Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000154417 #21
Gnathostomata	ANCESTRAL SPECIES	933														ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417 #21
Euteleostomi	ANCESTRAL SPECIES	250			ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.A	ENSGT01050000244971.B	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00970000193437	ENSGT00940000154417 #21	ENSGT00390000012939
Sarcopterygii	ANCESTRAL SPECIES	134	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.A	ENSGT01050000244971.B	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00970000193437	ENSGT00940000154417 #21	ENSGT00390000012939
Tetrapoda	ANCESTRAL SPECIES	44		ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.B	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00970000193437	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000155096	ENSGT00940000161504	ENSGT00390000016392	ENSGT00960000190452	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461	ENSGT00600000084471
Amniota	ANCESTRAL SPECIES	21	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.B	ENSGT00970000193558	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00970000193437	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000161819	ENSGT00940000155096	ENSGT00940000161938	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000164191	ENSGT00390000006238
Mammalia	DUPLICATION
Mammalia	DUPLICATION
Mammalia	ANCESTRAL SPECIES	17	ENSGT00950000183063.d	ENSGT00940000156050	ENSGT00940000156454	ENSGT00940000155314	ENSGT00510000048936	ENSGT00940000158776	ENSGT00390000017294	ENSGT00390000001206	ENSGT00390000000911	ENSGT00940000162826	ENSGT00970000193558	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01100000264053 #19	ENSGT00940000154417.a.b #21	ENSGT00390000012939	ENSGT00940000161819	ENSGT00940000155096	ENSGT00940000161938	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000164191	ENSGT00390000006238
Theria	ANCESTRAL SPECIES	216															ENSGT01100000264053 #19	ENSGT00940000154417.a.b #21
Eutheria	ANCESTRAL SPECIES	19	ENSGT00940000153216.a.a.c.b.q.a	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01100000264053 #19	ENSGT00970000193437	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00940000162377	ENSGT00940000162746
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00970000193437	ENSGT00940000154417.a.a #25	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000153216.a.a.c.b.q.a	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000154417.a.a #25	ENSGT01080000257453	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00940000159082.a.b ##14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.a #25	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.a #25	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746	ENSGT00940000156704
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Camelidae	ANCESTRAL SPECIES	9	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000264053 #19	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746
Arabian camel	DUPLICATION
Arabian camel	MODERN SPECIES	35	ZNRF1 (ENSCDRG00005013780) #7	WDR59 (ENSCDRG00005013472) #8	FA2H (ENSCDRG00005013362) #9	MLKL (ENSCDRG00005013278) #10	RFWD3 (ENSCDRG00005013151) #11	ENSCDRG00005013138 #12	GLG1 (ENSCDRG00005012462) #13	ENSCDRG00005012399 #14	ENSCDRG00005012342 #15	ENSCDRG00005012252 #16	EXOSC6 (ENSCDRG00005012232) #17	AARS1 (ENSCDRG00005012135) #18	ENSCDRG00005012088 #19	ENSCDRG00005012047 #20	ENSCDRG00005012016 #21	DDX19B (ENSCDRG00005011756) #22	ENSCDRG00005011679 #23	ENSCDRG00005011628 #24	DDX19A (ENSCDRG00005011214) #25	ST3GAL2 (ENSCDRG00005011121) #26	FCSK (ENSCDRG00005010961) #27	COG4 (ENSCDRG00005010542) #28	SF3B3 (ENSCDRG00005010317) #29	IL34 (ENSCDRG00005010189) #30	MTSS2 (ENSCDRG00005010108) #31	ENSCDRG00005010046 #32	ENSCDRG00005010004 #33	ENSCDRG00005009859 #34	ENSCDRG00005009789 #35	HYDIN (ENSCDRG00005009322) #36	CALB2 (ENSCDRG00005009154) #37
Arabian camel	MODERN SPECIES	35	LDHD (ENSCDRG00005013842)	ZNRF1 (ENSCDRG00005013780) #7	WDR59 (ENSCDRG00005013472) #8	FA2H (ENSCDRG00005013362) #9	MLKL (ENSCDRG00005013278) #10	RFWD3 (ENSCDRG00005013151) #11	ENSCDRG00005013138 #12	GLG1 (ENSCDRG00005012462) #13	ENSCDRG00005012399 #14	ENSCDRG00005012342 #15	ENSCDRG00005012252 #16	EXOSC6 (ENSCDRG00005012232) #17	AARS1 (ENSCDRG00005012135) #18	ENSCDRG00005012088 #19	ENSCDRG00005012047 #20	ENSCDRG00005012016 #21	DDX19B (ENSCDRG00005011756) #22	ENSCDRG00005011679 #23	ENSCDRG00005011628 #24	DDX19A (ENSCDRG00005011214) #25	ST3GAL2 (ENSCDRG00005011121) #26	FCSK (ENSCDRG00005010961) #27	COG4 (ENSCDRG00005010542) #28	SF3B3 (ENSCDRG00005010317) #29	IL34 (ENSCDRG00005010189) #30	MTSS2 (ENSCDRG00005010108) #31	ENSCDRG00005010046 #32	ENSCDRG00005010004 #33	ENSCDRG00005009859 #34	ENSCDRG00005009789 #35	HYDIN (ENSCDRG00005009322) #36
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.a #25	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746	ENSGT00940000156704
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT01080000257453.m	ENSGT00940000154417.a.a #25	ENSGT01080000257453.n	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000169858	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b
Blue whale	MODERN SPECIES	10	ENSBMSG00010018982	ENSBMSG00010018927	ZFP1 (ENSBMSG00010018861)	LDHD (ENSBMSG00010018785)	ZNRF1 (ENSBMSG00010018717) #7	WDR59 (ENSBMSG00010018647) #8	FA2H (ENSBMSG00010018601) #9	RFWD3 (ENSBMSG00010018490) #11	GLG1 (ENSBMSG00010018426) #13	PDPR (ENSBMSG00010018372) #14	ENSBMSG00010018292 #16	EXOSC6 (ENSBMSG00010018270) #17	AARS1 (ENSBMSG00010018248) #18	ENSBMSG00010018210	ENSBMSG00010018149	DDX19B (ENSBMSG00010017891) #21	ST3GAL2 (ENSBMSG00010017806) #26	FCSK (ENSBMSG00010017597) #27	COG4 (ENSBMSG00010017464) #28	SF3B3 (ENSBMSG00010017379) #29	IL34 (ENSBMSG00010017294) #30	MTSS2 (ENSBMSG00010017173) #31	VAC14 (ENSBMSG00010017057) #32	ENSBMSG00010017034	ENSBMSG00010016968 #36	CMTR2 (ENSBMSG00010016953)	CALB2 (ENSBMSG00010016841) #37	TLE7 (ENSBMSG00010016787)	ZNF23 (ENSBMSG00010016757)	ENSBMSG00010016728	ENSBMSG00010016647
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000153216.a.a.c.b.q.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453.m	ENSGT00940000154417.a.a #25	ENSGT01080000257453.n.b	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000169858	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000153216.a.a.c.b.q.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453.m	ENSGT00940000154417.a.a #25	ENSGT01080000257453.n.b	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000169858	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b
Dolphin	MODERN SPECIES	1247																DDX19B (ENSTTRG00000005800) #21	DDX19A (ENSTTRG00000005817) #25	ST3GAL2 (ENSTTRG00000005824) #26	FCSK (ENSTTRG00000005826) #27	COG4 (ENSTTRG00000005847) #28	SF3B3 (ENSTTRG00000005855) #29	IL34 (ENSTTRG00000005859) #30	MTSS2 (ENSTTRG00000005862) #31	VAC14 (ENSTTRG00000005864) #32	ENSTTRG00000005865	HYDIN (ENSTTRG00000005866) #36	CMTR2 (ENSTTRG00000005867)
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000153216.a.a.c.b.q.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153771.B.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453.m	ENSGT00940000154417.a.a #25	ENSGT01080000257453.n.b	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000169858	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b
Vaquita	MODERN SPECIES	10	ENSPSNG00000019693	ENSPSNG00000019663	ZFP1 (ENSPSNG00000019541)	LDHD (ENSPSNG00000019508)	ZNRF1 (ENSPSNG00000019427) #7	WDR59 (ENSPSNG00000019333) #8	FA2H (ENSPSNG00000019281) #9	RFWD3 (ENSPSNG00000019144) #11	GLG1 (ENSPSNG00000019039) #13	PDPR (ENSPSNG00000018960) #14	ENSPSNG00000018817 #16	EXOSC6 (ENSPSNG00000018796) #17	AARS1 (ENSPSNG00000018714) #18	ENSPSNG00000018636	ENSPSNG00000018587	DDX19B (ENSPSNG00000018305) #21	ST3GAL2 (ENSPSNG00000018198) #26	FCSK (ENSPSNG00000018003) #27	COG4 (ENSPSNG00000017886) #28	SF3B3 (ENSPSNG00000017774) #29	IL34 (ENSPSNG00000017722) #30	MTSS2 (ENSPSNG00000017661) #31	VAC14 (ENSPSNG00000017405) #32	ENSPSNG00000017368	ENSPSNG00000017187 #36	CMTR2 (ENSPSNG00000017151)	CALB2 (ENSPSNG00000016955) #37	ZNF23 (ENSPSNG00000016794)	ENSPSNG00000016737	ZNF19 (ENSPSNG00000016610)	CHST4 (ENSPSNG00000016324)
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000153216.a.a.c.b.q.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153771.B.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453.m	ENSGT00940000154417.a.a #25	ENSGT01080000257453.n.b	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00390000008294.e.a	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Narwhal	MODERN SPECIES	296	ENSMMNG00015001218	ENSMMNG00015001267	ENSMMNG00015001293	ENSMMNG00015001321	ZFP1 (ENSMMNG00015001347)	LDHD (ENSMMNG00015001373)	ENSMMNG00015001402 #7	WDR59 (ENSMMNG00015001427) #8	FA2H (ENSMMNG00015001483) #9	GLG1 (ENSMMNG00015001665) #13	ENSMMNG00015001957 #14	ENSMMNG00015001989 #15	ENSMMNG00015002019 #16	EXOSC6 (ENSMMNG00015002065) #17	AARS1 (ENSMMNG00015002085) #18	DDX19B (ENSMMNG00015002151) #21	ENSMMNG00015002210	DDX19A (ENSMMNG00015002246) #25	ENSMMNG00015002313	ST3GAL2 (ENSMMNG00015002339) #26	FCSK (ENSMMNG00015002367) #27	COG4 (ENSMMNG00015002417) #28	SF3B3 (ENSMMNG00015002474) #29	IL34 (ENSMMNG00015002547) #30	MTSS2 (ENSMMNG00015002582) #31	VAC14 (ENSMMNG00015002646) #32	HYDIN (ENSMMNG00015002720) #36	ENSMMNG00015002761	CALB2 (ENSMMNG00015002778) #37	TLE7 (ENSMMNG00015002801)	ZNF23 (ENSMMNG00015002816)
Beluga whale	MODERN SPECIES	12	ENSDLEG00000002436	ENSDLEG00000002473	ENSDLEG00000002485	ENSDLEG00000002508	ZFP1 (ENSDLEG00000002523)	LDHD (ENSDLEG00000002531)	ENSDLEG00000002556 #7	WDR59 (ENSDLEG00000002568) #8	FA2H (ENSDLEG00000002631) #9	RFWD3 (ENSDLEG00000002640) #11	GLG1 (ENSDLEG00000002661) #13	PDPR (ENSDLEG00000002728) #14	ENSDLEG00000002902 #16	EXOSC6 (ENSDLEG00000002955) #17	AARS (ENSDLEG00000002971) #18	DDX19B (ENSDLEG00000003006) #21	ENSDLEG00000003038	ST3GAL2 (ENSDLEG00000003051) #26	FCSK (ENSDLEG00000000262) #27	COG4 (ENSDLEG00000000507) #28	SF3B3 (ENSDLEG00000000586) #29	IL34 (ENSDLEG00000000665) #30	MTSS1L (ENSDLEG00000000682) #31	VAC14 (ENSDLEG00000000721) #32	HYDIN (ENSDLEG00000000925) #36	ENSDLEG00000001329	CALB2 (ENSDLEG00000001346) #37	ENSDLEG00000001360	ZNF23 (ENSDLEG00000001387)	ENSDLEG00000001403	ZNF19 (ENSDLEG00000001410)
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014
Yarkand deer	MODERN SPECIES	27	LDHD (ENSCHYG00000012479)	ZNRF1 (ENSCHYG00000012407) #7	ENSCHYG00000012397	WDR59 (ENSCHYG00000012118) #8	ENSCHYG00000012080	FA2H (ENSCHYG00000012036) #9	MLKL (ENSCHYG00000011909) #10	RFWD3 (ENSCHYG00000011840) #11	GLG1 (ENSCHYG00000011379) #13	ENSCHYG00000011287 #15	ENSCHYG00000011070 #16	ENSCHYG00000010981	AARS1 (ENSCHYG00000010641) #18	ENSCHYG00000010579	ENSCHYG00000010544	DDX19B (ENSCHYG00000009670) #21	ST3GAL2 (ENSCHYG00000009526) #26	ENSCHYG00000009502	FCSK (ENSCHYG00000009116) #27	COG4 (ENSCHYG00000008715) #28	SF3B3 (ENSCHYG00000008563) #29	ENSCHYG00000008508 #30	MTSS2 (ENSCHYG00000008377) #31	VAC14 (ENSCHYG00000008226) #32	VSTM2B (ENSCHYG00000008190)	UQCRFS1 (ENSCHYG00000008146)	ENSCHYG00000008132	ENSCHYG00000008107
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014
Siberian musk deer	MODERN SPECIES	1191	LDHD (ENSMMSG00000004839)	ZNRF1 (ENSMMSG00000004783) #7	WDR59 (ENSMMSG00000018373) #8	ENSMMSG00000018356	ENSMMSG00000018330	FA2H (ENSMMSG00000018289) #9	MLKL (ENSMMSG00000018235) #10	RFWD3 (ENSMMSG00000018162) #11	GLG1 (ENSMMSG00000017967) #13	ENSMMSG00000017909	PDPR (ENSMMSG00000017860) #14	ENSMMSG00000017684 #16	EXOSC6 (ENSMMSG00000017661) #17	AARS1 (ENSMMSG00000017603) #18	ENSMMSG00000017584	DDX19B (ENSMMSG00000017459) #21	ST3GAL2 (ENSMMSG00000017416) #26	FCSK (ENSMMSG00000017323) #27	COG4 (ENSMMSG00000017206) #28	SF3B3 (ENSMMSG00000017099) #29	IL34 (ENSMMSG00000017063) #30	MTSS2 (ENSMMSG00000016927) #31	VAC14 (ENSMMSG00000016839) #32	VSTM2B (ENSMMSG00000016795)	UQCRFS1 (ENSMMSG00000016771)	ENSMMSG00000016751
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00990000206477	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014
Rambouillet Sheep	MODERN SPECIES	5	ZFP1 (ENSOARG00020019072)	LDHD (ENSOARG00020018914)	ZNRF1 (ENSOARG00020018873) #7	WDR59 (ENSOARG00020018528) #8	ENSOARG00020018463	FA2H (ENSOARG00020018407) #9	MLKL (ENSOARG00020018332) #10	RFWD3 (ENSOARG00020018287) #11	ENSOARG00020018207	GLG1 (ENSOARG00020017881) #13	PDPR (ENSOARG00020017590) #14	ENSOARG00020017377 #16	EXOSC6 (ENSOARG00020017335) #17	AARS1 (ENSOARG00020017049) #18	ENSOARG00020016972	DDX19B (ENSOARG00020016614) #21	ST3GAL2 (ENSOARG00020016509) #26	ENSOARG00020016481 #27	ENSOARG00020016321 #27	COG4 (ENSOARG00020015747) #28	SF3B3 (ENSOARG00020015499) #29	ENSOARG00020015443	IL34 (ENSOARG00020015379) #30	MTSS2 (ENSOARG00020015301) #31	VAC14 (ENSOARG00020015150) #32	ENSOARG00020015053	UQCRFS1 (ENSOARG00020014998)
Goat	MODERN SPECIES	9	ENSCHIG00000003189	ZFP1 (ENSCHIG00000015281)	LDHD (ENSCHIG00000012303)	ZNRF1 (ENSCHIG00000010049) #7	WDR59 (ENSCHIG00000010052) #8	ENSCHIG00000021153	FA2H (ENSCHIG00000012134) #9	MLKL (ENSCHIG00000019391) #10	RFWD3 (ENSCHIG00000014158) #11	GLG1 (ENSCHIG00000009836) #13	PDPR (ENSCHIG00000016561) #14	ENSCHIG00000019584 #16	EXOSC6 (ENSCHIG00000007389) #17	AARS1 (ENSCHIG00000015632) #18	ENSCHIG00000008029	DDX19B (ENSCHIG00000006239) #21	ENSCHIG00000018774	DDX19A (ENSCHIG00000020418) #25	ST3GAL2 (ENSCHIG00000023912) #26	FCSK (ENSCHIG00000011265) #27	COG4 (ENSCHIG00000017654) #28	SF3B3 (ENSCHIG00000019822) #29	IL34 (ENSCHIG00000020291) #30	MTSS2 (ENSCHIG00000016928) #31	VAC14 (ENSCHIG00000014231) #32	VSTM2B (ENSCHIG00000024095)	UQCRFS1 (ENSCHIG00000015275)	ENSCHIG00000024397	ENSCHIG00000023033	ENSCHIG00000016683	PRP1 (ENSCHIG00000021747)
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014
American bison	MODERN SPECIES	3209	ENSBBBG00000020094	ENSBBBG00000007468	ZFP1 (ENSBBBG00000020103)	LDHD (ENSBBBG00000020110)	ZNRF1 (ENSBBBG00000020128) #7	WDR59 (ENSBBBG00000020161) #8	FA2H (ENSBBBG00000020178) #9	MLKL (ENSBBBG00000020199) #10	RFWD3 (ENSBBBG00000005452) #11	ENSBBBG00000020210	GLG1 (ENSBBBG00000009077) #13	PDPR (ENSBBBG00000020320) #14	ENSBBBG00000000652 #16	AARS1 (ENSBBBG00000000620) #18	ENSBBBG00000000611	DDX19B (ENSBBBG00000020441) #21	ST3GAL2 (ENSBBBG00000005535) #26	ENSBBBG00000020499 #27	ENSBBBG00000020512 #27	COG4 (ENSBBBG00000020575) #28	SF3B3 (ENSBBBG00000020606) #29	IL34 (ENSBBBG00000020633) #30	MTSS2 (ENSBBBG00000005568) #31	VAC14 (ENSBBBG00000007054) #32	VSTM2B (ENSBBBG00000020832)	UQCRFS1 (ENSBBBG00000020837)
Bos	ANCESTRAL SPECIES	4	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014	ENSGT01100000263496.D.b.b.a.b.v	ENSGT00940000162616
Bos_b	ANCESTRAL SPECIES		ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014	ENSGT00940000162616
Cow	MODERN SPECIES	9	ZFP1 (ENSBTAG00000000868)	LDHD (ENSBTAG00000006779)	ZNRF1 (ENSBTAG00000034689) #7	WDR59 (ENSBTAG00000016878) #8	ENSBTAG00000053121	FA2H (ENSBTAG00000012222) #9	MLKL (ENSBTAG00000012216) #10	RFWD3 (ENSBTAG00000004460) #11	GLG1 (ENSBTAG00000002303) #13	ENSBTAG00000049998	PDPR (ENSBTAG00000016471) #14	CLEC18C (ENSBTAG00000004766) #16	EXOSC6 (ENSBTAG00000053923) #17	AARS1 (ENSBTAG00000019810) #18	ENSBTAG00000053632	DDX19B (ENSBTAG00000020714) #21	ENSBTAG00000052687	DDX19A (ENSBTAG00000003570) #25	ST3GAL2 (ENSBTAG00000054680) #26	FCSK (ENSBTAG00000012985) #27	COG4 (ENSBTAG00000012988) #28	SF3B3 (ENSBTAG00000010627) #29	IL34 (ENSBTAG00000009357) #30	ENSBTAG00000050915	MTSS2 (ENSBTAG00000009358) #31	VAC14 (ENSBTAG00000023795) #32	VSTM2B (ENSBTAG00000018244)	UQCRFS1 (ENSBTAG00000046786)	OR4P4 (ENSBTAG00000053809)
Bos_a	ANCESTRAL SPECIES	22	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00390000006051.a.a.a.a	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014
Wild yak	MODERN SPECIES	639								FA2H (ENSBMUG00000022318) #9	MLKL (ENSBMUG00000022327) #10	RFWD3 (ENSBMUG00000022339) #11	GLG1 (ENSBMUG00000022436) #13	ENSBMUG00000022464	PDPR (ENSBMUG00000022490) #14	ENSBMUG00000022565 #16	AARS1 (ENSBMUG00000022631) #18	DDX19B (ENSBMUG00000022675) #21	ENSBMUG00000022686	ENSBMUG00000022688	ST3GAL2 (ENSBMUG00000022695) #26	FCSK (ENSBMUG00000022710) #27	COG4 (ENSBMUG00000022732) #28	SF3B3 (ENSBMUG00000022752) #29	IL34 (ENSBMUG00000022789) #30	MTSS2 (ENSBMUG00000022815) #31	ENSBMUG00000022821 #32	ENSBMUG00000022832 #32
Domestic yak	MODERN SPECIES	12	ENSBGRG00000013581	ZFP1 (ENSBGRG00000013658)	LDHD (ENSBGRG00000013722)	ENSBGRG00000014041 #7	ENSBGRG00000014175	WDR59 (ENSBGRG00000014214) #8	ENSBGRG00000014830	FA2H (ENSBGRG00000014884) #9	MLKL (ENSBGRG00000014976) #10	RFWD3 (ENSBGRG00000015135) #11	GLG1 (ENSBGRG00000015414) #13	ENSBGRG00000016521	PDPR (ENSBGRG00000016566) #14	ENSBGRG00000016784 #16	AARS1 (ENSBGRG00000017391) #18	DDX19B (ENSBGRG00000017512) #21	ENSBGRG00000017971	DDX19A (ENSBGRG00000018020) #25	ENSBGRG00000018136	ST3GAL2 (ENSBGRG00000018188) #26	FCSK (ENSBGRG00000018254) #27	COG4 (ENSBGRG00000018770) #28	SF3B3 (ENSBGRG00000019103) #29	IL34 (ENSBGRG00000019467) #30	MTSS2 (ENSBGRG00000019583) #31	VAC14 (ENSBGRG00000019691) #32	VSTM2B (ENSBGRG00000020000)	UQCRFS1 (ENSBGRG00000020069)	ENSBGRG00000020116	OR4P4 (ENSBGRG00000020178)	ENSBGRG00000020233
Suina	ANCESTRAL SPECIES	36	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704
Pig	MODERN SPECIES	14	ENSSSCG00000023012	ENSSSCG00000030698	ENSSSCG00000023127	ZFP1 (ENSSSCG00000022668)	LDHD (ENSSSCG00000002712)	ZNRF1 (ENSSSCG00000031462) #7	WDR59 (ENSSSCG00000002714) #8	FA2H (ENSSSCG00000002718) #9	MLKL (ENSSSCG00000002716) #10	RFWD3 (ENSSSCG00000002715) #11	GLG1 (ENSSSCG00000030420) #13	PDPR (ENSSSCG00000002724) #14	ENSSSCG00000002720 #16	EXOSC6 (ENSSSCG00000002719) #17	AARS1 (ENSSSCG00000002723) #18	DDX19B (ENSSSCG00000002722) #21	ENSSSCG00000035447	DDX19A (ENSSSCG00000060523) #25	ENSSSCG00000037473	ST3GAL2 (ENSSSCG00000061257) #26	FCSK (ENSSSCG00000025425) #27	COG4 (ENSSSCG00000027973) #28	SF3B3 (ENSSSCG00000025323) #29	IL34 (ENSSSCG00000040629) #30	MTSS2 (ENSSSCG00000040037) #31	VAC14 (ENSSSCG00000002729) #32	ENSSSCG00000040993	ENSSSCG00000026790 #32	ENSSSCG00000040973 #36	CMTR2 (ENSSSCG00000033156)	CALB2 (ENSSSCG00000002730) #37
Chacoan peccary	MODERN SPECIES	10	ENSCWAG00000002158	ZFP1 (ENSCWAG00000002148)	ENSCWAG00000002133	LDHD (ENSCWAG00000002099)	ZNRF1 (ENSCWAG00000002082) #7	WDR59 (ENSCWAG00000002059) #8	FA2H (ENSCWAG00000002031) #9	MLKL (ENSCWAG00000002018) #10	RFWD3 (ENSCWAG00000001988) #11	GLG1 (ENSCWAG00000001891) #13	PDPR (ENSCWAG00000001860) #14	ENSCWAG00000001830 #16	EXOSC6 (ENSCWAG00000001812) #17	AARS1 (ENSCWAG00000001785) #18	ENSCWAG00000001756	DDX19B (ENSCWAG00000001659) #21	ST3GAL2 (ENSCWAG00000001610) #26	FCSK (ENSCWAG00000001570) #27	COG4 (ENSCWAG00000001524) #28	SF3B3 (ENSCWAG00000001465) #29	IL34 (ENSCWAG00000001437) #30	MTSS2 (ENSCWAG00000001389) #31	ENSCWAG00000001348 #32	ENSCWAG00000001320 #32	ENSCWAG00000001295 #32	HYDIN (ENSCWAG00000001015) #36	CMTR2 (ENSCWAG00000000967)	CALB2 (ENSCWAG00000000947) #37	TLE7 (ENSCWAG00000000912)	ZNF23 (ENSCWAG00000000895)	CHST4 (ENSCWAG00000000882)
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00940000159082.a.b ##14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000153216.a.a.c.b.q.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352
Caniformia	ANCESTRAL SPECIES	1	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Mustelinae	ANCESTRAL SPECIES	6	ENSGT00940000159189	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746
American mink	MODERN SPECIES	2						LDHD (ENSNVIG00000003059)	ZNRF1 (ENSNVIG00000003082) #7	WDR59 (ENSNVIG00000003108) #8	FA2H (ENSNVIG00000003222) #9	RFWD3 (ENSNVIG00000003239) #11	ENSNVIG00000003300	GLG1 (ENSNVIG00000003321) #13	PDPR (ENSNVIG00000003485) #14	ENSNVIG00000003511 #16	AARS1 (ENSNVIG00000003819) #18	DDX19B (ENSNVIG00000005161) #21	ENSNVIG00000005213	SIA4B (ENSNVIG00000005224) #26	FCSK (ENSNVIG00000005261) #27	COG4 (ENSNVIG00000005307) #28	SF3B3 (ENSNVIG00000005374) #29	IL34 (ENSNVIG00000005434) #30	MTSS2 (ENSNVIG00000005489) #31	VAC14 (ENSNVIG00000005599) #32	HYDIN (ENSNVIG00000005676) #36	CMTR2 (ENSNVIG00000006204)	CALB2 (ENSNVIG00000006239) #37	TLE7 (ENSNVIG00000006337)	ZNF23 (ENSNVIG00000006406)	ZNF19 (ENSNVIG00000006468)	CHST4 (ENSNVIG00000006548)
Ferret	MODERN SPECIES	203	BCAR1 (ENSMPUG00000009934)	ENSMPUG00000020017	ENSMPUG00000009939	ENSMPUG00000009942	ZFP1 (ENSMPUG00000009946)	LDHD (ENSMPUG00000009955)	ZNRF1 (ENSMPUG00000009967) #7	WDR59 (ENSMPUG00000009969) #8	FA2H (ENSMPUG00000009982) #9	RFWD3 (ENSMPUG00000010018) #11	ENSMPUG00000020019 ##12	GLG1 (ENSMPUG00000010025) #13	PDPR (ENSMPUG00000010038) #14	ENSMPUG00000010047 #16	AARS1 (ENSMPUG00000010060) #18	DDX19B (ENSMPUG00000010084) #21	ENSMPUG00000010211	ST3GAL2 (ENSMPUG00000010250) #26	FCSK (ENSMPUG00000010257) #27	COG4 (ENSMPUG00000010263) #28	SF3B3 (ENSMPUG00000010277) #29	IL34 (ENSMPUG00000010299) #30	MTSS2 (ENSMPUG00000010304) #31	VAC14 (ENSMPUG00000010309) #32	HYDIN (ENSMPUG00000010322) #36
Ursidae	ANCESTRAL SPECIES	8	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278.f
Ursus	ANCESTRAL SPECIES	41													ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746
Polar bear	MODERN SPECIES	245														ENSUMAG00000016969 #16	AARS1 (ENSUMAG00000016975) #18	DDX19B (ENSUMAG00000016980) #21	ENSUMAG00000016989	ENSUMAG00000016993	ENSUMAG00000016995	ST3GAL2 (ENSUMAG00000016996) #26	FCSK (ENSUMAG00000017023) #27	COG4 (ENSUMAG00000017444) #28	SF3B3 (ENSUMAG00000017757) #29	IL34 (ENSUMAG00000017778) #30	VAC14 (ENSUMAG00000017793) #32	ENSUMAG00000017842 #36	CMTR2 (ENSUMAG00000017846)	CALB2 (ENSUMAG00000017852) #37	ZNF23 (ENSUMAG00000017887)	ZNF19 (ENSUMAG00000017894)	CHST4 (ENSUMAG00000017901)
American black bear	MODERN SPECIES	381												ENSUAMG00000007010 #16	ENSUAMG00000007009 #17	AARS1 (ENSUAMG00000007008) #18	ENSUAMG00000007005	DDX19B (ENSUAMG00000006974) #21	ENSUAMG00000006971	DDX19A (ENSUAMG00000006969) #25	ST3GAL2 (ENSUAMG00000006967) #26	FCSK (ENSUAMG00000006965) #27	COG4 (ENSUAMG00000006791) #28	SF3B3 (ENSUAMG00000006780) #29	IL34 (ENSUAMG00000006776) #30	MTSS2 (ENSUAMG00000006748) #31	VAC14 (ENSUAMG00000006738) #32
Canidae	ANCESTRAL SPECIES	11	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01080000257453.g	ENSGT00940000154417.a.b #21	ENSGT01080000257453.h	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278.f
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01080000257453.g	ENSGT00940000154417.a.b #21	ENSGT01080000257453.h	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278.f
Dingo	MODERN SPECIES	373	ENSCAFG00020001567	ZFP1 (ENSCAFG00020001547)	LDHD (ENSCAFG00020001460)	ZNRF1 (ENSCAFG00020001414) #7	WDR59 (ENSCAFG00020001379) #8	FA2H (ENSCAFG00020001330) #9	RFWD3 (ENSCAFG00020001249) #11	ENSCAFG00020001230	GLG1 (ENSCAFG00020000344) #13	ENSCAFG00020020993 #15	PDPR (ENSCAFG00020020984) #14	ENSCAFG00020020978 #16	EXOSC6 (ENSCAFG00020020974) #17	AARS1 (ENSCAFG00020020967) #18	ENSCAFG00020020964	DDX19B (ENSCAFG00020020959) #21	ENSCAFG00020020958	DDX19A (ENSCAFG00020020954) #25	ST3GAL2 (ENSCAFG00020020951) #26	FCSK (ENSCAFG00020020940) #27	COG4 (ENSCAFG00020020932) #28	SF3B3 (ENSCAFG00020020912) #29	IL34 (ENSCAFG00020020898) #30	MTSS2 (ENSCAFG00020020896) #31	VAC14 (ENSCAFG00020020892) #32	ENSCAFG00020020877 #36	CMTR2 (ENSCAFG00020020874)	CALB2 (ENSCAFG00020020867) #37	ZNF23 (ENSCAFG00020020862)	ENSCAFG00020020856	CHST4 (ENSCAFG00020020852)
Dog	MODERN SPECIES	33	ENSCAFG00845024500	CTRB2 (ENSCAFG00845024637)	ZFP1 (ENSCAFG00845024823)	LDHD (ENSCAFG00845024882)	ZNRF1 (ENSCAFG00845025027) #7	WDR59 (ENSCAFG00845025137) #8	FA2H (ENSCAFG00845025633) #9	RFWD3 (ENSCAFG00845025762) #11	GLG1 (ENSCAFG00845025946) #13	ENSCAFG00845026251	ENSCAFG00845026290	ENSCAFG00845004905 #14	CLEC18C (ENSCAFG00845004916) #16	ENSCAFG00845004932 #17	AARS1 (ENSCAFG00845004979) #18	DDX19B (ENSCAFG00845005025) #21	ENSCAFG00845005070	ST3GAL2 (ENSCAFG00845005084) #26	FCSK (ENSCAFG00845005118) #27	COG4 (ENSCAFG00845005204) #28	SF3B3 (ENSCAFG00845005230) #29	IL34 (ENSCAFG00845005263) #30	MTSS2 (ENSCAFG00845005284) #31	VAC14 (ENSCAFG00845005319) #32	HYDIN (ENSCAFG00845005362) #36	CMTR2 (ENSCAFG00845005419)	CALB2 (ENSCAFG00845005447) #37	TLE7 (ENSCAFG00845005490)	ZNF23 (ENSCAFG00845005511)	ZNF19 (ENSCAFG00845005533)	CHST4 (ENSCAFG00845005592)
Red fox	MODERN SPECIES	86													ENSVVUG00000018042 #16	AARS (ENSVVUG00000018036) #18	ENSVVUG00000018034	DDX19B (ENSVVUG00000018012) #21	ST3GAL2 (ENSVVUG00000018006) #26	FUK (ENSVVUG00000017963) #27	COG4 (ENSVVUG00000017945) #28	SF3B3 (ENSVVUG00000017922) #29	IL34 (ENSVVUG00000017916) #30	MTSS2 (ENSVVUG00000017909) #31	VAC14 (ENSVVUG00000017896) #32	HYDIN (ENSVVUG00000017714) #36	CMTR2 (ENSVVUG00000017698)	CALB2 (ENSVVUG00000017693) #37	TLE7 (ENSVVUG00000017686)	ZNF23 (ENSVVUG00000017684)	ZNF19 (ENSVVUG00000017681)	CHST4 (ENSVVUG00000017673)	ENSVVUG00000017669
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000153216.a.a.c.b.q.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377
Cat	MODERN SPECIES	246	ENSFCAG00000015359	ZFP1 (ENSFCAG00000024047)	LDHD (ENSFCAG00000012193)	ZNRF1 (ENSFCAG00000012191) #7	WDR59 (ENSFCAG00000014311) #8	FA2H (ENSFCAG00000015148) #9	RFWD3 (ENSFCAG00000026835) #11	GLG1 (ENSFCAG00000002726) #13	PDPR (ENSFCAG00000049372) #14	ENSFCAG00000009475 #15	ENSFCAG00000009480 #16	EXOSC6 (ENSFCAG00000046021) #17	AARS1 (ENSFCAG00000009482) #18	ENSFCAG00000038858	ENSFCAG00000039011	DDX19B (ENSFCAG00000029489) #21	ST3GAL2 (ENSFCAG00000030674) #26	FCSK (ENSFCAG00000009485) #27	COG4 (ENSFCAG00000009486) #28	SF3B3 (ENSFCAG00000009487) #29	IL34 (ENSFCAG00000028376) #30	MTSS2 (ENSFCAG00000030321) #31	VAC14 (ENSFCAG00000005383) #32	HYDIN (ENSFCAG00000035742) #36	CMTR2 (ENSFCAG00000030250)	CALB2 (ENSFCAG00000010199) #37	TLE7 (ENSFCAG00000025414)	ZNF19 (ENSFCAG00000033576)	ENSFCAG00000032889	CHST4 (ENSFCAG00000001730)	TAT (ENSFCAG00000004379)
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000153216.a.a.c.b.q.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377
Tiger	MODERN SPECIES	47														ENSPTIG00000005459 #16	AARS1 (ENSPTIG00000021477) #18	DDX19B (ENSPTIG00000000185) #21	ENSPTIG00000007090	DDX19A (ENSPTIG00000008190) #25	ENSPTIG00000010223	ST3GAL2 (ENSPTIG00000011620) #26	FCSK (ENSPTIG00000011986) #27	COG4 (ENSPTIG00000017436) #28	SF3B3 (ENSPTIG00000020382) #29	IL34 (ENSPTIG00000010087) #30	MTSS2 (ENSPTIG00000013869) #31	VAC14 (ENSPTIG00000018582) #32	HYDIN (ENSPTIG00000000797) #36	CMTR2 (ENSPTIG00000019568)	CALB2 (ENSPTIG00000020486) #37	TLE7 (ENSPTIG00000004176)	ZNF23 (ENSPTIG00000006872)
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00940000153216.a.a.c.b.q.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377
lion	MODERN SPECIES	15	ENSPLOG00000016961	ENSPLOG00000016888	ZFP1 (ENSPLOG00000016850)	LDHD (ENSPLOG00000016677)	ZNRF1 (ENSPLOG00000016644) #7	WDR59 (ENSPLOG00000016323) #8	FA2H (ENSPLOG00000016235) #9	RFWD3 (ENSPLOG00000016195) #11	GLG1 (ENSPLOG00000015679) #13	ENSPLOG00000015593 #14	ENSPLOG00000015500 #15	ENSPLOG00000015100 #16	EXOSC6 (ENSPLOG00000015053) #17	AARS1 (ENSPLOG00000014996) #18	ENSPLOG00000014951	DDX19B (ENSPLOG00000014792) #21	ENSPLOG00000014627 #25	ST3GAL2 (ENSPLOG00000014572) #26	FCSK (ENSPLOG00000014457) #27	COG4 (ENSPLOG00000014349) #28	SF3B3 (ENSPLOG00000014278) #29	ENSPLOG00000014106 #30	MTSS2 (ENSPLOG00000013769) #31	VAC14 (ENSPLOG00000013688) #32	HYDIN (ENSPLOG00000012780) #36	CMTR2 (ENSPLOG00000012715)	CALB2 (ENSPLOG00000012534) #37	TLE7 (ENSPLOG00000012411)	ENSPLOG00000012372	ZNF23 (ENSPLOG00000012301)	ZNF19 (ENSPLOG00000012217)
leopard	MODERN SPECIES	28													ENSPPRG00000001602 #16	EXOSC6 (ENSPPRG00000021385) #17	AARS1 (ENSPPRG00000013214) #18	DDX19B (ENSPPRG00000012923) #21	ENSPPRG00000010048	DDX19A (ENSPPRG00000009999) #25	ENSPPRG00000008883	ST3GAL2 (ENSPPRG00000008166) #26	FCSK (ENSPPRG00000007362) #27	COG4 (ENSPPRG00000003206) #28	SF3B3 (ENSPPRG00000001686) #29	IL34 (ENSPPRG00000001259) #30	MTSS2 (ENSPPRG00000000123) #31	VAC14 (ENSPPRG00000023649) #32	HYDIN (ENSPPRG00000016374) #36	CMTR2 (ENSPPRG00000020552)	CALB2 (ENSPPRG00000008922) #37	TLE7 (ENSPPRG00000007407)	ZNF23 (ENSPPRG00000006925)
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000153216.a.a.c.b.q.a.b	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278.f
Equus	ANCESTRAL SPECIES	20	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00740000117161.e.a.b	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278.e.a.a
Horse	MODERN SPECIES	22	ENSECAG00000016086	ZFP1 (ENSECAG00000014727)	LDHD (ENSECAG00000010322)	ZNRF1 (ENSECAG00000030990) #7	WDR59 (ENSECAG00000022834) #8	FA2H (ENSECAG00000020245) #9	MLKL (ENSECAG00000017558) #10	RFWD3 (ENSECAG00000014965) #11	ENSECAG00000035993	GLG1 (ENSECAG00000016433) #13	PDPR (ENSECAG00000023598) #14	ENSECAG00000012835 #16	EXOSC6 (ENSECAG00000039860) #17	AARS1 (ENSECAG00000008561) #18	ENSECAG00000033685	DDX19B (ENSECAG00000017635) #21	DDX19A (ENSECAG00000051660) #25	ENSECAG00000034960	ST3GAL2 (ENSECAG00000023798) #26	FCSK (ENSECAG00000012351) #27	COG4 (ENSECAG00000014431) #28	SF3B3 (ENSECAG00000014053) #29	IL34 (ENSECAG00000012327) #30	MTSS2 (ENSECAG00000000217) #31	VAC14 (ENSECAG00000012459) #32	HYDIN (ENSECAG00000012360) #36	CMTR2 (ENSECAG00000006573)	CALB2 (ENSECAG00000017208) #37	ENSECAG00000034456	ZNF23 (ENSECAG00000015829)	ZNF19 (ENSECAG00000014798)
Donkey	DUPLICATION
Donkey	MODERN SPECIES	20	BCAR1 (ENSEASG00005013475)	ENSEASG00005013473	ENSEASG00005013464	ZFP1 (ENSEASG00005034789)	LDHD (ENSEASG00005013448)	ZNRF1 (ENSEASG00005013444) #7	WDR59 (ENSEASG00005013439) #8	FA2H (ENSEASG00005013435) #9	MLKL (ENSEASG00005013434) #10	RFWD3 (ENSEASG00005013430) #11	ENSEASG00005024084	ENSEASG00005013419 #13	ENSEASG00005013415 #14	ENSEASG00005013412 #16	ENSEASG00005027260	DDX19B (ENSEASG00005037663) #21	AARS1 (ENSEASG00005013408) #18	ENSEASG00005013407	ENSEASG00005013405 #21	ST3GAL2 (ENSEASG00005013401) #26	FCSK (ENSEASG00005013391) #27	COG4 (ENSEASG00005013387) #28	SF3B3 (ENSEASG00005013376) #29	IL34 (ENSEASG00005013375) #30	MTSS2 (ENSEASG00005013371) #31	VAC14 (ENSEASG00005013366) #32	CMTR2 (ENSEASG00005013317)	CALB2 (ENSEASG00005013313) #37	TLE7 (ENSEASG00005013310)	ENSEASG00005013308	ZNF23 (ENSEASG00005013306)
Donkey	MODERN SPECIES	20	ZFP1 (ENSEASG00005034789)	LDHD (ENSEASG00005013448)	ZNRF1 (ENSEASG00005013444) #7	WDR59 (ENSEASG00005013439) #8	FA2H (ENSEASG00005013435) #9	MLKL (ENSEASG00005013434) #10	RFWD3 (ENSEASG00005013430) #11	ENSEASG00005024084	ENSEASG00005013419 #13	ENSEASG00005013415 #14	ENSEASG00005013412 #16	ENSEASG00005027260	DDX19B (ENSEASG00005037663) #21	AARS1 (ENSEASG00005013408) #18	ENSEASG00005013407	ENSEASG00005013405 #21	ST3GAL2 (ENSEASG00005013401) #26	FCSK (ENSEASG00005013391) #27	COG4 (ENSEASG00005013387) #28	SF3B3 (ENSEASG00005013376) #29	IL34 (ENSEASG00005013375) #30	MTSS2 (ENSEASG00005013371) #31	VAC14 (ENSEASG00005013366) #32	CMTR2 (ENSEASG00005013317)	CALB2 (ENSEASG00005013313) #37	TLE7 (ENSEASG00005013310)	ENSEASG00005013308	ZNF23 (ENSEASG00005013306)	ENSEASG00005038445	CHST4 (ENSEASG00005029334)	ENSEASG00005028675
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746
Megabat	MODERN SPECIES	1583													ENSPVAG00000000665 #16	EXOSC6 (ENSPVAG00000000668) #17	AARS1 (ENSPVAG00000000669) #18	DDX19B (ENSPVAG00000000673) #21	ENSPVAG00000000676	ST3GAL2 (ENSPVAG00000000678) #26	FCSK (ENSPVAG00000000680) #27	COG4 (ENSPVAG00000000682) #28	SF3B3 (ENSPVAG00000000684) #29
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746
Microbat	MODERN SPECIES	1025				LDHD (ENSMLUG00000010489)	ZNRF1 (ENSMLUG00000024337) #7	WDR59 (ENSMLUG00000000584) #8	FA2H (ENSMLUG00000012806) #9	MLKL (ENSMLUG00000012797) #10	RFWD3 (ENSMLUG00000012786) #11	GLG1 (ENSMLUG00000012764) #13	ENSMLUG00000024675 ##14	ENSMLUG00000009253 ##14	ENSMLUG00000007406 #16	EXOSC6 (ENSMLUG00000023828) #17	AARS1 (ENSMLUG00000007431) #18	DDX19B (ENSMLUG00000007447) #21	ENSMLUG00000007474 #25	ST3GAL2 (ENSMLUG00000000116) #26	FCSK (ENSMLUG00000007490) #27	COG4 (ENSMLUG00000007539) #28	SF3B3 (ENSMLUG00000014607) #29	ENSMLUG00000029950 #31	VAC14 (ENSMLUG00000016155) #32	HYDIN (ENSMLUG00000016168) #36	CMTR2 (ENSMLUG00000000607)	CALB2 (ENSMLUG00000008627) #37	TLE7 (ENSMLUG00000027365)	ZNF23 (ENSMLUG00000003725)	ENSMLUG00000030681	CHST4 (ENSMLUG00000008656)	TAT (ENSMLUG00000008659)
Greater horseshoe bat	MODERN SPECIES	6	ENSRFEG00010014376	ENSRFEG00010014317	ZFP1 (ENSRFEG00010014250)	LDHD (ENSRFEG00010014196)	ENSRFEG00010014113	ZNRF1 (ENSRFEG00010013998) #7	WDR59 (ENSRFEG00010013888) #8	FA2H (ENSRFEG00010013821) #9	MLKL (ENSRFEG00010013780) #10	RFWD3 (ENSRFEG00010013703) #11	GLG1 (ENSRFEG00010013142) #13	PDPR (ENSRFEG00010013064) #14	ENSRFEG00010012849 #16	EXOSC6 (ENSRFEG00010012832) #17	AARS1 (ENSRFEG00010012764) #18	DDX19B (ENSRFEG00010012475) #21	DDX19A (ENSRFEG00010012387) #25	ST3GAL2 (ENSRFEG00010012285) #26	FCSK (ENSRFEG00010012061) #27	COG4 (ENSRFEG00010011952) #28	SF3B3 (ENSRFEG00010011817) #29	IL34 (ENSRFEG00010011770) #30	MTSS2 (ENSRFEG00010011673) #31	VAC14 (ENSRFEG00010011570) #32	ENSRFEG00010011532	HYDIN (ENSRFEG00010009988) #36	CMTR2 (ENSRFEG00010009910)	CALB2 (ENSRFEG00010009864) #37	TLE7 (ENSRFEG00010009764)	ZNF23 (ENSRFEG00010009684)	ZNF19 (ENSRFEG00010009535)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154417.a.b #21
Hedgehog	MODERN SPECIES	5113																DDX19B (ENSEEUG00000009506) #21
Common shrew	MODERN SPECIES	3952																DDX19B (ENSSARG00000011623) #21
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00970000193437	ENSGT00940000154417.a.a #25	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Glires	ANCESTRAL SPECIES	6	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT01100000264521	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000162746
Lagomorpha	ANCESTRAL SPECIES	19	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.b.b	ENSGT00940000153216.a.a.c.b.q.b.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT01100000264521	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000163278	ENSGT00940000162746
Pika	MODERN SPECIES	2467														ENSOPRG00000003337 #16	AARS1 (ENSOPRG00000003373) #18	DDX19B (ENSOPRG00000003423) #21	DDX19A (ENSOPRG00000003451) #25	ST3GAL2 (ENSOPRG00000003481) #26
Rabbit	MODERN SPECIES	16	BCAR1 (ENSOCUG00000015992)	ENSOCUG00000011106	ENSOCUG00000024901	ENSOCUG00000012429	ZFP1 (ENSOCUG00000001924)	LDHD (ENSOCUG00000001913)	ZNRF1 (ENSOCUG00000023442) #7	WDR59 (ENSOCUG00000011087) #8	FA2H (ENSOCUG00000030940) #9	RFWD3 (ENSOCUG00000009152) #11	GLG1 (ENSOCUG00000003425) #13	PDPR (ENSOCUG00000005470) #14	ENSOCUG00000001761 #16	AARS1 (ENSOCUG00000008872) #18	ENSOCUG00000030085	DDX19B (ENSOCUG00000004095) #21	ENSOCUG00000030722	DDX19A (ENSOCUG00000038134) #25	ST3GAL2 (ENSOCUG00000004107) #26	ENSOCUG00000024306	FCSK (ENSOCUG00000004115) #27	COG4 (ENSOCUG00000004130) #28	SF3B3 (ENSOCUG00000004139) #29	IL34 (ENSOCUG00000022125) #30	MTSS2 (ENSOCUG00000015113) #31	VAC14 (ENSOCUG00000021280) #32	HYDIN (ENSOCUG00000011895) #36	ENSOCUG00000022443	CMTR2 (ENSOCUG00000010218)	CALB2 (ENSOCUG00000015619) #37	TLE7 (ENSOCUG00000024140)
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT01100000264521	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000162746
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT01100000264521	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377
Hystricomorpha	ANCESTRAL SPECIES	22	ENSGT00940000153216.a.a.c.b.r.f	ENSGT00940000153216.a.a.c.b.r.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000162746
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000018037	ENSHGLG00000016341	ZFP1 (ENSHGLG00000032691)	LDHD (ENSHGLG00000016453)	ZNRF1 (ENSHGLG00000014332) #7	WDR59 (ENSHGLG00000010982) #8	FA2H (ENSHGLG00000011447) #9	RFWD3 (ENSHGLG00000012627) #11	GLG1 (ENSHGLG00000013832) #13	ENSHGLG00000048099	ENSHGLG00000012857 #14	ENSHGLG00000014294 #16	EXOSC6 (ENSHGLG00000021313) #17	AARS1 (ENSHGLG00000011756) #18	ENSHGLG00000032318	DDX19B (ENSHGLG00000009955) #21	ENSHGLG00000036535	DDX19A (ENSHGLG00000011681) #25	ST3GAL2 (ENSHGLG00000044574) #26	FCSK (ENSHGLG00000012100) #27	COG4 (ENSHGLG00000019190) #28	SF3B3 (ENSHGLG00000010135) #29	IL34 (ENSHGLG00000012281) #30	MTSS1L (ENSHGLG00000046719) #31	VAC14 (ENSHGLG00000009916) #32	HYDIN (ENSHGLG00000032026) #36	ENSHGLG00000014406	ENSHGLG00000042715	CMTR2 (ENSHGLG00000013565)	CALB2 (ENSHGLG00000017124) #37	ENSHGLG00000038201
Hystricomorpha_a	ANCESTRAL SPECIES	22	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r.f	ENSGT00940000153216.a.a.c.b.r.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704
Hystricomorpha_b	ANCESTRAL SPECIES	15	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r.f	ENSGT00940000153216.a.a.c.b.r.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704
Degu	MODERN SPECIES	52	ENSODEG00000013237	ENSODEG00000014533	ZFP1 (ENSODEG00000014404)	LDHD (ENSODEG00000013403)	ENSODEG00000013782 #7	WDR59 (ENSODEG00000014115) #8	FA2H (ENSODEG00000015464) #9	ENSODEG00000013539	RFWD3 (ENSODEG00000013462) #11	GLG1 (ENSODEG00000014011) #13	PDPR (ENSODEG00000014206) #14	ENSODEG00000020359	ENSODEG00000014787 #16	EXOSC6 (ENSODEG00000020448) #17	ENSODEG00000014435 #18	DDX19B (ENSODEG00000014050) #21	DDX19A (ENSODEG00000014238) #25	ST3GAL2 (ENSODEG00000013892) #26	ENSODEG00000020190	FCSK (ENSODEG00000014046) #27	ENSODEG00000014686 #28	SF3B3 (ENSODEG00000014154) #29	IL34 (ENSODEG00000014364) #30	MTSS2 (ENSODEG00000013647) #31	VAC14 (ENSODEG00000014293) #32	ENSODEG00000014323 #36	ENSODEG00000014592 #37	ENSODEG00000014032	ENSODEG00000014851	TAT (ENSODEG00000014121)	ENSODEG00000014262
Long-tailed chinchilla	MODERN SPECIES	191	ENSCLAG00000003162	ENSCLAG00000003968	ZFP1 (ENSCLAG00000004223)	LDHD (ENSCLAG00000006210)	ZNRF1 (ENSCLAG00000006646) #7	WDR59 (ENSCLAG00000008773) #8	FA2H (ENSCLAG00000004239) #9	ENSCLAG00000004307	ENSCLAG00000004718 #10	RFWD3 (ENSCLAG00000003735) #11	GLG1 (ENSCLAG00000004578) #13	PDPR (ENSCLAG00000003939) #14	ENSCLAG00000003813 #16	EXOSC6 (ENSCLAG00000004121) #17	AARS1 (ENSCLAG00000004366) #18	DDX19B (ENSCLAG00000005224) #21	DDX19A (ENSCLAG00000004996) #25	ST3GAL2 (ENSCLAG00000005263) #26	FCSK (ENSCLAG00000005770) #27	COG4 (ENSCLAG00000006686) #28	SF3B3 (ENSCLAG00000003921) #29	IL34 (ENSCLAG00000003136) #30	MTSS2 (ENSCLAG00000003423) #31	VAC14 (ENSCLAG00000003905) #32	HYDIN (ENSCLAG00000012219) #36	CMTR2 (ENSCLAG00000008920)	CALB2 (ENSCLAG00000004773) #37	TLE7 (ENSCLAG00000005771)	ENSCLAG00000005991	ZNF23 (ENSCLAG00000006028)	CHST4 (ENSCLAG00000017669)
Guinea pig	MODERN SPECIES	22	CFDP1 (ENSCPOG00000000695)	BCAR1 (ENSCPOG00000014590)	ENSCPOG00000014582	ZFP1 (ENSCPOG00000000634)	LDHD (ENSCPOG00000010200)	ZNRF1 (ENSCPOG00000010190) #7	WDR59 (ENSCPOG00000010169) #8	FA2H (ENSCPOG00000015264) #9	MLKL (ENSCPOG00000008080) #10	RFWD3 (ENSCPOG00000000856) #11	GLG1 (ENSCPOG00000014381) #13	PDPR (ENSCPOG00000020169) #14	ENSCPOG00000002368 #16	ENSCPOG00000002371 #17	AARS1 (ENSCPOG00000002373) #18	DDX19B (ENSCPOG00000006743) #21	ST3GAL2 (ENSCPOG00000035552) #26	FCSK (ENSCPOG00000015035) #27	COG4 (ENSCPOG00000015042) #28	SF3B3 (ENSCPOG00000000586) #29	IL34 (ENSCPOG00000039462) #30	MTSS2 (ENSCPOG00000021684) #31	VAC14 (ENSCPOG00000001773) #32	ENSCPOG00000031446 #36	CMTR2 (ENSCPOG00000015680)	CALB2 (ENSCPOG00000010380) #37	ENSCPOG00000021516	ZNF23 (ENSCPOG00000040137)	CHST4 (ENSCPOG00000021963)	TAT (ENSCPOG00000008010)	ENSCPOG00000012155
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000264521	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	8	CFDP1 (ENSSVLG00005018315)	BCAR1 (ENSSVLG00005018450)	ENSSVLG00005018505	ZFP1 (ENSSVLG00005018583)	LDHD (ENSSVLG00005018665)	ZNRF1 (ENSSVLG00005018778) #7	WDR59 (ENSSVLG00005018837) #8	FA2H (ENSSVLG00005018910) #9	MLKL (ENSSVLG00005018999) #10	RFWD3 (ENSSVLG00005019092) #11	GLG1 (ENSSVLG00005019575) #13	PDPR (ENSSVLG00005020293) #14	ENSSVLG00005020455 #16	EXOSC6 (ENSSVLG00005020664) #17	AARS1 (ENSSVLG00005020683) #18	ENSSVLG00005020737 #21	DDX19A (ENSSVLG00005020899) #25	ENSSVLG00005020944	ST3GAL2 (ENSSVLG00005020988) #26	FCSK (ENSSVLG00005021026) #27	COG4 (ENSSVLG00005021216) #28	SF3B3 (ENSSVLG00005021597) #29	ENSSVLG00005021652 #30	MTSS2 (ENSSVLG00005021695) #31	VAC14 (ENSSVLG00005021756) #32	HYDIN (ENSSVLG00005021881) #36	ENSSVLG00005022799	ENSSVLG00005022847	CMTR2 (ENSSVLG00005022862)	CALB2 (ENSSVLG00005022894) #37	TLE7 (ENSSVLG00005023018)
Eurasian red squirrel	MODERN SPECIES	17	ENSSVLG00005009358	ENSSVLG00005009336	CNTNAP2 (ENSSVLG00005009165)	CUL1 (ENSSVLG00005008993)	ENSSVLG00005008353	PDIA4 (ENSSVLG00005008187)	ZNF786 (ENSSVLG00005008156)	ZNF425 (ENSSVLG00005008113)	ZNF398 (ENSSVLG00005008062)	ZNF282 (ENSSVLG00005008008)	ZNF783 (ENSSVLG00005007957)	ENSSVLG00005007899	ZNF777 (ENSSVLG00005007807)	ZNF746 (ENSSVLG00005007767)	ENSSVLG00005007745	ENSSVLG00005007724 #21	KRBA1 (ENSSVLG00005007562)	ZNF467 (ENSSVLG00005007469)	ZNF862 (ENSSVLG00005009981)	ATP6V0E2 (ENSSVLG00005009947)	RARRES2 (ENSSVLG00005009878)	ENSSVLG00005009843	ENSSVLG00005009816	ENSSVLG00005009784	GIMAP8 (ENSSVLG00005009759)	ENSSVLG00005009717	GIMAP4 (ENSSVLG00005009689)	GIMAP6 (ENSSVLG00005009656)	GIMAP1 (ENSSVLG00005009619)	ENSSVLG00005009592	ENSSVLG00005009542
Marmotini	ANCESTRAL SPECIES	17	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT01100000264521	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000264521	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00530000063506.B.p
Squirrel	MODERN SPECIES	75	CFDP1 (ENSSTOG00000004124)	BCAR1 (ENSSTOG00000004102)	ENSSTOG00000004080	ZFP1 (ENSSTOG00000022317)	LDHD (ENSSTOG00000006254)	ZNRF1 (ENSSTOG00000026020) #7	WDR59 (ENSSTOG00000010240) #8	FA2H (ENSSTOG00000010231) #9	MLKL (ENSSTOG00000010220) #10	RFWD3 (ENSSTOG00000010196) #11	GLG1 (ENSSTOG00000010174) #13	PDPR (ENSSTOG00000009422) #14	ENSSTOG00000010164 #16	EXOSC6 (ENSSTOG00000006849) #17	AARS1 (ENSSTOG00000006856) #18	DDX19B (ENSSTOG00000025733) #21	DDX19A (ENSSTOG00000006938) #25	ST3GAL2 (ENSSTOG00000006961) #26	FCSK (ENSSTOG00000006970) #27	COG4 (ENSSTOG00000007026) #28	SF3B3 (ENSSTOG00000007065) #29	IL34 (ENSSTOG00000015365) #30	MTSS2 (ENSSTOG00000022597) #31	VAC14 (ENSSTOG00000010625) #32	ENSSTOG00000032230 #36	CMTR2 (ENSSTOG00000029180)	CALB2 (ENSSTOG00000008228) #37	TLE7 (ENSSTOG00000026085)	ZNF23 (ENSSTOG00000033277)	CHST4 (ENSSTOG00000003061)	ENSSTOG00000022167
