Euteleostomi ANCESTRAL SPECIES ENSGT00940000154172 #22 Sarcopterygii ANCESTRAL SPECIES ENSGT00940000154172 #22 Tetrapoda ANCESTRAL SPECIES ENSGT00940000154172 #22 Amniota ANCESTRAL SPECIES 28 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 ENSGT00390000008274 ENSGT00940000164585.d ENSGT00390000002869 ENSGT00940000160475 ENSGT00940000161854 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000161276.A ENSGT00940000162465 #16 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000154197 #23 ENSGT00940000160047 #24 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000154996.a.a ENSGT00940000165314 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000160649 #36 Mammalia ANCESTRAL SPECIES 25 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000161276.A ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00960000189301 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000161937 #25 ENSGT00940000154467.a #19 ENSGT00940000154172 #22 ENSGT00940000154197 #23 ENSGT00940000160047 #24 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000160649 #36 ENSGT00390000000698 ENSGT00390000014244 Theria ANCESTRAL SPECIES 3 ENSGT00940000161854 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00910000144375 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a #19 ENSGT00940000154172 #22 ENSGT00940000154197 #23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000162698 #35 Eutheria ANCESTRAL SPECIES ENSGT00940000161986 ENSGT00940000161896 ENSGT00910000144375 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000162657 ENSGT00940000163498 #15 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000162698 #35 Atlantogenata ANCESTRAL SPECIES 66 ENSGT00730000111554 ENSGT00940000163498 #15 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.a.a #23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Afrotheria ANCESTRAL SPECIES 76 ENSGT00940000163498 #15 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.a.a #23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 Afrotheria_a ANCESTRAL SPECIES 75 ENSGT00940000163498 #15 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.a.a #23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 Elephant MODERN SPECIES 26 BORA (ENSLAFG00000028627) #7 MZT1 (ENSLAFG00000011001) #8 DACH1 (ENSLAFG00000002947) #9 KLHL1 (ENSLAFG00000011623) #10 ENSLAFG00000028368 #11 ENSLAFG00000027220 #12 ENSLAFG00000026382 #13 ENSLAFG00000013745 #14 ENSLAFG00000010326 #15 CRNN (ENSLAFG00000011853) #16 ENSLAFG00000023048 #17 ENSLAFG00000031062 #18 RPTN (ENSLAFG00000032727) #19 ENSLAFG00000027202 #20 ENSLAFG00000011588 #21 S100A11 (ENSLAFG00000026763) #22 ENSLAFG00000011183 #23 THEM4 (ENSLAFG00000028908) #24 THEM5 (ENSLAFG00000020836) #25 RORC (ENSLAFG00000020960) #26 LINGO4 (ENSLAFG00000006279) #27 TDRKH (ENSLAFG00000006274) #28 OAZ3 (ENSLAFG00000006273) #29 ENSLAFG00000006271 #30 RIIAD1 (ENSLAFG00000027191) #31 CELF3 (ENSLAFG00000030147) #32 SNX27 (ENSLAFG00000013322) #33 TUFT1 (ENSLAFG00000011926) #34 ENSLAFG00000011923 #35 POGZ (ENSLAFG00000011913) #36 ENSLAFG00000029025 #37 Hyrax MODERN SPECIES 11344 S100A11 (ENSPCAG00000016889) #22 Tenrec MODERN SPECIES 5382 S100A11 (ENSETEG00000006272) #22 Xenarthra ANCESTRAL SPECIES 1096 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.a.a #23 ENSGT00940000160047 #24 Armadillo MODERN SPECIES 2990 ENSDNOG00000031297 ENSDNOG00000044093 #20 ENSDNOG00000015095 #21 ENSDNOG00000039553 S100A11 (ENSDNOG00000045817) #22 ENSDNOG00000011425 #23 ENSDNOG00000005970 #24 Sloth MODERN SPECIES 4938 ENSCHOG00000000175 #22 Boreoeutheria ANCESTRAL SPECIES ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163498 #15 ENSGT00940000165404 ENSGT00940000163905 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000162698 #35 Laurasiatheria ANCESTRAL SPECIES ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163498 #15 ENSGT00940000165404 ENSGT00940000163905 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00730000111580 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 #15 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a.h.a #19 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905 ENSGT00940000165404 ENSGT00940000163498 #15 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Carnivora ANCESTRAL SPECIES 1 ENSGT00440000039991 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Caniformia ANCESTRAL SPECIES 31 ENSGT00940000163248 ENSGT00940000164168 ENSGT00440000039991 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Caniformia_b ANCESTRAL SPECIES 35 ENSGT00730000111592 ENSGT00940000163019 ENSGT00940000163248 ENSGT00940000164168 ENSGT00440000039991 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b.y.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Mustelinae ANCESTRAL SPECIES 81 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b.y.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Ferret DUPLICATION Ferret MODERN SPECIES 429 ENSMPUG00000018794 #22 OPRM1 (ENSMPUG00000001963) IPCEF1 (ENSMPUG00000001967) CNKSR3 (ENSMPUG00000001970) SCAF8 (ENSMPUG00000001974) ENSMPUG00000001980 TIAM2 (ENSMPUG00000002005) TFB1M (ENSMPUG00000002073) CLDN20 (ENSMPUG00000018795) NOX3 (ENSMPUG00000002076) Ferret MODERN SPECIES 398 ENSMPUG00000003475 #18 ENSMPUG00000003479 ENSMPUG00000003481 ##19 ENSMPUG00000003484 #19 ENSMPUG00000003490 #20 ENSMPUG00000003496 TCHHL1 (ENSMPUG00000003502) #21 ENSMPUG00000003509 #22 ENSMPUG00000003517 ##23 ENSMPUG00000003526 #24 THEM5 (ENSMPUG00000003530) #25 ENSMPUG00000003542 RORC (ENSMPUG00000003550) #26 LINGO4 (ENSMPUG00000018420) #27 TDRKH (ENSMPUG00000003558) #28 OAZ3 (ENSMPUG00000003571) #29 MRPL9 (ENSMPUG00000003590) #30 RIIAD1 (ENSMPUG00000003602) #31 CELF3 (ENSMPUG00000003617) #32 SNX27 (ENSMPUG00000003631) #33 TUFT1 (ENSMPUG00000003694) #34 ENSMPUG00000003701 #35 ENSMPUG00000003710 American mink MODERN SPECIES 316 ENSNVIG00000014136 ##19 RPTN (ENSNVIG00000014147) #19 TCHHL1 (ENSNVIG00000014160) #21 S100A11 (ENSNVIG00000014167) #22 S100A10 (ENSNVIG00000014176) ##23 THEM4 (ENSNVIG00000014185) #24 THEM5 (ENSNVIG00000014205) #25 C2CD4D (ENSNVIG00000014218) RORG (ENSNVIG00000014222) #26 LINGO4 (ENSNVIG00000014264) #27 TDRKH (ENSNVIG00000014276) #28 OAZ3 (ENSNVIG00000014414) #29 MRPL9 (ENSNVIG00000014498) #30 RIIAD1 (ENSNVIG00000014540) #31 CELF3 (ENSNVIG00000014558) #32 SNX27 (ENSNVIG00000014632) #33 TUFT1 (ENSNVIG00000014726) #34 ENSNVIG00000014806 #35 POGZ (ENSNVIG00000014867) #36 Ursidae DUPLICATION Ursidae DUPLICATION Ursidae ANCESTRAL SPECIES ENSGT00940000154172.g.a #22 Giant Panda MODERN SPECIES 1096 ENSAMEG00000029340 #22 Ursidae ANCESTRAL SPECIES ENSGT00940000163019 ENSGT00940000163248 ENSGT00940000164168 ENSGT00440000039991 ENSGT00950000183301 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00730000111580 ENSGT00940000163905 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000162966 #21 ENSGT00940000154172.g.b #22 ENSGT00940000154197.b.b.y.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 Ursus ANCESTRAL SPECIES 18 ENSGT00940000153229.B ENSGT00390000002634.b ENSGT00940000153231.B ENSGT01100000263525.a.b.b.c.b ENSGT00950000185586 ENSGT00940000163248 ENSGT00940000164168 ENSGT00440000039991 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000162966 #21 ENSGT00940000154172.g.b #22 ENSGT00940000154197.b.b.y.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 Polar bear MODERN SPECIES 193 ENSUMAG00000001108 PGLYRP4 (ENSUMAG00000001126) PGLYRP3 (ENSUMAG00000001171) ENSUMAG00000001191 ENSUMAG00000001205 ENSUMAG00000001215 ENSUMAG00000001231 SMCP (ENSUMAG00000001235) ENSUMAG00000001281 ENSUMAG00000001292 #16 ENSUMAG00000001308 #17 ENSUMAG00000001321 ##19 ENSUMAG00000001326 #19 TCHHL1 (ENSUMAG00000001361) #21 S100A11 (ENSUMAG00000001371) #22 ENSUMAG00000001376 ##23 THEM4 (ENSUMAG00000001386) #24 THEM5 (ENSUMAG00000001423) #25 RORC (ENSUMAG00000001429) #26 LINGO4 (ENSUMAG00000001441) #27 TDRKH (ENSUMAG00000001456) #28 OAZ3 (ENSUMAG00000001672) #29 MRPL9 (ENSUMAG00000001723) #30 ENSUMAG00000001727 RIIAD1 (ENSUMAG00000001735) #31 CELF3 (ENSUMAG00000001772) #32 SNX27 (ENSUMAG00000001910) #33 TUFT1 (ENSUMAG00000002225) #34 ENSUMAG00000002267 #35 POGZ (ENSUMAG00000002469) #36 American black bear MODERN SPECIES 2426 RPTN (ENSUAMG00000018501) #19 TCHHL1 (ENSUAMG00000018500) #21 S100A11 (ENSUAMG00000018498) #22 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 11 BCAR3 (ENSAMEG00000009691) FNBP1L (ENSAMEG00000009719) DR1 (ENSAMEG00000009760) CCDC18 (ENSAMEG00000009774) TMED5 (ENSAMEG00000009807) MTF2 (ENSAMEG00000009820) DIPK1A (ENSAMEG00000009868) RPL5 (ENSAMEG00000009878) EVI5 (ENSAMEG00000009896) GFI1 (ENSAMEG00000031156) RPAP2 (ENSAMEG00000013862) ENSAMEG00000013877 ENSAMEG00000013910 ENSAMEG00000030276 ENSAMEG00000000576 ENSAMEG00000004215 #22 BRDT (ENSAMEG00000000536) TGFBR3 (ENSAMEG00000000512) CDC7 (ENSAMEG00000000492) HFM1 (ENSAMEG00000000432) ZNF644 (ENSAMEG00000008669) BARHL2 (ENSAMEG00000029067) ZNF326 (ENSAMEG00000000495) LRRC8D (ENSAMEG00000019318) LRRC8C (ENSAMEG00000000489) LRRC8B (ENSAMEG00000000485) ENSAMEG00000009341 ENSAMEG00000000434 ENSAMEG00000028362 ENSAMEG00000009306 GBP1 (ENSAMEG00000016105) Giant Panda MODERN SPECIES 11 ENSAMEG00000018792 ENSAMEG00000025202 SMCP (ENSAMEG00000019350) ENSAMEG00000027287 ENSAMEG00000027951 ENSAMEG00000011369 ENSAMEG00000028140 C1orf68 (ENSAMEG00000023884) ENSAMEG00000028600 ENSAMEG00000025755 #16 ENSAMEG00000028230 #17 ENSAMEG00000029891 ENSAMEG00000024220 ##19 RPTN (ENSAMEG00000028886) #19 TCHHL1 (ENSAMEG00000004225) #21 ENSAMEG00000030837 #22 S100A10 (ENSAMEG00000000350) ##23 THEM4 (ENSAMEG00000000355) #24 THEM5 (ENSAMEG00000000361) #25 RORC (ENSAMEG00000000363) #26 LINGO4 (ENSAMEG00000019097) #27 TDRKH (ENSAMEG00000000421) #28 OAZ3 (ENSAMEG00000000484) #29 ENSAMEG00000000491 #30 RIIAD1 (ENSAMEG00000029312) #31 CELF3 (ENSAMEG00000000509) #32 SNX27 (ENSAMEG00000000540) #33 TUFT1 (ENSAMEG00000000574) #34 ENSAMEG00000000601 #35 POGZ (ENSAMEG00000000622) #36 PSMB4 (ENSAMEG00000000645) Ursidae ANCESTRAL SPECIES ENSGT00940000154172.h #22 Giant Panda MODERN SPECIES 1137 ENSAMEG00000031101 #22 Canidae ANCESTRAL SPECIES 18 ENSGT00940000163248.k ENSGT00940000164168 ENSGT00440000039991 ENSGT00780000122937 ENSGT00950000183312 ENSGT00940000176100.e ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b.ab ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Red fox DUPLICATION Red fox MODERN SPECIES 176 ENSVVUG00000013725 ##19 RPTN (ENSVVUG00000013723) #19 ENSVVUG00000013722 #20 TCHHL1 (ENSVVUG00000013717) #21 ENSVVUG00000013706 ENSVVUG00000013702 #22 ENSVVUG00000013698 ##23 THEM4 (ENSVVUG00000013687) #24 THEM5 (ENSVVUG00000013676) #25 RORC (ENSVVUG00000013598) #26 LINGO4 (ENSVVUG00000013594) #27 TDRKH (ENSVVUG00000013241) #28 OAZ3 (ENSVVUG00000013149) #29 MRPL9 (ENSVVUG00000013099) #30 ENSVVUG00000013087 ENSVVUG00000013083 #31 CELF3 (ENSVVUG00000013080) #32 ENSVVUG00000013078 #32 SNX27 (ENSVVUG00000013003) #33 ENSVVUG00000012997 TUFT1 (ENSVVUG00000012985) #34 Red fox MODERN SPECIES 96 GBA2 (ENSVVUG00000022031) CREB3 (ENSVVUG00000022263) TLN1 (ENSVVUG00000022470) TPM2 (ENSVVUG00000023722) CA9 (ENSVVUG00000024361) ARHGEF39 (ENSVVUG00000024381) CCDC107 (ENSVVUG00000024391) CD72 (ENSVVUG00000024399) TESK1 (ENSVVUG00000024439) FAM166B (ENSVVUG00000024481) ENSVVUG00000024486 ENSVVUG00000024493 ENSVVUG00000024505 UNC13B (ENSVVUG00000024650) ENSVVUG00000025993 ENSVVUG00000026015 #22 ENSVVUG00000026022 FAM214B (ENSVVUG00000026026) STOML2 (ENSVVUG00000026031) PIGO (ENSVVUG00000026057) FANCG (ENSVVUG00000026115) VCP (ENSVVUG00000026169) ENSVVUG00000026802 DNAJB5 (ENSVVUG00000026803) PHF24 (ENSVVUG00000026806) Canis_lupus ANCESTRAL SPECIES 10 ENSGT00940000163248.k ENSGT00940000164168 ENSGT01050000246051 ENSGT00780000122937 ENSGT00950000183312 ENSGT00940000176100.e ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b.ab ##23 ENSGT00940000160047 #24 ENSGT01090000260046.e.b.b.b.b ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281.o #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 Dingo MODERN SPECIES 223 ENSCAFG00020009355 ENSCAFG00020009390 ENSCAFG00020009395 LCE7A (ENSCAFG00020009396) ENSCAFG00020009400 KPRP (ENSCAFG00020009402) C1orf68 (ENSCAFG00020009403) ENSCAFG00020009418 #16 ENSCAFG00020009420 #17 ENSCAFG00020009424 ENSCAFG00020009446 ##19 ENSCAFG00020009450 ##19 TCHHL1 (ENSCAFG00020009462) #21 ENSCAFG00020009466 ENSCAFG00020009468 S100A11 (ENSCAFG00020009473) #22 S100A10 (ENSCAFG00020009496) ##23 THEM4 (ENSCAFG00020009499) #24 ENSCAFG00020009502 THEM5 (ENSCAFG00020009506) #25 RORC (ENSCAFG00020009513) #26 LINGO4 (ENSCAFG00020009599) #27 TDRKH (ENSCAFG00020009606) #28 OAZ3 (ENSCAFG00020009650) #29 ENSCAFG00020009687 #30 RIIAD1 (ENSCAFG00020009697) #31 CELF3 (ENSCAFG00020009731) #32 SNX27 (ENSCAFG00020009876) #33 TUFT1 (ENSCAFG00020010517) #34 ENSCAFG00020010534 #35 POGZ (ENSCAFG00020010728) #36 Dog MODERN SPECIES 8 ENSCAFG00845026294 ENSCAFG00845026168 ENSCAFG00845026131 ENSCAFG00845026059 C1orf68 (ENSCAFG00845026034) ENSCAFG00845025984 ENSCAFG00845025948 #16 ENSCAFG00845025920 #17 ENSCAFG00845025895 #18 ENSCAFG00845025860 ##19 RPTN (ENSCAFG00845025826) #19 ENSCAFG00845025766 #20 TCHHL1 (ENSCAFG00845025618) #21 ENSCAFG00845025590 ENSCAFG00845025548 ENSCAFG00845025500 #22 S100A10 (ENSCAFG00845025458) ##23 THEM4 (ENSCAFG00845025388) #24 ENSCAFG00845025367 THEM5 (ENSCAFG00845025312) #25 ENSCAFG00845025285 RORC (ENSCAFG00845025144) #26 LINGO4 (ENSCAFG00845025100) #27 TDRKH (ENSCAFG00845024938) #28 OAZ3 (ENSCAFG00845024748) #29 ENSCAFG00845024650 #30 ENSCAFG00845024612 RIIAD1 (ENSCAFG00845024568) #31 CELF3 (ENSCAFG00845024380) #32 SNX27 (ENSCAFG00845024124) #33 TUFT1 (ENSCAFG00845023851) #34 Felidae ANCESTRAL SPECIES 10 ENSGT00440000039991 ENSGT00780000122937 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.a.h.a #19 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000162698 #35 Panthera ANCESTRAL SPECIES 40 ENSGT00440000039991 ENSGT00780000122937 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905.e ENSGT00940000163905.f ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000162698 #35 Tiger MODERN SPECIES 275 ENSPTIG00000006961 ENSPTIG00000006953 ENSPTIG00000006948 ENSPTIG00000006897 C1orf68 (ENSPTIG00000006854) ENSPTIG00000006839 ENSPTIG00000006837 LCE5A (ENSPTIG00000006817) CRNN (ENSPTIG00000015000) #16 ENSPTIG00000014745 #17 RPTN (ENSPTIG00000013862) #19 TCHHL1 (ENSPTIG00000013468) #21 S100A11 (ENSPTIG00000012739) #22 S100A10 (ENSPTIG00000012263) ##23 THEM4 (ENSPTIG00000011246) #24 THEM5 (ENSPTIG00000010208) #25 RORC (ENSPTIG00000008094) #26 LINGO4 (ENSPTIG00000006738) #27 TDRKH (ENSPTIG00000019916) #28 OAZ3 (ENSPTIG00000018493) #29 MRPL9 (ENSPTIG00000017020) #30 ENSPTIG00000016080 CELF3 (ENSPTIG00000013450) #32 SNX27 (ENSPTIG00000011081) #33 TUFT1 (ENSPTIG00000007975) #34 ENSPTIG00000006973 #35 POGZ (ENSPTIG00000020597) #36 PSMB4 (ENSPTIG00000019518) Panthera_a ANCESTRAL SPECIES 38 ENSGT00940000163905.e ENSGT00940000163905.f ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000160649 #36 leopard DUPLICATION leopard MODERN SPECIES 27 TSFM (ENSPPRG00000009667) AVIL (ENSPPRG00000008022) CTDSP2 (ENSPPRG00000007688) ATP23 (ENSPPRG00000006940) LRIG3 (ENSPPRG00000005844) SLC16A7 (ENSPPRG00000004556) ENSPPRG00000003806 ENSPPRG00000017098 TAFA2 (ENSPPRG00000002926) USP15 (ENSPPRG00000001415) MON2 (ENSPPRG00000000598) ENSPPRG00000015715 PPM1H (ENSPPRG00000014120) AVPR1A (ENSPPRG00000013507) RXYLT1 (ENSPPRG00000012565) ENSPPRG00000011955 #22 SRGAP1 (ENSPPRG00000011479) ENSPPRG00000009845 ENSPPRG00000008524 KICS2 (ENSPPRG00000008288) C12orf56 (ENSPPRG00000007840) XPOT (ENSPPRG00000005552) TBK1 (ENSPPRG00000005054) RASSF3 (ENSPPRG00000004564) GNS (ENSPPRG00000003802) TBC1D30 (ENSPPRG00000003043) WIF1 (ENSPPRG00000001914) ENSPPRG00000001788 LEMD3 (ENSPPRG00000001191) MSRB3 (ENSPPRG00000000826) HMGA2 (ENSPPRG00000022627) leopard MODERN SPECIES 149 ENSPPRG00000022177 ENSPPRG00000022208 CRCT1 (ENSPPRG00000022224) LCE5A (ENSPPRG00000013328) CRNN (ENSPPRG00000013371) #16 ENSPPRG00000016115 #17 RPTN (ENSPPRG00000016821) #19 ENSPPRG00000023830 #22 S100A10 (ENSPPRG00000023731) ##23 THEM4 (ENSPPRG00000023499) #24 THEM5 (ENSPPRG00000023321) #25 C2CD4D (ENSPPRG00000022384) RORC (ENSPPRG00000000165) #26 LINGO4 (ENSPPRG00000022395) #27 TDRKH (ENSPPRG00000001585) #28 OAZ3 (ENSPPRG00000002633) #29 MRPL9 (ENSPPRG00000003556) #30 RIIAD1 (ENSPPRG00000003657) #31 CELF3 (ENSPPRG00000004600) #32 SNX27 (ENSPPRG00000012629) #33 TUFT1 (ENSPPRG00000020942) #34 CGN (ENSPPRG00000024471) POGZ (ENSPPRG00000023722) #36 lion DUPLICATION lion MODERN SPECIES 7 CYP27B1 (ENSPLOG00000008308) METTL1 (ENSPLOG00000008356) EEF1AKMT3 (ENSPLOG00000008400) TSFM (ENSPLOG00000008446) AVIL (ENSPLOG00000008566) CTDSP2 (ENSPLOG00000008613) ATP23 (ENSPLOG00000008681) LRIG3 (ENSPLOG00000008745) SLC16A7 (ENSPLOG00000008868) TAFA2 (ENSPLOG00000008909) USP15 (ENSPLOG00000009055) MON2 (ENSPLOG00000009437) PPM1H (ENSPLOG00000010670) AVPR1A (ENSPLOG00000010693) RXYLT1 (ENSPLOG00000010730) ENSPLOG00000010772 #22 SRGAP1 (ENSPLOG00000010901) ENSPLOG00000011207 KICS2 (ENSPLOG00000011238) C12orf56 (ENSPLOG00000011329) XPOT (ENSPLOG00000011399) TBK1 (ENSPLOG00000011663) RASSF3 (ENSPLOG00000012341) ENSPLOG00000012466 GNS (ENSPLOG00000012618) TBC1D30 (ENSPLOG00000012961) WIF1 (ENSPLOG00000013136) ENSPLOG00000013231 LEMD3 (ENSPLOG00000013267) MSRB3 (ENSPLOG00000013315) HMGA2 (ENSPLOG00000013496) lion MODERN SPECIES 8 TBX15 (ENSPLOG00000011860) WARS2 (ENSPLOG00000011821) HAO2 (ENSPLOG00000011694) ENSPLOG00000011592 ZNF697 (ENSPLOG00000011563) PHGDH (ENSPLOG00000011111) HMGCS2 (ENSPLOG00000010925) REG4 (ENSPLOG00000010847) NOTCH2 (ENSPLOG00000010680) SEC22B (ENSPLOG00000010603) PDE4DIP (ENSPLOG00000009882) ENSPLOG00000009717 ##19 RPTN (ENSPLOG00000009684) #19 ENSPLOG00000009645 #20 TCHHL1 (ENSPLOG00000009612) #21 ENSPLOG00000009583 #22 S100A10 (ENSPLOG00000009560) ##23 THEM4 (ENSPLOG00000009530) #24 THEM5 (ENSPLOG00000009488) #25 C2CD4D (ENSPLOG00000009475) RORC (ENSPLOG00000009361) #26 LINGO4 (ENSPLOG00000009326) #27 TDRKH (ENSPLOG00000009153) #28 OAZ3 (ENSPLOG00000008964) #29 MRPL9 (ENSPLOG00000008857) #30 RIIAD1 (ENSPLOG00000008817) #31 CELF3 (ENSPLOG00000008678) #32 SNX27 (ENSPLOG00000008397) #33 TUFT1 (ENSPLOG00000008146) #34 CGN (ENSPLOG00000007937) POGZ (ENSPLOG00000007770) #36 lion MODERN SPECIES 3 SIGLEC1 (ENSPLOG00000001799) HSPA12B (ENSPLOG00000001765) ADISSP (ENSPLOG00000001739) CENPB (ENSPLOG00000001702) CDC25B (ENSPLOG00000001506) AP5S1 (ENSPLOG00000001418) MAVS (ENSPLOG00000001398) PANK2 (ENSPLOG00000001364) RNF24 (ENSPLOG00000001349) SMOX (ENSPLOG00000001303) ADRA1D (ENSPLOG00000001254) ENSPLOG00000001238 PRNP (ENSPLOG00000001229) PRND (ENSPLOG00000001217) RASSF2 (ENSPLOG00000001181) ENSPLOG00000001157 #22 SLC23A2 (ENSPLOG00000001143) ENSPLOG00000001113 PCNA (ENSPLOG00000001088) CDS2 (ENSPLOG00000000983) PROKR2 (ENSPLOG00000000967) GPCPD1 (ENSPLOG00000000931) SHLD1 (ENSPLOG00000000905) CHGB (ENSPLOG00000000880) TRMT6 (ENSPLOG00000000851) MCM8 (ENSPLOG00000000805) CRLS1 (ENSPLOG00000000747) LRRN4 (ENSPLOG00000000712) FERMT1 (ENSPLOG00000000673) BMP2 (ENSPLOG00000000644) HAO1 (ENSPLOG00000000623) Cat DUPLICATION Cat MODERN SPECIES 1 GRM7 (ENSFCAG00000029003) ENSFCAG00000029757 EDEM1 (ENSFCAG00000000737) ARL8B (ENSFCAG00000000736) BHLHE40 (ENSFCAG00000034238) ITPR1 (ENSFCAG00000002477) SUMF1 (ENSFCAG00000011512) ENSFCAG00000037787 LRRN1 (ENSFCAG00000029530) CRBN (ENSFCAG00000026512) TRNT1 (ENSFCAG00000026805) IL5RA (ENSFCAG00000000652) CNTN4 (ENSFCAG00000000649) ENSFCAG00000052641 CNTN6 (ENSFCAG00000015456) ENSFCAG00000034166 #22 CHL1 (ENSFCAG00000011105) ENSFCAG00000005652 CNTN3 (ENSFCAG00000012778) PDZRN3 (ENSFCAG00000040417) PPP4R2 (ENSFCAG00000029481) GXYLT2 (ENSFCAG00000011005) SHQ1 (ENSFCAG00000012781) RYBP (ENSFCAG00000043691) PROK2 (ENSFCAG00000032697) GPR27 (ENSFCAG00000041717) EIF4E3 (ENSFCAG00000025548) FOXP1 (ENSFCAG00000023059) MDFIC2 (ENSFCAG00000026251) MITF (ENSFCAG00000024419) ENSFCAG00000034689 Cat MODERN SPECIES 239 LCE7A (ENSFCAG00000053780) KPRP (ENSFCAG00000039269) ENSFCAG00000034900 C1orf68 (ENSFCAG00000036698) ENSFCAG00000040599 LCE3B (ENSFCAG00000045888) ENSFCAG00000044273 CRNN (ENSFCAG00000045642) #16 ENSFCAG00000044571 #17 ENSFCAG00000053766 #19 HRNR (ENSFCAG00000049092) ##19 ENSFCAG00000048765 RPTN (ENSFCAG00000040577) #19 ENSFCAG00000045818 #20 TCHHL1 (ENSFCAG00000046571) #21 ENSFCAG00000041899 #22 S100A10 (ENSFCAG00000010423) ##23 THEM4 (ENSFCAG00000003443) #24 THEM5 (ENSFCAG00000010981) #25 C2CD4D (ENSFCAG00000026060) RORC (ENSFCAG00000018105) #26 LINGO4 (ENSFCAG00000010784) #27 TDRKH (ENSFCAG00000010980) #28 OAZ3 (ENSFCAG00000010979) #29 MRPL9 (ENSFCAG00000043355) #30 RIIAD1 (ENSFCAG00000019369) #31 CELF3 (ENSFCAG00000007908) #32 SNX27 (ENSFCAG00000041414) #33 TUFT1 (ENSFCAG00000004073) #34 CGN (ENSFCAG00000004072) #35 POGZ (ENSFCAG00000001864) #36 Cat MODERN SPECIES 2 ADISSP (ENSFCAG00000027273) SPEF1 (ENSFCAG00000048231) CENPB (ENSFCAG00000038057) CDC25B (ENSFCAG00000019152) AP5S1 (ENSFCAG00000034536) MAVS (ENSFCAG00000022983) PANK2 (ENSFCAG00000007477) RNF24 (ENSFCAG00000044276) SMOX (ENSFCAG00000003244) ADRA1D (ENSFCAG00000029041) ENSFCAG00000028982 ENSFCAG00000044886 PRNP (ENSFCAG00000031270) PRND (ENSFCAG00000001473) RASSF2 (ENSFCAG00000028725) ENSFCAG00000053205 #22 SLC23A2 (ENSFCAG00000024001) ENSFCAG00000036587 PCNA (ENSFCAG00000009068) CDS2 (ENSFCAG00000031257) ENSFCAG00000024563 PROKR2 (ENSFCAG00000035343) GPCPD1 (ENSFCAG00000018300) CHGB (ENSFCAG00000000220) TRMT6 (ENSFCAG00000003102) MCM8 (ENSFCAG00000011524) CRLS1 (ENSFCAG00000023647) LRRN4 (ENSFCAG00000001198) FERMT1 (ENSFCAG00000019220) ENSFCAG00000029904 BMP2 (ENSFCAG00000037659) Laurasiatheria_c ANCESTRAL SPECIES ENSGT01050000246051 ENSGT00780000122937 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00730000111580 ENSGT00940000163498 #15 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Chiroptera ANCESTRAL SPECIES 20 ENSGT01100000263946 ENSGT00940000163019 ENSGT00730000111626 ENSGT01050000246051 ENSGT00780000122937 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00730000111580 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Megabat MODERN SPECIES 1787 S100A11 (ENSPVAG00000007469) #22 Microchiroptera ANCESTRAL SPECIES 21 ENSGT00940000163019 ENSGT00730000111626 ENSGT01050000246051 ENSGT00780000122937 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00730000111580 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000164620 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Microbat DUPLICATION Microbat MODERN SPECIES 1088 LELP1 (ENSMLUG00000001448) ENSMLUG00000027933 ENSMLUG00000013964 ENSMLUG00000013963 ENSMLUG00000028866 SPRR4 (ENSMLUG00000013961) ENSMLUG00000002265 LCE3B (ENSMLUG00000002269) ENSMLUG00000025940 CRNN (ENSMLUG00000008478) #16 ENSMLUG00000022674 ##19 RPTN (ENSMLUG00000029225) #19 ENSMLUG00000029417 ENSMLUG00000013906 TCHHL1 (ENSMLUG00000013899) #21 ENSMLUG00000014653 #22 ENSMLUG00000005271 ##23 ENSMLUG00000027648 #24 THEM5 (ENSMLUG00000002239) #25 RORC (ENSMLUG00000029229) #26 LINGO4 (ENSMLUG00000002233) #27 TDRKH (ENSMLUG00000002213) #28 OAZ3 (ENSMLUG00000002207) #29 MRPL9 (ENSMLUG00000002204) #30 RIIAD1 (ENSMLUG00000029408) #31 CELF3 (ENSMLUG00000002193) #32 SNX27 (ENSMLUG00000002189) #33 TUFT1 (ENSMLUG00000002177) #34 ENSMLUG00000002171 #35 POGZ (ENSMLUG00000002157) #36 PSMB4 (ENSMLUG00000002149) Microbat MODERN SPECIES 1221 ENSMLUG00000008124 AP5M1 (ENSMLUG00000000778) EXOC5 (ENSMLUG00000000761) ENSMLUG00000029438 OTX2 (ENSMLUG00000022591) TMEM260 (ENSMLUG00000011735) PELI2 (ENSMLUG00000006603) ENSMLUG00000030717 #22 KTN1 (ENSMLUG00000006033) TBPL2 (ENSMLUG00000015690) ATG14 (ENSMLUG00000004893) ENSMLUG00000004886 Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 10 CEP192 (ENSRFEG00010009867) LDLRAD4 (ENSRFEG00010009771) FAM210A (ENSRFEG00010009722) RNMT (ENSRFEG00010009615) MC5R (ENSRFEG00010009585) MC2R (ENSRFEG00010009576) ENSRFEG00010009511 SLC41A3 (ENSRFEG00010009372) ALDH1L1 (ENSRFEG00010009061) ENSRFEG00010008962 KLF15 (ENSRFEG00010008935) CFAP100 (ENSRFEG00010008614) ZXDC (ENSRFEG00010008385) UROC1 (ENSRFEG00010008245) CHST13 (ENSRFEG00010008204) ENSRFEG00010008188 #22 TXNRD3 (ENSRFEG00010007252) CHCHD6 (ENSRFEG00010007121) PLXNA1 (ENSRFEG00010007057) ENSRFEG00010007030 TPRA1 (ENSRFEG00010006977) MCM2 (ENSRFEG00010006924) PODXL2 (ENSRFEG00010006876) ENSRFEG00010006843 MGLL (ENSRFEG00010006765) ENSRFEG00010006714 KBTBD12 (ENSRFEG00010006684) SEC61A1 (ENSRFEG00010006596) RUVBL1 (ENSRFEG00010006540) EEFSEC (ENSRFEG00010006458) DNAJB8 (ENSRFEG00010006393) Greater horseshoe bat MODERN SPECIES 14 ENSRFEG00010013876 ENSRFEG00010013856 ENSRFEG00010013832 SPRR4 (ENSRFEG00010013804) ENSRFEG00010013574 LCE7A (ENSRFEG00010013553) KPRP (ENSRFEG00010013203) ENSRFEG00010013183 C1orf68 (ENSRFEG00010013146) CRNN (ENSRFEG00010012881) #16 ENSRFEG00010012690 #17 ENSRFEG00010012520 ENSRFEG00010012460 ##19 ENSRFEG00010012428 #20 ENSRFEG00010012331 #21 ENSRFEG00010012269 #22 ENSRFEG00010012237 ##23 ENSRFEG00010012107 #24 THEM5 (ENSRFEG00010012018) #25 C2CD4D (ENSRFEG00010011998) RORC (ENSRFEG00010011901) #26 LINGO4 (ENSRFEG00010011864) #27 TDRKH (ENSRFEG00010011740) #28 OAZ3 (ENSRFEG00010011457) #29 MRPL9 (ENSRFEG00010011321) #30 RIIAD1 (ENSRFEG00010011257) #31 CELF3 (ENSRFEG00010011151) #32 SNX27 (ENSRFEG00010010910) #33 TUFT1 (ENSRFEG00010010800) #34 ENSRFEG00010010693 #35 POGZ (ENSRFEG00010021734) #36 Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 12 IFRD1 (ENSRFEG00010016752) ZNF277 (ENSRFEG00010017000) DOCK4 (ENSRFEG00010017110) IMMP2L (ENSRFEG00010017377) LRRN3 (ENSRFEG00010017411) ENSRFEG00010017426 DNAJB9 (ENSRFEG00010017550) THAP5 (ENSRFEG00010017602) GPR141 (ENSRFEG00010017711) ELMO1 (ENSRFEG00010017738) ENSRFEG00010017830 AOAH (ENSRFEG00010017873) ANLN (ENSRFEG00010018266) MATCAP2 (ENSRFEG00010018374) EEPD1 (ENSRFEG00010018527) ENSRFEG00010018573 #22 ENSRFEG00010018618 HERPUD2 (ENSRFEG00010018989) TBX20 (ENSRFEG00010019024) DPY19L2 (ENSRFEG00010019107) DPY19L1 (ENSRFEG00010019280) NPSR1 (ENSRFEG00010019394) ENSRFEG00010019601 BMPER (ENSRFEG00010019644) BBS9 (ENSRFEG00010019817) ENSRFEG00010019942 RP9 (ENSRFEG00010019978) NT5C3A (ENSRFEG00010020078) FKBP9 (ENSRFEG00010020183) KBTBD2 (ENSRFEG00010020267) AVL9 (ENSRFEG00010020290) Greater horseshoe bat MODERN SPECIES 22 ENSRFEG00010002000 SUPT20H (ENSRFEG00010002062) EXOSC8 (ENSRFEG00010002172) ALG5 (ENSRFEG00010002210) SMAD9 (ENSRFEG00010002255) RFXAP (ENSRFEG00010002291) SERTM1 (ENSRFEG00010002306) CCNA1 (ENSRFEG00010002318) SPART (ENSRFEG00010002346) CCDC169 (ENSRFEG00010002375) SOHLH2 (ENSRFEG00010002418) DCLK1 (ENSRFEG00010002490) NBEA (ENSRFEG00010002656) MAB21L1 (ENSRFEG00010002773) RFC3 (ENSRFEG00010002784) ENSRFEG00010002807 #22 STARD13 (ENSRFEG00010002835) KL (ENSRFEG00010002905) PDS5B (ENSRFEG00010002968) SGCG (ENSRFEG00010003054) ENSRFEG00010003106 TNFRSF19 (ENSRFEG00010003158) MIPEP (ENSRFEG00010003206) ENSRFEG00010003258 ENSRFEG00010003289 SPATA13 (ENSRFEG00010003339) AMER2 (ENSRFEG00010003380) MTMR6 (ENSRFEG00010003396) NUP58 (ENSRFEG00010003461) ATP8A2 (ENSRFEG00010003553) ENSRFEG00010003604 Equus ANCESTRAL SPECIES 3 ENSGT01090000263307 ENSGT00940000161842.b.m ENSGT00940000161842.b.n.b ENSGT00940000161842.b.n.a.b ENSGT00940000161842.b.n.a.a ENSGT00940000163498 #15 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00390000004322.a.a.f Donkey MODERN SPECIES 17 ENSEASG00005030114 ENSEASG00005038825 ENSEASG00005033840 #15 LCE3B (ENSEASG00005028563) ENSEASG00005025890 ENSEASG00005037661 ENSEASG00005037749 #16 ENSEASG00005029775 #17 ENSEASG00005035420 #19 ENSEASG00005023707 ENSEASG00005032937 ##19 RPTN (ENSEASG00005037477) #19 ENSEASG00005035273 #20 ENSEASG00005031187 #20 TCHHL1 (ENSEASG00005005183) #21 ENSEASG00005005188 #22 ENSEASG00005028682 ##23 ENSEASG00005005198 #24 RORC (ENSEASG00005005204) #26 LINGO4 (ENSEASG00005031153) #27 TDRKH (ENSEASG00005005213) #28 OAZ3 (ENSEASG00005005219) #29 MRPL9 (ENSEASG00005030204) #30 RIIAD1 (ENSEASG00005031539) #31 CELF3 (ENSEASG00005005254) #32 SNX27 (ENSEASG00005005260) #33 TUFT1 (ENSEASG00005005295) #34 ENSEASG00005005590 #35 ENSEASG00005005594 POGZ (ENSEASG00005005607) #36 ENSEASG00005005615 Horse MODERN SPECIES 26 C1orf68 (ENSECAG00000037587) LCE4A (ENSECAG00000042459) ENSECAG00000041350 ENSECAG00000037218 ENSECAG00000050655 ENSECAG00000054891 LCE3B (ENSECAG00000042522) ENSECAG00000041610 ENSECAG00000043314 ENSECAG00000044665 #15 CRNN (ENSECAG00000017658) #16 ENSECAG00000028110 #17 ENSECAG00000058901 ##19 ENSECAG00000037094 #19 TCHHL1 (ENSECAG00000034035) #21 S100A11 (ENSECAG00000019069) #22 S100A10 (ENSECAG00000019382) ##23 THEM4 (ENSECAG00000020127) #24 THEM5 (ENSECAG00000020807) #25 C2CD4D (ENSECAG00000028243) RORC (ENSECAG00000000918) #26 LINGO4 (ENSECAG00000012494) #27 TDRKH (ENSECAG00000013096) #28 OAZ3 (ENSECAG00000015002) #29 MRPL9 (ENSECAG00000016263) #30 CELF3 (ENSECAG00000020365) #32 SNX27 (ENSECAG00000000614) #33 TUFT1 (ENSECAG00000011044) #34 CGN (ENSECAG00000015048) #35 ENSECAG00000039248 POGZ (ENSECAG00000021579) #36 Artiodactyla ANCESTRAL SPECIES ENSGT00730000111580 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 #15 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a.h.a #19 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.h.b #19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Suina ANCESTRAL SPECIES 8 ENSGT00780000122937 ENSGT00940000166289 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.a ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 #15 ENSGT00730000113097 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000162698 #35 Chacoan peccary MODERN SPECIES 29 ENSCWAG00000002911 SMCP (ENSCWAG00000002916) LCE7A (ENSCWAG00000002921) LCE1A (ENSCWAG00000002932) ENSCWAG00000002940 KPRP (ENSCWAG00000002949) C1orf68 (ENSCWAG00000002953) ENSCWAG00000002958 ENSCWAG00000002982 #16 ENSCWAG00000002990 #17 ENSCWAG00000003000 #17 RPTN (ENSCWAG00000003036) #19 ENSCWAG00000003046 #20 TCHHL1 (ENSCWAG00000003058) #21 ENSCWAG00000003065 S100A11 (ENSCWAG00000003075) #22 S100A10 (ENSCWAG00000003083) ##23 THEM5 (ENSCWAG00000003108) #25 C2CD4D (ENSCWAG00000003120) RORC (ENSCWAG00000003140) #26 LINGO4 (ENSCWAG00000005108) #27 TDRKH (ENSCWAG00000005128) #28 OAZ3 (ENSCWAG00000005285) #29 MRPL9 (ENSCWAG00000005339) #30 RIIAD1 (ENSCWAG00000005371) #31 CELF3 (ENSCWAG00000005407) #32 SNX27 (ENSCWAG00000005517) #33 TUFT1 (ENSCWAG00000005625) #34 CGN (ENSCWAG00000005751) POGZ (ENSCWAG00000005868) #36 PSMB4 (ENSCWAG00000006120) Pig MODERN SPECIES 12 C1orf68 (ENSSSCG00000006599) LCE5A (ENSSSCG00000040878) ENSSSCG00000053408 #15 LCE3B (ENSSSCG00000061182) ENSSSCG00000051890 ENSSSCG00000053487 #15 CRCT1 (ENSSSCG00000044768) CRNN (ENSSSCG00000006604) #16 ENSSSCG00000042564 #17 ENSSSCG00000030031 ENSSSCG00000054200 ENSSSCG00000044041 #19 ENSSSCG00000006605 #19 ENSSSCG00000038121 #20 TCHHL1 (ENSSSCG00000006609) #21 S100A11 (ENSSSCG00000006610) #22 S100A10 (ENSSSCG00000006612) ##23 ENSSSCG00000057672 #24 THEM5 (ENSSSCG00000006614) #25 C2CD4D (ENSSSCG00000021540) RORC (ENSSSCG00000026427) #26 LINGO4 (ENSSSCG00000026259) #27 TDRKH (ENSSSCG00000027770) #28 OAZ3 (ENSSSCG00000027091) #29 MRPL9 (ENSSSCG00000028343) #30 RIIAD1 (ENSSSCG00000041677) #31 CELF3 (ENSSSCG00000006618) #32 SNX27 (ENSSSCG00000006619) #33 TUFT1 (ENSSSCG00000006620) #34 ENSSSCG00000006621 #35 POGZ (ENSSSCG00000006622) #36 Artiodactyla_a ANCESTRAL SPECIES ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 #15 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a.h.a #19 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.h.b #19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Camelidae DUPLICATION Camelidae DUPLICATION Camelidae ANCESTRAL SPECIES 6 ENSGT00940000163629 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162657 ENSGT00700000104637 ENSGT00730000111592 ENSGT00730000111626 ENSGT00940000164168 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.h.b #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.x.a #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 Arabian camel MODERN SPECIES 13 ENSCDRG00005016183 ENSCDRG00005016179 ENSCDRG00005016128 ENSCDRG00005016116 ENSCDRG00005016105 C1orf68 (ENSCDRG00005016061) ENSCDRG00005016046 #15 CRNN (ENSCDRG00005015862) #16 ENSCDRG00005015826 #17 ENSCDRG00005015797 #17 ENSCDRG00005015707 ##19 ENSCDRG00005015682 ENSCDRG00005015608 #19 ENSCDRG00005015568 #20 ENSCDRG00005015525 #21 ENSCDRG00005015487 #22 ENSCDRG00005015452 ENSCDRG00005015426 ##23 THEM4 (ENSCDRG00005015376) #24 THEM5 (ENSCDRG00005015330) #25 RORC (ENSCDRG00005015191) #26 LINGO4 (ENSCDRG00005015167) #27 TDRKH (ENSCDRG00005015083) #28 OAZ3 (ENSCDRG00005014745) #29 MRPL9 (ENSCDRG00005014548) #30 ENSCDRG00005014479 #31 CELF3 (ENSCDRG00005014367) #32 SNX27 (ENSCDRG00005014065) #33 TUFT1 (ENSCDRG00005013754) #34 ENSCDRG00005013658 #35 POGZ (ENSCDRG00005011049) #36 Alpaca MODERN SPECIES 5129 S100A11 (ENSVPAG00000007662) #22 Camelidae ANCESTRAL SPECIES ENSGT00940000154172.x.b #22 Arabian camel MODERN SPECIES 34 ZBTB2 (ENSCDRG00005020809) AKAP12 (ENSCDRG00005020815) MTHFD1L (ENSCDRG00005020831) PLEKHG1 (ENSCDRG00005020866) IYD (ENSCDRG00005020897) PPP1R14C (ENSCDRG00005020905) ENSCDRG00005020920 ENSCDRG00005020939 LRP11 (ENSCDRG00005020953) PCMT1 (ENSCDRG00005020971) NUP43 (ENSCDRG00005020981) ENSCDRG00005020991 LATS1 (ENSCDRG00005020994) KATNA1 (ENSCDRG00005021003) GINM1 (ENSCDRG00005021015) ENSCDRG00005021020 #22 PPIL4 (ENSCDRG00005021029) ENSCDRG00005021043 TAB2 (ENSCDRG00005021050) ENSCDRG00005021056 UST (ENSCDRG00005021059) SASH1 (ENSCDRG00005021072) SAMD5 (ENSCDRG00005021089) STXBP5 (ENSCDRG00005006654) ADGB (ENSCDRG00005007210) RAB32 (ENSCDRG00005007512) GRM1 (ENSCDRG00005007541) SHPRH (ENSCDRG00005007963) FBXO30 (ENSCDRG00005008270) EPM2A (ENSCDRG00005008431) ENSCDRG00005008445 Camelidae ANCESTRAL SPECIES ENSGT00940000154172.y #22 Arabian camel MODERN SPECIES 204 ENSCDRG00005021680 ENSCDRG00005021670 EIF2S3B (ENSCDRG00005021667) KLHL15 (ENSCDRG00005021665) ENSCDRG00005021662 ENSCDRG00005021660 SAT1 (ENSCDRG00005021657) ACOT9 (ENSCDRG00005021651) PRDX4 (ENSCDRG00005021642) ENSCDRG00005021636 PTCHD1 (ENSCDRG00005021635) ENSCDRG00005021631 PHEX (ENSCDRG00005021620) SMS (ENSCDRG00005021617) MBTPS2 (ENSCDRG00005021615) ENSCDRG00005021614 #22 SMPX (ENSCDRG00005021613) KLHL34 (ENSCDRG00005021612) CNKSR2 (ENSCDRG00005021599) RPS6KA3 (ENSCDRG00005021577) EIF1AX (ENSCDRG00005021559) MAP7D2 (ENSCDRG00005021545) BCLAF3 (ENSCDRG00005021538) SH3KBP1 (ENSCDRG00005021507) PDHA1 (ENSCDRG00005021482) ADGRG2 (ENSCDRG00005016282) PHKA2 (ENSCDRG00005015770) PPEF1 (ENSCDRG00005015683) RS1 (ENSCDRG00005015612) ENSCDRG00005015576 CDKL5 (ENSCDRG00005015479) Artiodactyla_b ANCESTRAL SPECIES ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 #15 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a.h.a #19 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.h.b #19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Pecora DUPLICATION Pecora ANCESTRAL SPECIES 2 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 #15 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a.h.a #19 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.h.b #19 ENSGT00940000154467.a.i #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.z #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Yarkand deer DUPLICATION Yarkand deer DUPLICATION Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 19 PIAS2 (ENSCHYG00000010761) ENSCHYG00000010966 ST8SIA5 (ENSCHYG00000011028) LOXHD1 (ENSCHYG00000011324) ENSCHYG00000013406 ENSCHYG00000013803 HAUS1 (ENSCHYG00000013860) ATP5F1A (ENSCHYG00000014052) PSTPIP2 (ENSCHYG00000014255) ENSCHYG00000014621 EPG5 (ENSCHYG00000014653) SIGLEC15 (ENSCHYG00000014853) SLC14A1 (ENSCHYG00000014960) SLC14A2 (ENSCHYG00000015148) SETBP1 (ENSCHYG00000015524) ENSCHYG00000015620 #22 ENSCHYG00000015702 ENSCHYG00000015729 MC2R (ENSCHYG00000015770) MC5R (ENSCHYG00000015807) ENSCHYG00000015835 FAM210A (ENSCHYG00000015902) LDLRAD4 (ENSCHYG00000015972) ENSCHYG00000016072 CEP192 (ENSCHYG00000016202) ENSCHYG00000016387 PTPN2 (ENSCHYG00000016527) ENSCHYG00000016788 CEP76 (ENSCHYG00000016908) SPIRE1 (ENSCHYG00000017091) PRELID3A (ENSCHYG00000018436) Yarkand deer MODERN SPECIES 17 PAIP1 (ENSCHYG00000025874) NNT (ENSCHYG00000025841) FGF10 (ENSCHYG00000025812) MRPS30 (ENSCHYG00000025791) HCN1 (ENSCHYG00000025776) ENSCHYG00000025675 ENSCHYG00000025642 PARP8 (ENSCHYG00000024950) ISL1 (ENSCHYG00000024814) PELO (ENSCHYG00000024796) ITGA1 (ENSCHYG00000024630) ITGA2 (ENSCHYG00000024553) MOCS2 (ENSCHYG00000024499) FST (ENSCHYG00000024403) NDUFS4 (ENSCHYG00000024374) ENSCHYG00000024359 #22 ARL15 (ENSCHYG00000024342) HSPB3 (ENSCHYG00000024317) ENSCHYG00000024293 ESM1 (ENSCHYG00000024268) GZMK (ENSCHYG00000024238) ENSCHYG00000024225 ENSCHYG00000024197 GZMA (ENSCHYG00000024172) GPX8 (ENSCHYG00000024127) CDC20B (ENSCHYG00000023941) MCIDAS (ENSCHYG00000023898) CCNO (ENSCHYG00000023862) DHX29 (ENSCHYG00000023078) MTREX (ENSCHYG00000022902) PLPP1 (ENSCHYG00000022811) Yarkand deer MODERN SPECIES 12 ENSCHYG00000019137 ENSCHYG00000019176 ENSCHYG00000019223 KPRP (ENSCHYG00000019359) LCE3B (ENSCHYG00000019507) ENSCHYG00000019532 ENSCHYG00000019568 #15 ENSCHYG00000005111 ENSCHYG00000005119 LCE5A (ENSCHYG00000005138) CRNN (ENSCHYG00000005156) #16 ENSCHYG00000005180 #17 ENSCHYG00000005225 #18 ENSCHYG00000005265 TCHHL1 (ENSCHYG00000005278) #21 ENSCHYG00000005300 #22 S100A10 (ENSCHYG00000005318) ##23 THEM4 (ENSCHYG00000005358) #24 THEM5 (ENSCHYG00000005402) #25 C2CD4D (ENSCHYG00000005436) RORC (ENSCHYG00000005468) #26 LINGO4 (ENSCHYG00000005555) #27 TDRKH (ENSCHYG00000005624) #28 OAZ3 (ENSCHYG00000005747) #29 MRPL9 (ENSCHYG00000005891) #30 RIIAD1 (ENSCHYG00000006033) #31 CELF3 (ENSCHYG00000006085) #32 SNX27 (ENSCHYG00000006199) #33 TUFT1 (ENSCHYG00000006362) #34 ENSCHYG00000006682 #35 POGZ (ENSCHYG00000006826) #36 Yarkand deer MODERN SPECIES 16 CMTM7 (ENSCHYG00000027004) CMTM6 (ENSCHYG00000027000) ENSCHYG00000026992 CNOT10 (ENSCHYG00000026965) TRIM71 (ENSCHYG00000026957) CCR4 (ENSCHYG00000026954) ENSCHYG00000026943 CRTAP (ENSCHYG00000026926) SUSD5 (ENSCHYG00000026913) FBXL2 (ENSCHYG00000026868) UBP1 (ENSCHYG00000026826) ENSCHYG00000026804 CLASP2 (ENSCHYG00000024648) ENSCHYG00000024143 ENSCHYG00000024082 ENSCHYG00000024073 #22 ARPP21 (ENSCHYG00000023809) STAC (ENSCHYG00000023619) ENSCHYG00000023050 MLH1 (ENSCHYG00000022653) EPM2AIP1 (ENSCHYG00000022605) TRANK1 (ENSCHYG00000022098) DCLK3 (ENSCHYG00000021985) GOLGA4 (ENSCHYG00000020281) ENSCHYG00000020164 ITGA9 (ENSCHYG00000019698) CTDSPL (ENSCHYG00000019163) VILL (ENSCHYG00000018981) PLCD1 (ENSCHYG00000018682) DLEC1 (ENSCHYG00000018131) ACAA1 (ENSCHYG00000017187) Percora_a ANCESTRAL SPECIES 1 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 #15 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.a.h.b #19 ENSGT00940000154467.a.h.a #19 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i.a.a #19 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a.i.b #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.z #22 ENSGT00940000154197.a.a #23 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000182891.a.a.b.a.a.a.b.a.b ENSGT00950000183065.B #34 Siberian musk deer MODERN SPECIES 247 ENSMMSG00000016213 ##19 ENSMMSG00000016239 #19 ENSMMSG00000016303 #20 TCHHL1 (ENSMMSG00000016323) #21 S100A11 (ENSMMSG00000016349) #22 ENSMMSG00000016372 #23 THEM4 (ENSMMSG00000016402) #24 THEM5 (ENSMMSG00000016442) #25 C2CD4D (ENSMMSG00000016475) RORC (ENSMMSG00000016501) #26 LINGO4 (ENSMMSG00000016563) #27 TDRKH (ENSMMSG00000016586) #28 OAZ3 (ENSMMSG00000016664) #29 MRPL9 (ENSMMSG00000016852) #30 RIIAD1 (ENSMMSG00000016900) #31 CELF3 (ENSMMSG00000016967) #32 SNX27 (ENSMMSG00000017082) #33 ENSMMSG00000017218 TUFT1 (ENSMMSG00000017243) #34 ENSMMSG00000017355 #35 Bovidae ANCESTRAL SPECIES 1 ENSGT00950000183312 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a.h.a.a #19 ENSGT00940000154467.a.h.a.b #19 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.h.b #19 ENSGT00940000154467.a.i.b #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.z #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00950000186450 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000182891.a.a.b.a.a.a.b.a.b ENSGT00950000183065.B #34 Bovinae ANCESTRAL SPECIES 1 ENSGT00440000039991 ENSGT00950000183312 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a.h.a.a #19 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.h.b #19 ENSGT00940000154467.a.i.b #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.z #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00950000186450 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000182891.a.a.b.a.a.a.b.a.b ENSGT00950000183065.B #34 Bos ANCESTRAL SPECIES ENSGT00950000183312 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163498 #15 ENSGT00970000197102 ENSGT01050000245143 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a.h.a.a #19 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.h.b #19 ENSGT00940000154467.a.i.b #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.z #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00950000186450 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000182891.a.a.b.a.a.a.b.a.b ENSGT00950000183065.B #34 Bos_b ANCESTRAL SPECIES 1 ENSGT00950000183312 ENSGT00730000111580 ENSGT00940000165404 ENSGT00940000163905 ENSGT00970000197102 ENSGT01050000245143 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.a.h.a.b #19 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.i.a.a #19 ENSGT00940000154467.a.h.b #19 ENSGT00940000154467.a.i.b #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.z #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00950000186450 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000182891.a.a.b.a.a.a.b.a.b ENSGT00950000183065.B #34 Hybrid Bos Indicus MODERN SPECIES 22 ENSBIXG00005008014 LCE1A (ENSBIXG00005007992) C1orf68 (ENSBIXG00005007957) LCE3B (ENSBIXG00005000042) ENSBIXG00005007950 ENSBIXG00005007945 ENSBIXG00005007940 ENSBIXG00005007930 #16 ENSBIXG00005005284 #17 ENSBIXG00005029242 #17 ENSBIXG00005001535 ##19 ENSBIXG00005001542 #19 ENSBIXG00005001545 #19 ENSBIXG00005001555 #20 TCHHL1 (ENSBIXG00005001560) #21 ENSBIXG00005005274 #22 S100A10 (ENSBIXG00005029229) ##23 THEM4 (ENSBIXG00005005256) #24 ENSBIXG00005001633 THEM5 (ENSBIXG00005029208) #25 C2CD4D (ENSBIXG00005001695) RORC (ENSBIXG00005001718) #26 LINGO4 (ENSBIXG00005001805) #27 TDRKH (ENSBIXG00005029148) #28 ENSBIXG00005005150 OAZ3 (ENSBIXG00005001942) #29 MRPL9 (ENSBIXG00005005138) #30 RIIAD1 (ENSBIXG00005001997) #31 CELF3 (ENSBIXG00005005120) #32 SNX27 (ENSBIXG00005005088) #33 ENSBIXG00005005039 Cow MODERN SPECIES 22 ENSBTAG00000052594 ENSBTAG00000053743 ENSBTAG00000054620 C3H1orf68 (ENSBTAG00000046138) ENSBTAG00000050431 CRCT1 (ENSBTAG00000008700) ENSBTAG00000032446 CRNN (ENSBTAG00000054069) #16 ENSBTAG00000054258 #17 ENSBTAG00000054333 #19 ENSBTAG00000048997 ##19 ENSBTAG00000039357 #19 RPTN (ENSBTAG00000039260) #19 TCHH (ENSBTAG00000053103) TCHHL1 (ENSBTAG00000015854) #21 S100A11 (ENSBTAG00000015145) #22 S100A10 (ENSBTAG00000015147) ##23 THEM4 (ENSBTAG00000004772) #24 ENSBTAG00000051270 THEM5 (ENSBTAG00000000690) #25 C2CD4D (ENSBTAG00000047528) RORC (ENSBTAG00000017405) #26 LINGO4 (ENSBTAG00000040596) #27 TDRKH (ENSBTAG00000021594) #28 ENSBTAG00000050352 OAZ3 (ENSBTAG00000021591) #29 MRPL9 (ENSBTAG00000000797) #30 CELF3 (ENSBTAG00000019131) #32 SNX27 (ENSBTAG00000001942) #33 ENSBTAG00000054946 TUFT1 (ENSBTAG00000017566) #34 Bos_a ANCESTRAL SPECIES 47 ENSGT00950000183312 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163498 #15 ENSGT00970000197102 ENSGT01050000245143 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a.h.a.a #19 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a.h.b #19 ENSGT00940000154467.a.i.b #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.z #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00950000186450 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000162698 #35 Domestic yak MODERN SPECIES 22 ENSBGRG00000003211 KPRP (ENSBGRG00000003208) C1orf68 (ENSBGRG00000003205) ENSBGRG00000003177 #15 ENSBGRG00000003168 ENSBGRG00000003159 ENSBGRG00000003154 #16 ENSBGRG00000003149 #17 ENSBGRG00000003128 #19 ENSBGRG00000003103 ##19 ENSBGRG00000003087 #19 ENSBGRG00000003077 #19 ENSBGRG00000003029 #20 ENSBGRG00000003014 #21 ENSBGRG00000002999 ENSBGRG00000002990 #22 S100A10 (ENSBGRG00000002962) ##23 ENSBGRG00000002950 THEM4 (ENSBGRG00000002939) #24 THEM5 (ENSBGRG00000002906) #25 RORC (ENSBGRG00000002783) #26 TDRKH (ENSBGRG00000002702) #28 ENSBGRG00000002678 ENSBGRG00000002657 #29 ENSBGRG00000002612 #27 RIIAD1 (ENSBGRG00000002574) #31 CELF3 (ENSBGRG00000002490) #32 SNX27 (ENSBGRG00000002390) #33 ENSBGRG00000002366 ENSBGRG00000002354 TUFT1 (ENSBGRG00000002325) #34 Wild yak MODERN SPECIES 688 ENSBMUG00000024950 ENSBMUG00000024947 C1orf68 (ENSBMUG00000024927) LCE3B (ENSBMUG00000024922) ENSBMUG00000024916 ENSBMUG00000024912 ENSBMUG00000024905 #16 ENSBMUG00000024887 #17 ENSBMUG00000024880 #18 ENSBMUG00000024877 #19 ENSBMUG00000024872 ##19 ENSBMUG00000024867 #19 RPTN (ENSBMUG00000024866) #19 ENSBMUG00000024861 #20 TCHHL1 (ENSBMUG00000024857) #21 ENSBMUG00000024843 #22 S100A10 (ENSBMUG00000024837) ##23 THEM4 (ENSBMUG00000024826) #24 THEM5 (ENSBMUG00000024818) #25 RORC (ENSBMUG00000024807) #26 LINGO4 (ENSBMUG00000024776) #27 TDRKH (ENSBMUG00000024766) #28 ENSBMUG00000024752 OAZ3 (ENSBMUG00000024748) #29 MRPL9 (ENSBMUG00000024735) #30 RIIAD1 (ENSBMUG00000024721) #31 CELF3 (ENSBMUG00000024707) #32 SNX27 (ENSBMUG00000024681) #33 TUFT1 (ENSBMUG00000024610) #34 CGN (ENSBMUG00000024577) POGZ (ENSBMUG00000024528) #36 American bison MODERN SPECIES 3295 ENSBBBG00000003064 ENSBBBG00000003062 ENSBBBG00000009107 SPRR4 (ENSBBBG00000013960) ENSBBBG00000003052 ENSBBBG00000013950 KPRP (ENSBBBG00000013941) C1orf68 (ENSBBBG00000013938) LCE3B (ENSBBBG00000003036) ENSBBBG00000013936 ENSBBBG00000013932 #16 ENSBBBG00000003027 #17 ENSBBBG00000002896 #19 ENSBBBG00000013898 #20 TCHHL1 (ENSBBBG00000013893) #21 ENSBBBG00000013884 #22 S100A10 (ENSBBBG00000013878) ##23 THEM4 (ENSBBBG00000002992) #24 THEM5 (ENSBBBG00000002989) #25 RORC (ENSBBBG00000013856) #26 LINGO4 (ENSBBBG00000002969) #27 TDRKH (ENSBBBG00000013832) #28 ENSBBBG00000013787 OAZ3 (ENSBBBG00000013776) #29 MRPL9 (ENSBBBG00000002933) #30 RIIAD1 (ENSBBBG00000013726) #31 CELF3 (ENSBBBG00000002911) #32 SNX27 (ENSBBBG00000013687) #33 ENSBBBG00000013643 TUFT1 (ENSBBBG00000013630) #34 ENSBBBG00000013560 Caprinae ANCESTRAL SPECIES 2 ENSGT01040000241138 ENSGT00780000122937 ENSGT00940000166289 ENSGT00950000183312 ENSGT00730000111580 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 #15 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.a.h.b #19 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a.i.b #19 ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172.z #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00950000186450 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 Goat MODERN SPECIES 22 LELP1 (ENSCHIG00000001135) ENSCHIG00000013514 SPRR4 (ENSCHIG00000013052) ENSCHIG00000024891 ENSCHIG00000007657 ENSCHIG00000017937 KPRP (ENSCHIG00000023870) C1orf68 (ENSCHIG00000011620) LCE3B (ENSCHIG00000012019) CRNN (ENSCHIG00000025673) #16 ENSCHIG00000020535 #17 ENSCHIG00000026233 #19 ENSCHIG00000018492 #19 ENSCHIG00000005102 TCHHL1 (ENSCHIG00000010186) #21 S100A11 (ENSCHIG00000009234) #22 S100A10 (ENSCHIG00000017889) ##23 ENSCHIG00000024791 ENSCHIG00000023394 THEM4 (ENSCHIG00000015398) #24 THEM5 (ENSCHIG00000021133) #25 C2CD4D (ENSCHIG00000010717) RORC (ENSCHIG00000005408) #26 LINGO4 (ENSCHIG00000010031) #27 TDRKH (ENSCHIG00000025326) #28 ENSCHIG00000018414 OAZ3 (ENSCHIG00000024499) #29 MRPL9 (ENSCHIG00000011797) #30 RIIAD1 (ENSCHIG00000025840) #31 CELF3 (ENSCHIG00000025847) #32 ENSCHIG00000012675 Rambouillet Sheep MODERN SPECIES ENSOARG00020000270 LCE1A (ENSOARG00020000260) ENSOARG00020000228 C1orf68 (ENSOARG00020000210) LCE3B (ENSOARG00020000187) ENSOARG00020000176 ENSOARG00020000162 #15 ENSOARG00020000140 #19 ENSOARG00020000109 #19 ENSOARG00020000102 #19 ENSOARG00020018940 ##19 ENSOARG00020018927 #18 ENSOARG00020018856 #19 ENSOARG00020018824 TCHHL1 (ENSOARG00020018793) #21 S100A11 (ENSOARG00020018738) #22 S100A10 (ENSOARG00020018696) ##23 THEM4 (ENSOARG00020018617) #24 THEM5 (ENSOARG00020018565) #25 C2CD4D (ENSOARG00020018535) RORC (ENSOARG00020018249) #26 LINGO4 (ENSOARG00020018213) #27 TDRKH (ENSOARG00020018147) #28 OAZ3 (ENSOARG00020018023) #29 MRPL9 (ENSOARG00020017917) #30 RIIAD1 (ENSOARG00020017857) #31 CELF3 (ENSOARG00020017622) #32 SNX27 (ENSOARG00020016963) #33 TUFT1 (ENSOARG00020016156) #34 ENSOARG00020016001 #35 POGZ (ENSOARG00020015459) #36 Pecora ANCESTRAL SPECIES 36 ENSGT01030000234527.A.a.b.a.a ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b ENSGT00950000182864.a.b.a ENSGT00950000182859.A.a.a.b ENSGT00940000154352.A ENSGT00940000154314 ENSGT00390000008225 ENSGT00940000157734 ENSGT00990000214190 ENSGT00940000156208 ENSGT00940000154418.a.b ENSGT00940000161406 ENSGT00900000141143 ENSGT00940000156716 ENSGT00940000154172.