECRG00000007467 ##22 ENSECRG00000006601 ##22 ENSECRG00000006498 ENSECRG00000004110 ##22 ENSECRG00000003078 ##22 ENSECRG00000002916 ##22 MARK4 (ENSECRG00000002885) GAL3ST3 (ENSECRG00000002866) ENSECRG00000002843 dpp3 (ENSECRG00000002817) ENSECRG00000002798 taf6l (ENSECRG00000002757) #31 cth1 (ENSECRG00000002750) mta2 (ENSECRG00000002736) ENSECRG00000002670 rpl18a (ENSECRG00000002630) ENSECRG00000002574 ENSECRG00000002504 cdpf1 (ENSECRG00000002431) Reedfish DUPLICATION Reedfish MODERN SPECIES ENSECRG00000006252 znhit2 (ENSECRG00000006245) tm7sf2 (ENSECRG00000006237) ENSECRG00000006229 vps51 (ENSECRG00000006211) zfpl1 (ENSECRG00000006191) CDCA5 (ENSECRG00000006178) SLC25A45 (ENSECRG00000006172) frmd8 (ENSECRG00000009199) slc8a4b (ENSECRG00000009191) map4k2 (ENSECRG00000009164) men1 (ENSECRG00000009149) rtn3 (ENSECRG00000009133) #15 ENSECRG00000009124 #14 ENSECRG00000008020 ##22 ENSECRG00000007467 ##22 ENSECRG00000006601 ##22 ENSECRG00000006498 ENSECRG00000004110 ##22 ENSECRG00000003078 ##22 ENSECRG00000002916 ##22 MARK4 (ENSECRG00000002885) GAL3ST3 (ENSECRG00000002866) ENSECRG00000002843 dpp3 (ENSECRG00000002817) ENSECRG00000002798 taf6l (ENSECRG00000002757) #31 cth1 (ENSECRG00000002750) mta2 (ENSECRG00000002736) ENSECRG00000002670 rpl18a (ENSECRG00000002630) Reedfish MODERN SPECIES ENSECRG00000006265 ENSECRG00000006252 znhit2 (ENSECRG00000006245) tm7sf2 (ENSECRG00000006237) ENSECRG00000006229 vps51 (ENSECRG00000006211) zfpl1 (ENSECRG00000006191) CDCA5 (ENSECRG00000006178) SLC25A45 (ENSECRG00000006172) frmd8 (ENSECRG00000009199) slc8a4b (ENSECRG00000009191) map4k2 (ENSECRG00000009164) men1 (ENSECRG00000009149) rtn3 (ENSECRG00000009133) #15 ENSECRG00000009124 #14 ENSECRG00000008020 ##22 ENSECRG00000007467 ##22 ENSECRG00000006601 ##22 ENSECRG00000006498 ENSECRG00000004110 ##22 ENSECRG00000003078 ##22 ENSECRG00000002916 ##22 MARK4 (ENSECRG00000002885) GAL3ST3 (ENSECRG00000002866) ENSECRG00000002843 dpp3 (ENSECRG00000002817) ENSECRG00000002798 taf6l (ENSECRG00000002757) #31 cth1 (ENSECRG00000002750) mta2 (ENSECRG00000002736) ENSECRG00000002670 Reedfish MODERN SPECIES znhit2 (ENSECRG00000006245) tm7sf2 (ENSECRG00000006237) ENSECRG00000006229 vps51 (ENSECRG00000006211) zfpl1 (ENSECRG00000006191) CDCA5 (ENSECRG00000006178) SLC25A45 (ENSECRG00000006172) frmd8 (ENSECRG00000009199) slc8a4b (ENSECRG00000009191) map4k2 (ENSECRG00000009164) men1 (ENSECRG00000009149) rtn3 (ENSECRG00000009133) #15 ENSECRG00000009124 #14 ENSECRG00000008020 ##22 ENSECRG00000007467 ##22 ENSECRG00000006601 ##22 ENSECRG00000006498 ENSECRG00000004110 ##22 ENSECRG00000003078 ##22 ENSECRG00000002916 ##22 MARK4 (ENSECRG00000002885) GAL3ST3 (ENSECRG00000002866) ENSECRG00000002843 dpp3 (ENSECRG00000002817) ENSECRG00000002798 taf6l (ENSECRG00000002757) #31 cth1 (ENSECRG00000002750) mta2 (ENSECRG00000002736) ENSECRG00000002670 rpl18a (ENSECRG00000002630) ENSECRG00000002574 Reedfish MODERN SPECIES 16 ftcd (ENSECRG00000019704) lss (ENSECRG00000019653) MCM3AP (ENSECRG00000019587) ybey (ENSECRG00000019552) ENSECRG00000019528 cnot9 (ENSECRG00000019449) PLCD4 (ENSECRG00000019362) ZNF142 (ENSECRG00000019317) bcs1l (ENSECRG00000019288) sh3bp4 (ENSECRG00000019270) gypc (ENSECRG00000019252) ENSECRG00000018784 ENSECRG00000018649 ENSECRG00000018623 ENSECRG00000018595 ENSECRG00000018042 ##22 ENSECRG00000017957 ENSECRG00000017950 ENSECRG00000016844 mnx2b (ENSECRG00000016674) ENSECRG00000016361 ENSECRG00000016270 ihhb (ENSECRG00000016247) ENSECRG00000016216 bin1b (ENSECRG00000016008) cyp27c1 (ENSECRG00000015867) ercc3 (ENSECRG00000015667) MAP3K2 (ENSECRG00000015533) dnpep (ENSECRG00000015481) ENSECRG00000015433 DNAJB2 (ENSECRG00000015382) Euteleostomi ANCESTRAL SPECIES ENSGT00940000154901.C.a.b ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00940000154901.C.a.