Arctic ground squirrel	MODERN SPECIES	209	CFDP1 (ENSUPAG00010015442)	BCAR1 (ENSUPAG00010015411)	ENSUPAG00010015388	LDHD (ENSUPAG00010015368)	ENSUPAG00010015356 #7	WDR59 (ENSUPAG00010015301) #8	FA2H (ENSUPAG00010015288) #9	MLKL (ENSUPAG00010015276) #10	RFWD3 (ENSUPAG00010015257) #11	GLG1 (ENSUPAG00010015212) #13	PDPR (ENSUPAG00010015193) #14	ENSUPAG00010015179 #16	EXOSC6 (ENSUPAG00010015174) #17	AARS1 (ENSUPAG00010015159) #18	ENSUPAG00010015150	DDX19B (ENSUPAG00010015108) #21	ENSUPAG00010015095	ST3GAL2 (ENSUPAG00010015073) #26	ENSUPAG00010015068	FCSK (ENSUPAG00010015050) #27	COG4 (ENSUPAG00010015009) #28	SF3B3 (ENSUPAG00010014970) #29	IL34 (ENSUPAG00010014920) #30	MTSS2 (ENSUPAG00010014858) #31	VAC14 (ENSUPAG00010014840) #32	ENSUPAG00010014837	ENSUPAG00010014815 #36	CMTR2 (ENSUPAG00010014810)	CALB2 (ENSUPAG00010014770) #37	TLE7 (ENSUPAG00010014743)	ZNF23 (ENSUPAG00010014732)
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	43	BCAR1 (ENSMMMG00000012730)	ENSMMMG00000012747	ENSMMMG00000012754	ZFP1 (ENSMMMG00000012774)	LDHD (ENSMMMG00000012779)	ZNRF1 (ENSMMMG00000012822) #7	WDR59 (ENSMMMG00000012840) #8	FA2H (ENSMMMG00000012925) #9	MLKL (ENSMMMG00000012932) #10	RFWD3 (ENSMMMG00000012944) #11	GLG1 (ENSMMMG00000013000) #13	ENSMMMG00000013049 #15	PDPR (ENSMMMG00000013052) #14	ENSMMMG00000013087 #16	AARS1 (ENSMMMG00000013100) #18	DDX19B (ENSMMMG00000013116) #21	DDX19A (ENSMMMG00000013166) #25	ENSMMMG00000013185	ST3GAL2 (ENSMMMG00000013190) #26	FCSK (ENSMMMG00000013204) #27	COG4 (ENSMMMG00000013279) #28	SF3B3 (ENSMMMG00000013300) #29	IL34 (ENSMMMG00000013345) #30	VAC14 (ENSMMMG00000013378) #32	ENSMMMG00000013413 #36	CMTR2 (ENSMMMG00000013435)	CALB2 (ENSMMMG00000013442) #37	TLE7 (ENSMMMG00000013498)	ENSMMMG00000013523	ENSMMMG00000013530	ENSMMMG00000013533
Alpin marmot	MODERN SPECIES	490																ENSMMMG00000000450 #21
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746
Kangaroo rat	MODERN SPECIES	337	ENSDORG00000026949	Tmem170 (ENSDORG00000023426)	Cfdp1 (ENSDORG00000006329)	Bcar1 (ENSDORG00000006327)	Ctrb1 (ENSDORG00000006317)	Zfp1 (ENSDORG00000011934)	Ldhd (ENSDORG00000011933)	Znrf1 (ENSDORG00000011928) #7	Wdr59 (ENSDORG00000004163) #8	Fa2h (ENSDORG00000023167) #9	Rfwd3 (ENSDORG00000007727) #11	Glg1 (ENSDORG00000007724) #13	Pdpr (ENSDORG00000004105) #14	Clec18a (ENSDORG00000004108) #16	Aars (ENSDORG00000004110) #18	Ddx19b (ENSDORG00000004421) #21	Ddx19a (ENSDORG00000002078) #25	St3gal2 (ENSDORG00000025194) #26	Fcsk (ENSDORG00000014055) #27	Cog4 (ENSDORG00000014062) #28	Sf3b3 (ENSDORG00000014176) #29	Il34 (ENSDORG00000009844) #30	Mtss2 (ENSDORG00000011119) #31	Vac14 (ENSDORG00000011122) #32	ENSDORG00000023244 #36	Cmtr2 (ENSDORG00000025105)	Calb2 (ENSDORG00000016045) #37	Tle7 (ENSDORG00000023639)	Zfp612 (ENSDORG00000011582)	Chst4 (ENSDORG00000002830)	Tat (ENSDORG00000002831)
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746
Muroidea	ANCESTRAL SPECIES	19	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746
Upper Galilee mountains blind mole rat	MODERN SPECIES	1825	Tmem170 (ENSNGAG00000007423)	Cfdp1 (ENSNGAG00000018342)	Bcar1 (ENSNGAG00000004088)	Ctrb1 (ENSNGAG00000010514)	Zfp1 (ENSNGAG00000016319)	Ldhd (ENSNGAG00000014589)	Znrf1 (ENSNGAG00000017540) #7	Wdr59 (ENSNGAG00000012451) #8	Fa2h (ENSNGAG00000017992) #9	Mlkl (ENSNGAG00000018636) #10	Rfwd3 (ENSNGAG00000000472) #11	Glg1 (ENSNGAG00000019316) #13	Pdpr (ENSNGAG00000012025) #14	Clec18a (ENSNGAG00000006371) #16	Aars (ENSNGAG00000003676) #18	Ddx19b (ENSNGAG00000018025) #21	Ddx19a (ENSNGAG00000019362) #25	St3gal2 (ENSNGAG00000010623) #26
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746
Northern American deer mouse	MODERN SPECIES	18	Bcar1 (ENSPEMG00000001868)	Ctrb1 (ENSPEMG00000012391)	Zfp1 (ENSPEMG00000027686)	Ldhd (ENSPEMG00000011279)	Znrf1 (ENSPEMG00000016826) #7	Wdr59 (ENSPEMG00000017222) #8	Fa2h (ENSPEMG00000014966) #9	Mlkl (ENSPEMG00000015662) #10	Rfwd3 (ENSPEMG00000017293) #11	Glg1 (ENSPEMG00000007698) #13	Pdpr (ENSPEMG00000009714) #14	Clec18a (ENSPEMG00000013615) #16	ENSPEMG00000015563	Aars (ENSPEMG00000010864) #18	ENSPEMG00000028725	Ddx19b (ENSPEMG00000008683) #21	ENSPEMG00000030117	Ddx19a (ENSPEMG00000004043) #25	St3gal2 (ENSPEMG00000025846) #26	Fcsk (ENSPEMG00000010443) #27	Cog4 (ENSPEMG00000018002) #28	Sf3b3 (ENSPEMG00000008603) #29	Il34 (ENSPEMG00000015570) #30	Mtss2 (ENSPEMG00000017103) #31	Vac14 (ENSPEMG00000007163) #32	Hydin (ENSPEMG00000017860) #36	ENSPEMG00000026038	Cmtr2 (ENSPEMG00000015578)	Calb2 (ENSPEMG00000017745) #37	Tle7 (ENSPEMG00000009194)	ENSPEMG00000009468
Prairie vole	MODERN SPECIES	12	Bcar1 (ENSMOCG00000009928)	Ctrb1 (ENSMOCG00000001435)	Zfp1 (ENSMOCG00000002761)	Ldhd (ENSMOCG00000022757)	Znrf1 (ENSMOCG00000013325) #7	Wdr59 (ENSMOCG00000002685) #8	Fa2h (ENSMOCG00000000805) #9	ENSMOCG00000007184	Mlkl (ENSMOCG00000011266) #10	Rfwd3 (ENSMOCG00000022178) #11	Glg1 (ENSMOCG00000016266) #13	Pdpr (ENSMOCG00000022134) #14	Clec18a (ENSMOCG00000018614) #16	Exosc6 (ENSMOCG00000003020) #17	Aars (ENSMOCG00000005336) #18	Ddx19b (ENSMOCG00000007627) #21	Ddx19a (ENSMOCG00000017220) #25	St3gal2 (ENSMOCG00000018546) #26	Fcsk (ENSMOCG00000003610) #27	Cog4 (ENSMOCG00000020120) #28	Sf3b3 (ENSMOCG00000006108) #29	Il34 (ENSMOCG00000007333) #30	Mtss2 (ENSMOCG00000016655) #31	Vac14 (ENSMOCG00000022173) #32	Hydin (ENSMOCG00000012796) #36	Cmtr2 (ENSMOCG00000000828)	Calb2 (ENSMOCG00000015513) #37	Tle7 (ENSMOCG00000021470)	ENSMOCG00000000735	Zfp612 (ENSMOCG00000000684)	Tat (ENSMOCG00000009410)
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746
Chinese hamster chok1gshd	MODERN SPECIES	112	Bcar1 (ENSCGRG00001002469)	Ctrb1 (ENSCGRG00001009962)	Dph3 (ENSCGRG00001009461)	Zfp1 (ENSCGRG00001010967)	Ldhd (ENSCGRG00001019430)	Znrf1 (ENSCGRG00001022179) #7	Wdr59 (ENSCGRG00001016673) #8	Fa2h (ENSCGRG00001000708) #9	Mlkl (ENSCGRG00001014734) #10	Rfwd3 (ENSCGRG00001023818) #11	Glg1 (ENSCGRG00001018933) #13	Pdpr (ENSCGRG00001021291) #14	Clec18a (ENSCGRG00001018618) #16	Exosc6 (ENSCGRG00001000899) #17	AARS (ENSCGRG00001014390) #18	Ddx19b (ENSCGRG00001015299) #21	St3gal2 (ENSCGRG00001019838) #26	Fcsk (ENSCGRG00001025027) #27	Cog4 (ENSCGRG00001007403) #28	Sf3b3 (ENSCGRG00001015908) #29	ENSCGRG00001000994	Il34 (ENSCGRG00001005627) #30	Mtss2 (ENSCGRG00001008250) #31	Vac14 (ENSCGRG00001003764) #32	Hydin (ENSCGRG00001020638) #36	Cmtr2 (ENSCGRG00001008188)	Calb2 (ENSCGRG00001021465) #37	Tle7 (ENSCGRG00001018163)	Zfp612 (ENSCGRG00001000845)	Chst4 (ENSCGRG00001013422)	Tat (ENSCGRG00001010175)
Murinae	ANCESTRAL SPECIES	15	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746
Mus	ANCESTRAL SPECIES	6	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746
Mus_B	ANCESTRAL SPECIES	6	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746
Steppe mouse	MODERN SPECIES	3379	Ctrb1 (ENSMSIG00000019850)	Zfp1 (ENSMSIG00000019836)	Ldhd (ENSMSIG00000019830)	Znrf1 (ENSMSIG00000019759) #7	Wdr59 (ENSMSIG00000019649) #8	Fa2h (ENSMSIG00000019619) #9	Mlkl (ENSMSIG00000019582) #10	ENSMSIG00000019575	Rfwd3 (ENSMSIG00000019554) #11	Glg1 (ENSMSIG00000019520) #13	Pdpr (ENSMSIG00000019469) #14	Clec18a (ENSMSIG00000019426) #16	Exosc6 (ENSMSIG00000019415) #17	Aars (ENSMSIG00000019384) #18	ENSMSIG00000019377	Ddx19b (ENSMSIG00000019285) #21	ENSMSIG00000019272	Ddx19a (ENSMSIG00000019234) #25	St3gal2 (ENSMSIG00000019213) #26	Fcsk (ENSMSIG00000019146) #27	Cog4 (ENSMSIG00000019065) #28	Sf3b3 (ENSMSIG00000018994) #29	Il34 (ENSMSIG00000018943) #30	Mtss2 (ENSMSIG00000018835) #31	Vac14 (ENSMSIG00000018802) #32	Hydin (ENSMSIG00000018510) #36	Cmtr2 (ENSMSIG00000018491)	ENSMSIG00000018482 #37	Tle7 (ENSMSIG00000018373)	ENSMSIG00000018357	Zfp612 (ENSMSIG00000018325)
spretus	MODERN SPECIES	17	Tmem170 (MGP_SPRETEiJ_G0032701)	Cfdp1 (MGP_SPRETEiJ_G0032700)	Bcar1 (MGP_SPRETEiJ_G0032699)	Ctrb1 (MGP_SPRETEiJ_G0032698)	Zfp1 (MGP_SPRETEiJ_G0032697)	Ldhd (MGP_SPRETEiJ_G0032696)	Znrf1 (MGP_SPRETEiJ_G0032695) #7	Wdr59 (MGP_SPRETEiJ_G0032694) #8	Fa2h (MGP_SPRETEiJ_G0032693) #9	Mlkl (MGP_SPRETEiJ_G0032692) #10	Rfwd3 (MGP_SPRETEiJ_G0032691) #11	Glg1 (MGP_SPRETEiJ_G0032690) #13	Pdpr (MGP_SPRETEiJ_G0032689) #14	MGP_SPRETEiJ_G0032688 #16	MGP_SPRETEiJ_G0032687	MGP_SPRETEiJ_G0032686 #21	MGP_SPRETEiJ_G0032685 #25	St3gal2 (MGP_SPRETEiJ_G0032684) #26	Fcsk (MGP_SPRETEiJ_G0032683) #27	Cog4 (MGP_SPRETEiJ_G0032682) #28	Sf3b3 (MGP_SPRETEiJ_G0032681) #29	MGP_SPRETEiJ_G0032680 #30	Mtss2 (MGP_SPRETEiJ_G0032679) #31	Vac14 (MGP_SPRETEiJ_G0032678) #32	MGP_SPRETEiJ_G0032677 #36	Cmtr2 (MGP_SPRETEiJ_G0032676)	Calb2 (MGP_SPRETEiJ_G0032675) #37	MGP_SPRETEiJ_G0032674	MGP_SPRETEiJ_G0032673	Zfp612 (MGP_SPRETEiJ_G0032672)	Chst4 (MGP_SPRETEiJ_G0032671)
Mouse	MODERN SPECIES	17	Cfdp1 (ENSMUSG00000031954)	Bcar1 (ENSMUSG00000031955)	Ctrb1 (ENSMUSG00000031957)	Zfp1 (ENSMUSG00000055835)	Ldhd (ENSMUSG00000031958)	Znrf1 (ENSMUSG00000033545) #7	Wdr59 (ENSMUSG00000031959) #8	Fa2h (ENSMUSG00000033579) #9	Mlkl (ENSMUSG00000012519) #10	Rfwd3 (ENSMUSG00000033596) #11	Glg1 (ENSMUSG00000003316) #13	Pdpr (ENSMUSG00000033624) #14	Clec18a (ENSMUSG00000033633) #16	Exosc6 (ENSMUSG00000109941) #17	Aars (ENSMUSG00000031960) #18	Ddx19b (ENSMUSG00000033658) #21	Ddx19a (ENSMUSG00000015023) #25	St3gal2 (ENSMUSG00000031749) #26	Fcsk (ENSMUSG00000033703) #27	Cog4 (ENSMUSG00000031753) #28	Sf3b3 (ENSMUSG00000033732) #29	Il34 (ENSMUSG00000031750) #30	Mtss2 (ENSMUSG00000033763) #31	Vac14 (ENSMUSG00000010936) #32	Hydin (ENSMUSG00000059854) #36	Cmtr2 (ENSMUSG00000046441)	Calb2 (ENSMUSG00000003657) #37	Tle7 (ENSMUSG00000095941)	Zfp612 (ENSMUSG00000044676)	Chst4 (ENSMUSG00000035930)	Tat (ENSMUSG00000001670)
Ryukyu mouse	MODERN SPECIES	17	Tmem170 (MGP_CAROLIEiJ_G0031583)	Cfdp1 (MGP_CAROLIEiJ_G0031582)	Bcar1 (MGP_CAROLIEiJ_G0031581)	Ctrb1 (MGP_CAROLIEiJ_G0031580)	Zfp1 (MGP_CAROLIEiJ_G0031579)	Ldhd (MGP_CAROLIEiJ_G0031578)	Znrf1 (MGP_CAROLIEiJ_G0031577) #7	Wdr59 (MGP_CAROLIEiJ_G0031576) #8	Fa2h (MGP_CAROLIEiJ_G0031575) #9	MGP_CAROLIEiJ_G0031574	Rfwd3 (MGP_CAROLIEiJ_G0031573) #11	Glg1 (MGP_CAROLIEiJ_G0031572) #13	Pdpr (MGP_CAROLIEiJ_G0031571) #14	Clec18a (MGP_CAROLIEiJ_G0031570) #16	MGP_CAROLIEiJ_G0031569	Ddx19b (MGP_CAROLIEiJ_G0031568) #21	Ddx19a (MGP_CAROLIEiJ_G0031567) #25	St3gal2 (MGP_CAROLIEiJ_G0031566) #26	Fcsk (MGP_CAROLIEiJ_G0031565) #27	Cog4 (MGP_CAROLIEiJ_G0031564) #28	Sf3b3 (MGP_CAROLIEiJ_G0031563) #29	Il34 (MGP_CAROLIEiJ_G0031562) #30	Mtss2 (MGP_CAROLIEiJ_G0031561) #31	Vac14 (MGP_CAROLIEiJ_G0031560) #32	Hydin (MGP_CAROLIEiJ_G0031559) #36	Cmtr2 (MGP_CAROLIEiJ_G0031558)	Calb2 (MGP_CAROLIEiJ_G0031557) #37	MGP_CAROLIEiJ_G0031556	MGP_CAROLIEiJ_G0031555	Zfp612 (MGP_CAROLIEiJ_G0031554)	Chst4 (MGP_CAROLIEiJ_G0031553)
Rat	MODERN SPECIES	10	Ctrb1 (ENSRNOG00000019068)	Zfp1 (ENSRNOG00000019059)	Ldhd (ENSRNOG00000019036)	Znrf1 (ENSRNOG00000019028) #7	LOC120098629 (ENSRNOG00000033224)	Wdr59 (ENSRNOG00000018967) #8	Fa2h (ENSRNOG00000018950) #9	Mlkl (ENSRNOG00000042353) #10	Rfwd3 (ENSRNOG00000051461) #11	Glg1 (ENSRNOG00000018668) #13	ENSRNOG00000066493	Pdpr (ENSRNOG00000022593) #14	Clec18a (ENSRNOG00000022721) #16	Exosc6 (ENSRNOG00000018582) #17	Aars1 (ENSRNOG00000018404) #18	Ddx19b (ENSRNOG00000064019) #21	Ddx19a (ENSRNOG00000018033) #25	St3gal2 (ENSRNOG00000017932) #26	Fcsk (ENSRNOG00000059453) #27	Cog4 (ENSRNOG00000017745) #28	Sf3b3 (ENSRNOG00000017724) #29	AABR07058423.3 (ENSRNOG00000051265)	Il34 (ENSRNOG00000017602) #30	Mtss2 (ENSRNOG00000017500) #31	Vac14 (ENSRNOG00000017219) #32	Hydin (ENSRNOG00000017178) #36	Cmtr2 (ENSRNOG00000017102)	Calb2 (ENSRNOG00000016977) #37	Tle7 (ENSRNOG00000038741)	Gm17720 (ENSRNOG00000062604)	Zfp612 (ENSRNOG00000016971)
Primates	ANCESTRAL SPECIES	21	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352
Strepsirrhini	ANCESTRAL SPECIES	17	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377
Lemuriformes	ANCESTRAL SPECIES	31	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377
Mouse lemur	MODERN SPECIES	12	ENSMICG00000013553	ENSMICG00000030987	ZFP1 (ENSMICG00000015124)	LDHD (ENSMICG00000009466)	ZNRF1 (ENSMICG00000046133) #7	WDR59 (ENSMICG00000012260) #8	FA2H (ENSMICG00000012250) #9	MLKL (ENSMICG00000012237) #10	RFWD3 (ENSMICG00000016400) #11	GLG1 (ENSMICG00000016371) #13	PDPR (ENSMICG00000012215) #14	ENSMICG00000000254 #16	EXOSC6 (ENSMICG00000027202) #17	AARS1 (ENSMICG00000000255) #18	ENSMICG00000000260	DDX19B (ENSMICG00000046042) #21	DDX19A (ENSMICG00000000259) #25	ST3GAL2 (ENSMICG00000033147) #26	FCSK (ENSMICG00000001338) #27	COG4 (ENSMICG00000001352) #28	SF3B3 (ENSMICG00000001363) #29	IL34 (ENSMICG00000043442) #30	MTSS2 (ENSMICG00000001380) #31	VAC14 (ENSMICG00000001393) #32	HYDIN (ENSMICG00000033742) #36	CALB2 (ENSMICG00000001876) #37	TLE7 (ENSMICG00000046469)	ZNF23 (ENSMICG00000001881)	CHST4 (ENSMICG00000042768)	ZNF19 (ENSMICG00000001886)	TAT (ENSMICG00000001890)
Lemuriformes_a	ANCESTRAL SPECIES	29	ENSGT00940000153216.a.a.c.b.q.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00970000193437	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377
Coquerels sifaka	MODERN SPECIES	229	BCAR1 (ENSPCOG00000002318)	ENSPCOG00000003933	ZFP1 (ENSPCOG00000023041)	LDHD (ENSPCOG00000019548)	ZNRF1 (ENSPCOG00000006025) #7	WDR59 (ENSPCOG00000025973) #8	FA2H (ENSPCOG00000012475) #9	MLKL (ENSPCOG00000020175) #10	RFWD3 (ENSPCOG00000022063) #11	GLG1 (ENSPCOG00000013469) #13	ENSPCOG00000011409	PDPR (ENSPCOG00000020819) #14	ENSPCOG00000023979 #16	AARS1 (ENSPCOG00000016630) #18	ENSPCOG00000019813	DDX19B (ENSPCOG00000021652) #21	ENSPCOG00000018325	DDX19A (ENSPCOG00000015782) #25	ST3GAL2 (ENSPCOG00000022065) #26	FCSK (ENSPCOG00000027743) #27	COG4 (ENSPCOG00000020809) #28	ENSPCOG00000018838	SF3B3 (ENSPCOG00000026582) #29	ENSPCOG00000022877 #30	MTSS2 (ENSPCOG00000023787) #31	VAC14 (ENSPCOG00000025988) #32	HYDIN (ENSPCOG00000025212) #36	CALB2 (ENSPCOG00000027905) #37
Bushbaby	DUPLICATION
Bushbaby	MODERN SPECIES	162	BCAR1 (ENSOGAG00000033394)	ENSOGAG00000002020	ENSOGAG00000002023	ZFP1 (ENSOGAG00000001902)	LDHD (ENSOGAG00000027100)	ZNRF1 (ENSOGAG00000032150) #7	WDR59 (ENSOGAG00000003864) #8	FA2H (ENSOGAG00000003861) #9	MLKL (ENSOGAG00000003859) #10	RFWD3 (ENSOGAG00000013944) #11	GLG1 (ENSOGAG00000013942) #13	PDPR (ENSOGAG00000010226) #14	ENSOGAG00000003395 #16	EXOSC6 (ENSOGAG00000034381) #17	AARS1 (ENSOGAG00000011601) #18	DDX19B (ENSOGAG00000011783) #21	ST3GAL2 (ENSOGAG00000011790) #26	FCSK (ENSOGAG00000016043) #27	COG4 (ENSOGAG00000016048) #28	SF3B3 (ENSOGAG00000016051) #29	IL34 (ENSOGAG00000000060) #30	MTSS2 (ENSOGAG00000025002) #31	VAC14 (ENSOGAG00000000061) #32	ENSOGAG00000000062 #36	ENSOGAG00000000064 #36	ENSOGAG00000000065 #36	CMTR2 (ENSOGAG00000030619)	CALB2 (ENSOGAG00000010318) #37	ENSOGAG00000031836	ZNF23 (ENSOGAG00000002834)	CHST4 (ENSOGAG00000002840)
Bushbaby	MODERN SPECIES	161	CYB5D1 (ENSOGAG00000027927)	CHD3 (ENSOGAG00000003216)	ENSOGAG00000003219	KCNAB3 (ENSOGAG00000008025)	TRAPPC1 (ENSOGAG00000032218)	CNTROB (ENSOGAG00000034061)	GUCY2D (ENSOGAG00000001946)	ALOX15B (ENSOGAG00000001949)	ENSOGAG00000029335	ALOX12B (ENSOGAG00000001954)	ALOXE3 (ENSOGAG00000001959)	HES7 (ENSOGAG00000026608)	PER1 (ENSOGAG00000026695)	VAMP2 (ENSOGAG00000001961)	TMEM107 (ENSOGAG00000029496)	ENSOGAG00000001962 #21	BORCS6 (ENSOGAG00000031088)	AURKB (ENSOGAG00000001967)	CTC1 (ENSOGAG00000001969)	PFAS (ENSOGAG00000034615)	RANGRF (ENSOGAG00000016343)	SLC25A35 (ENSOGAG00000027268)	ARHGEF15 (ENSOGAG00000016350)	ODF4 (ENSOGAG00000007916)	ENSOGAG00000017070	RNF222 (ENSOGAG00000012514)	NDEL1 (ENSOGAG00000009754)	MYH10 (ENSOGAG00000009761)	CCDC42 (ENSOGAG00000001554)	MFSD6L (ENSOGAG00000026901)	PIK3R6 (ENSOGAG00000007749)
Haplorrhini	ANCESTRAL SPECIES	21	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Tarsier	MODERN SPECIES	5338													PDPR (ENSTSYG00000026167) #14	ENSTSYG00000037288 #16	AARS (ENSTSYG00000010987) #18	DDX19B (ENSTSYG00000012432) #21	ENSTSYG00000026404	ST3GAL2 (ENSTSYG00000036421) #26	FCSK (ENSTSYG00000012102) #27	COG4 (ENSTSYG00000012130) #28	SF3B3 (ENSTSYG00000007910) #29	IL34 (ENSTSYG00000031506) #30	MTSS2 (ENSTSYG00000032885) #31
Simiiformes	ANCESTRAL SPECIES	21	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.b	ENSGT00940000154417.a.b #21	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Platyrrhini	ANCESTRAL SPECIES	21	ENSGT00950000183008.a.b.c	ENSGT00940000153216.a.a.c.b.q.a.h	ENSGT00940000153216.a.a.c.b.q.a.g	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000164150	ENSGT00970000193437.a.a	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.b	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b
Mas night monkey	MODERN SPECIES	630	ENSANAG00000022975	LDHD (ENSANAG00000033346)	ENSANAG00000035557	ENSANAG00000022349	ZNRF1 (ENSANAG00000019472) #7	WDR59 (ENSANAG00000031417) #8	FA2H (ENSANAG00000033023) #9	MLKL (ENSANAG00000029430) #10	RFWD3 (ENSANAG00000024636) #11	GLG1 (ENSANAG00000032078) #13	PDPR (ENSANAG00000037015) #14	ENSANAG00000024531 #16	EXOSC6 (ENSANAG00000009362) #17	AARS1 (ENSANAG00000029082) #18	ENSANAG00000025981	DDX19B (ENSANAG00000028844) #21	ENSANAG00000037769	DDX19A (ENSANAG00000023580) #25	ST3GAL2 (ENSANAG00000036071) #26	FCSK (ENSANAG00000025413) #27	COG4 (ENSANAG00000033182) #28	SF3B3 (ENSANAG00000028001) #29	ENSANAG00000031734	IL34 (ENSANAG00000020829) #30	MTSS2 (ENSANAG00000029749) #31	VAC14 (ENSANAG00000035555) #32	HYDIN (ENSANAG00000017843) #36	CMTR2 (ENSANAG00000019323)	CALB2 (ENSANAG00000028283) #37	TLE7 (ENSANAG00000026986)	ZNF23 (ENSANAG00000023821)
Cebidae	ANCESTRAL SPECIES	21	ENSGT00950000183008.a.b.c	ENSGT00940000153216.a.a.c.b.q.a.h	ENSGT00940000153216.a.a.c.b.q.a.g	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.b	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Cebidae_a	ANCESTRAL SPECIES	37	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.b	ENSGT00940000154417.a.b #21	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000156704	ENSGT00950000183102.A.b.b	ENSGT00940000159841
Capuchin	MODERN SPECIES	575										GLG1 (ENSCCAG00000024185) #13	PDPR (ENSCCAG00000026948) #14	ENSCCAG00000034752 #16	AARS (ENSCCAG00000001818) #18	ENSCCAG00000037040	ENSCCAG00000031082	DDX19B (ENSCCAG00000032896) #21	ST3GAL2 (ENSCCAG00000023124) #26	FCSK (ENSCCAG00000037899) #27	COG4 (ENSCCAG00000036455) #28	SF3B3 (ENSCCAG00000017736) #29	IL34 (ENSCCAG00000022841) #30	MTSS2 (ENSCCAG00000024233) #31	VAC14 (ENSCCAG00000028728) #32	ENSCCAG00000028282 #36
Marmoset	MODERN SPECIES	12	ZFP1 (ENSCJAG00000051567)	ENSCJAG00000038259	LDHD (ENSCJAG00000014356)	ZNRF1 (ENSCJAG00000014378) #7	ENSCJAG00000080280	WDR59 (ENSCJAG00000014399) #8	ENSCJAG00000034776	FA2H (ENSCJAG00000014444) #9	RFWD3 (ENSCJAG00000014460) #11	ENSCJAG00000022066	GLG1 (ENSCJAG00000014476) #13	PDPR (ENSCJAG00000014501) #14	ENSCJAG00000014539 #16	EXOSC6 (ENSCJAG00000014559) #17	AARS1 (ENSCJAG00000014562) #18	DDX19B (ENSCJAG00000056923) #21	ST3GAL2 (ENSCJAG00000014673) #26	FCSK (ENSCJAG00000014678) #27	COG4 (ENSCJAG00000014699) #28	SF3B3 (ENSCJAG00000014773) #29	IL34 (ENSCJAG00000014830) #30	MTSS2 (ENSCJAG00000014831) #31	VAC14 (ENSCJAG00000014847) #32	HYDIN (ENSCJAG00000014875) #36	CMTR2 (ENSCJAG00000022068)	CALB2 (ENSCJAG00000014962) #37	TLE7 (ENSCJAG00000047002)	ZNF23 (ENSCJAG00000014972)	ZNF19 (ENSCJAG00000042743)	ENSCJAG00000081725	CHST4 (ENSCJAG00000022069)
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437.a.b	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Gibbon	MODERN SPECIES	11	PPP2CA (ENSNLEG00000034485)	ENSNLEG00000008051	ENSNLEG00000008042	VDAC1 (ENSNLEG00000008023)	C5orf15 (ENSNLEG00000008019)	FSTL4 (ENSNLEG00000008014)	FA2H (ENSNLEG00000008010) #9	MLKL (ENSNLEG00000008006) #10	RFWD3 (ENSNLEG00000008003) #11	GLG1 (ENSNLEG00000007991) #13	PDPR (ENSNLEG00000007974) #14	ENSNLEG00000030977	ENSNLEG00000035597	ENSNLEG00000013877 #16	ENSNLEG00000027423 #18	DDX19B (ENSNLEG00000029325) #21	ENSNLEG00000034963	DDX19A (ENSNLEG00000016042) #25	ENSNLEG00000029991	ST3GAL2 (ENSNLEG00000031196) #26	FCSK (ENSNLEG00000016111) #27	COG4 (ENSNLEG00000016124) #28	SF3B3 (ENSNLEG00000016127) #29	IL34 (ENSNLEG00000016145) #30	MTSS2 (ENSNLEG00000016152) #31	VAC14 (ENSNLEG00000016161) #32	HYDIN (ENSNLEG00000016191) #36	ENSNLEG00000016234 #37	TLE7 (ENSNLEG00000005803)	ZNF23 (ENSNLEG00000005799)	ZNF19 (ENSNLEG00000005791)
Hominidae	ANCESTRAL SPECIES	9	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a.c	ENSGT00940000153216.a.a.c.b.q.a.d	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Orangutan	MODERN SPECIES	7	BCAR1 (ENSPPYG00000007559)	CTRB1 (ENSPPYG00000007558)	CTRB2 (ENSPPYG00000007557)	ZFP1 (ENSPPYG00000007556)	LDHD (ENSPPYG00000007555)	ZNRF1 (ENSPPYG00000041236) #7	WDR59 (ENSPPYG00000007553) #8	FA2H (ENSPPYG00000007552) #9	MLKL (ENSPPYG00000007551) #10	RFWD3 (ENSPPYG00000007550) #11	GLG1 (ENSPPYG00000007548) #13	PDPR (ENSPPYG00000007547) #14	ENSPPYG00000007546 #16	EXOSC6 (ENSPPYG00000007545) #17	AARS1 (ENSPPYG00000007544) #18	DDX19A (ENSPPYG00000007543) #21	ST3GAL2 (ENSPPYG00000007542) #26	FCSK (ENSPPYG00000007541) #27	COG4 (ENSPPYG00000007540) #28	SF3B3 (ENSPPYG00000007539) #29	IL34 (ENSPPYG00000039296) #30	MTSS2 (ENSPPYG00000007536) #31	ENSPPYG00000033730	VAC14 (ENSPPYG00000007534) #32	HYDIN (ENSPPYG00000007533) #36	CMTR2 (ENSPPYG00000007532)	CALB2 (ENSPPYG00000029672) #37	TLE7 (ENSPPYG00000036331)	ZNF23 (ENSPPYG00000007531)	ZNF19 (ENSPPYG00000007530)	CHST4 (ENSPPYG00000007529)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00940000157319	ENSGT00390000018698	ENSGT00390000015893	ENSGT00950000182971.A.d.n.a	ENSGT00390000010961	ENSGT00940000158316	ENSGT00940000155584	ENSGT00940000155213	ENSGT00940000159150	ENSGT00390000015857.m.a	ENSGT00940000160726	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Gorilla	MODERN SPECIES	7	COG8 (ENSGGOG00000007741)	NIP7 (ENSGGOG00000022785)	TMED6 (ENSGGOG00000007753)	TERF2 (ENSGGOG00000004372)	CYB5B (ENSGGOG00000015031)	NFAT5 (ENSGGOG00000006817)	NQO1 (ENSGGOG00000003294)	NOB1 (ENSGGOG00000025456)	ENSGGOG00000036327	WWP2 (ENSGGOG00000004167)	ENSGGOG00000024801 #16	ENSGGOG00000022908	ENSGGOG00000009314 #14	ENSGGOG00000009747 #16	AARS (ENSGGOG00000008737) #18	DDX19B (ENSGGOG00000036768) #21	ENSGGOG00000040420	DDX19A (ENSGGOG00000008816) #25	ENSGGOG00000037732	ST3GAL2 (ENSGGOG00000008822) #26	FCSK (ENSGGOG00000005949) #27	COG4 (ENSGGOG00000005952) #28	SF3B3 (ENSGGOG00000003246) #29	IL34 (ENSGGOG00000013065) #30	MTSS2 (ENSGGOG00000013069) #31	VAC14 (ENSGGOG00000013079) #32	HYDIN (ENSGGOG00000013091) #36	CALB2 (ENSGGOG00000017027) #37	TLE7 (ENSGGOG00000027068)	ZNF23 (ENSGGOG00000015579)	ZNF19 (ENSGGOG00000009654)
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00940000157319	ENSGT00390000018698	ENSGT00390000015893	ENSGT00950000182971.A.d.n.a	ENSGT00390000010961	ENSGT00940000158316	ENSGT00940000155584	ENSGT00940000155213	ENSGT00940000159150	ENSGT00390000015857.m.a	ENSGT00940000160726	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Human	MODERN SPECIES	7	ENSG00000272617	ENSG00000260371	NIP7 (ENSG00000132603)	TMED6 (ENSG00000157315)	TERF2 (ENSG00000132604)	CYB5B (ENSG00000103018)	NFAT5 (ENSG00000102908)	NQO1 (ENSG00000181019)	NOB1 (ENSG00000141101)	WWP2 (ENSG00000198373)	CLEC18A (ENSG00000157322) #16	PDPR (ENSG00000090857) #14	CLEC18C (ENSG00000157335) #16	EXOSC6 (ENSG00000223496) #17	AARS1 (ENSG00000090861) #18	DDX19B (ENSG00000157349) #21	ENSG00000260537	DDX19A (ENSG00000168872) #25	ST3GAL2 (ENSG00000157350) #26	FCSK (ENSG00000157353) #27	COG4 (ENSG00000103051) #28	SF3B3 (ENSG00000189091) #29	IL34 (ENSG00000157368) #30	MTSS2 (ENSG00000132613) #31	VAC14 (ENSG00000103043) #32	HYDIN (ENSG00000157423) #36	CMTR2 (ENSG00000180917)	CALB2 (ENSG00000172137) #37	TLE7 (ENSG00000260734)	ZNF23 (ENSG00000167377)	ZNF19 (ENSG00000157429)
Pan	ANCESTRAL SPECIES	19	ENSGT00940000157319	ENSGT00390000018698	ENSGT00390000015893	ENSGT00950000182971.A.d.n.a	ENSGT00390000010961	ENSGT00940000158316	ENSGT00940000155584	ENSGT00940000155213	ENSGT00940000159150	ENSGT00390000015857.m.a	ENSGT00940000160726	ENSGT00900000141128 #16	ENSGT00390000009628.a	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278
Bonobo	MODERN SPECIES	7	UTP4 (ENSPPAG00000028245)	SNTB2 (ENSPPAG00000013743)	VPS4A (ENSPPAG00000029881)	COG8 (ENSPPAG00000008283)	PDF (ENSPPAG00000039509)	NIP7 (ENSPPAG00000000218)	TMED6 (ENSPPAG00000027976)	TERF2 (ENSPPAG00000043458)	CYB5B (ENSPPAG00000031655)	NFAT5 (ENSPPAG00000042556)	NQO1 (ENSPPAG00000033488)	NOB1 (ENSPPAG00000040257)	ENSPPAG00000041394	WWP2 (ENSPPAG00000024904)	AARS1 (ENSPPAG00000040404) #18	DDX19B (ENSPPAG00000032747) #21	ENSPPAG00000044132	DDX19A (ENSPPAG00000004913) #25	ENSPPAG00000019470	ST3GAL2 (ENSPPAG00000042167) #26	FCSK (ENSPPAG00000028024) #27	COG4 (ENSPPAG00000028917) #28	SF3B3 (ENSPPAG00000026807) #29	IL34 (ENSPPAG00000043575) #30	MTSS2 (ENSPPAG00000013648) #31	VAC14 (ENSPPAG00000028066) #32	HYDIN (ENSPPAG00000038001) #36	CALB2 (ENSPPAG00000041681) #37	TLE7 (ENSPPAG00000041643)	ZNF23 (ENSPPAG00000001288)	ZNF19 (ENSPPAG00000016077)
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00940000153216.a.a.c.b.q.a.f	ENSGT00940000153216.a.a.c.b.q.a.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437.a.b	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b
Rhinopithecus	ANCESTRAL SPECIES	79	ENSGT00940000153216.a.a.c.b.q.a.f	ENSGT00940000153216.a.a.c.b.q.a.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437.a.b.a	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.b.b	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000154517.e.b.b.a
Golden snub-nosed monkey	MODERN SPECIES	2390	BCAR1 (ENSRROG00000032051)	ENSRROG00000035286	ENSRROG00000041706	ZFP1 (ENSRROG00000042823)	LDHD (ENSRROG00000040923)	ZNRF1 (ENSRROG00000038511) #7	WDR59 (ENSRROG00000043434) #8	FA2H (ENSRROG00000033158) #9	MLKL (ENSRROG00000041835) #10	RFWD3 (ENSRROG00000041490) #11	GLG1 (ENSRROG00000034737) #13	PDPR (ENSRROG00000042224) #14	ENSRROG00000044865 #16	AARS1 (ENSRROG00000027324) #18	ENSRROG00000039672	DDX19B (ENSRROG00000037946) #21	ENSRROG00000034704	DDX19A (ENSRROG00000045305) #25	ST3GAL2 (ENSRROG00000037592) #26	FCSK (ENSRROG00000005603) #27	COG4 (ENSRROG00000040239) #28	SF3B3 (ENSRROG00000045703) #29	IL34 (ENSRROG00000034297) #30	MTSS2 (ENSRROG00000009854) #31	VAC14 (ENSRROG00000043639) #32	HYDIN (ENSRROG00000039579) #36
Black snub-nosed monkey	MODERN SPECIES	255	BCAR1 (ENSRBIG00000030766)	ENSRBIG00000028741	ENSRBIG00000043238	ZFP1 (ENSRBIG00000039257)	LDHD (ENSRBIG00000042158)	ZNRF1 (ENSRBIG00000038940) #7	WDR59 (ENSRBIG00000030730) #8	FA2H (ENSRBIG00000018133) #9	MLKL (ENSRBIG00000019557) #10	RFWD3 (ENSRBIG00000037321) #11	GLG1 (ENSRBIG00000037408) #13	PDPR (ENSRBIG00000042901) #14	ENSRBIG00000044682 #16	AARS1 (ENSRBIG00000032650) #18	EXOSC6 (ENSRBIG00000003409) #17	DDX19B (ENSRBIG00000037555) #21	ENSRBIG00000037283	ENSRBIG00000042392	ST3GAL2 (ENSRBIG00000009897) #26	FCSK (ENSRBIG00000037250) #27	COG4 (ENSRBIG00000039844) #28	SF3B3 (ENSRBIG00000021904) #29	IL34 (ENSRBIG00000034462) #30	MTSS2 (ENSRBIG00000030014) #31	VAC14 (ENSRBIG00000031397) #32	ENSRBIG00000005851	HYDIN (ENSRBIG00000028337) #36	CALB2 (ENSRBIG00000040466) #37	TLE7 (ENSRBIG00000034413)	ZNF23 (ENSRBIG00000035403)	ZNF19 (ENSRBIG00000033441)
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a.f	ENSGT00940000153216.a.a.c.b.q.a.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b
Vervet Monkey	MODERN SPECIES	24	PDP2 (ENSCSAG00000018467)	CDH16 (ENSCSAG00000004614)	RRAD (ENSCSAG00000004610)	CIAO2B (ENSCSAG00000004606)	ENSCSAG00000004603	ENSCSAG00000004599	ZNRF1 (ENSCSAG00000018468) #7	WDR59 (ENSCSAG00000004590) #8	FA2H (ENSCSAG00000004572) #9	MLKL (ENSCSAG00000004551) #10	RFWD3 (ENSCSAG00000004544) #11	GLG1 (ENSCSAG00000004537) #13	PDPR (ENSCSAG00000004514) #14	ENSCSAG00000004484 #16	AARS1 (ENSCSAG00000004476) #18	DDX19B (ENSCSAG00000004469) #21	DDX19A (ENSCSAG00000004462) #25	ST3GAL2 (ENSCSAG00000004458) #26	FCSK (ENSCSAG00000004438) #27	COG4 (ENSCSAG00000004381) #28	SF3B3 (ENSCSAG00000004371) #29	IL34 (ENSCSAG00000004362) #30	MTSS2 (ENSCSAG00000004357) #31	VAC14 (ENSCSAG00000004350) #32	HYDIN (ENSCSAG00000004329) #36	CMTR2 (ENSCSAG00000018469)	CALB2 (ENSCSAG00000004281) #37	ZNF23 (ENSCSAG00000004278)	ZNF19 (ENSCSAG00000004277)	CHST4 (ENSCSAG00000018470)	TAT (ENSCSAG00000004275)
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a.f	ENSGT00940000153216.a.a.c.b.q.a.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a.f	ENSGT00940000153216.a.a.c.b.q.a.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37
Cercopithecinae_d	ANCESTRAL SPECIES	4	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a.f	ENSGT00940000153216.a.a.c.b.q.a.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b
Sooty mangabey	MODERN SPECIES	96	ENSCATG00000029207	BCAR1 (ENSCATG00000038291)	ENSCATG00000029684	ENSCATG00000029905	ZFP1 (ENSCATG00000039477)	LDHD (ENSCATG00000031143)	ZNRF1 (ENSCATG00000032026) #7	WDR59 (ENSCATG00000033731) #8	FA2H (ENSCATG00000036526) #9	MLKL (ENSCATG00000042632) #10	RFWD3 (ENSCATG00000030708) #11	GLG1 (ENSCATG00000038618) #13	PDPR (ENSCATG00000037308) #14	ENSCATG00000035902 #16	AARS1 (ENSCATG00000032821) #18	DDX19B (ENSCATG00000040004) #21	ENSCATG00000036922	DDX19A (ENSCATG00000042567) #25	ENSCATG00000016488	ST3GAL2 (ENSCATG00000030871) #26	FCSK (ENSCATG00000037116) #27	COG4 (ENSCATG00000039133) #28	SF3B3 (ENSCATG00000036562) #29	IL34 (ENSCATG00000031170) #30	MTSS2 (ENSCATG00000034025) #31	VAC14 (ENSCATG00000037184) #32	HYDIN (ENSCATG00000038202) #36	CALB2 (ENSCATG00000038501) #37	TLE7 (ENSCATG00000037920)	ZNF23 (ENSCATG00000038169)	ZNF19 (ENSCATG00000031355)
Macaca	ANCESTRAL SPECIES	8	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a.f	ENSGT00940000153216.a.a.c.b.q.a.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385.cb #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a.f	ENSGT00940000153216.a.a.c.b.q.a.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385.cb #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278
Crab-eating macaque	MODERN SPECIES	12	ENSMFAG00000036811	ZFP1 (ENSMFAG00000001812)	LDHD (ENSMFAG00000029402)	ZNRF1 (ENSMFAG00000039290) #7	WDR59 (ENSMFAG00000036379) #8	ENSMFAG00000048436	ENSMFAG00000063248	FA2H (ENSMFAG00000026134) #9	MLKL (ENSMFAG00000042010) #10	RFWD3 (ENSMFAG00000043003) #11	ENSMFAG00000047386	GLG1 (ENSMFAG00000020124) #13	PDPR (ENSMFAG00000044314) #14	ENSMFAG00000006545 #16	AARS1 (ENSMFAG00000002309) #18	DDX19B (ENSMFAG00000030922) #21	ST3GAL2 (ENSMFAG00000033155) #26	FCSK (ENSMFAG00000036078) #27	COG4 (ENSMFAG00000032596) #28	SF3B3 (ENSMFAG00000045487) #29	IL34 (ENSMFAG00000004902) #30	MTSS2 (ENSMFAG00000003097) #31	ENSMFAG00000060882	VAC14 (ENSMFAG00000040036) #32	HYDIN (ENSMFAG00000002730) #36	CMTR2 (ENSMFAG00000001058)	CALB2 (ENSMFAG00000045637) #37	TLE7 (ENSMFAG00000030917)	ZNF23 (ENSMFAG00000028694)	CHST4 (ENSMFAG00000062514)	ZNF19 (ENSMFAG00000040094)
Pig-tailed macaque	MODERN SPECIES	178	CFDP1 (ENSMNEG00000043347)	BCAR1 (ENSMNEG00000035896)	ENSMNEG00000041082	ENSMNEG00000032297	ZFP1 (ENSMNEG00000041941)	LDHD (ENSMNEG00000042696)	ZNRF1 (ENSMNEG00000038044) #7	ENSMNEG00000044401 #8	FA2H (ENSMNEG00000036186) #9	MLKL (ENSMNEG00000042632) #10	RFWD3 (ENSMNEG00000027067) #11	GLG1 (ENSMNEG00000037171) #13	PDPR (ENSMNEG00000025756) #14	ENSMNEG00000028332 #16	AARS1 (ENSMNEG00000014902) #18	DDX19B (ENSMNEG00000043684) #21	ENSMNEG00000030650	ENSMNEG00000040748	ST3GAL2 (ENSMNEG00000042149) #26	FCSK (ENSMNEG00000043191) #27	COG4 (ENSMNEG00000032102) #28	SF3B3 (ENSMNEG00000033385) #29	IL34 (ENSMNEG00000005062) #30	MTSS2 (ENSMNEG00000043277) #31	VAC14 (ENSMNEG00000042022) #32	ENSMNEG00000040729	HYDIN (ENSMNEG00000029763) #36	CALB2 (ENSMNEG00000039061) #37	TLE7 (ENSMNEG00000027661)	ZNF23 (ENSMNEG00000037222)	ZNF19 (ENSMNEG00000030393)
Atlantogenata	ANCESTRAL SPECIES	63	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Xenarthra	ANCESTRAL SPECIES	154											ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00940000154417.a.b #21	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Armadillo	MODERN SPECIES	3298											PDPR (ENSDNOG00000025191) #14	ENSDNOG00000037828 #16	EXOSC6 (ENSDNOG00000032035) #17	AARS1 (ENSDNOG00000004586) #18	ENSDNOG00000031619	DDX19B (ENSDNOG00000033029) #21	ST3GAL2 (ENSDNOG00000010688) #26	FCSK (ENSDNOG00000017518) #27	COG4 (ENSDNOG00000002650) #28	SF3B3 (ENSDNOG00000043626) #29	ENSDNOG00000031039	IL34 (ENSDNOG00000036039) #30	MTSS2 (ENSDNOG00000048249) #31	ENSDNOG00000035949 #32
Afrotheria	ANCESTRAL SPECIES	74	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095.o.a.a #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b	ENSGT00940000159841
Afrotheria_a	ANCESTRAL SPECIES	73	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095.o.a.a #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b	ENSGT00940000159841
Elephant	MODERN SPECIES	419	CFDP1 (ENSLAFG00000008461)	BCAR1 (ENSLAFG00000030093)	ENSLAFG00000003127	ENSLAFG00000003128	ZFP1 (ENSLAFG00000003125)	LDHD (ENSLAFG00000002352)	ZNRF1 (ENSLAFG00000022801) #7	WDR59 (ENSLAFG00000023216) #8	FA2H (ENSLAFG00000004266) #9	ENSLAFG00000031897	RFWD3 (ENSLAFG00000001941) #11	GLG1 (ENSLAFG00000015390) #13	PDPR (ENSLAFG00000012857) #14	ENSLAFG00000029900 #16	AARS1 (ENSLAFG00000006645) #18	DDX19B (ENSLAFG00000006651) #21	DDX19A (ENSLAFG00000006659) #25	ST3GAL2 (ENSLAFG00000006664) #26	FCSK (ENSLAFG00000006667) #27	COG4 (ENSLAFG00000006676) #28	SF3B3 (ENSLAFG00000012219) #29	IL34 (ENSLAFG00000009192) #30	MTSS2 (ENSLAFG00000009196) #31	VAC14 (ENSLAFG00000009207) #32	HYDIN (ENSLAFG00000007569) #36	CMTR2 (ENSLAFG00000008334)	CALB2 (ENSLAFG00000021888) #37	ENSLAFG00000030273	CHST4 (ENSLAFG00000010092)	TAT (ENSLAFG00000007152)	MARVELD3 (ENSLAFG00000026764)
Hyrax	MODERN SPECIES	5230																ENSPCAG00000014309 #21	ENSPCAG00000014381 #26
Platypus	DUPLICATION
Platypus	MODERN SPECIES	16	NADK (ENSOANG00000006377)	GNB1 (ENSOANG00000006378)	ENSOANG00000041654	CFAP74 (ENSOANG00000048215)	GABRD (ENSOANG00000050225)	PRKCZ (ENSOANG00000010041)	SKI (ENSOANG00000010922)	ENSOANG00000043085	RER1 (ENSOANG00000007034)	PEX10 (ENSOANG00000041204)	PLCH2 (ENSOANG00000012775)	ENSOANG00000007006	PANK4 (ENSOANG00000002947)	ENSOANG00000038720	ENSOANG00000042519	DDX19B (ENSOANG00000007568) #21	ENSOANG00000041607	PLA2G2F (ENSOANG00000005208)	ENSOANG00000029118	ENSOANG00000040867	ENSOANG00000012127	ENSOANG00000043228	PLA2G2E (ENSOANG00000015167)	OTUD3 (ENSOANG00000005446)	ENSOANG00000045977	TMCO4 (ENSOANG00000015339)	ENSOANG00000015340	NBL1 (ENSOANG00000041470)	MICOS10 (ENSOANG00000015342)	CAPZB (ENSOANG00000015343)	SLC66A1 (ENSOANG00000015344)
Platypus	MODERN SPECIES	16	RAP1GAP (ENSOANG00000005926)	ALPL (ENSOANG00000043949)	ECE1 (ENSOANG00000014757)	EIF4G3 (ENSOANG00000012444)	HP1BP3 (ENSOANG00000004341)	SH2D5 (ENSOANG00000038889)	KIF17 (ENSOANG00000004731)	DDOST (ENSOANG00000041094)	PINK1 (ENSOANG00000010400)	CDA (ENSOANG00000037717)	FAM43B (ENSOANG00000000596)	ENSOANG00000044151	MUL1 (ENSOANG00000046135)	CAMK2N1 (ENSOANG00000040741)	VWA5B1 (ENSOANG00000015183)	ENSOANG00000049966 #21	CDK7 (ENSOANG00000001543)	ENSOANG00000042726	MMEL1 (ENSOANG00000019803)	ENSOANG00000007655	ENSOANG00000015993	ACTRT2 (ENSOANG00000006693)	ENSOANG00000038134	PRDM16 (ENSOANG00000048561)	ARHGEF16 (ENSOANG00000040785)	MEGF6 (ENSOANG00000014412)	TPRG1L (ENSOANG00000009741)	WRAP73 (ENSOANG00000009742)	TP73 (ENSOANG00000048923)	ENSOANG00000041141	ENSOANG00000049548
Mammalia	ANCESTRAL SPECIES	246															ENSGT00970000193437	ENSGT00940000154417.a.a #25
Theria	ANCESTRAL SPECIES	180															ENSGT00970000193437	ENSGT00940000154417.a.a #25
Eutheria	ANCESTRAL SPECIES	19	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01100000264053 #19	ENSGT00970000193437	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b	ENSGT00940000159841
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00970000193437	ENSGT00940000154417.a.a #25	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00970000193437	ENSGT00940000154417.a.a #25	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377
Tree shrew	MODERN SPECIES	8446																ENSTBEG00000009816 #25
Glires	ANCESTRAL SPECIES	6	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT01100000264521	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352
Lagomorpha	ANCESTRAL SPECIES	19	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.b.b	ENSGT00940000153216.a.a.c.b.q.b.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT01100000264521	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000163278	ENSGT00940000162746	ENSGT00940000156704
Rabbit	MODERN SPECIES	16	ENSOCUG00000024901	ENSOCUG00000012429	ZFP1 (ENSOCUG00000001924)	LDHD (ENSOCUG00000001913)	ZNRF1 (ENSOCUG00000023442) #7	WDR59 (ENSOCUG00000011087) #8	FA2H (ENSOCUG00000030940) #9	RFWD3 (ENSOCUG00000009152) #11	GLG1 (ENSOCUG00000003425) #13	PDPR (ENSOCUG00000005470) #14	ENSOCUG00000001761 #16	AARS1 (ENSOCUG00000008872) #18	ENSOCUG00000030085	DDX19B (ENSOCUG00000004095) #21	ENSOCUG00000030722	DDX19A (ENSOCUG00000038134) #25	ST3GAL2 (ENSOCUG00000004107) #26	ENSOCUG00000024306	FCSK (ENSOCUG00000004115) #27	COG4 (ENSOCUG00000004130) #28	SF3B3 (ENSOCUG00000004139) #29	IL34 (ENSOCUG00000022125) #30	MTSS2 (ENSOCUG00000015113) #31	VAC14 (ENSOCUG00000021280) #32	HYDIN (ENSOCUG00000011895) #36	ENSOCUG00000022443	CMTR2 (ENSOCUG00000010218)	CALB2 (ENSOCUG00000015619) #37	TLE7 (ENSOCUG00000024140)	ENSOCUG00000038742	ENSOCUG00000036631
Pika	MODERN SPECIES	2467													ENSOPRG00000003337 #16	AARS1 (ENSOPRG00000003373) #18	DDX19B (ENSOPRG00000003423) #21	DDX19A (ENSOPRG00000003451) #25	ST3GAL2 (ENSOPRG00000003481) #26
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT01100000264521	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT01100000264521	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000162746
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000264521	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Marmotini	ANCESTRAL SPECIES	17	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT01100000264521	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00530000063506.B.p
Alpin marmot	MODERN SPECIES	43	ENSMMMG00000012747	ENSMMMG00000012754	ZFP1 (ENSMMMG00000012774)	LDHD (ENSMMMG00000012779)	ZNRF1 (ENSMMMG00000012822) #7	WDR59 (ENSMMMG00000012840) #8	FA2H (ENSMMMG00000012925) #9	MLKL (ENSMMMG00000012932) #10	RFWD3 (ENSMMMG00000012944) #11	GLG1 (ENSMMMG00000013000) #13	ENSMMMG00000013049 #15	PDPR (ENSMMMG00000013052) #14	ENSMMMG00000013087 #16	AARS1 (ENSMMMG00000013100) #18	DDX19B (ENSMMMG00000013116) #21	DDX19A (ENSMMMG00000013166) #25	ENSMMMG00000013185	ST3GAL2 (ENSMMMG00000013190) #26	FCSK (ENSMMMG00000013204) #27	COG4 (ENSMMMG00000013279) #28	SF3B3 (ENSMMMG00000013300) #29	IL34 (ENSMMMG00000013345) #30	VAC14 (ENSMMMG00000013378) #32	ENSMMMG00000013413 #36	CMTR2 (ENSMMMG00000013435)	CALB2 (ENSMMMG00000013442) #37	TLE7 (ENSMMMG00000013498)	ENSMMMG00000013523	ENSMMMG00000013530	ENSMMMG00000013533	CHST4 (ENSMMMG00000013537)
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000264521	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00530000063506.B.p	ENSGT00940000156704
Squirrel	MODERN SPECIES	75	BCAR1 (ENSSTOG00000004102)	ENSSTOG00000004080	ZFP1 (ENSSTOG00000022317)	LDHD (ENSSTOG00000006254)	ZNRF1 (ENSSTOG00000026020) #7	WDR59 (ENSSTOG00000010240) #8	FA2H (ENSSTOG00000010231) #9	MLKL (ENSSTOG00000010220) #10	RFWD3 (ENSSTOG00000010196) #11	GLG1 (ENSSTOG00000010174) #13	PDPR (ENSSTOG00000009422) #14	ENSSTOG00000010164 #16	EXOSC6 (ENSSTOG00000006849) #17	AARS1 (ENSSTOG00000006856) #18	DDX19B (ENSSTOG00000025733) #21	DDX19A (ENSSTOG00000006938) #25	ST3GAL2 (ENSSTOG00000006961) #26	FCSK (ENSSTOG00000006970) #27	COG4 (ENSSTOG00000007026) #28	SF3B3 (ENSSTOG00000007065) #29	IL34 (ENSSTOG00000015365) #30	MTSS2 (ENSSTOG00000022597) #31	VAC14 (ENSSTOG00000010625) #32	ENSSTOG00000032230 #36	CMTR2 (ENSSTOG00000029180)	CALB2 (ENSSTOG00000008228) #37	TLE7 (ENSSTOG00000026085)	ZNF23 (ENSSTOG00000033277)	CHST4 (ENSSTOG00000003061)	ENSSTOG00000022167	TAT (ENSSTOG00000003062)
Arctic ground squirrel	MODERN SPECIES	472	OLR1 (ENSUPAG00010003999)	TMEM52B (ENSUPAG00010003993)	GABARAPL1 (ENSUPAG00010003987)	ENSUPAG00010003966	KLRD1 (ENSUPAG00010003956)	KLRK1 (ENSUPAG00010003939)	ENSUPAG00010003932	ENSUPAG00010003892	ENSUPAG00010003885	MAGOHB (ENSUPAG00010003870)	STYK1 (ENSUPAG00010003837)	YBX3 (ENSUPAG00010003801)	TAS2R7 (ENSUPAG00010003762)	ENSUPAG00010003753	ENSUPAG00010003709	ENSUPAG00010003702 #25
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	8	BCAR1 (ENSSVLG00005018450)	ENSSVLG00005018505	ZFP1 (ENSSVLG00005018583)	LDHD (ENSSVLG00005018665)	ZNRF1 (ENSSVLG00005018778) #7	WDR59 (ENSSVLG00005018837) #8	FA2H (ENSSVLG00005018910) #9	MLKL (ENSSVLG00005018999) #10	RFWD3 (ENSSVLG00005019092) #11	GLG1 (ENSSVLG00005019575) #13	PDPR (ENSSVLG00005020293) #14	ENSSVLG00005020455 #16	EXOSC6 (ENSSVLG00005020664) #17	AARS1 (ENSSVLG00005020683) #18	ENSSVLG00005020737 #21	DDX19A (ENSSVLG00005020899) #25	ENSSVLG00005020944	ST3GAL2 (ENSSVLG00005020988) #26	FCSK (ENSSVLG00005021026) #27	COG4 (ENSSVLG00005021216) #28	SF3B3 (ENSSVLG00005021597) #29	ENSSVLG00005021652 #30	MTSS2 (ENSSVLG00005021695) #31	VAC14 (ENSSVLG00005021756) #32	HYDIN (ENSSVLG00005021881) #36	ENSSVLG00005022799	ENSSVLG00005022847	CMTR2 (ENSSVLG00005022862)	CALB2 (ENSSVLG00005022894) #37	TLE7 (ENSSVLG00005023018)	ENSSVLG00005023073
Eurasian red squirrel	MODERN SPECIES	4	ENSSVLG00005019341	TPGS2 (ENSSVLG00005019531)	KIAA1328 (ENSSVLG00005019689)	CELF4 (ENSSVLG00005019912)	PIK3C3 (ENSSVLG00005020640)	ENSSVLG00005020916	RIT2 (ENSSVLG00005020975)	SYT4 (ENSSVLG00005021147)	ENSSVLG00005015263	SETBP1 (ENSSVLG00005015356)	ENSSVLG00005015418	SLC14A1 (ENSSVLG00005015590)	SIGLEC15 (ENSSVLG00005015863)	EPG5 (ENSSVLG00005015968)	PSTPIP2 (ENSSVLG00005016011)	ENSSVLG00005016239 #25	ATP5F1A (ENSSVLG00005016277)	HAUS1 (ENSSVLG00005016339)	C18orf25 (ENSSVLG00005016394)	RNF165 (ENSSVLG00005016476)	LOXHD1 (ENSSVLG00005016724)	ST8SIA5 (ENSSVLG00005018346)	ENSSVLG00005018588	KATNAL2 (ENSSVLG00005018737)	ENSSVLG00005019019	HDHD2 (ENSSVLG00005019073)	ENSSVLG00005019150	SKOR2 (ENSSVLG00005019180)	ENSSVLG00005019379	ZBTB7C (ENSSVLG00005019433)	CTIF (ENSSVLG00005019619)
