Amniota DUPLICATION Amniota ANCESTRAL SPECIES ENSGT00940000154901.C.b.e #22 Mammalia ANCESTRAL SPECIES ENSGT00940000154901.C.b.e #22 Theria ANCESTRAL SPECIES 8 ENSGT00940000159375 ENSGT00940000161450 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00940000156048.a.a ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162660.b.e.b ENSGT00940000161499 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539 #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00950000183059.a ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Eutheria ANCESTRAL SPECIES 3 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162660.b.e.b ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 ENSGT00390000011639 Boreoeutheria ANCESTRAL SPECIES 1 ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Euarchontoglires ANCESTRAL SPECIES 1 ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Glires ANCESTRAL SPECIES 1 ENSGT00940000161450 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Rodentia ANCESTRAL SPECIES 1 ENSGT00940000161450 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Rodentia_B ANCESTRAL SPECIES 5 ENSGT00940000161450 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Myomorpha ANCESTRAL SPECIES 4 ENSGT00940000161450 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Muroidea ANCESTRAL SPECIES 2 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.c #21 ENSGT00940000161239.d ##21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Upper Galilee mountains blind mole rat MODERN SPECIES 993 ENSNGAG00000006190 #21 Slc22a8 (ENSNGAG00000017037) #22 Slc22a6 (ENSNGAG00000017578) #23 Chrm1 (ENSNGAG00000002773) #24 ENSNGAG00000014580 #25 Wdr74 (ENSNGAG00000018778) #26 ENSNGAG00000017211 #27 ENSNGAG00000011098 #28 Nxf1 (ENSNGAG00000001539) #29 Tmem223 (ENSNGAG00000013203) #30 Tmem179b (ENSNGAG00000019915) #31 Taf6l (ENSNGAG00000020944) #32 Polr2g (ENSNGAG00000020624) #33 Zbtb3 (ENSNGAG00000004122) #34 Ttc9c (ENSNGAG00000010773) #35 Hnrnpul2 (ENSNGAG00000012005) #36 Gng3 (ENSNGAG00000017324) #37 Muroidea_A ANCESTRAL SPECIES ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.c.b #21 ENSGT00940000161239.c.a.a #21 ENSGT00940000161239.d ##21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Cricetidae ANCESTRAL SPECIES 1 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.c.b #21 ENSGT00940000161239.d ##21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Cricetinae ANCESTRAL SPECIES 2 ENSGT00940000161450 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.c.b #21 ENSGT00940000161239.d ##21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646.j #25 ENSGT00940000156646.i #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Golden Hamster MODERN SPECIES 617 Cox8a (ENSMAUG00000015109) Naa40 (ENSMAUG00000013206) Rcor2 (ENSMAUG00000013529) ENSMAUG00000013126 ENSMAUG00000015638 ENSMAUG00000014179 Spindoc (ENSMAUG00000013145) Zfta (ENSMAUG00000013334) ENSMAUG00000013612 Atl3 (ENSMAUG00000014736) Plaat3 (ENSMAUG00000013633) Lgals12 (ENSMAUG00000014489) Plaat5 (ENSMAUG00000013292) Slc22a19 (ENSMAUG00000013315) #21 ENSMAUG00000013367 ##21 Slc22a8 (ENSMAUG00000013177) #22 Slc22a6 (ENSMAUG00000013676) #23 Chrm1 (ENSMAUG00000013069) #24 ENSMAUG00000013060 #25 ENSMAUG00000013043 #25 Wdr74 (ENSMAUG00000012992) #26 Tex54 (ENSMAUG00000013004) Stx5a (ENSMAUG00000013701) #28 Nxf1 (ENSMAUG00000014572) #29 Tmem223 (ENSMAUG00000012961) #30 Tmem179b (ENSMAUG00000012885) #31 Taf6l (ENSMAUG00000015095) #32 Polr2g (ENSMAUG00000013079) #33 Zbtb3 (ENSMAUG00000013055) #34 Ttc9c (ENSMAUG00000013136) #35 Hnrnpul2 (ENSMAUG00000013163) #36 Chinese hamster chok1gshd MODERN SPECIES 401 Otub1 (ENSCGRG00001012395) Cox8a (ENSCGRG00001024928) ENSCGRG00001004057 Rcor2 (ENSCGRG00001008621) Mark2 (ENSCGRG00001010551) Spindoc (ENSCGRG00001001090) Zfta (ENSCGRG00001004358) Rtn3 (ENSCGRG00001018871) Atl3 (ENSCGRG00001018013) Plaat3 (ENSCGRG00001007573) Lgals12 (ENSCGRG00001010564) Plaat5 (ENSCGRG00001019087) Slc22a19 (ENSCGRG00001022436) #21 ENSCGRG00001021584 ENSCGRG00001003608 ##21 Slc22a8 (ENSCGRG00001007311) #22 Slc22a6 (ENSCGRG00001015989) #23 Chrm1 (ENSCGRG00001002011) #24 Slc3a2 (ENSCGRG00001025072) #25 Wdr74 (ENSCGRG00001004246) #26 Tex54 (ENSCGRG00001012530) Stx5a (ENSCGRG00001018343) #28 Nxf1 (ENSCGRG00001013721) #29 Tmem223 (ENSCGRG00001023350) #30 Tmem179b (ENSCGRG00001025014) #31 Taf6l (ENSCGRG00001007467) #32 ENSCGRG00001022692 #33 Zbtb3 (ENSCGRG00001006797) #34 Ttc9c (ENSCGRG00001011015) #35 Hnrnpul2 (ENSCGRG00001017076) #36 Gng3 (ENSCGRG00001014012) #37 Cricetidae_B ANCESTRAL SPECIES 1 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.c.b #21 ENSGT00940000161239.d ##21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Prairie vole MODERN SPECIES 16 Cox8a (ENSMOCG00000002916) Naa40 (ENSMOCG00000014326) Rcor2 (ENSMOCG00000001766) Mark2 (ENSMOCG00000015697) Spindoc (ENSMOCG00000016927) ENSMOCG00000016523 ENSMOCG00000001558 Atl3 (ENSMOCG00000014305) Plaat3 (ENSMOCG00000016945) Lgals12 (ENSMOCG00000019635) Plaat5 (ENSMOCG00000016896) Slc22a19 (ENSMOCG00000020438) #21 ENSMOCG00000001921 ENSMOCG00000019218 ##21 ENSMOCG00000002914 ##21 Slc22a8 (ENSMOCG00000011371) #22 Slc22a6 (ENSMOCG00000021104) #23 Chrm1 (ENSMOCG00000002497) #24 ENSMOCG00000009004 #25 ENSMOCG00000003857 #26 Tex54 (ENSMOCG00000020857) Stx5a (ENSMOCG00000021699) #28 Nxf1 (ENSMOCG00000000939) #29 Tmem223 (ENSMOCG00000010044) #30 Tmem179b (ENSMOCG00000012843) #31 Taf6l (ENSMOCG00000019616) #32 Polr2g (ENSMOCG00000010638) #33 Zbtb3 (ENSMOCG00000002963) #34 Ttc9c (ENSMOCG00000019481) #35 Hnrnpul2 (ENSMOCG00000020000) #36 Gng3 (ENSMOCG00000020628) #37 Northern American deer mouse MODERN SPECIES Rcor2 (ENSPEMG00000018762) Mark2 (ENSPEMG00000004482) Spindoc (ENSPEMG00000005634) Zfta (ENSPEMG00000015536) ENSPEMG00000006921 Atl3 (ENSPEMG00000017714) Plaat3 (ENSPEMG00000015751) Lgals12 (ENSPEMG00000002696) Plaat5 (ENSPEMG00000007949) ENSPEMG00000030267 #21 Slc22a19 (ENSPEMG00000011237) #21 ENSPEMG00000025385 #21 ENSPEMG00000017469 #21 ENSPEMG00000025227 #21 ENSPEMG00000008490 ##21 Slc22a8 (ENSPEMG00000005685) #22 Slc22a6 (ENSPEMG00000010064) #23 ENSPEMG00000024846 Chrm1 (ENSPEMG00000027279) #24 Slc3a2 (ENSPEMG00000017251) #25 Wdr74 (ENSPEMG00000008678) #26 Tex54 (ENSPEMG00000012036) Stx5a (ENSPEMG00000017791) #28 Nxf1 (ENSPEMG00000006139) #29 Tmem223 (ENSPEMG00000017084) #30 Tmem179b (ENSPEMG00000011859) #31 Taf6l (ENSPEMG00000011799) #32 Polr2g (ENSPEMG00000000685) #33 Zbtb3 (ENSPEMG00000018613) #34 Ttc9c (ENSPEMG00000026108) #35 Hnrnpul2 (ENSPEMG00000015546) #36 Murinae ANCESTRAL SPECIES ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.c.b #21 ENSGT00940000161239.d ##21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 Mus ANCESTRAL SPECIES ENSGT00940000161450 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.c.b #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 Mus_A ANCESTRAL SPECIES 16 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.c.b #21 ENSGT00940000161239.d ##21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 Mus_B ANCESTRAL SPECIES 16 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.c.b #21 ENSGT00940000161239.c.a.a #21 ENSGT00940000161239.d ##21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 Mouse MODERN SPECIES 10 Rcor2 (ENSMUSG00000024968) Mark2 (ENSMUSG00000024969) Spindoc (ENSMUSG00000024970) Zfta (ENSMUSG00000053080) Rtn3 (ENSMUSG00000024758) Atl3 (ENSMUSG00000024759) Plaat3 (ENSMUSG00000060675) Lgals12 (ENSMUSG00000024972) Plaat5 (ENSMUSG00000024973) Slc22a19 (ENSMUSG00000024757) #21 Slc22a26 (ENSMUSG00000053303) #21 Slc22a27 (ENSMUSG00000067656) #21 Slc22a28 (ENSMUSG00000063590) #21 Slc22a29 (ENSMUSG00000075044) #21 Slc22a30 (ENSMUSG00000052562) #21 Slc22a8 (ENSMUSG00000063796) #22 Slc22a6 (ENSMUSG00000024650) #23 Chrm1 (ENSMUSG00000032773) #24 Slc3a2 (ENSMUSG00000010095) #25 Wdr74 (ENSMUSG00000042729) #26 Tex54 (ENSMUSG00000090840) Stx5a (ENSMUSG00000010110) #28 Nxf1 (ENSMUSG00000010097) #29 Tmem223 (ENSMUSG00000117924) #30 Tmem179b (ENSMUSG00000118346) #31 Taf6l (ENSMUSG00000003680) #32 Polr2g (ENSMUSG00000071662) #33 Zbtb3 (ENSMUSG00000071661) #34 Ttc9c (ENSMUSG00000071660) #35 Hnrnpul2 (ENSMUSG00000071659) #36 Gng3 (ENSMUSG00000071658) #37 Mus_C ANCESTRAL SPECIES 25 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.c.b #21 ENSGT00940000161239.c.a.a #21 ENSGT00940000161239.d ##21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 spretus MODERN SPECIES 10 Flrt1 (MGP_SPRETEiJ_G0023541) Otub1 (MGP_SPRETEiJ_G0023542) Cox8a (MGP_SPRETEiJ_G0023543) Naa40 (MGP_SPRETEiJ_G0023544) Rcor2 (MGP_SPRETEiJ_G0023545) Mark2 (MGP_SPRETEiJ_G0023546) Spindoc (MGP_SPRETEiJ_G0023547) Zfta (MGP_SPRETEiJ_G0023548) Rtn3 (MGP_SPRETEiJ_G0023549) Atl3 (MGP_SPRETEiJ_G0023550) Plaat3 (MGP_SPRETEiJ_G0023551) Lgals12 (MGP_SPRETEiJ_G0023552) MGP_SPRETEiJ_G0023553 Slc22a19 (MGP_SPRETEiJ_G0023554) #21 MGP_SPRETEiJ_G0023555 #21 Slc22a8 (MGP_SPRETEiJ_G0023557) #22 Slc22a6 (MGP_SPRETEiJ_G0023558) #23 Chrm1 (MGP_SPRETEiJ_G0023559) #24 Slc3a2 (MGP_SPRETEiJ_G0023560) #25 Wdr74 (MGP_SPRETEiJ_G0023561) #26 Tex54 (MGP_SPRETEiJ_G0023562) Stx5a (MGP_SPRETEiJ_G0023563) #28 Taf6l (MGP_SPRETEiJ_G0023565) #32 Polr2g (MGP_SPRETEiJ_G0023566) #33 Zbtb3 (MGP_SPRETEiJ_G0023567) #34 Ttc9c (MGP_SPRETEiJ_G0023568) #35 Hnrnpul2 (MGP_SPRETEiJ_G0023569) #36 Gng3 (MGP_SPRETEiJ_G0023570) #37 Bscl2 (MGP_SPRETEiJ_G0023571) Lrrn4cl (MGP_SPRETEiJ_G0023572) Ubxn1 (MGP_SPRETEiJ_G0023573) Steppe mouse MODERN SPECIES 2426 ENSMSIG00000031185 ##21 Slc22a8 (ENSMSIG00000031186) #22 Slc22a6 (ENSMSIG00000031188) #23 Chrm1 (ENSMSIG00000031191) #24 Slc3a2 (ENSMSIG00000031194) #25 Wdr74 (ENSMSIG00000031207) #26 Tex54 (ENSMSIG00000031210) ENSMSIG00000031211 #28 Nxf1 (ENSMSIG00000031212) #29 Tmem223 (ENSMSIG00000031214) #30 Tmem179b (ENSMSIG00000031215) #31 Taf6l (ENSMSIG00000031216) #32 Polr2g (ENSMSIG00000031217) #33 Zbtb3 (ENSMSIG00000031218) #34 Ttc9c (ENSMSIG00000031219) #35 Hnrnpul2 (ENSMSIG00000031220) #36 Gng3 (ENSMSIG00000031221) #37 Ryukyu mouse MODERN SPECIES 10 Stip1 (MGP_CAROLIEiJ_G0022629) Macrod1 (MGP_CAROLIEiJ_G0022630) Flrt1 (MGP_CAROLIEiJ_G0022631) MGP_CAROLIEiJ_G0022632 Cox8a (MGP_CAROLIEiJ_G0022633) Naa40 (MGP_CAROLIEiJ_G0022634) Rcor2 (MGP_CAROLIEiJ_G0022635) Mark2 (MGP_CAROLIEiJ_G0022636) Spindoc (MGP_CAROLIEiJ_G0022637) Zfta (MGP_CAROLIEiJ_G0022638) Rtn3 (MGP_CAROLIEiJ_G0022639) Atl3 (MGP_CAROLIEiJ_G0022640) Plaat3 (MGP_CAROLIEiJ_G0022641) Lgals12 (MGP_CAROLIEiJ_G0022642) MGP_CAROLIEiJ_G0022643 Slc22a8 (MGP_CAROLIEiJ_G0022644) #22 Slc22a6 (MGP_CAROLIEiJ_G0022645) #23 Chrm1 (MGP_CAROLIEiJ_G0022646) #24 Slc3a2 (MGP_CAROLIEiJ_G0022647) #25 Wdr74 (MGP_CAROLIEiJ_G0022648) #26 Tex54 (MGP_CAROLIEiJ_G0022649) Stx5a (MGP_CAROLIEiJ_G0022650) #28 Nxf1 (MGP_CAROLIEiJ_G0022651) #29 Tmem179b (MGP_CAROLIEiJ_G0022652) #31 Polr2g (MGP_CAROLIEiJ_G0022653) #33 Zbtb3 (MGP_CAROLIEiJ_G0022654) #34 Ttc9c (MGP_CAROLIEiJ_G0022655) #35 Hnrnpul2 (MGP_CAROLIEiJ_G0022656) #36 Gng3 (MGP_CAROLIEiJ_G0022657) #37 Bscl2 (MGP_CAROLIEiJ_G0022658) Lrrn4cl (MGP_CAROLIEiJ_G0022659) Shrew mouse MODERN SPECIES Macrod1 (MGP_PahariEiJ_G0014124) Flrt1 (MGP_PahariEiJ_G0014125) Otub1 (MGP_PahariEiJ_G0014126) Cox8a (MGP_PahariEiJ_G0014127) Naa40 (MGP_PahariEiJ_G0014128) Rcor2 (MGP_PahariEiJ_G0014129) Mark2 (MGP_PahariEiJ_G0014130) Spindoc (MGP_PahariEiJ_G0014131) Zfta (MGP_PahariEiJ_G0014132) Rtn3 (MGP_PahariEiJ_G0014133) Atl3 (MGP_PahariEiJ_G0014134) Plaat3 (MGP_PahariEiJ_G0014135) Lgals12 (MGP_PahariEiJ_G0014136) MGP_PahariEiJ_G0014137 MGP_PahariEiJ_G0014138 ##21 Slc22a8 (MGP_PahariEiJ_G0014139) #22 Slc22a6 (MGP_PahariEiJ_G0014140) #23 Chrm1 (MGP_PahariEiJ_G0014141) #24 Slc3a2 (MGP_PahariEiJ_G0014142) #25 Wdr74 (MGP_PahariEiJ_G0014143) #26 Tex54 (MGP_PahariEiJ_G0014144) MGP_PahariEiJ_G0014145 #28 Nxf1 (MGP_PahariEiJ_G0014146) #29 Taf6l (MGP_PahariEiJ_G0014147) #32 Polr2g (MGP_PahariEiJ_G0014148) #33 Zbtb3 (MGP_PahariEiJ_G0014149) #34 Ttc9c (MGP_PahariEiJ_G0014150) #35 Hnrnpul2 (MGP_PahariEiJ_G0014151) #36 Gng3 (MGP_PahariEiJ_G0014152) #37 Bscl2 (MGP_PahariEiJ_G0014153) Lrrn4cl (MGP_PahariEiJ_G0014154) Rat MODERN SPECIES Rcor2 (ENSRNOG00000060849) Mark2 (ENSRNOG00000021184) Spindoc (ENSRNOG00000025061) Zfta (ENSRNOG00000032042) Rtn3 (ENSRNOG00000021202) Atl3 (ENSRNOG00000021203) ENSRNOG00000066743 Plaat3 (ENSRNOG00000021206) Lgals12 (ENSRNOG00000021207) Plaat5 (ENSRNOG00000023528) Slc22a24 (ENSRNOG00000056396) #21 Dnajb6-ps10 (ENSRNOG00000017884) UST4r (ENSRNOG00000049826) #21 Ust5r (ENSRNOG00000061890) #21 Slc22a25 (ENSRNOG00000017964) ##21 Slc22a8 (ENSRNOG00000018086) #22 Slc22a6 (ENSRNOG00000018215) #23 Chrm1 (ENSRNOG00000018385) #24 Slc3a2 (ENSRNOG00000018487) #25 LOC690251 (ENSRNOG00000029315) Wdr74 (ENSRNOG00000042878) #26 LOC120099984 (ENSRNOG00000063481) Stx5 (ENSRNOG00000018847) #28 Nxf1 (ENSRNOG00000019069) #29 Tmem223 (ENSRNOG00000019266) #30 Tmem179b (ENSRNOG00000019341) #31 Taf6l (ENSRNOG00000019419) #32 Zbtb3 (ENSRNOG00000019461) #34 Polr2g (ENSRNOG00000019439) #33 Ttc9c (ENSRNOG00000019464) #35 Hnrnpul2 (ENSRNOG00000019507) Lesser Egyptian jerboa MODERN SPECIES 60 Macrod1 (ENSJJAG00000010697) Otub1 (ENSJJAG00000017403) Cox8a (ENSJJAG00000022271) Naa40 (ENSJJAG00000010926) Rcor2 (ENSJJAG00000000799) Mark2 (ENSJJAG00000018612) Spindoc (ENSJJAG00000014147) Zfta (ENSJJAG00000019968) ENSJJAG00000016262 ENSJJAG00000006253 ENSJJAG00000017667 Plaat3 (ENSJJAG00000021915) Lgals12 (ENSJJAG00000014881) Plaat5 (ENSJJAG00000020253) ENSJJAG00000010614 #21 Slc22a8 (ENSJJAG00000023072) #22 Slc22a6 (ENSJJAG00000009093) #23 Chrm1 (ENSJJAG00000013856) #24 ENSJJAG00000001125 #25 Wdr74 (ENSJJAG00000001449) #26 Stx5a (ENSJJAG00000023191) #28 Nxf1 (ENSJJAG00000017480) #29 Tmem223 (ENSJJAG00000020948) #30 Tmem179b (ENSJJAG00000010561) #31 Taf6l (ENSJJAG00000017255) #32 ENSJJAG00000009540 Polr2g (ENSJJAG00000005019) #33 Zbtb3 (ENSJJAG00000024243) #34 ENSJJAG00000008957 #35 Hnrnpul2 (ENSJJAG00000011206) #36 Gng3 (ENSJJAG00000015400) #37 Kangaroo rat MODERN SPECIES 436 Slc22a8 (ENSDORG00000014299) #22 Slc22a6 (ENSDORG00000008272) #23 Chrm1 (ENSDORG00000014333) #24 ENSDORG00000010523 #25 ENSDORG00000023609 #25 Wdr74 (ENSDORG00000030180) #26 ENSDORG00000026362 ENSDORG00000025630 Nxf1 (ENSDORG00000015692) #29 Tmem223 (ENSDORG00000015693) #30 ENSDORG00000029410 #31 ENSDORG00000015695 #32 ENSDORG00000015696 #33 Zbtb3 (ENSDORG00000015697) #34 Ttc9c (ENSDORG00000028105) #35 Hnrnpul2 (ENSDORG00000008678) #36 Rodentia_A ANCESTRAL SPECIES 1 ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000164763 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Sciuridae ANCESTRAL SPECIES 40 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000164763 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Marmotini ANCESTRAL SPECIES 6 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c.d.b.b ENSGT00940000154853.c.c.a ENSGT00940000162878 ENSGT00940000154853.c.d.b.a.a ENSGT00940000162436 ENSGT00940000164763.e ENSGT00940000164763.f ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Marmotini_b ANCESTRAL SPECIES 21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 Squirrel MODERN SPECIES 181 SLC22A8 (ENSSTOG00000007893) #22 SLC22A6 (ENSSTOG00000007863) #23 CHRM1 (ENSSTOG00000004514) #24 ENSSTOG00000004495 #25 WDR74 (ENSSTOG00000028814) #26 ENSSTOG00000031064 STX5 (ENSSTOG00000004487) #28 NXF1 (ENSSTOG00000004463) #29 TMEM179B (ENSSTOG00000004436) #31 TMEM223 (ENSSTOG00000004451) #30 TAF6L (ENSSTOG00000004406) #32 POLR2G (ENSSTOG00000004391) #33 ZBTB3 (ENSSTOG00000027839) #34 TTC9C (ENSSTOG00000004352) #35 HNRNPUL2 (ENSSTOG00000004327) #36 GNG3 (ENSSTOG00000001052) #37 Arctic ground squirrel MODERN SPECIES 366 SLC22A8 (ENSUPAG00010005520) #22 SLC22A6 (ENSUPAG00010005504) #23 CHRM1 (ENSUPAG00010005493) #24 SLC3A2 (ENSUPAG00010005472) #25 WDR74 (ENSUPAG00010005413) #26 ENSUPAG00010005405 NXF1 (ENSUPAG00010005335) #29 TMEM223 (ENSUPAG00010005332) #30 TMEM179B (ENSUPAG00010005330) #31 TAF6L (ENSUPAG00010005260) #32 ENSUPAG00010005242 #33 ZBTB3 (ENSUPAG00010005239) #34 TTC9C (ENSUPAG00010005227) #35 HNRNPUL2 (ENSUPAG00010005211) #36 GNG3 (ENSUPAG00010005209) #37 BSCL2 (ENSUPAG00010005172) Alpin marmot MODERN SPECIES 3 ENSMMMG00000006663 ENSMMMG00000006652 ENSMMMG00000006645 ENSMMMG00000006639 PLAAT5 (ENSMMMG00000006630) ENSMMMG00000005778 ENSMMMG00000005768 #21 ENSMMMG00000004981 ENSMMMG00000004930 #21 ENSMMMG00000004924 ENSMMMG00000004907 #21 ENSMMMG00000004851 #21 ENSMMMG00000003825 ENSMMMG00000003776 ENSMMMG00000003769 #21 SLC22A8 (ENSMMMG00000003731) #22 SLC22A6 (ENSMMMG00000003706) #23 ENSMMMG00000003700 CHRM1 (ENSMMMG00000003694) #24 SLC3A2 (ENSMMMG00000003678) #25 WDR74 (ENSMMMG00000003523) #26 STX5 (ENSMMMG00000003474) #28 NXF1 (ENSMMMG00000003452) #29 TMEM223 (ENSMMMG00000003447) #30 TMEM179B (ENSMMMG00000003438) #31 TAF6L (ENSMMMG00000003387) #32 POLR2G (ENSMMMG00000003372) #33 ZBTB3 (ENSMMMG00000003369) #34 TTC9C (ENSMMMG00000003362) #35 HNRNPUL2 (ENSMMMG00000002784) #36 GNG3 (ENSMMMG00000002755) #37 Eurasian red squirrel MODERN SPECIES 2 ENSSVLG00005022993 #21 ENSSVLG00005023561 #21 ENSSVLG00005023580 #21 ENSSVLG00005023641 #21 ENSSVLG00005023714 ENSSVLG00005023731 ENSSVLG00005023766 #21 ENSSVLG00005023808 ENSSVLG00005023863 #21 ENSSVLG00005024051 #21 ENSSVLG00005024076 ENSSVLG00005024264 #21 SLC22A24 (ENSSVLG00005024838) ENSSVLG00005024877 ENSSVLG00005024903 SLC22A8 (ENSSVLG00005024944) #22 SLC22A6 (ENSSVLG00005024995) #23 ENSSVLG00005025007 CHRM1 (ENSSVLG00005025022) #24 SLC3A2 (ENSSVLG00005025047) #25 WDR74 (ENSSVLG00005004863) #26 STX5 (ENSSVLG00005004935) #28 NXF1 (ENSSVLG00005004975) #29 TMEM223 (ENSSVLG00005005000) #30 TMEM179B (ENSSVLG00005005020) #31 TAF6L (ENSSVLG00005005050) #32 POLR2G (ENSSVLG00005005070) #33 ZBTB3 (ENSSVLG00005005114) #34 TTC9C (ENSSVLG00005005141) #35 HNRNPUL2 (ENSSVLG00005005186) #36 BSCL2 (ENSSVLG00005005272) Hystricomorpha ANCESTRAL SPECIES 37 ENSGT00940000162436 ENSGT00940000161499 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 ENSGT00390000011639 Hystricomorpha_a ANCESTRAL SPECIES 44 ENSGT00940000161499 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 ENSGT00390000011639 Guinea pig MODERN SPECIES 44 ENSCPOG00000034332 ENSCPOG00000035995 ENSCPOG00000035220 ENSCPOG00000034087 ENSCPOG00000038081 ENSCPOG00000040732 ENSCPOG00000030540 ENSCPOG00000024812 OR5AS1 (ENSCPOG00000002762) ENSCPOG00000035549 ENSCPOG00000024576 ENSCPOG00000003501 ENSCPOG00000031316 ENSCPOG00000021873 LGALS12 (ENSCPOG00000001729) SLC22A8 (ENSCPOG00000007880) #22 SLC22A6 (ENSCPOG00000015195) #23 CHRM1 (ENSCPOG00000000307) #24 SLC3A2 (ENSCPOG00000013152) #25 WDR74 (ENSCPOG00000008305) #26 STX5 (ENSCPOG00000030304) #28 NXF1 (ENSCPOG00000006126) #29 TMEM223 (ENSCPOG00000006124) #30 TMEM179B (ENSCPOG00000006121) #31 TAF6L (ENSCPOG00000002702) #32 POLR2G (ENSCPOG00000036420) #33 ZBTB3 (ENSCPOG00000011665) #34 TTC9C (ENSCPOG00000031200) #35 ENSCPOG00000000739 GNG3 (ENSCPOG00000040497) #37 LRRN4CL (ENSCPOG00000036188) Hystricomorpha_b ANCESTRAL SPECIES 80 ENSGT00940000161499 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 ENSGT00390000011639 Long-tailed chinchilla MODERN SPECIES 306 LGALS12 (ENSCLAG00000000294) SLC22A8 (ENSCLAG00000000390) #22 SLC22A6 (ENSCLAG00000001057) #23 CHRM1 (ENSCLAG00000000446) #24 SLC3A2 (ENSCLAG00000000468) #25 WDR74 (ENSCLAG00000000627) #26 STX5 (ENSCLAG00000000665) #28 NXF1 (ENSCLAG00000001490) #29 TMEM223 (ENSCLAG00000000343) #30 TMEM179B (ENSCLAG00000000362) #31 TAF6L (ENSCLAG00000000112) #32 POLR2G (ENSCLAG00000000802) #33 ZBTB3 (ENSCLAG00000000861) #34 TTC9C (ENSCLAG00000000902) #35 HNRNPUL2 (ENSCLAG00000000417) #36 LRRN4CL (ENSCLAG00000000228) GNG3 (ENSCLAG00000000268) #37 Degu MODERN SPECIES 320 ENSODEG00000002375 ENSODEG00000002413 LGALS12 (ENSODEG00000002489) SLC22A8 (ENSODEG00000002518) #22 SLC22A6 (ENSODEG00000002780) #23 CHRM1 (ENSODEG00000018978) #24 SLC3A2 (ENSODEG00000003055) #25 WDR74 (ENSODEG00000003132) #26 STX5 (ENSODEG00000003162) #28 NXF1 (ENSODEG00000001620) #29 TMEM223 (ENSODEG00000001739) #30 TAF6L (ENSODEG00000001781) #32 ENSODEG00000018748 ENSODEG00000002048 #33 HNRNPUL2 (ENSODEG00000002142) #36 TTC9C (ENSODEG00000002308) #35 GNG3 (ENSODEG00000002315) #37 UBXN1 (ENSODEG00000002987) UQCC3 (ENSODEG00000003020) Naked mole-rat female MODERN SPECIES 14 ENSHGLG00000011456 SLC39A13 (ENSHGLG00000041087) PSMC3 (ENSHGLG00000005713) RAPSN (ENSHGLG00000008521) ENSHGLG00000006909 ENSHGLG00000037048 KBTBD4 (ENSHGLG00000047234) NDUFS3 (ENSHGLG00000018368) FAM180B (ENSHGLG00000038229) MTCH2 (ENSHGLG00000017536) ENSHGLG00000043784 ENSHGLG00000008506 ENSHGLG00000039374 ENSHGLG00000041936 ENSHGLG00000003580 ENSHGLG00000003320 #22 SLC22A6 (ENSHGLG00000003133) #23 CHRM1 (ENSHGLG00000040030) #24 SLC3A2 (ENSHGLG00000004557) #25 WDR74 (ENSHGLG00000003751) #26 STX5 (ENSHGLG00000003553) #28 NXF1 (ENSHGLG00000002936) #29 TMEM223 (ENSHGLG00000034690) #30 TAF6L (ENSHGLG00000005590) #32 POLR2G (ENSHGLG00000004851) #33 ZBTB3 (ENSHGLG00000032180) #34 ENSHGLG00000038212 HNRNPUL2 (ENSHGLG00000003285) #36 GNG3 (ENSHGLG00000038630) #37 BSCL2 (ENSHGLG00000002887) ENSHGLG00000038756 Lagomorpha ANCESTRAL SPECIES 161 ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00940000175551 ENSGT00980000200147 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.b #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000156646 #25 ENSGT00390000015119 #26 Pika MODERN SPECIES 4431 ENSOPRG00000011712 #22 ENSOPRG00000011693 #23 Primates ANCESTRAL SPECIES ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Haplorrhini ANCESTRAL SPECIES ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Simiiformes ANCESTRAL SPECIES ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00910000147729 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Catarrhini ANCESTRAL SPECIES 1 ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00550000075025.