`b #22 ENSGT00390000005989.b ENSGT00940000162737 ENSGT00940000160930 ENSGT00940000158607 ENSGT01100000263540.B.d ENSGT00940000155874 ENSGT00530000063711.a ENSGT00720000108860 ENSGT00940000158918.j ENSGT00940000162387 ENSGT00940000160355 ENSGT00950000182882.B ENSGT00530000063672.b ENSGT00390000000531 ENSGT00940000160418 Percora_a ANCESTRAL SPECIES 24 ENSGT01030000234527.A.a.b.a.a ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b ENSGT00950000182864.a.b.a ENSGT00950000182859.A.a.a.b ENSGT00940000154352.A ENSGT00940000154314 ENSGT00390000008225 ENSGT00940000157734 ENSGT00990000214190 ENSGT00940000156208 ENSGT00940000154418.a.b ENSGT00940000161406 ENSGT00900000141143 ENSGT00940000156716 ENSGT00940000154172.`b #22 ENSGT00390000005989.b ENSGT00940000162737 ENSGT00940000160930 ENSGT00940000158607 ENSGT01100000263540.B.d ENSGT00940000155874 ENSGT00530000063711.a ENSGT00720000108860 ENSGT00940000162635.mb.b ENSGT00940000158918.j ENSGT00940000162387 ENSGT00940000160355 ENSGT00950000182882.B ENSGT00530000063672.b ENSGT00390000000531 Bovidae ANCESTRAL SPECIES 14 ENSGT01030000234527.A.a.b.a.a ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b ENSGT00950000182864.a.b.a ENSGT00950000182859.A.a.a.b ENSGT00940000154352.A ENSGT00940000154314 ENSGT00390000008225 ENSGT00940000157734 ENSGT00990000214190 ENSGT00940000156208 ENSGT00940000154418.a.b ENSGT00940000161406 ENSGT00900000141143 ENSGT00940000156716 ENSGT00940000154172.`b #22 ENSGT00390000005989.b ENSGT00940000162737 ENSGT00940000160930 ENSGT00940000158607 ENSGT01100000263540.B.d ENSGT00940000155874 ENSGT00530000063711.a ENSGT00720000108860 ENSGT00940000162635.mb.b ENSGT00940000158918.j ENSGT00940000162387 ENSGT00940000160355 ENSGT00950000182882.B ENSGT00530000063672.b ENSGT00390000000531 Bovinae ANCESTRAL SPECIES 14 ENSGT01030000234527.A.a.b.a.a ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b ENSGT00950000182864.a.b.a ENSGT00950000182859.A.a.a.b ENSGT00940000154352.A ENSGT00940000154314 ENSGT00390000008225 ENSGT00940000157734 ENSGT00990000214190 ENSGT00940000156208 ENSGT00940000154418.a.b ENSGT00940000161406 ENSGT00900000141143 ENSGT00940000156716 ENSGT00940000154172.`b #22 ENSGT00390000005989.b ENSGT00940000162737 ENSGT00940000160930 ENSGT00940000158607 ENSGT01100000263540.B.d ENSGT00940000155874 ENSGT00530000063711.a ENSGT00720000108860 ENSGT00940000162635.mb.b ENSGT00940000158918.j ENSGT00940000162387 ENSGT00940000160355 ENSGT00950000182882.B ENSGT00530000063672.b ENSGT00390000000531 Bos ANCESTRAL SPECIES 10 ENSGT01030000234527.A.a.b.a.a ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b ENSGT00950000182864.a.b.a ENSGT00950000182859.A.a.a.b ENSGT00940000154352.A ENSGT00940000154314 ENSGT00390000008225 ENSGT00940000157734 ENSGT00990000214190 ENSGT00940000156208 ENSGT00940000154418.a.b ENSGT00940000161406 ENSGT00900000141143 ENSGT00940000156716 ENSGT00940000154172.`b #22 ENSGT00390000005989.b ENSGT00940000162737 ENSGT00940000160930 ENSGT00940000158607 ENSGT01100000263540.B.d ENSGT00940000155874 ENSGT00530000063711.a ENSGT00720000108860 ENSGT00940000162635.mb.b.a ENSGT00940000158918.i.b ENSGT00940000158918.j ENSGT00940000162387 ENSGT00940000160355 ENSGT00950000182882.B ENSGT00530000063672.b Bos_b ANCESTRAL SPECIES 3 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b ENSGT00950000182864.a.b.a ENSGT00950000182859.A.a.a.b ENSGT00940000154352.A ENSGT00940000154314 ENSGT00390000008225 ENSGT00940000157734 ENSGT00940000156208 ENSGT00940000161685.A.a ENSGT00940000154418.a.b ENSGT00940000161406 ENSGT00900000141143 ENSGT00940000156716 ENSGT00950000183031.B.e.b.a.a.a ENSGT00940000154172.`b #22 ENSGT00390000005989.b ENSGT00940000162737 ENSGT00940000160930 ENSGT00940000158607 ENSGT01100000263540.B.d ENSGT00940000155874 ENSGT00530000063711.a ENSGT00720000108860 ENSGT00940000158918.j ENSGT00940000162387 ENSGT00940000160355 ENSGT00950000182882.B ENSGT00530000063672.b ENSGT00390000000531 ENSGT00940000160418 Cow MODERN SPECIES 27 DPYSL2 (ENSBTAG00000018373) PNMA2 (ENSBTAG00000037986) BNIP3L (ENSBTAG00000021307) PPP2R2A (ENSBTAG00000018317) EBF2 (ENSBTAG00000040390) CDCA2 (ENSBTAG00000002756) KCTD9 (ENSBTAG00000012382) GNRH1 (ENSBTAG00000000164) DOCK5 (ENSBTAG00000015513) NEFL (ENSBTAG00000021949) NEFM (ENSBTAG00000039530) ADAM7 (ENSBTAG00000039171) ADAMDEC1 (ENSBTAG00000001125) ADAM28 (ENSBTAG00000037929) ENSBTAG00000038064 ENSBTAG00000048755 #22 STC1 (ENSBTAG00000001687) ENSBTAG00000051369 NKX2-6 (ENSBTAG00000014008) NKX3-1 (ENSBTAG00000001221) SLC25A37 (ENSBTAG00000019099) ENTPD4 (ENSBTAG00000006768) LOXL2 (ENSBTAG00000006214) R3HCC1 (ENSBTAG00000025830) CHMP7 (ENSBTAG00000013528) RHOBTB2 (ENSBTAG00000035958) ENSBTAG00000050001 PEBP4 (ENSBTAG00000015416) EGR3 (ENSBTAG00000019293) BIN3 (ENSBTAG00000005470) CCAR2 (ENSBTAG00000005469) Hybrid Bos Indicus MODERN SPECIES 27 ADRA1A (ENSBIXG00005023744) DPYSL2 (ENSBIXG00005004091) PNMA2 (ENSBIXG00005023950) ENSBIXG00005023958 PPP2R2A (ENSBIXG00005024066) EBF2 (ENSBIXG00005024188) CDCA2 (ENSBIXG00005024231) KCTD9 (ENSBIXG00005004143) GNRH1 (ENSBIXG00005024264) DOCK5 (ENSBIXG00005024516) NEFL (ENSBIXG00005024596) NEFM (ENSBIXG00005002572) ADAM7 (ENSBIXG00005024699) ENSBIXG00005025151 ENSBIXG00005025234 ENSBIXG00005004295 #22 STC1 (ENSBIXG00005025303) NKX2-6 (ENSBIXG00005025314) NKX3-1 (ENSBIXG00005025337) SLC25A37 (ENSBIXG00005025367) LOXL2 (ENSBIXG00005025479) R3HCC1 (ENSBIXG00005025548) CHMP7 (ENSBIXG00005025583) ENSBIXG00005025600 ENSBIXG00005025709 RHOBTB2 (ENSBIXG00005026098) ENSBIXG00005026205 EGR3 (ENSBIXG00005026284) BIN3 (ENSBIXG00005026346) CCAR2 (ENSBIXG00005026417) C8orf58 (ENSBIXG00005026447) Bos_a ANCESTRAL SPECIES 20 ENSGT01030000234527.A.a.b.a.a ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b ENSGT00950000182864.a.b.a ENSGT00950000182859.A.a.a.b ENSGT00940000154352.A ENSGT00940000154314 ENSGT00390000008225 ENSGT00940000157734 ENSGT00990000214190 ENSGT00940000156208 ENSGT00940000154418.a.b ENSGT00940000161406 ENSGT00900000141143 ENSGT00940000156716 ENSGT00940000154172.`b #22 ENSGT00390000005989.b ENSGT00940000162737 ENSGT00940000160930 ENSGT00940000158607 ENSGT01100000263540.B.d ENSGT00940000155874 ENSGT00530000063711.a ENSGT00720000108860 ENSGT00940000162635.mb.b.a ENSGT00940000158918.i.b ENSGT00940000162387 ENSGT00940000160355 ENSGT00950000182882.B ENSGT00530000063672.b ENSGT00390000000531 Wild yak MODERN SPECIES 1056 ADAM7 (ENSBMUG00000005939) ADAMDEC1 (ENSBMUG00000006004) ADAM28 (ENSBMUG00000006021) ENSBMUG00000006030 #22 STC1 (ENSBMUG00000006043) NKX2-6 (ENSBMUG00000006056) NKX3-1 (ENSBMUG00000006065) SLC25A37 (ENSBMUG00000006085) Domestic yak MODERN SPECIES 26 PNMA2 (ENSBGRG00000000490) ENSBGRG00000000482 ENSBGRG00000000444 PPP2R2A (ENSBGRG00000000395) EBF2 (ENSBGRG00000017109) CDCA2 (ENSBGRG00000016906) KCTD9 (ENSBGRG00000016782) GNRH1 (ENSBGRG00000016731) DOCK5 (ENSBGRG00000015972) ENSBGRG00000015920 NEFL (ENSBGRG00000015850) NEFM (ENSBGRG00000015744) ENSBGRG00000015724 ADAM7 (ENSBGRG00000014923) ENSBGRG00000014430 ENSBGRG00000014380 #22 STC1 (ENSBGRG00000014320) NKX2-6 (ENSBGRG00000014251) NKX3-1 (ENSBGRG00000014189) SLC25A37 (ENSBGRG00000014111) ENTPD4 (ENSBGRG00000013839) LOXL2 (ENSBGRG00000013709) R3HCC1 (ENSBGRG00000013568) CHMP7 (ENSBGRG00000013440) ENSBGRG00000013324 ENSBGRG00000013289 PEBP4 (ENSBGRG00000013188) EGR3 (ENSBGRG00000013085) BIN3 (ENSBGRG00000012804) CCAR2 (ENSBGRG00000012594) C8orf58 (ENSBGRG00000012373) American bison MODERN SPECIES 3177 ENSBBBG00000025051 ADAM7 (ENSBBBG00000007763) ADAMDEC1 (ENSBBBG00000007853) ADAM28 (ENSBBBG00000006709) ENSBBBG00000025331 #22 STC1 (ENSBBBG00000025351) ENSBBBG00000025361 SLC25A37 (ENSBBBG00000025366) ENTPD4 (ENSBBBG00000025429) LOXL2 (ENSBBBG00000025500) R3HCC1 (ENSBBBG00000010600) CHMP7 (ENSBBBG00000010611) ENSBBBG00000010613 Yarkand deer MODERN SPECIES 7 STMN4 (ENSCHYG00000005084) ADRA1A (ENSCHYG00000004551) DPYSL2 (ENSCHYG00000026867) ENSCHYG00000026854 ENSCHYG00000026841 EBF2 (ENSCHYG00000026813) CDCA2 (ENSCHYG00000026788) KCTD9 (ENSCHYG00000026770) GNRH1 (ENSCHYG00000026755) DOCK5 (ENSCHYG00000026683) NEFL (ENSCHYG00000026647) NEFM (ENSCHYG00000026636) ADAM7 (ENSCHYG00000026508) ADAMDEC1 (ENSCHYG00000026439) ADAM28 (ENSCHYG00000025837) ENSCHYG00000025762 #22 STC1 (ENSCHYG00000025743) NKX2-6 (ENSCHYG00000025734) NKX3-1 (ENSCHYG00000025709) SLC25A37 (ENSCHYG00000025677) ENTPD4 (ENSCHYG00000025626) LOXL2 (ENSCHYG00000025533) R3HCC1 (ENSCHYG00000025446) CHMP7 (ENSCHYG00000025352) ENSCHYG00000025211 RHOBTB2 (ENSCHYG00000025115) PEBP4 (ENSCHYG00000025076) EGR3 (ENSCHYG00000025046) BIN3 (ENSCHYG00000024970) CCAR2 (ENSCHYG00000024837) C8orf58 (ENSCHYG00000024797) Cetacea DUPLICATION Cetacea DUPLICATION Cetacea DUPLICATION Cetacea ANCESTRAL SPECIES 6 ENSGT00940000161684.b.a.b.f ENSGT00940000164210 ENSGT00940000154693.b.b.a ENSGT00940000163677.a.a.d.a.b.b.b ENSGT00940000156866.eb ENSGT00940000154734.B.c.b ENSGT00940000154693.b.a.a.a.b ENSGT00940000161684.b.a.a.a.c.a.a ENSGT00940000161684.b.a.a.a.c.b.b ENSGT00940000163453.a.n.a ENSGT01050000246114 ENSGT00390000018040 ENSGT00940000161820 ENSGT00940000153104.e.a.a.a.a.a ENSGT00940000163034 ENSGT00940000154172.ab.a.a #22 ENSGT00940000162872 ENSGT00940000162111 ENSGT00940000164425 ENSGT00940000162352 ENSGT00940000163014 ENSGT01100000263562.b.a.a.c.a ENSGT00390000010806 ENSGT00940000163974 ENSGT00940000163291 ENSGT00940000163677.a.a.d.a.a.b ENSGT00940000163387 ENSGT00940000164133 ENSGT00940000162092 ENSGT00940000157947 ENSGT00940000160859 Odontoceti ANCESTRAL SPECIES 25 ENSGT00940000161684.b.a.b.f ENSGT00940000164210 ENSGT00940000154734.B.c.b ENSGT00940000154693.b.a.a.a.b ENSGT00940000161684.b.a.a.a.c.a.a ENSGT00940000161684.b.a.a.a.c.b.b ENSGT00940000161335.a.b.a.b.b ENSGT01050000246114 ENSGT00390000018040 ENSGT00940000161820 ENSGT00940000153104.e.a.a.a.a.a ENSGT00940000163034 ENSGT00940000154172.ab.a.a #22 ENSGT00940000162872 ENSGT00940000162111 ENSGT00940000164425 ENSGT00940000162352 ENSGT01100000263562.b.a.a.c.a ENSGT00390000010806 ENSGT00940000163974 ENSGT00940000163291 ENSGT00940000163677.a.a.d.a.a.b ENSGT00940000163387 ENSGT00940000164133 ENSGT00940000162092 ENSGT00940000157947 ENSGT00940000160859 ENSGT00940000160527 Odontoceti_a ANCESTRAL SPECIES 29 ENSGT00940000154693.b.a.a.b ENSGT00940000161684.b.a.b.e ENSGT00940000161684.b.a.b.f ENSGT00940000164210 ENSGT00940000156866.eb ENSGT00940000154734.B.c.b ENSGT00940000154693.b.a.a.a.b ENSGT00940000161684.b.a.a.a.c.a.a ENSGT00940000161684.b.a.a.a.c.b.b ENSGT00940000161335.a.b.a.b.b ENSGT01050000246114 ENSGT00390000018040 ENSGT00940000161820 ENSGT00940000153104.e.a.a.a.a.a ENSGT00940000163034 ENSGT00940000154172.ab.a.a #22 ENSGT00940000162872 ENSGT00940000162111 ENSGT00940000164425 ENSGT00940000162352 ENSGT01100000263562.b.a.a.c.a ENSGT00390000010806 ENSGT00940000163974 ENSGT00940000163291 ENSGT00940000163677.a.a.d.a.a.b ENSGT00940000163387 ENSGT00940000164133 ENSGT00940000162092 ENSGT00940000157947 ENSGT00940000160859 ENSGT00940000160527 Odontoceti_b ANCESTRAL SPECIES 5 ENSGT00940000154693.b.b.a ENSGT00940000156866.eb ENSGT00940000154734.B.c.b ENSGT00940000154693.b.a.a.a.b ENSGT00940000161684.b.a.a.a.c.a.a ENSGT00940000161335.a.b.a.b.a ENSGT01100000263552.g.a.a.b ENSGT00390000013224.j ENSGT00940000161684.b.a.a.a.c.b.b ENSGT00940000161335.a.b.a.b.b ENSGT00940000164345.a ENSGT01050000246114 ENSGT00390000018040 ENSGT00940000161820 ENSGT00940000153104.e.a.a.a.a.a ENSGT00940000154172.ab.a.a #22 ENSGT00940000162872 ENSGT00940000162111 ENSGT00940000164425 ENSGT00940000158890.p.b ENSGT00940000162352 ENSGT00390000010806 ENSGT00940000163974 ENSGT00940000163291 ENSGT00940000163677.a.a.d.a.a.b ENSGT00940000163387 ENSGT00940000154693.a ENSGT00940000164133 ENSGT00940000162092 ENSGT00940000157947 ENSGT00940000160859 Monodontidae ANCESTRAL SPECIES 3 ENSGT00940000156866.eb ENSGT00940000154734.B.c.b ENSGT00940000154693.b.a.a.a.b ENSGT00940000161684.b.a.a.a.c.a.a ENSGT00940000161335.a.b.a.b.a ENSGT01100000263552.g.a.a.b ENSGT00390000013224.j ENSGT00940000161684.b.a.a.a.c.b.b ENSGT00940000161335.a.b.a.b.b ENSGT00940000164345.a ENSGT01050000246114 ENSGT00390000018040 ENSGT00940000161820 ENSGT01010000222906.b.b.a ENSGT00940000153104.e.a.a.a.a.a ENSGT00940000154172.ab.a.a #22 ENSGT00940000162872 ENSGT00940000162111 ENSGT00940000164425 ENSGT00940000158890.p.b ENSGT00940000162352 ENSGT00390000010806 ENSGT00940000163974 ENSGT00940000163291 ENSGT00940000163677.a.a.d.a.a.b ENSGT00940000163387 ENSGT00940000154693.a ENSGT00940000164133 ENSGT00940000162092 ENSGT00940000157947 ENSGT00940000160859 Beluga whale MODERN SPECIES 14 ENSDLEG00000000803 ENSDLEG00000000797 ENSDLEG00000000786 ENSDLEG00000000597 ENSDLEG00000000433 ENSDLEG00000000282 ENSDLEG00000000269 ENSDLEG00000000248 ENSDLEG00000000234 ENSDLEG00000000213 C19orf18 (ENSDLEG00000000196) ZNF606 (ENSDLEG00000000187) ENSDLEG00000000162 ENSDLEG00000000147 ENSDLEG00000000112 ENSDLEG00000002310 #22 ZNF329 (ENSDLEG00000002302) ZNF274 (ENSDLEG00000002286) ZNF544 (ENSDLEG00000002270) ENSDLEG00000002264 ZNF8 (ENSDLEG00000002255) RPS5 (ENSDLEG00000002241) RNF225 (ENSDLEG00000002235) ZNF584 (ENSDLEG00000002226) ENSDLEG00000002222 ZNF132 (ENSDLEG00000002211) ENSDLEG00000002197 ENSDLEG00000002175 ENSDLEG00000002167 ZNF446 (ENSDLEG00000002155) SLC27A5 (ENSDLEG00000002134) Narwhal MODERN SPECIES 296 ENSMMNG00015001077 ENSMMNG00015001116 ENSMMNG00015001140 ENSMMNG00015001147 ENSMMNG00015001172 ENSMMNG00015001243 ENSMMNG00015001310 ENSMMNG00015001333 ENSMMNG00015001353 ENSMMNG00015001379 ENSMMNG00015001389 C19orf18 (ENSMMNG00015001409) ZNF606 (ENSMMNG00015001430) ENSMMNG00015001456 ZNF135 (ENSMMNG00015001472) ENSMMNG00015001493 #22 ZNF274 (ENSMMNG00015001507) ZNF544 (ENSMMNG00015001547) ENSMMNG00015001566 ZNF8 (ENSMMNG00015001581) RPS5 (ENSMMNG00015001631) RNF225 (ENSMMNG00015001671) ZNF584 (ENSMMNG00015001677) ZNF132 (ENSMMNG00015001683) ENSMMNG00015001692 ENSMMNG00015001775 ZNF446 (ENSMMNG00015001802) SLC27A5 (ENSMMNG00015001815) ZBTB45 (ENSMMNG00015001848) TRIM28 (ENSMMNG00015001879) CHMP2A (ENSMMNG00015001934) Blue whale MODERN SPECIES 10 ENSBMSG00010016784 ENSBMSG00010016705 ZNF776 (ENSBMSG00010016668) ENSBMSG00010016648 ENSBMSG00010015222 ENSBMSG00010015040 ENSBMSG00010015012 ENSBMSG00010014994 C19orf18 (ENSBMSG00010014954) ZNF606 (ENSBMSG00010014926) ENSBMSG00010014904 ENSBMSG00010014890 ENSBMSG00010014873 ENSBMSG00010014856 ZNF135 (ENSBMSG00010014831) ENSBMSG00010014820 #22 ZNF329 (ENSBMSG00010014800) ZNF274 (ENSBMSG00010014632) ZNF544 (ENSBMSG00010014554) ZNF8 (ENSBMSG00010014519) ZSCAN22 (ENSBMSG00010014486) ENSBMSG00010014428 ENSBMSG00010014335 RPS5 (ENSBMSG00010014164) RNF225 (ENSBMSG00010014120) ENSBMSG00010014078 ZNF132 (ENSBMSG00010014048) ENSBMSG00010021161 ENSBMSG00010021122 ENSBMSG00010021108 ENSBMSG00010021053 Cetacea DUPLICATION Cetacea DUPLICATION Cetacea ANCESTRAL SPECIES 29 ENSGT00940000163248 ENSGT00730000111626 ENSGT00940000164168 ENSGT00940000154467.b.a ##19 ENSGT00940000154172.ab.a.b.a.a #22 ENSGT00940000154197.b.a.a ##23 Odontoceti ANCESTRAL SPECIES ENSGT00940000154172.ab.a.b.a.a #22 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000154172.ab.a.b.a.a #22 Odontoceti_b ANCESTRAL SPECIES 22 ENSGT01050000244986.b.b.b.b.d.a.a.b ENSGT00390000018389 ENSGT00940000162717 ENSGT00940000153902.b ENSGT00530000063529.B ENSGT00940000154103.b ENSGT00950000182925.D.a.b.a.b ENSGT00940000162582.b ENSGT00940000162158.h ENSGT00450000040303.i.a.a.b.a ENSGT00390000013344.t ENSGT00940000162988.p ENSGT00940000162988.o ENSGT00950000182925.D.a.b.a.a.a.a.i ENSGT00950000182925.D.a.b.a.a.a.b ENSGT00940000154172.ab.a.b.a.a #22 Monodontidae ANCESTRAL SPECIES 34 ENSGT00940000162988.p ENSGT00940000162988.o ENSGT00950000182925.D.a.b.a.a.a.a.j ENSGT00950000182925.D.a.b.a.a.a.a.i ENSGT00950000182925.D.a.b.a.a.a.b ENSGT00940000154172.ab.a.b.a.a #22 Narwhal MODERN SPECIES 309 OTUD6A (ENSMMNG00015009597) AWAT2 (ENSMMNG00015009580) EDA (ENSMMNG00015009555) ENSMMNG00015009543 NALF2 (ENSMMNG00015009538) ENSMMNG00015009530 PJA1 (ENSMMNG00015009520) EFNB1 (ENSMMNG00015009506) STARD8 (ENSMMNG00015009480) YIPF6 (ENSMMNG00015009448) OPHN1 (ENSMMNG00015009417) AR (ENSMMNG00015009371) EDA2R (ENSMMNG00015009344) ENSMMNG00015009336 ENSMMNG00015009330 ENSMMNG00015009327 #22 ENSMMNG00015009322 ENSMMNG00015009316 ABITRAM (ENSMMNG00015009309) ENSMMNG00015009307 ENSMMNG00015009302 SPIN4 (ENSMMNG00015009295) ARHGEF9 (ENSMMNG00015009261) AMER1 (ENSMMNG00015016946) ASB12 (ENSMMNG00015016925) MTMR8 (ENSMMNG00015016867) ZC4H2 (ENSMMNG00015016824) ZC3H12B (ENSMMNG00015016788) LAS1L (ENSMMNG00015016763) MSN (ENSMMNG00015016724) VSIG4 (ENSMMNG00015016697) Beluga whale MODERN SPECIES 90 ENSDLEG00000008155 ENSDLEG00000008172 ENSDLEG00000008183 ENSDLEG00000008217 ENSDLEG00000008249 ENSDLEG00000008275 #22 SPIN3 (ENSDLEG00000008291) NBDY (ENSDLEG00000008326) UBQLN2 (ENSDLEG00000008355) KLF8 (ENSDLEG00000008387) RRAGB (ENSDLEG00000008420) MAGEH1 (ENSDLEG00000008506) PFKFB1 (ENSDLEG00000008567) ENSDLEG00000008775 APEX2 (ENSDLEG00000008787) ALAS2 (ENSDLEG00000008810) FAM104B (ENSDLEG00000008890) MAGED2 (ENSDLEG00000008921) ENSDLEG00000008997 GNL3L (ENSDLEG00000009043) FGD1 (ENSDLEG00000009089) Vaquita MODERN SPECIES 34 ENSPSNG00000020155 MTMR8 (ENSPSNG00000020062) ASB12 (ENSPSNG00000020040) AMER1 (ENSPSNG00000020033) ARHGEF9 (ENSPSNG00000019655) SPIN4 (ENSPSNG00000019553) ENSPSNG00000019531 ENSPSNG00000019497 ENSPSNG00000019376 ENSPSNG00000019276 ENSPSNG00000019256 ENSPSNG00000019242 ENSPSNG00000019211 ENSPSNG00000019180 ENSPSNG00000019165 ENSPSNG00000019149 #22 SPIN3 (ENSPSNG00000019132) NBDY (ENSPSNG00000019116) UBQLN2 (ENSPSNG00000019091) KLF8 (ENSPSNG00000018935) RRAGB (ENSPSNG00000018869) MAGEH1 (ENSPSNG00000018848) ENSPSNG00000018739 ENSPSNG00000018500 PFKFB1 (ENSPSNG00000018204) APEX2 (ENSPSNG00000018132) ALAS2 (ENSPSNG00000017951) FAM104B (ENSPSNG00000017830) MAGED2 (ENSPSNG00000017729) GNL3L (ENSPSNG00000017656) FGD1 (ENSPSNG00000017466) Sperm whale MODERN SPECIES 15 ENSPCTG00005015382 NUP210L (ENSPCTG00005015439) NPR1 (ENSPCTG00005015896) INTS3 (ENSPCTG00005016167) SLC27A3 (ENSPCTG00005016261) GATAD2B (ENSPCTG00005016424) ENSPCTG00005016521 S100A8 (ENSPCTG00005016557) S100A12 (ENSPCTG00005016598) S100A9 (ENSPCTG00005016642) ENSPCTG00005016678 ENSPCTG00005016724 ENSPCTG00005016816 ENSPCTG00005016869 IVL (ENSPCTG00005017017) S100A11 (ENSPCTG00005017173) #22 S100A10 (ENSPCTG00005017205) ##23 THEM4 (ENSPCTG00005017250) #24 TUFT1 (ENSPCTG00005017363) #34 SNX27 (ENSPCTG00005017684) #33 CELF3 (ENSPCTG00005017933) #32 RIIAD1 (ENSPCTG00005018184) #31 MRPL9 (ENSPCTG00005018221) #30 OAZ3 (ENSPCTG00005018289) #29 TDRKH (ENSPCTG00005018417) #28 POGZ (ENSPCTG00005018518) #36 PSMB4 (ENSPCTG00005018741) ENSPCTG00005018784 SELENBP1 (ENSPCTG00005018804) RFX5 (ENSPCTG00005019016) PI4KB (ENSPCTG00005019046) Blue whale DUPLICATION Blue whale MODERN SPECIES 3 ENSBMSG00010009354 USP45 (ENSBMSG00010009370) PNISR (ENSBMSG00010009388) COQ3 (ENSBMSG00010009417) FAXC (ENSBMSG00010009429) FBXL4 (ENSBMSG00010009444) POU3F2 (ENSBMSG00010009453) MMS22L (ENSBMSG00010009479) KLHL32 (ENSBMSG00010009564) NDUFAF4 (ENSBMSG00010009703) GPR63 (ENSBMSG00010009713) FHL5 (ENSBMSG00010009724) UFL1 (ENSBMSG00010009738) FUT9 (ENSBMSG00010009753) MANEA (ENSBMSG00010009767) ENSBMSG00010009776 #22 ENSBMSG00010009783 EPHA7 (ENSBMSG00010009802) ENSBMSG00010009879 MAP3K7 (ENSBMSG00010009904) BACH2 (ENSBMSG00010009952) GJA10 (ENSBMSG00010009965) CASP8AP2 (ENSBMSG00010009976) MDN1 (ENSBMSG00010010010) LYRM2 (ENSBMSG00010010072) ANKRD6 (ENSBMSG00010010104) RRAGD (ENSBMSG00010010138) UBE2J1 (ENSBMSG00010010166) GABRR2 (ENSBMSG00010010193) GABRR1 (ENSBMSG00010010211) PM20D2 (ENSBMSG00010010237) Blue whale MODERN SPECIES S100A6 (ENSBMSG00010019133) ENSBMSG00010019114 ENSBMSG00010019095 S100A8 (ENSBMSG00010019080) ENSBMSG00010019057 ENSBMSG00010019042 ENSBMSG00010019014 ENSBMSG00010018964 ENSBMSG00010018953 ENSBMSG00010018930 SPRR4 (ENSBMSG00010018919) ENSBMSG00010018889 ENSBMSG00010018868 CRCT1 (ENSBMSG00010018835) ENSBMSG00010018815 ##19 ENSBMSG00010018799 #22 S100A10 (ENSBMSG00010018778) ##23 THEM4 (ENSBMSG00010018743) #24 THEM5 (ENSBMSG00010018706) #25 C2CD4D (ENSBMSG00010018697) RORC (ENSBMSG00010018612) #26 LINGO4 (ENSBMSG00010018591) #27 TDRKH (ENSBMSG00010018475) #28 ENSBMSG00010018451 OAZ3 (ENSBMSG00010018287) #29 MRPL9 (ENSBMSG00010018243) #30 RIIAD1 (ENSBMSG00010018208) #31 CELF3 (ENSBMSG00010018090) #32 SNX27 (ENSBMSG00010017840) #33 TUFT1 (ENSBMSG00010017718) #34 CGN (ENSBMSG00010017607) Cetacea ANCESTRAL SPECIES ENSGT00390000002869 ENSGT00940000160475 ENSGT00940000161854 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162657 ENSGT00940000154467.a.h.a #19 ENSGT00940000154172.ab.a.b.a.b #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Odontoceti ANCESTRAL SPECIES ENSGT00940000161854 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162657 ENSGT00940000163248 ENSGT00940000164168 ENSGT00940000154467.a.h.a #19 ENSGT00940000154172.ab.a.b.a.b #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Odontoceti_a ANCESTRAL SPECIES ENSGT00390000002869 ENSGT00940000160475 ENSGT00940000161854 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162657 ENSGT00940000154467.a.h.a #19 ENSGT00940000154172.ab.a.b.a.b #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Dolphin MODERN SPECIES 4151 S100A11 (ENSTTRG00000001087) #22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000160475 ENSGT00940000161854 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162657 ENSGT00390000009110.`b.a ENSGT00940000154467.a.h.a #19 ENSGT00940000154172.ab.a.b.a.b #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Vaquita MODERN SPECIES S100A14 (ENSPSNG00000001408) S100A16 (ENSPSNG00000001392) ENSPSNG00000001377 S100A4 (ENSPSNG00000001347) S100A5 (ENSPSNG00000001323) S100A6 (ENSPSNG00000001310) S100A8 (ENSPSNG00000001301) S100A12 (ENSPSNG00000001285) S100A9 (ENSPSNG00000001270) ENSPSNG00000001247 ENSPSNG00000001227 ENSPSNG00000001169 ENSPSNG00000001131 ENSPSNG00000001116 ENSPSNG00000001017 #18 ENSPSNG00000000955 #22 ENSPSNG00000000934 ##23 THEM4 (ENSPSNG00000000910) #24 THEM5 (ENSPSNG00000000888) #25 C2CD4D (ENSPSNG00000000879) RORC (ENSPSNG00000000836) #26 LINGO4 (ENSPSNG00000000787) #27 TDRKH (ENSPSNG00000000758) #28 OAZ3 (ENSPSNG00000000680) #29 MRPL9 (ENSPSNG00000000615) #30 RIIAD1 (ENSPSNG00000000589) #31 CELF3 (ENSPSNG00000000542) #32 ENSPSNG00000000510 SNX27 (ENSPSNG00000000477) #33 TUFT1 (ENSPSNG00000000346) #34 ENSPSNG00000000227 #35 Monodontidae ANCESTRAL SPECIES ENSGT00940000160475 ENSGT00940000161854 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00390000009110.`b.a ENSGT00780000122937 ENSGT00940000154467.a.h.a #19 ENSGT00940000154172.ab.a.b.a.b #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Narwhal DUPLICATION Narwhal MODERN SPECIES 304 S100A16 (ENSMMNG00015001849) ENSMMNG00015001867 S100A3 (ENSMMNG00015001881) S100A4 (ENSMMNG00015001896) S100A5 (ENSMMNG00015001912) S100A6 (ENSMMNG00015001928) S100A8 (ENSMMNG00015001948) S100A12 (ENSMMNG00015001965) S100A9 (ENSMMNG00015001982) ENSMMNG00015001997 PRR9 (ENSMMNG00015002010) ENSMMNG00015002057 ENSMMNG00015002081 LCE7A (ENSMMNG00015002124) ENSMMNG00015002275 #19 ENSMMNG00015002355 #22 S100A10 (ENSMMNG00015002372) ##23 THEM4 (ENSMMNG00015002395) #24 THEM5 (ENSMMNG00015002421) #25 C2CD4D (ENSMMNG00015002439) RORC (ENSMMNG00015002466) #26 LINGO4 (ENSMMNG00015002524) #27 TDRKH (ENSMMNG00015002542) #28 OAZ3 (ENSMMNG00015002678) #29 MRPL9 (ENSMMNG00015002723) #30 RIIAD1 (ENSMMNG00015002736) #31 CELF3 (ENSMMNG00015002770) #32 SNX27 (ENSMMNG00015002820) #33 ENSMMNG00015002872 TUFT1 (ENSMMNG00015002908) #34 ENSMMNG00015003029 #35 Narwhal MODERN SPECIES 304 FPGT (ENSMMNG00015008924) LRRC53 (ENSMMNG00015008905) TNNI3K (ENSMMNG00015008876) ENSMMNG00015008854 CRYZ (ENSMMNG00015008831) TYW3 (ENSMMNG00015008797) LHX8 (ENSMMNG00015008773) SLC44A5 (ENSMMNG00015008716) ACADM (ENSMMNG00015008645) ENSMMNG00015008600 MSH4 (ENSMMNG00015008573) ENSMMNG00015008547 ENSMMNG00015008536 ENSMMNG00015008528 ST6GALNAC3 (ENSMMNG00015008517) ENSMMNG00015008506 #22 ST6GALNAC5 (ENSMMNG00015008499) PIGK (ENSMMNG00015008474) AK5 (ENSMMNG00015008449) ZZZ3 (ENSMMNG00015008405) USP33 (ENSMMNG00015008292) MIGA1 (ENSMMNG00015008259) NEXN (ENSMMNG00015008202) ENSMMNG00015008069 DNAJB4 (ENSMMNG00015007989) ENSMMNG00015007980 GIPC2 (ENSMMNG00015007950) PTGFR (ENSMMNG00015007927) ENSMMNG00015007918 ADGRL4 (ENSMMNG00015007843) ADGRL2 (ENSMMNG00015007756) Beluga whale MODERN SPECIES 99 LCE7A (ENSDLEG00000010318) ENSDLEG00000010357 #19 ENSDLEG00000010490 #22 S100A10 (ENSDLEG00000010501) ##23 THEM4 (ENSDLEG00000010507) #24 THEM5 (ENSDLEG00000010525) #25 C2CD4D (ENSDLEG00000010546) RORC (ENSDLEG00000010552) #26 LINGO4 (ENSDLEG00000010572) #27 TDRKH (ENSDLEG00000010583) #28 OAZ3 (ENSDLEG00000010629) #29 MRPL9 (ENSDLEG00000010649) #30 RIIAD1 (ENSDLEG00000010670) #31 CELF3 (ENSDLEG00000010719) #32 SNX27 (ENSDLEG00000011126) #33 TUFT1 (ENSDLEG00000011162) #34 ENSDLEG00000011272 #35 POGZ (ENSDLEG00000011330) #36 Blue whale MODERN SPECIES FGR (ENSBMSG00010007414) IFI6 (ENSBMSG00010000005) ENSBMSG00010000011 ENSBMSG00010000015 STX12 (ENSBMSG00010000024) PPP1R8 (ENSBMSG00010000031) THEMIS2 (ENSBMSG00010000049) ENSBMSG00010000072 SMPDL3B (ENSBMSG00010000155) XKR8 (ENSBMSG00010000229) EYA3 (ENSBMSG00010000306) PTAFR (ENSBMSG00010000435) ENSBMSG00010000451 ENSBMSG00010000494 SESN2 (ENSBMSG00010000531) ENSBMSG00010000561 #22 MED18 (ENSBMSG00010000572) ENSBMSG00010000590 ENSBMSG00010000628 RCC1 (ENSBMSG00010000732) TRNAU1AP (ENSBMSG00010000779) ENSBMSG00010000789 RAB42 (ENSBMSG00010000837) ENSBMSG00010000849 GMEB1 (ENSBMSG00010000875) YTHDF2 (ENSBMSG00010000900) OPRD1 (ENSBMSG00010000919) EPB41 (ENSBMSG00010001365) TMEM200B (ENSBMSG00010004052) SRSF4 (ENSBMSG00010004066) MECR (ENSBMSG00010004086) Cetacea ANCESTRAL SPECIES 21 ENSGT00950000182925.D.a.b.a.b ENSGT00940000154103.b ENSGT00530000063529.B ENSGT00940000153902.b ENSGT00940000162717 ENSGT00940000153664.A.b.a ENSGT00390000018389 ENSGT00940000159316 ENSGT00390000014785 ENSGT01090000260082.d.a.a.a.a ENSGT00390000001432 ENSGT00940000158517 ENSGT00940000154172.ab.a.b.b #22 ENSGT00950000182925.D.a.b.b ENSGT00390000004891 ENSGT00940000162603 ENSGT00940000161062 ENSGT00950000183031.B.e.a ENSGT00940000162993 ENSGT00840000130063 ENSGT00940000162763 ENSGT00950000182835.c.c ENSGT00530000063540.a ENSGT00940000159912 ENSGT00940000161795 ENSGT00940000162980 ENSGT00940000155877 ENSGT00940000159438 Blue whale MODERN SPECIES 40 ENSBMSG00010017314 ENSBMSG00010017291 HEPH (ENSBMSG00010016714) VSIG4 (ENSBMSG00010016469) MSN (ENSBMSG00010016394) LAS1L (ENSBMSG00010016351) ZC3H12B (ENSBMSG00010016325) ZC4H2 (ENSBMSG00010016215) ENSBMSG00010015931 AMER1 (ENSBMSG00010015855) ENSBMSG00010019422 ENSBMSG00010019410 ENSBMSG00010019396 ENSBMSG00010019380 ENSBMSG00010019367 ENSBMSG00010019353 #22 SPIN3 (ENSBMSG00010019338) ENSBMSG00010019331 NBDY (ENSBMSG00010019319) UBQLN2 (ENSBMSG00010019310) KLF8 (ENSBMSG00010019225) RRAGB (ENSBMSG00010019141) FOXR2 (ENSBMSG00010019118) MAGEH1 (ENSBMSG00010019102) ENSBMSG00010018946 PFKFB1 (ENSBMSG00010018787) APEX2 (ENSBMSG00010018751) ALAS2 (ENSBMSG00010018686) ENSBMSG00010018665 MAGED2 (ENSBMSG00010018562) GNL3L (ENSBMSG00010018498) Odontoceti ANCESTRAL SPECIES 22 ENSGT00950000182925.D.a.b.a.b ENSGT00940000154103.b ENSGT00530000063529.B ENSGT00940000153902.b ENSGT00940000162717 ENSGT00940000153664.A.b.a ENSGT00390000018389 ENSGT01050000244986.b.b.b.b.d.a ENSGT00910000146855 ENSGT00940000159316 ENSGT00390000014785 ENSGT01090000260082.d.a.a.a.a ENSGT00390000001432 ENSGT00940000158517 ENSGT00940000154172.ab.a.b.b #22 ENSGT00950000182925.D.a.b.b ENSGT00390000004891 ENSGT00940000162603 ENSGT00940000161062 ENSGT00950000183031.B.e.a ENSGT00940000162993 ENSGT00840000130063 ENSGT00940000153097.B.a.b ENSGT00940000162763 ENSGT00950000182835.c.c ENSGT00530000063540.a ENSGT00940000159912 ENSGT00940000161795 ENSGT00940000162980 ENSGT00940000155877 Sperm whale MODERN SPECIES 13 ENSPCTG00005018177 ALAS2 (ENSPCTG00005018232) APEX2 (ENSPCTG00005018476) PFKFB1 (ENSPCTG00005018527) ENSPCTG00005018864 ENSPCTG00005019180 MAGEH1 (ENSPCTG00005019268) FOXR2 (ENSPCTG00005019282) RRAGB (ENSPCTG00005004573) KLF8 (ENSPCTG00005004731) UBQLN2 (ENSPCTG00005004778) NBDY (ENSPCTG00005004789) ENSPCTG00005004800 ENSPCTG00005004809 ENSPCTG00005004833 ENSPCTG00005004848 #22 SPIN3 (ENSPCTG00005004862) ENSPCTG00005004885 ENSPCTG00005004903 ENSPCTG00005004926 ENSPCTG00005004992 ENSPCTG00005005014 ENSPCTG00005005075 ENSPCTG00005005141 ENSPCTG00005005167 ENSPCTG00005005217 ENSPCTG00005005340 ENSPCTG00005005360 SPIN4 (ENSPCTG00005005412) ENSPCTG00005005423 ARHGEF9 (ENSPCTG00005005494) Cetacea ANCESTRAL SPECIES 8 ENSGT00940000162357 ENSGT00940000160727 ENSGT00390000018775 ENSGT00390000014572.eb.b ENSGT00440000039564.b ENSGT00940000153362.a ENSGT00390000002417 ENSGT00940000156622 ENSGT00530000063074.b.b ENSGT00940000154980.cb ENSGT00940000157713 ENSGT00940000158014 ENSGT00940000155394 ENSGT00390000000406 ENSGT00940000156120.a ENSGT00940000154172.ab.b #22 ENSGT00940000160698 ENSGT00940000159215 ENSGT00950000182959.a.b.b.a ENSGT00950000182959.a.a ENSGT00940000153222.a.a ENSGT00940000157479 ENSGT01050000244900.a.a.a.a.b ENSGT00390000006546 ENSGT00530000063745.b ENSGT00940000156144 ENSGT00940000157277 ENSGT00940000163725 ENSGT00940000162858 ENSGT00940000158251 ENSGT00950000182839.A.c Odontoceti ANCESTRAL SPECIES 7 ENSGT00940000162357 ENSGT00940000160727 ENSGT00390000018775 ENSGT00390000014572.eb.b ENSGT00440000039564.b ENSGT00940000153362.a ENSGT00390000002417 ENSGT00940000156622 ENSGT00530000063074.b.b ENSGT00940000154980.cb ENSGT00940000157713 ENSGT00940000158014 ENSGT00940000155394 ENSGT00390000000406 ENSGT00940000156120.a ENSGT00940000154172.ab.b #22 ENSGT00940000160698 ENSGT00940000159215 ENSGT00950000182959.a.b.b.a ENSGT00950000182959.a.a ENSGT00940000153222.a.a ENSGT00940000157479 ENSGT01050000244900.a.a.a.a.b ENSGT00390000006546 ENSGT00530000063745.b ENSGT00940000156144 ENSGT00940000157277 ENSGT00940000163725 ENSGT00940000162858 ENSGT00940000158251 ENSGT00950000182839.A.c Odontoceti_a ANCESTRAL SPECIES 6 ENSGT00940000162357 ENSGT00940000160727 ENSGT00390000018775 ENSGT00390000014572.eb.b ENSGT00440000039564.b ENSGT00940000153362.a ENSGT00390000002417 ENSGT00940000156622 ENSGT00530000063074.b.b ENSGT00940000154980.cb ENSGT00940000157713 ENSGT00940000158014 ENSGT00940000155394 ENSGT00390000000406 ENSGT00940000156120.a ENSGT00940000154172.ab.b #22 ENSGT00940000160698 ENSGT00940000159215 ENSGT00950000182959.a.b.b.a ENSGT00950000182959.a.a ENSGT00940000153222.a.a ENSGT00940000157479 ENSGT01050000244900.a.a.a.a.b ENSGT00390000006546 ENSGT00530000063745.b ENSGT00940000156144 ENSGT00940000157277 ENSGT00940000163725 ENSGT00940000162858 ENSGT00940000158251 ENSGT00950000182839.A.c Odontoceti_b ANCESTRAL SPECIES 7 ENSGT00940000162357 ENSGT00940000160727 ENSGT00390000018775 ENSGT00390000014572.eb.b ENSGT00440000039564.b ENSGT00940000153362.a ENSGT00390000002417 ENSGT00940000156622 ENSGT00530000063074.b.b ENSGT00940000154980.cb ENSGT00940000157713 ENSGT00940000158014 ENSGT00940000155394 ENSGT00390000000406 ENSGT00940000156120.a ENSGT00940000154172.ab.b #22 ENSGT00940000160698 ENSGT00940000159215 ENSGT00950000182959.a.b.b.a ENSGT00950000182959.a.a ENSGT00940000153222.a.a ENSGT00940000157479 ENSGT01050000244900.a.a.a.a.b ENSGT00390000006546 ENSGT00530000063745.b ENSGT00940000156144 ENSGT00390000004735.A.n ENSGT00940000157277 ENSGT00940000163725 ENSGT00940000162858 ENSGT00940000158251 Monodontidae ANCESTRAL SPECIES 6 ENSGT00940000160727 ENSGT00390000018775 ENSGT00390000014572.eb.b ENSGT00440000039564.b ENSGT00940000153362.a ENSGT00390000002417 ENSGT00940000156622 ENSGT00530000063074.b.b ENSGT00940000154980.bb.a ENSGT00940000154980.cb ENSGT00940000157713 ENSGT00940000158014 ENSGT00940000155394 ENSGT00390000000406 ENSGT00940000156120.a ENSGT00940000154172.ab.b #22 ENSGT00940000160698 ENSGT00940000159215 ENSGT00950000182959.a.b.b.a ENSGT00950000182959.a.a ENSGT00940000153222.a.a ENSGT00940000157479 ENSGT01050000244900.a.a.a.a.b ENSGT00390000006546 ENSGT00530000063745.b ENSGT00940000156144 ENSGT00390000004735.A.n ENSGT00940000157277 ENSGT00940000163725 ENSGT00940000162858 ENSGT00940000158251 Beluga whale MODERN SPECIES 39 KRR1 (ENSDLEG00000007544) ENSDLEG00000007528 PHLDA1 (ENSDLEG00000007521) ENSDLEG00000007438 BBS10 (ENSDLEG00000007426) OSBPL8 (ENSDLEG00000007401) ENSDLEG00000007371 ZDHHC17 (ENSDLEG00000007362) CSRP2 (ENSDLEG00000007353) ENSDLEG00000007329 ENSDLEG00000007322 NAV3 (ENSDLEG00000006608) SYT1 (ENSDLEG00000006456) ENSDLEG00000006452 PAWR (ENSDLEG00000006445) ENSDLEG00000006442 #22 PPP1R12A (ENSDLEG00000006433) OTOGL (ENSDLEG00000006234) PTPRQ (ENSDLEG00000006066) MYF6 (ENSDLEG00000006023) MYF5 (ENSDLEG00000006018) LIN7A (ENSDLEG00000005973) ACSS3 (ENSDLEG00000005911) PPFIA2 (ENSDLEG00000005438) Narwhal MODERN SPECIES 313 KRR1 (ENSMMNG00015016424) ENSMMNG00015016472 PHLDA1 (ENSMMNG00015016497) NAP1L1 (ENSMMNG00015016626) BBS10 (ENSMMNG00015017120) OSBPL8 (ENSMMNG00015017163) ZDHHC17 (ENSMMNG00015017285) ENSMMNG00015017474 CSRP2 (ENSMMNG00015017494) E2F7 (ENSMMNG00015017553) NAV3 (ENSMMNG00015017728) SYT1 (ENSMMNG00015017994) PAWR (ENSMMNG00015018035) ENSMMNG00015018085 PPP1R12A (ENSMMNG00015018194) ENSMMNG00015018420 #22 OTOGL (ENSMMNG00015018567) PTPRQ (ENSMMNG00015019359) MYF6 (ENSMMNG00015019715) MYF5 (ENSMMNG00015019736) LIN7A (ENSMMNG00015019774) ENSMMNG00015019830 ACSS3 (ENSMMNG00015019853) PPFIA2 (ENSMMNG00015020218) CCDC59 (ENSMMNG00015020720) METTL25 (ENSMMNG00015020747) TMTC2 (ENSMMNG00015020798) FAM50A (ENSMMNG00015020820) SLC6A15 (ENSMMNG00015020847) TSPAN19 (ENSMMNG00015020883) LRRIQ1 (ENSMMNG00015020965) Vaquita MODERN SPECIES 1 KRR1 (ENSPSNG00000011619) ENSPSNG00000011566 ENSPSNG00000011534 ENSPSNG00000011336 BBS10 (ENSPSNG00000011255) OSBPL8 (ENSPSNG00000010975) ENSPSNG00000010941 ENSPSNG00000010920 ZDHHC17 (ENSPSNG00000010872) CSRP2 (ENSPSNG00000010823) E2F7 (ENSPSNG00000010547) NAV3 (ENSPSNG00000009074) ENSPSNG00000008562 SYT1 (ENSPSNG00000008513) PAWR (ENSPSNG00000008439) ENSPSNG00000008403 #22 PPP1R12A (ENSPSNG00000008207) OTOGL (ENSPSNG00000007188) PTPRQ (ENSPSNG00000006652) MYF6 (ENSPSNG00000006531) MYF5 (ENSPSNG00000006510) LIN7A (ENSPSNG00000006484) ACSS3 (ENSPSNG00000006403) PPFIA2 (ENSPSNG00000005685) ENSPSNG00000005450 METTL25 (ENSPSNG00000005420) FAM50A (ENSPSNG00000005402) TMTC2 (ENSPSNG00000005299) ENSPSNG00000005260 SLC6A15 (ENSPSNG00000005229) TSPAN19 (ENSPSNG00000005188) Sperm whale MODERN SPECIES 17 KRR1 (ENSPCTG00005009253) ENSPCTG00005009342 PHLDA1 (ENSPCTG00005009371) NAP1L1 (ENSPCTG00005009406) ENSPCTG00005009623 ENSPCTG00005009647 BBS10 (ENSPCTG00005009666) OSBPL8 (ENSPCTG00005009709) ZDHHC17 (ENSPCTG00005009874) CSRP2 (ENSPCTG00005009938) E2F7 (ENSPCTG00005009995) NAV3 (ENSPCTG00005010415) SYT1 (ENSPCTG00005012311) PAWR (ENSPCTG00005012474) PPP1R12A (ENSPCTG00005012575) ENSPCTG00005012953 #22 OTOGL (ENSPCTG00005013033) PTPRQ (ENSPCTG00005015293) MYF6 (ENSPCTG00005016374) MYF5 (ENSPCTG00005016429) LIN7A (ENSPCTG00005016469) ACSS3 (ENSPCTG00005016578) PPFIA2 (ENSPCTG00005017124) CCDC59 (ENSPCTG00005020122) METTL25 (ENSPCTG00005020146) ENSPCTG00005020220 TMTC2 (ENSPCTG00005020242) SLC6A15 (ENSPCTG00005020350) TSPAN19 (ENSPCTG00005020436) LRRIQ1 (ENSPCTG00005020500) ALX1 (ENSPCTG00005020630) Blue whale MODERN SPECIES 1 GLIPR1 (ENSBMSG00010020669) KRR1 (ENSBMSG00010020702) ENSBMSG00010020727 PHLDA1 (ENSBMSG00010020734) NAP1L1 (ENSBMSG00010020766) BBS10 (ENSBMSG00010020864) OSBPL8 (ENSBMSG00010020883) ZDHHC17 (ENSBMSG00010020913) CSRP2 (ENSBMSG00010020929) E2F7 (ENSBMSG00010020948) NAV3 (ENSBMSG00010021020) ENSBMSG00010021165 SYT1 (ENSBMSG00010021177) PAWR (ENSBMSG00010021183) PPP1R12A (ENSBMSG00010021198) ENSBMSG00010021208 #22 OTOGL (ENSBMSG00010021255) PTPRQ (ENSBMSG00010007468) MYF6 (ENSBMSG00010007564) MYF5 (ENSBMSG00010007571) LIN7A (ENSBMSG00010007592) ENSBMSG00010007609 ACSS3 (ENSBMSG00010007621) PPFIA2 (ENSBMSG00010007808) CCDC59 (ENSBMSG00010008631) METTL25 (ENSBMSG00010008637) ENSBMSG00010008650 TMTC2 (ENSBMSG00010008658) ENSBMSG00010008664 SLC6A15 (ENSBMSG00010008679) TSPAN19 (ENSBMSG00010008692) Cetacea ANCESTRAL SPECIES 3 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000162810 ENSGT00940000158524 ENSGT00390000013178 ENSGT00510000049120 ENSGT00940000157626 ENSGT00940000159443 ENSGT00940000157511 ENSGT00940000160795 ENSGT00510000049083.b ENSGT00390000017668 ENSGT00940000158546 ENSGT00940000154172.bb #22 ENSGT00950000182953.C.c ENSGT00390000008694.b.b.c.a ENSGT00390000004965.v.a ENSGT00940000158877 ENSGT00940000154544.b ENSGT00440000033970 ENSGT00390000014969 ENSGT00940000154206.b ENSGT00390000008327 ENSGT01090000260080.a ENSGT00390000001607 ENSGT00940000161448 ENSGT00390000013444.a.b.a ENSGT00940000155666.c ENSGT00390000018717.b.a.a Odontoceti ANCESTRAL SPECIES 3 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000162810 ENSGT00940000158524 ENSGT00390000013178 ENSGT00510000049120 ENSGT00940000157626 ENSGT00940000159443 ENSGT00940000157511 ENSGT00940000160795 ENSGT00510000049083.b ENSGT00390000017668 ENSGT00940000158546 ENSGT00940000154172.bb #22 ENSGT00950000182953.C.c ENSGT01000000221962 ENSGT00390000008694.b.b.c.a ENSGT00390000004965.v.a ENSGT00940000158877 ENSGT00940000154544.b ENSGT00440000033970 ENSGT00390000014969 ENSGT00940000154206.b ENSGT00390000008327 ENSGT01090000260080.a ENSGT00390000001607 ENSGT00940000161448 ENSGT00390000013444.a.b.a ENSGT00940000155666.c Sperm whale MODERN SPECIES 5 SIGLEC1 (ENSPCTG00005007659) HSPA12B (ENSPCTG00005007721) C14H20orf27 (ENSPCTG00005007760) SPEF1 (ENSPCTG00005007822) CENPB (ENSPCTG00005007840) CDC25B (ENSPCTG00005007899) AP5S1 (ENSPCTG00005008195) AP5S1 (ENSPCTG00005008250) PANK2 (ENSPCTG00005008276) RNF24 (ENSPCTG00005008321) SMOX (ENSPCTG00005008365) ADRA1D (ENSPCTG00005008471) PRNP (ENSPCTG00005008490) PRND (ENSPCTG00005008500) RASSF2 (ENSPCTG00005008514) ENSPCTG00005008551 #22 SLC23A2 (ENSPCTG00005008576) ENSPCTG00005008662 TMEM230 (ENSPCTG00005008681) PCNA (ENSPCTG00005008705) CDS2 (ENSPCTG00005008734) PROKR2 (ENSPCTG00005008803) GPCPD1 (ENSPCTG00005008836) SHLD1 (ENSPCTG00005008992) ENSPCTG00005009049 CHGB (ENSPCTG00005009086) TRMT6 (ENSPCTG00005009158) MCM8 (ENSPCTG00005009328) CRLS1 (ENSPCTG00005009475) LRRN4 (ENSPCTG00005009641) FERMT1 (ENSPCTG00005009690) Eulipotyphla ANCESTRAL SPECIES ENSGT00940000154172 #22 Common shrew MODERN SPECIES 8617 S100A11 (ENSSARG00000006403) #22 Hedgehog MODERN SPECIES 5541 S100A11 (ENSEEUG00000005210) #22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183278 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905 ENSGT00940000163498 #15 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Primates ANCESTRAL SPECIES 7 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00730000111580 ENSGT00940000163498 #15 ENSGT00940000165404 ENSGT00940000163905 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Strepsirrhini DUPLICATION Strepsirrhini ANCESTRAL SPECIES ENSGT00940000154172.cb #22 Lemuriformes ANCESTRAL SPECIES ENSGT00940000154172.cb #22 Lemuriformes_a ANCESTRAL SPECIES ENSGT00940000154172.cb #22 Greater bamboo lemur MODERN SPECIES 628 USP48 (ENSPSMG00000010051) ENSPSMG00000010122 #22 LDLRAD2 (ENSPSMG00000010129) HSPG2 (ENSPSMG00000010175) Strepsirrhini ANCESTRAL SPECIES ENSGT00940000164168 ENSGT00950000183312 ENSGT00950000183278 ENSGT00950000183301 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00730000111580 ENSGT00940000163498 #15 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.db #22 ENSGT00940000154197.a.b.b.a.