Gnathostomata ANCESTRAL SPECIES 52 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000166016 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000159836 ENSGT00940000165234 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a ENSGT00940000159573 ENSGT00940000160432 ENSGT00940000175054 ENSGT00940000158005 Euteleostomi ANCESTRAL SPECIES 21 ENSGT00980000199357 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000166016 ENSGT00940000153657.B #19 ENSGT00940000159496 ENSGT00940000159100 #20 ENSGT00940000156453.b ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200 ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000165234 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a Sarcopterygii ANCESTRAL SPECIES 59 ENSGT00390000018876 #10 ENSGT00730000111020.a ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000166016 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200 ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000165234 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a Tetrapoda ANCESTRAL SPECIES 16 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000166016 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200 ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000165234 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a Amniota ANCESTRAL SPECIES 25 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000171246 ENSGT01030000235283 ENSGT00940000158339 #26 ENSGT00940000155200 ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000165234 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 Mammalia ANCESTRAL SPECIES 62 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000171246 ENSGT00940000158339 #26 Theria ANCESTRAL SPECIES 17 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00940000171246 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 Eutheria ANCESTRAL SPECIES 19 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00940000171246 ENSGT00550000074924 #27 ENSGT00940000160924 #28 Boreoeutheria ANCESTRAL SPECIES 5 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00940000169413 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00940000171246 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b Euarchontoglires ANCESTRAL SPECIES 5 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00940000169413 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 Primates ANCESTRAL SPECIES 28 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00940000169413 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000165494 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Haplorrhini ANCESTRAL SPECIES 35 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00940000169413 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000165494 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Simiiformes ANCESTRAL SPECIES 13 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00940000169413 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431.f #31 ENSGT00940000161431.e #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000165494 ENSGT00940000153062.A.a.a.a Catarrhini ANCESTRAL SPECIES ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00940000169413 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00910000148213 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00410000028752 #30 ENSGT00940000161431.f #31 ENSGT00940000161431.e.a #32 ENSGT00940000159953.C #33 ENSGT00910000147016 #34 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b Hominoidea ANCESTRAL SPECIES ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00940000169413 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00910000148213 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00410000028752 #30 ENSGT00940000161431.f #31 ENSGT00940000161431.e.a #32 ENSGT00940000159953.C #33 ENSGT00910000147016 #34 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b Hominidae ANCESTRAL SPECIES ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00410000028752 #30 ENSGT00940000161431.f #31 ENSGT00940000161431.e.a #32 ENSGT00940000159953.C #33 ENSGT00910000147016 #34 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 Homo/Pan/Gorilla group DUPLICATION Homo/Pan/Gorilla group DUPLICATION Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b.u.b ##12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000153272.a.b.p #17 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.x.a #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00410000028752 #30 ENSGT00940000161431.f #31 ENSGT00940000161431.e.a #32 ENSGT00940000159953.C #33 ENSGT00910000147016 #34 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 Homo/Pan group ANCESTRAL SPECIES ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b.u.b ##12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000153272.a.b.p #17 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.x.a #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00410000028752 #30 ENSGT00940000161431.f #31 ENSGT00940000161431.e.a #32 ENSGT00940000159953.C #33 ENSGT00910000147016 #34 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 Pan ANCESTRAL SPECIES 32 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b.u.b ##12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000153272.a.b.p #17 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00910000146490 #21 ENSGT00940000154415.x.a #22 ENSGT00390000003210 #23 ENSGT00390000007084.c.a.d.c.b #24 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00970000197666 ENSGT00940000161431.f #31 ENSGT00940000161431.e.a #32 ENSGT00940000159953.C #33 ENSGT00910000147016 #34 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b Chimpanzee MODERN SPECIES 10 NUDT19 (ENSPTRG00000034496) #7 TDRD12 (ENSPTRG00000010795) #8 SLC7A9 (ENSPTRG00000010796) #9 CEP89 (ENSPTRG00000010797) #10 FAAP24 (ENSPTRG00000010798) #11 RHPN2 (ENSPTRG00000010801) #12 GPATCH1 (ENSPTRG00000010803) #13 WDR88 (ENSPTRG00000010804) #14 LRP3 (ENSPTRG00000010806) #15 SLC7A10 (ENSPTRG00000010807) #16 ENSPTRG00000042479 #17 CEBPG (ENSPTRG00000046009) #18 PEPD (ENSPTRG00000010809) #19 CHST8 (ENSPTRG00000010810) #20 KCTD15 (ENSPTRG00000010811) #21 LSM14A (ENSPTRG00000010813) #22 GARRE1 (ENSPTRG00000010815) #23 ENSPTRG00000050033 #24 GPI (ENSPTRG00000010816) #25 PDCD2L (ENSPTRG00000010817) #26 UBA2 (ENSPTRG00000010818) #27 WTIP (ENSPTRG00000010819) #28 ENSPTRG00000044520 #29 SCGB2B2 (ENSPTRG00000046114) #30 ZNF302 (ENSPTRG00000010821) #31 ZNF181 (ENSPTRG00000024231) #32 ZNF599 (ENSPTRG00000010820) #33 ENSPTRG00000047579 #34 ZNF30 (ENSPTRG00000010822) #35 ZNF792 (ENSPTRG00000010823) #36 GRAMD1A (ENSPTRG00000010824) #37 Bonobo MODERN SPECIES 10 TDRD12 (ENSPPAG00000042284) #8 SLC7A9 (ENSPPAG00000040321) #9 CEP89 (ENSPPAG00000030028) #10 FAAP24 (ENSPPAG00000031426) #11 RHPN2 (ENSPPAG00000039976) ##12 GPATCH1 (ENSPPAG00000020990) #13 WDR88 (ENSPPAG00000033383) #14 LRP3 (ENSPPAG00000036881) #15 SLC7A10 (ENSPPAG00000029338) #16 ENSPPAG00000014349 ENSPPAG00000034757 #17 CEBPG (ENSPPAG00000024897) #18 PEPD (ENSPPAG00000028422) #19 CHST8 (ENSPPAG00000029683) #20 ENSPPAG00000032627 #21 LSM14A (ENSPPAG00000042618) #22 GARRE1 (ENSPPAG00000004002) #23 ENSPPAG00000014152 #24 GPI (ENSPPAG00000040008) #25 PDCD2L (ENSPPAG00000039869) #26 UBA2 (ENSPPAG00000030018) #27 ENSPPAG00000033678 #29 ENSPPAG00000000742 ZNF302 (ENSPPAG00000036226) #31 ZNF181 (ENSPPAG00000037202) #32 ENSPPAG00000037006 #33 ENSPPAG00000015596 #34 ENSPPAG00000000305 ZNF30 (ENSPPAG00000031910) #35 ZNF792 (ENSPPAG00000013308) #36 GRAMD1A (ENSPPAG00000039654) #37 Human MODERN SPECIES 10 NUDT19 (ENSG00000213965) #7 TDRD12 (ENSG00000173809) #8 SLC7A9 (ENSG00000021488) #9 CEP89 (ENSG00000121289) #10 FAAP24 (ENSG00000131944) #11 RHPN2 (ENSG00000131941) ##12 GPATCH1 (ENSG00000076650) #13 WDR88 (ENSG00000166359) #14 LRP3 (ENSG00000130881) #15 SLC7A10 (ENSG00000130876) #16 CEBPA (ENSG00000245848) CEBPG (ENSG00000153879) #18 PEPD (ENSG00000124299) #19 CHST8 (ENSG00000124302) #20 KCTD15 (ENSG00000153885) LSM14A (ENSG00000257103) #22 GARRE1 (ENSG00000166398) #23 GPI (ENSG00000105220) #25 ENSG00000266953 PDCD2L (ENSG00000126249) #26 UBA2 (ENSG00000126261) #27 WTIP (ENSG00000142279) #28 SCGB2B2 (ENSG00000205209) #30 ZNF302 (ENSG00000089335) #31 ZNF181 (ENSG00000197841) #32 ZNF599 (ENSG00000153896) #33 ZNF30 (ENSG00000168661) #35 ZNF792 (ENSG00000180884) #36 GRAMD1A (ENSG00000089351) #37 SCN1B (ENSG00000105711) HPN (ENSG00000105707) Gorilla MODERN SPECIES 10 TDRD12 (ENSGGOG00000011938) #8 SLC7A9 (ENSGGOG00000011960) #9 CEP89 (ENSGGOG00000014134) #10 ENSGGOG00000042319 #11 ENSGGOG00000013137 ##12 GPATCH1 (ENSGGOG00000010862) #13 WDR88 (ENSGGOG00000009952) #14 LRP3 (ENSGGOG00000006079) #15 SLC7A10 (ENSGGOG00000006085) #16 ENSGGOG00000039590 ENSGGOG00000036528 #17 CEBPG (ENSGGOG00000041030) #18 PEPD (ENSGGOG00000012143) #19 CHST8 (ENSGGOG00000007274) #20 ENSGGOG00000009581 #21 LSM14A (ENSGGOG00000001762) #22 GARRE1 (ENSGGOG00000010326) #23 ENSGGOG00000026575 #24 ENSGGOG00000043288 GPI (ENSGGOG00000016932) #25 PDCD2L (ENSGGOG00000022933) #26 UBA2 (ENSGGOG00000002517) #27 ENSGGOG00000027840 #28 ENSGGOG00000041162 #31 ENSGGOG00000039010 #29 SCGB2B2 (ENSGGOG00000008054) #30 ENSGGOG00000042698 ZNF302 (ENSGGOG00000001174) #31 ZNF181 (ENSGGOG00000022196) #32 ZNF599 (ENSGGOG00000012378) #33 ZNF30 (ENSGGOG00000022515) #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000154415.x.b ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00940000154415.x.b ##22 Pan ANCESTRAL SPECIES 22 ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT01100000263484.C.a ENSGT00390000018086.n.a.b.b ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00910000146906 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00390000010218.f.a.b.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b.c.c ENSGT00940000154415.x.b ##22 ENSGT00940000161696.c.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00910000146855.i.b ENSGT00390000004757.`b.b.a.b ENSGT00940000160585 ENSGT00410000028359 ENSGT00710000106860 ENSGT00950000183097.a.a.b ENSGT00940000159160 ENSGT00730000111163 ENSGT00940000161772 ENSGT00940000153137.a.b.b.a ENSGT00940000153655.A.a Chimpanzee MODERN SPECIES 4 SETDB2 (ENSPTRG00000005873) CAB39L (ENSPTRG00000005872) CDADC1 (ENSPTRG00000005871) MLNR (ENSPTRG00000045556) ENSPTRG00000051644 FNDC3A (ENSPTRG00000023284) CYSLTR2 (ENSPTRG00000045872) ENSPTRG00000045034 RCBTB2 (ENSPTRG00000005866) LPAR6 (ENSPTRG00000005865) RB1 (ENSPTRG00000005864) ITM2B (ENSPTRG00000005863) MED4 (ENSPTRG00000005861) ENSPTRG00000042329 SUCLA2 (ENSPTRG00000005859) ENSPTRG00000040949 ##22 ENSPTRG00000044084 HTR2A (ENSPTRG00000005858) ESD (ENSPTRG00000005857) LRCH1 (ENSPTRG00000005856) ENSPTRG00000052632 ENSPTRG00000046675 ENSPTRG00000046351 RUBCNL (ENSPTRG00000005855) ENSPTRG00000049827 LRRC63 (ENSPTRG00000005854) LCP1 (ENSPTRG00000005853) CPB2 (ENSPTRG00000005852) ZC3H13 (ENSPTRG00000005851) SIAH3 (ENSPTRG00000047082) CBY2 (ENSPTRG00000051708) Bonobo MODERN SPECIES 4 CAB39L (ENSPPAG00000029104) CDADC1 (ENSPPAG00000028450) MLNR (ENSPPAG00000027956) ENSPPAG00000032803 FNDC3A (ENSPPAG00000032461) CYSLTR2 (ENSPPAG00000003898) ENSPPAG00000029505 RCBTB2 (ENSPPAG00000038976) LPAR6 (ENSPPAG00000006621) ENSPPAG00000030030 RB1 (ENSPPAG00000002165) ENSPPAG00000040476 MED4 (ENSPPAG00000038697) NUDT15 (ENSPPAG00000037539) SUCLA2 (ENSPPAG00000037438) ENSPPAG00000039901 ##22 ENSPPAG00000035492 HTR2A (ENSPPAG00000000160) ESD (ENSPPAG00000029798) LRCH1 (ENSPPAG00000041174) ENSPPAG00000036752 ENSPPAG00000027262 VWA8 (ENSPPAG00000004808) RGCC (ENSPPAG00000034498) ENSPPAG00000019737 NAA16 (ENSPPAG00000027330) MTRF1 (ENSPPAG00000000050) KBTBD7 (ENSPPAG00000033088) ENSPPAG00000010953 KBTBD6 (ENSPPAG00000005767) WBP4 (ENSPPAG00000034971) Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT01050000244893.c.b.a ENSGT00390000007786.b ENSGT01100000263478.a.b ENSGT01100000263478.a.a ENSGT01100000263562.b.a.a.c.b ENSGT00390000004322.b ENSGT00390000016605 ENSGT00550000075069 ENSGT00390000014743 ENSGT00510000048131 ENSGT01050000244894.a.a.a.a ENSGT01030000234564.a.b ENSGT00390000003912 ENSGT00550000074829 ENSGT01100000263478.b.a.b.b.b.a.a.b.c.a.a.d.a.d ENSGT00940000154415.y ##22 ENSGT01100000263478.b.a.b.b.b.a.a.b.c.a.a.d.a.c ENSGT01100000263478.b.a.b.b.b.a.a.b.c.a.a.d.b ENSGT01100000263478.b.a.b.b.b.a.b.d.b.a ENSGT01100000263478.b.a.b.b.b.a.a.b.c.a.a.c ENSGT01100000263478.b.a.b.b.b.a.a.b.d ENSGT00940000162693 ENSGT00950000183060.a.b.b.b ENSGT00390000008006 ENSGT00390000010577 ENSGT00940000162969 ENSGT01100000263562.b.a.b ENSGT01100000263478.b.a.b.b.a.a.a.a.a.a.b ENSGT01100000263478.b.a.b.b.b.a.b.d.b.b.c ENSGT01100000263478.b.a.b.b.b.a.b.c.b.b ENSGT01100000263478.b.a.b.b.a.a.a.a.a.a.a.a.a.b.b.b.a Homo/Pan group ANCESTRAL SPECIES ENSGT01050000244893.c.b.a ENSGT00390000007786.b ENSGT01100000263478.a.b ENSGT01100000263478.a.a ENSGT01100000263562.b.a.a.c.b ENSGT00390000004322.b ENSGT00390000016605 ENSGT00550000075069 ENSGT00390000014743 ENSGT00510000048131 ENSGT01050000244894.a.a.a.a ENSGT01030000234564.a.b ENSGT00390000003912 ENSGT00550000074829 ENSGT01100000263478.b.a.b.b.b.a.a.b.c.a.a.d.a.d ENSGT00940000154415.y ##22 ENSGT01100000263478.b.a.b.b.b.a.a.b.c.a.a.d.a.c ENSGT01100000263478.b.a.b.b.b.a.a.b.c.a.a.d.b ENSGT01100000263478.b.a.b.b.b.a.b.d.b.a ENSGT01100000263478.b.a.b.b.b.a.a.b.c.a.a.c ENSGT01100000263478.b.a.b.b.b.a.a.b.d ENSGT00940000162693 ENSGT00950000183060.a.b.b.b ENSGT00390000008006 ENSGT00390000010577 ENSGT00940000162969 ENSGT01100000263562.b.a.b ENSGT01100000263478.b.a.b.b.a.a.a.a.a.a.b ENSGT01100000263478.b.a.b.b.b.a.b.d.b.b.c ENSGT01100000263478.b.a.b.b.b.a.b.c.b.b ENSGT01100000263478.b.a.b.b.a.a.a.a.a.a.a.a.a.b.b.b.a Pan ANCESTRAL SPECIES 9 ENSGT00390000007786.b ENSGT01100000263478.a.b ENSGT01100000263478.a.a ENSGT01100000263562.b.a.a.c.b ENSGT00390000004322.b.i ENSGT00390000004322.b.j ENSGT00390000016605 ENSGT00550000075069 ENSGT00390000014743 ENSGT00510000048131 ENSGT01050000244894.a.a.a.a ENSGT01030000234564.a.b ENSGT00390000003912 ENSGT00550000074829 ENSGT01100000263478.b.a.b.b.b.a.a.b.c.a.a.d.a.d ENSGT00940000154415.y ##22 ENSGT01100000263478.b.a.b.b.b.a.a.b.c.a.a.d.a.c ENSGT01100000263478.b.a.b.b.b.a.a.b.c.a.a.d.b ENSGT00550000074836.j ENSGT01100000263478.b.a.b.b.b.a.b.d.a.a.b ENSGT01100000263478.b.a.b.b.b.a.b.d.a.a.a ENSGT01100000263478.b.a.b.b.b.a.b.c.b.a ENSGT01100000263478.b.a.b.b.b.a.a.b.c.a.a.c ENSGT01100000263478.b.a.b.b.b.a.a.b.d ENSGT00940000162693 ENSGT00950000183060.a.b.b.b ENSGT00390000008006 ENSGT00390000010577 ENSGT00940000162969 ENSGT01100000263562.b.a.b ENSGT01100000263478.b.a.b.b.a.a.a.a.a.a.b Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 10 CACNG8 (ENSPTRG00000009560) CACNG6 (ENSPTRG00000011438) VSTM1 (ENSPTRG00000011439) TARM1 (ENSPTRG00000041141) ENSPTRG00000048476 NDUFA3 (ENSPTRG00000028890) TFPT (ENSPTRG00000011442) PRPF31 (ENSPTRG00000011443) CNOT3 (ENSPTRG00000011444) LENG1 (ENSPTRG00000011445) TMC4 (ENSPTRG00000011446) MBOAT7 (ENSPTRG00000033703) TSEN34 (ENSPTRG00000011448) RPS9 (ENSPTRG00000011449) ENSPTRG00000011451 ENSPTRG00000050794 ##22 LILRA6 (ENSPTRG00000028888) LILRB5 (ENSPTRG00000011452) ENSPTRG00000051523 LILRB2 (ENSPTRG00000011453) ENSPTRG00000046872 ENSPTRG00000048836 LILRA5 (ENSPTRG00000011455) LILRA4 (ENSPTRG00000011456) LAIR1 (ENSPTRG00000011457) TTYH1 (ENSPTRG00000011458) LENG8 (ENSPTRG00000011459) ENSPTRG00000011460 CDC42EP5 (ENSPTRG00000028887) LAIR2 (ENSPTRG00000011461) ENSPTRG00000011462 Chimpanzee MODERN SPECIES 780 ENSPTRG00000043812 ENSPTRG00000046855 ENSPTRG00000011440 NDUFA3 (ENSPTRG00000045461) ENSPTRG00000043910 ENSPTRG00000045480 ENSPTRG00000046717 ENSPTRG00000047750 ENSPTRG00000044530 ENSPTRG00000046112 ENSPTRG00000044768 RPS9 (ENSPTRG00000050995) LILRB3 (ENSPTRG00000043706) ENSPTRG00000050627 ##22 ENSPTRG00000045348 Orangutan MODERN SPECIES 10 NUDT19 (ENSPPYG00000035150) #7 TDRD12 (ENSPPYG00000009821) #8 SLC7A9 (ENSPPYG00000009822) #9 CEP89 (ENSPPYG00000032385) #10 FAAP24 (ENSPPYG00000033989) #11 RHPN2 (ENSPPYG00000009823) #12 GPATCH1 (ENSPPYG00000009824) #13 WDR88 (ENSPPYG00000009825) #14 LRP3 (ENSPPYG00000009826) #15 SLC7A10 (ENSPPYG00000009827) #16 CEBPA (ENSPPYG00000032021) CEBPG (ENSPPYG00000009828) #18 PEPD (ENSPPYG00000009829) #19 CHST8 (ENSPPYG00000010593) #20 KCTD15 (ENSPPYG00000009831) LSM14A (ENSPPYG00000009832) #22 ENSPPYG00000033040 ##24 GARRE1 (ENSPPYG00000009834) #23 GPI (ENSPPYG00000009835) #25 PDCD2L (ENSPPYG00000009836) #26 UBA2 (ENSPPYG00000009837) #27 WTIP (ENSPPYG00000009838) #28 SCGB2B2 (ENSPPYG00000009840) #30 ZNF302 (ENSPPYG00000038923) #31 ZNF181 (ENSPPYG00000009841) #32 ZNF599 (ENSPPYG00000009842) #33 ZNF30 (ENSPPYG00000009843) #35 ZNF792 (ENSPPYG00000009844) #36 GRAMD1A (ENSPPYG00000009845) #37 SCN1B (ENSPPYG00000009846) HPN (ENSPPYG00000009847) Gibbon DUPLICATION Gibbon DUPLICATION Gibbon DUPLICATION Gibbon MODERN SPECIES 12 ENSNLEG00000029219 RALB (ENSNLEG00000000919) ENSNLEG00000033832 EPB41L5 (ENSNLEG00000000875) PTPN4 (ENSNLEG00000000805) ENSNLEG00000027828 TMEM177 (ENSNLEG00000031534) CFAP221 (ENSNLEG00000010316) SCTR (ENSNLEG00000010307) TMEM37 (ENSNLEG00000030043) ENSNLEG00000010290 C2orf76 (ENSNLEG00000028895) STEAP3 (ENSNLEG00000010277) MARCO (ENSNLEG00000011875) ENSNLEG00000011874 ENSNLEG00000011873 #22 INSIG2 (ENSNLEG00000011862) CCDC93 (ENSNLEG00000011818) ENSNLEG00000031890 DDX18 (ENSNLEG00000011769) DPP10 (ENSNLEG00000011663) ACTR3 (ENSNLEG00000011619) SLC35F5 (ENSNLEG00000011590) GPR39 (ENSNLEG00000008318) LYPD1 (ENSNLEG00000008321) NCKAP5 (ENSNLEG00000008327) MGAT5 (ENSNLEG00000008354) ENSNLEG00000032873 TMEM163 (ENSNLEG00000008393) ACMSD (ENSNLEG00000008409) CCNT2 (ENSNLEG00000008432) Gibbon MODERN SPECIES 9 TOGARAM2 (ENSNLEG00000015371) PCARE (ENSNLEG00000015380) CLIP4 (ENSNLEG00000015382) ENSNLEG00000015414 YPEL5 (ENSNLEG00000015458) ENSNLEG00000034100 ENSNLEG00000033800 LBH (ENSNLEG00000027931) LCLAT1 (ENSNLEG00000015469) CAPN13 (ENSNLEG00000015477) GALNT14 (ENSNLEG00000015496) CAPN14 (ENSNLEG00000015527) EHD3 (ENSNLEG00000015546) XDH (ENSNLEG00000030142) SRD5A2 (ENSNLEG00000015569) ENSNLEG00000034705 #22 ENSNLEG00000015575 ENSNLEG00000015577 DPY30 (ENSNLEG00000028992) ENSNLEG00000032996 SPAST (ENSNLEG00000015600) SLC30A6 (ENSNLEG00000015647) NLRC4 (ENSNLEG00000015720) YIPF4 (ENSNLEG00000030159) BIRC6 (ENSNLEG00000015750) TTC27 (ENSNLEG00000015849) LTBP1 (ENSNLEG00000015915) RASGRP3 (ENSNLEG00000015972) FAM98A (ENSNLEG00000016012) ENSNLEG00000027605 CRIM1 (ENSNLEG00000016039) Gibbon MODERN SPECIES ENSNLEG00000007635 #8 SLC7A9 (ENSNLEG00000007638) #9 CEP89 (ENSNLEG00000007643) #10 ENSNLEG00000033704 ENSNLEG00000007654 #11 ENSNLEG00000030362 #12 GPATCH1 (ENSNLEG00000007659) #13 ENSNLEG00000035651 #14 LRP3 (ENSNLEG00000007676) #15 SLC7A10 (ENSNLEG00000007686) #16 CEBPG (ENSNLEG00000029852) #18 PEPD (ENSNLEG00000007701) #19 CHST8 (ENSNLEG00000011703) #20 ENSNLEG00000011708 ENSNLEG00000011709 #21 ENSNLEG00000011713 #22 ENSNLEG00000030392 GARRE1 (ENSNLEG00000011742) #23 ENSNLEG00000011762 #25 PDCD2L (ENSNLEG00000010662) #26 UBA2 (ENSNLEG00000010670) #27 ENSNLEG00000027149 #28 ZNF302 (ENSNLEG00000031505) #31 ZNF181 (ENSNLEG00000010833) #32 ZNF599 (ENSNLEG00000010836) #33 ZNF30 (ENSNLEG00000010855) #35 ZNF792 (ENSNLEG00000010860) #36 GRAMD1A (ENSNLEG00000010882) #37 