Hystricomorpha	ANCESTRAL SPECIES	22	ENSGT00940000153216.a.a.c.b.r.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704
Naked mole-rat female	MODERN SPECIES	26	ZFP1 (ENSHGLG00000032691)	LDHD (ENSHGLG00000016453)	ZNRF1 (ENSHGLG00000014332) #7	WDR59 (ENSHGLG00000010982) #8	FA2H (ENSHGLG00000011447) #9	RFWD3 (ENSHGLG00000012627) #11	GLG1 (ENSHGLG00000013832) #13	ENSHGLG00000048099	ENSHGLG00000012857 #14	ENSHGLG00000014294 #16	EXOSC6 (ENSHGLG00000021313) #17	AARS1 (ENSHGLG00000011756) #18	ENSHGLG00000032318	DDX19B (ENSHGLG00000009955) #21	ENSHGLG00000036535	DDX19A (ENSHGLG00000011681) #25	ST3GAL2 (ENSHGLG00000044574) #26	FCSK (ENSHGLG00000012100) #27	COG4 (ENSHGLG00000019190) #28	SF3B3 (ENSHGLG00000010135) #29	IL34 (ENSHGLG00000012281) #30	MTSS1L (ENSHGLG00000046719) #31	VAC14 (ENSHGLG00000009916) #32	HYDIN (ENSHGLG00000032026) #36	ENSHGLG00000014406	ENSHGLG00000042715	CMTR2 (ENSHGLG00000013565)	CALB2 (ENSHGLG00000017124) #37	ENSHGLG00000038201	TLE7 (ENSHGLG00000011868)	ENSHGLG00000046687
Hystricomorpha_a	ANCESTRAL SPECIES	22	ENSGT00940000153216.a.a.c.b.r.f	ENSGT00940000153216.a.a.c.b.r.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Hystricomorpha_b	ANCESTRAL SPECIES	15	ENSGT00940000153216.a.a.c.b.r.f	ENSGT00940000153216.a.a.c.b.r.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Long-tailed chinchilla	MODERN SPECIES	191	ENSCLAG00000003968	ZFP1 (ENSCLAG00000004223)	LDHD (ENSCLAG00000006210)	ZNRF1 (ENSCLAG00000006646) #7	WDR59 (ENSCLAG00000008773) #8	FA2H (ENSCLAG00000004239) #9	ENSCLAG00000004307	ENSCLAG00000004718 #10	RFWD3 (ENSCLAG00000003735) #11	GLG1 (ENSCLAG00000004578) #13	PDPR (ENSCLAG00000003939) #14	ENSCLAG00000003813 #16	EXOSC6 (ENSCLAG00000004121) #17	AARS1 (ENSCLAG00000004366) #18	DDX19B (ENSCLAG00000005224) #21	DDX19A (ENSCLAG00000004996) #25	ST3GAL2 (ENSCLAG00000005263) #26	FCSK (ENSCLAG00000005770) #27	COG4 (ENSCLAG00000006686) #28	SF3B3 (ENSCLAG00000003921) #29	IL34 (ENSCLAG00000003136) #30	MTSS2 (ENSCLAG00000003423) #31	VAC14 (ENSCLAG00000003905) #32	HYDIN (ENSCLAG00000012219) #36	CMTR2 (ENSCLAG00000008920)	CALB2 (ENSCLAG00000004773) #37	TLE7 (ENSCLAG00000005771)	ENSCLAG00000005991	ZNF23 (ENSCLAG00000006028)	CHST4 (ENSCLAG00000017669)	TAT (ENSCLAG00000003256)
Degu	MODERN SPECIES	52	ENSODEG00000014533	ZFP1 (ENSODEG00000014404)	LDHD (ENSODEG00000013403)	ENSODEG00000013782 #7	WDR59 (ENSODEG00000014115) #8	FA2H (ENSODEG00000015464) #9	ENSODEG00000013539	RFWD3 (ENSODEG00000013462) #11	GLG1 (ENSODEG00000014011) #13	PDPR (ENSODEG00000014206) #14	ENSODEG00000020359	ENSODEG00000014787 #16	EXOSC6 (ENSODEG00000020448) #17	ENSODEG00000014435 #18	DDX19B (ENSODEG00000014050) #21	DDX19A (ENSODEG00000014238) #25	ST3GAL2 (ENSODEG00000013892) #26	ENSODEG00000020190	FCSK (ENSODEG00000014046) #27	ENSODEG00000014686 #28	SF3B3 (ENSODEG00000014154) #29	IL34 (ENSODEG00000014364) #30	MTSS2 (ENSODEG00000013647) #31	VAC14 (ENSODEG00000014293) #32	ENSODEG00000014323 #36	ENSODEG00000014592 #37	ENSODEG00000014032	ENSODEG00000014851	TAT (ENSODEG00000014121)	ENSODEG00000014262	PHLPP2 (ENSODEG00000014074)
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Kangaroo rat	MODERN SPECIES	337	Tmem170 (ENSDORG00000023426)	Cfdp1 (ENSDORG00000006329)	Bcar1 (ENSDORG00000006327)	Ctrb1 (ENSDORG00000006317)	Zfp1 (ENSDORG00000011934)	Ldhd (ENSDORG00000011933)	Znrf1 (ENSDORG00000011928) #7	Wdr59 (ENSDORG00000004163) #8	Fa2h (ENSDORG00000023167) #9	Rfwd3 (ENSDORG00000007727) #11	Glg1 (ENSDORG00000007724) #13	Pdpr (ENSDORG00000004105) #14	Clec18a (ENSDORG00000004108) #16	Aars (ENSDORG00000004110) #18	Ddx19b (ENSDORG00000004421) #21	Ddx19a (ENSDORG00000002078) #25	St3gal2 (ENSDORG00000025194) #26	Fcsk (ENSDORG00000014055) #27	Cog4 (ENSDORG00000014062) #28	Sf3b3 (ENSDORG00000014176) #29	Il34 (ENSDORG00000009844) #30	Mtss2 (ENSDORG00000011119) #31	Vac14 (ENSDORG00000011122) #32	ENSDORG00000023244 #36	Cmtr2 (ENSDORG00000025105)	Calb2 (ENSDORG00000016045) #37	Tle7 (ENSDORG00000023639)	Zfp612 (ENSDORG00000011582)	Chst4 (ENSDORG00000002830)	Tat (ENSDORG00000002831)	Marveld3 (ENSDORG00000005833)
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Muroidea	ANCESTRAL SPECIES	19	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	1299										Ifnb1 (ENSNGAG00000018797)	Hacd4 (ENSNGAG00000022599)	Focad (ENSNGAG00000014774)	Mllt3 (ENSNGAG00000011123)	ENSNGAG00000006130	Slc24a2 (ENSNGAG00000014040)	ENSNGAG00000022308 #25	Acer2 (ENSNGAG00000017022)	Rps6 (ENSNGAG00000018864)	Dennd4c (ENSNGAG00000013102)	Plin2 (ENSNGAG00000013288)	Haus6 (ENSNGAG00000019193)	Rraga (ENSNGAG00000007602)	Saxo1 (ENSNGAG00000022334)	ENSNGAG00000022954	ENSNGAG00000019233
Upper Galilee mountains blind mole rat	MODERN SPECIES	1825	Cfdp1 (ENSNGAG00000018342)	Bcar1 (ENSNGAG00000004088)	Ctrb1 (ENSNGAG00000010514)	Zfp1 (ENSNGAG00000016319)	Ldhd (ENSNGAG00000014589)	Znrf1 (ENSNGAG00000017540) #7	Wdr59 (ENSNGAG00000012451) #8	Fa2h (ENSNGAG00000017992) #9	Mlkl (ENSNGAG00000018636) #10	Rfwd3 (ENSNGAG00000000472) #11	Glg1 (ENSNGAG00000019316) #13	Pdpr (ENSNGAG00000012025) #14	Clec18a (ENSNGAG00000006371) #16	Aars (ENSNGAG00000003676) #18	Ddx19b (ENSNGAG00000018025) #21	Ddx19a (ENSNGAG00000019362) #25	St3gal2 (ENSNGAG00000010623) #26
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Northern American deer mouse	MODERN SPECIES	18	Zfp1 (ENSPEMG00000027686)	Ldhd (ENSPEMG00000011279)	Znrf1 (ENSPEMG00000016826) #7	Wdr59 (ENSPEMG00000017222) #8	Fa2h (ENSPEMG00000014966) #9	Mlkl (ENSPEMG00000015662) #10	Rfwd3 (ENSPEMG00000017293) #11	Glg1 (ENSPEMG00000007698) #13	Pdpr (ENSPEMG00000009714) #14	Clec18a (ENSPEMG00000013615) #16	ENSPEMG00000015563	Aars (ENSPEMG00000010864) #18	ENSPEMG00000028725	Ddx19b (ENSPEMG00000008683) #21	ENSPEMG00000030117	Ddx19a (ENSPEMG00000004043) #25	St3gal2 (ENSPEMG00000025846) #26	Fcsk (ENSPEMG00000010443) #27	Cog4 (ENSPEMG00000018002) #28	Sf3b3 (ENSPEMG00000008603) #29	Il34 (ENSPEMG00000015570) #30	Mtss2 (ENSPEMG00000017103) #31	Vac14 (ENSPEMG00000007163) #32	Hydin (ENSPEMG00000017860) #36	ENSPEMG00000026038	Cmtr2 (ENSPEMG00000015578)	Calb2 (ENSPEMG00000017745) #37	Tle7 (ENSPEMG00000009194)	ENSPEMG00000009468	Zfp612 (ENSPEMG00000013228)	ENSPEMG00000027545
Prairie vole	MODERN SPECIES	12	Ctrb1 (ENSMOCG00000001435)	Zfp1 (ENSMOCG00000002761)	Ldhd (ENSMOCG00000022757)	Znrf1 (ENSMOCG00000013325) #7	Wdr59 (ENSMOCG00000002685) #8	Fa2h (ENSMOCG00000000805) #9	ENSMOCG00000007184	Mlkl (ENSMOCG00000011266) #10	Rfwd3 (ENSMOCG00000022178) #11	Glg1 (ENSMOCG00000016266) #13	Pdpr (ENSMOCG00000022134) #14	Clec18a (ENSMOCG00000018614) #16	Exosc6 (ENSMOCG00000003020) #17	Aars (ENSMOCG00000005336) #18	Ddx19b (ENSMOCG00000007627) #21	Ddx19a (ENSMOCG00000017220) #25	St3gal2 (ENSMOCG00000018546) #26	Fcsk (ENSMOCG00000003610) #27	Cog4 (ENSMOCG00000020120) #28	Sf3b3 (ENSMOCG00000006108) #29	Il34 (ENSMOCG00000007333) #30	Mtss2 (ENSMOCG00000016655) #31	Vac14 (ENSMOCG00000022173) #32	Hydin (ENSMOCG00000012796) #36	Cmtr2 (ENSMOCG00000000828)	Calb2 (ENSMOCG00000015513) #37	Tle7 (ENSMOCG00000021470)	ENSMOCG00000000735	Zfp612 (ENSMOCG00000000684)	Tat (ENSMOCG00000009410)	Marveld3 (ENSMOCG00000013975)
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Golden Hamster	MODERN SPECIES	654	Bcar1 (ENSMAUG00000022261)	Ctrb1 (ENSMAUG00000010188)	Zfp1 (ENSMAUG00000007745)	ENSMAUG00000020276	Ldhd (ENSMAUG00000022265)	Znrf1 (ENSMAUG00000008268) #7	Wdr59 (ENSMAUG00000013115) #8	Fa2h (ENSMAUG00000008344) #9	Mlkl (ENSMAUG00000018124) #10	Rfwd3 (ENSMAUG00000019858) #11	Glg1 (ENSMAUG00000018954) #13	Clec18a (ENSMAUG00000019711) #16	Exosc6 (ENSMAUG00000008040) #17	Aars1 (ENSMAUG00000021342) #18	ENSMAUG00000008484	ENSMAUG00000020831 #25	St3gal2 (ENSMAUG00000014142) #26	Fcsk (ENSMAUG00000021677) #27	Cog4 (ENSMAUG00000021674) #28	Sf3b3 (ENSMAUG00000013618) #29	Il34 (ENSMAUG00000017461) #30	Mtss2 (ENSMAUG00000014807) #31	Vac14 (ENSMAUG00000015801) #32	Hydin (ENSMAUG00000013961) #36	Cmtr2 (ENSMAUG00000008760)	Tat (ENSMAUG00000010472)	Marveld3 (ENSMAUG00000001115)	Phlpp2 (ENSMAUG00000018256)	Ap1g1 (ENSMAUG00000008015)	Atxn1l (ENSMAUG00000016349)	Zfp821 (ENSMAUG00000021582)
Murinae	ANCESTRAL SPECIES	15	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Rat	MODERN SPECIES	10	Zfp1 (ENSRNOG00000019059)	Ldhd (ENSRNOG00000019036)	Znrf1 (ENSRNOG00000019028) #7	LOC120098629 (ENSRNOG00000033224)	Wdr59 (ENSRNOG00000018967) #8	Fa2h (ENSRNOG00000018950) #9	Mlkl (ENSRNOG00000042353) #10	Rfwd3 (ENSRNOG00000051461) #11	Glg1 (ENSRNOG00000018668) #13	ENSRNOG00000066493	Pdpr (ENSRNOG00000022593) #14	Clec18a (ENSRNOG00000022721) #16	Exosc6 (ENSRNOG00000018582) #17	Aars1 (ENSRNOG00000018404) #18	Ddx19b (ENSRNOG00000064019) #21	Ddx19a (ENSRNOG00000018033) #25	St3gal2 (ENSRNOG00000017932) #26	Fcsk (ENSRNOG00000059453) #27	Cog4 (ENSRNOG00000017745) #28	Sf3b3 (ENSRNOG00000017724) #29	AABR07058423.3 (ENSRNOG00000051265)	Il34 (ENSRNOG00000017602) #30	Mtss2 (ENSRNOG00000017500) #31	Vac14 (ENSRNOG00000017219) #32	Hydin (ENSRNOG00000017178) #36	Cmtr2 (ENSRNOG00000017102)	Calb2 (ENSRNOG00000016977) #37	Tle7 (ENSRNOG00000038741)	Gm17720 (ENSRNOG00000062604)	Zfp612 (ENSRNOG00000016971)	Chst4 (ENSRNOG00000016953)
Mus	ANCESTRAL SPECIES	6	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Shrew mouse	MODERN SPECIES	12	Tmem170 (MGP_PahariEiJ_G0023181)	Cfdp1 (MGP_PahariEiJ_G0023180)	Bcar1 (MGP_PahariEiJ_G0023179)	Zfp1 (MGP_PahariEiJ_G0023178)	Ldhd (MGP_PahariEiJ_G0023177)	Znrf1 (MGP_PahariEiJ_G0023176) #7	Wdr59 (MGP_PahariEiJ_G0023175) #8	Fa2h (MGP_PahariEiJ_G0023174) #9	Mlkl (MGP_PahariEiJ_G0023173) #10	Rfwd3 (MGP_PahariEiJ_G0023172) #11	Glg1 (MGP_PahariEiJ_G0023171) #13	Pdpr (MGP_PahariEiJ_G0023170) #14	MGP_PahariEiJ_G0023169 #16	MGP_PahariEiJ_G0023168	MGP_PahariEiJ_G0023167	MGP_PahariEiJ_G0023166 #25	St3gal2 (MGP_PahariEiJ_G0023165) #26	Fcsk (MGP_PahariEiJ_G0023164) #27	Cog4 (MGP_PahariEiJ_G0023163) #28	Sf3b3 (MGP_PahariEiJ_G0023162) #29	Il34 (MGP_PahariEiJ_G0023161) #30	Mtss2 (MGP_PahariEiJ_G0023160) #31	Vac14 (MGP_PahariEiJ_G0023159) #32	Hydin (MGP_PahariEiJ_G0023158) #36	Cmtr2 (MGP_PahariEiJ_G0023157)	Calb2 (MGP_PahariEiJ_G0023156) #37	MGP_PahariEiJ_G0023155	MGP_PahariEiJ_G0023154	Zfp612 (MGP_PahariEiJ_G0023153)	MGP_PahariEiJ_G0023152	Tat (MGP_PahariEiJ_G0023151)
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Ryukyu mouse	MODERN SPECIES	17	Cfdp1 (MGP_CAROLIEiJ_G0031582)	Bcar1 (MGP_CAROLIEiJ_G0031581)	Ctrb1 (MGP_CAROLIEiJ_G0031580)	Zfp1 (MGP_CAROLIEiJ_G0031579)	Ldhd (MGP_CAROLIEiJ_G0031578)	Znrf1 (MGP_CAROLIEiJ_G0031577) #7	Wdr59 (MGP_CAROLIEiJ_G0031576) #8	Fa2h (MGP_CAROLIEiJ_G0031575) #9	MGP_CAROLIEiJ_G0031574	Rfwd3 (MGP_CAROLIEiJ_G0031573) #11	Glg1 (MGP_CAROLIEiJ_G0031572) #13	Pdpr (MGP_CAROLIEiJ_G0031571) #14	Clec18a (MGP_CAROLIEiJ_G0031570) #16	MGP_CAROLIEiJ_G0031569	Ddx19b (MGP_CAROLIEiJ_G0031568) #21	Ddx19a (MGP_CAROLIEiJ_G0031567) #25	St3gal2 (MGP_CAROLIEiJ_G0031566) #26	Fcsk (MGP_CAROLIEiJ_G0031565) #27	Cog4 (MGP_CAROLIEiJ_G0031564) #28	Sf3b3 (MGP_CAROLIEiJ_G0031563) #29	Il34 (MGP_CAROLIEiJ_G0031562) #30	Mtss2 (MGP_CAROLIEiJ_G0031561) #31	Vac14 (MGP_CAROLIEiJ_G0031560) #32	Hydin (MGP_CAROLIEiJ_G0031559) #36	Cmtr2 (MGP_CAROLIEiJ_G0031558)	Calb2 (MGP_CAROLIEiJ_G0031557) #37	MGP_CAROLIEiJ_G0031556	MGP_CAROLIEiJ_G0031555	Zfp612 (MGP_CAROLIEiJ_G0031554)	Chst4 (MGP_CAROLIEiJ_G0031553)	Tat (MGP_CAROLIEiJ_G0031552)
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Mouse	MODERN SPECIES	17	Bcar1 (ENSMUSG00000031955)	Ctrb1 (ENSMUSG00000031957)	Zfp1 (ENSMUSG00000055835)	Ldhd (ENSMUSG00000031958)	Znrf1 (ENSMUSG00000033545) #7	Wdr59 (ENSMUSG00000031959) #8	Fa2h (ENSMUSG00000033579) #9	Mlkl (ENSMUSG00000012519) #10	Rfwd3 (ENSMUSG00000033596) #11	Glg1 (ENSMUSG00000003316) #13	Pdpr (ENSMUSG00000033624) #14	Clec18a (ENSMUSG00000033633) #16	Exosc6 (ENSMUSG00000109941) #17	Aars (ENSMUSG00000031960) #18	Ddx19b (ENSMUSG00000033658) #21	Ddx19a (ENSMUSG00000015023) #25	St3gal2 (ENSMUSG00000031749) #26	Fcsk (ENSMUSG00000033703) #27	Cog4 (ENSMUSG00000031753) #28	Sf3b3 (ENSMUSG00000033732) #29	Il34 (ENSMUSG00000031750) #30	Mtss2 (ENSMUSG00000033763) #31	Vac14 (ENSMUSG00000010936) #32	Hydin (ENSMUSG00000059854) #36	Cmtr2 (ENSMUSG00000046441)	Calb2 (ENSMUSG00000003657) #37	Tle7 (ENSMUSG00000095941)	Zfp612 (ENSMUSG00000044676)	Chst4 (ENSMUSG00000035930)	Tat (ENSMUSG00000001670)	Marveld3 (ENSMUSG00000001672)
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Steppe mouse	MODERN SPECIES	3379	Ldhd (ENSMSIG00000019830)	Znrf1 (ENSMSIG00000019759) #7	Wdr59 (ENSMSIG00000019649) #8	Fa2h (ENSMSIG00000019619) #9	Mlkl (ENSMSIG00000019582) #10	ENSMSIG00000019575	Rfwd3 (ENSMSIG00000019554) #11	Glg1 (ENSMSIG00000019520) #13	Pdpr (ENSMSIG00000019469) #14	Clec18a (ENSMSIG00000019426) #16	Exosc6 (ENSMSIG00000019415) #17	Aars (ENSMSIG00000019384) #18	ENSMSIG00000019377	Ddx19b (ENSMSIG00000019285) #21	ENSMSIG00000019272	Ddx19a (ENSMSIG00000019234) #25	St3gal2 (ENSMSIG00000019213) #26	Fcsk (ENSMSIG00000019146) #27	Cog4 (ENSMSIG00000019065) #28	Sf3b3 (ENSMSIG00000018994) #29	Il34 (ENSMSIG00000018943) #30	Mtss2 (ENSMSIG00000018835) #31	Vac14 (ENSMSIG00000018802) #32	Hydin (ENSMSIG00000018510) #36	Cmtr2 (ENSMSIG00000018491)	ENSMSIG00000018482 #37	Tle7 (ENSMSIG00000018373)	ENSMSIG00000018357	Zfp612 (ENSMSIG00000018325)	Chst4 (ENSMSIG00000018311)	ENSMSIG00000018296
spretus	MODERN SPECIES	17	Cfdp1 (MGP_SPRETEiJ_G0032700)	Bcar1 (MGP_SPRETEiJ_G0032699)	Ctrb1 (MGP_SPRETEiJ_G0032698)	Zfp1 (MGP_SPRETEiJ_G0032697)	Ldhd (MGP_SPRETEiJ_G0032696)	Znrf1 (MGP_SPRETEiJ_G0032695) #7	Wdr59 (MGP_SPRETEiJ_G0032694) #8	Fa2h (MGP_SPRETEiJ_G0032693) #9	Mlkl (MGP_SPRETEiJ_G0032692) #10	Rfwd3 (MGP_SPRETEiJ_G0032691) #11	Glg1 (MGP_SPRETEiJ_G0032690) #13	Pdpr (MGP_SPRETEiJ_G0032689) #14	MGP_SPRETEiJ_G0032688 #16	MGP_SPRETEiJ_G0032687	MGP_SPRETEiJ_G0032686 #21	MGP_SPRETEiJ_G0032685 #25	St3gal2 (MGP_SPRETEiJ_G0032684) #26	Fcsk (MGP_SPRETEiJ_G0032683) #27	Cog4 (MGP_SPRETEiJ_G0032682) #28	Sf3b3 (MGP_SPRETEiJ_G0032681) #29	MGP_SPRETEiJ_G0032680 #30	Mtss2 (MGP_SPRETEiJ_G0032679) #31	Vac14 (MGP_SPRETEiJ_G0032678) #32	MGP_SPRETEiJ_G0032677 #36	Cmtr2 (MGP_SPRETEiJ_G0032676)	Calb2 (MGP_SPRETEiJ_G0032675) #37	MGP_SPRETEiJ_G0032674	MGP_SPRETEiJ_G0032673	Zfp612 (MGP_SPRETEiJ_G0032672)	Chst4 (MGP_SPRETEiJ_G0032671)	Tat (MGP_SPRETEiJ_G0032670)
Primates	ANCESTRAL SPECIES	21	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Strepsirrhini	ANCESTRAL SPECIES	17	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Lemuriformes	ANCESTRAL SPECIES	31	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Lemuriformes_a	ANCESTRAL SPECIES	29	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00970000193437	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Coquerels sifaka	MODERN SPECIES	229	ZFP1 (ENSPCOG00000023041)	LDHD (ENSPCOG00000019548)	ZNRF1 (ENSPCOG00000006025) #7	WDR59 (ENSPCOG00000025973) #8	FA2H (ENSPCOG00000012475) #9	MLKL (ENSPCOG00000020175) #10	RFWD3 (ENSPCOG00000022063) #11	GLG1 (ENSPCOG00000013469) #13	ENSPCOG00000011409	PDPR (ENSPCOG00000020819) #14	ENSPCOG00000023979 #16	AARS1 (ENSPCOG00000016630) #18	ENSPCOG00000019813	DDX19B (ENSPCOG00000021652) #21	ENSPCOG00000018325	DDX19A (ENSPCOG00000015782) #25	ST3GAL2 (ENSPCOG00000022065) #26	FCSK (ENSPCOG00000027743) #27	COG4 (ENSPCOG00000020809) #28	ENSPCOG00000018838	SF3B3 (ENSPCOG00000026582) #29	ENSPCOG00000022877 #30	MTSS2 (ENSPCOG00000023787) #31	VAC14 (ENSPCOG00000025988) #32	HYDIN (ENSPCOG00000025212) #36	CALB2 (ENSPCOG00000027905) #37
Mouse lemur	MODERN SPECIES	12	ENSMICG00000030987	ZFP1 (ENSMICG00000015124)	LDHD (ENSMICG00000009466)	ZNRF1 (ENSMICG00000046133) #7	WDR59 (ENSMICG00000012260) #8	FA2H (ENSMICG00000012250) #9	MLKL (ENSMICG00000012237) #10	RFWD3 (ENSMICG00000016400) #11	GLG1 (ENSMICG00000016371) #13	PDPR (ENSMICG00000012215) #14	ENSMICG00000000254 #16	EXOSC6 (ENSMICG00000027202) #17	AARS1 (ENSMICG00000000255) #18	ENSMICG00000000260	DDX19B (ENSMICG00000046042) #21	DDX19A (ENSMICG00000000259) #25	ST3GAL2 (ENSMICG00000033147) #26	FCSK (ENSMICG00000001338) #27	COG4 (ENSMICG00000001352) #28	SF3B3 (ENSMICG00000001363) #29	IL34 (ENSMICG00000043442) #30	MTSS2 (ENSMICG00000001380) #31	VAC14 (ENSMICG00000001393) #32	HYDIN (ENSMICG00000033742) #36	CALB2 (ENSMICG00000001876) #37	TLE7 (ENSMICG00000046469)	ZNF23 (ENSMICG00000001881)	CHST4 (ENSMICG00000042768)	ZNF19 (ENSMICG00000001886)	TAT (ENSMICG00000001890)	MARVELD3 (ENSMICG00000045631)
Haplorrhini	ANCESTRAL SPECIES	21	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746	ENSGT00940000156704
Tarsier	MODERN SPECIES	6330																DDX19A (ENSTSYG00000025817) #25	ENSTSYG00000033742	ENSTSYG00000029081
Simiiformes	ANCESTRAL SPECIES	21	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.b	ENSGT00940000154417.a.b #21	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437.a.b	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00940000153216.a.a.c.b.q.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Gibbon	MODERN SPECIES	11	ENSNLEG00000008042	VDAC1 (ENSNLEG00000008023)	C5orf15 (ENSNLEG00000008019)	FSTL4 (ENSNLEG00000008014)	FA2H (ENSNLEG00000008010) #9	MLKL (ENSNLEG00000008006) #10	RFWD3 (ENSNLEG00000008003) #11	GLG1 (ENSNLEG00000007991) #13	PDPR (ENSNLEG00000007974) #14	ENSNLEG00000030977	ENSNLEG00000035597	ENSNLEG00000013877 #16	ENSNLEG00000027423 #18	DDX19B (ENSNLEG00000029325) #21	ENSNLEG00000034963	DDX19A (ENSNLEG00000016042) #25	ENSNLEG00000029991	ST3GAL2 (ENSNLEG00000031196) #26	FCSK (ENSNLEG00000016111) #27	COG4 (ENSNLEG00000016124) #28	SF3B3 (ENSNLEG00000016127) #29	IL34 (ENSNLEG00000016145) #30	MTSS2 (ENSNLEG00000016152) #31	VAC14 (ENSNLEG00000016161) #32	HYDIN (ENSNLEG00000016191) #36	ENSNLEG00000016234 #37	TLE7 (ENSNLEG00000005803)	ZNF23 (ENSNLEG00000005799)	ZNF19 (ENSNLEG00000005791)	TAT (ENSNLEG00000005777)	ENSNLEG00000027098
Hominidae	ANCESTRAL SPECIES	9	ENSGT00940000153216.a.a.c.b.q.a.d	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00390000015893	ENSGT00950000182971.A.d.n.a	ENSGT00390000010961	ENSGT00940000158316	ENSGT00940000155584	ENSGT00940000155213	ENSGT00940000159150	ENSGT00390000015857.m.a	ENSGT00940000160726	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Gorilla	MODERN SPECIES	7	TMED6 (ENSGGOG00000007753)	TERF2 (ENSGGOG00000004372)	CYB5B (ENSGGOG00000015031)	NFAT5 (ENSGGOG00000006817)	NQO1 (ENSGGOG00000003294)	NOB1 (ENSGGOG00000025456)	ENSGGOG00000036327	WWP2 (ENSGGOG00000004167)	ENSGGOG00000024801 #16	ENSGGOG00000022908	ENSGGOG00000009314 #14	ENSGGOG00000009747 #16	AARS (ENSGGOG00000008737) #18	DDX19B (ENSGGOG00000036768) #21	ENSGGOG00000040420	DDX19A (ENSGGOG00000008816) #25	ENSGGOG00000037732	ST3GAL2 (ENSGGOG00000008822) #26	FCSK (ENSGGOG00000005949) #27	COG4 (ENSGGOG00000005952) #28	SF3B3 (ENSGGOG00000003246) #29	IL34 (ENSGGOG00000013065) #30	MTSS2 (ENSGGOG00000013069) #31	VAC14 (ENSGGOG00000013079) #32	HYDIN (ENSGGOG00000013091) #36	CALB2 (ENSGGOG00000017027) #37	TLE7 (ENSGGOG00000027068)	ZNF23 (ENSGGOG00000015579)	ZNF19 (ENSGGOG00000009654)	CHST4 (ENSGGOG00000015794)	TAT (ENSGGOG00000004693)
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00390000015893	ENSGT00950000182971.A.d.n.a	ENSGT00390000010961	ENSGT00940000158316	ENSGT00940000155584	ENSGT00940000155213	ENSGT00940000159150	ENSGT00390000015857.m.a	ENSGT00940000160726	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Human	MODERN SPECIES	7	NIP7 (ENSG00000132603)	TMED6 (ENSG00000157315)	TERF2 (ENSG00000132604)	CYB5B (ENSG00000103018)	NFAT5 (ENSG00000102908)	NQO1 (ENSG00000181019)	NOB1 (ENSG00000141101)	WWP2 (ENSG00000198373)	CLEC18A (ENSG00000157322) #16	PDPR (ENSG00000090857) #14	CLEC18C (ENSG00000157335) #16	EXOSC6 (ENSG00000223496) #17	AARS1 (ENSG00000090861) #18	DDX19B (ENSG00000157349) #21	ENSG00000260537	DDX19A (ENSG00000168872) #25	ST3GAL2 (ENSG00000157350) #26	FCSK (ENSG00000157353) #27	COG4 (ENSG00000103051) #28	SF3B3 (ENSG00000189091) #29	IL34 (ENSG00000157368) #30	MTSS2 (ENSG00000132613) #31	VAC14 (ENSG00000103043) #32	HYDIN (ENSG00000157423) #36	CMTR2 (ENSG00000180917)	CALB2 (ENSG00000172137) #37	TLE7 (ENSG00000260734)	ZNF23 (ENSG00000167377)	ZNF19 (ENSG00000157429)	CHST4 (ENSG00000140835)	TAT (ENSG00000198650)
Pan	ANCESTRAL SPECIES	19	ENSGT00390000015893	ENSGT00950000182971.A.d.n.a	ENSGT00390000010961	ENSGT00940000158316	ENSGT00940000155584	ENSGT00940000155213	ENSGT00940000159150	ENSGT00390000015857.m.a	ENSGT00940000160726	ENSGT00900000141128 #16	ENSGT00390000009628.a	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746	ENSGT00940000156704
Bonobo	MODERN SPECIES	7	VPS4A (ENSPPAG00000029881)	COG8 (ENSPPAG00000008283)	PDF (ENSPPAG00000039509)	NIP7 (ENSPPAG00000000218)	TMED6 (ENSPPAG00000027976)	TERF2 (ENSPPAG00000043458)	CYB5B (ENSPPAG00000031655)	NFAT5 (ENSPPAG00000042556)	NQO1 (ENSPPAG00000033488)	NOB1 (ENSPPAG00000040257)	ENSPPAG00000041394	WWP2 (ENSPPAG00000024904)	AARS1 (ENSPPAG00000040404) #18	DDX19B (ENSPPAG00000032747) #21	ENSPPAG00000044132	DDX19A (ENSPPAG00000004913) #25	ENSPPAG00000019470	ST3GAL2 (ENSPPAG00000042167) #26	FCSK (ENSPPAG00000028024) #27	COG4 (ENSPPAG00000028917) #28	SF3B3 (ENSPPAG00000026807) #29	IL34 (ENSPPAG00000043575) #30	MTSS2 (ENSPPAG00000013648) #31	VAC14 (ENSPPAG00000028066) #32	HYDIN (ENSPPAG00000038001) #36	CALB2 (ENSPPAG00000041681) #37	TLE7 (ENSPPAG00000041643)	ZNF23 (ENSPPAG00000001288)	ZNF19 (ENSPPAG00000016077)	CHST4 (ENSPPAG00000033145)	TAT (ENSPPAG00000038577)
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	7	TERF2 (ENSPTRG00000008281)	CYB5B (ENSPTRG00000008282)	NFAT5 (ENSPTRG00000008283)	NQO1 (ENSPTRG00000008284)	NOB1 (ENSPTRG00000008285)	ENSPTRG00000051228	WWP2 (ENSPTRG00000008288)	ENSPTRG00000031148 #16	ENSPTRG00000046216	ENSPTRG00000050538	ENSPTRG00000046001 #15	EXOSC6 (ENSPTRG00000008296) #17	AARS1 (ENSPTRG00000008297) #18	DDX19B (ENSPTRG00000008298) #25	ENSPTRG00000045644	ENSPTRG00000008301 #25	ENSPTRG00000046184	ST3GAL2 (ENSPTRG00000052488) #26	FCSK (ENSPTRG00000008303) #27	COG4 (ENSPTRG00000008304) #28	SF3B3 (ENSPTRG00000008308) #29	IL34 (ENSPTRG00000008309) #30	MTSS2 (ENSPTRG00000008310) #31	VAC14 (ENSPTRG00000008313) #32	HYDIN (ENSPTRG00000008315) #36	ENSPTRG00000050692	CALB2 (ENSPTRG00000008320) #37	TLE7 (ENSPTRG00000045587)	ZNF23 (ENSPTRG00000008321)	ZNF19 (ENSPTRG00000008322)	CHST4 (ENSPTRG00000008323)
Chimpanzee	MODERN SPECIES	7	NIP7 (ENSPTRG00000051089)	TMED6 (ENSPTRG00000008280)	TERF2 (ENSPTRG00000008281)	CYB5B (ENSPTRG00000008282)	NFAT5 (ENSPTRG00000008283)	NQO1 (ENSPTRG00000008284)	NOB1 (ENSPTRG00000008285)	ENSPTRG00000051228	WWP2 (ENSPTRG00000008288)	ENSPTRG00000031148 #16	ENSPTRG00000046216	ENSPTRG00000050538	ENSPTRG00000046001 #15	EXOSC6 (ENSPTRG00000008296) #17	AARS1 (ENSPTRG00000008297) #18	DDX19B (ENSPTRG00000008298) #25	ENSPTRG00000045644	ENSPTRG00000008301 #25	ENSPTRG00000046184	ST3GAL2 (ENSPTRG00000052488) #26	FCSK (ENSPTRG00000008303) #27	COG4 (ENSPTRG00000008304) #28	SF3B3 (ENSPTRG00000008308) #29	IL34 (ENSPTRG00000008309) #30	MTSS2 (ENSPTRG00000008310) #31	VAC14 (ENSPTRG00000008313) #32	HYDIN (ENSPTRG00000008315) #36	ENSPTRG00000050692	CALB2 (ENSPTRG00000008320) #37	TLE7 (ENSPTRG00000045587)	ZNF23 (ENSPTRG00000008321)
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437.a.b	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278
Rhinopithecus	ANCESTRAL SPECIES	79	ENSGT00940000153216.a.a.c.b.q.a.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00970000193437.a.b.a	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.b.b	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000154517.e.b.b.a	ENSGT00940000163278
Golden snub-nosed monkey	MODERN SPECIES	2390	ENSRROG00000041706	ZFP1 (ENSRROG00000042823)	LDHD (ENSRROG00000040923)	ZNRF1 (ENSRROG00000038511) #7	WDR59 (ENSRROG00000043434) #8	FA2H (ENSRROG00000033158) #9	MLKL (ENSRROG00000041835) #10	RFWD3 (ENSRROG00000041490) #11	GLG1 (ENSRROG00000034737) #13	PDPR (ENSRROG00000042224) #14	ENSRROG00000044865 #16	AARS1 (ENSRROG00000027324) #18	ENSRROG00000039672	DDX19B (ENSRROG00000037946) #21	ENSRROG00000034704	DDX19A (ENSRROG00000045305) #25	ST3GAL2 (ENSRROG00000037592) #26	FCSK (ENSRROG00000005603) #27	COG4 (ENSRROG00000040239) #28	SF3B3 (ENSRROG00000045703) #29	IL34 (ENSRROG00000034297) #30	MTSS2 (ENSRROG00000009854) #31	VAC14 (ENSRROG00000043639) #32	HYDIN (ENSRROG00000039579) #36
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00940000153216.a.a.c.b.q.a.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278
Vervet Monkey	MODERN SPECIES	24	CDH16 (ENSCSAG00000004614)	RRAD (ENSCSAG00000004610)	CIAO2B (ENSCSAG00000004606)	ENSCSAG00000004603	ENSCSAG00000004599	ZNRF1 (ENSCSAG00000018468) #7	WDR59 (ENSCSAG00000004590) #8	FA2H (ENSCSAG00000004572) #9	MLKL (ENSCSAG00000004551) #10	RFWD3 (ENSCSAG00000004544) #11	GLG1 (ENSCSAG00000004537) #13	PDPR (ENSCSAG00000004514) #14	ENSCSAG00000004484 #16	AARS1 (ENSCSAG00000004476) #18	DDX19B (ENSCSAG00000004469) #21	DDX19A (ENSCSAG00000004462) #25	ST3GAL2 (ENSCSAG00000004458) #26	FCSK (ENSCSAG00000004438) #27	COG4 (ENSCSAG00000004381) #28	SF3B3 (ENSCSAG00000004371) #29	IL34 (ENSCSAG00000004362) #30	MTSS2 (ENSCSAG00000004357) #31	VAC14 (ENSCSAG00000004350) #32	HYDIN (ENSCSAG00000004329) #36	CMTR2 (ENSCSAG00000018469)	CALB2 (ENSCSAG00000004281) #37	ZNF23 (ENSCSAG00000004278)	ZNF19 (ENSCSAG00000004277)	CHST4 (ENSCSAG00000018470)	TAT (ENSCSAG00000004275)	MARVELD3 (ENSCSAG00000004274)
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278
Macaca	ANCESTRAL SPECIES	8	ENSGT00940000153216.a.a.c.b.q.a.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385.cb #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.a.f	ENSGT00940000153216.a.a.c.b.q.a.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385.cb #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Rhesus	MODERN SPECIES	12	BCAR1 (ENSMMUG00000002630)	ENSMMUG00000002629	CTRB2 (ENSMMUG00000029083)	ZFP1 (ENSMMUG00000011587)	LDHD (ENSMMUG00000022037)	ZNRF1 (ENSMMUG00000016245) #7	ENSMMUG00000051210	WDR59 (ENSMMUG00000023471) #8	FA2H (ENSMMUG00000008381) #9	MLKL (ENSMMUG00000008378) #10	RFWD3 (ENSMMUG00000008375) #11	GLG1 (ENSMMUG00000000226) #13	PDPR (ENSMMUG00000023147) #14	CLEC18A (ENSMMUG00000009424) #16	AARS1 (ENSMMUG00000021653) #18	ENSMMUG00000020316 #25	ST3GAL2 (ENSMMUG00000057933) #26	FCSK (ENSMMUG00000003174) #27	COG4 (ENSMMUG00000003171) #28	SF3B3 (ENSMMUG00000017812) #29	IL34 (ENSMMUG00000020415) #30	MTSS2 (ENSMMUG00000020416) #31	VAC14 (ENSMMUG00000020421) #32	HYDIN (ENSMMUG00000005805) #36	CMTR2 (ENSMMUG00000005808)	CALB2 (ENSMMUG00000008403) #37	TLE7 (ENSMMUG00000008404)	ZNF23 (ENSMMUG00000008405)	CHST4 (ENSMMUG00000061967)	ZNF19 (ENSMMUG00000008408)	TAT (ENSMMUG00000002018)
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278
Olive baboon	MODERN SPECIES	9	TMEM170A (ENSPANG00000031529)	CFDP1 (ENSPANG00000024483)	BCAR1 (ENSPANG00000016999)	ENSPANG00000024448	ENSPANG00000017998	ZFP1 (ENSPANG00000016568)	ZNRF1 (ENSPANG00000034015) #7	WDR59 (ENSPANG00000014552) #8	FA2H (ENSPANG00000000633) #9	RFWD3 (ENSPANG00000014554) #11	GLG1 (ENSPANG00000010762) #13	PDPR (ENSPANG00000007022) #14	ENSPANG00000007021 #16	EXOSC6 (ENSPANG00000003331) #17	AARS1 (ENSPANG00000020452) #18	DDX19A (ENSPANG00000033008) #25	ST3GAL2 (ENSPANG00000018763) #26	FCSK (ENSPANG00000009922) #27	COG4 (ENSPANG00000008156) #28	SF3B3 (ENSPANG00000024075) #29	ENSPANG00000041873	IL34 (ENSPANG00000045929) #30	MTSS2 (ENSPANG00000018427) #31	VAC14 (ENSPANG00000018041) #32	HYDIN (ENSPANG00000005685) #36	CMTR2 (ENSPANG00000050682)	CALB2 (ENSPANG00000016519) #37	TLE7 (ENSPANG00000029222)	ZNF23 (ENSPANG00000017859)	ZNF19 (ENSPANG00000031418)	CHST4 (ENSPANG00000005478)
Cercopithecinae_d	ANCESTRAL SPECIES	4	ENSGT00940000153216.a.a.c.b.q.a.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00970000193437.b	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.a	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00910000147300	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Drill	MODERN SPECIES	602	ENSMLEG00000036594	ZFP1 (ENSMLEG00000021950)	LDHD (ENSMLEG00000020227)	ZNRF1 (ENSMLEG00000043242) #7	WDR59 (ENSMLEG00000026701) #8	FA2H (ENSMLEG00000032038) #9	MLKL (ENSMLEG00000027994) #10	RFWD3 (ENSMLEG00000043393) #11	GLG1 (ENSMLEG00000036017) #13	PDPR (ENSMLEG00000043376) #14	ENSMLEG00000022734 #16	AARS1 (ENSMLEG00000035037) #18	ENSMLEG00000013012	ENSMLEG00000042907	ENSMLEG00000028801	DDX19A (ENSMLEG00000030395) #25	ST3GAL2 (ENSMLEG00000000767) #26	FCSK (ENSMLEG00000031685) #27	COG4 (ENSMLEG00000036803) #28	SF3B3 (ENSMLEG00000043891) #29	IL34 (ENSMLEG00000043846) #30	MTSS2 (ENSMLEG00000032544) #31	ENSMLEG00000044321	VAC14 (ENSMLEG00000042911) #32	HYDIN (ENSMLEG00000029501) #36	CALB2 (ENSMLEG00000039629) #37	TLE7 (ENSMLEG00000044319)	ZNF23 (ENSMLEG00000040603)	ZNF19 (ENSMLEG00000036284)	CHST4 (ENSMLEG00000018150)	TAT (ENSMLEG00000027145)
Sooty mangabey	MODERN SPECIES	96	ENSCATG00000029684	ENSCATG00000029905	ZFP1 (ENSCATG00000039477)	LDHD (ENSCATG00000031143)	ZNRF1 (ENSCATG00000032026) #7	WDR59 (ENSCATG00000033731) #8	FA2H (ENSCATG00000036526) #9	MLKL (ENSCATG00000042632) #10	RFWD3 (ENSCATG00000030708) #11	GLG1 (ENSCATG00000038618) #13	PDPR (ENSCATG00000037308) #14	ENSCATG00000035902 #16	AARS1 (ENSCATG00000032821) #18	DDX19B (ENSCATG00000040004) #21	ENSCATG00000036922	DDX19A (ENSCATG00000042567) #25	ENSCATG00000016488	ST3GAL2 (ENSCATG00000030871) #26	FCSK (ENSCATG00000037116) #27	COG4 (ENSCATG00000039133) #28	SF3B3 (ENSCATG00000036562) #29	IL34 (ENSCATG00000031170) #30	MTSS2 (ENSCATG00000034025) #31	VAC14 (ENSCATG00000037184) #32	HYDIN (ENSCATG00000038202) #36	CALB2 (ENSCATG00000038501) #37	TLE7 (ENSCATG00000037920)	ZNF23 (ENSCATG00000038169)	ZNF19 (ENSCATG00000031355)	CHST4 (ENSCATG00000005295)	TAT (ENSCATG00000042511)
Platyrrhini	ANCESTRAL SPECIES	21	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000164150	ENSGT00970000193437.a.a	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.b	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000156704
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	844					MORN3 (ENSANAG00000020830)	ORAI1 (ENSANAG00000036652)	ENSANAG00000024120	ENSANAG00000026949	ENSANAG00000020320	ANAPC5 (ENSANAG00000038447)	CAMKK2 (ENSANAG00000031846)	P2RX4 (ENSANAG00000027811)	P2RX7 (ENSANAG00000023576)	ENSANAG00000035687	ENSANAG00000036614	ENSANAG00000023846 #25	OASL (ENSANAG00000024063)	ENSANAG00000038481	HNF1A (ENSANAG00000020753)	SPPL3 (ENSANAG00000023007)	ENSANAG00000036744	ACADS (ENSANAG00000020561)	UNC119B (ENSANAG00000038463)	MLEC (ENSANAG00000038365)	CABP1 (ENSANAG00000024335)	POP5 (ENSANAG00000023744)	RNF10 (ENSANAG00000021356)	COQ5 (ENSANAG00000038352)	ENSANAG00000005727	SRSF9 (ENSANAG00000035910)	GATC (ENSANAG00000034389)
Mas night monkey	MODERN SPECIES	630	ENSANAG00000035557	ENSANAG00000022349	ZNRF1 (ENSANAG00000019472) #7	WDR59 (ENSANAG00000031417) #8	FA2H (ENSANAG00000033023) #9	MLKL (ENSANAG00000029430) #10	RFWD3 (ENSANAG00000024636) #11	GLG1 (ENSANAG00000032078) #13	PDPR (ENSANAG00000037015) #14	ENSANAG00000024531 #16	EXOSC6 (ENSANAG00000009362) #17	AARS1 (ENSANAG00000029082) #18	ENSANAG00000025981	DDX19B (ENSANAG00000028844) #21	ENSANAG00000037769	DDX19A (ENSANAG00000023580) #25	ST3GAL2 (ENSANAG00000036071) #26	FCSK (ENSANAG00000025413) #27	COG4 (ENSANAG00000033182) #28	SF3B3 (ENSANAG00000028001) #29	ENSANAG00000031734	IL34 (ENSANAG00000020829) #30	MTSS2 (ENSANAG00000029749) #31	VAC14 (ENSANAG00000035555) #32	HYDIN (ENSANAG00000017843) #36	CMTR2 (ENSANAG00000019323)	CALB2 (ENSANAG00000028283) #37	TLE7 (ENSANAG00000026986)	ZNF23 (ENSANAG00000023821)	ZNF19 (ENSANAG00000036944)	TAT (ENSANAG00000022303)
Cebidae	ANCESTRAL SPECIES	21	ENSGT00940000153216.a.a.c.b.q.a.g	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.b	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000156704
Cebidae_a	ANCESTRAL SPECIES	37	ENSGT00940000153216.a.a.c.b.q.a.h	ENSGT00940000153216.a.a.c.b.q.a.g	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000164150	ENSGT00940000154417.a.a #25	ENSGT00970000193437.a.b	ENSGT00940000154417.a.b #21	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000156704
Capuchin	MODERN SPECIES	434															ENSCCAG00000037824	ENSCCAG00000033497 #25	OASL (ENSCCAG00000028044)	ENSCCAG00000038122	HNF1A (ENSCCAG00000034473)	ENSCCAG00000037331	SPPL3 (ENSCCAG00000023763)	ACADS (ENSCCAG00000024502)	UNC119B (ENSCCAG00000027048)	MLEC (ENSCCAG00000024437)	CABP1 (ENSCCAG00000036173)	POP5 (ENSCCAG00000023154)	RNF10 (ENSCCAG00000025089)	COQ5 (ENSCCAG00000010621)	ENSCCAG00000020736	ENSCCAG00000036052	SRSF9 (ENSCCAG00000036053)
Bolivian squirrel monkey	MODERN SPECIES	162	ENSSBOG00000028052	ENSSBOG00000036120	ZFP1 (ENSSBOG00000020206)	LDHD (ENSSBOG00000029040)	ZNRF1 (ENSSBOG00000032209) #7	WDR59 (ENSSBOG00000020352) #8	FA2H (ENSSBOG00000031309) #9	MLKL (ENSSBOG00000027267) #10	RFWD3 (ENSSBOG00000026893) #11	GLG1 (ENSSBOG00000036264) #13	PDPR (ENSSBOG00000024653) #14	ENSSBOG00000035320 #16	EXOSC6 (ENSSBOG00000027402) #17	AARS1 (ENSSBOG00000022141) #18	ENSSBOG00000034490	DDX19A (ENSSBOG00000031482) #25	ENSSBOG00000029716	ST3GAL2 (ENSSBOG00000035352) #26	ENSSBOG00000020473	FCSK (ENSSBOG00000022951) #27	COG4 (ENSSBOG00000029479) #28	SF3B3 (ENSSBOG00000029156) #29	IL34 (ENSSBOG00000018734) #30	MTSS2 (ENSSBOG00000028964) #31	VAC14 (ENSSBOG00000028547) #32	HYDIN (ENSSBOG00000020168) #36	CALB2 (ENSSBOG00000007144) #37	TLE7 (ENSSBOG00000004053)	ZNF23 (ENSSBOG00000024458)	ZNF19 (ENSSBOG00000022120)	TAT (ENSSBOG00000031651)
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01100000263669	ENSGT00940000154417.a.a #25	ENSGT01080000257453	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154417.a.a #25
Common shrew	MODERN SPECIES	3953																ENSSARG00000001017 #25
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00940000159082.a.b ##14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.a #25	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00940000159082.a.b ##14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278.f
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746
Equus	ANCESTRAL SPECIES	20	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00740000117161.e.a.b	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278.e.a.a	ENSGT00940000162746
Horse	MODERN SPECIES	22	ZFP1 (ENSECAG00000014727)	LDHD (ENSECAG00000010322)	ZNRF1 (ENSECAG00000030990) #7	WDR59 (ENSECAG00000022834) #8	FA2H (ENSECAG00000020245) #9	MLKL (ENSECAG00000017558) #10	RFWD3 (ENSECAG00000014965) #11	ENSECAG00000035993	GLG1 (ENSECAG00000016433) #13	PDPR (ENSECAG00000023598) #14	ENSECAG00000012835 #16	EXOSC6 (ENSECAG00000039860) #17	AARS1 (ENSECAG00000008561) #18	ENSECAG00000033685	DDX19B (ENSECAG00000017635) #21	DDX19A (ENSECAG00000051660) #25	ENSECAG00000034960	ST3GAL2 (ENSECAG00000023798) #26	FCSK (ENSECAG00000012351) #27	COG4 (ENSECAG00000014431) #28	SF3B3 (ENSECAG00000014053) #29	IL34 (ENSECAG00000012327) #30	MTSS2 (ENSECAG00000000217) #31	VAC14 (ENSECAG00000012459) #32	HYDIN (ENSECAG00000012360) #36	CMTR2 (ENSECAG00000006573)	CALB2 (ENSECAG00000017208) #37	ENSECAG00000034456	ZNF23 (ENSECAG00000015829)	ZNF19 (ENSECAG00000014798)	ENSECAG00000050658
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746	ENSGT00940000156704
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746	ENSGT00940000156704
Greater horseshoe bat	MODERN SPECIES	6	ENSRFEG00010014317	ZFP1 (ENSRFEG00010014250)	LDHD (ENSRFEG00010014196)	ENSRFEG00010014113	ZNRF1 (ENSRFEG00010013998) #7	WDR59 (ENSRFEG00010013888) #8	FA2H (ENSRFEG00010013821) #9	MLKL (ENSRFEG00010013780) #10	RFWD3 (ENSRFEG00010013703) #11	GLG1 (ENSRFEG00010013142) #13	PDPR (ENSRFEG00010013064) #14	ENSRFEG00010012849 #16	EXOSC6 (ENSRFEG00010012832) #17	AARS1 (ENSRFEG00010012764) #18	DDX19B (ENSRFEG00010012475) #21	DDX19A (ENSRFEG00010012387) #25	ST3GAL2 (ENSRFEG00010012285) #26	FCSK (ENSRFEG00010012061) #27	COG4 (ENSRFEG00010011952) #28	SF3B3 (ENSRFEG00010011817) #29	IL34 (ENSRFEG00010011770) #30	MTSS2 (ENSRFEG00010011673) #31	VAC14 (ENSRFEG00010011570) #32	ENSRFEG00010011532	HYDIN (ENSRFEG00010009988) #36	CMTR2 (ENSRFEG00010009910)	CALB2 (ENSRFEG00010009864) #37	TLE7 (ENSRFEG00010009764)	ZNF23 (ENSRFEG00010009684)	ZNF19 (ENSRFEG00010009535)	CHST4 (ENSRFEG00010009513)
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1025			LDHD (ENSMLUG00000010489)	ZNRF1 (ENSMLUG00000024337) #7	WDR59 (ENSMLUG00000000584) #8	FA2H (ENSMLUG00000012806) #9	MLKL (ENSMLUG00000012797) #10	RFWD3 (ENSMLUG00000012786) #11	GLG1 (ENSMLUG00000012764) #13	ENSMLUG00000024675 ##14	ENSMLUG00000009253 ##14	ENSMLUG00000007406 #16	EXOSC6 (ENSMLUG00000023828) #17	AARS1 (ENSMLUG00000007431) #18	DDX19B (ENSMLUG00000007447) #21	ENSMLUG00000007474 #25	ST3GAL2 (ENSMLUG00000000116) #26	FCSK (ENSMLUG00000007490) #27	COG4 (ENSMLUG00000007539) #28	SF3B3 (ENSMLUG00000014607) #29	ENSMLUG00000029950 #31	VAC14 (ENSMLUG00000016155) #32	HYDIN (ENSMLUG00000016168) #36	CMTR2 (ENSMLUG00000000607)	CALB2 (ENSMLUG00000008627) #37	TLE7 (ENSMLUG00000027365)	ZNF23 (ENSMLUG00000003725)	ENSMLUG00000030681	CHST4 (ENSMLUG00000008656)	TAT (ENSMLUG00000008659)	ENSMLUG00000008690
Microbat	MODERN SPECIES	1046									B2M (ENSMLUG00000005388)	SPG11 (ENSMLUG00000005361)	EIF3J (ENSMLUG00000023600)	CTDSPL2 (ENSMLUG00000011720)	GOLM2 (ENSMLUG00000009503)	ENSMLUG00000026881	FRMD5 (ENSMLUG00000004791)	ENSMLUG00000002196 #25	WDR76 (ENSMLUG00000004781)	MFAP1 (ENSMLUG00000013000)	HYPK (ENSMLUG00000009424)	SERINC4 (ENSMLUG00000009433)	SERF2 (ENSMLUG00000024894)	ENSMLUG00000025872	ELL3 (ENSMLUG00000009401)	PDIA3 (ENSMLUG00000009380)	CATSPER2 (ENSMLUG00000009375)	STRC (ENSMLUG00000014042)	ENSMLUG00000014035	PPIP5K1 (ENSMLUG00000014016)	MAP1A (ENSMLUG00000014007)	ENSMLUG00000008972	TUBGCP4 (ENSMLUG00000008933)
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278.f
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746
Canidae	ANCESTRAL SPECIES	11	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01080000257453.g	ENSGT00940000154417.a.b #21	ENSGT01080000257453.h	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746	ENSGT00940000156704
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000166736 #15	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01080000257453.g	ENSGT00940000154417.a.b #21	ENSGT01080000257453.h	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746	ENSGT00940000156704
Dingo	MODERN SPECIES	373	LDHD (ENSCAFG00020001460)	ZNRF1 (ENSCAFG00020001414) #7	WDR59 (ENSCAFG00020001379) #8	FA2H (ENSCAFG00020001330) #9	RFWD3 (ENSCAFG00020001249) #11	ENSCAFG00020001230	GLG1 (ENSCAFG00020000344) #13	ENSCAFG00020020993 #15	PDPR (ENSCAFG00020020984) #14	ENSCAFG00020020978 #16	EXOSC6 (ENSCAFG00020020974) #17	AARS1 (ENSCAFG00020020967) #18	ENSCAFG00020020964	DDX19B (ENSCAFG00020020959) #21	ENSCAFG00020020958	DDX19A (ENSCAFG00020020954) #25	ST3GAL2 (ENSCAFG00020020951) #26	FCSK (ENSCAFG00020020940) #27	COG4 (ENSCAFG00020020932) #28	SF3B3 (ENSCAFG00020020912) #29	IL34 (ENSCAFG00020020898) #30	MTSS2 (ENSCAFG00020020896) #31	VAC14 (ENSCAFG00020020892) #32	ENSCAFG00020020877 #36	CMTR2 (ENSCAFG00020020874)	CALB2 (ENSCAFG00020020867) #37	ZNF23 (ENSCAFG00020020862)	ENSCAFG00020020856	CHST4 (ENSCAFG00020020852)	TAT (ENSCAFG00020020832)	MARVELD3 (ENSCAFG00020020828)
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746
Ursidae	ANCESTRAL SPECIES	8	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746	ENSGT00940000156704
Ursus	ANCESTRAL SPECIES	41											ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746	ENSGT00940000156704	ENSGT00940000159841
American black bear	MODERN SPECIES	381										ENSUAMG00000007010 #16	ENSUAMG00000007009 #17	AARS1 (ENSUAMG00000007008) #18	ENSUAMG00000007005	DDX19B (ENSUAMG00000006974) #21	ENSUAMG00000006971	DDX19A (ENSUAMG00000006969) #25	ST3GAL2 (ENSUAMG00000006967) #26	FCSK (ENSUAMG00000006965) #27	COG4 (ENSUAMG00000006791) #28	SF3B3 (ENSUAMG00000006780) #29	IL34 (ENSUAMG00000006776) #30	MTSS2 (ENSUAMG00000006748) #31	VAC14 (ENSUAMG00000006738) #32
Giant Panda	MODERN SPECIES	3	BCAR1 (ENSAMEG00000005499)	ENSAMEG00000005523	ENSAMEG00000024683	ZFP1 (ENSAMEG00000001261)	LDHD (ENSAMEG00000001263)	ENSAMEG00000030215 #7	WDR59 (ENSAMEG00000001279) #8	FA2H (ENSAMEG00000001310) #9	RFWD3 (ENSAMEG00000001323) #11	ENSAMEG00000001334 #13	ENSAMEG00000004778 #16	AARS1 (ENSAMEG00000004815) #18	ENSAMEG00000031350	ENSAMEG00000004879	ENSAMEG00000026029	DDX19A (ENSAMEG00000001987) #25	ST3GAL2 (ENSAMEG00000002046) #26	FCSK (ENSAMEG00000002060) #27	COG4 (ENSAMEG00000002121) #28	SF3B3 (ENSAMEG00000002187) #29	IL34 (ENSAMEG00000002226) #30	MTSS2 (ENSAMEG00000002234) #31	VAC14 (ENSAMEG00000002267) #32	HYDIN (ENSAMEG00000002304) #36	CALB2 (ENSAMEG00000002338) #37	TLE7 (ENSAMEG00000002363)	ZNF23 (ENSAMEG00000002365)	ZNF19 (ENSAMEG00000002368)	CHST4 (ENSAMEG00000002372)	TAT (ENSAMEG00000002374)	ENSAMEG00000002393
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746
Tiger	MODERN SPECIES	47												ENSPTIG00000005459 #16	AARS1 (ENSPTIG00000021477) #18	DDX19B (ENSPTIG00000000185) #21	ENSPTIG00000007090	DDX19A (ENSPTIG00000008190) #25	ENSPTIG00000010223	ST3GAL2 (ENSPTIG00000011620) #26	FCSK (ENSPTIG00000011986) #27	COG4 (ENSPTIG00000017436) #28	SF3B3 (ENSPTIG00000020382) #29	IL34 (ENSPTIG00000010087) #30	MTSS2 (ENSPTIG00000013869) #31	VAC14 (ENSPTIG00000018582) #32	HYDIN (ENSPTIG00000000797) #36	CMTR2 (ENSPTIG00000019568)	CALB2 (ENSPTIG00000020486) #37	TLE7 (ENSPTIG00000004176)	ZNF23 (ENSPTIG00000006872)	ZNF19 (ENSPTIG00000007719)	CHST4 (ENSPTIG00000001748)
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000166352	ENSGT00940000162377	ENSGT00940000163278.f	ENSGT00940000162746
leopard	MODERN SPECIES	28											ENSPPRG00000001602 #16	EXOSC6 (ENSPPRG00000021385) #17	AARS1 (ENSPPRG00000013214) #18	DDX19B (ENSPPRG00000012923) #21	ENSPPRG00000010048	DDX19A (ENSPPRG00000009999) #25	ENSPPRG00000008883	ST3GAL2 (ENSPPRG00000008166) #26	FCSK (ENSPPRG00000007362) #27	COG4 (ENSPPRG00000003206) #28	SF3B3 (ENSPPRG00000001686) #29	IL34 (ENSPPRG00000001259) #30	MTSS2 (ENSPPRG00000000123) #31	VAC14 (ENSPPRG00000023649) #32	HYDIN (ENSPPRG00000016374) #36	CMTR2 (ENSPPRG00000020552)	CALB2 (ENSPPRG00000008922) #37	TLE7 (ENSPPRG00000007407)	ZNF23 (ENSPPRG00000006925)	ZNF19 (ENSPPRG00000006028)	CHST4 (ENSPPRG00000004537)