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00940000154901.C.a.b ##22 Anura DUPLICATION Anura ANCESTRAL SPECIES 211 ENSGT00940000154901.C.a.b.a ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000154901.C.a.a.b ##22 ENSGT00940000159147 ENSGT00940000154524.a.m ENSGT00940000157743 ENSGT00940000168631 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a ENSGT00940000162464 Frog MODERN SPECIES 4 slc22a20p.1 (ENSXETG00000033231) ##22 pola2 (ENSXETG00000023289) cdc42ep2 (ENSXETG00000023288) eps8l2 (ENSXETG00000032637) deaf1 (ENSXETG00000033517) tmem80 (ENSXETG00000035276) drd4 (ENSXETG00000036892) cdhr5 (ENSXETG00000033148) ENSXETG00000038983 zfp36l2.1 (ENSXETG00000023255) zfp36l2.2 (ENSXETG00000023254) kcne2 (ENSXETG00000047008) plaat4 (ENSXETG00000029956) plaat3 (ENSXETG00000038318) lgals12 (ENSXETG00000043284) slc22a8 (ENSXETG00000026214) ##22 ENSXETG00000048026 chrm1 (ENSXETG00000037602) #24 dpf2 (ENSXETG00000041314) taldo1 (ENSXETG00000001671) ENSXETG00000036077 naaladl1 (ENSXETG00000030740) ENSXETG00000045592 snx15 (ENSXETG00000045742) arl2 (ENSXETG00000046568) ENSXETG00000001662 ENSXETG00000036353 majin (ENSXETG00000035747) gpha2 (ENSXETG00000036545) ppp2r5b (ENSXETG00000001650) ENSXETG00000001646 #22 Leishan spiny toad MODERN SPECIES 1 ENSLLEG00000030471 ENSLLEG00000030462 ENSLLEG00000030455 #22 ENSLLEG00000030446 #22 ENSLLEG00000030422 #22 ATG2A (ENSLLEG00000030367) ENSLLEG00000030351 ENSLLEG00000030347 ENSLLEG00000030341 ENSLLEG00000030330 ENSLLEG00000030324 ENSLLEG00000030317 ENSLLEG00000030309 #20 ENSLLEG00000030300 ENSLLEG00000030287 ENSLLEG00000030281 ##22 ENSLLEG00000030270 ENSLLEG00000030255 ##22 CHRM1 (ENSLLEG00000030251) #24 DPF2 (ENSLLEG00000030191) CDC42EP2 (ENSLLEG00000030167) ENSLLEG00000030157 ENSLLEG00000030153 ENSLLEG00000030096 ENSLLEG00000028827 ##22 ENSLLEG00000024059 ##22 ENSLLEG00000021794 ##22 CAPN1 (ENSLLEG00000021343) SPDYC (ENSLLEG00000021138) SYVN1 (ENSLLEG00000029889) ENSLLEG00000029848 Anura ANCESTRAL SPECIES ENSGT00940000154901.C.a.b.b ##22 Leishan spiny toad MODERN SPECIES 1 ENSLLEG00000030455 #22 ENSLLEG00000030446 #22 ENSLLEG00000030422 #22 ATG2A (ENSLLEG00000030367) ENSLLEG00000030351 ENSLLEG00000030347 ENSLLEG00000030341 ENSLLEG00000030330 ENSLLEG00000030324 ENSLLEG00000030317 ENSLLEG00000030309 #20 ENSLLEG00000030300 ENSLLEG00000030287 ENSLLEG00000030281 ##22 ENSLLEG00000030270 ENSLLEG00000030255 ##22 CHRM1 (ENSLLEG00000030251) #24 DPF2 (ENSLLEG00000030191) CDC42EP2 (ENSLLEG00000030167) ENSLLEG00000030157 ENSLLEG00000030153 ENSLLEG00000030096 ENSLLEG00000028827 ##22 ENSLLEG00000024059 ##22 ENSLLEG00000021794 ##22 CAPN1 (ENSLLEG00000021343) SPDYC (ENSLLEG00000021138) SYVN1 (ENSLLEG00000029889) ENSLLEG00000029848 MRPL49 (ENSLLEG00000029792) ENSLLEG00000029779 Elephant shark MODERN SPECIES 2044 ENSCMIG00000007886 slc22a6l (ENSCMIG00000007893) #22 MRPL49 (ENSCMIG00000007904) vps51 (ENSCMIG00000007906) ZFPL1 (ENSCMIG00000007909) ENSCMIG00000007912