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000162698 #35 Lemuriformes ANCESTRAL SPECIES 11 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000162657 ENSGT01050000248066 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163498 #15 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.db #22 ENSGT00940000154197.a.b.b.a.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364.c.a #28 ENSGT00940000159364.d #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B Lemuriformes_a ANCESTRAL SPECIES 19 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000162657 ENSGT01050000248066 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163498 #15 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.db #22 ENSGT00940000154197.a.b.b.a.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364.d #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000160649 #36 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 750 ENSPCOG00000020736 ENSPCOG00000005069 LCE1A (ENSPCOG00000014104) ENSPCOG00000015616 ENSPCOG00000008709 KPRP (ENSPCOG00000021958) C1orf68 (ENSPCOG00000023636) ENSPCOG00000001203 #15 CRCT1 (ENSPCOG00000011277) LCE5A (ENSPCOG00000027645) CRNN (ENSPCOG00000026061) #16 ENSPCOG00000012452 #17 RPTN (ENSPCOG00000026386) #19 ENSPCOG00000027718 TCHHL1 (ENSPCOG00000020430) #21 ENSPCOG00000014836 #22 ENSPCOG00000014964 ##23 THEM4 (ENSPCOG00000027613) #24 THEM5 (ENSPCOG00000028042) #25 RORC (ENSPCOG00000007539) #26 LINGO4 (ENSPCOG00000000761) #27 TDRKH (ENSPCOG00000027505) #28 OAZ3 (ENSPCOG00000006254) #29 MRPL9 (ENSPCOG00000006826) #30 RIIAD1 (ENSPCOG00000019169) #31 CELF3 (ENSPCOG00000004694) #32 SNX27 (ENSPCOG00000024065) #33 TUFT1 (ENSPCOG00000017274) #34 CGN (ENSPCOG00000022079) POGZ (ENSPCOG00000016891) #36 ENSPCOG00000023754 Coquerels sifaka MODERN SPECIES 550 ENSPCOG00000027344 POLR1H (ENSPCOG00000026305) PPP1R11 (ENSPCOG00000015537) RNF39 (ENSPCOG00000020051) ENSPCOG00000025516 ENSPCOG00000016944 TRIM10 (ENSPCOG00000006661) ENSPCOG00000023757 ENSPCOG00000018346 TRIM26 (ENSPCOG00000017528) TRIM39 (ENSPCOG00000019078) RPP21 (ENSPCOG00000024263) HLA-E (ENSPCOG00000006645) ENSPCOG00000000107 #22 GNL1 (ENSPCOG00000015669) PRR3 (ENSPCOG00000018694) ABCF1 (ENSPCOG00000027213) PPP1R10 (ENSPCOG00000018147) MRPS18B (ENSPCOG00000015431) ATAT1 (ENSPCOG00000027406) C6orf136 (ENSPCOG00000012959) DHX16 (ENSPCOG00000013298) PPP1R18 (ENSPCOG00000015641) NRM (ENSPCOG00000009272) ENSPCOG00000027754 TUBB (ENSPCOG00000022809) FLOT1 (ENSPCOG00000013641) IER3 (ENSPCOG00000022268) DDR1 (ENSPCOG00000020265) Greater bamboo lemur MODERN SPECIES 922 S100A11 (ENSPSMG00000003060) #22 S100A10 (ENSPSMG00000003065) ##23 THEM4 (ENSPSMG00000003087) #24 THEM5 (ENSPSMG00000003096) #25 C2CD4D (ENSPSMG00000003103) RORC (ENSPSMG00000003228) #26 LINGO4 (ENSPSMG00000003452) #27 TDRKH (ENSPSMG00000003537) #28 OAZ3 (ENSPSMG00000003728) #29 MRPL9 (ENSPSMG00000003757) #30 RIIAD1 (ENSPSMG00000003769) #31 CELF3 (ENSPSMG00000003865) #32 SNX27 (ENSPSMG00000003967) #33 TUFT1 (ENSPSMG00000004202) #34 CGN (ENSPSMG00000004302) POGZ (ENSPSMG00000004693) #36 Mouse lemur MODERN SPECIES 11 LRIF1 (ENSMICG00000031355) ENSMICG00000027685 DRAM2 (ENSMICG00000011901) CEPT1 (ENSMICG00000011912) DENND2D (ENSMICG00000011941) CHI3L2 (ENSMICG00000011949) ENSMICG00000042775 CHIA (ENSMICG00000011957) PIFO (ENSMICG00000011967) WDR77 (ENSMICG00000011979) ATP5PB (ENSMICG00000011992) C1orf162 (ENSMICG00000045892) CRNN (ENSMICG00000035667) #16 RPTN (ENSMICG00000034831) #19 ENSMICG00000028753 S100A11 (ENSMICG00000034130) #22 ENSMICG00000016734 ##23 ENSMICG00000010696 #24 THEM5 (ENSMICG00000035350) #25 RORC (ENSMICG00000030874) #26 ENSMICG00000010682 #28 OAZ3 (ENSMICG00000010676) #29 MRPL9 (ENSMICG00000010669) #30 RIIAD1 (ENSMICG00000033323) #31 CELF3 (ENSMICG00000010644) #32 SNX27 (ENSMICG00000028737) #33 TUFT1 (ENSMICG00000016784) #34 ENSMICG00000016767 #35 POGZ (ENSMICG00000016751) #36 PSMB4 (ENSMICG00000016746) SELENBP1 (ENSMICG00000016742) Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby MODERN SPECIES 289 KPRP (ENSOGAG00000024925) ENSOGAG00000016304 ENSOGAG00000008210 C1orf68 (ENSOGAG00000011135) ENSOGAG00000008506 CRNN (ENSOGAG00000010176) #16 ENSOGAG00000034312 #17 RPTN (ENSOGAG00000034810) #19 ENSOGAG00000026807 ENSOGAG00000014929 #22 ENSOGAG00000016426 ##23 THEM4 (ENSOGAG00000003191) #24 THEM5 (ENSOGAG00000003189) #25 C2CD4D (ENSOGAG00000033100) RORC (ENSOGAG00000024385) #26 LINGO4 (ENSOGAG00000005085) #27 ENSOGAG00000032357 ENSOGAG00000001839 #28 OAZ3 (ENSOGAG00000001836) #29 ENSOGAG00000030456 #30 CELF3 (ENSOGAG00000001830) #32 ENSOGAG00000005184 TUFT1 (ENSOGAG00000005177) #34 ENSOGAG00000005174 #35 POGZ (ENSOGAG00000008128) #36 Bushbaby MODERN SPECIES 144 ENSOGAG00000006589 RHCG (ENSOGAG00000008151) POLG (ENSOGAG00000008148) FANCI (ENSOGAG00000008142) RLBP1 (ENSOGAG00000008139) ABHD2 (ENSOGAG00000008133) MFGE8 (ENSOGAG00000017042) HAPLN3 (ENSOGAG00000017041) ACAN (ENSOGAG00000017035) ISG20 (ENSOGAG00000004742) AEN (ENSOGAG00000029852) DET1 (ENSOGAG00000004741) MRPS11 (ENSOGAG00000004739) MRPL46 (ENSOGAG00000004736) NTRK3 (ENSOGAG00000004733) ENSOGAG00000033402 #22 ENSOGAG00000027084 KLHL25 (ENSOGAG00000026263) ENSOGAG00000007724 ENSOGAG00000030493 ENSOGAG00000025991 SV2B (ENSOGAG00000005530) SLCO3A1 (ENSOGAG00000007636) ST8SIA2 (ENSOGAG00000016823) FAM174B (ENSOGAG00000030213) ENSOGAG00000030130 ENSOGAG00000032258 CHD2 (ENSOGAG00000010399) RGMA (ENSOGAG00000010419) ENSOGAG00000025213 MCTP2 (ENSOGAG00000008665) Bushbaby MODERN SPECIES 130 FRMD4B (ENSOGAG00000002705) LMOD3 (ENSOGAG00000002704) ARL6IP5 (ENSOGAG00000007773) UBA3 (ENSOGAG00000007771) TMF1 (ENSOGAG00000007764) EOGT (ENSOGAG00000012093) TAFA4 (ENSOGAG00000012090) ENSOGAG00000028255 ENSOGAG00000006190 KBTBD8 (ENSOGAG00000024533) ENSOGAG00000024724 ENSOGAG00000006131 LRIG1 (ENSOGAG00000002220) ENSOGAG00000007944 SLC25A26 (ENSOGAG00000002219) ENSOGAG00000033711 #22 MAGI1 (ENSOGAG00000000286) ADAMTS9 (ENSOGAG00000015548) PRICKLE2 (ENSOGAG00000009507) ENSOGAG00000028241 PSMD6 (ENSOGAG00000015279) ATXN7 (ENSOGAG00000031555) THOC7 (ENSOGAG00000024865) C3orf49 (ENSOGAG00000015268) ENSOGAG00000030192 SNTN (ENSOGAG00000016059) SYNPR (ENSOGAG00000000442) ENSOGAG00000008116 FEZF2 (ENSOGAG00000008112) C3orf14 (ENSOGAG00000008107) PTPRG (ENSOGAG00000008069) Bushbaby MODERN SPECIES 221 ENSOGAG00000029408 #22 ENSOGAG00000030653 SUCLA2 (ENSOGAG00000007452) NUDT15 (ENSOGAG00000024482) MED4 (ENSOGAG00000007456) ITM2B (ENSOGAG00000007459) ENSOGAG00000033501 RB1 (ENSOGAG00000007461) LPAR6 (ENSOGAG00000007467) RCBTB2 (ENSOGAG00000007469) CRYL1 (ENSOGAG00000016250) ENSOGAG00000030885 GJB6 (ENSOGAG00000005343) GJB2 (ENSOGAG00000011675) GJA3 (ENSOGAG00000015365) ZMYM2 (ENSOGAG00000015350) Bushbaby MODERN SPECIES 147 CEP63 (ENSOGAG00000007092) ANAPC13 (ENSOGAG00000027590) AMOTL2 (ENSOGAG00000029681) RYK (ENSOGAG00000000335) ENSOGAG00000032681 SLCO2A1 (ENSOGAG00000005247) RAB6B (ENSOGAG00000005245) SRPRB (ENSOGAG00000005243) TF (ENSOGAG00000005240) ENSOGAG00000031553 TOPBP1 (ENSOGAG00000002100) CDV3 (ENSOGAG00000002098) BFSP2 (ENSOGAG00000002095) TMEM108 (ENSOGAG00000026581) ENSOGAG00000029413 ENSOGAG00000033681 #22 NPHP3 (ENSOGAG00000007842) UBA5 (ENSOGAG00000004863) ACKR4 (ENSOGAG00000007841) ACAD11 (ENSOGAG00000028093) ACTR8 (ENSOGAG00000016944) IL17RB (ENSOGAG00000016938) CHDH (ENSOGAG00000016934) CACNA1D (ENSOGAG00000016920) DCP1A (ENSOGAG00000016915) TKT (ENSOGAG00000016911) PRKCD (ENSOGAG00000004030) RFT1 (ENSOGAG00000003296) SFMBT1 (ENSOGAG00000004126) STIMATE (ENSOGAG00000033993) ITIH4 (ENSOGAG00000004121) Haplorrhini ANCESTRAL SPECIES 7 ENSGT00730000111580 ENSGT01090000263307 ENSGT00940000161842.b ENSGT00940000163498 #15 ENSGT00940000165404 ENSGT00940000163905 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Tarsier DUPLICATION Tarsier DUPLICATION Tarsier MODERN SPECIES 3731 ENSTSYG00000037098 #22 Tarsier MODERN SPECIES 5033 ENSTSYG00000037318 ENSTSYG00000025570 #22 S100A10 (ENSTSYG00000030364) ##23 THEM4 (ENSTSYG00000005739) #24 THEM5 (ENSTSYG00000004917) #25 RORC (ENSTSYG00000010455) #26 LINGO4 (ENSTSYG00000036443) #27 TDRKH (ENSTSYG00000010405) #28 OAZ3 (ENSTSYG00000006300) #29 MRPL9 (ENSTSYG00000006296) #30 RIIAD1 (ENSTSYG00000025851) #31 Tarsier MODERN SPECIES 5375 ENSTSYG00000036385 ASXL2 (ENSTSYG00000010372) ENSTSYG00000032861 #22 ENSTSYG00000032180 Simiiformes DUPLICATION Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES 79 ENSGT00940000154172.gb.a #22 ENSGT00940000154197.a.a #23 Catarrhini ANCESTRAL SPECIES 29 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b.rb ENSGT00940000154172.gb.a #22 ENSGT00950000183157.a.a.b ENSGT00910000147936 ENSGT00510000048032 ENSGT00940000154303.A.b ENSGT00940000154173.A.a.c.a ENSGT00940000157972 ENSGT00940000164307 ENSGT00940000159293 ENSGT00390000017592 ENSGT00940000159507 ENSGT00940000157747 ENSGT00940000158573 ENSGT00940000157636 ENSGT00530000063996.b ENSGT00390000017551 Hominoidea ANCESTRAL SPECIES 6 ENSGT00940000157636 ENSGT00940000158573 ENSGT00940000157747 ENSGT00940000159507 ENSGT00390000017592 ENSGT00940000164307 ENSGT00940000159293 ENSGT00940000157972 ENSGT00940000154173.A.a.c.a ENSGT00940000154303.A.b ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b.rb.x ENSGT00940000154172.gb.a #22 ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00390000004713.c ENSGT00940000159899 ENSGT00940000155381 ENSGT00390000015826 ENSGT00940000157605 ENSGT00840000130004 ENSGT00940000154596.b ENSGT00940000155825 ENSGT00390000014547.c ENSGT00940000153500.a.a.k.b ENSGT00390000014156.c ENSGT00940000153500.a.a.k.a.a ENSGT00940000156486 Hominidae ANCESTRAL SPECIES 26 ENSGT00530000063996.b ENSGT00940000157636 ENSGT00940000158573 ENSGT00940000157747 ENSGT00940000159507 ENSGT00390000017592 ENSGT00940000164307 ENSGT00940000159293 ENSGT00940000157972 ENSGT00940000154303.A.b ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b.rb.x ENSGT00940000154172.gb.a #22 ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00390000004713.c ENSGT00940000159899 ENSGT00940000155381 ENSGT00390000015826 ENSGT00940000157605 ENSGT00840000130004 ENSGT00940000154596.b ENSGT00940000155825 ENSGT00390000014547.c ENSGT00940000153500.a.a.k.b ENSGT00390000014156.c ENSGT00940000153500.a.a.k.a.a ENSGT00940000156486 Homo/Pan/Gorilla group ANCESTRAL SPECIES 31 ENSGT00940000157636 ENSGT00940000158573 ENSGT00940000157747 ENSGT00940000159507 ENSGT00390000017592 ENSGT00940000164307 ENSGT00940000159293 ENSGT00940000157972 ENSGT00910000146651.a ENSGT00940000154303.A.b ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b.rb.x ENSGT00940000154172.gb.a #22 ENSGT00950000183157.a.a.b.x ENSGT00510000048032 ENSGT00940000161875.c.a ENSGT00390000004713.c ENSGT00940000159899 ENSGT00940000155381.s ENSGT00940000154173.A.a.c.a.a ENSGT00940000154303.B ENSGT00940000162728 ENSGT00940000156663.B ENSGT00390000011370 ENSGT00910000146965 ENSGT00920000149163 ENSGT00940000157625.b ENSGT00390000004010.a.b.a Homo/Pan group ANCESTRAL SPECIES 30 ENSGT00940000157636 ENSGT00940000158573 ENSGT00940000157747 ENSGT00940000159507 ENSGT00390000017592 ENSGT00940000164307 ENSGT00940000159293 ENSGT00940000157972 ENSGT00910000146651.a ENSGT00940000154303.A.b ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b.rb.x ENSGT00940000154172.gb.a #22 ENSGT00950000183157.a.a.b.x ENSGT00510000048032 ENSGT00940000161875.c.a ENSGT00390000004713.c ENSGT00940000159899 ENSGT00940000155381.s ENSGT00940000154173.A.a.c.a.a ENSGT00940000154303.B ENSGT00940000162728 ENSGT00940000156663.B ENSGT00390000011370 ENSGT00910000146965 ENSGT00920000149163 ENSGT00940000157625.b ENSGT00390000004010.a.b.a Pan ANCESTRAL SPECIES 37 ENSGT00940000157636 ENSGT00940000158573 ENSGT00940000157747 ENSGT00940000159507 ENSGT00390000017592 ENSGT00940000159293 ENSGT00940000164307 ENSGT00940000157972 ENSGT00910000146651.a ENSGT00940000154303.A.b ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b.rb.x ENSGT00940000154172.gb.a #22 ENSGT00950000183157.a.a.b.x ENSGT00510000048032 ENSGT00940000161875.c.a ENSGT00390000004713.c ENSGT00940000159899 ENSGT00940000155381.s.a ENSGT00390000015826 ENSGT00840000130004 ENSGT00940000157605 ENSGT00940000154596.b ENSGT00940000155825 ENSGT00390000014156.c ENSGT00390000014547.c ENSGT00940000153500.a.a.k.b ENSGT00940000156486 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 608 ENSPTRG00000045496 #22 ENSPTRG00000049607 ENSPTRG00000048429 ENSPTRG00000049686 ENSPTRG00000049134 Chimpanzee MODERN SPECIES 20 AMZ1 (ENSPTRG00000018869) GNA12 (ENSPTRG00000018870) CARD11 (ENSPTRG00000018871) SDK1 (ENSPTRG00000018872) FOXK1 (ENSPTRG00000018875) AP5Z1 (ENSPTRG00000018876) RADIL (ENSPTRG00000018877) PAPOLB (ENSPTRG00000045383) MMD2 (ENSPTRG00000018878) RBAK (ENSPTRG00000018880) WIPI2 (ENSPTRG00000018882) SLC29A4 (ENSPTRG00000018884) TNRC18 (ENSPTRG00000018886) FBXL18 (ENSPTRG00000018889) ACTB (ENSPTRG00000018890) ENSPTRG00000052762 #22 FSCN1 (ENSPTRG00000018892) RNF216 (ENSPTRG00000018894) OCM (ENSPTRG00000018896) ENSPTRG00000048336 ENSPTRG00000051187 ENSPTRG00000018920 ENSPTRG00000018919 ENSPTRG00000043578 ENSPTRG00000051819 RAC1 (ENSPTRG00000018910) ENSPTRG00000028666 CYTH3 (ENSPTRG00000018907) USP42 (ENSPTRG00000018906) EIF2AK1 (ENSPTRG00000018904) ANKRD61 (ENSPTRG00000018905) Bonobo MODERN SPECIES 20 AMZ1 (ENSPPAG00000031882) ENSPPAG00000020471 CARD11 (ENSPPAG00000035064) SDK1 (ENSPPAG00000033371) FOXK1 (ENSPPAG00000017436) AP5Z1 (ENSPPAG00000034107) RADIL (ENSPPAG00000041551) MMD2 (ENSPPAG00000042041) ENSPPAG00000028399 RBAK (ENSPPAG00000012357) WIPI2 (ENSPPAG00000035034) SLC29A4 (ENSPPAG00000038957) ENSPPAG00000040010 FBXL18 (ENSPPAG00000027621) ACTB (ENSPPAG00000037371) ENSPPAG00000033354 #22 ENSPPAG00000041475 RNF216 (ENSPPAG00000032864) ENSPPAG00000033714 PMS2 (ENSPPAG00000014830) AIMP2 (ENSPPAG00000035344) EIF2AK1 (ENSPPAG00000038784) ANKRD61 (ENSPPAG00000042004) USP42 (ENSPPAG00000029844) CYTH3 (ENSPPAG00000032310) ENSPPAG00000042160 ENSPPAG00000032857 DAGLB (ENSPPAG00000031293) ENSPPAG00000038445 GRID2IP (ENSPPAG00000004060) ZDHHC4 (ENSPPAG00000030859) Gorilla MODERN SPECIES 20 AMZ1 (ENSGGOG00000002895) GNA12 (ENSGGOG00000009488) CARD11 (ENSGGOG00000000988) SDK1 (ENSGGOG00000012912) ENSGGOG00000002679 AP5Z1 (ENSGGOG00000037780) RADIL (ENSGGOG00000002691) MMD2 (ENSGGOG00000012091) ENSGGOG00000027654 RBAK (ENSGGOG00000008465) WIPI2 (ENSGGOG00000006240) ENSGGOG00000011862 TNRC18 (ENSGGOG00000011875) FBXL18 (ENSGGOG00000014037) ACTB (ENSGGOG00000001133) ENSGGOG00000025778 #22 FSCN1 (ENSGGOG00000025593) RNF216 (ENSGGOG00000042353) ENSGGOG00000009068 ENSGGOG00000027454 ENSGGOG00000038387 PMS2 (ENSGGOG00000007960) AIMP2 (ENSGGOG00000007974) EIF2AK1 (ENSGGOG00000016216) ANKRD61 (ENSGGOG00000016229) USP42 (ENSGGOG00000015369) CYTH3 (ENSGGOG00000015376) FAM220A (ENSGGOG00000003262) RAC1 (ENSGGOG00000026733) DAGLB (ENSGGOG00000003364) KDELR2 (ENSGGOG00000042815) Gibbon MODERN SPECIES 7 BRAT1 (ENSNLEG00000010655) AMZ1 (ENSNLEG00000010620) GNA12 (ENSNLEG00000033618) CARD11 (ENSNLEG00000010543) ENSNLEG00000015435 ENSNLEG00000015459 AP5Z1 (ENSNLEG00000015462) RADIL (ENSNLEG00000015475) MMD2 (ENSNLEG00000015480) ENSNLEG00000036049 RBAK (ENSNLEG00000030817) WIPI2 (ENSNLEG00000015492) ENSNLEG00000027537 ENSNLEG00000031210 ACTB (ENSNLEG00000015506) ENSNLEG00000027252 #22 ENSNLEG00000028647 RNF216 (ENSNLEG00000015530) ENSNLEG00000026665 ENSNLEG00000015579 ENSNLEG00000036045 ENSNLEG00000036079 ZNF12 (ENSNLEG00000027354) ENSNLEG00000015596 INTS15 (ENSNLEG00000015599) ZDHHC4 (ENSNLEG00000015607) GRID2IP (ENSNLEG00000015646) KDELR2 (ENSNLEG00000015662) DAGLB (ENSNLEG00000015668) ENSNLEG00000015697 ENSNLEG00000001188 Cercopithecidae ANCESTRAL SPECIES 35 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b.rb.v ENSGT00940000154172.gb.a #22 ENSGT00950000183157.a.a.b ENSGT00910000147936 ENSGT00510000048032 ENSGT00940000154303.A.b ENSGT00940000154173.A.a.c.a ENSGT00940000157972 ENSGT00940000159293 ENSGT00390000017592 ENSGT00940000159507 ENSGT00940000157747 ENSGT00940000158573 ENSGT00940000157636 ENSGT00530000063996.b ENSGT00390000017551 ENSGT00940000156018.B Rhinopithecus ANCESTRAL SPECIES 37 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00390000015369 ENSGT00950000182894.D ENSGT00390000012030.a ENSGT00940000155256 ENSGT00940000158568 ENSGT00940000158729 ENSGT00390000012738 ENSGT00390000001867 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b.rb.v ENSGT00940000154172.gb.a #22 ENSGT00940000157613 ENSGT00940000159550 ENSGT00940000156221 ENSGT00940000157337 ENSGT00940000162386 ENSGT00940000154325.b ENSGT00650000093733 ENSGT00940000159513 ENSGT00390000009435 ENSGT00390000002480 ENSGT01030000234513.A.a.a.a.b.b ENSGT00390000017672 ENSGT00940000162735 ENSGT00940000159768 ENSGT00940000161580 Golden snub-nosed monkey MODERN SPECIES 1306 WIPI2 (ENSRROG00000038055) SLC29A4 (ENSRROG00000034000) TNRC18 (ENSRROG00000038945) ENSRROG00000028698 ENSRROG00000041256 #22 FSCN1 (ENSRROG00000032418) ENSRROG00000031470 Cercopithecinae ANCESTRAL SPECIES 24 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b.rb.v ENSGT00940000154172.gb.a #22 ENSGT00950000183157.a.a.b ENSGT00910000147936 ENSGT00510000048032 ENSGT00940000154303.A.b ENSGT00940000154173.A.a.c.a ENSGT00940000157972 ENSGT00940000159293 ENSGT00390000017592 ENSGT00940000159507 ENSGT00940000157747 ENSGT00940000158573 ENSGT00940000157636 ENSGT00530000063996.b ENSGT00390000017551 ENSGT00940000156018.B Vervet Monkey MODERN SPECIES 20 CARD11 (ENSCSAG00000017626) ENSCSAG00000017629 SDK1 (ENSCSAG00000017635) FOXK1 (ENSCSAG00000017639) AP5Z1 (ENSCSAG00000017641) RADIL (ENSCSAG00000017644) MMD2 (ENSCSAG00000017648) ENSCSAG00000017650 RBAK (ENSCSAG00000017653) WIPI2 (ENSCSAG00000017655) SLC29A4 (ENSCSAG00000017657) TNRC18 (ENSCSAG00000017667) FBXL18 (ENSCSAG00000017668) ENSCSAG00000017671 ENSCSAG00000017672 ENSCSAG00000019494 #22 FSCN1 (ENSCSAG00000017673) RNF216 (ENSCSAG00000017676) ENSCSAG00000017677 ZNF12 (ENSCSAG00000017682) ENSCSAG00000017688 ZNF316 (ENSCSAG00000017690) ZNF853 (ENSCSAG00000017691) INTS15 (ENSCSAG00000017692) ZDHHC4 (ENSCSAG00000017695) GRID2IP (ENSCSAG00000017697) KDELR2 (ENSCSAG00000017700) DAGLB (ENSCSAG00000017706) RAC1 (ENSCSAG00000017712) FAM220A (ENSCSAG00000019493) CYTH3 (ENSCSAG00000017714) Platyrrhini ANCESTRAL SPECIES 12 ENSGT00940000166289 ENSGT00940000164168 ENSGT00950000183312 ENSGT00950000183278 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a.b #22 ENSGT00940000154172.gb.a #22 ENSGT00940000154197.a.a #23 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000160649 #36 Cebidae ANCESTRAL SPECIES 12 ENSGT00940000166289 ENSGT00940000163248.c ENSGT00940000164168 ENSGT00950000183312 ENSGT00950000183278 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a.b #22 ENSGT00940000154172.gb.a #22 ENSGT00940000154197.a.a #23 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000160649 #36 Cebidae_a ANCESTRAL SPECIES 6 ENSGT00940000164092 ENSGT00910000148549 ENSGT00940000163248.c ENSGT00940000164168 ENSGT00950000183312 ENSGT00950000183278 ENSGT00950000183301 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a.b #22 ENSGT00940000154172.gb.a #22 ENSGT00940000154197.a.a #23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 Bolivian squirrel monkey MODERN SPECIES 194 ENSSBOG00000034477 S100A12 (ENSSBOG00000030134) S100A9 (ENSSBOG00000031384) PGLYRP4 (ENSSBOG00000024082) PGLYRP3 (ENSSBOG00000032598) SPRR3 (ENSSBOG00000011388) SPRR5 (ENSSBOG00000035155) LCE1A (ENSSBOG00000023695) ENSSBOG00000035924 ENSSBOG00000024630 C1orf68 (ENSSBOG00000032379) LCE5A (ENSSBOG00000022733) CRNN (ENSSBOG00000023767) #16 ENSSBOG00000034501 #17 TCHHL1 (ENSSBOG00000026405) #21 ENSSBOG00000030591 #22 ENSSBOG00000026767 #23 ENSSBOG00000019139 THEM4 (ENSSBOG00000035386) #24 RORC (ENSSBOG00000022092) #26 LINGO4 (ENSSBOG00000004029) #27 TDRKH (ENSSBOG00000034454) #28 OAZ3 (ENSSBOG00000028594) #29 MRPL9 (ENSSBOG00000018541) #30 RIIAD1 (ENSSBOG00000035260) #31 CELF3 (ENSSBOG00000021984) #32 SNX27 (ENSSBOG00000030853) #33 ENSSBOG00000013368 TUFT1 (ENSSBOG00000026491) #34 ENSSBOG00000004474 #35 ENSSBOG00000030486 Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES 8 ENSGT01090000263307 ENSGT00940000161842.b ENSGT00940000163498.a #15 ENSGT00940000165404 ENSGT00940000163498.b #15 ENSGT00940000163905 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.a #22 Cebidae DUPLICATION Cebidae ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.a.a #22 Cebidae_a DUPLICATION Cebidae_a ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.a.a.a #22 Capuchin MODERN SPECIES 56 YWHAZ (ENSCCAG00000037757) ENSCCAG00000031187 #22 ZNF706 (ENSCCAG00000030190) SIRT5 (ENSCCAG00000019021) GRHL2 (ENSCCAG00000022767) NCALD (ENSCCAG00000026748) ENSCCAG00000025833 ENSCCAG00000008235 RRM2B (ENSCCAG00000022244) UBR5 (ENSCCAG00000037120) ENSCCAG00000031229 ODF1 (ENSCCAG00000035817) KLF10 (ENSCCAG00000033474) AZIN1 (ENSCCAG00000032476) ATP6V1C1 (ENSCCAG00000027772) BAALC (ENSCCAG00000028012) FZD6 (ENSCCAG00000037830) Bolivian squirrel monkey MODERN SPECIES 52 ENSSBOG00000021974 SRP54 (ENSSBOG00000035145) PPP2R3C (ENSSBOG00000021567) PRORP (ENSSBOG00000024149) ENSSBOG00000031078 ENSSBOG00000010550 NFKBIA (ENSSBOG00000022575) INSM2 (ENSSBOG00000020749) RALGAPA1 (ENSSBOG00000030376) ENSSBOG00000026566 ENSSBOG00000003699 ENSSBOG00000023045 MBIP (ENSSBOG00000026011) ENSSBOG00000026399 NKX2-1 (ENSSBOG00000031780) ENSSBOG00000032187 #22 NKX2-8 (ENSSBOG00000021640) PAX9 (ENSSBOG00000032402) SLC25A21 (ENSSBOG00000031959) MIPOL1 (ENSSBOG00000031785) FOXA1 (ENSSBOG00000033644) ENSSBOG00000022608 ENSSBOG00000022130 TTC6 (ENSSBOG00000002810) SSTR1 (ENSSBOG00000019308) ENSSBOG00000033407 Cebidae_a ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.a.a.b #22 Bolivian squirrel monkey MODERN SPECIES 57 FST (ENSSBOG00000024064) ENSSBOG00000012144 MOCS2 (ENSSBOG00000023924) ITGA2 (ENSSBOG00000026323) ITGA1 (ENSSBOG00000035784) ENSSBOG00000005354 PELO (ENSSBOG00000036140) ISL1 (ENSSBOG00000029572) PARP8 (ENSSBOG00000026196) ENSSBOG00000022889 EMB (ENSSBOG00000031770) HCN1 (ENSSBOG00000032652) ENSSBOG00000033279 ENSSBOG00000030359 MRPS30 (ENSSBOG00000034220) ENSSBOG00000035921 #22 FGF10 (ENSSBOG00000019373) NNT (ENSSBOG00000032175) PAIP1 (ENSSBOG00000024593) C5orf34 (ENSSBOG00000031040) TMEM267 (ENSSBOG00000032412) ENSSBOG00000011299 CCL28 (ENSSBOG00000029489) HMGCS1 (ENSSBOG00000020825) NIM1K (ENSSBOG00000024438) ENSSBOG00000006819 ZNF131 (ENSSBOG00000021812) CCDC152 (ENSSBOG00000025815) ENSSBOG00000029186 GHR (ENSSBOG00000026257) ENSSBOG00000024904 Capuchin MODERN SPECIES 230 CYP2C19 (ENSCCAG00000022588) ENSCCAG00000027055 CYP2C8 (ENSCCAG00000016338) PLCE1 (ENSCCAG00000002880) NOC3L (ENSCCAG00000021365) TBC1D12 (ENSCCAG00000022141) ENSCCAG00000023460 ENSCCAG00000014729 HELLS (ENSCCAG00000026761) ENSCCAG00000024415 TMEM132C (ENSCCAG00000019552) ENSCCAG00000021367 #22 ENSCCAG00000024430 Cebidae ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.a.b #22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.a.b #22 Bolivian squirrel monkey MODERN SPECIES 86 TBX21 (ENSSBOG00000028744) OSBPL7 (ENSSBOG00000033435) MRPL10 (ENSSBOG00000004214) LRRC46 (ENSSBOG00000026980) SCRN2 (ENSSBOG00000027391) SP6 (ENSSBOG00000014210) SP2 (ENSSBOG00000029098) PNPO (ENSSBOG00000021213) PRR15L (ENSSBOG00000019240) CDK5RAP3 (ENSSBOG00000033272) COPZ2 (ENSSBOG00000033633) NFE2L1 (ENSSBOG00000023867) ENSSBOG00000031880 SNX11 (ENSSBOG00000026967) SKAP1 (ENSSBOG00000029434) ENSSBOG00000019520 #22 HOXB1 (ENSSBOG00000034875) HOXB2 (ENSSBOG00000025070) HOXB3 (ENSSBOG00000030844) HOXB4 (ENSSBOG00000024432) HOXB5 (ENSSBOG00000018198) HOXB6 (ENSSBOG00000031900) HOXB7 (ENSSBOG00000020028) HOXB8 (ENSSBOG00000034884) HOXB9 (ENSSBOG00000030218) ENSSBOG00000030794 PRAC2 (ENSSBOG00000032603) HOXB13 (ENSSBOG00000029964) TTLL6 (ENSSBOG00000028908) CALCOCO2 (ENSSBOG00000035276) ENSSBOG00000028794 Marmoset MODERN SPECIES 78 ENSCJAG00000044335 CHIC1 (ENSCJAG00000016436) CDX4 (ENSCJAG00000011367) ENSCJAG00000070896 ENSCJAG00000073630 ENSCJAG00000071801 ENSCJAG00000084463 ENSCJAG00000074437 ENSCJAG00000081881 ENSCJAG00000073913 ENSCJAG00000069950 ENSCJAG00000079778 ENSCJAG00000000229 PHKA1 (ENSCJAG00000004244) HDAC8 (ENSCJAG00000004217) ENSCJAG00000081431 #22 ENSCJAG00000058709 CITED1 (ENSCJAG00000004200) RPS4X (ENSCJAG00000004192) ERCC6L (ENSCJAG00000022332) ENSCJAG00000074350 ENSCJAG00000004992 RTL5 (ENSCJAG00000064303) NHSL2 (ENSCJAG00000005012) ENSCJAG00000084928 ENSCJAG00000086496 ENSCJAG00000032034 ENSCJAG00000032793 CXCR3 (ENSCJAG00000006395) ENSCJAG00000031514 OGT (ENSCJAG00000013308) Platyrrhini ANCESTRAL SPECIES 12 ENSGT00780000122937 ENSGT00940000166289 ENSGT00940000164168 ENSGT00950000183312 ENSGT00950000183278 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a.b #22 ENSGT00940000154172.gb.a #22 ENSGT00940000154197.a.a #23 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B Mas night monkey MODERN SPECIES 1075 ENSANAG00000024945 ENSANAG00000005707 #22 MOBP (ENSANAG00000022691) MYRIP (ENSANAG00000022468) EIF1B (ENSANAG00000026979) ENTPD3 (ENSANAG00000008467) ENSANAG00000027465 ZNF619 (ENSANAG00000036106) ZNF620 (ENSANAG00000033621) ZNF621 (ENSANAG00000025534) CTNNB1 (ENSANAG00000033807) ULK4 (ENSANAG00000032735) TRAK1 (ENSANAG00000032745) CCK (ENSANAG00000030129) LYZL4 (ENSANAG00000000908) VIPR1 (ENSANAG00000033723) SEC22C (ENSANAG00000033275) Cebidae ANCESTRAL SPECIES 12 ENSGT00780000122937 ENSGT00940000166289 ENSGT00940000163248.c ENSGT00940000164168 ENSGT00950000183312 ENSGT00950000183278 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a.b #22 ENSGT00940000154172.gb.a #22 ENSGT00940000154197.a.a #23 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B Marmoset DUPLICATION Marmoset DUPLICATION Marmoset DUPLICATION Marmoset MODERN SPECIES 9 ENSCJAG00000021128 ENSCJAG00000063584 ENSCJAG00000076233 ENSCJAG00000086813 ENSCJAG00000077758 ENSCJAG00000039629 #15 ENSCJAG00000044588 ENSCJAG00000082018 ENSCJAG00000079985 ENSCJAG00000069815 ENSCJAG00000069309 ENSCJAG00000038526 CRCT1 (ENSCJAG00000048030) ENSCJAG00000055685 TCHHL1 (ENSCJAG00000006396) #21 ENSCJAG00000075085 #22 ENSCJAG00000084819 ENSCJAG00000054491 LCE6A (ENSCJAG00000087033) LCE7A (ENSCJAG00000052117) SPRR4 (ENSCJAG00000039910) ENSCJAG00000083489 SPRR3 (ENSCJAG00000079053) ENSCJAG00000072829 ENSCJAG00000082383 LELP1 (ENSCJAG00000022918) PRR9 (ENSCJAG00000022917) PGLYRP3 (ENSCJAG00000036601) PGLYRP4 (ENSCJAG00000005866) S100A9 (ENSCJAG00000071355) S100A12 (ENSCJAG00000071147) Marmoset MODERN SPECIES 16 EEF1A1 (ENSCJAG00000083200) ENSCJAG00000063026 MTO1 (ENSCJAG00000010003) CGAS (ENSCJAG00000009988) DDX43 (ENSCJAG00000009966) KHDC3L (ENSCJAG00000009947) ENSCJAG00000009945 ENSCJAG00000062698 ENSCJAG00000055378 KCNQ5 (ENSCJAG00000009916) ENSCJAG00000086119 RIMS1 (ENSCJAG00000009737) OGFRL1 (ENSCJAG00000003635) ENSCJAG00000066859 ENSCJAG00000059733 ENSCJAG00000077933 #22 B3GAT2 (ENSCJAG00000064513) SMAP1 (ENSCJAG00000003659) SDHAF4 (ENSCJAG00000003698) FAM135A (ENSCJAG00000003701) COL9A1 (ENSCJAG00000003767) COL19A1 (ENSCJAG00000003875) LMBRD1 (ENSCJAG00000004013) ENSCJAG00000083091 ENSCJAG00000080063 ENSCJAG00000080901 ENSCJAG00000081259 ADGRB3 (ENSCJAG00000004137) ENSCJAG00000085446 ENSCJAG00000083894 EYS (ENSCJAG00000031425) Marmoset MODERN SPECIES 78 TXLNG (ENSCJAG00000038897) RBBP7 (ENSCJAG00000004545) ENSCJAG00000084845 REPS2 (ENSCJAG00000004607) ENSCJAG00000080054 NHS (ENSCJAG00000004660) ENSCJAG00000078610 ENSCJAG00000082727 ENSCJAG00000023313 RAI2 (ENSCJAG00000003685) SCML2 (ENSCJAG00000005875) CDKL5 (ENSCJAG00000005834) RS1 (ENSCJAG00000005829) PPEF1 (ENSCJAG00000005798) PHKA2 (ENSCJAG00000005668) ENSCJAG00000082522 #22 ADGRG2 (ENSCJAG00000005571) ENSCJAG00000072791 ENSCJAG00000073410 ENSCJAG00000005496 ENSCJAG00000005459 BCLAF3 (ENSCJAG00000045691) ENSCJAG00000022320 ENSCJAG00000079762 MAP7D2 (ENSCJAG00000005383) RPS6KA3 (ENSCJAG00000005239) ENSCJAG00000005365 ENSCJAG00000073658 CNKSR2 (ENSCJAG00000005220) KLHL34 (ENSCJAG00000041270) SMPX (ENSCJAG00000005203) Marmoset MODERN SPECIES 5 DNAJC5G (ENSCJAG00000001112) SLC30A3 (ENSCJAG00000001114) CAD (ENSCJAG00000001126) ATRAID (ENSCJAG00000001170) SLC5A6 (ENSCJAG00000001184) TCF23 (ENSCJAG00000001198) PREB (ENSCJAG00000001207) ABHD1 (ENSCJAG00000001229) KHK (ENSCJAG00000001241) EMILIN1 (ENSCJAG00000001258) OST4 (ENSCJAG00000047403) AGBL5 (ENSCJAG00000001279) TMEM214 (ENSCJAG00000001317) MAPRE3 (ENSCJAG00000001341) DPYSL5 (ENSCJAG00000001352) ENSCJAG00000075557 #22 CENPA (ENSCJAG00000058840) SLC35F6 (ENSCJAG00000071257) KCNK3 (ENSCJAG00000052158) CIB4 (ENSCJAG00000001393) FAM166C (ENSCJAG00000001406) OTOF (ENSCJAG00000001409) DRC1 (ENSCJAG00000001461) ENSCJAG00000086527 SELENOI (ENSCJAG00000001477) ADGRF3 (ENSCJAG00000001491) KIF3C (ENSCJAG00000008138) RAB10 (ENSCJAG00000056072) ENSCJAG00000070963 GAREM2 (ENSCJAG00000008091) HADHA (ENSCJAG00000008008) Cebidae_a ANCESTRAL SPECIES 6 ENSGT00940000162657 ENSGT00940000164092 ENSGT00910000148549 ENSGT00940000163248.c ENSGT00940000164168 ENSGT00950000183312 ENSGT00950000183278 ENSGT00950000183301 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a.b #22 ENSGT00940000154172.gb.a #22 ENSGT00940000154197.a.a #23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Capuchin DUPLICATION Capuchin MODERN SPECIES 789 ENSCCAG00000028496 C1orf68 (ENSCCAG00000033093) ENSCCAG00000032021 LCE5A (ENSCCAG00000023210) CRNN (ENSCCAG00000022242) #16 ENSCCAG00000022070 #17 ENSCCAG00000021495 #20 TCHHL1 (ENSCCAG00000020927) #21 ENSCCAG00000005854 #22 Capuchin MODERN SPECIES 12 TTR (ENSCCAG00000029921) DSG2 (ENSCCAG00000027262) DSG3 (ENSCCAG00000020345) DSG4 (ENSCCAG00000022744) DSG1 (ENSCCAG00000035455) DSC1 (ENSCCAG00000016167) DSC2 (ENSCCAG00000034283) DSC3 (ENSCCAG00000037410) ENSCCAG00000031616 ENSCCAG00000028020 ENSCCAG00000021923 ENSCCAG00000037382 ENSCCAG00000035350 CDH2 (ENSCCAG00000021037) CHST9 (ENSCCAG00000020066) ENSCCAG00000018909 #22 AQP4 (ENSCCAG00000021505) ENSCCAG00000018132 KCTD1 (ENSCCAG00000033186) ENSCCAG00000005936 ENSCCAG00000037563 TAF4B (ENSCCAG00000033480) PSMA8 (ENSCCAG00000035292) SS18 (ENSCCAG00000021245) ENSCCAG00000020450 ZNF521 (ENSCCAG00000029899) HRH4 (ENSCCAG00000032343) IMPACT (ENSCCAG00000036594) OSBPL1A (ENSCCAG00000032012) ENSCCAG00000021797 TTC39C (ENSCCAG00000025379) Capuchin MODERN SPECIES 87 GPATCH3 (ENSCCAG00000030482) NR0B2 (ENSCCAG00000030627) NUDC (ENSCCAG00000033425) KDF1 (ENSCCAG00000015434) ENSCCAG00000020074 ENSCCAG00000028136 TENT5B (ENSCCAG00000036493) SLC9A1 (ENSCCAG00000026782) WDTC1 (ENSCCAG00000026157) SYTL1 (ENSCCAG00000024708) MAP3K6 (ENSCCAG00000019188) FCN3 (ENSCCAG00000022265) CD164L2 (ENSCCAG00000023007) GPR3 (ENSCCAG00000000295) WASF2 (ENSCCAG00000033324) ENSCCAG00000019701 #22 AHDC1 (ENSCCAG00000019652) FGR (ENSCCAG00000026723) IFI6 (ENSCCAG00000033587) FAM76A (ENSCCAG00000032340) ENSCCAG00000031655 STX12 (ENSCCAG00000023253) PPP1R8 (ENSCCAG00000025347) THEMIS2 (ENSCCAG00000035270) RPA2 (ENSCCAG00000025366) SMPDL3B (ENSCCAG00000023858) XKR8 (ENSCCAG00000033700) EYA3 (ENSCCAG00000024843) ENSCCAG00000027313 DNAJC8 (ENSCCAG00000026898) ATP5IF1 (ENSCCAG00000037499) Catarrhini ANCESTRAL SPECIES 10 ENSGT00940000161842.b.c ENSGT00940000161842.b.d ENSGT00940000163498.a #15 ENSGT00940000165404 ENSGT00940000163498.b #15 ENSGT00940000163905 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Cercopithecidae DUPLICATION Cercopithecidae ANCESTRAL SPECIES 22 ENSGT00940000161842.b.c ENSGT00940000161842.b.d ENSGT00940000163498.a #15 ENSGT00940000165404 ENSGT00940000163498.b #15 ENSGT00940000163905 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a.c #22 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.a ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 Rhinopithecus ANCESTRAL SPECIES 23 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a.c #22 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.a ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 1209 APCDD1L (ENSRROG00000029255) VAPB (ENSRROG00000035212) RAB22A (ENSRROG00000043562) ENSRROG00000038763 ANKRD60 (ENSRROG00000044987) C20orf85 (ENSRROG00000025741) ENSRROG00000042357 PMEPA1 (ENSRROG00000033199) ZBP1 (ENSRROG00000038526) PCK1 (ENSRROG00000040117) CTCFL (ENSRROG00000032938) ENSRROG00000034125 RAE1 (ENSRROG00000044550) SPO11 (ENSRROG00000039862) BMP7 (ENSRROG00000008373) ENSRROG00000012900 #22 TFAP2C (ENSRROG00000040883) Golden snub-nosed monkey MODERN SPECIES 2622 ENSRROG00000036104 #22 ENSRROG00000031960 ENSRROG00000041423 ##23 THEM4 (ENSRROG00000028759) #24 THEM5 (ENSRROG00000042268) #25 RORC (ENSRROG00000040819) #26 LINGO4 (ENSRROG00000011588) #27 TDRKH (ENSRROG00000036923) #28 OAZ3 (ENSRROG00000038133) #29 MRPL9 (ENSRROG00000031111) #30 RIIAD1 (ENSRROG00000045557) #31 CELF3 (ENSRROG00000044979) #32 SNX27 (ENSRROG00000032485) #33 TUFT1 (ENSRROG00000040599) #34 ENSRROG00000028411 #35 POGZ (ENSRROG00000032667) #36 Black snub-nosed monkey MODERN SPECIES 590 RPTN (ENSRBIG00000030933) #19 ENSRBIG00000033037 TCHHL1 (ENSRBIG00000043220) #21 ENSRBIG00000041931 #22 ENSRBIG00000034058 ENSRBIG00000036151 ##23 THEM4 (ENSRBIG00000031977) #24 THEM5 (ENSRBIG00000028002) #25 RORC (ENSRBIG00000031354) #26 LINGO4 (ENSRBIG00000026745) #27 TDRKH (ENSRBIG00000044860) #28 OAZ3 (ENSRBIG00000032011) #29 MRPL9 (ENSRBIG00000036937) #30 RIIAD1 (ENSRBIG00000036425) #31 CELF3 (ENSRBIG00000043205) #32 SNX27 (ENSRBIG00000043969) #33 TUFT1 (ENSRBIG00000022910) #34 ENSRBIG00000017870 #35 POGZ (ENSRBIG00000044811) #36 Cercopithecinae DUPLICATION Cercopithecinae ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.c.c #22 Cercopithecinae_a DUPLICATION Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00390000000155.b ENSGT00390000009405.b.c.a.a.d.b.b.a.a.b.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT00940000153112.D.n.a.a.a.a.a.a.a.b ENSGT01050000244838.D ENSGT00940000154172.gb.b.a.c.c.a #22 ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ENSGT00390000012588 ENSGT00930000150941.y ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.j Macaca ANCESTRAL SPECIES 9 ENSGT00950000183068.b ENSGT00390000000155.b ENSGT00390000009405.b.c.a.a.d.b.b.a.a.b.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00940000153112.D.n.a.a.a.a.a.a.a.b ENSGT01050000244838.D ENSGT00940000154172.gb.b.a.c.c.a #22 ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ENSGT00390000012588 ENSGT00930000150941.y ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.j Pig-tailed macaque MODERN SPECIES 240 ENSMNEG00000038234 #22 SH3BGRL2 (ENSMNEG00000014423) LCA5 (ENSMNEG00000022073) HMGN3 (ENSMNEG00000036715) ENSMNEG00000036602 PHIP (ENSMNEG00000040852) IRAK1BP1 (ENSMNEG00000030912) ENSMNEG00000028187 MEI4 (ENSMNEG00000008925) HTR1B (ENSMNEG00000037775) Macaca_a ANCESTRAL SPECIES 9 ENSGT00950000183068.b ENSGT00390000000155.b ENSGT00390000009405.b.c.a.a.d.b.b.a.a.b.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000164709.a.b.b.a.b.a.a.a.a.a.b.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000154172.gb.b.a.c.c.a #22 ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ENSGT00390000012588 ENSGT00390000013856 ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.b.b.b.b ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.j ENSGT00940000154923.C Crab-eating macaque MODERN SPECIES 14 PRSS35 (ENSMFAG00000030491) ENSMFAG00000029344 ME1 (ENSMFAG00000038582) RWDD2A (ENSMFAG00000056949) PGM3 (ENSMFAG00000035703) DOP1A (ENSMFAG00000031960) UBE3D (ENSMFAG00000034654) TPBG (ENSMFAG00000010683) ENSMFAG00000057579 IBTK (ENSMFAG00000034378) TENT5A (ENSMFAG00000063328) ENSMFAG00000055696 BCKDHB (ENSMFAG00000040052) TTK (ENSMFAG00000032875) ELOVL4 (ENSMFAG00000036147) ENSMFAG00000029021 #22 SH3BGRL2 (ENSMFAG00000064741) LCA5 (ENSMFAG00000000256) HMGN3 (ENSMFAG00000032893) PHIP (ENSMFAG00000039797) IRAK1BP1 (ENSMFAG00000033220) ENSMFAG00000050638 MEI4 (ENSMFAG00000009582) ENSMFAG00000057040 HTR1B (ENSMFAG00000042700) IMPG1 (ENSMFAG00000033339) MYO6 (ENSMFAG00000038795) ENSMFAG00000041950 FILIP1 (ENSMFAG00000001452) TMEM30A (ENSMFAG00000036109) COX7A2 (ENSMFAG00000046193) Cercopithecinae_b ANCESTRAL SPECIES 17 ENSGT00390000000155.b ENSGT00390000009405.b.c.a.a.d.b.b.a.a.b.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT00940000153112.D.n.a.a.a.a.a.a.a.b ENSGT01050000244838.D ENSGT00940000154172.gb.b.a.c.c.a #22 ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00390000000903.a.f.b.a ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.j Olive baboon MODERN SPECIES 16 ENSPANG00000050132 ENSPANG00000038747 ENSPANG00000037360 ME1 (ENSPANG00000024033) RWDD2A (ENSPANG00000024174) PGM3 (ENSPANG00000020093) DOP1A (ENSPANG00000007248) UBE3D (ENSPANG00000018937) ENSPANG00000049310 TPBG (ENSPANG00000004548) IBTK (ENSPANG00000016793) TENT5A (ENSPANG00000021880) BCKDHB (ENSPANG00000020540) TTK (ENSPANG00000000257) ELOVL4 (ENSPANG00000018200) ENSPANG00000003825 #22 SH3BGRL2 (ENSPANG00000007514) LCA5 (ENSPANG00000022607) ENSPANG00000048815 HMGN3 (ENSPANG00000015740) PHIP (ENSPANG00000022800) IRAK1BP1 (ENSPANG00000022608) ENSPANG00000044429 ENSPANG00000038045 ENSPANG00000046954 MEI4 (ENSPANG00000034147) ENSPANG00000051429 HTR1B (ENSPANG00000015604) IMPG1 (ENSPANG00000019906) MYO6 (ENSPANG00000019225) SENP6 (ENSPANG00000036022) Cercopithecinae_d ANCESTRAL SPECIES 125 ENSGT00390000000155.b ENSGT00390000009405.b.c.a.a.d.b.b.a.a.b.