lion	MODERN SPECIES	15	ENSPLOG00000016888	ZFP1 (ENSPLOG00000016850)	LDHD (ENSPLOG00000016677)	ZNRF1 (ENSPLOG00000016644) #7	WDR59 (ENSPLOG00000016323) #8	FA2H (ENSPLOG00000016235) #9	RFWD3 (ENSPLOG00000016195) #11	GLG1 (ENSPLOG00000015679) #13	ENSPLOG00000015593 #14	ENSPLOG00000015500 #15	ENSPLOG00000015100 #16	EXOSC6 (ENSPLOG00000015053) #17	AARS1 (ENSPLOG00000014996) #18	ENSPLOG00000014951	DDX19B (ENSPLOG00000014792) #21	ENSPLOG00000014627 #25	ST3GAL2 (ENSPLOG00000014572) #26	FCSK (ENSPLOG00000014457) #27	COG4 (ENSPLOG00000014349) #28	SF3B3 (ENSPLOG00000014278) #29	ENSPLOG00000014106 #30	MTSS2 (ENSPLOG00000013769) #31	VAC14 (ENSPLOG00000013688) #32	HYDIN (ENSPLOG00000012780) #36	CMTR2 (ENSPLOG00000012715)	CALB2 (ENSPLOG00000012534) #37	TLE7 (ENSPLOG00000012411)	ENSPLOG00000012372	ZNF23 (ENSPLOG00000012301)	ZNF19 (ENSPLOG00000012217)	ENSPLOG00000012188
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.a #25	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278
Suina	ANCESTRAL SPECIES																	ENSGT00940000154417.a.a #25
Pig	MODERN SPECIES	14	ENSSSCG00000023127	ZFP1 (ENSSSCG00000022668)	LDHD (ENSSSCG00000002712)	ZNRF1 (ENSSSCG00000031462) #7	WDR59 (ENSSSCG00000002714) #8	FA2H (ENSSSCG00000002718) #9	MLKL (ENSSSCG00000002716) #10	RFWD3 (ENSSSCG00000002715) #11	GLG1 (ENSSSCG00000030420) #13	PDPR (ENSSSCG00000002724) #14	ENSSSCG00000002720 #16	EXOSC6 (ENSSSCG00000002719) #17	AARS1 (ENSSSCG00000002723) #18	DDX19B (ENSSSCG00000002722) #21	ENSSSCG00000035447	DDX19A (ENSSSCG00000060523) #25	ENSSSCG00000037473	ST3GAL2 (ENSSSCG00000061257) #26	FCSK (ENSSSCG00000025425) #27	COG4 (ENSSSCG00000027973) #28	SF3B3 (ENSSSCG00000025323) #29	IL34 (ENSSSCG00000040629) #30	MTSS2 (ENSSSCG00000040037) #31	VAC14 (ENSSSCG00000002729) #32	ENSSSCG00000040993	ENSSSCG00000026790 #32	ENSSSCG00000040973 #36	CMTR2 (ENSSSCG00000033156)	CALB2 (ENSSSCG00000002730) #37	TLE7 (ENSSSCG00000043891)	ZNF23 (ENSSSCG00000002738)
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT01080000257453	ENSGT00940000154417.a.a #25	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.a #25	ENSGT01080000257453	ENSGT00940000154417.a.b #21	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT01080000257453.m	ENSGT00940000154417.a.a #25	ENSGT01080000257453.n	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000169858	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453.m	ENSGT00940000154417.a.a #25	ENSGT01080000257453.n.b	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000169858	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453.m	ENSGT00940000154417.a.a #25	ENSGT01080000257453.n.b	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000169858	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278
Dolphin	MODERN SPECIES	1247															DDX19B (ENSTTRG00000005800) #21	DDX19A (ENSTTRG00000005817) #25	ST3GAL2 (ENSTTRG00000005824) #26	FCSK (ENSTTRG00000005826) #27	COG4 (ENSTTRG00000005847) #28	SF3B3 (ENSTTRG00000005855) #29	IL34 (ENSTTRG00000005859) #30	MTSS2 (ENSTTRG00000005862) #31	VAC14 (ENSTTRG00000005864) #32	ENSTTRG00000005865	HYDIN (ENSTTRG00000005866) #36	CMTR2 (ENSTTRG00000005867)
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000153771.B.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453.m	ENSGT00940000154417.a.a #25	ENSGT01080000257453.n.b	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000169858	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00990000211293.b
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000153771.B.e	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00940000166736 #15	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT01080000257453.m	ENSGT00940000154417.a.a #25	ENSGT01080000257453.n.b	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00390000008294.e.a	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00990000211293.b	ENSGT00940000163278
Narwhal	MODERN SPECIES	296	ENSMMNG00015001293	ENSMMNG00015001321	ZFP1 (ENSMMNG00015001347)	LDHD (ENSMMNG00015001373)	ENSMMNG00015001402 #7	WDR59 (ENSMMNG00015001427) #8	FA2H (ENSMMNG00015001483) #9	GLG1 (ENSMMNG00015001665) #13	ENSMMNG00015001957 #14	ENSMMNG00015001989 #15	ENSMMNG00015002019 #16	EXOSC6 (ENSMMNG00015002065) #17	AARS1 (ENSMMNG00015002085) #18	DDX19B (ENSMMNG00015002151) #21	ENSMMNG00015002210	DDX19A (ENSMMNG00015002246) #25	ENSMMNG00015002313	ST3GAL2 (ENSMMNG00015002339) #26	FCSK (ENSMMNG00015002367) #27	COG4 (ENSMMNG00015002417) #28	SF3B3 (ENSMMNG00015002474) #29	IL34 (ENSMMNG00015002547) #30	MTSS2 (ENSMMNG00015002582) #31	VAC14 (ENSMMNG00015002646) #32	HYDIN (ENSMMNG00015002720) #36	ENSMMNG00015002761	CALB2 (ENSMMNG00015002778) #37	TLE7 (ENSMMNG00015002801)	ZNF23 (ENSMMNG00015002816)	ENSMMNG00015002831	ZNF19 (ENSMMNG00015002839)
Sperm whale	MODERN SPECIES	8	ENSPCTG00005012667	ENSPCTG00005012567	ZFP1 (ENSPCTG00005012501)	LDHD (ENSPCTG00005012382)	ZNRF1 (ENSPCTG00005012330) #7	WDR59 (ENSPCTG00005012274) #8	FA2H (ENSPCTG00005012173) #9	RFWD3 (ENSPCTG00005012011) #11	GLG1 (ENSPCTG00005011632) #13	PDPR (ENSPCTG00005011535) #14	ENSPCTG00005011378 #16	EXOSC6 (ENSPCTG00005011344) #17	AARS (ENSPCTG00005011237) #18	ENSPCTG00005011163	ENSPCTG00005011125	DDX19A (ENSPCTG00005010769) #25	ST3GAL2 (ENSPCTG00005010643) #26	FCSK (ENSPCTG00005010501) #27	COG4 (ENSPCTG00005010349) #28	SF3B3 (ENSPCTG00005010242) #29	IL34 (ENSPCTG00005010196) #30	MTSS2 (ENSPCTG00005010157) #31	VAC14 (ENSPCTG00005009945) #32	HYDIN (ENSPCTG00005009644) #36	CMTR2 (ENSPCTG00005009607)	ENSPCTG00005009566	ENSPCTG00005009540	ZNF23 (ENSPCTG00005009481)	ZNF19 (ENSPCTG00005009363)	CHST4 (ENSPCTG00005009223)	TAT (ENSPCTG00005009116)
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014
Bos	ANCESTRAL SPECIES	4	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014	ENSGT01100000263496.D.b.b.a.b.v	ENSGT00940000162616
Bos_a	ANCESTRAL SPECIES																	ENSGT00940000154417.a.a #25
Domestic yak	MODERN SPECIES	12	LDHD (ENSBGRG00000013722)	ENSBGRG00000014041 #7	ENSBGRG00000014175	WDR59 (ENSBGRG00000014214) #8	ENSBGRG00000014830	FA2H (ENSBGRG00000014884) #9	MLKL (ENSBGRG00000014976) #10	RFWD3 (ENSBGRG00000015135) #11	GLG1 (ENSBGRG00000015414) #13	ENSBGRG00000016521	PDPR (ENSBGRG00000016566) #14	ENSBGRG00000016784 #16	AARS1 (ENSBGRG00000017391) #18	DDX19B (ENSBGRG00000017512) #21	ENSBGRG00000017971	DDX19A (ENSBGRG00000018020) #25	ENSBGRG00000018136	ST3GAL2 (ENSBGRG00000018188) #26	FCSK (ENSBGRG00000018254) #27	COG4 (ENSBGRG00000018770) #28	SF3B3 (ENSBGRG00000019103) #29	IL34 (ENSBGRG00000019467) #30	MTSS2 (ENSBGRG00000019583) #31	VAC14 (ENSBGRG00000019691) #32	VSTM2B (ENSBGRG00000020000)	UQCRFS1 (ENSBGRG00000020069)	ENSBGRG00000020116	OR4P4 (ENSBGRG00000020178)	ENSBGRG00000020233	ENSBGRG00000020249	ENSBGRG00000020352
Bos_b	ANCESTRAL SPECIES		ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014	ENSGT00940000162616
Cow	MODERN SPECIES	9	ZNRF1 (ENSBTAG00000034689) #7	WDR59 (ENSBTAG00000016878) #8	ENSBTAG00000053121	FA2H (ENSBTAG00000012222) #9	MLKL (ENSBTAG00000012216) #10	RFWD3 (ENSBTAG00000004460) #11	GLG1 (ENSBTAG00000002303) #13	ENSBTAG00000049998	PDPR (ENSBTAG00000016471) #14	CLEC18C (ENSBTAG00000004766) #16	EXOSC6 (ENSBTAG00000053923) #17	AARS1 (ENSBTAG00000019810) #18	ENSBTAG00000053632	DDX19B (ENSBTAG00000020714) #21	ENSBTAG00000052687	DDX19A (ENSBTAG00000003570) #25	ST3GAL2 (ENSBTAG00000054680) #26	FCSK (ENSBTAG00000012985) #27	COG4 (ENSBTAG00000012988) #28	SF3B3 (ENSBTAG00000010627) #29	IL34 (ENSBTAG00000009357) #30	ENSBTAG00000050915	MTSS2 (ENSBTAG00000009358) #31	VAC14 (ENSBTAG00000023795) #32	VSTM2B (ENSBTAG00000018244)	UQCRFS1 (ENSBTAG00000046786)	OR4P4 (ENSBTAG00000053809)
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00990000206477	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000263669	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00940000161356	ENSGT00390000001014
Goat	MODERN SPECIES	9	LDHD (ENSCHIG00000012303)	ZNRF1 (ENSCHIG00000010049) #7	WDR59 (ENSCHIG00000010052) #8	ENSCHIG00000021153	FA2H (ENSCHIG00000012134) #9	MLKL (ENSCHIG00000019391) #10	RFWD3 (ENSCHIG00000014158) #11	GLG1 (ENSCHIG00000009836) #13	PDPR (ENSCHIG00000016561) #14	ENSCHIG00000019584 #16	EXOSC6 (ENSCHIG00000007389) #17	AARS1 (ENSCHIG00000015632) #18	ENSCHIG00000008029	DDX19B (ENSCHIG00000006239) #21	ENSCHIG00000018774	DDX19A (ENSCHIG00000020418) #25	ST3GAL2 (ENSCHIG00000023912) #26	FCSK (ENSCHIG00000011265) #27	COG4 (ENSCHIG00000017654) #28	SF3B3 (ENSCHIG00000019822) #29	IL34 (ENSCHIG00000020291) #30	MTSS2 (ENSCHIG00000016928) #31	VAC14 (ENSCHIG00000014231) #32	VSTM2B (ENSCHIG00000024095)	UQCRFS1 (ENSCHIG00000015275)	ENSCHIG00000024397	ENSCHIG00000023033	ENSCHIG00000016683	PRP1 (ENSCHIG00000021747)	ENSCHIG00000016409	ENSCHIG00000016032
Camelidae	ANCESTRAL SPECIES	9	ENSGT00940000153216.a.a.c.b.q.a.a	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082.b #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT01100000264053 #19	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000164150	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704
Arabian camel	MODERN SPECIES	35	MLKL (ENSCDRG00005013278) #10	RFWD3 (ENSCDRG00005013151) #11	ENSCDRG00005013138 #12	GLG1 (ENSCDRG00005012462) #13	ENSCDRG00005012399 #14	ENSCDRG00005012342 #15	ENSCDRG00005012252 #16	EXOSC6 (ENSCDRG00005012232) #17	AARS1 (ENSCDRG00005012135) #18	ENSCDRG00005012088 #19	ENSCDRG00005012047 #20	ENSCDRG00005012016 #21	DDX19B (ENSCDRG00005011756) #22	ENSCDRG00005011679 #23	ENSCDRG00005011628 #24	DDX19A (ENSCDRG00005011214) #25	ST3GAL2 (ENSCDRG00005011121) #26	FCSK (ENSCDRG00005010961) #27	COG4 (ENSCDRG00005010542) #28	SF3B3 (ENSCDRG00005010317) #29	IL34 (ENSCDRG00005010189) #30	MTSS2 (ENSCDRG00005010108) #31	ENSCDRG00005010046 #32	ENSCDRG00005010004 #33	ENSCDRG00005009859 #34	ENSCDRG00005009789 #35	HYDIN (ENSCDRG00005009322) #36	CALB2 (ENSCDRG00005009154) #37	TLE7 (ENSCDRG00005008960)	ZNF23 (ENSCDRG00005008865)	ENSCDRG00005008688
Alpaca	MODERN SPECIES	3114													PDPR (ENSVPAG00000003180) #14	ENSVPAG00000003185 #16	AARS1 (ENSVPAG00000003189) #18	DDX19A (ENSVPAG00000003193) #25	ENSVPAG00000003194	ST3GAL2 (ENSVPAG00000003196) #26	FCSK (ENSVPAG00000003198) #27	COG4 (ENSVPAG00000003201) #28	SF3B3 (ENSVPAG00000003202) #29	IL34 (ENSVPAG00000003203) #30
Atlantogenata	ANCESTRAL SPECIES	63	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000016453 #10	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00940000162377	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b	ENSGT00940000159841
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000154417.a.a #25
Sloth	MODERN SPECIES	7836																ENSCHOG00000010216 #25
Afrotheria	ANCESTRAL SPECIES	74	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095.o.a.a #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b	ENSGT00940000159841	ENSGT00950000182838.B.a.a
Afrotheria_a	ANCESTRAL SPECIES	73	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.q.b	ENSGT00940000153216.a.a.c.b.r	ENSGT00940000161694	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00900000141128 #16	ENSGT00940000153348.A #17	ENSGT00940000157335 #18	ENSGT00940000154417.a.b #21	ENSGT00940000154417.a.a #25	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095.o.a.a #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b	ENSGT00940000159841	ENSGT00950000182838.B.a.a
Elephant	MODERN SPECIES	419	BCAR1 (ENSLAFG00000030093)	ENSLAFG00000003127	ENSLAFG00000003128	ZFP1 (ENSLAFG00000003125)	LDHD (ENSLAFG00000002352)	ZNRF1 (ENSLAFG00000022801) #7	WDR59 (ENSLAFG00000023216) #8	FA2H (ENSLAFG00000004266) #9	ENSLAFG00000031897	RFWD3 (ENSLAFG00000001941) #11	GLG1 (ENSLAFG00000015390) #13	PDPR (ENSLAFG00000012857) #14	ENSLAFG00000029900 #16	AARS1 (ENSLAFG00000006645) #18	DDX19B (ENSLAFG00000006651) #21	DDX19A (ENSLAFG00000006659) #25	ST3GAL2 (ENSLAFG00000006664) #26	FCSK (ENSLAFG00000006667) #27	COG4 (ENSLAFG00000006676) #28	SF3B3 (ENSLAFG00000012219) #29	IL34 (ENSLAFG00000009192) #30	MTSS2 (ENSLAFG00000009196) #31	VAC14 (ENSLAFG00000009207) #32	HYDIN (ENSLAFG00000007569) #36	CMTR2 (ENSLAFG00000008334)	CALB2 (ENSLAFG00000021888) #37	ENSLAFG00000030273	CHST4 (ENSLAFG00000010092)	TAT (ENSLAFG00000007152)	MARVELD3 (ENSLAFG00000026764)	PHLPP2 (ENSLAFG00000007685)
Tenrec	MODERN SPECIES	132																DDX19A (ENSETEG00000010419) #25
Mammalia	ANCESTRAL SPECIES																	ENSGT00940000154417.b ##21
Theria	ANCESTRAL SPECIES																	ENSGT00940000154417.b ##21
Marsupialia	DUPLICATION
Marsupialia	ANCESTRAL SPECIES																	ENSGT00940000154417.b.a ##21
Marsupialia_b	ANCESTRAL SPECIES																	ENSGT00940000154417.b.a ##21
Diprotodontia	ANCESTRAL SPECIES																	ENSGT00940000154417.b.a ##21
Diprotodontia_a	ANCESTRAL SPECIES	14	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.o.a	ENSGT00940000153216.a.a.c.b.o.b	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00940000165483	ENSGT00900000141128 #16	ENSGT00940000153348.A.a #17	ENSGT00940000157335 #18	ENSGT01100000265000	ENSGT00940000154417.b.a ##21	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C
koala	MODERN SPECIES	146	ENSPCIG00000010742	ENSPCIG00000010738	LDHD (ENSPCIG00000010735)	ZNRF1 (ENSPCIG00000010731) #7	WDR59 (ENSPCIG00000010715) #8	FA2H (ENSPCIG00000010709) #9	RFWD3 (ENSPCIG00000010708) #11	GLG1 (ENSPCIG00000010704) #13	PDPR (ENSPCIG00000000653) #14	ENSPCIG00000010699	ENSPCIG00000010695 #16	ENSPCIG00000010685 #17	AARS1 (ENSPCIG00000010681) #18	ENSPCIG00000007776	ENSPCIG00000007597 ##21	ENSPCIG00000033903 ##21	ST3GAL2 (ENSPCIG00000013973) #26	FCSK (ENSPCIG00000013978) #27	COG4 (ENSPCIG00000013998) #28	SF3B3 (ENSPCIG00000014927) #29	ENSPCIG00000014944 #30	MTSS2 (ENSPCIG00000014949) #31	VAC14 (ENSPCIG00000016182) #32	HYDIN (ENSPCIG00000014060) #36	CMTR2 (ENSPCIG00000015810)	CALB2 (ENSPCIG00000015805) #37	GOT2 (ENSPCIG00000015804)	SLC38A7 (ENSPCIG00000015802)	ENSPCIG00000008390	CNOT1 (ENSPCIG00000007343)	NDRG4 (ENSPCIG00000007168)
Common wonbat	MODERN SPECIES	1109	ENSVURG00010023002	BCAR1 (ENSVURG00010023010)	ENSVURG00010023024	ENSVURG00010023037	LDHD (ENSVURG00010023041)	ZNRF1 (ENSVURG00010023045) #7	WDR59 (ENSVURG00010023051) #8	FA2H (ENSVURG00010023065) #9	RFWD3 (ENSVURG00010023068) #11	GLG1 (ENSVURG00010023074) #13	PDPR (ENSVURG00010023085) #14	ENSVURG00010023087	ENSVURG00010023092 #16	ENSVURG00010000115	AARS1 (ENSVURG00010000135) #18	ENSVURG00010000213 ##21	ENSVURG00010000326
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000025204	LDHD (ENSSHAG00000010993)	ZNRF1 (ENSSHAG00000030822) #7	WDR59 (ENSSHAG00000011756) #8	FA2H (ENSSHAG00000004764) #9	RFWD3 (ENSSHAG00000005677) #11	GLG1 (ENSSHAG00000003008) #13	ENSSHAG00000006095 #14	ENSSHAG00000030566	ENSSHAG00000006713 #16	EXOSC6 (ENSSHAG00000029181) #17	AARS1 (ENSSHAG00000007347) #18	ENSSHAG00000008169	ENSSHAG00000020684 ##21	ENSSHAG00000007733	ENSSHAG00000028327 ##21	ENSSHAG00000024574	ST3GAL2 (ENSSHAG00000028011) #26	FCSK (ENSSHAG00000000017) #27	COG4 (ENSSHAG00000001444) #28	SF3B3 (ENSSHAG00000000372) #29	ENSSHAG00000032160 #30	VAC14 (ENSSHAG00000005939) #32	MTSS2 (ENSSHAG00000005429) #31	HYDIN (ENSSHAG00000007440) #36	CMTR2 (ENSSHAG00000030558)	ENSSHAG00000020502 #37	ENSSHAG00000022137	ENSSHAG00000011605	SLC38A7 (ENSSHAG00000011773)	ENSSHAG00000011945
Marsupialia	ANCESTRAL SPECIES	17	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.p	ENSGT00940000153216.a.a.c.b.o.a	ENSGT00940000153216.a.a.c.b.o.b	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00940000165483	ENSGT00900000141128 #16	ENSGT00940000153348.A.a #17	ENSGT00940000157335 #18	ENSGT00940000154417.b.b ##21	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00950000183082.a	ENSGT00960000186694	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000167871
Opossum	MODERN SPECIES		ENSMODG00000043252	SIGLEC1 (ENSMODG00000011441)	HSPA12B (ENSMODG00000011447)	ENSMODG00000014688	ENSMODG00000014679	LDHD (ENSMODG00000014671)	ZNRF1 (ENSMODG00000051475) #7	WDR59 (ENSMODG00000014658) #8	ENSMODG00000014635 #11	GLG1 (ENSMODG00000014629) #13	PDPR (ENSMODG00000014604) #14	ENSMODG00000036403	ENSMODG00000014564 #16	EXOSC6 (ENSMODG00000014523) #17	AARS1 (ENSMODG00000014518) #18	ENSMODG00000014494 ##21	ST3GAL2 (ENSMODG00000041100) #26	FCSK (ENSMODG00000014392) #27	COG4 (ENSMODG00000014387) #28	SF3B3 (ENSMODG00000014363) #29	ENSMODG00000014322 #30	MTSS2 (ENSMODG00000014319) #31	VAC14 (ENSMODG00000014308) #32	HYDIN (ENSMODG00000014270) #36	CMTR2 (ENSMODG00000014267)	CALB2 (ENSMODG00000014262) #37	GOT2 (ENSMODG00000014256)	ENSMODG00000049694	SLC38A7 (ENSMODG00000014234)	ENSMODG00000014213	CNOT1 (ENSMODG00000014199)
Marsupialia_b	ANCESTRAL SPECIES	19	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.o.a	ENSGT00940000153216.a.a.c.b.o.b	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00940000165483	ENSGT00900000141128 #16	ENSGT00940000153348.A.a #17	ENSGT00940000157335 #18	ENSGT01100000265000	ENSGT00940000154417.b.b ##21	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00960000186694	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00880000138014.a	ENSGT00940000167871
Diprotodontia	ANCESTRAL SPECIES	13	ENSGT00950000183008.a.b	ENSGT00940000153216.a.a.c.b.o.a	ENSGT00940000153216.a.a.c.b.o.b	ENSGT00940000158705	ENSGT00940000159278 #7	ENSGT00940000157600 #8	ENSGT00390000002142 #9	ENSGT00390000008931 #11	ENSGT00390000011262 #13	ENSGT00940000159082 #14	ENSGT00940000165483	ENSGT00900000141128 #16	ENSGT00940000153348.A.a #17	ENSGT00940000157335 #18	ENSGT01100000265000	ENSGT00940000154417.b.b ##21	ENSGT00940000156356 #26	ENSGT00390000002251 #27	ENSGT00940000154065.a #28	ENSGT00950000183151.a.a.b #29	ENSGT00390000000932 #30	ENSGT00950000183156.a.b.b.a #31	ENSGT00390000008385 #32	ENSGT00610000086095 #36	ENSGT00940000161773	ENSGT00950000183108.b.a.a #37	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00940000167871	ENSGT00390000014869	ENSGT00940000153577.C
Diprotodontia_a	ANCESTRAL SPECIES																	ENSGT00940000154417.b.b ##21
koala	MODERN SPECIES	146	ENSPCIG00000034882	ENSPCIG00000010742	ENSPCIG00000010738	LDHD (ENSPCIG00000010735)	ZNRF1 (ENSPCIG00000010731) #7	WDR59 (ENSPCIG00000010715) #8	FA2H (ENSPCIG00000010709) #9	RFWD3 (ENSPCIG00000010708) #11	GLG1 (ENSPCIG00000010704) #13	PDPR (ENSPCIG00000000653) #14	ENSPCIG00000010699	ENSPCIG00000010695 #16	ENSPCIG00000010685 #17	AARS1 (ENSPCIG00000010681) #18	ENSPCIG00000007776	ENSPCIG00000007597 ##21	ENSPCIG00000033903 ##21	ST3GAL2 (ENSPCIG00000013973) #26	FCSK (ENSPCIG00000013978) #27	COG4 (ENSPCIG00000013998) #28	SF3B3 (ENSPCIG00000014927) #29	ENSPCIG00000014944 #30	MTSS2 (ENSPCIG00000014949) #31	VAC14 (ENSPCIG00000016182) #32	HYDIN (ENSPCIG00000014060) #36	CMTR2 (ENSPCIG00000015810)	CALB2 (ENSPCIG00000015805) #37	GOT2 (ENSPCIG00000015804)	SLC38A7 (ENSPCIG00000015802)	ENSPCIG00000008390	CNOT1 (ENSPCIG00000007343)
Wallaby	MODERN SPECIES	6245																ENSMEUG00000001414 ##21
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000001278	ENSSHAG00000024183	ENSSHAG00000025204	LDHD (ENSSHAG00000010993)	ZNRF1 (ENSSHAG00000030822) #7	WDR59 (ENSSHAG00000011756) #8	FA2H (ENSSHAG00000004764) #9	RFWD3 (ENSSHAG00000005677) #11	GLG1 (ENSSHAG00000003008) #13	ENSSHAG00000006095 #14	ENSSHAG00000030566	ENSSHAG00000006713 #16	EXOSC6 (ENSSHAG00000029181) #17	AARS1 (ENSSHAG00000007347) #18	ENSSHAG00000008169	ENSSHAG00000020684 ##21	ENSSHAG00000007733	ENSSHAG00000028327 ##21	ENSSHAG00000024574	ST3GAL2 (ENSSHAG00000028011) #26	FCSK (ENSSHAG00000000017) #27	COG4 (ENSSHAG00000001444) #28	SF3B3 (ENSSHAG00000000372) #29	ENSSHAG00000032160 #30	VAC14 (ENSSHAG00000005939) #32	MTSS2 (ENSSHAG00000005429) #31	HYDIN (ENSSHAG00000007440) #36	CMTR2 (ENSSHAG00000030558)	ENSSHAG00000020502 #37	ENSSHAG00000022137	ENSSHAG00000011605
Sauria	ANCESTRAL SPECIES	19	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.B	ENSGT01030000234960.b	ENSGT00970000193558	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01060000248958	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000161819	ENSGT00940000155096	ENSGT00940000161938	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238
Lepidosauria	ANCESTRAL SPECIES	61	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.B	ENSGT01030000234960.b	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01060000248958	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000161819	ENSGT00940000155096	ENSGT00940000161938	ENSGT00940000161504	ENSGT00390000016392	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461
Episquamata	ANCESTRAL SPECIES	16	ENSGT00940000156792	ENSGT00390000004248	ENSGT00940000169116	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000165203	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000161819	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00940000154417 #21	ENSGT01060000248958	ENSGT00390000012939	ENSGT00940000162826	ENSGT00970000193558	ENSGT01030000234960.b	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a	ENSGT00940000155851	ENSGT00940000159698	ENSGT01030000234528.B.a.a	ENSGT00390000012058.c.b	ENSGT00940000154171.A	ENSGT00390000009278
Laterata	ANCESTRAL SPECIES	59													ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT00940000154417 #21	ENSGT01060000248958	ENSGT00390000012939	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a	ENSGT00940000155851	ENSGT00940000159698	ENSGT01030000234528.B.a.a	ENSGT00390000012058.c.b	ENSGT00940000154171.A	ENSGT00390000009278	ENSGT00940000154570.b
Argentine black and white tegu	MODERN SPECIES	60	ZMYND12 (ENSSMRG00000007876)	PPCS (ENSSMRG00000007880)	ENSSMRG00000007882	ENSSMRG00000007887	PPIH (ENSSMRG00000007890)	YBX1 (ENSSMRG00000007892)	ENSSMRG00000007897	OTUD3 (ENSSMRG00000007899)	ENSSMRG00000007904	ENSSMRG00000007921	PLA2G2F (ENSSMRG00000007922)	MUL1 (ENSSMRG00000007925)	CAMK2N1 (ENSSMRG00000007926)	ENSSMRG00000007931	VWA5B1 (ENSSMRG00000007940)	ENSSMRG00000007952 #21	ENSSMRG00000007955	UBXN10 (ENSSMRG00000007957)	FAM43B (ENSSMRG00000007960)	ENSSMRG00000007967	ENSSMRG00000007970	CDA (ENSSMRG00000007986)	PINK1 (ENSSMRG00000007989)	AGMAT (ENSSMRG00000007992)	DNAJC16 (ENSSMRG00000007994)	CASP9 (ENSSMRG00000008003)	ENSSMRG00000008005	ENSSMRG00000008006	EFHD2 (ENSSMRG00000008057)	FHAD1 (ENSSMRG00000008059)	ENSSMRG00000008064
Common wall lizard	MODERN SPECIES	16	PHF13 (ENSPMRG00000012530)	DNAJC11 (ENSPMRG00000012533)	ENSPMRG00000012540	CAMTA1 (ENSPMRG00000012543)	VAMP3 (ENSPMRG00000012545)	PER3 (ENSPMRG00000012550)	ENSPMRG00000012554	PARK7 (ENSPMRG00000012558)	ENSPMRG00000012563	ERRFI1 (ENSPMRG00000012566)	ENSPMRG00000012570	ZBTB40 (ENSPMRG00000012578)	MUL1 (ENSPMRG00000012597)	CAMK2N1 (ENSPMRG00000012600)	VWA5B1 (ENSPMRG00000012602)	ENSPMRG00000012615 #21	ENSPMRG00000012632	UBXN10 (ENSPMRG00000012634)	FAM43B (ENSPMRG00000012636)	ENSPMRG00000012640	ENSPMRG00000012645	CDA (ENSPMRG00000012649)	PINK1 (ENSPMRG00000012655)	AGMAT (ENSPMRG00000012661)	DNAJC16 (ENSPMRG00000012667)	CASP9 (ENSPMRG00000012680)	ENSPMRG00000012687	ENSPMRG00000012696	ENSPMRG00000012714	EFHD2 (ENSPMRG00000012731)	ENSPMRG00000012738
Toxicofera	ANCESTRAL SPECIES	41	ENSGT00940000160840	ENSGT00940000156792	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000165203	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000161819	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000162826	ENSGT00970000193558	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a	ENSGT00940000155851	ENSGT00940000159698	ENSGT01030000234528.B.a.a	ENSGT00390000012058.c.b	ENSGT00940000154171.A	ENSGT00390000009278	ENSGT00940000154570.b	ENSGT00940000159410
Elapidae	ANCESTRAL SPECIES	40	ENSGT00940000160840	ENSGT00940000156792	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721.a	ENSGT00940000165203	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000161819	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000162826	ENSGT00970000193558	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a	ENSGT00940000155851	ENSGT00940000159698	ENSGT01030000234528.B.a.a	ENSGT00390000012058.c.b	ENSGT00940000154171.A	ENSGT00390000009278	ENSGT00940000154570.b	ENSGT00940000159410
Elapidae_a	ANCESTRAL SPECIES	88	ENSGT00390000017394	ENSGT00510000048612	ENSGT00940000156792	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721.a	ENSGT00940000153341.b	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000162826	ENSGT00970000193558
Acanthophiinae	ANCESTRAL SPECIES	78	ENSGT00390000017213.B	ENSGT00390000017394	ENSGT00510000048612	ENSGT00940000156792	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000154721.a	ENSGT00940000153341.b	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000162826	ENSGT00970000193558	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00940000155851	ENSGT00940000159698	ENSGT01030000234528.B.a.a	ENSGT00390000012058.c.b	ENSGT00940000154171.A	ENSGT00390000009278	ENSGT00940000154570.b	ENSGT00940000159410	ENSGT01000000221037
Mainland tiger snake	MODERN SPECIES	255	SLC2A1 (ENSNSUG00000018681)	ENSNSUG00000018680	ZMYND12 (ENSNSUG00000018679)	PPCS (ENSNSUG00000018678)	ENSNSUG00000018677	YBX1 (ENSNSUG00000018676)	OTUD3 (ENSNSUG00000018675)	PLA2G2E (ENSNSUG00000018674)	PLA2G2A (ENSNSUG00000018673)	ENSNSUG00000018672	ENSNSUG00000018671	MUL1 (ENSNSUG00000018670)	CAMK2N1 (ENSNSUG00000018669)	VWA5B1 (ENSNSUG00000018668)	ENSNSUG00000018666	ENSNSUG00000018665 #21	UBXN10 (ENSNSUG00000018664)	FAM43B (ENSNSUG00000018663)	ENSNSUG00000018662	ENSNSUG00000018661	CDA (ENSNSUG00000018660)	PINK1 (ENSNSUG00000018659)	DNAJC16 (ENSNSUG00000018658)	CASP9 (ENSNSUG00000018657)	ENSNSUG00000018656	EFHD2 (ENSNSUG00000018655)	FHAD1 (ENSNSUG00000018654)	TMEM51 (ENSNSUG00000018653)	ENSNSUG00000018652	PRDM2 (ENSNSUG00000018651)	ENSNSUG00000018650
Eastern brown snake	MODERN SPECIES	148	RNF207 (ENSPTXG00000015684)	SLC2A1 (ENSPTXG00000015681)	ZMYND12 (ENSPTXG00000015674)	PPCS (ENSPTXG00000015673)	ENSPTXG00000015672	ENSPTXG00000015671	YBX1 (ENSPTXG00000015670)	OTUD3 (ENSPTXG00000015668)	PLA2G2E (ENSPTXG00000015667)	PLA2G2A (ENSPTXG00000015663)	ENSPTXG00000015662	ENSPTXG00000015661	CAMK2N1 (ENSPTXG00000015660)	VWA5B1 (ENSPTXG00000015659)	ENSPTXG00000015657	ENSPTXG00000015655 #21	UBXN10 (ENSPTXG00000015651)	FAM43B (ENSPTXG00000015650)	ENSPTXG00000015648	ENSPTXG00000015646	CDA (ENSPTXG00000015644)	PINK1 (ENSPTXG00000015642)	DNAJC16 (ENSPTXG00000015639)	CASP9 (ENSPTXG00000015636)	ENSPTXG00000015634	ENSPTXG00000015607	ENSPTXG00000015604	TMEM51 (ENSPTXG00000015603)	KAZN (ENSPTXG00000015599)	PRDM2 (ENSPTXG00000012157)	CFAP107 (ENSPTXG00000012154)
Blue-lipped sea krait	MODERN SPECIES	4006															ENSLLTG00000005077	ENSLLTG00000005059 #21	FAM43B (ENSLLTG00000005038)	ENSLLTG00000005026	ENSLLTG00000005017	PINK1 (ENSLLTG00000004997)
Indian cobra	MODERN SPECIES	9	LRRC47 (ENSNNAG00000013523)	ZNF362 (ENSNNAG00000013563)	PHC2 (ENSNNAG00000013580)	SLC2A1 (ENSNNAG00000013614)	ZMYND12 (ENSNNAG00000013645)	PPCS (ENSNNAG00000013657)	PPIH (ENSNNAG00000013667)	ENSNNAG00000013686	OTUD3 (ENSNNAG00000013721)	PLA2G2E (ENSNNAG00000013762)	ENSNNAG00000013816	PLA2G2A (ENSNNAG00000013873)	PLA2G2F (ENSNNAG00000013916)	CAMK2N1 (ENSNNAG00000013932)	VWA5B1 (ENSNNAG00000013951)	ENSNNAG00000014065 #21	ENSNNAG00000014115	UBXN10 (ENSNNAG00000014152)	ENSNNAG00000014187	FAM43B (ENSNNAG00000014204)	ENSNNAG00000014219	PINK1 (ENSNNAG00000014240)	AGMAT (ENSNNAG00000014279)	ICMT (ENSNNAG00000014294)	DNAJC16 (ENSNNAG00000014327)	CASP9 (ENSNNAG00000014357)	ENSNNAG00000014388	EFHD2 (ENSNNAG00000014411)	FHAD1 (ENSNNAG00000014449)	TMEM51 (ENSNNAG00000014510)	KAZN (ENSNNAG00000014622)
tuatara	MODERN SPECIES	1194														VWA5B1 (ENSSPUG00000001534)	ENSSPUG00000001505	ENSSPUG00000001477 #21	UBXN10 (ENSSPUG00000001467)	ENSSPUG00000001371	PLA2G2A (ENSSPUG00000001349)	PLA2G2D (ENSSPUG00000001336)	PLA2G2E (ENSSPUG00000001314)	OTUD3 (ENSSPUG00000001311)	TMCO4 (ENSSPUG00000001248)	HTR6 (ENSSPUG00000001228)	NBL1 (ENSSPUG00000001219)	ENSSPUG00000001217	CAPZB (ENSSPUG00000001202)	SLC66A1 (ENSSPUG00000001166)	AKR7L (ENSSPUG00000001126)	MRTO4 (ENSSPUG00000001110)	EMC1 (ENSSPUG00000001022)
Archelosauria	ANCESTRAL SPECIES	23	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.B	ENSGT01030000234960.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01060000248958	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000161819	ENSGT00940000155096	ENSGT00940000161938	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238
Cryptodira	ANCESTRAL SPECIES	24	ENSGT00940000154171.A.g	ENSGT00940000154171.A.h	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.B	ENSGT01030000234960.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000161819	ENSGT00940000155096	ENSGT00940000161938	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT00940000154484.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238
Testudinoidea	ANCESTRAL SPECIES	20	ENSGT00940000154171.A.h	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.B	ENSGT01030000234960.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01100000264053 #19	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000161819	ENSGT00940000155096	ENSGT00940000161938	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT00940000154484.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238
Testudinidae	ANCESTRAL SPECIES	22	ENSGT00940000154171.A.h	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.B	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01100000264053 #19	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000161819	ENSGT00940000155096	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT00940000154484.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461
Goode s thornscrub tortoise	MODERN SPECIES	9	EFHD2 (ENSGEVG00005006961)	ENSGEVG00005006814	ENSGEVG00005006715	CASP9 (ENSGEVG00005006692)	DNAJC16 (ENSGEVG00005006658)	AGMAT (ENSGEVG00005006633)	PINK1 (ENSGEVG00005006618)	CDA (ENSGEVG00005006604)	ENSGEVG00005006573	FAM43B (ENSGEVG00005006551)	ENSGEVG00005006480	MUL1 (ENSGEVG00005006466)	CAMK2N1 (ENSGEVG00005006444)	VWA5B1 (ENSGEVG00005006355)	ENSGEVG00005006321 #19	ENSGEVG00005006293 #21	UBXN10 (ENSGEVG00005006267)	PLA2G2F (ENSGEVG00005006187)	PLA2G2A (ENSGEVG00005006116)	ENSGEVG00005006055	PLA2G2E (ENSGEVG00005005980)	OTUD3 (ENSGEVG00005005937)	RNF186 (ENSGEVG00005005919)	TMCO4 (ENSGEVG00005005873)	ENSGEVG00005005832	NBL1 (ENSGEVG00005005796)	ENSGEVG00005005764	CAPZB (ENSGEVG00005005733)	SLC66A1 (ENSGEVG00005005688)	AKR7L (ENSGEVG00005005659)	MRTO4 (ENSGEVG00005005628)
Abingdon island giant tortoise	MODERN SPECIES	679	ENSCABG00000020358	EFHD2 (ENSCABG00000020354)	ENSCABG00000020352	ENSCABG00000020329	CASP9 (ENSCABG00000020326)	DNAJC16 (ENSCABG00000020306)	AGMAT (ENSCABG00000020303)	PINK1 (ENSCABG00000020302)	CDA (ENSCABG00000020299)	ENSCABG00000020298	ENSCABG00000020296	MUL1 (ENSCABG00000020295)	ENSCABG00000020293	VWA5B1 (ENSCABG00000020288)	ENSCABG00000020284 #19	ENSCABG00000019336 #21	UBXN10 (ENSCABG00000019301)	PLA2G2F (ENSCABG00000019300)	ENSCABG00000019298	PLA2G2A (ENSCABG00000019297)	ENSCABG00000019293	PLA2G2E (ENSCABG00000019288)	OTUD3 (ENSCABG00000019279)	RNF186 (ENSCABG00000019277)	TMCO4 (ENSCABG00000019272)	ENSCABG00000019271	NBL1 (ENSCABG00000019270)	ENSCABG00000019269	CAPZB (ENSCABG00000019268)
Emydidae	ANCESTRAL SPECIES	23	ENSGT00940000154171.A.h	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.B	ENSGT01030000234960.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01100000264053 #19	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000161819	ENSGT00940000155096	ENSGT00940000161938	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238
Three-toed box turtle	MODERN SPECIES	345	ENSTMTG00000022089	EFHD2 (ENSTMTG00000022096)	ENSTMTG00000022107	ENSTMTG00000022123	CASP9 (ENSTMTG00000022129)	DNAJC16 (ENSTMTG00000022137)	AGMAT (ENSTMTG00000022143)	PINK1 (ENSTMTG00000022145)	CDA (ENSTMTG00000022150)	ENSTMTG00000022159	ENSTMTG00000022166	FAM43B (ENSTMTG00000022169)	MUL1 (ENSTMTG00000022171)	CAMK2N1 (ENSTMTG00000022177)	VWA5B1 (ENSTMTG00000022184)	ENSTMTG00000022192 #21	ENSTMTG00000022199 #19	UBXN10 (ENSTMTG00000022201)	PLA2G2F (ENSTMTG00000022209)	PLA2G2A (ENSTMTG00000022227)	PLA2G2E (ENSTMTG00000022237)	OTUD3 (ENSTMTG00000022238)	RNF186 (ENSTMTG00000022241)	TMCO4 (ENSTMTG00000022243)	ENSTMTG00000022248	NBL1 (ENSTMTG00000022252)	ENSTMTG00000022253	CAPZB (ENSTMTG00000022257)	SLC66A1 (ENSTMTG00000022258)	EMC1 (ENSTMTG00000017308)	UBR4 (ENSTMTG00000017434)
painted turtle	MODERN SPECIES	10	TMEM51 (ENSCPBG00000023682)	FHAD1 (ENSCPBG00000023671)	EFHD2 (ENSCPBG00000023665)	ENSCPBG00000023656	ENSCPBG00000023652	ENSCPBG00000023644	CASP9 (ENSCPBG00000023640)	DNAJC16 (ENSCPBG00000023635)	PINK1 (ENSCPBG00000023631)	CDA (ENSCPBG00000023627)	ENSCPBG00000023625	MUL1 (ENSCPBG00000023621)	CAMK2N1 (ENSCPBG00000023620)	VWA5B1 (ENSCPBG00000023615)	ENSCPBG00000023610 #19	ENSCPBG00000023607 #21	UBXN10 (ENSCPBG00000023605)	PLA2G2F (ENSCPBG00000023601)	ENSCPBG00000023599	PLA2G2A (ENSCPBG00000023596)	PLA2G2D (ENSCPBG00000023592)	PLA2G2E (ENSCPBG00000023589)	OTUD3 (ENSCPBG00000023583)	ENSCPBG00000023580	TMCO4 (ENSCPBG00000023577)	HTR6 (ENSCPBG00000023575)	NBL1 (ENSCPBG00000023574)	MICOS10 (ENSCPBG00000023572)	CAPZB (ENSCPBG00000023567)	SLC66A1 (ENSCPBG00000023564)	AKR7L (ENSCPBG00000023563)
Chinese turtle	MODERN SPECIES	1815	KAZN (ENSPSIG00000004630)	TMEM51 (ENSPSIG00000004728)	ENSPSIG00000004741	ENSPSIG00000004782	EFHD2 (ENSPSIG00000004822)	ENSPSIG00000004877	ENSPSIG00000004913	CASP9 (ENSPSIG00000004920)	DNAJC16 (ENSPSIG00000005041)	AGMAT (ENSPSIG00000005185)	PINK1 (ENSPSIG00000005240)	CDA (ENSPSIG00000005259)	ENSPSIG00000005280	MUL1 (ENSPSIG00000005341)	ENSPSIG00000005359	ENSPSIG00000005418 #21	UBXN10 (ENSPSIG00000001818)	PLA2G2F (ENSPSIG00000005487)	PLA2G2A (ENSPSIG00000005632)	ENSPSIG00000005759	PLA2G2E (ENSPSIG00000005789)	ENSPSIG00000005969	ENSPSIG00000006076	FBXO2 (ENSPSIG00000006095)	DISP3 (ENSPSIG00000006141)
Archosauria	ANCESTRAL SPECIES	21	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.B	ENSGT01030000234960.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01060000248958	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000155096	ENSGT00940000161938	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461
Aves	ANCESTRAL SPECIES	27	ENSGT00940000159410.a	ENSGT00940000154570.b	ENSGT00390000009278	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01060000248958	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000155096	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461	ENSGT00600000084471
Neognathae	ANCESTRAL SPECIES	25	ENSGT00390000009278	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01030000234960.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01060000248958	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000154885.C	ENSGT00940000155096	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461
Galloanserae	ANCESTRAL SPECIES	24	ENSGT00390000009278	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01030000234960.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01060000248958	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000154885.C	ENSGT00940000155096	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461
Phasianidae	ANCESTRAL SPECIES	23	ENSGT00390000009278	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01060000248958	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000154885.C	ENSGT00940000155096	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461
Japanese quail	MODERN SPECIES	13	PRDM2 (ENSCJPG00005001242)	KAZN (ENSCJPG00005001210)	TMEM51 (ENSCJPG00005001199)	EFHD2 (ENSCJPG00005001196)	ENSCJPG00005000638	CASP9 (ENSCJPG00005000611)	DNAJC16 (ENSCJPG00005000051)	AGMAT (ENSCJPG00005018724)	PINK1 (ENSCJPG00005018723)	CDA (ENSCJPG00005018722)	MUL1 (ENSCJPG00005018718)	FAM43B (ENSCJPG00005018716)	CAMK2N1 (ENSCJPG00005018715)	VWA5B1 (ENSCJPG00005018713)	ENSCJPG00005018712	ENSCJPG00005018711 #21	ENSCJPG00005018710	UBXN10 (ENSCJPG00005018709)	PLA2G2A (ENSCJPG00005018708)	PLA2G2E (ENSCJPG00005018707)	OTUD3 (ENSCJPG00005018706)	RNF186 (ENSCJPG00005018705)	TMCO4 (ENSCJPG00005018704)	HTR6 (ENSCJPG00005018703)	NBL1 (ENSCJPG00005018702)	MICOS10 (ENSCJPG00005018701)	CAPZB (ENSCJPG00005018700)	SLC66A1 (ENSCJPG00005018699)	AKR7L (ENSCJPG00005018698)	MRTO4 (ENSCJPG00005018697)	EMC1 (ENSCJPG00005018273)
Phasianidae_b	ANCESTRAL SPECIES	33	ENSGT00390000009278	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01060000248958	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000154885.C	ENSGT00940000155096	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461
Chicken	MODERN SPECIES	13	KAZN (ENSGALG00010021003)	TMEM51 (ENSGALG00010020971)	FHAD1 (ENSGALG00010020955)	EFHD2 (ENSGALG00010020950)	CTRC (ENSGALG00010020939)	CASP9 (ENSGALG00010020932)	DNAJC16 (ENSGALG00010020924)	AGMAT (ENSGALG00010020903)	PINK1 (ENSGALG00010020873)	CDA (ENSGALG00010020861)	FAM43B (ENSGALG00010021893)	MUL1 (ENSGALG00010020831)	CAMK2N1 (ENSGALG00010020828)	VWA5B1 (ENSGALG00010020820)	ENSGALG00010020792	DDX19 (ENSGALG00010020786) #21	PLA2G2A (ENSGALG00010020777)	UBXN10 (ENSGALG00010020767)	PLA2G5 (ENSGALG00010020717)	PLA2G2E (ENSGALG00010020711)	OTUD3 (ENSGALG00010020679)	RNF186 (ENSGALG00010020672)	TMCO4 (ENSGALG00010020666)	HTR6 (ENSGALG00010020643)	NBL1 (ENSGALG00010020636)	MINOS1 (ENSGALG00010020624)	CAPZB (ENSGALG00010020608)	PQLC2 (ENSGALG00010020594)	AKR7L (ENSGALG00010020576)	MRTO4 (ENSGALG00010020571)	EMC1 (ENSGALG00010020556)
Turkey	MODERN SPECIES	15	ENSMGAG00000005392	ENSMGAG00000005361	ENSMGAG00000005419	ENSMGAG00000005405	MICOS10 (ENSMGAG00000022192)	TMCO4 (ENSMGAG00000005480)	ENSMGAG00000005473	ENSMGAG00000005459	RNF186 (ENSMGAG00000005496)	OTUD3 (ENSMGAG00000005533)	ENSMGAG00000005563	ENSMGAG00000005585	ENSMGAG00000017176	UBXN10 (ENSMGAG00000015759)	ENSMGAG00000017968	ENSMGAG00000005683 #21	ENSMGAG00000017872	ENSMGAG00000018788	ENSMGAG00000015761	ENSMGAG00000005830	ENSMGAG00000005524	ENSMGAG00000005498	ENSMGAG00000005542	TMEM51 (ENSMGAG00000005828)	ENSMGAG00000019136	EFHD2 (ENSMGAG00000019172)	ENSMGAG00000005613	CASP9 (ENSMGAG00000005586)	ENSMGAG00000005839	PRDM2 (ENSMGAG00000005888)	ENSMGAG00000005917
Anatidae	ANCESTRAL SPECIES	19	ENSGT00940000159410.a	ENSGT00940000154570.b	ENSGT00390000009278	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01030000234960.b	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT00940000154417 #21	ENSGT01060000248958	ENSGT00390000012939	ENSGT00940000154885.C	ENSGT00940000155096	ENSGT00940000161938	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154436.b	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091
Pink-footed goose	MODERN SPECIES	41	LRRC38 (ENSABRG00000020772)	ENSABRG00000020776	PRDM2 (ENSABRG00000020778)	KAZN (ENSABRG00000020782)	TMEM51 (ENSABRG00000020784)	EFHD2 (ENSABRG00000020787)	ENSABRG00000020792	CASP9 (ENSABRG00000020813)	DNAJC16 (ENSABRG00000020816)	AGMAT (ENSABRG00000020827)	PINK1 (ENSABRG00000020829)	CDA (ENSABRG00000020831)	ENSABRG00000020833	MUL1 (ENSABRG00000020835)	VWA5B1 (ENSABRG00000020837)	ENSABRG00000020846 #21	ENSABRG00000020849	UBXN10 (ENSABRG00000020851)	ENSABRG00000020853	PLA2G2A (ENSABRG00000020854)	OTUD3 (ENSABRG00000020862)	ENSABRG00000020866	TMCO4 (ENSABRG00000020868)	HTR6 (ENSABRG00000020875)	ENSABRG00000020880	ENSABRG00000020882	EPHA8 (ENSABRG00000020916)	C1QA (ENSABRG00000020948)	C1QC (ENSABRG00000020954)	C1QB (ENSABRG00000020957)	ENSABRG00000020961
Duck	MODERN SPECIES	2640																ENSAPLG00000022707 #21
Neognathae_b	ANCESTRAL SPECIES	25	ENSGT00390000009278	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01030000234960.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01060000248958	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000154885.C	ENSGT00940000155096	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461
Passeriformes	ANCESTRAL SPECIES	22	ENSGT01030000234528.B.a.a.`b.b	ENSGT00990000212679	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a.`b.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01030000234960.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01060000248958	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000154885.C	ENSGT00940000155096	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461
Great tit	MODERN SPECIES	13	EPHB2 (ENSPMJG00000002774)	LACTBL1 (ENSPMJG00000002736)	ENSPMJG00000002719	ENSPMJG00000002714	ENSPMJG00000002713	CASP9 (ENSPMJG00000002704)	DNAJC16 (ENSPMJG00000002700)	PINK1 (ENSPMJG00000002689)	CDA (ENSPMJG00000002685)	ENSPMJG00000002683	FAM43B (ENSPMJG00000002680)	MUL1 (ENSPMJG00000002678)	CAMK2N1 (ENSPMJG00000002672)	VWA5B1 (ENSPMJG00000002651)	ENSPMJG00000002644	ENSPMJG00000002634 #21	UBXN10 (ENSPMJG00000002633)	ENSPMJG00000002631	PLA2G2A (ENSPMJG00000002599)	PLA2G2E (ENSPMJG00000002588)	OTUD3 (ENSPMJG00000002584)	RNF186 (ENSPMJG00000002580)	TMCO4 (ENSPMJG00000002568)	HTR6 (ENSPMJG00000002561)	NBL1 (ENSPMJG00000002553)	MICOS10 (ENSPMJG00000002540)	CAPZB (ENSPMJG00000002531)	SLC66A1 (ENSPMJG00000002521)	AKR7L (ENSPMJG00000002498)	MRTO4 (ENSPMJG00000002289)	UBR4 (ENSPMJG00000000289)
Passeriformes_d	ANCESTRAL SPECIES	22	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a.`b.b	ENSGT01030000234528.B.a.a.`b.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01060000248958	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000154885.C	ENSGT00940000155096	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461
Flycatcher	MODERN SPECIES	13	ENSFALG00000010480	ENSFALG00000010485	ENSFALG00000010496	ENSFALG00000026379	EFHD2 (ENSFALG00000025188)	ENSFALG00000010502	CASP9 (ENSFALG00000010504)	ENSFALG00000010510	AGMAT (ENSFALG00000010520)	PINK1 (ENSFALG00000010528)	CDA (ENSFALG00000023675)	MUL1 (ENSFALG00000010538)	ENSFALG00000028040	VWA5B1 (ENSFALG00000010546)	ENSFALG00000028355	ENSFALG00000010555 #21	UBXN10 (ENSFALG00000028934)	ENSFALG00000010564	PLA2G2A (ENSFALG00000010570)	OTUD3 (ENSFALG00000010579)	ENSFALG00000028184	HTR6 (ENSFALG00000010591)	NBL1 (ENSFALG00000028409)	TMCO4 (ENSFALG00000010586)	MICOS10 (ENSFALG00000010599)	CAPZB (ENSFALG00000010602)	SLC66A1 (ENSFALG00000010611)	AKR7L (ENSFALG00000010615)	MRTO4 (ENSFALG00000027816)	EMC1 (ENSFALG00000010623)	UBR4 (ENSFALG00000010637)