ENSNLEG00000010968 HPN (ENSNLEG00000010970) ENSNLEG00000011027 Gibbon MODERN SPECIES 7 ENSNLEG00000015435 CARD11 (ENSNLEG00000010543) GNA12 (ENSNLEG00000033618) AMZ1 (ENSNLEG00000010620) BRAT1 (ENSNLEG00000010655) IQCE (ENSNLEG00000010709) MMADHC (ENSNLEG00000010795) ENSNLEG00000035632 RND3 (ENSNLEG00000010846) RBM43 (ENSNLEG00000010889) NMI (ENSNLEG00000010893) TNFAIP6 (ENSNLEG00000010934) RIF1 (ENSNLEG00000010955) NEB (ENSNLEG00000011170) ARL5A (ENSNLEG00000011191) ENSNLEG00000030371 #22 CACNB4 (ENSNLEG00000029444) STAM2 (ENSNLEG00000011293) ENSNLEG00000029701 ENSNLEG00000019196 FMNL2 (ENSNLEG00000026694) PRPF40A (ENSNLEG00000011324) ARL6IP6 (ENSNLEG00000011387) RPRM (ENSNLEG00000019197) GALNT13 (ENSNLEG00000011400) KCNJ3 (ENSNLEG00000011437) NR4A2 (ENSNLEG00000000629) GPD2 (ENSNLEG00000000655) ENSNLEG00000000733 GALNT5 (ENSNLEG00000000734) ENSNLEG00000028994 Cercopithecidae ANCESTRAL SPECIES 12 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00910000148213 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00410000028752 #30 ENSGT00940000161431.f #31 ENSGT00940000161431.e.a #32 ENSGT00940000159953.C #33 ENSGT00910000147016 #34 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b Cercopithecinae ANCESTRAL SPECIES 1 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00910000148213 ENSGT00390000003210 #23 ENSGT00390000000707.k.a.a.b #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431.f #31 ENSGT00410000028752 #30 ENSGT00940000161431.e.a #32 ENSGT00940000159953.C #33 ENSGT00910000147016 #34 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b Vervet Monkey MODERN SPECIES 25 NUDT19 (ENSCSAG00000004800) #7 TDRD12 (ENSCSAG00000004794) #8 SLC7A9 (ENSCSAG00000004775) #9 CEP89 (ENSCSAG00000004771) #10 FAAP24 (ENSCSAG00000004765) #11 RHPN2 (ENSCSAG00000004761) #12 GPATCH1 (ENSCSAG00000004743) #13 WDR88 (ENSCSAG00000004701) #14 LRP3 (ENSCSAG00000004689) #15 SLC7A10 (ENSCSAG00000004683) #16 CEBPA (ENSCSAG00000018515) CEBPG (ENSCSAG00000018517) #18 PEPD (ENSCSAG00000004677) #19 CHST8 (ENSCSAG00000004673) #20 KCTD15 (ENSCSAG00000004669) LSM14A (ENSCSAG00000004663) #22 ENSCSAG00000004652 ##24 GARRE1 (ENSCSAG00000004648) #23 GPI (ENSCSAG00000004646) #25 PDCD2L (ENSCSAG00000004642) #26 UBA2 (ENSCSAG00000004629) #27 WTIP (ENSCSAG00000004605) #28 ENSCSAG00000018519 ZNF302 (ENSCSAG00000004598) #31 ZNF181 (ENSCSAG00000004595) #32 ENSCSAG00000004593 ##33 ZNF30 (ENSCSAG00000004589) #35 ZNF792 (ENSCSAG00000004583) #36 GRAMD1A (ENSCSAG00000004579) #37 SCN1B (ENSCSAG00000004573) HPN (ENSCSAG00000004567) Cercopithecinae_a ANCESTRAL SPECIES 3 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469.h #16 ENSGT00940000153272.a.b.p #17 ENSGT00940000156469.g.b #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00910000146490 #21 ENSGT00940000154415 #22 ENSGT00910000148213 ENSGT00390000003210 #23 ENSGT00390000000707.k.b #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431.f #31 ENSGT00410000028752 #30 ENSGT00940000161431.e.a #32 ENSGT00940000159953.C #33 ENSGT00910000147016 #34 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b Macaca ANCESTRAL SPECIES 12 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291.d #14 ENSGT00940000160021 #15 ENSGT00940000156469.h #16 ENSGT00940000156469.g.a #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00910000146490 #21 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707.k.b #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431.f #31 ENSGT00940000161431.e.a #32 ENSGT00940000159953.C #33 ENSGT00910000147016 #34 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Macaca_a ANCESTRAL SPECIES 1 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291.d #14 ENSGT00940000156469.g.b #16 ENSGT00960000190924 ENSGT00940000160021 #15 ENSGT00940000156469.h #16 ENSGT00940000162291.c #14 ENSGT00940000156469.g.a #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00910000146490 #21 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707.k.b #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00690000102286.a.a.b ENSGT00940000161431.f #31 ENSGT00940000161431.e.a #32 ENSGT00940000159953.C #33 ENSGT00910000147016 #34 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 Rhesus MODERN SPECIES 10 TDRD12 (ENSMMUG00000015608) SLC7A9 (ENSMMUG00000028800) #9 CEP89 (ENSMMUG00000018351) #10 FAAP24 (ENSMMUG00000017939) #11 RHPN2 (ENSMMUG00000028798) #12 GPATCH1 (ENSMMUG00000011790) #13 ENSMMUG00000064983 LRP3 (ENSMMUG00000022872) #15 SLC7A10 (ENSMMUG00000022875) #16 CEBPG (ENSMMUG00000062413) #18 PEPD (ENSMMUG00000006128) #19 CHST8 (ENSMMUG00000018024) #20 KCTD15 (ENSMMUG00000011319) #21 ENSMMUG00000064000 ENSMMUG00000056492 LSM14A (ENSMMUG00000021614) #22 GARRE1 (ENSMMUG00000005879) #23 GPI (ENSMMUG00000005880) #25 PDCD2L (ENSMMUG00000005883) #26 UBA2 (ENSMMUG00000005884) #27 WTIP (ENSMMUG00000044736) #28 ENSMMUG00000057155 ZNF181 (ENSMMUG00000015744) #32 ZNF599 (ENSMMUG00000006440) #33 ZNF30 (ENSMMUG00000059543) #35 ZNF792 (ENSMMUG00000008313) #36 GRAMD1A (ENSMMUG00000001538) #37 ENSMMUG00000049799 SCN1B (ENSMMUG00000004843) HPN (ENSMMUG00000004844) FXYD3 (ENSMMUG00000022127) Crab-eating macaque MODERN SPECIES 10 NUDT19 (ENSMFAG00000042477) #7 ENSMFAG00000059021 TDRD12 (ENSMFAG00000044756) #8 SLC7A9 (ENSMFAG00000002286) #9 CEP89 (ENSMFAG00000001684) #10 FAAP24 (ENSMFAG00000054473) #11 RHPN2 (ENSMFAG00000043323) #12 GPATCH1 (ENSMFAG00000034418) #13 ENSMFAG00000063532 #14 ENSMFAG00000041307 #16 CEBPA (ENSMFAG00000059502) CEBPG (ENSMFAG00000054581) #18 PEPD (ENSMFAG00000034452) #19 CHST8 (ENSMFAG00000031076) #20 ENSMFAG00000043393 #21 LSM14A (ENSMFAG00000006057) #22 GARRE1 (ENSMFAG00000045350) #23 ENSMFAG00000036975 #25 PDCD2L (ENSMFAG00000041802) #26 UBA2 (ENSMFAG00000036932) #27 ENSMFAG00000047825 ZNF302 (ENSMFAG00000064263) #31 ZNF181 (ENSMFAG00000042050) #32 ZNF599 (ENSMFAG00000043723) #33 ENSMFAG00000063701 #34 ZNF30 (ENSMFAG00000041169) #35 ZNF792 (ENSMFAG00000036857) #36 GRAMD1A (ENSMFAG00000033196) #37 SCN1B (ENSMFAG00000032441) HPN (ENSMFAG00000041182) ENSMFAG00000051376 Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 218 RGS9BP (ENSMNEG00000014719) NUDT19 (ENSMNEG00000044868) #7 TDRD12 (ENSMNEG00000043067) #8 CEP89 (ENSMNEG00000034589) #10 FAAP24 (ENSMNEG00000016780) #11 RHPN2 (ENSMNEG00000032814) #12 GPATCH1 (ENSMNEG00000045084) #13 WDR88 (ENSMNEG00000029027) #14 LRP3 (ENSMNEG00000024475) #15 SLC7A10 (ENSMNEG00000037424) #16 CEBPG (ENSMNEG00000026159) #18 PEPD (ENSMNEG00000042698) #19 CHST8 (ENSMNEG00000034130) #20 ENSMNEG00000043755 #21 ENSMNEG00000028924 LSM14A (ENSMNEG00000039430) #22 GARRE1 (ENSMNEG00000043312) #23 ENSMNEG00000032530 #25 PDCD2L (ENSMNEG00000041101) #26 UBA2 (ENSMNEG00000033131) #27 WTIP (ENSMNEG00000042701) #28 ENSMNEG00000030080 #31 ZNF181 (ENSMNEG00000036115) #32 ZNF599 (ENSMNEG00000030825) #33 ENSMNEG00000045372 #34 ZNF30 (ENSMNEG00000042665) #35 ZNF792 (ENSMNEG00000032365) #36 GRAMD1A (ENSMNEG00000042054) #37 SCN1B (ENSMNEG00000042726) HPN (ENSMNEG00000037997) FXYD3 (ENSMNEG00000035253) Pig-tailed macaque MODERN SPECIES 248 CACNG8 (ENSMNEG00000034391) ENSMNEG00000027199 CACNG6 (ENSMNEG00000036747) VSTM1 (ENSMNEG00000044641) OSCAR (ENSMNEG00000042069) NDUFA3 (ENSMNEG00000030171) TFPT (ENSMNEG00000040504) PRPF31 (ENSMNEG00000035943) CNOT3 (ENSMNEG00000036750) LENG1 (ENSMNEG00000028408) TMC4 (ENSMNEG00000041790) MBOAT7 (ENSMNEG00000031094) TSEN34 (ENSMNEG00000045457) RPS9 (ENSMNEG00000013713) ENSMNEG00000035553 ENSMNEG00000045504 #22 ENSMNEG00000039879 ENSMNEG00000044258 LILRB5 (ENSMNEG00000027497) ENSMNEG00000011346 ENSMNEG00000039033 LILRA5 (ENSMNEG00000029440) LILRA4 (ENSMNEG00000031187) LAIR1 (ENSMNEG00000034676) TTYH1 (ENSMNEG00000038495) LENG8 (ENSMNEG00000033898) LENG9 (ENSMNEG00000036994) CDC42EP5 (ENSMNEG00000028376) LAIR2 (ENSMNEG00000012015) ENSMNEG00000044330 ENSMNEG00000033426 Cercopithecinae_b ANCESTRAL SPECIES 24 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469.h #16 ENSGT00940000153272.a.b.p #17 ENSGT00940000156469.g.b #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00910000146490 #21 ENSGT00940000154415 #22 ENSGT00910000148213 ENSGT00390000003210 #23 ENSGT00390000000707.l #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431.f #31 ENSGT00410000028752 #30 ENSGT00940000161431.e.a #32 ENSGT00940000159953.C #33 ENSGT00910000147016 #34 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b Olive baboon MODERN SPECIES 12 NUDT19 (ENSPANG00000011363) #7 TDRD12 (ENSPANG00000001203) #8 SLC7A9 (ENSPANG00000001204) #9 CEP89 (ENSPANG00000003158) #10 FAAP24 (ENSPANG00000024282) #11 RHPN2 (ENSPANG00000017034) #12 GPATCH1 (ENSPANG00000012374) #13 WDR88 (ENSPANG00000010853) #14 LRP3 (ENSPANG00000018901) #15 SLC7A10 (ENSPANG00000005447) #16 CEBPA (ENSPANG00000043187) CEBPG (ENSPANG00000016413) #18 PEPD (ENSPANG00000000267) #19 CHST8 (ENSPANG00000000268) #20 ENSPANG00000012956 #21 LSM14A (ENSPANG00000004462) #22 GARRE1 (ENSPANG00000007898) #23 GPI (ENSPANG00000008545) #25 UBA2 (ENSPANG00000010229) #27 WTIP (ENSPANG00000040349) #28 ENSPANG00000034319 #31 ENSPANG00000049842 ZNF302 (ENSPANG00000035857) #31 ZNF181 (ENSPANG00000050670) #32 ZNF599 (ENSPANG00000007896) #33 ENSPANG00000029420 #35 ZNF792 (ENSPANG00000030954) #36 GRAMD1A (ENSPANG00000026206) #37 SCN1B (ENSPANG00000003156) HPN (ENSPANG00000024281) FXYD3 (ENSPANG00000015620) Cercopithecinae_d ANCESTRAL SPECIES 26 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469.h #16 ENSGT00940000153272.a.b.p #17 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00910000146490 #21 ENSGT00940000154415 #22 ENSGT00910000148213 ENSGT00390000003210 #23 ENSGT00390000000707.l #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00410000028752 #30 ENSGT00940000161431.f #31 ENSGT00940000161431.e.a #32 ENSGT00940000159953.C #33 ENSGT00910000147016 #34 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b Sooty mangabey MODERN SPECIES 535 NUDT19 (ENSCATG00000034824) #7 TDRD12 (ENSCATG00000038627) #8 SLC7A9 (ENSCATG00000032830) #9 CEP89 (ENSCATG00000032749) #10 FAAP24 (ENSCATG00000037414) #11 RHPN2 (ENSCATG00000028263) #12 GPATCH1 (ENSCATG00000043637) #13 WDR88 (ENSCATG00000037627) #14 LRP3 (ENSCATG00000033824) #15 SLC7A10 (ENSCATG00000030571) #16 ENSCATG00000038303 #17 CEBPG (ENSCATG00000018455) #18 PEPD (ENSCATG00000039981) #19 CHST8 (ENSCATG00000039785) #20 ENSCATG00000000033 #21 LSM14A (ENSCATG00000021731) #22 GARRE1 (ENSCATG00000039009) #23 GPI (ENSCATG00000010622) #25 PDCD2L (ENSCATG00000032786) #26 UBA2 (ENSCATG00000038871) #27 WTIP (ENSCATG00000030260) #28 ENSCATG00000029020 #31 SCGB2B2 (ENSCATG00000039749) #30 ZNF181 (ENSCATG00000034198) #32 ZNF599 (ENSCATG00000032515) #33 ZNF30 (ENSCATG00000043518) #35 ZNF792 (ENSCATG00000038214) #36 GRAMD1A (ENSCATG00000039257) #37 SCN1B (ENSCATG00000043528) HPN (ENSCATG00000034678) ENSCATG00000035623 Drill MODERN SPECIES 851 CHST8 (ENSMLEG00000028465) #20 KCTD15 (ENSMLEG00000040099) ENSMLEG00000037275 LSM14A (ENSMLEG00000031762) #22 ENSMLEG00000029853 GARRE1 (ENSMLEG00000041049) #23 GPI (ENSMLEG00000012910) #25 PDCD2L (ENSMLEG00000034844) #26 UBA2 (ENSMLEG00000038395) #27 WTIP (ENSMLEG00000028709) #28 ENSMLEG00000042526 #31 SCGB2B2 (ENSMLEG00000036264) #30 ZNF302 (ENSMLEG00000037175) #31 ZNF181 (ENSMLEG00000037945) #32 ZNF599 (ENSMLEG00000043260) #33 ENSMLEG00000041268 #34 ZNF30 (ENSMLEG00000039067) #35 ZNF792 (ENSMLEG00000041522) #36 GRAMD1A (ENSMLEG00000033825) #37 Rhinopithecus ANCESTRAL SPECIES 33 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00960000190924 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00910000146490 #21 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00410000028752 #30 ENSGT00940000161431.f #31 ENSGT00940000161431.e.b #29 ENSGT00940000161431.e.a #32 ENSGT00940000159953.C #33 ENSGT00910000147016 #34 ENSGT00940000164353 #35 ENSGT00950000182891.a.a.b.a.b.b.b.o.e ENSGT00940000162928 #36 ENSGT00940000161007 #37 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 1364 ENSRBIG00000021477 #22 GARRE1 (ENSRBIG00000016339) #23 GPI (ENSRBIG00000040077) #25 PDCD2L (ENSRBIG00000024929) #26 UBA2 (ENSRBIG00000031815) #27 WTIP (ENSRBIG00000019352) #28 SCGB2B2 (ENSRBIG00000041036) #30 ZNF302 (ENSRBIG00000025124) #31 ENSRBIG00000042291 #29 ZNF599 (ENSRBIG00000037578) #33 ENSRBIG00000029379 #34 ZNF30 (ENSRBIG00000044053) #35 ENSRBIG00000005824 ZNF792 (ENSRBIG00000011582) #36 GRAMD1A (ENSRBIG00000035687) #37 SCN1B (ENSRBIG00000035349) Black snub-nosed monkey MODERN SPECIES 1035 ENSRBIG00000026850 ENSRBIG00000044057 #22 ZNF644 (ENSRBIG00000027530) BARHL2 (ENSRBIG00000041678) ENSRBIG00000039646 ZNF326 (ENSRBIG00000028780) LRRC8C (ENSRBIG00000036400) LRRC8B (ENSRBIG00000028115) Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 833 WDR88 (ENSRROG00000033505) #14 LRP3 (ENSRROG00000045555) #15 SLC7A10 (ENSRROG00000038295) #16 ENSRROG00000033059 CEBPG (ENSRROG00000022110) #18 PEPD (ENSRROG00000028633) #19 CHST8 (ENSRROG00000038306) #20 ENSRROG00000032340 #21 ENSRROG00000037711 #22 GARRE1 (ENSRROG00000031772) #23 ENSRROG00000045727 #25 PDCD2L (ENSRROG00000035143) #26 UBA2 (ENSRROG00000032026) #27 WTIP (ENSRROG00000024707) #28 SCGB2B2 (ENSRROG00000030386) #30 ZNF302 (ENSRROG00000039066) #31 Golden snub-nosed monkey MODERN SPECIES 1054 ENSRROG00000038374 #22 Golden snub-nosed monkey MODERN SPECIES 1851 ENSRROG00000037070 ENSRROG00000032807 ENSRROG00000034183 #22 ENSRROG00000001736 ENSRROG00000038329 HSF2 (ENSRROG00000037762) SERINC1 (ENSRROG00000041960) ENSRROG00000005077 PKIB (ENSRROG00000037883) FABP7 (ENSRROG00000041911) SMPDL3A (ENSRROG00000000067) CLVS2 (ENSRROG00000010239) TRDN (ENSRROG00000029843) ENSRROG00000031083 Platyrrhini ANCESTRAL SPECIES 25 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431.f.g #31 ENSGT00940000161431.f.h #31 ENSGT00940000161431.e #32 ENSGT00940000159953.C #33 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Cebidae ANCESTRAL SPECIES 8 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431.f.g #31 ENSGT00940000161431.f.h #31 ENSGT00940000161431.e #32 ENSGT00940000159953.C #33 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Marmoset MODERN SPECIES 14 TDRD12 (ENSCJAG00000000763) #8 SLC7A9 (ENSCJAG00000000755) #9 CEP89 (ENSCJAG00000000731) #10 FAAP24 (ENSCJAG00000048468) #11 RHPN2 (ENSCJAG00000000708) #12 GPATCH1 (ENSCJAG00000000684) #13 WDR88 (ENSCJAG00000000669) #14 LRP3 (ENSCJAG00000000662) #15 SLC7A10 (ENSCJAG00000000642) #16 ENSCJAG00000062617 CEBPG (ENSCJAG00000045796) #18 PEPD (ENSCJAG00000000637) #19 CHST8 (ENSCJAG00000010344) #20 KCTD15 (ENSCJAG00000046488) ENSCJAG00000011442 LSM14A (ENSCJAG00000010360) #22 GARRE1 (ENSCJAG00000010433) #23 GPI (ENSCJAG00000010910) #25 PDCD2L (ENSCJAG00000010896) #26 UBA2 (ENSCJAG00000010797) #27 WTIP (ENSCJAG00000010790) #28 ENSCJAG00000010784 #31 ENSCJAG00000057553 #31 ZNF181 (ENSCJAG00000035239) #32 ZNF599 (ENSCJAG00000010750) #33 ENSCJAG00000079222 ZNF792 (ENSCJAG00000045864) #36 GRAMD1A (ENSCJAG00000010702) #37 SCN1B (ENSCJAG00000036273) HPN (ENSCJAG00000010660) FXYD3 (ENSCJAG00000010643) Cebidae_a DUPLICATION Cebidae_a DUPLICATION Cebidae_a ANCESTRAL SPECIES 22 ENSGT00940000157114 ENSGT00940000158436 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00390000006114 ENSGT00510000048428 ENSGT00390000003924.q ENSGT00940000158893 ENSGT00940000157126 ENSGT00940000159519 ENSGT00940000158261 ENSGT00990000203615.b.b ENSGT00730000112089 ENSGT01080000257365.b.a.b.a.b ENSGT00940000154313.d ENSGT00940000154415.k.a #22 ENSGT00940000159663 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000158740 ENSGT00530000063252.a.a ENSGT00940000155418.b ENSGT00940000153306.A.b ENSGT00940000159642 ENSGT00410000029180 ENSGT00940000155801 ENSGT00910000147021 ENSGT00950000182856.b ENSGT00940000158679 ENSGT00940000160304 Capuchin MODERN SPECIES SRPRA (ENSCCAG00000025602) FOXRED1 (ENSCCAG00000025248) TIRAP (ENSCCAG00000035574) ENSCCAG00000028368 DCPS (ENSCCAG00000030779) ST3GAL4 (ENSCCAG00000034084) KIRREL3 (ENSCCAG00000026745) ENSCCAG00000030721 ETS1 (ENSCCAG00000025251) FLI1 (ENSCCAG00000014342) KCNJ1 (ENSCCAG00000027825) C11orf45 (ENSCCAG00000035237) KCNJ5 (ENSCCAG00000021826) ENSCCAG00000000172 ARHGAP32 (ENSCCAG00000036347) ENSCCAG00000037290 #22 BARX2 (ENSCCAG00000027214) TMEM45B (ENSCCAG00000024426) NFRKB (ENSCCAG00000022547) PRDM10 (ENSCCAG00000024567) APLP2 (ENSCCAG00000019969) ST14 (ENSCCAG00000028292) ZBTB44 (ENSCCAG00000037104) ENSCCAG00000028017 ENSCCAG00000017888 ADAMTS8 (ENSCCAG00000033274) ENSCCAG00000025149 ADAMTS15 (ENSCCAG00000025182) ENSCCAG00000025145 SNX19 (ENSCCAG00000025535) NTM (ENSCCAG00000025571) Bolivian squirrel monkey MODERN SPECIES 107 IQSEC3 (ENSSBOG00000018072) SLC6A12 (ENSSBOG00000022417) SLC6A13 (ENSSBOG00000033423) ENSSBOG00000022767 ENSSBOG00000031486 KDM5A (ENSSBOG00000031418) CCDC77 (ENSSBOG00000024270) ENSSBOG00000035309 B4GALNT3 (ENSSBOG00000023436) NINJ2 (ENSSBOG00000032345) WNK1 (ENSSBOG00000028245) RAD52 (ENSSBOG00000032939) ENSSBOG00000029011 ENSSBOG00000023312 #22 ERC1 (ENSSBOG00000021005) FBXL14 (ENSSBOG00000034204) WNT5B (ENSSBOG00000033882) ADIPOR2 (ENSSBOG00000020738) ENSSBOG00000016865 CACNA2D4 (ENSSBOG00000019681) LRTM2 (ENSSBOG00000033302) DCP1B (ENSSBOG00000033086) CACNA1C (ENSSBOG00000026918) ENSSBOG00000016448 ENSSBOG00000022374 CLEC2A (ENSSBOG00000020932) KLRF2 (ENSSBOG00000031218) CLEC12A (ENSSBOG00000033102) CLEC1B (ENSSBOG00000020193) Cebidae_a ANCESTRAL SPECIES 12 ENSGT00390000005104 ENSGT00390000002766.b.a ENSGT00390000001174 ENSGT00940000155435.A ENSGT00940000161633 ENSGT00940000158681 ENSGT00940000157023 ENSGT00390000018298 ENSGT00940000161641 ENSGT00940000160751 ENSGT00390000017913 ENSGT00940000158168 ENSGT00390000015980 ENSGT00390000004096 ENSGT00940000157208 ENSGT00940000154415.k.b #22 ENSGT00940000162209 ENSGT00940000161266 ENSGT00940000156456 ENSGT00940000161601 ENSGT00730000111293 ENSGT00940000160075 ENSGT00390000002757 ENSGT00940000154964 ENSGT00940000153497.E ENSGT00940000158435 ENSGT00890000139496 ENSGT00940000155893.b ENSGT00940000154509 ENSGT00390000003738.a.b ENSGT00940000155708 Bolivian squirrel monkey MODERN SPECIES 54 NMD3 (ENSSBOG00000024021) SPTSSB (ENSSBOG00000019607) ENSSBOG00000030988 OTOL1 (ENSSBOG00000028845) SI (ENSSBOG00000025982) SLITRK3 (ENSSBOG00000005267) BCHE (ENSSBOG00000014953) ZBBX (ENSSBOG00000035563) SERPINI2 (ENSSBOG00000025243) ENSSBOG00000018966 PDCD10 (ENSSBOG00000033754) SERPINI1 (ENSSBOG00000035807) ENSSBOG00000031738 GOLIM4 (ENSSBOG00000002733) MECOM (ENSSBOG00000020296) ENSSBOG00000022336 #22 ACTRT3 (ENSSBOG00000034306) MYNN (ENSSBOG00000023232) LRRC34 (ENSSBOG00000031617) LRRIQ4 (ENSSBOG00000028170) LRRC31 (ENSSBOG00000029022) SAMD7 (ENSSBOG00000034829) SEC62 (ENSSBOG00000023568) PHC3 (ENSSBOG00000012175) ENSSBOG00000029918 ENSSBOG00000034894 PRKCI (ENSSBOG00000028708) SKIL (ENSSBOG00000029173) SLC7A14 (ENSSBOG00000021295) CLDN11 (ENSSBOG00000033006) ENSSBOG00000022346 Capuchin MODERN SPECIES 287 ENSCCAG00000021765 GOLIM4 (ENSCCAG00000037090) MECOM (ENSCCAG00000027164) ENSCCAG00000027019 #22 ACTRT3 (ENSCCAG00000030087) ENSCCAG00000029597 LRRC34 (ENSCCAG00000030982) LRRIQ4 (ENSCCAG00000028249) LRRC31 (ENSCCAG00000022156) SAMD7 (ENSCCAG00000029101) SEC62 (ENSCCAG00000031533) PHC3 (ENSCCAG00000026681) ENSCCAG00000030494 PRKCI (ENSCCAG00000023151) ENSCCAG00000034438 