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT00940000153112.D.n.a.a.a.a.a.a.a.b ENSGT01050000244838.D ENSGT00940000154172.gb.b.a.c.c.a #22 ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00390000000903.a.f.b.a ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.j Sooty mangabey MODERN SPECIES 128 PRSS35 (ENSCATG00000020462) ENSCATG00000020427 ME1 (ENSCATG00000031861) RWDD2A (ENSCATG00000038601) PGM3 (ENSCATG00000042665) DOP1A (ENSCATG00000034338) UBE3D (ENSCATG00000040671) TPBG (ENSCATG00000017655) IBTK (ENSCATG00000044268) TENT5A (ENSCATG00000044344) BCKDHB (ENSCATG00000032837) ENSCATG00000041525 TTK (ENSCATG00000030166) ENSCATG00000029983 ELOVL4 (ENSCATG00000035594) ENSCATG00000014117 #22 SH3BGRL2 (ENSCATG00000002364) LCA5 (ENSCATG00000023865) HMGN3 (ENSCATG00000032172) ENSCATG00000031954 PHIP (ENSCATG00000027002) IRAK1BP1 (ENSCATG00000028937) ENSCATG00000043967 MEI4 (ENSCATG00000044930) HTR1B (ENSCATG00000017608) IMPG1 (ENSCATG00000042380) MYO6 (ENSCATG00000041301) SENP6 (ENSCATG00000039823) ENSCATG00000029705 ENSCATG00000014790 FILIP1 (ENSCATG00000029962) Drill MODERN SPECIES 1619 BCKDHB (ENSMLEG00000039932) TTK (ENSMLEG00000030533) ENSMLEG00000040597 ELOVL4 (ENSMLEG00000038234) ENSMLEG00000028069 #22 SH3BGRL2 (ENSMLEG00000035831) LCA5 (ENSMLEG00000033736) Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.c.c.b #22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.c.c.b #22 Olive baboon MODERN SPECIES ENSPANG00000039422 ENSPANG00000040624 ENSPANG00000039755 LCE3A (ENSPANG00000037695) #15 LCE3B (ENSPANG00000048883) LCE3C (ENSPANG00000043674) #15 ENSPANG00000041574 ENSPANG00000001479 ENSPANG00000039437 CRCT1 (ENSPANG00000011659) LCE5A (ENSPANG00000018957) CRNN (ENSPANG00000009153) #16 RPTN (ENSPANG00000030992) #19 ENSPANG00000043243 #20 TCHHL1 (ENSPANG00000034098) #21 ENSPANG00000041696 #22 ENSPANG00000007245 S100A10 (ENSPANG00000032390) ##23 THEM4 (ENSPANG00000009760) #24 THEM5 (ENSPANG00000033870) #25 C2CD4D (ENSPANG00000002233) RORC (ENSPANG00000020758) #26 LINGO4 (ENSPANG00000007807) #27 TDRKH (ENSPANG00000001986) #28 OAZ3 (ENSPANG00000011815) #29 MRPL9 (ENSPANG00000008737) #30 RIIAD1 (ENSPANG00000015348) #31 CELF3 (ENSPANG00000023526) #32 SNX27 (ENSPANG00000020431) #33 TUFT1 (ENSPANG00000003699) #34 CGN (ENSPANG00000011379) Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.c.c.b #22 Sooty mangabey MODERN SPECIES 582 TRHDE (ENSCATG00000005594) ENSCATG00000033580 ATXN7L3B (ENSCATG00000002045) KCNC2 (ENSCATG00000034752) CAPS2 (ENSCATG00000044038) GLIPR1L1 (ENSCATG00000035838) GLIPR1L2 (ENSCATG00000032595) GLIPR1 (ENSCATG00000007700) KRR1 (ENSCATG00000038219) ENSCATG00000040362 ENSCATG00000010102 NAP1L1 (ENSCATG00000032285) ENSCATG00000039964 BBS10 (ENSCATG00000042101) OSBPL8 (ENSCATG00000036635) ENSCATG00000005498 #22 ENSCATG00000039522 ENSCATG00000044128 ZDHHC17 (ENSCATG00000040479) CSRP2 (ENSCATG00000040566) E2F7 (ENSCATG00000035481) NAV3 (ENSCATG00000032040) ENSCATG00000017337 ENSCATG00000040529 ENSCATG00000044466 SYT1 (ENSCATG00000033541) PAWR (ENSCATG00000034935) PPP1R12A (ENSCATG00000038278) OTOGL (ENSCATG00000038125) PTPRQ (ENSCATG00000039610) MYF6 (ENSCATG00000029151) Vervet Monkey MODERN SPECIES 7 COL1A1 (ENSCSAG00000005310) SGCA (ENSCSAG00000005231) PPP1R9B (ENSCSAG00000005228) SAMD14 (ENSCSAG00000005224) PDK2 (ENSCSAG00000005211) ITGA3 (ENSCSAG00000005208) DLX3 (ENSCSAG00000005198) DLX4 (ENSCSAG00000005195) TAC4 (ENSCSAG00000005188) KAT7 (ENSCSAG00000005187) TMC8 (ENSCSAG00000005185) TMC6 (ENSCSAG00000005174) TNRC6C (ENSCSAG00000005167) SEPTIN9 (ENSCSAG00000005146) SEC14L1 (ENSCSAG00000005133) ENSCSAG00000000541 #22 MGAT5B (ENSCSAG00000005125) MFSD11 (ENSCSAG00000005118) SRSF2 (ENSCSAG00000005108) METTL23 (ENSCSAG00000005104) JMJD6 (ENSCSAG00000005101) MXRA7 (ENSCSAG00000005097) ST6GALNAC1 (ENSCSAG00000005094) ST6GALNAC2 (ENSCSAG00000005091) PRCD (ENSCSAG00000005085) CYGB (ENSCSAG00000005082) RHBDF2 (ENSCSAG00000005067) AANAT (ENSCSAG00000005051) UBE2O (ENSCSAG00000005047) SPHK1 (ENSCSAG00000005041) PRPSAP1 (ENSCSAG00000005033) Cercopithecinae ANCESTRAL SPECIES ENSGT00940000161842.b.d ENSGT00940000163498.a #15 ENSGT00940000165404 ENSGT00940000163498.b #15 ENSGT00940000163905.u ENSGT00940000163905.v ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a.c.d #22 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.a ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00730000111580 ENSGT00940000161842.b.c ENSGT00940000161842.b.d.c ENSGT00940000161842.b.d.d ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00390000014753.l.b ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a.c.d #22 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.a ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 Macaca DUPLICATION Macaca ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.c.d.a #22 Macaca_a ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.c.d.a #22 Rhesus DUPLICATION Rhesus MODERN SPECIES ENSMMUG00000056940 ENSMMUG00000055266 KPRP (ENSMMUG00000051816) ENSMMUG00000049843 ENSMMUG00000049286 ENSMMUG00000050804 CRCT1 (ENSMMUG00000058456) LCE5A (ENSMMUG00000001967) CRNN (ENSMMUG00000009040) #16 FLG2 (ENSMMUG00000059472) #17 ENSMMUG00000054850 RPTN (ENSMMUG00000019033) #19 TCHH (ENSMMUG00000056263) TCHHL1 (ENSMMUG00000020209) #21 ENSMMUG00000045342 ENSMMUG00000004441 #22 ENSMMUG00000042487 S100A10 (ENSMMUG00000052533) ##23 THEM4 (ENSMMUG00000014361) #25 C2CD4D (ENSMMUG00000014358) RORC (ENSMMUG00000012138) #26 LINGO4 (ENSMMUG00000012137) #27 TDRKH (ENSMMUG00000009096) #28 OAZ3 (ENSMMUG00000009095) #29 MRPL9 (ENSMMUG00000009094) #30 RIIAD1 (ENSMMUG00000016955) #31 CELF3 (ENSMMUG00000016952) #32 SNX27 (ENSMMUG00000016920) #33 TUFT1 (ENSMMUG00000021260) #34 CGN (ENSMMUG00000021259) #35 POGZ (ENSMMUG00000020925) #36 Rhesus MODERN SPECIES 17 CHD2 (ENSMMUG00000011782) ENSMMUG00000060896 FAM174B (ENSMMUG00000054786) ST8SIA2 (ENSMMUG00000013814) SLCO3A1 (ENSMMUG00000001740) SV2B (ENSMMUG00000008399) ENSMMUG00000042330 ENSMMUG00000011326 PRC1 (ENSMMUG00000007534) RCCD1 (ENSMMUG00000005108) UNC45A (ENSMMUG00000005106) HDDC3 (ENSMMUG00000062217) MAN2A2 (ENSMMUG00000005103) FES (ENSMMUG00000004659) FURIN (ENSMMUG00000004657) S100A11 (ENSMMUG00000056402) #22 BLM (ENSMMUG00000019526) CRTC3 (ENSMMUG00000008886) ENSMMUG00000065122 IQGAP1 (ENSMMUG00000011882) ZNF774 (ENSMMUG00000050794) ENSMMUG00000060326 NGRN (ENSMMUG00000057144) TTLL13 (ENSMMUG00000054144) GDPGP1 (ENSMMUG00000029504) CIB1 (ENSMMUG00000004376) SEMA4B (ENSMMUG00000023816) IDH2 (ENSMMUG00000014833) ENSMMUG00000014831 AP3S2 (ENSMMUG00000029507) ANPEP (ENSMMUG00000014983) Macaca DUPLICATION Macaca ANCESTRAL SPECIES 95 ENSGT00940000154172.gb.b.a.c.d.b.a #22 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.a Pig-tailed macaque MODERN SPECIES 262 LCE1A (ENSMNEG00000028072) ENSMNEG00000025567 C1orf68 (ENSMNEG00000033043) ENSMNEG00000035302 ENSMNEG00000033860 ENSMNEG00000023573 CRCT1 (ENSMNEG00000021397) LCE5A (ENSMNEG00000027973) CRNN (ENSMNEG00000041303) #16 FLG2 (ENSMNEG00000042232) #17 RPTN (ENSMNEG00000031148) #19 ENSMNEG00000032914 TCHH (ENSMNEG00000033147) TCHHL1 (ENSMNEG00000030875) #21 ENSMNEG00000032093 ENSMNEG00000032935 #22 ENSMNEG00000041444 S100A10 (ENSMNEG00000033842) ##23 ENSMNEG00000044777 #24 THEM5 (ENSMNEG00000040359) #25 C2CD4D (ENSMNEG00000020684) RORC (ENSMNEG00000041238) #26 LINGO4 (ENSMNEG00000028221) #27 TDRKH (ENSMNEG00000021524) #28 OAZ3 (ENSMNEG00000043875) #29 MRPL9 (ENSMNEG00000020504) #30 RIIAD1 (ENSMNEG00000033990) #31 CELF3 (ENSMNEG00000044120) #32 SNX27 (ENSMNEG00000033985) #33 TUFT1 (ENSMNEG00000040638) #34 ENSMNEG00000029723 #35 Macaca_a ANCESTRAL SPECIES 86 ENSGT00940000154172.gb.b.a.c.d.b.a #22 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.a Crab-eating macaque MODERN SPECIES ENSMFAG00000055625 ENSMFAG00000013553 ENSMFAG00000058045 KPRP (ENSMFAG00000065755) ENSMFAG00000054616 ENSMFAG00000020533 LCE5A (ENSMFAG00000030064) CRNN (ENSMFAG00000039664) #16 ENSMFAG00000037107 #17 FLG (ENSMFAG00000052909) #18 HRNR (ENSMFAG00000047345) ##19 RPTN (ENSMFAG00000054571) #19 ENSMFAG00000049602 #20 TCHHL1 (ENSMFAG00000065203) #21 ENSMFAG00000053564 ENSMFAG00000051097 #22 ENSMFAG00000049673 S100A10 (ENSMFAG00000044914) ##23 THEM4 (ENSMFAG00000032182) #24 RORC (ENSMFAG00000000807) #26 LINGO4 (ENSMFAG00000029272) #27 TDRKH (ENSMFAG00000041641) #28 OAZ3 (ENSMFAG00000000682) #29 MRPL9 (ENSMFAG00000000874) #30 RIIAD1 (ENSMFAG00000042291) #31 CELF3 (ENSMFAG00000040182) #32 SNX27 (ENSMFAG00000030490) #33 TUFT1 (ENSMFAG00000034076) #34 ENSMFAG00000003431 #35 POGZ (ENSMFAG00000043596) #36 ENSMFAG00000054881 Macaca ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.c.d.b.b #22 Pig-tailed macaque MODERN SPECIES 131 ENSMNEG00000027094 ENSMNEG00000021455 NAV2 (ENSMNEG00000043339) ENSMNEG00000045165 E2F8 (ENSMNEG00000040013) CSRP3 (ENSMNEG00000033382) ZDHHC13 (ENSMNEG00000037030) PTPN5 (ENSMNEG00000032650) IGSF22 (ENSMNEG00000035177) TMEM86A (ENSMNEG00000041047) SPTY2D1 (ENSMNEG00000038544) ENSMNEG00000044112 UEVLD (ENSMNEG00000034421) TSG101 (ENSMNEG00000041853) LDHAL6A (ENSMNEG00000041126) ENSMNEG00000024949 #22 LDHC (ENSMNEG00000033782) ENSMNEG00000042413 GTF2H1 (ENSMNEG00000036878) ENSMNEG00000042089 HPS5 (ENSMNEG00000030883) SAA2 (ENSMNEG00000041389) SAA4 (ENSMNEG00000043404) ENSMNEG00000035570 SAAL1 (ENSMNEG00000021954) TPH1 (ENSMNEG00000028667) SERGEF (ENSMNEG00000043939) KCNC1 (ENSMNEG00000029034) MYOD1 (ENSMNEG00000044032) OTOG (ENSMNEG00000040832) USH1C (ENSMNEG00000012077) Macaca_a ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.c.d.b.b #22 Crab-eating macaque MODERN SPECIES 5 ZDHHC13 (ENSMFAG00000044093) MRGPRX2 (ENSMFAG00000053055) ENSMFAG00000058700 MRGPRX1 (ENSMFAG00000061091) PTPN5 (ENSMFAG00000034300) IGSF22 (ENSMFAG00000000462) TMEM86A (ENSMFAG00000060167) SPTY2D1 (ENSMFAG00000044194) ENSMFAG00000001697 ENSMFAG00000051133 ENSMFAG00000000553 TSG101 (ENSMFAG00000032321) ENSMFAG00000058819 LDHAL6A (ENSMFAG00000050157) LDHC (ENSMFAG00000003940) ENSMFAG00000027126 #22 ENSMFAG00000054002 GTF2H1 (ENSMFAG00000032995) HPS5 (ENSMFAG00000044104) ENSMFAG00000025977 SAA2 (ENSMFAG00000044536) SAA4 (ENSMFAG00000038106) MRGPRX4 (ENSMFAG00000056317) MRGPRX3 (ENSMFAG00000052090) SAAL1 (ENSMFAG00000037334) ENSMFAG00000065213 SERGEF (ENSMFAG00000000777) KCNC1 (ENSMFAG00000002367) MYOD1 (ENSMFAG00000039430) OTOG (ENSMFAG00000001197) USH1C (ENSMFAG00000000184) Cercopithecinae_b ANCESTRAL SPECIES 3 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.b.c ENSGT00940000161842.b.d.c ENSGT00940000161842.b.d.d ENSGT00940000163905.v ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00390000014753.l.b ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a.c.d #22 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.a ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B Cercopithecinae_d ANCESTRAL SPECIES 29 ENSGT00940000164092 ENSGT00730000111626 ENSGT00950000183312 ENSGT00950000183278 ENSGT00730000111580 ENSGT00940000161842.b.d.d ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.a #19 ENSGT00390000014753.l.b ENSGT00940000164620 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a.c.d #22 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.a ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B Drill MODERN SPECIES 411 FLG2 (ENSMLEG00000029025) #17 ENSMLEG00000036412 #20 TCHHL1 (ENSMLEG00000042735) #21 ENSMLEG00000030945 #22 ENSMLEG00000036504 S100A10 (ENSMLEG00000010423) ##23 THEM4 (ENSMLEG00000041867) #24 THEM5 (ENSMLEG00000037664) #25 RORC (ENSMLEG00000041292) #26 LINGO4 (ENSMLEG00000000178) #27 TDRKH (ENSMLEG00000033882) #28 OAZ3 (ENSMLEG00000035369) #29 MRPL9 (ENSMLEG00000043239) #30 RIIAD1 (ENSMLEG00000040504) #31 CELF3 (ENSMLEG00000028006) #32 SNX27 (ENSMLEG00000036793) #33 TUFT1 (ENSMLEG00000036430) #34 ENSMLEG00000042702 #35 POGZ (ENSMLEG00000031084) #36 Sooty mangabey MODERN SPECIES 153 SPRR1B (ENSCATG00000003043) SPRR3 (ENSCATG00000012343) SPRR4 (ENSCATG00000002632) LCE1A (ENSCATG00000017623) ENSCATG00000017677 C1orf68 (ENSCATG00000044855) ENSCATG00000017507 CRCT1 (ENSCATG00000016190) LCE5A (ENSCATG00000017297) CRNN (ENSCATG00000019973) #16 FLG2 (ENSCATG00000044861) #17 RPTN (ENSCATG00000033282) #19 ENSCATG00000008029 TCHH (ENSCATG00000039707) TCHHL1 (ENSCATG00000039351) #21 ENSCATG00000033220 #22 ENSCATG00000029227 ENSCATG00000038312 ##23 THEM4 (ENSCATG00000032487) #24 THEM5 (ENSCATG00000044867) #25 C2CD4D (ENSCATG00000002143) RORC (ENSCATG00000034157) #26 LINGO4 (ENSCATG00000021085) #27 TDRKH (ENSCATG00000041878) #28 OAZ3 (ENSCATG00000014157) #29 MRPL9 (ENSCATG00000043909) #30 RIIAD1 (ENSCATG00000021062) #31 CELF3 (ENSCATG00000030846) #32 SNX27 (ENSCATG00000034009) #33 TUFT1 (ENSCATG00000037719) #34 CGN (ENSCATG00000031118) Cercopithecidae ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.d #22 Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00530000063596.A ENSGT00950000183001.a.b.b ENSGT00390000011204 ENSGT00900000143808 ENSGT00940000163665 ENSGT00390000017581.b ENSGT00940000159390 ENSGT00940000156807 ENSGT00940000160774 ENSGT01090000259985.b.b.a.b ENSGT01090000259985.b.b.a.a ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.b.a.a ENSGT01090000259985.b.a.b.a.b ENSGT01090000259985.b.b.b.a.a.b ENSGT00940000154172.gb.b.a.d #22 ENSGT00940000155063 ENSGT01050000244879.b.a.a ENSGT00390000005914.b ENSGT00940000161020 ENSGT00390000006356 ENSGT00940000158977 ENSGT00950000183030.m.a.a.a.b ENSGT00940000160744 ENSGT00940000154295.y.b.a.b ENSGT00510000049213 ENSGT00940000154639.n.b ENSGT00940000157128 ENSGT00440000033329.b.a.a ENSGT00950000182974.a.a.a.b ENSGT00940000156374 Cercopithecinae_a ANCESTRAL SPECIES 17 ENSGT00390000011204 ENSGT00900000143808 ENSGT00940000163665 ENSGT00940000153112.D.n.a.a.b.b ENSGT00390000017581.b ENSGT00940000159390 ENSGT00940000156807 ENSGT00940000160774 ENSGT01090000259985.b.b.a.b ENSGT01090000259985.b.b.a.a ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.b.a.a ENSGT01090000259985.b.a.b.a.b ENSGT01090000259985.b.b.b.a.a.b ENSGT00940000155063 ENSGT00940000154172.gb.b.a.d #22 ENSGT01050000244879.b.a.a ENSGT00390000005914.b ENSGT00940000161020 ENSGT00390000006356 ENSGT00940000158977 ENSGT00950000183030.m.a.a.a.b ENSGT00940000160744 ENSGT00940000154295.y.b.a.b ENSGT00510000049213 ENSGT00940000154639.n.b ENSGT00940000157128 ENSGT00440000033329.b.a.a ENSGT00950000182974.a.a.a.b ENSGT00390000018085.a.a.b.f.b.b ENSGT00940000156374 Macaca ANCESTRAL SPECIES 28 ENSGT00950000183001.a.b.b ENSGT00390000011204 ENSGT00900000143808 ENSGT00940000153112.D.n.a.a.b.b ENSGT00390000017581.b ENSGT00940000159390 ENSGT00940000156807 ENSGT00940000160774 ENSGT01090000259985.b.b.a.b ENSGT01090000259985.b.b.a.a ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.b.a.a ENSGT01090000259985.b.a.b.a.b ENSGT01090000259985.b.b.b.a.a.b ENSGT00940000155063 ENSGT00940000154172.gb.b.a.d #22 ENSGT01050000244879.b.a.a ENSGT00390000005914.b ENSGT00940000161020 ENSGT00390000006356 ENSGT00940000158977 ENSGT00950000183030.m.a.a.a.b ENSGT00940000160744 ENSGT00940000154295.y.b.a.b.c ENSGT00510000049213 ENSGT00940000154639.n.b ENSGT00940000157128 ENSGT00440000033329.b.a.a ENSGT00950000182974.a.a.a.b ENSGT00390000018085.a.a.b.f.b.b ENSGT00940000156374 Macaca_a ANCESTRAL SPECIES 15 ENSGT00390000007488 ENSGT00530000063596.A ENSGT00950000183001.a.b.b ENSGT00390000011204 ENSGT00900000143808 ENSGT00390000017581.b ENSGT00940000159390 ENSGT00940000156807 ENSGT00940000160774 ENSGT01090000259985.b.b.a.b ENSGT01090000259985.b.b.a.a ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.b.a.a ENSGT01090000259985.b.a.b.a.b ENSGT01090000259985.b.b.b.a.a.b ENSGT00940000154172.gb.b.a.d #22 ENSGT00940000155063 ENSGT00980000202165.D ENSGT01050000244879.b.a.a ENSGT00390000005914.b ENSGT00940000161020 ENSGT00390000006356 ENSGT00940000158977 ENSGT00950000183030.m.a.a.a.b ENSGT00940000160744 ENSGT00940000154295.y.b.a.b.c ENSGT00510000049213 ENSGT00940000157128 ENSGT00440000033329.b.a.a ENSGT00950000182974.a.a.a.b ENSGT00940000156374 Crab-eating macaque MODERN SPECIES 4 ENSMFAG00000061226 ENSMFAG00000055851 ENSMFAG00000048377 ENSMFAG00000057295 ENSMFAG00000060850 TMEM182 (ENSMFAG00000036897) MFSD9 (ENSMFAG00000042016) SLC9A2 (ENSMFAG00000045336) SLC9A4 (ENSMFAG00000044816) IL18RAP (ENSMFAG00000043038) IL18R1 (ENSMFAG00000032671) IL1RL1 (ENSMFAG00000007059) IL1RL2 (ENSMFAG00000046248) IL1R1 (ENSMFAG00000034258) IL1R2 (ENSMFAG00000046196) ENSMFAG00000015955 #22 MAP4K4 (ENSMFAG00000030642) ENSMFAG00000052713 RFX8 (ENSMFAG00000034469) CREG2 (ENSMFAG00000043737) RNF149 (ENSMFAG00000038019) CNOT11 (ENSMFAG00000044449) TBC1D8 (ENSMFAG00000004006) ENSMFAG00000044593 NPAS2 (ENSMFAG00000001513) ENSMFAG00000002115 NMS (ENSMFAG00000035510) CHST10 (ENSMFAG00000043113) LONRF2 (ENSMFAG00000041273) ENSMFAG00000057183 AFF3 (ENSMFAG00000031640) Pig-tailed macaque MODERN SPECIES 165 TGFBRAP1 (ENSMNEG00000033724) GPR45 (ENSMNEG00000008661) MRPS9 (ENSMNEG00000034038) ENSMNEG00000013615 ENSMNEG00000043182 TMEM182 (ENSMNEG00000000448) MFSD9 (ENSMNEG00000029233) SLC9A2 (ENSMNEG00000044315) SLC9A4 (ENSMNEG00000043901) IL18RAP (ENSMNEG00000037581) IL18R1 (ENSMNEG00000042412) ENSMNEG00000033211 IL1RL2 (ENSMNEG00000031150) IL1R1 (ENSMNEG00000029507) IL1R2 (ENSMNEG00000035660) ENSMNEG00000018515 #22 MAP4K4 (ENSMNEG00000033335) RFX8 (ENSMNEG00000035104) CREG2 (ENSMNEG00000032081) RNF149 (ENSMNEG00000044718) CNOT11 (ENSMNEG00000044355) TBC1D8 (ENSMNEG00000006766) ENSMNEG00000042370 NPAS2 (ENSMNEG00000034450) ENSMNEG00000035390 NMS (ENSMNEG00000038064) ENSMNEG00000036571 CHST10 (ENSMNEG00000043033) LONRF2 (ENSMNEG00000039849) AFF3 (ENSMNEG00000031770) ENSMNEG00000026095 Cercopithecinae_b ANCESTRAL SPECIES 40 ENSGT00390000011204 ENSGT00900000143808 ENSGT00940000163665 ENSGT00940000153112.D.n.a.a.b.b ENSGT00390000017581.b ENSGT00940000159390 ENSGT00940000156807 ENSGT00940000160774 ENSGT01090000259985.b.b.a.b ENSGT01090000259985.b.b.a.a ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.b.a.a ENSGT01090000259985.b.a.b.a.b ENSGT01090000259985.b.b.b.a.a.b ENSGT00940000155063 ENSGT00940000154172.gb.b.a.d #22 ENSGT01050000244879.b.a.a ENSGT00390000005914.b ENSGT00940000161020 ENSGT00390000006356 ENSGT00940000158977 ENSGT00950000183030.m.a.a.a.b ENSGT00940000160744 ENSGT00940000154295.y.b.a.b ENSGT00510000049213 ENSGT00940000154639.n.b ENSGT00940000157128 ENSGT00440000033329.b.a.a ENSGT00950000182974.a.a.a.b ENSGT00390000018085.a.a.b.f.b.b ENSGT00940000156374 Olive baboon MODERN SPECIES 5 MRPS9 (ENSPANG00000012691) POU3F3 (ENSPANG00000048187) ENSPANG00000041304 ENSPANG00000051105 TMEM182 (ENSPANG00000040836) MFSD9 (ENSPANG00000022366) SLC9A2 (ENSPANG00000024442) SLC9A4 (ENSPANG00000019901) IL18RAP (ENSPANG00000007109) IL18R1 (ENSPANG00000025952) IL1RL1 (ENSPANG00000008055) IL1RL2 (ENSPANG00000016467) IL1R1 (ENSPANG00000008056) IL1R2 (ENSPANG00000008628) MAP4K4 (ENSPANG00000016468) ENSPANG00000033346 #22 ENSPANG00000046709 ENSPANG00000041623 ENSPANG00000019556 RFX8 (ENSPANG00000008935) CREG2 (ENSPANG00000008057) RNF149 (ENSPANG00000024716) CNOT11 (ENSPANG00000023665) ENSPANG00000050706 TBC1D8 (ENSPANG00000022369) ENSPANG00000031625 NPAS2 (ENSPANG00000000546) ENSPANG00000007110 ENSPANG00000049213 NMS (ENSPANG00000024717) CHST10 (ENSPANG00000019542) Cercopithecinae_d ANCESTRAL SPECIES 74 ENSGT00390000011204 ENSGT00900000143808 ENSGT00940000163665 ENSGT00940000153112.D.n.a.a.b.b ENSGT00390000017581.b ENSGT00940000159390 ENSGT00940000156807 ENSGT00940000160774 ENSGT01090000259985.b.b.a.b ENSGT01090000259985.b.b.a.a ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.b.a.a ENSGT01090000259985.b.a.b.a.b ENSGT01090000259985.b.b.b.a.a.b ENSGT00940000155063 ENSGT00940000154172.gb.b.a.d #22 ENSGT01050000244879.b.a.a ENSGT00390000005914.b ENSGT00940000161020 ENSGT00390000006356 ENSGT00940000158977 ENSGT00950000183030.m.a.a.a.b ENSGT00940000160744 ENSGT00940000154295.y.b.a.b ENSGT00510000049213 ENSGT00940000154639.n.b ENSGT00940000157128 ENSGT00440000033329.b.a.a ENSGT00950000182974.a.a.a.b ENSGT00390000018085.a.a.b.f.b.b ENSGT00940000156374 Sooty mangabey MODERN SPECIES 622 MRPS9 (ENSCATG00000036678) ENSCATG00000005418 POU3F3 (ENSCATG00000043149) ENSCATG00000042784 TMEM182 (ENSCATG00000034912) MFSD9 (ENSCATG00000031408) SLC9A2 (ENSCATG00000037196) SLC9A4 (ENSCATG00000034216) IL18RAP (ENSCATG00000041182) IL18R1 (ENSCATG00000032165) IL1RL1 (ENSCATG00000033298) IL1RL2 (ENSCATG00000044212) IL1R1 (ENSCATG00000044046) IL1R2 (ENSCATG00000045357) MAP4K4 (ENSCATG00000043377) ENSCATG00000014556 #22 RFX8 (ENSCATG00000034271) CREG2 (ENSCATG00000042933) RNF149 (ENSCATG00000032784) CNOT11 (ENSCATG00000040259) TBC1D8 (ENSCATG00000040426) ENSCATG00000032919 NPAS2 (ENSCATG00000031061) ENSCATG00000030865 NMS (ENSCATG00000029654) ENSCATG00000045280 CHST10 (ENSCATG00000036687) LONRF2 (ENSCATG00000030877) AFF3 (ENSCATG00000045196) ENSCATG00000040341 REV1 (ENSCATG00000043738) Vervet Monkey MODERN SPECIES 5 TGFBRAP1 (ENSCSAG00000017075) GPR45 (ENSCSAG00000019430) MRPS9 (ENSCSAG00000017079) POU3F3 (ENSCSAG00000019429) TMEM182 (ENSCSAG00000017082) MFSD9 (ENSCSAG00000017085) SLC9A2 (ENSCSAG00000017090) SLC9A4 (ENSCSAG00000017094) IL18RAP (ENSCSAG00000017102) IL18R1 (ENSCSAG00000017115) IL1RL1 (ENSCSAG00000017123) IL1RL2 (ENSCSAG00000017133) IL1R1 (ENSCSAG00000017139) ENSCSAG00000017144 IL1R2 (ENSCSAG00000017148) ENSCSAG00000019428 #22 MAP4K4 (ENSCSAG00000017152) RFX8 (ENSCSAG00000017155) CREG2 (ENSCSAG00000017159) RNF149 (ENSCSAG00000017163) CNOT11 (ENSCSAG00000017167) TBC1D8 (ENSCSAG00000017170) NPAS2 (ENSCSAG00000017176) ENSCSAG00000017183 CHST10 (ENSCSAG00000017188) LONRF2 (ENSCSAG00000017190) AFF3 (ENSCSAG00000017193) REV1 (ENSCSAG00000017200) EIF5B (ENSCSAG00000017209) TXNDC9 (ENSCSAG00000017212) LYG1 (ENSCSAG00000017213) Rhinopithecus ANCESTRAL SPECIES ENSGT00940000154172.gb.b.a.d #22 Black snub-nosed monkey MODERN SPECIES 1132 ENSRBIG00000031565 UBE2E1 (ENSRBIG00000034290) NKIRAS1 (ENSRBIG00000027456) ENSRBIG00000033415 NR1D2 (ENSRBIG00000032612) THRB (ENSRBIG00000012599) ENSRBIG00000038731 #22 ENSRBIG00000023439 RARB (ENSRBIG00000029659) TOP2B (ENSRBIG00000023441) NGLY1 (ENSRBIG00000008998) OXSM (ENSRBIG00000033144) Hominoidea ANCESTRAL SPECIES 7 ENSGT00940000163498.a #15 ENSGT00940000165404 ENSGT00940000163498.b #15 ENSGT00940000163905 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000164915 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000164620 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047.s #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Hominidae ANCESTRAL SPECIES 6 ENSGT00940000163498.a #15 ENSGT00940000165404 ENSGT00940000163498.b #15 ENSGT00940000163905 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000164915 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000164620 ENSGT00940000163983.b #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047.s #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Orangutan MODERN SPECIES LCE2C (ENSPPYG00000038194) LCE2B (ENSPPYG00000038561) LCE3A (ENSPPYG00000000838) #15 LCE3B (ENSPPYG00000039034) LCE3C (ENSPPYG00000000839) #15 ENSPPYG00000034690 ENSPPYG00000037350 CRCT1 (ENSPPYG00000000842) LCE5A (ENSPPYG00000000843) CRNN (ENSPPYG00000000844) #16 ENSPPYG00000000845 #17 ENSPPYG00000040029 #18 ENSPPYG00000000847 ##19 ENSPPYG00000032510 #20 TCHHL1 (ENSPPYG00000034079) #21 ENSPPYG00000000848 #22 ENSPPYG00000000850 ##23 THEM4 (ENSPPYG00000000851) #24 THEM5 (ENSPPYG00000000852) #25 C2CD4D (ENSPPYG00000029725) RORC (ENSPPYG00000000853) #26 LINGO4 (ENSPPYG00000000854) #27 TDRKH (ENSPPYG00000000855) #28 OAZ3 (ENSPPYG00000000856) #29 MRPL9 (ENSPPYG00000000857) #30 ENSPPYG00000000858 #31 CELF3 (ENSPPYG00000000859) #32 SNX27 (ENSPPYG00000000860) #33 TUFT1 (ENSPPYG00000000861) #34 ENSPPYG00000000862 #35 POGZ (ENSPPYG00000000864) #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 6 ENSGT00940000163498.b #15 ENSGT00940000163905 ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000164915 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00390000014753.l.b ENSGT00910000147236.b ENSGT00940000164620 ENSGT00940000163983.b #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047.s #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Gorilla MODERN SPECIES ENSGGOG00000001539 LCE2C (ENSGGOG00000041860) LCE2D (ENSGGOG00000039821) LCE3B (ENSGGOG00000002199) ENSGGOG00000023986 LCE5A (ENSGGOG00000025178) CRNN (ENSGGOG00000023574) #16 ENSGGOG00000024846 ENSGGOG00000008451 #17 ENSGGOG00000001834 ##19 ENSGGOG00000004511 #19 ENSGGOG00000036337 ENSGGOG00000043419 ENSGGOG00000027117 TCHHL1 (ENSGGOG00000012074) #21 S100A11 (ENSGGOG00000008680) #22 ENSGGOG00000025421 ##23 THEM4 (ENSGGOG00000008114) #24 THEM5 (ENSGGOG00000002230) #25 C2CD4D (ENSGGOG00000028484) RORC (ENSGGOG00000002223) #26 LINGO4 (ENSGGOG00000004487) #27 TDRKH (ENSGGOG00000025419) #28 OAZ3 (ENSGGOG00000001904) #29 MRPL9 (ENSGGOG00000001902) #30 ENSGGOG00000003583 #31 CELF3 (ENSGGOG00000021973) #32 ENSGGOG00000023049 #32 SNX27 (ENSGGOG00000034898) #33 ENSGGOG00000026173 TUFT1 (ENSGGOG00000007971) #34 Homo/Pan group ANCESTRAL SPECIES 7 ENSGT00940000165404 ENSGT00940000163498.b #15 ENSGT00940000163905.q ENSGT00940000163905.r ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000164915 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000164620 ENSGT00940000163983.b #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047.s #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Pan ANCESTRAL SPECIES ENSGT00940000163498.b #15 ENSGT00940000163905.q ENSGT00940000163905.r ENSGT00730000113097 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000164915 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00390000014753.l.b ENSGT00910000147236.b ENSGT00940000163983.b #20 ENSGT00940000162966 #21 ENSGT00940000154172.gb.b.a #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047.s #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Bonobo MODERN SPECIES LCE2D (ENSPPAG00000008205) LCE3A (ENSPPAG00000014043) #15 LCE3B (ENSPPAG00000023046) LCE3C (ENSPPAG00000013471) #15 LCE3D (ENSPPAG00000019158) LCE3E (ENSPPAG00000024570) CRCT1 (ENSPPAG00000010532) LCE5A (ENSPPAG00000036794) ENSPPAG00000014413 ENSPPAG00000041801 #19 ENSPPAG00000038158 ENSPPAG00000034752 ENSPPAG00000042806 #20 TCHHL1 (ENSPPAG00000042692) #21 ENSPPAG00000039848 S100A11 (ENSPPAG00000030540) #22 S100A10 (ENSPPAG00000037637) ##23 THEM4 (ENSPPAG00000035727) #24 THEM5 (ENSPPAG00000030756) #25 RORC (ENSPPAG00000027120) #26 LINGO4 (ENSPPAG00000017350) #27 TDRKH (ENSPPAG00000028994) #28 OAZ3 (ENSPPAG00000013394) #29 MRPL9 (ENSPPAG00000016172) #30 ENSPPAG00000028387 #31 CELF3 (ENSPPAG00000038551) #32 SNX27 (ENSPPAG00000043259) #33 TUFT1 (ENSPPAG00000038447) #34 ENSPPAG00000041669 #35 POGZ (ENSPPAG00000029740) #36 PSMB4 (ENSPPAG00000029520) Chimpanzee MODERN SPECIES LCE3C (ENSPTRG00000001319) #15 LCE3D (ENSPTRG00000043930) LCE3E (ENSPTRG00000049653) CRCT1 (ENSPTRG00000001316) LCE5A (ENSPTRG00000001315) CRNN (ENSPTRG00000001314) #16 ENSPTRG00000052403 FLG2 (ENSPTRG00000001313) #17 FLG (ENSPTRG00000001312) #18 HRNR (ENSPTRG00000044100) ##19 RPTN (ENSPTRG00000033880) #19 ENSPTRG00000052139 ENSPTRG00000049010 #20 ENSPTRG00000046417 #20 TCHHL1 (ENSPTRG00000001305) #21 S100A11 (ENSPTRG00000001303) #22 S100A10 (ENSPTRG00000001302) ##23 THEM4 (ENSPTRG00000001301) #24 THEM5 (ENSPTRG00000001300) #25 C2CD4D (ENSPTRG00000041010) RORC (ENSPTRG00000032436) #26 LINGO4 (ENSPTRG00000001298) #27 TDRKH (ENSPTRG00000001297) #28 OAZ3 (ENSPTRG00000001296) #29 MRPL9 (ENSPTRG00000001295) #30 RIIAD1 (ENSPTRG00000001294) #31 CELF3 (ENSPTRG00000001293) #32 SNX27 (ENSPTRG00000001292) #33 TUFT1 (ENSPTRG00000001291) #34 CGN (ENSPTRG00000022663) #35 POGZ (ENSPTRG00000001289) #36 Human MODERN SPECIES LCE2D (ENSG00000187223) LCE3A (ENSG00000185962) #15 LCE3B (ENSG00000187238) LCE3C (ENSG00000244057) #15 LCE3D (ENSG00000163202) LCE3E (ENSG00000185966) CRCT1 (ENSG00000169509) LCE5A (ENSG00000186207) CRNN (ENSG00000143536) #16 FLG2 (ENSG00000143520) #17 FLG (ENSG00000143631) #18 HRNR (ENSG00000197915) ##19 RPTN (ENSG00000215853) #19 TCHH (ENSG00000159450) TCHHL1 (ENSG00000182898) #21 S100A11 (ENSG00000163191) #22 S100A10 (ENSG00000197747) ##23 THEM4 (ENSG00000159445) #24 THEM5 (ENSG00000196407) #25 C2CD4D (ENSG00000225556) RORC (ENSG00000143365) #26 LINGO4 (ENSG00000213171) #27 TDRKH (ENSG00000182134) #28 OAZ3 (ENSG00000143450) #29 MRPL9 (ENSG00000143436) #30 RIIAD1 (ENSG00000178796) #31 CELF3 (ENSG00000159409) #32 SNX27 (ENSG00000143376) #33 TUFT1 (ENSG00000143367) #34 CGN (ENSG00000143375) POGZ (ENSG00000143442) #36 Gibbon DUPLICATION Gibbon MODERN SPECIES 2 LCE6A (ENSNLEG00000027340) ENSNLEG00000028803 LCE1F (ENSNLEG00000027468) KPRP (ENSNLEG00000010346) C1orf68 (ENSNLEG00000018283) ENSNLEG00000035077 ENSNLEG00000010339 CRCT1 (ENSNLEG00000028058) CRNN (ENSNLEG00000010331) #16 ENSNLEG00000010330 ENSNLEG00000030540 #17 ENSNLEG00000036121 #18 ENSNLEG00000030464 ##19 ENSNLEG00000010328 #19 TCHHL1 (ENSNLEG00000010326) #21 ENSNLEG00000010324 #22 THEM4 (ENSNLEG00000010322) #24 THEM5 (ENSNLEG00000010315) #25 C2CD4D (ENSNLEG00000010314) RORC (ENSNLEG00000010305) #26 LINGO4 (ENSNLEG00000010303) #27 TDRKH (ENSNLEG00000010284) #28 OAZ3 (ENSNLEG00000010280) #29 MRPL9 (ENSNLEG00000010275) #30 ENSNLEG00000010271 #31 CELF3 (ENSNLEG00000010255) #32 SNX27 (ENSNLEG00000010249) #33 TUFT1 (ENSNLEG00000010235) #34 ENSNLEG00000029006 CGN (ENSNLEG00000010229) POGZ (ENSNLEG00000010214) #36 Gibbon MODERN SPECIES 14 ENSNLEG00000027494 NUP35 (ENSNLEG00000035026) DUSP19 (ENSNLEG00000035662) ENSNLEG00000006419 NCKAP1 (ENSNLEG00000006378) FRZB (ENSNLEG00000006370) DNAJC10 (ENSNLEG00000006363) ENSNLEG00000032805 PDE1A (ENSNLEG00000006357) PPP1R1C (ENSNLEG00000032277) ITPRID2 (ENSNLEG00000006323) NEUROD1 (ENSNLEG00000033713) CERKL (ENSNLEG00000006310) ITGA4 (ENSNLEG00000006295) UBE2E3 (ENSNLEG00000006290) ENSNLEG00000018748 #22 CWC22 (ENSNLEG00000006248) ZNF385B (ENSNLEG00000006238) ENSNLEG00000032947 SESTD1 (ENSNLEG00000006220) ENSNLEG00000006205 ENSNLEG00000006175 ENSNLEG00000032978 ENSNLEG00000034742 PLEKHA3 (ENSNLEG00000006150) FKBP7 (ENSNLEG00000006149) PJVK (ENSNLEG00000006144) ENSNLEG00000006120 OSBPL6 (ENSNLEG00000006086) RBM45 (ENSNLEG00000006080) ENSNLEG00000030325 Simiiformes ANCESTRAL SPECIES ENSGT00940000154172.gb.b.b #22 Catarrhini ANCESTRAL SPECIES ENSGT00940000154172.gb.b.b #22 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000154172.gb.b.b #22 Rhinopithecus ANCESTRAL SPECIES ENSGT00940000154172.gb.b.b #22 Golden snub-nosed monkey MODERN SPECIES 930 ENSRROG00000043279 #22 TBX20 (ENSRROG00000039234) ENSRROG00000045635 HERPUD2 (ENSRROG00000029628) SEPTIN7 (ENSRROG00000041974) ENSRROG00000043427 EEPD1 (ENSRROG00000038238) MATCAP2 (ENSRROG00000033803) ANLN (ENSRROG00000044291) AOAH (ENSRROG00000029690) Platyrrhini DUPLICATION Platyrrhini DUPLICATION Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00940000154172.gb.b.b.a.a.a #22 Cebidae ANCESTRAL SPECIES ENSGT00940000154172.gb.b.b.a.a.a #22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000154172.gb.b.b.a.a.a #22 Bolivian squirrel monkey MODERN SPECIES 86 ENSSBOG00000010573 C17orf98 (ENSSBOG00000021261) PIP4K2B (ENSSBOG00000025107) ENSSBOG00000022909 PCGF2 (ENSSBOG00000032762) CISD3 (ENSSBOG00000036248) MLLT6 (ENSSBOG00000029198) SRCIN1 (ENSSBOG00000015321) ENSSBOG00000020882 ARHGAP23 (ENSSBOG00000017157) SOCS7 (ENSSBOG00000031544) GPR179 (ENSSBOG00000022698) MRPL45 (ENSSBOG00000028242) NPEPPS (ENSSBOG00000032725) KPNB1 (ENSSBOG00000030025) ENSSBOG00000014766 #22 ENSSBOG00000029189 TBX21 (ENSSBOG00000028744) OSBPL7 (ENSSBOG00000033435) MRPL10 (ENSSBOG00000004214) LRRC46 (ENSSBOG00000026980) SCRN2 (ENSSBOG00000027391) SP6 (ENSSBOG00000014210) SP2 (ENSSBOG00000029098) PNPO (ENSSBOG00000021213) PRR15L (ENSSBOG00000019240) CDK5RAP3 (ENSSBOG00000033272) COPZ2 (ENSSBOG00000033633) NFE2L1 (ENSSBOG00000023867) ENSSBOG00000031880 SNX11 (ENSSBOG00000026967) Mas night monkey MODERN SPECIES 375 ENSANAG00000015152 #22 TGFBR3 (ENSANAG00000007882) ENSANAG00000020685 CDC7 (ENSANAG00000020421) HFM1 (ENSANAG00000029513) ENSANAG00000031530 ZNF644 (ENSANAG00000026564) ENSANAG00000025420 Platyrrhini ANCESTRAL SPECIES ENSGT00940000154172.gb.b.b.a.a.b #22 Mas night monkey MODERN SPECIES 958 LYPLAL1 (ENSANAG00000025763) ENSANAG00000024112 TGFB2 (ENSANAG00000032505) ENSANAG00000019880 SPATA17 (ENSANAG00000017809) GPATCH2 (ENSANAG00000032851) ESRRG (ENSANAG00000021556) USH2A (ENSANAG00000024118) KCTD3 (ENSANAG00000028292) KCNK2 (ENSANAG00000027145) CENPF (ENSANAG00000023683) PTPN14 (ENSANAG00000024204) SMYD2 (ENSANAG00000028402) PROX1 (ENSANAG00000028544) RPS6KC1 (ENSANAG00000036580) ENSANAG00000017378 #22 ANGEL2 (ENSANAG00000029357) VASH2 (ENSANAG00000032216) FLVCR1 (ENSANAG00000029598) ENSANAG00000036696 TATDN3 (ENSANAG00000034556) NSL1 (ENSANAG00000034470) BATF3 (ENSANAG00000036250) ATF3 (ENSANAG00000037037) NENF (ENSANAG00000028745) PACC1 (ENSANAG00000035062) PPP2R5A (ENSANAG00000030090) DTL (ENSANAG00000034442) INTS7 (ENSANAG00000036266) ENSANAG00000016648 LPGAT1 (ENSANAG00000029780) Platyrrhini ANCESTRAL SPECIES ENSGT00940000154172.gb.b.b.a.b #22 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 784 RPTN (ENSANAG00000038262) #19 ENSANAG00000032085 #20 TCHHL1 (ENSANAG00000031283) #21 ENSANAG00000030118 #22 ENSANAG00000037832 ENSANAG00000027772 LCE1A (ENSANAG00000028061) ENSANAG00000025630 SPRR3 (ENSANAG00000036666) ENSANAG00000020214 C1orf68 (ENSANAG00000030607) ENSANAG00000029129 ENSANAG00000027666 ##23 THEM4 (ENSANAG00000023948) #24 THEM5 (ENSANAG00000016558) #25 RORC (ENSANAG00000029747) #26 LINGO4 (ENSANAG00000006067) #27 TDRKH (ENSANAG00000021663) #28 OAZ3 (ENSANAG00000023949) #29 Mas night monkey MODERN SPECIES 664 SLC28A2 (ENSANAG00000023299) SHF (ENSANAG00000013917) DUOX1 (ENSANAG00000026614) DUOXA1 (ENSANAG00000022362) DUOXA2 (ENSANAG00000000424) DUOX2 (ENSANAG00000023067) SORD (ENSANAG00000030942) TERB2 (ENSANAG00000025429) TRIM69 (ENSANAG00000035697) B2M (ENSANAG00000032555) ENSANAG00000030159 PATL2 (ENSANAG00000022701) SPG11 (ENSANAG00000034005) ENSANAG00000019682 CTDSPL2 (ENSANAG00000028613) ENSANAG00000018212 #22 GOLM2 (ENSANAG00000027081) ENSANAG00000010524 FRMD5 (ENSANAG00000020974) WDR76 (ENSANAG00000007845) MFAP1 (ENSANAG00000029657) HYPK (ENSANAG00000023281) SERINC4 (ENSANAG00000036538) ENSANAG00000028665 ENSANAG00000034308 ENSANAG00000026775 ELL3 (ENSANAG00000005795) ENSANAG00000019539 ENSANAG00000020927 STRC (ENSANAG00000032033) ENSANAG00000038373 Platyrrhini ANCESTRAL SPECIES ENSGT00940000154172.gb.b.b.b #22 Cebidae ANCESTRAL SPECIES 10 ENSGT00940000160397 ENSGT00940000157439 ENSGT00390000000603 ENSGT00940000161315 ENSGT00390000013474.b.a ENSGT00940000161498 ENSGT00940000159590 ENSGT00390000011219 ENSGT00940000154534.a ENSGT00390000000713 ENSGT00390000004405.b ENSGT00950000182892.a.b.a.a ENSGT00940000154152.d.b ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000154172.gb.b.b.b #22 ENSGT00940000159503 ENSGT00940000155029.c.b ENSGT00940000159774 ENSGT00940000162072 ENSGT00940000158354 ENSGT00940000161108 ENSGT00940000161230 ENSGT00940000161529 ENSGT00940000161386 ENSGT00940000159029 ENSGT00940000161434 ENSGT00940000154298.a.b ENSGT00940000159091 ENSGT01100000264599 ENSGT00390000007843.u.a Cebidae_a ANCESTRAL SPECIES 1 ENSGT00940000160397 ENSGT00940000157439 ENSGT00390000000603 ENSGT00940000161315 ENSGT00390000013474.b.a ENSGT00940000161498 ENSGT00940000159590 ENSGT00390000011219 ENSGT00940000154534.a ENSGT00390000000713 ENSGT00390000004405.b ENSGT00950000182892.a.b.a.a ENSGT00940000154152.d.b ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000154172.gb.b.b.b #22 ENSGT00940000159503 ENSGT00940000155029.c.b ENSGT00940000159774 ENSGT00940000162072 ENSGT00940000158354 ENSGT00940000161108 ENSGT00940000161230 ENSGT00940000161529 ENSGT00940000161386 ENSGT01050000247531 ENSGT00860000135909 ENSGT00940000159029 ENSGT00940000161434 ENSGT00950000183025.a.t.b ENSGT00940000159720 Capuchin MODERN SPECIES 228 TBKBP1 (ENSCCAG00000026129) TBX21 (ENSCCAG00000026112) OSBPL7 (ENSCCAG00000034097) MRPL10 (ENSCCAG00000023150) LRRC46 (ENSCCAG00000030568) SCRN2 (ENSCCAG00000031435) SP6 (ENSCCAG00000020330) SP2 (ENSCCAG00000038047) PNPO (ENSCCAG00000029175) CDK5RAP3 (ENSCCAG00000038053) COPZ2 (ENSCCAG00000021292) NFE2L1 (ENSCCAG00000029090) CBX1 (ENSCCAG00000025085) SNX11 (ENSCCAG00000030167) SKAP1 (ENSCCAG00000035663) ENSCCAG00000019181 #22 HOXB1 (ENSCCAG00000027667) HOXB2 (ENSCCAG00000024035) HOXB3 (ENSCCAG00000013598) HOXB4 (ENSCCAG00000020311) HOXB5 (ENSCCAG00000036867) HOXB6 (ENSCCAG00000022842) HOXB8 (ENSCCAG00000026051) HOXB9 (ENSCCAG00000035938) HOXB7 (ENSCCAG00000023947) ENSCCAG00000019672 ENSCCAG00000036164 HOXB13 (ENSCCAG00000036871) Marmoset MODERN SPECIES 17 OSBPL7 (ENSCJAG00000007585) MRPL10 (ENSCJAG00000007787) LRRC46 (ENSCJAG00000007776) SCRN2 (ENSCJAG00000047705) SP6 (ENSCJAG00000043946) SP2 (ENSCJAG00000007713) PNPO (ENSCJAG00000007693) PRR15L (ENSCJAG00000044487) CDK5RAP3 (ENSCJAG00000007669) COPZ2 (ENSCJAG00000007567) ENSCJAG00000058197 NFE2L1 (ENSCJAG00000007542) CBX1 (ENSCJAG00000042052) SNX11 (ENSCJAG00000039549) SKAP1 (ENSCJAG00000007504) ENSCJAG00000038853 #22 HOXB1 (ENSCJAG00000007496) HOXB2 (ENSCJAG00000007494) HOXB3 (ENSCJAG00000007487) HOXB4 (ENSCJAG00000007480) HOXB5 (ENSCJAG00000007472) HOXB6 (ENSCJAG00000007467) HOXB7 (ENSCJAG00000007457) HOXB8 (ENSCJAG00000045730) HOXB9 (ENSCJAG00000007442) HOXB13 (ENSCJAG00000007437) TTLL6 (ENSCJAG00000007395) CALCOCO2 (ENSCJAG00000007375) ATP5MC1 (ENSCJAG00000075375) UBE2Z (ENSCJAG00000007326) SNF8 (ENSCJAG00000007322) Mas night monkey MODERN SPECIES 500 ENSANAG00000033986 KCNG3 (ENSANAG00000022486) ENSANAG00000035965 ENSANAG00000031751 ENSANAG00000034342 EML4 (ENSANAG00000034852) PKDCC (ENSANAG00000026503) ENSANAG00000028164 ENSANAG00000028309 SLC8A1 (ENSANAG00000030032) THUMPD2 (ENSANAG00000034298) TMEM178A (ENSANAG00000020117) ENSANAG00000024412 MAP4K3 (ENSANAG00000017560) CDKL4 (ENSANAG00000020544) ENSANAG00000011026 #22 ENSANAG00000028385 SOS1 (ENSANAG00000031815) ARHGEF33 (ENSANAG00000020774) MORN2 (ENSANAG00000034674) ENSANAG00000020674 Simiiformes ANCESTRAL SPECIES ENSGT00940000154172.hb #22 Catarrhini ANCESTRAL SPECIES ENSGT00940000154172.hb #22 Hominoidea ANCESTRAL SPECIES ENSGT00940000154172.hb #22 Hominidae ANCESTRAL SPECIES ENSGT00940000154172.hb #22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000154172.hb #22 Homo/Pan group ANCESTRAL SPECIES 51 ENSGT00530000063023.B.o.a.a.b ENSGT00530000063023.B.o.b.f ENSGT00940000154172.hb #22 ENSGT00530000063023.B.o.b.e Pan ANCESTRAL SPECIES 57 ENSGT00530000063023.B.o.a.a.b ENSGT00530000063023.B.o.b.f ENSGT00940000154172.hb #22 ENSGT00530000063023.B.o.b.e Chimpanzee DUPLICATION Chimpanzee DUPLICATION Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 20 PPP1R17 (ENSPTRG00000019052) PDE1C (ENSPTRG00000019053) LSM5 (ENSPTRG00000019057) AVL9 (ENSPTRG00000019058) KBTBD2 (ENSPTRG00000019063) ENSPTRG00000047538 FKBP9 (ENSPTRG00000019066) NT5C3A (ENSPTRG00000050932) RP9 (ENSPTRG00000019068) BBS9 (ENSPTRG00000019069) ENSPTRG00000045232 BMPER (ENSPTRG00000019072) NPSR1 (ENSPTRG00000019073) DPY19L1 (ENSPTRG00000019074) ENSPTRG00000042939 ENSPTRG00000049740 #22 TBX20 (ENSPTRG00000019076) ENSPTRG00000050385 HERPUD2 (ENSPTRG00000019078) ENSPTRG00000050175 SEPTIN7 (ENSPTRG00000019080) ENSPTRG00000049276 EEPD1 (ENSPTRG00000019082) MATCAP2 (ENSPTRG00000019083) ANLN (ENSPTRG00000019084) AOAH (ENSPTRG00000019085) ELMO1 (ENSPTRG00000019087) ENSPTRG00000051165 ENSPTRG00000045844 GPR141 (ENSPTRG00000019089) NME8 (ENSPTRG00000019091) Chimpanzee MODERN SPECIES 603 ENSPTRG00000049681 ENSPTRG00000048368 #22 ENSPTRG00000051764 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 3 TSFM (ENSPTRG00000005152) AVIL (ENSPTRG00000005153) CTDSP2 (ENSPTRG00000005155) ATP23 (ENSPTRG00000005156) LRIG3 (ENSPTRG00000005159) ENSPTRG00000044366 SLC16A7 (ENSPTRG00000005160) ENSPTRG00000038999 TAFA2 (ENSPTRG00000005162) ENSPTRG00000048315 USP15 (ENSPTRG00000005163) MON2 (ENSPTRG00000005164) PPM1H (ENSPTRG00000005165) ENSPTRG00000049319 AVPR1A (ENSPTRG00000005167) ENSPTRG00000051663 #22 DPY19L2 (ENSPTRG00000005168) RXYLT1 (ENSPTRG00000005169) ENSPTRG00000047501 SRGAP1 (ENSPTRG00000005170) KICS2 (ENSPTRG00000005171) ENSPTRG00000050395 C12H12orf56 (ENSPTRG00000005172) XPOT (ENSPTRG00000005173) TBK1 (ENSPTRG00000005174) RASSF3 (ENSPTRG00000005175) GNS (ENSPTRG00000005176) TBC1D30 (ENSPTRG00000005177) WIF1 (ENSPTRG00000005179) LEMD3 (ENSPTRG00000005180) MSRB3 (ENSPTRG00000005181) Chimpanzee MODERN SPECIES 705 ENSPTRG00000051553 ENSPTRG00000045347 #22 Chimpanzee MODERN SPECIES 20 ALKBH4 (ENSPTRG00000019538) LRWD1 (ENSPTRG00000019539) ENSPTRG00000019132 ENSPTRG00000046067 ENSPTRG00000019540 ENSPTRG00000022966 ENSPTRG00000028440 ENSPTRG00000047581 FAM185A (ENSPTRG00000019543) FBXL13 (ENSPTRG00000019544) LRRC17 (ENSPTRG00000019545) ARMC10 (ENSPTRG00000019546) NAPEPLD (ENSPTRG00000019547) ENSPTRG00000051551 ENSPTRG00000050262 ENSPTRG00000047221 #22 PMPCB (ENSPTRG00000019551) DNAJC2 (ENSPTRG00000019552) PSMC2 (ENSPTRG00000019553) SLC26A5 (ENSPTRG00000019554) RELN (ENSPTRG00000019557) ORC5 (ENSPTRG00000019561) LHFPL3 (ENSPTRG00000019562) ENSPTRG00000040264 ENSPTRG00000046659 KMT2E (ENSPTRG00000019563) SRPK2 (ENSPTRG00000019564) ENSPTRG00000048913 PUS7 (ENSPTRG00000019565) ENSPTRG00000051005 RINT1 (ENSPTRG00000019566) Orangutan MODERN SPECIES 20 ADCYAP1R1 (ENSPPYG00000017667) NEUROD6 (ENSPPYG00000017666) ITPRID1 (ENSPPYG00000017664) PPP1R17 (ENSPPYG00000017663) PDE1C (ENSPPYG00000017662) LSM5 (ENSPPYG00000017661) AVL9 (ENSPPYG00000017660) KBTBD2 (ENSPPYG00000039601) FKBP9 (ENSPPYG00000017654) NT5C3A (ENSPPYG00000017653) RP9 (ENSPPYG00000017652) BBS9 (ENSPPYG00000017651) BMPER (ENSPPYG00000017649) NPSR1 (ENSPPYG00000017645) DPY19L1 (ENSPPYG00000017644) ENSPPYG00000036761 #22 DPY19L2 (ENSPPYG00000017642) TBX20 (ENSPPYG00000017641) HERPUD2 (ENSPPYG00000017640) SEPTIN7 (ENSPPYG00000017639) ENSPPYG00000017638 EEPD1 (ENSPPYG00000017637) MATCAP2 (ENSPPYG00000017636) ANLN (ENSPPYG00000017635) ENSPPYG00000017634 ELMO1 (ENSPPYG00000017632) ENSPPYG00000034122 GPR141 (ENSPPYG00000017631) NME8 (ENSPPYG00000017630) SFRP4 (ENSPPYG00000017629) EPDR1 (ENSPPYG00000034531) Cercopithecidae ANCESTRAL SPECIES 150 ENSGT00940000154172.hb #22 ENSGT00530000063023.B.o.b.c.b Cercopithecinae ANCESTRAL SPECIES 8 ENSGT00940000153759.a.a ENSGT00940000156795 ENSGT00390000011708.a.k.a ENSGT00940000159600 ENSGT00940000157015 ENSGT00940000159858 ENSGT00940000157362 ENSGT00940000159827 ENSGT00940000161762 ENSGT00390000005586 ENSGT00940000155331.A ENSGT00940000154400.a.a.d.a.b ENSGT00390000001455.ab ENSGT00390000010255 ENSGT00530000063023.B.o.b.c.b ENSGT00940000154172.hb #22 ENSGT00940000156069 ENSGT00940000162896.p ENSGT00940000157125 ENSGT00390000012959.b ENSGT00940000162490 ENSGT00910000147540 ENSGT00940000162896.o ENSGT00390000000803 ENSGT00940000156485 ENSGT00940000155094 ENSGT00530000063023.B.o.a ENSGT00530000063023.B.o.b.c.a ENSGT00940000158741 ENSGT00390000017671.a ENSGT00940000154222.d.b.c.a Vervet Monkey MODERN SPECIES 13 NOD1 (ENSCSAG00000014514) GGCT (ENSCSAG00000014526) ENSCSAG00000014560 GARS1 (ENSCSAG00000014588) CRHR2 (ENSCSAG00000014665) INMT (ENSCSAG00000014685) MINDY4 (ENSCSAG00000014753) AQP1 (ENSCSAG00000014769) GHRHR (ENSCSAG00000014774) ADCYAP1R1 (ENSCSAG00000014781) NEUROD6 (ENSCSAG00000019605) ITPRID1 (ENSCSAG00000014801) PPP1R17 (ENSCSAG00000014815) PDE1C (ENSCSAG00000014827) AVL9 (ENSCSAG00000014841) ENSCSAG00000019604 #22 KBTBD2 (ENSCSAG00000014849) FKBP9 (ENSCSAG00000014855) NT5C3A (ENSCSAG00000014863) RP9 (ENSCSAG00000014871) BBS9 (ENSCSAG00000014886) BMPER (ENSCSAG00000014898) NPSR1 (ENSCSAG00000014907) DPY19L1 (ENSCSAG00000014922) ENSCSAG00000014927 TBX20 (ENSCSAG00000014936) HERPUD2 (ENSCSAG00000014942) SEPTIN7 (ENSCSAG00000014993) EEPD1 (ENSCSAG00000015009) MATCAP2 (ENSCSAG00000015014) ANLN (ENSCSAG00000015026) Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT00500000044921.b ENSGT00940000153759.a.a ENSGT00940000156795 ENSGT00390000011708.a.k.a ENSGT00940000159600 ENSGT00940000157015 ENSGT00940000159858 ENSGT00940000157362 ENSGT00940000159827 ENSGT00940000161762 ENSGT00390000005586 ENSGT00940000155331.A ENSGT00390000000628.w.a.b ENSGT00390000001455.ab ENSGT00390000010255 ENSGT00940000154172.hb #22 ENSGT00530000063023.B.o.b.c.b ENSGT00940000156069 ENSGT00940000162896.p ENSGT00940000157125 ENSGT00390000012959.b ENSGT00940000162490 ENSGT00910000147540 ENSGT00940000162896.o ENSGT00390000000803 ENSGT00940000156485 ENSGT00940000155094 ENSGT00530000063023.B.o.a ENSGT00530000063023.B.o.b.c.a ENSGT00940000158741 ENSGT00390000017671.a Cercopithecinae_b ANCESTRAL SPECIES 11 ENSGT00500000044921.b ENSGT00940000153759.a.a ENSGT00940000156795 ENSGT00390000011708.a.k.a ENSGT00940000159600 ENSGT00940000157015 ENSGT00940000159858 ENSGT00940000157362 ENSGT00940000159827 ENSGT00940000161762 ENSGT00390000005586 ENSGT00940000155331.A ENSGT00390000000628.w.a.b ENSGT00390000001455.ab ENSGT00390000010255 ENSGT00940000154172.hb #22 ENSGT00940000156069 ENSGT00940000162896.p ENSGT00940000157125 ENSGT00390000012959.b ENSGT00940000162490 ENSGT00910000147540 ENSGT00940000162896.o ENSGT00390000000803 ENSGT00940000156485 ENSGT00940000155094 ENSGT00530000063023.B.o.a ENSGT00530000063023.B.o.b.c.a ENSGT00940000158741 ENSGT00390000017671.a ENSGT00900000143758 Cercopithecinae_d ANCESTRAL SPECIES 10 ENSGT00500000044921.b ENSGT00940000153759.a.a ENSGT00940000156795 ENSGT00390000011708.a.k.a ENSGT00940000159600 ENSGT00940000157015 ENSGT00940000159858 ENSGT00940000157362 ENSGT00940000159827 ENSGT00940000161762 ENSGT00390000005586 ENSGT00940000155331.A ENSGT00390000000628.w.a.b ENSGT00390000001455.ab ENSGT00390000010255 ENSGT00940000154172.hb #22 ENSGT00940000156069 ENSGT00940000162896.p ENSGT00940000157125 ENSGT00390000012959.b ENSGT00940000162490 ENSGT00910000147540 ENSGT00940000162896.o ENSGT00390000000803 ENSGT00940000156485 ENSGT00940000155094 ENSGT00530000063023.B.o.a ENSGT00530000063023.B.o.b.c.a ENSGT00940000158741 ENSGT00390000017671.a ENSGT00900000143758 Drill MODERN SPECIES 1492 ENSMLEG00000033953 #22 KBTBD2 (ENSMLEG00000038199) FKBP9 (ENSMLEG00000030839) NT5C3A (ENSMLEG00000033761) ENSMLEG00000037088 BBS9 (ENSMLEG00000031696) Sooty mangabey MODERN SPECIES 98 GARS1 (ENSCATG00000036699) CRHR2 (ENSCATG00000044419) INMT (ENSCATG00000032476) MINDY4 (ENSCATG00000005966) AQP1 (ENSCATG00000015942) GHRHR (ENSCATG00000042880) ADCYAP1R1 (ENSCATG00000033504) NEUROD6 (ENSCATG00000022132) ITPRID1 (ENSCATG00000042778) PDE1C (ENSCATG00000031111) PPP1R17 (ENSCATG00000021623) ENSCATG00000040486 ENSCATG00000040218 AVL9 (ENSCATG00000040889) ENSCATG00000034943 ENSCATG00000042918 #22 KBTBD2 (ENSCATG00000031782) ENSCATG00000038707 FKBP9 (ENSCATG00000004144) NT5C3A (ENSCATG00000040035) ENSCATG00000018691 RP9 (ENSCATG00000031396) BBS9 (ENSCATG00000043268) BMPER (ENSCATG00000037912) NPSR1 (ENSCATG00000037214) DPY19L1 (ENSCATG00000042488) DPY19L2 (ENSCATG00000036176) TBX20 (ENSCATG00000041553) ENSCATG00000005095 HERPUD2 (ENSCATG00000042190) SEPTIN7 (ENSCATG00000040605) Macaca ANCESTRAL SPECIES 3 ENSGT00500000044921.b ENSGT00940000153759.a.a ENSGT00940000156795 ENSGT00390000011708.a.k.a ENSGT00940000159600 ENSGT00940000157015 ENSGT00940000159858 ENSGT00940000157362 ENSGT00940000159827 ENSGT00940000161762 ENSGT00390000005586 ENSGT00940000155331.A ENSGT00390000000628.w.a.b ENSGT00390000001455.ab ENSGT00390000010255 ENSGT00940000154172.hb #22 ENSGT00530000063023.B.o.b.c.b ENSGT00940000156069 ENSGT00940000162896.p ENSGT00940000157125 ENSGT00390000012959.b ENSGT00910000147540 ENSGT00940000162896.o ENSGT00390000000803 ENSGT00940000156485 ENSGT00940000155094 ENSGT00530000063023.B.o.a ENSGT00530000063023.B.o.b.c.a ENSGT00940000158741 ENSGT00390000017671.a ENSGT00940000154222.d.b.d.b Macaca_a ANCESTRAL SPECIES 7 ENSGT00940000157845 ENSGT00500000044921.b ENSGT00940000153759.a.a ENSGT00940000156795 ENSGT00390000011708.a.k.a ENSGT00940000159600 ENSGT00940000159858 ENSGT00940000157362 ENSGT00940000159827 ENSGT00940000161762 ENSGT00390000005586 ENSGT00940000155331.A ENSGT00390000000628.w.a.b ENSGT00390000001455.ab ENSGT00390000010255 ENSGT00940000154172.hb #22 ENSGT00530000063023.B.o.b.c.b ENSGT00940000156069 ENSGT00940000162896.p ENSGT00940000157125 ENSGT00390000012959.b ENSGT00940000162896.o ENSGT00390000000803 ENSGT00940000156485 ENSGT00940000155094 ENSGT00530000063023.B.o.a ENSGT00530000063023.B.o.b.c.a ENSGT00940000158741 ENSGT00390000017671.a ENSGT00940000154222.d.b.d.b ENSGT00390000009677 Crab-eating macaque MODERN SPECIES 13 CRHR2 (ENSMFAG00000046108) INMT (ENSMFAG00000035609) GHRHR (ENSMFAG00000031512) MINDY4 (ENSMFAG00000013399) ADCYAP1R1 (ENSMFAG00000040314) NEUROD6 (ENSMFAG00000025612) ITPRID1 (ENSMFAG00000000805) PPP1R17 (ENSMFAG00000002182) ENSMFAG00000002209 PDE1C (ENSMFAG00000046067) ENSMFAG00000050533 ENSMFAG00000038508 ENSMFAG00000065398 AVL9 (ENSMFAG00000030881) ENSMFAG00000061438 ENSMFAG00000035736 #22 ENSMFAG00000034279 KBTBD2 (ENSMFAG00000045193) ENSMFAG00000051384 FKBP9 (ENSMFAG00000032555) NT5C3A (ENSMFAG00000046405) RP9 (ENSMFAG00000001526) ENSMFAG00000050819 ENSMFAG00000059072 ENSMFAG00000061829 BBS9 (ENSMFAG00000045258) BMPER (ENSMFAG00000040626) NPSR1 (ENSMFAG00000040833) DPY19L1 (ENSMFAG00000041115) ENSMFAG00000034063 TBX20 (ENSMFAG00000046090) Pig-tailed macaque MODERN SPECIES 534 GARS1 (ENSMNEG00000043203) CRHR2 (ENSMNEG00000040298) INMT (ENSMNEG00000036731) MINDY4 (ENSMNEG00000022974) AQP1 (ENSMNEG00000041376) GHRHR (ENSMNEG00000043910) ADCYAP1R1 (ENSMNEG00000043144) NEUROD6 (ENSMNEG00000002324) ITPRID1 (ENSMNEG00000043004) PPP1R17 (ENSMNEG00000041897) PDE1C (ENSMNEG00000008546) ENSMNEG00000036069 ENSMNEG00000015331 AVL9 (ENSMNEG00000039882) ENSMNEG00000042348 ENSMNEG00000039454 #22 NPSR1 (ENSMNEG00000036615) BMPER (ENSMNEG00000020020) BBS9 (ENSMNEG00000043281) RP9 (ENSMNEG00000044114) ENSMNEG00000019021 NT5C3A (ENSMNEG00000038775) FKBP9 (ENSMNEG00000036551) ENSMNEG00000035178 KBTBD2 (ENSMNEG00000042522) DPY19L1 (ENSMNEG00000043561) ENSMNEG00000044297 TBX20 (ENSMNEG00000042525) HERPUD2 (ENSMNEG00000029390) ENSMNEG00000014441 SEPTIN7 (ENSMNEG00000030328) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000165746 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000163498 #15 ENSGT00940000163905 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Tree shrew MODERN SPECIES 4986 ENSTBEG00000016491 ENSTBEG00000016356 #21 ENSTBEG00000016141 #22 S100A10 (ENSTBEG00000016106) ##23 Glires ANCESTRAL SPECIES ENSGT00940000165746 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000163498 #15 ENSGT00940000163905 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Rodentia ANCESTRAL SPECIES ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000163498 #15 ENSGT00940000163905 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Rodentia_B ANCESTRAL SPECIES ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000162657 ENSGT00700000104637 ENSGT00730000111592 ENSGT00730000111554 ENSGT00940000161842.