Passeriformes_g	ANCESTRAL SPECIES	35	ENSGT00990000212679	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a.`b.b	ENSGT01030000234528.B.a.a.`b.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01060000248958	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000154885.C	ENSGT00940000155096	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461
Passeroidea	ANCESTRAL SPECIES	26	ENSGT00450000040404.a	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a.`b.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01060000248958	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000154885.C	ENSGT00940000155096	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461
Zebra finch	MODERN SPECIES	14	EPHB2 (ENSTGUG00000017194)	LACTBL1 (ENSTGUG00000024241)	EFHD2 (ENSTGUG00000021308)	ENSTGUG00000021791	CASP9 (ENSTGUG00000017156)	DNAJC16 (ENSTGUG00000017133)	AGMAT (ENSTGUG00000017123)	PINK1 (ENSTGUG00000017113)	CDA (ENSTGUG00000022059)	FAM43B (ENSTGUG00000017109)	ENSTGUG00000020670	MUL1 (ENSTGUG00000024353)	ENSTGUG00000023378	VWA5B1 (ENSTGUG00000017103)	ENSTGUG00000022087	ENSTGUG00000017064 #21	UBXN10 (ENSTGUG00000019929)	ENSTGUG00000017056	PLA2G2A (ENSTGUG00000024394)	PLA2G2E (ENSTGUG00000015886)	OTUD3 (ENSTGUG00000017052)	ENSTGUG00000024231	TMCO4 (ENSTGUG00000017041)	HTR6 (ENSTGUG00000026422)	NBL1 (ENSTGUG00000023888)	MICOS10 (ENSTGUG00000016993)	CAPZB (ENSTGUG00000020035)	ENSTGUG00000029506	ENSTGUG00000016951	ENSTGUG00000028434	ENSTGUG00000025063
Common canary	MODERN SPECIES	95				FHAD1 (ENSSCAG00000001050)	EFHD2 (ENSSCAG00000001074)	ENSSCAG00000001088	CASP9 (ENSSCAG00000001095)	DNAJC16 (ENSSCAG00000001134)	AGMAT (ENSSCAG00000001277)	PINK1 (ENSSCAG00000001288)	CDA (ENSSCAG00000001316)	FAM43B (ENSSCAG00000001321)	MUL1 (ENSSCAG00000001326)	ENSSCAG00000001331	VWA5B1 (ENSSCAG00000001356)	ENSSCAG00000001407 #21	ENSSCAG00000001423	ENSSCAG00000001427	ENSSCAG00000001431	PLA2G2A (ENSSCAG00000001435)	PLA2G2E (ENSSCAG00000001446)	OTUD3 (ENSSCAG00000001453)	RNF186 (ENSSCAG00000001457)	TMCO4 (ENSSCAG00000001466)	HTR6 (ENSSCAG00000001479)	NBL1 (ENSSCAG00000001486)	MICOS10 (ENSSCAG00000001490)	CAPZB (ENSSCAG00000001495)	SLC66A1 (ENSSCAG00000001511)	AKR7A2 (ENSSCAG00000001524)	MRTO4 (ENSSCAG00000001539)
Medium ground finch	MODERN SPECIES	176	EPHB2 (ENSGFOG00000010250)	LACTBL1 (ENSGFOG00000010243)	ENSGFOG00000010234	EFHD2 (ENSGFOG00000010225)	ENSGFOG00000010098	ENSGFOG00000010038	ENSGFOG00000010014	CASP9 (ENSGFOG00000010001)	DNAJC16 (ENSGFOG00000009964)	AGMAT (ENSGFOG00000009955)	PINK1 (ENSGFOG00000009947)	CDA (ENSGFOG00000009939)	MUL1 (ENSGFOG00000009936)	ENSGFOG00000009933	VWA5B1 (ENSGFOG00000009903)	ENSGFOG00000009894 #21	UBXN10 (ENSGFOG00000009886)	ENSGFOG00000009882	PLA2G2A (ENSGFOG00000009872)	PLA2G2E (ENSGFOG00000009861)	OTUD3 (ENSGFOG00000009852)	ENSGFOG00000009844	TMCO4 (ENSGFOG00000009827)	HTR6 (ENSGFOG00000009821)	NBL1 (ENSGFOG00000009816)	MICOS10 (ENSGFOG00000009811)	CAPZB (ENSGFOG00000009795)	SLC66A1 (ENSGFOG00000009782)	AKR7L (ENSGFOG00000009770)	MRTO4 (ENSGFOG00000009749)	EMC1 (ENSGFOG00000009726)
Neognathae_c	ANCESTRAL SPECIES	28	ENSGT00940000154570.b	ENSGT00390000009278	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01030000234960.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT00940000154417 #21	ENSGT01060000248958	ENSGT00390000012939	ENSGT00940000154885.C	ENSGT00940000161938	ENSGT00940000155096	ENSGT00940000161504	ENSGT00390000016392	ENSGT00510000049175	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496
Kakapo	MODERN SPECIES	10	KAZN (ENSSHBG00005005907)	TMEM51 (ENSSHBG00005005923)	FHAD1 (ENSSHBG00005005962)	EFHD2 (ENSSHBG00005006027)	ENSSHBG00005006127	CASP9 (ENSSHBG00005006850)	DNAJC16 (ENSSHBG00005006898)	AGMAT (ENSSHBG00005006951)	PINK1 (ENSSHBG00005006972)	CDA (ENSSHBG00005007006)	ENSSHBG00005007028	FAM43B (ENSSHBG00005007040)	MUL1 (ENSSHBG00005007046)	CAMK2N1 (ENSSHBG00005007063)	VWA5B1 (ENSSHBG00005007091)	ENSSHBG00005007113 #21	ENSSHBG00005007134	UBXN10 (ENSSHBG00005007154)	ENSSHBG00005007169	PLA2G2A (ENSSHBG00005007191)	PLA2G2E (ENSSHBG00005007217)	ENSSHBG00005007234	RNF186 (ENSSHBG00005007254)	TMCO4 (ENSSHBG00005007286)	HTR6 (ENSSHBG00005007418)	NBL1 (ENSSHBG00005007445)	CAPZB (ENSSHBG00005007468)	SLC66A1 (ENSSHBG00005007510)	AKR7L (ENSSHBG00005007578)	MRTO4 (ENSSHBG00005007596)	EMC1 (ENSSHBG00005007634)
Golden eagle	MODERN SPECIES	22	KAZN (ENSACCG00020000725)	TMEM51 (ENSACCG00020000756)	ENSACCG00020000785	EFHD2 (ENSACCG00020000803)	ENSACCG00020000876	CASP9 (ENSACCG00020000905)	DNAJC16 (ENSACCG00020000931)	AGMAT (ENSACCG00020000956)	PINK1 (ENSACCG00020000972)	CDA (ENSACCG00020000989)	ENSACCG00020001001	FAM43B (ENSACCG00020001015)	MUL1 (ENSACCG00020001030)	CAMK2N1 (ENSACCG00020001046)	VWA5B1 (ENSACCG00020001113)	ENSACCG00020001191 #21	ENSACCG00020001209	UBXN10 (ENSACCG00020001219)	ENSACCG00020001227	PLA2G2D (ENSACCG00020001241)	OTUD3 (ENSACCG00020001269)	RNF186 (ENSACCG00020001280)	TMCO4 (ENSACCG00020001295)	HTR6 (ENSACCG00020001305)	NBL1 (ENSACCG00020001317)	MICOS10 (ENSACCG00020001368)	CAPZB (ENSACCG00020001383)	SLC66A1 (ENSACCG00020001417)	AKR7L (ENSACCG00020001489)	MRTO4 (ENSACCG00020001513)	EMC1 (ENSACCG00020001534)
African ostrich	MODERN SPECIES	879													MUL1 (ENSSCUG00000016565)	VWA5B1 (ENSSCUG00000016563)	ENSSCUG00000016557	ENSSCUG00000016554 #21	UBXN10 (ENSSCUG00000016552)	PLA2G2A (ENSSCUG00000016551)	ENSSCUG00000016548	OTUD3 (ENSSCUG00000016546)	RNF186 (ENSSCUG00000016544)	TMCO4 (ENSSCUG00000016541)	MICOS10 (ENSSCUG00000016535)	ENSSCUG00000016533	CAPZB (ENSSCUG00000016530)	SLC66A1 (ENSSCUG00000016525)	AKR7L (ENSSCUG00000016509)	MRTO4 (ENSSCUG00000016499)	EMC1 (ENSSCUG00000016423)	UBR4 (ENSSCUG00000016162)	PAX7 (ENSSCUG00000016080)
Australian saltwater crocodile	MODERN SPECIES	45	TMEM51 (ENSCPRG00005018581)	ENSCPRG00005018572	EFHD2 (ENSCPRG00005018569)	ENSCPRG00005018564	ENSCPRG00005018555	ENSCPRG00005018548	ENSCPRG00005018544	CASP9 (ENSCPRG00005018542)	DNAJC16 (ENSCPRG00005018539)	AGMAT (ENSCPRG00005018538)	PINK1 (ENSCPRG00005018537)	CDA (ENSCPRG00005018536)	ENSCPRG00005018533	MUL1 (ENSCPRG00005018532)	VWA5B1 (ENSCPRG00005018530)	ENSCPRG00005018526 #21	UBXN10 (ENSCPRG00005018523)	ENSCPRG00005018520	PLA2G2A (ENSCPRG00005018517)	PLA2G2D (ENSCPRG00005018515)	PLA2G2E (ENSCPRG00005018513)	OTUD3 (ENSCPRG00005018512)	RNF186 (ENSCPRG00005018510)	TMCO4 (ENSCPRG00005018509)	HTR6 (ENSCPRG00005018507)	NBL1 (ENSCPRG00005018506)	MICOS10 (ENSCPRG00005018504)	CAPZB (ENSCPRG00005018487)	SLC66A1 (ENSCPRG00005018480)	AKR7L (ENSCPRG00005018478)	MRTO4 (ENSCPRG00005018471)
Anura	ANCESTRAL SPECIES	44						ENSGT01030000234528.B.a.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000000911	ENSGT01050000244971.B	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT00940000154417 #21	ENSGT00390000012939	ENSGT00940000155096	ENSGT00940000161504	ENSGT00390000016392	ENSGT00960000190452	ENSGT00390000001400	ENSGT00940000154484.A	ENSGT00940000154209.b	ENSGT00390000005732	ENSGT00390000017957	ENSGT00390000003344	ENSGT00940000158496	ENSGT00390000006238	ENSGT00390000002461	ENSGT00600000084471
Frog	MODERN SPECIES	7	atp4a (ENSXETG00000006825)	tmem147 (ENSXETG00000044204)	casp9 (ENSXETG00000046355)	cela2a (ENSXETG00000006829)	ctrc (ENSXETG00000043366)	dnajc16 (ENSXETG00000006830)	agmat (ENSXETG00000025999)	cda (ENSXETG00000047477)	ENSXETG00000035783	fam43b (ENSXETG00000049229)	ENSXETG00000038212	mul1 (ENSXETG00000006837)	ENSXETG00000043180	CAMK2N1 (ENSXETG00000043755)	vwa5b1 (ENSXETG00000042828)	ddx19b (ENSXETG00000028097) #21	ENSXETG00000040911	otud3 (ENSXETG00000049262)	ubxn10 (ENSXETG00000044185)	pla2g2d (ENSXETG00000048297)	rnf186 (ENSXETG00000037048)	tmco4 (ENSXETG00000047481)	htr6 (ENSXETG00000032291)	nbl1 (ENSXETG00000043439)	micos10 (ENSXETG00000044996)	capzb (ENSXETG00000045318)	ENSXETG00000033370	XB5903316 [provisional:slc66a1] (ENSXETG00000017614)	mgc69309 (ENSXETG00000044703)	XB5947741 [provisional] (ENSXETG00000028096)	ENSXETG00000048592
Leishan spiny toad	MODERN SPECIES	2	ENSLLEG00000023247	ENSLLEG00000022907	ENSLLEG00000022852	CASP9 (ENSLLEG00000022781)	DNAJC16 (ENSLLEG00000022657)	AGMAT (ENSLLEG00000022587)	ENSLLEG00000022556	CDA (ENSLLEG00000022500)	ENSLLEG00000022436	ENSLLEG00000022353	ENSLLEG00000022321	MUL1 (ENSLLEG00000022269)	CAMK2N1 (ENSLLEG00000022217)	VWA5B1 (ENSLLEG00000022037)	ENSLLEG00000021933	ENSLLEG00000021722 #21	UBXN10 (ENSLLEG00000021654)	ENSLLEG00000021363	ENSLLEG00000021101	OTUD3 (ENSLLEG00000020996)	ENSLLEG00000020966	ENSLLEG00000020939	TMCO4 (ENSLLEG00000020814)	ENSLLEG00000020776	NBL1 (ENSLLEG00000020725)	MICOS10 (ENSLLEG00000020654)	CAPZB (ENSLLEG00000020153)	SLC66A1 (ENSLLEG00000018510)	AKR7L (ENSLLEG00000017702)	MRTO4 (ENSLLEG00000017540)	EMC1 (ENSLLEG00000017222)
Coelacanth	MODERN SPECIES	252	YBX1 (ENSLACG00000018135)	PPIH (ENSLACG00000018153)	ENSLACG00000018183	ela3l (ENSLACG00000018193)	ENSLACG00000018236	CASP9 (ENSLACG00000018259)	DNAJC16 (ENSLACG00000018275)	AGMAT (ENSLACG00000018305)	CDA (ENSLACG00000022185)	ENSLACG00000018329	ENSLACG00000018368	FAM43B (ENSLACG00000018434)	MUL1 (ENSLACG00000018453)	CAMK2N1 (ENSLACG00000018467)	VWA5B1 (ENSLACG00000018558)	ddx19b (ENSLACG00000018608) #21	UBXN10 (ENSLACG00000018613)	OTUD3 (ENSLACG00000018617)
Actinopterygii	DUPLICATION
Actinopterygii	ANCESTRAL SPECIES	227	ENSGT00390000004581	ENSGT00940000156670	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.A	ENSGT01050000244971.B	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00970000193437	ENSGT00940000154417.c #21	ENSGT00390000012939
Reedfish	MODERN SPECIES	16	kif17 (ENSECRG00000010637)	ENSECRG00000010625	ENSECRG00000010613	ephb2b (ENSECRG00000010579)	LACTBL1 (ENSECRG00000010557)	ENSECRG00000010501	ENSECRG00000010476	ENSECRG00000010473	ENSECRG00000010462	ENSECRG00000010445	alpl (ENSECRG00000010430)	ece1 (ENSECRG00000010411)	EIF4G3 (ENSECRG00000010358)	HP1BP3 (ENSECRG00000010318)	ENSECRG00000010297	ddx19a (ENSECRG00000010279) #21	ubxn10 (ENSECRG00000010262)	taf10 (ENSECRG00000010249)	ube2j2 (ENSECRG00000010231)	acap3b (ENSECRG00000010173)	PUSL1 (ENSECRG00000010119)	ENSECRG00000010110	ints11 (ENSECRG00000009949)	cptp (ENSECRG00000009886)	c1qtnf12 (ENSECRG00000009868)	tmem269 (ENSECRG00000009833)	gapdh (ENSECRG00000009820)	ENSECRG00000009808	USP48 (ENSECRG00000009784)	HSPG2 (ENSECRG00000009522)	casp9 (ENSECRG00000009432)
Neopterygii	ANCESTRAL SPECIES	148	ENSGT00390000004581	ENSGT00940000156670	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.A	ENSGT01050000244971.B.a	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00940000154417.c #21	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C	ENSGT00940000156199.b	ENSGT00940000156173	ENSGT00940000162229	ENSGT01010000222360.B
Osteoglossocephalai	ANCESTRAL SPECIES	34	ENSGT00940000156670	ENSGT00940000159698	ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00940000154417.c #21	ENSGT01060000249781	ENSGT00390000012939	ENSGT00940000165549	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Clupeocephala	ANCESTRAL SPECIES	41	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00940000159698	ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911.h.a	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT00990000208651	ENSGT00940000154417.c #21	ENSGT01060000249781	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b
Otomorpha	ANCESTRAL SPECIES	22			ENSGT00940000159698	ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911.h.a	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT00990000208651	ENSGT00940000154417.c #21	ENSGT01060000249781	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000156173	ENSGT00940000155356.c	ENSGT00940000158208.a.a	ENSGT00940000160351	ENSGT00940000158956.c	ENSGT00940000160722	ENSGT00940000154307.D	ENSGT00940000156890.a.a.s	ENSGT00940000160528.b
Clupeiformes	ANCESTRAL SPECIES	81	ENSGT01030000235094	ENSGT00950000183178.a	ENSGT00390000002174.a	ENSGT00940000159698	ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911.h.b.a	ENSGT00390000000911.h.a	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000156173	ENSGT00940000155356.c	ENSGT00940000158208.a.a	ENSGT00940000160351	ENSGT00940000158956.c	ENSGT00940000160722	ENSGT00940000154307.D	ENSGT00940000156890.a.a.s	ENSGT00940000160528.b	ENSGT00940000158675.a
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	1	tpx2 (ENSDCDG00000031899)	trappc6b (ENSDCDG00000031893)	plagx (ENSDCDG00000031888)	PAN2 (ENSDCDG00000031883)	ENSDCDG00000031879	agmat (ENSDCDG00000031866)	pink1 (ENSDCDG00000031862)	CDA (ENSDCDG00000031811)	ENSDCDG00000031800	ENSDCDG00000031571	fam43b (ENSDCDG00000031551)	ENSDCDG00000031549	ENSDCDG00000031546	ENSDCDG00000031543	ENSDCDG00000031540	ddx19a (ENSDCDG00000031536) #21	ENSDCDG00000031534	ACAP3 (ENSDCDG00000030628)	ube2j2 (ENSDCDG00000030591)	HIPK1 (ENSDCDG00000030589)	ormdl2 (ENSDCDG00000030585)	nemp1 (ENSDCDG00000030569)	casp9 (ENSDCDG00000030560)	agmat (ENSDCDG00000030547)	pink1 (ENSDCDG00000030545)	CDA (ENSDCDG00000030541)	ENSDCDG00000030540	ENSDCDG00000030364	fam43b (ENSDCDG00000030353)	ENSDCDG00000030352	mul1b (ENSDCDG00000030350)
Denticle herring	MODERN SPECIES	1	HIPK1 (ENSDCDG00000030589)	ormdl2 (ENSDCDG00000030585)	nemp1 (ENSDCDG00000030569)	casp9 (ENSDCDG00000030560)	agmat (ENSDCDG00000030547)	pink1 (ENSDCDG00000030545)	CDA (ENSDCDG00000030541)	ENSDCDG00000030540	ENSDCDG00000030364	fam43b (ENSDCDG00000030353)	ENSDCDG00000030352	mul1b (ENSDCDG00000030350)	ENSDCDG00000030346	ENSDCDG00000030345	ENSDCDG00000030341	ddx19a (ENSDCDG00000030295) #21	cptp (ENSDCDG00000030270)	ENSDCDG00000030267	ints11 (ENSDCDG00000030251)	ENSDCDG00000030240	ACAP3 (ENSDCDG00000028692)	ube2j2 (ENSDCDG00000028638)	HIPK1 (ENSDCDG00000028633)	cbln4 (ENSDCDG00000028628)	ENSDCDG00000028627	PFDN4 (ENSDCDG00000028624)	znf217 (ENSDCDG00000028602)	ENSDCDG00000028599	ENSDCDG00000028595	TSHZ2 (ENSDCDG00000028593)	ZFP64 (ENSDCDG00000028590)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000001098	ENSCHAG00000001083	ormdl2 (ENSCHAG00000001057)	nemp1 (ENSCHAG00000000986)	casp9 (ENSCHAG00000000630)	DNAJC16 (ENSCHAG00000000392)	agmat (ENSCHAG00000000316)	agmat (ENSCHAG00000000265)	pink1 (ENSCHAG00000000230)	cdaa (ENSCHAG00000000214)	ENSCHAG00000000200	ENSCHAG00000000149	fam43b (ENSCHAG00000000136)	mul1b (ENSCHAG00000000124)	CAMK2N1 (ENSCHAG00000000119)	ddx19a (ENSCHAG00000027535) #21	ubxn10 (ENSCHAG00000027530)	cptp (ENSCHAG00000027528)	cptp (ENSCHAG00000027527)	ints11 (ENSCHAG00000027520)	ENSCHAG00000027517	ACAP3 (ENSCHAG00000027379)	ube2j2 (ENSCHAG00000027342)	HIPK1 (ENSCHAG00000027223)	MARCHF9 (ENSCHAG00000027201)	tspan31 (ENSCHAG00000027200)	agap2 (ENSCHAG00000027181)	ZBTB39 (ENSCHAG00000027174)	gpr182 (ENSCHAG00000027173)	pip4k2ca (ENSCHAG00000027154)	igfbp6b (ENSCHAG00000027146)
Otophysi	ANCESTRAL SPECIES	77					ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911.h.a	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT00990000208651	ENSGT00940000154417.c #21	ENSGT01060000249781	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b.c	ENSGT00940000156173.f	ENSGT00940000155356.c	ENSGT00940000158208.a.a	ENSGT00940000160351	ENSGT00940000158956.c	ENSGT00940000160722	ENSGT00940000154307.D	ENSGT00940000156890.a.a.s	ENSGT00940000160528.b
Characiphysae	ANCESTRAL SPECIES	16	ENSGT00950000182941.a.a.a.a	ENSGT00950000182985.b.a	ENSGT00390000004348	ENSGT00950000183117.b	ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911.h.a	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT00940000176954	ENSGT00940000154417.c #21	ENSGT01060000249781	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644.k	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b.c	ENSGT00940000158208.a.a	ENSGT00940000158956.c	ENSGT00940000160722	ENSGT00940000154307.D.d	ENSGT00940000156890.a.a.s	ENSGT00940000160528.b	ENSGT00940000158675.a	ENSGT00940000158313.a.b	ENSGT01000000222029
Characiphysae_b	ANCESTRAL SPECIES	8	ENSGT00950000182941.a.a.a.a	ENSGT00950000182985.b.a	ENSGT00390000004348	ENSGT00950000183117.b	ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911.h.a	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT00940000176954	ENSGT00940000154417.c #21	ENSGT01060000249781	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644.k	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b.c	ENSGT00940000158208.a.a	ENSGT00940000158956.c	ENSGT00940000160722	ENSGT00940000154307.D.d	ENSGT00940000156890.a.a.s	ENSGT00940000160528.b	ENSGT00940000158675.a	ENSGT00940000158313.a.b	ENSGT00540000073797
Characoidei	ANCESTRAL SPECIES	8	ENSGT00950000182941.a.a.a.a	ENSGT00950000182985.b.a	ENSGT00390000004348	ENSGT00950000183117.b	ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911.h.a	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT00940000176954	ENSGT00940000154417.c #21	ENSGT01060000249781	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644.k	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b.c	ENSGT00940000155356.c	ENSGT00940000158208.a.a	ENSGT00940000158956.c	ENSGT00940000160722	ENSGT00940000154307.D.d	ENSGT00940000156890.a.a.s	ENSGT00940000160528.b	ENSGT00940000158675.a	ENSGT00940000158313.a.b
Red-bellied piranha	MODERN SPECIES	134	ENSPNAG00000022732	ppp1r14c (ENSPNAG00000022649)	iyd (ENSPNAG00000022631)	selenoi (ENSPNAG00000022609)	DNAJC16 (ENSPNAG00000022574)	agmat (ENSPNAG00000022490)	pink1 (ENSPNAG00000022461)	cdaa (ENSPNAG00000022445)	cdaa (ENSPNAG00000022416)	ENSPNAG00000022405	ENSPNAG00000022398	fam43b (ENSPNAG00000022389)	mul1b (ENSPNAG00000022374)	CAMK2N1 (ENSPNAG00000022326)	VWA5B1 (ENSPNAG00000022312)	ddx19a (ENSPNAG00000022254) #21	ENSPNAG00000022242	ubxn10 (ENSPNAG00000022225)	cptp (ENSPNAG00000022219)	ints11 (ENSPNAG00000022204)	ENSPNAG00000022136	HIPK1 (ENSPNAG00000022109)	MARCHF9 (ENSPNAG00000022027)	tspan31 (ENSPNAG00000022011)	agap2 (ENSPNAG00000021981)	ENSPNAG00000021903	gpr182 (ENSPNAG00000021896)	pip4k2ca (ENSPNAG00000021892)	igfbp6b (ENSPNAG00000021849)	spryd3 (ENSPNAG00000021834)	lima1a (ENSPNAG00000021800)
Mexicana tetra	MODERN SPECIES	6	ENSAMXG00000041374	ppp1r14c (ENSAMXG00000037953)	selenoi (ENSAMXG00000042381)	iyd (ENSAMXG00000030031)	DNAJC16 (ENSAMXG00000018083)	agmat (ENSAMXG00000030343)	pink1 (ENSAMXG00000038123)	cdaa (ENSAMXG00000034539)	ENSAMXG00000042708	ENSAMXG00000008981	fam43b (ENSAMXG00000024828)	mul1b (ENSAMXG00000036074)	CAMK2N1 (ENSAMXG00000032815)	VWA5B1 (ENSAMXG00000032840)	ENSAMXG00000034791	ddx19a (ENSAMXG00000015325) #21	ubxn10 (ENSAMXG00000038725)	ednrab (ENSAMXG00000035645)	ENSAMXG00000031053	ENSAMXG00000039043	ENSAMXG00000032583	CAMTA1 (ENSAMXG00000013350)	uts2a (ENSAMXG00000039258)	ENSAMXG00000042124	tnfrsf9a (ENSAMXG00000029430)	DVL1 (ENSAMXG00000013328)	mxra8b (ENSAMXG00000039312)	aurkaip1 (ENSAMXG00000013317)	slc25a33 (ENSAMXG00000013308)	tmem201 (ENSAMXG00000013301)	pik3cd (ENSAMXG00000013276)
Electric eel	MODERN SPECIES	30	ENSEEEG00000002189	ppp1r14c (ENSEEEG00000002188)	iyd (ENSEEEG00000002187)	selenoi (ENSEEEG00000002133)	DNAJC16 (ENSEEEG00000002127)	agmat (ENSEEEG00000002126)	pink1 (ENSEEEG00000002120)	cdaa (ENSEEEG00000002115)	ENSEEEG00000001920	ENSEEEG00000001877	fam43b (ENSEEEG00000001871)	mul1b (ENSEEEG00000001870)	CAMK2N1 (ENSEEEG00000001868)	VWA5B1 (ENSEEEG00000001867)	ENSEEEG00000001864	ddx19a (ENSEEEG00000001851) #21	ubxn10 (ENSEEEG00000001848)	cptp (ENSEEEG00000001847)	ints11 (ENSEEEG00000001818)	ACAP3 (ENSEEEG00000001768)	ube2j2 (ENSEEEG00000001758)	ENSEEEG00000001756	MARCHF9 (ENSEEEG00000001755)	tspan31 (ENSEEEG00000001753)	agap2 (ENSEEEG00000001068)	ZBTB39 (ENSEEEG00000001004)	ENSEEEG00000001003	pip4k2ca (ENSEEEG00000000379)	igfbp6b (ENSEEEG00000000036)	spryd3 (ENSEEEG00000020407)	lima1a (ENSEEEG00000020401)
Channel catfish	MODERN SPECIES	6	ENSIPUG00000000639	Ppp1r14c (ENSIPUG00000000630)	iyd (ENSIPUG00000000621)	EPT1 (ENSIPUG00000000603)	DNAJC16 (ENSIPUG00000000579)	agmat (ENSIPUG00000000576)	pink1 (ENSIPUG00000000561)	cda (ENSIPUG00000022850)	ENSIPUG00000022847	ENSIPUG00000022843	fam43b (ENSIPUG00000022841)	mul1 (ENSIPUG00000022833)	camk2n2 (ENSIPUG00000022831)	VWA5B1 (ENSIPUG00000022816)	ENSIPUG00000022813	ddx19a (ENSIPUG00000022795) #21	ubxn10 (ENSIPUG00000022791)	gltpd1 (ENSIPUG00000022788)	ENSIPUG00000022782	cpsf3l (ENSIPUG00000022761)	ACAP3 (ENSIPUG00000022719)	ube2j2 (ENSIPUG00000022702)	HIPK1 (ENSIPUG00000022675)	March9 (ENSIPUG00000022666)	tspan31 (ENSIPUG00000022638)	Agap1 (ENSIPUG00000022628)	zbtb39 (ENSIPUG00000022627)	gpr182 (ENSIPUG00000022625)	gpr182 (ENSIPUG00000022623)	ENSIPUG00000022621	pip4k2c (ENSIPUG00000022593)
Cyprinoidei	ANCESTRAL SPECIES		ENSGT00510000046843.a.b.k	ENSGT00950000182888.a.a.a.g.a	ENSGT00950000182888.a.a.a.g.b.a	ENSGT00950000182888.a.a.a.g.b.b	ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911.h.a	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT00990000208651	ENSGT00940000154417.c #21	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644.m.a	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b.c	ENSGT00940000156173.f	ENSGT00940000155356.c	ENSGT00940000158208.a.a	ENSGT00940000160351	ENSGT00940000158956.c	ENSGT00940000160722	ENSGT00940000154307.D	ENSGT00940000156890.a.a.s	ENSGT00940000160528.b	ENSGT00940000158675.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	3	ENSGT00940000165935.d.a	ENSGT00950000183003.a.b.c.b	ENSGT00510000046843.a.b.k.c	ENSGT00950000182888.a.a.a.g.b.b.b	ENSGT00940000155851.c.a.a	ENSGT00950000183195.a	ENSGT00390000001206.c.a	ENSGT00390000000911.h.a.d.b	ENSGT00390000000911.h.a.d.a.a	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b.d	ENSGT00940000162826.d	ENSGT00390000012141.b.g	ENSGT00390000004940.a.b.j.a.a	ENSGT00940000158938.a.b	ENSGT00940000154417.c.c #21	ENSGT00990000208651.c.b	ENSGT00940000165549.c	ENSGT00940000157644.m.a.b	ENSGT01100000263537.b.a.a.a.b.d	ENSGT00940000156199.a.b.c.b	ENSGT00940000156173.f.a	ENSGT00940000155356.c.g	ENSGT00940000158208.a.a.b	ENSGT00940000160351.g	ENSGT00940000158956.c.f	ENSGT00940000160722.c	ENSGT00940000154307.D.b	ENSGT00940000156890.a.a.s.c	ENSGT00940000160528.b.b	ENSGT00940000158675.a.b
Cyprininae_a	ANCESTRAL SPECIES	5	ENSGT00950000183003.a.b.c.b	ENSGT00510000046843.a.b.k.c	ENSGT00950000182888.a.a.a.g.b.b.b	ENSGT00950000182888.a.a.a.g.b.b.a	ENSGT00940000155851.c.a.a	ENSGT00950000183195.a	ENSGT00390000001206.c.a	ENSGT00390000000911.h.a.d.b	ENSGT00390000000911.h.a.d.a.a	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b.d	ENSGT00940000162826.d	ENSGT00390000012141.b.g	ENSGT00390000004940.a.b.j.a.a	ENSGT00940000158938.a.b	ENSGT00940000154417.c.c #21	ENSGT00990000208651.c.b	ENSGT00940000165549.c	ENSGT00940000157644.m.a.b	ENSGT01100000263537.b.a.a.a.b.d	ENSGT00940000156199.a.b.c.b	ENSGT00940000156173.f.a	ENSGT00940000155356.c.g	ENSGT00940000158208.a.a.b	ENSGT00940000160351.g	ENSGT00940000158956.c.f	ENSGT00940000160722.c	ENSGT00940000154307.D.b	ENSGT00940000156890.a.a.s.c	ENSGT00940000160528.b.b	ENSGT00940000158675.a.b
Common carp reference	MODERN SPECIES	49	cd40 (ENSCCRG00000025626)	irx7 (ENSCCRG00000025619)	ENSCCRG00000054445	ENSCCRG00000074156	tor1l1 (ENSCCRG00000064225)	tor1l1 (ENSCCRG00000031360)	ENSCCRG00000050482	agmat (ENSCCRG00000050467)	pink1 (ENSCCRG00000031337)	cdaa (ENSCCRG00000081555)	ENSCCRG00000063521	ENSCCRG00000004822	fam43b (ENSCCRG00000053024)	mul1b (ENSCCRG00000044722)	VWA5B1 (ENSCCRG00000063965)	ddx19a (ENSCCRG00000004649) #21	ENSCCRG00000082213	cptp (ENSCCRG00000077753)	ints11 (ENSCCRG00000023890)	ENSCCRG00000069861	ACAP3 (ENSCCRG00000024019)	ube2j2 (ENSCCRG00000041783)	ENSCCRG00000041778	MARCHF9 (ENSCCRG00000068017)	tspan31 (ENSCCRG00000072687)	agap2 (ENSCCRG00000034027)	ENSCCRG00000081997	gpr182 (ENSCCRG00000074891)	pip4k2ca (ENSCCRG00000042958)	spryd3 (ENSCCRG00000044897)	igfbp6b (ENSCCRG00000044886)
Golden-line barbel	MODERN SPECIES	856							cdaa (ENSSGRG00000027784)	pink1 (ENSSGRG00000027817)	cdaa (ENSSGRG00000027827)	cdaa (ENSSGRG00000027834)	ENSSGRG00000027835	ENSSGRG00000027847	fam43b (ENSSGRG00000027850)	mul1b (ENSSGRG00000027853)	CAMK2N1 (ENSSGRG00000027855)	ddx19a (ENSSGRG00000027871) #21	ENSSGRG00000027910	ubxn10 (ENSSGRG00000027912)	LRFN2 (ENSSGRG00000027918)	ENSSGRG00000027921	ENSSGRG00000027925	slc16a10 (ENSSGRG00000027935)	rpf2 (ENSSGRG00000027938)	akirin2 (ENSSGRG00000028239)	syncrip (ENSSGRG00000028242)	ENSSGRG00000028357	ENSSGRG00000028358	ENSSGRG00000028362	gjb7 (ENSSGRG00000028363)	znf292b (ENSSGRG00000028364)	HTR1E (ENSSGRG00000028365)
Goldfish	MODERN SPECIES	15	ENSCARG00000008401	ENSCARG00000008390	itchb (ENSCARG00000008357)	E2F1 (ENSCARG00000008338)	ctnnbl1 (ENSCARG00000007571)	VSTM2L (ENSCARG00000007524)	TTI1 (ENSCARG00000007513)	rprd1b (ENSCARG00000007475)	ENSCARG00000007461	ENSCARG00000007450	ENSCARG00000007416	ENSCARG00000007375	ENSCARG00000007144	ENSCARG00000007018	ENSCARG00000006979	ddx19a (ENSCARG00000006775) #21	ENSCARG00000006752	cptp (ENSCARG00000006744)	ints11 (ENSCARG00000006294)	ENSCARG00000006201	ACAP3 (ENSCARG00000004868)	ube2j2 (ENSCARG00000004772)	HIPK1 (ENSCARG00000004742)	MARCHF9 (ENSCARG00000004729)	tspan31 (ENSCARG00000004699)	agap2 (ENSCARG00000004652)	ZBTB39 (ENSCARG00000004627)	gpr182 (ENSCARG00000004623)	pip4k2ca (ENSCARG00000004132)	igfbp6b (ENSCARG00000004051)	spryd3 (ENSCARG00000003870)
Cyprininae	ANCESTRAL SPECIES	417								ENSGT00940000155851.c.a.b	ENSGT00390000001206.c.b	ENSGT00390000000911.h.a.c.a	ENSGT01050000244971.B.b.c	ENSGT00940000162826.c	ENSGT00390000012141.b.h	ENSGT00390000004940.a.b.j.a.b	ENSGT00940000158938.a.a	ENSGT00940000154417.c.d #21	ENSGT00390000012939	ENSGT00940000165549.d	ENSGT00940000157644.m.a.a	ENSGT01100000263537.b.a.a.a.b.c	ENSGT00940000156199.a.b.c.a	ENSGT00940000156173.f.b	ENSGT00940000155356.c.h	ENSGT00940000158208.a.a.a	ENSGT00940000160351.h	ENSGT00940000158956.c.e	ENSGT00940000160722.d	ENSGT00940000154307.D.a	ENSGT00940000156890.a.a.s.d	ENSGT00940000160528.b.a	ENSGT00940000158675.a.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	42	ENSCARG00000038149	cbx5 (ENSCARG00000038125)	ENSCARG00000038105	nfe2 (ENSCARG00000038098)	cd40 (ENSCARG00000038094)	irx7 (ENSCARG00000038085)	ENSCARG00000038078	ENSCARG00000038072	pink1 (ENSCARG00000038064)	cdaa (ENSCARG00000038002)	ENSCARG00000066932	mul1b (ENSCARG00000066923)	CAMK2N1 (ENSCARG00000066918)	VWA5B1 (ENSCARG00000066907)	ENSCARG00000066892	ddx19a (ENSCARG00000066542) #21	ubxn10 (ENSCARG00000066508)	cptp (ENSCARG00000066501)	INTS11 (ENSCARG00000066488)	ACAP3 (ENSCARG00000064666)	ube2j2 (ENSCARG00000064456)	HIPK1 (ENSCARG00000064199)	MARCHF9 (ENSCARG00000064140)	tspan31 (ENSCARG00000064096)	agap2 (ENSCARG00000063898)	ZBTB39 (ENSCARG00000063870)	gpr182 (ENSCARG00000063863)	pip4k2ca (ENSCARG00000063515)	igfbp6b (ENSCARG00000063462)	spryd3 (ENSCARG00000063287)	lima1a (ENSCARG00000063248)
Goldfish	MODERN SPECIES	352														CAMK2N1 (ENSCARG00000058981)	VWA5B1 (ENSCARG00000058994)	ddx19a (ENSCARG00000059016) #21	ENSCARG00000059061
Cyprininae_a	ANCESTRAL SPECIES	17					ENSGT00940000155851.c.a.b	ENSGT00390000001206.c.b	ENSGT00390000000911.h.a.c.a	ENSGT01050000244971.B.b.c	ENSGT00940000162826.c	ENSGT00390000012141.b.h	ENSGT00390000004940.a.b.j.a.b	ENSGT00940000158938.a.a	ENSGT00990000208651.d	ENSGT00940000158938.b	ENSGT00990000208651.c.a	ENSGT00940000154417.c.d #21	ENSGT00390000012939	ENSGT00940000165549.d	ENSGT00940000157644.m.a.a	ENSGT01100000263537.b.a.a.a.b.c	ENSGT00940000156199.a.b.c.a	ENSGT00940000156173.f.b	ENSGT00940000155356.c.h	ENSGT00940000158208.a.a.a	ENSGT00940000160351.h	ENSGT00940000158956.c.e	ENSGT00940000160722.d	ENSGT00940000154307.D.a	ENSGT00940000156890.a.a.s.d	ENSGT00940000160528.b.a	ENSGT00940000158675.a.a
Common carp reference	MODERN SPECIES	11	ENSCCRG00000075720	cd40 (ENSCCRG00000006461)	irx7 (ENSCCRG00000080838)	ENSCCRG00000044196	ENSCCRG00000031369	ENSCCRG00000062669	ENSCCRG00000031346	pink1 (ENSCCRG00000033003)	cdaa (ENSCCRG00000080631)	ENSCCRG00000031334	fam43b (ENSCCRG00000067761)	mul1b (ENSCCRG00000070697)	CAMK2N1 (ENSCCRG00000074121)	VWA5B1 (ENSCCRG00000004772)	ENSCCRG00000044716	ddx19a (ENSCCRG00000070437) #21	ubxn10 (ENSCCRG00000044699)	ints11 (ENSCCRG00000044684)	ENSCCRG00000078287	ENSCCRG00000041818	ENSCCRG00000030994	MARCHF9 (ENSCCRG00000030987)	tspan31 (ENSCCRG00000059738)	agap2 (ENSCCRG00000033838)	ENSCCRG00000030117	gpr182 (ENSCCRG00000081129)	pip4k2ca (ENSCCRG00000030109)	igfbp6b (ENSCCRG00000030106)	spryd3 (ENSCCRG00000056559)	zgc:174906 (ENSCCRG00000050402)	ENSCCRG00000026777
Golden-line barbel	MODERN SPECIES	12	cd40 (ENSSGRG00000028203)	irx7 (ENSSGRG00000028202)	ENSSGRG00000028201	PLEKHG5 (ENSSGRG00000028199)	tor1l3 (ENSSGRG00000028197)	ENSSGRG00000028196	DNAJC16 (ENSSGRG00000028195)	agmat (ENSSGRG00000028193)	cdaa (ENSSGRG00000028188)	ENSSGRG00000028185	ENSSGRG00000028183	mul1b (ENSSGRG00000028180)	CAMK2N1 (ENSSGRG00000028179)	VWA5B1 (ENSSGRG00000028177)	ENSSGRG00000028176	ddx19a (ENSSGRG00000027318) #21	ubxn10 (ENSSGRG00000027310)	cptp (ENSSGRG00000027308)	ints11 (ENSSGRG00000026652)	ACAP3 (ENSSGRG00000024622)	ube2j2 (ENSSGRG00000024588)	HIPK1 (ENSSGRG00000024586)	ENSSGRG00000024585	tspan31 (ENSSGRG00000024583)	agap2 (ENSSGRG00000024581)	gpr182 (ENSSGRG00000024579)	ZBTB39 (ENSSGRG00000024578)	pip4k2ca (ENSSGRG00000024535)	igfbp6b (ENSSGRG00000024524)	spryd3 (ENSSGRG00000024523)	lima1a (ENSSGRG00000024522)
Zebrafish	MODERN SPECIES	15	cd40 (ENSDARG00000054968)	irx7 (ENSDARG00000002601)	PLEKHG5 (ENSDARG00000101752)	tor1l3 (ENSDARG00000026895)	ENSDARG00000090741	tor1l1 (ENSDARG00000055856)	DNAJC16 (ENSDARG00000059699)	agmat (ENSDARG00000059700)	pink1 (ENSDARG00000001929)	cdaa (ENSDARG00000111188)	ENSDARG00000038891	ENSDARG00000116457	fam43b (ENSDARG00000070222)	mul1b (ENSDARG00000052527)	ENSDARG00000059705	ddx19a (ENSDARG00000044325) #21	ubxn10 (ENSDARG00000052535)	cptp (ENSDARG00000052537)	ints11 (ENSDARG00000025212)	ACAP3 (ENSDARG00000075990)	ube2j2 (ENSDARG00000061161)	ENSDARG00000063594	MARCHF9 (ENSDARG00000055740)	tspan31 (ENSDARG00000074554)	ENSDARG00000114281	agap2 (ENSDARG00000099874)	ENSDARG00000019265	gpr182 (ENSDARG00000036616)	pip4k2ca (ENSDARG00000031020)	igfbp6b (ENSDARG00000090833)	spryd3 (ENSDARG00000101982)
Euteleosteomorpha	ANCESTRAL SPECIES	2	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00940000159698	ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911.h.a	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00990000208651	ENSGT00940000154417.c #21	ENSGT01060000249781	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b
Acanthomorphata	ANCESTRAL SPECIES	3	ENSGT01010000222933	ENSGT00940000155610.o.a	ENSGT00390000008152.A	ENSGT00940000156670	ENSGT00940000159698	ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000176954	ENSGT00940000154417.c #21	ENSGT01060000249781	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	2	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT01010000222933	ENSGT00940000156670	ENSGT00940000159698	ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000176954	ENSGT00940000154417.c #21	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b	ENSGT00950000183003.a.b
Percomorphaceae	ANCESTRAL SPECIES	7	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT01010000222933	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000176954	ENSGT00940000154417.c #21	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b	ENSGT00950000183003.a.b
Tiger tail seahorse	MODERN SPECIES	404										rgs19 (ENSHCOG00000012928)	tcea2 (ENSHCOG00000012964)	SOX18 (ENSHCOG00000012982)	ENSHCOG00000012987	xkr7b (ENSHCOG00000012995)	VWA5B1 (ENSHCOG00000013048)	ddx19a (ENSHCOG00000013061) #21	ENSHCOG00000013070	cptp (ENSHCOG00000013078)	ints11 (ENSHCOG00000013135)	ENSHCOG00000013149	tnnc1b (ENSHCOG00000013163)	dedd (ENSHCOG00000013166)	ENSHCOG00000013183	mfn2 (ENSHCOG00000013229)	ENSHCOG00000013242	ENSHCOG00000013253	MYT1 (ENSHCOG00000013298)	porcnl (ENSHCOG00000013323)	suv39h1b (ENSHCOG00000013337)	ENSHCOG00000013355	VPS13D (ENSHCOG00000013482)
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT01010000222933	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT01010000222933	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00990000204522	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00990000204522	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Ballan wrasse	MODERN SPECIES	395															VWA5B1 (ENSLBEG00000011249)	ddx19a (ENSLBEG00000011290) #21	ENSLBEG00000011315	ubxn10 (ENSLBEG00000011356)	cptp (ENSLBEG00000011367)	ints11 (ENSLBEG00000011392)	ENSLBEG00000011463	ENSLBEG00000011487	ACAP3 (ENSLBEG00000011598)	HIPK1 (ENSLBEG00000011815)	sdf4 (ENSLBEG00000011894)	c1qtnf12 (ENSLBEG00000011929)	olfml3a (ENSLBEG00000011975)	SYT6 (ENSLBEG00000012074)	klhl21 (ENSLBEG00000012128)	ZBTB48 (ENSLBEG00000012151)	NOL9 (ENSLBEG00000012187)
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00990000204522	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Perciformes	ANCESTRAL SPECIES	4	ENSGT00940000167346	ENSGT00990000204522	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00940000154457.a.a.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Cottioidei	ANCESTRAL SPECIES	2	ENSGT00990000203957	ENSGT00940000167346	ENSGT00990000204522	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Lumpfish	MODERN SPECIES	22	ENSCLMG00005002775	ptpn22 (ENSCLMG00005002778)	RSBN1 (ENSCLMG00005002784)	ENSCLMG00005002888	tmem269 (ENSCLMG00005002948)	HSPG2 (ENSCLMG00005003076)	agmat (ENSCLMG00005003634)	ENSCLMG00005003638	pink1 (ENSCLMG00005003639)	ENSCLMG00005003640	ENSCLMG00005003646	fam43b (ENSCLMG00005003696)	ENSCLMG00005003697	mul1b (ENSCLMG00005003699)	ENSCLMG00005003701	ddx19a (ENSCLMG00005003703) #21	ENSCLMG00005003779	ubxn10 (ENSCLMG00005003780)	cptp (ENSCLMG00005003781)	ints11 (ENSCLMG00005003784)	ENSCLMG00005003789	ENSCLMG00005003792	ACAP3 (ENSCLMG00005003803)	HIPK1 (ENSCLMG00005005338)	sdf4 (ENSCLMG00005005360)	c1qtnf12 (ENSCLMG00005005363)	olfml3a (ENSCLMG00005005364)	SYT6 (ENSCLMG00005005366)	klhl21 (ENSCLMG00005005558)	ZBTB48 (ENSCLMG00005005560)	NOL9 (ENSCLMG00005005572)
Stickleback	MODERN SPECIES	11	pfkfb1 (ENSGACG00000011410)	ENSGACG00000011406	gdi1 (ENSGACG00000011384)	atp6ap1b (ENSGACG00000011378)	taf8 (ENSGACG00000011366)	camk1gb (ENSGACG00000011358)	mical1 (ENSGACG00000011353)	src (ENSGACG00000011349)	ENSGACG00000011345	pink1 (ENSGACG00000011338)	ENSGACG00000011331	ENSGACG00000011309	fam43b (ENSGACG00000011306)	mul1b (ENSGACG00000011302)	VWA5B1 (ENSGACG00000011296)	ddx19a (ENSGACG00000011283) #21	cptp (ENSGACG00000011282)	ints11 (ENSGACG00000011260)	ENSGACG00000011257	ENSGACG00000011252	ACAP3 (ENSGACG00000011244)	HIPK1 (ENSGACG00000011240)	sdf4 (ENSGACG00000011217)	c1qtnf12 (ENSGACG00000011209)	olfml3a (ENSGACG00000011204)	SYT6 (ENSGACG00000011194)	klhl21 (ENSGACG00000011193)	ZBTB48 (ENSGACG00000011187)	ENSGACG00000011186	NOL9 (ENSGACG00000011178)	PLEKHG5 (ENSGACG00000011168)
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00940000163310.k.a	ENSGT00990000203957	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00940000154457.a.a.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b
Pike perch	MODERN SPECIES	84	ENSSLUG00000007224	ENSSLUG00000007232	ENSSLUG00000007237	RSBN1 (ENSSLUG00000007252)	MAGI3 (ENSSLUG00000007276)	tmem269 (ENSSLUG00000007298)	HSPG2 (ENSSLUG00000007598)	agmat (ENSSLUG00000011498)	ENSSLUG00000011510	pink1 (ENSSLUG00000011518)	ENSSLUG00000011524	ENSSLUG00000011535	fam43b (ENSSLUG00000011564)	ENSSLUG00000011570	mul1b (ENSSLUG00000011576)	ddx19a (ENSSLUG00000011605) #21	ENSSLUG00000011905	ubxn10 (ENSSLUG00000011909)	cptp (ENSSLUG00000011912)	ints11 (ENSSLUG00000011957)	ENSSLUG00000012019	ACAP3 (ENSSLUG00000012120)	HIPK1 (ENSSLUG00000013815)	sdf4 (ENSSLUG00000014148)	c1qtnf12 (ENSSLUG00000014160)	mrps28 (ENSSLUG00000014172)	olfml3a (ENSSLUG00000014179)	SYT6 (ENSSLUG00000014190)	klhl21 (ENSSLUG00000014194)	ZBTB48 (ENSSLUG00000014208)	NOL9 (ENSSLUG00000014356)
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000182252	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Gilthead seabream	MODERN SPECIES	21	ENSSAUG00010015163	ptpn22 (ENSSAUG00010015167)	RSBN1 (ENSSAUG00010015170)	MAGI3 (ENSSAUG00010015177)	ENSSAUG00010000313	tmem269 (ENSSAUG00010000322)	ENSSAUG00010000329	ENSSAUG00010000533	agmat (ENSSAUG00010000543)	ENSSAUG00010000547	pink1 (ENSSAUG00010000554)	ENSSAUG00010000559	ENSSAUG00010000564	fam43b (ENSSAUG00010000566)	mul1b (ENSSAUG00010000570)	ddx19a (ENSSAUG00010000580) #21	ENSSAUG00010000689	ubxn10 (ENSSAUG00010000691)	cptp (ENSSAUG00010000694)	ints11 (ENSSAUG00010000702)	ENSSAUG00010000711	ENSSAUG00010000714	ACAP3 (ENSSAUG00010000789)	HIPK1 (ENSSAUG00010003463)	sdf4 (ENSSAUG00010003466)	c1qtnf12 (ENSSAUG00010003468)	olfml3a (ENSSAUG00010003470)	SYT6 (ENSSAUG00010003473)	klhl21 (ENSSAUG00010003474)	ZBTB48 (ENSSAUG00010003477)	NOL9 (ENSSAUG00010003479)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	15	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000182252	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
European seabass	MODERN SPECIES	14	ENSDLAG00005007164	ENSDLAG00005007109	tmem269 (ENSDLAG00005033560)	ENSDLAG00005007059	ENSDLAG00005005230	ENSDLAG00005034676	pink1 (ENSDLAG00005005097)	ENSDLAG00005003041	ENSDLAG00005005083	ENSDLAG00005005079	ENSDLAG00005018220	fam43b (ENSDLAG00005035031)	mul1b (ENSDLAG00005018207)	VWA5B1 (ENSDLAG00005018179)	ENSDLAG00005018157	ddx19a (ENSDLAG00005030712) #21	ubxn10 (ENSDLAG00005030302)	cptp (ENSDLAG00005027641)	ENSDLAG00005017175	ENSDLAG00005017173	ints11 (ENSDLAG00005017195)	ACAP3 (ENSDLAG00005015247)	ENSDLAG00005015187	sdf4 (ENSDLAG00005015148)	c1qtnf12 (ENSDLAG00005015129)	olfml3a (ENSDLAG00005030589)	ENSDLAG00005027484	klhl21 (ENSDLAG00005034360)	ZBTB48 (ENSDLAG00005015076)	NOL9 (ENSDLAG00005015048)	PLEKHG5 (ENSDLAG00005014831)
Large yellow croaker	MODERN SPECIES	487	fitm2 (ENSLCRG00005001123)	jph2 (ENSLCRG00005001125)	tuba1b (ENSLCRG00005001131)	sarnp (ENSLCRG00005001134)	pmelb (ENSLCRG00005001137)	ENSLCRG00005001139	ENSLCRG00005001154	ENSLCRG00005001233	pink1 (ENSLCRG00005001235)	ENSLCRG00005001236	ENSLCRG00005001239	ENSLCRG00005001242	fam43b (ENSLCRG00005001243)	mul1b (ENSLCRG00005001246)	VWA5B1 (ENSLCRG00005001248)	ddx19a (ENSLCRG00005001251) #21	ENSLCRG00005001257	ubxn10 (ENSLCRG00005001259)	cptp (ENSLCRG00005001260)	ints11 (ENSLCRG00005001265)	ENSLCRG00005001286	ACAP3 (ENSLCRG00005001371)	ccnt1 (ENSLCRG00005008281)	ccnt1 (ENSLCRG00005008283)	kansl2 (ENSLCRG00005008290)	ENSLCRG00005008304	TMBIM6 (ENSLCRG00005008305)	ctdsp2 (ENSLCRG00005008307)	SLC11A2 (ENSLCRG00005008308)	ENSLCRG00005008341	MARCHF9 (ENSLCRG00005008940)
Tetraodontidae	ANCESTRAL SPECIES	2	ENSGT00940000159411.b	ENSGT00390000002944	ENSGT00950000183188.A.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00650000094883	ENSGT00940000163908	ENSGT00940000159233	ENSGT01050000244882.b.c.b.b	ENSGT00530000063168.a.a.b	ENSGT00940000155170
Tetraodon	MODERN SPECIES	24	sarnp (ENSTNIG00000012432)	pmelb (ENSTNIG00000012431)	ENSTNIG00000012430	ENSTNIG00000001018	ENSTNIG00000012428	ENSTNIG00000012427	tmem269 (ENSTNIG00000012426)	HSPG2 (ENSTNIG00000012425)	agmat (ENSTNIG00000012424)	pink1 (ENSTNIG00000012423)	ENSTNIG00000012422	ENSTNIG00000012421	fam43b (ENSTNIG00000012420)	mul1b (ENSTNIG00000012419)	VWA5B1 (ENSTNIG00000012418)	ddx19a (ENSTNIG00000012417) #21	cptp (ENSTNIG00000012416)	ints11 (ENSTNIG00000012415)	ENSTNIG00000012414	ACAP3 (ENSTNIG00000012413)	HIPK1 (ENSTNIG00000012412)	c1qtnf12 (ENSTNIG00000012411)	olfml3a (ENSTNIG00000012410)	SYT6 (ENSTNIG00000012409)	edem2 (ENSTNIG00000012408)	AVPR2 (ENSTNIG00000012407)	FAM120C (ENSTNIG00000012406)	hsd17b10 (ENSTNIG00000012405)	ENSTNIG00000006512	ccnq (ENSTNIG00000006513)	zgc:101663 (ENSTNIG00000006514)
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT01010000222933	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00990000204522	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Anabantoidei	ANCESTRAL SPECIES	2	ENSGT00990000204522	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Climbing perch	MODERN SPECIES	20	ptpn22 (ENSATEG00000024244)	ENSATEG00000024254	ENSATEG00000024262	ENSATEG00000024271	tmem269 (ENSATEG00000024275)	ENSATEG00000025624	agmat (ENSATEG00000024280)	ENSATEG00000024282	pink1 (ENSATEG00000024284)	ENSATEG00000024285	ENSATEG00000024300	fam43b (ENSATEG00000024333)	ENSATEG00000024335	mul1b (ENSATEG00000030021)	VWA5B1 (ENSATEG00000024340)	ddx19a (ENSATEG00000024346) #21	ENSATEG00000024368	ubxn10 (ENSATEG00000024371)	cptp (ENSATEG00000026013)	ints11 (ENSATEG00000024376)	ENSATEG00000024380	ENSATEG00000024381	ACAP3 (ENSATEG00000024384)	ENSATEG00000024393	sdf4 (ENSATEG00000024400)	c1qtnf12 (ENSATEG00000028336)	olfml3a (ENSATEG00000024405)	ENSATEG00000024407	klhl21 (ENSATEG00000024410)	ZBTB48 (ENSATEG00000024413)	NOL9 (ENSATEG00000024414)
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000016777	fam43b (ENSBSLG00000016801)	ENSBSLG00000016894	pink1 (ENSBSLG00000016914)	ENSBSLG00000016959	agmat (ENSBSLG00000016986)	tmem269 (ENSBSLG00000017818)	ENSBSLG00000017858	RSBN1 (ENSBSLG00000018042)	ENSBSLG00000018050	ENSBSLG00000018075	ENSBSLG00000018160	rca2.1 (ENSBSLG00000018204)	mul1b (ENSBSLG00000018288)	VWA5B1 (ENSBSLG00000018307)	ddx19a (ENSBSLG00000018359) #21	ENSBSLG00000018696	ubxn10 (ENSBSLG00000018700)	cptp (ENSBSLG00000018702)	ints11 (ENSBSLG00000018712)	ENSBSLG00000019248	ENSBSLG00000019253	ACAP3 (ENSBSLG00000019328)	HIPK1 (ENSBSLG00000020852)	sdf4 (ENSBSLG00000020853)	c1qtnf12 (ENSBSLG00000020855)	olfml3a (ENSBSLG00000020858)	SYT6 (ENSBSLG00000020859)	klhl21 (ENSBSLG00000020861)	ZBTB48 (ENSBSLG00000020862)	NOL9 (ENSBSLG00000020864)
