Mus_A	ANCESTRAL SPECIES	1	ENSGT00420000029858 #7	ENSGT00420000029847 #8	ENSGT00940000156370 #9	ENSGT00390000018876 #10	ENSGT00390000009456 #11	ENSGT00940000153837.a.b #12	ENSGT00390000007074 #13	ENSGT00940000162291 #14	ENSGT00940000160021 #15	ENSGT00940000156469 #16	ENSGT00940000162646 #17	ENSGT00940000160676 #18	ENSGT00940000153657.B #19	ENSGT00940000159100 #20	ENSGT00940000159496 #21	ENSGT00940000154415.`b #22	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b	ENSGT00390000003210 #23	ENSGT00390000000707 #24	ENSGT00940000158339 #25	ENSGT00550000074924 #26	ENSGT00940000160924 #27	ENSGT00390000009774.e.c #29	ENSGT00900000141269.i.a #30	ENSGT00900000141269.j.b.b ##30	ENSGT00390000009774.f.a.a ##28	ENSGT00940000161007	ENSGT00390000018560.a.b	ENSGT00940000159697	ENSGT00940000153062.A.a.a.a	ENSGT00940000162018
Mus_B	ANCESTRAL SPECIES		ENSGT00420000029858 #7	ENSGT00420000029847 #8	ENSGT00940000156370 #9	ENSGT00390000018876 #10	ENSGT00390000009456 #11	ENSGT00940000153837.a.b #12	ENSGT00390000007074 #13	ENSGT00940000162291 #14	ENSGT00940000160021 #15	ENSGT00940000156469 #16	ENSGT00940000162646 #17	ENSGT00940000160676 #18	ENSGT00940000153657.B #19	ENSGT00940000159100 #20	ENSGT00940000159496 #21	ENSGT00940000154415.`b #22	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b	ENSGT00390000003210 #23	ENSGT00390000000707 #24	ENSGT00940000158339 #25	ENSGT00550000074924 #26	ENSGT00940000160924 #27	ENSGT00390000009774.e.d #28	ENSGT00390000009774.e.c.b #29	ENSGT00900000141269.i.a #30	ENSGT00390000009774.e.c.a ##28	ENSGT00900000141269.i.b #31	ENSGT00390000009774.f.a.b #32	ENSGT00900000141269.j.a.a #33	ENSGT00390000009774.f.b.a.a ##28	ENSGT00900000141269.j.b.a ##30
Mouse	MODERN SPECIES	16	Nudt19 (ENSMUSG00000034875) #7	Tdrd12 (ENSMUSG00000030491) #8	Slc7a9 (ENSMUSG00000030492) #9	Cep89 (ENSMUSG00000023072) #10	Faap24 (ENSMUSG00000030493) #11	Rhpn2 (ENSMUSG00000030494) #12	Gpatch1 (ENSMUSG00000063808) #13	Wdr88 (ENSMUSG00000118454) #14	Lrp3 (ENSMUSG00000001802) #15	Slc7a10 (ENSMUSG00000030495) #16	Cebpa (ENSMUSG00000034957) #17	Cebpg (ENSMUSG00000056216) #18	Pepd (ENSMUSG00000063931) #19	Chst8 (ENSMUSG00000060402) #20	Kctd15 (ENSMUSG00000030499) #21	Lsm14a (ENSMUSG00000066568) #22	Garre1 (ENSMUSG00000066571) #23	Gpi1 (ENSMUSG00000036427) #24	Pdcd2l (ENSMUSG00000002635) #25	Uba2 (ENSMUSG00000052997) #26	Wtip (ENSMUSG00000036459) #27	Scgb1b30 (ENSMUSG00000078752) #28	Scgb1b27 (ENSMUSG00000066583) #29	Scgb2b27 (ENSMUSG00000066584) #30	Scgb2b26 (ENSMUSG00000066586) #31	Scgb1b24 (ENSMUSG00000078753) #32	Scgb2b24 (ENSMUSG00000046438) #33	Scgb2b21 (ENSMUSG00000099900) #34	Scgb1b20 (ENSMUSG00000094978) #35	Scgb2b20 (ENSMUSG00000094305) #36	Scgb1b19 (ENSMUSG00000095232) #37