`b.b.b ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00910000147729 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Hominoidea ANCESTRAL SPECIES 1 ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00550000075025.`b.b.b ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00910000147729 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Hominidae ANCESTRAL SPECIES 1 ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00550000075025.`b.b.b ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00910000147729 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 8 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d.b ENSGT00940000157482.d.a ENSGT00550000075025.`b.b.b ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00910000147729 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d.a ENSGT00550000075025.`b.b.b ENSGT00940000157482.d.b ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00910000147729 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Pan ANCESTRAL SPECIES 1 ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d.a ENSGT00550000075025.`b.b.b ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00910000147729 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Chimpanzee MODERN SPECIES 2 MARK2 (ENSPTRG00000043914) SPINDOC (ENSPTRG00000003812) ZFTA (ENSPTRG00000045157) RTN3 (ENSPTRG00000003809) ENSPTRG00000043962 ATL3 (ENSPTRG00000003807) PLAAT3 (ENSPTRG00000003806) PLAAT2 (ENSPTRG00000003805) PLAAT4 (ENSPTRG00000003804) LGALS12 (ENSPTRG00000003803) PLAAT5 (ENSPTRG00000003801) SLC22A9 (ENSPTRG00000003800) #21 SLC22A10 (ENSPTRG00000003799) SLC22A25 (ENSPTRG00000024251) SLC22A24 (ENSPTRG00000003797) SLC22A8 (ENSPTRG00000003796) #22 SLC22A6 (ENSPTRG00000023694) #23 ENSPTRG00000046841 CHRM1 (ENSPTRG00000003795) #24 SLC3A2 (ENSPTRG00000003794) #25 WDR74 (ENSPTRG00000047249) #26 STX5 (ENSPTRG00000003792) #28 ENSPTRG00000051335 NXF1 (ENSPTRG00000003791) #29 TMEM223 (ENSPTRG00000003790) #30 TMEM179B (ENSPTRG00000003789) #31 TAF6L (ENSPTRG00000003787) #32 ENSPTRG00000050327 ZBTB3 (ENSPTRG00000003785) #34 TTC9C (ENSPTRG00000023824) #35 HNRNPUL2 (ENSPTRG00000034359) #36 Bonobo MODERN SPECIES 2 MARK2 (ENSPPAG00000032968) SPINDOC (ENSPPAG00000031069) RTN3 (ENSPPAG00000030987) ENSPPAG00000043354 ATL3 (ENSPPAG00000000239) PLAAT3 (ENSPPAG00000038739) PLAAT2 (ENSPPAG00000034354) PLAAT4 (ENSPPAG00000033745) LGALS12 (ENSPPAG00000042349) PLAAT5 (ENSPPAG00000040450) SLC22A9 (ENSPPAG00000029821) #21 SLC22A10 (ENSPPAG00000040455) SLC22A25 (ENSPPAG00000039130) ENSPPAG00000042818 SLC22A24 (ENSPPAG00000035098) SLC22A8 (ENSPPAG00000041453) #22 SLC22A6 (ENSPPAG00000035836) #23 ENSPPAG00000024710 CHRM1 (ENSPPAG00000018668) #24 SLC3A2 (ENSPPAG00000020658) #25 WDR74 (ENSPPAG00000036028) #26 TEX54 (ENSPPAG00000012450) STX5 (ENSPPAG00000039956) #28 NXF1 (ENSPPAG00000041498) #29 TMEM179B (ENSPPAG00000038907) #31 TMEM223 (ENSPPAG00000035801) #30 TAF6L (ENSPPAG00000009707) #32 POLR2G (ENSPPAG00000039868) #33 ZBTB3 (ENSPPAG00000031673) #34 TTC9C (ENSPPAG00000030010) #35 ENSPPAG00000041471 Human MODERN SPECIES 2 RCOR2 (ENSG00000167771) MARK2 (ENSG00000072518) SPINDOC (ENSG00000168005) ZFTA (ENSG00000188070) RTN3 (ENSG00000133318) ATL3 (ENSG00000184743) PLAAT3 (ENSG00000176485) PLAAT2 (ENSG00000133328) PLAAT4 (ENSG00000133321) LGALS12 (ENSG00000133317) PLAAT5 (ENSG00000168004) SLC22A9 (ENSG00000149742) #21 SLC22A10 (ENSG00000184999) SLC22A25 (ENSG00000196600) SLC22A24 (ENSG00000197658) SLC22A8 (ENSG00000149452) #22 SLC22A6 (ENSG00000197901) #23 CHRM1 (ENSG00000168539) #24 SLC3A2 (ENSG00000168003) #25 WDR74 (ENSG00000133316) #26 TEX54 (ENSG00000283268) STX5 (ENSG00000162236) #28 NXF1 (ENSG00000162231) #29 TMEM179B (ENSG00000185475) #31 TMEM223 (ENSG00000168569) #30 TAF6L (ENSG00000162227) #32 POLR2G (ENSG00000168002) #33 ZBTB3 (ENSG00000185670) #34 TTC9C (ENSG00000162222) #35 HNRNPUL2 (ENSG00000214753) #36 GNG3 (ENSG00000162188) #37 Gorilla MODERN SPECIES 2 SPINDOC (ENSGGOG00000010130) ZFTA (ENSGGOG00000006043) RTN3 (ENSGGOG00000009872) ENSGGOG00000037187 ATL3 (ENSGGOG00000009860) PLAAT3 (ENSGGOG00000001944) PLAAT2 (ENSGGOG00000000282) PLAAT4 (ENSGGOG00000000281) LGALS12 (ENSGGOG00000000279) PLAAT5 (ENSGGOG00000000970) SLC22A9 (ENSGGOG00000003608) #21 SLC22A10 (ENSGGOG00000014919) CSNK1G2 (ENSGGOG00000007714) SLC22A25 (ENSGGOG00000007793) SLC22A24 (ENSGGOG00000005570) SLC22A8 (ENSGGOG00000003920) #22 SLC22A6 (ENSGGOG00000003915) #23 ENSGGOG00000036955 CHRM1 (ENSGGOG00000016344) #24 SLC3A2 (ENSGGOG00000011233) #25 WDR74 (ENSGGOG00000001923) #26 TEX54 (ENSGGOG00000037357) STX5 (ENSGGOG00000001919) #28 ENSGGOG00000040653 NXF1 (ENSGGOG00000001911) #29 TMEM223 (ENSGGOG00000001910) #30 TMEM179B (ENSGGOG00000001907) #31 TAF6L (ENSGGOG00000011807) #32 POLR2G (ENSGGOG00000011739) #33 ZBTB3 (ENSGGOG00000011735) #34 TTC9C (ENSGGOG00000011733) #35 Orangutan MODERN SPECIES 2 RCOR2 (ENSPPYG00000003124) MARK2 (ENSPPYG00000003125) SPINDOC (ENSPPYG00000003126) ZFTA (ENSPPYG00000003127) RTN3 (ENSPPYG00000003128) ATL3 (ENSPPYG00000003129) PLAAT3 (ENSPPYG00000031710) PLAAT2 (ENSPPYG00000003130) ENSPPYG00000003131 LGALS12 (ENSPPYG00000003132) PLAAT5 (ENSPPYG00000003133) SLC22A9 (ENSPPYG00000003134) #21 SLC22A10 (ENSPPYG00000038210) SLC22A25 (ENSPPYG00000003135) SLC22A24 (ENSPPYG00000003136) SLC22A8 (ENSPPYG00000003137) #22 SLC22A6 (ENSPPYG00000003138) #23 CHRM1 (ENSPPYG00000003139) #24 SLC3A2 (ENSPPYG00000003140) #25 WDR74 (ENSPPYG00000003141) #26 TEX54 (ENSPPYG00000034365) STX5 (ENSPPYG00000003142) #28 NXF1 (ENSPPYG00000003143) #29 TMEM223 (ENSPPYG00000003144) #30 TMEM179B (ENSPPYG00000003145) #31 TAF6L (ENSPPYG00000003146) #32 ENSPPYG00000003147 #33 ZBTB3 (ENSPPYG00000003148) #34 TTC9C (ENSPPYG00000030629) #35 HNRNPUL2 (ENSPPYG00000029773) #36 GNG3 (ENSPPYG00000003150) #37 Gibbon MODERN SPECIES 19 RCOR2 (ENSNLEG00000004721) MARK2 (ENSNLEG00000004656) ENSNLEG00000004652 ZFTA (ENSNLEG00000004648) RTN3 (ENSNLEG00000004594) ENSNLEG00000030866 ENSNLEG00000004565 PLAAT3 (ENSNLEG00000004552) PLAAT2 (ENSNLEG00000004549) ENSNLEG00000035013 LGALS12 (ENSNLEG00000004499) PLAAT5 (ENSNLEG00000004486) SLC22A10 (ENSNLEG00000004483) SLC22A25 (ENSNLEG00000004474) SLC22A24 (ENSNLEG00000034554) SLC22A8 (ENSNLEG00000004442) #22 SLC22A6 (ENSNLEG00000004394) #23 ENSNLEG00000035187 CHRM1 (ENSNLEG00000035083) #24 SLC3A2 (ENSNLEG00000004298) #25 WDR74 (ENSNLEG00000004238) #26 STX5 (ENSNLEG00000004184) #28 ENSNLEG00000035784 ENSNLEG00000004123 #29 TMEM223 (ENSNLEG00000004119) #30 TMEM179B (ENSNLEG00000036102) #31 TAF6L (ENSNLEG00000032645) #32 ENSNLEG00000004097 #33 ZBTB3 (ENSNLEG00000031633) #34 ENSNLEG00000034047 #35 HNRNPUL2 (ENSNLEG00000004077) #36 Cercopithecidae ANCESTRAL SPECIES ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00550000075025.`b.b.b ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00550000075025.`b.b.b ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00550000075025.`b.b.b ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Macaca ANCESTRAL SPECIES 2 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00550000075025.`b.b.b ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Macaca_a ANCESTRAL SPECIES 3 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000163505.a.a.a.b.a.b.b.b.a.a ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00960000190678 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 Rhesus MODERN SPECIES 5 ENSMMUG00000000478 COX8A (ENSMMUG00000053930) NAA40 (ENSMMUG00000018632) ENSMMUG00000052569 RCOR2 (ENSMMUG00000014133) MARK2 (ENSMMUG00000014131) ENSMMUG00000059969 SPINDOC (ENSMMUG00000018152) ZFTA (ENSMMUG00000047347) RTN3 (ENSMMUG00000015876) ATL3 (ENSMMUG00000005776) PLAAT3 (ENSMMUG00000005775) PLAAT4 (ENSMMUG00000045105) LGALS12 (ENSMMUG00000018304) PLAAT5 (ENSMMUG00000018316) SLC22A8 (ENSMMUG00000016225) #22 SLC22A6 (ENSMMUG00000016227) #23 CHRM1 (ENSMMUG00000017292) #24 SLC3A2 (ENSMMUG00000020354) #25 ENSMMUG00000064232 WDR74 (ENSMMUG00000018779) #26 STX5 (ENSMMUG00000005280) #28 NXF1 (ENSMMUG00000000188) #29 TMEM223 (ENSMMUG00000023094) #30 TMEM179B (ENSMMUG00000003682) #31 TAF6L (ENSMMUG00000000110) #32 POLR2G (ENSMMUG00000014368) #33 ZBTB3 (ENSMMUG00000056054) #34 TTC9C (ENSMMUG00000039671) #35 HNRNPUL2 (ENSMMUG00000051635) #36 BSCL2 (ENSMMUG00000014363) Crab-eating macaque MODERN SPECIES 5 OTUB1 (ENSMFAG00000033654) COX8A (ENSMFAG00000001343) NAA40 (ENSMFAG00000034118) RCOR2 (ENSMFAG00000039149) MARK2 (ENSMFAG00000032452) ENSMFAG00000063584 SPINDOC (ENSMFAG00000002160) ENSMFAG00000059182 RTN3 (ENSMFAG00000030265) ATL3 (ENSMFAG00000035680) ENSMFAG00000053940 PLAAT3 (ENSMFAG00000032359) PLAAT4 (ENSMFAG00000035178) LGALS12 (ENSMFAG00000041888) PLAAT5 (ENSMFAG00000039225) SLC22A8 (ENSMFAG00000030409) #22 SLC22A6 (ENSMFAG00000003484) #23 ENSMFAG00000048955 ENSMFAG00000028626 SLC3A2 (ENSMFAG00000032262) #25 ENSMFAG00000055662 WDR74 (ENSMFAG00000034162) #26 STX5 (ENSMFAG00000003488) #28 NXF1 (ENSMFAG00000045399) #29 TMEM223 (ENSMFAG00000030143) #30 TMEM179B (ENSMFAG00000037362) #31 TAF6L (ENSMFAG00000030912) #32 POLR2G (ENSMFAG00000033674) #33 ZBTB3 (ENSMFAG00000003520) #34 TTC9C (ENSMFAG00000036997) #35 HNRNPUL2 (ENSMFAG00000041014) #36 Pig-tailed macaque MODERN SPECIES 433 OTUB1 (ENSMNEG00000041958) COX8A (ENSMNEG00000041613) NAA40 (ENSMNEG00000032942) RCOR2 (ENSMNEG00000038097) MARK2 (ENSMNEG00000045327) SPINDOC (ENSMNEG00000031960) ZFTA (ENSMNEG00000044610) RTN3 (ENSMNEG00000044489) ENSMNEG00000033797 ATL3 (ENSMNEG00000034634) PLAAT3 (ENSMNEG00000039570) PLAAT2 (ENSMNEG00000038914) PLAAT4 (ENSMNEG00000045290) LGALS12 (ENSMNEG00000040245) PLAAT5 (ENSMNEG00000034274) SLC22A8 (ENSMNEG00000038818) #22 SLC22A6 (ENSMNEG00000043253) #23 ENSMNEG00000025380 CHRM1 (ENSMNEG00000010440) #24 SLC3A2 (ENSMNEG00000044452) #25 TEX54 (ENSMNEG00000032932) WDR74 (ENSMNEG00000042608) #26 STX5 (ENSMNEG00000041981) #28 NXF1 (ENSMNEG00000034667) #29 TMEM223 (ENSMNEG00000030390) #30 TMEM179B (ENSMNEG00000000022) #31 TAF6L (ENSMNEG00000031769) #32 POLR2G (ENSMNEG00000041523) #33 ZBTB3 (ENSMNEG00000032222) #34 TTC9C (ENSMNEG00000038138) #35 HNRNPUL2 (ENSMNEG00000036955) #36 Cercopithecinae_b ANCESTRAL SPECIES 16 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00550000075025.`b.b.b ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Olive baboon MODERN SPECIES 3 MACROD1 (ENSPANG00000005925) OTUB1 (ENSPANG00000032360) COX8A (ENSPANG00000039572) NAA40 (ENSPANG00000002369) RCOR2 (ENSPANG00000007283) MARK2 (ENSPANG00000026211) SPINDOC (ENSPANG00000043963) ENSPANG00000045988 RTN3 (ENSPANG00000004686) ATL3 (ENSPANG00000025889) PLAAT3 (ENSPANG00000032107) PLAAT2 (ENSPANG00000005852) PLAAT4 (ENSPANG00000045447) LGALS12 (ENSPANG00000012182) PLAAT5 (ENSPANG00000015204) SLC22A8 (ENSPANG00000017441) #22 SLC22A6 (ENSPANG00000013726) #23 CHRM1 (ENSPANG00000021843) #24 SLC3A2 (ENSPANG00000012315) #25 WDR74 (ENSPANG00000013148) #26 STX5 (ENSPANG00000019343) #28 NXF1 (ENSPANG00000012132) #29 TMEM223 (ENSPANG00000012314) #30 TMEM179B (ENSPANG00000021117) #31 TAF6L (ENSPANG00000013647) #32 POLR2G (ENSPANG00000037490) #33 ZBTB3 (ENSPANG00000008469) #34 TTC9C (ENSPANG00000039235) #35 HNRNPUL2 (ENSPANG00000023745) #36 GNG3 (ENSPANG00000042558) #37 BSCL2 (ENSPANG00000011406) Cercopithecinae_d ANCESTRAL SPECIES 6 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00550000075025.`b.b.b ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Drill MODERN SPECIES 1111 OTUB1 (ENSMLEG00000039512) COX8A (ENSMLEG00000043306) NAA40 (ENSMLEG00000040713) RCOR2 (ENSMLEG00000041544) MARK2 (ENSMLEG00000042721) SPINDOC (ENSMLEG00000042638) ZFTA (ENSMLEG00000038685) RTN3 (ENSMLEG00000009760) ENSMLEG00000004674 ATL3 (ENSMLEG00000040413) PLAAT3 (ENSMLEG00000036330) PLAAT2 (ENSMLEG00000034362) PLAAT4 (ENSMLEG00000043996) LGALS12 (ENSMLEG00000041910) PLAAT5 (ENSMLEG00000040885) SLC22A8 (ENSMLEG00000044339) #22 SLC22A6 (ENSMLEG00000031737) #23 ENSMLEG00000022707 CHRM1 (ENSMLEG00000023394) #24 SLC3A2 (ENSMLEG00000042574) #25 WDR74 (ENSMLEG00000032669) #26 TEX54 (ENSMLEG00000030108) STX5 (ENSMLEG00000042667) #28 TMEM223 (ENSMLEG00000029784) #30 NXF1 (ENSMLEG00000026574) #29 TMEM179B (ENSMLEG00000039000) #31 TAF6L (ENSMLEG00000032444) #32 POLR2G (ENSMLEG00000032928) #33 ZBTB3 (ENSMLEG00000042521) #34 TTC9C (ENSMLEG00000036250) #35 HNRNPUL2 (ENSMLEG00000033906) #36 Sooty mangabey MODERN SPECIES 518 FLRT1 (ENSCATG00000003844) OTUB1 (ENSCATG00000036180) COX8A (ENSCATG00000033437) NAA40 (ENSCATG00000035111) RCOR2 (ENSCATG00000033413) MARK2 (ENSCATG00000030205) SPINDOC (ENSCATG00000043222) ZFTA (ENSCATG00000038355) RTN3 (ENSCATG00000038469) ATL3 (ENSCATG00000034537) PLAAT3 (ENSCATG00000039316) PLAAT2 (ENSCATG00000043587) PLAAT4 (ENSCATG00000042576) LGALS12 (ENSCATG00000038681) PLAAT5 (ENSCATG00000035197) SLC22A8 (ENSCATG00000034455) #22 SLC22A6 (ENSCATG00000033614) #23 ENSCATG00000005005 CHRM1 (ENSCATG00000004775) #24 SLC3A2 (ENSCATG00000043727) #25 WDR74 (ENSCATG00000035035) #26 TEX54 (ENSCATG00000044482) STX5 (ENSCATG00000033087) #28 NXF1 (ENSCATG00000044025) #29 TMEM223 (ENSCATG00000034294) #30 TMEM179B (ENSCATG00000036661) #31 TAF6L (ENSCATG00000031925) #32 POLR2G (ENSCATG00000034443) #33 ZBTB3 (ENSCATG00000034435) #34 TTC9C (ENSCATG00000035217) #35 HNRNPUL2 (ENSCATG00000034588) #36 Vervet Monkey MODERN SPECIES FLRT1 (ENSCSAG00000019174) OTUB1 (ENSCSAG00000006902) COX8A (ENSCSAG00000006887) NAA40 (ENSCSAG00000006886) RCOR2 (ENSCSAG00000006881) MARK2 (ENSCSAG00000006877) SPINDOC (ENSCSAG00000006870) ZFTA (ENSCSAG00000006866) ENSCSAG00000006861 ATL3 (ENSCSAG00000006859) PLAAT3 (ENSCSAG00000006852) PLAAT2 (ENSCSAG00000006843) PLAAT4 (ENSCSAG00000006839) LGALS12 (ENSCSAG00000006834) PLAAT5 (ENSCSAG00000006826) SLC22A8 (ENSCSAG00000006811) #22 SLC22A6 (ENSCSAG00000006803) #23 CHRM1 (ENSCSAG00000019175) #24 SLC3A2 (ENSCSAG00000006769) #25 WDR74 (ENSCSAG00000006751) #26 STX5 (ENSCSAG00000006748) #28 NXF1 (ENSCSAG00000006739) #29 TMEM223 (ENSCSAG00000006730) #30 TMEM179B (ENSCSAG00000006726) #31 TAF6L (ENSCSAG00000006720) #32 POLR2G (ENSCSAG00000006715) #33 ZBTB3 (ENSCSAG00000006712) #34 TTC9C (ENSCSAG00000006708) #35 HNRNPUL2 (ENSCSAG00000006701) #36 GNG3 (ENSCSAG00000006696) #37 BSCL2 (ENSCSAG00000006684) Rhinopithecus ANCESTRAL SPECIES 1 ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00550000075025.`b.b.b ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 Golden snub-nosed monkey MODERN SPECIES 689 NAA40 (ENSRROG00000040534) RCOR2 (ENSRROG00000037726) MARK2 (ENSRROG00000030516) SPINDOC (ENSRROG00000013487) ZFTA (ENSRROG00000004175) RTN3 (ENSRROG00000037363) ENSRROG00000045513 ATL3 (ENSRROG00000036759) PLAAT3 (ENSRROG00000043275) ENSRROG00000003500 PLAAT2 (ENSRROG00000043068) PLAAT4 (ENSRROG00000043528) LGALS12 (ENSRROG00000041051) PLAAT5 (ENSRROG00000020148) SLC22A9 (ENSRROG00000044160) #21 SLC22A8 (ENSRROG00000032433) #22 SLC22A6 (ENSRROG00000028501) #23 ENSRROG00000018171 CHRM1 (ENSRROG00000008830) #24 SLC3A2 (ENSRROG00000038784) #25 Black snub-nosed monkey MODERN SPECIES 708 NAA40 (ENSRBIG00000031380) MARK2 (ENSRBIG00000022423) SPINDOC (ENSRBIG00000033800) ZFTA (ENSRBIG00000027331) RTN3 (ENSRBIG00000032715) ENSRBIG00000044188 ATL3 (ENSRBIG00000028494) PLAAT3 (ENSRBIG00000032126) ENSRBIG00000029167 PLAAT2 (ENSRBIG00000042420) PLAAT4 (ENSRBIG00000042937) LGALS12 (ENSRBIG00000034955) PLAAT5 (ENSRBIG00000035439) SLC22A9 (ENSRBIG00000034031) #21 SLC22A8 (ENSRBIG00000040948) #22 SLC22A6 (ENSRBIG00000039106) #23 ENSRBIG00000018377 CHRM1 (ENSRBIG00000027683) #24 SLC3A2 (ENSRBIG00000039661) #25 Platyrrhini ANCESTRAL SPECIES 15 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00910000147729 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Cebidae ANCESTRAL SPECIES ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646.e.a #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00910000147729 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975.i.b #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Cebidae_a ANCESTRAL SPECIES 18 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000167143 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646.e.a #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00910000147729 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975.i.a #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Bolivian squirrel monkey MODERN SPECIES 42 AKAP17A (ENSSBOG00000019780) ASMTL (ENSSBOG00000032915) ENSSBOG00000032971 IL3RA (ENSSBOG00000019496) CSF2RA (ENSSBOG00000015957) RTN3 (ENSSBOG00000033351) ATL3 (ENSSBOG00000000876) PLAAT3 (ENSSBOG00000018544) PLAAT2 (ENSSBOG00000004535) PLAAT4 (ENSSBOG00000022541) LGALS12 (ENSSBOG00000022059) PLAAT5 (ENSSBOG00000018115) SLC22A9 (ENSSBOG00000030304) #21 SLC22A10 (ENSSBOG00000019055) SLC22A25 (ENSSBOG00000026216) SLC22A8 (ENSSBOG00000018591) #22 SLC22A6 (ENSSBOG00000016011) #23 ENSSBOG00000018203 CHRM1 (ENSSBOG00000021747) #24 SLC3A2 (ENSSBOG00000019428) #25 WDR74 (ENSSBOG00000030887) #26 STX5 (ENSSBOG00000018874) #28 ENSSBOG00000029029 NXF1 (ENSSBOG00000019587) #29 TMEM223 (ENSSBOG00000034790) #30 TMEM179B (ENSSBOG00000030503) #31 TAF6L (ENSSBOG00000030560) #32 POLR2G (ENSSBOG00000015220) #33 ZBTB3 (ENSSBOG00000032000) #34 TTC9C (ENSSBOG00000023530) #35 HNRNPUL2 (ENSSBOG00000026780) #36 Capuchin MODERN SPECIES 316 SLC22A8 (ENSCCAG00000037209) #22 SLC22A6 (ENSCCAG00000029767) #23 ENSCCAG00000018405 CHRM1 (ENSCCAG00000006069) #24 SLC3A2 (ENSCCAG00000028057) #25 WDR74 (ENSCCAG00000020060) #26 STX5 (ENSCCAG00000013514) #28 NXF1 (ENSCCAG00000030567) #29 TMEM223 (ENSCCAG00000009078) #30 TMEM179B (ENSCCAG00000028319) #31 TAF6L (ENSCCAG00000036664) #32 ENSCCAG00000027746 ZBTB3 (ENSCCAG00000021977) #34 ENSCCAG00000022329 HNRNPUL2 (ENSCCAG00000037674) #36 BSCL2 (ENSCCAG00000026340) Marmoset MODERN SPECIES 2 NAA40 (ENSCJAG00000018311) RCOR2 (ENSCJAG00000018326) MARK2 (ENSCJAG00000018341) SPINDOC (ENSCJAG00000018418) ZFTA (ENSCJAG00000047167) RTN3 (ENSCJAG00000018422) ATL3 (ENSCJAG00000018444) ENSCJAG00000033686 PLAAT3 (ENSCJAG00000018470) PLAAT2 (ENSCJAG00000018481) PLAAT4 (ENSCJAG00000018491) LGALS12 (ENSCJAG00000018504) PLAAT5 (ENSCJAG00000038446) SLC22A10 (ENSCJAG00000018512) ENSCJAG00000043818 SLC22A8 (ENSCJAG00000046805) #22 SLC22A6 (ENSCJAG00000018534) #23 ENSCJAG00000080197 CHRM1 (ENSCJAG00000018561) #24 ENSCJAG00000018569 #25 ENSCJAG00000018581 #26 TEX54 (ENSCJAG00000047769) STX5 (ENSCJAG00000018606) #28 NXF1 (ENSCJAG00000018635) #29 TMEM223 (ENSCJAG00000018681) #30 TMEM179B (ENSCJAG00000018683) #31 TAF6L (ENSCJAG00000040347) #32 ENSCJAG00000018688 #33 ZBTB3 (ENSCJAG00000018693) #34 TTC9C (ENSCJAG00000018703) #35 HNRNPUL2 (ENSCJAG00000018709) #36 Mas night monkey MODERN SPECIES 336 SLC22A8 (ENSANAG00000023797) #22 SLC22A6 (ENSANAG00000033554) #23 ENSANAG00000020205 CHRM1 (ENSANAG00000020194) #24 SLC3A2 (ENSANAG00000037370) #25 WDR74 (ENSANAG00000031747) #26 STX5 (ENSANAG00000028924) #28 NXF1 (ENSANAG00000024600) #29 TMEM223 (ENSANAG00000037673) #30 TMEM179B (ENSANAG00000036828) #31 TAF6L (ENSANAG00000037691) #32 POLR2G (ENSANAG00000037428) #33 ZBTB3 (ENSANAG00000026704) #34 TTC9C (ENSANAG00000030687) #35 HNRNPUL2 (ENSANAG00000027153) #36 GNG3 (ENSANAG00000028934) #37 Tarsier MODERN SPECIES 3012 SLC22A8 (ENSTSYG00000031102) #22 SLC22A6 (ENSTSYG00000002150) #23 Strepsirrhini ANCESTRAL SPECIES 20 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Lemuriformes ANCESTRAL SPECIES 14 ENSGT00940000159437 ENSGT00940000161630 ENSGT00390000015815 ENSGT00940000162317 ENSGT00940000160034 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00390000008351 ENSGT00390000007071 ENSGT00390000011180 ENSGT00390000018613.b.s.a ENSGT00940000161375.b ENSGT00940000162437 ENSGT00940000162436 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Mouse lemur MODERN SPECIES 27 CTSW (ENSMICG00000029293) FIBP (ENSMICG00000043326) CCDC85B (ENSMICG00000006912) FOSL1 (ENSMICG00000012846) C11orf68 (ENSMICG00000012852) DRAP1 (ENSMICG00000032164) TSGA10IP (ENSMICG00000038933) SART1 (ENSMICG00000030096) EIF1AD (ENSMICG00000038645) BANF1 (ENSMICG00000037787) CST6 (ENSMICG00000017209) CATSPER1 (ENSMICG00000017211) ENSMICG00000035999 PLAAT5 (ENSMICG00000004239) SLC22A24 (ENSMICG00000034911) SLC22A8 (ENSMICG00000006419) #22 SLC22A6 (ENSMICG00000026456) #23 CHRM1 (ENSMICG00000047391) #24 SLC3A2 (ENSMICG00000017390) #25 WDR74 (ENSMICG00000017388) #26 TEX54 (ENSMICG00000046387) STX5 (ENSMICG00000017386) #28 NXF1 (ENSMICG00000000980) #29 TMEM223 (ENSMICG00000046109) #30 TMEM179B (ENSMICG00000000976) #31 TAF6L (ENSMICG00000036223) #32 POLR2G (ENSMICG00000009967) #33 ZBTB3 (ENSMICG00000009961) #34 TTC9C (ENSMICG00000042013) #35 HNRNPUL2 (ENSMICG00000009943) #36 GNG3 (ENSMICG00000028299) #37 Lemuriformes_a ANCESTRAL SPECIES 3 ENSGT00940000159437 ENSGT00940000161630 ENSGT00390000015815 ENSGT00940000162317 ENSGT00940000160034 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00390000008351 ENSGT00390000007071 ENSGT00390000011180 ENSGT00390000018613.b.s.a ENSGT00940000161375.b ENSGT00940000162437 ENSGT00940000162436 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Coquerels sifaka MODERN SPECIES 124 EFEMP2 (ENSPCOG00000023038) CTSW (ENSPCOG00000015846) FIBP (ENSPCOG00000018954) CCDC85B (ENSPCOG00000002873) FOSL1 (ENSPCOG00000027454) C11orf68 (ENSPCOG00000003847) DRAP1 (ENSPCOG00000018977) TSGA10IP (ENSPCOG00000016636) SART1 (ENSPCOG00000008448) EIF1AD (ENSPCOG00000026199) BANF1 (ENSPCOG00000017573) CST6 (ENSPCOG00000014875) CATSPER1 (ENSPCOG00000017509) PLAAT5 (ENSPCOG00000014222) SLC22A24 (ENSPCOG00000014735) SLC22A8 (ENSPCOG00000024141) #22 SLC22A6 (ENSPCOG00000017938) #23 CHRM1 (ENSPCOG00000013215) #24 SLC3A2 (ENSPCOG00000028096) #25 WDR74 (ENSPCOG00000024846) #26 TEX54 (ENSPCOG00000020742) STX5 (ENSPCOG00000024733) #28 NXF1 (ENSPCOG00000024446) #29 TMEM223 (ENSPCOG00000028275) #30 TMEM179B (ENSPCOG00000023933) #31 TAF6L (ENSPCOG00000017276) #32 POLR2G (ENSPCOG00000024131) #33 ZBTB3 (ENSPCOG00000020656) #34 TTC9C (ENSPCOG00000017839) #35 HNRNPUL2 (ENSPCOG00000013502) #36 GNG3 (ENSPCOG00000017973) #37 Greater bamboo lemur MODERN SPECIES 101 PLAAT5 (ENSPSMG00000023332) SLC22A24 (ENSPSMG00000023328) SLC22A8 (ENSPSMG00000023317) #22 SLC22A6 (ENSPSMG00000023289) #23 ENSPSMG00000023261 CHRM1 (ENSPSMG00000023259) #24 SLC3A2 (ENSPSMG00000023235) #25 WDR74 (ENSPSMG00000023161) #26 STX5 (ENSPSMG00000023098) #28 NXF1 (ENSPSMG00000023076) #29 TMEM223 (ENSPSMG00000023035) #30 TMEM179B (ENSPSMG00000023026) #31 TAF6L (ENSPSMG00000023017) #32 POLR2G (ENSPSMG00000023003) #33 ZBTB3 (ENSPSMG00000022991) #34 ENSPSMG00000022990 HNRNPUL2 (ENSPSMG00000022973) #36 GNG3 (ENSPSMG00000022948) #37 Bushbaby MODERN SPECIES 255 DRAP1 (ENSOGAG00000016519) TSGA10IP (ENSOGAG00000016520) SART1 (ENSOGAG00000016523) EIF1AD (ENSOGAG00000016528) BANF1 (ENSOGAG00000016530) CST6 (ENSOGAG00000016534) CATSPER1 (ENSOGAG00000016536) LGALS12 (ENSOGAG00000009408) ENSOGAG00000027568 PLAAT5 (ENSOGAG00000004581) ENSOGAG00000003053 ENSOGAG00000029377 ENSOGAG00000003051 ENSOGAG00000030634 ENSOGAG00000006579 SLC22A8 (ENSOGAG00000003588) #22 SLC22A6 (ENSOGAG00000003585) #23 CHRM1 (ENSOGAG00000028685) #24 SLC3A2 (ENSOGAG00000027003) #25 WDR74 (ENSOGAG00000015303) #26 STX5 (ENSOGAG00000015298) #28 NXF1 (ENSOGAG00000008901) #29 TMEM223 (ENSOGAG00000024913) #30 TMEM179B (ENSOGAG00000008897) #31 TAF6L (ENSOGAG00000008893) #32 POLR2G (ENSOGAG00000032720) #33 ZBTB3 (ENSOGAG00000011414) #34 TTC9C (ENSOGAG00000003305) #35 HNRNPUL2 (ENSOGAG00000003302) #36 GNG3 (ENSOGAG00000034224) #37 BSCL2 (ENSOGAG00000025056) Laurasiatheria ANCESTRAL SPECIES 1 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000154901.C.b.e #22 Common shrew MODERN SPECIES 3496 ENSSARG00000012465 #22 Hedgehog MODERN SPECIES 4547 SLC22A8 (ENSEEUG00000008309) #22 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Artiodactyla ANCESTRAL SPECIES 1 ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162660.b.e.b ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.a.a #21 ENSGT00940000161239.k.a.b #21 ENSGT00940000161239.k.b #21 ENSGT00940000163667.a ENSGT00940000163667.