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000027944	ENSMAMG00000003633	ENSMAMG00000003647	tmem269 (ENSMAMG00000003791)	ENSMAMG00000003831	ENSMAMG00000004189	agmat (ENSMAMG00000004215)	agmat (ENSMAMG00000027089)	pink1 (ENSMAMG00000025777)	ENSMAMG00000004288	ENSMAMG00000004309	fam43b (ENSMAMG00000004325)	ENSMAMG00000004339	mul1b (ENSMAMG00000004356)	VWA5B1 (ENSMAMG00000004393)	ddx19a (ENSMAMG00000004449) #21	ENSMAMG00000004481	ubxn10 (ENSMAMG00000004500)	cptp (ENSMAMG00000004511)	ints11 (ENSMAMG00000004522)	ENSMAMG00000004574	ENSMAMG00000004597	ACAP3 (ENSMAMG00000004633)	ENSMAMG00000004776	sdf4 (ENSMAMG00000004857)	c1qtnf12 (ENSMAMG00000026776)	olfml3a (ENSMAMG00000004904)	ENSMAMG00000004923	klhl21 (ENSMAMG00000004956)	ZBTB48 (ENSMAMG00000004968)	NOL9 (ENSMAMG00000004993)
Carangaria	ANCESTRAL SPECIES	2	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT01010000222933	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Pleuronectoidei	ANCESTRAL SPECIES	24	ENSGT00940000163310.k.a	ENSGT00990000203957	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b
Turbot	MODERN SPECIES	2	ptpn22 (ENSSMAG00000020748)	ENSSMAG00000020747	ENSSMAG00000020737	tmem269 (ENSSMAG00000020719)	ENSSMAG00000020715	ENSSMAG00000020541	agmat (ENSSMAG00000020529)	ENSSMAG00000018709	pink1 (ENSSMAG00000020523)	ENSSMAG00000020373	ENSSMAG00000020000	fam43b (ENSSMAG00000019995)	ENSSMAG00000019991	mul1b (ENSSMAG00000019986)	VWA5B1 (ENSSMAG00000019978)	ddx19a (ENSSMAG00000019659) #21	ubxn10 (ENSSMAG00000019647)	cptp (ENSSMAG00000030979)	ints11 (ENSSMAG00000019579)	ENSSMAG00000031260	ACAP3 (ENSSMAG00000019478)	ENSSMAG00000019442	sdf4 (ENSSMAG00000019416)	c1qtnf12 (ENSSMAG00000019386)	olfml3a (ENSSMAG00000029134)	ENSSMAG00000019346	klhl21 (ENSSMAG00000019333)	ZBTB48 (ENSSMAG00000019326)	NOL9 (ENSSMAG00000019318)	PLEKHG5 (ENSSMAG00000019289)	ENSSMAG00000025759
Tongue sole	MODERN SPECIES	1	PLXNA2 (ENSCSEG00000016921)	ENSCSEG00000016965	ENSCSEG00000016980	ptpn22 (ENSCSEG00000017013)	ENSCSEG00000017029	MAGI3 (ENSCSEG00000017072)	tmem269 (ENSCSEG00000017100)	HSPG2 (ENSCSEG00000017118)	agmat (ENSCSEG00000017206)	pink1 (ENSCSEG00000017215)	ENSCSEG00000017226	ENSCSEG00000017277	fam43b (ENSCSEG00000017282)	mul1b (ENSCSEG00000017285)	VWA5B1 (ENSCSEG00000017297)	ddx19a (ENSCSEG00000017322) #21	ENSCSEG00000017350	ENSCSEG00000017355	cptp (ENSCSEG00000017363)	ints11 (ENSCSEG00000017374)	ENSCSEG00000017401	ENSCSEG00000017410	ACAP3 (ENSCSEG00000017416)	HIPK1 (ENSCSEG00000017446)	sdf4 (ENSCSEG00000017475)	c1qtnf12 (ENSCSEG00000017481)	olfml3a (ENSCSEG00000017490)	SYT6 (ENSCSEG00000017496)	ENSCSEG00000017513	klhl21 (ENSCSEG00000017524)	ZBTB48 (ENSCSEG00000017531)
Carangaria_A	ANCESTRAL SPECIES	1	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT01010000222933	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Seriola	ANCESTRAL SPECIES	25	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT01010000222933	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Yellowtail amberjack	MODERN SPECIES	3108						sema3bl (ENSSLDG00000016844)	agmat (ENSSLDG00000016947)	TUBA1C (ENSSLDG00000016971)	pink1 (ENSSLDG00000016982)	ENSSLDG00000016991	ENSSLDG00000017006	fam43b (ENSSLDG00000017017)	ENSSLDG00000017024	mul1b (ENSSLDG00000017039)	VWA5B1 (ENSSLDG00000017061)	ddx19a (ENSSLDG00000017107) #21	ENSSLDG00000017130	ubxn10 (ENSSLDG00000017141)	cptp (ENSSLDG00000017148)	ints11 (ENSSLDG00000017198)	ENSSLDG00000017321	ENSSLDG00000017335	ACAP3 (ENSSLDG00000017376)	HIPK1 (ENSSLDG00000017509)	sdf4 (ENSSLDG00000017583)	c1qtnf12 (ENSSLDG00000017601)	olfml3a (ENSSLDG00000017625)	SYT6 (ENSSLDG00000017644)	klhl21 (ENSSLDG00000017687)	ZBTB48 (ENSSLDG00000017718)	NOL9 (ENSSLDG00000017742)
Greater amberjack	MODERN SPECIES	145	ENSSDUG00000003379	ENSSDUG00000003412	tmem269 (ENSSDUG00000003433)	ENSSDUG00000003454	HSPG2 (ENSSDUG00000003521)	agmat (ENSSDUG00000003692)	agmat (ENSSDUG00000003756)	ENSSDUG00000003775	pink1 (ENSSDUG00000003785)	ENSSDUG00000003801	ENSSDUG00000003812	fam43b (ENSSDUG00000003821)	ENSSDUG00000003832	mul1b (ENSSDUG00000003849)	VWA5B1 (ENSSDUG00000003874)	ddx19a (ENSSDUG00000003930) #21	ENSSDUG00000003949	ubxn10 (ENSSDUG00000003957)	cptp (ENSSDUG00000003967)	ints11 (ENSSDUG00000003980)	ENSSDUG00000004034	ENSSDUG00000004045	ACAP3 (ENSSDUG00000004079)	HIPK1 (ENSSDUG00000004226)	sdf4 (ENSSDUG00000004306)	c1qtnf12 (ENSSDUG00000004349)	olfml3a (ENSSDUG00000004367)	SYT6 (ENSSDUG00000004382)	klhl21 (ENSSDUG00000004414)	ZBTB48 (ENSSDUG00000004449)	NOL9 (ENSSDUG00000004472)
Barramundi perch	MODERN SPECIES		ENSLCAG00010024118	ENSLCAG00010024125	ENSLCAG00010024134	tmem269 (ENSLCAG00010024137)	ENSLCAG00010024145	HSPG2 (ENSLCAG00010024179)	agmat (ENSLCAG00010024351)	ENSLCAG00010024366	pink1 (ENSLCAG00010024381)	ENSLCAG00010024384	ENSLCAG00010024387	fam43b (ENSLCAG00010024389)	ENSLCAG00010024395	mul1b (ENSLCAG00010024397)	VWA5B1 (ENSLCAG00010024401)	ddx19a (ENSLCAG00010024412) #21	ENSLCAG00010024416	ubxn10 (ENSLCAG00010024423)	cptp (ENSLCAG00010024427)	ints11 (ENSLCAG00010024442)	ENSLCAG00010024463	ENSLCAG00010024464	ACAP3 (ENSLCAG00010024829)	HIPK1 (ENSLCAG00010025517)	sdf4 (ENSLCAG00010025542)	c1qtnf12 (ENSLCAG00010025551)	olfml3a (ENSLCAG00010025555)	SYT6 (ENSLCAG00010025560)	ENSLCAG00010025564	klhl21 (ENSLCAG00010025566)	ENSLCAG00010025571
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Ovalentaria_B	ANCESTRAL SPECIES	2	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Cichlidae	ANCESTRAL SPECIES		ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Pseudocrenilabrinae	ANCESTRAL SPECIES	5	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	18	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Haplochromini	ANCESTRAL SPECIES	20	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00390000012939	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b
Burton s mouthbrooder	MODERN SPECIES	295	RSBN1 (ENSHBUG00000006211)	ENSHBUG00000006329	ENSHBUG00000006361	tmem269 (ENSHBUG00000006387)	HSPG2 (ENSHBUG00000006586)	agmat (ENSHBUG00000006637)	TUBA1C (ENSHBUG00000006666)	pink1 (ENSHBUG00000006671)	ENSHBUG00000006679	ENSHBUG00000006690	ENSHBUG00000006702	fam43b (ENSHBUG00000006722)	mul1b (ENSHBUG00000006738)	VWA5B1 (ENSHBUG00000000167)	ubxn10 (ENSHBUG00000006763)	ddx19a (ENSHBUG00000006785) #21	cptp (ENSHBUG00000006792)	ints11 (ENSHBUG00000006820)	ENSHBUG00000006843	ENSHBUG00000006862	ACAP3 (ENSHBUG00000006921)	HIPK1 (ENSHBUG00000006987)	sdf4 (ENSHBUG00000007013)	c1qtnf12 (ENSHBUG00000007029)	olfml3a (ENSHBUG00000007044)	SYT6 (ENSHBUG00000007073)	klhl21 (ENSHBUG00000007101)	ZBTB48 (ENSHBUG00000007124)	NOL9 (ENSHBUG00000007134)	PLEKHG5 (ENSHBUG00000007175)	ENSHBUG00000007205
Haplochromini_A	ANCESTRAL SPECIES	17	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
P. nyererei	MODERN SPECIES	401				tmem269 (ENSPNYG00000019932)	HSPG2 (ENSPNYG00000019971)	ENSPNYG00000020188	agmat (ENSPNYG00000020421)	tuba2 (ENSPNYG00000020451)	pink1 (ENSPNYG00000020461)	ENSPNYG00000020469	ENSPNYG00000020577	fam43b (ENSPNYG00000021058)	ENSPNYG00000021069	mul1b (ENSPNYG00000021079)	VWA5B1 (ENSPNYG00000021106)	ddx19a (ENSPNYG00000021160) #21	ENSPNYG00000021190	ubxn10 (ENSPNYG00000021216)	ints11 (ENSPNYG00000021238)	cptp (ENSPNYG00000021273)	ENSPNYG00000021281	ENSPNYG00000021292	ACAP3 (ENSPNYG00000021321)	HIPK1 (ENSPNYG00000021396)	sdf4 (ENSPNYG00000021421)	c1qtnf12 (ENSPNYG00000021436)	olfml3a (ENSPNYG00000021454)	SYT6 (ENSPNYG00000021462)	klhl21 (ENSPNYG00000021481)	ENSPNYG00000021501	ENSPNYG00000021506
Haplochromini_B	ANCESTRAL SPECIES	14	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000164472.a.b.a.b.a.a.a.b.a.b.a.a.a.b.a.b	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00390000012939	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b
Zebra mbuna	MODERN SPECIES	1103	ENSMZEG00005022276	ENSMZEG00005022281	tmem269 (ENSMZEG00005022285)	ENSMZEG00005022292	ENSMZEG00005022297	ENSMZEG00005022300	agmat (ENSMZEG00005022303)	ENSMZEG00005022306	pink1 (ENSMZEG00005022310)	ENSMZEG00005022312	ENSMZEG00005022320	fam43b (ENSMZEG00005023340)	ENSMZEG00005023341	mul1b (ENSMZEG00005023342)	VWA5B1 (ENSMZEG00005023343)	ddx19a (ENSMZEG00005023347) #21	ENSMZEG00005023348	ubxn10 (ENSMZEG00005023350)	cptp (ENSMZEG00005023351)	ints11 (ENSMZEG00005023352)	ENSMZEG00005023358	ENSMZEG00005023360	ACAP3 (ENSMZEG00005023365)	HIPK1 (ENSMZEG00005023371)	sdf4 (ENSMZEG00005023373)	c1qtnf12 (ENSMZEG00005023375)	olfml3a (ENSMZEG00005023377)	SYT6 (ENSMZEG00005023378)	klhl21 (ENSMZEG00005023382)	ZBTB48 (ENSMZEG00005023385)	NOL9 (ENSMZEG00005023387)
Eastern happy	MODERN SPECIES	12	ENSACLG00000022160	tmem269 (ENSACLG00000022135)	ENSACLG00000022089	HSPG2 (ENSACLG00000020266)	agmat (ENSACLG00000020177)	ENSACLG00000019718	pink1 (ENSACLG00000019688)	ENSACLG00000019676	ENSACLG00000019066	fam43b (ENSACLG00000019029)	ENSACLG00000019022	mul1b (ENSACLG00000019015)	ENSACLG00000018999	VWA5B1 (ENSACLG00000018969)	ubxn10 (ENSACLG00000018960)	ddx19a (ENSACLG00000018912) #21	cptp (ENSACLG00000018875)	ints11 (ENSACLG00000018782)	ENSACLG00000018758	ENSACLG00000018732	ACAP3 (ENSACLG00000018556)	HIPK1 (ENSACLG00000018459)	sdf4 (ENSACLG00000018426)	c1qtnf12 (ENSACLG00000018423)	olfml3a (ENSACLG00000018394)	SYT6 (ENSACLG00000018361)	klhl21 (ENSACLG00000018342)	klhl21 (ENSACLG00000018306)	ZBTB48 (ENSACLG00000018276)	PLEKHG5 (ENSACLG00000018187)	ENSACLG00000018114
Lyretail cichlid	MODERN SPECIES	321	ENSNBRG00000004441	ENSNBRG00000004415	ENSNBRG00000004387	ENSNBRG00000004353	tmem269 (ENSNBRG00000004336)	HSPG2 (ENSNBRG00000004145)	agmat (ENSNBRG00000004099)	TUBA1C (ENSNBRG00000004072)	pink1 (ENSNBRG00000004041)	ENSNBRG00000003410	ENSNBRG00000002927	fam43b (ENSNBRG00000002864)	ENSNBRG00000002841	mul1b (ENSNBRG00000002819)	VWA5B1 (ENSNBRG00000002766)	ddx19a (ENSNBRG00000002655) #21	ubxn10 (ENSNBRG00000002633)	cptp (ENSNBRG00000002616)	ints11 (ENSNBRG00000002564)	ENSNBRG00000002549	ENSNBRG00000002529	ACAP3 (ENSNBRG00000002435)	HIPK1 (ENSNBRG00000002336)	sdf4 (ENSNBRG00000002308)	c1qtnf12 (ENSNBRG00000002287)	olfml3a (ENSNBRG00000002258)	SYT6 (ENSNBRG00000002233)	klhl21 (ENSNBRG00000002210)	ENSNBRG00000002198	ENSNBRG00000002162	ENSNBRG00000002099
Nile tilapia	MODERN SPECIES	12	tmem269 (ENSONIG00000035267)	ENSONIG00000037895	tmem269 (ENSONIG00000016626)	HSPG2 (ENSONIG00000016621)	agmat (ENSONIG00000016620)	ENSONIG00000014870	tuba4l (ENSONIG00000020575)	pink1 (ENSONIG00000016617)	ENSONIG00000016616	ENSONIG00000027184	ENSONIG00000028570	fam43b (ENSONIG00000016610)	mul1b (ENSONIG00000016609)	VWA5B1 (ENSONIG00000016606)	ENSONIG00000029292	ddx19a (ENSONIG00000016602) #21	ubxn10 (ENSONIG00000016605)	cptp (ENSONIG00000034471)	ints11 (ENSONIG00000016600)	ENSONIG00000021136	ENSONIG00000027999	ACAP3 (ENSONIG00000016597)	HIPK1 (ENSONIG00000016595)	sdf4 (ENSONIG00000016591)	c1qtnf12 (ENSONIG00000016589)	olfml3a (ENSONIG00000038854)	ENSONIG00000035074	ENSONIG00000027833	SYT6 (ENSONIG00000016581)	klhl21 (ENSONIG00000016580)	ZBTB48 (ENSONIG00000016577)
Midas cichlid	MODERN SPECIES	531	ENSACIG00000014553	ENSACIG00000014569	RSBN1 (ENSACIG00000014588)	MAGI3 (ENSACIG00000014645)	tmem269 (ENSACIG00000014693)	HSPG2 (ENSACIG00000014726)	agmat (ENSACIG00000014905)	ENSACIG00000014957	pink1 (ENSACIG00000014971)	ENSACIG00000015051	ENSACIG00000015812	fam43b (ENSACIG00000016593)	ENSACIG00000016605	mul1b (ENSACIG00000016615)	VWA5B1 (ENSACIG00000016625)	ddx19a (ENSACIG00000016665) #21	ENSACIG00000016687	ubxn10 (ENSACIG00000016698)	cptp (ENSACIG00000016706)	ints11 (ENSACIG00000016715)	ENSACIG00000016757	ENSACIG00000016768	ACAP3 (ENSACIG00000016793)	HIPK1 (ENSACIG00000016845)	sdf4 (ENSACIG00000016880)	c1qtnf12 (ENSACIG00000016909)	olfml3a (ENSACIG00000016938)	SYT6 (ENSACIG00000016956)	klhl21 (ENSACIG00000016975)	ZBTB48 (ENSACIG00000016989)	NOL9 (ENSACIG00000017043)
Pomacentridae	ANCESTRAL SPECIES	2	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000176954	ENSGT00940000154417.c #21	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a.e	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b	ENSGT00650000094986
Pomacentridae_A	ANCESTRAL SPECIES	24	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000176954	ENSGT00940000154417.c #21	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a.e	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b	ENSGT00650000094986
Amphiprion	ANCESTRAL SPECIES	15	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000164472.a.b.c.a.b	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b.l	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000155356.d.b.a.a.a.a.a.b.c	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a.e	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Orange clownfish	MODERN SPECIES	22	MAGI3 (ENSAPEG00000024174)	ENSAPEG00000024205	tmem269 (ENSAPEG00000024219)	ENSAPEG00000024245	ENSAPEG00000024320	HSPG2 (ENSAPEG00000024424)	agmat (ENSAPEG00000024642)	ENSAPEG00000024646	pink1 (ENSAPEG00000024649)	ENSAPEG00000024658	ENSAPEG00000024677	fam43b (ENSAPEG00000024690)	ENSAPEG00000024692	mul1b (ENSAPEG00000024695)	VWA5B1 (ENSAPEG00000024700)	ddx19a (ENSAPEG00000024709) #21	ENSAPEG00000024716	ubxn10 (ENSAPEG00000024720)	cptp (ENSAPEG00000024726)	ints11 (ENSAPEG00000024732)	ENSAPEG00000024743	ENSAPEG00000024752	ACAP3 (ENSAPEG00000024769)	HIPK1 (ENSAPEG00000024778)	sdf4 (ENSAPEG00000024789)	c1qtnf12 (ENSAPEG00000024793)	olfml3a (ENSAPEG00000000297)	SYT6 (ENSAPEG00000000337)	klhl21 (ENSAPEG00000000370)	ZBTB48 (ENSAPEG00000000398)	NOL9 (ENSAPEG00000000416)
Clown anemonefish	MODERN SPECIES	3464			ENSAOCG00000019014	ENSAOCG00000019059	HSPG2 (ENSAOCG00000020539)	agmat (ENSAOCG00000020693)	ENSAOCG00000020721	pink1 (ENSAOCG00000020731)	ENSAOCG00000020805	ENSAOCG00000020835	fam43b (ENSAOCG00000020851)	ENSAOCG00000001541	mul1b (ENSAOCG00000020899)	VWA5B1 (ENSAOCG00000020981)	ENSAOCG00000021003	ddx19a (ENSAOCG00000021067) #21	ubxn10 (ENSAOCG00000021087)	cptp (ENSAOCG00000021096)	ints11 (ENSAOCG00000021172)	ENSAOCG00000021191	ENSAOCG00000021221	ACAP3 (ENSAOCG00000021369)	HIPK1 (ENSAOCG00000021475)
Spiny chromis	MODERN SPECIES	216	ENSAPOG00000021942	tmem269 (ENSAPOG00000021962)	ENSAPOG00000021968	ENSAPOG00000022018	HSPG2 (ENSAPOG00000022235)	agmat (ENSAPOG00000022261)	TUBA1C (ENSAPOG00000022280)	pink1 (ENSAPOG00000000635)	ENSAPOG00000022317	ENSAPOG00000022412	fam43b (ENSAPOG00000022424)	ENSAPOG00000022438	mul1b (ENSAPOG00000022464)	VWA5B1 (ENSAPOG00000022492)	ENSAPOG00000022511	ddx19a (ENSAPOG00000022551) #21	ubxn10 (ENSAPOG00000022567)	cptp (ENSAPOG00000022588)	ints11 (ENSAPOG00000022656)	ENSAPOG00000022674	ENSAPOG00000022713	ENSAPOG00000022740
Bicolor damselfish	MODERN SPECIES	256	MAGI3 (ENSSPAG00000018898)	ENSSPAG00000018874	tmem269 (ENSSPAG00000018860)	ENSSPAG00000018843	HSPG2 (ENSSPAG00000018682)	agmat (ENSSPAG00000018648)	ENSSPAG00000018630	pink1 (ENSSPAG00000018617)	ENSSPAG00000018606	ENSSPAG00000018519	fam43b (ENSSPAG00000018483)	ENSSPAG00000018474	mul1b (ENSSPAG00000018454)	VWA5B1 (ENSSPAG00000018416)	ENSSPAG00000018399	ddx19a (ENSSPAG00000018381) #21	ubxn10 (ENSSPAG00000018372)	cptp (ENSSPAG00000018365)	ENSSPAG00000018347	ints11 (ENSSPAG00000018290)
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00990000203827	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000176954	ENSGT00940000154417.c #21	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b
Aplocheiloidei	ANCESTRAL SPECIES	41	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00940000154457.a.a.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000176954	ENSGT00940000154417.c #21	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b	ENSGT00950000183003.a.b
Mangrove rivulus	MODERN SPECIES	46	RSBN1 (ENSKMAG00000004762)	MAGI3 (ENSKMAG00000004614)	ENSKMAG00000004558	tmem269 (ENSKMAG00000004524)	HSPG2 (ENSKMAG00000004041)	agmat (ENSKMAG00000003979)	agmat (ENSKMAG00000003947)	tuba1c (ENSKMAG00000003930)	pink1 (ENSKMAG00000003918)	ENSKMAG00000003878	ENSKMAG00000003858	ENSKMAG00000003840	fam43b (ENSKMAG00000003828)	mul1b (ENSKMAG00000003815)	VWA5B1 (ENSKMAG00000003737)	ddx19a (ENSKMAG00000003496) #21	ubxn10 (ENSKMAG00000003452)	cptp (ENSKMAG00000003437)	ENSKMAG00000003411	ints11 (ENSKMAG00000003315)	ACAP3 (ENSKMAG00000003151)	HIPK1 (ENSKMAG00000003058)	sdf4 (ENSKMAG00000003021)	c1qtnf12 (ENSKMAG00000003001)	olfml3a (ENSKMAG00000002999)	SYT6 (ENSKMAG00000002989)	klhl21 (ENSKMAG00000002980)	ZBTB48 (ENSKMAG00000002963)	NOL9 (ENSKMAG00000002937)	PLEKHG5 (ENSKMAG00000002792)	ENSKMAG00000002738
Turquoise killifish	MODERN SPECIES	1624	ENSNFUG00015007527	RSBN1 (ENSNFUG00015007522)	MAGI3 (ENSNFUG00015007511)	tmem269 (ENSNFUG00015007493)	ENSNFUG00015007490	AGMAT (ENSNFUG00015006872)	ENSNFUG00015006860	PINK1 (ENSNFUG00015006854)	ENSNFUG00015006847	ENSNFUG00015006842	fam43b (ENSNFUG00015006840)	ENSNFUG00015006837	MUL1B (ENSNFUG00015006834)	VWA5B1 (ENSNFUG00015006831)	ENSNFUG00015006826	ddx19a (ENSNFUG00015006814) #21	GLTPD1 (ENSNFUG00015006808)	CPSF3L (ENSNFUG00015006339)	ENSNFUG00015006294	TNPO1 (ENSNFUG00015006172)	fcho2 (ENSNFUG00015005321)	TMEM174 (ENSNFUG00015005119)	ENSNFUG00015005111	KLHL21 (ENSNFUG00015005107)	ZBTB48 (ENSNFUG00015005094)	NOL9 (ENSNFUG00015005074)	PLEKHG5 (ENSNFUG00015005009)	ENSNFUG00015004979	ENSNFUG00015004962	irx7 (ENSNFUG00015004947)	ENSNFUG00015004908
Cyprinodontoidei	ANCESTRAL SPECIES	3	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000176954	ENSGT00940000154417.c #21	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00990000203827	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938.h	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Poecilia	ANCESTRAL SPECIES	14	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00940000158938.h	ENSGT00940000176954	ENSGT00940000154417.c #21	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b
NAME_6	ANCESTRAL SPECIES	237				ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00940000158938.h	ENSGT00940000176954	ENSGT00940000154417.c #21	ENSGT00940000165549.f	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a
Amazon molly	DUPLICATION
Amazon molly	MODERN SPECIES	518																ddx19a (ENSPFOG00000008754) #21	cptp (ENSPFOG00000008730)	ints11 (ENSPFOG00000008512)	ENSPFOG00000020780	ENSPFOG00000022533	ACAP3 (ENSPFOG00000007893)	HIPK1 (ENSPFOG00000007764)	sdf4 (ENSPFOG00000007664)	c1qtnf12 (ENSPFOG00000007588)	olfml3a (ENSPFOG00000007570)	SYT6 (ENSPFOG00000007481)	ENSPFOG00000021862	NOL9 (ENSPFOG00000007423)	klhl21 (ENSPFOG00000007400)	ZBTB48 (ENSPFOG00000007280)	NOL9 (ENSPFOG00000007135)
Amazon molly	MODERN SPECIES	750						tmem269 (ENSPFOG00000008706)	HSPG2 (ENSPFOG00000008140)	agmat (ENSPFOG00000008058)	ENSPFOG00000008025	pink1 (ENSPFOG00000007920)	ENSPFOG00000007779	ENSPFOG00000007653	fam43b (ENSPFOG00000007634)	mul1b (ENSPFOG00000007566)	VWA5B1 (ENSPFOG00000007356)	ddx19a (ENSPFOG00000007233) #21	ubxn10 (ENSPFOG00000020277)	cptp (ENSPFOG00000023563)
Sailfin molly	MODERN SPECIES	423				tmem269 (ENSPLAG00000016903)	HSPG2 (ENSPLAG00000017011)	agmat (ENSPLAG00000017041)	ENSPLAG00000017062	pink1 (ENSPLAG00000017068)	ENSPLAG00000017195	ENSPLAG00000018913	ENSPLAG00000018964	fam43b (ENSPLAG00000018969)	mul1b (ENSPLAG00000018981)	VWA5B1 (ENSPLAG00000019038)	ENSPLAG00000019055	ddx19a (ENSPLAG00000019100) #21	ubxn10 (ENSPLAG00000019115)	cptp (ENSPLAG00000019124)	ENSPLAG00000019144	ints11 (ENSPLAG00000019195)
Guppy	MODERN SPECIES	459	ENSPREG00000022409	ENSPREG00000022404	MAGI3 (ENSPREG00000022382)	tmem269 (ENSPREG00000022374)	HSPG2 (ENSPREG00000022327)	agmat (ENSPREG00000022292)	ENSPREG00000022285	pink1 (ENSPREG00000022279)	ENSPREG00000022276	ENSPREG00000021822	ENSPREG00000021601	fam43b (ENSPREG00000021591)	mul1b (ENSPREG00000021587)	ENSPREG00000021576	ENSPREG00000021566	ddx19a (ENSPREG00000021557) #21	ubxn10 (ENSPREG00000021549)	cptp (ENSPREG00000021546)	ints11 (ENSPREG00000021516)	ENSPREG00000021499	ENSPREG00000021496	ENSPREG00000021484	HIPK1 (ENSPREG00000021467)	sdf4 (ENSPREG00000021453)	c1qtnf12 (ENSPREG00000021435)	olfml3a (ENSPREG00000021414)	SYT6 (ENSPREG00000021360)	klhl21 (ENSPREG00000021333)	ZBTB48 (ENSPREG00000021324)	NOL9 (ENSPREG00000021305)	PLEKHG5 (ENSPREG00000021258)
Platyfish	MODERN SPECIES		ENSXMAG00000026345	RSBN1 (ENSXMAG00000012327)	MAGI3 (ENSXMAG00000021151)	tmem269 (ENSXMAG00000024776)	HSPG2 (ENSXMAG00000012335)	ENSXMAG00000028421	agmat (ENSXMAG00000012356)	ENSXMAG00000027485	pink1 (ENSXMAG00000012373)	ENSXMAG00000027225	ENSXMAG00000012410	fam43b (ENSXMAG00000019790)	ENSXMAG00000022596	mul1b (ENSXMAG00000012421)	VWA5B1 (ENSXMAG00000012428)	ddx19a (ENSXMAG00000012440) #21	ENSXMAG00000022729	ubxn10 (ENSXMAG00000027375)	cptp (ENSXMAG00000012455)	ints11 (ENSXMAG00000012456)	ENSXMAG00000012471	ENSXMAG00000026940	ACAP3 (ENSXMAG00000012472)	HIPK1 (ENSXMAG00000012561)	sdf4 (ENSXMAG00000012579)	c1qtnf12 (ENSXMAG00000012587)	olfml3a (ENSXMAG00000012596)	SYT6 (ENSXMAG00000012599)	klhl21 (ENSXMAG00000012605)	ZBTB48 (ENSXMAG00000012617)	NOL9 (ENSXMAG00000012629)
NAME_4	ANCESTRAL SPECIES	21	ENSGT00940000154967.a.a.b.k.a	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000176954	ENSGT00940000154417.c #21	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183205.b.b
Mummichog	MODERN SPECIES	2349	ENSFHEG00000006998	ENSFHEG00000007027	RSBN1 (ENSFHEG00000007043)	MAGI3 (ENSFHEG00000007081)	tmem269 (ENSFHEG00000007105)	HSPG2 (ENSFHEG00000007346)	agmat (ENSFHEG00000007361)	ENSFHEG00000007393	pink1 (ENSFHEG00000007401)	ENSFHEG00000007408	ENSFHEG00000007549	fam43b (ENSFHEG00000007566)	VWA5B1 (ENSFHEG00000007620)	ENSFHEG00000007627	ubxn10 (ENSFHEG00000007633)	ddx19a (ENSFHEG00000007798) #21	cptp (ENSFHEG00000000201)	ints11 (ENSFHEG00000007863)	ENSFHEG00000007871	ENSFHEG00000007879
Sheepshead minnow	MODERN SPECIES	633						IQSEC2 (ENSCVAG00000007516)	kdm5c (ENSCVAG00000007663)	ENSCVAG00000007689	ENSCVAG00000007718	pink1 (ENSCVAG00000007749)	ENSCVAG00000007759	ENSCVAG00000007768	fam43b (ENSCVAG00000007778)	mul1b (ENSCVAG00000007785)	VWA5B1 (ENSCVAG00000007847)	ddx19a (ENSCVAG00000008721) #21	cptp (ENSCVAG00000008736)	ints11 (ENSCVAG00000008788)	ENSCVAG00000008801	ENSCVAG00000008812	ENSCVAG00000008829	ENSCVAG00000008870	ENSCVAG00000008875
Oryzias	ANCESTRAL SPECIES	4	ENSGT00990000203957	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b
Oryzias_b	ANCESTRAL SPECIES	2	ENSGT00940000154967.a.a.b	ENSGT00990000203957	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00950000183195.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00940000156199.a.b	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b	ENSGT00950000183003.a.b
Javanese ricefish	MODERN SPECIES	21	RSBN1 (ENSOJAG00000009049)	MAGI3 (ENSOJAG00000009089)	tmem269 (ENSOJAG00000009212)	agmat (ENSOJAG00000011515)	ENSOJAG00000011526	pink1 (ENSOJAG00000011591)	ENSOJAG00000011618	ENSOJAG00000011623	ENSOJAG00000011633	ENSOJAG00000011639	ENSOJAG00000011653	fam43b (ENSOJAG00000011675)	ENSOJAG00000011707	ENSOJAG00000011719	VWA5B1 (ENSOJAG00000011738)	ddx19a (ENSOJAG00000011756) #21	ENSOJAG00000011771	ENSOJAG00000011799	ints11 (ENSOJAG00000011829)	cptp (ENSOJAG00000011970)	ACAP3 (ENSOJAG00000012086)	HIPK1 (ENSOJAG00000013315)	sdf4 (ENSOJAG00000013355)	c1qtnf12 (ENSOJAG00000013372)	ENSOJAG00000013412	olfml3a (ENSOJAG00000013419)	ENSOJAG00000013425	SYT6 (ENSOJAG00000013430)	klhl21 (ENSOJAG00000013437)	ZBTB48 (ENSOJAG00000013464)	NOL9 (ENSOJAG00000013476)
Indian medaka	MODERN SPECIES	23	ENSOMEG00000018980	ENSOMEG00000018949	chrnd (ENSOMEG00000018863)	RSBN1 (ENSOMEG00000018827)	MAGI3 (ENSOMEG00000018795)	tmem269 (ENSOMEG00000018680)	HSPG2 (ENSOMEG00000018627)	agmat (ENSOMEG00000018397)	ENSOMEG00000018370	pink1 (ENSOMEG00000018348)	ENSOMEG00000018314	ENSOMEG00000018309	ENSOMEG00000018291	fam43b (ENSOMEG00000018278)	VWA5B1 (ENSOMEG00000018264)	ddx19a (ENSOMEG00000018230) #21	ENSOMEG00000018189	ints11 (ENSOMEG00000018159)	ENSOMEG00000018099	cptp (ENSOMEG00000018086)	ACAP3 (ENSOMEG00000018052)	HIPK1 (ENSOMEG00000017914)	sdf4 (ENSOMEG00000017885)	c1qtnf12 (ENSOMEG00000017868)	olfml3a (ENSOMEG00000017854)	SYT6 (ENSOMEG00000017823)	klhl21 (ENSOMEG00000017784)	ZBTB48 (ENSOMEG00000017762)	NOL9 (ENSOMEG00000017724)	PLEKHG5 (ENSOMEG00000017670)	ENSOMEG00000017531
Oryzias_a	ANCESTRAL SPECIES		ENSGT00950000183072.b.a	ENSGT00940000158061.a	ENSGT00940000159931	ENSGT00390000002307.e	ENSGT01050000244850.C.b.u.a	ENSGT00390000008414.h	ENSGT00940000154967.a.a.b	ENSGT00990000203827	ENSGT00940000163310.k.a	ENSGT00990000203957	ENSGT00940000167346	ENSGT00390000001969.a	ENSGT00940000156496.a.b	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00940000154417.c #21	ENSGT00940000176954	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000183195.a	ENSGT00940000154457.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c
Chinese medaka	MODERN SPECIES	103								PLXNA2 (ENSOSIG00000011786)	ENSOSIG00000015960	ENSOSIG00000015961	ptpn22 (ENSOSIG00000015962)	RSBN1 (ENSOSIG00000015963)	ENSOSIG00000015971	tmem269 (ENSOSIG00000015972)	ENSOSIG00000016041	ddx19a (ENSOSIG00000016045) #21	ENSOSIG00000016046	cptp (ENSOSIG00000016047)	ints11 (ENSOSIG00000016051)	ENSOSIG00000016054	VWA5B1 (ENSOSIG00000016055)	mul1b (ENSOSIG00000016056)	ENSOSIG00000016057	fam43b (ENSOSIG00000016058)	ENSOSIG00000016060	ENSOSIG00000016061	pink1 (ENSOSIG00000016064)	agmat (ENSOSIG00000016066)	TUBA4B (ENSOSIG00000016069)	ACAP3 (ENSOSIG00000016143)	HIPK1 (ENSOSIG00000020675)
Japanese Medaka HdrR	MODERN SPECIES	21	itga5 (ENSORLG00000015664)	RAPGEF3 (ENSORLG00000015678)	slc48a1a (ENSORLG00000026959)	ENSORLG00000029708	ENSORLG00000015772	ENSORLG00000015828	rca2.1 (ENSORLG00000022462)	ENSORLG00000023216	ptpn22 (ENSORLG00000023150)	ENSORLG00000023785	ENSORLG00000015843	tmem269 (ENSORLG00000015848)	HSPG2 (ENSORLG00000015904)	ENSORLG00000022816	ENSORLG00000027246	ddx19a (ENSORLG00000015931) #21	ENSORLG00000029225	cptp (ENSORLG00000015937)	ints11 (ENSORLG00000015957)	ENSORLG00000015962	VWA5B1 (ENSORLG00000015968)	mul1b (ENSORLG00000023666)	ENSORLG00000022013	fam43b (ENSORLG00000015977)	ENSORLG00000028395	ENSORLG00000016000	pink1 (ENSORLG00000016007)	agmat (ENSORLG00000016013)	ENSORLG00000016016	ENSORLG00000016028	ENSORLG00000016039
Pinecone sodierfish	MODERN SPECIES	21	ubxn10 (ENSMMDG00005005304)	cptp (ENSMMDG00005005302)	ints11 (ENSMMDG00005005285)	ENSMMDG00005005276	ACAP3 (ENSMMDG00005005267)	HIPK1 (ENSMMDG00005004483)	cdaa (ENSMMDG00005004155)	cdaa (ENSMMDG00005004090)	ENSMMDG00005004069	ENSMMDG00005015695	ENSMMDG00005015687	fam43b (ENSMMDG00005015686)	mul1b (ENSMMDG00005015683)	VWA5B1 (ENSMMDG00005015672)	ENSMMDG00005015657	ddx19a (ENSMMDG00005014854) #21	pink1 (ENSMMDG00005014834)	agmat (ENSMMDG00005014826)	DNAJC16 (ENSMMDG00005014037)	casp9 (ENSMMDG00005014019)	HSPG2 (ENSMMDG00005014007)	ENSMMDG00005014004	tmem269 (ENSMMDG00005014001)	ENSMMDG00005014000	ENSMMDG00005013998	RSBN1 (ENSMMDG00005013996)	ENSMMDG00005013994	ENSMMDG00005013993	ENSMMDG00005013935	ENSMMDG00005013933	ENSMMDG00005013932
Cod	MODERN SPECIES		ENSGMOG00000018508	ENSGMOG00000003699	tmem269 (ENSGMOG00000011623)	ENSGMOG00000011630	CASP9 (ENSGMOG00000016718)	ENSGMOG00000016743	agmat (ENSGMOG00000030462)	pink1 (ENSGMOG00000015483)	ENSGMOG00000015468	ENSGMOG00000015456	ENSGMOG00000025197	fam43b (ENSGMOG00000006813)	ENSGMOG00000036072	mul1b (ENSGMOG00000006807)	VWA5B1 (ENSGMOG00000006768)	ddx19a (ENSGMOG00000006760) #21	ENSGMOG00000030173	ubxn10 (ENSGMOG00000006749)	cptp (ENSGMOG00000006741)	ints11 (ENSGMOG00000006721)	ENSGMOG00000020234	ACAP3 (ENSGMOG00000006685)	ENSGMOG00000006659	ENSGMOG00000006632	sdf4 (ENSGMOG00000006622)	c1qtnf12 (ENSGMOG00000006612)	olfml3a (ENSGMOG00000006608)	ENSGMOG00000006597	klhl21 (ENSGMOG00000006592)	ZBTB48 (ENSGMOG00000006563)	NOL9 (ENSGMOG00000006534)
Protacanthopterygii	ANCESTRAL SPECIES	6	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00940000159698	ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911.h.a	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01010000223025	ENSGT00940000158938.e	ENSGT00940000154417.c #21	ENSGT00990000208651	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c.a	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a.e	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00510000046843.a.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	10	ENSGT00940000156670.e.b	ENSGT00940000159698.e	ENSGT00940000155851.c.a.d	ENSGT00940000156670.e.a	ENSGT00940000159698.f	ENSGT00940000155851.c.a.c	ENSGT00950000183195.a	ENSGT00390000001206.i	ENSGT00390000000911.h.a.e	ENSGT01050000244971.A.d.a.b	ENSGT00940000162826.b	ENSGT00390000012141.b.e	ENSGT00390000004940.a.b.p	ENSGT00940000158938.f	ENSGT00940000158938.e.a	ENSGT00940000154417.c.g #21	ENSGT00990000210720	ENSGT00940000165549.i	ENSGT00940000157644.i	ENSGT01100000263537.b.a.a.a.b.i	ENSGT00940000156199.a.b.e	ENSGT00940000155356.c.a.a	ENSGT01010000222360.B.c	ENSGT00940000160300.o.a	ENSGT00940000158083.a.f	ENSGT00940000157665.a.h	ENSGT00940000158631.e	ENSGT00940000158981.j	ENSGT00510000046843.a.b.j	ENSGT00950000183003.a.b.e.b	ENSGT00950000183003.a.b.e.a.a
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00390000001969.a.c.a	ENSGT00940000156496.a.b.h	ENSGT00940000157871.i	ENSGT00940000154169.B.b.b	ENSGT00940000156670.e.a	ENSGT00940000159698.f	ENSGT00940000155851.c.a.c	ENSGT00950000183195.a	ENSGT00390000001206.i	ENSGT00390000000911.h.a.e	ENSGT01050000244971.A.d.a.b	ENSGT00940000162826.b	ENSGT00390000012141.b.e	ENSGT00390000004940.a.b.p	ENSGT00940000158938.e.a	ENSGT00940000154417.c.g #21	ENSGT00990000208651.b	ENSGT00990000210720	ENSGT00940000165549.i	ENSGT00940000157644.i	ENSGT01100000263537.b.a.a.a.b.i	ENSGT00940000156199.a.b.e	ENSGT00940000155356.c.a.a	ENSGT01010000222360.B.c	ENSGT00940000160300.o.a	ENSGT00940000158083.a.f	ENSGT00940000157665.a.h	ENSGT00940000158631.e	ENSGT00940000158981.j	ENSGT00510000046843.a.b.j	ENSGT00950000183003.a.b.e.b
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00390000001969.a.c.a	ENSGT00940000156496.a.b.h	ENSGT00940000157871.i	ENSGT00940000154169.B.b.b	ENSGT00940000156670.e.a	ENSGT00940000159698.f	ENSGT00940000155851.c.a.c	ENSGT00950000183195.a	ENSGT00390000001206.i	ENSGT00390000000911.h.a.e	ENSGT01050000244971.A.d.a.b	ENSGT00940000162826.b	ENSGT00390000012141.b.e	ENSGT01000000221356	ENSGT00940000158938.e.a	ENSGT00940000154417.c.g #21	ENSGT00990000208651.b	ENSGT00990000210720	ENSGT00940000165549.i	ENSGT00940000157644.i	ENSGT01100000263537.b.a.a.a.b.i	ENSGT00940000156199.a.b.e	ENSGT00940000155356.c.a.a	ENSGT01010000222360.B.c	ENSGT00940000160300.o.a	ENSGT00940000158083.a.f	ENSGT00940000157665.a.h	ENSGT00940000158631.e	ENSGT00940000158981.j	ENSGT00510000046843.a.b.j	ENSGT00950000183003.a.b.e.b
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00390000001969.a.d	ENSGT00390000001969.a.c.a	ENSGT00940000156496.a.b.h	ENSGT00940000157871.i	ENSGT00940000154169.B.b.b	ENSGT00940000159698.f	ENSGT00940000155851.c.a.c	ENSGT00950000183195.a	ENSGT00390000001206.i	ENSGT00390000000911.h.a.e	ENSGT01050000244971.A.d.a.b	ENSGT00940000162826.b	ENSGT00390000012141.b.e	ENSGT01000000221356	ENSGT00940000158938.e.a	ENSGT00940000154417.c.g #21	ENSGT00990000208651.b	ENSGT00940000165549.i	ENSGT00940000157644.i	ENSGT01100000263537.b.a.a.a.b.i	ENSGT00940000156199.a.b.e	ENSGT00940000155356.c.a.a	ENSGT01010000222360.B.c	ENSGT00940000160300.o.a	ENSGT00940000158083.a.f	ENSGT00940000157665.a.h	ENSGT00940000158631.e	ENSGT00940000158981.j	ENSGT00510000046843.a.b.j	ENSGT00950000183003.a.b.e.b	ENSGT00940000165935.e
Coho salmon	MODERN SPECIES	8	ENSOKIG00005021562	RSBN1 (ENSOKIG00005021574)	ENSOKIG00005021663	ENSOKIG00005021889	ENSOKIG00005021903	tmem269 (ENSOKIG00005021916)	ENSOKIG00005024265	ENSOKIG00005024275	agmat (ENSOKIG00005024286)	pink1 (ENSOKIG00005024334)	cdaa (ENSOKIG00005024360)	ENSOKIG00005024413	mul1b (ENSOKIG00005024432)	fam43b (ENSOKIG00005024441)	ENSOKIG00005024455	ddx19a (ENSOKIG00005024518) #21	ENSOKIG00005025697	cptp (ENSOKIG00005025737)	ints11 (ENSOKIG00005025788)	ENSOKIG00005026189	ACAP3 (ENSOKIG00005026588)	HIPK1 (ENSOKIG00005033247)	sdf4 (ENSOKIG00005033319)	c1qtnf12 (ENSOKIG00005033351)	SYT6 (ENSOKIG00005033403)	klhl21 (ENSOKIG00005033406)	ZBTB48 (ENSOKIG00005033417)	PLEKHG5 (ENSOKIG00005033443)	ENSOKIG00005033561	ENSOKIG00005033578	irx7 (ENSOKIG00005033597)
Chinook salmon	MODERN SPECIES	7	ENSOTSG00005005442	ENSOTSG00005005447	MAGI3 (ENSOTSG00005005450)	ENSOTSG00005005453	tmem269 (ENSOTSG00005005455)	casp9 (ENSOTSG00005006222)	DNAJC16 (ENSOTSG00005006251)	agmat (ENSOTSG00005006692)	pink1 (ENSOTSG00005006694)	cdaa (ENSOTSG00005006696)	ENSOTSG00005006704	fam43b (ENSOTSG00005006705)	mul1b (ENSOTSG00005006706)	ENSOTSG00005006708	VWA5B1 (ENSOTSG00005006709)	ddx19a (ENSOTSG00005006717) #21	ENSOTSG00005007672	cptp (ENSOTSG00005007674)	ints11 (ENSOTSG00005007689)	ENSOTSG00005009252	ACAP3 (ENSOTSG00005009277)	HIPK1 (ENSOTSG00005020658)	sdf4 (ENSOTSG00005020710)	c1qtnf12 (ENSOTSG00005020711)	ENSOTSG00005020712	olfml3a (ENSOTSG00005020714)	SYT6 (ENSOTSG00005020715)	klhl21 (ENSOTSG00005020716)	ZBTB48 (ENSOTSG00005020717)	PLEKHG5 (ENSOTSG00005020718)	ENSOTSG00005020719
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000001602	ENSOMYG00000001639	tmem269 (ENSOMYG00000001673)	ENSOMYG00000002032	ENSOMYG00000076660	ENSOMYG00000072826	CASP9 (ENSOMYG00000002381)	ENSOMYG00000002414	agmat (ENSOMYG00000002437)	pink1 (ENSOMYG00000002452)	cdaa (ENSOMYG00000002537)	ENSOMYG00000002569	fam43b (ENSOMYG00000002586)	mul1b (ENSOMYG00000002608)	VWA5B1 (ENSOMYG00000002653)	ddx19a (ENSOMYG00000002953) #21	ENSOMYG00000003287	ENSOMYG00000003323	cptp (ENSOMYG00000003361)	ints11 (ENSOMYG00000003726)	ENSOMYG00000003969	ACAP3 (ENSOMYG00000005479)	ENSOMYG00000006963	sdf4 (ENSOMYG00000007225)	c1qtnf12 (ENSOMYG00000007363)	ENSOMYG00000007445	klhl21 (ENSOMYG00000007497)	ZBTB48 (ENSOMYG00000007547)	PLEKHG5 (ENSOMYG00000007779)	ENSOMYG00000007833	irx7 (ENSOMYG00000007853)
Salmo	ANCESTRAL SPECIES	16	ENSGT00390000001969.a.c.a	ENSGT00940000156496.a.b.h	ENSGT00940000157871.i	ENSGT00940000154169.B.b.b	ENSGT00940000156670.e.a	ENSGT00940000159698.f	ENSGT00940000155851.c.a.c	ENSGT00950000183195.a	ENSGT00390000001206.i	ENSGT00390000000911.h.a.e	ENSGT01050000244971.A.d.a.b	ENSGT00940000162826.b	ENSGT00390000012141.b.e	ENSGT00390000004940.a.b.p	ENSGT00940000158938.e.a	ENSGT00940000154417.c.g #21	ENSGT00990000208651.b	ENSGT00990000210720	ENSGT00940000165549.i	ENSGT00940000157644.i	ENSGT01100000263537.b.a.a.a.b.i	ENSGT00940000156199.a.b.e	ENSGT00940000155356.c.a.a	ENSGT01010000222360.B.c	ENSGT00940000160300.o.a	ENSGT00940000157665.a.h	ENSGT00940000158631.e	ENSGT00940000158981.j	ENSGT00510000046843.a.b.j	ENSGT00950000183003.a.b.e.a.a	ENSGT00940000165935.e
River trout	MODERN SPECIES	20	ENSSTUG00000042313	tmem269 (ENSSTUG00000042259)	HSPG2 (ENSSTUG00000036522)	casp9 (ENSSTUG00000036266)	DNAJC16 (ENSSTUG00000035903)	agmat (ENSSTUG00000035856)	pink1 (ENSSTUG00000035841)	cdaa (ENSSTUG00000035802)	ENSSTUG00000035789	fam43b (ENSSTUG00000035775)	ENSSTUG00000035763	mul1b (ENSSTUG00000035740)	ENSSTUG00000035726	VWA5B1 (ENSSTUG00000035691)	ENSSTUG00000035674	ddx19a (ENSSTUG00000035452) #21	ENSSTUG00000035440	ENSSTUG00000035402	cptp (ENSSTUG00000035388)	ints11 (ENSSTUG00000034737)	ENSSTUG00000034709	ACAP3 (ENSSTUG00000032826)	HIPK1 (ENSSTUG00000032350)	ENSSTUG00000032270	sdf4 (ENSSTUG00000032231)	c1qtnf12 (ENSSTUG00000032165)	SYT6 (ENSSTUG00000032141)	klhl21 (ENSSTUG00000032097)	ZBTB48 (ENSSTUG00000032078)	PLEKHG5 (ENSSTUG00000032043)	ENSSTUG00000032012
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000073411	ENSSSAG00000073472	tmem269 (ENSSSAG00000073481)	ENSSSAG00000083643	ENSSSAG00000074254	casp9 (ENSSSAG00000073963)	SPEB (ENSSSAG00000074038)	djc16 (ENSSSAG00000073976)	PINK1 (ENSSSAG00000074044)	cdaa (ENSSSAG00000116499)	ENSSSAG00000074054	mul1b (ENSSSAG00000074058)	fam43b (ENSSSAG00000092023)	CAMK2N1 (ENSSSAG00000091208)	VWA5B1 (ENSSSAG00000074063)	ddx19a (ENSSSAG00000073068) #21	ENSSSAG00000074123	ENSSSAG00000074127	cptp (ENSSSAG00000074131)	ints11 (ENSSSAG00000074143)	ENSSSAG00000074210	ACAP3 (ENSSSAG00000074293)	ENSSSAG00000076868	sdf4 (ENSSSAG00000077115)	c1qtnf12 (ENSSSAG00000077128)	ENSSSAG00000111757	ENSSSAG00000077131	klhl21 (ENSSSAG00000119239)	ZBTB48 (ENSSSAG00000077142)	ENSSSAG00000090584	PLEKHG5 (ENSSSAG00000039585)
Huchen	MODERN SPECIES	852														ENSHHUG00000051924	ENSHHUG00000051921	ddx19a (ENSHHUG00000051666) #21	ENSHHUG00000051661	cptp (ENSHHUG00000051659)	ints11 (ENSHHUG00000051640)	ENSHHUG00000051637	ACAP3 (ENSHHUG00000051280)	HIPK1 (ENSHHUG00000051269)	sdf4 (ENSHHUG00000051268)	c1qtnf12 (ENSHHUG00000051267)	olfml3a (ENSHHUG00000051266)	SYT6 (ENSHHUG00000051253)	klhl21 (ENSHHUG00000051242)	ZBTB48 (ENSHHUG00000051240)	ENSHHUG00000051236
Salmoninae	ANCESTRAL SPECIES	113									ENSGT00390000001206.j	ENSGT00390000000911.h.a.f	ENSGT01050000244971.B.b	ENSGT00940000162826.a	ENSGT00390000012141.b.f	ENSGT00940000158938.e.b	ENSGT00990000208651	ENSGT00940000154417.c.h #21	ENSGT00390000012939	ENSGT00940000165549.j	ENSGT00940000157644.j	ENSGT01100000263537.b.a.a.a.b.j	ENSGT00940000156199.a.b.f	ENSGT00940000155356.c.a.b	ENSGT01010000222360.B.d	ENSGT00940000160300.o.b	ENSGT00940000158083.a.e	ENSGT00940000157665.a.g	ENSGT00940000158631.f	ENSGT00940000158981.i	ENSGT00940000153668.A	ENSGT00510000046843.a.b.i	ENSGT00950000183003.a.b.f
Salmoninae_a	ANCESTRAL SPECIES	14	ENSGT00940000164219.f.a	ENSGT00940000167346.b	ENSGT00390000001969.a.c.b	ENSGT00940000156496.a.b.g	ENSGT00940000154169.B.b.a	ENSGT00940000156670.e.b	ENSGT00940000159698.e	ENSGT00940000155851.c.a.d	ENSGT00390000001206.j	ENSGT00390000000911.h.a.f	ENSGT01050000244971.B.b	ENSGT00940000162826.a	ENSGT00390000012141.b.f	ENSGT00940000158938.e.b	ENSGT00990000208651.a	ENSGT00940000154417.c.h #21	ENSGT00390000012939	ENSGT00940000165549.j	ENSGT00940000157644.j	ENSGT01100000263537.b.a.a.a.b.j	ENSGT00940000156199.a.b.f	ENSGT00940000155356.c.a.b	ENSGT00970000193995.a.b.a	ENSGT01010000222360.B.d	ENSGT00940000160300.o.b	ENSGT00940000158083.a.e	ENSGT00940000157665.a.g	ENSGT00940000158631.f	ENSGT00940000158981.i	ENSGT00940000153668.A	ENSGT00510000046843.a.b.i
Salmo	ANCESTRAL SPECIES	4	ENSGT00940000164219.f.a	ENSGT00940000167346.b	ENSGT00390000001969.a.c.b	ENSGT00940000156496.a.b.g	ENSGT00940000154169.B.b.a	ENSGT00940000156670.e.b	ENSGT00940000159698.e	ENSGT00940000155851.c.a.d	ENSGT00390000001206.j	ENSGT00390000000911.h.a.f	ENSGT01050000244971.B.b	ENSGT00390000012141.b.f	ENSGT00990000213725	ENSGT00940000158938.e.b	ENSGT00990000208651.a	ENSGT00940000154417.c.h #21	ENSGT00390000012939	ENSGT00940000165549.j	ENSGT00990000210639	ENSGT00940000157644.j	ENSGT01100000263537.b.a.a.a.b.j	ENSGT00940000156199.a.b.f	ENSGT00940000155356.c.a.b	ENSGT00970000193995.a.b.a	ENSGT01010000222360.B.d	ENSGT00940000160300.o.b	ENSGT00940000158083.a.e	ENSGT00940000157665.a.g	ENSGT00940000158631.f	ENSGT00940000158981.i	ENSGT00940000153668.A
River trout	MODERN SPECIES	23	ENSSTUG00000027262	ENSSTUG00000027201	ptpn22 (ENSSTUG00000027169)	RSBN1 (ENSSTUG00000027135)	MAGI3 (ENSSTUG00000025774)	tmem269 (ENSSTUG00000025688)	HSPG2 (ENSSTUG00000019907)	casp9 (ENSSTUG00000019717)	DNAJC16 (ENSSTUG00000019421)	cdaa (ENSSTUG00000019378)	ENSSTUG00000019357	mul1b (ENSSTUG00000019321)	ENSSTUG00000019313	VWA5B1 (ENSSTUG00000019301)	ENSSTUG00000019289	ddx19a (ENSSTUG00000018134) #21	ubxn10 (ENSSTUG00000018094)	cptp (ENSSTUG00000018090)	ENSSTUG00000018082	ENSSTUG00000018076	ints11 (ENSSTUG00000018055)	ENSSTUG00000018048	ACAP3 (ENSSTUG00000015837)	HIPK1 (ENSSTUG00000015097)	ENSSTUG00000015073	sdf4 (ENSSTUG00000015053)	c1qtnf12 (ENSSTUG00000015028)	olfml3a (ENSSTUG00000015020)	SYT6 (ENSSTUG00000015010)	klhl21 (ENSSTUG00000014982)	ZBTB48 (ENSSTUG00000014964)
Atlantic salmon	MODERN SPECIES	4	ENSSSAG00000074564	ptpn22 (ENSSSAG00000074559)	ENSSSAG00000074556	ENSSSAG00000074452	tmem269 (ENSSSAG00000074435)	ENSSSAG00000111302	ENSSSAG00000074221	ENSSSAG00000073538	PINK1 (ENSSSAG00000101152)	cdaa (ENSSSAG00000073503)	mul1b (ENSSSAG00000073488)	fam43b (ENSSSAG00000084857)	ENSSSAG00000073487	ENSSSAG00000085908	VWA5B1 (ENSSSAG00000073470)	ddx19a (ENSSSAG00000074070) #21	ENSSSAG00000073465	ubxn10 (ENSSSAG00000081961)	cptp (ENSSSAG00000097455)	ENSSSAG00000089817	ENSSSAG00000090270	ints11 (ENSSSAG00000073048)	ACAP3 (ENSSSAG00000068010)	ENSSSAG00000065141	sdf4 (ENSSSAG00000065044)	c1qtnf12 (ENSSSAG00000110692)	olfml3a (ENSSSAG00000121822)	ENSSSAG00000065007	klhl21 (ENSSSAG00000064990)	zbtb48 (ENSSSAG00000064982)	nol9 (ENSSSAG00000064949)
Oncorhynchus	ANCESTRAL SPECIES	7	ENSGT00940000164219.f.b	ENSGT00940000164219.f.a	ENSGT00940000167346.b	ENSGT00390000001969.a.c.b	ENSGT00940000156496.a.b.g	ENSGT00940000154169.B.b.a	ENSGT00940000156670.e.b	ENSGT00940000159698.e	ENSGT00940000155851.c.a.d	ENSGT00390000000911.h.a.f	ENSGT01050000244971.B.b	ENSGT00940000162826.a	ENSGT00390000012141.b.f	ENSGT00940000158938.e.b	ENSGT00990000208651.a	ENSGT00940000154417.c.h #21	ENSGT00390000012939	ENSGT00940000165549.j	ENSGT00940000157644.j	ENSGT01100000263537.b.a.a.a.b.j	ENSGT00940000156199.a.b.f	ENSGT00940000155356.c.a.b	ENSGT00970000193995.a.b.a	ENSGT01010000222360.B.d	ENSGT00940000160300.o.b	ENSGT00940000158083.a.e	ENSGT00940000157665.a.g	ENSGT00940000158631.f	ENSGT00940000158981.i	ENSGT00940000153668.A	ENSGT00510000046843.a.b.i
Rainbow trout	MODERN SPECIES	7	ptpn22 (ENSOMYG00000023462)	ENSOMYG00000023437	ENSOMYG00000023380	ENSOMYG00000058547	tmem269 (ENSOMYG00000023289)	ENSOMYG00000020136	ENSOMYG00000048816	ENSOMYG00000019523	ENSOMYG00000019341	cdaa (ENSOMYG00000019276)	ENSOMYG00000019250	fam43b (ENSOMYG00000075320)	mul1b (ENSOMYG00000019215)	VWA5B1 (ENSOMYG00000019189)	ENSOMYG00000019174	ddx19a (ENSOMYG00000018173) #21	ubxn10 (ENSOMYG00000018122)	cptp (ENSOMYG00000076213)	ENSOMYG00000018109	ENSOMYG00000018101	ENSOMYG00000056255	ENSOMYG00000011709	ENSOMYG00000011081	ENSOMYG00000010989	sdf4 (ENSOMYG00000010952)	c1qtnf12 (ENSOMYG00000010924)	ENSOMYG00000076733	olfml3a (ENSOMYG00000010913)	ENSOMYG00000010892	klhl21 (ENSOMYG00000010880)	ZBTB48 (ENSOMYG00000010865)
Oncorhynchus_a	ANCESTRAL SPECIES	9	ENSGT00390000008414.h.c	ENSGT00940000164219.f.b	ENSGT00940000167346.b	ENSGT00390000001969.a.c.b	ENSGT00940000156496.a.b.g	ENSGT00940000154169.B.b.a	ENSGT00940000156670.e.b	ENSGT00940000159698.e	ENSGT00940000155851.c.a.d	ENSGT00390000000911.h.a.f	ENSGT01050000244971.B.b	ENSGT00940000162826.a	ENSGT00390000012141.b.f	ENSGT00940000158938.e.b	ENSGT00990000208651.a	ENSGT00940000154417.c.h #21	ENSGT00390000012939	ENSGT00940000165549.j	ENSGT00940000157644.j	ENSGT01100000263537.b.a.a.a.b.j	ENSGT00940000156199.a.b.f	ENSGT00940000155356.c.a.b	ENSGT00970000193995.a.b.a	ENSGT01010000222360.B.d	ENSGT00940000160300.o.b	ENSGT00940000158083.a.e	ENSGT00940000157665.a.g	ENSGT00940000158631.f	ENSGT00940000158981.i	ENSGT00940000153668.A	ENSGT00510000046843.a.b.i