SKIL (ENSCCAG00000030392) CLDN11 (ENSCCAG00000030066) SLC7A14 (ENSCCAG00000034318) ENSCCAG00000034537 Cebidae_a ANCESTRAL SPECIES 35 ENSGT00940000157021 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.l #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431.f.g #31 ENSGT00940000161431.f.h #31 ENSGT00940000161431.e #32 ENSGT00940000159953.C #33 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 134 ANKRD27 (ENSSBOG00000003371) TDRD12 (ENSSBOG00000034916) #8 SLC7A9 (ENSSBOG00000026844) #9 CEP89 (ENSSBOG00000020185) #10 ENSSBOG00000032597 #11 RHPN2 (ENSSBOG00000019588) #12 ENSSBOG00000015947 GPATCH1 (ENSSBOG00000034650) #13 WDR88 (ENSSBOG00000025893) #14 LRP3 (ENSSBOG00000035415) #15 SLC7A10 (ENSSBOG00000027542) #16 CEBPG (ENSSBOG00000019291) #18 PEPD (ENSSBOG00000007422) #19 CHST8 (ENSSBOG00000004821) #20 ENSSBOG00000032093 #21 LSM14A (ENSSBOG00000020141) #22 GARRE1 (ENSSBOG00000025947) #23 GPI (ENSSBOG00000026671) #25 PDCD2L (ENSSBOG00000031958) #26 ENSSBOG00000035469 WTIP (ENSSBOG00000026686) #28 ZNF181 (ENSSBOG00000032015) #32 ZNF792 (ENSSBOG00000025681) #36 GRAMD1A (ENSSBOG00000022351) #37 SCN1B (ENSSBOG00000020620) HPN (ENSSBOG00000003736) FXYD3 (ENSSBOG00000027763) LGI4 (ENSSBOG00000033090) FXYD1 (ENSSBOG00000034880) ENSSBOG00000019460 ENSSBOG00000036174 Bolivian squirrel monkey MODERN SPECIES 50 ENSSBOG00000034800 RPUSD4 (ENSSBOG00000030413) ENSSBOG00000025763 SRPRA (ENSSBOG00000035892) FOXRED1 (ENSSBOG00000029113) TIRAP (ENSSBOG00000022406) ENSSBOG00000021447 ST3GAL4 (ENSSBOG00000036081) KIRREL3 (ENSSBOG00000036169) ETS1 (ENSSBOG00000025251) FLI1 (ENSSBOG00000035447) KCNJ1 (ENSSBOG00000028025) ENSSBOG00000030088 KCNJ5 (ENSSBOG00000021100) ARHGAP32 (ENSSBOG00000020351) ENSSBOG00000021178 #22 BARX2 (ENSSBOG00000013815) ENSSBOG00000018527 TMEM45B (ENSSBOG00000023569) NFRKB (ENSSBOG00000030676) PRDM10 (ENSSBOG00000008773) APLP2 (ENSSBOG00000024822) ENSSBOG00000033193 ST14 (ENSSBOG00000023749) ZBTB44 (ENSSBOG00000018257) ADAMTS8 (ENSSBOG00000029745) ADAMTS15 (ENSSBOG00000022891) SNX19 (ENSSBOG00000023782) NTM (ENSSBOG00000006706) OPCML (ENSSBOG00000026714) LRRC32 (ENSSBOG00000034148) Capuchin DUPLICATION Capuchin DUPLICATION Capuchin MODERN SPECIES 318 ANKRD27 (ENSCCAG00000016931) NUDT19 (ENSCCAG00000028602) #7 TDRD12 (ENSCCAG00000037592) #8 SLC7A9 (ENSCCAG00000036558) #9 CEP89 (ENSCCAG00000036855) #10 FAAP24 (ENSCCAG00000037323) #11 RHPN2 (ENSCCAG00000027366) #12 GPATCH1 (ENSCCAG00000024676) #13 WDR88 (ENSCCAG00000035634) #14 LRP3 (ENSCCAG00000028610) #15 SLC7A10 (ENSCCAG00000037990) #16 CEBPG (ENSCCAG00000008678) #18 PEPD (ENSCCAG00000025441) #19 CHST8 (ENSCCAG00000035748) #20 KCTD15 (ENSCCAG00000025481) ENSCCAG00000037033 #22 GARRE1 (ENSCCAG00000035654) #23 GPI (ENSCCAG00000014850) #25 PDCD2L (ENSCCAG00000034078) #26 UBA2 (ENSCCAG00000031586) #27 WTIP (ENSCCAG00000037925) #28 ENSCCAG00000023060 #31 ENSCCAG00000035764 #31 ZNF181 (ENSCCAG00000035846) #32 ZNF599 (ENSCCAG00000024107) #33 ZNF792 (ENSCCAG00000035974) #36 GRAMD1A (ENSCCAG00000036947) #37 SCN1B (ENSCCAG00000030456) HPN (ENSCCAG00000038130) FXYD3 (ENSCCAG00000024435) LGI4 (ENSCCAG00000034891) Capuchin MODERN SPECIES 54 ENSCCAG00000017345 RGS6 (ENSCCAG00000029956) ENSCCAG00000021283 DPF3 (ENSCCAG00000034749) DCAF4 (ENSCCAG00000033783) ZFYVE1 (ENSCCAG00000031934) ENSCCAG00000009724 RBM25 (ENSCCAG00000030446) PSEN1 (ENSCCAG00000036998) PAPLN (ENSCCAG00000032497) NUMB (ENSCCAG00000029310) RIOX1 (ENSCCAG00000019473) HEATR4 (ENSCCAG00000024834) ENSCCAG00000026985 ACOT4 (ENSCCAG00000026334) ENSCCAG00000028536 #22 ACOT6 (ENSCCAG00000030425) DNAL1 (ENSCCAG00000024968) PNMA1 (ENSCCAG00000015385) MIDEAS (ENSCCAG00000037089) PTGR2 (ENSCCAG00000033557) ZNF410 (ENSCCAG00000030057) FAM161B (ENSCCAG00000032037) COQ6 (ENSCCAG00000032550) ENTPD5 (ENSCCAG00000027798) BBOF1 (ENSCCAG00000025685) ALDH6A1 (ENSCCAG00000033515) LIN52 (ENSCCAG00000031296) VSX2 (ENSCCAG00000023324) ENSCCAG00000032477 VRTN (ENSCCAG00000019702) Capuchin MODERN SPECIES 179 IQSEC3 (ENSCCAG00000036802) ENSCCAG00000028449 SLC6A12 (ENSCCAG00000026271) SLC6A13 (ENSCCAG00000038060) ENSCCAG00000037573 KDM5A (ENSCCAG00000028443) ENSCCAG00000028618 CCDC77 (ENSCCAG00000029748) B4GALNT3 (ENSCCAG00000026430) ENSCCAG00000029186 NINJ2 (ENSCCAG00000037635) WNK1 (ENSCCAG00000019690) RAD52 (ENSCCAG00000035863) ENSCCAG00000015603 ENSCCAG00000034320 ENSCCAG00000038098 #22 ERC1 (ENSCCAG00000025128) WNT5B (ENSCCAG00000025300) FBXL14 (ENSCCAG00000032598) ADIPOR2 (ENSCCAG00000024551) CACNA2D4 (ENSCCAG00000033080) LRTM2 (ENSCCAG00000038104) DCP1B (ENSCCAG00000026870) CACNA1C (ENSCCAG00000036466) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 399 ZBBX (ENSANAG00000025136) SERPINI2 (ENSANAG00000035047) WDR49 (ENSANAG00000035397) PDCD10 (ENSANAG00000022358) SERPINI1 (ENSANAG00000032063) GOLIM4 (ENSANAG00000028370) MECOM (ENSANAG00000024599) ENSANAG00000031175 #22 ACTRT3 (ENSANAG00000035854) MYNN (ENSANAG00000037625) LRRC34 (ENSANAG00000020908) LRRIQ4 (ENSANAG00000032367) LRRC31 (ENSANAG00000032184) SAMD7 (ENSANAG00000023344) SEC62 (ENSANAG00000032999) ENSANAG00000027063 PHC3 (ENSANAG00000024638) Mas night monkey MODERN SPECIES 933 ENSANAG00000021243 #21 LSM14A (ENSANAG00000019299) #22 GARRE1 (ENSANAG00000030007) #23 GPI (ENSANAG00000010089) #25 PDCD2L (ENSANAG00000013267) #26 UBA2 (ENSANAG00000022896) #27 WTIP (ENSANAG00000036630) #28 ENSANAG00000033310 #31 ZNF181 (ENSANAG00000018173) #32 ZNF599 (ENSANAG00000033145) #33 ZNF792 (ENSANAG00000036753) #36 GRAMD1A (ENSANAG00000032023) #37 SCN1B (ENSANAG00000022212) HPN (ENSANAG00000032541) FXYD3 (ENSANAG00000027299) LGI4 (ENSANAG00000031634) FXYD1 (ENSANAG00000006861) Mas night monkey MODERN SPECIES 527 RPUSD4 (ENSANAG00000024050) FAM118B (ENSANAG00000037007) SRPRA (ENSANAG00000020346) FOXRED1 (ENSANAG00000037638) TIRAP (ENSANAG00000021263) ENSANAG00000021856 ST3GAL4 (ENSANAG00000034387) KIRREL3 (ENSANAG00000029778) ETS1 (ENSANAG00000024306) FLI1 (ENSANAG00000037672) KCNJ1 (ENSANAG00000025095) KCNJ5 (ENSANAG00000004276) ENSANAG00000027716 TP53AIP1 (ENSANAG00000023283) ARHGAP32 (ENSANAG00000025440) ENSANAG00000034149 #22 BARX2 (ENSANAG00000027499) Tarsier MODERN SPECIES 1473 LSM14A (ENSTSYG00000004515) #22 Strepsirrhini DUPLICATION Strepsirrhini DUPLICATION Strepsirrhini ANCESTRAL SPECIES 36 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.i.a #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924.w #27 ENSGT00940000160924 #28 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 ENSGT00940000153062.C Lemuriformes ANCESTRAL SPECIES 29 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.i.a #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924.w #27 ENSGT00940000160924 #28 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 ENSGT00940000153062.C Lemuriformes_a ANCESTRAL SPECIES ENSGT00940000154415.i.a #22 Greater bamboo lemur MODERN SPECIES 240 CHST8 (ENSPSMG00000016045) #20 KCTD15 (ENSPSMG00000016028) ENSPSMG00000016011 LSM14A (ENSPSMG00000015955) #22 GARRE1 (ENSPSMG00000015840) #23 GPI (ENSPSMG00000015796) #25 PDCD2L (ENSPSMG00000015705) #26 UBA2 (ENSPSMG00000015679) #27 WTIP (ENSPSMG00000015621) #28 ENSPSMG00000015606 ENSPSMG00000015555 #32 ZNF599 (ENSPSMG00000015499) #33 ENSPSMG00000015486 Coquerels sifaka MODERN SPECIES 423 ENSPCOG00000021889 IPP (ENSPCOG00000027838) TMEM69 (ENSPCOG00000022363) ENSPCOG00000019845 CCDC17 (ENSPCOG00000015050) NASP (ENSPCOG00000017562) ENSPCOG00000011078 ENSPCOG00000018952 ENSPCOG00000017950 MMACHC (ENSPCOG00000019121) CCDC163 (ENSPCOG00000027692) TESK2 (ENSPCOG00000015589) TOE1 (ENSPCOG00000000982) MUTYH (ENSPCOG00000003845) ZSWIM5 (ENSPCOG00000002044) ENSPCOG00000016314 #22 ENSPCOG00000003474 HECTD3 (ENSPCOG00000027463) EIF2B3 (ENSPCOG00000002001) PTCH2 (ENSPCOG00000028853) BTBD19 (ENSPCOG00000019146) PLK3 (ENSPCOG00000028858) BEST4 (ENSPCOG00000018370) RPS8 (ENSPCOG00000013450) KIF2C (ENSPCOG00000008347) ARMH1 (ENSPCOG00000021887) TMEM53 (ENSPCOG00000009563) RNF220 (ENSPCOG00000026173) ERI3 (ENSPCOG00000021223) DMAP1 (ENSPCOG00000013712) ENSPCOG00000023765 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 14 TDRD12 (ENSMICG00000003623) #8 SLC7A9 (ENSMICG00000046921) #9 CEP89 (ENSMICG00000003646) #10 FAAP24 (ENSMICG00000044088) #11 RHPN2 (ENSMICG00000003663) #12 ENSMICG00000028269 GPATCH1 (ENSMICG00000004829) #13 WDR88 (ENSMICG00000017262) #14 LRP3 (ENSMICG00000032993) #15 SLC7A10 (ENSMICG00000045526) #16 CEBPA (ENSMICG00000029472) CEBPG (ENSMICG00000045141) #18 PEPD (ENSMICG00000013428) #19 CHST8 (ENSMICG00000044697) #20 KCTD15 (ENSMICG00000034643) ENSMICG00000011598 #22 ENSMICG00000035342 GARRE1 (ENSMICG00000011605) #23 ENSMICG00000011620 #25 ENSMICG00000045340 UBA2 (ENSMICG00000011636) #27 WTIP (ENSMICG00000036036) #28 ENSMICG00000046177 ENSMICG00000026623 #32 ZNF599 (ENSMICG00000017042) #33 ZNF30 (ENSMICG00000028219) #35 ZNF792 (ENSMICG00000043081) #36 GRAMD1A (ENSMICG00000001389) #37 SCN1B (ENSMICG00000012087) HPN (ENSMICG00000002167) ENSMICG00000044563 Mouse lemur MODERN SPECIES 169 ENSMICG00000005033 POF1B (ENSMICG00000005035) ENSMICG00000028499 ENSMICG00000046563 CHM (ENSMICG00000029091) DACH2 (ENSMICG00000001391) ENSMICG00000038744 KLHL4 (ENSMICG00000017361) ENSMICG00000043678 ENSMICG00000026541 NAP1L3 (ENSMICG00000001406) ENSMICG00000037025 ENSMICG00000036794 CPXCR1 (ENSMICG00000002763) ENSMICG00000035289 ENSMICG00000034290 #22 ENSMICG00000026503 PABPC5 (ENSMICG00000041706) ENSMICG00000031126 ENSMICG00000031336 ENSMICG00000035434 ENSMICG00000027493 ZMAT1 (ENSMICG00000003313) ENSMICG00000010798 ENSMICG00000043755 ARMCX4 (ENSMICG00000028167) GLA (ENSMICG00000034053) ENSMICG00000047163 ENSMICG00000031642 BTK (ENSMICG00000015601) TIMM8A (ENSMICG00000038724) Bushbaby MODERN SPECIES 250 NUDT19 (ENSOGAG00000026276) #7 TDRD12 (ENSOGAG00000001571) #8 SLC7A9 (ENSOGAG00000012118) #9 CEP89 (ENSOGAG00000001573) #10 FAAP24 (ENSOGAG00000001576) #11 RHPN2 (ENSOGAG00000001578) #12 GPATCH1 (ENSOGAG00000004016) #13 WDR88 (ENSOGAG00000004017) #14 LRP3 (ENSOGAG00000034429) #15 SLC7A10 (ENSOGAG00000029800) #16 CEBPA (ENSOGAG00000024661) CEBPG (ENSOGAG00000010436) #18 PEPD (ENSOGAG00000010439) #19 CHST8 (ENSOGAG00000025594) #20 KCTD15 (ENSOGAG00000012657) ENSOGAG00000002492 #22 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000154415.i.b #22 Bushbaby MODERN SPECIES 363 ENSOGAG00000031379 ENSOGAG00000024066 #22 ENSOGAG00000002201 ENSOGAG00000002202 ENSOGAG00000025040 TCEAL8 (ENSOGAG00000015533) ENSOGAG00000027892 ENSOGAG00000025432 ENSOGAG00000014850 TCEAL7 (ENSOGAG00000028590) ENSOGAG00000014854 BEX3 (ENSOGAG00000014857) ENSOGAG00000027934 ENSOGAG00000034552 TCEAL4 (ENSOGAG00000030967) ENSOGAG00000005299 ENSOGAG00000011845 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000154415.j #22 Lemuriformes ANCESTRAL SPECIES ENSGT00940000154415.j #22 Lemuriformes_a ANCESTRAL SPECIES 56 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.j #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924.w #27 ENSGT00940000160924 #28 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 ENSGT00940000153062.C Coquerels sifaka MODERN SPECIES 501 PEPD (ENSPCOG00000016284) #19 CHST8 (ENSPCOG00000024534) #20 ENSPCOG00000018981 ENSPCOG00000016240 #22 GARRE1 (ENSPCOG00000015972) #23 GPI (ENSPCOG00000021455) #25 PDCD2L (ENSPCOG00000021983) #26 ENSPCOG00000021514 #27 WTIP (ENSPCOG00000013523) #28 ENSPCOG00000015581 #32 ZNF599 (ENSPCOG00000016940) #33 ZNF30 (ENSPCOG00000021909) #35 ZNF792 (ENSPCOG00000025306) #36 GRAMD1A (ENSPCOG00000026599) #37 SCN1B (ENSPCOG00000027522) ENSPCOG00000023042 FXYD3 (ENSPCOG00000021508) LGI4 (ENSPCOG00000024342) FXYD1 (ENSPCOG00000026055) Greater bamboo lemur MODERN SPECIES 124 ENSPSMG00000015080 CBLL1 (ENSPSMG00000015070) SLC26A3 (ENSPSMG00000015024) DLD (ENSPSMG00000014890) LAMB1 (ENSPSMG00000014745) LAMB4 (ENSPSMG00000014698) NRCAM (ENSPSMG00000012972) PNPLA8 (ENSPSMG00000011999) THAP5 (ENSPSMG00000011959) DNAJB9 (ENSPSMG00000011951) ENSPSMG00000011939 BEX4 (ENSPSMG00000011916) ENSPSMG00000011880 NXF3 (ENSPSMG00000011874) ENSPSMG00000011858 ENSPSMG00000011855 #22 Euarchontoglires_A ANCESTRAL SPECIES 7 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 Tree shrew MODERN SPECIES 73 ENSTBEG00000016512 #22 Glires ANCESTRAL SPECIES 6 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 Rodentia DUPLICATION Rodentia DUPLICATION Rodentia ANCESTRAL SPECIES ENSGT00940000154415.z.a #22 Rodentia_A ANCESTRAL SPECIES ENSGT00940000154415.z.a #22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000154415.z.a #22 Naked mole-rat female MODERN SPECIES 2 ENSHGLG00000008798 ENSHGLG00000046472 ENSHGLG00000035032 ENSHGLG00000020347 ENSHGLG00000045715 ENSHGLG00000034169 ENSHGLG00000039595 SLITRK1 (ENSHGLG00000043563) ENSHGLG00000042637 ENSHGLG00000048999 ENSHGLG00000048637 SLITRK6 (ENSHGLG00000000248) SLITRK5 (ENSHGLG00000048548) ENSHGLG00000037714 ENSHGLG00000039195 ENSHGLG00000020258 #22 ENSHGLG00000001464 ENSHGLG00000001081 ENSHGLG00000046381 GPC5 (ENSHGLG00000000656) GPC6 (ENSHGLG00000001128) ENSHGLG00000035827 ENSHGLG00000039074 ENSHGLG00000040422 DCT (ENSHGLG00000001562) TGDS (ENSHGLG00000000360) GPR180 (ENSHGLG00000002152) ENSHGLG00000034930 ENSHGLG00000006878 ENSHGLG00000008312 ENSHGLG00000048406 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000154415.z.a #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000154415.z.a #22 Degu MODERN SPECIES 117 ENSODEG00000010222 ENSODEG00000010094 ATP6V0A2 (ENSODEG00000009400) DNAH10 (ENSODEG00000009996) CCDC92 (ENSODEG00000008834) NCOR2 (ENSODEG00000009536) ENSODEG00000019559 DHX37 (ENSODEG00000009929) AACS (ENSODEG00000008915) ENSODEG00000019612 ENSODEG00000010443 ENSODEG00000009713 ENSODEG00000009816 ENSODEG00000009405 SLC15A4 (ENSODEG00000009561) ENSODEG00000008825 #22 ENSODEG00000019685 PIWIL1 (ENSODEG00000010629) RIMBP2 (ENSODEG00000009979) STX2 (ENSODEG00000009934) ENSODEG00000008349 SFSWAP (ENSODEG00000008020) MMP17 (ENSODEG00000008852) ULK1 (ENSODEG00000008683) PUS1 (ENSODEG00000008248) EP400 (ENSODEG00000008132) DDX51 (ENSODEG00000009622) NOC4L (ENSODEG00000007796) GALNT9 (ENSODEG00000007555) ENSODEG00000007770 P2RX2 (ENSODEG00000008787) Rodentia ANCESTRAL SPECIES 8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00940000154415.z.b #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Rodentia_B ANCESTRAL SPECIES ENSGT00940000154415.z.b #22 Myomorpha ANCESTRAL SPECIES ENSGT00940000154415.z.b #22 Muroidea ANCESTRAL SPECIES ENSGT00940000154415.z.b #22 Muroidea_A ANCESTRAL SPECIES ENSGT00940000154415.z.b #22 Cricetidae ANCESTRAL SPECIES ENSGT00940000154415.z.b #22 Cricetidae_B ANCESTRAL SPECIES ENSGT00940000154415.z.b #22 Northern American deer mouse MODERN SPECIES 18 Ptger1 (ENSPEMG00000027389) Gipc1 (ENSPEMG00000008496) Dnajb1 (ENSPEMG00000007843) Tecr (ENSPEMG00000008519) Ndufb7 (ENSPEMG00000010565) Prmt9 (ENSPEMG00000029675) Or10k2 (ENSPEMG00000027328) Scoc (ENSPEMG00000024835) Clgn (ENSPEMG00000023114) Mgat4d (ENSPEMG00000022918) Elmod2 (ENSPEMG00000028361) Ucp1 (ENSPEMG00000022488) ENSPEMG00000024217 Tbc1d9 (ENSPEMG00000024048) ENSPEMG00000026256 ENSPEMG00000030162 #22 Rnf150 (ENSPEMG00000008599) Zfp330 (ENSPEMG00000022167) Il15 (ENSPEMG00000029894) Inpp4b (ENSPEMG00000005790) Usp38 (ENSPEMG00000017993) Gab1 (ENSPEMG00000011664) Smarca5 (ENSPEMG00000008060) Hhip (ENSPEMG00000020265) ENSPEMG00000027237 Anapc10 (ENSPEMG00000020210) ENSPEMG00000025681 Abce1 (ENSPEMG00000020086) Otud4 (ENSPEMG00000000203) Smad1 (ENSPEMG00000018411) Mmaa (ENSPEMG00000017778) Rodentia_A ANCESTRAL SPECIES ENSGT00940000154415.z.b #22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000154415.z.b #22 Naked mole-rat female MODERN SPECIES 23 SH3PXD2B (ENSHGLG00000009542) NEURL1B (ENSHGLG00000039883) DUSP1 (ENSHGLG00000012633) ERGIC1 (ENSHGLG00000050911) ENSHGLG00000017100 ENSHGLG00000018219 ENSHGLG00000021190 ENSHGLG00000017817 BNIP1 (ENSHGLG00000018031) NKX2-5 (ENSHGLG00000017269) STC2 (ENSHGLG00000017592) ENSHGLG00000041881 CPEB4 (ENSHGLG00000008897) C5orf47 (ENSHGLG00000040572) ENSHGLG00000049916 #22 ENSHGLG00000041184 #22 NSG2 (ENSHGLG00000006062) MSX2 (ENSHGLG00000017569) ENSHGLG00000049074 ENSHGLG00000036934 DRD1 (ENSHGLG00000016781) SFXN1 (ENSHGLG00000045847) HRH2 (ENSHGLG00000018733) CPLX2 (ENSHGLG00000033963) THOC3 (ENSHGLG00000008773) ENSHGLG00000034727 ENSHGLG00000036140 ENSHGLG00000006385 ENSHGLG00000040734 ENSHGLG00000005591 ARL10 (ENSHGLG00000005509) Sciuridae ANCESTRAL SPECIES ENSGT00940000154415.z.b #22 Marmotini ANCESTRAL SPECIES ENSGT00940000154415.z.b #22 Marmotini_b ANCESTRAL SPECIES ENSGT00940000154415.z.b #22 Arctic ground squirrel MODERN SPECIES 86 TDRD12 (ENSUPAG00010010237) #8 SLC7A9 (ENSUPAG00010010354) #9 CEP89 (ENSUPAG00010010410) #10 ENSUPAG00010010487 #11 RHPN2 (ENSUPAG00010010489) #12 GPATCH1 (ENSUPAG00010010496) #13 ENSUPAG00010010526 #14 ENSUPAG00010010532 LRP3 (ENSUPAG00010010534) #15 SLC7A10 (ENSUPAG00010010545) #16 ENSUPAG00010010556 CEBPG (ENSUPAG00010010559) #18 PEPD (ENSUPAG00010010563) #19 CHST8 (ENSUPAG00010010581) #20 KCTD15 (ENSUPAG00010010589) ENSUPAG00010010612 #22 GARRE1 (ENSUPAG00010010624) #23 PDCD2L (ENSUPAG00010010733) #26 UBA2 (ENSUPAG00010010752) #27 WTIP (ENSUPAG00010010767) #28 ENSUPAG00010010772 ENSUPAG00010010775 ENSUPAG00010010792 #32 ZNF599 (ENSUPAG00010010797) #33 ENSUPAG00010010805 ##33 ENSUPAG00010010825 ZNF792 (ENSUPAG00010010828) #36 GRAMD1A (ENSUPAG00010010831) #37 SCN1B (ENSUPAG00010010850) HPN (ENSUPAG00010010859) FXYD3 (ENSUPAG00010010875) Rodentia ANCESTRAL SPECIES 8 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00940000154415.z.b #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b Rodentia_B ANCESTRAL SPECIES 20 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00900000141269 ENSGT00390000009774 ENSGT00940000159953.C #33 ENSGT00950000182858.A.a.b.b ENSGT00950000182858.A.a.b.a ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Kangaroo rat MODERN SPECIES 411 Ankrd27 (ENSDORG00000001832) Rgs9bp (ENSDORG00000015832) ENSDORG00000026153 #7 Tdrd12 (ENSDORG00000012134) #8 Slc7a9 (ENSDORG00000026148) #9 Cep89 (ENSDORG00000013896) #10 Rhpn2 (ENSDORG00000010758) #12 Gpatch1 (ENSDORG00000012546) #13 Lrp3 (ENSDORG00000002320) #15 Slc7a10 (ENSDORG00000002321) #16 Cebpa (ENSDORG00000027904) Cebpg (ENSDORG00000027852) #18 Pepd (ENSDORG00000001950) #19 Chst8 (ENSDORG00000025327) #20 Kctd15 (ENSDORG00000025482) Lsm14a (ENSDORG00000016326) #22 Garre1 (ENSDORG00000012861) #23 Gpi1 (ENSDORG00000009716) #25 Pdcd2l (ENSDORG00000024116) #26 ENSDORG00000008638 ENSDORG00000025989 #28 ENSDORG00000011150 #37 Scn1b (ENSDORG00000011005) Hpn (ENSDORG00000025786) Fxyd3 (ENSDORG00000026248) ENSDORG00000024390 Fxyd1 (ENSDORG00000030165) Fxyd7 (ENSDORG00000019853) ENSDORG00000001949 Lsr (ENSDORG00000011335) Usf2 (ENSDORG00000026323) Myomorpha ANCESTRAL SPECIES 20 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00900000141269 ENSGT00390000009774 ENSGT00940000159953.C #33 ENSGT00950000182858.A.a.b.b ENSGT00950000182858.A.a.b.a ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Muroidea ANCESTRAL SPECIES 18 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00900000141269 ENSGT00390000009774 ENSGT00940000159953.C #33 ENSGT00950000182858.A.a.b.b ENSGT00950000182858.A.a.b.a ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Muroidea_A ANCESTRAL SPECIES 20 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00900000141269 ENSGT00390000009774 ENSGT00940000159953.C #33 ENSGT00950000182858.A.a.b.b ENSGT00950000182858.A.a.b.a ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Cricetidae ANCESTRAL SPECIES 26 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00960000190924 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00900000141269 ENSGT00390000009774 ENSGT00940000159953.C #33 ENSGT00950000182858.A.a.b.b ENSGT00950000182858.A.a.b.a ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Cricetinae ANCESTRAL SPECIES 39 ENSGT00940000153725.a.b.a ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00900000141269 ENSGT00390000009774 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 ENSGT00940000153062.C ENSGT00940000153062.A.b.a ENSGT00990000203831 Chinese hamster chok1gshd MODERN SPECIES 282 Rgs9bp (ENSCGRG00001006642) Nudt19 (ENSCGRG00001017272) #7 Tdrd12 (ENSCGRG00001021407) #8 Slc7a9 (ENSCGRG00001005745) #9 ENSCGRG00001000081 Faap24 (ENSCGRG00001012863) #11 Rhpn2 (ENSCGRG00001013772) #12 Gpatch1 (ENSCGRG00001016736) #13 Lrp3 (ENSCGRG00001000089) #15 Slc7a10 (ENSCGRG00001006085) #16 Cebpa (ENSCGRG00001017833) Cebpg (ENSCGRG00001013623) #18 Pepd (ENSCGRG00001000455) #19 Chst8 (ENSCGRG00001001826) #20 Kctd15 (ENSCGRG00001010841) Lsm14a (ENSCGRG00001015276) #22 Garre1 (ENSCGRG00001014066) #23 GPI (ENSCGRG00001001963) #25 Pdcd2l (ENSCGRG00001019556) #26 Uba2 (ENSCGRG00001001926) #27 Wtip (ENSCGRG00001011000) #28 ENSCGRG00001016534 ENSCGRG00001014673 ENSCGRG00001015621 ENSCGRG00001016204 ENSCGRG00001019961 #33 Gramd1a (ENSCGRG00001020788) #37 Scn1b (ENSCGRG00001019944) Hpn (ENSCGRG00001000276) Fxyd3 (ENSCGRG00001010930) Lgi4 (ENSCGRG00001012988) Golden Hamster MODERN SPECIES 734 Ankrd27 (ENSMAUG00000006822) Rgs9bp (ENSMAUG00000010703) Nudt19 (ENSMAUG00000012791) #7 Tdrd12 (ENSMAUG00000013767) #8 Slc7a9 (ENSMAUG00000016182) #9 Cep89 (ENSMAUG00000010643) #10 Faap24 (ENSMAUG00000015057) #11 Rhpn2 (ENSMAUG00000002669) #12 Lrp3 (ENSMAUG00000022101) #15 Slc7a10 (ENSMAUG00000007653) #16 Cebpa (ENSMAUG00000003660) Cebpg (ENSMAUG00000007633) #18 Pepd (ENSMAUG00000012230) #19 Chst8 (ENSMAUG00000006413) #20 Kctd15 (ENSMAUG00000019883) Lsm14a (ENSMAUG00000011145) #22 Garre1 (ENSMAUG00000016490) #23 Gpi1 (ENSMAUG00000014174) #25 Pdcd2l (ENSMAUG00000008601) #26 Uba2 (ENSMAUG00000006937) #27 Wtip (ENSMAUG00000009707) #28 ENSMAUG00000009920 ENSMAUG00000021853 ENSMAUG00000017020 ENSMAUG00000014474 ENSMAUG00000013091 ENSMAUG00000016376 ENSMAUG00000013656 ENSMAUG00000008100 ENSMAUG00000021884 #37 Scn1b (ENSMAUG00000000604) Cricetidae_B ANCESTRAL SPECIES 25 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00960000190924 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000159953.C #33 ENSGT00950000182858.A.a.b.b ENSGT00950000182858.A.a.b.a ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Northern American deer mouse MODERN SPECIES ENSPEMG00000022578 Tdrd12 (ENSPEMG00000009233) #8 Slc7a9 (ENSPEMG00000020346) #9 Cep89 (ENSPEMG00000020557) #10 Faap24 (ENSPEMG00000021083) #11 Rhpn2 (ENSPEMG00000020482) #12 Gpatch1 (ENSPEMG00000000636) #13 ENSPEMG00000024856 Lrp3 (ENSPEMG00000000320) #15 Slc7a10 (ENSPEMG00000007269) #16 ENSPEMG00000020956 Cebpg (ENSPEMG00000002139) #18 Pepd (ENSPEMG00000021596) #19 Chst8 (ENSPEMG00000020376) #20 Kctd15 (ENSPEMG00000007336) Lsm14a (ENSPEMG00000013718) #22 Garre1 (ENSPEMG00000006373) #23 Gpi1 (ENSPEMG00000013783) #25 Pdcd2l (ENSPEMG00000011448) #26 Uba2 (ENSPEMG00000000201) #27 Wtip (ENSPEMG00000021116) #28 ENSPEMG00000018775 ENSPEMG00000017380 ENSPEMG00000029474 #33 ENSPEMG00000030734 ENSPEMG00000024709 Gramd1a (ENSPEMG00000016850) #37 Scn1b (ENSPEMG00000013209) Hpn (ENSPEMG00000014951) Fxyd3 (ENSPEMG00000012026) Lgi4 (ENSPEMG00000030129) Prairie vole MODERN SPECIES 115 Rgs9bp (ENSMOCG00000002309) Nudt19 (ENSMOCG00000017828) #7 Tdrd12 (ENSMOCG00000002366) #8 Slc7a9 (ENSMOCG00000001789) #9 Cep89 (ENSMOCG00000000261) #10 Faap24 (ENSMOCG00000017357) #11 Rhpn2 (ENSMOCG00000015268) #12 Gpatch1 (ENSMOCG00000000174) #13 Lrp3 (ENSMOCG00000007412) #15 Slc7a10 (ENSMOCG00000020699) #16 ENSMOCG00000001852 Cebpg (ENSMOCG00000008611) #18 Pepd (ENSMOCG00000014173) #19 Chst8 (ENSMOCG00000016140) #20 Kctd15 (ENSMOCG00000007238) Lsm14a (ENSMOCG00000008292) #22 Garre1 (ENSMOCG00000001285) #23 Gpi1 (ENSMOCG00000000495) #25 Pdcd2l (ENSMOCG00000007635) #26 Uba2 (ENSMOCG00000017586) #27 Murinae ANCESTRAL SPECIES 19 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774.e ENSGT00900000141269.i ENSGT00390000009774.f ENSGT00900000141269.j.a ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Mus ANCESTRAL SPECIES ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774.e ENSGT00900000141269.i.a ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 ENSGT00940000153062.C ENSGT00940000153062.A.b.a Mus_A ANCESTRAL SPECIES 1 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774.e.c ENSGT00900000141269.i.a ENSGT00900000141269.j.b.b ENSGT00390000009774.f.a.a ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Mus_B ANCESTRAL SPECIES ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774.e.d ENSGT00390000009774.e.c.b ENSGT00900000141269.i.a ENSGT00390000009774.e.c.a ENSGT00900000141269.i.b ENSGT00390000009774.f.a.b ENSGT00900000141269.j.a.a ENSGT00390000009774.f.b.a.a ENSGT00900000141269.j.b.a Mouse MODERN SPECIES 16 Nudt19 (ENSMUSG00000034875) #7 Tdrd12 (ENSMUSG00000030491) #8 Slc7a9 (ENSMUSG00000030492) #9 Cep89 (ENSMUSG00000023072) #10 Faap24 (ENSMUSG00000030493) #11 Rhpn2 (ENSMUSG00000030494) #12 Gpatch1 (ENSMUSG00000063808) #13 Wdr88 (ENSMUSG00000118454) #14 Lrp3 (ENSMUSG00000001802) #15 Slc7a10 (ENSMUSG00000030495) #16 Cebpa (ENSMUSG00000034957) Cebpg (ENSMUSG00000056216) #18 Pepd (ENSMUSG00000063931) #19 Chst8 (ENSMUSG00000060402) #20 Kctd15 (ENSMUSG00000030499) Lsm14a (ENSMUSG00000066568) #22 Garre1 (ENSMUSG00000066571) #23 Gpi1 (ENSMUSG00000036427) #25 Pdcd2l (ENSMUSG00000002635) #26 Uba2 (ENSMUSG00000052997) #27 Wtip (ENSMUSG00000036459) #28 Scgb1b30 (ENSMUSG00000078752) Scgb1b27 (ENSMUSG00000066583) Scgb2b27 (ENSMUSG00000066584) Scgb2b26 (ENSMUSG00000066586) Scgb1b24 (ENSMUSG00000078753) Scgb2b24 (ENSMUSG00000046438) Scgb2b21 (ENSMUSG00000099900) Scgb1b20 (ENSMUSG00000094978) Scgb2b20 (ENSMUSG00000094305) Scgb1b19 (ENSMUSG00000095232) Mus_C ANCESTRAL SPECIES 32 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774.e.d ENSGT00390000009774.e.c.b ENSGT00900000141269.i.a ENSGT00390000009774.e.c.a ENSGT00900000141269.i.b ENSGT00390000009774.f.a.b ENSGT00900000141269.j.a.a ENSGT00900000141269.j.a.b.b.b ENSGT00390000009774.f.b.a.b Steppe mouse MODERN SPECIES 2649 Chst8 (ENSMSIG00000016709) #20 Kctd15 (ENSMSIG00000016721) Lsm14a (ENSMSIG00000016741) #22 ENSMSIG00000016777 Garre1 (ENSMSIG00000016800) #23 Gpi1 (ENSMSIG00000016861) #25 Pdcd2l (ENSMSIG00000016935) #26 Uba2 (ENSMSIG00000016950) #27 ENSMSIG00000016986 #28 Scgb1b30 (ENSMSIG00000017061) spretus MODERN SPECIES 16 Ankrd27 (MGP_SPRETEiJ_G0030689) Rgs9bp (MGP_SPRETEiJ_G0030688) Tdrd12 (MGP_SPRETEiJ_G0030686) #8 Slc7a9 (MGP_SPRETEiJ_G0030685) #9 Cep89 (MGP_SPRETEiJ_G0030684) #10 Faap24 (MGP_SPRETEiJ_G0030683) #11 Rhpn2 (MGP_SPRETEiJ_G0030682) #12 Gpatch1 (MGP_SPRETEiJ_G0030681) #13 Lrp3 (MGP_SPRETEiJ_G0030680) #15 Slc7a10 (MGP_SPRETEiJ_G0030679) #16 Cebpa (MGP_SPRETEiJ_G0030678) Cebpg (MGP_SPRETEiJ_G0030677) #18 Pepd (MGP_SPRETEiJ_G0030676) #19 Chst8 (MGP_SPRETEiJ_G0030675) #20 Kctd15 (MGP_SPRETEiJ_G0030674) Lsm14a (MGP_SPRETEiJ_G0030673) #22 MGP_SPRETEiJ_G0030672 Garre1 (MGP_SPRETEiJ_G0030671) #23 Gpi1 (MGP_SPRETEiJ_G0030670) #25 Pdcd2l (MGP_SPRETEiJ_G0030669) #26 Uba2 (MGP_SPRETEiJ_G0030668) #27 Wtip (MGP_SPRETEiJ_G0030667) #28 Scgb1b27 (MGP_SPRETEiJ_G0030666) Scgb2b27 (MGP_SPRETEiJ_G0030665) MGP_SPRETEiJ_G0030664 Scgb2b26 (MGP_SPRETEiJ_G0030663) Scgb1b24 (MGP_SPRETEiJ_G0030662) Scgb2b24 (MGP_SPRETEiJ_G0030661) Scgb1b2 (MGP_SPRETEiJ_G0030660) Gramd1a (MGP_SPRETEiJ_G0030659) #37 Scn1b (MGP_SPRETEiJ_G0030658) Ryukyu mouse MODERN SPECIES 16 Rgs9bp (MGP_CAROLIEiJ_G0029589) Nudt19 (MGP_CAROLIEiJ_G0029588) #7 Tdrd12 (MGP_CAROLIEiJ_G0029587) #8 Slc7a9 (MGP_CAROLIEiJ_G0029586) #9 Cep89 (MGP_CAROLIEiJ_G0029585) #10 Faap24 (MGP_CAROLIEiJ_G0029584) #11 Rhpn2 (MGP_CAROLIEiJ_G0029583) #12 Gpatch1 (MGP_CAROLIEiJ_G0029582) #13 Lrp3 (MGP_CAROLIEiJ_G0029581) #15 Slc7a10 (MGP_CAROLIEiJ_G0029580) #16 Cebpa (MGP_CAROLIEiJ_G0029579) Cebpg (MGP_CAROLIEiJ_G0029578) #18 Pepd (MGP_CAROLIEiJ_G0029577) #19 Chst8 (MGP_CAROLIEiJ_G0029576) #20 Kctd15 (MGP_CAROLIEiJ_G0029575) Lsm14a (MGP_CAROLIEiJ_G0029574) #22 MGP_CAROLIEiJ_G0029573 Garre1 (MGP_CAROLIEiJ_G0029572) #23 Gpi1 (MGP_CAROLIEiJ_G0029571) #25 Pdcd2l (MGP_CAROLIEiJ_G0029570) #26 Uba2 (MGP_CAROLIEiJ_G0029569) #27 Wtip (MGP_CAROLIEiJ_G0029568) #28 Scgb1b30 (MGP_CAROLIEiJ_G0029567) MGP_CAROLIEiJ_G0029566 MGP_CAROLIEiJ_G0029565 Scgb1b2 (MGP_CAROLIEiJ_G0029564) Gramd1a (MGP_CAROLIEiJ_G0029563) #37 Scn1b (MGP_CAROLIEiJ_G0029562) Hpn (MGP_CAROLIEiJ_G0029561) Fxyd3 (MGP_CAROLIEiJ_G0029560) Lgi4 (MGP_CAROLIEiJ_G0029559) Shrew mouse MODERN SPECIES Rgs9bp (MGP_PahariEiJ_G0012823) Nudt19 (MGP_PahariEiJ_G0012822) #7 Tdrd12 (MGP_PahariEiJ_G0012821) #8 Slc7a9 (MGP_PahariEiJ_G0012820) #9 Cep89 (MGP_PahariEiJ_G0012819) #10 Faap24 (MGP_PahariEiJ_G0012818) #11 Rhpn2 (MGP_PahariEiJ_G0012817) #12 Gpatch1 (MGP_PahariEiJ_G0012816) #13 Lrp3 (MGP_PahariEiJ_G0012815) #15 Slc7a10 (MGP_PahariEiJ_G0012814) #16 Cebpa (MGP_PahariEiJ_G0012813) Cebpg (MGP_PahariEiJ_G0012812) #18 Pepd (MGP_PahariEiJ_G0012811) #19 Chst8 (MGP_PahariEiJ_G0012810) #20 Kctd15 (MGP_PahariEiJ_G0012809) MGP_PahariEiJ_G0012808 #22 Garre1 (MGP_PahariEiJ_G0012807) #23 Gpi1 (MGP_PahariEiJ_G0012806) #25 Pdcd2l (MGP_PahariEiJ_G0012805) #26 Uba2 (MGP_PahariEiJ_G0012804) #27 Wtip (MGP_PahariEiJ_G0012803) #28 MGP_PahariEiJ_G0012802 MGP_PahariEiJ_G0012801 MGP_PahariEiJ_G0012800 MGP_PahariEiJ_G0012799 MGP_PahariEiJ_G0012798 MGP_PahariEiJ_G0012797 Scgb2b3 (MGP_PahariEiJ_G0012796) Gramd1a (MGP_PahariEiJ_G0012795) #37 Scn1b (MGP_PahariEiJ_G0012794) Hpn (MGP_PahariEiJ_G0012793) Rat MODERN SPECIES AC136661.1 (ENSRNOG00000037380) Tdrd12 (ENSRNOG00000012719) #8 Slc7a9 (ENSRNOG00000012344) #9 Cep89 (ENSRNOG00000012140) #10 Faap24 (ENSRNOG00000022393) #11 Rhpn2 (ENSRNOG00000011885) #12 Snrpg (ENSRNOG00000032232) Gpatch1 (ENSRNOG00000011584) #13 Wdr88 (ENSRNOG00000037393) #14 Lrp3 (ENSRNOG00000011451) #15 Slc7a10 (ENSRNOG00000010938) #16 Cebpg (ENSRNOG00000021144) #18 AABR07002969.1 (ENSRNOG00000052945) #19 RGD1560088 (ENSRNOG00000062485) Kctd15 (ENSRNOG00000021137) Lsm14a (ENSRNOG00000021133) #22 Garre1 (ENSRNOG00000021129) #23 Gpi (ENSRNOG00000023150) #25 Pdcd2l (ENSRNOG00000021119) #26 Uba2 (ENSRNOG00000021113) #27 Wtip (ENSRNOG00000023296) #28 Scgb1b30 (ENSRNOG00000062949) ENSRNOG00000063830 Scgb1b24 (ENSRNOG00000069356) Scgb2b24 (ENSRNOG00000023314) Scgb2b2 (ENSRNOG00000023367) Apbh (ENSRNOG00000064903) RGD1563307 (ENSRNOG00000069776) RGD1561430 (ENSRNOG00000069798) Gramd1a (ENSRNOG00000021106) #37 Scn1b (ENSRNOG00000021102) Upper Galilee mountains blind mole rat MODERN SPECIES 1067 Nudt19 (ENSNGAG00000019145) #7 Tdrd12 (ENSNGAG00000000793) #8 Slc7a9 (ENSNGAG00000009688) #9 Cep89 (ENSNGAG00000007623) #10 Faap24 (ENSNGAG00000005467) #11 Rhpn2 (ENSNGAG00000003058) #12 ENSNGAG00000017534 Gpatch1 (ENSNGAG00000012455) #13 Lrp3 (ENSNGAG00000010395) #15 Slc7a10 (ENSNGAG00000009565) #16 Cebpa (ENSNGAG00000002763) Cebpg (ENSNGAG00000007539) #18 Pepd (ENSNGAG00000006312) #19 Chst8 (ENSNGAG00000004945) #20 Kctd15 (ENSNGAG00000002842) Lsm14a (ENSNGAG00000001821) #22 Garre1 (ENSNGAG00000010117) #23 Gpi1 (ENSNGAG00000001274) #25 Pdcd2l (ENSNGAG00000023943) #26 Uba2 (ENSNGAG00000023751) #27 Wtip (ENSNGAG00000017394) #28 ENSNGAG00000018363 #32 Lesser Egyptian jerboa MODERN SPECIES 73 Ankrd27 (ENSJJAG00000016506) Rgs9bp (ENSJJAG00000012886) ENSJJAG00000018149 #8 Slc7a9 (ENSJJAG00000014613) #9 Cep89 (ENSJJAG00000024207) #10 ENSJJAG00000012680 #11 Rhpn2 (ENSJJAG00000001747) #12 Gpatch1 (ENSJJAG00000023765) #13 Lrp3 (ENSJJAG00000017356) #15 Slc7a10 (ENSJJAG00000006090) #16 ENSJJAG00000014105 Cebpg (ENSJJAG00000009499) #18 Pepd (ENSJJAG00000018036) #19 Chst8 (ENSJJAG00000023483) #20 Kctd15 (ENSJJAG00000015923) Lsm14a (ENSJJAG00000017413) #22 Garre1 (ENSJJAG00000002378) #23 Gpi1 (ENSJJAG00000007082) #25 Pdcd2l (ENSJJAG00000002931) #26 ENSJJAG00000000682 #27 Wtip (ENSJJAG00000015388) #28 ENSJJAG00000014992 ENSJJAG00000020022 Zfp420 (ENSJJAG00000013496) Zfp383 (ENSJJAG00000017985) ENSJJAG00000011181 ENSJJAG00000017393 Zfp568 (ENSJJAG00000019062) Zfp14 (ENSJJAG00000001077) Zfp566 (ENSJJAG00000015026) ENSJJAG00000011001 Rodentia_A ANCESTRAL SPECIES 6 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Hystricomorpha ANCESTRAL SPECIES 2 ENSGT00940000161100 ENSGT00390000002748 ENSGT00390000016319 ENSGT00390000005702 ENSGT00940000161496 ENSGT00940000162716 ENSGT00940000160881 ENSGT00940000156204 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00900000141269 ENSGT00390000009774 ENSGT00950000182890.B.b.i.a ENSGT00940000162928.k #36 ENSGT00940000162928.l #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 20 KMT2B (ENSHGLG00000015062) ENSHGLG00000050908 ZBTB32 (ENSHGLG00000015654) UPK1A (ENSHGLG00000015606) ENSHGLG00000015135 ENSHGLG00000015213 #15 ENSHGLG00000015188 #16 ENSHGLG00000013022 CEBPA (ENSHGLG00000043594) ENSHGLG00000004838 ENSHGLG00000041808 #18 PEPD (ENSHGLG00000011240) #19 CHST8 (ENSHGLG00000008720) #20 KCTD15 (ENSHGLG00000034885) ENSHGLG00000042419 ENSHGLG00000007321 #22 GARRE1 (ENSHGLG00000013898) #23 Gpi (ENSHGLG00000015058) #25 PDCD2L (ENSHGLG00000019039) #26 UBA2 (ENSHGLG00000013209) #27 WTIP (ENSHGLG00000044055) #28 ENSHGLG00000013473 ENSHGLG00000037952 ENSHGLG00000041394 ENSHGLG00000044339 ENSHGLG00000009826 #32 ZNF599 (ENSHGLG00000047822) #33 ENSHGLG00000013668 ENSHGLG00000006199 ENSHGLG00000041073 ENSHGLG00000010197 #36 Naked mole-rat female MODERN SPECIES 2 ENSHGLG00000018786 KL (ENSHGLG00000005334) ENSHGLG00000006974 PDS5B (ENSHGLG00000006670) ENSHGLG00000018160 ENSHGLG00000039341 N4BP2L1 (ENSHGLG00000006971) BRCA2 (ENSHGLG00000008590) ZAR1L (ENSHGLG00000006253) ENSHGLG00000041019 ENSHGLG00000009415 ENSHGLG00000036768 ENSHGLG00000009276 ENSHGLG00000002160 ENSHGLG00000006352 ENSHGLG00000018220 #22 ENSHGLG00000047678 ENSHGLG00000013471 ENSHGLG00000039932 HSPH1 (ENSHGLG00000006908) TEX26 (ENSHGLG00000018916) MEDAG (ENSHGLG00000037818) ALOX5AP (ENSHGLG00000013689) USPL1 (ENSHGLG00000036213) ENSHGLG00000003352 KATNAL1 (ENSHGLG00000003538) UBL3 (ENSHGLG00000040587) ENSHGLG00000033244 ENSHGLG00000019220 ENSHGLG00000013589 ENSHGLG00000012383 Naked mole-rat female MODERN SPECIES 23 UBTD2 (ENSHGLG00000044520) SH3PXD2B (ENSHGLG00000009542) NEURL1B (ENSHGLG00000039883) DUSP1 (ENSHGLG00000012633) ERGIC1 (ENSHGLG00000050911) ENSHGLG00000017100 ENSHGLG00000018219 ENSHGLG00000021190 ENSHGLG00000017817 BNIP1 (ENSHGLG00000018031) NKX2-5 (ENSHGLG00000017269) STC2 (ENSHGLG00000017592) ENSHGLG00000041881 CPEB4 (ENSHGLG00000008897) C5orf47 (ENSHGLG00000040572) ENSHGLG00000049916 #22 ENSHGLG00000041184 #22 NSG2 (ENSHGLG00000006062) MSX2 (ENSHGLG00000017569) ENSHGLG00000049074 ENSHGLG00000036934 DRD1 (ENSHGLG00000016781) SFXN1 (ENSHGLG00000045847) HRH2 (ENSHGLG00000018733) CPLX2 (ENSHGLG00000033963) THOC3 (ENSHGLG00000008773) ENSHGLG00000034727 ENSHGLG00000036140 ENSHGLG00000006385 ENSHGLG00000040734 ENSHGLG00000005591 Naked mole-rat female MODERN SPECIES 8 ENSHGLG00000041415 ENSHGLG00000000792 ENSHGLG00000036390 ENSHGLG00000032896 ENSHGLG00000000750 ENSHGLG00000000765 YEATS4 (ENSHGLG00000005930) ENSHGLG00000020270 FRS2 (ENSHGLG00000004690) ENSHGLG00000008737 ENSHGLG00000032589 BEST3 (ENSHGLG00000005639) ENSHGLG00000033107 ENSHGLG00000015773 ENSHGLG00000016095 ENSHGLG00000012413 #22 ENSHGLG00000008390 ENSHGLG00000039489 ENSHGLG00000004965 PTPRB (ENSHGLG00000017872) ENSHGLG00000035838 PTPRR (ENSHGLG00000005019) ENSHGLG00000048295 TSPAN8 (ENSHGLG00000009287) LGR5 (ENSHGLG00000004903) ZFC3H1 (ENSHGLG00000014297) ENSHGLG00000040461 ENSHGLG00000012561 ENSHGLG00000012420 ENSHGLG00000032222 TBC1D15 (ENSHGLG00000012156) Hystricomorpha_a ANCESTRAL SPECIES 11 ENSGT00390000001986 ENSGT00940000161100 ENSGT00390000002748 ENSGT00390000016319 ENSGT00390000005702 ENSGT00940000161496 ENSGT00940000160881 ENSGT00940000156204 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00900000141269 ENSGT00390000009774 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00950000182890.B.b.i.a ENSGT00940000162928.k #36 ENSGT00940000162928.l #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 Hystricomorpha_b ANCESTRAL SPECIES 8 ENSGT00940000155110 ENSGT00390000001986 ENSGT00940000161100 ENSGT00390000002748 ENSGT00390000016319 ENSGT00940000161496 ENSGT00940000160881 ENSGT00940000156204 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00900000141269 ENSGT00390000009774 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00950000182890.B.b.i.a ENSGT00940000162928.k #36 ENSGT00940000162928.l #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 175 PROSER3 (ENSCLAG00000011579) HSPB6 (ENSCLAG00000010884) LIN37 (ENSCLAG00000011722) PSENEN (ENSCLAG00000014972) KMT2B (ENSCLAG00000012114) ENSCLAG00000014824 UPK1A (ENSCLAG00000013579) COX6B1 (ENSCLAG00000014823) LRP3 (ENSCLAG00000011669) #15 SLC7A10 (ENSCLAG00000015288) #16 CEBPA (ENSCLAG00000010794) CEBPG (ENSCLAG00000011142) #18 PEPD (ENSCLAG00000013269) #19 CHST8 (ENSCLAG00000014258) #20 KCTD15 (ENSCLAG00000013292) ENSCLAG00000012837 #22 GARRE1 (ENSCLAG00000015049) #23 GPI (ENSCLAG00000015986) #25 PDCD2L (ENSCLAG00000015773) #26 UBA2 (ENSCLAG00000014260) #27 WTIP (ENSCLAG00000011080) #28 ENSCLAG00000011327 ENSCLAG00000013337 ENSCLAG00000015812 #32 ZNF599 (ENSCLAG00000015514) #33 ENSCLAG00000012457 ENSCLAG00000015294 #36 ENSCLAG00000014971 #36 GRAMD1A (ENSCLAG00000016126) #37 SCN1B (ENSCLAG00000014191) HPN (ENSCLAG00000013336) Long-tailed chinchilla MODERN SPECIES 160 CHRND (ENSCLAG00000014396) CHRNG (ENSCLAG00000008928) EIF4E2 (ENSCLAG00000008745) ENSCLAG00000008295 KCNJ13 (ENSCLAG00000006955) GIGYF2 (ENSCLAG00000009747) SNORC (ENSCLAG00000010644) NGEF (ENSCLAG00000016466) NEU2 (ENSCLAG00000012674) INPP5D (ENSCLAG00000015629) ATG16L1 (ENSCLAG00000010328) SAG (ENSCLAG00000009439) DGKD (ENSCLAG00000011641) USP40 (ENSCLAG00000008763) ENSCLAG00000011557 ENSCLAG00000014326 #22 ENSCLAG00000011830 MROH2A (ENSCLAG00000016264) HJURP (ENSCLAG00000012207) TRPM8 (ENSCLAG00000013665) SPP2 (ENSCLAG00000016002) ARL4C (ENSCLAG00000010525) SH3BP4 (ENSCLAG00000009544) AGAP1 (ENSCLAG00000015901) GBX2 (ENSCLAG00000008221) ENSCLAG00000007670 IQCA1 (ENSCLAG00000008889) ACKR3 (ENSCLAG00000008658) Degu MODERN SPECIES 124 HSPB6 (ENSODEG00000016136) LIN37 (ENSODEG00000015303) PSENEN (ENSODEG00000015490) KMT2B (ENSODEG00000014424) ENSODEG00000014837 UPK1A (ENSODEG00000014934) COX6B1 (ENSODEG00000014806) ENSODEG00000020284 LRP3 (ENSODEG00000015710) #15 SLC7A10 (ENSODEG00000014633) #16 PEPD (ENSODEG00000014789) #19 CHST8 (ENSODEG00000014339) #20 KCTD15 (ENSODEG00000014330) ENSODEG00000020231 ENSODEG00000020314 LSM14A (ENSODEG00000014352) #22 GARRE1 (ENSODEG00000014705) #23 GPI (ENSODEG00000014778) #25 PDCD2L (ENSODEG00000016213) #26 ENSODEG00000015301 WTIP (ENSODEG00000015801) #28 ENSODEG00000015943 ENSODEG00000015444 ENSODEG00000014251 #37 SCN1B (ENSODEG00000015355) HPN (ENSODEG00000014955) FXYD3 (ENSODEG00000014504) LGI4 (ENSODEG00000014287) FXYD1 (ENSODEG00000014043) ENSODEG00000015329 ENSODEG00000014231 Guinea pig MODERN SPECIES 52 ARHGAP33 (ENSCPOG00000019450) HSPB6 (ENSCPOG00000032854) LIN37 (ENSCPOG00000003730) PSENEN (ENSCPOG00000035743) IGFLR1 (ENSCPOG00000003725) KMT2B (ENSCPOG00000003718) ENSCPOG00000030326 UPK1A (ENSCPOG00000003519) COX6B1 (ENSCPOG00000040146) LRP3 (ENSCPOG00000013712) #15 SLC7A10 (ENSCPOG00000040440) #16 ENSCPOG00000023297 PEPD (ENSCPOG00000014494) #19 CHST8 (ENSCPOG00000000793) #20 KCTD15 (ENSCPOG00000040268) LSM14A (ENSCPOG00000025803) #22 GARRE1 (ENSCPOG00000027055) #23 GPI (ENSCPOG00000008562) #25 PDCD2L (ENSCPOG00000006016) #26 UBA2 (ENSCPOG00000010543) #27 WTIP (ENSCPOG00000036934) #28 ENSCPOG00000030617 ZNF8 (ENSCPOG00000031529) RPS5 (ENSCPOG00000023995) ZNF584 (ENSCPOG00000031428) ENSCPOG00000021589 ENSCPOG00000039862 ZNF446 (ENSCPOG00000032178) SLC27A5 (ENSCPOG00000012620) ZBTB45 (ENSCPOG00000021221) ENSCPOG00000005745 Sciuridae DUPLICATION Sciuridae ANCESTRAL SPECIES 5 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676.g #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b.e #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00950000182858.A.a.b.b ENSGT00950000182858.A.a.b.a ENSGT00940000162062 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 Marmotini ANCESTRAL SPECIES 7 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676.g #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b.e #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Alpin marmot MODERN SPECIES 45 NUDT19 (ENSMMMG00000007175) #7 TDRD12 (ENSMMMG00000007074) #8 SLC7A9 (ENSMMMG00000007036) #9 CEP89 (ENSMMMG00000006832) #10 FAAP24 (ENSMMMG00000006814) #11 RHPN2 (ENSMMMG00000006785) #12 GPATCH1 (ENSMMMG00000006748) #13 ENSMMMG00000006739 #14 LRP3 (ENSMMMG00000006727) #15 SLC7A10 (ENSMMMG00000006705) #16 ENSMMMG00000006703 ENSMMMG00000006690 #18 PEPD (ENSMMMG00000006673) #19 CHST8 (ENSMMMG00000006659) #20 KCTD15 (ENSMMMG00000006641) ENSMMMG00000006622 #22 GARRE1 (ENSMMMG00000006560) #23 GPI (ENSMMMG00000006534) #25 ENSMMMG00000006505 ENSMMMG00000006484 #28 ENSMMMG00000006427 ENSMMMG00000006408 ENSMMMG00000006393 #32 ZNF599 (ENSMMMG00000006387) #33 ZNF30 (ENSMMMG00000006356) #35 ZNF792 (ENSMMMG00000006349) #36 GRAMD1A (ENSMMMG00000006322) #37 HPN (ENSMMMG00000006299) FXYD3 (ENSMMMG00000006287) LGI4 (ENSMMMG00000006277) FXYD1 (ENSMMMG00000006217) Marmotini_b ANCESTRAL SPECIES 50 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676.g #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415.