Mus_C	ANCESTRAL SPECIES	32	ENSGT00420000029858 #7	ENSGT00420000029847 #8	ENSGT00940000156370 #9	ENSGT00390000018876 #10	ENSGT00390000009456 #11	ENSGT00940000153837.a.b #12	ENSGT00390000007074 #13	ENSGT00940000162291 #14	ENSGT00940000160021 #15	ENSGT00940000156469 #16	ENSGT00940000162646 #17	ENSGT00940000160676 #18	ENSGT00940000153657.B #19	ENSGT00940000159100 #20	ENSGT00940000159496 #21	ENSGT00940000154415.`b #22	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b	ENSGT00390000003210 #23	ENSGT00390000000707 #24	ENSGT00940000158339 #25	ENSGT00550000074924 #26	ENSGT00940000160924 #27	ENSGT00390000009774.e.d #28	ENSGT00390000009774.e.c.b #29	ENSGT00900000141269.i.a #30	ENSGT00390000009774.e.c.a ##28	ENSGT00900000141269.i.b #31	ENSGT00390000009774.f.a.b #32	ENSGT00900000141269.j.a.a #33	ENSGT00900000141269.j.a.b.b.b #34	ENSGT00390000009774.f.b.a.b #35
Steppe mouse	MODERN SPECIES	2649														Chst8 (ENSMSIG00000016709) #20	Kctd15 (ENSMSIG00000016721) #21	Lsm14a (ENSMSIG00000016741) #22	ENSMSIG00000016777	Garre1 (ENSMSIG00000016800) #23	Gpi1 (ENSMSIG00000016861) #24	Pdcd2l (ENSMSIG00000016935) #25	Uba2 (ENSMSIG00000016950) #26	ENSMSIG00000016986 #27	Scgb1b30 (ENSMSIG00000017061) #28
spretus	MODERN SPECIES	16	Ankrd27 (MGP_SPRETEiJ_G0030689)	Rgs9bp (MGP_SPRETEiJ_G0030688)	Tdrd12 (MGP_SPRETEiJ_G0030686) #8	Slc7a9 (MGP_SPRETEiJ_G0030685) #9	Cep89 (MGP_SPRETEiJ_G0030684) #10	Faap24 (MGP_SPRETEiJ_G0030683) #11	Rhpn2 (MGP_SPRETEiJ_G0030682) #12	Gpatch1 (MGP_SPRETEiJ_G0030681) #13	Lrp3 (MGP_SPRETEiJ_G0030680) #15	Slc7a10 (MGP_SPRETEiJ_G0030679) #16	Cebpa (MGP_SPRETEiJ_G0030678) #17	Cebpg (MGP_SPRETEiJ_G0030677) #18	Pepd (MGP_SPRETEiJ_G0030676) #19	Chst8 (MGP_SPRETEiJ_G0030675) #20	Kctd15 (MGP_SPRETEiJ_G0030674) #21	Lsm14a (MGP_SPRETEiJ_G0030673) #22	MGP_SPRETEiJ_G0030672	Garre1 (MGP_SPRETEiJ_G0030671) #23	Gpi1 (MGP_SPRETEiJ_G0030670) #24	Pdcd2l (MGP_SPRETEiJ_G0030669) #25	Uba2 (MGP_SPRETEiJ_G0030668) #26	Wtip (MGP_SPRETEiJ_G0030667) #27	Scgb1b27 (MGP_SPRETEiJ_G0030666) #29	Scgb2b27 (MGP_SPRETEiJ_G0030665) #30	MGP_SPRETEiJ_G0030664 ##28	Scgb2b26 (MGP_SPRETEiJ_G0030663) #31	Scgb1b24 (MGP_SPRETEiJ_G0030662) #32	Scgb2b24 (MGP_SPRETEiJ_G0030661) #33	Scgb1b2 (MGP_SPRETEiJ_G0030660) ##28	Gramd1a (MGP_SPRETEiJ_G0030659)	Scn1b (MGP_SPRETEiJ_G0030658)
Ryukyu mouse	MODERN SPECIES	16	Rgs9bp (MGP_CAROLIEiJ_G0029589)	Nudt19 (MGP_CAROLIEiJ_G0029588) #7	Tdrd12 (MGP_CAROLIEiJ_G0029587) #8	Slc7a9 (MGP_CAROLIEiJ_G0029586) #9	Cep89 (MGP_CAROLIEiJ_G0029585) #10	Faap24 (MGP_CAROLIEiJ_G0029584) #11	Rhpn2 (MGP_CAROLIEiJ_G0029583) #12	Gpatch1 (MGP_CAROLIEiJ_G0029582) #13	Lrp3 (MGP_CAROLIEiJ_G0029581) #15	Slc7a10 (MGP_CAROLIEiJ_G0029580) #16	Cebpa (MGP_CAROLIEiJ_G0029579) #17	Cebpg (MGP_CAROLIEiJ_G0029578) #18	Pepd (MGP_CAROLIEiJ_G0029577) #19	Chst8 (MGP_CAROLIEiJ_G0029576) #20	Kctd15 (MGP_CAROLIEiJ_G0029575) #21	Lsm14a (MGP_CAROLIEiJ_G0029574) #22	MGP_CAROLIEiJ_G0029573	Garre1 (MGP_CAROLIEiJ_G0029572) #23	Gpi1 (MGP_CAROLIEiJ_G0029571) #24	Pdcd2l (MGP_CAROLIEiJ_G0029570) #25	Uba2 (MGP_CAROLIEiJ_G0029569) #26	Wtip (MGP_CAROLIEiJ_G0029568) #27	Scgb1b30 (MGP_CAROLIEiJ_G0029567) #28	MGP_CAROLIEiJ_G0029566 ##30	MGP_CAROLIEiJ_G0029565 ##30	Scgb1b2 (MGP_CAROLIEiJ_G0029564) ##28	Gramd1a (MGP_CAROLIEiJ_G0029563)	Scn1b (MGP_CAROLIEiJ_G0029562)	Hpn (MGP_CAROLIEiJ_G0029561)	Fxyd3 (MGP_CAROLIEiJ_G0029560)	Lgi4 (MGP_CAROLIEiJ_G0029559)