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Kangaroo rat MODERN SPECIES 345 Pglyrp3 (ENSDORG00000003424) ENSDORG00000028790 ENSDORG00000027976 ENSDORG00000026601 ENSDORG00000029886 ENSDORG00000029857 ENSDORG00000024714 ENSDORG00000025777 ENSDORG00000011451 Kprp (ENSDORG00000026948) ENSDORG00000023568 ENSDORG00000026274 ENSDORG00000003644 ENSDORG00000025569 Crnn (ENSDORG00000002349) #16 S100a11 (ENSDORG00000027002) #22 ENSDORG00000026060 ##23 Them4 (ENSDORG00000015331) #24 Them5 (ENSDORG00000015328) #25 Rorc (ENSDORG00000015326) #26 Lingo4 (ENSDORG00000027587) #27 Tdrkh (ENSDORG00000015322) #28 Oaz3 (ENSDORG00000015321) #29 Mrpl9 (ENSDORG00000015320) #30 Celf3 (ENSDORG00000002488) #32 Snx27 (ENSDORG00000014172) #33 Tuft1 (ENSDORG00000026884) #34 ENSDORG00000007338 #35 Pogz (ENSDORG00000025298) #36 Psmb4 (ENSDORG00000028831) ENSDORG00000015968 Myomorpha ANCESTRAL SPECIES 12 ENSGT00910000144329 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000162657 ENSGT00700000104637 ENSGT00730000111592 ENSGT00730000111554 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Lesser Egyptian jerboa MODERN SPECIES 141 ENSJJAG00000002635 Pglyrp4 (ENSJJAG00000009619) Pglyrp3 (ENSJJAG00000019546) ENSJJAG00000005907 ENSJJAG00000009222 ENSJJAG00000005176 ENSJJAG00000007620 ENSJJAG00000022880 ENSJJAG00000014882 Kprp (ENSJJAG00000004578) 2310050C09Rik (ENSJJAG00000016312) ENSJJAG00000010637 ENSJJAG00000023669 ENSJJAG00000003622 ENSJJAG00000017745 #16 S100a11 (ENSJJAG00000016706) #22 S100a10 (ENSJJAG00000015567) ##23 Them4 (ENSJJAG00000010836) #24 Rorc (ENSJJAG00000009867) #26 Lingo4 (ENSJJAG00000017052) #27 Tdrkh (ENSJJAG00000000323) #28 Oaz3 (ENSJJAG00000006341) #29 Mrpl9 (ENSJJAG00000018784) #30 Riiad1 (ENSJJAG00000021268) #31 Celf3 (ENSJJAG00000020104) #32 Snx27 (ENSJJAG00000023845) #33 Tuft1 (ENSJJAG00000011616) #34 ENSJJAG00000003080 Pogz (ENSJJAG00000009420) #36 Psmb4 (ENSJJAG00000012721) ENSJJAG00000006656 Muroidea ANCESTRAL SPECIES 6 ENSGT01020000230889 ENSGT00780000122937 ENSGT00940000169512 #14 ENSGT00730000111580 ENSGT00940000163710 ENSGT01010000222956 ENSGT01100000265211 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00940000161842.a ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905 ENSGT00940000163710.q.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000154376.b.e.a ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 Cricetidae ANCESTRAL SPECIES 6 ENSGT00730000114093 ENSGT00780000122937 ENSGT00940000167222 ENSGT01050000245068.A ENSGT00940000161842.a.c ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905 ENSGT01100000265211 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000154376.b.e.a ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 Cricetinae ANCESTRAL SPECIES 13 ENSGT00940000167222 ENSGT01050000245068.A ENSGT01070000254540 ENSGT01050000245068.B ENSGT00940000161842.a.c ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905 ENSGT01100000266463 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 Golden Hamster MODERN SPECIES 714 ENSMAUG00000009481 ENSMAUG00000008992 ENSMAUG00000014317 ENSMAUG00000021993 ENSMAUG00000018162 ENSMAUG00000018011 Kprp (ENSMAUG00000009358) ENSMAUG00000009030 2310050C09Rik (ENSMAUG00000021982) ENSMAUG00000008983 ENSMAUG00000009303 ENSMAUG00000009142 ENSMAUG00000003498 Crnn (ENSMAUG00000001754) #16 Tchhl1 (ENSMAUG00000017940) #21 S100a11 (ENSMAUG00000019826) #22 ENSMAUG00000021385 ##23 Chinese hamster chok1gshd MODERN SPECIES 352 ENSCGRG00001015003 Kprp (ENSCGRG00001011269) ENSCGRG00001013323 ENSCGRG00001011007 ENSCGRG00001011825 ENSCGRG00001011142 ENSCGRG00001011125 ENSCGRG00001010698 ENSCGRG00001010946 Crnn (ENSCGRG00001009912) #16 Flg2 (ENSCGRG00001004341) #17 ENSCGRG00001024443 #18 ENSCGRG00001013639 #19 ENSCGRG00001017115 #20 Tchhl1 (ENSCGRG00001014681) #21 S100a11 (ENSCGRG00001023641) #22 S100a10 (ENSCGRG00001013243) ##23 Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00940000164168 ENSGT00730000114093 ENSGT00780000122937 ENSGT00940000167222 ENSGT00940000161842.a.c ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905 ENSGT01100000265211 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.a #19 ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000154376.b.e.a ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 Prairie vole MODERN SPECIES 93 Msgn1 (ENSMOCG00000003059) Gen1 (ENSMOCG00000000146) Smc6 (ENSMOCG00000009440) Vsnl1 (ENSMOCG00000000359) Rad51ap2 (ENSMOCG00000012235) ENSMOCG00000002918 ENSMOCG00000004702 #22 Cyria (ENSMOCG00000015524) Mycn (ENSMOCG00000012273) Ddx1 (ENSMOCG00000000257) Nbas (ENSMOCG00000009751) Lratd1 (ENSMOCG00000015863) Trib2 (ENSMOCG00000006314) ENSMOCG00000002531 Lpin1 (ENSMOCG00000014921) Ntsr2 (ENSMOCG00000005558) Greb1 (ENSMOCG00000012442) ENSMOCG00000019419 Rock2 (ENSMOCG00000004291) Pqlc3 (ENSMOCG00000020689) 2410004P03Rik (ENSMOCG00000005186) Kcnf1 (ENSMOCG00000002002) Northern American deer mouse MODERN SPECIES 19 ENSPEMG00000030283 ENSPEMG00000002108 Kprp (ENSPEMG00000003567) ENSPEMG00000007888 ENSPEMG00000024567 ENSPEMG00000028390 ENSPEMG00000030519 ENSPEMG00000025047 Crct1 (ENSPEMG00000025851) Lce1m (ENSPEMG00000028998) Crnn (ENSPEMG00000015891) #16 ENSPEMG00000027135 #17 ENSPEMG00000029220 #18 ENSPEMG00000009460 #19 Tchhl1 (ENSPEMG00000023251) #21 S100a11 (ENSPEMG00000027141) #22 ENSPEMG00000028727 ##23 ENSPEMG00000028073 ENSPEMG00000010771 Them4 (ENSPEMG00000017604) #24 Them5 (ENSPEMG00000009567) #25 C2cd4d (ENSPEMG00000029177) Rorc (ENSPEMG00000019266) #26 Lingo4 (ENSPEMG00000002211) #27 Tdrkh (ENSPEMG00000011171) #28 Oaz3 (ENSPEMG00000008922) #29 Mrpl9 (ENSPEMG00000011374) #30 Riiad1 (ENSPEMG00000019003) #31 Celf3 (ENSPEMG00000001184) #32 Snx27 (ENSPEMG00000009710) #33 Tuft1 (ENSPEMG00000014366) #34 Murinae ANCESTRAL SPECIES 5 ENSGT00940000161842.a ENSGT00960000186821 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163710.q.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000154376.b.e.a.k ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 Rat DUPLICATION Rat DUPLICATION Rat DUPLICATION Rat DUPLICATION Rat MODERN SPECIES 8 ENSRNOG00000063737 Aopep (ENSRNOG00000017505) Fancc (ENSRNOG00000016889) Ptch1 (ENSRNOG00000019354) Ercc6l2 (ENSRNOG00000019175) Hsd17b3 (ENSRNOG00000019096) Slc35d2 (ENSRNOG00000027229) Zfp367 (ENSRNOG00000027234) Habp4 (ENSRNOG00000019027) Cdc14b (ENSRNOG00000018999) Prxl2c (ENSRNOG00000018886) Ctsl (ENSRNOG00000018566) AABR07026797.1 (ENSRNOG00000018554) Cdk20 (ENSRNOG00000017991) Fam240b (ENSRNOG00000050209) AABR07026805.2 (ENSRNOG00000040101) #22 Cntnap3 (ENSRNOG00000027309) Spata31a5 (ENSRNOG00000018202) ##12 Spata31d1c (ENSRNOG00000040116) ##12 Prss47 (ENSRNOG00000031461) Mfsd14b (ENSRNOG00000018227) Or14p1 (ENSRNOG00000018489) Or9s18 (ENSRNOG00000067756) Rat MODERN SPECIES Tmc5 (ENSRNOG00000036760) ENSRNOG00000068048 Tmc7 (ENSRNOG00000016679) Coq7 (ENSRNOG00000017012) Itpripl2 (ENSRNOG00000069633) Syt17 (ENSRNOG00000017136) Smg1 (ENSRNOG00000047386) Arl6ip1 (ENSRNOG00000017751) Rps15a (ENSRNOG00000018320) Xylt1 (ENSRNOG00000056658) LOC100912427 (ENSRNOG00000030807) Nucb2 (ENSRNOG00000020456) LOC100911093 (ENSRNOG00000020477) Pik3c2a (ENSRNOG00000020479) Rps13 (ENSRNOG00000068955) ENSRNOG00000070857 #22 Plekha7 (ENSRNOG00000024602) C1h11orf58 (ENSRNOG00000053659) Sox6 (ENSRNOG00000020514) Insc (ENSRNOG00000024712) Calca (ENSRNOG00000011130) Cyp2r1 (ENSRNOG00000011367) LOC102548890 (ENSRNOG00000062071) Pde3b (ENSRNOG00000011417) LOC691427 (ENSRNOG00000066701) Psma1 (ENSRNOG00000011745) Copb1 (ENSRNOG00000057623) AABR07005506.1 (ENSRNOG00000025122) Rras2 (ENSRNOG00000012258) Spon1 (ENSRNOG00000058003) Far1 (ENSRNOG00000013176) Rat MODERN SPECIES 11 LOC100911982 (ENSRNOG00000070776) LOC120100589 (ENSRNOG00000064953) Lce3fl1 (ENSRNOG00000063005) Crct1 (ENSRNOG00000009574) Lce1m (ENSRNOG00000009581) ENSRNOG00000065518 Crnn (ENSRNOG00000008721) #16 ENSRNOG00000064129 #17 ENSRNOG00000069536 #19 ENSRNOG00000064486 ##19 Rptn (ENSRNOG00000018679) #19 Tchh (ENSRNOG00000069082) #19 Tchh (ENSRNOG00000056746) #20 Tchhl1 (ENSRNOG00000009610) #21 ENSRNOG00000065314 S100a11 (ENSRNOG00000010105) #22 S100a10 (ENSRNOG00000023226) ##23 Tdpoz1-ps4 (ENSRNOG00000066364) RGD1566337 (ENSRNOG00000063844) LOC100911679 (ENSRNOG00000063988) RGD1564313 (ENSRNOG00000064397) Tdpoz2l1 (ENSRNOG00000062928) AABR07012426.1 (ENSRNOG00000050263) LOC120100595 (ENSRNOG00000065808) Tdpoz1-ps13 (ENSRNOG00000063069) Tdpoz1-ps14 (ENSRNOG00000063985) LOC120101040 (ENSRNOG00000070497) LOC120101042 (ENSRNOG00000064402) LOC120101043 (ENSRNOG00000068421) Tdpoz1-ps9 (ENSRNOG00000069915) Tdpoz2 (ENSRNOG00000065162) Rat MODERN SPECIES 3 Orai1 (ENSRNOG00000001336) Morn3 (ENSRNOG00000045574) Tmem120b (ENSRNOG00000048050) Rhof (ENSRNOG00000042607) Setd1b (ENSRNOG00000001337) Hpd (ENSRNOG00000001338) Cfap251 (ENSRNOG00000001342) Bcl7a (ENSRNOG00000056017) Mlxip (ENSRNOG00000001255) Il31 (ENSRNOG00000026192) Lrrc43 (ENSRNOG00000008470) B3gnt4 (ENSRNOG00000071128) Diablo (ENSRNOG00000029197) Vps33a (ENSRNOG00000056889) Clip1 (ENSRNOG00000001247) LOC100359550 (ENSRNOG00000037978) #22 Zcchc8 (ENSRNOG00000001243) Rsrc2 (ENSRNOG00000001238) Kntc1 (ENSRNOG00000033658) Hcar2 (ENSRNOG00000026653) Hcar1 (ENSRNOG00000026661) Denr (ENSRNOG00000001106) Ccdc62 (ENSRNOG00000038002) Hip1r (ENSRNOG00000001091) Vps37b (ENSRNOG00000001086) Abcb9 (ENSRNOG00000001082) Arl6ip4 (ENSRNOG00000001080) Pitpnm2 (ENSRNOG00000029260) Mphosph9 (ENSRNOG00000001074) Mtrfr (ENSRNOG00000001073) Cdk2ap1 (ENSRNOG00000001070) Rat MODERN SPECIES 13 Vsx1 (ENSRNOG00000042220) Acss1 (ENSRNOG00000007102) Apmap (ENSRNOG00000006795) Cst7 (ENSRNOG00000006767) RGD1565143 (ENSRNOG00000055769) LOC103690174 (ENSRNOG00000068068) ENSRNOG00000064151 ENSRNOG00000070867 LOC102549291 (ENSRNOG00000069811) AABR07054262.1 (ENSRNOG00000056526) LOC102554315 (ENSRNOG00000067071) LOC102555033 (ENSRNOG00000067040) Rnaset2-ps1 (ENSRNOG00000005920) LOC102555217 (ENSRNOG00000065630) LOC102555578 (ENSRNOG00000065847) LOC100362296 (ENSRNOG00000065228) #22 LOC100911984 (ENSRNOG00000064299) ENSRNOG00000070080 AABR07027267.1 (ENSRNOG00000060618) Syndig1 (ENSRNOG00000031536) Cst5 (ENSRNOG00000005545) Cyssl1 (ENSRNOG00000036952) AABR07054232.1 (ENSRNOG00000043043) Cyss (ENSRNOG00000030857) LOC689220 (ENSRNOG00000030508) P22k15 (ENSRNOG00000030184) Fth1-ps5 (ENSRNOG00000033100) Andpro (ENSRNOG00000031840) AABR07054186.1 (ENSRNOG00000032769) Cst3 (ENSRNOG00000005195) Cstdc2 (ENSRNOG00000005178) Mus ANCESTRAL SPECIES 7 ENSGT00950000184448 ENSGT00730000111554 ENSGT00950000183531.b ENSGT00730000111580 ENSGT00940000163710.q.a.b.a.a ENSGT00940000163710.q.a.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Mus_A ANCESTRAL SPECIES 9 ENSGT00730000111554 ENSGT00950000183531.b ENSGT00730000111580 ENSGT00940000163710.q.a.b.a.a ENSGT00940000163710.q.a.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000153096.b.d.s.b ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Mus_B DUPLICATION Mus_B DUPLICATION Mus_B ANCESTRAL SPECIES 8 ENSGT00730000111554 ENSGT00950000183531.b ENSGT00730000111580 ENSGT00940000163710.q.a.b.a.a ENSGT00940000163710.q.a.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000153096.b.d.s.b ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172.kb.a #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Mus_C ANCESTRAL SPECIES 6 ENSGT00960000186821.b ENSGT00950000184448 ENSGT00730000111554 ENSGT00950000183531.b ENSGT00730000111580 ENSGT00940000163710.q.a.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000153096.b.d.s.b ENSGT00940000164620 ENSGT00940000162966 #21 ENSGT00940000154172.kb.a #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Steppe mouse DUPLICATION Steppe mouse DUPLICATION Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 3372 Zw10 (ENSMSIG00000013094) ENSMSIG00000013079 Usp28 (ENSMSIG00000012895) Htr3b (ENSMSIG00000012863) Htr3a (ENSMSIG00000012846) Zbtb16 (ENSMSIG00000012819) Nnmt (ENSMSIG00000012794) Rbm7 (ENSMSIG00000012760) Rexo2 (ENSMSIG00000012688) ENSMSIG00000012577 Nxpe4 (ENSMSIG00000012534) Nxpe2 (ENSMSIG00000012518) ENSMSIG00000012512 Cadm1 (ENSMSIG00000011500) ENSMSIG00000011463 ENSMSIG00000011446 #22 4931429L15Rik (ENSMSIG00000011321) Bud13 (ENSMSIG00000011279) Zpr1 (ENSMSIG00000011232) Apoa5 (ENSMSIG00000011204) ENSMSIG00000011188 Apoa4 (ENSMSIG00000011179) Apoc3 (ENSMSIG00000011168) ENSMSIG00000011165 Apoa1 (ENSMSIG00000011153) Sik3 (ENSMSIG00000011054) ENSMSIG00000011027 Sidt2 (ENSMSIG00000010816) Tagln (ENSMSIG00000010804) Pcsk7 (ENSMSIG00000010764) Rnf214 (ENSMSIG00000010654) Steppe mouse MODERN SPECIES 36 Or4x6 (ENSMSIG00000027938) Or4b1d (ENSMSIG00000027931) Or4b1 (ENSMSIG00000027927) Or4b13 (ENSMSIG00000027925) ENSMSIG00000027918 #22 Or4b12 (ENSMSIG00000027915) Or4b1b (ENSMSIG00000027914) Or4b1c (ENSMSIG00000027909) Or4x13 (ENSMSIG00000027904) Ptprj (ENSMSIG00000027884) Nup160 (ENSMSIG00000027860) ENSMSIG00000027856 Fnbp4 (ENSMSIG00000027843) Agbl2 (ENSMSIG00000027703) ENSMSIG00000027642 C1qtnf4 (ENSMSIG00000027637) Ndufs3 (ENSMSIG00000027630) Kbtbd4 (ENSMSIG00000027623) ENSMSIG00000027615 Celf1 (ENSMSIG00000027572) Steppe mouse MODERN SPECIES 2268 ENSMSIG00000013333 ##19 ENSMSIG00000013325 #19 ENSMSIG00000013304 ENSMSIG00000013297 #19 Tchhl1 (ENSMSIG00000013282) #21 ENSMSIG00000013266 #22 S100a10 (ENSMSIG00000013252) ##23 Steppe mouse MODERN SPECIES 2908 Efcab14 (ENSMSIG00000015293) Tex38 (ENSMSIG00000015281) Atpaf1 (ENSMSIG00000015226) Mob3c (ENSMSIG00000015218) ENSMSIG00000015142 Kncn (ENSMSIG00000015125) Tmem275 (ENSMSIG00000015119) Dmbx1 (ENSMSIG00000015099) Faah (ENSMSIG00000015049) ENSMSIG00000015016 ENSMSIG00000015007 ENSMSIG00000015002 #22 ENSMSIG00000014983 Lrrc41 (ENSMSIG00000014928) Rad54l (ENSMSIG00000014901) Lurap1 (ENSMSIG00000014888) Pomgnt1 (ENSMSIG00000014833) Tspan1 (ENSMSIG00000014810) P3r3urf (ENSMSIG00000014803) Pik3r3 (ENSMSIG00000014768) ENSMSIG00000014744 Mast2 (ENSMSIG00000014279) Ipp (ENSMSIG00000014220) Tmem69 (ENSMSIG00000014197) ENSMSIG00000014178 Gpbp1l1 (ENSMSIG00000014139) Nasp (ENSMSIG00000013861) Mouse MODERN SPECIES 12 Lce3b (ENSMUSG00000042031) Lce3c (ENSMUSG00000045475) Lce3d (ENSMUSG00000043472) Lce3e (ENSMUSG00000074433) Lce3f (ENSMUSG00000068885) Crct1 (ENSMUSG00000027913) Lce1m (ENSMUSG00000027912) Tdpoz8 (ENSMUSG00000096879) Crnn (ENSMUSG00000078657) #16 Flg2 (ENSMUSG00000049133) #17 Flg (ENSMUSG00000102439) #18 Hrnr (ENSMUSG00000041991) ##19 Rptn (ENSMUSG00000041984) #19 Tchh (ENSMUSG00000052415) Tchhl1 (ENSMUSG00000027908) #21 S100a11 (ENSMUSG00000027907) #22 S100a10 (ENSMUSG00000041959) ##23 Tdpoz2 (ENSMUSG00000103362) Tdpoz1 (ENSMUSG00000094084) Gm5773 (ENSMUSG00000068879) Tdpoz4 (ENSMUSG00000060256) Tdpoz3 (ENSMUSG00000058005) Tdpoz9-ps1 (ENSMUSG00000095822) Tdpoz5 (ENSMUSG00000094163) Tdpoz9 (ENSMUSG00000094328) Tdpoz7 (ENSMUSG00000095251) Spopfm2 (ENSMUSG00000074424) Spopfm3 (ENSMUSG00000090268) Them4 (ENSMUSG00000028145) #24 Them5 (ENSMUSG00000028148) #25 C2cd4d (ENSMUSG00000091648) Mus_B ANCESTRAL SPECIES ENSGT00940000154172.kb.b #22 Mus_C ANCESTRAL SPECIES ENSGT00940000154172.kb.b #22 Steppe mouse MODERN SPECIES 3155 Gm4756 (ENSMSIG00000024922) Dhrs7 (ENSMSIG00000024915) ENSMSIG00000024898 4930447C04Rik (ENSMSIG00000024836) Six6 (ENSMSIG00000024826) ENSMSIG00000024815 Six1 (ENSMSIG00000024807) Six4 (ENSMSIG00000024804) ENSMSIG00000024789 Mnat1 (ENSMSIG00000024773) Trmt5 (ENSMSIG00000024766) Slc38a6 (ENSMSIG00000024679) Tmem30b (ENSMSIG00000024663) Prkch (ENSMSIG00000024638) Hif1a (ENSMSIG00000024611) ENSMSIG00000024606 #22 Snapc1 (ENSMSIG00000024569) Mus_B ANCESTRAL SPECIES ENSGT00940000154172.lb #22 Mus_C ANCESTRAL SPECIES ENSGT00940000154172.lb #22 spretus MODERN SPECIES 12 MGP_SPRETEiJ_G0026228 Lce1k (MGP_SPRETEiJ_G0026229) Kprp (MGP_SPRETEiJ_G0026231) Lce1l (MGP_SPRETEiJ_G0026232) 2310050C09Rik (MGP_SPRETEiJ_G0026233) MGP_SPRETEiJ_G0026234 MGP_SPRETEiJ_G0026235 Crct1 (MGP_SPRETEiJ_G0026236) Lce1m (MGP_SPRETEiJ_G0026237) Crnn (MGP_SPRETEiJ_G0026238) #16 Flg (MGP_SPRETEiJ_G0026240) #18 MGP_SPRETEiJ_G0026241 #19 MGP_SPRETEiJ_G0026242 Tchh (MGP_SPRETEiJ_G0026243) Tchhl1 (MGP_SPRETEiJ_G0026244) #21 MGP_SPRETEiJ_G0026245 #22 S100a10 (MGP_SPRETEiJ_G0026246) ##23 Them4 (MGP_SPRETEiJ_G0026247) #24 Them5 (MGP_SPRETEiJ_G0026248) #25 C2cd4d (MGP_SPRETEiJ_G0026249) Rorc (MGP_SPRETEiJ_G0026250) #26 Lingo4 (MGP_SPRETEiJ_G0026251) #27 Tdrkh (MGP_SPRETEiJ_G0026252) #28 MGP_SPRETEiJ_G0026253 #29 Mrpl9 (MGP_SPRETEiJ_G0026254) #30 Riiad1 (MGP_SPRETEiJ_G0026255) #31 Celf3 (MGP_SPRETEiJ_G0026256) #32 Snx27 (MGP_SPRETEiJ_G0026257) #33 MGP_SPRETEiJ_G0026258 #34 MGP_SPRETEiJ_G0026259 MGP_SPRETEiJ_G0026260 #35 Ryukyu mouse MODERN SPECIES 12 MGP_CAROLIEiJ_G0025288 MGP_CAROLIEiJ_G0025289 MGP_CAROLIEiJ_G0025290 MGP_CAROLIEiJ_G0025291 MGP_CAROLIEiJ_G0025292 Crct1 (MGP_CAROLIEiJ_G0025293) Lce1m (MGP_CAROLIEiJ_G0025294) Crnn (MGP_CAROLIEiJ_G0025295) #16 MGP_CAROLIEiJ_G0025296 #17 Flg (MGP_CAROLIEiJ_G0025297) #18 MGP_CAROLIEiJ_G0025298 MGP_CAROLIEiJ_G0025299 #19 MGP_CAROLIEiJ_G0025300 MGP_CAROLIEiJ_G0025301 Tchhl1 (MGP_CAROLIEiJ_G0025302) #21 S100a11 (MGP_CAROLIEiJ_G0025303) #22 S100a10 (MGP_CAROLIEiJ_G0025304) ##23 MGP_CAROLIEiJ_G0025305 #24 MGP_CAROLIEiJ_G0025306 #25 C2cd4d (MGP_CAROLIEiJ_G0025307) Rorc (MGP_CAROLIEiJ_G0025308) #26 Lingo4 (MGP_CAROLIEiJ_G0025309) #27 Tdrkh (MGP_CAROLIEiJ_G0025310) #28 MGP_CAROLIEiJ_G0025311 #29 Mrpl9 (MGP_CAROLIEiJ_G0025312) #30 Riiad1 (MGP_CAROLIEiJ_G0025313) #31 Celf3 (MGP_CAROLIEiJ_G0025314) #32 Snx27 (MGP_CAROLIEiJ_G0025315) #33 Tuft1 (MGP_CAROLIEiJ_G0025316) #34 MGP_CAROLIEiJ_G0025317 MGP_CAROLIEiJ_G0025318 #35 Shrew mouse MODERN SPECIES 17 Kprp (MGP_PahariEiJ_G0026730) Lce1l (MGP_PahariEiJ_G0026731) 2310050C09Rik (MGP_PahariEiJ_G0026732) MGP_PahariEiJ_G0026733 MGP_PahariEiJ_G0026734 MGP_PahariEiJ_G0026735 MGP_PahariEiJ_G0026736 MGP_PahariEiJ_G0026737 MGP_PahariEiJ_G0026738 Crct1 (MGP_PahariEiJ_G0026739) Lce1m (MGP_PahariEiJ_G0026740) Crnn (MGP_PahariEiJ_G0026741) #16 MGP_PahariEiJ_G0026742 #17 MGP_PahariEiJ_G0026744 Tchhl1 (MGP_PahariEiJ_G0026745) #21 S100a11 (MGP_PahariEiJ_G0026746) #22 S100a10 (MGP_PahariEiJ_G0026747) ##23 Them4 (MGP_PahariEiJ_G0026748) #24 Them5 (MGP_PahariEiJ_G0026749) #25 C2cd4d (MGP_PahariEiJ_G0026750) Rorc (MGP_PahariEiJ_G0026751) #26 Lingo4 (MGP_PahariEiJ_G0026752) #27 Tdrkh (MGP_PahariEiJ_G0026753) #28 MGP_PahariEiJ_G0026754 #29 Mrpl9 (MGP_PahariEiJ_G0026755) #30 MGP_PahariEiJ_G0026756 #31 Celf3 (MGP_PahariEiJ_G0026757) #32 Snx27 (MGP_PahariEiJ_G0026758) #33 Tuft1 (MGP_PahariEiJ_G0026759) #34 MGP_PahariEiJ_G0026760 #35 Pogz (MGP_PahariEiJ_G0026761) #36 Upper Galilee mountains blind mole rat MODERN SPECIES 593 ENSNGAG00000015477 #19 S100a11 (ENSNGAG00000016757) #22 S100a10 (ENSNGAG00000011461) ##23 Them4 (ENSNGAG00000012370) #24 Them5 (ENSNGAG00000013042) #25 C2cd4d (ENSNGAG00000013377) Rorc (ENSNGAG00000016436) #26 Lingo4 (ENSNGAG00000016843) #27 Tdrkh (ENSNGAG00000017825) #28 Oaz3 (ENSNGAG00000019961) #29 Mrpl9 (ENSNGAG00000010578) #30 Riiad1 (ENSNGAG00000017842) #31 Celf3 (ENSNGAG00000021612) #32 Snx27 (ENSNGAG00000013411) #33 Tuft1 (ENSNGAG00000016432) #34 ENSNGAG00000012043 #35 Pogz (ENSNGAG00000006487) #36 Rodentia_A ANCESTRAL SPECIES ENSGT00940000164168 ENSGT01050000246051 ENSGT01020000230889 ENSGT00780000122937 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000163498 #15 ENSGT00940000163905 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000170498 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000162698 #35 Hystricomorpha ANCESTRAL SPECIES 131 ENSGT00940000154172 #22 ENSGT00940000154197.a.a.c.a #23 Hystricomorpha_a ANCESTRAL SPECIES 59 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000162657 ENSGT00700000104637 ENSGT00730000111592 ENSGT00940000163248.h.a ENSGT00940000165746 ENSGT00730000111554 ENSGT00940000161842.a ENSGT00940000169512 #14 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000163498 #15 ENSGT00940000162465 #16 ENSGT00940000154467.a #19 ENSGT00940000154172 #22 ENSGT00940000154197.a.a.c.a #23 ENSGT00940000154197.a.a.d #23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B Hystricomorpha_b ANCESTRAL SPECIES 79 ENSGT00940000162465 #16 ENSGT00940000154467.a #19 ENSGT00940000154172 #22 ENSGT00940000154197.a.a.c.a.b.b #23 ENSGT00940000154197.a.a.c.a.a #23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 116 TTC39C (ENSODEG00000005358) ENSODEG00000019156 ENSODEG00000004432 ENSODEG00000004783 ENSODEG00000004896 NPC1 (ENSODEG00000005163) RMC1 (ENSODEG00000006450) RIOK3 (ENSODEG00000006444) TMEM241 (ENSODEG00000005697) CABLES1 (ENSODEG00000004628) ENSODEG00000005244 GATA6 (ENSODEG00000004956) MIB1 (ENSODEG00000005087) ABHD3 (ENSODEG00000005394) SNRPD1 (ENSODEG00000005764) ENSODEG00000019279 #22 ENSODEG00000004902 GREB1L (ENSODEG00000006122) ROCK1 (ENSODEG00000006532) ENSODEG00000005831 THOC1 (ENSODEG00000006623) ENSODEG00000019254 COLEC12 (ENSODEG00000007701) CETN1 (ENSODEG00000019340) ENSODEG00000006402 ENOSF1 (ENSODEG00000005113) YES1 (ENSODEG00000005726) ADCYAP1 (ENSODEG00000007089) ENSODEG00000007303 ENSODEG00000019310 METTL4 (ENSODEG00000006068) Degu MODERN SPECIES 89 PGLYRP4 (ENSODEG00000010627) PGLYRP3 (ENSODEG00000009237) ENSODEG00000008993 ENSODEG00000019689 ENSODEG00000019719 ENSODEG00000012331 ENSODEG00000019776 KPRP (ENSODEG00000009720) ENSODEG00000019631 #14 C1orf68 (ENSODEG00000009558) ENSODEG00000019920 ENSODEG00000010353 ENSODEG00000009304 ENSODEG00000009112 ENSODEG00000019709 ENSODEG00000009608 #22 ENSODEG00000009939 #23 THEM4 (ENSODEG00000010154) #24 THEM5 (ENSODEG00000009312) #25 C2CD4D (ENSODEG00000010767) ENSODEG00000009680 RORC (ENSODEG00000010665) #26 LINGO4 (ENSODEG00000009935) #27 ENSODEG00000009532 #28 OAZ3 (ENSODEG00000010337) #29 MRPL9 (ENSODEG00000010962) #30 RIIAD1 (ENSODEG00000010181) #31 CELF3 (ENSODEG00000010505) #32 SNX27 (ENSODEG00000011216) #33 ENSODEG00000019964 TUFT1 (ENSODEG00000012013) #34 Degu DUPLICATION Degu MODERN SPECIES 232 ENSODEG00000018731 YTHDC1 (ENSODEG00000001715) TMPRSS11E (ENSODEG00000001785) ENSODEG00000001810 TMPRSS11F (ENSODEG00000001850) ENSODEG00000001889 ENSODEG00000000463 TMPRSS11A (ENSODEG00000000664) TMPRSS11D (ENSODEG00000000684) GNRHR (ENSODEG00000000710) UBA6 (ENSODEG00000000801) STAP1 (ENSODEG00000001048) ENSODEG00000001074 ENSODEG00000001104 #22 ENSODEG00000001143 EPHA5 (ENSODEG00000001548) ENSODEG00000018896 ENSODEG00000003448 Degu MODERN SPECIES 133 ENSODEG00000015161 ENSODEG00000020184 ENSODEG00000020101 LUZP1 (ENSODEG00000014336) KDM1A (ENSODEG00000014755) ENSODEG00000014466 ENSODEG00000014173 LACTBL1 (ENSODEG00000014475) EPHB2 (ENSODEG00000015223) ENSODEG00000020286 C1QB (ENSODEG00000015143) C1QC (ENSODEG00000015249) C1QA (ENSODEG00000016110) EPHA8 (ENSODEG00000014623) ZBTB40 (ENSODEG00000015208) ENSODEG00000016237 #22 ENSODEG00000020316 ENSODEG00000014387 WNT4 (ENSODEG00000014777) CDC42 (ENSODEG00000015760) ENSODEG00000014833 ENSODEG00000014468 ENSODEG00000014629 HSPG2 (ENSODEG00000015394) ENSODEG00000014605 USP48 (ENSODEG00000015315) RAP1GAP (ENSODEG00000015689) ALPL (ENSODEG00000014674) ECE1 (ENSODEG00000016105) ENSODEG00000015534 ENSODEG00000014814 Degu MODERN SPECIES 146 ENSODEG00000007172 TNFAIP8L3 (ENSODEG00000006955) CYP19A1 (ENSODEG00000007934) GLDN (ENSODEG00000010063) ENSODEG00000019746 DMXL2 (ENSODEG00000007956) SCG3 (ENSODEG00000008588) LYSMD2 (ENSODEG00000007006) TMOD2 (ENSODEG00000008645) TMOD3 (ENSODEG00000006720) LEO1 (ENSODEG00000008095) ENSODEG00000007404 GNB5 (ENSODEG00000006055) MYO5C (ENSODEG00000005941) MYO5A (ENSODEG00000008230) ENSODEG00000019439 #22 ENSODEG00000005366 ATOSA (ENSODEG00000007975) ONECUT1 (ENSODEG00000007415) ENSODEG00000006149 ENSODEG00000019275 ENSODEG00000006126 RSL24D1 (ENSODEG00000005430) RAB27A (ENSODEG00000006284) PIGB (ENSODEG00000006748) CCPG1 (ENSODEG00000007737) PIERCE2 (ENSODEG00000007192) DNAAF4 (ENSODEG00000007101) PYGO1 (ENSODEG00000005615) ENSODEG00000007713 PRTG (ENSODEG00000006148) Degu MODERN SPECIES 291 ENSODEG00000001913 ENSODEG00000001956 CD247 (ENSODEG00000002005) CREG1 (ENSODEG00000002026) RCSD1 (ENSODEG00000002064) MPZL1 (ENSODEG00000002143) ENSODEG00000018781 ADCY10 (ENSODEG00000002246) ENSODEG00000001149 DCAF6 (ENSODEG00000001207) GPR161 (ENSODEG00000001359) ENSODEG00000001396 ENSODEG00000001403 SFT2D2 (ENSODEG00000001437) TBX19 (ENSODEG00000001542) ENSODEG00000018697 #22 ENSODEG00000001554 DPT (ENSODEG00000001574) ATP1B1 (ENSODEG00000001596) Long-tailed chinchilla MODERN SPECIES 296 CRNN (ENSCLAG00000000319) #16 ENSCLAG00000000326 #19 S100A11 (ENSCLAG00000000334) #22 ENSCLAG00000000361 #23 ENSCLAG00000000368 THEM4 (ENSCLAG00000000400) #24 THEM5 (ENSCLAG00000000481) #25 RORC (ENSCLAG00000000624) #26 LINGO4 (ENSCLAG00000000770) #27 TDRKH (ENSCLAG00000001088) #28 ENSCLAG00000000442 #29 MRPL9 (ENSCLAG00000000458) #30 CELF3 (ENSCLAG00000000586) #32 SNX27 (ENSCLAG00000000162) #33 TUFT1 (ENSCLAG00000000570) #34 CGN (ENSCLAG00000000672) POGZ (ENSCLAG00000001558) #36 PSMB4 (ENSCLAG00000001775) Guinea pig MODERN SPECIES 2 ENSCPOG00000033053 ENSCPOG00000030235 ENSCPOG00000037041 ENSCPOG00000030043 ENSCPOG00000030563 ENSCPOG00000033173 ENSCPOG00000032596 ENSCPOG00000035955 ENSCPOG00000030264 ENSCPOG00000040656 ENSCPOG00000032513 ENSCPOG00000039783 ENSCPOG00000034456 #14 ENSCPOG00000027424 ENSCPOG00000021328 ##19 S100A11 (ENSCPOG00000009745) #22 ENSCPOG00000033136 #23 THEM4 (ENSCPOG00000000143) #24 THEM5 (ENSCPOG00000001050) #25 C2CD4D (ENSCPOG00000031360) RORC (ENSCPOG00000023600) #26 LINGO4 (ENSCPOG00000003563) #27 TDRKH (ENSCPOG00000003556) #28 OAZ3 (ENSCPOG00000003550) #29 MRPL9 (ENSCPOG00000021168) #30 CELF3 (ENSCPOG00000003539) #32 SNX27 (ENSCPOG00000007869) #33 TUFT1 (ENSCPOG00000007866) #34 CGN (ENSCPOG00000023121) POGZ (ENSCPOG00000015210) #36 PSMB4 (ENSCPOG00000015209) Naked mole-rat female MODERN SPECIES 10 SELENBP1 (ENSHGLG00000017449) PSMB4 (ENSHGLG00000011939) POGZ (ENSHGLG00000008750) #36 ENSHGLG00000011542 #35 TUFT1 (ENSHGLG00000014891) #34 SNX27 (ENSHGLG00000004841) #33 ENSHGLG00000006045 #32 ENSHGLG00000041725 #32 RIIAD1 (ENSHGLG00000009105) #31 MRPL9 (ENSHGLG00000044925) #30 OAZ3 (ENSHGLG00000048260) #29 TDRKH (ENSHGLG00000007478) #28 LINGO4 (ENSHGLG00000044939) #27 RORC (ENSHGLG00000012884) #26 ENSHGLG00000011973 #25 ENSHGLG00000013312 #22 ENSHGLG00000040771 ##23 ENSHGLG00000015316 #24 ENSHGLG00000034971 #21 ENSHGLG00000045102 ENSHGLG00000037105 #20 ENSHGLG00000015383 #19 ENSHGLG00000042729 ##19 ENSHGLG00000040052 ENSHGLG00000035954 ENSHGLG00000048818 #17 ENSHGLG00000038619 #16 ENSHGLG00000042654 ENSHGLG00000041296 ENSHGLG00000045394 ENSHGLG00000050625 Sciuridae ANCESTRAL SPECIES ENSGT01050000246051 ENSGT01020000230889 ENSGT00780000122937 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000163498 #15 ENSGT00940000163905 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.b #17 ENSGT00940000170498.a ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000162698 #35 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES ENSSVLG00005009378 ENSSVLG00005009364 ENSSVLG00005009341 ENSSVLG00005009331 ENSSVLG00005009194 #15 ENSSVLG00005003674 ENSSVLG00005003667 CRNN (ENSSVLG00005003616) #16 ENSSVLG00005003594 #17 ENSSVLG00005003582 ENSSVLG00005003567 ENSSVLG00005003502 HRNR (ENSSVLG00005003432) ##19 ENSSVLG00005003410 #19 ENSSVLG00005003377 #20 ENSSVLG00005003358 #22 ENSSVLG00005003347 #22 S100A10 (ENSSVLG00005003336) ##23 THEM4 (ENSSVLG00005003315) #24 THEM5 (ENSSVLG00005003303) #25 C2CD4D (ENSSVLG00005003299) RORC (ENSSVLG00005003240) #26 LINGO4 (ENSSVLG00005003205) #27 TDRKH (ENSSVLG00005003148) #28 OAZ3 (ENSSVLG00005003077) #29 ENSSVLG00005003027 #30 RIIAD1 (ENSSVLG00005002999) #31 CELF3 (ENSSVLG00005002946) #32 SNX27 (ENSSVLG00005002849) #33 TUFT1 (ENSSVLG00005002739) #34 CGN (ENSSVLG00005002674) Eurasian red squirrel MODERN SPECIES ENSSVLG00005009364 ENSSVLG00005009341 ENSSVLG00005009331 ENSSVLG00005009194 #15 ENSSVLG00005003674 ENSSVLG00005003667 CRNN (ENSSVLG00005003616) #16 ENSSVLG00005003594 #17 ENSSVLG00005003582 ENSSVLG00005003567 ENSSVLG00005003502 HRNR (ENSSVLG00005003432) ##19 ENSSVLG00005003410 #19 ENSSVLG00005003377 #20 ENSSVLG00005003358 #22 ENSSVLG00005003347 #22 S100A10 (ENSSVLG00005003336) ##23 THEM4 (ENSSVLG00005003315) #24 THEM5 (ENSSVLG00005003303) #25 C2CD4D (ENSSVLG00005003299) RORC (ENSSVLG00005003240) #26 LINGO4 (ENSSVLG00005003205) #27 TDRKH (ENSSVLG00005003148) #28 OAZ3 (ENSSVLG00005003077) #29 ENSSVLG00005003027 #30 RIIAD1 (ENSSVLG00005002999) #31 CELF3 (ENSSVLG00005002946) #32 SNX27 (ENSSVLG00005002849) #33 TUFT1 (ENSSVLG00005002739) #34 CGN (ENSSVLG00005002674) POGZ (ENSSVLG00005002594) #36 Marmotini ANCESTRAL SPECIES 33 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00940000163629 ENSGT00910000144375 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000162657 ENSGT00940000163019.a ENSGT00940000162465 #16 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154467.a #19 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Alpin marmot MODERN SPECIES 85 ENSMMMG00000018184 ENSMMMG00000018192 ENSMMMG00000018196 ENSMMMG00000018197 LCE7A (ENSMMMG00000018216) C1orf68 (ENSMMMG00000018221) ENSMMMG00000018223 ENSMMMG00000018241 LCE5A (ENSMMMG00000018245) ENSMMMG00000018247 ENSMMMG00000018264 #17 ENSMMMG00000018274 ENSMMMG00000018282 ##19 ENSMMMG00000018292 ##19 RPTN (ENSMMMG00000018298) #19 S100A11 (ENSMMMG00000018305) #22 S100A10 (ENSMMMG00000018313) ##23 THEM4 (ENSMMMG00000018374) #24 THEM5 (ENSMMMG00000018379) #25 RORC (ENSMMMG00000018387) #26 LINGO4 (ENSMMMG00000018432) #27 TDRKH (ENSMMMG00000018437) #28 OAZ3 (ENSMMMG00000018483) #29 ENSMMMG00000018501 #30 CELF3 (ENSMMMG00000018558) #32 SNX27 (ENSMMMG00000018570) #33 TUFT1 (ENSMMMG00000018579) #34 ENSMMMG00000018638 POGZ (ENSMMMG00000018654) #36 PSMB4 (ENSMMMG00000018764) SELENBP1 (ENSMMMG00000018768) Marmotini_b ANCESTRAL SPECIES 77 ENSGT00940000162465 #16 ENSGT00940000154467.b.b.a #18 ENSGT00940000154467.b.a ##19 ENSGT00940000154172 #22 ENSGT00940000154197.b.b ##23 ENSGT00940000160047 #24 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Arctic ground squirrel MODERN SPECIES 298 CRNN (ENSUPAG00010004975) #16 ENSUPAG00010004964 #18 ENSUPAG00010004956 ##19 S100A11 (ENSUPAG00010004949) #22 ENSUPAG00010004940 THEM4 (ENSUPAG00010004934) #24 THEM5 (ENSUPAG00010004930) #25 C2CD4D (ENSUPAG00010004925) RORC (ENSUPAG00010004882) #26 LINGO4 (ENSUPAG00010004877) #27 TDRKH (ENSUPAG00010004818) #28 OAZ3 (ENSUPAG00010004801) #29 MRPL9 (ENSUPAG00010004792) #30 RIIAD1 (ENSUPAG00010004783) #31 CELF3 (ENSUPAG00010004738) #32 SNX27 (ENSUPAG00010004681) #33 TUFT1 (ENSUPAG00010004591) #34 ENSUPAG00010004578 POGZ (ENSUPAG00010004470) #36 Squirrel MODERN SPECIES 141 ABCA5 (ENSSTOG00000020837) ABCA6 (ENSSTOG00000013286) ABCA9 (ENSSTOG00000010793) FAM20A (ENSSTOG00000028525) PRKAR1A (ENSSTOG00000012903) WIPI1 (ENSSTOG00000003127) ARSG (ENSSTOG00000003119) SLC16A6 (ENSSTOG00000027530) AMZ2 (ENSSTOG00000021098) ENSSTOG00000023386 #22 GNA13 (ENSSTOG00000001770) RGS9 (ENSSTOG00000023798) AXIN2 (ENSSTOG00000024957) CEP112 (ENSSTOG00000007220) APOH (ENSSTOG00000026343) PRKCA (ENSSTOG00000003118) CACNG5 (ENSSTOG00000006149) CACNG4 (ENSSTOG00000009282) CACNG1 (ENSSTOG00000007809) HELZ (ENSSTOG00000007818) PSMD12 (ENSSTOG00000003673) PITPNC1 (ENSSTOG00000003688) NOL11 (ENSSTOG00000003704) BPTF (ENSSTOG00000013363) ENSSTOG00000027925 Marsupialia ANCESTRAL SPECIES 2 ENSGT00390000007247 ENSGT01100000263482.D ENSGT01100000263482.C.c.b.a.b.a.b ENSGT01100000263482.C.c.b.a.a ENSGT01100000263482.C.c.b.a.b.a.a ENSGT01100000263482.C.c.a.b ENSGT01100000263482.C.c.a.a ENSGT00390000016675 ENSGT00940000153818.a.b.a.b ENSGT00940000162465 #16 ENSGT00940000154467.b.b.a.a.b #18 ENSGT00940000154467.b.b.a.a.a.b #18 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197 #23 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00390000007247 ENSGT01100000263482.D ENSGT01100000263482.C.c.b.a.b.a.b ENSGT01100000263482.C.c.b.a.a ENSGT01100000263482.C.c.b.a.b.a.a ENSGT01100000263482.C.c.a.b ENSGT01100000263482.C.c.a.a ENSGT00390000016675 ENSGT00940000153818.a.b.a.b ENSGT00940000162465 #16 ENSGT00940000154467.b.b.a.a.b #18 ENSGT00940000154467.b.b.a.a.a.b #18 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000162966 #21 ENSGT00940000154172 #22 ENSGT00940000154197 #23 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 Diprotodontia ANCESTRAL SPECIES 5 ENSGT00940000159596 ENSGT00940000156438 ENSGT00390000007247 ENSGT01100000263482.D ENSGT01100000263482.C.c.b.a.b.a.b ENSGT01100000263482.C.c.b.a.a ENSGT01100000263482.C.c.b.a.b.a.a ENSGT01100000263482.C.c.a.b ENSGT01100000263482.C.c.a.a ENSGT00390000016675 ENSGT00940000153818.a.b.a.b ENSGT00940000162465 #16 ENSGT00940000154467.b.b.a.a.a.b #18 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000154172 #22 ENSGT00940000154197 #23 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 Diprotodontia_a DUPLICATION Diprotodontia_a ANCESTRAL SPECIES 6 ENSGT00940000156438 ENSGT00390000007247 ENSGT01100000263482.D ENSGT01100000263482.C.c.b.a.b.a.b ENSGT01100000263482.C.c.b.a.a ENSGT01100000263482.C.c.b.a.b.a.a ENSGT01100000263482.C.c.a.b ENSGT01100000263482.C.c.a.a ENSGT00970000198103 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b ENSGT00940000162465 #16 ENSGT00940000154467.b.b.a.a.a.b #18 ENSGT00940000154467.a #19 ENSGT00940000163983 #20 ENSGT00940000154172.c #22 ENSGT00940000154197 #23 ENSGT00940000161937 #25 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281.g #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1007 ENSVURG00010012517 ENSVURG00010012622 ENSVURG00010012627 ENSVURG00010012645 ENSVURG00010012661 ENSVURG00010012668 ENSVURG00010012682 ENSVURG00010012701 ENSVURG00010012706 ENSVURG00010012788 ENSVURG00010013938 ENSVURG00010013966 ENSVURG00010013974 #18 ENSVURG00010013981 #19 ENSVURG00010013988 ENSVURG00010013992 #22 ENSVURG00010013994 #23 ENSVURG00010014002 #25 ENSVURG00010014005 ENSVURG00010014012 #26 ENSVURG00010014033 #27 ENSVURG00010014037 #28 ENSVURG00010014057 #29 ENSVURG00010014084 #30 ENSVURG00010014095 #31 ENSVURG00010014109 #32 ENSVURG00010014141 #33 ENSVURG00010014178 #34 ENSVURG00010014229 #35 ENSVURG00010014273 #36 ENSVURG00010014303 Common wonbat MODERN SPECIES 1007 ENSVURG00010015947 ENSVURG00010015955 ENSVURG00010015981 ENSVURG00010015996 ENSVURG00010016004 ENSVURG00010016008 ENSVURG00010016074 ENSVURG00010017226 ENSVURG00010017283 ENSVURG00010017302 ENSVURG00010017305 #16 ENSVURG00010017315 #18 ENSVURG00010017327 #19 ENSVURG00010017331 #20 ENSVURG00010017337 ENSVURG00010017345 #22 ENSVURG00010017350 #23 ENSVURG00010017382 #25 ENSVURG00010017391 ENSVURG00010017396 #26 ENSVURG00010017408 #27 ENSVURG00010017411 #28 ENSVURG00010017418 #29 ENSVURG00010017427 #30 ENSVURG00010017437 #31 ENSVURG00010017456 #32 ENSVURG00010017588 #33 ENSVURG00010018681 #34 ENSVURG00010018703 #35 ENSVURG00010018723 #36 ENSVURG00010018746 koala MODERN SPECIES 4 ENSPCIG00000036427 ENSPCIG00000003798 ENSPCIG00000003810 ENSPCIG00000026474 ENSPCIG00000026475 ENSPCIG00000026476 HEATR6 (ENSPCIG00000026477) HNF1B (ENSPCIG00000030619) ENSPCIG00000033989 ENSPCIG00000034047 ENSPCIG00000032403 ENSPCIG00000004253 #16 ENSPCIG00000005507 #18 ENSPCIG00000010063 ENSPCIG00000010780 #19 ENSPCIG00000033593 #22 S100A10 (ENSPCIG00000034404) #23 THEM5 (ENSPCIG00000021241) #25 C2CD4D (ENSPCIG00000021238) RORC (ENSPCIG00000021210) #26 LINGO4 (ENSPCIG00000021207) #27 TDRKH (ENSPCIG00000021201) #28 OAZ3 (ENSPCIG00000021199) #29 ENSPCIG00000021194 #30 ENSPCIG00000037088 #31 CELF3 (ENSPCIG00000021190) #32 SNX27 (ENSPCIG00000021183) #33 TUFT1 (ENSPCIG00000021175) #34 ENSPCIG00000021171 #35 POGZ (ENSPCIG00000021163) #36 PSMB4 (ENSPCIG00000021158) Diprotodontia_a ANCESTRAL SPECIES ENSGT00940000154172.d #22 koala MODERN SPECIES 12 ENSPCIG00000029410 DISP1 (ENSPCIG00000029409) TLR5 (ENSPCIG00000029412) SUSD4 (ENSPCIG00000033276) ENSPCIG00000016889 ENSPCIG00000016425 CAPN2 (ENSPCIG00000016896) TP53BP2 (ENSPCIG00000016901) FBXO28 (ENSPCIG00000016902) DEGS1 (ENSPCIG00000016903) NVL (ENSPCIG00000016904) ENSPCIG00000031021 ENSPCIG00000016909 WDR26 (ENSPCIG00000016910) CNIH3 (ENSPCIG00000016913) ENSPCIG00000016915 #22 ENSPCIG00000016922 ENSPCIG00000016927 LBR (ENSPCIG00000016938) ENAH (ENSPCIG00000017396) SRP9 (ENSPCIG00000017399) EPHX1 (ENSPCIG00000017401) TMEM63A (ENSPCIG00000017422) ENSPCIG00000017425 ENSPCIG00000017431 ENSPCIG00000017464 SDE2 (ENSPCIG00000017466) ENSPCIG00000017467 ACBD3 (ENSPCIG00000017469) MIXL1 (ENSPCIG00000033591) LIN9 (ENSPCIG00000017472) Tasmanian devil MODERN SPECIES 3 ENSSHAG00000026107 ENSSHAG00000027973 ENSSHAG00000021920 ENSSHAG00000024962 ENSSHAG00000007744 ENSSHAG00000005052 ENSSHAG00000022281 ENSSHAG00000024372 #16 ENSSHAG00000029525 #18 ENSSHAG00000026660 #18 ENSSHAG00000020734 #18 ENSSHAG00000021376 ENSSHAG00000016722 #19 ENSSHAG00000031502 #20 ENSSHAG00000016584 #21 S100A11 (ENSSHAG00000023473) #22 S100A10 (ENSSHAG00000023159) #23 C2CD4D (ENSSHAG00000016081) RORC (ENSSHAG00000015984) #26 TDRKH (ENSSHAG00000015859) #28 LINGO4 (ENSSHAG00000022437) #27 OAZ3 (ENSSHAG00000015841) #29 MRPL9 (ENSSHAG00000026598) #30 ENSSHAG00000024960 #31 CELF3 (ENSSHAG00000015744) #32 