Coho salmon	MODERN SPECIES	16	ENSOKIG00005025665	ENSOKIG00005025531	ptpn22 (ENSOKIG00005025472)	RSBN1 (ENSOKIG00005025436)	MAGI3 (ENSOKIG00005024781)	tmem269 (ENSOKIG00005024687)	HSPG2 (ENSOKIG00005015439)	casp9 (ENSOKIG00005014850)	DNAJC16 (ENSOKIG00005014641)	cdaa (ENSOKIG00005014585)	ENSOKIG00005014574	fam43b (ENSOKIG00005014555)	mul1b (ENSOKIG00005014544)	VWA5B1 (ENSOKIG00005014535)	ENSOKIG00005014518	ddx19a (ENSOKIG00005013828) #21	ubxn10 (ENSOKIG00005013781)	cptp (ENSOKIG00005013776)	ENSOKIG00005013766	ENSOKIG00005013759	ints11 (ENSOKIG00005013726)	ENSOKIG00005013714	ACAP3 (ENSOKIG00005007351)	HIPK1 (ENSOKIG00005006852)	ENSOKIG00005006804	sdf4 (ENSOKIG00005006746)	c1qtnf12 (ENSOKIG00005006720)	olfml3a (ENSOKIG00005006713)	SYT6 (ENSOKIG00005006701)	klhl21 (ENSOKIG00005006672)	ZBTB48 (ENSOKIG00005006657)
Chinook salmon	MODERN SPECIES	14	ENSOTSG00005010495	ptpn22 (ENSOTSG00005010493)	RSBN1 (ENSOTSG00005010491)	MAGI3 (ENSOTSG00005010458)	tmem269 (ENSOTSG00005010451)	HSPG2 (ENSOTSG00005009946)	casp9 (ENSOTSG00005009913)	DNAJC16 (ENSOTSG00005009793)	cdaa (ENSOTSG00005009774)	ENSOTSG00005009773	ENSOTSG00005009772	fam43b (ENSOTSG00005009771)	mul1b (ENSOTSG00005009770)	VWA5B1 (ENSOTSG00005009769)	ENSOTSG00005009766	ddx19a (ENSOTSG00005008514) #21	ubxn10 (ENSOTSG00005008510)	cptp (ENSOTSG00005008509)	ints11 (ENSOTSG00005008508)	ENSOTSG00005008507	ACAP3 (ENSOTSG00005003921)	HIPK1 (ENSOTSG00005002695)	ENSOTSG00005002675	sdf4 (ENSOTSG00005002672)	c1qtnf12 (ENSOTSG00005002667)	olfml3a (ENSOTSG00005002666)	SYT6 (ENSOTSG00005002665)	klhl21 (ENSOTSG00005002620)	ZBTB48 (ENSOTSG00005002614)	NOL9 (ENSOTSG00005002610)	PLEKHG5 (ENSOTSG00005002596)
Huchen	MODERN SPECIES	975	ENSHHUG00000033663	ENSHHUG00000033604	ptpn22 (ENSHHUG00000033595)	RSBN1 (ENSHHUG00000033583)	MAGI3 (ENSHHUG00000033263)	tmem269 (ENSHHUG00000033238)	HSPG2 (ENSHHUG00000032952)	casp9 (ENSHHUG00000032935)	DNAJC16 (ENSHHUG00000032887)	agmat (ENSHHUG00000032880)	pink1 (ENSHHUG00000032876)	ENSHHUG00000032558	fam43b (ENSHHUG00000032548)	mul1b (ENSHHUG00000032542)	VWA5B1 (ENSHHUG00000032540)	ddx19a (ENSHHUG00000031734) #21	ubxn10 (ENSHHUG00000031713)	cptp (ENSHHUG00000031704)	ints11 (ENSHHUG00000031692)	ENSHHUG00000031688	ENSHHUG00000031686	ACAP3 (ENSHHUG00000030832)	HIPK1 (ENSHHUG00000030782)	CCDC42 (ENSHHUG00000030776)	sdf4 (ENSHHUG00000030773)	c1qtnf12 (ENSHHUG00000030756)	ENSHHUG00000030752	SYT6 (ENSHHUG00000030642)
Northern pike	MODERN SPECIES	11	MAGI3 (ENSELUG00000004406)	ENSELUG00000004432	tmem269 (ENSELUG00000004459)	HSPG2 (ENSELUG00000004532)	casp9 (ENSELUG00000004569)	DNAJC16 (ENSELUG00000004587)	agmat (ENSELUG00000004608)	pink1 (ENSELUG00000004625)	cdaa (ENSELUG00000030887)	ENSELUG00000004668	ENSELUG00000004681	fam43b (ENSELUG00000004688)	mul1b (ENSELUG00000004693)	VWA5B1 (ENSELUG00000004715)	ENSELUG00000004729	ddx19a (ENSELUG00000004740) #21	ubxn10 (ENSELUG00000027926)	cptp (ENSELUG00000004757)	ints11 (ENSELUG00000004815)	ENSELUG00000004765	ACAP3 (ENSELUG00000004943)	HIPK1 (ENSELUG00000005094)	ENSELUG00000005146	sdf4 (ENSELUG00000005177)	c1qtnf12 (ENSELUG00000005204)	olfml3a (ENSELUG00000005221)	ENSELUG00000032827	SYT6 (ENSELUG00000005251)	klhl21 (ENSELUG00000005286)	ENSELUG00000005317	NOL9 (ENSELUG00000005350)
Osteoglossiformes	ANCESTRAL SPECIES	118	ENSGT00940000156496.a.b	ENSGT00940000158791	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00940000159698	ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT00940000154417.c #21	ENSGT01060000249781	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000155356.c	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A
Asian bonytongue	MODERN SPECIES	10	ENSSFOG00015028661	RSBN1 (ENSSFOG00015026338)	MAGI3 (ENSSFOG00015016839)	LRIG2 (ENSSFOG00015016889)	tmem269 (ENSSFOG00015032484)	HSPG2 (ENSSFOG00015016935)	casp9 (ENSSFOG00015017081)	DNAJC16 (ENSSFOG00015017141)	agmat (ENSSFOG00015017225)	pink1 (ENSSFOG00015017241)	cdab (ENSSFOG00015029652)	ENSSFOG00015017593	fam43b (ENSSFOG00015020495)	camk2n1 (ENSSFOG00015020505)	VWA5B1 (ENSSFOG00015020524)	ddx19a (ENSSFOG00015020543) #21	ENSSFOG00015020572	ubxn10 (ENSSFOG00015020582)	cptp (ENSSFOG00015026523)	ints11 (ENSSFOG00015020610)	ENSSFOG00015032122	acap3b (ENSSFOG00015020676)	UBE2J2 (ENSSFOG00015024500)	ENSSFOG00015032250	HIPK1 (ENSSFOG00015020751)	sdf4 (ENSSFOG00015020827)	c1qtnf12 (ENSSFOG00015020847)	olfml3a (ENSSFOG00015020855)	SYT6 (ENSSFOG00015020861)	klhl21 (ENSSFOG00015020873)	ZBTB48 (ENSSFOG00015024225)
P. kingsleyae	MODERN SPECIES	3	tmem269 (ENSPKIG00000010608)	HSPG2 (ENSPKIG00000009289)	ENSPKIG00000008591	casp9 (ENSPKIG00000008565)	ENSPKIG00000008550	DNAJC16 (ENSPKIG00000008526)	agmat (ENSPKIG00000008505)	pink1 (ENSPKIG00000008461)	CDA (ENSPKIG00000008437)	ENSPKIG00000008418	ENSPKIG00000008392	fam43b (ENSPKIG00000008376)	camk2n1 (ENSPKIG00000008363)	VWA5B1 (ENSPKIG00000008315)	ENSPKIG00000008297	ddx19a (ENSPKIG00000008220) #21	ubxn10 (ENSPKIG00000008174)	cptp (ENSPKIG00000008154)	ENSPKIG00000008142	ints11 (ENSPKIG00000008091)	acap3b (ENSPKIG00000007957)	ube2j2 (ENSPKIG00000007880)	HIPK1 (ENSPKIG00000007783)	nmnat1 (ENSPKIG00000007734)	sdf4 (ENSPKIG00000007691)	c1qtnf12 (ENSPKIG00000007658)	olfml3a (ENSPKIG00000007644)	SYT6 (ENSPKIG00000007589)	klhl21 (ENSPKIG00000007526)	ZBTB48 (ENSPKIG00000007498)	NOL9 (ENSPKIG00000007469)
Spotted gar	MODERN SPECIES	664	tmem269 (ENSLOCG00000001653)	ENSLOCG00000001674	USP48 (ENSLOCG00000001685)	LDLRAD2 (ENSLOCG00000001757)	HSPG2 (ENSLOCG00000001778)	casp9 (ENSLOCG00000001860)	DNAJC16 (ENSLOCG00000001888)	agmat (ENSLOCG00000001924)	pink1 (ENSLOCG00000001952)	cdab (ENSLOCG00000001971)	ENSLOCG00000001987	ENSLOCG00000002018	fam43b (ENSLOCG00000018080)	mul1b (ENSLOCG00000002052)	VWA5B1 (ENSLOCG00000002077)	ddx19a (ENSLOCG00000002118) #21	ubxn10 (ENSLOCG00000002149)	cptp (ENSLOCG00000002163)	ints11 (ENSLOCG00000002177)	ENSLOCG00000018081	PUSL1 (ENSLOCG00000002210)	acap3b (ENSLOCG00000002244)	ube2j2 (ENSLOCG00000002308)	ENSLOCG00000002323	b3galt6 (ENSLOCG00000018082)	sdf4 (ENSLOCG00000002339)	ENSLOCG00000002351	ENSLOCG00000002391	ENSLOCG00000002419	efhd2 (ENSLOCG00000002453)	taf10 (ENSLOCG00000002478)
Actinopterygii	ANCESTRAL SPECIES	809															ENSGT00940000164150	ENSGT00940000154417.d #21	ENSGT01090000260288
Neopterygii	ANCESTRAL SPECIES	636															ENSGT00940000164150	ENSGT00940000154417.d #21	ENSGT01090000260288
Osteoglossocephalai	ANCESTRAL SPECIES	717															ENSGT00940000164150	ENSGT00940000154417.d #21	ENSGT01090000260288
Clupeocephala	ANCESTRAL SPECIES	283	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a	ENSGT00940000155264	ENSGT00990000203541.a.a.b.h	ENSGT00940000159650	ENSGT00940000156194.m.b	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173
Otomorpha	ANCESTRAL SPECIES	347	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a	ENSGT00940000155264	ENSGT00990000203541.a.a.b.h	ENSGT00940000159650	ENSGT00940000156194.m.b	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.B.a	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a
Otophysi	ANCESTRAL SPECIES	92											ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.B.a	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT01090000260288	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173.e	ENSGT00940000155356.d	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a	ENSGT00940000155264	ENSGT00990000203541.a.a.b.h	ENSGT00940000159650	ENSGT00940000156194.m.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000154557
Characiphysae	ANCESTRAL SPECIES	29	ENSGT00940000161109.s.a	ENSGT00950000182835.d.a.k.a	ENSGT00390000011648.b	ENSGT00940000157392.o.b	ENSGT00530000063868.a.b	ENSGT00940000158436	ENSGT00940000155241.d	ENSGT00730000111360.b	ENSGT01030000234812.a	ENSGT00940000155189.pb.a	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.B.a	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT01090000260288	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173.f	ENSGT00940000155356.c	ENSGT00940000155356.d	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a	ENSGT00940000155264	ENSGT00990000203541.a.a.b.h	ENSGT00940000159650	ENSGT00940000156194.m.b	ENSGT01030000234555.a.a.b.a.a.a.b
Channel catfish	MODERN SPECIES	13	id1 (ENSIPUG00000023852)	PFKFB2 (ENSIPUG00000023854)	phtf1 (ENSIPUG00000023863)	cishb (ENSIPUG00000023872)	twf2b (ENSIPUG00000023875)	rpusd4 (ENSIPUG00000023879)	QRICH1 (ENSIPUG00000023882)	ENSIPUG00000023887	ENSIPUG00000023889	TMCC1 (ENSIPUG00000023892)	DNAJC16 (ENSIPUG00000023896)	Cda (ENSIPUG00000023900)	ENSIPUG00000023904	ENSIPUG00000023906	camk2n1 (ENSIPUG00000023911)	ddx19b (ENSIPUG00000023912) #21	ENSIPUG00000023919	pusl1 (ENSIPUG00000023921)	acap3b (ENSIPUG00000023923)	UB2J2 (ENSIPUG00000023930)	HIPK1 (ENSIPUG00000023934)	ENSIPUG00000023948	b3galt6 (ENSIPUG00000023945)	tmem167b (ENSIPUG00000023949)	ENSIPUG00000023950	srpk1b (ENSIPUG00000023963)	ENSIPUG00000023982	kif21b (ENSIPUG00000023985)	cpne5b (ENSIPUG00000023995)	ADORA1 (ENSIPUG00000023999)	ENSIPUG00000024004
Characiphysae_b	ANCESTRAL SPECIES	26	ENSGT00940000161109.s.a	ENSGT00950000182835.d.a.k.a	ENSGT00390000011648.b	ENSGT00940000157392.o.b	ENSGT00530000063868.a.b	ENSGT00940000158436	ENSGT00940000155241.d	ENSGT00730000111360.b	ENSGT01030000234812.a	ENSGT00940000155189.pb.a	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.B.a	ENSGT01090000260288	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173.f	ENSGT00940000155356.c	ENSGT00940000155356.d	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a	ENSGT00940000155264	ENSGT00990000203541.a.a.b.h	ENSGT00940000159650	ENSGT00940000156194.m.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263533.b.b.a.a.b.a.a.a.a.b
Characoidei	ANCESTRAL SPECIES	15	ENSGT00950000183021.a.b.d	ENSGT00940000161109.s.a	ENSGT00950000182835.d.a.k.a	ENSGT00390000011648.b	ENSGT00940000157392.o.b	ENSGT00530000063868.a.b	ENSGT00940000158436	ENSGT00940000155241.d	ENSGT00730000111360.b	ENSGT01030000234812.a	ENSGT00940000155189.pb.a	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173.f	ENSGT00940000155356.d	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a	ENSGT00940000155264	ENSGT00990000203541.a.a.b.h	ENSGT00940000159650	ENSGT00940000156194.m.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263533.b.b.a.a.b.a.a.a.a.b	ENSGT00940000154557
Red-bellied piranha	MODERN SPECIES	793													ENSPNAG00000024302	camk2n1 (ENSPNAG00000024359)	ENSPNAG00000024374	ddx19b (ENSPNAG00000024426) #21	PUSL1 (ENSPNAG00000024441)	ACAP3 (ENSPNAG00000006250)	ube2j2 (ENSPNAG00000024700)
Mexicana tetra	MODERN SPECIES	14	id1 (ENSAMXG00000030460)	PFKFB2 (ENSAMXG00000032440)	phtf1 (ENSAMXG00000006946)	cishb (ENSAMXG00000041177)	twf2b (ENSAMXG00000006961)	rpusd4 (ENSAMXG00000031479)	qrich1 (ENSAMXG00000006971)	ENSAMXG00000032492	ENSAMXG00000033226	tmcc1b (ENSAMXG00000037453)	DNAJC16 (ENSAMXG00000006988)	cdab (ENSAMXG00000032243)	ENSAMXG00000040059	camk2n1 (ENSAMXG00000037288)	ENSAMXG00000033888	ddx19b (ENSAMXG00000043100) #21	ENSAMXG00000044007	ENSAMXG00000034360	acap3b (ENSAMXG00000007047)	ENSAMXG00000029985	b3galt6 (ENSAMXG00000025180)	ENSAMXG00000007063	tmem167b (ENSAMXG00000042007)	mapk14b (ENSAMXG00000007071)	srpk1b (ENSAMXG00000007076)	LHFPL5 (ENSAMXG00000036005)	KIF21B (ENSAMXG00000007105)	ENSAMXG00000038591	ENSAMXG00000031776	cpne5b (ENSAMXG00000007156)	ADORA1 (ENSAMXG00000031102)
Electric eel	MODERN SPECIES	444											ENSEEEG00000008520	ENSEEEG00000008051	ENSEEEG00000008039	camk2n1 (ENSEEEG00000008036)	ENSEEEG00000008034	ddx19b (ENSEEEG00000007113) #21	PUSL1 (ENSEEEG00000007058)	acap3b (ENSEEEG00000007054)	UBE2J2 (ENSEEEG00000007051)	HIPK1 (ENSEEEG00000007035)	b3galt6 (ENSEEEG00000007029)	tmem167b (ENSEEEG00000007027)	ENSEEEG00000006969	srpk1b (ENSEEEG00000006954)	LHFPL5 (ENSEEEG00000006952)	KIF21B (ENSEEEG00000006950)	cpne5b (ENSEEEG00000006942)	ADORA1 (ENSEEEG00000006939)	ENSEEEG00000006938
Cyprinoidei	ANCESTRAL SPECIES	79	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00940000157448	ENSGT00390000018321	ENSGT00940000159273	ENSGT00940000158320	ENSGT00390000003017.c.a	ENSGT00390000009630	ENSGT00940000156315.e.b	ENSGT00940000154554.a.f	ENSGT00940000154554.a.e	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.B.a	ENSGT00940000154417.d #21	ENSGT01090000260288	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173.e	ENSGT00940000155356.d	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a	ENSGT00940000155264	ENSGT00990000203541.a.a.b.h	ENSGT00940000159650	ENSGT00940000156194.m.b
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	245	ENSGT00990000210161	ENSGT00390000011228.b.a.e.a.a	ENSGT00940000156378.a.a.b	ENSGT00940000157448.e	ENSGT00390000018321.e	ENSGT00940000159273.f	ENSGT00390000003017.c.a.e	ENSGT00390000009630.o	ENSGT00940000156315.e.b.c	ENSGT00940000154554.a.f.c	ENSGT00940000154554.a.e	ENSGT00940000155851.c.b.a	ENSGT00390000000911.h.b.c	ENSGT01050000244971.B.a.a.b	ENSGT00390000004940.a.b.i	ENSGT00940000154417.d.a.a #21	ENSGT01090000260288.a	ENSGT00940000154417.d.b #21	ENSGT01090000260288.b	ENSGT00940000154417.d.a.b #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a.a	ENSGT00940000156173.e	ENSGT00940000155356.d.c	ENSGT00940000162229.b	ENSGT00940000162196.i	ENSGT00940000155325.b.b	ENSGT00940000155264.c.b	ENSGT00990000203541.a.a.b.h	ENSGT00940000159650.d	ENSGT00940000156194.m.b.b
Cyprininae_a	ANCESTRAL SPECIES	161	ENSGT00390000018321.e	ENSGT00940000159273.f	ENSGT00940000158320.r	ENSGT00390000003017.c.a.e.a	ENSGT00390000009630.o	ENSGT00940000156315.e.b.c	ENSGT00940000154554.a.f.c	ENSGT00940000154554.a.e.a	ENSGT00940000155851.c.b.a	ENSGT00390000000911.h.b.c	ENSGT00990000205730	ENSGT00390000004940.a.b.j.b.a	ENSGT01090000260288.a	ENSGT01050000244971.B.a.a.b	ENSGT00390000004940.a.b.i	ENSGT00940000154417.d.a.a #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a.a	ENSGT00940000155356.d.c	ENSGT00940000162229.b	ENSGT00940000162196.i	ENSGT00940000155325.a.b.b	ENSGT00940000155325.b.b	ENSGT00940000155264.c.b	ENSGT00990000203541.a.a.b.h	ENSGT00940000159650.d	ENSGT00940000156194.m.b.b	ENSGT00940000161979.B.o.a.a	ENSGT00940000155218.A.c.d	ENSGT00390000005939.a.b.b.a	ENSGT00940000156490.b.b.a
Golden-line barbel	MODERN SPECIES	1804								ENSSGRG00000018519	ENSSGRG00000018518	ENSSGRG00000018517	DNAJC16 (ENSSGRG00000018485)	cdab (ENSSGRG00000018480)	ENSSGRG00000018479	camk2n1 (ENSSGRG00000018478)	ENSSGRG00000018477	ddx19b (ENSSGRG00000017052) #21	ENSSGRG00000017042
Common carp reference	MODERN SPECIES	42	ENSCCRG00000023734	nek4 (ENSCCRG00000047359)	spcs1 (ENSCCRG00000033515)	glt8d1 (ENSCCRG00000023725)	gnl3 (ENSCCRG00000047349)	PBRM1 (ENSCCRG00000022099)	rpn1 (ENSCCRG00000021056)	gata2a (ENSCCRG00000071341)	ENSCCRG00000046289	ENSCCRG00000046318	ENSCCRG00000046293	ENSCCRG00000074408	ENSCCRG00000078222	camk2n1 (ENSCCRG00000082890)	PUSL1 (ENSCCRG00000030849)	ddx19b (ENSCCRG00000030855) #21	ENSCCRG00000044703	ACAP3 (ENSCCRG00000051977)	UBE2J2 (ENSCCRG00000037899)	ENSCCRG00000052293	b3galt6 (ENSCCRG00000072978)	ENSCCRG00000049289	srpk1b (ENSCCRG00000013174)	ENSCCRG00000013172	ENSCCRG00000010692	cpne5b (ENSCCRG00000053915)	ENSCCRG00000005814	ENSCCRG00000005823	ENSCCRG00000060508	bmp7a (ENSCCRG00000042070)	smim7 (ENSCCRG00000042090)
Cyprininae	ANCESTRAL SPECIES	245	ENSGT00390000018321.e	ENSGT00940000159273.f	ENSGT00390000003017.c.a.e	ENSGT00390000009630.o	ENSGT00940000156315.e.b.c	ENSGT00940000154554.a.f.c	ENSGT00940000154554.a.e	ENSGT00940000155851.c.b.a	ENSGT00390000000911.h.b.c	ENSGT01050000244971.B.a.a.b	ENSGT00390000004940.a.b.i	ENSGT00940000154417.d.a.a #21	ENSGT01090000260288.a	ENSGT00940000154417.d.b #21	ENSGT01090000260288.b	ENSGT00940000154417.d.a.b #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a.a	ENSGT00940000156173.e	ENSGT00940000155356.d.c	ENSGT00940000162229.b	ENSGT00940000162196.i	ENSGT00940000155325.b.b	ENSGT00940000155264.c.b	ENSGT00990000203541.a.a.b.h	ENSGT00940000159650.d	ENSGT00940000156194.m.b.b	ENSGT00940000161979.B.o.a.a	ENSGT00940000155218.A.c.d	ENSGT00940000165182.d.a	ENSGT00390000005939.a.b.b.a
Goldfish	MODERN SPECIES	29	ENSCARG00000057123	CAMK1 (ENSCARG00000054633)	nek4 (ENSCARG00000054450)	spcs1 (ENSCARG00000054424)	glt8d1 (ENSCARG00000054403)	rpn1 (ENSCARG00000053864)	gata2a (ENSCARG00000053825)	ENSCARG00000053814	ENSCARG00000053804	itih3a.1 (ENSCARG00000053417)	DNAJC16 (ENSCARG00000052870)	cdab (ENSCARG00000052820)	ENSCARG00000052810	camk2n1 (ENSCARG00000052791)	ENSCARG00000052758	ddx19b (ENSCARG00000052011) #21	ENSCARG00000051956	acap3b (ENSCARG00000040891)	HIPK1 (ENSCARG00000040263)	b3galt6 (ENSCARG00000040228)	tmem167b (ENSCARG00000040215)	MAPK14 (ENSCARG00000039790)	srpk1b (ENSCARG00000035379)	ENSCARG00000035307	LHFPL5 (ENSCARG00000035300)	KIF21B (ENSCARG00000025853)	ENSCARG00000025543	cpne5b (ENSCARG00000025486)	ENSCARG00000025474	ENSCARG00000025434	ENSCARG00000025426
Cyprininae_a	ANCESTRAL SPECIES	751												ENSGT01050000244971.A.d.a.a.e	ENSGT01050000244971.B.a.a.a	ENSGT00940000154417.d.b #21	ENSGT01090000260288.b	ENSGT00940000154417.d.a.b #21
Golden-line barbel	MODERN SPECIES	551								ITIH3 (ENSSGRG00000029430)	itih3a.1 (ENSSGRG00000029429)	DNAJC16 (ENSSGRG00000029173)	cdab (ENSSGRG00000029164)	ENSSGRG00000028863	ENSSGRG00000028848	camk2n1 (ENSSGRG00000028842)	ENSSGRG00000028840	ddx19b (ENSSGRG00000028449) #21	ENSSGRG00000028445	ENSSGRG00000028444	acap3b (ENSSGRG00000028441)	UBE2J2 (ENSSGRG00000028434)	ENSSGRG00000028433	b3galt6 (ENSSGRG00000028431)	ENSSGRG00000028429	tmem167b (ENSSGRG00000028428)	ENSSGRG00000028427	ENSSGRG00000028426	srpk1b (ENSSGRG00000028423)	KIF21B (ENSSGRG00000028279)	cpne5b (ENSSGRG00000028278)
Cyprininae	ANCESTRAL SPECIES	245	ENSGT00940000156378.a.a.b	ENSGT00940000157448.e	ENSGT00390000018321.e	ENSGT00940000159273.f	ENSGT00390000003017.c.a.e	ENSGT00390000009630.o	ENSGT00940000156315.e.b.c	ENSGT00940000154554.a.f.c	ENSGT00940000154554.a.e	ENSGT00940000155851.c.b.a	ENSGT00390000000911.h.b.c	ENSGT01050000244971.B.a.a.b	ENSGT00390000004940.a.b.i	ENSGT00940000154417.d.a.a #21	ENSGT01090000260288.a	ENSGT00940000154417.d.b #21	ENSGT01090000260288.b	ENSGT00940000154417.d.a.b #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a.a	ENSGT00940000156173.e	ENSGT00940000155356.d.c	ENSGT00940000162229.b	ENSGT00940000162196.i	ENSGT00940000155325.b.b	ENSGT00940000155264.c.b	ENSGT00990000203541.a.a.b.h	ENSGT00940000159650.d	ENSGT00940000156194.m.b.b	ENSGT00940000161979.B.o.a.a	ENSGT00940000155218.A.c.d
Goldfish	MODERN SPECIES	2461	nek4 (ENSCARG00000066707)	spcs1 (ENSCARG00000066693)	glt8d1 (ENSCARG00000066673)	gnl3 (ENSCARG00000066663)	PBRM1 (ENSCARG00000066430)	rpn1 (ENSCARG00000066186)	gata2a (ENSCARG00000066174)	ENSCARG00000066025	DNAJC16 (ENSCARG00000065607)	cdab (ENSCARG00000065572)	ENSCARG00000065569	ENSCARG00000065560	camk2n1 (ENSCARG00000065556)	ENSCARG00000065551	ENSCARG00000065544	ddx19b (ENSCARG00000065318) #21	acap3b (ENSCARG00000064560)	HIPK1 (ENSCARG00000064409)	b3galt6 (ENSCARG00000064400)	ENSCARG00000064390	tmem167b (ENSCARG00000064379)	MAPK14 (ENSCARG00000063961)	srpk1b (ENSCARG00000063704)	KIF21B (ENSCARG00000063454)	cpne5b (ENSCARG00000062732)	ENSCARG00000062673	ENSCARG00000062666	ENSCARG00000062660	bmp7a (ENSCARG00000062631)	smim7 (ENSCARG00000062612)	tmem38a (ENSCARG00000062591)
Cyprininae_a	ANCESTRAL SPECIES	751														ENSGT01050000244971.A.d.a.a.e	ENSGT01050000244971.B.a.a.a	ENSGT00940000154417.d.b #21	ENSGT01090000260288.b	ENSGT00940000154417.d.a.b #21
Common carp reference	MODERN SPECIES	13	ccdc3b (ENSCCRG00000065655)	ENSCCRG00000047362	nek4 (ENSCCRG00000023731)	spcs1 (ENSCCRG00000023728)	gnl3 (ENSCCRG00000023714)	PBRM1 (ENSCCRG00000008802)	rpn1 (ENSCCRG00000007952)	gata2a (ENSCCRG00000059592)	itih3a.1 (ENSCCRG00000022078)	ENSCCRG00000068600	ENSCCRG00000042413	ENSCCRG00000078736	cdab (ENSCCRG00000067398)	ENSCCRG00000074024	ENSCCRG00000063506	ddx19b (ENSCCRG00000047062) #21	ENSCCRG00000047110	ENSCCRG00000047296	ENSCCRG00000060920	b3galt6 (ENSCCRG00000064382)	ENSCCRG00000071443	ENSCCRG00000025260	srpk1b (ENSCCRG00000025390)	ENSCCRG00000030984	ENSCCRG00000066820	cpne5b (ENSCCRG00000005799)	ENSCCRG00000009671	ENSCCRG00000070886	ENSCCRG00000029292	bmp7a (ENSCCRG00000029298)	thop1 (ENSCCRG00000081203)
Zebrafish	MODERN SPECIES	2	nek4 (ENSDARG00000040152)	spcs1 (ENSDARG00000059298)	glt8d1 (ENSDARG00000040157)	gnl3 (ENSDARG00000006219)	PBRM1 (ENSDARG00000003877)	rpn1 (ENSDARG00000059323)	gata2a (ENSDARG00000059327)	ENSDARG00000055053	itih3a.1 (ENSDARG00000055036)	DNAJC16 (ENSDARG00000060725)	cdab (ENSDARG00000038199)	ENSDARG00000055014	ENSDARG00000055011	camk2n1 (ENSDARG00000101387)	ENSDARG00000115782	ddx19b (ENSDARG00000005699) #21	ENSDARG00000074565	acap3b (ENSDARG00000099240)	mcrs1 (ENSDARG00000020840)	suox (ENSDARG00000091574)	tuba2 (ENSDARG00000045014)	prph (ENSDARG00000028306)	sarnp (ENSDARG00000059357)	cdk2 (ENSDARG00000026577)	MMP19 (ENSDARG00000091557)	pmela (ENSDARG00000091298)	timeless (ENSDARG00000078497)	cpne5b (ENSDARG00000070919)	KIF21B (ENSDARG00000009733)	LHFPL5 (ENSDARG00000045023)	srpk1b (ENSDARG00000031560)
Clupeiformes	ANCESTRAL SPECIES	151										ENSGT00940000155851.c.b	ENSGT00390000000911.h.b.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01090000260288	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000169818	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a	ENSGT00940000166975.j	ENSGT00940000155325.a.a.a.b	ENSGT00940000155264	ENSGT00990000203541.a.a.b.h	ENSGT00940000159650	ENSGT00940000156194.m.b	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b
Atlantic herring	MODERN SPECIES	21	cyp24a1 (ENSCHAG00000006093)	ENSCHAG00000006248	ENSCHAG00000006283	ENSCHAG00000006389	ncoa5 (ENSCHAG00000008101)	ENSCHAG00000008125	ENSCHAG00000008144	ENSCHAG00000008206	ENSCHAG00000008735	DNAJC16 (ENSCHAG00000009637)	cdab (ENSCHAG00000011329)	cdab (ENSCHAG00000011350)	ENSCHAG00000011357	ENSCHAG00000011386	camk2n1 (ENSCHAG00000011391)	ddx19b (ENSCHAG00000011418) #21	ENSCHAG00000011872	PUSL1 (ENSCHAG00000011890)	acap3b (ENSCHAG00000012049)	ENSCHAG00000017034	UBE2J2 (ENSCHAG00000017051)	ENSCHAG00000017090	HIPK1 (ENSCHAG00000017125)	ENSCHAG00000017327	b3galt6 (ENSCHAG00000017337)	tmem167b (ENSCHAG00000017344)	ENSCHAG00000017373	srpk1b (ENSCHAG00000017518)	LHFPL5 (ENSCHAG00000018795)	KIF21B (ENSCHAG00000018875)	cpne5b (ENSCHAG00000020549)
Denticle herring	MODERN SPECIES	3	tmem167b (ENSDCDG00000030374)	mapk14b (ENSDCDG00000030172)	ENSDCDG00000029870	LHFPL5 (ENSDCDG00000029852)	KIF21B (ENSDCDG00000027277)	cpne5b (ENSDCDG00000026832)	ENSDCDG00000026813	ADORA1 (ENSDCDG00000026810)	CHIA (ENSDCDG00000026776)	DNAJC16 (ENSDCDG00000026713)	cdab (ENSDCDG00000026703)	ENSDCDG00000026701	ENSDCDG00000026673	camk2n1 (ENSDCDG00000026669)	ENSDCDG00000026663	ddx19b (ENSDCDG00000026277) #21	PUSL1 (ENSDCDG00000026265)	acap3b (ENSDCDG00000020484)	HIPK1 (ENSDCDG00000020401)	b3galt6 (ENSDCDG00000020395)	ENSDCDG00000020394	btg2 (ENSDCDG00000020393)	znf76 (ENSDCDG00000020391)	zgc:162255 (ENSDCDG00000020387)	arl8a (ENSDCDG00000020378)	GPR37L1 (ENSDCDG00000020374)	ELF3 (ENSDCDG00000020370)	apobec2a (ENSDCDG00000020366)	ENSDCDG00000020365	srsf3b (ENSDCDG00000020353)	cdkn1a (ENSDCDG00000020352)
Euteleosteomorpha	ANCESTRAL SPECIES	221	ENSGT00940000155325.a.b.a	ENSGT00940000155264	ENSGT00990000203541.a.a.b.h	ENSGT00940000159650	ENSGT00940000156194.m.b	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111
Acanthomorphata	ANCESTRAL SPECIES	32	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.b.a	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b	ENSGT00940000163961.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	1	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.b.a	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b
Percomorphaceae	ANCESTRAL SPECIES	1	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.b.a	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	295	ENSHCOG00000009460	ADORA1 (ENSHCOG00000009476)	ENSHCOG00000009493	cpne5b (ENSHCOG00000009689)	KIF21B (ENSHCOG00000009750)	LHFPL5 (ENSHCOG00000009766)	srpk1b (ENSHCOG00000009791)	mapk14b (ENSHCOG00000009841)	tmem167b (ENSHCOG00000009858)	dnali1 (ENSHCOG00000000305)	b3galt6 (ENSHCOG00000009883)	DNAJC16 (ENSHCOG00000009893)	cdab (ENSHCOG00000009916)	camk2n1 (ENSHCOG00000009926)	ENSHCOG00000009940	ddx19b (ENSHCOG00000009963) #21	ENSHCOG00000009975	ddx19b (ENSHCOG00000010002) #21	PUSL1 (ENSHCOG00000010077)	acap3b (ENSHCOG00000010123)	ube2j2 (ENSHCOG00000010139)	ENSHCOG00000010173	ENSHCOG00000010192	HIPK1 (ENSHCOG00000010224)	ENSHCOG00000010238	DNAJC11 (ENSHCOG00000010265)	ENSHCOG00000010274	ENSHCOG00000010284	slc48a1b (ENSHCOG00000010300)	ENSHCOG00000010329	ENSHCOG00000010352
Tiger tail seahorse	MODERN SPECIES	295	ENSHCOG00000009493	cpne5b (ENSHCOG00000009689)	KIF21B (ENSHCOG00000009750)	LHFPL5 (ENSHCOG00000009766)	srpk1b (ENSHCOG00000009791)	mapk14b (ENSHCOG00000009841)	tmem167b (ENSHCOG00000009858)	dnali1 (ENSHCOG00000000305)	b3galt6 (ENSHCOG00000009883)	DNAJC16 (ENSHCOG00000009893)	cdab (ENSHCOG00000009916)	camk2n1 (ENSHCOG00000009926)	ENSHCOG00000009940	ddx19b (ENSHCOG00000009963) #21	ENSHCOG00000009975	ddx19b (ENSHCOG00000010002) #21	PUSL1 (ENSHCOG00000010077)	acap3b (ENSHCOG00000010123)	ube2j2 (ENSHCOG00000010139)	ENSHCOG00000010173	ENSHCOG00000010192	HIPK1 (ENSHCOG00000010224)	ENSHCOG00000010238	DNAJC11 (ENSHCOG00000010265)	ENSHCOG00000010274	ENSHCOG00000010284	slc48a1b (ENSHCOG00000010300)	ENSHCOG00000010329	ENSHCOG00000010352	vdrb (ENSHCOG00000010402)	ENSHCOG00000000324
Percomorphaceae_B	ANCESTRAL SPECIES	3	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000237351	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Ovalentaria	ANCESTRAL SPECIES	2	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Atherinomorphae	ANCESTRAL SPECIES	2	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.b.a	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Cyprinodontiformes	ANCESTRAL SPECIES	2	ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.b.a	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Aplocheiloidei	ANCESTRAL SPECIES	12	ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b
Mangrove rivulus	MODERN SPECIES	236	ENSKMAG00000005886	ADORA1 (ENSKMAG00000005872)	cpne5b (ENSKMAG00000005767)	KIF21B (ENSKMAG00000005590)	LHFPL5 (ENSKMAG00000005529)	srpk1b (ENSKMAG00000005453)	MAPK14 (ENSKMAG00000005408)	tmem167b (ENSKMAG00000005380)	ENSKMAG00000005365	b3galt6 (ENSKMAG00000005355)	DNAJC16 (ENSKMAG00000005333)	cdab (ENSKMAG00000005318)	ENSKMAG00000005298	ENSKMAG00000005272	camk2n1 (ENSKMAG00000005258)	ddx19b (ENSKMAG00000005196) #21	PUSL1 (ENSKMAG00000005154)
Turquoise killifish	MODERN SPECIES	1619	ADORA1 (ENSNFUG00015013772)	ENSNFUG00015013766	cpne5b (ENSNFUG00015012859)	KIF21B (ENSNFUG00015011360)	ENSNFUG00015011212	LHFPL5 (ENSNFUG00015011203)	srpk1b (ENSNFUG00015010673)	MAPK14 (ENSNFUG00015009381)	tmem167b (ENSNFUG00015009252)	B3GALT6 (ENSNFUG00015009236)	DNAJC16 (ENSNFUG00015019453)	cdab (ENSNFUG00015019437)	ENSNFUG00015019436	ENSNFUG00015019433	camk2n1 (ENSNFUG00015019431)	DDX19 (ENSNFUG00015019079) #21	PUSL1 (ENSNFUG00015019047)	ENSNFUG00015019043	acap3b (ENSNFUG00015016487)	UBE2J2 (ENSNFUG00015016396)	ENSNFUG00015016393	ENSNFUG00015016387	HIPK1 (ENSNFUG00015016263)	ENSNFUG00015016218	ENSNFUG00015016233	DNAJC11 (ENSNFUG00015016019)	PHF13 (ENSNFUG00015015986)	ENSNFUG00015015965	slc48a1b (ENSNFUG00015015947)	ENSNFUG00015015906	VDRB (ENSNFUG00015015702)
Cyprinodontoidei	ANCESTRAL SPECIES	4	ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.b.a	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b
Poeciliinae	ANCESTRAL SPECIES	4	ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.b.a	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b
Poecilia	ANCESTRAL SPECIES	20	ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.b.a	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b
NAME_6	ANCESTRAL SPECIES	10	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.b.a	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b.m	ENSGT00390000004940.a.b.n	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b
Sailfin molly	MODERN SPECIES	704				LHFPL5 (ENSPLAG00000005666)	srpk1b (ENSPLAG00000005629)	mapk14b (ENSPLAG00000005605)	tmem167b (ENSPLAG00000005537)	ENSPLAG00000005512	DNAJC16 (ENSPLAG00000005469)	b3galt6 (ENSPLAG00000005378)	cdab (ENSPLAG00000005371)	ENSPLAG00000005291	ENSPLAG00000000081	camk2n1 (ENSPLAG00000004402)	camk2n1 (ENSPLAG00000004393)	ddx19b (ENSPLAG00000004378) #21	ENSPLAG00000004360	PUSL1 (ENSPLAG00000004348)	acap3b (ENSPLAG00000004337)	ube2j2 (ENSPLAG00000004286)	ENSPLAG00000004254	HIPK1 (ENSPLAG00000004242)
Amazon molly	MODERN SPECIES	615															camk2n1 (ENSPFOG00000015529)	ddx19b (ENSPFOG00000015490) #21	PUSL1 (ENSPFOG00000015448)	GPR37L1 (ENSPFOG00000015430)	atp2b4 (ENSPFOG00000015077)	HTD2 (ENSPFOG00000015044)	rpp14 (ENSPFOG00000015042)	ABHD6 (ENSPFOG00000014994)	ippk (ENSPFOG00000014926)	ENSPFOG00000014909	map1lc3a (ENSPFOG00000014880)	eif6 (ENSPFOG00000014847)	ENSPFOG00000014840	MMP24 (ENSPFOG00000014685)	fam83c (ENSPFOG00000014676)	ENSPFOG00000020619	uqcc1 (ENSPFOG00000014629)
Guppy	MODERN SPECIES	457	ADORA1 (ENSPREG00000002820)	cpne5b (ENSPREG00000002752)	KIF21B (ENSPREG00000002626)	LHFPL5 (ENSPREG00000002594)	srpk1b (ENSPREG00000002560)	mapk14b (ENSPREG00000002512)	tmem167b (ENSPREG00000002491)	ENSPREG00000002473	b3galt6 (ENSPREG00000002468)	DNAJC16 (ENSPREG00000002458)	cdab (ENSPREG00000002451)	ENSPREG00000002430	ENSPREG00000002418	camk2n1 (ENSPREG00000002393)	ENSPREG00000002383	ddx19b (ENSPREG00000002342) #21	PUSL1 (ENSPREG00000002324)	acap3b (ENSPREG00000002248)	ube2j2 (ENSPREG00000002197)	HIPK1 (ENSPREG00000002172)	ENSPREG00000002092	DNAJC11 (ENSPREG00000001996)	PHF13 (ENSPREG00000001963)	slc48a1b (ENSPREG00000001947)	ENSPREG00000001907	ENSPREG00000001881	vdrb (ENSPREG00000001838)	ENSPREG00000001790	eif4bb (ENSPREG00000001769)	ENSPREG00000001749	krt18b (ENSPREG00000001728)
Platyfish	MODERN SPECIES	12	ADORA1 (ENSXMAG00000004078)	cpne5b (ENSXMAG00000004086)	KIF21B (ENSXMAG00000019051)	ENSXMAG00000023068	LHFPL5 (ENSXMAG00000027586)	srpk1b (ENSXMAG00000027147)	mapk14b (ENSXMAG00000024923)	tmem167b (ENSXMAG00000018989)	ENSXMAG00000018988	b3galt6 (ENSXMAG00000019957)	DNAJC16 (ENSXMAG00000018964)	cdab (ENSXMAG00000029412)	ENSXMAG00000018911	ENSXMAG00000018885	camk2n1 (ENSXMAG00000018879)	ddx19b (ENSXMAG00000018853) #21	ENSXMAG00000025397	PUSL1 (ENSXMAG00000018846)	acap3b (ENSXMAG00000018796)	ube2j2 (ENSXMAG00000022063)	HIPK1 (ENSXMAG00000018751)	ENSXMAG00000018742	DNAJC11 (ENSXMAG00000018728)	PHF13 (ENSXMAG00000018723)	slc48a1b (ENSXMAG00000025467)	ENSXMAG00000019956	ENSXMAG00000018719	vdrb (ENSXMAG00000018707)	ENSXMAG00000018693	eif4bb (ENSXMAG00000018673)	ENSXMAG00000026949
NAME_4	ANCESTRAL SPECIES	7	ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.b	ENSGT00940000162196	ENSGT00940000178615	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b	ENSGT00940000163961.a.b
Mummichog	MODERN SPECIES	2276				ENSFHEG00000005836	KIF21B (ENSFHEG00000005940)	LHFPL5 (ENSFHEG00000005965)	srpk1b (ENSFHEG00000005977)	MAPK14 (ENSFHEG00000006101)	tmem167b (ENSFHEG00000006123)	b3galt6 (ENSFHEG00000006133)	DNAJC16 (ENSFHEG00000006147)	cdab (ENSFHEG00000006181)	ENSFHEG00000006240	camk2n1 (ENSFHEG00000006277)	ENSFHEG00000006292	ddx19b (ENSFHEG00000006352) #21	PUSL1 (ENSFHEG00000006370)	acap3b (ENSFHEG00000006449)	ube2j2 (ENSFHEG00000006521)	HIPK1 (ENSFHEG00000006556)	ENSFHEG00000006567	DNAJC11 (ENSFHEG00000006642)	PHF13 (ENSFHEG00000006661)	slc48a1b (ENSFHEG00000006694)	ENSFHEG00000006738	ENSFHEG00000006814	vdrb (ENSFHEG00000006854)	ENSFHEG00000006906	eif4bb (ENSFHEG00000006923)	krt18b (ENSFHEG00000006944)	ENSFHEG00000006952
Sheepshead minnow	MODERN SPECIES	989																ddx19b (ENSCVAG00000012986) #21	ENSCVAG00000012941	PUSL1 (ENSCVAG00000012923)	acap3b (ENSCVAG00000012905)	ube2j2 (ENSCVAG00000012842)	HIPK1 (ENSCVAG00000012817)	ENSCVAG00000012796	DNAJC11 (ENSCVAG00000012731)	PHF13 (ENSCVAG00000012691)	ENSCVAG00000012674	SLC48A1 (ENSCVAG00000012669)
Oryzias	ANCESTRAL SPECIES	1	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.b.a	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Oryzias_b	ANCESTRAL SPECIES	41			ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.b.a	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b
Indian medaka	MODERN SPECIES	8	ENSOMEG00000019583	tfeb (ENSOMEG00000019545)	tmem183a (ENSOMEG00000019471)	ppfia4 (ENSOMEG00000019395)	myog (ENSOMEG00000019305)	mdm4 (ENSOMEG00000019280)	ENSOMEG00000019257	per3 (ENSOMEG00000019234)	ENSOMEG00000019156	b3galt6 (ENSOMEG00000019126)	DNAJC16 (ENSOMEG00000019112)	cdab (ENSOMEG00000019061)	ENSOMEG00000019034	ENSOMEG00000018994	camk2n1 (ENSOMEG00000018989)	ddx19b (ENSOMEG00000018968) #21	ENSOMEG00000018914	PUSL1 (ENSOMEG00000018897)	acap3b (ENSOMEG00000018838)	ube2j2 (ENSOMEG00000018693)	ENSOMEG00000018669	HIPK1 (ENSOMEG00000018647)	ENSOMEG00000018528	DNAJC11 (ENSOMEG00000018394)	PHF13 (ENSOMEG00000018337)	slc48a1b (ENSOMEG00000018316)	ENSOMEG00000018303	ENSOMEG00000018241	vdrb (ENSOMEG00000018135)	ENSOMEG00000018061	eif4bb (ENSOMEG00000000454)
Javanese ricefish	MODERN SPECIES	19	HIPK1 (ENSOJAG00000006624)	ENSOJAG00000006772	cpne5b (ENSOJAG00000006930)	KIF21B (ENSOJAG00000008113)	LHFPL5 (ENSOJAG00000010458)	srpk1b (ENSOJAG00000010500)	mapk14b (ENSOJAG00000010584)	tmem167b (ENSOJAG00000011205)	ENSOJAG00000011226	b3galt6 (ENSOJAG00000011239)	DNAJC16 (ENSOJAG00000011249)	cdab (ENSOJAG00000011302)	ENSOJAG00000011315	ENSOJAG00000011337	camk2n1 (ENSOJAG00000011350)	ddx19b (ENSOJAG00000011382) #21	ENSOJAG00000011559	PUSL1 (ENSOJAG00000011587)	acap3b (ENSOJAG00000011727)	ube2j2 (ENSOJAG00000013879)	ADORA1 (ENSOJAG00000013961)	ENSOJAG00000013968	ccdc3b (ENSOJAG00000013973)	CAMK1 (ENSOJAG00000014013)	ENSOJAG00000014280	spcs1 (ENSOJAG00000014391)	nek4 (ENSOJAG00000014406)	sort1a (ENSOJAG00000014426)	psma5 (ENSOJAG00000014989)	mxra8a (ENSOJAG00000015021)	ENSOJAG00000015037
Oryzias_a	ANCESTRAL SPECIES	5	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Japanese Medaka HdrR	MODERN SPECIES	19	ccdc3b (ENSORLG00000016046)	ENSORLG00000022900	ADORA1 (ENSORLG00000016055)	cpne5b (ENSORLG00000016068)	KIF21B (ENSORLG00000016093)	srpk1b (ENSORLG00000016119)	LHFPL5 (ENSORLG00000022304)	ENSORLG00000016122	tmem167b (ENSORLG00000025009)	ENSORLG00000027906	ENSORLG00000016147	cdab (ENSORLG00000027661)	ENSORLG00000016170	ENSORLG00000016184	camk2n1 (ENSORLG00000027774)	ddx19b (ENSORLG00000016216) #21	ENSORLG00000026307	PUSL1 (ENSORLG00000016228)	acap3b (ENSORLG00000016285)	ube2j2 (ENSORLG00000016301)	ENSORLG00000025730	ENSORLG00000023126	ENSORLG00000021915	ENSORLG00000016313	ENSORLG00000016337	ENSORLG00000025982	ENSORLG00000016353	PHF13 (ENSORLG00000016362)	slc48a1b (ENSORLG00000016368)	ENSORLG00000016373	ENSORLG00000016388
Chinese medaka	MODERN SPECIES	12	ADORA1 (ENSOSIG00000010916)	ENSOSIG00000010917	cpne5b (ENSOSIG00000010921)	KIF21B (ENSOSIG00000011201)	LHFPL5 (ENSOSIG00000016226)	srpk1b (ENSOSIG00000016233)	ENSOSIG00000016523	tmem167b (ENSOSIG00000017597)	ENSOSIG00000017600	b3galt6 (ENSOSIG00000017602)	DNAJC16 (ENSOSIG00000017623)	cdab (ENSOSIG00000018000)	ENSOSIG00000018004	ENSOSIG00000018006	camk2n1 (ENSOSIG00000018009)	ddx19b (ENSOSIG00000018047) #21	ENSOSIG00000018462	PUSL1 (ENSOSIG00000018463)	acap3b (ENSOSIG00000018544)	ube2j2 (ENSOSIG00000019335)	HIPK1 (ENSOSIG00000019361)	ENSOSIG00000019421	DNAJC11 (ENSOSIG00000019447)	PHF13 (ENSOSIG00000019511)	slc48a1b (ENSOSIG00000019513)	ENSOSIG00000019519	ENSOSIG00000019525	vdrb (ENSOSIG00000019545)	ENSOSIG00000019633	eif4bb (ENSOSIG00000019771)	krt18b (ENSOSIG00000019775)
Ovalentaria_B	ANCESTRAL SPECIES	5	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Pomacentridae	ANCESTRAL SPECIES	3	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b	ENSGT00940000163961.a.b
Pomacentridae_A	ANCESTRAL SPECIES	2	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b	ENSGT00940000163961.a.b	ENSGT00940000161090.B.c.a.b
Amphiprion	ANCESTRAL SPECIES	11	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b	ENSGT00940000163961.a.b	ENSGT00940000161090.B.c.a.b
Clown anemonefish	MODERN SPECIES	3290					srpk1b (ENSAOCG00000019057)	ENSAOCG00000019098	tmem167b (ENSAOCG00000019120)	ENSAOCG00000019210	b3galt6 (ENSAOCG00000019220)	DNAJC16 (ENSAOCG00000019254)	cdab (ENSAOCG00000019261)	ENSAOCG00000019284	ENSAOCG00000001388	camk2n1 (ENSAOCG00000001393)	ENSAOCG00000019318	ddx19b (ENSAOCG00000019375) #21	PUSL1 (ENSAOCG00000019419)	acap3b (ENSAOCG00000019473)	ube2j2 (ENSAOCG00000019487)
Orange clownfish	MODERN SPECIES	20	ADORA1 (ENSAPEG00000006116)	cpne5b (ENSAPEG00000006049)	KIF21B (ENSAPEG00000005945)	LHFPL5 (ENSAPEG00000005891)	srpk1b (ENSAPEG00000005849)	MAPK14 (ENSAPEG00000005804)	tmem167b (ENSAPEG00000005767)	ENSAPEG00000005717	b3galt6 (ENSAPEG00000005700)	DNAJC16 (ENSAPEG00000005662)	cdab (ENSAPEG00000005654)	ENSAPEG00000005612	ENSAPEG00000005577	camk2n1 (ENSAPEG00000005550)	ENSAPEG00000005533	ddx19b (ENSAPEG00000005489) #21	PUSL1 (ENSAPEG00000005452)	acap3b (ENSAPEG00000005354)	ube2j2 (ENSAPEG00000005340)	HIPK1 (ENSAPEG00000005291)	ENSAPEG00000005184	DNAJC11 (ENSAPEG00000005093)	PHF13 (ENSAPEG00000005075)	slc48a1b (ENSAPEG00000005056)	ENSAPEG00000004943	ENSAPEG00000004885	vdrb (ENSAPEG00000004846)	ENSAPEG00000004756	eif4bb (ENSAPEG00000004732)	krt18b (ENSAPEG00000004716)	ENSAPEG00000004672
Spiny chromis	MODERN SPECIES	447			ENSAPOG00000016632	LHFPL5 (ENSAPOG00000016618)	srpk1b (ENSAPOG00000016601)	mapk14b (ENSAPOG00000016559)	tmem167b (ENSAPOG00000016500)	ENSAPOG00000016480	b3galt6 (ENSAPOG00000016464)	DNAJC16 (ENSAPOG00000016441)	cdab (ENSAPOG00000016416)	ENSAPOG00000016410	ENSAPOG00000016348	camk2n1 (ENSAPOG00000016339)	ENSAPOG00000016330	ddx19b (ENSAPOG00000016313) #21	PUSL1 (ENSAPOG00000016290)	acap3b (ENSAPOG00000016238)	ube2j2 (ENSAPOG00000016144)	HIPK1 (ENSAPOG00000016110)	ENSAPOG00000016077	DNAJC11 (ENSAPOG00000016022)	PHF13 (ENSAPOG00000015950)	SLC48A1 (ENSAPOG00000015944)	ENSAPOG00000015924	HDAC7 (ENSAPOG00000015865)
Bicolor damselfish	MODERN SPECIES	364								ENSSPAG00000002045	b3galt6 (ENSSPAG00000002060)	DNAJC16 (ENSSPAG00000002067)	cdab (ENSSPAG00000002085)	ENSSPAG00000002118	ENSSPAG00000002171	camk2n1 (ENSSPAG00000002417)	ENSSPAG00000002434	ddx19b (ENSSPAG00000002460) #21	ENSSPAG00000002507	PUSL1 (ENSSPAG00000002528)	acap3b (ENSSPAG00000002595)	ube2j2 (ENSSPAG00000002650)	ENSSPAG00000002679	HIPK1 (ENSSPAG00000002694)	ENSSPAG00000002763	DNAJC11 (ENSSPAG00000002782)	PHF13 (ENSSPAG00000002853)	slc48a1b (ENSSPAG00000002864)	ENSSPAG00000002881	HDAC7 (ENSSPAG00000002927)	vdrb (ENSSPAG00000003016)	ENSSPAG00000003055	eif4bb (ENSSPAG00000003105)
Cichlidae	ANCESTRAL SPECIES	1	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	4	ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	2	ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000180777	ENSGT00940000163886.B.b.b
Haplochromini	ANCESTRAL SPECIES	1	ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT01030000234959.C	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000180777
Burton s mouthbrooder	MODERN SPECIES	294	glt8d1 (ENSHBUG00000001344)	gnl3 (ENSHBUG00000001340)	ENSHBUG00000001336	ADORA1 (ENSHBUG00000001334)	cpne5b (ENSHBUG00000001327)	KIF21B (ENSHBUG00000001313)	LHFPL5 (ENSHBUG00000001304)	srpk1b (ENSHBUG00000001302)	MAPK14 (ENSHBUG00000001295)	tmem167b (ENSHBUG00000001289)	b3galt6 (ENSHBUG00000001286)	DNAJC16 (ENSHBUG00000001284)	ENSHBUG00000001278	ENSHBUG00000001274	camk2n1 (ENSHBUG00000001270)	ddx19b (ENSHBUG00000001269) #21	ENSHBUG00000001267	PUSL1 (ENSHBUG00000001264)	acap3b (ENSHBUG00000001261)	ube2j2 (ENSHBUG00000001257)	ENSHBUG00000001253	HIPK1 (ENSHBUG00000001251)	ENSHBUG00000001249	DNAJC11 (ENSHBUG00000001247)	PHF13 (ENSHBUG00000001246)	ENSHBUG00000023796	slc48a1b (ENSHBUG00000023783)	ENSHBUG00000000720	ENSHBUG00000023584	vdrb (ENSHBUG00000023547)	ENSHBUG00000023510
Haplochromini_A	ANCESTRAL SPECIES		ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT01030000234959.C	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b
P. nyererei	MODERN SPECIES	337			cpne5b (ENSPNYG00000008353)	KIF21B (ENSPNYG00000008281)	LHFPL5 (ENSPNYG00000008268)	srpk1b (ENSPNYG00000008236)	MAPK14 (ENSPNYG00000008186)	tmem167b (ENSPNYG00000008153)	b3galt6 (ENSPNYG00000008144)	DNAJC16 (ENSPNYG00000008129)	cdab (ENSPNYG00000008101)	ENSPNYG00000007611	ENSPNYG00000006793	camk2n1 (ENSPNYG00000006650)	ENSPNYG00000006637	ddx19b (ENSPNYG00000006610) #21	PUSL1 (ENSPNYG00000006588)	acap3b (ENSPNYG00000006524)	ube2j2 (ENSPNYG00000006496)	HIPK1 (ENSPNYG00000006455)	ENSPNYG00000006407	DNAJC11 (ENSPNYG00000006354)	PHF13 (ENSPNYG00000006344)	ENSPNYG00000006331	slc48a1b (ENSPNYG00000006317)	ENSPNYG00000006251	ENSPNYG00000006215	vdrb (ENSPNYG00000006182)	ENSPNYG00000006141	eif4bb (ENSPNYG00000006114)	krt18b (ENSPNYG00000006100)
Haplochromini_B	ANCESTRAL SPECIES		ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b
Zebra mbuna	MODERN SPECIES	1108	ENSMZEG00005000184	VAMP3 (ENSMZEG00005000145)	ENSMZEG00005000090	LHFPL5 (ENSMZEG00005000078)	srpk1b (ENSMZEG00005000055)	MAPK14 (ENSMZEG00005027001)	ENSMZEG00005027000	tmem167b (ENSMZEG00005026999)	b3galt6 (ENSMZEG00005026998)	DNAJC16 (ENSMZEG00005026997)	cdab (ENSMZEG00005026996)	ENSMZEG00005026995	ENSMZEG00005026994	camk2n1 (ENSMZEG00005026993)	ENSMZEG00005026992	ddx19b (ENSMZEG00005026991) #21	PUSL1 (ENSMZEG00005026990)	acap3b (ENSMZEG00005026989)	ube2j2 (ENSMZEG00005026988)	ENSMZEG00005026987	HIPK1 (ENSMZEG00005026986)	ENSMZEG00005026985	ENSMZEG00005026984	DNAJC11 (ENSMZEG00005026983)	PHF13 (ENSMZEG00005026982)	slc48a1b (ENSMZEG00005026981)	ENSMZEG00005026980	ENSMZEG00005026979	vdrb (ENSMZEG00005026978)	ENSMZEG00005026976	eif4bb (ENSMZEG00005026975)