`b.e #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Squirrel MODERN SPECIES 170 ANKRD27 (ENSSTOG00000013613) RGS9BP (ENSSTOG00000027616) ENSSTOG00000031724 #7 TDRD12 (ENSSTOG00000013638) #8 SLC7A9 (ENSSTOG00000013674) #9 CEP89 (ENSSTOG00000019373) #10 RHPN2 (ENSSTOG00000002103) #12 GPATCH1 (ENSSTOG00000003720) #13 LRP3 (ENSSTOG00000009443) #15 SLC7A10 (ENSSTOG00000009450) #16 ENSSTOG00000027963 CEBPG (ENSSTOG00000007596) #18 PEPD (ENSSTOG00000007602) #19 CHST8 (ENSSTOG00000007349) #20 KCTD15 (ENSSTOG00000006412) LSM14A (ENSSTOG00000002785) #22 GARRE1 (ENSSTOG00000002560) #23 GPI (ENSSTOG00000002576) #25 PDCD2L (ENSSTOG00000002593) #26 UBA2 (ENSSTOG00000002605) #27 WTIP (ENSSTOG00000021248) #28 ENSSTOG00000020391 ENSSTOG00000034011 ENSSTOG00000003480 #32 ZNF599 (ENSSTOG00000034913) #33 ZNF792 (ENSSTOG00000031445) #36 GRAMD1A (ENSSTOG00000003968) #37 SCN1B (ENSSTOG00000022359) HPN (ENSSTOG00000028691) FXYD3 (ENSSTOG00000011416) LGI4 (ENSSTOG00000011421) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 8 NUDT19 (ENSSVLG00005021230) #7 TDRD12 (ENSSVLG00005021333) #8 SLC7A9 (ENSSVLG00005021851) #9 CEP89 (ENSSVLG00005021928) #10 ENSSVLG00005021973 #11 RHPN2 (ENSSVLG00005022031) #12 GPATCH1 (ENSSVLG00005022166) #13 WDR88 (ENSSVLG00005022304) #14 LRP3 (ENSSVLG00005022405) #15 SLC7A10 (ENSSVLG00005022473) #16 CEBPA (ENSSVLG00005022560) CEBPG (ENSSVLG00005022576) #18 PEPD (ENSSVLG00005022623) #19 CHST8 (ENSSVLG00005022924) #20 KCTD15 (ENSSVLG00005022944) ENSSVLG00005023009 #22 GARRE1 (ENSSVLG00005023064) #23 GPI (ENSSVLG00005023120) #25 PDCD2L (ENSSVLG00005023151) #26 ENSSVLG00005023196 #27 WTIP (ENSSVLG00005023294) #28 ENSSVLG00005023328 ENSSVLG00005023382 ENSSVLG00005023418 ENSSVLG00005023438 ENSSVLG00005023461 ZNF599 (ENSSVLG00005023484) #33 ENSSVLG00005023560 ENSSVLG00005023573 ENSSVLG00005023600 ENSSVLG00005023627 Eurasian red squirrel MODERN SPECIES 1 TFDP2 (ENSSVLG00005008716) ENSSVLG00005008823 GK5 (ENSSVLG00005008881) XRN1 (ENSSVLG00005009003) ATR (ENSSVLG00005009179) PLS1 (ENSSVLG00005009713) ENSSVLG00005009814 TRPC1 (ENSSVLG00005009874) ENSSVLG00005009949 PCOLCE2 (ENSSVLG00005009992) PAQR9 (ENSSVLG00005010124) U2SURP (ENSSVLG00005010214) CHST2 (ENSSVLG00005011831) SLC9A9 (ENSSVLG00005011865) DIPK2A (ENSSVLG00005011903) ENSSVLG00005011980 #22 PLOD2 (ENSSVLG00005012138) PLSCR4 (ENSSVLG00005012337) ENSSVLG00005012558 PLSCR1 (ENSSVLG00005012636) PLSCR5 (ENSSVLG00005012728) ZIC4 (ENSSVLG00005012907) ZIC1 (ENSSVLG00005013067) ENSSVLG00005013147 AGTR1 (ENSSVLG00005013217) CPB1 (ENSSVLG00005013271) CPA3 (ENSSVLG00005013362) GYG1 (ENSSVLG00005013712) HLTF (ENSSVLG00005013865) HPS3 (ENSSVLG00005014027) CP (ENSSVLG00005014272) Sciuridae ANCESTRAL SPECIES 34 ENSGT00940000155454 ENSGT00940000155219 ENSGT00480000042679.b.b ENSGT00390000013700 ENSGT00950000186331 ENSGT00940000157039.b ENSGT00390000013956 ENSGT00940000155175.A ENSGT00940000156877 ENSGT00950000183174.B.b ENSGT00390000011709 ENSGT00390000006601 ENSGT00940000158106 ENSGT00940000153313.B ENSGT01070000253816.a.a.b ENSGT00940000154415.`b.f #22 ENSGT00940000154512.a ENSGT00390000013820 ENSGT00940000159907 ENSGT00390000006788.a.b ENSGT00390000005130 ENSGT00390000000693 ENSGT00940000162467.b ENSGT00940000159144.B ENSGT00390000003758 ENSGT00390000012569.b ENSGT00940000159552 ENSGT00390000016051.u.b ENSGT00390000006051.b.f ENSGT00390000006051.a.b.a.a ENSGT00940000158961 Marmotini ANCESTRAL SPECIES ENSGT00940000154415.`b.f #22 Alpin marmot MODERN SPECIES 13 PCDH8 (ENSMMMG00000000439) CNMD (ENSMMMG00000000405) SUGT1 (ENSMMMG00000000341) ENSMMMG00000000315 ELF1 (ENSMMMG00000000224) ENSMMMG00000000196 WBP4 (ENSMMMG00000000179) KBTBD7 (ENSMMMG00000000126) MTRF1 (ENSMMMG00000000091) NAA16 (ENSMMMG00000000060) RGCC (ENSMMMG00000023619) VWA8 (ENSMMMG00000023535) DGKH (ENSMMMG00000023481) AKAP11 (ENSMMMG00000023475) TNFSF11 (ENSMMMG00000023474) ENSMMMG00000023473 #22 EPSTI1 (ENSMMMG00000023471) ENOX1 (ENSMMMG00000023468) ENSMMMG00000023467 CCDC122 (ENSMMMG00000023465) LACC1 (ENSMMMG00000023463) TSC22D1 (ENSMMMG00000023448) NUFIP1 (ENSMMMG00000023439) ENSMMMG00000023437 ENSMMMG00000023435 KCTD4 (ENSMMMG00000023434) ENSMMMG00000023432 ENSMMMG00000023427 SLC25A30 (ENSMMMG00000023425) COG3 (ENSMMMG00000023415) CBY2 (ENSMMMG00000023405) Marmotini_b ANCESTRAL SPECIES ENSGT00940000154415.`b.f #22 Arctic ground squirrel MODERN SPECIES 719 AKAP11 (ENSUPAG00010011214) TNFSF11 (ENSUPAG00010011256) ENSUPAG00010011270 #22 Eurasian red squirrel MODERN SPECIES 13 OLFM4 (ENSSVLG00005004306) PCDH8 (ENSSVLG00005004344) CNMD (ENSSVLG00005004380) SUGT1 (ENSSVLG00005004421) ENSSVLG00005004459 ELF1 (ENSSVLG00005004493) WBP4 (ENSSVLG00005004520) ENSSVLG00005004557 ENSSVLG00005004565 NAA16 (ENSSVLG00005004585) RGCC (ENSSVLG00005004637) VWA8 (ENSSVLG00005004690) DGKH (ENSSVLG00005000391) AKAP11 (ENSSVLG00005000468) TNFSF11 (ENSSVLG00005000540) ENSSVLG00005000585 #22 FAM216B (ENSSVLG00005000610) EPSTI1 (ENSSVLG00005000671) DNAJC15 (ENSSVLG00005000749) ENOX1 (ENSSVLG00005000776) CCDC122 (ENSSVLG00005000800) LACC1 (ENSSVLG00005000824) SERP2 (ENSSVLG00005000867) TSC22D1 (ENSSVLG00005000900) NUFIP1 (ENSSVLG00005000955) ENSSVLG00005000987 ENSSVLG00005001012 ENSSVLG00005001028 ENSSVLG00005001046 KCTD4 (ENSSVLG00005001062) ENSSVLG00005001090 Lagomorpha ANCESTRAL SPECIES 121 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 Pika MODERN SPECIES 5496 ENSOPRG00000003647 LSM14A (ENSOPRG00000003652) #22 ENSOPRG00000018661 GARRE1 (ENSOPRG00000003678) #23 ENSOPRG00000003729 #25 Rabbit DUPLICATION Rabbit MODERN SPECIES 7 SMYD3 (ENSOCUG00000008229) KIF26B (ENSOCUG00000008220) EFCAB2 (ENSOCUG00000029593) HNRNPU (ENSOCUG00000014469) ENSOCUG00000039107 ENSOCUG00000023897 ENSOCUG00000038233 ENSOCUG00000033583 DESI2 (ENSOCUG00000012551) CATSPERE (ENSOCUG00000012540) ENSOCUG00000017531 ADSS2 (ENSOCUG00000013982) C1orf100 (ENSOCUG00000030082) ZBTB18 (ENSOCUG00000007968) AKT3 (ENSOCUG00000015901) ENSOCUG00000037452 #22 SDCCAG8 (ENSOCUG00000015881) CEP170 (ENSOCUG00000000173) PLD5 (ENSOCUG00000009192) ENSOCUG00000034818 ENSOCUG00000027414 BECN2 (ENSOCUG00000017468) ENSOCUG00000007716 ENSOCUG00000025961 ENSOCUG00000028015 GPR137B (ENSOCUG00000012779) ERO1B (ENSOCUG00000012789) EDARADD (ENSOCUG00000022288) ENSOCUG00000025911 LGALS8 (ENSOCUG00000013996) HEATR1 (ENSOCUG00000014007) Rabbit DUPLICATION Rabbit MODERN SPECIES 16 CAPN12 (ENSOCUG00000023100) ENSOCUG00000026629 TDRD12 (ENSOCUG00000016911) #8 SLC7A9 (ENSOCUG00000005496) #9 CEP89 (ENSOCUG00000015870) #10 FAAP24 (ENSOCUG00000015883) #11 RHPN2 (ENSOCUG00000015891) #12 GPATCH1 (ENSOCUG00000015905) #13 WDR88 (ENSOCUG00000029028) #14 LRP3 (ENSOCUG00000009440) #15 SLC7A10 (ENSOCUG00000009443) #16 CEBPA (ENSOCUG00000022985) CEBPG (ENSOCUG00000017036) #18 PEPD (ENSOCUG00000017042) #19 KCTD15 (ENSOCUG00000010531) ENSOCUG00000011872 #22 FKBP2 (ENSOCUG00000025678) GARRE1 (ENSOCUG00000002236) #23 GPI (ENSOCUG00000001455) #25 UBA2 (ENSOCUG00000001464) #27 ENSOCUG00000004364 ENSOCUG00000023470 ENSOCUG00000024882 TOX3 (ENSOCUG00000001546) ENSOCUG00000031625 ENSOCUG00000038351 ENSOCUG00000001016 RBL2 (ENSOCUG00000006354) AKTIP (ENSOCUG00000002885) RPGRIP1L (ENSOCUG00000001738) FTO (ENSOCUG00000001741) Rabbit MODERN SPECIES 506 ENSOCUG00000024157 ENSOCUG00000039341 ENSOCUG00000032430 ENSOCUG00000034034 ENSOCUG00000004348 ENSOCUG00000029259 ENSOCUG00000024089 #22 ENSOCUG00000036702 ORYCUNV1R1510 (ENSOCUG00000034811) ENSOCUG00000031281 ENSOCUG00000029998 ENSOCUG00000029349 ENSOCUG00000035369 Laurasiatheria ANCESTRAL SPECIES 5 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00940000169413 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00940000171246 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000154415 #22 Hedgehog MODERN SPECIES 865 LSM14A (ENSEEUG00000015699) #22 Common shrew MODERN SPECIES 470 LSM14A (ENSSARG00000004338) #22 Laurasiatheria_a ANCESTRAL SPECIES 5 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00940000169413 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000153593.c.b ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00940000171246 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 Artiodactyla ANCESTRAL SPECIES 5 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000153593.c.b ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Suina ANCESTRAL SPECIES 2 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Pig MODERN SPECIES 14 NUDT19 (ENSSSCG00000036294) #7 TDRD12 (ENSSSCG00000002857) #8 SLC7A9 (ENSSSCG00000022948) #9 CEP89 (ENSSSCG00000025152) #10 FAAP24 (ENSSSCG00000040905) #11 RHPN2 (ENSSSCG00000022312) #12 GPATCH1 (ENSSSCG00000002865) #13 WDR88 (ENSSSCG00000002862) #14 LRP3 (ENSSSCG00000002863) #15 SLC7A10 (ENSSSCG00000002864) #16 CEBPA (ENSSSCG00000002866) CEBPG (ENSSSCG00000002867) #18 PEPD (ENSSSCG00000002868) #19 CHST8 (ENSSSCG00000035222) #20 KCTD15 (ENSSSCG00000033695) LSM14A (ENSSSCG00000002869) #22 GARRE1 (ENSSSCG00000002872) #23 GPI (ENSSSCG00000002873) #25 PDCD2L (ENSSSCG00000002875) #26 ENSSSCG00000031169 WTIP (ENSSSCG00000039166) #28 ENSSSCG00000062729 ENSSSCG00000054487 ZNF599 (ENSSSCG00000035876) #33 ENSSSCG00000002877 #32 ENSSSCG00000054422 ENSSSCG00000056413 ZNF792 (ENSSSCG00000036886) #36 GRAMD1A (ENSSSCG00000002879) #37 SCN1B (ENSSSCG00000023267) HPN (ENSSSCG00000021867) Chacoan peccary MODERN SPECIES 104 ENSCWAG00000001479 TDRD12 (ENSCWAG00000001230) #8 SLC7A9 (ENSCWAG00000001135) #9 CEP89 (ENSCWAG00000001114) #10 FAAP24 (ENSCWAG00000001092) #11 RHPN2 (ENSCWAG00000001061) #12 GPATCH1 (ENSCWAG00000001016) #13 WDR88 (ENSCWAG00000000990) #14 LRP3 (ENSCWAG00000000977) #15 SLC7A10 (ENSCWAG00000000952) #16 CEBPA (ENSCWAG00000000938) CEBPG (ENSCWAG00000000927) #18 PEPD (ENSCWAG00000000872) #19 CHST8 (ENSCWAG00000000843) #20 KCTD15 (ENSCWAG00000000807) LSM14A (ENSCWAG00000000775) #22 GARRE1 (ENSCWAG00000000734) #23 GPI (ENSCWAG00000000613) #25 PDCD2L (ENSCWAG00000000574) #26 UBA2 (ENSCWAG00000000541) #27 WTIP (ENSCWAG00000000518) #28 ENSCWAG00000000495 ENSCWAG00000000475 #32 ZNF599 (ENSCWAG00000000435) #33 ZNF792 (ENSCWAG00000000402) #36 GRAMD1A (ENSCWAG00000000235) #37 SCN1B (ENSCWAG00000000154) HPN (ENSCWAG00000000108) FXYD3 (ENSCWAG00000000022) LGI4 (ENSCWAG00000007422) FXYD1 (ENSCWAG00000007379) Artiodactyla_a ANCESTRAL SPECIES 4 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000153593.c.b ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Camelidae ANCESTRAL SPECIES 9 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000153593.c.b ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Arabian camel MODERN SPECIES 35 TDRD12 (ENSCDRG00005020226) #8 SLC7A9 (ENSCDRG00005019910) #9 CEP89 (ENSCDRG00005019493) #10 FAAP24 (ENSCDRG00005019258) #11 RHPN2 (ENSCDRG00005019052) #12 GPATCH1 (ENSCDRG00005018715) #13 ENSCDRG00005018548 #14 LRP3 (ENSCDRG00005018325) #15 SLC7A10 (ENSCDRG00005018085) #16 CEBPA (ENSCDRG00005017974) CEBPG (ENSCDRG00005017885) #18 PEPD (ENSCDRG00005017266) #19 CHST8 (ENSCDRG00005016814) #20 KCTD15 (ENSCDRG00005016516) ENSCDRG00005016335 LSM14A (ENSCDRG00005015883) #22 GARRE1 (ENSCDRG00005015403) #23 GPI (ENSCDRG00005015064) #25 PDCD2L (ENSCDRG00005014775) #26 UBA2 (ENSCDRG00005014360) #27 ENSCDRG00005014244 WTIP (ENSCDRG00005014097) #28 ENSCDRG00005013890 ENSCDRG00005013802 ENSCDRG00005013626 ENSCDRG00005013282 #32 ZNF599 (ENSCDRG00005012866) #33 ENSCDRG00005012543 ENSCDRG00005012360 ENSCDRG00005012136 ENSCDRG00005012029 Alpaca MODERN SPECIES 244 LSM14A (ENSVPAG00000002736) #22 ENSVPAG00000002738 #25 Artiodactyla_b ANCESTRAL SPECIES 4 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Cetacea ANCESTRAL SPECIES 6 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00940000153997.b.a.b.h ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Odontoceti ANCESTRAL SPECIES 6 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00940000153997.b.a.b.h ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Odontoceti_a ANCESTRAL SPECIES 7 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 ENSGT00940000153062.C Dolphin MODERN SPECIES 3257 LSM14A (ENSTTRG00000012875) #22 GARRE1 (ENSTTRG00000012891) #23 GPI (ENSTTRG00000012903) #25 PDCD2L (ENSTTRG00000012915) #26 UBA2 (ENSTTRG00000012917) #27 ENSTTRG00000012922 #28 Odontoceti_b ANCESTRAL SPECIES 5 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 ENSGT00940000153062.C Monodontidae ANCESTRAL SPECIES 3 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 ENSGT00940000153062.C Narwhal MODERN SPECIES 296 SLC7A9 (ENSMMNG00015001863) #9 ENSMMNG00015001894 CEP89 (ENSMMNG00015001947) #10 ENSMMNG00015002056 FAAP24 (ENSMMNG00015002077) #11 RHPN2 (ENSMMNG00015002110) #12 GPATCH1 (ENSMMNG00015002182) #13 WDR88 (ENSMMNG00015002263) #14 LRP3 (ENSMMNG00015002346) #15 SLC7A10 (ENSMMNG00015002412) #16 CEBPA (ENSMMNG00015002491) CEBPG (ENSMMNG00015002501) #18 PEPD (ENSMMNG00015002556) #19 CHST8 (ENSMMNG00015002618) #20 KCTD15 (ENSMMNG00015002648) LSM14A (ENSMMNG00015002709) #22 GARRE1 (ENSMMNG00015002783) #23 GPI (ENSMMNG00015002821) #25 PDCD2L (ENSMMNG00015002881) #26 UBA2 (ENSMMNG00015002907) #27 WTIP (ENSMMNG00015003047) #28 ENSMMNG00015003104 #32 ZNF599 (ENSMMNG00015003127) #33 ENSMMNG00015003143 #35 ZNF792 (ENSMMNG00015003174) #36 GRAMD1A (ENSMMNG00015003255) #37 SCN1B (ENSMMNG00015003340) HPN (ENSMMNG00015003403) FXYD3 (ENSMMNG00015003472) LGI4 (ENSMMNG00015003585) FXYD1 (ENSMMNG00015003614) Beluga whale MODERN SPECIES 14 ENSDLEG00000001110 SLC7A9 (ENSDLEG00000001083) #9 ENSDLEG00000001076 CEP89 (ENSDLEG00000001045) #10 FAAP24 (ENSDLEG00000001028) #11 RHPN2 (ENSDLEG00000000997) #12 GPATCH1 (ENSDLEG00000000964) #13 ENSDLEG00000000950 #14 LRP3 (ENSDLEG00000000916) #15 SLC7A10 (ENSDLEG00000000869) #16 CEBPA (ENSDLEG00000000849) CEBPG (ENSDLEG00000000840) #18 PEPD (ENSDLEG00000000825) #19 CHST8 (ENSDLEG00000000815) #20 KCTD15 (ENSDLEG00000000790) LSM14A (ENSDLEG00000000703) #22 KIAA0355 (ENSDLEG00000000627) #23 GPI (ENSDLEG00000000552) #25 PDCD2L (ENSDLEG00000000532) #26 UBA2 (ENSDLEG00000000485) #27 WTIP (ENSDLEG00000000436) #28 ENSDLEG00000000415 ENSDLEG00000000364 #32 ZNF599 (ENSDLEG00000000306) #33 ZNF792 (ENSDLEG00000000284) #36 GRAMD1A (ENSDLEG00000000229) #37 SCN1B (ENSDLEG00000000146) HPN (ENSDLEG00000000101) FXYD3 (ENSDLEG00000000061) LGI4 (ENSDLEG00000003187) ENSDLEG00000003169 Vaquita MODERN SPECIES 10 TDRD12 (ENSPSNG00000020182) #8 SLC7A9 (ENSPSNG00000020070) #9 ENSPSNG00000020046 CEP89 (ENSPSNG00000019994) #10 FAAP24 (ENSPSNG00000019954) #11 RHPN2 (ENSPSNG00000019928) #12 GPATCH1 (ENSPSNG00000019894) #13 WDR88 (ENSPSNG00000019754) #14 LRP3 (ENSPSNG00000019712) #15 SLC7A10 (ENSPSNG00000019639) #16 CEBPA (ENSPSNG00000019621) CEBPG (ENSPSNG00000019601) #18 PEPD (ENSPSNG00000019536) #19 CHST8 (ENSPSNG00000019495) #20 KCTD15 (ENSPSNG00000019455) LSM14A (ENSPSNG00000019322) #22 GARRE1 (ENSPSNG00000019202) #23 GPI (ENSPSNG00000018917) #25 PDCD2L (ENSPSNG00000018857) #26 UBA2 (ENSPSNG00000018804) #27 WTIP (ENSPSNG00000018772) #28 ENSPSNG00000018747 ENSPSNG00000018702 #32 ZNF599 (ENSPSNG00000018646) #33 ENSPSNG00000018603 #35 ZNF792 (ENSPSNG00000018552) #36 GRAMD1A (ENSPSNG00000018279) #37 SCN1B (ENSPSNG00000018171) HPN (ENSPSNG00000018059) FXYD3 (ENSPSNG00000017932) LGI4 (ENSPSNG00000017852) Sperm whale MODERN SPECIES 8 SLC7A9 (ENSPCTG00005015420) #9 CEP89 (ENSPCTG00005015339) #10 FAAP24 (ENSPCTG00005015251) #11 ENSPCTG00005015197 RHPN2 (ENSPCTG00005014981) #12 GPATCH1 (ENSPCTG00005014911) #13 WDR88 (ENSPCTG00005014581) #14 LRP3 (ENSPCTG00005014474) #15 SLC7A10 (ENSPCTG00005014353) #16 CEBPA (ENSPCTG00005014331) CEBPG (ENSPCTG00005014307) #18 PEPD (ENSPCTG00005014153) #19 CHST8 (ENSPCTG00005014071) #20 KCTD15 (ENSPCTG00005013999) ENSPCTG00005013917 LSM14A (ENSPCTG00005013769) #22 ENSPCTG00005013668 KIAA0355 (ENSPCTG00005013477) #23 GPI (ENSPCTG00005013183) #25 PDCD2L (ENSPCTG00005013093) #26 UBA2 (ENSPCTG00005012969) #27 WTIP (ENSPCTG00005012867) #28 ENSPCTG00005012698 #32 ZNF599 (ENSPCTG00005012568) #33 ZNF792 (ENSPCTG00005012349) #36 NOVA2 (ENSPCTG00005012295) HIF3A (ENSPCTG00005011738) CCDC8 (ENSPCTG00005011665) ENSPCTG00005011609 STRN4 (ENSPCTG00005011583) ARHGAP35 (ENSPCTG00005011530) Blue whale MODERN SPECIES 10 ENSBMSG00010017925 SLC7A9 (ENSBMSG00010017871) #9 CEP89 (ENSBMSG00010017830) #10 FAAP24 (ENSBMSG00010017784) #11 RHPN2 (ENSBMSG00010017698) #12 GPATCH1 (ENSBMSG00010017658) #13 WDR88 (ENSBMSG00010017527) #14 LRP3 (ENSBMSG00010017500) #15 SLC7A10 (ENSBMSG00010017456) #16 CEBPA (ENSBMSG00010017438) CEBPG (ENSBMSG00010017424) #18 PEPD (ENSBMSG00010017360) #19 CHST8 (ENSBMSG00010017297) #20 KCTD15 (ENSBMSG00010017250) ENSBMSG00010017224 LSM14A (ENSBMSG00010017133) #22 ENSBMSG00010017069 GARRE1 (ENSBMSG00010016980) #23 GPI (ENSBMSG00010016879) #25 PDCD2L (ENSBMSG00010016845) #26 UBA2 (ENSBMSG00010016801) #27 WTIP (ENSBMSG00010016752) #28 ENSBMSG00010016710 ENSBMSG00010016681 #32 ZNF599 (ENSBMSG00010016641) #33 ENSBMSG00010016620 #35 ZNF792 (ENSBMSG00010016578) #36 GRAMD1A (ENSBMSG00010016467) #37 SCN1B (ENSBMSG00010016409) HPN (ENSBMSG00010016282) ENSBMSG00010016213 Pecora ANCESTRAL SPECIES 4 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774.b.b.a ENSGT00900000141269.c.b.a ENSGT00390000009774.b.b.b.a.b ENSGT00390000009774.b.b.b.b.b ENSGT00900000141269.d ENSGT00390000009774.b.b.b.a.a.b ENSGT00900000141269.c.b.b.b ENSGT00390000009774.b.b.b.a.a.a ENSGT00900000141269.c.b.b.a ENSGT00390000009774.b.b.b.b.a Percora_a ANCESTRAL SPECIES 4 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000154509.y.b.a.a.b ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774.b.b.b.a.a.b ENSGT00900000141269.c.b.a ENSGT00390000009774.b.b.b.b.b ENSGT00900000141269.d ENSGT00900000141269.c.b.b.b ENSGT00390000009774.b.b.b.a.a.a ENSGT00900000141269.c.b.b.a ENSGT00390000009774.b.b.b.b.a.a.a ENSGT00900000141269.c.a.a.b ENSGT00390000009774.b.a Bovidae ANCESTRAL SPECIES 4 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000154509.y.b.a.a.b ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774.b.b.b.a.a.b ENSGT00900000141269.c.b.a ENSGT00390000009774.b.b.b.b.b ENSGT00900000141269.d ENSGT00900000141269.c.b.b.b ENSGT00390000009774.b.b.b.a.a.a ENSGT00900000141269.c.b.b.a ENSGT00390000009774.b.b.b.b.a.a.a ENSGT00900000141269.c.a.a.b ENSGT00390000009774.b.a Bovinae ANCESTRAL SPECIES 3 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000154509.y.b.a.a.b ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774.b.b.b.a.a.b.a ENSGT00900000141269.c.b.a ENSGT00390000009774.b.b.b.a.b ENSGT00390000009774.b.b.b.b.b ENSGT00900000141269.d ENSGT00390000009774.b.b.b.a.a.b.b ENSGT00900000141269.c.b.b.b ENSGT00390000009774.b.b.b.a.a.a ENSGT00900000141269.c.b.b.a ENSGT00390000009774.b.b.b.b.a.a.a Bos ANCESTRAL SPECIES 4 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000154509.y.b.a.a.b ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774.b.b.b.a.a.b.a ENSGT00900000141269.c.b.a ENSGT00390000009774.b.b.b.a.b ENSGT00390000009774.b.b.b.b.b ENSGT00900000141269.d ENSGT00900000141269.c.b.b.b ENSGT00390000009774.b.b.b.a.a.a.a.a ENSGT00900000141269.c.b.b.a ENSGT00390000009774.b.b.b.b.a.a.a ENSGT00900000141269.c.a.a.b Bos_a ANCESTRAL SPECIES 1 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000154509.y.b.a.a.b ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00900000141269.c.b.a ENSGT00390000009774.a ENSGT00390000009774.b.a ENSGT00900000141269.c.a.a.a ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00980000199360 ENSGT00950000182858.A.a.b ENSGT00940000162928 #36 ENSGT00940000162930 Domestic yak MODERN SPECIES 12 SLC7A9 (ENSBGRG00000014100) #9 CEP89 (ENSBGRG00000013711) #10 FAAP24 (ENSBGRG00000013456) #11 ENSBGRG00000013384 RHPN2 (ENSBGRG00000013257) #12 GPATCH1 (ENSBGRG00000012937) #13 WDR88 (ENSBGRG00000012742) #14 LRP3 (ENSBGRG00000012595) #15 SLC7A10 (ENSBGRG00000012434) #16 ENSBGRG00000012424 ENSBGRG00000012376 CEBPG (ENSBGRG00000012352) #18 PEPD (ENSBGRG00000011874) #19 CHST8 (ENSBGRG00000011805) #20 KCTD15 (ENSBGRG00000011698) LSM14A (ENSBGRG00000011045) #22 GARRE1 (ENSBGRG00000010861) #23 GPI (ENSBGRG00000022167) #25 PDCD2L (ENSBGRG00000022086) #26 ENSBGRG00000022026 #27 WTIP (ENSBGRG00000021906) #28 ENSBGRG00000021883 ENSBGRG00000021783 ENSBGRG00000021728 ENSBGRG00000021684 ENSBGRG00000021636 ENSBGRG00000021609 ENSBGRG00000021563 ENSBGRG00000021528 ENSBGRG00000021504 Wild yak MODERN SPECIES 2146 LSM14A (ENSBMUG00000000362) #22 GARRE1 (ENSBMUG00000022721) #23 GPI (ENSBMUG00000022708) #25 PDCD2L (ENSBMUG00000022690) #26 UBA2 (ENSBMUG00000022678) #27 WTIP (ENSBMUG00000022655) #28 ENSBMUG00000022649 ENSBMUG00000022632 ENSBMUG00000022620 ENSBMUG00000022611 Bos_b ANCESTRAL SPECIES ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00940000154509.y.b.a.a.b ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774.b.b.b.a.a.b.a ENSGT00900000141269.c.b.a ENSGT00390000009774.b.b.b.a.b ENSGT00390000009774.b.b.b.b.b ENSGT00900000141269.d ENSGT00900000141269.c.b.b.b ENSGT00390000009774.b.b.b.a.a.a.a.a ENSGT00900000141269.c.b.b.a ENSGT00390000009774.b.b.b.a.a.a.a.b ENSGT00900000141269.c.a.a.b Cow MODERN SPECIES 9 NUDT19 (ENSBTAG00000023614) #7 ENSBTAG00000049809 TDRD12 (ENSBTAG00000019266) #8 SLC7A9 (ENSBTAG00000013338) #9 CEP89 (ENSBTAG00000004864) #10 FAAP24 (ENSBTAG00000010403) #11 RHPN2 (ENSBTAG00000003089) #12 ENSBTAG00000049582 GPATCH1 (ENSBTAG00000000721) #13 WDR88 (ENSBTAG00000031810) #14 LRP3 (ENSBTAG00000047062) #15 SLC7A10 (ENSBTAG00000046544) #16 PEPD (ENSBTAG00000031941) #19 CHST8 (ENSBTAG00000047670) #20 KCTD15 (ENSBTAG00000017956) LSM14A (ENSBTAG00000000630) #22 GARRE1 (ENSBTAG00000013175) #23 GPI (ENSBTAG00000006396) #25 PDCD2L (ENSBTAG00000002571) #26 UBA2 (ENSBTAG00000002573) #27 WTIP (ENSBTAG00000007841) #28 ENSBTAG00000049041 ENSBTAG00000050865 ENSBTAG00000050987 ENSBTAG00000050882 ENSBTAG00000051319 ENSBTAG00000045737 ENSBTAG00000052946 ENSBTAG00000047571 ENSBTAG00000047724 ENSBTAG00000052142 Hybrid Bos Indicus MODERN SPECIES 9 TDRD12 (ENSBIXG00005028317) #8 SLC7A9 (ENSBIXG00005004880) #9 CEP89 (ENSBIXG00005028440) #10 FAAP24 (ENSBIXG00005002469) #11 ENSBIXG00005028497 RHPN2 (ENSBIXG00005004919) #12 GPATCH1 (ENSBIXG00005028563) #13 WDR88 (ENSBIXG00005028616) #14 LRP3 (ENSBIXG00005004954) #15 SLC7A10 (ENSBIXG00005028713) #16 CEBPA (ENSBIXG00005028726) CEBPG (ENSBIXG00005028763) #18 PEPD (ENSBIXG00005005052) #19 CHST8 (ENSBIXG00005002179) #20 KCTD15 (ENSBIXG00005002102) LSM14A (ENSBIXG00005001998) #22 GARRE1 (ENSBIXG00005001883) #23 GPI (ENSBIXG00005029128) #25 PDCD2L (ENSBIXG00005029138) #26 UBA2 (ENSBIXG00005001815) #27 WTIP (ENSBIXG00005029189) #28 ENSBIXG00005001583 ENSBIXG00005029292 ENSBIXG00005029283 ENSBIXG00005029273 ENSBIXG00005007859 ENSBIXG00005007863 ENSBIXG00005007872 ENSBIXG00005007883 ENSBIXG00005007887 ENSBIXG00005000024 #32 American bison MODERN SPECIES 3196 ENSBBBG00000010478 #7 ENSBBBG00000010472 SLC7A9 (ENSBBBG00000010461) #9 CEP89 (ENSBBBG00000007585) #10 FAAP24 (ENSBBBG00000010419) #11 RHPN2 (ENSBBBG00000010413) #12 ENSBBBG00000010409 GPATCH1 (ENSBBBG00000010401) #13 WDR88 (ENSBBBG00000007393) #14 LRP3 (ENSBBBG00000010366) #15 SLC7A10 (ENSBBBG00000010361) #16 CEBPG (ENSBBBG00000025507) #18 PEPD (ENSBBBG00000025444) #19 CHST8 (ENSBBBG00000008256) #20 KCTD15 (ENSBBBG00000025236) LSM14A (ENSBBBG00000025168) #22 GARRE1 (ENSBBBG00000025060) #23 GPI (ENSBBBG00000007742) #25 PDCD2L (ENSBBBG00000006587) #26 ENSBBBG00000008057 UBA2 (ENSBBBG00000024928) #27 ENSBBBG00000008227 #28 ENSBBBG00000024846 ENSBBBG00000006815 ENSBBBG00000024791 ENSBBBG00000024777 ENSBBBG00000024762 ENSBBBG00000006502 ENSBBBG00000007812 ENSBBBG00000006491 ENSBBBG00000000162 #32 Caprinae ANCESTRAL SPECIES 4 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00940000154550.a.e.a.a.a.a ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774.b.b.a.b ENSGT00900000141269.c.b.a ENSGT00390000009774.b.b.b.b.a.a.b ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00980000199360 ENSGT00950000182858.A.a.b ENSGT00940000162928 #36 ENSGT00940000161007 #37 Rambouillet Sheep MODERN SPECIES 5 NUDT19 (ENSOARG00020018292) #7 TDRD12 (ENSOARG00020010036) #8 SLC7A9 (ENSOARG00020010886) #9 CEP89 (ENSOARG00020010986) #10 FAAP24 (ENSOARG00020011075) #11 RHPN2 (ENSOARG00020011137) #12 GPATCH1 (ENSOARG00020011298) #13 ENSOARG00020011383 #14 LRP3 (ENSOARG00020011439) #15 SLC7A10 (ENSOARG00020011600) #16 CEBPA (ENSOARG00020011732) CEBPG (ENSOARG00020011763) #18 PEPD (ENSOARG00020011799) #19 CHST8 (ENSOARG00020011976) #20 ENSOARG00020012005 LSM14A (ENSOARG00020012188) #22 ENSOARG00020012563 GARRE1 (ENSOARG00020012589) #23 GPI (ENSOARG00020012688) #25 PDCD2L (ENSOARG00020012872) #26 UBA2 (ENSOARG00020012991) #27 WTIP (ENSOARG00020013317) #28 ENSOARG00020013478 ENSOARG00020013551 ENSOARG00020013647 ENSOARG00020013716 ENSOARG00020013766 ENSOARG00020013836 ENSOARG00020013900 ENSOARG00020013969 ENSOARG00020014025 Goat MODERN SPECIES 9 ANKRD27 (ENSCHIG00000017376) RGS9BP (ENSCHIG00000007331) NUDT19 (ENSCHIG00000021537) #7 CEP89 (ENSCHIG00000014142) #10 FAAP24 (ENSCHIG00000021119) #11 RHPN2 (ENSCHIG00000010158) #12 ENSCHIG00000023853 GPATCH1 (ENSCHIG00000019626) #13 LRP3 (ENSCHIG00000012481) #15 SLC7A10 (ENSCHIG00000023717) #16 CEBPA (ENSCHIG00000011587) CEBPG (ENSCHIG00000008784) #18 PEPD (ENSCHIG00000015514) #19 CHST8 (ENSCHIG00000019583) #20 KCTD15 (ENSCHIG00000023579) LSM14A (ENSCHIG00000009458) #22 ENSCHIG00000008709 GARRE1 (ENSCHIG00000007746) #23 GPI (ENSCHIG00000016122) #25 PDCD2L (ENSCHIG00000024774) #26 UBA2 (ENSCHIG00000014051) #27 WTIP (ENSCHIG00000025695) #28 ENSCHIG00000011644 ENSCHIG00000022635 ENSCHIG00000013055 ENSCHIG00000024732 ENSCHIG00000009298 ENSCHIG00000021338 ENSCHIG00000014055 #32 ZNF599 (ENSCHIG00000025528) #33 ENSCHIG00000013449 Siberian musk deer MODERN SPECIES 125 TDRD12 (ENSMMSG00000001219) #8 SLC7A9 (ENSMMSG00000001076) #9 CEP89 (ENSMMSG00000001009) #10 FAAP24 (ENSMMSG00000000974) #11 ENSMMSG00000000960 RHPN2 (ENSMMSG00000000908) #12 GPATCH1 (ENSMMSG00000000877) #13 WDR88 (ENSMMSG00000000832) #14 LRP3 (ENSMMSG00000000798) #15 SLC7A10 (ENSMMSG00000000765) #16 CEBPA (ENSMMSG00000000749) CEBPG (ENSMMSG00000000734) #18 PEPD (ENSMMSG00000000671) #19 CHST8 (ENSMMSG00000000640) #20 KCTD15 (ENSMMSG00000000610) LSM14A (ENSMMSG00000000531) #22 ENSMMSG00000000453 #23 GPI (ENSMMSG00000000382) #25 PDCD2L (ENSMMSG00000000346) #26 UBA2 (ENSMMSG00000000281) #27 ENSMMSG00000000225 #28 ENSMMSG00000000209 ENSMMSG00000000199 ENSMMSG00000000187 ENSMMSG00000000175 ENSMMSG00000003766 Yarkand deer DUPLICATION Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 10 COLQ (ENSCHYG00000011149) HACL1 (ENSCHYG00000011632) ENSCHYG00000014376 BTD (ENSCHYG00000014404) ANKRD28 (ENSCHYG00000014677) GALNT15 (ENSCHYG00000016130) DPH3 (ENSCHYG00000016462) OXNAD1 (ENSCHYG00000016543) RFTN1 (ENSCHYG00000016683) ENSCHYG00000017075 PLCL2 (ENSCHYG00000017252) TBC1D5 (ENSCHYG00000017550) SATB1 (ENSCHYG00000017752) ENSCHYG00000017861 KCNH8 (ENSCHYG00000017889) ENSCHYG00000017953 #22 EFHB (ENSCHYG00000017996) RAB5A (ENSCHYG00000018319) PP2D1 (ENSCHYG00000018405) KAT2B (ENSCHYG00000018554) SGO1 (ENSCHYG00000021407) ENSCHYG00000021440 ZNF596 (ENSCHYG00000021476) ENSCHYG00000021566 ATG3 (ENSCHYG00000021648) SLC35A5 (ENSCHYG00000021840) CCDC80 (ENSCHYG00000021936) ENSCHYG00000022314 GTPBP8 (ENSCHYG00000022401) NEPRO (ENSCHYG00000022540) ENSCHYG00000022701 Yarkand deer MODERN SPECIES 28 SDS (ENSCHYG00000000646) SDSL (ENSCHYG00000000665) LHX5 (ENSCHYG00000000682) ENSCHYG00000000696 RBM19 (ENSCHYG00000000734) TBX5 (ENSCHYG00000000797) TBX3 (ENSCHYG00000000836) ENSCHYG00000000868 MED13L (ENSCHYG00000000917) ENSCHYG00000001041 ENSCHYG00000001079 ENSCHYG00000001144 ENSCHYG00000001301 HRK (ENSCHYG00000001314) TESC (ENSCHYG00000001343) ENSCHYG00000001393 #22 FBXO21 (ENSCHYG00000001435) NOS1 (ENSCHYG00000001525) KSR2 (ENSCHYG00000001636) ENSCHYG00000001686 WSB2 (ENSCHYG00000001732) ENSCHYG00000001776 ENSCHYG00000001803 TAOK3 (ENSCHYG00000001860) ENSCHYG00000001934 SRRM4 (ENSCHYG00000001953) HSPB8 (ENSCHYG00000001963) CCDC60 (ENSCHYG00000002012) ENSCHYG00000002119 TMEM233 (ENSCHYG00000002138) PRKAB1 (ENSCHYG00000002156) Yarkand deer MODERN SPECIES 27 NUDT19 (ENSCHYG00000007216) #7 TDRD12 (ENSCHYG00000007254) #8 SLC7A9 (ENSCHYG00000007447) #9 CEP89 (ENSCHYG00000007507) #10 FAAP24 (ENSCHYG00000007619) #11 RHPN2 (ENSCHYG00000007660) #12 GPATCH1 (ENSCHYG00000007727) #13 ENSCHYG00000007774 #14 LRP3 (ENSCHYG00000007799) #15 SLC7A10 (ENSCHYG00000007871) #16 CEBPA (ENSCHYG00000007953) CEBPG (ENSCHYG00000007966) #18 PEPD (ENSCHYG00000008012) #19 CHST8 (ENSCHYG00000008167) #20 KCTD15 (ENSCHYG00000008196) LSM14A (ENSCHYG00000008291) #22 GARRE1 (ENSCHYG00000008545) #23 GPI (ENSCHYG00000008603) #25 PDCD2L (ENSCHYG00000008656) #26 ENSCHYG00000008732 #27 WTIP (ENSCHYG00000009038) #28 ENSCHYG00000009182 ENSCHYG00000009241 ENSCHYG00000009305 ENSCHYG00000009345 ENSCHYG00000009417 ENSCHYG00000009446 ENSCHYG00000009500 ENSCHYG00000009548 ENSCHYG00000009601 ENSCHYG00000009635 Laurasiatheria_b ANCESTRAL SPECIES 5 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00940000169413 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000153593.c.b ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00940000171246 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000163677.a.a.d.a.a.a ENSGT00940000161007 #37 ENSGT00390000018560.a.b Laurasiatheria_c ANCESTRAL SPECIES 4 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000153593.c.b ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000163677.a.a.d.a.a.a ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000165494 ENSGT00940000153062.A.a.a.a Chiroptera ANCESTRAL SPECIES 46 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000153593.c.b ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000165494 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 ENSGT00940000153062.C Microchiroptera ANCESTRAL SPECIES 12 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000153593.c.b ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 ENSGT00940000153062.C ENSGT00940000153062.A.b.a Microbat DUPLICATION Microbat DUPLICATION Microbat DUPLICATION Microbat MODERN SPECIES 985 ENSMLUG00000022253 GABRA4 (ENSMLUG00000006648) COX7B2 (ENSMLUG00000029805) GABRA2 (ENSMLUG00000011304) GABRG1 (ENSMLUG00000012175) ENSMLUG00000030735 GNPDA2 (ENSMLUG00000011288) GUF1 (ENSMLUG00000002116) YIPF7 (ENSMLUG00000007205) KCTD8 (ENSMLUG00000010892) ENSMLUG00000009520 #22 ENSMLUG00000029519 GRXCR1 (ENSMLUG00000024049) ATP8A1 (ENSMLUG00000007793) ENSMLUG00000026182 BEND4 (ENSMLUG00000002615) SLC30A9 (ENSMLUG00000002605) TMEM33 (ENSMLUG00000006119) PHOX2B (ENSMLUG00000028989) ENSMLUG00000009300 UCHL1 (ENSMLUG00000010138) APBB2 (ENSMLUG00000004853) NSUN7 (ENSMLUG00000004843) RBM47 (ENSMLUG00000000889) CHRNA9 (ENSMLUG00000000893) RHOH (ENSMLUG00000000899) Microbat MODERN SPECIES 942 ITGA4 (ENSMLUG00000014215) UBE2E3 (ENSMLUG00000014945) ENSMLUG00000024453 ENSMLUG00000030576 ENSMLUG00000013437 ZNF385B (ENSMLUG00000013424) SESTD1 (ENSMLUG00000005032) ENSMLUG00000027856 ENSMLUG00000005976 TTN (ENSMLUG00000005832) ENSMLUG00000024664 PLEKHA3 (ENSMLUG00000005823) FKBP7 (ENSMLUG00000005816) PJVK (ENSMLUG00000005814) ENSMLUG00000005810 ENSMLUG00000022423 #22 OSBPL6 (ENSMLUG00000005787) RBM45 (ENSMLUG00000005782) PDE11A (ENSMLUG00000005135) ENSMLUG00000028755 ENSMLUG00000005133 ENSMLUG00000005126 AGPS (ENSMLUG00000005113) ENSMLUG00000025480 NFE2L2 (ENSMLUG00000003909) ENSMLUG00000003906 MTX2 (ENSMLUG00000015966) ENSMLUG00000029447 HOXD3 (ENSMLUG00000012510) HOXD4 (ENSMLUG00000012508) HOXD8 (ENSMLUG00000028864) Microbat MODERN SPECIES 946 C12orf50 (ENSMLUG00000011631) ENSMLUG00000011652 CEP290 (ENSMLUG00000011675) TMTC3 (ENSMLUG00000014827) ENSMLUG00000003683 KITLG (ENSMLUG00000001777) ENSMLUG00000029765 DUSP6 (ENSMLUG00000002881) POC1B (ENSMLUG00000002893) ENSMLUG00000009601 ATP2B1 (ENSMLUG00000017233) EPYC (ENSMLUG00000007680) KERA (ENSMLUG00000007698) LUM (ENSMLUG00000007704) DCN (ENSMLUG00000000100) ENSMLUG00000027841 #22 ENSMLUG00000028663 BTG1 (ENSMLUG00000017492) ENSMLUG00000026108 ENSMLUG00000023018 ENSMLUG00000001417 EEA1 (ENSMLUG00000003482) ENSMLUG00000022858 ENSMLUG00000002767 ENSMLUG00000009982 ENSMLUG00000027351 SOCS2 (ENSMLUG00000015422) ENSMLUG00000016455 ENSMLUG00000000436 Microbat MODERN SPECIES 1101 ANKRD27 (ENSMLUG00000007152) RGS9BP (ENSMLUG00000007196) NUDT19 (ENSMLUG00000024776) #7 TDRD12 (ENSMLUG00000010694) #8 SLC7A9 (ENSMLUG00000010760) #9 CEP89 (ENSMLUG00000013276) #10 FAAP24 (ENSMLUG00000013287) #11 RHPN2 (ENSMLUG00000013292) #12 GPATCH1 (ENSMLUG00000012161) #13 WDR88 (ENSMLUG00000012176) #14 LRP3 (ENSMLUG00000012184) #15 SLC7A10 (ENSMLUG00000012196) #16 CEBPG (ENSMLUG00000005181) #18 PEPD (ENSMLUG00000005184) #19 KCTD15 (ENSMLUG00000003373) ENSMLUG00000003368 #22 GARRE1 (ENSMLUG00000015793) #23 ENSMLUG00000003037 #25 PDCD2L (ENSMLUG00000008184) #26 ENSMLUG00000003047 #27 WTIP (ENSMLUG00000025957) #28 ENSMLUG00000012994 ENSMLUG00000024232 ENSMLUG00000026253 ENSMLUG00000024907 NLGN1 (ENSMLUG00000003810) ENSMLUG00000024388 Greater horseshoe bat MODERN SPECIES 6 NUDT19 (ENSRFEG00010005577) #7 SLC7A9 (ENSRFEG00010005658) #9 CEP89 (ENSRFEG00010005716) #10 FAAP24 (ENSRFEG00010005778) #11 RHPN2 (ENSRFEG00010005821) #12 ENSRFEG00010005895 #13 LRP3 (ENSRFEG00010006084) #15 SLC7A10 (ENSRFEG00010006133) #16 CEBPA (ENSRFEG00010006198) CEBPG (ENSRFEG00010006215) #18 PEPD (ENSRFEG00010006273) #19 CHST8 (ENSRFEG00010006394) #20 ENSRFEG00010006421 KCTD15 (ENSRFEG00010006447) ENSRFEG00010006482 LSM14A (ENSRFEG00010006525) #22 GARRE1 (ENSRFEG00010006652) #23 GPI (ENSRFEG00010006768) #25 PDCD2L (ENSRFEG00010006934) #26 UBA2 (ENSRFEG00010007015) #27 WTIP (ENSRFEG00010007122) #28 ENSRFEG00010007187 #32 ZNF599 (ENSRFEG00010007314) #33 ZNF792 (ENSRFEG00010007468) #36 GRAMD1A (ENSRFEG00010007531) #37 SCN1B (ENSRFEG00010007928) HPN (ENSRFEG00010008034) FXYD3 (ENSRFEG00010008134) LGI4 (ENSRFEG00010008235) ENSRFEG00010008312 ENSRFEG00010008463 Megabat MODERN SPECIES 7165 LSM14A (ENSPVAG00000015035) #22 Equus ANCESTRAL SPECIES 1 ENSGT00940000156370 #9 ENSGT00940000158965.a.