SNX27 (ENSSHAG00000015572) #33 TUFT1 (ENSSHAG00000025042) #34 ENSSHAG00000015207 #35 POGZ (ENSSHAG00000014743) #36 PSMB4 (ENSSHAG00000014719) SELENBP1 (ENSSHAG00000014447) Opossum MODERN SPECIES 1 ENSMODG00000028688 ENSMODG00000028122 ENSMODG00000019120 ENSMODG00000019114 ENSMODG00000025694 ENSMODG00000019113 HEATR6 (ENSMODG00000019111) HNF1B (ENSMODG00000019108) ENSMODG00000047438 ENSMODG00000023202 ENSMODG00000019101 #16 ENSMODG00000025693 #18 ENSMODG00000019097 #18 ENSMODG00000019012 #19 ENSMODG00000018966 S100A11 (ENSMODG00000018920) #22 S100A10 (ENSMODG00000046156) #23 ENSMODG00000018917 #25 C2CD4D (ENSMODG00000027860) RORC (ENSMODG00000018911) #26 TDRKH (ENSMODG00000018906) #28 OAZ3 (ENSMODG00000018904) #29 MRPL9 (ENSMODG00000046753) #30 RIIAD1 (ENSMODG00000039252) #31 CELF3 (ENSMODG00000027673) #32 SNX27 (ENSMODG00000018893) #33 TUFT1 (ENSMODG00000047337) #34 ENSMODG00000018879 #35 POGZ (ENSMODG00000018875) #36 PSMB4 (ENSMODG00000018871) SELENBP1 (ENSMODG00000018869) Sauria ANCESTRAL SPECIES 28 ENSGT00940000161854 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000161276.A ENSGT00940000161276.B ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00940000162189 ENSGT00940000161006.k ENSGT01030000235377 ENSGT00940000162465 #16 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000154197 #23 ENSGT00940000160047 #24 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000154996.a.a ENSGT00940000165314 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000162698 #35 Archelosauria ANCESTRAL SPECIES 27 ENSGT00390000000920 ENSGT00940000161276.A ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.B ENSGT00940000161986 ENSGT00940000161896 ENSGT00960000189338 ENSGT00960000189301 ENSGT00940000162189 ENSGT00940000161006.k ENSGT01030000235377 ENSGT00960000189315 ENSGT01090000260232 ENSGT01060000249291 ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b ENSGT01030000234540.B.a.a ENSGT01030000234540.D ENSGT00940000155795 ENSGT01030000234540.B.b ENSGT00940000160963 ENSGT00940000162271 ENSGT00940000158350 ENSGT00440000034367 ENSGT00940000154225.a ENSGT00940000159412 ENSGT00940000160437 Cryptodira ANCESTRAL SPECIES 20 ENSGT00390000000920 ENSGT00940000161276.A ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.B ENSGT00940000161986 ENSGT00940000161896 ENSGT00960000189338 ENSGT00940000162189 ENSGT00940000161006.k ENSGT01030000235377 ENSGT00960000189315 ENSGT01090000260232 ENSGT01060000249291.a ENSGT01060000249291.b.b ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b ENSGT01030000234540.B.a.a.d.b.a ENSGT01030000234540.D ENSGT00940000155795 ENSGT01030000234540.B.b.d ENSGT01030000234540.B.b.c ENSGT00940000160963 ENSGT00940000162271 ENSGT00940000158350 ENSGT00440000034367 ENSGT00940000154225.a ENSGT00940000159412 Testudinoidea ANCESTRAL SPECIES 17 ENSGT00940000161006.k ENSGT01030000235377 ENSGT00960000189315 ENSGT01010000227455 ENSGT00950000185545 ENSGT01030000234722.b.a.a.a.a ENSGT01030000234722.a.c.a.a ENSGT01030000234722.b.a.a.a.b.b ENSGT01030000234776.C.f.a ENSGT01030000234776.C.g ENSGT01050000245140.a.b ENSGT01030000234722.b.a.a.a.b.a ENSGT01090000260232 ENSGT01060000249291.a ENSGT01060000249291.b.a ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b ENSGT01030000234540.B.a.a.d.b.a.a.b ENSGT01030000234540.B.a.a.c.b ENSGT01030000234540.D ENSGT01030000234540.B.a.a.d.b.a.a.a ENSGT01030000234540.B.a.a.d.b.b ENSGT00940000155795 ENSGT01030000234540.B.b.d.a ENSGT00940000160963 ENSGT00940000162271 ENSGT00940000158350 ENSGT00440000034367 Emydidae ANCESTRAL SPECIES 18 ENSGT00940000162189 ENSGT00940000161006.k ENSGT01030000235377 ENSGT01010000227455 ENSGT00950000185545 ENSGT01030000234722.b.a.a.a.a ENSGT01030000234722.a.c.a.a ENSGT01030000234722.b.a.b ENSGT01030000234776.C.f.a.a ENSGT01030000234776.C.g ENSGT01050000245140.a.b ENSGT01030000234722.b.a.a.a.b.a ENSGT01090000260232 ENSGT01060000249291.a ENSGT01060000249291.b.a ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b ENSGT01030000234540.B.a.a.d.b.a.a.b ENSGT01030000234540.B.a.a.c.b ENSGT01030000234540.B.a.a.d.b.a.a.a ENSGT01030000234540.B.a.a.d.b.b ENSGT00940000155795 ENSGT01030000234540.B.b.d.b ENSGT01030000234540.B.b.c ENSGT01030000234540.B.b.d.a ENSGT00940000160963 ENSGT00940000162271 ENSGT00940000158350 painted turtle MODERN SPECIES 785 ENSCPBG00000025437 ENSCPBG00000025438 ENSCPBG00000025440 ENSCPBG00000025441 ENSCPBG00000025442 ENSCPBG00000025443 ENSCPBG00000025444 ENSCPBG00000025445 ENSCPBG00000025446 ENSCPBG00000025447 ENSCPBG00000025449 ENSCPBG00000025450 ENSCPBG00000025451 ENSCPBG00000025453 ENSCPBG00000025454 S100A11 (ENSCPBG00000025455) #22 COPA (ENSCPBG00000025456) NCSTN (ENSCPBG00000025459) NHLH1 (ENSCPBG00000025626) VANGL2 (ENSCPBG00000025627) ADAM15 (ENSCPBG00000025629) ENSCPBG00000025632 ENSCPBG00000025634 ZBTB7B (ENSCPBG00000025637) ENSCPBG00000025642 ENSCPBG00000025644 FLAD1 (ENSCPBG00000025645) SHC1 (ENSCPBG00000025647) CKS1B (ENSCPBG00000025650) PYGO2 (ENSCPBG00000025651) ENSCPBG00000025655 Three-toed box turtle MODERN SPECIES 102 ENSTMTG00000018514 ENSTMTG00000018529 S100A11 (ENSTMTG00000018540) #22 COPA (ENSTMTG00000018564) NCSTN (ENSTMTG00000018614) NHLH1 (ENSTMTG00000018650) VANGL2 (ENSTMTG00000018659) ENSTMTG00000018669 ENSTMTG00000018683 KIRREL1 (ENSTMTG00000018718) ENSTMTG00000018861 ENSTMTG00000018883 ENSTMTG00000018894 ETV3 (ENSTMTG00000018908) ETV3L (ENSTMTG00000018921) ARHGEF11 (ENSTMTG00000019068) LRRC71 (ENSTMTG00000020459) ENSTMTG00000020473 Testudinidae ANCESTRAL SPECIES 3 ENSGT01030000235377 ENSGT00960000189315 ENSGT01010000227455 ENSGT00950000185545 ENSGT01030000234722.b.a.a.a.a ENSGT01030000234722.b.a.a.a.b.b ENSGT01030000234776.C.f.a ENSGT01030000234776.C.g ENSGT01050000245140.a.b ENSGT01030000234776.A ENSGT01030000234722.b.a.a.a.b.a ENSGT01090000260232 ENSGT01060000249291.a ENSGT01060000249291.b.a ENSGT01060000249291.b.b ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b ENSGT01030000234540.B.a.a.d.b.a.a.b ENSGT01030000234540.B.a.a.c.b ENSGT01030000234540.B.a.a.d.b.a.a.a.a ENSGT01030000234540.D ENSGT01030000234540.A.a.a.d ENSGT01030000234540.B.a.a.d.b.a.a.a.b ENSGT01030000234540.B.a.a.d.b.b ENSGT00940000155795 ENSGT01030000234540.B.b.d.a.a ENSGT00940000160963 ENSGT00940000162271 Abingdon island giant tortoise MODERN SPECIES 1671 ENSCABG00000016811 ENSCABG00000016813 ENSCABG00000016816 ENSCABG00000016817 ENSCABG00000016818 S100A11 (ENSCABG00000016819) #22 COPA (ENSCABG00000016820) NCSTN (ENSCABG00000016830) NHLH1 (ENSCABG00000017469) VANGL2 (ENSCABG00000017471) ENSCABG00000017473 ENSCABG00000017475 ENSCABG00000017477 ENSCABG00000017479 ENSCABG00000017487 ENSCABG00000017496 ENSCABG00000017548 ENSCABG00000017549 ENSCABG00000017551 KIRREL1 (ENSCABG00000017554) ENSCABG00000017555 Goode s thornscrub tortoise MODERN SPECIES 16 ENSGEVG00005004652 ENSGEVG00005004667 ENSGEVG00005004699 ENSGEVG00005004720 ENSGEVG00005004735 ENSGEVG00005004749 ENSGEVG00005004775 ENSGEVG00005004792 ENSGEVG00005004820 ENSGEVG00005004843 ENSGEVG00005004860 ENSGEVG00005004882 ENSGEVG00005004904 ENSGEVG00005004919 ENSGEVG00005004934 S100A11 (ENSGEVG00005004962) #22 COPA (ENSGEVG00005004988) NCSTN (ENSGEVG00005005080) NHLH1 (ENSGEVG00005005198) VANGL2 (ENSGEVG00005005220) ENSGEVG00005005281 SLAMF1 (ENSGEVG00005005351) ENSGEVG00005005374 ENSGEVG00005005389 ENSGEVG00005005434 ENSGEVG00005005502 ENSGEVG00005005536 ENSGEVG00005005593 ENSGEVG00005005616 ENSGEVG00005005631 KIRREL1 (ENSGEVG00005005692) Archosauria ANCESTRAL SPECIES 28 ENSGT00940000162465 #16 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b ENSGT01030000234540.B.a.a ENSGT01030000234540.D ENSGT01030000234540.C ENSGT01030000234540.A.a.a ENSGT00940000155795 ENSGT01030000234540.B.b ENSGT00940000160963 ENSGT00940000162271 ENSGT00940000158350 ENSGT00440000034367 ENSGT00940000154225.a Australian saltwater crocodile MODERN SPECIES 25 ENSCPRG00005013621 ENSCPRG00005013623 ENSCPRG00005013625 ENSCPRG00005013627 ENSCPRG00005013630 ENSCPRG00005013632 ENSCPRG00005013636 ENSCPRG00005013637 ENSCPRG00005013644 ENSCPRG00005013647 ENSCPRG00005013649 ENSCPRG00005013652 ENSCPRG00005013654 ENSCPRG00005013656 ENSCPRG00005013661 S100A11 (ENSCPRG00005013665) #22 COPA (ENSCPRG00005013673) NCSTN (ENSCPRG00005013703) NHLH1 (ENSCPRG00005013725) VANGL2 (ENSCPRG00005013730) ENSCPRG00005013736 ENSCPRG00005013737 CD244 (ENSCPRG00005013740) SHE (ENSCPRG00005013742) ENSCPRG00005013744 UBE2Q1 (ENSCPRG00005013748) CHRNB2 (ENSCPRG00005013754) ADAR (ENSCPRG00005013761) ENSCPRG00005013765 KCNN3 (ENSCPRG00005013768) PMVK (ENSCPRG00005013773) Aves ANCESTRAL SPECIES 31 ENSGT01030000234722.b.a.a.a.b.d ENSGT01030000234776.C.a.b ENSGT00960000189335 ENSGT01100000264719 ENSGT00730000114393 ENSGT01090000260232 ENSGT00940000172672 ENSGT00940000162465 #16 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b ENSGT01030000234540.B.a.a ENSGT01030000234540.D ENSGT01030000234540.C ENSGT01030000234540.A.a.a ENSGT00940000155795 ENSGT01030000234540.B.b ENSGT00940000160963 ENSGT00940000162271 ENSGT00940000158350 ENSGT00440000034367 ENSGT00940000154225.a African ostrich MODERN SPECIES 616 ENSSCUG00000010031 ENSSCUG00000010029 ENSSCUG00000010028 ENSSCUG00000010025 ENSSCUG00000010023 ENSSCUG00000010022 ENSSCUG00000010021 ENSSCUG00000010018 ENSSCUG00000010016 ENSSCUG00000010014 ENSSCUG00000010013 ENSSCUG00000010011 ENSSCUG00000010010 ENSSCUG00000010007 ENSSCUG00000010003 #19 S100A11 (ENSSCUG00000009999) #22 COPA (ENSSCUG00000009990) NCSTN (ENSSCUG00000009952) NHLH1 (ENSSCUG00000009932) VANGL2 (ENSSCUG00000009931) ENSSCUG00000009928 ENSSCUG00000009927 ENSSCUG00000009925 Neognathae ANCESTRAL SPECIES 28 ENSGT00960000189316 ENSGT01030000235572 ENSGT01030000234722.b.a.a.b ENSGT00960000189342 ENSGT00960000189349 ENSGT01030000235366 ENSGT01030000234722.a.a.a.a.a.b ENSGT01030000234722.b.a.b.a.b ENSGT01030000234776.C.a.a.b ENSGT00960000189335 ENSGT00730000114393 ENSGT01090000260232 ENSGT00940000172672 ENSGT00940000162465 #16 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b ENSGT01030000234540.B.a.a ENSGT01030000234540.D ENSGT01030000234540.C ENSGT01030000234540.A.a.a ENSGT00940000155795 ENSGT01030000234540.B.b.e.a ENSGT01030000234540.B.b.e.b ENSGT00940000160963 ENSGT00940000162271 ENSGT00940000158350 ENSGT00440000034367 Galloanserae ANCESTRAL SPECIES 36 ENSGT01030000234722.b.a.b.a.b ENSGT01030000234722.b.a.b.b.e ENSGT01030000234722.b.a.b.a.a ENSGT01030000234722.b.a.a.a.b.c ENSGT01030000234776.C.a.a.a ENSGT01030000234722.b.a.a.a.b.d ENSGT01030000234776.C.a.b ENSGT01030000234776.C.a.a.b ENSGT00960000189335 ENSGT01030000237046 ENSGT00730000114393 ENSGT01090000260232 ENSGT00940000172672 ENSGT00940000162465 #16 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b ENSGT01030000234540.B.a.a ENSGT01030000234540.D ENSGT01030000234540.C ENSGT01030000234540.A.a.a ENSGT00940000155795 ENSGT01030000234540.B.b.e.a ENSGT01030000234540.B.b.e.b ENSGT00940000160963 ENSGT00940000162271 ENSGT00940000158350 ENSGT00440000034367 Anatidae ANCESTRAL SPECIES 51 ENSGT01030000234722.a.a.a.a.b ENSGT01030000234722.b.a.b.a.a ENSGT01030000234722.b.a.a.a.b.c ENSGT01030000234776.C.a.a.a ENSGT01030000234722.b.a.a.a.b.d ENSGT01030000234722.b.a.a.a.a ENSGT01030000234776.C.a.a.b ENSGT00960000189335 ENSGT01100000264719 ENSGT01030000237046 ENSGT00730000114393 ENSGT01090000260232 ENSGT00940000172672 ENSGT00940000162465 #16 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b ENSGT01030000234540.B.a.a ENSGT01030000234540.D ENSGT01030000234540.C ENSGT01030000234540.A.a.a ENSGT00940000155795 ENSGT01030000234540.B.b.e.a ENSGT01030000234540.B.b.e.b ENSGT00940000160963 Duck MODERN SPECIES 17 ENSAPLG00000029332 ENSAPLG00000024069 ENSAPLG00000022383 ENSAPLG00000025042 ENSAPLG00000020359 ENSAPLG00000025456 ENSAPLG00000024791 ENSAPLG00000029785 ENSAPLG00000023978 ENSAPLG00000025572 ENSAPLG00000000842 ENSAPLG00000019550 ENSAPLG00000022527 ENSAPLG00000031086 #16 ENSAPLG00000026701 #19 S100A11 (ENSAPLG00000013523) #22 COPA (ENSAPLG00000013799) NCSTN (ENSAPLG00000014723) VANGL2 (ENSAPLG00000024887) ENSAPLG00000017802 ENSAPLG00000015339 ENSAPLG00000029925 ENSAPLG00000025785 ENSAPLG00000009473 TUFT1 (ENSAPLG00000009480) #34 PSMB4 (ENSAPLG00000009850) POGZ (ENSAPLG00000009926) #36 ENSAPLG00000010148 ENSAPLG00000002903 RFX5 (ENSAPLG00000027459) PI4KB (ENSAPLG00000002437) Pink-footed goose MODERN SPECIES 461 S100A11 (ENSABRG00000008093) #22 COPA (ENSABRG00000008054) NCSTN (ENSABRG00000004636) NHLH1 (ENSABRG00000004370) VANGL2 (ENSABRG00000004344) ENSABRG00000004323 ENSABRG00000004296 ENSABRG00000004237 KIRREL1 (ENSABRG00000004137) ENSABRG00000004115 ENSABRG00000004098 ETV3 (ENSABRG00000004092) Phasianidae ANCESTRAL SPECIES 30 ENSGT00960000189349 ENSGT01030000234722.a.a.a.b.a.b.c.b.b ENSGT01030000234722.a.a.a.a.a.b.b ENSGT01030000234722.a.a.a.a.a.b.a ENSGT01030000234722.b.a.b.a.b.b.a ENSGT01030000234722.b.a.b.a.a ENSGT01030000234722.b.a.a.a.b.c ENSGT01030000234722.b.a.a.a.b.d ENSGT01030000234722.b.a.a.a.a ENSGT01030000234776.C.a.a.a ENSGT00960000189335 ENSGT00730000114393 ENSGT01090000260232 ENSGT00940000172672 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00940000164480.d.b ENSGT00390000012496.b ENSGT01030000234540.B.a.a ENSGT01030000234540.D ENSGT01030000234540.C ENSGT01030000234540.A.a.a ENSGT00940000155795 ENSGT01030000234540.B.b.e.a ENSGT01030000234540.B.b.e.b ENSGT00940000160963 ENSGT00940000162271 ENSGT00940000158350 Japanese quail MODERN SPECIES 17 ENSCJPG00005014080 ENSCJPG00005014079 ENSCJPG00005014078 ENSCJPG00005014077 ENSCJPG00005014076 ENSCJPG00005014075 ENSCJPG00005014074 ENSCJPG00005014073 ENSCJPG00005014071 ENSCJPG00005014070 ENSCJPG00005014068 ENSCJPG00005014067 ENSCJPG00005014066 #16 ENSCJPG00005014064 ENSCJPG00005014062 S100A11 (ENSCJPG00005014061) #22 COPA (ENSCJPG00005014055) NCSTN (ENSCJPG00005014045) ENSCJPG00005014043 VANGL2 (ENSCJPG00005014040) ENSCJPG00005014037 ENSCJPG00005014034 ENSCJPG00005014033 ENSCJPG00005014032 KIRREL1 (ENSCJPG00005014030) ENSCJPG00005014029 ENSCJPG00005014028 ETV3 (ENSCJPG00005014027) ENSCJPG00005014026 ETV3L (ENSCJPG00005014025) ARHGEF11 (ENSCJPG00005014022) Phasianidae_b ANCESTRAL SPECIES 38 ENSGT01030000234722.b.a.b.a.a ENSGT01030000234722.b.a.a.a.b.c ENSGT01030000234776.C.a.a.a ENSGT01030000234722.b.a.a.a.b.d ENSGT01030000234776.C.a.b ENSGT01030000234776.C.a.a.b ENSGT01030000234722.a.a.a.a.b ENSGT01030000234722.b.a.a.a.a ENSGT00960000189335 ENSGT00730000114393 ENSGT01090000260232 ENSGT00940000172672 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00940000164480.d.b ENSGT00390000012496.b ENSGT01030000234540.B.a.a ENSGT01030000234540.D ENSGT01030000234540.C ENSGT01030000234540.A.a.a ENSGT00940000155795 ENSGT01030000234540.B.b.e.a ENSGT01030000234540.B.b.e.b ENSGT00940000160963 ENSGT00940000162271 ENSGT00940000158350 Chicken MODERN SPECIES 17 ENSGALG00010028703 ENSGALG00010028737 ENSGALG00010027298 ENSGALG00010028713 ENSGALG00010028710 ENSGALG00010028758 ENSGALG00010028759 ENSGALG00010027772 ENSGALG00010027767 EDPE (ENSGALG00010027759) ENSGALG00010027748 EDQCM (ENSGALG00010027744) ENSGALG00010027736 CRNN (ENSGALG00010027728) ENSGALG00010027723 #19 S100A11 (ENSGALG00010027705) #22 NCSTN (ENSGALG00010027703) NHLH1 (ENSGALG00010027701) VANGL2 (ENSGALG00010027699) ENSGALG00010027685 COPA (ENSGALG00010027663) SLAMF1 (ENSGALG00010027645) CD48 (ENSGALG00010027635) ENSGALG00010027624 KIRREL (ENSGALG00010027600) ENSGALG00010027860 SLAMF8 (ENSGALG00010027842) ETV3 (ENSGALG00010028856) ENSGALG00010027834 ARHGEF11 (ENSGALG00010027826) LRRC71 (ENSGALG00010027813) Turkey MODERN SPECIES 19 ENSMGAG00000008709 ENSMGAG00000018068 ENSMGAG00000004650 ENSMGAG00000022569 ENSMGAG00000008723 ENSMGAG00000008731 ENSMGAG00000000667 ENSMGAG00000006035 ENSMGAG00000017298 ENSMGAG00000018551 ENSMGAG00000005973 ENSMGAG00000019112 ENSMGAG00000018298 ENSMGAG00000019762 ENSMGAG00000010791 ENSMGAG00000006125 #22 COPA (ENSMGAG00000006128) ENSMGAG00000006212 NHLH1 (ENSMGAG00000021934) ENSMGAG00000019611 ENSMGAG00000018534 ENSMGAG00000001206 ENSMGAG00000018866 #19 ENSMGAG00000022903 ENSMGAG00000021348 ENSMGAG00000017720 ENSMGAG00000017388 ENSMGAG00000018343 ENSMGAG00000021841 ENSMGAG00000001195 ENSMGAG00000001197 Neognathae_b ANCESTRAL SPECIES 33 ENSGT00960000189315 ENSGT00960000189340 ENSGT01040000240895 ENSGT01070000254008 ENSGT01030000234999 ENSGT00960000189316 ENSGT01030000235572 ENSGT01030000234722.b.a.a.b ENSGT00960000189342 ENSGT00960000189349 ENSGT01030000235366 ENSGT01030000234776.C.a.a.a ENSGT01090000260232 ENSGT00940000172672 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b ENSGT01030000234540.B.a.a ENSGT01030000234540.D ENSGT01030000234540.C ENSGT00940000174123 ENSGT00940000155795 ENSGT01030000234540.B.b.e.a ENSGT01030000234540.B.b.e.b ENSGT00940000160963 ENSGT00940000162271 ENSGT00940000158350 ENSGT00440000034367 Passeriformes ANCESTRAL SPECIES 36 ENSGT00960000189315 ENSGT00960000189340 ENSGT01040000240895.a ENSGT01040000240895.b ENSGT01030000234999 ENSGT00960000189316 ENSGT01030000235572 ENSGT01030000234722.b.a.a.b ENSGT00730000114393 ENSGT01030000237046 ENSGT00960000189335 ENSGT01030000234776.C.a.a.a ENSGT01090000260232 ENSGT00940000172672 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b.d ENSGT01030000234540.B.a.a ENSGT01030000234540.D ENSGT00390000012496.b.c.a ENSGT01030000234540.C ENSGT00940000174123 ENSGT00940000155795 ENSGT00940000160963.b ENSGT00940000158350 Great tit MODERN SPECIES 18 S100A16 (ENSPMJG00000001416) S100A14 (ENSPMJG00000001411) ENSPMJG00000001405 ENSPMJG00000001388 CHTOP (ENSPMJG00000001380) ENSPMJG00000001370 SNAPIN (ENSPMJG00000001353) ILF2 (ENSPMJG00000001337) ENSPMJG00000001218 ENSPMJG00000001216 ENSPMJG00000001213 ENSPMJG00000001211 ENSPMJG00000001210 ENSPMJG00000001209 ENSPMJG00000001208 S100A11 (ENSPMJG00000001172) #22 COPA (ENSPMJG00000000890) Passeriformes_d ANCESTRAL SPECIES 26 ENSGT01030000234999 ENSGT00960000189316 ENSGT01030000235572 ENSGT01030000234722.b.a.a.b ENSGT01030000234722.a.a.a.b.a.b.e.a ENSGT01030000234722.a.a.a.a.a.a.a ENSGT01030000234722.a.a.a.a.a.a.b ENSGT01030000234722.a.a.a.a.b ENSGT01030000234776.C.a.a.a ENSGT00960000189335 ENSGT01030000237046.a ENSGT00730000114393 ENSGT01090000260232 ENSGT00940000172672 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b.d ENSGT01030000234540.B.a.a ENSGT00390000012496.b.c.a ENSGT01030000234540.C ENSGT00940000174123 ENSGT00940000155795 ENSGT00940000160963.b ENSGT00940000158350 Flycatcher MODERN SPECIES 17 ENSFALG00000023017 ENSFALG00000014112 ENSFALG00000014567 ENSFALG00000023418 ENSFALG00000026003 ENSFALG00000025681 ENSFALG00000001736 ENSFALG00000025408 ENSFALG00000001731 ENSFALG00000001732 ENSFALG00000001730 ENSFALG00000024804 ENSFALG00000028052 ENSFALG00000025091 ENSFALG00000027109 ENSFALG00000001725 #22 ENSFALG00000001723 ENSFALG00000001721 ENSFALG00000007439 ENSFALG00000007436 ENSFALG00000007428 ENSFALG00000026301 NCSTN (ENSFALG00000007396) COPA (ENSFALG00000007347) ENSFALG00000023694 ENSFALG00000013676 ENSFALG00000001455 SCNM1 (ENSFALG00000001456) ENSFALG00000024671 VPS72 (ENSFALG00000025957) PIP5K1A (ENSFALG00000023948) Passeriformes_g ANCESTRAL SPECIES 27 ENSGT01030000234722.a.a.a.a.a.a.a ENSGT01030000234722.a.a.a.a.a.a.b ENSGT01030000234722.a.a.a.a.b ENSGT01030000234722.b.a.a.a.a ENSGT01030000234722.b.a.b.a.b ENSGT01030000234776.C.a.a.b.e ENSGT01030000234722.b.a.b.b ENSGT01030000234722.b.a.b.a.a ENSGT01030000234776.C.a.a.a ENSGT00960000189335 ENSGT01030000237046.a ENSGT00730000114393 ENSGT01090000260232 ENSGT00940000172672 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b.d ENSGT01030000234540.B.a.a ENSGT00390000012496.b.c.a ENSGT01030000234540.C ENSGT00940000174123 ENSGT00940000155795 ENSGT00940000160963.b ENSGT00940000158350 Passeroidea ANCESTRAL SPECIES 28 ENSGT01030000234722.a.a.a.a.a.a.a ENSGT01030000234722.a.a.a.a.a.a.b ENSGT01030000234722.a.a.a.a.b ENSGT01030000234722.b.a.a.a.a ENSGT01030000234722.b.a.b.a.b ENSGT01030000234776.C.a.a.b.e ENSGT01030000234722.b.a.b.b ENSGT01030000234722.b.a.b.a.a ENSGT01030000234776.C.a.a.a ENSGT00960000189335 ENSGT01030000237046.a ENSGT00730000114393 ENSGT01090000260232 ENSGT00940000172672 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b.d ENSGT01030000234540.B.a.a ENSGT01030000234540.C ENSGT00940000174123 ENSGT00940000155795 ENSGT00940000160963.a ENSGT00940000160963.b ENSGT00940000158350 Zebra finch MODERN SPECIES 18 ENSTGUG00000019843 ENSTGUG00000019408 ENSTGUG00000027752 ENSTGUG00000020506 ENSTGUG00000020676 ENSTGUG00000004297 ENSTGUG00000018207 ENSTGUG00000021789 ENSTGUG00000018407 ENSTGUG00000020214 ENSTGUG00000004324 ENSTGUG00000022406 ENSTGUG00000020773 ENSTGUG00000023965 ENSTGUG00000026909 #19 S100A11 (ENSTGUG00000029594) #22 COPA (ENSTGUG00000017404) NCSTN (ENSTGUG00000004337) NHLH1 (ENSTGUG00000024935) VANGL2 (ENSTGUG00000004396) ENSTGUG00000020247 ENSTGUG00000027039 ENSTGUG00000019189 KIRREL1 (ENSTGUG00000018810) ENSTGUG00000025392 ETV3 (ENSTGUG00000026543) ARHGEF11 (ENSTGUG00000017366) ENSTGUG00000025982 ENSTGUG00000019946 ENSTGUG00000017426 ENSTGUG00000023622 Common canary MODERN SPECIES 81 ENSSCAG00000011037 ENSSCAG00000011040 ENSSCAG00000011043 ENSSCAG00000011047 ENSSCAG00000011055 ENSSCAG00000011059 ENSSCAG00000011060 ENSSCAG00000011063 ENSSCAG00000011067 ENSSCAG00000011072 ENSSCAG00000011073 ENSSCAG00000011080 ENSSCAG00000011081 ENSSCAG00000011087 ENSSCAG00000011090 S100A11 (ENSSCAG00000011093) #22 ENSSCAG00000011096 COPA (ENSSCAG00000011178) NCSTN (ENSSCAG00000011736) VANGL2 (ENSSCAG00000011752) ENSSCAG00000011758 #32 SNX27 (ENSSCAG00000011769) #33 TXNIP (ENSSCAG00000011781) HJV (ENSSCAG00000011784) ENSSCAG00000011787 SF3B4 (ENSSCAG00000011792) ENSSCAG00000011796 OTUD7B (ENSSCAG00000011804) VPS45 (ENSSCAG00000011835) PLEKHO1 (ENSSCAG00000011918) ANP32E (ENSSCAG00000011934) Medium ground finch MODERN SPECIES 396 ENSGFOG00000014024 ENSGFOG00000014022 ENSGFOG00000014020 ENSGFOG00000014018 ENSGFOG00000014017 ENSGFOG00000014016 #22 COPA (ENSGFOG00000013980) Neognathae_c ANCESTRAL SPECIES 33 ENSGT01040000240895 ENSGT01070000254008 ENSGT01030000234999.e ENSGT00960000189316 ENSGT01030000235572 ENSGT01030000234722.b.a.a.b ENSGT00960000189342 ENSGT00960000189349 ENSGT01030000235366 ENSGT01030000234776.C.a.a.b ENSGT00960000189335 ENSGT00730000114393 ENSGT01090000260232 ENSGT00940000172672 ENSGT01060000249291 ENSGT00940000154172 #22 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00390000012496.b ENSGT01030000234540.B.a.a ENSGT01030000234540.D ENSGT01030000234540.C ENSGT00940000174123 ENSGT00940000155795 ENSGT01030000234540.B.b.e.a ENSGT01030000234540.B.b.e.b ENSGT00940000160963 ENSGT00940000162271 ENSGT00940000158350 ENSGT00440000034367 Golden eagle MODERN SPECIES 25 ENSACCG00020000764 ENSACCG00020000786 ENSACCG00020000796 ENSACCG00020000816 ENSACCG00020000828 ENSACCG00020000845 ENSACCG00020000860 ENSACCG00020000877 ENSACCG00020000897 ENSACCG00020000911 ENSACCG00020000922 ENSACCG00020000938 ENSACCG00020000947 ENSACCG00020000957 ENSACCG00020000971 S100A11 (ENSACCG00020000990) #22 COPA (ENSACCG00020001022) NCSTN (ENSACCG00020001062) NHLH1 (ENSACCG00020001094) VANGL2 (ENSACCG00020001106) ENSACCG00020001131 ENSACCG00020001149 ENSACCG00020001164 ENSACCG00020001182 ENSACCG00020001199 KIRREL1 (ENSACCG00020001212) ENSACCG00020001228 ENSACCG00020001246 ENSACCG00020001267 ETV3 (ENSACCG00020001283) ETV3L (ENSACCG00020001315) Kakapo MODERN SPECIES 60 ENSSHBG00005000801 ENSSHBG00005000802 ENSSHBG00005000803 ENSSHBG00005000804 ENSSHBG00005000805 ENSSHBG00005000806 ENSSHBG00005000808 ENSSHBG00005000812 ENSSHBG00005000813 ENSSHBG00005000816 ENSSHBG00005000818 ENSSHBG00005000819 ENSSHBG00005000820 ENSSHBG00005000821 ENSSHBG00005000823 S100A11 (ENSSHBG00005000824) #22 COPA (ENSSHBG00005000825) NCSTN (ENSSHBG00005000828) NHLH1 (ENSSHBG00005000829) VANGL2 (ENSSHBG00005000830) ENSSHBG00005012980 ENSSHBG00005013204 ENSSHBG00005013215 ENSSHBG00005013256 MLLT11 (ENSSHBG00005013281) GABPB2 (ENSSHBG00005013288) SEMA6C (ENSSHBG00005013316) LYSMD1 (ENSSHBG00005013585) SCNM1 (ENSSHBG00005013593) TMOD4 (ENSSHBG00005013606) VPS72 (ENSSHBG00005013623) Lepidosauria ANCESTRAL SPECIES 36 ENSGT00940000162189 ENSGT00940000161006.k ENSGT01030000235377 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000154197 #23 ENSGT00940000160047 #24 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000154996.a.a ENSGT00940000165314 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00390000000698 tuatara MODERN SPECIES 157 S100A11 (ENSSPUG00000002323) #22 S100A10 (ENSSPUG00000002332) #23 THEM4 (ENSSPUG00000002336) #24 C2CD4D (ENSSPUG00000002349) RORC (ENSSPUG00000002357) #26 TDRKH (ENSSPUG00000002369) #28 ENSSPUG00000002417 OAZ3 (ENSSPUG00000002425) #29 MRPL9 (ENSSPUG00000002439) #30 CELF3 (ENSSPUG00000002462) #32 SNX27 (ENSSPUG00000002477) #33 TUFT1 (ENSSPUG00000002499) #34 ENSSPUG00000002546 #35 PSMB4 (ENSSPUG00000002593) POGZ (ENSSPUG00000002680) #36 ENSSPUG00000002696 Episquamata ANCESTRAL SPECIES 17 ENSGT00940000160475 ENSGT00390000002869 ENSGT00940000164585.d ENSGT00390000008274 ENSGT00940000154879 ENSGT00940000156223 ENSGT00390000014184 ENSGT00940000161073 ENSGT00390000004097.b ENSGT00940000160472 ENSGT00940000162189 ENSGT00940000161006.k ENSGT01030000235377 ENSGT00960000189968 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000154197 #23 ENSGT00940000160047.i #24 ENSGT00940000160047.j #24 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000154996.a.a ENSGT00940000165314 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00940000154617.B.u ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 Laterata ANCESTRAL SPECIES 35 ENSGT00960000192881 ENSGT00960000189968 ENSGT00940000154467 #19 ENSGT01040000242094 ENSGT00940000154172 #22 ENSGT00940000154197 #23 ENSGT00940000160047.i #24 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000154996.a.a ENSGT00940000165314 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00940000154617.B.u ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 7 ENSPMRG00000020516 ENSPMRG00000020517 ENSPMRG00000020526 ENSPMRG00000020534 ENSPMRG00000020544 ENSPMRG00000020562 ENSPMRG00000020588 ENSPMRG00000020594 ENSPMRG00000020607 ENSPMRG00000020613 ENSPMRG00000020616 ENSPMRG00000020621 ENSPMRG00000020628 ENSPMRG00000020633 ENSPMRG00000020638 #22 ENSPMRG00000020646 #22 ENSPMRG00000020653 #23 ENSPMRG00000020661 THEM4 (ENSPMRG00000020666) #24 C2CD4D (ENSPMRG00000020673) RORC (ENSPMRG00000020678) #26 ENSPMRG00000020687 ENSPMRG00000020691 TDRKH (ENSPMRG00000020701) #28 OAZ3 (ENSPMRG00000020704) #29 MRPL9 (ENSPMRG00000020716) #30 ENSPMRG00000020722 #32 SNX27 (ENSPMRG00000020729) #33 ENSPMRG00000020739 TUFT1 (ENSPMRG00000020754) #34 ENSPMRG00000020794 #35 Common wall lizard MODERN SPECIES 7 ENSPMRG00000020511 ENSPMRG00000020516 ENSPMRG00000020517 ENSPMRG00000020526 ENSPMRG00000020534 ENSPMRG00000020544 ENSPMRG00000020562 ENSPMRG00000020588 ENSPMRG00000020594 ENSPMRG00000020607 ENSPMRG00000020613 ENSPMRG00000020616 ENSPMRG00000020621 ENSPMRG00000020628 ENSPMRG00000020633 ENSPMRG00000020638 #22 ENSPMRG00000020646 #22 ENSPMRG00000020653 #23 ENSPMRG00000020661 THEM4 (ENSPMRG00000020666) #24 C2CD4D (ENSPMRG00000020673) RORC (ENSPMRG00000020678) #26 ENSPMRG00000020687 ENSPMRG00000020691 TDRKH (ENSPMRG00000020701) #28 OAZ3 (ENSPMRG00000020704) #29 MRPL9 (ENSPMRG00000020716) #30 ENSPMRG00000020722 #32 SNX27 (ENSPMRG00000020729) #33 ENSPMRG00000020739 TUFT1 (ENSPMRG00000020754) #34 Argentine black and white tegu MODERN SPECIES 80 DENND4B (ENSSMRG00000000285) ENSSMRG00000000275 S100A12 (ENSSMRG00000000235) ENSSMRG00000000223 PGLYRP3 (ENSSMRG00000000188) ENSSMRG00000000144 ENSSMRG00000000136 ENSSMRG00000000129 ENSSMRG00000000125 ENSSMRG00000000087 ENSSMRG00000000067 ENSSMRG00000000053 ENSSMRG00000000042 ENSSMRG00000021443 #19 ENSSMRG00000021442 S100A11 (ENSSMRG00000021441) #22 S100A10 (ENSSMRG00000021440) #23 ENSSMRG00000021439 #24 ENSSMRG00000021438 #24 ENSSMRG00000021437 C2CD4D (ENSSMRG00000021436) RORC (ENSSMRG00000021277) #26 ENSSMRG00000021276 ENSSMRG00000021275 #28 MRPL9 (ENSSMRG00000021274) #30 RIIAD1 (ENSSMRG00000021273) #31 CELF3 (ENSSMRG00000021272) #32 ENSSMRG00000021271 SNX27 (ENSSMRG00000021270) #33 ENSSMRG00000021269 ENSSMRG00000021268 Toxicofera ANCESTRAL SPECIES 27 ENSGT00940000161706 ENSGT00940000161854 ENSGT00940000160475 ENSGT00390000002869 ENSGT00390000008274 ENSGT00940000154879 ENSGT00940000156223 ENSGT00390000014184 ENSGT00390000004097.b ENSGT00940000160472 ENSGT00940000162189 ENSGT00940000161006.k ENSGT01030000235377 ENSGT00960000189968 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000154197 #23 ENSGT00940000160047.i #24 ENSGT00940000160047.j #24 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000154996.a.a ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00940000154617.B.u ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B Lizard MODERN SPECIES 1623 S100A11 (ENSACAG00000000617) #22 S100A10 (ENSACAG00000000615) #23 C2CD4D (ENSACAG00000000587) Elapidae ANCESTRAL SPECIES 25 ENSGT01020000233573 ENSGT00940000161706 ENSGT00940000161854 ENSGT00940000160475 ENSGT00390000002869 ENSGT00390000008274 ENSGT00940000154879 ENSGT00940000156223 ENSGT00390000014184 ENSGT00390000004097.b ENSGT00940000160472 ENSGT00940000162189 ENSGT00940000161006.k ENSGT00960000189968 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000154197 #23 ENSGT00940000160047.i #24 ENSGT00940000160047.j #24 ENSGT00940000163537 ENSGT00940000161521 #26 ENSGT00940000154996.a.a ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00940000154617.B.u ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B Indian cobra MODERN SPECIES 17 ENSNNAG00000012103 ENSNNAG00000012135 ENSNNAG00000012168 ENSNNAG00000012359 ENSNNAG00000012377 ENSNNAG00000012395 ENSNNAG00000012401 ENSNNAG00000012422 ENSNNAG00000012447 ENSNNAG00000012460 ENSNNAG00000012470 ENSNNAG00000012491 ENSNNAG00000012524 ENSNNAG00000003850 ENSNNAG00000003859 #19 S100A11 (ENSNNAG00000003879) #22 ENSNNAG00000003893 #23 ENSNNAG00000003911 #24 ENSNNAG00000003946 #24 C2CD4D (ENSNNAG00000004058) RORC (ENSNNAG00000004096) #26 ENSNNAG00000004197 TDRKH (ENSNNAG00000004216) #28 OAZ3 (ENSNNAG00000004267) #29 MRPL9 (ENSNNAG00000004325) #30 RIIAD1 (ENSNNAG00000004416) #31 CELF3 (ENSNNAG00000004439) #32 ENSNNAG00000004501 SNX27 (ENSNNAG00000004563) #33 TUFT1 (ENSNNAG00000004687) #34 ENSNNAG00000004711 #35 Elapidae_a ANCESTRAL SPECIES 198 ENSGT01040000242094.b ENSGT00940000154172 #22 ENSGT00940000154197 #23 ENSGT00940000160047.i #24 ENSGT00940000160047.j #24 Acanthophiinae ANCESTRAL SPECIES 51 ENSGT00940000161073 ENSGT00390000004097.b ENSGT00940000160472 ENSGT00940000162189 ENSGT00940000161006.k ENSGT01000000219047 ENSGT01090000260370 ENSGT01000000220469 ENSGT00960000186896.a.b.a ENSGT00960000189968 ENSGT00940000154467 #19 ENSGT00940000154172 #22 ENSGT00940000161521 #26 ENSGT00940000154996.a.a ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00940000154716 #32 ENSGT00940000154617.B.u ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000162698 #35 ENSGT00390000000698 ENSGT00940000160649 #36 ENSGT00390000014244.jb.b ENSGT00390000014244.jb.a.e.a Eastern brown snake DUPLICATION Eastern brown snake DUPLICATION Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 919 ENSPTXG00000015602 #22 Eastern brown snake MODERN SPECIES 923 ENSPTXG00000015612 #22 Eastern brown snake MODERN SPECIES 924 ENSPTXG00000015613 #22 Eastern brown snake MODERN SPECIES 920 ENSPTXG00000015606 #22 Mainland tiger snake MODERN SPECIES 600 ENSNSUG00000002537 ENSNSUG00000002536 ENSNSUG00000002535 ENSNSUG00000002534 #19 S100A11 (ENSNSUG00000002533) #22 Blue-lipped sea krait MODERN SPECIES 2512 ENSLLTG00000017812 ENSLLTG00000017814 #19 ENSLLTG00000017816 ENSLLTG00000017817 S100A11 (ENSLLTG00000017820) #22 S100A10 (ENSLLTG00000017822) #23 ENSLLTG00000017824 #24 ENSLLTG00000017826 #24 Actinopterygii ANCESTRAL SPECIES 130 ENSGT00900000141074 ENSGT00940000154743.A.b ENSGT00390000008859.b.c ENSGT00940000161506 ENSGT01060000248708 ENSGT00940000157619 ENSGT00940000160917 ENSGT00530000063335.B.a.a ENSGT00390000009464 ENSGT00390000002996 ENSGT00950000182870.a.a.b ENSGT00950000182971.B.b ENSGT00390000007266 ENSGT00530000063948.a ENSGT00730000111747 ENSGT00940000154172 #22 ENSGT00940000171931 ENSGT00940000162071 ENSGT00940000161355 ENSGT00940000159919 ENSGT00390000007801 ENSGT00390000008892 ENSGT00390000003552 ENSGT00940000158021 Neopterygii ANCESTRAL SPECIES 45 ENSGT00390000002996 ENSGT00950000182870.a.a.b ENSGT00390000007266 ENSGT00530000063948.a ENSGT00730000111747 ENSGT00940000154172 #22 ENSGT00940000171931 ENSGT00940000165956 ENSGT00940000162071 ENSGT00940000161355 ENSGT00940000159919 ENSGT00390000007801 ENSGT00900000141074 ENSGT00900000141033.b.b ENSGT00940000156698 ENSGT00390000015248 ENSGT00390000009464 ENSGT00940000157203 ENSGT00390000002799 ENSGT00940000158423 ENSGT00940000157585 Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 872 ENSGT00730000111747.b ENSGT00940000154172.a #22 Clupeocephala ANCESTRAL SPECIES ENSGT00940000154172.a #22 Euteleosteomorpha ANCESTRAL SPECIES 40 ENSGT00440000034367 ENSGT00950000182891.b.b.b.a ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00960000187253 ENSGT00940000165795 ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000177151 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00940000154743.A.a.b Acanthomorphata ANCESTRAL SPECIES 22 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b ENSGT00940000154743.A.a.b Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00940000154743.A.a.b ENSGT00390000010641.i.b Pinecone sodierfish MODERN SPECIES 2 ENSMMDG00005019068 ash1l (ENSMMDG00005019071) lrrc71 (ENSMMDG00005019074) ENSMMDG00005019077 ENSMMDG00005019098 chrna11 (ENSMMDG00005019119) snx27a (ENSMMDG00005019134) #33 ENSMMDG00005019208 s100a10a (ENSMMDG00005019210) trim46b (ENSMMDG00005019227) dpm3 (ENSMMDG00005019358) efna1a (ENSMMDG00005019360) ENSMMDG00005019363 cks1b (ENSMMDG00005019366) ENSMMDG00005019369 ENSMMDG00005019374 #22 ENSMMDG00005019376 s100s (ENSMMDG00005019390) SHE (ENSMMDG00005019400) pygo2 (ENSMMDG00005019404) cgnb (ENSMMDG00005019414) ENSMMDG00005019428 #34 C1orf43 (ENSMMDG00005019435) ubap2l (ENSMMDG00005019451) hax1 (ENSMMDG00005019515) aqp10b (ENSMMDG00005019521) znf687b (ENSMMDG00005019523) psmd4a (ENSMMDG00005019535) PIP5K1A (ENSMMDG00005019571) ENSMMDG00005001179 ENSMMDG00005001193 Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b ENSGT00940000154743.A.a.b Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b Ovalentaria ANCESTRAL SPECIES 12 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00940000171101 Oryzias ANCESTRAL SPECIES 24 ENSGT00940000160917 ENSGT00940000156698.c ENSGT00940000155363.w ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00940000171101 ENSGT00390000006215.b Oryzias_a ANCESTRAL SPECIES 64 ENSGT00940000160917 ENSGT00940000156698.c ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000171101 ENSGT00390000006215.b ENSGT00940000154743.A.a.b Japanese Medaka HdrR MODERN SPECIES 2 scamp3 (ENSORLG00000000625) ash1l (ENSORLG00000000611) ENSORLG00000000594 ENSORLG00000000590 chrna11 (ENSORLG00000024582) ENSORLG00000000568 #33 icn (ENSORLG00000026521) s100a10b (ENSORLG00000000531) trim46b (ENSORLG00000000520) dpm3 (ENSORLG00000000494) efna1a (ENSORLG00000029418) ENSORLG00000023971 ENSORLG00000027127 cks1b (ENSORLG00000026617) ENSORLG00000000477 ENSORLG00000025134 #22 s100u (ENSORLG00000025692) s100s (ENSORLG00000022495) ENSORLG00000029460 pygo2 (ENSORLG00000023708) cgnb (ENSORLG00000000455) ENSORLG00000000444 #34 C1orf43 (ENSORLG00000000442) ubap2l (ENSORLG00000000418) hax1 (ENSORLG00000028501) aqp10b (ENSORLG00000000339) znf687b (ENSORLG00000025604) psmd4a (ENSORLG00000000320) ENSORLG00000030270 ENSORLG00000000301 ENSORLG00000026548 Chinese medaka MODERN SPECIES 944 trim46b (ENSOSIG00000000878) dpm3 (ENSOSIG00000000890) efna1a (ENSOSIG00000000895) cks1b (ENSOSIG00000000901) ENSOSIG00000000902 ENSOSIG00000000904 #22 ENSOSIG00000000907 pygo2 (ENSOSIG00000000921) ENSOSIG00000000926 #34 C1orf43 (ENSOSIG00000000936) ubap2l (ENSOSIG00000000957) psmd4a (ENSOSIG00000001050) hax1 (ENSOSIG00000001975) aqp10b (ENSOSIG00000002062) znf687b (ENSOSIG00000002084) pip5k1aa (ENSOSIG00000002118) ENSOSIG00000002192 ndufv1 (ENSOSIG00000002271) ENSOSIG00000005073 ENSOSIG00000005076 Oryzias_b ANCESTRAL SPECIES 31 ENSGT00940000166610 ENSGT00940000157619.a.b ENSGT00940000160917 ENSGT00940000156698.c ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000168838 ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324.c ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00940000171101 ENSGT00390000006215.b Indian medaka MODERN SPECIES 29 crabp2b (ENSOMEG00000006936) scamp3 (ENSOMEG00000006917) ash1l (ENSOMEG00000006866) ENSOMEG00000006790 ENSOMEG00000006680 chrna11 (ENSOMEG00000006641) SNX27 (ENSOMEG00000000967) #33 ENSOMEG00000006523 s100a10a (ENSOMEG00000006493) trim46b (ENSOMEG00000006470) dpm3 (ENSOMEG00000006423) efna1a (ENSOMEG00000006394) ENSOMEG00000006357 cks1b (ENSOMEG00000006346) ENSOMEG00000006328 ENSOMEG00000006318 #22 s100u (ENSOMEG00000006309) s100s (ENSOMEG00000006300) pygo2 (ENSOMEG00000006276) cgnb (ENSOMEG00000006237) ENSOMEG00000006189 #34 C1orf43 (ENSOMEG00000006115) ubap2l (ENSOMEG00000006074) hax1 (ENSOMEG00000005917) aqp10b (ENSOMEG00000005898) znf687b (ENSOMEG00000005886) PSMD4 (ENSOMEG00000005853) ENSOMEG00000005827 ENSOMEG00000005784 ENSOMEG00000005775 ENSOMEG00000005770 Javanese ricefish MODERN SPECIES 2 mrps21 (ENSOJAG00000005561) crabp2b (ENSOJAG00000005576) scamp3 (ENSOJAG00000005589) ENSOJAG00000005712 ENSOJAG00000005839 chrna11 (ENSOJAG00000005893) snx27a (ENSOJAG00000006063) #33 ENSOJAG00000006150 s100a10a (ENSOJAG00000006161) trim46b (ENSOJAG00000006183) dpm3 (ENSOJAG00000006206) efna1a (ENSOJAG00000006214) ENSOJAG00000006227 cks1b (ENSOJAG00000006237) ENSOJAG00000006257 ENSOJAG00000006340 #22 s100u (ENSOJAG00000006347) s100s (ENSOJAG00000006354) ENSOJAG00000006375 C1orf43 (ENSOJAG00000006537) ubap2l (ENSOJAG00000006692) hax1 (ENSOJAG00000007932) aqp10b (ENSOJAG00000007966) ENSOJAG00000001647 ndufv1 (ENSOJAG00000001689) ENSOJAG00000001838 ENSOJAG00000001849 psmd4a (ENSOJAG00000001863) znf687b (ENSOJAG00000001900) ENSOJAG00000001917 tmem79a (ENSOJAG00000001928) Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b Cyprinodontoidei ANCESTRAL SPECIES 11 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b Poeciliinae ANCESTRAL SPECIES 18 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00940000154743.A.a.b Poecilia ANCESTRAL SPECIES 55 ENSGT00940000156698.c ENSGT00440000034367 ENSGT00940000155363.w ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00940000154743.A.a.b NAME_6 ANCESTRAL SPECIES 128 ENSGT00940000156698.c ENSGT00940000173967 ENSGT00940000155363.w ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00940000168838 Amazon molly MODERN SPECIES 377 ash1l (ENSPFOG00000008852) ENSPFOG00000023082 ENSPFOG00000009008 ENSPFOG00000009016 chrna11 (ENSPFOG00000009080) SNX27 (ENSPFOG00000009276) #33 icn2 (ENSPFOG00000009398) ENSPFOG00000009404 trim46b (ENSPFOG00000009422) dpm3 (ENSPFOG00000009593) efna1a (ENSPFOG00000009606) ENSPFOG00000009661 ENSPFOG00000009675 cks1b (ENSPFOG00000009707) ENSPFOG00000009734 ENSPFOG00000009763 #22 s100u (ENSPFOG00000009776) s100s (ENSPFOG00000009789) SHE (ENSPFOG00000009793) ENSPFOG00000009844 Sailfin molly MODERN SPECIES 841 ENSPLAG00000015663 cks1b (ENSPLAG00000015658) ENSPLAG00000015646 ENSPLAG00000015644 #22 s100u (ENSPLAG00000015590) s100s (ENSPLAG00000015581) SHE (ENSPLAG00000015555) ENSPLAG00000015547 Guppy MODERN SPECIES 441 ENSPREG00000019064 ash1l (ENSPREG00000019101) lrrc71 (ENSPREG00000019135) ENSPREG00000019180 ENSPREG00000019339 chrna11 (ENSPREG00000019402) SNX27 (ENSPREG00000019441) #33 icn2 (ENSPREG00000019482) s100a10b (ENSPREG00000019496) trim46b (ENSPREG00000019553) dpm3 (ENSPREG00000019597) efna1a (ENSPREG00000019616) ENSPREG00000019632 cks1b (ENSPREG00000019645) ENSPREG00000019653 ENSPREG00000019668 #22 ENSPREG00000019692 s100s (ENSPREG00000019702) SHE (ENSPREG00000019724) pygo2 (ENSPREG00000019764) cgnb (ENSPREG00000019777) ENSPREG00000019804 #34 C1orf43 (ENSPREG00000019815) ubap2l (ENSPREG00000019846) ENSPREG00000019910 hax1 (ENSPREG00000019934) aqp10b (ENSPREG00000019991) znf687b (ENSPREG00000020006) ENSPREG00000020031 psmd4a (ENSPREG00000020043) PIP5K1A (ENSPREG00000020072) Platyfish MODERN SPECIES 4 ENSXMAG00000014665 ash1l (ENSXMAG00000014673) lrrc71 (ENSXMAG00000014679) ENSXMAG00000014681 ENSXMAG00000014698 chrna11 (ENSXMAG00000014725) snx27a (ENSXMAG00000014739) #33 icn2 (ENSXMAG00000028927) s100a10a (ENSXMAG00000014763) trim46b (ENSXMAG00000027467) dpm3 (ENSXMAG00000020287) efna1a (ENSXMAG00000014802) ENSXMAG00000029329 ENSXMAG00000025812 cks1b (ENSXMAG00000023898) ENSXMAG00000014816 #22 ENSXMAG00000014814 s100u (ENSXMAG00000014820) s100s (ENSXMAG00000014824) SHE (ENSXMAG00000014826) pygo2 (ENSXMAG00000024650) cgnb (ENSXMAG00000014842) ENSXMAG00000027024 #34 C1orf43 (ENSXMAG00000024844) ubap2l (ENSXMAG00000014867) hax1 (ENSXMAG00000014945) aqp10b (ENSXMAG00000023474) znf687b (ENSXMAG00000015254) psmd4a (ENSXMAG00000015234) PIP5K1A (ENSXMAG00000015212) ENSXMAG00000014968 NAME_4 ANCESTRAL SPECIES 10 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000177151 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b Sheepshead minnow MODERN SPECIES 203 ENSCVAG00000017930 ash1l (ENSCVAG00000017872) lrrc71 (ENSCVAG00000017850) ENSCVAG00000017817 ENSCVAG00000017788 chrna11 (ENSCVAG00000017748) snx27a (ENSCVAG00000017700) #33 icn (ENSCVAG00000017622) s100a10a (ENSCVAG00000017616) trim46b (ENSCVAG00000017607) dpm3 (ENSCVAG00000017572) efna1a (ENSCVAG00000017560) ENSCVAG00000017556 cks1b (ENSCVAG00000017551) ENSCVAG00000000772 ENSCVAG00000017519 #22 s100u (ENSCVAG00000017508) s100s (ENSCVAG00000017499) ENSCVAG00000017483 pygo2 (ENSCVAG00000017449) ENSCVAG00000017423 #35 ENSCVAG00000017378 #34 C1orf43 (ENSCVAG00000017363) ubap2l (ENSCVAG00000000444) CDKN2C (ENSCVAG00000017273) Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00940000160917 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b Turquoise killifish MODERN SPECIES 1628 rpl30 (ENSNFUG00015012732) ENSNFUG00015012721 ENSNFUG00015012718 ENSNFUG00015012714 ENSNFUG00015012698 ENSNFUG00015012688 ENSNFUG00015012684 TRPS1 (ENSNFUG00015012675) ENSNFUG00015012670 ENSNFUG00015012666 ENSNFUG00015012665 ENSNFUG00015012663 ENSNFUG00015012662 clptm1l (ENSNFUG00015011453) RPLP1 (ENSNFUG00015011322) S100A11 (ENSNFUG00015011315) #22 PBXIP1A (ENSNFUG00015011302) s100s (ENSNFUG00015011287) SHE (ENSNFUG00015011276) PYGO2 (ENSNFUG00015011267) cgnb (ENSNFUG00015011242) ENSNFUG00015011229 #34 C1ORF43 (ENSNFUG00015011204) ENSNFUG00015011197 UBAP2L (ENSNFUG00015011109) HAX1 (ENSNFUG00015011057) aqp10b (ENSNFUG00015010295) znf687b (ENSNFUG00015010236) psmd4a (ENSNFUG00015010186) PIP5K1A (ENSNFUG00015010120) ENSNFUG00015010078 