Eastern happy	MODERN SPECIES	17	ENSACLG00000007425	ADORA1 (ENSACLG00000007432)	cpne5b (ENSACLG00000007450)	KIF21B (ENSACLG00000007488)	LHFPL5 (ENSACLG00000007629)	srpk1b (ENSACLG00000007639)	MAPK14 (ENSACLG00000007704)	tmem167b (ENSACLG00000007760)	ENSACLG00000007769	b3galt6 (ENSACLG00000007771)	DNAJC16 (ENSACLG00000007778)	cdab (ENSACLG00000008576)	ENSACLG00000008595	ENSACLG00000008608	camk2n1 (ENSACLG00000008614)	ddx19b (ENSACLG00000008632) #21	ENSACLG00000008667	PUSL1 (ENSACLG00000008675)	acap3b (ENSACLG00000008685)	ube2j2 (ENSACLG00000008713)	HIPK1 (ENSACLG00000008727)	ENSACLG00000008787	DNAJC11 (ENSACLG00000008851)	PHF13 (ENSACLG00000008894)	ENSACLG00000008901	ENSACLG00000008904	slc48a1b (ENSACLG00000008909)	ENSACLG00000008914	ENSACLG00000008922	vdrb (ENSACLG00000008953)	ENSACLG00000008981
Lyretail cichlid	MODERN SPECIES	296	gnl3 (ENSNBRG00000013161)	ENSNBRG00000013246	ADORA1 (ENSNBRG00000013258)	cpne5b (ENSNBRG00000013277)	KIF21B (ENSNBRG00000013339)	LHFPL5 (ENSNBRG00000013532)	srpk1b (ENSNBRG00000013549)	MAPK14 (ENSNBRG00000013617)	tmem167b (ENSNBRG00000013654)	b3galt6 (ENSNBRG00000013663)	DNAJC16 (ENSNBRG00000013669)	cdab (ENSNBRG00000013678)	ENSNBRG00000013704	ENSNBRG00000013880	camk2n1 (ENSNBRG00000014716)	ddx19b (ENSNBRG00000014735) #21	ENSNBRG00000014757	PUSL1 (ENSNBRG00000014762)	acap3b (ENSNBRG00000014797)	ube2j2 (ENSNBRG00000014856)	im:7152348 (ENSNBRG00000014879)	HIPK1 (ENSNBRG00000014900)	ENSNBRG00000014959	DNAJC11 (ENSNBRG00000015019)	PHF13 (ENSNBRG00000015059)	slc48a1b (ENSNBRG00000015064)	ENSNBRG00000015083	ENSNBRG00000015166	vdrb (ENSNBRG00000015262)	ENSNBRG00000015279	ENSNBRG00000015286
Nile tilapia	MODERN SPECIES	17	ENSONIG00000019339	ENSONIG00000040241	ADORA1 (ENSONIG00000031348)	cpne5b (ENSONIG00000019343)	KIF21B (ENSONIG00000019345)	LHFPL5 (ENSONIG00000027222)	srpk1b (ENSONIG00000019349)	MAPK14 (ENSONIG00000019351)	tmem167b (ENSONIG00000030784)	ENSONIG00000039694	b3galt6 (ENSONIG00000021176)	DNAJC16 (ENSONIG00000019355)	cdab (ENSONIG00000019357)	ENSONIG00000019358	camk2n1 (ENSONIG00000019359)	ddx19b (ENSONIG00000019360) #21	ENSONIG00000036288	pusl1 (ENSONIG00000019361)	acap3b (ENSONIG00000019362)	ube2j2 (ENSONIG00000019365)	ENSONIG00000038646	HIPK1 (ENSONIG00000019367)	ENSONIG00000019368	ENSONIG00000029268	DNAJC11 (ENSONIG00000019372)	PHF13 (ENSONIG00000019374)	slc48a1b (ENSONIG00000019375)	ENSONIG00000021177	vdrb (ENSONIG00000019378)	ENSONIG00000019379	eif4bb (ENSONIG00000019380)
Midas cichlid	MODERN SPECIES	826	ENSACIG00000013772	cpne5b (ENSACIG00000013782)	KIF21B (ENSACIG00000013821)	LHFPL5 (ENSACIG00000013873)	srpk1b (ENSACIG00000013885)	MAPK14 (ENSACIG00000013956)	tmem167b (ENSACIG00000013991)	ENSACIG00000014002	b3galt6 (ENSACIG00000014017)	DNAJC16 (ENSACIG00000014037)	ENSACIG00000014231	cdab (ENSACIG00000014687)	ENSACIG00000014722	camk2n1 (ENSACIG00000014750)	ENSACIG00000014757	ddx19b (ENSACIG00000014804) #21	PUSL1 (ENSACIG00000015240)	ENSACIG00000015278	acap3b (ENSACIG00000015283)	ube2j2 (ENSACIG00000015322)	HIPK1 (ENSACIG00000015340)	ENSACIG00000015375	DNAJC11 (ENSACIG00000015395)	PHF13 (ENSACIG00000015430)	slc48a1b (ENSACIG00000015451)	ENSACIG00000015491	ENSACIG00000015534	vdrb (ENSACIG00000015550)	ENSACIG00000015575	ENSACIG00000015614	eif4bb (ENSACIG00000015658)
Percomorphaceae_C	ANCESTRAL SPECIES	1	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000237351	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Eupercaria	ANCESTRAL SPECIES		ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Eupecaria_A	ANCESTRAL SPECIES		ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	2946																ddx19b (ENSLBEG00000000341) #21
Ballan wrasse	MODERN SPECIES	66	MAPKAPK2 (ENSLBEG00000012856)	ENSLBEG00000012892	il10 (ENSLBEG00000012906)	ENSLBEG00000012951	il19l (ENSLBEG00000013083)	PRELP (ENSLBEG00000013146)	zgc:113307 (ENSLBEG00000013168)	ENSLBEG00000013207	ENSLBEG00000013234	b3galt6 (ENSLBEG00000013247)	DNAJC16 (ENSLBEG00000013269)	cdab (ENSLBEG00000013305)	ENSLBEG00000013333	ENSLBEG00000013355	camk2n1 (ENSLBEG00000013372)	ddx19b (ENSLBEG00000013395) #21	PUSL1 (ENSLBEG00000013469)	acap3b (ENSLBEG00000013586)	ube2j2 (ENSLBEG00000013751)	ENSLBEG00000013778	HIPK1 (ENSLBEG00000013807)	ENSLBEG00000013861	ENSLBEG00000013892
Eupecaria_B	ANCESTRAL SPECIES	2	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Perciformes	ANCESTRAL SPECIES		ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b
Cottioidei	ANCESTRAL SPECIES		ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00390000018096	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000155325.a.b.a	ENSGT00940000162196	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b	ENSGT00940000163961.a.b
Stickleback	MODERN SPECIES	17	tas1r3 (ENSGACG00000007555)	errfi1a (ENSGACG00000007583)	cpne5b (ENSGACG00000007585)	ENSGACG00000007607	KIF21B (ENSGACG00000007609)	LHFPL5 (ENSGACG00000007658)	srpk1b (ENSGACG00000007667)	MAPK14 (ENSGACG00000007676)	ENSGACG00000007713	b3galt6 (ENSGACG00000007716)	DNAJC16 (ENSGACG00000007720)	cdab (ENSGACG00000007730)	ENSGACG00000007751	ENSGACG00000007768	camk2n1 (ENSGACG00000007772)	ddx19b (ENSGACG00000007778) #21	PUSL1 (ENSGACG00000007848)	acap3b (ENSGACG00000007862)	ube2j2 (ENSGACG00000007882)	HIPK1 (ENSGACG00000007904)	ENSGACG00000007914	DNAJC11 (ENSGACG00000007927)	PHF13 (ENSGACG00000007946)	slc48a1b (ENSGACG00000007949)	ENSGACG00000007963	ENSGACG00000007965	vdrb (ENSGACG00000007975)	ENSGACG00000007995	eif4bb (ENSGACG00000008010)	krt18b (ENSGACG00000008033)	ENSGACG00000008085
Lumpfish	MODERN SPECIES	20	zgc:162344 (ENSCLMG00005007231)	tpgs2 (ENSCLMG00005007233)	aqp7 (ENSCLMG00005007235)	zgc:64106 (ENSCLMG00005007236)	NOP56 (ENSCLMG00005007237)	nop56 (ENSCLMG00005007287)	ubap2a (ENSCLMG00005002893)	dcaf12 (ENSCLMG00005002960)	ubap1 (ENSCLMG00005002995)	b3galt6 (ENSCLMG00005003003)	DNAJC16 (ENSCLMG00005003022)	cdab (ENSCLMG00005003203)	ENSCLMG00005003210	camk2n1 (ENSCLMG00005003213)	ENSCLMG00005003214	ddx19b (ENSCLMG00005003229) #21	ENSCLMG00005003301	PUSL1 (ENSCLMG00005003302)	acap3b (ENSCLMG00005003318)	ube2j2 (ENSCLMG00005006379)	HIPK1 (ENSCLMG00005006383)	ENSCLMG00005006403	ENSCLMG00005006404	ENSCLMG00005006405	DNAJC11 (ENSCLMG00005006499)	PHF13 (ENSCLMG00005006501)	tmem167b (ENSCLMG00005006505)	mapk14b (ENSCLMG00005006513)	srpk1b (ENSCLMG00005006795)	LHFPL5 (ENSCLMG00005008536)	KIF21B (ENSCLMG00005008541)
Perciformes_a	ANCESTRAL SPECIES	5	ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b
Channel bull blenny	MODERN SPECIES	19	ADORA1 (ENSCGOG00000006496)	ENSCGOG00000006495	cpne5b (ENSCGOG00000006383)	KIF21B (ENSCGOG00000004827)	LHFPL5 (ENSCGOG00000004788)	srpk1b (ENSCGOG00000004632)	MAPK14 (ENSCGOG00000002573)	tmem167b (ENSCGOG00000002525)	b3galt6 (ENSCGOG00000002523)	DNAJC16 (ENSCGOG00000002241)	cdab (ENSCGOG00000002198)	ENSCGOG00000002010	ENSCGOG00000001998	camk2n1 (ENSCGOG00000001994)	ENSCGOG00000001993	ddx19b (ENSCGOG00000001386) #21	PUSL1 (ENSCGOG00000001337)	acap3b (ENSCGOG00000000892)	ube2j2 (ENSCGOG00000000832)	ENSCGOG00000000831	HIPK1 (ENSCGOG00000000392)	ENSCGOG00000000278	DNAJC11 (ENSCGOG00000000253)	PHF13 (ENSCGOG00000000247)	slc48a1b (ENSCGOG00000000243)	ENSCGOG00000000212	vdrb (ENSCGOG00000000153)	ENSCGOG00000000104	ENSCGOG00000013447	eif4bb (ENSCGOG00000013432)	krt18b (ENSCGOG00000013427)
Pike perch	MODERN SPECIES	11	gnl3 (ENSSLUG00000013454)	ENSSLUG00000013469	ADORA1 (ENSSLUG00000013472)	cpne5b (ENSSLUG00000013499)	KIF21B (ENSSLUG00000013640)	LHFPL5 (ENSSLUG00000015095)	srpk1b (ENSSLUG00000015131)	MAPK14 (ENSSLUG00000015633)	tmem167b (ENSSLUG00000016555)	b3galt6 (ENSSLUG00000016561)	DNAJC16 (ENSSLUG00000016590)	cdab (ENSSLUG00000016657)	ENSSLUG00000016664	ENSSLUG00000016698	camk2n1 (ENSSLUG00000016704)	ddx19b (ENSSLUG00000016739) #21	ENSSLUG00000017495	PUSL1 (ENSSLUG00000017521)	acap3b (ENSSLUG00000017596)	ube2j2 (ENSSLUG00000017874)	ENSSLUG00000017880	ENSSLUG00000017888	ENSSLUG00000000196	HIPK1 (ENSSLUG00000000313)	ENSSLUG00000000516	DNAJC11 (ENSSLUG00000000538)	ENSSLUG00000000543	slc48a1b (ENSSLUG00000000546)	ENSSLUG00000000551	ENSSLUG00000000563	vdrb (ENSSLUG00000000609)
Eupecaria_C	ANCESTRAL SPECIES		ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES		ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b
European seabass	MODERN SPECIES	10	ENSDLAG00005018866	cpne5b (ENSDLAG00005018009)	ENSDLAG00005012491	ENSDLAG00005033954	SRPK1B (ENSDLAG00005012148)	MAPK14A (ENSDLAG00005011756)	tmem167b (ENSDLAG00005030457)	ENSDLAG00005032396	B3GALT6 (ENSDLAG00005031283)	ENSDLAG00005011557	cdab (ENSDLAG00005011548)	ENSDLAG00005011535	ENSDLAG00005011526	CAMK2N2 (ENSDLAG00005032701)	ENSDLAG00005033301	DDX19B (ENSDLAG00005017452) #21	ENSDLAG00005011505	acap3b (ENSDLAG00005007900)	ENSDLAG00005006902	ENSDLAG00005006872	ENSDLAG00005006775	PHF13 (ENSDLAG00005034326)	slc48a1b (ENSDLAG00005006768)	TWIST3 (ENSDLAG00005032820)	ENSDLAG00005006690	ENSDLAG00005030808	vdrb (ENSDLAG00005027085)	ENSDLAG00005006150	eif4bb (ENSDLAG00005006084)	ENSDLAG00005006062	ENSDLAG00005005979
Large yellow croaker	MODERN SPECIES	478	ENSLCRG00005010343	ADORA1 (ENSLCRG00005010345)	cpne5b (ENSLCRG00005010373)	KIF21B (ENSLCRG00005001804)	ENSLCRG00005003489	srpk1b (ENSLCRG00005003499)	MAPK14 (ENSLCRG00005004242)	tmem167b (ENSLCRG00005004403)	ENSLCRG00005004405	b3galt6 (ENSLCRG00005004407)	DNAJC16 (ENSLCRG00005004410)	cdab (ENSLCRG00005004415)	ENSLCRG00005004416	ENSLCRG00005004420	camk2n1 (ENSLCRG00005004422)	ddx19b (ENSLCRG00005004450) #21	ENSLCRG00005005240	PUSL1 (ENSLCRG00005005241)	acap3b (ENSLCRG00005005248)	ube2j2 (ENSLCRG00005006565)	ENSLCRG00005006566	HIPK1 (ENSLCRG00005006568)	ENSLCRG00005006578	DNAJC11 (ENSLCRG00005006580)	PHF13 (ENSLCRG00005006586)	slc48a1b (ENSLCRG00005006589)	ENSLCRG00005006590	ENSLCRG00005006591	vdrb (ENSLCRG00005006595)	ENSLCRG00005006619	eif4bb (ENSLCRG00005007464)
Gilthead seabream	MODERN SPECIES	20	ENSSAUG00010013728	ADORA1 (ENSSAUG00010013730)	cpne5b (ENSSAUG00010013737)	KIF21B (ENSSAUG00010014188)	ENSSAUG00010015421	srpk1b (ENSSAUG00010015427)	ENSSAUG00010015500	tmem167b (ENSSAUG00010015777)	ENSSAUG00010015778	b3galt6 (ENSSAUG00010015784)	DNAJC16 (ENSSAUG00010015826)	cdab (ENSSAUG00010016904)	ENSSAUG00010016905	ENSSAUG00010016906	camk2n1 (ENSSAUG00010016907)	ddx19b (ENSSAUG00010016915) #21	ENSSAUG00010017570	PUSL1 (ENSSAUG00010017571)	acap3b (ENSSAUG00010017598)	ube2j2 (ENSSAUG00010019196)	ENSSAUG00010019198	HIPK1 (ENSSAUG00010019222)	ENSSAUG00010019626	ENSSAUG00010019628	DNAJC11 (ENSSAUG00010019633)	ENSSAUG00010019639	slc48a1b (ENSSAUG00010019641)	ENSSAUG00010019642	ENSSAUG00010019654	vdrb (ENSSAUG00010019658)	ENSSAUG00010019762
Tetraodontidae	ANCESTRAL SPECIES	1	ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.b	ENSGT00940000162196	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00940000155851.d	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b	ENSGT00940000163961.a.b	ENSGT00940000161090.B.c.a.b
Fugu	MODERN SPECIES	10	ADORA1 (ENSTRUG00000005994)	cpne5b (ENSTRUG00000006293)	KIF21B (ENSTRUG00000007464)	ENSTRUG00000008118	srpk1b (ENSTRUG00000008180)	MAPK14 (ENSTRUG00000008723)	tmem167b (ENSTRUG00000020157)	b3galt6 (ENSTRUG00000009286)	ENSTRUG00000009307	ENSTRUG00000009873	ENSTRUG00000032622	cdab (ENSTRUG00000024867)	ENSTRUG00000009919	camk2n1 (ENSTRUG00000026730)	ENSTRUG00000031243	ddx19b (ENSTRUG00000009474) #21	PUSL1 (ENSTRUG00000010102)	acap3b (ENSTRUG00000010173)	ube2j2 (ENSTRUG00000010675)	HIPK1 (ENSTRUG00000010772)	ENSTRUG00000030744	DNAJC11 (ENSTRUG00000011091)	PHF13 (ENSTRUG00000029969)	slc48a1b (ENSTRUG00000022927)	ENSTRUG00000011374	ENSTRUG00000011380	vdrb (ENSTRUG00000011576)	ENSTRUG00000011718	eif4bb (ENSTRUG00000019563)	krt18b (ENSTRUG00000011921)	ENSTRUG00000012155
Tetraodon	MODERN SPECIES	26	ENSTNIG00000005805	cpt2 (ENSTNIG00000010804)	dipk1c (ENSTNIG00000013516)	ENSTNIG00000005802	cyb5a (ENSTNIG00000005801)	fars2 (ENSTNIG00000005800)	ENSTNIG00000005799	ENSTNIG00000000975	ENSTNIG00000005796	ENSTNIG00000005795	ENSTNIG00000005794	cmtm7 (ENSTNIG00000000085)	zgc:153896 (ENSTNIG00000000376)	zeb2a (ENSTNIG00000005793)	ENSTNIG00000005792	ddx19b (ENSTNIG00000005790) #21	ENSTNIG00000005789	ENSTNIG00000005769	PHB2 (ENSTNIG00000005768)	ENSTNIG00000005767	ENSTNIG00000005763	kcnk5a (ENSTNIG00000000311)	ENSTNIG00000005762	ENSTNIG00000005758	SLC22A31 (ENSTNIG00000005757)	dpep1 (ENSTNIG00000005756)	sult5a1 (ENSTNIG00000005755)	ENSTNIG00000005754	ENSTNIG00000005753	dhodh (ENSTNIG00000005752)	ENSTNIG00000005751
Percomorphaceae_D	ANCESTRAL SPECIES	3	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b
Anabantaria	ANCESTRAL SPECIES		ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b	ENSGT00940000163961.a.b
Anabantoidei	ANCESTRAL SPECIES	1	ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000237351	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b	ENSGT00940000163961.a.b
Climbing perch	MODERN SPECIES	18	ENSATEG00000024238	cpne5b (ENSATEG00000024233)	ENSATEG00000024215	ENSATEG00000026492	srpk1b (ENSATEG00000024199)	ENSATEG00000024195	tmem167b (ENSATEG00000030152)	b3galt6 (ENSATEG00000024188)	ENSATEG00000024184	cdab (ENSATEG00000024173)	cdab (ENSATEG00000024180)	ENSATEG00000024169	ENSATEG00000024167	camk2n1 (ENSATEG00000024164)	ENSATEG00000026803	ddx19b (ENSATEG00000024160) #21	PUSL1 (ENSATEG00000024154)	acap3b (ENSATEG00000024143)	UBE2J2 (ENSATEG00000024138)	ENSATEG00000024137	ENSATEG00000024129	ENSATEG00000029677	ENSATEG00000024113	ENSATEG00000024108	slc48a1b (ENSATEG00000024104)	ENSATEG00000024098	ENSATEG00000024084	vdrb (ENSATEG00000024069)	ENSATEG00000024061	eif4bb (ENSATEG00000024049)	ENSATEG00000024043
Siamese fighting fish	MODERN SPECIES	16	gnl3 (ENSBSLG00000012933)	ENSBSLG00000012929	ADORA1 (ENSBSLG00000012920)	cpne5b (ENSBSLG00000011475)	KIF21B (ENSBSLG00000008157)	ENSBSLG00000008039	srpk1b (ENSBSLG00000007932)	MAPK14 (ENSBSLG00000007528)	tmem167b (ENSBSLG00000007516)	b3galt6 (ENSBSLG00000007512)	DNAJC16 (ENSBSLG00000007292)	ENSBSLG00000007222	ENSBSLG00000007216	camk2n1 (ENSBSLG00000007214)	ENSBSLG00000007208	ddx19b (ENSBSLG00000006675) #21	PUSL1 (ENSBSLG00000006039)	acap3b (ENSBSLG00000004188)	ube2j2 (ENSBSLG00000003599)	ENSBSLG00000003012	HIPK1 (ENSBSLG00000002650)	ENSBSLG00000002509	DNAJC11 (ENSBSLG00000002439)	ENSBSLG00000002385	slc48a1b (ENSBSLG00000002355)	ENSBSLG00000002331	HDAC7 (ENSBSLG00000002235)	vdrb (ENSBSLG00000002180)	ENSBSLG00000001520	eif4bb (ENSBSLG00000001467)	krt18b (ENSBSLG00000001459)
Zig-zag eel	MODERN SPECIES	19	ENSMAMG00000028498	ENSMAMG00000008927	cpne5b (ENSMAMG00000008949)	ENSMAMG00000008989	ENSMAMG00000009080	srpk1b (ENSMAMG00000009095)	ENSMAMG00000009135	tmem167b (ENSMAMG00000009193)	b3galt6 (ENSMAMG00000009214)	ENSMAMG00000027012	cdab (ENSMAMG00000009232)	ENSMAMG00000009290	ENSMAMG00000016516	camk2n1 (ENSMAMG00000016531)	ENSMAMG00000016566	ddx19b (ENSMAMG00000016547) #21	PUSL1 (ENSMAMG00000028473)	acap3b (ENSMAMG00000016589)	UBE2J2 (ENSMAMG00000028182)	ENSMAMG00000025803	ENSMAMG00000016666	ENSMAMG00000025406	ENSMAMG00000016737	ENSMAMG00000016765	slc48a1b (ENSMAMG00000027801)	ENSMAMG00000016787	ENSMAMG00000016811	vdrb (ENSMAMG00000016835)	ENSMAMG00000016854	eif4bb (ENSMAMG00000016889)	krt18b (ENSMAMG00000016897)
Carangaria	ANCESTRAL SPECIES	3	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.b.a	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b
Pleuronectoidei	ANCESTRAL SPECIES	4	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000176117	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.a.a.b	ENSGT00940000162196	ENSGT00390000011228.a.b	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01030000235016	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b.j	ENSGT00940000153336.a.b
Turbot	MODERN SPECIES	18	ENSSMAG00000006698	ENSSMAG00000035151	cpne5b (ENSSMAG00000006712)	ENSSMAG00000006816	ENSSMAG00000006924	srpk1b (ENSSMAG00000006937)	ENSSMAG00000006989	ENSSMAG00000007030	tmem167b (ENSSMAG00000007059)	ENSSMAG00000007066	ENSSMAG00000007071	cdab (ENSSMAG00000007092)	ENSSMAG00000007097	ENSSMAG00000007108	camk2n1 (ENSSMAG00000007116)	ddx19b (ENSSMAG00000007155) #21	ENSSMAG00000007181	ENSSMAG00000007347	PUSL1 (ENSSMAG00000007187)	acap3b (ENSSMAG00000007200)	UBE2J2 (ENSSMAG00000007238)	ENSSMAG00000007266	ENSSMAG00000029922	ENSSMAG00000007417	ENSSMAG00000007473	slc48a1b (ENSSMAG00000022408)	ENSSMAG00000007491	ENSSMAG00000007505	vdrb (ENSSMAG00000007590)	ENSSMAG00000007612	eif4bb (ENSSMAG00000007678)
Tongue sole	MODERN SPECIES	2	gnl3 (ENSCSEG00000005009)	ENSCSEG00000005019	ADORA1 (ENSCSEG00000005023)	cpne5b (ENSCSEG00000005029)	KIF21B (ENSCSEG00000005052)	LHFPL5 (ENSCSEG00000005083)	srpk1b (ENSCSEG00000005089)	mapk14b (ENSCSEG00000005124)	tmem167b (ENSCSEG00000005133)	ENSCSEG00000005135	b3galt6 (ENSCSEG00000005137)	DNAJC16 (ENSCSEG00000005138)	cdab (ENSCSEG00000005144)	ENSCSEG00000005145	camk2n1 (ENSCSEG00000005147)	ddx19b (ENSCSEG00000005149) #21	PUSL1 (ENSCSEG00000005159)	acap3b (ENSCSEG00000005163)	ube2j2 (ENSCSEG00000005170)	TAFA1 (ENSCSEG00000005174)	tafa4b (ENSCSEG00000005178)	EOGT (ENSCSEG00000005187)	tmf1 (ENSCSEG00000005196)	ENSCSEG00000005209	PRKCD (ENSCSEG00000005232)	SFMBT1 (ENSCSEG00000005248)	stimate (ENSCSEG00000005265)	mustn1b (ENSCSEG00000005275)	ITIH3 (ENSCSEG00000005279)	ENSCSEG00000005291	ITIH3 (ENSCSEG00000005339)
Carangaria_A	ANCESTRAL SPECIES	7	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.b.a	ENSGT00940000162196	ENSGT00940000178615	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000235016	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b	ENSGT00940000163961.a.b
Barramundi perch	MODERN SPECIES	71			KIF21B (ENSLCAG00010003744)	ENSLCAG00010003741	srpk1b (ENSLCAG00010003730)	mapk14b (ENSLCAG00010003698)	tmem167b (ENSLCAG00010003690)	ENSLCAG00010003689	b3galt6 (ENSLCAG00010003687)	DNAJC16 (ENSLCAG00010003671)	cdab (ENSLCAG00010003663)	ENSLCAG00010003660	ENSLCAG00010003657	camk2n1 (ENSLCAG00010003656)	ENSLCAG00010003654	ddx19b (ENSLCAG00010003592) #21	PUSL1 (ENSLCAG00010003582)	acap3b (ENSLCAG00010003387)	ube2j2 (ENSLCAG00010003328)	ENSLCAG00010003326	HIPK1 (ENSLCAG00010003303)	ENSLCAG00010003265	DNAJC11 (ENSLCAG00010003257)	PHF13 (ENSLCAG00010003251)	slc48a1b (ENSLCAG00010003247)	ENSLCAG00010003245	ENSLCAG00010003218	vdrb (ENSLCAG00010003182)	ENSLCAG00010003160	eif4bb (ENSLCAG00010003151)	krt18b (ENSLCAG00010003146)
Seriola	ANCESTRAL SPECIES	10	ENSGT00940000158320	ENSGT01100000263491.a.b.b.c.b	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000156194.m.b	ENSGT00940000159650	ENSGT00990000203541.a.a.b.h	ENSGT00940000155264	ENSGT00940000155325.a.b.a	ENSGT00940000162196	ENSGT00940000162229	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173	ENSGT00940000177111	ENSGT00940000155356.d.a	ENSGT00940000165359.a	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00390000002307.f.a	ENSGT00940000163428.a.a.a	ENSGT00940000159065.b	ENSGT00940000155473.c.b	ENSGT00940000163886.B.b.b	ENSGT00940000153336.a.b	ENSGT00940000163961.a.b
Yellowtail amberjack	MODERN SPECIES	3054	ENSSLDG00000008743	ENSSLDG00000008755	ADORA1 (ENSSLDG00000008763)	cpne5b (ENSSLDG00000008814)	KIF21B (ENSSLDG00000008928)	LHFPL5 (ENSSLDG00000009007)	srpk1b (ENSSLDG00000009069)	mapk14b (ENSSLDG00000009350)	tmem167b (ENSSLDG00000009414)	b3galt6 (ENSSLDG00000009442)	DNAJC16 (ENSSLDG00000009458)	cdab (ENSSLDG00000009489)	ENSSLDG00000009535	ENSSLDG00000009547	camk2n1 (ENSSLDG00000009570)	ddx19b (ENSSLDG00000009584) #21	PUSL1 (ENSSLDG00000009605)	acap3b (ENSSLDG00000009639)	ube2j2 (ENSSLDG00000009734)	HIPK1 (ENSSLDG00000009772)	ENSSLDG00000009836	ENSSLDG00000009848	DNAJC11 (ENSSLDG00000009863)	PHF13 (ENSSLDG00000009894)	slc48a1b (ENSSLDG00000009904)	HDAC7 (ENSSLDG00000009997)	vdrb (ENSSLDG00000010041)	ENSSLDG00000010103	eif4bb (ENSSLDG00000010210)	krt18b (ENSSLDG00000010237)	zgc:158846 (ENSSLDG00000010247)
Greater amberjack	MODERN SPECIES	37	gnl3 (ENSSDUG00000000972)	ENSSDUG00000000955	ADORA1 (ENSSDUG00000000936)	cpne5b (ENSSDUG00000000853)	KIF21B (ENSSDUG00000000731)	ENSSDUG00000000715	srpk1b (ENSSDUG00000000647)	mapk14b (ENSSDUG00000000557)	tmem167b (ENSSDUG00000000542)	b3galt6 (ENSSDUG00000000531)	DNAJC16 (ENSSDUG00000000522)	cdab (ENSSDUG00000000493)	ENSSDUG00000000450	ENSSDUG00000000393	camk2n1 (ENSSDUG00000000382)	ddx19b (ENSSDUG00000000334) #21	PUSL1 (ENSSDUG00000000287)	acap3b (ENSSDUG00000000189)	ube2j2 (ENSSDUG00000000145)	ENSSDUG00000000120	HIPK1 (ENSSDUG00000000082)	ENSSDUG00000023102	DNAJC11 (ENSSDUG00000023081)	PHF13 (ENSSDUG00000023079)	slc48a1b (ENSSDUG00000023077)	ENSSDUG00000023071	ENSSDUG00000023044	vdrb (ENSSDUG00000023031)	ENSSDUG00000023007	eif4bb (ENSSDUG00000022993)	krt18b (ENSSDUG00000022991)
Pinecone sodierfish	MODERN SPECIES	19	gnl3 (ENSMMDG00005003334)	ENSMMDG00005003342	ADORA1 (ENSMMDG00005003348)	cpne5b (ENSMMDG00005003370)	KIF21B (ENSMMDG00005003382)	LHFPL5 (ENSMMDG00005003393)	srpk1b (ENSMMDG00005003409)	mapk14b (ENSMMDG00005003522)	tmem167b (ENSMMDG00005003538)	b3galt6 (ENSMMDG00005003540)	DNAJC16 (ENSMMDG00005003577)	cdab (ENSMMDG00005004949)	ENSMMDG00005005073	ENSMMDG00005005080	camk2n1 (ENSMMDG00005005086)	ddx19b (ENSMMDG00005005136) #21	ENSMMDG00005006247	PUSL1 (ENSMMDG00005006253)	acap3b (ENSMMDG00005006259)	ube2j2 (ENSMMDG00005006269)	im:7152348 (ENSMMDG00005006277)	im:7152348 (ENSMMDG00005006278)	HIPK1 (ENSMMDG00005006289)	ENSMMDG00005006335	DNAJC11 (ENSMMDG00005006342)	ENSMMDG00005006362	slc48a1b (ENSMMDG00005006364)	ENSMMDG00005006367	HDAC7 (ENSMMDG00005006368)	vdrb (ENSMMDG00005006380)	ENSMMDG00005006422
Cod	MODERN SPECIES	4	ENSGMOG00000010797	ENSGMOG00000010764	ENSGMOG00000010730	bap1 (ENSGMOG00000010711)	ENSGMOG00000010674	cyb561d2 (ENSGMOG00000010667)	mapk14b (ENSGMOG00000004454)	ENSGMOG00000027727	b3galt6 (ENSGMOG00000004483)	ENSGMOG00000004489	cdab (ENSGMOG00000035841)	ENSGMOG00000037044	ENSGMOG00000019380	camk2n1 (ENSGMOG00000019383)	ENSGMOG00000032419	ddx19b (ENSGMOG00000019384) #21	PUSL1 (ENSGMOG00000019388)	acap3b (ENSGMOG00000019391)	UBE2J2 (ENSGMOG00000019396)	ENSGMOG00000019399	ENSGMOG00000036003	ENSGMOG00000019422	ENSGMOG00000030330	slc48a1b (ENSGMOG00000019437)	ENSGMOG00000035038	ENSGMOG00000026886	ENSGMOG00000029722	vdrb (ENSGMOG00000019451)	ENSGMOG00000032504	eif4bb (ENSGMOG00000019470)	acot8 (ENSGMOG00000014564)
Protacanthopterygii	ANCESTRAL SPECIES	6	ENSGT00390000001969.a.c	ENSGT00940000156496.a.b	ENSGT00940000157871.i	ENSGT00940000154169.B	ENSGT00940000156670	ENSGT00940000159698	ENSGT00940000155851.c.a	ENSGT00950000183195.a	ENSGT00390000001206	ENSGT00390000000911.h.a	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000154417.d #21	ENSGT01010000223025	ENSGT00940000158938.e	ENSGT00940000154417.c #21	ENSGT00990000208651	ENSGT00390000012939	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000156199.a.b	ENSGT00940000155356.c.a	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a.e	ENSGT00940000157665.a	ENSGT00940000158631
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	202	ENSGT00530000063735.a.b.d	ENSGT01100000263491.a.b.b.c.b.k.b	ENSGT01100000263491.a.b.b.c.b.k.a.b	ENSGT01030000234555.a.a.b.a.a.a.b.p	ENSGT00940000155264.h	ENSGT00990000203541.a.a.b.h.g.a	ENSGT00940000159650.e	ENSGT00940000156194.m.b.d	ENSGT00940000162229.e	ENSGT00940000162196.d.a.a	ENSGT00940000155325.a.b.a.c.a	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b.i	ENSGT01050000244971.A.d.a.a	ENSGT00390000004940.a.b.o.b	ENSGT00940000154417.d.g #21	ENSGT00490000043380.a.i	ENSGT00940000162174.d	ENSGT00940000154090.b.f.a	ENSGT00940000156134.p	ENSGT00390000002762.a.a.b.a.d	ENSGT00950000182883.b.a.b.a.g	ENSGT00940000155609.k.a.a	ENSGT00940000160065.g	ENSGT00940000160235.g.a	ENSGT00950000183208.A.d.a	ENSGT00950000182860.a.b.a.e	ENSGT00390000006305.m	ENSGT00390000003427.a.a	ENSGT00940000159439.b.a	ENSGT00940000161293.c
Huchen	MODERN SPECIES	110								ENSHHUG00000027576	b3galt6 (ENSHHUG00000027571)	tmem167b (ENSHHUG00000027563)	mapk14b (ENSHHUG00000027415)	DNAJC16 (ENSHHUG00000027392)	cdab (ENSHHUG00000027386)	ENSHHUG00000027382	camk2n1 (ENSHHUG00000027379)	ddx19b (ENSHHUG00000027189) #21	slc32a1 (ENSHHUG00000027177)	ENSHHUG00000027172	ENSHHUG00000027169	ENSHHUG00000027150	PPP1R16B (ENSHHUG00000027127)	fam210b (ENSHHUG00000027125)	shmt2 (ENSHHUG00000027121)	NXPH4 (ENSHHUG00000027120)	R3HDM2 (ENSHHUG00000026765)	ENSHHUG00000026754
Salmoninae_a	ANCESTRAL SPECIES	25	ENSGT01100000263491.a.b.b.c.b.k.a.b	ENSGT01030000234555.a.a.b.a.a.a.b.p	ENSGT00940000155264.h	ENSGT00990000203541.a.a.b.h.g.a	ENSGT00990000203541.a.a.b.h.h	ENSGT00940000159650.e	ENSGT00940000156194.m.b.d	ENSGT00940000162229.e	ENSGT00940000162196.d.a.a	ENSGT00940000155325.a.b.a.c.a	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b.i	ENSGT01050000244971.A.d.a.a	ENSGT01010000223025.b	ENSGT00390000004940.a.b.o.b	ENSGT00940000154417.d.g #21	ENSGT00490000043380.a.i	ENSGT00940000162174.d	ENSGT00940000154090.b.f.a	ENSGT00940000156134.p	ENSGT00390000002762.a.a.b.a.d	ENSGT00950000182883.b.a.b.a.g	ENSGT00940000155609.k.a.a	ENSGT00940000160065.g	ENSGT00940000160235.g.a	ENSGT00950000183208.A.d.a	ENSGT00950000182860.a.b.a.e	ENSGT00390000006305.m	ENSGT00390000003427.a.a	ENSGT00940000159439.b.a	ENSGT00940000161293.c
Salmo	ANCESTRAL SPECIES	6	ENSGT01100000263491.a.b.b.c.b.k.b.b	ENSGT01100000263491.a.b.b.c.b.k.a.b	ENSGT01030000234555.a.a.b.a.a.a.b.p	ENSGT00940000155264.h	ENSGT00990000203541.a.a.b.h.g.a	ENSGT00940000159650.e	ENSGT00940000156194.m.b.d	ENSGT00940000162229.e	ENSGT00940000162196.d.a.a	ENSGT00940000155325.a.b.a.c.a	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b.i	ENSGT01050000244971.A.d.a.a	ENSGT01010000223025.b	ENSGT00390000004940.a.b.o.b	ENSGT00940000154417.d.g #21	ENSGT00490000043380.a.i	ENSGT00940000162174.d	ENSGT00940000154090.b.f.a	ENSGT00940000156134.p	ENSGT00390000002762.a.a.b.a.d	ENSGT00950000182883.b.a.b.a.g	ENSGT00940000155609.k.a.a	ENSGT00940000160065.g	ENSGT00940000160235.g.a	ENSGT00950000183208.A.d.a	ENSGT00950000182860.a.b.a.e	ENSGT00390000006305.m	ENSGT00390000003427.a.a	ENSGT00940000159439.b.a	ENSGT00940000161293.c
River trout	MODERN SPECIES	7	ENSSTUG00000027454	ENSSTUG00000027458	ADORA1 (ENSSTUG00000027464)	srpk1b (ENSSTUG00000027474)	LHFPL5 (ENSSTUG00000027502)	KIF21B (ENSSTUG00000027554)	ENSSTUG00000028464	cpne5b (ENSSTUG00000028494)	b3galt6 (ENSSTUG00000029938)	tmem167b (ENSSTUG00000029947)	mapk14b (ENSSTUG00000029968)	DNAJC16 (ENSSTUG00000030079)	cdab (ENSSTUG00000030408)	ENSSTUG00000030414	camk2n1 (ENSSTUG00000030424)	ddx19b (ENSSTUG00000030430) #21	ENSSTUG00000030692	slc32a1 (ENSSTUG00000030703)	ENSSTUG00000030723	PPP1R16B (ENSSTUG00000030736)	ENSSTUG00000030798	ENSSTUG00000030803	NXPH4 (ENSSTUG00000030818)	R3HDM2 (ENSSTUG00000029974)	INHBC (ENSSTUG00000030462)	gli1 (ENSSTUG00000030470)	ENSSTUG00000030511	ARHGAP9 (ENSSTUG00000030522)	ddit3 (ENSSTUG00000030619)	dctn2 (ENSSTUG00000030644)	KIF5A (ENSSTUG00000030857)
Atlantic salmon	MODERN SPECIES	14	ARHGEF3 (ENSSSAG00000073898)	ENSSSAG00000110320	ENSSSAG00000087797	ENSSSAG00000088014	ENSSSAG00000118251	srpk1b (ENSSSAG00000073880)	ENSSSAG00000073877	ENSSSAG00000070231	cpne5b (ENSSSAG00000067456)	ENSSSAG00000105456	ENSSSAG00000067360	ENSSSAG00000066858	cdd (ENSSSAG00000066839)	ENSSSAG00000066837	ENSSSAG00000066832	ENSSSAG00000066715 #21	ENSSSAG00000100803	ENSSSAG00000066689	ENSSSAG00000094656	ppp1r16b (ENSSSAG00000066102)	fam210b (ENSSSAG00000066096)	shmt2 (ENSSSAG00000066094)	ENSSSAG00000082070	R3HDM2 (ENSSSAG00000064420)	INHBC (ENSSSAG00000090732)	gli1 (ENSSSAG00000064356)	ENSSSAG00000064348	RHG15 (ENSSSAG00000064319)	ENSSSAG00000109066	ENSSSAG00000122184	ENSSSAG00000093872
Oncorhynchus	ANCESTRAL SPECIES	5	ENSGT01100000263491.a.b.b.c.b.k.b	ENSGT01100000263491.a.b.b.c.b.k.a.b.a	ENSGT01030000234555.a.a.b.a.a.a.b.p	ENSGT00940000155264.h	ENSGT00990000203541.a.a.b.h.h	ENSGT00940000159650.e	ENSGT00940000156194.m.b.d	ENSGT00940000162229.e	ENSGT00940000162196.d.a.a	ENSGT00940000155325.a.b.a.c.a	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b.i	ENSGT01050000244971.A.d.a.a.a	ENSGT00390000004940.a.b.o.b	ENSGT01010000223025.b	ENSGT00940000154417.d.g #21	ENSGT00490000043380.a.i	ENSGT00940000162174.d	ENSGT00940000154090.b.f.a	ENSGT00940000156134.p	ENSGT01010000229889	ENSGT00950000182883.b.a.b.a.g	ENSGT00940000155609.k.a.a	ENSGT00940000160065.g	ENSGT00940000160235.g.a	ENSGT00950000183208.A.d.a	ENSGT00950000182860.a.b.a.e	ENSGT00390000006305.m	ENSGT00390000003427.a.a	ENSGT00940000159439.b.a	ENSGT00940000161293.c
Oncorhynchus_a	ANCESTRAL SPECIES	4	ENSGT00530000063735.a.b.d	ENSGT01100000263491.a.b.b.c.b.k.b	ENSGT01100000263491.a.b.b.c.b.k.a.b.a	ENSGT01030000234555.a.a.b.a.a.a.b.p	ENSGT00990000203541.a.a.b.h.h	ENSGT00940000159650.e	ENSGT00940000156194.m.b.d	ENSGT00940000162229.e	ENSGT00940000162196.d.a.a	ENSGT00940000155325.a.b.a.c.a	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b.i	ENSGT01050000244971.A.d.a.a.a	ENSGT00390000004940.a.b.o.b	ENSGT01010000223025.b	ENSGT00940000154417.d.g #21	ENSGT00490000043380.a.i	ENSGT00940000162174.d	ENSGT00940000154090.b.f.a	ENSGT00940000156134.p	ENSGT01010000229889	ENSGT00950000182883.b.a.b.a.g	ENSGT00940000155609.k.a.a	ENSGT00940000160065.g	ENSGT00940000160235.g.a	ENSGT00950000183208.A.d.a	ENSGT00950000182860.a.b.a.e	ENSGT00390000006305.m	ENSGT00390000003427.a.a	ENSGT00940000159439.b.a	ENSGT00940000161293.c
Chinook salmon	MODERN SPECIES	31	ENSOTSG00005035032	ENSOTSG00005035030	ADORA1 (ENSOTSG00005035029)	ENSOTSG00005035027	LHFPL5 (ENSOTSG00005035025)	KIF21B (ENSOTSG00005029760)	cpne5b (ENSOTSG00005029735)	b3galt6 (ENSOTSG00005029734)	tmem167b (ENSOTSG00005029733)	mapk14b (ENSOTSG00005029649)	DNAJC16 (ENSOTSG00005029528)	cdab (ENSOTSG00005029527)	ENSOTSG00005029525	camk2n1 (ENSOTSG00005029524)	ENSOTSG00005029522	ddx19b (ENSOTSG00005029464) #21	slc32a1 (ENSOTSG00005029457)	ARHGAP40 (ENSOTSG00005029456)	PPP1R16B (ENSOTSG00005029443)	ENSOTSG00005029440	NXPH4 (ENSOTSG00005029437)	R3HDM2 (ENSOTSG00005028531)	INHBC (ENSOTSG00005028520)	gli1 (ENSOTSG00005028515)	ENSOTSG00005028513	ARHGAP9 (ENSOTSG00005028424)	ddit3 (ENSOTSG00005028420)	dctn2 (ENSOTSG00005028365)	KIF5A (ENSOTSG00005028355)	sp7 (ENSOTSG00005028351)	ENSOTSG00005028350
Coho salmon	MODERN SPECIES	25	ENSOKIG00005002113	ENSOKIG00005002102	ADORA1 (ENSOKIG00005002089)	LHFPL5 (ENSOKIG00005002055)	KIF21B (ENSOKIG00005001114)	cpne5b (ENSOKIG00005000820)	b3galt6 (ENSOKIG00005000779)	tmem167b (ENSOKIG00005000769)	ENSOKIG00005000491	DNAJC16 (ENSOKIG00005000285)	cdab (ENSOKIG00005000248)	ENSOKIG00005000231	camk2n1 (ENSOKIG00005000210)	ENSOKIG00005000205	ENSOKIG00005000200	ddx19b (ENSOKIG00005000187) #21	SLC32A1 (ENSOKIG00005000179)	ENSOKIG00005000159	PPP1R16B (ENSOKIG00005000113)	ENSOKIG00005000056	ENSOKIG00005000043	NXPH4 (ENSOKIG00005000023)	ENSOKIG00005000010	R3HDM2 (ENSOKIG00005032208)	INHBC (ENSOKIG00005032179)	gli1 (ENSOKIG00005032090)	ENSOKIG00005032066	ARHGAP9 (ENSOKIG00005031927)	ddit3 (ENSOKIG00005031895)	dctn2 (ENSOKIG00005031094)	ENSOKIG00005031017
Rainbow trout	MODERN SPECIES	28	ENSOMYG00000027831	ENSOMYG00000061860	ENSOMYG00000027818	srpk1b (ENSOMYG00000027803)	ENSOMYG00000027794	ENSOMYG00000025535	cpne5b (ENSOMYG00000024711)	ENSOMYG00000024623	ENSOMYG00000024601	ENSOMYG00000024570	ENSOMYG00000023819	cdab (ENSOMYG00000023394)	ENSOMYG00000023376	camk2n1 (ENSOMYG00000023367)	ENSOMYG00000023352	ddx19b (ENSOMYG00000023284) #21	ENSOMYG00000069626	ENSOMYG00000023234	ENSOMYG00000023176	ENSOMYG00000022989	ENSOMYG00000022867	ENSOMYG00000022828	ENSOMYG00000022797	ENSOMYG00000051093	R3HDM2 (ENSOMYG00000021429)	INHBC (ENSOMYG00000021098)	gli1 (ENSOMYG00000021075)	ENSOMYG00000021048	ENSOMYG00000021038	ARHGAP9 (ENSOMYG00000021030)	ddit3 (ENSOMYG00000066053)
Salmoninae	ANCESTRAL SPECIES	101												ENSGT00940000155325.a.b.a.c.b	ENSGT00390000000911.h.b.j	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b.o.a	ENSGT00940000154417.d.h #21	ENSGT01010000223025	ENSGT00940000159809	ENSGT00950000182810.A.a.a.a	ENSGT00940000154900	ENSGT00490000043380.a.j	ENSGT00940000162174.c	ENSGT00940000154090.b.f.b	ENSGT00940000156134.o	ENSGT00940000161040.a	ENSGT00390000002762.a.a.b.a.c	ENSGT00950000182883.b.a.b.a.h	ENSGT00950000183092.a.d.a	ENSGT00940000155609.k.a.b	ENSGT00940000160065.h	ENSGT00940000160235.g.b
Huchen	MODERN SPECIES	4182											mapk14b (ENSHHUG00000039175)	cdab (ENSHHUG00000039181)	ENSHHUG00000039190	ENSHHUG00000039201	camk2n1 (ENSHHUG00000039254)	ddx19b (ENSHHUG00000039263) #21	ENSHHUG00000039686	prelid3b (ENSHHUG00000039698)	aurka (ENSHHUG00000039720)	slc32a1 (ENSHHUG00000039729)
Salmoninae_a	ANCESTRAL SPECIES	29	ENSGT00940000164807.G.a.b.e.b	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.b	ENSGT01100000263491.a.b.b.c.b.k.a.a.b.b.b	ENSGT01030000234555.a.a.b.a.a.a.b.o	ENSGT00940000155264.g	ENSGT00990000203541.a.a.b.h.g.b	ENSGT00940000159650.f	ENSGT00940000156194.m.b.c.b	ENSGT00940000169818	ENSGT00940000162229.f	ENSGT00940000162196.d.b	ENSGT00940000155325.a.b.a.c.b	ENSGT00390000000911.h.b.j	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b.o.a	ENSGT00940000154417.d.h #21	ENSGT01010000223025.a	ENSGT00950000182810.A.a.a.a	ENSGT00940000154900	ENSGT00490000043380.a.j	ENSGT00940000162174.c	ENSGT00940000154090.b.f.b	ENSGT00940000156134.o	ENSGT00940000161040.a	ENSGT00390000002762.a.a.b.a.c	ENSGT00950000182883.b.a.b.a.h	ENSGT00950000183092.a.d.a	ENSGT00940000155609.k.a.b	ENSGT00940000160065.h	ENSGT00940000160235.g.b	ENSGT00950000183208.A.d.b
Salmo	ANCESTRAL SPECIES	33	ENSGT00530000063735.a.b.c	ENSGT00390000012411	ENSGT00940000164807.G.a.b.e.b	ENSGT01100000263491.a.b.b.c.b.k.a.a.b.b.b	ENSGT01030000234555.a.a.b.a.a.a.b.o	ENSGT00940000155264.g	ENSGT00990000203541.a.a.b.h.g.b	ENSGT00940000159650.f	ENSGT00940000156194.m.b.c.a.b	ENSGT00970000193995.a.a	ENSGT00940000162229.f	ENSGT00940000162196.d.b	ENSGT00940000155325.a.b.a.c.b	ENSGT00390000000911.h.b.j	ENSGT01050000244971.B.a	ENSGT00940000154417.d.h #21	ENSGT01010000223025.a	ENSGT00950000182810.A.a.a.a	ENSGT00940000154900	ENSGT00490000043380.a.j	ENSGT00940000162174.c	ENSGT00940000154090.b.f.b	ENSGT00940000156134.o	ENSGT00940000161040.a	ENSGT00390000002762.a.a.b.a.c	ENSGT00950000182883.b.a.b.a.h	ENSGT00950000183092.a.d.a	ENSGT00940000155609.k.a.b	ENSGT00940000160065.h	ENSGT00940000160235.g.b	ENSGT00950000183208.A.d.b.a
River trout	MODERN SPECIES	5	ENSSTUG00000015563	ENSSTUG00000015559	ENSSTUG00000015544	ENSSTUG00000015541	ADORA1 (ENSSTUG00000015536)	srpk1b (ENSSTUG00000013555)	KIF21B (ENSSTUG00000010369)	cpne5b (ENSSTUG00000010141)	ENSSTUG00000010132	b3galt6 (ENSSTUG00000010115)	tmem167b (ENSSTUG00000010098)	mapk14b (ENSSTUG00000009991)	cdab (ENSSTUG00000009913)	ENSSTUG00000009909	ENSSTUG00000009899	ddx19b (ENSSTUG00000009179) #21	prelid3b (ENSSTUG00000009088)	aurka (ENSSTUG00000009070)	slc32a1 (ENSSTUG00000009050)	ARHGAP40 (ENSSTUG00000009023)	PPP1R16B (ENSSTUG00000008935)	fam210b (ENSSTUG00000008899)	ENSSTUG00000008885	shmt2 (ENSSTUG00000008201)	STAC3 (ENSSTUG00000008055)	R3HDM2 (ENSSTUG00000006166)	INHBC (ENSSTUG00000006022)	gli1 (ENSSTUG00000006004)	ENSSTUG00000005974	ARHGAP9 (ENSSTUG00000005929)	ENSSTUG00000005898
Atlantic salmon	MODERN SPECIES	3	ilrun (ENSSSAG00000091907)	ENSSSAG00000112867	ENSSSAG00000059592	srpk1b (ENSSSAG00000007612)	ENSSSAG00000009801	ENSSSAG00000009852	ENSSSAG00000082539	cpne5b (ENSSSAG00000088360)	ENSSSAG00000058444	ENSSSAG00000086731	ca119 (ENSSSAG00000107955)	ENSSSAG00000015707	ENSSSAG00000040745	ENSSSAG00000015735	ENSSSAG00000100028	ENSSSAG00000015787 #21	ENSSSAG00000031016	ENSSSAG00000090594	ENSSSAG00000031237	ENSSSAG00000092320	ENSSSAG00000094059	ENSSSAG00000031772	fam210b (ENSSSAG00000093027)	NDUFA4L2 (ENSSSAG00000120770)	GLYM (ENSSSAG00000040078)	NXPH4 (ENSSSAG00000045938)	STAC3 (ENSSSAG00000045942)	R3HDM2 (ENSSSAG00000045994)	INHBC (ENSSSAG00000104549)	gli1 (ENSSSAG00000046547)	ENSSSAG00000046521
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT00940000164807.G.a.b.e.b	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.b	ENSGT01100000263491.a.b.b.c.b.k.a.b.b	ENSGT01100000263491.a.b.b.c.b.k.a.a.b.b.b	ENSGT01030000234555.a.a.b.a.a.a.b.o	ENSGT00940000155264.g	ENSGT00940000159650.f	ENSGT00940000156194.m.b.c.b	ENSGT00940000169818	ENSGT00940000162229.f	ENSGT00940000162196.d.a.b	ENSGT00940000155325.a.b.a.c.b	ENSGT00390000000911.h.b.j	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b.o.a	ENSGT00940000154417.d.h #21	ENSGT01010000223025.a	ENSGT00950000182810.A.a.a.a	ENSGT00940000154900	ENSGT00490000043380.a.j	ENSGT00940000162174.c	ENSGT00940000154090.b.f.b	ENSGT00940000156134.o	ENSGT00940000161040.a	ENSGT00390000002762.a.a.b.a.c	ENSGT00950000182883.b.a.b.a.h	ENSGT00940000160065.h	ENSGT00940000155609.k.a.b	ENSGT00940000160235.g.b	ENSGT00950000183208.A.d.b	ENSGT00950000182860.a.b.a.f
Oncorhynchus_a	ANCESTRAL SPECIES	54	ENSGT00940000164807.G.a.b.e.b	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.b	ENSGT01100000263491.a.b.b.c.b.k.a.b.b	ENSGT00940000154308.A.a.b.a.a.b.a.a.b	ENSGT01100000263491.a.b.b.c.b.k.a.a.b.b.b	ENSGT01030000234555.a.a.b.a.a.a.b.o	ENSGT00940000155264.g	ENSGT00940000159650.f	ENSGT00970000193995.a.a	ENSGT00940000162229.f	ENSGT00940000162196.d.b	ENSGT00940000155325.a.b.a.c.b	ENSGT00390000000911.h.b.j	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b.o.a	ENSGT00940000154417.d.h #21	ENSGT01010000223025.a	ENSGT00950000182810.A.a.a.a	ENSGT00940000154900	ENSGT00490000043380.a.j	ENSGT00940000162174.c	ENSGT00940000154090.b.f.b	ENSGT00940000156134.o	ENSGT00940000161040.a	ENSGT00390000002762.a.a.b.a.c	ENSGT00950000182883.b.a.b.a.h	ENSGT00940000160065.h	ENSGT00940000155609.k.a.b	ENSGT00940000160235.g.b	ENSGT00950000183208.A.d.b	ENSGT00950000182860.a.b.a.f
Chinook salmon	MODERN SPECIES	11	CCDC66 (ENSOTSG00005004987)	ENSOTSG00005004995	ENSOTSG00005004996	ENSOTSG00005004997	ENSOTSG00005005000	ADORA1 (ENSOTSG00005005002)	ENSOTSG00005005011	ENSOTSG00005005017	b3galt6 (ENSOTSG00005005020)	tmem167b (ENSOTSG00005005021)	mapk14b (ENSOTSG00005005030)	ENSOTSG00005005084	ENSOTSG00005005085	ENSOTSG00005005086	camk2n1 (ENSOTSG00005005087)	ddx19b (ENSOTSG00005005106) #21	ENSOTSG00005007978	prelid3b (ENSOTSG00005007979)	aurka (ENSOTSG00005007980)	slc32a1 (ENSOTSG00005007982)	ENSOTSG00005007983	ENSOTSG00005000127	ENSOTSG00005000401	NDUFA4L2 (ENSOTSG00005000738)	shmt2 (ENSOTSG00005000876)	NXPH4 (ENSOTSG00005001081)	ENSOTSG00005001086	ENSOTSG00005001093	ENSOTSG00005001103	ENSOTSG00005001106	CELA1 (ENSOTSG00005001112)
Coho salmon	MODERN SPECIES		ENSOKIG00005029737	ENSOKIG00005029734	ADORA1 (ENSOKIG00005029728)	ENSOKIG00005029715	ENSOKIG00005028841	KIF21B (ENSOKIG00005028309)	ENSOKIG00005028254	ENSOKIG00005028208	B3GALT6 (ENSOKIG00005028195)	TMEM167B (ENSOKIG00005028190)	MAPK14 (ENSOKIG00005027854)	cdab (ENSOKIG00005027770)	ENSOKIG00005027746	camk2n1 (ENSOKIG00005027717)	ENSOKIG00005027683	ddx19b (ENSOKIG00005026862) #21	prelid3b (ENSOKIG00005026798)	aurka (ENSOKIG00005026781)	slc32a1 (ENSOKIG00005026758)	ARHGAP40 (ENSOKIG00005026743)	ENSOKIG00005026729	PPP1R16B (ENSOKIG00005026717)	fam210b (ENSOKIG00005026712)	NDUFA4L2 (ENSOKIG00005026708)	shmt2 (ENSOKIG00005026554)	NXPH4 (ENSOKIG00005026535)	ENSOKIG00005026530	ENSOKIG00005026523	R3HDM2 (ENSOKIG00005025940)	ENSOKIG00005025861	gli1 (ENSOKIG00005025774)
Rainbow trout	MODERN SPECIES	8	ENSOMYG00000009197	ENSOMYG00000009240	ENSOMYG00000009255	ENSOMYG00000057411	srpk1b (ENSOMYG00000057594)	ENSOMYG00000050571	ENSOMYG00000076305	cpne5b (ENSOMYG00000067919)	ENSOMYG00000009471	ENSOMYG00000061155	ENSOMYG00000009513	ENSOMYG00000009571	ENSOMYG00000052742	ENSOMYG00000009643	ENSOMYG00000072693	ddx19b (ENSOMYG00000009954) #21	ENSOMYG00000011277	ENSOMYG00000011297	ENSOMYG00000011329	ENSOMYG00000066952	ENSOMYG00000055935	fam210b (ENSOMYG00000011356)	NDUFA4L2 (ENSOMYG00000074259)	shmt2 (ENSOMYG00000011457)	NXPH4 (ENSOMYG00000013213)	ENSOMYG00000013220	ENSOMYG00000069248	ENSOMYG00000067800	ENSOMYG00000073355	GLI1 (ENSOMYG00000013255)	ENSOMYG00000013334
Northern pike	MODERN SPECIES	16	gli1 (ENSELUG00000010164)	INHBC (ENSELUG00000026593)	R3HDM2 (ENSELUG00000015969)	STAC3 (ENSELUG00000015859)	NXPH4 (ENSELUG00000019200)	shmt2 (ENSELUG00000019224)	NDUFA4L2 (ENSELUG00000019234)	fam210b (ENSELUG00000019248)	PPP1R16B (ENSELUG00000019307)	ENSELUG00000019348	slc32a1 (ENSELUG00000032744)	ENSELUG00000032646	aurka (ENSELUG00000019389)	ENSELUG00000034488	ENSELUG00000028856	ddx19b (ENSELUG00000000838) #21	camk2n1 (ENSELUG00000028844)	ENSELUG00000000847	st3gal8 (ENSELUG00000019486)	ENSELUG00000026051	ENSELUG00000028742	ENSELUG00000020441	cpne1 (ENSELUG00000020388)	nfs1 (ENSELUG00000020341)	rbm39a (ENSELUG00000020296)	si:ch211-15p9.2 (ENSELUG00000020263)	atp6ap1la (ENSELUG00000020246)	ENSELUG00000020212	rps23 (ENSELUG00000020180)	ASB14 (ENSELUG00000020155)	appl1 (ENSELUG00000020145)
Elephant shark	MODERN SPECIES	1578				ENSCMIG00000002138	ENSCMIG00000002143	RERE (ENSCMIG00000002174)	eno1a (ENSCMIG00000002298)	ENSCMIG00000002535	slc2a5 (ENSCMIG00000002578)	gpr157 (ENSCMIG00000002598)	H6PD (ENSCMIG00000002601)	spsb1 (ENSCMIG00000002606)	slc25a33 (ENSCMIG00000002613)	mul1b (ENSCMIG00000002625)	VWA5B1 (ENSCMIG00000002638)	ddx19b (ENSCMIG00000002690) #21	ENSCMIG00000002742	UBXN10 (ENSCMIG00000002749)	ACAP3 (ENSCMIG00000003049)	ENSCMIG00000003760	ENSCMIG00000003761	ENSCMIG00000003763	ints11 (ENSCMIG00000003796)	CPTP (ENSCMIG00000003928)	ENSCMIG00000003935	hes2.1 (ENSCMIG00000003939)	acot7 (ENSCMIG00000003946)	GPR153 (ENSCMIG00000003950)	MMEL1 (ENSCMIG00000003990)	ENSCMIG00000004038	ENSCMIG00000004040
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000154417 #21
Hagfish	MODERN SPECIES	367	cdc123 (ENSEBUG00000006430)	ENSEBUG00000014860	qrich1 (ENSEBUG00000010518)	ENSEBUG00000015889	ENSEBUG00000000539	cxxc1a (ENSEBUG00000009187)	ENSEBUG00000011617	gabarapa (ENSEBUG00000015205)	ccnl1a (ENSEBUG00000013214)	CHD3 (ENSEBUG00000008310)	cdk11b (ENSEBUG00000014440)	ENSEBUG00000009113	ENSEBUG00000016800	emg1 (ENSEBUG00000008287)	ENSEBUG00000007707	ddx19a (ENSEBUG00000001119) #21	ENSEBUG00000015498	ENSEBUG00000010165	gapdh (ENSEBUG00000006892)	ENSEBUG00000010741	ENSEBUG00000002976	ENSEBUG00000009530	ENSEBUG00000016877	ENSEBUG00000009189	ENSEBUG00000004716	ENSEBUG00000002397	rbp7b (ENSEBUG00000013450)	alpl (ENSEBUG00000007697)	mfn2 (ENSEBUG00000014863)	ENSEBUG00000005091	ENSEBUG00000013868