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000166016 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00900000141269 ENSGT00390000009774 ENSGT00950000182890.B.b ENSGT00950000183169.B ENSGT00940000161431 #32 ENSGT00940000163677.a.a.c.b ENSGT00940000159953.C #33 ENSGT00950000182858.A.a.b.k ENSGT00940000164353 #35 ENSGT00940000162928 #36 Donkey MODERN SPECIES 18 SLC7A9 (ENSEASG00005021090) #9 ENSEASG00005021086 CEP89 (ENSEASG00005021099) #10 FAAP24 (ENSEASG00005025311) #11 RHPN2 (ENSEASG00005021118) #12 GPATCH1 (ENSEASG00005021162) #13 WDR88 (ENSEASG00005021235) #14 LRP3 (ENSEASG00005021238) #15 SLC7A10 (ENSEASG00005021240) #16 CEBPA (ENSEASG00005026752) ENSEASG00005033109 PEPD (ENSEASG00005021249) #19 CHST8 (ENSEASG00005021257) #20 KCTD15 (ENSEASG00005036137) ENSEASG00005031823 LSM14A (ENSEASG00005021263) #22 GARRE1 (ENSEASG00005021267) #23 GPI (ENSEASG00005021280) #25 PDCD2L (ENSEASG00005021344) #26 UBA2 (ENSEASG00005021350) #27 WTIP (ENSEASG00005027894) #28 ENSEASG00005031323 ENSEASG00005026657 ENSEASG00005027305 ENSEASG00005036122 ENSEASG00005025067 #32 ZNF599 (ENSEASG00005027248) #33 ENSEASG00005025893 ENSEASG00005032374 ENSEASG00005021391 ENSEASG00005029312 #35 Horse MODERN SPECIES 1 SLC7A9 (ENSECAG00000009914) #9 ENSECAG00000049232 CEP89 (ENSECAG00000020513) #10 FAAP24 (ENSECAG00000008757) #11 RHPN2 (ENSECAG00000010312) #12 GPATCH1 (ENSECAG00000022743) #13 WDR88 (ENSECAG00000008371) #14 LRP3 (ENSECAG00000010409) #15 SLC7A10 (ENSECAG00000014510) #16 CEBPA (ENSECAG00000032515) CEBPG (ENSECAG00000004879) #18 PEPD (ENSECAG00000023698) #19 CHST8 (ENSECAG00000008591) #20 KCTD15 (ENSECAG00000010397) ENSECAG00000047272 LSM14A (ENSECAG00000016281) #22 GARRE1 (ENSECAG00000004299) #23 GPI (ENSECAG00000018093) #25 PDCD2L (ENSECAG00000019921) #26 UBA2 (ENSECAG00000000048) #27 WTIP (ENSECAG00000002491) #28 ENSECAG00000036138 ENSECAG00000048692 ENSECAG00000042970 ENSECAG00000035557 ENSECAG00000011139 #32 ENSECAG00000052385 ZNF599 (ENSECAG00000013471) #33 ENSECAG00000059118 ENSECAG00000036449 ZNF30 (ENSECAG00000005128) #35 Carnivora ANCESTRAL SPECIES 2 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00940000169413 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00940000171246 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000163677.a.a.d.a.a.a ENSGT00940000161007 #37 ENSGT00390000018560.a.b Felidae ANCESTRAL SPECIES 7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153609.b.y.b ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Panthera ANCESTRAL SPECIES 10 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153609.b.y.b ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Tiger MODERN SPECIES 547 ENSPTIG00000011285 SLC7A9 (ENSPTIG00000011909) #9 CEP89 (ENSPTIG00000015712) #10 ENSPTIG00000016120 FAAP24 (ENSPTIG00000017907) #11 RHPN2 (ENSPTIG00000018334) #12 GPATCH1 (ENSPTIG00000019649) #13 WDR88 (ENSPTIG00000020346) #14 ENSPTIG00000021208 SLC7A10 (ENSPTIG00000021296) #16 ENSPTIG00000021511 CEBPG (ENSPTIG00000005371) #18 PEPD (ENSPTIG00000021640) #19 CHST8 (ENSPTIG00000022019) #20 KCTD15 (ENSPTIG00000002273) LSM14A (ENSPTIG00000005383) #22 GARRE1 (ENSPTIG00000007536) #23 GPI (ENSPTIG00000009315) #25 ENSPTIG00000011984 UBA2 (ENSPTIG00000012338) #27 ENSPTIG00000013234 ENSPTIG00000013428 ENSPTIG00000014276 #32 ZNF599 (ENSPTIG00000016024) #33 ZNF792 (ENSPTIG00000017597) #36 GRAMD1A (ENSPTIG00000017880) #37 SCN1B (ENSPTIG00000020098) HPN (ENSPTIG00000020881) ENSPTIG00000021485 LGI4 (ENSPTIG00000006166) FXYD1 (ENSPTIG00000006411) Panthera_a ANCESTRAL SPECIES 8 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153609.b.y.b ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000164353 #35 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a leopard MODERN SPECIES 93 SLC7A9 (ENSPPRG00000000104) #9 CEP89 (ENSPPRG00000022947) #10 ENSPPRG00000023275 FAAP24 (ENSPPRG00000023535) #11 RHPN2 (ENSPPRG00000024049) #12 GPATCH1 (ENSPPRG00000017245) #13 WDR88 (ENSPPRG00000015927) #14 LRP3 (ENSPPRG00000011026) #15 SLC7A10 (ENSPPRG00000010815) #16 ENSPPRG00000022066 CEBPA (ENSPPRG00000022055) CEBPG (ENSPPRG00000022037) #18 PEPD (ENSPPRG00000010330) #19 CHST8 (ENSPPRG00000008119) #20 KCTD15 (ENSPPRG00000007883) LSM14A (ENSPPRG00000007358) #22 GARRE1 (ENSPPRG00000006768) #23 GPI (ENSPPRG00000006040) #25 PDCD2L (ENSPPRG00000004377) #26 UBA2 (ENSPPRG00000004046) #27 WTIP (ENSPPRG00000003899) #28 ENSPPRG00000003776 ENSPPRG00000003689 ENSPPRG00000002901 #32 ZNF599 (ENSPPRG00000000759) #33 ZNF30 (ENSPPRG00000000559) #35 ZNF792 (ENSPPRG00000022760) #36 GRAMD1A (ENSPPRG00000022881) #37 SCN1B (ENSPPRG00000023978) HPN (ENSPPRG00000024061) FXYD3 (ENSPPRG00000024329) lion MODERN SPECIES 15 ENSPLOG00000010558 CEP89 (ENSPLOG00000010392) #10 FAAP24 (ENSPLOG00000010325) #11 ENSPLOG00000010286 RHPN2 (ENSPLOG00000010204) #12 GPATCH1 (ENSPLOG00000010167) #13 ENSPLOG00000010083 LRP3 (ENSPLOG00000010050) #15 SLC7A10 (ENSPLOG00000009985) #16 CEBPA (ENSPLOG00000009961) ENSPLOG00000009938 #18 PEPD (ENSPLOG00000009800) #19 CHST8 (ENSPLOG00000009742) #20 KCTD15 (ENSPLOG00000009678) ENSPLOG00000009638 LSM14A (ENSPLOG00000009572) #22 GARRE1 (ENSPLOG00000009526) #23 GPI (ENSPLOG00000009479) #25 PDCD2L (ENSPLOG00000009445) #26 UBA2 (ENSPLOG00000009310) #27 WTIP (ENSPLOG00000009237) #28 ENSPLOG00000009201 ENSPLOG00000009173 ENSPLOG00000009138 #32 ZNF599 (ENSPLOG00000009087) #33 ENSPLOG00000009010 ZNF792 (ENSPLOG00000008969) #36 GRAMD1A (ENSPLOG00000008532) #37 SCN1B (ENSPLOG00000008377) HPN (ENSPLOG00000008279) FXYD3 (ENSPLOG00000008147) Cat MODERN SPECIES 246 SLC7A9 (ENSFCAG00000014914) #9 ENSFCAG00000027289 CEP89 (ENSFCAG00000014915) #10 FAAP24 (ENSFCAG00000022497) #11 ENSFCAG00000033650 RHPN2 (ENSFCAG00000014916) #12 GPATCH1 (ENSFCAG00000014917) #13 WDR88 (ENSFCAG00000030222) #14 LRP3 (ENSFCAG00000014920) #15 SLC7A10 (ENSFCAG00000014921) #16 CEBPA (ENSFCAG00000041373) ENSFCAG00000045267 #18 PEPD (ENSFCAG00000007976) #19 CHST8 (ENSFCAG00000031868) #20 KCTD15 (ENSFCAG00000007977) LSM14A (ENSFCAG00000022801) #22 GARRE1 (ENSFCAG00000005277) #23 GPI (ENSFCAG00000005278) #25 PDCD2L (ENSFCAG00000025691) #26 UBA2 (ENSFCAG00000029937) #27 WTIP (ENSFCAG00000035179) #28 ZNF599 (ENSFCAG00000031530) #33 ENSFCAG00000051931 ENSFCAG00000049906 ZNF792 (ENSFCAG00000023692) #36 GRAMD1A (ENSFCAG00000008878) #37 HPN (ENSFCAG00000008882) FXYD3 (ENSFCAG00000039009) LGI4 (ENSFCAG00000008889) FXYD1 (ENSFCAG00000049114) ENSFCAG00000042410 Caniformia ANCESTRAL SPECIES 1 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00940000169413 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00940000171246 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00950000182858.A.a.b ENSGT00940000159953.C #33 ENSGT00950000185322 ENSGT00940000162928 #36 ENSGT00940000163677.a.a.d.a.a.a ENSGT00940000161007 #37 Canidae ANCESTRAL SPECIES 5 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00940000169413 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT01050000246353 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00950000182858.A.a.b.h ENSGT00950000182858.A.a.b.g ENSGT00940000159953.C #33 ENSGT00950000185322 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b Canis_lupus ANCESTRAL SPECIES ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00940000169413 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT01050000246353 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707.g #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00950000182858.A.a.b.h ENSGT00950000182858.A.a.b.g ENSGT00940000159953.C #33 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 Dingo MODERN SPECIES 125 SLC7A9 (ENSCAFG00020019778) #9 CEP89 (ENSCAFG00020019752) #10 ENSCAFG00020019747 ENSCAFG00020019744 #11 RHPN2 (ENSCAFG00020019742) #12 GPATCH1 (ENSCAFG00020019731) #13 LRP3 (ENSCAFG00020019720) #15 SLC7A10 (ENSCAFG00020019693) #16 ENSCAFG00020019691 CEBPG (ENSCAFG00020019687) #18 PEPD (ENSCAFG00020019683) #19 CHST8 (ENSCAFG00020019672) #20 KCTD15 (ENSCAFG00020019656) ENSCAFG00020019643 ENSCAFG00020019628 LSM14A (ENSCAFG00020019624) #22 GARRE1 (ENSCAFG00020019618) #23 ENSCAFG00020019591 #25 PDCD2L (ENSCAFG00020019584) #26 UBA2 (ENSCAFG00020019581) #27 WTIP (ENSCAFG00020019580) #28 ENSCAFG00020019579 ENSCAFG00020019578 ENSCAFG00020019577 #32 ENSCAFG00020019576 ENSCAFG00020019572 ZNF599 (ENSCAFG00020019570) #33 ZNF792 (ENSCAFG00020019568) #36 GRAMD1A (ENSCAFG00020019400) #37 SCN1B (ENSCAFG00020019378) HPN (ENSCAFG00020019300) Dog MODERN SPECIES TDRD12 (ENSCAFG00845000471) #8 SLC7A9 (ENSCAFG00845000428) #9 CEP89 (ENSCAFG00845000371) #10 FAAP24 (ENSCAFG00845000331) #11 RHPN2 (ENSCAFG00845000287) #12 GPATCH1 (ENSCAFG00845000257) #13 WDR88 (ENSCAFG00845000209) #14 LRP3 (ENSCAFG00845000195) #15 SLC7A10 (ENSCAFG00845000168) #16 CEBPG (ENSCAFG00845000152) #18 PEPD (ENSCAFG00845000128) #19 CHST8 (ENSCAFG00845000098) #20 KCTD15 (ENSCAFG00845000086) ENSCAFG00845000081 ENSCAFG00845004290 LSM14A (ENSCAFG00845004271) #22 GARRE1 (ENSCAFG00845004239) #23 GPI (ENSCAFG00845004146) #25 PDCD2L (ENSCAFG00845004074) #26 UBA2 (ENSCAFG00845004052) #27 WTIP (ENSCAFG00845004023) #28 ENSCAFG00845003997 ENSCAFG00845003977 ENSCAFG00845003947 #32 ENSCAFG00845003934 ZNF599 (ENSCAFG00845003919) #33 ZNF792 (ENSCAFG00845003883) #36 GRAMD1A (ENSCAFG00845003861) #37 SCN1B (ENSCAFG00845003824) HPN (ENSCAFG00845003738) FXYD3 (ENSCAFG00845003604) Red fox MODERN SPECIES 80 TDRD12 (ENSVVUG00000016637) #8 SLC7A9 (ENSVVUG00000016626) #9 CEP89 (ENSVVUG00000016607) #10 FAAP24 (ENSVVUG00000016604) #11 RHPN2 (ENSVVUG00000016587) #12 GPATCH1 (ENSVVUG00000016572) #13 WDR88 (ENSVVUG00000016568) #14 ENSVVUG00000016565 #15 SLC7A10 (ENSVVUG00000016564) #16 CEBPA (ENSVVUG00000016555) CEBPG (ENSVVUG00000016552) #18 PEPD (ENSVVUG00000016526) #19 CHST8 (ENSVVUG00000016516) #20 KCTD15 (ENSVVUG00000016508) ENSVVUG00000016504 LSM14A (ENSVVUG00000016491) #22 KIAA0355 (ENSVVUG00000016475) #23 GPI (ENSVVUG00000016427) #25 UBA2 (ENSVVUG00000016410) #27 ENSVVUG00000016405 #28 ENSVVUG00000016397 ENSVVUG00000016386 ENSVVUG00000016382 ENSVVUG00000016373 #32 ENSVVUG00000016364 ENSVVUG00000016353 ZNF599 (ENSVVUG00000016339) #33 ENSVVUG00000016334 ZNF792 (ENSVVUG00000016325) #36 GRAMD1A (ENSVVUG00000015379) #37 SCN1B (ENSVVUG00000015352) Caniformia_b ANCESTRAL SPECIES 2 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00940000171246 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00950000185322 ENSGT00940000162928 #36 ENSGT00940000163677.a.a.d.a.a.a ENSGT00940000161007 #37 ENSGT00390000018560.a.b Mustelinae ANCESTRAL SPECIES 49 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00940000171246 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00940000159953.C #33 ENSGT00940000162928 #36 ENSGT00940000161007 #37 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a American mink MODERN SPECIES 95 ENSNVIG00000019776 SLC7A9 (ENSNVIG00000019724) #9 CEP89 (ENSNVIG00000019683) #10 FAAP24 (ENSNVIG00000019668) #11 RHPN2 (ENSNVIG00000019645) #12 GPATCH1 (ENSNVIG00000019604) #13 WDR88 (ENSNVIG00000019568) #14 LRP3 (ENSNVIG00000019559) #15 SLC7A10 (ENSNVIG00000019536) #16 ENSNVIG00000019525 CEBPG (ENSNVIG00000019517) #18 PEPD (ENSNVIG00000019451) #19 CHST8 (ENSNVIG00000019437) #20 KCTD15 (ENSNVIG00000019393) ENSNVIG00000019378 LSM14A (ENSNVIG00000019344) #22 GARRE1 (ENSNVIG00000019310) #23 GPI (ENSNVIG00000019263) #25 ENSNVIG00000019238 #26 ENSNVIG00000019230 UBA2 (ENSNVIG00000019181) #27 WTIP (ENSNVIG00000019158) #28 ENSNVIG00000019151 ENSNVIG00000019144 ENSNVIG00000019124 #32 ENSNVIG00000019111 ##33 ZNF599 (ENSNVIG00000019107) #33 ENSNVIG00000019100 ENSNVIG00000019085 #36 ENSNVIG00000019076 #36 GRAMD1A (ENSNVIG00000019013) #37 Ferret MODERN SPECIES 272 TDRD12 (ENSMPUG00000007791) #8 SLC7A9 (ENSMPUG00000007696) #9 CEP89 (ENSMPUG00000007682) #10 FAAP24 (ENSMPUG00000007678) #11 RHPN2 (ENSMPUG00000007671) #12 GPATCH1 (ENSMPUG00000007658) #13 WDR88 (ENSMPUG00000007632) #14 LRP3 (ENSMPUG00000007608) #15 SLC7A10 (ENSMPUG00000007598) #16 CEBPA (ENSMPUG00000007593) CEBPG (ENSMPUG00000018937) #18 PEPD (ENSMPUG00000007578) #19 CHST8 (ENSMPUG00000007575) #20 KCTD15 (ENSMPUG00000007565) ENSMPUG00000007563 LSM14A (ENSMPUG00000007549) #22 GARRE1 (ENSMPUG00000007535) #23 GPI (ENSMPUG00000007520) #25 PDCD2L (ENSMPUG00000007480) #26 UBA2 (ENSMPUG00000007464) #27 ENSMPUG00000007456 #28 ENSMPUG00000007444 ENSMPUG00000007434 ENSMPUG00000007424 #32 ZNF599 (ENSMPUG00000007415) #33 ENSMPUG00000007410 ENSMPUG00000007403 #36 ENSMPUG00000007398 #36 ENSMPUG00000007395 GRAMD1A (ENSMPUG00000007379) #37 SCN1B (ENSMPUG00000007332) Ursidae ANCESTRAL SPECIES 8 ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707.f #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00950000182858.A.a.b ENSGT00940000159953.C.b #33 ENSGT00950000185322 ENSGT00940000162928 #36 ENSGT00940000163677.a.a.d.a.a.a ENSGT00940000161007 #37 ENSGT00390000018560.a.b Giant Panda MODERN SPECIES 3 NUDT19 (ENSAMEG00000009842) #7 ENSAMEG00000009847 SLC7A9 (ENSAMEG00000015459) #9 CEP89 (ENSAMEG00000015514) #10 FAAP24 (ENSAMEG00000015524) #11 RHPN2 (ENSAMEG00000015528) #12 GPATCH1 (ENSAMEG00000015575) #13 WDR88 (ENSAMEG00000008257) #14 LRP3 (ENSAMEG00000024584) #15 SLC7A10 (ENSAMEG00000008261) #16 CEBPA (ENSAMEG00000028966) CEBPG (ENSAMEG00000018841) #18 PEPD (ENSAMEG00000004320) #19 CHST8 (ENSAMEG00000016999) #20 KCTD15 (ENSAMEG00000016985) LSM14A (ENSAMEG00000016980) #22 GARRE1 (ENSAMEG00000016959) #23 GPI (ENSAMEG00000016896) #25 PDCD2L (ENSAMEG00000016885) #26 UBA2 (ENSAMEG00000016854) #27 ENSAMEG00000016849 #28 ENSAMEG00000029149 ENSAMEG00000028639 ENSAMEG00000031402 #32 ENSAMEG00000000176 #33 ENSAMEG00000025656 ZNF30 (ENSAMEG00000000178) #35 ENSAMEG00000029469 ZNF792 (ENSAMEG00000027706) #36 GRAMD1A (ENSAMEG00000000180) #37 SCN1B (ENSAMEG00000000189) Ursus ANCESTRAL SPECIES 222 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT01050000246353 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707.f #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 #32 ENSGT00950000182858.A.a.b.j American black bear MODERN SPECIES 1166 ENSUAMG00000017311 LSM14A (ENSUAMG00000017314) #22 GARRE1 (ENSUAMG00000017318) #23 GPI (ENSUAMG00000017322) #25 PDCD2L (ENSUAMG00000017326) #26 ENSUAMG00000017328 ENSUAMG00000017329 ENSUAMG00000017331 Polar bear DUPLICATION Polar bear MODERN SPECIES 128 TIMM21 (ENSUMAG00000004599) FBXO15 (ENSUMAG00000004592) NETO1 (ENSUMAG00000004574) ENSUMAG00000004564 ENSUMAG00000004554 ENSUMAG00000004474 ENSUMAG00000004435 CD226 (ENSUMAG00000004424) DOK6 (ENSUMAG00000004418) CCDC102B (ENSUMAG00000004396) TMX3 (ENSUMAG00000004385) DSEL (ENSUMAG00000004377) ENSUMAG00000004368 ENSUMAG00000004367 ENSUMAG00000004356 ENSUMAG00000004345 #22 STIM2 (ENSUMAG00000004243) ENSUMAG00000004223 TBC1D19 (ENSUMAG00000004209) ENSUMAG00000004204 CCKAR (ENSUMAG00000004192) RBPJ (ENSUMAG00000004171) SMIM20 (ENSUMAG00000004164) SEL1L3 (ENSUMAG00000003892) SLC34A2 (ENSUMAG00000003792) ANAPC4 (ENSUMAG00000003767) ZCCHC4 (ENSUMAG00000003758) PI4K2B (ENSUMAG00000003697) SEPSECS (ENSUMAG00000003690) LGI2 (ENSUMAG00000003678) CCDC149 (ENSUMAG00000003673) Polar bear MODERN SPECIES 329 CEBPG (ENSUMAG00000019245) #18 PEPD (ENSUMAG00000019161) #19 KCTD15 (ENSUMAG00000019139) ENSUMAG00000019137 ENSUMAG00000019134 LSM14A (ENSUMAG00000019127) #22 GARRE1 (ENSUMAG00000019012) #23 GPI (ENSUMAG00000018968) #25 PDCD2L (ENSUMAG00000018961) #26 UBA2 (ENSUMAG00000018569) #27 ENSUMAG00000018473 #28 ENSUMAG00000018446 #32 ENSUMAG00000018433 ENSUMAG00000018429 Atlantogenata ANCESTRAL SPECIES 149 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 Xenarthra ANCESTRAL SPECIES 879 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 Armadillo DUPLICATION Armadillo MODERN SPECIES 723 ENSDNOG00000045697 ENSDNOG00000041017 #22 GARRE1 (ENSDNOG00000024677) #23 ENSDNOG00000038832 #25 PDCD2L (ENSDNOG00000034575) #26 UBA2 (ENSDNOG00000012858) #27 WTIP (ENSDNOG00000032907) #28 Armadillo MODERN SPECIES 2810 ENSDNOG00000036113 ENSDNOG00000001780 ENSDNOG00000044655 GOPC (ENSDNOG00000039802) DCBLD1 (ENSDNOG00000012574) ROS1 (ENSDNOG00000010519) VGLL2 (ENSDNOG00000044127) RFX6 (ENSDNOG00000019162) GPRC6A (ENSDNOG00000019148) FAM162B (ENSDNOG00000038676) KPNA5 (ENSDNOG00000005326) ZUP1 (ENSDNOG00000044598) RSPH4A (ENSDNOG00000001347) ENSDNOG00000025447 ENSDNOG00000038517 #22 ENSDNOG00000039401 ENSDNOG00000044348 ENSDNOG00000007516 CALHM4 (ENSDNOG00000007514) CALHM5 (ENSDNOG00000036788) ENSDNOG00000045345 DSE (ENSDNOG00000045714) ENSDNOG00000046391 ENSDNOG00000039632 TSPYL4 (ENSDNOG00000042279) ENSDNOG00000030677 ENSDNOG00000007860 FRK (ENSDNOG00000010080) ENSDNOG00000049577 VWC2 (ENSDNOG00000024647) Sloth MODERN SPECIES 661 LSM14A (ENSCHOG00000006555) #22 Afrotheria ANCESTRAL SPECIES 44 ENSGT00940000157021 ENSGT00940000153725.a.b.a ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 Afrotheria_a ANCESTRAL SPECIES 43 ENSGT00940000157021 ENSGT00940000153725.a.b.a ENSGT00420000029858 #7 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 Elephant MODERN SPECIES 393 RGS9BP (ENSLAFG00000008696) NUDT19 (ENSLAFG00000032048) #7 TDRD12 (ENSLAFG00000008698) #8 SLC7A9 (ENSLAFG00000008707) #9 CEP89 (ENSLAFG00000006394) #10 FAAP24 (ENSLAFG00000006401) #11 RHPN2 (ENSLAFG00000013586) #12 GPATCH1 (ENSLAFG00000013589) #13 WDR88 (ENSLAFG00000013599) #14 LRP3 (ENSLAFG00000027575) #15 CEBPA (ENSLAFG00000030435) CEBPG (ENSLAFG00000017998) #18 PEPD (ENSLAFG00000021407) #19 CHST8 (ENSLAFG00000013232) #20 KCTD15 (ENSLAFG00000014114) LSM14A (ENSLAFG00000005233) #22 ENSLAFG00000027355 GARRE1 (ENSLAFG00000013224) #23 GPI (ENSLAFG00000013770) #25 PDCD2L (ENSLAFG00000013778) #26 ENSLAFG00000013784 #27 WTIP (ENSLAFG00000022542) #28 ENSLAFG00000029580 ENSLAFG00000009990 ADCY7 (ENSLAFG00000009995) BRD7 (ENSLAFG00000017854) NKD1 (ENSLAFG00000004213) SNX20 (ENSLAFG00000015658) NOD2 (ENSLAFG00000014161) CYLD (ENSLAFG00000014171) SALL1 (ENSLAFG00000015251) Hyrax MODERN SPECIES 593 LSM14A (ENSPCAG00000010597) #22 Tenrec MODERN SPECIES 807 LSM14A (ENSETEG00000000494) #22 Marsupialia ANCESTRAL SPECIES 18 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000171246 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT01090000260045.C.e.a.a.a.b.b.b.b.d ENSGT01090000260024.A.a.a.b.b.b.b.`b.a.a.a.a.a.b ENSGT01090000260024.A.a.a.b.b.b.b.`b.a.a.b.b ENSGT01090000260024.A.a.a.b.b.b.b.`b.a.a.b.a Opossum MODERN SPECIES ENSMODG00000012288 #7 TDRD12 (ENSMODG00000012286) #8 SLC7A9 (ENSMODG00000012256) #9 ENSMODG00000050814 CEP89 (ENSMODG00000012246) #10 FAAP24 (ENSMODG00000012243) #11 RHPN2 (ENSMODG00000012240) #12 ENSMODG00000039982 GPATCH1 (ENSMODG00000012226) #13 LRP3 (ENSMODG00000012209) #15 SLC7A10 (ENSMODG00000012202) #16 CEBPA (ENSMODG00000012162) PEPD (ENSMODG00000012139) #19 CHST8 (ENSMODG00000012122) #20 KCTD15 (ENSMODG00000047340) LSM14A (ENSMODG00000012034) #22 GARRE1 (ENSMODG00000011999) #23 GPI (ENSMODG00000011980) #25 ENSMODG00000038214 UBA2 (ENSMODG00000011934) #27 WTIP (ENSMODG00000011920) #28 ENSMODG00000040634 ENSMODG00000023496 ENSMODG00000046028 ENSMODG00000047552 ENSMODG00000037880 ENSMODG00000047914 ENSMODG00000042003 ENSMODG00000036982 ENSMODG00000048278 ENSMODG00000023499 Marsupialia_b ANCESTRAL SPECIES 5 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT01090000260045.C.e.a.a.a.b.b.b.b.d ENSGT01090000260024.A.a.a.b.b.b.b.`b.a.a.a.a.a.b ENSGT01090000260024.A.a.a.b.b.b.b.`b.a.a.b.b ENSGT01090000260024.A.a.a.b.b.b.b.`b.a.a.b.a ENSGT01090000260024.A.a.a.b.b.b.b.`b.a.b.a ENSGT01090000260024.A.a.a.b.b.b.b.`b.b.d ENSGT01090000260024.A.a.a.b.b.b.b.`b.a.b.b ENSGT01050000244815.A.c.b.a.a.a.a.a.b ENSGT01050000244815.A.c.b.a.a.a.a.b Diprotodontia ANCESTRAL SPECIES 4 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT01090000260045.C.e.a.a.a.b.b.b.b.d ENSGT01090000260024.A.a.a.b.b.b.b.`b.a.a.a.a.a.b ENSGT01090000260024.A.a.a.b.b.b.b.`b.a.a.b.b ENSGT01090000260024.A.a.a.b.b.b.b.`b.a.a.b.a ENSGT01090000260024.A.a.a.b.b.b.b.`b.b.c ENSGT01090000260024.A.a.a.b.b.b.b.`b.a.b.b ENSGT01050000244815.A.c.b.a.a.a.a.a.b ENSGT01050000244815.A.c.b.a.a.a.a.b ENSGT00950000182890.D.c.b.a.a.b.b.a.d.b.a.b Diprotodontia_a ANCESTRAL SPECIES 5 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00390000003210 #23 ENSGT00390000000707.a #25 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000009774 ENSGT01090000260045.C.e.a.a.a.b.b.b.b.d ENSGT01090000260024.A.a.a.b.b.b.b.`b.a.a.a.a.a.b ENSGT01090000260024.A.a.a.b.b.b.b.