Mangrove rivulus MODERN SPECIES 2 ENSKMAG00000011862 ash1l (ENSKMAG00000011776) lrrc71 (ENSKMAG00000011716) ENSKMAG00000011647 ENSKMAG00000011606 chrna11 (ENSKMAG00000011541) snx27a (ENSKMAG00000011486) #33 icn (ENSKMAG00000011467) s100a10a (ENSKMAG00000011450) trim46b (ENSKMAG00000011413) dpm3 (ENSKMAG00000011399) efna1a (ENSKMAG00000011385) ENSKMAG00000011369 cks1b (ENSKMAG00000011353) ENSKMAG00000011336 ENSKMAG00000011320 #22 s100u (ENSKMAG00000011309) s100s (ENSKMAG00000011292) SHE (ENSKMAG00000011270) pygo2 (ENSKMAG00000011253) cgnb (ENSKMAG00000011220) C1orf43 (ENSKMAG00000011191) ENSKMAG00000011172 #34 ubap2l (ENSKMAG00000011082) hax1 (ENSKMAG00000011038) aqp10b (ENSKMAG00000011004) znf687b (ENSKMAG00000010973) ENSKMAG00000010953 psmd4a (ENSKMAG00000010902) PIP5K1A (ENSKMAG00000010870) ENSKMAG00000010861 Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b Pomacentridae ANCESTRAL SPECIES 7 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691.h ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b ENSGT00950000183155.a.b.a.a.b.c.a Pomacentridae_A ANCESTRAL SPECIES 37 ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT01100000264401 ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691.h ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000171101 ENSGT00390000006215.b ENSGT00950000183155.a.b.a.a.b.c.a Amphiprion ANCESTRAL SPECIES 91 ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00940000162871.i ENSGT00940000165795.d ENSGT01100000264401 ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691.h ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000171101 ENSGT00730000110871.a.a.a.a ENSGT00930000151026 Orange clownfish MODERN SPECIES 8 celf3a (ENSAPEG00000008728) #32 cers2a (ENSAPEG00000008672) clk2a (ENSAPEG00000008626) ENSAPEG00000008592 chrna11 (ENSAPEG00000008561) snx27a (ENSAPEG00000008493) #33 ENSAPEG00000008482 s100a10a (ENSAPEG00000008476) ENSAPEG00000008465 trim46b (ENSAPEG00000008418) dpm3 (ENSAPEG00000008384) efna1a (ENSAPEG00000008353) ENSAPEG00000008329 cks1b (ENSAPEG00000008300) ENSAPEG00000008283 ENSAPEG00000008275 #22 s100u (ENSAPEG00000008267) s100s (ENSAPEG00000008197) SHE (ENSAPEG00000008188) pygo2 (ENSAPEG00000008185) cgnb (ENSAPEG00000008164) ENSAPEG00000008142 #34 C1orf43 (ENSAPEG00000008101) ubap2l (ENSAPEG00000008041) hax1 (ENSAPEG00000008010) aqp10b (ENSAPEG00000008000) znf687b (ENSAPEG00000007954) psmd4a (ENSAPEG00000007908) pip5k1aa (ENSAPEG00000007852) ENSAPEG00000007778 cyp51 (ENSAPEG00000007764) Clown anemonefish MODERN SPECIES 3447 ENSAOCG00000009314 cks1b (ENSAOCG00000009307) ENSAOCG00000009285 ENSAOCG00000009269 #22 s100u (ENSAOCG00000009255) s100s (ENSAOCG00000009236) SHE (ENSAOCG00000009191) pygo2 (ENSAOCG00000009175) cgnb (ENSAOCG00000009152) ENSAOCG00000009100 #34 C1orf43 (ENSAOCG00000009069) ubap2l (ENSAOCG00000000535) hax1 (ENSAOCG00000008886) aqp10b (ENSAOCG00000008833) Bicolor damselfish MODERN SPECIES 565 dpm3 (ENSSPAG00000000037) efna1a (ENSSPAG00000000030) ENSSPAG00000022136 cks1b (ENSSPAG00000022127) ENSSPAG00000022113 ENSSPAG00000022089 #22 s100u (ENSSPAG00000022082) s100s (ENSSPAG00000022079) SHE (ENSSPAG00000022073) pygo2 (ENSSPAG00000022069) cgnb (ENSSPAG00000022053) ENSSPAG00000022020 #34 C1orf43 (ENSSPAG00000022033) ubap2l (ENSSPAG00000021901) hax1 (ENSSPAG00000021865) aqp10b (ENSSPAG00000021767) znf687b (ENSSPAG00000021707) psmd4a (ENSSPAG00000021684) PIP5K1A (ENSSPAG00000021643) ENSSPAG00000021632 ENSSPAG00000021609 Cichlidae ANCESTRAL SPECIES 7 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b Midas cichlid MODERN SPECIES 329 trim46b (ENSACIG00000004170) dpm3 (ENSACIG00000004146) efna1a (ENSACIG00000004128) ENSACIG00000004110 cks1b (ENSACIG00000004101) ENSACIG00000004067 ENSACIG00000004006 #22 ENSACIG00000003994 s100s (ENSACIG00000003938) SHE (ENSACIG00000003908) cgnb (ENSACIG00000003819) ENSACIG00000003760 #34 C1orf43 (ENSACIG00000003732) ubap2l (ENSACIG00000003560) hax1 (ENSACIG00000003544) aqp10b (ENSACIG00000003498) znf687b (ENSACIG00000003449) ENSACIG00000003431 psmd4a (ENSACIG00000003403) pip5k1aa (ENSACIG00000003302) ENSACIG00000003294 ENSACIG00000003224 Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b Haplochromini ANCESTRAL SPECIES 5 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b Burton s mouthbrooder MODERN SPECIES 357 ash1l (ENSHBUG00000020326) lrrc71 (ENSHBUG00000020371) ENSHBUG00000020403 ENSHBUG00000020523 chrna11 (ENSHBUG00000020580) snx27a (ENSHBUG00000000631) #33 ENSHBUG00000020641 ENSHBUG00000020643 s100a10a (ENSHBUG00000020650) trim46b (ENSHBUG00000020692) dpm3 (ENSHBUG00000020711) efna1a (ENSHBUG00000020735) ENSHBUG00000020740 cks1b (ENSHBUG00000020757) ENSHBUG00000020772 ENSHBUG00000020785 #22 s100u (ENSHBUG00000020788) s100s (ENSHBUG00000020793) SHE (ENSHBUG00000020801) pygo2 (ENSHBUG00000020816) cgnb (ENSHBUG00000020841) ENSHBUG00000020859 #34 C1orf43 (ENSHBUG00000001034) ubap2l (ENSHBUG00000021037) hax1 (ENSHBUG00000021052) aqp10b (ENSHBUG00000021063) znf687b (ENSHBUG00000021078) ENSHBUG00000021090 psmd4a (ENSHBUG00000021151) PIP5K1A (ENSHBUG00000021166) ENSHBUG00000021174 Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00940000160917 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b ENSGT00940000154743.A.a.b Eastern happy MODERN SPECIES 13 aqp10b (ENSACLG00000010213) znf687b (ENSACLG00000010230) psmd4a (ENSACLG00000010267) PIP5K1A (ENSACLG00000010283) ENSACLG00000010314 ENSACLG00000010317 ndufv1 (ENSACLG00000010319) ENSACLG00000010328 ENSACLG00000010332 RPS19 (ENSACLG00000010375) ENSACLG00000010399 ENSACLG00000010415 mef2d (ENSACLG00000010423) cks1b (ENSACLG00000010526) ENSACLG00000010538 ENSACLG00000010564 #22 s100u (ENSACLG00000010572) s100s (ENSACLG00000010756) ENSACLG00000010771 mrpl24 (ENSACLG00000010827) HDGF (ENSACLG00000010863) prcc (ENSACLG00000010880) mrpl9 (ENSACLG00000010920) #30 ENSACLG00000010934 si:dkey-266f7.9 (ENSACLG00000010962) rpz2 (ENSACLG00000010988) krit1 (ENSACLG00000010998) cyp51 (ENSACLG00000011052) ENSACLG00000011385 MTERF1 (ENSACLG00000011571) dus3l (ENSACLG00000011576) Zebra mbuna MODERN SPECIES 1104 ENSMZEG00005026514 ash1l (ENSMZEG00005026516) ENSMZEG00005026520 ENSMZEG00005026524 chrna11 (ENSMZEG00005026530) snx27a (ENSMZEG00005026536) #33 ENSMZEG00005026538 ENSMZEG00005026540 s100a10a (ENSMZEG00005026541) trim46b (ENSMZEG00005026543) dpm3 (ENSMZEG00005026545) efna1a (ENSMZEG00005026547) ENSMZEG00005026548 cks1b (ENSMZEG00005026550) ENSMZEG00005026551 ENSMZEG00005026555 #22 s100u (ENSMZEG00005026557) s100s (ENSMZEG00005026559) ENSMZEG00005026561 SHE (ENSMZEG00005026562) pygo2 (ENSMZEG00005026564) cgnb (ENSMZEG00005026565) ENSMZEG00005026566 #34 C1orf43 (ENSMZEG00005026569) ubap2l (ENSMZEG00005026572) hax1 (ENSMZEG00005026578) aqp10b (ENSMZEG00005026582) znf687b (ENSMZEG00005026588) psmd4a (ENSMZEG00005026591) pip5k1aa (ENSMZEG00005026593) ENSMZEG00005026595 P. nyererei MODERN SPECIES 397 ash1l (ENSPNYG00000011349) lrrc71 (ENSPNYG00000011319) ENSPNYG00000011291 ENSPNYG00000011109 chrna11 (ENSPNYG00000011046) snx27a (ENSPNYG00000011002) #33 ENSPNYG00000010908 ENSPNYG00000010893 s100a10a (ENSPNYG00000010880) trim46b (ENSPNYG00000010844) dpm3 (ENSPNYG00000010826) efna1a (ENSPNYG00000010806) ENSPNYG00000010787 cks1b (ENSPNYG00000010772) ENSPNYG00000010753 ENSPNYG00000010695 #22 s100u (ENSPNYG00000010681) s100s (ENSPNYG00000010649) SHE (ENSPNYG00000010625) pygo2 (ENSPNYG00000010614) cgnb (ENSPNYG00000010580) ENSPNYG00000010562 #34 C1orf43 (ENSPNYG00000010519) ubap2l (ENSPNYG00000010412) hax1 (ENSPNYG00000010366) aqp10b (ENSPNYG00000010082) znf687b (ENSPNYG00000010000) ENSPNYG00000009982 psmd4a (ENSPNYG00000009957) PIP5K1A (ENSPNYG00000009908) ENSPNYG00000009893 Lyretail cichlid MODERN SPECIES 302 ash1l (ENSNBRG00000017174) lrrc71 (ENSNBRG00000017131) ENSNBRG00000017009 ENSNBRG00000016931 chrna11 (ENSNBRG00000016828) snx27a (ENSNBRG00000016773) #33 ENSNBRG00000016749 ENSNBRG00000016739 s100a10a (ENSNBRG00000016655) trim46b (ENSNBRG00000016613) dpm3 (ENSNBRG00000016594) efna1a (ENSNBRG00000016557) ENSNBRG00000016520 cks1b (ENSNBRG00000016502) ENSNBRG00000016435 ENSNBRG00000016388 #22 s100u (ENSNBRG00000016377) s100s (ENSNBRG00000016313) SHE (ENSNBRG00000016283) pygo2 (ENSNBRG00000016278) cgnb (ENSNBRG00000016236) ENSNBRG00000016185 #34 C1orf43 (ENSNBRG00000016149) ubap2l (ENSNBRG00000016054) hax1 (ENSNBRG00000016015) aqp10b (ENSNBRG00000015843) znf687b (ENSNBRG00000015762) ENSNBRG00000015739 psmd4a (ENSNBRG00000015701) PIP5K1A (ENSNBRG00000015643) ENSNBRG00000015628 Nile tilapia MODERN SPECIES 13 ENSONIG00000019713 ash1l (ENSONIG00000019716) lrrc71 (ENSONIG00000028356) ENSONIG00000019717 chrna11 (ENSONIG00000019719) snx27a (ENSONIG00000019721) #33 ENSONIG00000038772 ENSONIG00000028947 s100a10a (ENSONIG00000031982) trim46b (ENSONIG00000019724) dpm3 (ENSONIG00000027309) efna1a (ENSONIG00000038657) ENSONIG00000032139 cks1b (ENSONIG00000027098) ENSONIG00000019730 ENSONIG00000032250 #22 s100u (ENSONIG00000019731) s100s (ENSONIG00000027404) SHE (ENSONIG00000019733) pygo2 (ENSONIG00000033754) cgnb (ENSONIG00000019737) ENSONIG00000019738 #34 C1orf43 (ENSONIG00000019739) ubap2l (ENSONIG00000019743) hax1 (ENSONIG00000019747) aqp10b (ENSONIG00000019750) ENSONIG00000028636 znf687b (ENSONIG00000019751) psmd4a (ENSONIG00000019752) PIP5K1A (ENSONIG00000019753) ENSONIG00000019755 Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000171101 ENSGT00950000183155.a.b.a.a.b.c.a Eupercaria ANCESTRAL SPECIES 11 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000171101 ENSGT00390000006215.b Tetraodontidae ANCESTRAL SPECIES ENSGT00940000154172.a #22 Tetraodon MODERN SPECIES 16 ENSTNIG00000017547 crabp2b (ENSTNIG00000017548) scamp3 (ENSTNIG00000017549) ENSTNIG00000000111 ash1l (ENSTNIG00000017550) ENSTNIG00000017551 ENSTNIG00000017552 chrna11 (ENSTNIG00000017553) snx27a (ENSTNIG00000017554) #33 ENSTNIG00000017555 s100a10a (ENSTNIG00000017556) trim46b (ENSTNIG00000017557) dpm3 (ENSTNIG00000001321) efna1a (ENSTNIG00000017558) ENSTNIG00000017559 ENSTNIG00000017560 #22 s100s (ENSTNIG00000017561) SHE (ENSTNIG00000017562) pygo2 (ENSTNIG00000017563) cgnb (ENSTNIG00000017564) ENSTNIG00000017565 #34 C1orf43 (ENSTNIG00000017566) ubap2l (ENSTNIG00000017567) hax1 (ENSTNIG00000000666) aqp10b (ENSTNIG00000017568) znf687b (ENSTNIG00000017569) psmd4a (ENSTNIG00000017570) pip5k1aa (ENSTNIG00000017571) ENSTNIG00000017572 clk2a (ENSTNIG00000017573) ENSTNIG00000017574 Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000171101 ENSGT00390000006215.b Ballan wrasse MODERN SPECIES 312 ENSLBEG00000026565 cks1b (ENSLBEG00000026546) ENSLBEG00000026517 ENSLBEG00000026460 #22 s100u (ENSLBEG00000026449) s100s (ENSLBEG00000026439) SHE (ENSLBEG00000026417) pygo2 (ENSLBEG00000026408) cgnb (ENSLBEG00000026368) ENSLBEG00000026314 #34 C1orf43 (ENSLBEG00000026343) ubap2l (ENSLBEG00000026186) hax1 (ENSLBEG00000026107) aqp10b (ENSLBEG00000026065) znf687b (ENSLBEG00000026012) psmd4a (ENSLBEG00000025965) pip5k1aa (ENSLBEG00000025921) ENSLBEG00000025904 ENSLBEG00000025889 Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000171101 ENSGT00950000183155.a.b.a.a.b.c.a Perciformes ANCESTRAL SPECIES 11 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000171101 ENSGT00950000183155.a.b.a.a.b.c.a ENSGT00950000183155.a.b.a.a.b.c.b Cottioidei ANCESTRAL SPECIES 16 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000171101 ENSGT00950000183155.a.b.a.a.b.c.a ENSGT00950000183155.a.b.a.a.b.c.b Lumpfish MODERN SPECIES 2 ENSCLMG00005016157 ash1l (ENSCLMG00005016162) lrrc71 (ENSCLMG00005016509) ENSCLMG00005016510 ENSCLMG00005016513 chrna11 (ENSCLMG00005016514) snx27a (ENSCLMG00005016520) #33 icn (ENSCLMG00005016680) ENSCLMG00005016682 trim46b (ENSCLMG00005016689) dpm3 (ENSCLMG00005016864) efna1a (ENSCLMG00005016866) ENSCLMG00005016867 cks1b (ENSCLMG00005016868) ENSCLMG00005016869 ENSCLMG00005016871 #22 s100u (ENSCLMG00005016874) s100s (ENSCLMG00005016875) SHE (ENSCLMG00005016878) pygo2 (ENSCLMG00005016880) cgnb (ENSCLMG00005016890) ENSCLMG00005016910 #34 C1orf43 (ENSCLMG00005016913) ubap2l (ENSCLMG00005016930) hax1 (ENSCLMG00005017010) aqp10b (ENSCLMG00005017011) znf687b (ENSCLMG00005017012) psmd4a (ENSCLMG00005017016) pip5k1aa (ENSCLMG00005017073) ENSCLMG00005017580 ENSCLMG00005017581 Perciformes_a ANCESTRAL SPECIES 14 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000171101 ENSGT00950000183155.a.b.a.a.b.c.b ENSGT00940000154743.A.a.b Pike perch MODERN SPECIES 13 ENSSLUG00000012608 ash1l (ENSSLUG00000012622) lrrc71 (ENSSLUG00000012776) ENSSLUG00000012784 ENSSLUG00000012794 chrna11 (ENSSLUG00000012824) snx27a (ENSSLUG00000012852) #33 icn2 (ENSSLUG00000012896) s100a10a (ENSSLUG00000012898) trim46b (ENSSLUG00000012907) dpm3 (ENSSLUG00000012919) efna1a (ENSSLUG00000012923) ENSSLUG00000012927 cks1b (ENSSLUG00000012930) ENSSLUG00000012935 ENSSLUG00000012942 #22 s100u (ENSSLUG00000012946) s100s (ENSSLUG00000012947) SHE (ENSSLUG00000012951) pygo2 (ENSSLUG00000012956) cgnb (ENSSLUG00000012965) ENSSLUG00000012984 #34 C1orf43 (ENSSLUG00000012987) ubap2l (ENSSLUG00000013008) hax1 (ENSSLUG00000013100) aqp10b (ENSSLUG00000013113) znf687b (ENSSLUG00000013128) psmd4a (ENSSLUG00000013139) pip5k1aa (ENSSLUG00000013153) ENSSLUG00000013187 ndufv1 (ENSSLUG00000013201) Channel bull blenny MODERN SPECIES 2 ash1l (ENSCGOG00000014064) lrrc71 (ENSCGOG00000014125) ENSCGOG00000014127 ENSCGOG00000014140 chrna11 (ENSCGOG00000014164) SNX27 (ENSCGOG00000014175) #33 icn (ENSCGOG00000014241) s100a10a (ENSCGOG00000014244) trim46b (ENSCGOG00000014248) dpm3 (ENSCGOG00000014257) efna1a (ENSCGOG00000014260) ENSCGOG00000014268 ENSCGOG00000014271 cks1b (ENSCGOG00000014272) ENSCGOG00000014295 ENSCGOG00000014297 #22 s100u (ENSCGOG00000014298) s100s (ENSCGOG00000014300) SHE (ENSCGOG00000014301) pygo2 (ENSCGOG00000014302) cgnb (ENSCGOG00000014304) ENSCGOG00000014314 #34 C1orf43 (ENSCGOG00000014316) ubap2l (ENSCGOG00000014495) hax1 (ENSCGOG00000001268) aqp10b (ENSCGOG00000001281) znf687b (ENSCGOG00000001305) psmd4a (ENSCGOG00000001348) pip5k1aa (ENSCGOG00000001552) ENSCGOG00000002046 ENSCGOG00000002049 Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00940000178054 ENSGT00530000064050.a ENSGT00940000171101 ENSGT00950000183155.a.b.b.h Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000171101 ENSGT00940000154743.A.a.b ENSGT00390000010641.i.b Large yellow croaker MODERN SPECIES 484 rnf115b (ENSLCRG00005019098) ash1l (ENSLCRG00005019160) lrrc71 (ENSLCRG00005019971) ENSLCRG00005019987 ENSLCRG00005019996 snx27a (ENSLCRG00005020029) #33 chrna11 (ENSLCRG00005020038) ENSLCRG00005020041 s100a10a (ENSLCRG00005020045) trim46b (ENSLCRG00005020048) dpm3 (ENSLCRG00005020077) efna1a (ENSLCRG00005020081) ENSLCRG00005020085 cks1b (ENSLCRG00005020090) ENSLCRG00005020094 ENSLCRG00005020103 #22 s100u (ENSLCRG00005020105) s100s (ENSLCRG00005020106) SHE (ENSLCRG00005020108) pygo2 (ENSLCRG00005020109) cgnb (ENSLCRG00005020110) ENSLCRG00005020116 #34 C1orf43 (ENSLCRG00005020121) ubap2l (ENSLCRG00005020158) hax1 (ENSLCRG00005020218) aqp10b (ENSLCRG00005020225) znf687b (ENSLCRG00005020231) psmd4a (ENSLCRG00005020248) pip5k1aa (ENSLCRG00005020307) nedd9 (ENSLCRG00005020348) smim13 (ENSLCRG00005020351) Gilthead seabream MODERN SPECIES 17 ENSSAUG00010006374 ash1l (ENSSAUG00010006384) lrrc71 (ENSSAUG00010006921) ENSSAUG00010006924 ENSSAUG00010006932 chrna11 (ENSSAUG00010006950) SNX27 (ENSSAUG00010006968) #33 icn (ENSSAUG00010007211) s100a10a (ENSSAUG00010007214) trim46b (ENSSAUG00010007218) dpm3 (ENSSAUG00010007413) efna1a (ENSSAUG00010007414) ENSSAUG00010007415 ENSSAUG00010007418 cks1b (ENSSAUG00010007420) ENSSAUG00010007421 #22 s100u (ENSSAUG00010007422) s100s (ENSSAUG00010007425) SHE (ENSSAUG00010007427) pygo2 (ENSSAUG00010007428) cgnb (ENSSAUG00010007430) ENSSAUG00010007436 #34 C1orf43 (ENSSAUG00010007442) ubap2l (ENSSAUG00010007498) hax1 (ENSSAUG00010012824) aqp10b (ENSSAUG00010012827) znf687b (ENSSAUG00010012836) psmd4a (ENSSAUG00010012828) ENSSAUG00010012838 pip5k1aa (ENSSAUG00010012843) ENSSAUG00010012856 Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00390000006215.b ENSGT00940000171101 Carangaria ANCESTRAL SPECIES 14 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00940000171101 ENSGT00390000006215.b Carangaria_A ANCESTRAL SPECIES 16 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000171101 ENSGT00390000006215.b ENSGT00950000183155.a.b.a.a.b.d Seriola ANCESTRAL SPECIES 12 ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.b.a ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000171101 ENSGT00390000006215.b ENSGT00950000183155.a.b.a.a.b.c.b Yellowtail amberjack MODERN SPECIES 2834 scamp3 (ENSSLDG00000014024) ENSSLDG00000014064 ash1l (ENSSLDG00000014132) ENSSLDG00000014234 ENSSLDG00000014293 ENSSLDG00000014381 SNX27 (ENSSLDG00000014428) #33 icn (ENSSLDG00000014466) s100a10b (ENSSLDG00000014481) trim46b (ENSSLDG00000014551) dpm3 (ENSSLDG00000014600) efna1a (ENSSLDG00000014614) ENSSLDG00000014634 cks1b (ENSSLDG00000014648) ENSSLDG00000014665 ENSSLDG00000014676 #22 s100u (ENSSLDG00000014685) s100s (ENSSLDG00000014694) SHE (ENSSLDG00000014704) pygo2 (ENSSLDG00000014714) cgnb (ENSSLDG00000014735) ENSSLDG00000014772 #34 C1orf43 (ENSSLDG00000014790) ubap2l (ENSSLDG00000014825) hax1 (ENSSLDG00000014903) aqp10b (ENSSLDG00000014929) znf687b (ENSSLDG00000014947) psmd4a (ENSSLDG00000015045) pip5k1aa (ENSSLDG00000015196) ENSSLDG00000015213 ENSSLDG00000015233 Greater amberjack MODERN SPECIES 48 ENSSDUG00000018582 ash1l (ENSSDUG00000018480) lrrc71 (ENSSDUG00000018445) ENSSDUG00000018423 ENSSDUG00000018270 chrna11 (ENSSDUG00000018229) snx27a (ENSSDUG00000018214) #33 icn (ENSSDUG00000018209) s100a10a (ENSSDUG00000018200) trim46b (ENSSDUG00000018130) dpm3 (ENSSDUG00000018108) efna1a (ENSSDUG00000018101) ENSSDUG00000018087 cks1b (ENSSDUG00000018075) ENSSDUG00000018041 ENSSDUG00000018030 #22 s100u (ENSSDUG00000018011) s100s (ENSSDUG00000017975) SHE (ENSSDUG00000017964) pygo2 (ENSSDUG00000017956) cgnb (ENSSDUG00000017863) ENSSDUG00000017832 #34 C1orf43 (ENSSDUG00000017804) ubap2l (ENSSDUG00000017703) hax1 (ENSSDUG00000017668) aqp10b (ENSSDUG00000017662) znf687b (ENSSDUG00000017625) psmd4a (ENSSDUG00000017529) pip5k1aa (ENSSDUG00000017460) ENSSDUG00000017446 ENSSDUG00000017434 Barramundi perch MODERN SPECIES 279 scamp3 (ENSLCAG00010022275) ENSLCAG00010022276 lrrc71 (ENSLCAG00010022303) ENSLCAG00010022320 ENSLCAG00010022342 snx27a (ENSLCAG00010022387) #33 chrna11 (ENSLCAG00010022490) icn (ENSLCAG00010022492) s100a10a (ENSLCAG00010022493) trim46b (ENSLCAG00010022498) dpm3 (ENSLCAG00010022499) efna1a (ENSLCAG00010022500) ENSLCAG00010022502 cks1b (ENSLCAG00010022503) ENSLCAG00010022506 ENSLCAG00010022508 #22 s100u (ENSLCAG00010022510) s100s (ENSLCAG00010022513) ENSLCAG00010022515 SHE (ENSLCAG00010022518) pygo2 (ENSLCAG00010022519) cgnb (ENSLCAG00010022529) ENSLCAG00010022566 #34 C1orf43 (ENSLCAG00010022574) hax1 (ENSLCAG00010022581) aqp10b (ENSLCAG00010022583) znf687b (ENSLCAG00010022589) psmd4a (ENSLCAG00010022594) pip5k1aa (ENSLCAG00010022604) ENSLCAG00010022630 ENSLCAG00010022636 Anabantaria ANCESTRAL SPECIES 16 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000171101 ENSGT00950000183155.a.b.a.a.b.c.a ENSGT00940000154703.i Zig-zag eel MODERN SPECIES 2 scamp3 (ENSMAMG00000001304) ENSMAMG00000001258 ENSMAMG00000001205 ENSMAMG00000001166 ENSMAMG00000000628 ENSMAMG00000000580 snx27a (ENSMAMG00000000511) #33 ENSMAMG00000027096 s100a10a (ENSMAMG00000000471) trim46b (ENSMAMG00000000378) dpm3 (ENSMAMG00000016864) efna1a (ENSMAMG00000016844) ENSMAMG00000016832 cks1b (ENSMAMG00000026635) ENSMAMG00000016808 ENSMAMG00000024973 #22 ENSMAMG00000024745 s100s (ENSMAMG00000016687) ENSMAMG00000016681 pygo2 (ENSMAMG00000016672) cgnb (ENSMAMG00000016664) ENSMAMG00000025598 #34 C1orf43 (ENSMAMG00000016647) ubap2l (ENSMAMG00000016602) hax1 (ENSMAMG00000025191) aqp10b (ENSMAMG00000016569) znf687b (ENSMAMG00000016586) ENSMAMG00000016545 PIP5K1A (ENSMAMG00000016488) ENSMAMG00000016460 ENSMAMG00000016435 Anabantoidei ANCESTRAL SPECIES 19 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920 ENSGT00940000165795.d ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.a #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000171101 ENSGT00950000183155.a.b.a.a.b.d ENSGT00950000183155.a.b.a.a.b.c.a Climbing perch MODERN SPECIES 2 ENSATEG00000008972 ash1l (ENSATEG00000009017) lrrc71 (ENSATEG00000027205) ENSATEG00000009100 ENSATEG00000009118 ENSATEG00000009317 ENSATEG00000009350 #33 ENSATEG00000009392 ENSATEG00000009397 trim46b (ENSATEG00000009408) dpm3 (ENSATEG00000009449) efna1a (ENSATEG00000009466) ENSATEG00000009499 ENSATEG00000009515 ENSATEG00000009526 ENSATEG00000026985 #22 s100u (ENSATEG00000029655) s100s (ENSATEG00000009549) ENSATEG00000009557 pygo2 (ENSATEG00000009563) cgnb (ENSATEG00000009585) ENSATEG00000028947 #34 C1orf43 (ENSATEG00000009719) ubap2l (ENSATEG00000009768) hax1 (ENSATEG00000009809) aqp10b (ENSATEG00000009841) znf687b (ENSATEG00000010098) ENSATEG00000010117 ENSATEG00000010129 ENSATEG00000010183 ENSATEG00000010203 Siamese fighting fish MODERN SPECIES 2 ENSBSLG00000016284 ash1l (ENSBSLG00000016270) lrrc71 (ENSBSLG00000016260) ENSBSLG00000016255 ENSBSLG00000016250 chrna11 (ENSBSLG00000016192) snx27a (ENSBSLG00000016097) #33 ENSBSLG00000016079 s100a10b (ENSBSLG00000016077) trim46b (ENSBSLG00000016069) dpm3 (ENSBSLG00000016066) efna1a (ENSBSLG00000016065) ENSBSLG00000016062 cks1b (ENSBSLG00000016050) ENSBSLG00000016041 ENSBSLG00000016034 #22 ENSBSLG00000016029 s100s (ENSBSLG00000016024) SHE (ENSBSLG00000016017) pygo2 (ENSBSLG00000016016) ENSBSLG00000016008 #34 C1orf43 (ENSBSLG00000016003) ubap2l (ENSBSLG00000015899) hax1 (ENSBSLG00000015884) aqp10b (ENSBSLG00000015875) znf687b (ENSBSLG00000015865) psmd4a (ENSBSLG00000015665) pip5k1aa (ENSBSLG00000015580) ENSBSLG00000015563 ENSBSLG00000015548 ndufv1 (ENSBSLG00000014918) Cod MODERN SPECIES 14 ash1l (ENSGMOG00000026862) lrrc71 (ENSGMOG00000027589) ENSGMOG00000005839 ENSGMOG00000005850 chrna11 (ENSGMOG00000014782) snx27a (ENSGMOG00000019441) #33 ENSGMOG00000019446 ENSGMOG00000030600 s100a10a (ENSGMOG00000030248) trim46b (ENSGMOG00000010964) dpm3 (ENSGMOG00000020118) efna1a (ENSGMOG00000033783) ENSGMOG00000010947 cks1b (ENSGMOG00000023116) ENSGMOG00000024951 ENSGMOG00000030357 #22 ENSGMOG00000036869 s100s (ENSGMOG00000010913) ENSGMOG00000030274 pygo2 (ENSGMOG00000035346) cgnb (ENSGMOG00000010860) ENSGMOG00000010849 #34 C1orf43 (ENSGMOG00000010839) ubap2l (ENSGMOG00000010809) hax1 (ENSGMOG00000010798) ENSGMOG00000033416 aqp10b (ENSGMOG00000010790) znf687b (ENSGMOG00000027293) ENSGMOG00000032053 mrps21 (ENSGMOG00000027109) ENSGMOG00000032572 Osteoglossiformes ANCESTRAL SPECIES 307 ENSGT00940000156698.b ENSGT00440000034367 ENSGT00950000182904.a.a.a.a.b ENSGT00940000164921.b ENSGT00940000162189 ENSGT00940000158021.b ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00940000160040.A.a ENSGT00950000182971.B.b ENSGT00940000154172.a #22 ENSGT00940000171931 ENSGT00940000165956.b ENSGT00940000158417.b.l ENSGT00940000159107.i.d ENSGT00530000063948.a ENSGT00940000154489.B.a Asian bonytongue MODERN SPECIES 9 KCNN3 (ENSSFOG00015010219) adar (ENSSFOG00015021716) ENSSFOG00015021703 snx27b (ENSSFOG00015021679) #33 icn (ENSSFOG00015021668) s100a10a (ENSSFOG00015021665) krtcap2 (ENSSFOG00015024681) TRIM46 (ENSSFOG00015021605) slc50a1 (ENSSFOG00015021595) efna1b (ENSSFOG00015024930) efna3b (ENSSFOG00015029082) ENSSFOG00015021538 flad1 (ENSSFOG00015021517) SHC1 (ENSSFOG00015024633) pbxip1b (ENSSFOG00015021426) ENSSFOG00015021416 #22 ENSSFOG00015021411 s100t (ENSSFOG00015021408) CHRNB2 (ENSSFOG00015021395) SHE (ENSSFOG00015021381) ENSSFOG00015021353 tuft1a (ENSSFOG00015021323) #34 zgc:123238 (ENSSFOG00015021301) ubap2l (ENSSFOG00015021253) ENSSFOG00015021230 aqp10a (ENSSFOG00015021163) ENSSFOG00015021129 ENSSFOG00015021105 RIIAD1 (ENSSFOG00015030907) #31 znf687b (ENSSFOG00015021090) pip5k1ab (ENSSFOG00015021078) Osteoglossocephalai ANCESTRAL SPECIES 38 ENSGT00940000164921.a ENSGT00950000183212.C #33 ENSGT00390000000920 ENSGT00940000165795 ENSGT00390000003552 ENSGT00940000158021 ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT00940000171931 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000154489.B.b ENSGT00950000183065.B #34 ENSGT00510000047366 Clupeocephala ANCESTRAL SPECIES 127 ENSGT00940000154716.gc.b #32 ENSGT00940000154716.hc #32 ENSGT00950000183094.a.n ENSGT00390000018360.b ENSGT00940000166610 ENSGT00940000157619.a.b ENSGT00940000160917 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.b.a ENSGT00390000008892 ENSGT00940000159919.b ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.b #22 ENSGT00940000171931 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00940000162698 #35 ENSGT00950000183065.B.e #34 ENSGT00510000047366 ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000154703.i Euteleosteomorpha ANCESTRAL SPECIES 59 ENSGT00390000003552 ENSGT00960000192046 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00990000204073 ENSGT00940000162071 ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000166466.f ENSGT00940000154172.b #22 ENSGT00940000171931 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Acanthomorphata ANCESTRAL SPECIES 9 ENSGT00950000183212.C.c.b #33 ENSGT00960000187253 ENSGT00940000165795.c ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT00940000171931 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Euacanthomorphacea ANCESTRAL SPECIES ENSGT00950000183212.C.c.b #33 ENSGT00960000187253 ENSGT00940000165795.c ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT00940000171931 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Percomorphaceae ANCESTRAL SPECIES ENSGT00950000183212.C.c.b #33 ENSGT01100000266029 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Percomorphaceae_B ANCESTRAL SPECIES 1 ENSGT01100000263591 ENSGT01100000263852 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Ovalentaria ANCESTRAL SPECIES 3 ENSGT01100000263852 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Atherinomorphae ANCESTRAL SPECIES ENSGT01100000263591 ENSGT01100000263852 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Cyprinodontiformes ANCESTRAL SPECIES ENSGT01100000263591 ENSGT01100000263852 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00940000172009 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Cyprinodontoidei ANCESTRAL SPECIES ENSGT00950000183212.C.c.b #33 ENSGT01100000263591 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B.d ENSGT00940000164368.B.c ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00940000172009 ENSGT00950000182957.a.b ENSGT00940000156524.b Poeciliinae ANCESTRAL SPECIES ENSGT00950000183212.C.c.b #33 ENSGT01100000263591 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B.d ENSGT00940000164368.B.c ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00940000172009 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Poecilia ANCESTRAL SPECIES ENSGT00950000183212.C.c.b #33 ENSGT01100000263591 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01100000265170 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B.d ENSGT00940000164368.B.c ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00940000172009 ENSGT00950000182957.a.b ENSGT00940000156524.b Guppy MODERN SPECIES 446 SNX27 (ENSPREG00000017408) #33 ENSPREG00000017393 ENSPREG00000017383 ENSPREG00000017367 krtcap2 (ENSPREG00000017340) TMEM107 (ENSPREG00000017327) TRIM46 (ENSPREG00000017292) slc50a1 (ENSPREG00000017252) efna1b (ENSPREG00000017235) efna3b (ENSPREG00000017222) ENSPREG00000017201 flad1 (ENSPREG00000017162) SHC1 (ENSPREG00000017101) lenep (ENSPREG00000017078) pbxip1b (ENSPREG00000017053) s100a11 (ENSPREG00000017025) #22 ENSPREG00000017012 s100t (ENSPREG00000017006) CHRNB2 (ENSPREG00000016997) SHE (ENSPREG00000016960) ENSPREG00000016930 tuft1a (ENSPREG00000016908) #34 C1orf43 (ENSPREG00000016893) ENSPREG00000016882 aqp10a (ENSPREG00000016869) aqp10a (ENSPREG00000016859) ENSPREG00000016733 ENSPREG00000016686 ENSPREG00000016675 znf687a (ENSPREG00000016654) psmd4b (ENSPREG00000016628) NAME_6 ANCESTRAL SPECIES 36 ENSGT00940000164921.a ENSGT00950000183212.C.c.b #33 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01100000265170 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B.d ENSGT00940000164368.B.c ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00940000172009 ENSGT00950000182957.a.b ENSGT00940000156524.b Sailfin molly MODERN SPECIES 1637 SHC1 (ENSPLAG00000009465) lenep (ENSPLAG00000009414) ENSPLAG00000009395 s100a11 (ENSPLAG00000009307) #22 ENSPLAG00000009250 s100t (ENSPLAG00000009244) CHRNB2 (ENSPLAG00000009217) SHE (ENSPLAG00000009192) ENSPLAG00000009188 NAME_4 ANCESTRAL SPECIES 1 ENSGT00950000183212.C.c.b #33 ENSGT01100000263591.j ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B.d ENSGT00940000164368.B.c ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b Mummichog MODERN SPECIES 2225 ENSFHEG00000020863 s100a10b (ENSFHEG00000020856) krtcap2 (ENSFHEG00000020842) tmem107 (ENSFHEG00000020827) TRIM46 (ENSFHEG00000020799) slc50a1 (ENSFHEG00000020767) efna1b (ENSFHEG00000020759) efna3b (ENSFHEG00000020737) ENSFHEG00000020730 flad1 (ENSFHEG00000020718) SHC1 (ENSFHEG00000020675) lenep (ENSFHEG00000020570) pbxip1b (ENSFHEG00000020553) ENSFHEG00000020545 ENSFHEG00000020536 s100a11 (ENSFHEG00000020526) #22 ENSFHEG00000000602 s100t (ENSFHEG00000020504) CHRNB2 (ENSFHEG00000020499) SHE (ENSFHEG00000020485) ENSFHEG00000020442 tuft1a (ENSFHEG00000020428) #34 C1orf43 (ENSFHEG00000000510) ENSFHEG00000020395 aqp10a (ENSFHEG00000020370) aqp10a (ENSFHEG00000019420) ENSFHEG00000019329 ENSFHEG00000000494 ENSFHEG00000019129 ENSFHEG00000019052 #31 ENSFHEG00000019044 Sheepshead minnow MODERN SPECIES 329 ENSCVAG00000023009 ENSCVAG00000000593 ENSCVAG00000023016 s100a10b (ENSCVAG00000023020) krtcap2 (ENSCVAG00000023038) TMEM107 (ENSCVAG00000023060) TRIM46 (ENSCVAG00000023082) slc50a1 (ENSCVAG00000023092) efna1b (ENSCVAG00000023094) ENSCVAG00000023112 ENSCVAG00000023120 flad1 (ENSCVAG00000023182) SHC1 (ENSCVAG00000023208) lenep (ENSCVAG00000023213) pbxip1b (ENSCVAG00000023220) s100a11 (ENSCVAG00000023237) #22 ENSCVAG00000023247 s100t (ENSCVAG00000023254) CHRNB2 (ENSCVAG00000023298) SHE (ENSCVAG00000023317) ENSCVAG00000023329 tuft1a (ENSCVAG00000004998) #34 C1orf43 (ENSCVAG00000005010) ENSCVAG00000005029 aqp10a (ENSCVAG00000005050) aqp10a (ENSCVAG00000005080) ENSCVAG00000005163 ENSCVAG00000005182 Oryzias ANCESTRAL SPECIES 2 ENSGT01100000263591 ENSGT01100000263852 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Oryzias_b ANCESTRAL SPECIES 1 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827.d ENSGT00940000159919.a.b ENSGT00390000014827.c ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Indian medaka MODERN SPECIES 5 ENSOMEG00000007606 ENSOMEG00000007580 s100a10b (ENSOMEG00000007561) krtcap2 (ENSOMEG00000007547) ENSOMEG00000007500 ENSOMEG00000007437 ENSOMEG00000007402 TRIM46 (ENSOMEG00000000180) slc50a1 (ENSOMEG00000007302) efna1b (ENSOMEG00000007282) efna3b (ENSOMEG00000007246) ENSOMEG00000007209 flad1 (ENSOMEG00000007191) SHC1 (ENSOMEG00000007138) pbxip1b (ENSOMEG00000007035) s100a11 (ENSOMEG00000006979) #22 ENSOMEG00000006969 s100t (ENSOMEG00000006947) CHRNB2 (ENSOMEG00000006932) SHE (ENSOMEG00000006894) ENSOMEG00000006860 tuft1a (ENSOMEG00000006784) #34 C1orf43 (ENSOMEG00000006745) ENSOMEG00000006726 aqp10a (ENSOMEG00000006694) ENSOMEG00000006652 ENSOMEG00000006484 ENSOMEG00000006440 znf687a (ENSOMEG00000006384) psmd4b (ENSOMEG00000006340) pip5k1ab (ENSOMEG00000006274) Javanese ricefish MODERN SPECIES 7 s100a10b (ENSOJAG00000017997) krtcap2 (ENSOJAG00000017971) ENSOJAG00000017940 ENSOJAG00000017923 ENSOJAG00000017917 ENSOJAG00000017887 TRIM46 (ENSOJAG00000017661) slc50a1 (ENSOJAG00000017644) efna1b (ENSOJAG00000017628) efna3b (ENSOJAG00000017624) ENSOJAG00000017614 flad1 (ENSOJAG00000017597) SHC1 (ENSOJAG00000017554) lenep (ENSOJAG00000017545) ENSOJAG00000017518 s100a11 (ENSOJAG00000017506) #22 ENSOJAG00000017498 s100t (ENSOJAG00000017487) CHRNB2 (ENSOJAG00000017483) SHE (ENSOJAG00000017477) ENSOJAG00000017433 tuft1a (ENSOJAG00000017422) #34 C1orf43 (ENSOJAG00000017415) ENSOJAG00000017409 aqp10a (ENSOJAG00000017401) ENSOJAG00000015384 ENSOJAG00000015331 ENSOJAG00000015320 #31 ENSOJAG00000015305 znf687a (ENSOJAG00000015161) psmd4b (ENSOJAG00000015047) Oryzias_a ANCESTRAL SPECIES 9 ENSGT01100000263591.n ENSGT01100000263591.m ENSGT01100000263852 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00940000172009 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Japanese Medaka HdrR MODERN SPECIES 7 ENSORLG00000021817 ENSORLG00000026246 krtcap2 (ENSORLG00000022276) tmem107 (ENSORLG00000009892) ENSORLG00000009879 slc50a1 (ENSORLG00000009817) efna1b (ENSORLG00000009810) efna3b (ENSORLG00000028633) ENSORLG00000024317 ENSORLG00000026016 ENSORLG00000009769 ENSORLG00000024740 ENSORLG00000030063 SHC1 (ENSORLG00000009745) pbxip1b (ENSORLG00000030223) s100a11 (ENSORLG00000030520) #22 ENSORLG00000025488 s100t (ENSORLG00000009724) CHRNB2 (ENSORLG00000009700) SHE (ENSORLG00000024988) ENSORLG00000009675 tuft1a (ENSORLG00000009652) #34 ENSORLG00000009633 ENSORLG00000027199 aqp10a (ENSORLG00000009610) ENSORLG00000009604 ENSORLG00000028968 ENSORLG00000025215 ENSORLG00000027159 znf687a (ENSORLG00000009548) psmd4b (ENSORLG00000009532) Ovalentaria_B ANCESTRAL SPECIES 1 ENSGT00950000183212.C.c.b #33 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Cichlidae ANCESTRAL SPECIES 9 ENSGT00950000183212.C.c.b #33 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT00940000177151 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b Pseudocrenilabrinae ANCESTRAL SPECIES 2 ENSGT00940000164921.a ENSGT00950000183212.C.c.b #33 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT00940000177151 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b Nile tilapia MODERN SPECIES 2 ENSONIG00000006328 SNX27 (ENSONIG00000006322) #33 ENSONIG00000032138 s100a10b (ENSONIG00000006321) krtcap2 (ENSONIG00000031207) tmem107 (ENSONIG00000028989) TRIM46 (ENSONIG00000006313) slc50a1 (ENSONIG00000006310) efna1b (ENSONIG00000034004) efna3b (ENSONIG00000006304) ENSONIG00000034907 flad1 (ENSONIG00000006301) SHC1 (ENSONIG00000006295) lenep (ENSONIG00000029810) pbxip1b (ENSONIG00000032523) s100a11 (ENSONIG00000042286) #22 ENSONIG00000041755 s100t (ENSONIG00000006290) CHRNB2 (ENSONIG00000006286) SHE (ENSONIG00000032975) tuft1 (ENSONIG00000006277) C1orf43 (ENSONIG00000006270) ENSONIG00000040834 aqp10a (ENSONIG00000006266) ENSONIG00000006250 ENSONIG00000033596 ENSONIG00000041322 #31 ENSONIG00000006248 znf687a (ENSONIG00000006242) psmd4b (ENSONIG00000006232) pip5k1ab (ENSONIG00000006226) Pomacentridae ANCESTRAL SPECIES 18 ENSGT01100000264774 ENSGT01100000263852 ENSGT01030000234782 ENSGT00390000003552 ENSGT00940000165795.c ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a Pomacentridae_A ANCESTRAL SPECIES 5 ENSGT01030000234784 ENSGT00940000156893 ENSGT01030000234782 ENSGT00390000003552 ENSGT00940000165795.c ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a Amphiprion ANCESTRAL SPECIES 1 ENSGT00940000156893 ENSGT00940000155356.d.b.b.b.a.c.b.a.b ENSGT01030000234782 ENSGT00390000003552 ENSGT00940000165795.c ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a Clown anemonefish MODERN SPECIES 635 ENSAOCG00000005884 ca10a (ENSAOCG00000005869) ENSAOCG00000005845 ENSAOCG00000005830 mrpl27 (ENSAOCG00000005820) ENSAOCG00000005802 ENSAOCG00000005777 ENSAOCG00000005734 flad1 (ENSAOCG00000005703) SHC1 (ENSAOCG00000005681) pbxip1b (ENSAOCG00000005645) s100a11 (ENSAOCG00000005627) #22 ENSAOCG00000005621 s100t (ENSAOCG00000005611) CHRNB2 (ENSAOCG00000005607) Orange clownfish MODERN SPECIES 21 ca14 (ENSAPEG00000004009) ENSAPEG00000003957 ENSAPEG00000003946 krtcap2 (ENSAPEG00000003919) ENSAPEG00000003904 TMEM107 (ENSAPEG00000003891) TRIM46 (ENSAPEG00000003853) slc50a1 (ENSAPEG00000003836) efna1b (ENSAPEG00000003805) efna3b (ENSAPEG00000003781) ENSAPEG00000003741 flad1 (ENSAPEG00000003678) SHC1 (ENSAPEG00000003622) lenep (ENSAPEG00000003607) pbxip1b (ENSAPEG00000003593) s100a11 (ENSAPEG00000003521) #22 ENSAPEG00000003505 s100t (ENSAPEG00000003495) CHRNB2 (ENSAPEG00000003466) SHE (ENSAPEG00000003405) ENSAPEG00000003380 tuft1a (ENSAPEG00000003370) #34 C1orf43 (ENSAPEG00000003365) ENSAPEG00000003355 aqp10a (ENSAPEG00000003280) ENSAPEG00000003173 ENSAPEG00000003149 ENSAPEG00000003136 #31 ENSAPEG00000003116 znf687a (ENSAPEG00000003100) psmd4b (ENSAPEG00000003043) Bicolor damselfish MODERN SPECIES 815 ENSSPAG00000017899 ENSSPAG00000017930 flad1 (ENSSPAG00000017964) SHC1 (ENSSPAG00000018006) lenep (ENSSPAG00000018030) pbxip1b (ENSSPAG00000018041) s100a11 (ENSSPAG00000018075) #22 ENSSPAG00000018121 s100t (ENSSPAG00000018140) CHRNB2 (ENSSPAG00000018169) SHE (ENSSPAG00000018221) CGN (ENSSPAG00000018228) tuft1a (ENSSPAG00000018310) #34 Percomorphaceae_C ANCESTRAL SPECIES 2 ENSGT01100000263591 ENSGT01100000263852 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Eupercaria ANCESTRAL SPECIES 1 ENSGT01100000263591 ENSGT01100000263852 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Eupecaria_A ANCESTRAL SPECIES 2 ENSGT01100000263591 ENSGT01100000263852 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Ballan wrasse MODERN SPECIES 174 NPAS3 (ENSLBEG00000004799) egln3 (ENSLBEG00000004818) ENSLBEG00000004850 sptssa (ENSLBEG00000004865) eapp (ENSLBEG00000004887) PRKD1 (ENSLBEG00000004909) ENSLBEG00000004964 foxg1a (ENSLBEG00000004975) ENSLBEG00000005004 ENSLBEG00000005027 ENSLBEG00000005068 flad1 (ENSLBEG00000005108) SHC1 (ENSLBEG00000005176) lenep (ENSLBEG00000005250) ENSLBEG00000005266 s100a11 (ENSLBEG00000005309) #22 ENSLBEG00000005321 s100t (ENSLBEG00000005335) CHRNB2 (ENSLBEG00000005352) SHE (ENSLBEG00000005361) ENSLBEG00000005375 tuft1a (ENSLBEG00000005392) #34 C1orf43 (ENSLBEG00000005416) ENSLBEG00000005465 aqp10a (ENSLBEG00000005505) ENSLBEG00000005570 ENSLBEG00000005656 ENSLBEG00000005671 #31 ENSLBEG00000005688 znf687a (ENSLBEG00000005738) psmd4b (ENSLBEG00000005775) Eupecaria_B ANCESTRAL SPECIES 4 ENSGT01100000263591.d ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Eupecaria_C ANCESTRAL SPECIES 2 ENSGT00950000183212.C.c.b #33 ENSGT01100000263591.d ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Gilthead seabream MODERN SPECIES 8 ENSSAUG00010014920 ENSSAUG00010014918 ENSSAUG00010014913 ENSSAUG00010014911 krtcap2 (ENSSAUG00010014905) tmem107 (ENSSAUG00010014901) TRIM46 (ENSSAUG00010014877) slc50a1 (ENSSAUG00010014868) efna1b (ENSSAUG00010014867) efna3b (ENSSAUG00010014864) ENSSAUG00010014863 flad1 (ENSSAUG00010014857) SHC1 (ENSSAUG00010014819) lenep (ENSSAUG00010019319) pbxip1b (ENSSAUG00010019317) s100a11 (ENSSAUG00010019315) #22 ENSSAUG00010019313 s100t (ENSSAUG00010019311) CHRNB2 (ENSSAUG00010019309) SHE (ENSSAUG00010019306) ENSSAUG00010019298 tuft1a (ENSSAUG00010019296) #34 C1orf43 (ENSSAUG00010019293) ENSSAUG00010019292 aqp10a (ENSSAUG00010018987) ENSSAUG00010018632 ENSSAUG00010018609 ENSSAUG00010018608 #31 ENSSAUG00010018606 znf687a (ENSSAUG00010018604) PSMD4 (ENSSAUG00010018503) Eupercaria_incertae_sedis ANCESTRAL SPECIES 2 ENSGT00950000183212.C.c.b #33 ENSGT01100000263591.d ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00940000172009 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Large yellow croaker MODERN SPECIES 484 SNX27 (ENSLCRG00005009012) #33 ENSLCRG00005009363 ENSLCRG00005009364 s100a10b (ENSLCRG00005009365) krtcap2 (ENSLCRG00005009366) tmem107 (ENSLCRG00005009367) TRIM46 (ENSLCRG00005009368) slc50a1 (ENSLCRG00005009680) efna1b (ENSLCRG00005009684) efna3b (ENSLCRG00005009686) ENSLCRG00005009688 flad1 (ENSLCRG00005009691) SHC1 (ENSLCRG00005009700) lenep (ENSLCRG00005009971) pbxip1b (ENSLCRG00005009973) s100a11 (ENSLCRG00005009975) #22 ENSLCRG00005009976 s100t (ENSLCRG00005009977) CHRNB2 (ENSLCRG00005009978) SHE (ENSLCRG00005009979) ENSLCRG00005009981 tuft1a (ENSLCRG00005009986) #34 C1orf43 (ENSLCRG00005009988) ENSLCRG00005009989 aqp10a (ENSLCRG00005009990) ENSLCRG00005010031 ENSLCRG00005014113 ENSLCRG00005014115 ENSLCRG00005014117 znf687a (ENSLCRG00005014119) psmd4b (ENSLCRG00005014122) European seabass MODERN SPECIES 6 ENSDLAG00005031608 ENSDLAG00005029215 ENSDLAG00005029315 ENSDLAG00005012140 ENSDLAG00005012190 ENSDLAG00005026731 ENSDLAG00005012221 slc50a1 (ENSDLAG00005012267) efna1b (ENSDLAG00005012283) efna3b (ENSDLAG00005029933) ENSDLAG00005012305 ENSDLAG00005012366 flad1 (ENSDLAG00005012324) lenep (ENSDLAG00005031514) pbxip1b (ENSDLAG00005012389) ENSDLAG00005029586 #22 ENSDLAG00005012297 s100t (ENSDLAG00005028111) ENSDLAG00005012441 ENSDLAG00005012461 ENSDLAG00005012474 tuft1a (ENSDLAG00005012514) #34 ENSDLAG00005012533 ENSDLAG00005012540 ENSDLAG00005012816 ENSDLAG00005026684 znf687a (ENSDLAG00005013693) psmd4b (ENSDLAG00005013701) PIP5K1A (ENSDLAG00005013768) ENSDLAG00005013890 ENSDLAG00005013897 Perciformes ANCESTRAL SPECIES 3 ENSGT00950000183212.C.c.b #33 ENSGT01100000263591.c.a ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a Cottioidei ANCESTRAL SPECIES 7 ENSGT00940000164921.a ENSGT00950000183212.C.c.b #33 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00940000172009 ENSGT00940000156524.b ENSGT00530000064050.b ENSGT00940000154703.j Lumpfish MODERN SPECIES 7 ENSCLMG00005012774 ENSCLMG00005012773 ENSCLMG00005012770 s100a10b (ENSCLMG00005012769) krtcap2 (ENSCLMG00005012768) TMEM107 (ENSCLMG00005012767) TRIM46 (ENSCLMG00005012675) slc50a1 (ENSCLMG00005012673) efna1b (ENSCLMG00005012672) efna3b (ENSCLMG00005012671) ENSCLMG00005012668 flad1 (ENSCLMG00005012661) SHC1 (ENSCLMG00005012280) lenep (ENSCLMG00005012269) ENSCLMG00005012268 s100a11 (ENSCLMG00005012266) #22 ENSCLMG00005012265 s100t (ENSCLMG00005012264) CHRNB2 (ENSCLMG00005012263) SHE (ENSCLMG00005012262) ENSCLMG00005012261 tuft1a (ENSCLMG00005012260) #34 C1orf43 (ENSCLMG00005012259) ENSCLMG00005012258 aqp10a (ENSCLMG00005012161) ENSCLMG00005012160 ENSCLMG00005012159 ENSCLMG00005012158 znf687a (ENSCLMG00005012157) psmd4b (ENSCLMG00005012156) pip5k1ab (ENSCLMG00005011635) Perciformes_a ANCESTRAL SPECIES 3 ENSGT00950000183212.C.c.b #33 ENSGT01100000263591.c.a ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000162071 ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00940000156524.b ENSGT00530000064050.b ENSGT01100000263515.a.b.a.b.b.k.a.a.a Channel bull blenny MODERN SPECIES 7 ENSCGOG00000008151 ENSCGOG00000008154 ENSCGOG00000008157 s100a10b (ENSCGOG00000008160) krtcap2 (ENSCGOG00000008161) tmem107 (ENSCGOG00000008165) TRIM46 (ENSCGOG00000008192) slc50a1 (ENSCGOG00000008491) efna1b (ENSCGOG00000008494) efna3b (ENSCGOG00000008496) ENSCGOG00000008498 flad1 (ENSCGOG00000008505) SHC1 (ENSCGOG00000008578) lenep (ENSCGOG00000008587) pbxip1b (ENSCGOG00000008590) s100a11 (ENSCGOG00000008603) #22 ENSCGOG00000008608 s100t (ENSCGOG00000008612) CHRNB2 (ENSCGOG00000008616) SHE (ENSCGOG00000008620) ENSCGOG00000008624 tuft1a (ENSCGOG00000008627) #34 C1orf43 (ENSCGOG00000008628) ENSCGOG00000008632 aqp10a (ENSCGOG00000008642) ENSCGOG00000009030 ENSCGOG00000009118 ENSCGOG00000009129 #31 znf687a (ENSCGOG00000009133) psmd4b (ENSCGOG00000009141) ENSCGOG00000009291 Pike perch MODERN SPECIES 15 ENSSLUG00000012163 ENSSLUG00000012160 ENSSLUG00000012150 ENSSLUG00000012146 krtcap2 (ENSSLUG00000012136) tmem107 (ENSSLUG00000012122) TRIM46 (ENSSLUG00000012114) slc50a1 (ENSSLUG00000012104) efna1b (ENSSLUG00000012098) efna3b (ENSSLUG00000012090) ENSSLUG00000012083 flad1 (ENSSLUG00000011868) SHC1 (ENSSLUG00000011823) lenep (ENSSLUG00000011815) pbxip1b (ENSSLUG00000011806) s100a11 (ENSSLUG00000011804) #22 ENSSLUG00000011797 s100t (ENSSLUG00000011791) CHRNB2 (ENSSLUG00000011719) ENSSLUG00000011708 ENSSLUG00000011703 tuft1a (ENSSLUG00000011695) #34 C1orf43 (ENSSLUG00000011690) ENSSLUG00000011674 ENSSLUG00000011293 ENSSLUG00000011209 ENSSLUG00000011193 #31 znf687a (ENSSLUG00000011183) psmd4b (ENSSLUG00000011032) ENSSLUG00000011011 pip5k1ab (ENSSLUG00000010721) Percomorphaceae_D ANCESTRAL SPECIES 2 ENSGT01100000263591 ENSGT01100000263852 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Carangaria ANCESTRAL SPECIES 1 ENSGT01100000263591 ENSGT01100000263852 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Pleuronectoidei ANCESTRAL SPECIES 3 ENSGT01100000263591 ENSGT01100000266029 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Tongue sole MODERN SPECIES 4 ENSCSEG00000002205 ENSCSEG00000002203 ENSCSEG00000002199 ENSCSEG00000002186 TMEM107 (ENSCSEG00000002170) TRIM46 (ENSCSEG00000002159) slc50a1 (ENSCSEG00000002153) efna1b (ENSCSEG00000002151) efna3b (ENSCSEG00000002147) ENSCSEG00000002140 ENSCSEG00000002137 ENSCSEG00000002135 ENSCSEG00000002129 SHC1 (ENSCSEG00000002094) pbxip1b (ENSCSEG00000002079) s100a11 (ENSCSEG00000002078) #22 ENSCSEG00000002074 s100t (ENSCSEG00000002071) CHRNB2 (ENSCSEG00000002067) SHE (ENSCSEG00000002066) ENSCSEG00000002061 tuft1a (ENSCSEG00000002057) #34 ENSCSEG00000002053 C1orf43 (ENSCSEG00000002038) aqp10a (ENSCSEG00000002033) ENSCSEG00000002013 ENSCSEG00000002008 ENSCSEG00000002003 ENSCSEG00000001975 znf687a (ENSCSEG00000001965) psmd4b (ENSCSEG00000001952) Carangaria_A ANCESTRAL SPECIES 9 ENSGT00950000183212.C.c.b #33 ENSGT01100000263591 ENSGT01100000263852 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00390000003062 #31 ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b Barramundi perch MODERN SPECIES 185 ENSLCAG00010025370 ENSLCAG00010025372 ENSLCAG00010025375 ENSLCAG00010025377 s100a10b (ENSLCAG00010025380) krtcap2 (ENSLCAG00010025384) tmem107 (ENSLCAG00010025389) TRIM46 (ENSLCAG00010025407) slc50a1 (ENSLCAG00010025427) efna1b (ENSLCAG00010025430) efna3b (ENSLCAG00010025431) ENSLCAG00010025434 flad1 (ENSLCAG00010025436) SHC1 (ENSLCAG00010025450) pbxip1b (ENSLCAG00010025472) s100a11 (ENSLCAG00010025475) #22 ENSLCAG00010025479 s100t (ENSLCAG00010025480) CHRNB2 (ENSLCAG00010025484) SHE (ENSLCAG00010025488) CGN (ENSLCAG00010025500) tuft1a (ENSLCAG00010025513) #34 C1orf43 (ENSLCAG00010025516) ENSLCAG00010025520 aqp10a (ENSLCAG00010025522) ENSLCAG00010025583 ENSLCAG00010025612 ENSLCAG00010025613 #31 ENSLCAG00010025617 Seriola ANCESTRAL SPECIES 28 ENSGT00940000164921.a ENSGT00950000183212.C.c.b #33 ENSGT01100000263591 ENSGT01030000234782 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00730000111747.a ENSGT00940000154172.b #22 ENSGT01030000234835 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b Yellowtail amberjack MODERN SPECIES 2802 ENSSLDG00000014246 SNX27 (ENSSLDG00000014313) #33 ENSSLDG00000014364 ENSSLDG00000014379 ENSSLDG00000014387 krtcap2 (ENSSLDG00000014402) tmem107 (ENSSLDG00000014421) TRIM46 (ENSSLDG00000014453) slc50a1 (ENSSLDG00000014498) efna1b (ENSSLDG00000014522) efna3b (ENSSLDG00000014530) ENSSLDG00000014545 flad1 (ENSSLDG00000014561) SHC1 (ENSSLDG00000014623) pbxip1b (ENSSLDG00000014671) s100a11 (ENSSLDG00000014692) #22 ENSSLDG00000014701 s100t (ENSSLDG00000014708) CHRNB2 (ENSSLDG00000014720) SHE (ENSSLDG00000014731) ENSSLDG00000014750 tuft1a (ENSSLDG00000014770) #34 C1orf43 (ENSSLDG00000014787) ENSSLDG00000014811 aqp10a (ENSSLDG00000014846) ENSSLDG00000014889 Pinecone sodierfish MODERN SPECIES 7 ENSMMDG00005015405 SNX27 (ENSMMDG00005015389) #33 s100w (ENSMMDG00005015374) ENSMMDG00005015373 krtcap2 (ENSMMDG00005015368) TMEM107 (ENSMMDG00005015360) TRIM46 (ENSMMDG00005015299) slc50a1 (ENSMMDG00005015284) efna1b (ENSMMDG00005015282) efna3b (ENSMMDG00005015277) ENSMMDG00005015274 flad1 (ENSMMDG00005015268) SHC1 (ENSMMDG00005014933) lenep (ENSMMDG00005014928) pbxip1b (ENSMMDG00005014925) s100a11 (ENSMMDG00005014923) #22 ENSMMDG00005014921 s100t (ENSMMDG00005014919) CHRNB2 (ENSMMDG00005014916) SHE (ENSMMDG00005014913) ENSMMDG00005014792 tuft1a (ENSMMDG00005014750) #34 C1orf43 (ENSMMDG00005014738) ENSMMDG00005014733 aqp10a (ENSMMDG00005014315) ENSMMDG00005014297 ENSMMDG00005014288 ENSMMDG00005014282 ENSMMDG00005014279 znf687a (ENSMMDG00005014271) psmd4b (ENSMMDG00005014264) Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES 1 ENSGT00960000187253 ENSGT00940000162189 ENSGT00390000003552 ENSGT00390000014827 ENSGT00940000158021.d ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000162071 ENSGT00940000160040.A ENSGT00990000204073 ENSGT00390000007266 ENSGT00950000182870.a.a.b.q ENSGT00390000002996 ENSGT00730000111747.a ENSGT00940000166466.f ENSGT00940000154172.b.a #22 ENSGT00940000171931 ENSGT00940000165956 ENSGT00940000158417.b ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e #34 ENSGT00510000047366.