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Suina ANCESTRAL SPECIES 14 ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.a.a #21 ENSGT00940000161239.k.a.b #21 ENSGT00940000161239.k.b #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT01090000260892 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Chacoan peccary MODERN SPECIES 920 COX8A (ENSCWAG00000015938) NAA40 (ENSCWAG00000015970) RCOR2 (ENSCWAG00000016039) MARK2 (ENSCWAG00000016084) SPINDOC (ENSCWAG00000016361) ZFTA (ENSCWAG00000016412) RTN3 (ENSCWAG00000016492) ATL3 (ENSCWAG00000016882) PLAAT3 (ENSCWAG00000016923) PLAAT4 (ENSCWAG00000016973) LGALS12 (ENSCWAG00000017018) ENSCWAG00000017126 PLAAT5 (ENSCWAG00000017146) SLC22A9 (ENSCWAG00000017234) #21 ENSCWAG00000017311 SLC22A8 (ENSCWAG00000017452) #22 SLC22A6 (ENSCWAG00000017692) #23 ENSCWAG00000018111 CHRM1 (ENSCWAG00000018122) #24 SLC3A2 (ENSCWAG00000018136) #25 WDR74 (ENSCWAG00000018241) #26 STX5 (ENSCWAG00000018346) #28 NXF1 (ENSCWAG00000018375) #29 TMEM223 (ENSCWAG00000018420) #30 TMEM179B (ENSCWAG00000018442) #31 TAF6L (ENSCWAG00000018470) #32 POLR2G (ENSCWAG00000018485) #33 ZBTB3 (ENSCWAG00000018506) #34 TTC9C (ENSCWAG00000018515) #35 HNRNPUL2 (ENSCWAG00000018533) #36 BSCL2 (ENSCWAG00000018615) Pig MODERN SPECIES 10 SPINDOC (ENSSSCG00000013048) ENSSSCG00000013051 ZFTA (ENSSSCG00000031666) ENSSSCG00000013052 ATL3 (ENSSSCG00000013054) PLAAT3 (ENSSSCG00000026914) LGALS12 (ENSSSCG00000013056) PLAAT5 (ENSSSCG00000061988) ENSSSCG00000013057 #21 ENSSSCG00000027453 #21 ENSSSCG00000028537 #21 ENSSSCG00000029248 ENSSSCG00000060619 ENSSSCG00000061902 ENSSSCG00000025413 SLC22A8 (ENSSSCG00000029516) #22 SLC22A6 (ENSSSCG00000023571) #23 ENSSSCG00000040074 SLC3A2 (ENSSSCG00000022404) #25 WDR74 (ENSSSCG00000028025) #26 TEX54 (ENSSSCG00000045572) STX5 (ENSSSCG00000026293) #28 NXF1 (ENSSSCG00000022866) #29 TMEM223 (ENSSSCG00000038711) #30 TMEM179B (ENSSSCG00000032696) #31 TAF6L (ENSSSCG00000020665) #32 POLR2G (ENSSSCG00000025571) #33 ENSSSCG00000037745 #34 TTC9C (ENSSSCG00000035472) #35 HNRNPUL2 (ENSSSCG00000028542) #36 BSCL2 (ENSSSCG00000020823) Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.a.a #21 ENSGT00940000161239.k.a.b #21 ENSGT00940000161239.k.b #21 ENSGT00940000163667.a ENSGT00940000163667.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.a.a #21 ENSGT00940000161239.k.a.b #21 ENSGT00940000161239.k.b #21 ENSGT00940000163667.a ENSGT00940000163667.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Cetacea ANCESTRAL SPECIES 4 ENSGT00390000006979.a ENSGT00390000006255.b.b.c ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.b #21 ENSGT00940000163667.b ENSGT00940000163667.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01090000260892 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Odontoceti ANCESTRAL SPECIES 4 ENSGT00390000006979.a ENSGT00390000006255.b.b.c ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.b #21 ENSGT00940000163667.a ENSGT00940000163667.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01090000260892 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805.m #35 ENSGT00940000160376 #36 Odontoceti_a ANCESTRAL SPECIES 4 ENSGT00390000006979.a ENSGT00390000006255.b.b.c ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.b #21 ENSGT00940000163667.a ENSGT00940000163667.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01090000260892 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805.m #35 ENSGT00940000160376 #36 Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00390000006979.a ENSGT00390000006255.b.b.c ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.b #21 ENSGT00940000163667.a ENSGT00940000163667.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01090000260892 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805.m #35 ENSGT00940000160376 #36 Monodontidae ANCESTRAL SPECIES 2 ENSGT00390000006979.a ENSGT00390000006255.b.b.c ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.b #21 ENSGT00940000163667.a ENSGT00940000163667.b ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01090000260892 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805.m #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 Narwhal MODERN SPECIES 314 ENSMMNG00015017860 COX8A (ENSMMNG00015017831) NAA40 (ENSMMNG00015017755) RCOR2 (ENSMMNG00015017683) MARK2 (ENSMMNG00015017076) SPINDOC (ENSMMNG00015016898) ZFTA (ENSMMNG00015016857) RTN3 (ENSMMNG00015016643) ATL3 (ENSMMNG00015016525) PLAAT3 (ENSMMNG00015016480) LGALS12 (ENSMMNG00015016331) ENSMMNG00015016290 SLC22A9 (ENSMMNG00015016223) #21 ENSMMNG00015016196 ENSMMNG00015016169 SLC22A8 (ENSMMNG00015015986) #22 SLC22A6 (ENSMMNG00015015915) #23 ENSMMNG00015015886 SLC3A2 (ENSMMNG00015020226) #25 WDR74 (ENSMMNG00015020091) #26 STX5 (ENSMMNG00015019992) #28 NXF1 (ENSMMNG00015019918) #29 TMEM223 (ENSMMNG00015019880) #30 TMEM179B (ENSMMNG00015019852) #31 TAF6L (ENSMMNG00015019824) #32 POLR2G (ENSMMNG00015019791) #33 ZBTB3 (ENSMMNG00015019770) #34 TTC9C (ENSMMNG00015019753) #35 HNRNPUL2 (ENSMMNG00015019703) #36 GNG3 (ENSMMNG00015019682) #37 BSCL2 (ENSMMNG00015019637) Beluga whale MODERN SPECIES 7 COX8A (ENSDLEG00000016831) NAA40 (ENSDLEG00000016844) RCOR2 (ENSDLEG00000016867) MARK2 (ENSDLEG00000016893) CUNH11orf84 (ENSDLEG00000016974) ZFTA (ENSDLEG00000017003) RTN3 (ENSDLEG00000017027) ATL3 (ENSDLEG00000017041) PLAAT3 (ENSDLEG00000017064) LGALS12 (ENSDLEG00000017077) ENSDLEG00000017093 ENSDLEG00000017101 SLC22A9 (ENSDLEG00000017119) #21 ENSDLEG00000017168 ENSDLEG00000017182 SLC22A8 (ENSDLEG00000017206) #22 SLC22A6 (ENSDLEG00000017243) #23 ENSDLEG00000017288 CHRM1 (ENSDLEG00000017296) #24 SLC3A2 (ENSDLEG00000017306) #25 WDR74 (ENSDLEG00000017431) #26 STX5 (ENSDLEG00000017563) #28 NXF1 (ENSDLEG00000017803) #29 TMEM223 (ENSDLEG00000018313) #30 TMEM179B (ENSDLEG00000018318) #31 TAF6L (ENSDLEG00000018328) #32 POLR2G (ENSDLEG00000018335) #33 ZBTB3 (ENSDLEG00000018348) #34 TTC9C (ENSDLEG00000018352) #35 HNRNPUL2 (ENSDLEG00000018363) #36 GNG3 (ENSDLEG00000018479) #37 Vaquita MODERN SPECIES 19 FLRT1 (ENSPSNG00000004816) MACROD1 (ENSPSNG00000004769) OTUB1 (ENSPSNG00000004699) COX8A (ENSPSNG00000004670) NAA40 (ENSPSNG00000004631) RCOR2 (ENSPSNG00000004582) MARK2 (ENSPSNG00000004479) SPINDOC (ENSPSNG00000004396) ZFTA (ENSPSNG00000004374) RTN3 (ENSPSNG00000004269) ATL3 (ENSPSNG00000004187) LGALS12 (ENSPSNG00000020749) SLC22A9 (ENSPSNG00000020492) #21 ENSPSNG00000020456 ENSPSNG00000020372 SLC22A8 (ENSPSNG00000020185) #22 SLC22A6 (ENSPSNG00000019972) #23 ENSPSNG00000019902 #23 ENSPSNG00000019881 CHRM1 (ENSPSNG00000019868) #24 SLC3A2 (ENSPSNG00000019788) #25 WDR74 (ENSPSNG00000019672) #26 NXF1 (ENSPSNG00000019489) #29 TMEM223 (ENSPSNG00000019439) #30 TMEM179B (ENSPSNG00000019377) #31 TAF6L (ENSPSNG00000019327) #32 POLR2G (ENSPSNG00000019278) #33 ZBTB3 (ENSPSNG00000019250) #34 TTC9C (ENSPSNG00000019225) #35 HNRNPUL2 (ENSPSNG00000019048) #36 GNG3 (ENSPSNG00000019000) #37 Dolphin MODERN SPECIES 2428 SLC22A8 (ENSTTRG00000002488) #22 SLC22A6 (ENSTTRG00000002487) #23 SLC3A2 (ENSTTRG00000002485) #25 WDR74 (ENSTTRG00000002484) #26 STX5 (ENSTTRG00000002483) #28 NXF1 (ENSTTRG00000002482) #29 TMEM223 (ENSTTRG00000002481) #30 TMEM179B (ENSTTRG00000002480) #31 TAF6L (ENSTTRG00000002479) #32 POLR2G (ENSTTRG00000002478) #33 ZBTB3 (ENSTTRG00000002477) #34 ENSTTRG00000002476 HNRNPUL2 (ENSTTRG00000002475) #36 GNG3 (ENSTTRG00000002474) #37 ENSTTRG00000002473 LRRN4CL (ENSTTRG00000002472) Sperm whale MODERN SPECIES 7 FLRT1 (ENSPCTG00005012477) MACROD1 (ENSPCTG00005012373) OTUB1 (ENSPCTG00005012259) ENSPCTG00005012211 NAA40 (ENSPCTG00005012111) RCOR2 (ENSPCTG00005012073) SPINDOC (ENSPCTG00005012035) ZFTA (ENSPCTG00005011961) RTN3 (ENSPCTG00005011595) ATL3 (ENSPCTG00005011358) LGALS12 (ENSPCTG00005011050) ENSPCTG00005010978 SLC22A9 (ENSPCTG00005010871) #21 ENSPCTG00005010850 ENSPCTG00005010706 SLC22A8 (ENSPCTG00005010325) #22 SLC22A6 (ENSPCTG00005009975) #23 ENSPCTG00005009866 #23 SLC3A2 (ENSPCTG00005009673) #25 ENSPCTG00005009626 ENSPCTG00005009578 INCENP (ENSPCTG00005009388) ENSPCTG00005009299 RAB3IL1 (ENSPCTG00005008916) ENSPCTG00005008871 MYRF (ENSPCTG00005008529) TMEM258 (ENSPCTG00005008491) FEN1 (ENSPCTG00005008477) ENSPCTG00005008459 FADS1 (ENSPCTG00005008419) FADS2 (ENSPCTG00005008356) Blue whale MODERN SPECIES 19 OTUB1 (ENSBMSG00010010263) ENSBMSG00010010232 NAA40 (ENSBMSG00010010195) RCOR2 (ENSBMSG00010010142) MARK2 (ENSBMSG00010009492) SPINDOC (ENSBMSG00010009408) ZFTA (ENSBMSG00010009395) RTN3 (ENSBMSG00010009260) ATL3 (ENSBMSG00010009168) PLAAT3 (ENSBMSG00010009143) LGALS12 (ENSBMSG00010009076) PLAAT5 (ENSBMSG00010009039) SLC22A9 (ENSBMSG00010009021) #21 ENSBMSG00010009002 ENSBMSG00010008993 SLC22A8 (ENSBMSG00010008957) #22 SLC22A6 (ENSBMSG00010008894) #23 ENSBMSG00010008869 CHRM1 (ENSBMSG00010008857) #24 SLC3A2 (ENSBMSG00010008809) #25 WDR74 (ENSBMSG00010008708) #26 NXF1 (ENSBMSG00010008667) #29 TMEM223 (ENSBMSG00010008640) #30 TMEM179B (ENSBMSG00010008625) #31 TAF6L (ENSBMSG00010008522) #32 POLR2G (ENSBMSG00010008473) #33 ZBTB3 (ENSBMSG00010008452) #34 TTC9C (ENSBMSG00010008436) #35 HNRNPUL2 (ENSBMSG00010008413) #36 GNG3 (ENSBMSG00010008393) #37 BSCL2 (ENSBMSG00010008336) Pecora ANCESTRAL SPECIES 13 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d.a.a ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.l #21 ENSGT00940000163667.a.c.b ENSGT00940000163667.a.c.a.b.b.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Yarkand deer MODERN SPECIES 11 SPINDOC (ENSCHYG00000000325) ZFTA (ENSCHYG00000000304) RTN3 (ENSCHYG00000000247) ATL3 (ENSCHYG00000000208) PLAAT3 (ENSCHYG00000000190) LGALS12 (ENSCHYG00000000154) ENSCHYG00000000141 ENSCHYG00000000122 #21 ENSCHYG00000000102 #21 ENSCHYG00000000068 #21 ENSCHYG00000000059 ENSCHYG00000000040 ENSCHYG00000000030 ENSCHYG00000020357 ENSCHYG00000020101 SLC22A8 (ENSCHYG00000019926) #22 SLC22A6 (ENSCHYG00000019813) #23 CHRM1 (ENSCHYG00000019787) #24 SLC3A2 (ENSCHYG00000019634) #25 WDR74 (ENSCHYG00000019192) #26 ENSCHYG00000019153 STX5 (ENSCHYG00000018938) #28 NXF1 (ENSCHYG00000018593) #29 TMEM223 (ENSCHYG00000018545) #30 TMEM179B (ENSCHYG00000018397) #31 TAF6L (ENSCHYG00000018298) #32 POLR2G (ENSCHYG00000018228) #33 ZBTB3 (ENSCHYG00000018210) #34 TTC9C (ENSCHYG00000018166) #35 HNRNPUL2 (ENSCHYG00000017808) #36 GNG3 (ENSCHYG00000017765) #37 Percora_a ANCESTRAL SPECIES 16 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d.a.a ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.a.a #21 ENSGT00940000161239.k.a.b #21 ENSGT00940000161239.k.b #21 ENSGT00940000163667.b ENSGT00940000163667.a.c.a.b.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805.p #35 ENSGT00940000160376 #36 ENSGT00390000011639 Siberian musk deer MODERN SPECIES 1224 SPINDOC (ENSMMSG00000008448) ENSMMSG00000008470 ZFTA (ENSMMSG00000008490) RTN3 (ENSMMSG00000008565) ATL3 (ENSMMSG00000008889) PLAAT3 (ENSMMSG00000008953) LGALS12 (ENSMMSG00000009042) PLAAT5 (ENSMMSG00000009542) ENSMMSG00000009592 #21 ENSMMSG00000009715 #21 ENSMMSG00000011665 #21 ENSMMSG00000011721 ENSMMSG00000011784 ENSMMSG00000011868 ENSMMSG00000011879 SLC22A8 (ENSMMSG00000011893) #22 SLC22A6 (ENSMMSG00000012011) #23 CHRM1 (ENSMMSG00000012096) #24 SLC3A2 (ENSMMSG00000012111) #25 WDR74 (ENSMMSG00000012237) #26 STX5 (ENSMMSG00000012364) #28 ENSMMSG00000012430 #29 TMEM223 (ENSMMSG00000012527) #30 TMEM179B (ENSMMSG00000012548) #31 TAF6L (ENSMMSG00000012575) #32 ENSMMSG00000012609 #33 ZBTB3 (ENSMMSG00000012634) #34 TTC9C (ENSMMSG00000012643) #35 HNRNPUL2 (ENSMMSG00000012673) #36 BSCL2 (ENSMMSG00000012721) ENSMMSG00000012801 #37 Bovidae ANCESTRAL SPECIES 16 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d.a.a ENSGT00940000154853.d.a.b.b ENSGT00940000154853.d.a.b.a.b ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.a.a #21 ENSGT00940000161239.k.a.b #21 ENSGT00940000161239.k.b #21 ENSGT00940000163667.b ENSGT00940000163667.a.c.b ENSGT00940000163667.a.c.a.b.b.b ENSGT00940000163667.a.c.a.b.b.a ENSGT00940000163667.a.c.a.b.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805.p #35 ENSGT00940000160376 #36 ENSGT00390000011639 Bovinae ANCESTRAL SPECIES 24 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d.a.a ENSGT00940000154853.d.a.b.b ENSGT00940000154853.d.a.b.a.b ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.a.b #21 ENSGT00940000161239.k.b #21 ENSGT00940000163667.b ENSGT00940000163667.a.c.b ENSGT00940000163667.a.c.a.b.b.b ENSGT00940000163667.a.c.a.b.b.a ENSGT00940000163667.a.c.a.b.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805.p #35 ENSGT00940000160376 #36 ENSGT00390000011639 Bos ANCESTRAL SPECIES 11 ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d.a.a ENSGT00940000154853.d.a.b.b ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.a.b #21 ENSGT00940000161239.k.b #21 ENSGT00940000163667.b ENSGT00940000163667.a.c.b ENSGT00940000163667.a.c.a.b.b.b ENSGT00940000163667.a.c.a.b.b.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805.p.b #35 ENSGT00940000160376 #36 ENSGT00390000011639 Bos_b ANCESTRAL SPECIES 10 ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d.a.a ENSGT00940000154853.d.a.b.b ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.a.b #21 ENSGT00940000161239.k.b #21 ENSGT00940000163667.b ENSGT00940000163667.a.c.b ENSGT00940000163667.a.c.a.a ENSGT00940000163667.a.c.a.b.b.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00940000162994.f.d.k.a.a.a ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805.p.a.a #35 ENSGT00940000161805.p.b #35 Hybrid Bos Indicus MODERN SPECIES 21 MARK2 (ENSBIXG00005012594) SPINDOC (ENSBIXG00005012481) RTN3 (ENSBIXG00005012431) ZFTA (ENSBIXG00005012369) ATL3 (ENSBIXG00005012347) ENSBIXG00005001297 ENSBIXG00005012288 LGALS12 (ENSBIXG00005012274) PLAAT5 (ENSBIXG00005012206) ENSBIXG00005012170 #21 ENSBIXG00005006329 ENSBIXG00005011983 ENSBIXG00005011974 ENSBIXG00005011910 ENSBIXG00005011899 SLC22A8 (ENSBIXG00005000435) #22 SLC22A6 (ENSBIXG00005011838) #23 ENSBIXG00005011826 #23 SLC3A2 (ENSBIXG00005011715) #25 ENSBIXG00005011601 WDR74 (ENSBIXG00005011524) #26 STX5 (ENSBIXG00005000467) #28 ENSBIXG00005011400 NXF1 (ENSBIXG00005011391) #29 TMEM223 (ENSBIXG00005011347) #30 TMEM179B (ENSBIXG00005011316) #31 TAF6L (ENSBIXG00005001087) #32 POLR2G (ENSBIXG00005011296) #33 TTC9C (ENSBIXG00005011271) #35 HNRNPUL2 (ENSBIXG00005006206) #36 BSCL2 (ENSBIXG00005011232) Cow MODERN SPECIES 21 PLA2G16 (ENSBTAG00000015248) ENSBTAG00000052238 ENSBTAG00000054910 ENSBTAG00000011019 ENSBTAG00000037645 LGALS12 (ENSBTAG00000007108) PLAAT5 (ENSBTAG00000032730) ENSBTAG00000003236 #21 SLC22A9 (ENSBTAG00000039463) #21 ENSBTAG00000000518 ENSBTAG00000054320 SLC22A10 (ENSBTAG00000014584) ENSBTAG00000038655 ENSBTAG00000037570 ENSBTAG00000050277 SLC22A8 (ENSBTAG00000013644) #22 SLC22A6 (ENSBTAG00000013642) #23 ENSBTAG00000047110 #23 CHRM1 (ENSBTAG00000011579) #24 ENSBTAG00000050000 SLC3A2 (ENSBTAG00000013240) #25 WDR74 (ENSBTAG00000009491) #26 ENSBTAG00000048482 STX5 (ENSBTAG00000009490) #28 NXF1 (ENSBTAG00000009488) #29 TMEM223 (ENSBTAG00000009487) #30 TMEM179B (ENSBTAG00000009486) #31 TAF6L (ENSBTAG00000009484) #32 POLR2G (ENSBTAG00000009483) #33 ZBTB3 (ENSBTAG00000021329) #34 TTC9C (ENSBTAG00000000773) #35 Bos_a ANCESTRAL SPECIES 85 ENSGT00940000163667.a.c.a.b.b.a ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805.p.b #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 Wild yak MODERN SPECIES 1714 ENSBMUG00000023806 ENSBMUG00000023781 ENSBMUG00000023761 ENSBMUG00000023753 SLC22A8 (ENSBMUG00000023746) #22 SLC22A6 (ENSBMUG00000023728) #23 ENSBMUG00000023697 #23 CHRM1 (ENSBMUG00000023670) #24 SLC3A2 (ENSBMUG00000023664) #25 WDR74 (ENSBMUG00000023565) #26 STX5 (ENSBMUG00000023529) #28 NXF1 (ENSBMUG00000023515) #29 TMEM223 (ENSBMUG00000023496) #30 TMEM179B (ENSBMUG00000023489) #31 TAF6L (ENSBMUG00000023469) #32 POLR2G (ENSBMUG00000023457) #33 ZBTB3 (ENSBMUG00000023437) #34 TTC9C (ENSBMUG00000023431) #35 HNRNPUL2 (ENSBMUG00000023420) #36 GNG3 (ENSBMUG00000023415) #37 American bison MODERN SPECIES 3248 ENSBBBG00000020133 ENSBBBG00000020097 ENSBBBG00000020093 ENSBBBG00000007440 LGALS12 (ENSBBBG00000005432) PLAAT5 (ENSBBBG00000005425) ENSBBBG00000005424 #21 ENSBBBG00000020020 #21 ENSBBBG00000020008 ENSBBBG00000005407 ENSBBBG00000005111 ENSBBBG00000019974 ENSBBBG00000019971 ENSBBBG00000019967 SLC22A8 (ENSBBBG00000005123) #22 SLC22A6 (ENSBBBG00000019919) #23 ENSBBBG00000019891 #23 CHRM1 (ENSBBBG00000005365) #24 SLC3A2 (ENSBBBG00000019812) #25 WDR74 (ENSBBBG00000005172) #26 STX5 (ENSBBBG00000005199) #28 NXF1 (ENSBBBG00000019622) #29 TMEM223 (ENSBBBG00000019568) #30 TMEM179B (ENSBBBG00000019563) #31 TAF6L (ENSBBBG00000005295) #32 POLR2G (ENSBBBG00000008173) #33 ZBTB3 (ENSBBBG00000019531) #34 TTC9C (ENSBBBG00000005281) #35 HNRNPUL2 (ENSBBBG00000019515) #36 GNG3 (ENSBBBG00000019496) #37 Caprinae ANCESTRAL SPECIES 20 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d.a.a ENSGT00940000154853.d.a.b.b ENSGT00940000154853.d.a.b.a.b ENSGT00940000154853.d.a.b.a.a ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.k.a.a #21 ENSGT00940000161239.k.a.b #21 ENSGT00940000161239.k.b #21 ENSGT00940000163667.b ENSGT00940000161239.l #21 ENSGT00940000163667.a.c.b ENSGT00940000163667.a.c.a.a.c ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805.p #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 Goat MODERN SPECIES 21 SPINDOC (ENSCHIG00000009623) ZFTA (ENSCHIG00000022847) ENSCHIG00000014185 ATL3 (ENSCHIG00000022420) ENSCHIG00000024459 ENSCHIG00000014874 ENSCHIG00000016166 ENSCHIG00000003540 ENSCHIG00000011083 ENSCHIG00000020309 PLAAT5 (ENSCHIG00000005227) SLC22A9 (ENSCHIG00000000518) #21 ENSCHIG00000004328 #21 ENSCHIG00000025065 ENSCHIG00000012746 SLC22A8 (ENSCHIG00000015089) #22 SLC22A6 (ENSCHIG00000023566) #23 ENSCHIG00000027134 #23 CHRM1 (ENSCHIG00000012488) #24 SLC3A2 (ENSCHIG00000017772) #25 WDR74 (ENSCHIG00000022750) #26 STX5 (ENSCHIG00000026215) #28 NXF1 (ENSCHIG00000010065) #29 TMEM223 (ENSCHIG00000020466) #30 TMEM179B (ENSCHIG00000026546) #31 TAF6L (ENSCHIG00000013919) #32 POLR2G (ENSCHIG00000023730) #33 ZBTB3 (ENSCHIG00000008054) #34 TTC9C (ENSCHIG00000014645) #35 HNRNPUL2 (ENSCHIG00000020213) #36 GNG3 (ENSCHIG00000015824) #37 Rambouillet Sheep MODERN SPECIES 13 SPINDOC (ENSOARG00020023441) ZFTA (ENSOARG00020023427) RTN3 (ENSOARG00020023116) ATL3 (ENSOARG00020022978) ENSOARG00020022912 ENSOARG00020022856 LGALS12 (ENSOARG00020022698) PLAAT5 (ENSOARG00020022652) ENSOARG00020022597 #21 ENSOARG00020022570 #21 ENSOARG00020022539 #21 ENSOARG00020022510 ENSOARG00020022414 ENSOARG00020022359 ENSOARG00020022311 SLC22A8 (ENSOARG00020022122) #22 SLC22A6 (ENSOARG00020022001) #23 ENSOARG00020021949 #23 CHRM1 (ENSOARG00020021898) #24 SLC3A2 (ENSOARG00020021842) #25 WDR74 (ENSOARG00020021626) #26 STX5 (ENSOARG00020021530) #28 NXF1 (ENSOARG00020021483) #29 TMEM223 (ENSOARG00020021462) #30 TMEM179B (ENSOARG00020021391) #31 TAF6L (ENSOARG00020021329) #32 POLR2G (ENSOARG00020021260) #33 ZBTB3 (ENSOARG00020021245) #34 ENSOARG00020021233 TTC9C (ENSOARG00020021198) #35 HNRNPUL2 (ENSOARG00020021145) #36 Camelidae ANCESTRAL SPECIES 55 ENSGT00940000162436 ENSGT00940000161239.k.a.a #21 ENSGT00940000161239.k.b #21 ENSGT00940000163667.b.f ENSGT00940000163667.b.e ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589.e #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Arabian camel MODERN SPECIES 1 NAA40 (ENSCDRG00005019104) RCOR2 (ENSCDRG00005019145) MARK2 (ENSCDRG00005019188) SPINDOC (ENSCDRG00005019332) ZFTA (ENSCDRG00005019367) RTN3 (ENSCDRG00005019397) ATL3 (ENSCDRG00005019542) PLAAT3 (ENSCDRG00005019659) ENSCDRG00005019739 LGALS12 (ENSCDRG00005019752) ENSCDRG00005019804 ENSCDRG00005019903 #21 ENSCDRG00005019931 #21 ENSCDRG00005019949 ENSCDRG00005019998 SLC22A8 (ENSCDRG00005020013) #22 SLC22A6 (ENSCDRG00005020053) #23 ENSCDRG00005020082 #23 ENSCDRG00005004630 CHRM1 (ENSCDRG00005004637) #24 SLC3A2 (ENSCDRG00005004655) #25 WDR74 (ENSCDRG00005004811) #26 STX5 (ENSCDRG00005004888) #28 NXF1 (ENSCDRG00005004967) #29 TMEM223 (ENSCDRG00005005013) #30 TMEM179B (ENSCDRG00005005027) #31 TAF6L (ENSCDRG00005005091) #32 POLR2G (ENSCDRG00005005119) #33 ZBTB3 (ENSCDRG00005005155) #34 TTC9C (ENSCDRG00005005167) #35 HNRNPUL2 (ENSCDRG00005005188) #36 Alpaca MODERN SPECIES 1079 SLC22A8 (ENSVPAG00000000079) #22 Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Carnivora ANCESTRAL SPECIES 7 ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B.c.b #37 Caniformia ANCESTRAL SPECIES 21 ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B.c.b #37 Caniformia_b ANCESTRAL SPECIES 19 ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162660.b.e.b ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B.c.b #37 Ursidae ANCESTRAL SPECIES 2 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162660.b.e.b ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B.c.b #37 Ursus ANCESTRAL SPECIES 63 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B.c.b #37 American black bear MODERN SPECIES 3685 SLC22A8 (ENSUAMG00000017118) #22 SLC22A6 (ENSUAMG00000017121) #23 ENSUAMG00000017125 CHRM1 (ENSUAMG00000017126) #24 SLC3A2 (ENSUAMG00000017134) #25 WDR74 (ENSUAMG00000017153) #26 ENSUAMG00000017188 Polar bear MODERN SPECIES 303 ENSUMAG00000014844 SLC22A9 (ENSUMAG00000014693) #21 SLC22A10 (ENSUMAG00000014649) SLC22A8 (ENSUMAG00000014618) #22 SLC22A6 (ENSUMAG00000014598) #23 ENSUMAG00000014595 CHRM1 (ENSUMAG00000014593) #24 SLC3A2 (ENSUMAG00000014587) #25 WDR74 (ENSUMAG00000014565) #26 STX5 (ENSUMAG00000014558) #28 NXF1 (ENSUMAG00000014552) #29 TMEM179B (ENSUMAG00000014547) #31 ENSUMAG00000014541 POLR2G (ENSUMAG00000014537) #33 ZBTB3 (ENSUMAG00000014533) #34 TTC9C (ENSUMAG00000014527) #35 HNRNPUL2 (ENSUMAG00000014465) #36 GNG3 (ENSUMAG00000014458) #37 BSCL2 (ENSUMAG00000014444) Giant Panda MODERN SPECIES 7 MACROD1 (ENSAMEG00000017979) OTUB1 (ENSAMEG00000018084) COX8A (ENSAMEG00000026424) NAA40 (ENSAMEG00000030824) RCOR2 (ENSAMEG00000018101) MARK2 (ENSAMEG00000018111) SPINDOC (ENSAMEG00000018132) ZFTA (ENSAMEG00000025175) RTN3 (ENSAMEG00000018135) ATL3 (ENSAMEG00000018141) PLAAT3 (ENSAMEG00000023459) ENSAMEG00000018150 LGALS12 (ENSAMEG00000027710) SLC22A9 (ENSAMEG00000005817) #21 SLC22A10 (ENSAMEG00000005956) SLC22A8 (ENSAMEG00000005991) #22 SLC22A6 (ENSAMEG00000006012) #23 CHRM1 (ENSAMEG00000020258) #24 SLC3A2 (ENSAMEG00000006140) #25 WDR74 (ENSAMEG00000006160) #26 STX5 (ENSAMEG00000006206) #28 NXF1 (ENSAMEG00000006237) #29 TMEM223 (ENSAMEG00000024479) #30 TMEM179B (ENSAMEG00000006357) #31 TAF6L (ENSAMEG00000006364) #32 POLR2G (ENSAMEG00000006386) #33 ZBTB3 (ENSAMEG00000024771) #34 TTC9C (ENSAMEG00000006425) #35 HNRNPUL2 (ENSAMEG00000006434) #36 ENSAMEG00000002116 #37 GNG3 (ENSAMEG00000006462) #37 Mustelinae ANCESTRAL SPECIES 3 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B.c.b #37 Ferret MODERN SPECIES 314 FLRT1 (ENSMPUG00000019993) OTUB1 (ENSMPUG00000013314) NAA40 (ENSMPUG00000013317) RCOR2 (ENSMPUG00000013320) MARK2 (ENSMPUG00000013326) SPINDOC (ENSMPUG00000013338) ZFTA (ENSMPUG00000013353) ENSMPUG00000013356 ATL3 (ENSMPUG00000013363) ENSMPUG00000013476 ENSMPUG00000013479 LGALS12 (ENSMPUG00000013482) PLAAT5 (ENSMPUG00000013509) SLC22A9 (ENSMPUG00000013528) #21 ENSMPUG00000013536 SLC22A8 (ENSMPUG00000013544) #22 SLC22A6 (ENSMPUG00000013551) #23 CHRM1 (ENSMPUG00000019995) #24 SLC3A2 (ENSMPUG00000013553) #25 WDR74 (ENSMPUG00000013557) #26 TMEM179B (ENSMPUG00000013609) #31 STX5 (ENSMPUG00000013614) #28 NXF1 (ENSMPUG00000013658) #29 TMEM223 (ENSMPUG00000013664) #30 POLR2G (ENSMPUG00000013667) #33 ZBTB3 (ENSMPUG00000013694) #34 TTC9C (ENSMPUG00000013698) #35 HNRNPUL2 (ENSMPUG00000013707) #36 GNG3 (ENSMPUG00000013710) #37 BSCL2 (ENSMPUG00000013712) UBXN1 (ENSMPUG00000013715) American mink MODERN SPECIES 215 LGALS12 (ENSNVIG00000019356) PLAAT5 (ENSNVIG00000019411) SLC22A9 (ENSNVIG00000019546) #21 SLC22A10 (ENSNVIG00000020248) SLC22A8 (ENSNVIG00000020290) #22 SLC22A6 (ENSNVIG00000020357) #23 ENSNVIG00000020395 CHRM1 (ENSNVIG00000020398) #24 SLC3A2 (ENSNVIG00000020406) #25 WDR74 (ENSNVIG00000020499) #26 STX5 (ENSNVIG00000020600) #28 NXF1 (ENSNVIG00000020616) #29 TMEM223 (ENSNVIG00000020681) #30 TMEM179B (ENSNVIG00000020688) #31 TAF6L (ENSNVIG00000020709) #32 RPB7 (ENSNVIG00000020718) #33 ZBTB3 (ENSNVIG00000020739) #34 TTC9C (ENSNVIG00000020741) #35 HNRNPUL2 (ENSNVIG00000020754) #36 BSCL2 (ENSNVIG00000020778) Canidae ANCESTRAL SPECIES 13 ENSGT00390000006255.b.b.a ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B.c.a #37 ENSGT00390000011639 Canis_lupus ANCESTRAL SPECIES 7 ENSGT00390000006255.b.b.a ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d.e ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B.c.a #37 ENSGT00390000011639 Dog MODERN SPECIES 9 SPINDOC (ENSCAFG00845005829) ZFTA (ENSCAFG00845005900) RTN3 (ENSCAFG00845006009) ATL3 (ENSCAFG00845006281) ENSCAFG00845006483 PLAAT3 (ENSCAFG00845006522) ENSCAFG00845006559 PLAAT4 (ENSCAFG00845006599) LGALS12 (ENSCAFG00845006674) PLAAT5 (ENSCAFG00845006736) SLC22A9 (ENSCAFG00845006786) #21 SLC22A10 (ENSCAFG00845006977) ENSCAFG00845007034 ENSCAFG00845007087 #21 ENSCAFG00845007123 ENSCAFG00845007168 #22 SLC22A6 (ENSCAFG00845007241) #23 CHRM1 (ENSCAFG00845007309) #24 SLC3A2 (ENSCAFG00845007354) #25 WDR74 (ENSCAFG00845007617) #26 STX5 (ENSCAFG00845007709) #28 NXF1 (ENSCAFG00845007836) #29 TMEM179B (ENSCAFG00845008033) #31 TMEM223 (ENSCAFG00845008107) #30 TAF6L (ENSCAFG00845008143) #32 POLR2G (ENSCAFG00845008221) #33 ZBTB3 (ENSCAFG00845008270) #34 TTC9C (ENSCAFG00845008314) #35 HNRNPUL2 (ENSCAFG00845008372) #36 BSCL2 (ENSCAFG00845008494) GNG3 (ENSCAFG00845008569) #37 Dingo MODERN SPECIES 36 MARK2 (ENSCAFG00020014004) SPINDOC (ENSCAFG00020013994) ZFTA (ENSCAFG00020013984) ENSCAFG00020013944 ENSCAFG00020013937 ATL3 (ENSCAFG00020013890) PLAAT3 (ENSCAFG00020013886) ENSCAFG00020013885 PLAAT4 (ENSCAFG00020013883) LGALS12 (ENSCAFG00020013880) ENSCAFG00020013852 SLC22A9 (ENSCAFG00020013593) #21 ENSCAFG00020013569 SLC22A10 (ENSCAFG00020013312) ENSCAFG00020013304 #21 SLC22A8 (ENSCAFG00020013254) #22 SLC22A6 (ENSCAFG00020013234) #23 CHRM1 (ENSCAFG00020013229) #24 SLC3A2 (ENSCAFG00020013226) #25 WDR74 (ENSCAFG00020013159) #26 STX5 (ENSCAFG00020013153) #28 NXF1 (ENSCAFG00020013149) #29 TMEM223 (ENSCAFG00020013148) #30 TMEM179B (ENSCAFG00020013145) #31 TAF6L (ENSCAFG00020013140) #32 POLR2G (ENSCAFG00020013136) #33 ZBTB3 (ENSCAFG00020013133) #34 TTC9C (ENSCAFG00020013129) #35 HNRNPUL2 (ENSCAFG00020013120) #36 GNG3 (ENSCAFG00020013115) #37 BSCL2 (ENSCAFG00020013107) Red fox MODERN SPECIES 49 NAA40 (ENSVVUG00000029786) RCOR2 (ENSVVUG00000029787) MARK2 (ENSVVUG00000029791) SPINDOC (ENSVVUG00000029796) ZFTA (ENSVVUG00000029797) RTN3 (ENSVVUG00000029798) ATL3 (ENSVVUG00000029799) PLA2G16 (ENSVVUG00000029803) ENSVVUG00000029804 RARRES3 (ENSVVUG00000029807) LGALS12 (ENSVVUG00000029809) ENSVVUG00000029813 SLC22A9 (ENSVVUG00000029817) #21 SLC22A10 (ENSVVUG00000029819) ENSVVUG00000029820 #21 SLC22A8 (ENSVVUG00000029821) #22 SLC22A6 (ENSVVUG00000029822) #23 CHRM1 (ENSVVUG00000029823) #24 SLC3A2 (ENSVVUG00000029824) #25 WDR74 (ENSVVUG00000029836) #26 STX5 (ENSVVUG00000029839) #28 NXF1 (ENSVVUG00000029840) #29 TMEM223 (ENSVVUG00000029841) #30 TMEM179B (ENSVVUG00000029842) #31 TAF6L (ENSVVUG00000029843) #32 POLR2G (ENSVVUG00000029844) #33 TTC9C (ENSVVUG00000029845) #35 HNRNPUL2 (ENSVVUG00000029847) #36 GNG3 (ENSVVUG00000029850) #37 BSCL2 (ENSVVUG00000029852) ENSVVUG00000029854 Felidae ANCESTRAL SPECIES ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000163667 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B.c.b #37 Panthera ANCESTRAL SPECIES 18 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000163667 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B.c.b #37 Panthera_a ANCESTRAL SPECIES 18 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000163667 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B.c.b #37 leopard MODERN SPECIES 64 FLRT1 (ENSPPRG00000015154) ENSPPRG00000003587 COX8A (ENSPPRG00000004014) NAA40 (ENSPPRG00000004526) RCOR2 (ENSPPRG00000005918) MARK2 (ENSPPRG00000009691) SPINDOC (ENSPPRG00000010767) ZFTA (ENSPPRG00000011316) ENSPPRG00000012195 ATL3 (ENSPPRG00000012865) PLAAT3 (ENSPPRG00000013267) LGALS12 (ENSPPRG00000015392) PLAAT5 (ENSPPRG00000017226) SLC22A9 (ENSPPRG00000019825) #21 ENSPPRG00000015426 #21 SLC22A8 (ENSPPRG00000023668) #22 SLC22A6 (ENSPPRG00000000682) #23 ENSPPRG00000015606 ENSPPRG00000015614 CHRM1 (ENSPPRG00000015634) #24 SLC3A2 (ENSPPRG00000001175) #25 WDR74 (ENSPPRG00000002422) #26 STX5 (ENSPPRG00000003034) #28 NXF1 (ENSPPRG00000004342) #29 TMEM223 (ENSPPRG00000004902) #30 TMEM179B (ENSPPRG00000005200) #31 TAF6L (ENSPPRG00000005589) #32 POLR2G (ENSPPRG00000005669) #33 ZBTB3 (ENSPPRG00000005891) #34 TTC9C (ENSPPRG00000005993) #35 HNRNPUL2 (ENSPPRG00000006380) #36 Tiger MODERN SPECIES 369 STIP1 (ENSPTIG00000000613) ENSPTIG00000009338 COX8A (ENSPTIG00000009882) NAA40 (ENSPTIG00000010415) RCOR2 (ENSPTIG00000012240) MARK2 (ENSPTIG00000013108) SPINDOC (ENSPTIG00000007294) ENSPTIG00000008262 ATL3 (ENSPTIG00000009817) PLAAT3 (ENSPTIG00000012106) LGALS12 (ENSPTIG00000013920) PLAAT5 (ENSPTIG00000016710) SLC22A9 (ENSPTIG00000018254) #21 ENSPTIG00000019174 ENSPTIG00000006918 #21 SLC22A8 (ENSPTIG00000019571) #22 SLC22A6 (ENSPTIG00000008570) #23 ENSPTIG00000007098 CHRM1 (ENSPTIG00000007102) #24 SLC3A2 (ENSPTIG00000012539) #25 WDR74 (ENSPTIG00000016962) #26 STX5 (ENSPTIG00000005204) #28 NXF1 (ENSPTIG00000008897) #29 ENSPTIG00000014441 #31 TAF6L (ENSPTIG00000014940) #32 POLR2G (ENSPTIG00000015781) #33 ZBTB3 (ENSPTIG00000016774) #34 TTC9C (ENSPTIG00000017476) #35 HNRNPUL2 (ENSPTIG00000017670) #36 ENSPTIG00000019130 #37 BSCL2 (ENSPTIG00000019239) Cat MODERN SPECIES 241 COX8A (ENSFCAG00000014662) NAA40 (ENSFCAG00000014660) RCOR2 (ENSFCAG00000014656) MARK2 (ENSFCAG00000014652) SPINDOC (ENSFCAG00000014649) CD1H11orf95 (ENSFCAG00000032639) RTN3 (ENSFCAG00000023202) ATL3 (ENSFCAG00000031360) PLAAT3 (ENSFCAG00000001309) PLAAT2 (ENSFCAG00000036450) ENSFCAG00000051640 LGALS12 (ENSFCAG00000014648) PLAAT5 (ENSFCAG00000030094) SLC22A25 (ENSFCAG00000018565) ENSFCAG00000041221 SLC22A8 (ENSFCAG00000005255) #22 SLC22A6 (ENSFCAG00000005247) #23 ENSFCAG00000035000 CHRM1 (ENSFCAG00000000336) #24 SLC3A2 (ENSFCAG00000014781) #25 WDR74 (ENSFCAG00000014780) #26 STX5 (ENSFCAG00000014778) #28 NXF1 (ENSFCAG00000014774) #29 TMEM223 (ENSFCAG00000025098) #30 TMEM179B (ENSFCAG00000014773) #31 TAF6L (ENSFCAG00000022346) #32 POLR2G (ENSFCAG00000026072) #33 ZBTB3 (ENSFCAG00000044175) #34 TTC9C (ENSFCAG00000014768) #35 HNRNPUL2 (ENSFCAG00000014766) #36 ENSFCAG00000035265 #37 Laurasiatheria_c ANCESTRAL SPECIES 20 ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031.d ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 Equus ANCESTRAL SPECIES 11 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000154853.c ENSGT00940000162878.c.a.a ENSGT00940000162878.c.b ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239.n.b #21 ENSGT00940000161239.m.a #21 ENSGT00940000161239.m.b #21 ENSGT00940000161239.n.a #21 ENSGT00940000163667 ENSGT00940000164763 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT00940000157004.a.b.a #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT00700000106100 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486.a #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Horse MODERN SPECIES 3 ENSECAG00000019767 ENSECAG00000031322 ENSECAG00000036003 ENSECAG00000054862 ENSECAG00000038997 ENSECAG00000032959 LGALS12 (ENSECAG00000019637) PLAAT5 (ENSECAG00000019603) ENSECAG00000049087 #21 ENSECAG00000030790 #21 ENSECAG00000055620 ENSECAG00000054899 #21 SLC22A10 (ENSECAG00000014789) SLC22A24 (ENSECAG00000013637) ENSECAG00000018908 #21 SLC22A8 (ENSECAG00000012673) #22 SLC22A6 (ENSECAG00000010602) #23 ENSECAG00000034010 #23 SLC3A2 (ENSECAG00000009822) #25 CHRM1 (ENSECAG00000005493) #24 WDR74 (ENSECAG00000009091) #26 TEX54 (ENSECAG00000028010) STX5 (ENSECAG00000008632) #28 NXF1 (ENSECAG00000001426) #29 TMEM223 (ENSECAG00000001265) #30 TMEM179B (ENSECAG00000001075) #31 TAF6L (ENSECAG00000021482) #32 POLR2G (ENSECAG00000021465) #33 ZBTB3 (ENSECAG00000021457) #34 ENSECAG00000050506 #35 HNRNPUL2 (ENSECAG00000020298) #36 Donkey MODERN SPECIES 8 ATL3 (ENSEASG00005020084) ENSEASG00005020091 PLAAT2 (ENSEASG00005038782) ENSEASG00005030403 ENSEASG00005020110 ENSEASG00005031505 ENSEASG00005020101 LGALS12 (ENSEASG00005026393) ENSEASG00005012059 ENSEASG00005037448 #21 ENSEASG00005037691 #21 ENSEASG00005029445 #21 ENSEASG00005038155 #21 ENSEASG00005011472 SLC22A24 (ENSEASG00005011428) SLC22A8 (ENSEASG00005011414) #22 SLC22A6 (ENSEASG00005011412) #23 ENSEASG00005011406 #23 CHRM1 (ENSEASG00005035508) #24 SLC3A2 (ENSEASG00005011398) #25 WDR74 (ENSEASG00005011378) #26 STX5 (ENSEASG00005011371) #28 NXF1 (ENSEASG00005011368) #29 TMEM223 (ENSEASG00005024604) #30 TMEM179B (ENSEASG00005011364) #31 TAF6L (ENSEASG00005011361) #32 POLR2G (ENSEASG00005011357) #33 ENSEASG00005011353 #34 ENSEASG00005029535 #35 HNRNPUL2 (ENSEASG00005011347) #36 GNG3 (ENSEASG00005026313) #37 Chiroptera ANCESTRAL SPECIES 14 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031.d ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 Microchiroptera ANCESTRAL SPECIES 13 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031.d ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.c ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b.b #23 ENSGT01080000257483 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 Greater horseshoe bat MODERN SPECIES 2 FLRT1 (ENSRFEG00010008949) OTUB1 (ENSRFEG00010008961) COX8A (ENSRFEG00010009021) NAA40 (ENSRFEG00010009063) RCOR2 (ENSRFEG00010009161) MARK2 (ENSRFEG00010009280) SPINDOC (ENSRFEG00010009495) ZFTA (ENSRFEG00010009546) RTN3 (ENSRFEG00010009595) ATL3 (ENSRFEG00010009831) ENSRFEG00010010034 ENSRFEG00010010178 LGALS12 (ENSRFEG00010010237) ENSRFEG00010010520 SLC22A9 (ENSRFEG00010010675) #21 SLC22A8 (ENSRFEG00010010746) #22 SLC22A6 (ENSRFEG00010011255) #23 ENSRFEG00010011298 CHRM1 (ENSRFEG00010011318) #24 SLC3A2 (ENSRFEG00010011338) #25 WDR74 (ENSRFEG00010011575) #26 STX5 (ENSRFEG00010011935) #28 NXF1 (ENSRFEG00010012033) #29 TMEM223 (ENSRFEG00010012090) #30 TMEM179B (ENSRFEG00010012153) #31 TAF6L (ENSRFEG00010012295) #32 POLR2G (ENSRFEG00010012342) #33 ZBTB3 (ENSRFEG00010012397) #34 TTC9C (ENSRFEG00010012416) #35 HNRNPUL2 (ENSRFEG00010012436) #36 GNG3 (ENSRFEG00010012628) #37 Microbat MODERN SPECIES 422 ENSMLUG00000016062 #22 Megabat MODERN SPECIES 2880 SLC22A8 (ENSPVAG00000003508) #22 SLC3A2 (ENSPVAG00000003503) #25 WDR74 (ENSPVAG00000003500) #26 STX5 (ENSPVAG00000003498) #28 NXF1 (ENSPVAG00000003495) #29 TMEM223 (ENSPVAG00000003491) #30 TMEM179B (ENSPVAG00000003490) #31 TAF6L (ENSPVAG00000003486) #32 POLR2G (ENSPVAG00000003481) #33 ZBTB3 (ENSPVAG00000003477) #34 ENSPVAG00000003476 HNRNPUL2 (ENSPVAG00000003475) #36 GNG3 (ENSPVAG00000003474) #37 BSCL2 (ENSPVAG00000003473) LRRN4CL (ENSPVAG00000003472) UBXN1 (ENSPVAG00000003470) Atlantogenata ANCESTRAL SPECIES 17 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162878 ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589.h #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 ENSGT00390000011639.d Afrotheria ANCESTRAL SPECIES 9 ENSGT00940000161450 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589.h #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000165941 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 ENSGT00390000011639.d Afrotheria_a ANCESTRAL SPECIES 9 ENSGT00940000161450 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482.d ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000161499 ENSGT00940000162436 ENSGT00940000161239 #21 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589.h #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000165941 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 ENSGT00390000011639.d Elephant MODERN SPECIES 532 OTUB1 (ENSLAFG00000021422) COX8A (ENSLAFG00000011304) NAA40 (ENSLAFG00000022166) RCOR2 (ENSLAFG00000006094) MARK2 (ENSLAFG00000006072) SPINDOC (ENSLAFG00000030919) ZFTA (ENSLAFG00000020497) RTN3 (ENSLAFG00000018325) ATL3 (ENSLAFG00000018322) PLAAT3 (ENSLAFG00000023290) ENSLAFG00000008426 ENSLAFG00000011733 LGALS12 (ENSLAFG00000002946) PLAAT5 (ENSLAFG00000021958) SLC22A9 (ENSLAFG00000012501) #21 SLC22A8 (ENSLAFG00000004863) #22 SLC22A6 (ENSLAFG00000009174) #23 SLC3A2 (ENSLAFG00000018263) #25 WDR74 (ENSLAFG00000006790) #26 EML3 (ENSLAFG00000009937) STX5 (ENSLAFG00000006788) #28 NXF1 (ENSLAFG00000006778) #29 TMEM223 (ENSLAFG00000023089) #30 TMEM179B (ENSLAFG00000006777) #31 TAF6L (ENSLAFG00000022526) #32 POLR2G (ENSLAFG00000004354) #33 TTC9C (ENSLAFG00000011732) #35 HNRNPUL2 (ENSLAFG00000005377) #36 GNG3 (ENSLAFG00000005381) #37 BSCL2 (ENSLAFG00000030634) UBXN1 (ENSLAFG00000021809) Hyrax MODERN SPECIES 6913 SLC22A8 (ENSPCAG00000001134) #22 SLC22A6 (ENSPCAG00000001050) #23 Tenrec MODERN SPECIES 4402 ENSETEG00000008093 #22 Xenarthra ANCESTRAL SPECIES 58 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.i.a #29 ENSGT00390000012589.h #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 ENSGT00390000011639.d ENSGT00940000162696 Armadillo MODERN SPECIES 576 ENSDNOG00000034059 #23 SLC22A8 (ENSDNOG00000040520) #22 ENSDNOG00000035908 #23 CHRM1 (ENSDNOG00000033696) #24 SLC3A2 (ENSDNOG00000035768) #25 WDR74 (ENSDNOG00000043582) #26 ENSDNOG00000005008 #28 NXF1 (ENSDNOG00000024303) #29 TMEM223 (ENSDNOG00000003066) #30 TMEM179B (ENSDNOG00000045983) #31 ENSDNOG00000031631 #32 POLR2G (ENSDNOG00000043426) #33 ENSDNOG00000012208 ENSDNOG00000043011 #34 TTC9C (ENSDNOG00000006523) #35 HNRNPUL2 (ENSDNOG00000006508) #36 GNG3 (ENSDNOG00000006502) #37 Marsupialia ANCESTRAL SPECIES 12 ENSGT00390000006979.a ENSGT00940000156048.a.a ENSGT00390000006255.b.b ENSGT00940000168159 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162660.b.e.b.g.a ENSGT00940000161499 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.g #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00950000183059.a ENSGT00940000161486 #34 ENSGT00940000161805 #35 Marsupialia_b ANCESTRAL SPECIES 15 ENSGT00390000006979.a ENSGT00940000156048.a.a ENSGT00390000006255.b.b ENSGT00940000168159 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162660.b.e.b.g.a ENSGT00940000161499 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.g #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00950000183059.a ENSGT00940000161486 #34 ENSGT00940000161805 #35 Diprotodontia ANCESTRAL SPECIES 26 ENSGT00940000161450 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00940000156048.a.a ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162660.b.e.b.g.a ENSGT00940000161499 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.g #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Diprotodontia_a ANCESTRAL SPECIES 15 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00940000156048.a.a ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162660.b.e.b.g.a ENSGT00940000162660.b.e.a ENSGT00940000161499 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.g #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 Common wonbat MODERN SPECIES 901 SLC22A8 (ENSVURG00010000539) #22 SLC22A6 (ENSVURG00010000773) #23 ENSVURG00010000838 ##22 ENSVURG00010001279 CHRM1 (ENSVURG00010001286) #24 SLC3A2 (ENSVURG00010001296) #25 WDR74 (ENSVURG00010001367) #26 STX5 (ENSVURG00010001407) #28 ENSVURG00010001446 #29 TMEM223 (ENSVURG00010001486) #30 TMEM179B (ENSVURG00010001496) #31 TAF6L (ENSVURG00010001513) #32 POLR2G (ENSVURG00010001531) #33 TTC9C (ENSVURG00010001583) #35 ENSVURG00010001618 GNG3 (ENSVURG00010001979) #37 koala MODERN SPECIES 179 ENSPCIG00000016937 ENSPCIG00000016936 ENSPCIG00000030061 NAA40 (ENSPCIG00000035706) RCOR2 (ENSPCIG00000015584) MARK2 (ENSPCIG00000015578) SPINDOC (ENSPCIG00000015574) ZFTA (ENSPCIG00000015569) ENSPCIG00000015561 ATL3 (ENSPCIG00000015551) PLAAT3 (ENSPCIG00000031587) ENSPCIG00000015546 ENSPCIG00000015542 LGALS12 (ENSPCIG00000015539) ENSPCIG00000015537 ##23 SLC22A8 (ENSPCIG00000015222) #22 SLC22A6 (ENSPCIG00000015223) #23 ENSPCIG00000017646 ##22 ENSPCIG00000017645 CHRM1 (ENSPCIG00000017643) #24 SLC3A2 (ENSPCIG00000018245) #25 WDR74 (ENSPCIG00000018719) #26 STX5 (ENSPCIG00000018721) #28 ENSPCIG00000015226 #29 TMEM223 (ENSPCIG00000015231) #30 TMEM179B (ENSPCIG00000015233) #31 TAF6L (ENSPCIG00000015237) #32 ENSPCIG00000036190 POLR2G (ENSPCIG00000015245) #33 ZBTB3 (ENSPCIG00000015249) #34 TTC9C (ENSPCIG00000015251) #35 Wallaby MODERN SPECIES 5615 SLC22A8 (ENSMEUG00000001146) #22 Tasmanian devil MODERN SPECIES 5 FLRT1 (ENSSHAG00000023343) OTUB1 (ENSSHAG00000031213) NAA40 (ENSSHAG00000005153) ENSSHAG00000004812 MARK2 (ENSSHAG00000005716) RCOR2 (ENSSHAG00000020586) SPINDOC (ENSSHAG00000006662) ZFTA (ENSSHAG00000022871) ENSSHAG00000021781 ATL3 (ENSSHAG00000002162) ENSSHAG00000020987 ENSSHAG00000022686 LGALS12 (ENSSHAG00000004703) ENSSHAG00000005173 ##23 ENSSHAG00000032003 SLC22A8 (ENSSHAG00000006603) #22 SLC22A6 (ENSSHAG00000007804) #23 ENSSHAG00000022689 ##22 CHRM1 (ENSSHAG00000021922) #24 ENSSHAG00000022006 SLC3A2 (ENSSHAG00000007209) #25 STX5 (ENSSHAG00000024697) #28 WDR74 (ENSSHAG00000026668) #26 ENSSHAG00000006407 #29 TMEM223 (ENSSHAG00000025382) #30 TMEM179B (ENSSHAG00000006311) #31 TAF6L (ENSSHAG00000031966) #32 POLR2G (ENSSHAG00000006006) #33 ENSSHAG00000005891 ZBTB3 (ENSSHAG00000029780) #34 HNRNPUL2 (ENSSHAG00000005445) #36 Amniota DUPLICATION Amniota ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.a ##22 Sauria ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.a ##22 Archelosauria ANCESTRAL SPECIES 38 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028 ENSGT01030000234598.b.b ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157941 ENSGT00940000162373 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00940000157004 #23 ENSGT00620000087966.b ENSGT00940000156764.b ENSGT00940000158249 ENSGT01030000234517.G ENSGT00930000151054 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000155978.b ENSGT01090000260186 ENSGT00940000160483 ENSGT00950000183148.b.a ENSGT00940000157258 ENSGT00940000162250 ENSGT00390000014237 Cryptodira ANCESTRAL SPECIES 17 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028 ENSGT01030000234598.b.b ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157941 ENSGT00940000162373 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00940000157004 #23 ENSGT00620000087966.b ENSGT00940000156764.b ENSGT00940000158249 ENSGT01030000234517.G ENSGT00930000151054 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000162651 ENSGT00940000155978.b ENSGT01090000260186 ENSGT00940000160483 ENSGT00950000183148.b.a ENSGT00940000157258 ENSGT00940000162250 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028.d ENSGT01030000234598.b.b ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157941 ENSGT00940000164485 ENSGT00940000162373 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00940000157004 #23 ENSGT00620000087966.b ENSGT00940000156764.b ENSGT00940000158249 ENSGT01030000234517.G.g.a ENSGT00930000151054 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000162651 ENSGT00940000155978.b ENSGT01090000260186 ENSGT00940000160483 ENSGT00950000183148.b.a ENSGT00940000157258 ENSGT00940000162250 Emydidae ANCESTRAL SPECIES 13 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028.c ENSGT01030000234598.b.b ENSGT00940000154790.a.b ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157941 ENSGT00940000164485 ENSGT00940000162373 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00940000157004 #23 ENSGT00620000087966.b ENSGT00940000156764.b Three-toed box turtle MODERN SPECIES 33 FAU (ENSTMTG00000002567) ZNHIT2 (ENSTMTG00000002573) TM7SF2 (ENSTMTG00000002585) ENSTMTG00000002591 VPS51 (ENSTMTG00000002597) ZFPL1 (ENSTMTG00000002607) ENSTMTG00000002612 ENSTMTG00000002618 SAC3D1 (ENSTMTG00000002623) SNX15 (ENSTMTG00000002628) ARL2 (ENSTMTG00000002634) ENSTMTG00000002640 ENSTMTG00000002643 GPHA2 (ENSTMTG00000002649) PPP2R5B (ENSTMTG00000002653) ENSTMTG00000002660 ##22 ENSTMTG00000002676 #23 ATG2A (ENSTMTG00000002761) ENSTMTG00000002823 ENSTMTG00000002834 EHD1 (ENSTMTG00000002871) CDC42BPG (ENSTMTG00000002953) SCYL1 (ENSTMTG00000003827) FRMD8 (ENSTMTG00000003858) SLC25A45 (ENSTMTG00000003882) TIGD3 (ENSTMTG00000003902) NRXN2 (ENSTMTG00000003926) ENSTMTG00000004089 RASGRP2 (ENSTMTG00000004104) PYGM (ENSTMTG00000004218) SF1 (ENSTMTG00000003098) painted turtle MODERN SPECIES 2386 ZNHIT2 (ENSCPBG00000023638) TM7SF2 (ENSCPBG00000023641) ENSCPBG00000023643 VPS51 (ENSCPBG00000023645) ZFPL1 (ENSCPBG00000023648) CDCA5 (ENSCPBG00000023649) NAALADL1 (ENSCPBG00000023654) ENSCPBG00000023657 SAC3D1 (ENSCPBG00000023660) SNX15 (ENSCPBG00000023662) ARL2 (ENSCPBG00000023664) ENSCPBG00000023666 ENSCPBG00000023667 GPHA2 (ENSCPBG00000023669) PPP2R5B (ENSCPBG00000023672) ENSCPBG00000023677 ##22 ENSCPBG00000023679 #23 ATG2A (ENSCPBG00000023681) ENSCPBG00000023685 ENSCPBG00000023687 EHD1 (ENSCPBG00000023692) ENSCPBG00000023693 ENSCPBG00000023696 ENSCPBG00000023704 SCYL1 (ENSCPBG00000023747) FRMD8 (ENSCPBG00000023753) SLC25A45 (ENSCPBG00000023754) TIGD3 (ENSCPBG00000023755) NRXN2 (ENSCPBG00000023756) ENSCPBG00000023758 ENSCPBG00000023759 Testudinidae ANCESTRAL SPECIES 5 ENSGT00390000007479.`b ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028.d ENSGT01030000234598.b.b ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157941 ENSGT00940000164485 ENSGT00940000162373 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00940000157004.c #23 ENSGT00620000087966.b ENSGT00940000156764.b ENSGT00940000158249 ENSGT01030000234517.G.g.a ENSGT00930000151054 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000162651 ENSGT00940000155978.b ENSGT00940000160483 ENSGT00950000183148.b.a ENSGT00940000157258 ENSGT00940000162250.f ENSGT00940000162250.e Abingdon island giant tortoise MODERN SPECIES 142 ENSCABG00000021398 VPS51 (ENSCABG00000021400) ZFPL1 (ENSCABG00000021403) ENSCABG00000021404 NAALADL1 (ENSCABG00000021408) SAC3D1 (ENSCABG00000021414) SNX15 (ENSCABG00000021417) ARL2 (ENSCABG00000021422) ENSCABG00000021423 ENSCABG00000021424 GPHA2 (ENSCABG00000021427) PPP2R5B (ENSCABG00000021429) ENSCABG00000021430 ##22 ENSCABG00000021431 #23 ATG2A (ENSCABG00000021434) ENSCABG00000021438 ENSCABG00000021439 ENSCABG00000021442 EHD1 (ENSCABG00000021446) ENSCABG00000021449 ENSCABG00000021454 SCYL1 (ENSCABG00000021458) FRMD8 (ENSCABG00000021464) SLC25A45 (ENSCABG00000021471) TIGD3 (ENSCABG00000021472) NRXN2 (ENSCABG00000021473) ENSCABG00000021478 ENSCABG00000021479 Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 2112 SYVN1 (ENSPSIG00000006560) ENSPSIG00000006533 FAU (ENSPSIG00000006273) ZNHIT2 (ENSPSIG00000006244) TM7SF2 (ENSPSIG00000006053) VPS51 (ENSPSIG00000005609) ZFPL1 (ENSPSIG00000005590) CDCA5 (ENSPSIG00000005587) NAALADL1 (ENSPSIG00000015629) SAC3D1 (ENSPSIG00000015519) SNX15 (ENSPSIG00000015265) ARL2 (ENSPSIG00000014976) ENSPSIG00000000636 GPHA2 (ENSPSIG00000014903) PPP2R5B (ENSPSIG00000013331) ENSPSIG00000012309 ##22 ATG2A (ENSPSIG00000009275) ENSPSIG00000008962 ENSPSIG00000006386 EHD1 (ENSPSIG00000005727) CDC42BPG (ENSPSIG00000013101) SCYL1 (ENSPSIG00000012868) SLC25A45 (ENSPSIG00000012132) ENSPSIG00000012127 ENSPSIG00000012113 Chinese turtle MODERN SPECIES 1909 ENSPSIG00000000077 ENSPSIG00000000076 ENSPSIG00000015633 ENSPSIG00000015462 ##22 ENSPSIG00000015443 ENSPSIG00000000075 Archosauria ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.a ##22 Australian saltwater crocodile MODERN SPECIES 7 CDK4 (ENSCPRG00005004033) TSPAN31 (ENSCPRG00005004031) ENSCPRG00005004029 AGAP2 (ENSCPRG00005004018) ENSCPRG00005004014 ENSCPRG00005004008 B4GALNT1 (ENSCPRG00005004004) ENSCPRG00005003983 ENSCPRG00005003979 ENSCPRG00005003977 ENSCPRG00005003921 ENSCPRG00005003898 ENSCPRG00005003894 NAALADL1 (ENSCPRG00005003868) ENSCPRG00005003856 ENSCPRG00005003850 ##22 ENSCPRG00005003846 ENSCPRG00005003843 ENSCPRG00005003840 ENSCPRG00005003835 ENSCPRG00005003825 RACGAP1 (ENSCPRG00005003815) ASIC1 (ENSCPRG00005003809) ENSCPRG00005003759 SMARCD1 (ENSCPRG00005003631) GPD1 (ENSCPRG00005003613) ENSCPRG00005003610 CERS5 (ENSCPRG00005003606) LIMA1 (ENSCPRG00005003602) LARP4 (ENSCPRG00005003596) DIP2B (ENSCPRG00005002292) Lepidosauria ANCESTRAL SPECIES 107 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00620000087966.b ENSGT00940000158249 ENSGT01030000234517.G ENSGT00930000151054 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000155978.b ENSGT01090000260186 ENSGT00940000160483 ENSGT00950000183148.b.a ENSGT00940000157258 ENSGT00940000162250 ENSGT00390000014237 ENSGT00940000160285 ENSGT00940000160644 Episquamata ANCESTRAL SPECIES 28 ENSGT00390000007552 ENSGT00940000154902 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00620000087966.b ENSGT00940000158249 ENSGT01030000234517.G ENSGT00930000151054 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000155978.b ENSGT01090000260186 ENSGT00940000160483 ENSGT00950000183148.b.a ENSGT00940000157258 ENSGT00940000162250 ENSGT00390000014237 ENSGT00940000160285 ENSGT00940000160644 Toxicofera ANCESTRAL SPECIES 78 ENSGT00390000007552 ENSGT00940000154902 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00620000087966.b ENSGT00940000168352 Elapidae ANCESTRAL SPECIES 55 ENSGT00390000009753 ENSGT00390000001738 ENSGT00940000162464 ENSGT00390000000417.a.a.b.a.a.b ENSGT00390000017147 ENSGT00390000007479 ENSGT00390000017253 ENSGT00390000007552 ENSGT00940000154902 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00620000087966.b ENSGT00940000168352 Elapidae_a ANCESTRAL SPECIES 119 ENSGT00390000009753 ENSGT00390000001738 ENSGT00940000162464 ENSGT00390000000417.a.a.b.a.a.b ENSGT00390000017147 ENSGT00390000007479 ENSGT00390000017253 ENSGT00390000007552 ENSGT00940000154902 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00620000087966.b ENSGT00940000168352 Acanthophiinae ANCESTRAL SPECIES 111 ENSGT00390000009753 ENSGT00390000001738 ENSGT00940000162464 ENSGT00390000000417.a.a.b.a.a.b ENSGT00390000017147 ENSGT00390000007479 ENSGT00390000017253 ENSGT00390000007552 ENSGT00940000154902 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00620000087966.b ENSGT00940000168352 Eastern brown snake MODERN SPECIES 96 ENSPTXG00000016544 TM7SF2 (ENSPTXG00000016535) ZNHIT2 (ENSPTXG00000016529) FAU (ENSPTXG00000016527) MRPL49 (ENSPTXG00000016524) ENSPTXG00000016522 ENSPTXG00000016521 ENSPTXG00000016519 ENSPTXG00000016515 SAC3D1 (ENSPTXG00000016512) ARL2 (ENSPTXG00000016510) SNX15 (ENSPTXG00000016507) ENSPTXG00000016505 GPHA2 (ENSPTXG00000016503) PPP2R5B (ENSPTXG00000016501) ENSPTXG00000016498 ##22 ATG2A (ENSPTXG00000016494) ENSPTXG00000016490 ENSPTXG00000016488 PC (ENSPTXG00000016469) ENSPTXG00000016468 ENSPTXG00000016467 HAPLN2 (ENSPTXG00000016465) RHBG (ENSPTXG00000016463) MEF2D (ENSPTXG00000016452) IQGAP3 (ENSPTXG00000016444) UBQLN4 (ENSPTXG00000016442) LAMTOR2 (ENSPTXG00000016441) RAB25 (ENSPTXG00000016440) ENSPTXG00000016439 ENSPTXG00000016437 Mainland tiger snake MODERN SPECIES 265 ENSNSUG00000000343 GPHA2 (ENSNSUG00000000347) PPP2R5B (ENSNSUG00000000357) ENSNSUG00000002041 ##22 ATG2A (ENSNSUG00000002057) ENSNSUG00000002120 PC (ENSNSUG00000002123) ENSNSUG00000002208 ENSNSUG00000002213 ENSNSUG00000002214 HAPLN2 (ENSNSUG00000002218) RHBG (ENSNSUG00000002224) MEF2D (ENSNSUG00000002226) ENSNSUG00000002233 ENSNSUG00000002240 NAXE (ENSNSUG00000002248) UBQLN4 (ENSNSUG00000002251) LAMTOR2 (ENSNSUG00000002262) ENSNSUG00000002265 Blue-lipped sea krait MODERN SPECIES 4108 GPHA2 (ENSLLTG00000002279) PPP2R5B (ENSLLTG00000002269) ENSLLTG00000002264 ##22 Lizard MODERN SPECIES 1816 ENSACAG00000045224 ENSACAG00000008091 ##22 Laterata ANCESTRAL SPECIES 60 ENSGT00390000007552 ENSGT00940000154902 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ##22 ENSGT00620000087966.b ENSGT00940000158249 ENSGT01030000234517.G ENSGT00930000151054 ENSGT00390000003837 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000155978.b ENSGT01090000260186 ENSGT00940000160483 ENSGT00950000183148.b.a ENSGT00940000157258 ENSGT00940000162250 ENSGT00390000017253 ENSGT00390000007479 Common wall lizard MODERN SPECIES 7 GLMP (ENSPMRG00000018637) CCT3 (ENSPMRG00000018628) ENSPMRG00000018624 SSR2 (ENSPMRG00000018621) CST6 (ENSPMRG00000018614) NAALADL1 (ENSPMRG00000018264) EEF1G (ENSPMRG00000018217) ENSPMRG00000018212 AHNAK (ENSPMRG00000018207) SAC3D1 (ENSPMRG00000018206) ARL2 (ENSPMRG00000018200) SNX15 (ENSPMRG00000018184) ENSPMRG00000018172 ENSPMRG00000018169 PPP2R5B (ENSPMRG00000018160) ENSPMRG00000018145 ##22 ATG2A (ENSPMRG00000018117) EHD1 (ENSPMRG00000018098) CDC42BPG (ENSPMRG00000016721) SCYL1 (ENSPMRG00000016541) ENSPMRG00000016533 ENSPMRG00000016527 ENSPMRG00000016509 FRMD8 (ENSPMRG00000016497) SLC25A45 (ENSPMRG00000016486) NRXN2 (ENSPMRG00000016063) RASGRP2 (ENSPMRG00000015942) ENSPMRG00000015931 PYGM (ENSPMRG00000015911) SF1 (ENSPMRG00000015892) MAP4K2 (ENSPMRG00000015521) Amniota DUPLICATION Amniota DUPLICATION Amniota ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.b.a.a ##22 Sauria ANCESTRAL SPECIES 40 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 Lepidosauria ANCESTRAL SPECIES 87 ENSGT00390000015815 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00940000163054.b ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 tuatara DUPLICATION tuatara MODERN SPECIES 1099 ENSSPUG00000000486 ENSSPUG00000000492 ENSSPUG00000000496 ENSSPUG00000000512 ENSSPUG00000000523 ENSSPUG00000000529 ENSSPUG00000000539 ENSSPUG00000000549 ENSSPUG00000000562 SYVN1 (ENSSPUG00000000566) CAPN1 (ENSSPUG00000000579) ENSSPUG00000000587 ENSSPUG00000000600 ENSSPUG00000000606 AP5B1 (ENSSPUG00000000608) ENSSPUG00000000637 ##22 ENSSPUG00000000660 ##22 ENSSPUG00000000702 ##22 ENSSPUG00000000706 ##22 ENSSPUG00000000714 ##22 DPF2 (ENSSPUG00000000759) POLA2 (ENSSPUG00000000790) ENSSPUG00000000842 KAT5 (ENSSPUG00000000847) ENSSPUG00000000958 ENSSPUG00000000963 CRABP2 (ENSSPUG00000000974) ISG20L2 (ENSSPUG00000000985) MRPL24 (ENSSPUG00000001037) HDGF (ENSSPUG00000001042) PRCC (ENSSPUG00000001049) tuatara DUPLICATION tuatara MODERN SPECIES 1099 ENSSPUG00000000512 ENSSPUG00000000523 ENSSPUG00000000529 ENSSPUG00000000539 ENSSPUG00000000549 ENSSPUG00000000562 SYVN1 (ENSSPUG00000000566) CAPN1 (ENSSPUG00000000579) ENSSPUG00000000587 ENSSPUG00000000600 ENSSPUG00000000606 AP5B1 (ENSSPUG00000000608) ENSSPUG00000000637 ##22 ENSSPUG00000000660 ##22 ENSSPUG00000000702 ##22 ENSSPUG00000000706 ##22 ENSSPUG00000000714 ##22 DPF2 (ENSSPUG00000000759) POLA2 (ENSSPUG00000000790) ENSSPUG00000000842 KAT5 (ENSSPUG00000000847) ENSSPUG00000000958 ENSSPUG00000000963 CRABP2 (ENSSPUG00000000974) ISG20L2 (ENSSPUG00000000985) MRPL24 (ENSSPUG00000001037) HDGF (ENSSPUG00000001042) PRCC (ENSSPUG00000001049) SH2D2A (ENSSPUG00000001057) ENSSPUG00000001082 NTRK1 (ENSSPUG00000001153) tuatara MODERN SPECIES 1099 ENSSPUG00000000496 ENSSPUG00000000512 ENSSPUG00000000523 ENSSPUG00000000529 ENSSPUG00000000539 ENSSPUG00000000549 ENSSPUG00000000562 SYVN1 (ENSSPUG00000000566) CAPN1 (ENSSPUG00000000579) ENSSPUG00000000587 ENSSPUG00000000600 ENSSPUG00000000606 AP5B1 (ENSSPUG00000000608) ENSSPUG00000000637 ##22 ENSSPUG00000000660 ##22 ENSSPUG00000000702 ##22 ENSSPUG00000000706 ##22 ENSSPUG00000000714 ##22 DPF2 (ENSSPUG00000000759) POLA2 (ENSSPUG00000000790) ENSSPUG00000000842 KAT5 (ENSSPUG00000000847) ENSSPUG00000000958 ENSSPUG00000000963 CRABP2 (ENSSPUG00000000974) ISG20L2 (ENSSPUG00000000985) MRPL24 (ENSSPUG00000001037) HDGF (ENSSPUG00000001042) PRCC (ENSSPUG00000001049) SH2D2A (ENSSPUG00000001057) ENSSPUG00000001082 Episquamata ANCESTRAL SPECIES 19 ENSGT00940000159437 ENSGT00390000015815 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01100000263573.b.b ENSGT01030000234540.C ENSGT00940000161712.a Laterata ANCESTRAL SPECIES 62 ENSGT00940000162317 ENSGT00940000160034 ENSGT00550000074954 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00940000154556 ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000163054.b ENSGT00960000189006 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 Common wall lizard MODERN SPECIES 7 DPP3 (ENSPMRG00000015191) BBS1 (ENSPMRG00000015200) ENSPMRG00000015208 ENSPMRG00000015216 FOSL1 (ENSPMRG00000015223) CCDC85B (ENSPMRG00000015226) FIBP (ENSPMRG00000015231) EFEMP2 (ENSPMRG00000015236) MUS81 (ENSPMRG00000015240) ENSPMRG00000015247 ENSPMRG00000015252 CFL1 (ENSPMRG00000015255) CD248 (ENSPMRG00000015263) AP5B1 (ENSPMRG00000015266) OVOL1 (ENSPMRG00000015270) ENSPMRG00000015277 ##22 ENSPMRG00000015281 ##22 ENSPMRG00000015284 ##22 ENSPMRG00000015298 ##22 ENSPMRG00000015308 ##22 CHRM1 (ENSPMRG00000015315) #24 DPF2 (ENSPMRG00000015322) CDC42EP2 (ENSPMRG00000015335) POLA2 (ENSPMRG00000015344) ENSPMRG00000015363 CDCA5 (ENSPMRG00000015393) ZFPL1 (ENSPMRG00000015397) VPS51 (ENSPMRG00000015399) ENSPMRG00000015412 TM7SF2 (ENSPMRG00000015418) ZNHIT2 (ENSPMRG00000015430) Argentine black and white tegu MODERN SPECIES 80 CCDC85B (ENSSMRG00000020376) FOSL1 (ENSSMRG00000020375) ENSSMRG00000020374 ENSSMRG00000020372 BBS1 (ENSSMRG00000020371) DPP3 (ENSSMRG00000020370) PELI3 (ENSSMRG00000020369) ENSSMRG00000020368 DRAP1 (ENSSMRG00000020367) C11orf68 (ENSSMRG00000020366) ENSSMRG00000020365 RELA (ENSSMRG00000020364) ENSSMRG00000020363 AP5B1 (ENSSMRG00000020362) OVOL1 (ENSSMRG00000020361) ENSSMRG00000020360 ##22 ENSSMRG00000020359 ##22 ENSSMRG00000020358 ##22 ENSSMRG00000020357 ##22 CHRM1 (ENSSMRG00000020355) #24 DPF2 (ENSSMRG00000020354) POLA2 (ENSSMRG00000020352) RBM14 (ENSSMRG00000020351) CCS (ENSSMRG00000020350) ENSSMRG00000020349 ENSSMRG00000020348 SPTBN2 (ENSSMRG00000020347) ENSSMRG00000020346 RCE1 (ENSSMRG00000020343) ACTN3 (ENSSMRG00000020342) ENSSMRG00000020340 Toxicofera ANCESTRAL SPECIES 28 ENSGT00940000159437 ENSGT00390000015815 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 Elapidae ANCESTRAL SPECIES 27 ENSGT00940000159437 ENSGT00390000015815 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 Elapidae_a ANCESTRAL SPECIES 43 ENSGT00940000159437 ENSGT00390000015815 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00390000005498 ENSGT00940000159437 ENSGT00390000015815 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Mainland tiger snake MODERN SPECIES 731 ENSNSUG00000000936 ENSNSUG00000000934 AP5B1 (ENSNSUG00000000920) OVOL1 (ENSNSUG00000000919) ENSNSUG00000000787 ##22 Eastern brown snake MODERN SPECIES 85 ENSPTXG00000010978 EFEMP2 (ENSPTXG00000010977) FIBP (ENSPTXG00000010975) ENSPTXG00000010974 FOSL1 (ENSPTXG00000010973) BBS1 (ENSPTXG00000010881) ENSPTXG00000010872 DPP3 (ENSPTXG00000010869) PELI3 (ENSPTXG00000010866) DRAP1 (ENSPTXG00000010864) C11orf68 (ENSPTXG00000010863) RELA (ENSPTXG00000010343) KAT5 (ENSPTXG00000010339) ENSPTXG00000010338 AP5B1 (ENSPTXG00000010337) ENSPTXG00000010336 ##22 ENSPTXG00000010331 ##22 ENSPTXG00000010225 ##22 ENSPTXG00000010206 ##22 ENSPTXG00000010123 ##22 DPF2 (ENSPTXG00000010121) CDC42EP2 (ENSPTXG00000010120) ENSPTXG00000010119 CAPN1 (ENSPTXG00000010118) SPDYC (ENSPTXG00000010117) SYVN1 (ENSPTXG00000010116) SLAMF8 (ENSPTXG00000010114) CFAP45 (ENSPTXG00000010113) ENSPTXG00000010112 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010091 Blue-lipped sea krait MODERN SPECIES 5737 OVOL1 (ENSLLTG00000015715) ENSLLTG00000015730 ##22 ENSLLTG00000015771 ##22 ENSLLTG00000003127 ##22 TAGLN2 (ENSLLTG00000003142) CFAP45 (ENSLLTG00000003162) ENSLLTG00000003175 ENSLLTG00000003185 SLAMF8 (ENSLLTG00000003209) SYVN1 (ENSLLTG00000003234) SPDYC (ENSLLTG00000003290) CAPN1 (ENSLLTG00000003332) ENSLLTG00000003375 Indian cobra MODERN SPECIES 17 FOSL1 (ENSNNAG00000016109) CTSW (ENSNNAG00000016157) ENSNNAG00000016168 ENSNNAG00000016176 ENSNNAG00000003873 DPP3 (ENSNNAG00000003999) PELI3 (ENSNNAG00000004868) ENSNNAG00000004888 ENSNNAG00000004908 C11orf68 (ENSNNAG00000004981) RELA (ENSNNAG00000004992) ENSNNAG00000005022 ENSNNAG00000005042 AP5B1 (ENSNNAG00000005057) OVOL1 (ENSNNAG00000005073) ENSNNAG00000005118 ##22 ENSNNAG00000005405 ##22 ENSNNAG00000005756 ##22 ENSNNAG00000006165 ##22 ENSNNAG00000006513 ##22 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) Lizard DUPLICATION Lizard MODERN SPECIES 1278 ENSACAG00000022853 ENSACAG00000027251 ENSACAG00000035268 ENSACAG00000040978 ENSACAG00000013956 ##22 ENSACAG00000045200 ENSACAG00000044737 Lizard DUPLICATION Lizard MODERN SPECIES 1861 ENSACAG00000006309 ENSACAG00000026822 ##22 ENSACAG00000031439 ##22 Lizard MODERN SPECIES 193 ENSACAG00000006380 ##22 ENSACAG00000040271 ##22 Archelosauria ANCESTRAL SPECIES 38 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b Archosauria ANCESTRAL SPECIES 76 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000008975 #33 ENSGT00390000007552 ENSGT00940000154902 Aves ANCESTRAL SPECIES 70 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000008975 #33 ENSGT00390000007552 ENSGT00940000154902 African ostrich MODERN SPECIES 508 ENSSCUG00000006058 ##22 SLC22A8 (ENSSCUG00000006061) ##22 ENSSCUG00000006066 ENSSCUG00000006068 POLA2 (ENSSCUG00000006069) ENSSCUG00000006073 SPDYC (ENSSCUG00000006075) SYVN1 (ENSSCUG00000006078) Neognathae ANCESTRAL SPECIES 46 ENSGT00940000154911 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00980000200147 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000162343 ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 Neognathae_b ANCESTRAL SPECIES 39 ENSGT00940000160376 #36 ENSGT00390000012589 #30 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00980000200147 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000006979.a ENSGT00940000159375 ENSGT00940000154911 ENSGT00390000013444.a.b.b ENSGT00390000002731 ENSGT00930000151054 Passeriformes ANCESTRAL SPECIES 43 ENSGT01100000263497.B #37 ENSGT00940000160376 #36 ENSGT00390000012589 #30 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #32 ENSGT00390000006979.a ENSGT00940000159375 ENSGT00940000154911 Passeriformes_d ANCESTRAL SPECIES 38 ENSGT01100000263497.B #37 ENSGT00940000160376 #36 ENSGT00390000012589 #30 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #32 ENSGT00390000006979.a ENSGT00940000159375 ENSGT00940000154911 Passeriformes_g ANCESTRAL SPECIES 44 ENSGT01100000263497.B #37 ENSGT00940000160376 #36 ENSGT00390000012589 #30 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #32 ENSGT00390000006979.a ENSGT00940000159375 ENSGT00940000154911 Medium ground finch MODERN SPECIES 435 ENSGFOG00000013454 ##22 ENSGFOG00000013435 ##22 DPF2 (ENSGFOG00000013426) CDC42EP2 (ENSGFOG00000013422) POLA2 (ENSGFOG00000013415) CAPN1 (ENSGFOG00000013412) SYVN1 (ENSGFOG00000013408) Passeroidea ANCESTRAL SPECIES 54 ENSGT01100000263497.B #37 ENSGT00940000160376 #36 ENSGT00390000012589 #30 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070.c Zebra finch MODERN SPECIES 38 ENSTGUG00000024709 #30 ENSTGUG00000027721 #29 ENSTGUG00000025536 ENSTGUG00000024672 ENSTGUG00000025402 ENSTGUG00000019144 ENSTGUG00000023367 ENSTGUG00000018975 ENSTGUG00000026804 ENSTGUG00000021779 ENSTGUG00000028550 ENSTGUG00000024470 ENSTGUG00000029491 ENSTGUG00000023063 ENSTGUG00000028070 ENSTGUG00000026404 ##22 ENSTGUG00000020056 ##22 ENSTGUG00000022802 ##22 ENSTGUG00000025700 ENSTGUG00000028595 ENSTGUG00000024413 ENSTGUG00000028151 MRPL49 (ENSTGUG00000021342) ENSTGUG00000016038 ENSTGUG00000027373 ENSTGUG00000026586 ENSTGUG00000019970 ENSTGUG00000021341 ENSTGUG00000020752 ENSTGUG00000016898 OTUB1 (ENSTGUG00000025728) Common canary DUPLICATION Common canary MODERN SPECIES 12 IGDCC4 (ENSSCAG00000010185) DPP8 (ENSSCAG00000010189) HACD3 (ENSSCAG00000010199) INTS14 (ENSSCAG00000010200) SLC24A1 (ENSSCAG00000010206) DENND4A (ENSSCAG00000010214) RAB11A (ENSSCAG00000010226) MEGF11 (ENSSCAG00000010255) DIS3L (ENSSCAG00000010324) TIPIN (ENSSCAG00000010328) MAP2K1 (ENSSCAG00000010333) ENSSCAG00000010341 RPL4 (ENSSCAG00000010344) ZWILCH (ENSSCAG00000010364) LCTL (ENSSCAG00000010374) ENSSCAG00000010394 ##22 ENSSCAG00000010404 ##22 SMAD6 (ENSSCAG00000010407) SMAD3 (ENSSCAG00000010414) AAGAB (ENSSCAG00000010418) IQCH (ENSSCAG00000010432) ENSSCAG00000010438 MAP2K5 (ENSSCAG00000010448) PIAS1 (ENSSCAG00000010481) CALML4 (ENSSCAG00000010490) ENSSCAG00000010493 ENSSCAG00000010498 ENSSCAG00000010505 ITGA11 (ENSSCAG00000010528) CORO2B (ENSSCAG00000010620) ENSSCAG00000010637 Common canary MODERN SPECIES 12 DPP8 (ENSSCAG00000010189) HACD3 (ENSSCAG00000010199) INTS14 (ENSSCAG00000010200) SLC24A1 (ENSSCAG00000010206) DENND4A (ENSSCAG00000010214) RAB11A (ENSSCAG00000010226) MEGF11 (ENSSCAG00000010255) DIS3L (ENSSCAG00000010324) TIPIN (ENSSCAG00000010328) MAP2K1 (ENSSCAG00000010333) ENSSCAG00000010341 RPL4 (ENSSCAG00000010344) ZWILCH (ENSSCAG00000010364) LCTL (ENSSCAG00000010374) ENSSCAG00000010394 ##22 ENSSCAG00000010404 ##22 SMAD6 (ENSSCAG00000010407) SMAD3 (ENSSCAG00000010414) AAGAB (ENSSCAG00000010418) IQCH (ENSSCAG00000010432) ENSSCAG00000010438 MAP2K5 (ENSSCAG00000010448) PIAS1 (ENSSCAG00000010481) CALML4 (ENSSCAG00000010490) ENSSCAG00000010493 ENSSCAG00000010498 ENSSCAG00000010505 ITGA11 (ENSSCAG00000010528) CORO2B (ENSSCAG00000010620) ENSSCAG00000010637 NOX5 (ENSSCAG00000010650) Neognathae_c ANCESTRAL SPECIES 47 ENSGT00960000192922 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479.cb ENSGT00390000015119 #26 Golden eagle MODERN SPECIES 63 ENSACCG00020016957 DRAP1 (ENSACCG00020012253) ENSACCG00020012269 ##22 ENSACCG00020012301 ##22 ENSACCG00020012339 ##22 DPF2 (ENSACCG00020012404) CDC42EP2 (ENSACCG00020012469) POLA2 (ENSACCG00020012493) CAPN1 (ENSACCG00020012546) SPDYC (ENSACCG00020012590) SYVN1 (ENSACCG00020012628) ENSACCG00020012688 Kakapo MODERN SPECIES 75 HSD17B10 (ENSSHBG00005008270) PFKFB1 (ENSSHBG00005008286) ENSSHBG00005008296 GNL3L (ENSSHBG00005008311) HUWE1 (ENSSHBG00005009089) NDUFB11 (ENSSHBG00005019046) RBM10 (ENSSHBG00005019052) ENSSHBG00005019288 ENSSHBG00005019289 ENSSHBG00005019291 CDK16 (ENSSHBG00005019294) ENSSHBG00005019295 ENSSHBG00005019297 RELA (ENSSHBG00005019302) DRAP1 (ENSSHBG00005019305) ENSSHBG00005019307 ##22 ENSSHBG00005019310 ##22 ENSSHBG00005019314 DPF2 (ENSSHBG00005019320) CDC42EP2 (ENSSHBG00005019329) POLA2 (ENSSHBG00005019332) CAPN1 (ENSSHBG00005019338) SYVN1 (ENSSHBG00005019344) ENSSHBG00005019348 MRPL49 (ENSSHBG00005019350) FAU (ENSSHBG00005019353) WDR74 (ENSSHBG00005019356) #26 INTS5 (ENSSHBG00005019375) POLR2G (ENSSHBG00005019378) #33 EEF1G (ENSSHBG00005019380) AHNAK (ENSSHBG00005019382) Galloanserae ANCESTRAL SPECIES 61 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 Phasianidae ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.b.a.a ##22 Phasianidae_b ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.b.a.a ##22 Chicken MODERN SPECIES 63 ENSGALG00010000144 ENSGALG00010000142 ##22 ENSGALG00010000178 ENSGALG00010000175 ##22 DPF2 (ENSGALG00010000171) CDC42EP2 (ENSGALG00010000161) B3GAT3 (ENSGALG00010000150) ENSGALG00010000149 Anatidae ANCESTRAL SPECIES 122 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000161776 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 Pink-footed goose MODERN SPECIES 506 ENSABRG00000011027 ##22 ENSABRG00000011145 ##22 ENSABRG00000011151 ##22 CDC42EP2 (ENSABRG00000000210) CAPN1 (ENSABRG00000000253) SPDYC (ENSABRG00000000377) SYVN1 (ENSABRG00000000386) Duck MODERN SPECIES 561 ENSAPLG00000013770 ##22 Cryptodira ANCESTRAL SPECIES 17 ENSGT00390000006979.a ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 2112 LGALS12 (ENSPSIG00000012610) ENSPSIG00000012542 ##22 ENSPSIG00000012508 ##22 ENSPSIG00000012485 ##22 ENSPSIG00000011590 ##22 ENSPSIG00000011491 ##22 CHRM1 (ENSPSIG00000000656) #24 DPF2 (ENSPSIG00000010805) CDC42EP2 (ENSPSIG00000000649) POLA2 (ENSPSIG00000010575) CAPN1 (ENSPSIG00000008053) SPDYC (ENSPSIG00000007826) SYVN1 (ENSPSIG00000006560) ENSPSIG00000006533 FAU (ENSPSIG00000006273) ZNHIT2 (ENSPSIG00000006244) TM7SF2 (ENSPSIG00000006053) VPS51 (ENSPSIG00000005609) Chinese turtle MODERN SPECIES 2112 LGALS12 (ENSPSIG00000012610) ENSPSIG00000012542 ##22 ENSPSIG00000012508 ##22 ENSPSIG00000012485 ##22 ENSPSIG00000011590 ##22 ENSPSIG00000011491 ##22 CHRM1 (ENSPSIG00000000656) #24 DPF2 (ENSPSIG00000010805) CDC42EP2 (ENSPSIG00000000649) POLA2 (ENSPSIG00000010575) CAPN1 (ENSPSIG00000008053) SPDYC (ENSPSIG00000007826) SYVN1 (ENSPSIG00000006560) ENSPSIG00000006533 FAU (ENSPSIG00000006273) ZNHIT2 (ENSPSIG00000006244) TM7SF2 (ENSPSIG00000006053) Testudinoidea ANCESTRAL SPECIES 2 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b Testudinidae ANCESTRAL SPECIES 5 ENSGT01020000231208 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479.`b ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b Goode s thornscrub tortoise MODERN SPECIES 21 NAA40 (ENSGEVG00005012468) RCOR2 (ENSGEVG00005012299) MARK2 (ENSGEVG00005012049) ENSGEVG00005011921 ENSGEVG00005011885 ZFTA (ENSGEVG00005011808) ENSGEVG00005011707 ATL3 (ENSGEVG00005011679) ENSGEVG00005011654 ENSGEVG00005011526 ENSGEVG00005011491 ENSGEVG00005011390 ENSGEVG00005011291 ENSGEVG00005011225 LGALS12 (ENSGEVG00005011151) ENSGEVG00005010707 ##22 ENSGEVG00005010042 ##22 ENSGEVG00005009473 ##22 ENSGEVG00005008720 ##22 CHRM1 (ENSGEVG00005008602) #24 DPF2 (ENSGEVG00005008558) CDC42EP2 (ENSGEVG00005008521) POLA2 (ENSGEVG00005008496) CAPN1 (ENSGEVG00005008420) SPDYC (ENSGEVG00005008396) SYVN1 (ENSGEVG00005008363) ENSGEVG00005008319 MRPL49 (ENSGEVG00005008293) ENSGEVG00005008268 ZNHIT2 (ENSGEVG00005008244) TM7SF2 (ENSGEVG00005008228) Abingdon island giant tortoise MODERN SPECIES 2278 RCOR2 (ENSCABG00000000704) MARK2 (ENSCABG00000000715) ENSCABG00000000726 ENSCABG00000000734 ZFTA (ENSCABG00000000736) ENSCABG00000000737 ATL3 (ENSCABG00000000739) ENSCABG00000000740 ENSCABG00000000743 ENSCABG00000000745 ENSCABG00000000747 ENSCABG00000000756 ENSCABG00000000809 LGALS12 (ENSCABG00000000816) ENSCABG00000000918 ENSCABG00000000934 ##22 ENSCABG00000001060 ##22 ENSCABG00000001301 ##22 ENSCABG00000001338 ##22 ENSCABG00000001482 ##22 CHRM1 (ENSCABG00000001601) #24 DPF2 (ENSCABG00000001614) CDC42EP2 (ENSCABG00000001686) POLA2 (ENSCABG00000001701) CAPN1 (ENSCABG00000001957) SPDYC (ENSCABG00000002961) SYVN1 (ENSCABG00000002965) ENSCABG00000002969 MRPL49 (ENSCABG00000002973) FAU (ENSCABG00000002974) ZNHIT2 (ENSCABG00000002976) Emydidae DUPLICATION Emydidae DUPLICATION Emydidae ANCESTRAL SPECIES 13 ENSGT01020000231208 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a.i.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.a.a.i.b ##22 ENSGT00940000154901.C.b.f.b.a.a.j ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 painted turtle DUPLICATION painted turtle DUPLICATION painted turtle DUPLICATION painted turtle MODERN SPECIES 1835 ENSCPBG00000009484 ##22 painted turtle MODERN SPECIES 1123 ENSCPBG00000018749 ##22 ENSCPBG00000018748 ##22 ENSCPBG00000018746 ##22 ENSCPBG00000018744 ##22 ENSCPBG00000018740 ##22 ENSCPBG00000018738 ##22 painted turtle MODERN SPECIES 1123 ENSCPBG00000018749 ##22 ENSCPBG00000018748 ##22 ENSCPBG00000018746 ##22 ENSCPBG00000018744 ##22 ENSCPBG00000018740 ##22 ENSCPBG00000018738 ##22 painted turtle MODERN SPECIES 2386 ENSCPBG00000023503 NAA40 (ENSCPBG00000023507) RCOR2 (ENSCPBG00000023509) MARK2 (ENSCPBG00000023513) ENSCPBG00000023518 ENSCPBG00000023519 ZFTA (ENSCPBG00000023522) ENSCPBG00000023525 ATL3 (ENSCPBG00000023529) ENSCPBG00000023531 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) Emydidae ANCESTRAL SPECIES 13 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a.i.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.a.a.i.b ##22 ENSGT00940000154901.C.b.f.b.a.a.j ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b Three-toed box turtle MODERN SPECIES 2269 ENSTMTG00000012843 ##22 painted turtle MODERN SPECIES 2386 ENSCPBG00000023519 ZFTA (ENSCPBG00000023522) ENSCPBG00000023525 ATL3 (ENSCPBG00000023529) ENSCPBG00000023531 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 FAU (ENSCPBG00000023637) ZNHIT2 (ENSCPBG00000023638) TM7SF2 (ENSCPBG00000023641) Emydidae ANCESTRAL SPECIES 13 ENSGT00940000155031 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a.i.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.a.a.i.b ##22 ENSGT00940000154901.C.b.f.b.a.a.j ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 Three-toed box turtle MODERN SPECIES 33 ENSTMTG00000002032 NAA40 (ENSTMTG00000002041) RCOR2 (ENSTMTG00000002058) MARK2 (ENSTMTG00000002082) ENSTMTG00000002131 ENSTMTG00000002140 ZFTA (ENSTMTG00000002149) ENSTMTG00000002155 ATL3 (ENSTMTG00000002166) ENSTMTG00000002174 ENSTMTG00000002196 ENSTMTG00000002243 ENSTMTG00000002253 ENSTMTG00000002262 LGALS12 (ENSTMTG00000002278) ENSTMTG00000002287 ##22 ENSTMTG00000002299 ##22 ENSTMTG00000002322 ##22 ENSTMTG00000002391 ##22 CHRM1 (ENSTMTG00000002487) #24 DPF2 (ENSTMTG00000002493) CDC42EP2 (ENSTMTG00000002496) POLA2 (ENSTMTG00000002499) CAPN1 (ENSTMTG00000002515) SPDYC (ENSTMTG00000002540) SYVN1 (ENSTMTG00000002548) ENSTMTG00000002555 MRPL49 (ENSTMTG00000002564) FAU (ENSTMTG00000002567) ZNHIT2 (ENSTMTG00000002573) TM7SF2 (ENSTMTG00000002585) painted turtle MODERN SPECIES 1320 ENSCPBG00000000765 ##22 ENSCPBG00000000637 ##22 Amniota ANCESTRAL SPECIES 67 ENSGT00940000160034 ENSGT00940000162317 ENSGT00390000015815 ENSGT00940000159437 ENSGT00390000005498 ENSGT00950000183000.c.a.a ENSGT00940000162773 ENSGT00940000161363 ENSGT00530000064721 ENSGT00940000162343 ENSGT00940000159867 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00390000001738 ENSGT00390000009753 ENSGT01070000254712 Sauria ANCESTRAL SPECIES 40 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 Lepidosauria ANCESTRAL SPECIES 87 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00940000163054.b ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 Episquamata ANCESTRAL SPECIES 19 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01100000263573.b.b ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Laterata ANCESTRAL SPECIES 62 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00940000154556 ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000163054.b ENSGT00960000189006 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 Argentine black and white tegu MODERN SPECIES 80 ENSSMRG00000020372 BBS1 (ENSSMRG00000020371) DPP3 (ENSSMRG00000020370) PELI3 (ENSSMRG00000020369) ENSSMRG00000020368 DRAP1 (ENSSMRG00000020367) C11orf68 (ENSSMRG00000020366) ENSSMRG00000020365 RELA (ENSSMRG00000020364) ENSSMRG00000020363 AP5B1 (ENSSMRG00000020362) OVOL1 (ENSSMRG00000020361) ENSSMRG00000020360 ##22 ENSSMRG00000020359 ##22 ENSSMRG00000020358 ##22 ENSSMRG00000020357 ##22 CHRM1 (ENSSMRG00000020355) #24 DPF2 (ENSSMRG00000020354) POLA2 (ENSSMRG00000020352) RBM14 (ENSSMRG00000020351) CCS (ENSSMRG00000020350) ENSSMRG00000020349 ENSSMRG00000020348 SPTBN2 (ENSSMRG00000020347) ENSSMRG00000020346 RCE1 (ENSSMRG00000020343) ACTN3 (ENSSMRG00000020342) ENSSMRG00000020340 SF3B2 (ENSSMRG00000020336) GAL3ST3 (ENSSMRG00000020335) ENSSMRG00000020334 Common wall lizard MODERN SPECIES 7 FOSL1 (ENSPMRG00000015223) CCDC85B (ENSPMRG00000015226) FIBP (ENSPMRG00000015231) EFEMP2 (ENSPMRG00000015236) MUS81 (ENSPMRG00000015240) ENSPMRG00000015247 ENSPMRG00000015252 CFL1 (ENSPMRG00000015255) CD248 (ENSPMRG00000015263) AP5B1 (ENSPMRG00000015266) OVOL1 (ENSPMRG00000015270) ENSPMRG00000015277 ##22 ENSPMRG00000015281 ##22 ENSPMRG00000015284 ##22 ENSPMRG00000015298 ##22 ENSPMRG00000015308 ##22 CHRM1 (ENSPMRG00000015315) #24 DPF2 (ENSPMRG00000015322) CDC42EP2 (ENSPMRG00000015335) POLA2 (ENSPMRG00000015344) ENSPMRG00000015363 CDCA5 (ENSPMRG00000015393) ZFPL1 (ENSPMRG00000015397) VPS51 (ENSPMRG00000015399) ENSPMRG00000015412 TM7SF2 (ENSPMRG00000015418) ZNHIT2 (ENSPMRG00000015430) FAU (ENSPMRG00000015437) ENSPMRG00000015443 ENSPMRG00000015451 MAP4K2 (ENSPMRG00000015521) Toxicofera ANCESTRAL SPECIES 28 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 Elapidae ANCESTRAL SPECIES 27 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 ENSGT00940000161329 Elapidae_a ANCESTRAL SPECIES 43 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT00940000169892 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00940000160034 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.b Eastern brown snake MODERN SPECIES 85 FOSL1 (ENSPTXG00000010973) BBS1 (ENSPTXG00000010881) ENSPTXG00000010872 DPP3 (ENSPTXG00000010869) PELI3 (ENSPTXG00000010866) DRAP1 (ENSPTXG00000010864) C11orf68 (ENSPTXG00000010863) RELA (ENSPTXG00000010343) KAT5 (ENSPTXG00000010339) ENSPTXG00000010338 AP5B1 (ENSPTXG00000010337) ENSPTXG00000010336 ##22 ENSPTXG00000010331 ##22 ENSPTXG00000010225 ##22 ENSPTXG00000010206 ##22 ENSPTXG00000010123 ##22 DPF2 (ENSPTXG00000010121) CDC42EP2 (ENSPTXG00000010120) ENSPTXG00000010119 CAPN1 (ENSPTXG00000010118) SPDYC (ENSPTXG00000010117) SYVN1 (ENSPTXG00000010116) SLAMF8 (ENSPTXG00000010114) CFAP45 (ENSPTXG00000010113) ENSPTXG00000010112 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010091 ENSPTXG00000010089 ENSPTXG00000010088 ENSPTXG00000010087 ENSPTXG00000010086 Mainland tiger snake MODERN SPECIES 708 ENSNSUG00000017271 ##22 ENSNSUG00000017270 ##22 DPF2 (ENSNSUG00000017262) CDC42EP2 (ENSNSUG00000017260) POLA2 (ENSNSUG00000017248) Blue-lipped sea krait MODERN SPECIES 4292 ENSLLTG00000009509 ##22 ENSLLTG00000009064 ##22 ENSLLTG00000008818 ##22 DPF2 (ENSLLTG00000008775) CDC42EP2 (ENSLLTG00000008755) POLA2 (ENSLLTG00000008720) ENSLLTG00000008694 Indian cobra MODERN SPECIES 17 ENSNNAG00000003873 DPP3 (ENSNNAG00000003999) PELI3 (ENSNNAG00000004868) ENSNNAG00000004888 ENSNNAG00000004908 C11orf68 (ENSNNAG00000004981) RELA (ENSNNAG00000004992) ENSNNAG00000005022 ENSNNAG00000005042 AP5B1 (ENSNNAG00000005057) OVOL1 (ENSNNAG00000005073) ENSNNAG00000005118 ##22 ENSNNAG00000005405 ##22 ENSNNAG00000005756 ##22 ENSNNAG00000006165 ##22 ENSNNAG00000006513 ##22 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) ENSNNAG00000007258 ENSNNAG00000007266 ENSNNAG00000007287 ENSNNAG00000007337 Archelosauria ANCESTRAL SPECIES 38 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028 Cryptodira ANCESTRAL SPECIES 17 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028.d Emydidae ANCESTRAL SPECIES 13 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a.i.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.a.a.i.b ##22 ENSGT00940000154901.C.b.f.b.a.a.j ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028.c painted turtle MODERN SPECIES 2386 ENSCPBG00000023531 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 FAU (ENSCPBG00000023637) ZNHIT2 (ENSCPBG00000023638) TM7SF2 (ENSCPBG00000023641) ENSCPBG00000023643 VPS51 (ENSCPBG00000023645) ZFPL1 (ENSCPBG00000023648) CDCA5 (ENSCPBG00000023649) Three-toed box turtle MODERN SPECIES 33 MARK2 (ENSTMTG00000002082) ENSTMTG00000002131 ENSTMTG00000002140 ZFTA (ENSTMTG00000002149) ENSTMTG00000002155 ATL3 (ENSTMTG00000002166) ENSTMTG00000002174 ENSTMTG00000002196 ENSTMTG00000002243 ENSTMTG00000002253 ENSTMTG00000002262 LGALS12 (ENSTMTG00000002278) ENSTMTG00000002287 ##22 ENSTMTG00000002299 ##22 ENSTMTG00000002322 ##22 ENSTMTG00000002391 ##22 CHRM1 (ENSTMTG00000002487) #24 DPF2 (ENSTMTG00000002493) CDC42EP2 (ENSTMTG00000002496) POLA2 (ENSTMTG00000002499) CAPN1 (ENSTMTG00000002515) SPDYC (ENSTMTG00000002540) SYVN1 (ENSTMTG00000002548) ENSTMTG00000002555 MRPL49 (ENSTMTG00000002564) FAU (ENSTMTG00000002567) ZNHIT2 (ENSTMTG00000002573) TM7SF2 (ENSTMTG00000002585) ENSTMTG00000002591 VPS51 (ENSTMTG00000002597) ZFPL1 (ENSTMTG00000002607) Testudinidae ANCESTRAL SPECIES 5 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479.`b ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 ENSGT00390000010028.d Abingdon island giant tortoise MODERN SPECIES 2278 ZFTA (ENSCABG00000000736) ENSCABG00000000737 ATL3 (ENSCABG00000000739) ENSCABG00000000740 ENSCABG00000000743 ENSCABG00000000745 ENSCABG00000000747 ENSCABG00000000756 ENSCABG00000000809 LGALS12 (ENSCABG00000000816) ENSCABG00000000918 ENSCABG00000000934 ##22 ENSCABG00000001060 ##22 ENSCABG00000001301 ##22 ENSCABG00000001338 ##22 ENSCABG00000001482 ##22 CHRM1 (ENSCABG00000001601) #24 DPF2 (ENSCABG00000001614) CDC42EP2 (ENSCABG00000001686) POLA2 (ENSCABG00000001701) CAPN1 (ENSCABG00000001957) SPDYC (ENSCABG00000002961) SYVN1 (ENSCABG00000002965) ENSCABG00000002969 MRPL49 (ENSCABG00000002973) FAU (ENSCABG00000002974) ZNHIT2 (ENSCABG00000002976) TM7SF2 (ENSCABG00000002977) Goode s thornscrub tortoise MODERN SPECIES 21 ENSGEVG00005011921 ENSGEVG00005011885 ZFTA (ENSGEVG00005011808) ENSGEVG00005011707 ATL3 (ENSGEVG00005011679) ENSGEVG00005011654 ENSGEVG00005011526 ENSGEVG00005011491 ENSGEVG00005011390 ENSGEVG00005011291 ENSGEVG00005011225 LGALS12 (ENSGEVG00005011151) ENSGEVG00005010707 ##22 ENSGEVG00005010042 ##22 ENSGEVG00005009473 ##22 ENSGEVG00005008720 ##22 CHRM1 (ENSGEVG00005008602) #24 DPF2 (ENSGEVG00005008558) CDC42EP2 (ENSGEVG00005008521) POLA2 (ENSGEVG00005008496) CAPN1 (ENSGEVG00005008420) SPDYC (ENSGEVG00005008396) SYVN1 (ENSGEVG00005008363) ENSGEVG00005008319 MRPL49 (ENSGEVG00005008293) ENSGEVG00005008268 ZNHIT2 (ENSGEVG00005008244) TM7SF2 (ENSGEVG00005008228) ENSGEVG00005008211 VPS51 (ENSGEVG00005008186) ZFPL1 (ENSGEVG00005008161) Chinese turtle MODERN SPECIES 2112 LGALS12 (ENSPSIG00000012610) ENSPSIG00000012542 ##22 ENSPSIG00000012508 ##22 ENSPSIG00000012485 ##22 ENSPSIG00000011590 ##22 ENSPSIG00000011491 ##22 CHRM1 (ENSPSIG00000000656) #24 DPF2 (ENSPSIG00000010805) CDC42EP2 (ENSPSIG00000000649) POLA2 (ENSPSIG00000010575) CAPN1 (ENSPSIG00000008053) SPDYC (ENSPSIG00000007826) SYVN1 (ENSPSIG00000006560) ENSPSIG00000006533 FAU (ENSPSIG00000006273) ZNHIT2 (ENSPSIG00000006244) TM7SF2 (ENSPSIG00000006053) VPS51 (ENSPSIG00000005609) ZFPL1 (ENSPSIG00000005590) CDCA5 (ENSPSIG00000005587) NAALADL1 (ENSPSIG00000015629) Mammalia ANCESTRAL SPECIES 9 ENSGT00390000006979.a ENSGT00390000006255.b ENSGT00940000156048.a.a ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000166766 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853 ENSGT00940000162660.b.e.b ENSGT00940000161499 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539 #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00950000183059.a ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 ENSGT00390000011639 Theria ANCESTRAL SPECIES 8 ENSGT00390000006979.a ENSGT00390000006255.b.b ENSGT00940000156048.a.a ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162660.b.e.b ENSGT00940000161499 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539 #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00950000183059.a ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 ENSGT00390000011639 Marsupialia ANCESTRAL SPECIES 12 ENSGT00390000006255.b.b ENSGT00940000168159 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162660.b.e.b.g.a ENSGT00940000161499 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.g #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00950000183059.a ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 Marsupialia_b ANCESTRAL SPECIES 15 ENSGT00390000006255.b.b ENSGT00940000168159 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162660.b.e.b.g.a ENSGT00940000161499 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.g #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00950000183059.a ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 Diprotodontia ANCESTRAL SPECIES 26 ENSGT00390000006255.b.b ENSGT00940000156048.a.a ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162660.b.e.b.g.a ENSGT00940000161499 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.g #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 ENSGT00390000011639 Diprotodontia_a ANCESTRAL SPECIES 15 ENSGT00940000156048.a.a ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00410000025985 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.d ENSGT00940000162660.b.e.b.g.a ENSGT00940000162660.b.e.a ENSGT00940000161499 ENSGT00940000157004.a.a.e.b ##23 ENSGT00940000154901.C.b.e #22 ENSGT00940000157004.a.b #23 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00970000198388 ENSGT00940000162301 #24 ENSGT00940000156646 #25 ENSGT00390000015119 #26 ENSGT01000000214440.C #28 ENSGT00390000007539.g #29 ENSGT00390000012589 #30 ENSGT00510000048151 #31 ENSGT00640000091486.a #32 ENSGT00390000008975 #33 ENSGT00940000161486 #34 ENSGT00940000161805 #35 ENSGT00940000160376 #36 ENSGT01100000263497.B #37 ENSGT00390000011639 Common wonbat MODERN SPECIES 901 SLC22A8 (ENSVURG00010000539) #22 SLC22A6 (ENSVURG00010000773) #23 ENSVURG00010000838 ##22 ENSVURG00010001279 CHRM1 (ENSVURG00010001286) #24 SLC3A2 (ENSVURG00010001296) #25 WDR74 (ENSVURG00010001367) #26 STX5 (ENSVURG00010001407) #28 ENSVURG00010001446 #29 TMEM223 (ENSVURG00010001486) #30 TMEM179B (ENSVURG00010001496) #31 TAF6L (ENSVURG00010001513) #32 POLR2G (ENSVURG00010001531) #33 TTC9C (ENSVURG00010001583) #35 ENSVURG00010001618 GNG3 (ENSVURG00010001979) #37 ENSVURG00010001984 ENSVURG00010001988 koala MODERN SPECIES 179 ENSPCIG00000030061 NAA40 (ENSPCIG00000035706) RCOR2 (ENSPCIG00000015584) MARK2 (ENSPCIG00000015578) SPINDOC (ENSPCIG00000015574) ZFTA (ENSPCIG00000015569) ENSPCIG00000015561 ATL3 (ENSPCIG00000015551) PLAAT3 (ENSPCIG00000031587) ENSPCIG00000015546 ENSPCIG00000015542 LGALS12 (ENSPCIG00000015539) ENSPCIG00000015537 ##23 SLC22A8 (ENSPCIG00000015222) #22 SLC22A6 (ENSPCIG00000015223) #23 ENSPCIG00000017646 ##22 ENSPCIG00000017645 CHRM1 (ENSPCIG00000017643) #24 SLC3A2 (ENSPCIG00000018245) #25 WDR74 (ENSPCIG00000018719) #26 STX5 (ENSPCIG00000018721) #28 ENSPCIG00000015226 #29 TMEM223 (ENSPCIG00000015231) #30 TMEM179B (ENSPCIG00000015233) #31 TAF6L (ENSPCIG00000015237) #32 ENSPCIG00000036190 POLR2G (ENSPCIG00000015245) #33 ZBTB3 (ENSPCIG00000015249) #34 TTC9C (ENSPCIG00000015251) #35 HNRNPUL2 (ENSPCIG00000015254) #36 GNG3 (ENSPCIG00000015258) #37 Tasmanian devil MODERN SPECIES 5 NAA40 (ENSSHAG00000005153) ENSSHAG00000004812 MARK2 (ENSSHAG00000005716) RCOR2 (ENSSHAG00000020586) SPINDOC (ENSSHAG00000006662) ZFTA (ENSSHAG00000022871) ENSSHAG00000021781 ATL3 (ENSSHAG00000002162) ENSSHAG00000020987 ENSSHAG00000022686 LGALS12 (ENSSHAG00000004703) ENSSHAG00000005173 ##23 ENSSHAG00000032003 SLC22A8 (ENSSHAG00000006603) #22 SLC22A6 (ENSSHAG00000007804) #23 ENSSHAG00000022689 ##22 CHRM1 (ENSSHAG00000021922) #24 ENSSHAG00000022006 SLC3A2 (ENSSHAG00000007209) #25 STX5 (ENSSHAG00000024697) #28 WDR74 (ENSSHAG00000026668) #26 ENSSHAG00000006407 #29 TMEM223 (ENSSHAG00000025382) #30 TMEM179B (ENSSHAG00000006311) #31 TAF6L (ENSSHAG00000031966) #32 POLR2G (ENSSHAG00000006006) #33 ENSSHAG00000005891 ZBTB3 (ENSSHAG00000029780) #34 HNRNPUL2 (ENSSHAG00000005445) #36 GNG3 (ENSSHAG00000031455) #37 UBXN1 (ENSSHAG00000029413) Opossum MODERN SPECIES 4 NAP1L4 (ENSMODG00000007012) ENSMODG00000029435 ENSMODG00000043944 ENSMODG00000041851 ENSMODG00000008826 ENSMODG00000008821 MARK2 (ENSMODG00000008796) SPINDOC (ENSMODG00000025552) ENSMODG00000008519 ENSMODG00000008485 ENSMODG00000037909 ENSMODG00000028381 ENSMODG00000008374 ##23 ENSMODG00000038980 ##23 SLC22A6 (ENSMODG00000008309) #23 SLC22A8 (ENSMODG00000036916) ##22 ENSMODG00000049907 CHRM1 (ENSMODG00000008164) #24 SLC3A2 (ENSMODG00000008156) #25 WDR74 (ENSMODG00000008120) #26 ENSMODG00000008085 #29 TMEM223 (ENSMODG00000008008) #30 TMEM179B (ENSMODG00000008003) #31 TAF6L (ENSMODG00000007998) #32 POLR2G (ENSMODG00000007984) #33 ENSMODG00000045532 ENSMODG00000040142 ENSMODG00000005789 ZBTB3 (ENSMODG00000007952) #34 TTC9C (ENSMODG00000007947) #35 GNG3 (ENSMODG00000007929) #37 Platypus MODERN SPECIES 14 RCOR2 (ENSOANG00000040560) ENSOANG00000046888 OTUB1 (ENSOANG00000013465) ENSOANG00000002564 NAA40 (ENSOANG00000012758) MARK2 (ENSOANG00000036135) ENSOANG00000014021 ENSOANG00000051102 ZFTA (ENSOANG00000002940) ENSOANG00000050498 ATL3 (ENSOANG00000037533) ENSOANG00000042590 ENSOANG00000040471 LGALS12 (ENSOANG00000004064) SLC22A6 (ENSOANG00000008288) #23 ENSOANG00000031587 ##22 SLC3A2 (ENSOANG00000010311) #25 WDR74 (ENSOANG00000037883) #26 STX5 (ENSOANG00000039351) #28 ENSOANG00000040729 #29 TMEM223 (ENSOANG00000043257) #30 TMEM179B (ENSOANG00000006059) #31 TAF6L (ENSOANG00000043190) #32 POLR2G (ENSOANG00000005808) #33 ZBTB3 (ENSOANG00000049050) #34 TTC9C (ENSOANG00000042865) #35 ENSOANG00000040832 GNG3 (ENSOANG00000039522) #37 LRRN4CL (ENSOANG00000001564) UBXN1 (ENSOANG00000001565) ENSOANG00000047873 Amniota ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.b.b ##22 Sauria DUPLICATION Sauria DUPLICATION Sauria ANCESTRAL SPECIES 40 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b Archelosauria ANCESTRAL SPECIES 38 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 Cryptodira ANCESTRAL SPECIES 17 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 Emydidae ANCESTRAL SPECIES 13 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a.i.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.a.a.i.b ##22 ENSGT00940000154901.C.b.f.b.a.a.j ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 painted turtle DUPLICATION painted turtle DUPLICATION painted turtle DUPLICATION painted turtle DUPLICATION painted turtle MODERN SPECIES 1123 ENSCPBG00000018749 ##22 ENSCPBG00000018748 ##22 ENSCPBG00000018746 ##22 ENSCPBG00000018744 ##22 ENSCPBG00000018740 ##22 ENSCPBG00000018738 ##22 painted turtle MODERN SPECIES 2061 ENSCPBG00000004941 ##22 painted turtle MODERN SPECIES 1815 ENSCPBG00000007748 ##22 painted turtle DUPLICATION painted turtle DUPLICATION painted turtle MODERN SPECIES 2386 NAA40 (ENSCPBG00000023507) RCOR2 (ENSCPBG00000023509) MARK2 (ENSCPBG00000023513) ENSCPBG00000023518 ENSCPBG00000023519 ZFTA (ENSCPBG00000023522) ENSCPBG00000023525 ATL3 (ENSCPBG00000023529) ENSCPBG00000023531 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 painted turtle MODERN SPECIES 1828 ENSCPBG00000009374 ##22 painted turtle MODERN SPECIES 1123 ENSCPBG00000018749 ##22 ENSCPBG00000018748 ##22 ENSCPBG00000018746 ##22 ENSCPBG00000018744 ##22 ENSCPBG00000018740 ##22 ENSCPBG00000018738 ##22 painted turtle DUPLICATION painted turtle DUPLICATION painted turtle DUPLICATION painted turtle DUPLICATION painted turtle DUPLICATION painted turtle DUPLICATION painted turtle MODERN SPECIES 1123 ENSCPBG00000018749 ##22 ENSCPBG00000018748 ##22 ENSCPBG00000018746 ##22 ENSCPBG00000018744 ##22 ENSCPBG00000018740 ##22 ENSCPBG00000018738 ##22 painted turtle MODERN SPECIES 2386 ENSCPBG00000023518 ENSCPBG00000023519 ZFTA (ENSCPBG00000023522) ENSCPBG00000023525 ATL3 (ENSCPBG00000023529) ENSCPBG00000023531 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 FAU (ENSCPBG00000023637) ZNHIT2 (ENSCPBG00000023638) painted turtle MODERN SPECIES 1123 ENSCPBG00000018749 ##22 ENSCPBG00000018748 ##22 ENSCPBG00000018746 ##22 ENSCPBG00000018744 ##22 ENSCPBG00000018740 ##22 ENSCPBG00000018738 ##22 painted turtle MODERN SPECIES 2120 ENSCPBG00000005346 ##22 painted turtle MODERN SPECIES 2386 ZFTA (ENSCPBG00000023522) ENSCPBG00000023525 ATL3 (ENSCPBG00000023529) ENSCPBG00000023531 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 FAU (ENSCPBG00000023637) ZNHIT2 (ENSCPBG00000023638) TM7SF2 (ENSCPBG00000023641) ENSCPBG00000023643 painted turtle MODERN SPECIES 1320 ENSCPBG00000000765 ##22 ENSCPBG00000000637 ##22 painted turtle DUPLICATION painted turtle DUPLICATION painted turtle MODERN SPECIES 1834 ENSCPBG00000009469 ##22 painted turtle MODERN SPECIES 2386 MARK2 (ENSCPBG00000023513) ENSCPBG00000023518 ENSCPBG00000023519 ZFTA (ENSCPBG00000023522) ENSCPBG00000023525 ATL3 (ENSCPBG00000023529) ENSCPBG00000023531 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 FAU (ENSCPBG00000023637) painted turtle DUPLICATION painted turtle MODERN SPECIES 2023 ENSCPBG00000003175 ##22 painted turtle MODERN SPECIES 2386 RCOR2 (ENSCPBG00000023509) MARK2 (ENSCPBG00000023513) ENSCPBG00000023518 ENSCPBG00000023519 ZFTA (ENSCPBG00000023522) ENSCPBG00000023525 ATL3 (ENSCPBG00000023529) ENSCPBG00000023531 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 Testudinidae ANCESTRAL SPECIES 5 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479.`b ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 Abingdon island giant tortoise MODERN SPECIES 2278 MARK2 (ENSCABG00000000715) ENSCABG00000000726 ENSCABG00000000734 ZFTA (ENSCABG00000000736) ENSCABG00000000737 ATL3 (ENSCABG00000000739) ENSCABG00000000740 ENSCABG00000000743 ENSCABG00000000745 ENSCABG00000000747 ENSCABG00000000756 ENSCABG00000000809 LGALS12 (ENSCABG00000000816) ENSCABG00000000918 ENSCABG00000000934 ##22 ENSCABG00000001060 ##22 ENSCABG00000001301 ##22 ENSCABG00000001338 ##22 ENSCABG00000001482 ##22 CHRM1 (ENSCABG00000001601) #24 DPF2 (ENSCABG00000001614) CDC42EP2 (ENSCABG00000001686) POLA2 (ENSCABG00000001701) CAPN1 (ENSCABG00000001957) SPDYC (ENSCABG00000002961) SYVN1 (ENSCABG00000002965) ENSCABG00000002969 MRPL49 (ENSCABG00000002973) FAU (ENSCABG00000002974) ZNHIT2 (ENSCABG00000002976) TM7SF2 (ENSCABG00000002977) Goode s thornscrub tortoise MODERN SPECIES 21 RCOR2 (ENSGEVG00005012299) MARK2 (ENSGEVG00005012049) ENSGEVG00005011921 ENSGEVG00005011885 ZFTA (ENSGEVG00005011808) ENSGEVG00005011707 ATL3 (ENSGEVG00005011679) ENSGEVG00005011654 ENSGEVG00005011526 ENSGEVG00005011491 ENSGEVG00005011390 ENSGEVG00005011291 ENSGEVG00005011225 LGALS12 (ENSGEVG00005011151) ENSGEVG00005010707 ##22 ENSGEVG00005010042 ##22 ENSGEVG00005009473 ##22 ENSGEVG00005008720 ##22 CHRM1 (ENSGEVG00005008602) #24 DPF2 (ENSGEVG00005008558) CDC42EP2 (ENSGEVG00005008521) POLA2 (ENSGEVG00005008496) CAPN1 (ENSGEVG00005008420) SPDYC (ENSGEVG00005008396) SYVN1 (ENSGEVG00005008363) ENSGEVG00005008319 MRPL49 (ENSGEVG00005008293) ENSGEVG00005008268 ZNHIT2 (ENSGEVG00005008244) TM7SF2 (ENSGEVG00005008228) ENSGEVG00005008211 Chinese turtle MODERN SPECIES 2112 LGALS12 (ENSPSIG00000012610) ENSPSIG00000012542 ##22 ENSPSIG00000012508 ##22 ENSPSIG00000012485 ##22 ENSPSIG00000011590 ##22 ENSPSIG00000011491 ##22 CHRM1 (ENSPSIG00000000656) #24 DPF2 (ENSPSIG00000010805) CDC42EP2 (ENSPSIG00000000649) POLA2 (ENSPSIG00000010575) CAPN1 (ENSPSIG00000008053) SPDYC (ENSPSIG00000007826) SYVN1 (ENSPSIG00000006560) ENSPSIG00000006533 FAU (ENSPSIG00000006273) ZNHIT2 (ENSPSIG00000006244) TM7SF2 (ENSPSIG00000006053) VPS51 (ENSPSIG00000005609) ZFPL1 (ENSPSIG00000005590) Archosauria ANCESTRAL SPECIES 76 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000008975 #33 ENSGT00390000007552 ENSGT00940000154902 Aves ANCESTRAL SPECIES 70 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000008975 #33 ENSGT00390000007552 ENSGT00940000154902 Neognathae ANCESTRAL SPECIES 46 ENSGT00940000159375 ENSGT00390000006979.a ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00980000200147 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000162343 ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 Galloanserae ANCESTRAL SPECIES 61 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 Anatidae ANCESTRAL SPECIES 122 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000161776 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 Duck MODERN SPECIES 3232 ENSAPLG00000013761 ##22 Pink-footed goose MODERN SPECIES 506 ENSABRG00000011027 ##22 ENSABRG00000011145 ##22 ENSABRG00000011151 ##22 CDC42EP2 (ENSABRG00000000210) CAPN1 (ENSABRG00000000253) SPDYC (ENSABRG00000000377) SYVN1 (ENSABRG00000000386) Neognathae_b ANCESTRAL SPECIES 39 ENSGT00390000012589 #30 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00980000200147 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000006979.a ENSGT00940000159375 ENSGT00940000154911 ENSGT00390000013444.a.b.b ENSGT00390000002731 ENSGT00930000151054 ENSGT00530000063721.B Neognathae_c ANCESTRAL SPECIES 47 ENSGT00960000192922 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479.cb ENSGT00390000015119 #26 Golden eagle MODERN SPECIES 63 ENSACCG00020016957 DRAP1 (ENSACCG00020012253) ENSACCG00020012269 ##22 ENSACCG00020012301 ##22 ENSACCG00020012339 ##22 DPF2 (ENSACCG00020012404) CDC42EP2 (ENSACCG00020012469) POLA2 (ENSACCG00020012493) CAPN1 (ENSACCG00020012546) SPDYC (ENSACCG00020012590) SYVN1 (ENSACCG00020012628) ENSACCG00020012688 Passeriformes ANCESTRAL SPECIES 43 ENSGT00940000160376 #36 ENSGT00390000012589 #30 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #32 ENSGT00390000006979.a ENSGT00940000159375 ENSGT00940000154911 Great tit MODERN SPECIES 424 ENSPMJG00000003271 ##22 ENSPMJG00000003274 ##22 Passeriformes_d ANCESTRAL SPECIES 38 ENSGT00940000160376 #36 ENSGT00390000012589 #30 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #32 ENSGT00390000006979.a ENSGT00940000159375 ENSGT00940000154911 Passeriformes_g ANCESTRAL SPECIES 44 ENSGT00940000160376 #36 ENSGT00390000012589 #30 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #32 ENSGT00390000006979.a ENSGT00940000159375 ENSGT00940000154911 Passeroidea ANCESTRAL SPECIES 54 ENSGT00940000160376 #36 ENSGT00390000012589 #30 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070.c Zebra finch MODERN SPECIES 38 ENSTGUG00000027721 #29 ENSTGUG00000025536 ENSTGUG00000024672 ENSTGUG00000025402 ENSTGUG00000019144 ENSTGUG00000023367 ENSTGUG00000018975 ENSTGUG00000026804 ENSTGUG00000021779 ENSTGUG00000028550 ENSTGUG00000024470 ENSTGUG00000029491 ENSTGUG00000023063 ENSTGUG00000028070 ENSTGUG00000026404 ##22 ENSTGUG00000020056 ##22 ENSTGUG00000022802 ##22 ENSTGUG00000025700 ENSTGUG00000028595 ENSTGUG00000024413 ENSTGUG00000028151 MRPL49 (ENSTGUG00000021342) ENSTGUG00000016038 ENSTGUG00000027373 ENSTGUG00000026586 ENSTGUG00000019970 ENSTGUG00000021341 ENSTGUG00000020752 ENSTGUG00000016898 OTUB1 (ENSTGUG00000025728) ENSTGUG00000019325 Medium ground finch MODERN SPECIES 435 ENSGFOG00000013454 ##22 ENSGFOG00000013435 ##22 DPF2 (ENSGFOG00000013426) CDC42EP2 (ENSGFOG00000013422) POLA2 (ENSGFOG00000013415) CAPN1 (ENSGFOG00000013412) SYVN1 (ENSGFOG00000013408) African ostrich MODERN SPECIES 508 ENSSCUG00000006058 ##22 SLC22A8 (ENSSCUG00000006061) ##22 ENSSCUG00000006066 ENSSCUG00000006068 POLA2 (ENSSCUG00000006069) ENSSCUG00000006073 SPDYC (ENSSCUG00000006075) SYVN1 (ENSSCUG00000006078) Lepidosauria ANCESTRAL SPECIES 87 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00940000163054.b ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 Episquamata ANCESTRAL SPECIES 19 ENSGT00390000015815 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01100000263573.b.b ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b Toxicofera ANCESTRAL SPECIES 28 ENSGT00390000015815 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 Elapidae ANCESTRAL SPECIES 27 ENSGT00390000015815 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Elapidae_a ANCESTRAL SPECIES 43 ENSGT00390000015815 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00940000159437 ENSGT00390000015815 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 Mainland tiger snake MODERN SPECIES 1014 ENSNSUG00000002171 ##22 ENSNSUG00000002165 ##22 Eastern brown snake MODERN SPECIES 85 EFEMP2 (ENSPTXG00000010977) FIBP (ENSPTXG00000010975) ENSPTXG00000010974 FOSL1 (ENSPTXG00000010973) BBS1 (ENSPTXG00000010881) ENSPTXG00000010872 DPP3 (ENSPTXG00000010869) PELI3 (ENSPTXG00000010866) DRAP1 (ENSPTXG00000010864) C11orf68 (ENSPTXG00000010863) RELA (ENSPTXG00000010343) KAT5 (ENSPTXG00000010339) ENSPTXG00000010338 AP5B1 (ENSPTXG00000010337) ENSPTXG00000010336 ##22 ENSPTXG00000010331 ##22 ENSPTXG00000010225 ##22 ENSPTXG00000010206 ##22 ENSPTXG00000010123 ##22 DPF2 (ENSPTXG00000010121) CDC42EP2 (ENSPTXG00000010120) ENSPTXG00000010119 CAPN1 (ENSPTXG00000010118) SPDYC (ENSPTXG00000010117) SYVN1 (ENSPTXG00000010116) SLAMF8 (ENSPTXG00000010114) CFAP45 (ENSPTXG00000010113) ENSPTXG00000010112 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010091 ENSPTXG00000010089 Blue-lipped sea krait MODERN SPECIES 5737 OVOL1 (ENSLLTG00000015715) ENSLLTG00000015730 ##22 ENSLLTG00000015771 ##22 ENSLLTG00000003127 ##22 TAGLN2 (ENSLLTG00000003142) CFAP45 (ENSLLTG00000003162) ENSLLTG00000003175 ENSLLTG00000003185 SLAMF8 (ENSLLTG00000003209) SYVN1 (ENSLLTG00000003234) SPDYC (ENSLLTG00000003290) CAPN1 (ENSLLTG00000003332) ENSLLTG00000003375 Indian cobra MODERN SPECIES 17 CTSW (ENSNNAG00000016157) ENSNNAG00000016168 ENSNNAG00000016176 ENSNNAG00000003873 DPP3 (ENSNNAG00000003999) PELI3 (ENSNNAG00000004868) ENSNNAG00000004888 ENSNNAG00000004908 C11orf68 (ENSNNAG00000004981) RELA (ENSNNAG00000004992) ENSNNAG00000005022 ENSNNAG00000005042 AP5B1 (ENSNNAG00000005057) OVOL1 (ENSNNAG00000005073) ENSNNAG00000005118 ##22 ENSNNAG00000005405 ##22 ENSNNAG00000005756 ##22 ENSNNAG00000006165 ##22 ENSNNAG00000006513 ##22 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) ENSNNAG00000007258 Lizard MODERN SPECIES 1861 ENSACAG00000006309 ENSACAG00000026822 ##22 ENSACAG00000031439 ##22 Laterata ANCESTRAL SPECIES 62 ENSGT00940000160034 ENSGT00550000074954 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00940000154556 ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000163054.b ENSGT00960000189006 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 Common wall lizard MODERN SPECIES 7 BBS1 (ENSPMRG00000015200) ENSPMRG00000015208 ENSPMRG00000015216 FOSL1 (ENSPMRG00000015223) CCDC85B (ENSPMRG00000015226) FIBP (ENSPMRG00000015231) EFEMP2 (ENSPMRG00000015236) MUS81 (ENSPMRG00000015240) ENSPMRG00000015247 ENSPMRG00000015252 CFL1 (ENSPMRG00000015255) CD248 (ENSPMRG00000015263) AP5B1 (ENSPMRG00000015266) OVOL1 (ENSPMRG00000015270) ENSPMRG00000015277 ##22 ENSPMRG00000015281 ##22 ENSPMRG00000015284 ##22 ENSPMRG00000015298 ##22 ENSPMRG00000015308 ##22 CHRM1 (ENSPMRG00000015315) #24 DPF2 (ENSPMRG00000015322) CDC42EP2 (ENSPMRG00000015335) POLA2 (ENSPMRG00000015344) ENSPMRG00000015363 CDCA5 (ENSPMRG00000015393) ZFPL1 (ENSPMRG00000015397) VPS51 (ENSPMRG00000015399) ENSPMRG00000015412 TM7SF2 (ENSPMRG00000015418) ZNHIT2 (ENSPMRG00000015430) FAU (ENSPMRG00000015437) tuatara MODERN SPECIES 1099 ENSSPUG00000000492 ENSSPUG00000000496 ENSSPUG00000000512 ENSSPUG00000000523 ENSSPUG00000000529 ENSSPUG00000000539 ENSSPUG00000000549 ENSSPUG00000000562 SYVN1 (ENSSPUG00000000566) CAPN1 (ENSSPUG00000000579) ENSSPUG00000000587 ENSSPUG00000000600 ENSSPUG00000000606 AP5B1 (ENSSPUG00000000608) ENSSPUG00000000637 ##22 ENSSPUG00000000660 ##22 ENSSPUG00000000702 ##22 ENSSPUG00000000706 ##22 ENSSPUG00000000714 ##22 DPF2 (ENSSPUG00000000759) POLA2 (ENSSPUG00000000790) ENSSPUG00000000842 KAT5 (ENSSPUG00000000847) ENSSPUG00000000958 ENSSPUG00000000963 CRABP2 (ENSSPUG00000000974) ISG20L2 (ENSSPUG00000000985) MRPL24 (ENSSPUG00000001037) HDGF (ENSSPUG00000001042) PRCC (ENSSPUG00000001049) SH2D2A (ENSSPUG00000001057) Sauria ANCESTRAL SPECIES 40 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 Archelosauria ANCESTRAL SPECIES 38 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 Cryptodira ANCESTRAL SPECIES 17 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00940000155031 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 Emydidae ANCESTRAL SPECIES 13 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a.i.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.a.a.i.b ##22 ENSGT00940000154901.C.b.f.b.a.a.j ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 painted turtle MODERN SPECIES 2386 ENSCPBG00000023525 ATL3 (ENSCPBG00000023529) ENSCPBG00000023531 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 FAU (ENSCPBG00000023637) ZNHIT2 (ENSCPBG00000023638) TM7SF2 (ENSCPBG00000023641) ENSCPBG00000023643 VPS51 (ENSCPBG00000023645) Three-toed box turtle MODERN SPECIES 33 NAA40 (ENSTMTG00000002041) RCOR2 (ENSTMTG00000002058) MARK2 (ENSTMTG00000002082) ENSTMTG00000002131 ENSTMTG00000002140 ZFTA (ENSTMTG00000002149) ENSTMTG00000002155 ATL3 (ENSTMTG00000002166) ENSTMTG00000002174 ENSTMTG00000002196 ENSTMTG00000002243 ENSTMTG00000002253 ENSTMTG00000002262 LGALS12 (ENSTMTG00000002278) ENSTMTG00000002287 ##22 ENSTMTG00000002299 ##22 ENSTMTG00000002322 ##22 ENSTMTG00000002391 ##22 CHRM1 (ENSTMTG00000002487) #24 DPF2 (ENSTMTG00000002493) CDC42EP2 (ENSTMTG00000002496) POLA2 (ENSTMTG00000002499) CAPN1 (ENSTMTG00000002515) SPDYC (ENSTMTG00000002540) SYVN1 (ENSTMTG00000002548) ENSTMTG00000002555 MRPL49 (ENSTMTG00000002564) FAU (ENSTMTG00000002567) ZNHIT2 (ENSTMTG00000002573) TM7SF2 (ENSTMTG00000002585) ENSTMTG00000002591 Testudinidae ANCESTRAL SPECIES 5 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479.