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000165692.b ENSGT00940000165521.b ENSGT00950000182957.a.b ENSGT00940000156524.b ENSGT00530000064050.b ENSGT00940000154703.j Salmoninae ANCESTRAL SPECIES 1005 ENSGT00730000111747.a.d ENSGT00940000166466.f.e ENSGT00940000154172.b.a #22 ENSGT00940000171931.d.a ENSGT00940000165956.e.a ENSGT00940000158417.b.g.a Huchen DUPLICATION Huchen MODERN SPECIES 492 ENSHHUG00000049509 ENSHHUG00000049504 ENSHHUG00000049502 ENSHHUG00000049501 mpc1 (ENSHHUG00000049487) ENSHHUG00000049247 rnaset2 (ENSHHUG00000049232) MYOM2 (ENSHHUG00000049198) ENSHHUG00000049188 ENSHHUG00000049181 flad1 (ENSHHUG00000049176) SHC1 (ENSHHUG00000049167) lenep (ENSHHUG00000049162) pbxip1b (ENSHHUG00000049153) ENSHHUG00000049126 s100a11 (ENSHHUG00000049125) #22 ENSHHUG00000049124 s100t (ENSHHUG00000049121) ENSHHUG00000049120 Huchen MODERN SPECIES 3190 flad1 (ENSHHUG00000012112) SHC1 (ENSHHUG00000012135) lenep (ENSHHUG00000012145) pbxip1b (ENSHHUG00000012146) ENSHHUG00000012156 s100a11 (ENSHHUG00000012158) #22 ENSHHUG00000012163 s100t (ENSHHUG00000012184) CHRNB2 (ENSHHUG00000012188) Salmoninae_a ANCESTRAL SPECIES 63 ENSGT00940000158021.d.b.b ENSGT00390000007801.o ENSGT00940000159919.a.e.b ENSGT00940000162071 ENSGT00990000204073.c.b.b ENSGT00390000007266 ENSGT00950000182870.a.a.b.q.b ENSGT00390000002996 ENSGT00730000111747.a.c ENSGT00940000166466.f.f ENSGT00940000171931.d.b ENSGT00940000165956.f ENSGT00940000158417.b.h ENSGT01060000253325 ENSGT00730000111747.a.d ENSGT00940000154172.b.a #22 ENSGT00940000171931.d.a ENSGT00940000165956.e.a ENSGT00940000158417.b.g.a ENSGT00940000159107.j ENSGT00940000154489.B.b ENSGT00950000183065.B.e.b.b #34 ENSGT00510000047366.a.b ENSGT00940000156178.B ENSGT00940000164368.B.i.a ENSGT00940000164368.B.i.b ENSGT00940000165692.b.b ENSGT00940000165521.b ENSGT00950000182957.a.b.t ENSGT00940000156524.b ENSGT00530000064050.b Oncorhynchus ANCESTRAL SPECIES 59 ENSGT00940000158021.d.b.b ENSGT00390000007801.o.b ENSGT00940000159919.a.e.a.d ENSGT00940000166681.j ENSGT00950000182971.B.b.w.b ENSGT00990000204073.c.a.a ENSGT00990000204073.c.b.a ENSGT00390000007266.n ENSGT00950000182870.a.a.b.r ENSGT00390000002996.f ENSGT00730000111747.a.c.c ENSGT00940000166466.f.f ENSGT00940000154172.b.a #22 ENSGT00940000171931.d.a.a ENSGT00940000165956.e.b ENSGT00940000158417.b.h ENSGT00940000159107.j.e.a.a ENSGT00940000154489.B.b.i ENSGT00950000183065.B.e.b.b #34 ENSGT00940000156178.B.i.b ENSGT00940000164368.B.i.b ENSGT00940000165692.b.a.b ENSGT00940000165521.b.m.b ENSGT00940000156524.b.h ENSGT00530000064050.b.c ENSGT00940000154703.j.f ENSGT00390000006215.a.c.d ENSGT00530000064050.b.d Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 21 ENSOMYG00000000608 slc50a1 (ENSOMYG00000000531) efna1b (ENSOMYG00000050706) ENSOMYG00000070892 ENSOMYG00000058017 ENSOMYG00000057687 ENSOMYG00000000425 ENSOMYG00000000419 ENSOMYG00000069587 flad1 (ENSOMYG00000000407) ENSOMYG00000074708 lenep (ENSOMYG00000000340) ENSOMYG00000062803 pbxip1b (ENSOMYG00000000320) ENSOMYG00000000299 ENSOMYG00000000246 #22 ENSOMYG00000000216 s100t (ENSOMYG00000000202) ENSOMYG00000000193 ENSOMYG00000000590 ENSOMYG00000061106 tuft1a (ENSOMYG00000076838) #34 ENSOMYG00000054166 ENSOMYG00000002492 ENSOMYG00000000170 ENSOMYG00000000158 znf687a (ENSOMYG00000032998) psmd4b (ENSOMYG00000032932) PIP5K1A (ENSOMYG00000032256) ENSOMYG00000032162 rorc-like (ENSOMYG00000032146) Rainbow trout MODERN SPECIES 11 slc50a1 (ENSOMYG00000000545) ENSOMYG00000077486 efna1b (ENSOMYG00000000491) ENSOMYG00000058451 ENSOMYG00000076506 ENSOMYG00000059806 ENSOMYG00000064678 ENSOMYG00000056864 flad1 (ENSOMYG00000003129) ENSOMYG00000002895 lenep (ENSOMYG00000054102) ENSOMYG00000074205 ENSOMYG00000048217 ENSOMYG00000073953 ENSOMYG00000053338 ENSOMYG00000002662 #22 ENSOMYG00000060897 s100t (ENSOMYG00000070358) ENSOMYG00000061554 ENSOMYG00000002649 ENSOMYG00000002644 ENSOMYG00000002631 tuft1a (ENSOMYG00000002578) #34 ENSOMYG00000002403 ENSOMYG00000053336 aqp10a (ENSOMYG00000002464) ENSOMYG00000061280 ENSOMYG00000002231 ENSOMYG00000048153 ENSOMYG00000002132 znf687a (ENSOMYG00000002126) Oncorhynchus_a ANCESTRAL SPECIES 85 ENSGT00990000204073.c.a.a ENSGT00990000204073.c.b.a ENSGT00390000007266.n ENSGT00950000182870.a.a.b.r ENSGT00730000111747.a.c.c ENSGT00940000166466.f.f ENSGT00940000165956.e.a ENSGT00940000158417.b.g.a ENSGT00730000111747.a.c.d ENSGT00940000154172.b.a #22 ENSGT00940000171931.d.a.a ENSGT00940000165956.e.b ENSGT00940000158417.b.h ENSGT00940000159107.j.e.a.a ENSGT00940000154489.B.b.i ENSGT00940000156178.B.i.b ENSGT00940000164368.B.i.b ENSGT00940000165692.b.a.b ENSGT00940000165521.b.m.b ENSGT00940000156524.b.h ENSGT00530000064050.b.c ENSGT00940000154703.j.f ENSGT00390000006215.a.c.d ENSGT00940000165521.b.n ENSGT00950000182957.a.b.t Coho salmon DUPLICATION Coho salmon MODERN SPECIES 11 ENSOKIG00005000209 ENSOKIG00005000196 KRTCAP2 (ENSOKIG00005000172) tmem107 (ENSOKIG00005000153) ENSOKIG00005000132 EFNA1 (ENSOKIG00005000122) SLC50A1 (ENSOKIG00005000105) ENSOKIG00005000088 ENSOKIG00005000067 ENSOKIG00005000052 ENSOKIG00005013279 flad1 (ENSOKIG00005013111) SHC1 (ENSOKIG00005012926) pbxip1b (ENSOKIG00005012897) ENSOKIG00005012871 ENSOKIG00005012855 #22 ENSOKIG00005012839 s100t (ENSOKIG00005012828) CHRNB2 (ENSOKIG00005012820) SHE (ENSOKIG00005012811) ENSOKIG00005012761 C1orf43 (ENSOKIG00005012723) ENSOKIG00005012711 ENSOKIG00005012704 aqp10a (ENSOKIG00005012654) ENSOKIG00005012605 ENSOKIG00005012535 znf687a (ENSOKIG00005012511) psmd4b (ENSOKIG00005012420) PIP5K1A (ENSOKIG00005012366) ENSOKIG00005012348 Coho salmon MODERN SPECIES 4 ENSOKIG00005043311 ENSOKIG00005043323 ENSOKIG00005043337 s100w (ENSOKIG00005043354) BOK (ENSOKIG00005043370) ENSOKIG00005043403 ENSOKIG00005043448 krtcap2 (ENSOKIG00005043501) ENSOKIG00005043546 ENSOKIG00005043577 ENSOKIG00005043583 flad1 (ENSOKIG00005043618) SHC1 (ENSOKIG00005043874) lenep (ENSOKIG00005044137) pbxip1b (ENSOKIG00005044152) ENSOKIG00005044170 #22 ENSOKIG00005044183 s100t (ENSOKIG00005044190) CHRNB2 (ENSOKIG00005044209) ENSOKIG00005044220 ENSOKIG00005044228 ENSOKIG00005010954 tuft1a (ENSOKIG00005010976) #34 C1orf43 (ENSOKIG00005011001) ENSOKIG00005011172 aqp10a (ENSOKIG00005011184) ENSOKIG00005011260 ENSOKIG00005012782 ENSOKIG00005012809 znf687a (ENSOKIG00005012846) psmd4b (ENSOKIG00005012883) Chinook salmon MODERN SPECIES 15 ENSOTSG00005013442 ENSOTSG00005013446 aste1a (ENSOTSG00005011437) ATP2C1 (ENSOTSG00005011446) ENSOTSG00005012111 ENSOTSG00005012112 ENSOTSG00005012113 ENSOTSG00005012114 ENSOTSG00005012115 flad1 (ENSOTSG00005012116) SHC1 (ENSOTSG00005012138) lenep (ENSOTSG00005012139) ENSOTSG00005012142 s100a11 (ENSOTSG00005012143) #22 ENSOTSG00005012144 lenep (ENSOTSG00005012146) SHC1 (ENSOTSG00005012147) flad1 (ENSOTSG00005012159) ENSOTSG00005012171 ENSOTSG00005012174 ENSOTSG00005013178 cmtm7 (ENSOTSG00005013180) DYNC1LI1 (ENSOTSG00005013192) ENSOTSG00005013214 ENSOTSG00005014827 ino80c (ENSOTSG00005014828) gem (ENSOTSG00005014829) ENSOTSG00005014830 pdp1 (ENSOTSG00005014832) Salmo ANCESTRAL SPECIES 128 ENSGT00940000160040.A.c ENSGT00990000204073.c.b.a.b ENSGT00990000204073.c.a.a ENSGT00990000204073.c.b.a.a ENSGT00390000007266.p ENSGT00950000182870.a.a.b.q.a.a ENSGT00390000002996 ENSGT00730000111747.a.d ENSGT00940000154172.b.a #22 ENSGT00940000171931.d.b ENSGT00940000165956.f ENSGT00940000158417.b.h ENSGT00940000159107.j.d ENSGT00940000154489.B.b ENSGT00950000183065.B.e.b.b #34 ENSGT00510000047366.a.a ENSGT00950000183065.B.e.a #34 ENSGT00510000047366.a.b ENSGT00940000156178.B ENSGT00940000164368.B.i.a ENSGT01060000249872.a ENSGT00940000164368.B.i.b ENSGT00940000165692.b.b ENSGT00940000165521.b.l River trout DUPLICATION River trout MODERN SPECIES 30 ENSSTUG00000037830 rab13 (ENSSTUG00000037804) ENSSTUG00000048269 ENSSTUG00000048256 ENSSTUG00000048241 ENSSTUG00000048226 ENSSTUG00000048222 adar (ENSSTUG00000048095) ENSSTUG00000048071 ENSSTUG00000048068 ENSSTUG00000048065 flad1 (ENSSTUG00000048012) SHC1 (ENSSTUG00000047878) lenep (ENSSTUG00000047861) pbxip1b (ENSSTUG00000047849) s100a11 (ENSSTUG00000047843) #22 ENSSTUG00000047834 ENSSTUG00000047828 ENSSTUG00000047817 tuft1a (ENSSTUG00000047801) #34 C1orf43 (ENSSTUG00000047794) ENSSTUG00000047785 aqp10a (ENSSTUG00000047784) ENSSTUG00000047776 ENSSTUG00000047457 ENSSTUG00000047409 ENSSTUG00000047401 znf687a (ENSSTUG00000047399) psmd4b (ENSSTUG00000047294) pip5k1ab (ENSSTUG00000047274) ENSSTUG00000047261 River trout MODERN SPECIES 22 ENSSTUG00000012855 macc1 (ENSSTUG00000027819) ENSSTUG00000027827 ENSSTUG00000027834 hdac9b (ENSSTUG00000027839) ahr1a (ENSSTUG00000027876) ENSSTUG00000027938 ENSSTUG00000028516 ENSSTUG00000028529 ENSSTUG00000028999 flad1 (ENSSTUG00000029011) SHC1 (ENSSTUG00000029117) lenep (ENSSTUG00000029443) ENSSTUG00000029448 ENSSTUG00000029468 s100a11 (ENSSTUG00000029505) #22 ENSSTUG00000029509 ENSSTUG00000029525 ENSSTUG00000029541 tuft1a (ENSSTUG00000029570) #34 C1orf43 (ENSSTUG00000029584) ENSSTUG00000029601 ENSSTUG00000029606 aqp10a (ENSSTUG00000029620) ENSSTUG00000029690 ENSSTUG00000029697 ENSSTUG00000029723 znf687a (ENSSTUG00000029760) psmd4b (ENSSTUG00000029793) pip5k1ab (ENSSTUG00000030359) ENSSTUG00000030396 Protacanthopterygii ANCESTRAL SPECIES 119 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00390000000920.j ENSGT00440000034367 ENSGT00940000165795 ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.b.b #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00510000047366.b ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00530000064050.a ENSGT00940000154703.i ENSGT00940000154743.A.a.b ENSGT00390000010641.i.b Salmoninae ANCESTRAL SPECIES 1047 ENSGT00730000111747.b.f ENSGT00940000154172.b.b #22 ENSGT00940000168219.b ENSGT00940000166691.f ENSGT00530000063948.a.d Salmoninae_a ANCESTRAL SPECIES 139 ENSGT00730000111747.b.f ENSGT00940000154172.b.b #22 ENSGT00940000168219.b ENSGT00940000166691.f ENSGT00530000063948.a.d ENSGT00390000003453.b.b.d ENSGT00940000164368.A ENSGT00940000156524.a.f ENSGT00530000064050.a.h ENSGT00950000183155.a.b.a.a.b.c.a.a ENSGT00950000183155.a.b.a.a.b.c.b ENSGT00950000183155.a.b.a.b.c.b ENSGT00940000166158.a.a.a ENSGT00940000163756.c.a.b ENSGT00940000162367.f.hc ENSGT00950000182929.B.b.a ENSGT00940000165835.b.f Oncorhynchus ANCESTRAL SPECIES 40 ENSGT00950000182891.b.b.a ENSGT00950000182904.a.a.a.b.d ENSGT00940000164921.b.c ENSGT00950000183212.C.c.a.d #33 ENSGT00940000165956.f ENSGT00940000165795.f.b ENSGT00970000197205.C ENSGT00970000197205.E ENSGT00970000197205.A ENSGT00940000158021.c.b ENSGT00390000008892 ENSGT00940000159919.b.d ENSGT00940000166681.i.b ENSGT00950000182971.B.b.v ENSGT00730000111747.b.f ENSGT00940000154172.b.b #22 ENSGT00940000168219.b ENSGT00940000166691.f ENSGT00530000063948.a.d ENSGT00390000003453.b.b.d ENSGT00940000164368.A ENSGT00940000156524.a.f ENSGT00530000064050.a.h ENSGT00950000183155.a.b.a.a.b.c.a.a ENSGT00950000183155.a.b.a.a.b.c.b ENSGT00940000166158.a.a.a ENSGT00940000163756.c.a.b ENSGT00940000162367.f.hc ENSGT00950000182929.B.b.a ENSGT00940000165835.b.f ENSGT00730000111056.h.e Oncorhynchus_a ANCESTRAL SPECIES 96 ENSGT00940000164921.b.c ENSGT00950000183212.C.c.a.d #33 ENSGT00940000165956.f ENSGT00940000165795.f.b ENSGT00970000197205.C ENSGT00970000197205.E ENSGT00970000197205.A ENSGT00940000158021.c.b ENSGT00390000008892 ENSGT00940000159919.b.d ENSGT00940000166681.i.b ENSGT00940000166681.j ENSGT00950000182971.B.b.w.b ENSGT00950000182971.B.b.v ENSGT00730000111747.b.f ENSGT00940000154172.b.b #22 ENSGT00940000168219.b ENSGT00940000166691.f ENSGT00530000063948.a.d ENSGT00390000003453.b.b.d ENSGT00940000164368.A ENSGT00940000156524.a.f ENSGT00530000064050.a.h ENSGT00950000183155.a.b.a.a.b.c.a.a ENSGT00950000183155.a.b.a.a.b.c.b ENSGT00940000166158.a.a.a ENSGT00940000163756.c.a.b ENSGT00940000162287.D ENSGT00950000182929.B.b.a ENSGT00940000165835.b.f ENSGT00730000111056.h.e Coho salmon MODERN SPECIES 5 ENSOKIG00005026448 chrna11 (ENSOKIG00005026485) snx27a (ENSOKIG00005026544) #33 ENSOKIG00005026985 s100a10a (ENSOKIG00005027005) ENSOKIG00005027021 ENSOKIG00005027034 ENSOKIG00005027057 trim46b (ENSOKIG00005027102) dpm3 (ENSOKIG00005027324) efna1a (ENSOKIG00005027330) ENSOKIG00005027348 ENSOKIG00005027355 CKS1B (ENSOKIG00005027388) ENSOKIG00005027447 ENSOKIG00005027427 #22 s100u (ENSOKIG00005027465) ENSOKIG00005027478 s100s (ENSOKIG00005027487) pygo2 (ENSOKIG00005027555) ubap2l (ENSOKIG00005027591) aqp10b (ENSOKIG00005027713) znf687b (ENSOKIG00005027729) PSMD4 (ENSOKIG00005027823) ENSOKIG00005028158 ENSOKIG00005028173 ENSOKIG00005028182 ENSOKIG00005028198 ENSOKIG00005028203 ENSOKIG00005028241 ENSOKIG00005028318 Chinook salmon MODERN SPECIES 24 ENSOTSG00005046543 ENSOTSG00005046546 chrna11 (ENSOTSG00005046548) snx27a (ENSOTSG00005046549) #33 ENSOTSG00005046551 s100a10a (ENSOTSG00005046553) ENSOTSG00005046555 ENSOTSG00005046556 trim46b (ENSOTSG00005046559) dpm3 (ENSOTSG00005046563) efna1a (ENSOTSG00005046565) ENSOTSG00005046566 cks1b (ENSOTSG00005046567) ENSOTSG00005046569 s100u (ENSOTSG00005046568) ENSOTSG00005002721 #22 s100s (ENSOTSG00005002945) pygo2 (ENSOTSG00005002949) ubap2l (ENSOTSG00005002969) aqp10b (ENSOTSG00005003203) znf687b (ENSOTSG00005003207) PSMD4 (ENSOTSG00005003223) ENSOTSG00005003979 ENSOTSG00005003982 ENSOTSG00005003986 ENSOTSG00005003999 ENSOTSG00005004003 ENSOTSG00005004011 lipea (ENSOTSG00005004221) ENSOTSG00005004222 SLC9A3 (ENSOTSG00005004232) Rainbow trout MODERN SPECIES 24 ENSOMYG00000004382 ENSOMYG00000004215 chrna11 (ENSOMYG00000011456) snx27a (ENSOMYG00000005256) #33 ENSOMYG00000074965 s100a10a (ENSOMYG00000000673) ENSOMYG00000034864 ENSOMYG00000034856 ENSOMYG00000059255 trim46b (ENSOMYG00000005457) dpm3 (ENSOMYG00000070307) efna1a (ENSOMYG00000038281) ENSOMYG00000041980 ENSOMYG00000005653 ENSOMYG00000008450 ENSOMYG00000005896 #22 s100u (ENSOMYG00000023035) s100s (ENSOMYG00000063581) ENSOMYG00000054452 pygo2 (ENSOMYG00000005983) ENSOMYG00000049469 ubap2l (ENSOMYG00000006069) aqp10b (ENSOMYG00000007281) ENSOMYG00000070635 znf687b (ENSOMYG00000077357) ENSOMYG00000009256 ENSOMYG00000050498 ENSOMYG00000041332 ENSOMYG00000056714 ENSOMYG00000049567 ENSOMYG00000048099 Salmo ANCESTRAL SPECIES 125 ENSGT00940000154172.b.b #22 ENSGT00940000168219.b ENSGT00730000111747.b.f ENSGT00940000171931.c ENSGT00940000166691.f ENSGT00530000063948.a.d ENSGT00390000003453.b.b.d ENSGT00940000164368.A ENSGT00940000156524.a.f ENSGT00530000064050.a.h ENSGT00950000183155.a.b.a.a.b.c.a.a ENSGT00940000166158.a.a.a ENSGT00940000163756.c.a.b ENSGT00940000162367.f.hc ENSGT00950000182929.B.b.a ENSGT00940000165835.b.f River trout MODERN SPECIES 29 chrna11 (ENSSTUG00000036838) snx27a (ENSSTUG00000036928) #33 ENSSTUG00000038439 ENSSTUG00000038449 s100a10a (ENSSTUG00000038454) ENSSTUG00000038461 ENSSTUG00000038468 ENSSTUG00000038480 trim46b (ENSSTUG00000038500) dpm3 (ENSSTUG00000038600) efna1a (ENSSTUG00000038605) ENSSTUG00000038618 ENSSTUG00000038626 cks1b (ENSSTUG00000038646) ENSSTUG00000038670 ENSSTUG00000038660 #22 ENSSTUG00000038675 s100u (ENSSTUG00000034468) s100s (ENSSTUG00000034483) ENSSTUG00000034493 pygo2 (ENSSTUG00000034516) ubap2l (ENSSTUG00000034545) aqp10b (ENSSTUG00000034698) znf687b (ENSSTUG00000034715) PSMD4 (ENSSTUG00000034773) ENSSTUG00000034979 ENSSTUG00000034993 ENSSTUG00000035080 ENSSTUG00000035099 ENSSTUG00000035107 ENSSTUG00000035131 Huchen MODERN SPECIES 72 dpm3 (ENSHHUG00000035535) efna1a (ENSHHUG00000035541) ENSHHUG00000035545 cks1b (ENSHHUG00000035565) ENSHHUG00000035572 s100u (ENSHHUG00000035567) ENSHHUG00000035580 #22 s100s (ENSHHUG00000035583) pygo2 (ENSHHUG00000035595) ENSHHUG00000035601 ENSHHUG00000035616 ubap2l (ENSHHUG00000035629) PSMD4 (ENSHHUG00000035707) znf687b (ENSHHUG00000035721) ENSHHUG00000035726 ENSHHUG00000035729 ENSHHUG00000035738 ENSHHUG00000035740 ENSHHUG00000035747 ndufv1 (ENSHHUG00000035750) ENSHHUG00000035756 ENSHHUG00000035761 Northern pike MODERN SPECIES 9 ash1l (ENSELUG00000007838) ENSELUG00000007883 scamp3 (ENSELUG00000007922) RPS27 (ENSELUG00000007964) ENSELUG00000008074 chrna11 (ENSELUG00000008156) snx27a (ENSELUG00000008184) #33 ENSELUG00000008197 s100a10a (ENSELUG00000029139) trim46b (ENSELUG00000008327) dpm3 (ENSELUG00000001608) efna1a (ENSELUG00000033446) ENSELUG00000001706 cks1b (ENSELUG00000008403) ENSELUG00000008428 s100a11 (ENSELUG00000008472) #22 s100u (ENSELUG00000008487) s100s (ENSELUG00000030277) ENSELUG00000008572 pygo2 (ENSELUG00000008606) cgnb (ENSELUG00000008683) ENSELUG00000008723 #34 C1orf43 (ENSELUG00000008771) ubap2l (ENSELUG00000008908) hax1 (ENSELUG00000000338) aqp10b (ENSELUG00000008962) znf687b (ENSELUG00000008981) ENSELUG00000009051 PIP5K1A (ENSELUG00000009097) ENSELUG00000028339 ENSELUG00000028553 Otomorpha ANCESTRAL SPECIES 6 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.b.a ENSGT00950000182891.b.b.b.b.a ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00940000165795 ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00390000010118.c.b ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.b #22 ENSGT00940000171931 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000156524.a ENSGT00940000156178.B ENSGT00940000164368.B ENSGT00940000164368.A ENSGT00940000165692 ENSGT00940000165521.b Clupeiformes ANCESTRAL SPECIES 53 ENSGT00940000157203.d ENSGT00940000156698.c ENSGT00440000034367 ENSGT00950000182891.b.b.b.a ENSGT00950000182891.b.b.b.b.a ENSGT00940000164921.b ENSGT00950000183212.C.c.a #33 ENSGT00940000162189 ENSGT00940000158021.c ENSGT00390000008892 ENSGT00940000159919.b ENSGT00940000166681 ENSGT00390000010118.c.b ENSGT00950000182971.B.b ENSGT00730000111747.b ENSGT00940000154172.b #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00940000159107.i ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a Atlantic herring MODERN SPECIES 10 mrps21 (ENSCHAG00000012972) crabp2b (ENSCHAG00000012995) scamp3 (ENSCHAG00000013007) ENSCHAG00000013044 lrrc71 (ENSCHAG00000014195) rps27.1 (ENSCHAG00000014262) chrna11 (ENSCHAG00000014329) snx27a (ENSCHAG00000014659) #33 s100a10b (ENSCHAG00000014774) trim46b (ENSCHAG00000014786) dpm3 (ENSCHAG00000014792) efna1a (ENSCHAG00000014797) ENSCHAG00000014804 si:dkey-266f7.9 (ENSCHAG00000014808) ENSCHAG00000014814 s100a11 (ENSCHAG00000014822) #22 s100u (ENSCHAG00000014831) s100s (ENSCHAG00000014838) ENSCHAG00000014859 pygo2 (ENSCHAG00000014867) cgnb (ENSCHAG00000014880) ENSCHAG00000014919 #34 ubap2l (ENSCHAG00000014941) hax1 (ENSCHAG00000015070) aqp10b (ENSCHAG00000015084) znf687b (ENSCHAG00000015092) thbs3b (ENSCHAG00000015144) mtx1b (ENSCHAG00000016262) txnipa (ENSCHAG00000016348) ENSCHAG00000016377 polr3gla (ENSCHAG00000016381) Denticle herring MODERN SPECIES 12 scamp3 (ENSDCDG00000027813) ENSDCDG00000027810 ash1l (ENSDCDG00000026916) lrrc71 (ENSDCDG00000026899) rps27.1 (ENSDCDG00000026898) chrna11 (ENSDCDG00000026894) snx27a (ENSDCDG00000026420) #33 s100a10b (ENSDCDG00000026404) trim46b (ENSDCDG00000026385) dpm3 (ENSDCDG00000026381) efna1a (ENSDCDG00000026379) ENSDCDG00000026377 si:dkey-266f7.9 (ENSDCDG00000026373) cks1b (ENSDCDG00000026369) ENSDCDG00000026366 s100a11 (ENSDCDG00000026364) #22 s100u (ENSDCDG00000026362) s100s (ENSDCDG00000026359) pygo2 (ENSDCDG00000026356) cgnb (ENSDCDG00000026348) ENSDCDG00000026346 #34 ubap2l (ENSDCDG00000026329) hax1 (ENSDCDG00000026320) znf687b (ENSDCDG00000026318) si:ch211-81a5.8 (ENSDCDG00000026315) clk2a (ENSDCDG00000024158) ENSDCDG00000024146 setdb1a (ENSDCDG00000024143) cdc20 (ENSDCDG00000024140) tekt2 (ENSDCDG00000024138) si:dkey-211g8.6 (ENSDCDG00000024134) Otophysi ANCESTRAL SPECIES 64 ENSGT00730000111747.b ENSGT00940000154172.b #22 ENSGT00940000171931 ENSGT00940000168219 ENSGT00940000166691 ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00950000182971.B.b ENSGT00390000010118.c.b ENSGT00940000166681 ENSGT00940000159919.b ENSGT00390000008892 Cyprinoidei ANCESTRAL SPECIES 33 ENSGT00390000007227.a ENSGT00940000158230.b.b ENSGT00870000136537 ENSGT00940000167560 ENSGT00390000009895 ENSGT00390000016607.b ENSGT01050000244970.a ENSGT00390000014542 ENSGT00390000009042 ENSGT00390000008281 #30 ENSGT00940000167151 ENSGT00730000111747.b ENSGT00940000154172.b #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00950000182971.B.b ENSGT01060000249203.A ENSGT00390000010118.c.b ENSGT00940000166681 ENSGT00940000159919.b ENSGT00390000008892 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 185 ENSGT00950000183186.B.b.d.a.a ENSGT00390000010209.c.a.d ENSGT00940000155187.B.p.a ENSGT00390000007227.a.h ENSGT00940000158230.b.b.f ENSGT00870000136537.d ENSGT00940000167560.l ENSGT00390000009895.a.b ENSGT00390000016607.b.q ENSGT01050000244970.a.b ENSGT00390000014542.b ENSGT00390000009042.f ENSGT00390000005869.a.a.a ENSGT00730000111747.b.d ENSGT00940000154172.b.c #22 ENSGT00940000171931 ENSGT00940000168838 ENSGT00940000154489.B.a.e ENSGT00950000183065.B.f.a #34 ENSGT00390000003453.b.b.b ENSGT00390000018324.b ENSGT00390000018324.a ENSGT00940000164368.A ENSGT00940000156524.a.d ENSGT00950000182971.B.b ENSGT00390000010118.c.b.c ENSGT00940000166681.b ENSGT00940000159919.b.a.a ENSGT00390000008892.b ENSGT00390000007091.ab.a.a.a.a Goldfish MODERN SPECIES 38 ENSCARG00000024291 CLEC3B (ENSCARG00000024306) ENSCARG00000024314 oxr1b (ENSCARG00000024372) naxe (ENSCARG00000025413) rab25a (ENSCARG00000025457) sf3b4 (ENSCARG00000025469) gabpb2a (ENSCARG00000025481) mllt11 (ENSCARG00000025492) mindy1 (ENSCARG00000025495) ENSCARG00000025505 mrpl24 (ENSCARG00000025520) prcc (ENSCARG00000019916) LIX1L (ENSCARG00000019920) ENSCARG00000019933 s100a11 (ENSCARG00000019949) #22 s100u (ENSCARG00000019953) s100s (ENSCARG00000019955) pygo2 (ENSCARG00000019960) cgnb (ENSCARG00000019963) ENSCARG00000019974 #34 ubap2l (ENSCARG00000020007) hax1 (ENSCARG00000020136) znf687b (ENSCARG00000020179) cks1b (ENSCARG00000020192) ENSCARG00000020229 si:dkey-266f7.9 (ENSCARG00000020256) ENSCARG00000020259 ENSCARG00000020265 efna1a (ENSCARG00000020272) dpm3 (ENSCARG00000020285) Cyprininae_a ANCESTRAL SPECIES 52 ENSGT00950000183186.B.b.d.b ENSGT00950000183186.B.b.d.a.a ENSGT00390000010209.c.a.d ENSGT00940000155187.B.p.a ENSGT00390000007227.a.h ENSGT00940000158230.b.b.f ENSGT00870000136537.d ENSGT00940000167560.l ENSGT00390000009895.a.b ENSGT00390000016607.b.q ENSGT01050000244970.a.b ENSGT00390000014542.b ENSGT00390000009042.f ENSGT00390000005869.a.a.a ENSGT00730000111747.b.d ENSGT00940000154172.b.c #22 ENSGT00940000171931 ENSGT00940000166691.b ENSGT00940000168838 ENSGT00940000154489.B.a.e ENSGT00950000183065.B.f.a #34 ENSGT00390000003453.b.b.b ENSGT00390000018324.b ENSGT00390000018324.a ENSGT00940000164368.A ENSGT00940000156524.a.d ENSGT00950000182971.B.b.s ENSGT00390000010118.c.b.c ENSGT00940000166681.b ENSGT00940000159919.b.a.a ENSGT00390000008892.b Common carp reference MODERN SPECIES 31 exosc7 (ENSCCRG00000003338) ENSCCRG00000078873 ENSCCRG00000004273 oxr1b (ENSCCRG00000010834) naxe (ENSCCRG00000010831) rab25a (ENSCCRG00000057580) sf3b4 (ENSCCRG00000010818) gabpb2a (ENSCCRG00000010806) mllt11 (ENSCCRG00000079312) mindy1 (ENSCCRG00000071056) ENSCCRG00000077954 mrpl24 (ENSCCRG00000010053) prcc (ENSCCRG00000072373) ENSCCRG00000010026 ENSCCRG00000066755 s100a11 (ENSCCRG00000010018) #22 ENSCCRG00000070538 s100s (ENSCCRG00000055021) ENSCCRG00000072601 cgnb (ENSCCRG00000070443) ENSCCRG00000069050 #34 ENSCCRG00000067698 ubap2l (ENSCCRG00000007971) hax1 (ENSCCRG00000007950) znf687b (ENSCCRG00000007948) cks1b (ENSCCRG00000063929) ENSCCRG00000009876 ENSCCRG00000066586 ENSCCRG00000066838 si:dkey-266f7.9 (ENSCCRG00000067905) ENSCCRG00000059719 Golden-line barbel MODERN SPECIES 693 CLEC3B (ENSSGRG00000007686) CLEC3B (ENSSGRG00000007689) ENSSGRG00000007690 ENSSGRG00000007693 oxr1b (ENSSGRG00000007695) naxe (ENSSGRG00000007696) rab25a (ENSSGRG00000007697) sf3b4 (ENSSGRG00000007700) gabpb2a (ENSSGRG00000007703) mindy1 (ENSSGRG00000007705) ENSSGRG00000007707 mrpl24 (ENSSGRG00000007712) mrpl9 (ENSSGRG00000007750) #30 LIX1L (ENSSGRG00000007754) ENSSGRG00000007760 s100a11 (ENSSGRG00000007769) #22 s100s (ENSSGRG00000007772) ENSSGRG00000007774 cgnb (ENSSGRG00000007777) Cyprininae ANCESTRAL SPECIES 143 ENSGT00940000160042.b.a.a ENSGT00390000011759.f ENSGT00940000155187.B.p.b ENSGT00390000007227.a.g ENSGT00940000158230.b.b.e ENSGT00870000136537.c ENSGT00940000167560.k ENSGT00390000009895.a.a ENSGT00390000016607.b.r ENSGT01050000244970.a.a ENSGT00390000014542.a ENSGT00390000009042.e ENSGT00390000008281 #30 ENSGT00940000167151 ENSGT00730000111747.b.c ENSGT00940000154172.b.d #22 ENSGT00940000168219 ENSGT00940000166691 ENSGT00530000063948.a ENSGT00940000154489.B.a.f ENSGT00950000183065.B.f.b #34 ENSGT00390000003453.b.b.a Goldfish MODERN SPECIES 10 RECQL4 (ENSCARG00000014374) ENSCARG00000014541 oxr1b (ENSCARG00000014610) naxe (ENSCARG00000015901) rab25a (ENSCARG00000015911) sf3b4 (ENSCARG00000015931) gabpb2a (ENSCARG00000015943) mllt11 (ENSCARG00000015955) mindy1 (ENSCARG00000015960) ENSCARG00000015978 mrpl24 (ENSCARG00000015986) prcc (ENSCARG00000016005) mrpl9 (ENSCARG00000016012) #30 ENSCARG00000016034 LIX1L (ENSCARG00000016055) s100a11 (ENSCARG00000016062) #22 s100u (ENSCARG00000016080) s100s (ENSCARG00000016101) pygo2 (ENSCARG00000016116) cgnb (ENSCARG00000016134) ENSCARG00000016197 #34 ubap2l (ENSCARG00000016225) hax1 (ENSCARG00000016365) aqp10b (ENSCARG00000016382) znf687b (ENSCARG00000016411) cks1b (ENSCARG00000016433) ENSCARG00000016452 si:dkey-266f7.5 (ENSCARG00000016461) ENSCARG00000016478 ENSCARG00000016495 efna1a (ENSCARG00000016502) Cyprininae_a ANCESTRAL SPECIES 43 ENSGT00940000160387 ENSGT00390000011759.f ENSGT00940000155187.B.p.b ENSGT00390000007227.a.g ENSGT00940000158230.b.b.e ENSGT00870000136537.c ENSGT00940000167560.k ENSGT00390000009895.a.a ENSGT00390000016607.b.r ENSGT01050000244970.a.a ENSGT00390000014542.a ENSGT00390000009042.e ENSGT00390000008281 #30 ENSGT00940000167151 ENSGT00730000111747.b.c ENSGT00940000154172.b.d #22 ENSGT00940000168219 ENSGT00940000166691.a ENSGT00530000063948.a ENSGT00940000154489.B.a.f ENSGT00950000183065.B.f.b #34 ENSGT00390000003453.b.b.a Common carp reference MODERN SPECIES 12 ENSCCRG00000010905 ENSCCRG00000072842 ENSCCRG00000004284 ENSCCRG00000032236 ENSCCRG00000049553 sf3b4 (ENSCCRG00000067529) gabpb2a (ENSCCRG00000068978) mllt11 (ENSCCRG00000076923) mindy1 (ENSCCRG00000077567) ENSCCRG00000010061 mrpl24 (ENSCCRG00000010166) prcc (ENSCCRG00000010048) mrpl9 (ENSCCRG00000010154) #30 ENSCCRG00000068558 ENSCCRG00000006090 s100a11 (ENSCCRG00000006085) #22 ENSCCRG00000006063 s100s (ENSCCRG00000054767) ENSCCRG00000066405 cgnb (ENSCCRG00000079708) ENSCCRG00000007940 #34 ubap2l (ENSCCRG00000007789) hax1 (ENSCCRG00000051803) aqp10b (ENSCCRG00000051805) znf687b (ENSCCRG00000053812) cks1b (ENSCCRG00000051810) ENSCCRG00000051815 ENSCCRG00000081131 si:dkey-266f7.9 (ENSCCRG00000081891) ENSCCRG00000077525 dpm3 (ENSCCRG00000065825) Golden-line barbel MODERN SPECIES 115 ENSSGRG00000001781 ENSSGRG00000001606 ENSSGRG00000001603 oxr1b (ENSSGRG00000001402) naxe (ENSSGRG00000001296) rab25a (ENSSGRG00000001211) sf3b4 (ENSSGRG00000001194) gabpb2a (ENSSGRG00000001157) mllt11 (ENSSGRG00000054841) mindy1 (ENSSGRG00000054840) ENSSGRG00000054839 prcc (ENSSGRG00000054838) mrpl9 (ENSSGRG00000054837) #30 lix1l (ENSSGRG00000054836) ENSSGRG00000054833 s100a11 (ENSSGRG00000054832) #22 s100u (ENSSGRG00000054831) s100s (ENSSGRG00000054829) pygo2 (ENSSGRG00000054827) cgnb (ENSSGRG00000054825) ENSSGRG00000054822 #34 ubap2l (ENSSGRG00000054604) hax1 (ENSSGRG00000054561) hax1 (ENSSGRG00000054559) aqp10b (ENSSGRG00000054558) znf687b (ENSSGRG00000054556) cks1b (ENSSGRG00000054553) si:dkey-266f7.9 (ENSSGRG00000054548) ENSSGRG00000054545 efna1a (ENSSGRG00000054544) dpm3 (ENSSGRG00000054543) Zebrafish MODERN SPECIES 10 ccdc127b (ENSDARG00000008946) SQLE (ENSDARG00000063319) oxr1b (ENSDARG00000063310) naxe (ENSDARG00000058806) rab25a (ENSDARG00000058800) sf3b4 (ENSDARG00000018574) gabpb2a (ENSDARG00000007943) mllt11 (ENSDARG00000071026) mindy1 (ENSDARG00000004866) ENSDARG00000063258 mrpl24 (ENSDARG00000019222) prcc (ENSDARG00000063252) mrpl9 (ENSDARG00000063249) #30 lix1l (ENSDARG00000063244) ENSDARG00000071015 s100a11 (ENSDARG00000093628) #22 s100u (ENSDARG00000071014) s100s (ENSDARG00000036773) pygo2 (ENSDARG00000036772) cgnb (ENSDARG00000058690) ENSDARG00000036767 ENSDARG00000058685 tuft1b (ENSDARG00000071010) ubap2l (ENSDARG00000063219) hax1 (ENSDARG00000036764) aqp10b (ENSDARG00000058678) znf687b (ENSDARG00000019299) cks1b (ENSDARG00000007971) ENSDARG00000071001 ENSDARG00000092878 nuggc.2 (ENSDARG00000091951) Characiphysae ANCESTRAL SPECIES 75 ENSGT00730000111747.b ENSGT00940000154172.b #22 ENSGT00940000171931 ENSGT00940000168219 ENSGT00940000166691 ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00950000182971.B.b ENSGT00390000010118.c.b ENSGT00940000166681 ENSGT00940000159919.b ENSGT00390000008892 Channel catfish MODERN SPECIES 3 dpm3 (ENSIPUG00000007763) trim46b (ENSIPUG00000007689) s100a10a (ENSIPUG00000007659) Snx27 (ENSIPUG00000007587) #33 chrna11 (ENSIPUG00000007547) rps27.1 (ENSIPUG00000007437) morn3 (ENSIPUG00000007423) ENSIPUG00000007408 Cks1b (ENSIPUG00000007393) ZNF687 (ENSIPUG00000007355) aqp10b (ENSIPUG00000007332) hax1 (ENSIPUG00000007302) ubap2l (ENSIPUG00000007128) ENSIPUG00000007044 #34 PBXIP1 (ENSIPUG00000006990) s100a11 (ENSIPUG00000006945) #22 ENSIPUG00000006924 s100s (ENSIPUG00000006911) pygo2 (ENSIPUG00000006900) cgnb (ENSIPUG00000006734) nudc (ENSIPUG00000006691) tbxta (ENSIPUG00000006660) ARID1A (ENSIPUG00000006578) kat2b (ENSIPUG00000006521) ENSIPUG00000006495 ENSIPUG00000006482 tbc1d5 (ENSIPUG00000006394) dazl (ENSIPUG00000006376) ENSIPUG00000006330 ENSIPUG00000006286 osbpl3a (ENSIPUG00000006191) Characiphysae_b ANCESTRAL SPECIES 61 ENSGT00390000015391 ENSGT00940000165364.a.b ENSGT00940000165134.a.a ENSGT00940000160115.a.b ENSGT00940000157292.fc.a ENSGT00940000159960.c ENSGT00520000055635.c.b.b.a.b ENSGT00940000158852.g.b ENSGT01100000263479.I.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b ENSGT00940000155088.b.a.a.c ENSGT00730000111747.b ENSGT00940000154172.b #22 ENSGT00940000171931 ENSGT00940000168219 ENSGT00940000166691 ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00950000182971.B.b ENSGT00390000010118.c.b ENSGT00940000166681 ENSGT00940000159919.b ENSGT00390000008892 Electric eel MODERN SPECIES 59 zgc:174904 (ENSEEEG00000001332) gnb3b (ENSEEEG00000001333) tpi1a (ENSEEEG00000001334) eno2 (ENSEEEG00000001335) cdc42l (ENSEEEG00000001338) chd4a (ENSEEEG00000001463) ENSEEEG00000006510 ENSEEEG00000006512 s100a11 (ENSEEEG00000006516) #22 s100u (ENSEEEG00000006518) s100s (ENSEEEG00000006520) pygo2 (ENSEEEG00000006522) cgnb (ENSEEEG00000006524) ENSEEEG00000006525 #34 ubap2l (ENSEEEG00000006538) hax1 (ENSEEEG00000006556) ENSEEEG00000006561 aqp10b (ENSEEEG00000006631) znf687b (ENSEEEG00000006632) cks1b (ENSEEEG00000006634) ENSEEEG00000006637 si:dkey-266f7.9 (ENSEEEG00000006638) ENSEEEG00000006640 efna1a (ENSEEEG00000006642) Characoidei ANCESTRAL SPECIES 82 ENSGT00940000165134.a.a ENSGT00940000160115.a.b ENSGT00940000157292.fc.a ENSGT00940000159960.c ENSGT00520000055635.c.b.b.a.b ENSGT00940000166708 ENSGT00940000158852.g.b ENSGT01100000263479.I.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b ENSGT00940000153675.a.a.a.a.b ENSGT00940000155088.b.a.a.c ENSGT00730000111747.b ENSGT00940000154172.b #22 ENSGT00940000171931 ENSGT00940000166691 ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f #34 ENSGT00390000003453.b.b ENSGT00390000018324 ENSGT00940000164368.A ENSGT00940000156524.a ENSGT00950000182971.B.b ENSGT01060000249203.A ENSGT00990000204073.a ENSGT00390000010118.c.b ENSGT00940000166681 ENSGT00940000159919.b Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 141 POU2F2 (ENSPNAG00000010198) erf (ENSPNAG00000010147) ENSPNAG00000010103 GSK3A (ENSPNAG00000010051) ENSPNAG00000010010 GRIK5 (ENSPNAG00000009981) ENSPNAG00000009848 ENSPNAG00000009833 zgc:174904 (ENSPNAG00000009821) gnb3b (ENSPNAG00000001335) tpi1a (ENSPNAG00000009778) eno2 (ENSPNAG00000009740) ENSPNAG00000009682 chd4a (ENSPNAG00000009629) ENSPNAG00000009488 ENSPNAG00000009419 #22 ENSPNAG00000009373 s100s (ENSPNAG00000009356) pygo2 (ENSPNAG00000009346) cgnb (ENSPNAG00000009328) ENSPNAG00000009288 #34 ubap2l (ENSPNAG00000009258) hax1 (ENSPNAG00000009172) aqp10b (ENSPNAG00000006412) znf687b (ENSPNAG00000009131) cks1b (ENSPNAG00000009119) ENSPNAG00000009113 Red-bellied piranha MODERN SPECIES 437 SHC1 (ENSPNAG00000011227) lenep (ENSPNAG00000001626) pbxip1b (ENSPNAG00000011260) ENSPNAG00000001645 ENSPNAG00000006415 ENSPNAG00000011296 s100a11 (ENSPNAG00000011305) #22 si:ch211-105c13.3 (ENSPNAG00000006990) s100t (ENSPNAG00000011319) CHRNB2 (ENSPNAG00000011344) AFDN (ENSPNAG00000011604) unc93a (ENSPNAG00000001845) ttll2 (ENSPNAG00000011654) ENSPNAG00000001861 ENSPNAG00000001863 slc22a2 (ENSPNAG00000011765) plg (ENSPNAG00000001951) slc22a2 (ENSPNAG00000011865) igf2r (ENSPNAG00000011983) tdrd15 (ENSPNAG00000012015) rfx6 (ENSPNAG00000012068) Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 79 ENSAMXG00000020038 zgc:174904 (ENSAMXG00000036077) zgc:174904 (ENSAMXG00000041815) gnb3b (ENSAMXG00000041530) tpi1a (ENSAMXG00000019991) ENSAMXG00000035605 eno2 (ENSAMXG00000019987) cdc42l (ENSAMXG00000029705) chd4a (ENSAMXG00000019969) ENSAMXG00000034868 ENSAMXG00000029851 #22 ENSAMXG00000042556 s100s (ENSAMXG00000019926) ENSAMXG00000043640 cgnb (ENSAMXG00000029456) ENSAMXG00000041348 #34 ubap2l (ENSAMXG00000019853) hax1 (ENSAMXG00000019824) aqp10b (ENSAMXG00000019801) znf687b (ENSAMXG00000019781) cks1b (ENSAMXG00000030309) ENSAMXG00000019756 ENSAMXG00000041125 si:dkey-266f7.9 (ENSAMXG00000033919) ENSAMXG00000033304 Mexicana tetra MODERN SPECIES 2 icn (ENSAMXG00000029914) s100w (ENSAMXG00000035595) s100a10b (ENSAMXG00000039293) krtcap2 (ENSAMXG00000038665) TRIM46 (ENSAMXG00000043306) slc50a1 (ENSAMXG00000036886) efna1b (ENSAMXG00000032247) ENSAMXG00000032378 ENSAMXG00000029119 ENSAMXG00000032864 flad1 (ENSAMXG00000036517) SHC1 (ENSAMXG00000016334) lenep (ENSAMXG00000031639) pbxip1b (ENSAMXG00000016316) ENSAMXG00000016324 s100a11 (ENSAMXG00000035272) #22 si:ch211-105c13.3 (ENSAMXG00000040438) s100t (ENSAMXG00000040936) CHRNB2 (ENSAMXG00000016297) ENSAMXG00000016282 ENSAMXG00000029172 tuft1a (ENSAMXG00000016263) #34 ENSAMXG00000029684 zgc:123238 (ENSAMXG00000016250) aqp10a (ENSAMXG00000016242) ENSAMXG00000016234 ENSAMXG00000029667 ENSAMXG00000037802 #31 ENSAMXG00000016204 znf687a (ENSAMXG00000016184) setdb1b (ENSAMXG00000016168) Osteoglossiformes ANCESTRAL SPECIES ENSGT00950000182904.a.a.a.a.a ENSGT00940000157243 ENSGT00940000164921.a ENSGT00950000183212.C #33 ENSGT00390000000920 ENSGT00940000165795 ENSGT00390000003552 ENSGT00940000158021.a ENSGT00390000007801 ENSGT00940000159919.a ENSGT00940000161355 ENSGT00940000160040.A.b ENSGT00390000007266 ENSGT00950000182870.a.a.b ENSGT00730000111747.a ENSGT00940000154172.b #22 P. kingsleyae MODERN SPECIES 80 KCNN3 (ENSPKIG00000014466) adar (ENSPKIG00000014435) ENSPKIG00000014375 snx27b (ENSPKIG00000014279) #33 s100w (ENSPKIG00000014179) icn (ENSPKIG00000014153) s100a10b (ENSPKIG00000014135) TRIM46 (ENSPKIG00000014081) krtcap2 (ENSPKIG00000014039) slc50a1 (ENSPKIG00000014019) efna1b (ENSPKIG00000013998) efna3b (ENSPKIG00000013966) ENSPKIG00000013934 flad1 (ENSPKIG00000013919) ENSPKIG00000013873 s100a11 (ENSPKIG00000013840) #22 ENSPKIG00000013824 sim1a (ENSPKIG00000013759) ASCC3 (ENSPKIG00000013639) GRIK2 (ENSPKIG00000013540) ENSPKIG00000013489 HACE1 (ENSPKIG00000013369) lin28b (ENSPKIG00000013309) bves (ENSPKIG00000013243) popdc3 (ENSPKIG00000013198) prep (ENSPKIG00000013135) prdm1a (ENSPKIG00000013054) atg5 (ENSPKIG00000012978) ENSPKIG00000012940 ENSPKIG00000012928 hint3 (ENSPKIG00000012913) Spotted gar MODERN SPECIES 663 krtcap2 (ENSLOCG00000006824) dpm3 (ENSLOCG00000017679) efna3b (ENSLOCG00000006835) ENSLOCG00000006851 ENSLOCG00000006868 ilf2 (ENSLOCG00000006883) npr1a (ENSLOCG00000006899) ints3 (ENSLOCG00000006927) syt11b (ENSLOCG00000006943) pex11b (ENSLOCG00000006969) ENSLOCG00000006980 zgc:64022 (ENSLOCG00000007010) flad1 (ENSLOCG00000007025) pygo2 (ENSLOCG00000007047) ENSLOCG00000007064 s100a11 (ENSLOCG00000007082) #22 ENSLOCG00000007099 s100t (ENSLOCG00000007123) s100a10b (ENSLOCG00000007141) ENSLOCG00000007158 ENSLOCG00000007171 ENSLOCG00000007178 ENSLOCG00000007188 ENSLOCG00000007203 glmp (ENSLOCG00000007215) cct3 (ENSLOCG00000007229) pdia7 (ENSLOCG00000007247) gon4lb (ENSLOCG00000007268) ENSLOCG00000007284 ssr2 (ENSLOCG00000007294) ENSLOCG00000007308 Reedfish MODERN SPECIES 10 ENSECRG00000002821 nudt17 (ENSECRG00000002806) thbs3b (ENSECRG00000002802) mtx1b (ENSECRG00000002792) ENSECRG00000002788 ENSECRG00000002749 ENSECRG00000002718 snx27b (ENSECRG00000002678) #33 chrna11 (ENSECRG00000002584) lenep (ENSECRG00000002567) SHC1 (ENSECRG00000002521) cks1b (ENSECRG00000002484) flad1 (ENSECRG00000002467) pygo2 (ENSECRG00000002459) ENSECRG00000002430 s100a11 (ENSECRG00000002401) #22 ENSECRG00000002391 ENSECRG00000002383 ENSECRG00000002373 trim46b (ENSECRG00000002362) ENSECRG00000002352 ENSECRG00000002332 ubap2l (ENSECRG00000002254) ENSECRG00000002213 #34 ENSECRG00000002171 #35 ENSECRG00000002123 ENSECRG00000002077 aqp10b (ENSECRG00000001873) ATP8B2 (ENSECRG00000001706) IL6R (ENSECRG00000001666) ENSECRG00000001589