`b ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 Abingdon island giant tortoise MODERN SPECIES 2278 ENSCABG00000000726 ENSCABG00000000734 ZFTA (ENSCABG00000000736) ENSCABG00000000737 ATL3 (ENSCABG00000000739) ENSCABG00000000740 ENSCABG00000000743 ENSCABG00000000745 ENSCABG00000000747 ENSCABG00000000756 ENSCABG00000000809 LGALS12 (ENSCABG00000000816) ENSCABG00000000918 ENSCABG00000000934 ##22 ENSCABG00000001060 ##22 ENSCABG00000001301 ##22 ENSCABG00000001338 ##22 ENSCABG00000001482 ##22 CHRM1 (ENSCABG00000001601) #24 DPF2 (ENSCABG00000001614) CDC42EP2 (ENSCABG00000001686) POLA2 (ENSCABG00000001701) CAPN1 (ENSCABG00000001957) SPDYC (ENSCABG00000002961) SYVN1 (ENSCABG00000002965) ENSCABG00000002969 MRPL49 (ENSCABG00000002973) FAU (ENSCABG00000002974) ZNHIT2 (ENSCABG00000002976) TM7SF2 (ENSCABG00000002977) Archosauria ANCESTRAL SPECIES 76 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000008975 #33 ENSGT00390000007552 ENSGT00940000154902 Aves ANCESTRAL SPECIES 70 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000008975 #33 ENSGT00390000007552 ENSGT00940000154902 Neognathae ANCESTRAL SPECIES 46 ENSGT00390000006979.a ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00980000200147 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000162343 ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 Galloanserae ANCESTRAL SPECIES 61 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 Phasianidae ANCESTRAL SPECIES 74 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 Phasianidae_b ANCESTRAL SPECIES 80 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 Chicken MODERN SPECIES 63 ENSGALG00010000144 ENSGALG00010000142 ##22 ENSGALG00010000178 ENSGALG00010000175 ##22 DPF2 (ENSGALG00010000171) CDC42EP2 (ENSGALG00010000161) B3GAT3 (ENSGALG00010000150) ENSGALG00010000149 Anatidae ANCESTRAL SPECIES 122 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000161776 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 Pink-footed goose MODERN SPECIES 506 ENSABRG00000011027 ##22 ENSABRG00000011145 ##22 ENSABRG00000011151 ##22 CDC42EP2 (ENSABRG00000000210) CAPN1 (ENSABRG00000000253) SPDYC (ENSABRG00000000377) SYVN1 (ENSABRG00000000386) Duck MODERN SPECIES 725 ENSAPLG00000020768 ##22 Neognathae_b ANCESTRAL SPECIES 39 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00980000200147 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000006979.a ENSGT00940000159375 ENSGT00940000154911 ENSGT00390000013444.a.b.b ENSGT00390000002731 ENSGT00930000151054 ENSGT00530000063721.B Passeriformes ANCESTRAL SPECIES 43 ENSGT00390000012589 #30 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #32 ENSGT00390000006979.a ENSGT00940000159375 ENSGT00940000154911 Passeriformes_d ANCESTRAL SPECIES 38 ENSGT00390000012589 #30 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #32 ENSGT00390000006979.a ENSGT00940000159375 ENSGT00940000154911 Passeriformes_g ANCESTRAL SPECIES 44 ENSGT00390000012589 #30 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000170110 ENSGT00390000007479.cb ENSGT00390000015119 #26 ENSGT00640000091486.a #32 ENSGT00390000006979.a ENSGT00940000159375 ENSGT00940000154911 Passeroidea ANCESTRAL SPECIES 54 ENSGT00390000012589 #30 ENSGT00390000007539 #29 ENSGT01000000214440.C #28 ENSGT00960000189643 ENSGT00390000014903 ENSGT00940000154196.a ENSGT00940000155031 ENSGT00940000157482 ENSGT00900000141164 ENSGT00940000161363 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070.c Zebra finch MODERN SPECIES 38 ENSTGUG00000025536 ENSTGUG00000024672 ENSTGUG00000025402 ENSTGUG00000019144 ENSTGUG00000023367 ENSTGUG00000018975 ENSTGUG00000026804 ENSTGUG00000021779 ENSTGUG00000028550 ENSTGUG00000024470 ENSTGUG00000029491 ENSTGUG00000023063 ENSTGUG00000028070 ENSTGUG00000026404 ##22 ENSTGUG00000020056 ##22 ENSTGUG00000022802 ##22 ENSTGUG00000025700 ENSTGUG00000028595 ENSTGUG00000024413 ENSTGUG00000028151 MRPL49 (ENSTGUG00000021342) ENSTGUG00000016038 ENSTGUG00000027373 ENSTGUG00000026586 ENSTGUG00000019970 ENSTGUG00000021341 ENSTGUG00000020752 ENSTGUG00000016898 OTUB1 (ENSTGUG00000025728) ENSTGUG00000019325 STIP1 (ENSTGUG00000027054) Great tit MODERN SPECIES 424 ENSPMJG00000003271 ##22 ENSPMJG00000003274 ##22 Neognathae_c ANCESTRAL SPECIES 47 ENSGT00960000192922 ENSGT00940000163054.b ENSGT00940000159867 ENSGT00390000012424.a ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479.cb ENSGT00390000015119 #26 Golden eagle MODERN SPECIES 63 ENSACCG00020016957 DRAP1 (ENSACCG00020012253) ENSACCG00020012269 ##22 ENSACCG00020012301 ##22 ENSACCG00020012339 ##22 DPF2 (ENSACCG00020012404) CDC42EP2 (ENSACCG00020012469) POLA2 (ENSACCG00020012493) CAPN1 (ENSACCG00020012546) SPDYC (ENSACCG00020012590) SYVN1 (ENSACCG00020012628) ENSACCG00020012688 Kakapo MODERN SPECIES 75 PFKFB1 (ENSSHBG00005008286) ENSSHBG00005008296 GNL3L (ENSSHBG00005008311) HUWE1 (ENSSHBG00005009089) NDUFB11 (ENSSHBG00005019046) RBM10 (ENSSHBG00005019052) ENSSHBG00005019288 ENSSHBG00005019289 ENSSHBG00005019291 CDK16 (ENSSHBG00005019294) ENSSHBG00005019295 ENSSHBG00005019297 RELA (ENSSHBG00005019302) DRAP1 (ENSSHBG00005019305) ENSSHBG00005019307 ##22 ENSSHBG00005019310 ##22 ENSSHBG00005019314 DPF2 (ENSSHBG00005019320) CDC42EP2 (ENSSHBG00005019329) POLA2 (ENSSHBG00005019332) CAPN1 (ENSSHBG00005019338) SYVN1 (ENSSHBG00005019344) ENSSHBG00005019348 MRPL49 (ENSSHBG00005019350) FAU (ENSSHBG00005019353) WDR74 (ENSSHBG00005019356) #26 INTS5 (ENSSHBG00005019375) POLR2G (ENSSHBG00005019378) #33 EEF1G (ENSSHBG00005019380) AHNAK (ENSSHBG00005019382) B4GAT1 (ENSSHBG00005019385) Lepidosauria ANCESTRAL SPECIES 87 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00940000163054.b ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 Episquamata ANCESTRAL SPECIES 19 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01100000263573.b.b ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 Laterata ANCESTRAL SPECIES 62 ENSGT00550000074954 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00940000154556 ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000163054.b ENSGT00960000189006 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 Common wall lizard MODERN SPECIES 7 ENSPMRG00000015208 ENSPMRG00000015216 FOSL1 (ENSPMRG00000015223) CCDC85B (ENSPMRG00000015226) FIBP (ENSPMRG00000015231) EFEMP2 (ENSPMRG00000015236) MUS81 (ENSPMRG00000015240) ENSPMRG00000015247 ENSPMRG00000015252 CFL1 (ENSPMRG00000015255) CD248 (ENSPMRG00000015263) AP5B1 (ENSPMRG00000015266) OVOL1 (ENSPMRG00000015270) ENSPMRG00000015277 ##22 ENSPMRG00000015281 ##22 ENSPMRG00000015284 ##22 ENSPMRG00000015298 ##22 ENSPMRG00000015308 ##22 CHRM1 (ENSPMRG00000015315) #24 DPF2 (ENSPMRG00000015322) CDC42EP2 (ENSPMRG00000015335) POLA2 (ENSPMRG00000015344) ENSPMRG00000015363 CDCA5 (ENSPMRG00000015393) ZFPL1 (ENSPMRG00000015397) VPS51 (ENSPMRG00000015399) ENSPMRG00000015412 TM7SF2 (ENSPMRG00000015418) ZNHIT2 (ENSPMRG00000015430) FAU (ENSPMRG00000015437) ENSPMRG00000015443 Argentine black and white tegu MODERN SPECIES 80 FOSL1 (ENSSMRG00000020375) ENSSMRG00000020374 ENSSMRG00000020372 BBS1 (ENSSMRG00000020371) DPP3 (ENSSMRG00000020370) PELI3 (ENSSMRG00000020369) ENSSMRG00000020368 DRAP1 (ENSSMRG00000020367) C11orf68 (ENSSMRG00000020366) ENSSMRG00000020365 RELA (ENSSMRG00000020364) ENSSMRG00000020363 AP5B1 (ENSSMRG00000020362) OVOL1 (ENSSMRG00000020361) ENSSMRG00000020360 ##22 ENSSMRG00000020359 ##22 ENSSMRG00000020358 ##22 ENSSMRG00000020357 ##22 CHRM1 (ENSSMRG00000020355) #24 DPF2 (ENSSMRG00000020354) POLA2 (ENSSMRG00000020352) RBM14 (ENSSMRG00000020351) CCS (ENSSMRG00000020350) ENSSMRG00000020349 ENSSMRG00000020348 SPTBN2 (ENSSMRG00000020347) ENSSMRG00000020346 RCE1 (ENSSMRG00000020343) ACTN3 (ENSSMRG00000020342) ENSSMRG00000020340 SF3B2 (ENSSMRG00000020336) Toxicofera ANCESTRAL SPECIES 28 ENSGT00940000162317 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Elapidae ANCESTRAL SPECIES 27 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 Elapidae_a DUPLICATION Elapidae_a ANCESTRAL SPECIES 43 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00390000015815 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b Eastern brown snake MODERN SPECIES 85 FIBP (ENSPTXG00000010975) ENSPTXG00000010974 FOSL1 (ENSPTXG00000010973) BBS1 (ENSPTXG00000010881) ENSPTXG00000010872 DPP3 (ENSPTXG00000010869) PELI3 (ENSPTXG00000010866) DRAP1 (ENSPTXG00000010864) C11orf68 (ENSPTXG00000010863) RELA (ENSPTXG00000010343) KAT5 (ENSPTXG00000010339) ENSPTXG00000010338 AP5B1 (ENSPTXG00000010337) ENSPTXG00000010336 ##22 ENSPTXG00000010331 ##22 ENSPTXG00000010225 ##22 ENSPTXG00000010206 ##22 ENSPTXG00000010123 ##22 DPF2 (ENSPTXG00000010121) CDC42EP2 (ENSPTXG00000010120) ENSPTXG00000010119 CAPN1 (ENSPTXG00000010118) SPDYC (ENSPTXG00000010117) SYVN1 (ENSPTXG00000010116) SLAMF8 (ENSPTXG00000010114) CFAP45 (ENSPTXG00000010113) ENSPTXG00000010112 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010091 ENSPTXG00000010089 ENSPTXG00000010088 Blue-lipped sea krait MODERN SPECIES 5737 OVOL1 (ENSLLTG00000015715) ENSLLTG00000015730 ##22 ENSLLTG00000015771 ##22 ENSLLTG00000003127 ##22 TAGLN2 (ENSLLTG00000003142) CFAP45 (ENSLLTG00000003162) ENSLLTG00000003175 ENSLLTG00000003185 SLAMF8 (ENSLLTG00000003209) SYVN1 (ENSLLTG00000003234) SPDYC (ENSLLTG00000003290) CAPN1 (ENSLLTG00000003332) ENSLLTG00000003375 Elapidae_a ANCESTRAL SPECIES 43 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000154901.C.b.f.b.b.a.b.b ##22 Mainland tiger snake MODERN SPECIES 1014 ENSNSUG00000002171 ##22 ENSNSUG00000002165 ##22 Blue-lipped sea krait MODERN SPECIES 4292 ENSLLTG00000009509 ##22 ENSLLTG00000009064 ##22 ENSLLTG00000008818 ##22 DPF2 (ENSLLTG00000008775) CDC42EP2 (ENSLLTG00000008755) POLA2 (ENSLLTG00000008720) ENSLLTG00000008694 Indian cobra MODERN SPECIES 17 ENSNNAG00000016168 ENSNNAG00000016176 ENSNNAG00000003873 DPP3 (ENSNNAG00000003999) PELI3 (ENSNNAG00000004868) ENSNNAG00000004888 ENSNNAG00000004908 C11orf68 (ENSNNAG00000004981) RELA (ENSNNAG00000004992) ENSNNAG00000005022 ENSNNAG00000005042 AP5B1 (ENSNNAG00000005057) OVOL1 (ENSNNAG00000005073) ENSNNAG00000005118 ##22 ENSNNAG00000005405 ##22 ENSNNAG00000005756 ##22 ENSNNAG00000006165 ##22 ENSNNAG00000006513 ##22 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) ENSNNAG00000007258 ENSNNAG00000007266 Sauria ANCESTRAL SPECIES 40 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 Lepidosauria ANCESTRAL SPECIES 87 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00940000163054.b ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 Episquamata ANCESTRAL SPECIES 19 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01100000263573.b.b ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 Laterata ANCESTRAL SPECIES 62 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00940000154556 ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000163054.b ENSGT00960000189006 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 Common wall lizard MODERN SPECIES 7 ENSPMRG00000015216 FOSL1 (ENSPMRG00000015223) CCDC85B (ENSPMRG00000015226) FIBP (ENSPMRG00000015231) EFEMP2 (ENSPMRG00000015236) MUS81 (ENSPMRG00000015240) ENSPMRG00000015247 ENSPMRG00000015252 CFL1 (ENSPMRG00000015255) CD248 (ENSPMRG00000015263) AP5B1 (ENSPMRG00000015266) OVOL1 (ENSPMRG00000015270) ENSPMRG00000015277 ##22 ENSPMRG00000015281 ##22 ENSPMRG00000015284 ##22 ENSPMRG00000015298 ##22 ENSPMRG00000015308 ##22 CHRM1 (ENSPMRG00000015315) #24 DPF2 (ENSPMRG00000015322) CDC42EP2 (ENSPMRG00000015335) POLA2 (ENSPMRG00000015344) ENSPMRG00000015363 CDCA5 (ENSPMRG00000015393) ZFPL1 (ENSPMRG00000015397) VPS51 (ENSPMRG00000015399) ENSPMRG00000015412 TM7SF2 (ENSPMRG00000015418) ZNHIT2 (ENSPMRG00000015430) FAU (ENSPMRG00000015437) ENSPMRG00000015443 ENSPMRG00000015451 Argentine black and white tegu MODERN SPECIES 80 ENSSMRG00000020374 ENSSMRG00000020372 BBS1 (ENSSMRG00000020371) DPP3 (ENSSMRG00000020370) PELI3 (ENSSMRG00000020369) ENSSMRG00000020368 DRAP1 (ENSSMRG00000020367) C11orf68 (ENSSMRG00000020366) ENSSMRG00000020365 RELA (ENSSMRG00000020364) ENSSMRG00000020363 AP5B1 (ENSSMRG00000020362) OVOL1 (ENSSMRG00000020361) ENSSMRG00000020360 ##22 ENSSMRG00000020359 ##22 ENSSMRG00000020358 ##22 ENSSMRG00000020357 ##22 CHRM1 (ENSSMRG00000020355) #24 DPF2 (ENSSMRG00000020354) POLA2 (ENSSMRG00000020352) RBM14 (ENSSMRG00000020351) CCS (ENSSMRG00000020350) ENSSMRG00000020349 ENSSMRG00000020348 SPTBN2 (ENSSMRG00000020347) ENSSMRG00000020346 RCE1 (ENSSMRG00000020343) ACTN3 (ENSSMRG00000020342) ENSSMRG00000020340 SF3B2 (ENSSMRG00000020336) GAL3ST3 (ENSSMRG00000020335) Toxicofera ANCESTRAL SPECIES 28 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232 ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 Lizard DUPLICATION Lizard MODERN SPECIES 193 ENSACAG00000006380 ##22 ENSACAG00000040271 ##22 Lizard MODERN SPECIES 433 ENSACAG00000042907 ##22 Elapidae ANCESTRAL SPECIES 27 ENSGT00940000160034 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000169892 ENSGT00940000165064 Elapidae_a ANCESTRAL SPECIES 43 ENSGT00940000161630 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00940000161712.a ENSGT00940000161712.b ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 Acanthophiinae ANCESTRAL SPECIES 47 ENSGT00940000162317.a ENSGT00940000160034 ENSGT00390000005232.e ENSGT00390000007335 ENSGT00950000183050.b.b.b.a.b.b ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000162343 ENSGT00940000166023 ENSGT00530000064721 ENSGT00940000161363 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b.a ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784.l ENSGT01100000263515.a.b.a.b.b.h.f.c.a.b ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT01030000234540.C ENSGT00730000111174 ENSGT00940000158886 ENSGT00940000160444 ENSGT00940000161329 ENSGT01100000263515.a.b.a.b.b.h.f.c.b ENSGT01100000263515.a.b.a.b.b.g.b.a.a.c.a Eastern brown snake MODERN SPECIES 85 ENSPTXG00000010974 FOSL1 (ENSPTXG00000010973) BBS1 (ENSPTXG00000010881) ENSPTXG00000010872 DPP3 (ENSPTXG00000010869) PELI3 (ENSPTXG00000010866) DRAP1 (ENSPTXG00000010864) C11orf68 (ENSPTXG00000010863) RELA (ENSPTXG00000010343) KAT5 (ENSPTXG00000010339) ENSPTXG00000010338 AP5B1 (ENSPTXG00000010337) ENSPTXG00000010336 ##22 ENSPTXG00000010331 ##22 ENSPTXG00000010225 ##22 ENSPTXG00000010206 ##22 ENSPTXG00000010123 ##22 DPF2 (ENSPTXG00000010121) CDC42EP2 (ENSPTXG00000010120) ENSPTXG00000010119 CAPN1 (ENSPTXG00000010118) SPDYC (ENSPTXG00000010117) SYVN1 (ENSPTXG00000010116) SLAMF8 (ENSPTXG00000010114) CFAP45 (ENSPTXG00000010113) ENSPTXG00000010112 IGSF9 (ENSPTXG00000010099) ENSPTXG00000010091 ENSPTXG00000010089 ENSPTXG00000010088 ENSPTXG00000010087 Mainland tiger snake MODERN SPECIES 708 ENSNSUG00000017271 ##22 ENSNSUG00000017270 ##22 DPF2 (ENSNSUG00000017262) CDC42EP2 (ENSNSUG00000017260) POLA2 (ENSNSUG00000017248) Blue-lipped sea krait MODERN SPECIES 4292 ENSLLTG00000009509 ##22 ENSLLTG00000009064 ##22 ENSLLTG00000008818 ##22 DPF2 (ENSLLTG00000008775) CDC42EP2 (ENSLLTG00000008755) POLA2 (ENSLLTG00000008720) ENSLLTG00000008694 Indian cobra MODERN SPECIES 17 ENSNNAG00000016176 ENSNNAG00000003873 DPP3 (ENSNNAG00000003999) PELI3 (ENSNNAG00000004868) ENSNNAG00000004888 ENSNNAG00000004908 C11orf68 (ENSNNAG00000004981) RELA (ENSNNAG00000004992) ENSNNAG00000005022 ENSNNAG00000005042 AP5B1 (ENSNNAG00000005057) OVOL1 (ENSNNAG00000005073) ENSNNAG00000005118 ##22 ENSNNAG00000005405 ##22 ENSNNAG00000005756 ##22 ENSNNAG00000006165 ##22 ENSNNAG00000006513 ##22 DPF2 (ENSNNAG00000006889) CDC42EP2 (ENSNNAG00000006965) CAPN1 (ENSNNAG00000006988) SPDYC (ENSNNAG00000007033) SYVN1 (ENSNNAG00000007062) ENSNNAG00000007087 ENSNNAG00000007113 CFAP45 (ENSNNAG00000007137) TAGLN2 (ENSNNAG00000007163) ENSNNAG00000007184 DUSP23 (ENSNNAG00000007247) ENSNNAG00000007258 ENSNNAG00000007266 ENSNNAG00000007287 tuatara MODERN SPECIES 1099 ENSSPUG00000000523 ENSSPUG00000000529 ENSSPUG00000000539 ENSSPUG00000000549 ENSSPUG00000000562 SYVN1 (ENSSPUG00000000566) CAPN1 (ENSSPUG00000000579) ENSSPUG00000000587 ENSSPUG00000000600 ENSSPUG00000000606 AP5B1 (ENSSPUG00000000608) ENSSPUG00000000637 ##22 ENSSPUG00000000660 ##22 ENSSPUG00000000702 ##22 ENSSPUG00000000706 ##22 ENSSPUG00000000714 ##22 DPF2 (ENSSPUG00000000759) POLA2 (ENSSPUG00000000790) ENSSPUG00000000842 KAT5 (ENSSPUG00000000847) ENSSPUG00000000958 ENSSPUG00000000963 CRABP2 (ENSSPUG00000000974) ISG20L2 (ENSSPUG00000000985) MRPL24 (ENSSPUG00000001037) HDGF (ENSSPUG00000001042) PRCC (ENSSPUG00000001049) SH2D2A (ENSSPUG00000001057) ENSSPUG00000001082 NTRK1 (ENSSPUG00000001153) ENSSPUG00000001182 Archelosauria ANCESTRAL SPECIES 38 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 Cryptodira ANCESTRAL SPECIES 17 ENSGT00940000155031 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853 ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00940000166053 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 Emydidae ANCESTRAL SPECIES 13 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a.i.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.a.a.i.b ##22 ENSGT00940000154901.C.b.f.b.a.a.j ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 painted turtle MODERN SPECIES 2386 ATL3 (ENSCPBG00000023529) ENSCPBG00000023531 ENSCPBG00000023534 ENSCPBG00000023535 ENSCPBG00000023537 ENSCPBG00000023542 LGALS12 (ENSCPBG00000023548) ENSCPBG00000023549 ##22 ENSCPBG00000023553 ##22 ENSCPBG00000023557 ##22 ENSCPBG00000023560 ##22 ENSCPBG00000023582 ##22 ENSCPBG00000023584 ##22 ENSCPBG00000023590 ##22 ENSCPBG00000023602 ##22 ENSCPBG00000023604 ##22 ENSCPBG00000023608 ##22 DPF2 (ENSCPBG00000023614) CHRM1 (ENSCPBG00000023618) #24 POLA2 (ENSCPBG00000023619) CAPN1 (ENSCPBG00000023622) SPDYC (ENSCPBG00000023629) SYVN1 (ENSCPBG00000023630) ENSCPBG00000023634 ENSCPBG00000023636 FAU (ENSCPBG00000023637) ZNHIT2 (ENSCPBG00000023638) TM7SF2 (ENSCPBG00000023641) ENSCPBG00000023643 VPS51 (ENSCPBG00000023645) ZFPL1 (ENSCPBG00000023648) Three-toed box turtle MODERN SPECIES 33 RCOR2 (ENSTMTG00000002058) MARK2 (ENSTMTG00000002082) ENSTMTG00000002131 ENSTMTG00000002140 ZFTA (ENSTMTG00000002149) ENSTMTG00000002155 ATL3 (ENSTMTG00000002166) ENSTMTG00000002174 ENSTMTG00000002196 ENSTMTG00000002243 ENSTMTG00000002253 ENSTMTG00000002262 LGALS12 (ENSTMTG00000002278) ENSTMTG00000002287 ##22 ENSTMTG00000002299 ##22 ENSTMTG00000002322 ##22 ENSTMTG00000002391 ##22 CHRM1 (ENSTMTG00000002487) #24 DPF2 (ENSTMTG00000002493) CDC42EP2 (ENSTMTG00000002496) POLA2 (ENSTMTG00000002499) CAPN1 (ENSTMTG00000002515) SPDYC (ENSTMTG00000002540) SYVN1 (ENSTMTG00000002548) ENSTMTG00000002555 MRPL49 (ENSTMTG00000002564) FAU (ENSTMTG00000002567) ZNHIT2 (ENSTMTG00000002573) TM7SF2 (ENSTMTG00000002585) ENSTMTG00000002591 VPS51 (ENSTMTG00000002597) Testudinidae ANCESTRAL SPECIES 5 ENSGT00940000155031 ENSGT00950000185472 ENSGT00600000084617 ENSGT00940000157482 ENSGT00940000158566 ENSGT00940000154853.a ENSGT00940000162660.b.e.a.b ENSGT00940000154853.b ENSGT00940000162660.b.e.a.a ENSGT00940000162660.b.e.b.a ENSGT00940000162660.b.f ENSGT00940000161499 ENSGT00940000154901.C.b.f.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.a ##22 ENSGT00940000154901.C.b.f.b.b.a.b ##22 ENSGT00940000154901.C.b.f.b.b.b ##22 ENSGT00940000154901.C.b.f.b.a.b ##22 ENSGT00940000162301 #24 ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147.f ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253.o ENSGT00390000007479.`b ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00940000162464 ENSGT00390000001738 ENSGT00390000009753 Goode s thornscrub tortoise MODERN SPECIES 21 MARK2 (ENSGEVG00005012049) ENSGEVG00005011921 ENSGEVG00005011885 ZFTA (ENSGEVG00005011808) ENSGEVG00005011707 ATL3 (ENSGEVG00005011679) ENSGEVG00005011654 ENSGEVG00005011526 ENSGEVG00005011491 ENSGEVG00005011390 ENSGEVG00005011291 ENSGEVG00005011225 LGALS12 (ENSGEVG00005011151) ENSGEVG00005010707 ##22 ENSGEVG00005010042 ##22 ENSGEVG00005009473 ##22 ENSGEVG00005008720 ##22 CHRM1 (ENSGEVG00005008602) #24 DPF2 (ENSGEVG00005008558) CDC42EP2 (ENSGEVG00005008521) POLA2 (ENSGEVG00005008496) CAPN1 (ENSGEVG00005008420) SPDYC (ENSGEVG00005008396) SYVN1 (ENSGEVG00005008363) ENSGEVG00005008319 MRPL49 (ENSGEVG00005008293) ENSGEVG00005008268 ZNHIT2 (ENSGEVG00005008244) TM7SF2 (ENSGEVG00005008228) ENSGEVG00005008211 VPS51 (ENSGEVG00005008186) Abingdon island giant tortoise MODERN SPECIES 2278 ENSCABG00000000734 ZFTA (ENSCABG00000000736) ENSCABG00000000737 ATL3 (ENSCABG00000000739) ENSCABG00000000740 ENSCABG00000000743 ENSCABG00000000745 ENSCABG00000000747 ENSCABG00000000756 ENSCABG00000000809 LGALS12 (ENSCABG00000000816) ENSCABG00000000918 ENSCABG00000000934 ##22 ENSCABG00000001060 ##22 ENSCABG00000001301 ##22 ENSCABG00000001338 ##22 ENSCABG00000001482 ##22 CHRM1 (ENSCABG00000001601) #24 DPF2 (ENSCABG00000001614) CDC42EP2 (ENSCABG00000001686) POLA2 (ENSCABG00000001701) CAPN1 (ENSCABG00000001957) SPDYC (ENSCABG00000002961) SYVN1 (ENSCABG00000002965) ENSCABG00000002969 MRPL49 (ENSCABG00000002973) FAU (ENSCABG00000002974) ZNHIT2 (ENSCABG00000002976) TM7SF2 (ENSCABG00000002977) Chinese turtle MODERN SPECIES 2112 LGALS12 (ENSPSIG00000012610) ENSPSIG00000012542 ##22 ENSPSIG00000012508 ##22 ENSPSIG00000012485 ##22 ENSPSIG00000011590 ##22 ENSPSIG00000011491 ##22 CHRM1 (ENSPSIG00000000656) #24 DPF2 (ENSPSIG00000010805) CDC42EP2 (ENSPSIG00000000649) POLA2 (ENSPSIG00000010575) CAPN1 (ENSPSIG00000008053) SPDYC (ENSPSIG00000007826) SYVN1 (ENSPSIG00000006560) ENSPSIG00000006533 FAU (ENSPSIG00000006273) ZNHIT2 (ENSPSIG00000006244) TM7SF2 (ENSPSIG00000006053) VPS51 (ENSPSIG00000005609) ZFPL1 (ENSPSIG00000005590) CDCA5 (ENSPSIG00000005587)