`b.a.a.a.a.b ENSGT00940000163270 ENSGT00940000158795 ENSGT00940000159362 ENSGT00940000155946 ENSGT00940000154079.b ENSGT00940000159944 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1024 ENSVURG00010011177 #8 ENSVURG00010011153 #9 ENSVURG00010011149 ENSVURG00010011054 #10 ENSVURG00010011034 #11 ENSVURG00010011018 #12 ENSVURG00010011001 #13 ENSVURG00010010985 #14 ENSVURG00010010960 #15 ENSVURG00010010935 #16 ENSVURG00010010917 ENSVURG00010010912 #18 ENSVURG00010010900 #19 ENSVURG00010010875 #20 ENSVURG00010010823 ENSVURG00010010787 #22 ENSVURG00010010719 #23 ENSVURG00010010699 #25 ENSVURG00010010683 ENSVURG00010010665 #27 ENSVURG00010010652 #28 ENSVURG00010010646 ENSVURG00010010641 ENSVURG00010010638 ENSVURG00010010628 ENSVURG00010010608 ENSVURG00010010602 ENSVURG00010010589 ENSVURG00010010580 ENSVURG00010010559 ENSVURG00010010556 Common wonbat MODERN SPECIES 1024 ENSVURG00010000438 #8 ENSVURG00010000392 #9 ENSVURG00010000377 ENSVURG00010000219 #10 ENSVURG00010000178 #11 ENSVURG00010000158 #12 ENSVURG00010000118 #13 ENSVURG00010018129 #14 ENSVURG00010018123 #15 ENSVURG00010018112 #16 ENSVURG00010018106 ENSVURG00010018099 #18 ENSVURG00010018092 #19 ENSVURG00010018082 #20 ENSVURG00010018076 ENSVURG00010018052 #22 ENSVURG00010018040 #23 ENSVURG00010018033 #25 PDCD2L (ENSVURG00010018027) #26 ENSVURG00010018017 #27 ENSVURG00010018012 #28 ENSVURG00010018009 ENSVURG00010018007 ENSVURG00010018005 ENSVURG00010017999 ENSVURG00010017996 ENSVURG00010017995 ENSVURG00010017993 ENSVURG00010017988 ENSVURG00010017987 ENSVURG00010017984 koala MODERN SPECIES 19 ENSPCIG00000020992 #7 TDRD12 (ENSPCIG00000020993) #8 SLC7A9 (ENSPCIG00000020995) #9 ENSPCIG00000021000 FAAP24 (ENSPCIG00000021002) #11 RHPN2 (ENSPCIG00000020997) #12 GPATCH1 (ENSPCIG00000021003) #13 ENSPCIG00000021005 #14 LRP3 (ENSPCIG00000009598) #15 SLC7A10 (ENSPCIG00000009596) #16 CEBPA (ENSPCIG00000023590) CEBPG (ENSPCIG00000023592) #18 PEPD (ENSPCIG00000023598) #19 CHST8 (ENSPCIG00000023610) #20 KCTD15 (ENSPCIG00000023613) LSM14A (ENSPCIG00000021798) #22 GARRE1 (ENSPCIG00000021789) #23 ENSPCIG00000021784 #25 ENSPCIG00000030905 UBA2 (ENSPCIG00000021781) #27 WTIP (ENSPCIG00000021778) #28 ENSPCIG00000025635 ENSPCIG00000025634 ENSPCIG00000033413 ENSPCIG00000032834 ENSPCIG00000026340 ENSPCIG00000026339 ENSPCIG00000026338 ENSPCIG00000017432 ENSPCIG00000026337 ENSPCIG00000026335 Wallaby MODERN SPECIES 1444 LSM14A (ENSMEUG00000011018) #22 Tasmanian devil MODERN SPECIES 1 SLC7A9 (ENSSHAG00000000814) #9 ENSSHAG00000026384 CEP89 (ENSSHAG00000026537) #10 FAAP24 (ENSSHAG00000016372) #11 RHPN2 (ENSSHAG00000016222) #12 ENSSHAG00000021461 GPATCH1 (ENSSHAG00000016016) #13 ENSSHAG00000023131 #14 LRP3 (ENSSHAG00000015576) #15 SLC7A10 (ENSSHAG00000015445) #16 CEBPA (ENSSHAG00000032313) CEBPG (ENSSHAG00000032373) #18 PEPD (ENSSHAG00000022416) #19 CHST8 (ENSSHAG00000011737) #20 KCTD15 (ENSSHAG00000026507) LSM14A (ENSSHAG00000031465) #22 ENSSHAG00000024393 GPI (ENSSHAG00000028580) #25 GARRE1 (ENSSHAG00000027054) #23 ENSSHAG00000003703 #26 UBA2 (ENSSHAG00000002459) #27 ENSSHAG00000023098 #28 ENSSHAG00000000462 ENSSHAG00000002095 ENSSHAG00000001978 ENSSHAG00000024720 ENSSHAG00000029542 ENSSHAG00000001427 ENSSHAG00000029029 ENSSHAG00000030145 ENSSHAG00000022041 Platypus MODERN SPECIES 2 SLC7A9 (ENSOANG00000012726) #9 CEP89 (ENSOANG00000012728) #10 ENSOANG00000012729 FAAP24 (ENSOANG00000038390) #11 RHPN2 (ENSOANG00000012731) #12 GPATCH1 (ENSOANG00000012732) #13 ENSOANG00000050528 #14 LRP3 (ENSOANG00000012736) #15 SLC7A10 (ENSOANG00000012737) #16 CEBPA (ENSOANG00000045999) CEBPG (ENSOANG00000008143) #18 PEPD (ENSOANG00000008142) #19 CHST8 (ENSOANG00000046283) #20 KCTD15 (ENSOANG00000049256) SS18L2 (ENSOANG00000042807) LSM14A (ENSOANG00000009581) #22 GARRE1 (ENSOANG00000009579) #23 GPI (ENSOANG00000009577) #25 ENSOANG00000038088 #28 UBA2 (ENSOANG00000009574) #27 ENSOANG00000009573 ENSOANG00000037853 #26 CES1 (ENSOANG00000009572) ENSOANG00000030760 ENSOANG00000004187 AMFR (ENSOANG00000004185) NUDT21 (ENSOANG00000039756) OGFOD1 (ENSOANG00000002091) BBS2 (ENSOANG00000002092) MT4 (ENSOANG00000000565) ENSOANG00000040407 Sauria ANCESTRAL SPECIES 14 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000171246 ENSGT00940000155200.d.a ENSGT01030000235283 ENSGT00940000158339 #26 ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000165234 ENSGT00940000160687 ENSGT00940000159757 Lepidosauria ANCESTRAL SPECIES 139 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000171246 ENSGT00940000155200.d.a ENSGT01030000235283 ENSGT00940000158339 #26 Episquamata ANCESTRAL SPECIES 11 ENSGT00940000153216.a.a.c.b ENSGT00940000158705 ENSGT00940000159278 ENSGT00940000157600 ENSGT00390000002142 ENSGT00390000016453 ENSGT00390000008931 ENSGT00390000011262 ENSGT00940000159082 ENSGT00940000165483 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000000707 #25 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00940000157918 ENSGT00940000154022.a.a ENSGT00940000154824.b ENSGT00940000162283 ENSGT00390000013928 ENSGT00940000160309 ENSGT00390000004596 ENSGT00940000156939 ENSGT00390000004554 Laterata ANCESTRAL SPECIES 19 ENSGT00940000153216.a.a.c.b.v ENSGT00940000158705 ENSGT00940000159278 ENSGT00940000157600 ENSGT00390000002142 ENSGT00390000016453 ENSGT00390000008931 ENSGT00390000011262 ENSGT00940000159082 ENSGT00940000165483 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000000707 #25 ENSGT00390000003210 #23 ENSGT00940000160407 ENSGT00940000157918 ENSGT00940000154022.a.a ENSGT00940000162283 ENSGT00390000013928 ENSGT00940000160309 ENSGT00390000004596 ENSGT00940000156939 ENSGT00390000004554 ENSGT00390000004215.a.b.b.c.a Common wall lizard MODERN SPECIES 16 ZNRF1 (ENSPMRG00000019846) WDR59 (ENSPMRG00000019858) FA2H (ENSPMRG00000019882) MLKL (ENSPMRG00000019891) RFWD3 (ENSPMRG00000019910) GLG1 (ENSPMRG00000019924) PDPR (ENSPMRG00000019951) ENSPMRG00000019961 ENSPMRG00000019970 CEBPG (ENSPMRG00000019974) #18 PEPD (ENSPMRG00000019984) #19 CHST8 (ENSPMRG00000020015) #20 KCTD15 (ENSPMRG00000020026) ENSPMRG00000020032 ENSPMRG00000020036 LSM14A (ENSPMRG00000020045) #22 PDCD2L (ENSPMRG00000020060) #26 UBA2 (ENSPMRG00000020079) #27 WTIP (ENSPMRG00000020092) #28 GPI (ENSPMRG00000020107) #25 GARRE1 (ENSPMRG00000020117) #23 SS18L2 (ENSPMRG00000020124) KATNB1 (ENSPMRG00000020176) KIFC3 (ENSPMRG00000020481) TEPP (ENSPMRG00000020520) ZNF319 (ENSPMRG00000020531) USB1 (ENSPMRG00000020546) MMP15 (ENSPMRG00000020590) CFAP20 (ENSPMRG00000020598) CSNK2A2 (ENSPMRG00000020610) CCDC113 (ENSPMRG00000020635) Argentine black and white tegu MODERN SPECIES 57 ENSSMRG00000001498 LDHD (ENSSMRG00000001524) ZNRF1 (ENSSMRG00000001533) WDR59 (ENSSMRG00000001550) FA2H (ENSSMRG00000001589) MLKL (ENSSMRG00000001595) RFWD3 (ENSSMRG00000001603) GLG1 (ENSSMRG00000001621) PDPR (ENSSMRG00000001633) ENSSMRG00000001645 CEBPA (ENSSMRG00000001653) CEBPG (ENSSMRG00000001658) #18 PEPD (ENSSMRG00000001671) #19 CHST8 (ENSSMRG00000001685) #20 KCTD15 (ENSSMRG00000001715) LSM14A (ENSSMRG00000001721) #22 PDCD2L (ENSSMRG00000001735) #26 UBA2 (ENSSMRG00000001739) #27 WTIP (ENSSMRG00000001746) #28 GPI (ENSSMRG00000001752) #25 ENSSMRG00000001763 GARRE1 (ENSSMRG00000001774) #23 SS18L2 (ENSSMRG00000001782) KATNB1 (ENSSMRG00000001790) KIFC3 (ENSSMRG00000001793) ENSSMRG00000001807 TEPP (ENSSMRG00000001829) ZNF319 (ENSSMRG00000002112) MMP15 (ENSSMRG00000002113) CFAP20 (ENSSMRG00000002125) CSNK2A2 (ENSSMRG00000002129) Toxicofera ANCESTRAL SPECIES 37 ENSGT00940000153216.a.a.c.b ENSGT00940000158705 ENSGT00940000159278 ENSGT00940000157600 ENSGT00390000002142 ENSGT00390000016453 ENSGT00390000008931 ENSGT00390000011262 ENSGT00940000159082 ENSGT00940000165483 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000000707 #25 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00940000157918 ENSGT00940000154022.a.a ENSGT00940000154824.b ENSGT00390000013928 ENSGT00940000160309 ENSGT00390000004596 ENSGT00940000156939 ENSGT00390000004554 ENSGT00390000004215.a.b.b.c.a Elapidae ANCESTRAL SPECIES 26 ENSGT00940000153216.a.a.c.b ENSGT00940000158705 ENSGT00940000159278 ENSGT00940000157600 ENSGT00390000002142 ENSGT00390000016453 ENSGT00390000008931 ENSGT00390000011262 ENSGT00940000159082 ENSGT00940000165483 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000000707 #25 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00940000157918 ENSGT00940000154022.a.a ENSGT00940000154824.b ENSGT00390000013928 ENSGT00940000160309 ENSGT00390000004596 ENSGT00940000156939.c ENSGT00390000004554 ENSGT00390000004215.a.b.b.c.a Elapidae_a ANCESTRAL SPECIES 45 ENSGT00940000153216.a.a.c.b ENSGT00940000158705 ENSGT00940000159278 ENSGT00940000157600 ENSGT00390000002142 ENSGT00390000016453 ENSGT00390000008931 ENSGT00390000011262 ENSGT00940000159082 ENSGT00940000165483 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000000707 #25 ENSGT00390000003210.l #23 ENSGT00390000003210.k #23 ENSGT00940000160407 ENSGT00940000157918 ENSGT00940000154022.a.a ENSGT00940000154824.b ENSGT00940000162283 ENSGT00390000013928 ENSGT00940000160309 ENSGT00390000004596 ENSGT00940000156939.c Acanthophiinae ANCESTRAL SPECIES 43 ENSGT00940000158705 ENSGT00940000159278 ENSGT00940000157600 ENSGT00390000002142 ENSGT00390000016453 ENSGT00390000008931 ENSGT00390000011262 ENSGT00940000159082 ENSGT00940000166736.a ENSGT00940000165483 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496.d ENSGT00940000154415 #22 ENSGT00940000158339 #26 ENSGT00550000074924 #27 ENSGT00940000160924 #28 ENSGT00390000000707 #25 ENSGT00390000003210.l #23 ENSGT00390000003210.k #23 ENSGT00940000160407 ENSGT00940000157918 ENSGT00940000154022.a.a ENSGT00940000154824.b ENSGT00940000162283 ENSGT00390000013928 ENSGT00940000160309 ENSGT00390000004596 ENSGT00940000156939.c Eastern brown snake MODERN SPECIES 69 LDHD (ENSPTXG00000006436) ZNRF1 (ENSPTXG00000006438) WDR59 (ENSPTXG00000006440) FA2H (ENSPTXG00000006609) MLKL (ENSPTXG00000006739) RFWD3 (ENSPTXG00000006740) GLG1 (ENSPTXG00000006741) PDPR (ENSPTXG00000006742) ENSPTXG00000006743 ENSPTXG00000006744 CEBPA (ENSPTXG00000006754) CEBPG (ENSPTXG00000006756) #18 PEPD (ENSPTXG00000006758) #19 CHST8 (ENSPTXG00000006762) #20 ENSPTXG00000006763 LSM14A (ENSPTXG00000006764) #22 PDCD2L (ENSPTXG00000006765) #26 UBA2 (ENSPTXG00000006767) #27 WTIP (ENSPTXG00000006768) #28 GARRE1 (ENSPTXG00000006770) #23 SS18L2 (ENSPTXG00000006771) KATNB1 (ENSPTXG00000006772) KIFC3 (ENSPTXG00000006817) CNGB1 (ENSPTXG00000006830) TEPP (ENSPTXG00000006999) ZNF319 (ENSPTXG00000007000) USB1 (ENSPTXG00000007001) MMP15 (ENSPTXG00000007002) CFAP20 (ENSPTXG00000007003) CSNK2A2 (ENSPTXG00000007004) CCDC113 (ENSPTXG00000007005) Mainland tiger snake MODERN SPECIES 127 ENSNSUG00000009051 ENSNSUG00000009052 LDHD (ENSNSUG00000009057) ZNRF1 (ENSNSUG00000009058) FA2H (ENSNSUG00000009059) MLKL (ENSNSUG00000009060) RFWD3 (ENSNSUG00000009061) GLG1 (ENSNSUG00000009063) ENSNSUG00000009064 ENSNSUG00000009085 CEBPA (ENSNSUG00000009120) CEBPG (ENSNSUG00000009122) #18 PEPD (ENSNSUG00000009123) #19 CHST8 (ENSNSUG00000009124) #20 ENSNSUG00000009125 LSM14A (ENSNSUG00000009126) #22 PDCD2L (ENSNSUG00000009127) #26 UBA2 (ENSNSUG00000009128) #27 WTIP (ENSNSUG00000009203) #28 GPI (ENSNSUG00000009204) #25 ENSNSUG00000009260 #23 ENSNSUG00000009261 #23 Blue-lipped sea krait MODERN SPECIES 8486 LSM14A (ENSLLTG00000017215) #22 Indian cobra MODERN SPECIES 12 ENSNNAG00000006603 LDHD (ENSNNAG00000006433) ZNRF1 (ENSNNAG00000006394) WDR59 (ENSNNAG00000006234) FA2H (ENSNNAG00000006206) MLKL (ENSNNAG00000006189) RFWD3 (ENSNNAG00000006163) GLG1 (ENSNNAG00000005866) PDPR (ENSNNAG00000005758) ENSNNAG00000005724 CEBPA (ENSNNAG00000005712) CEBPG (ENSNNAG00000005702) #18 PEPD (ENSNNAG00000005634) #19 CHST8 (ENSNNAG00000005620) #20 KCTD15 (ENSNNAG00000005586) LSM14A (ENSNNAG00000005547) #22 PDCD2L (ENSNNAG00000005525) #26 UBA2 (ENSNNAG00000005482) #27 WTIP (ENSNNAG00000005448) #28 GPI (ENSNNAG00000005274) #25 SS18L2 (ENSNNAG00000005229) GARRE1 (ENSNNAG00000005126) #23 KIFC3 (ENSNNAG00000004991) CNGB1 (ENSNNAG00000004636) TEPP (ENSNNAG00000004415) ZNF319 (ENSNNAG00000004368) USB1 (ENSNNAG00000004349) MMP15 (ENSNNAG00000004311) CFAP20 (ENSNNAG00000004284) CSNK2A2 (ENSNNAG00000004255) CCDC113 (ENSNNAG00000004209) Lizard MODERN SPECIES 1646 ENSACAG00000022480 #22 ENSACAG00000043557 ENSACAG00000001544 #27 tuatara MODERN SPECIES 668 CEBPA (ENSSPUG00000008636) CEBPG (ENSSPUG00000008642) #18 PEPD (ENSSPUG00000008654) #19 CHST8 (ENSSPUG00000008672) #20 KCTD15 (ENSSPUG00000008682) ENSSPUG00000008705 ENSSPUG00000008717 ENSSPUG00000008725 LSM14A (ENSSPUG00000008734) #22 SS18L2 (ENSSPUG00000008743) GARRE1 (ENSSPUG00000008759) #23 GPI (ENSSPUG00000008783) #25 WTIP (ENSSPUG00000008800) #28 ENSSPUG00000008834 #27 ENSSPUG00000008853 PDCD2L (ENSSPUG00000008857) #26 ENSSPUG00000008871 #27 ENSSPUG00000008885 ENSSPUG00000008892 Archelosauria ANCESTRAL SPECIES 16 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00940000164507 ENSGT00940000171283 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.a.a ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000165234 ENSGT00940000160687 Archosauria ANCESTRAL SPECIES 14 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291.f #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00940000171283 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.a.a ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000165234 ENSGT00940000160687 ENSGT00940000159757 Aves ANCESTRAL SPECIES 22 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291.f #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00940000171283 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 African ostrich MODERN SPECIES 737 ENSSCUG00000011968 #7 TDRD12 (ENSSCUG00000011970) #8 SLC7A9 (ENSSCUG00000011997) #9 CEP89 (ENSSCUG00000012031) #10 ENSSCUG00000012035 FAAP24 (ENSSCUG00000012036) #11 RHPN2 (ENSSCUG00000012043) #12 GPATCH1 (ENSSCUG00000012047) #13 LRP3 (ENSSCUG00000012050) #15 SLC7A10 (ENSSCUG00000012058) #16 CEBPG (ENSSCUG00000012082) #18 PEPD (ENSSCUG00000012089) #19 CHST8 (ENSSCUG00000012098) #20 KCTD15 (ENSSCUG00000012101) ENSSCUG00000012103 LSM14A (ENSSCUG00000012107) #22 GARRE1 (ENSSCUG00000012109) #23 GPI (ENSSCUG00000012125) #25 ENSSCUG00000012145 #28 Neognathae ANCESTRAL SPECIES 13 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291.f #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00940000171283 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 Neognathae_b ANCESTRAL SPECIES 15 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00940000171283 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 Neognathae_c ANCESTRAL SPECIES 18 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100.f #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00940000171283 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 Kakapo DUPLICATION Kakapo MODERN SPECIES 19 TDRD12 (ENSSHBG00005014145) #8 SLC7A9 (ENSSHBG00005011804) #9 CEP89 (ENSSHBG00005011674) #10 ENSSHBG00005011660 #11 ENSSHBG00005011638 #12 ENSSHBG00005011625 #12 GPATCH1 (ENSSHBG00005011591) #13 ENSSHBG00005011571 #15 ENSSHBG00005011415 #16 ENSSHBG00005011375 ENSSHBG00005011361 #18 PEPD (ENSSHBG00005011339) #19 ENSSHBG00005011313 #20 ENSSHBG00005011294 ENSSHBG00005011269 ENSSHBG00005011234 #22 ENSSHBG00005011210 ENSSHBG00005011190 #23 ENSSHBG00005011147 #25 ENSSHBG00005011112 #28 ENSSHBG00005011090 #27 PDCD2L (ENSSHBG00005011043) #26 ENSSHBG00005011015 ENSSHBG00005010944 CIAO2B (ENSSHBG00005010884) ENSSHBG00005010870 PDP2 (ENSSHBG00005010851) CA7 (ENSSHBG00005010814) NAE1 (ENSSHBG00005010780) TERB1 (ENSSHBG00005010733) ENSSHBG00005010667 Kakapo MODERN SPECIES 4 ENSSHBG00005000217 ENSSHBG00005000223 ENSSHBG00005000228 ENSSHBG00005000231 ENSSHBG00005000234 ENSSHBG00005000237 ENSSHBG00005000240 ENSSHBG00005000247 #11 ENSSHBG00005000249 ENSSHBG00005000261 #15 ENSSHBG00005000267 #16 ENSSHBG00005000272 ENSSHBG00005000273 #18 ENSSHBG00005000275 #20 ENSSHBG00005000277 ENSSHBG00005000280 #22 ENSSHBG00005000283 ENSSHBG00005000285 #23 ENSSHBG00005000289 #25 ENSSHBG00005000292 #28 ENSSHBG00005000294 ENSSHBG00005000296 #27 ENSSHBG00005000297 ENSSHBG00005000298 ENSSHBG00005000301 ENSSHBG00005000303 ENSSHBG00005000305 ENSSHBG00005000308 ENSSHBG00005000309 ENSSHBG00005000312 ENSSHBG00005000314 Golden eagle MODERN SPECIES 25 SLC7A9 (ENSACCG00020001411) #9 ENSACCG00020001387 CEP89 (ENSACCG00020001367) #10 ENSACCG00020001338 FAAP24 (ENSACCG00020001327) #11 RHPN2 (ENSACCG00020001302) #12 GPATCH1 (ENSACCG00020001248) #13 LRP3 (ENSACCG00020001206) #15 SLC7A10 (ENSACCG00020001170) #16 CEBPA (ENSACCG00020001161) CEBPG (ENSACCG00020001148) #18 PEPD (ENSACCG00020001123) #19 CHST8 (ENSACCG00020001104) #20 KCTD15 (ENSACCG00020001091) ENSACCG00020001071 LSM14A (ENSACCG00020001040) #22 SS18L2 (ENSACCG00020001012) GARRE1 (ENSACCG00020000988) #23 GPI (ENSACCG00020000962) #25 WTIP (ENSACCG00020000941) #28 UBA2 (ENSACCG00020000903) #27 PDCD2L (ENSACCG00020000879) #26 ENSACCG00020000836 ENSACCG00020000761 CIAO2B (ENSACCG00020000732) RRAD (ENSACCG00020000710) PDP2 (ENSACCG00020000696) CA7 (ENSACCG00020000679) NAE1 (ENSACCG00020000646) TERB1 (ENSACCG00020000619) DYNC1LI2 (ENSACCG00020000589) Passeriformes ANCESTRAL SPECIES 13 ENSGT00940000157553 ENSGT00940000153691.a.b ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a Great tit MODERN SPECIES 2 ADAMTS18 (ENSPMJG00000003468) CDH8 (ENSPMJG00000003533) SLC7A9 (ENSPMJG00000003558) #9 CEP89 (ENSPMJG00000003559) #10 FAAP24 (ENSPMJG00000003563) #11 RHPN2 (ENSPMJG00000003564) #12 GPATCH1 (ENSPMJG00000003568) #13 LRP3 (ENSPMJG00000003592) #15 SLC7A10 (ENSPMJG00000003594) #16 CEBPA (ENSPMJG00000003606) CEBPG (ENSPMJG00000003612) #18 PEPD (ENSPMJG00000003633) #19 CHST8 (ENSPMJG00000003649) #20 KCTD15 (ENSPMJG00000003650) ENSPMJG00000003666 LSM14A (ENSPMJG00000003684) #22 SS18L2 (ENSPMJG00000003689) GARRE1 (ENSPMJG00000003698) #23 GPI (ENSPMJG00000003705) #25 ENSPMJG00000003721 #28 UBA2 (ENSPMJG00000003731) #27 ENSPMJG00000003751 NAE1 (ENSPMJG00000003756) CA7 (ENSPMJG00000003773) PDP2 (ENSPMJG00000003841) RRAD (ENSPMJG00000003845) CIAO2B (ENSPMJG00000003852) CES3 (ENSPMJG00000003857) TERB1 (ENSPMJG00000003867) DYNC1LI2 (ENSPMJG00000003882) CMTM4 (ENSPMJG00000003912) Passeriformes_d ANCESTRAL SPECIES 13 ENSGT00940000157553 ENSGT00940000153691.a.b ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a Passeriformes_g ANCESTRAL SPECIES 46 ENSGT00940000153691.a.b ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a Medium ground finch MODERN SPECIES 187 ENSGFOG00000013139 #13 LRP3 (ENSGFOG00000013135) #15 SLC7A10 (ENSGFOG00000013129) #16 CEBPG (ENSGFOG00000013126) #18 ENSGFOG00000013125 PEPD (ENSGFOG00000013111) #19 CHST8 (ENSGFOG00000013102) #20 KCTD15 (ENSGFOG00000013099) LSM14A (ENSGFOG00000013094) #22 SS18L2 (ENSGFOG00000013091) GARRE1 (ENSGFOG00000013075) #23 GPI (ENSGFOG00000013064) #25 ENSGFOG00000012888 #28 PDCD2L (ENSGFOG00000012873) #26 Passeroidea ANCESTRAL SPECIES 46 ENSGT00940000153691.a.b ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a Zebra finch MODERN SPECIES 2 CEP89 (ENSTGUG00000009207) #10 SLC7A9 (ENSTGUG00000009229) #9 ENSTGUG00000009256 CDH8 (ENSTGUG00000009281) RHPN2 (ENSTGUG00000009375) #12 GPATCH1 (ENSTGUG00000009401) #13 LRP3 (ENSTGUG00000009422) #15 SLC7A10 (ENSTGUG00000009432) #16 CEBPA (ENSTGUG00000009472) CEBPG (ENSTGUG00000020378) #18 PEPD (ENSTGUG00000009480) #19 CHST8 (ENSTGUG00000025626) #20 KCTD15 (ENSTGUG00000027555) ENSTGUG00000009520 ENSTGUG00000022257 LSM14A (ENSTGUG00000009535) #22 GARRE1 (ENSTGUG00000009542) #23 GPI (ENSTGUG00000009572) #25 ENSTGUG00000019366 ENSTGUG00000024385 #28 ENSTGUG00000019808 #28 UBA2 (ENSTGUG00000009609) #27 PDCD2L (ENSTGUG00000009619) #26 ENSTGUG00000020357 ENSTGUG00000009626 ENSTGUG00000009678 CIAO2B (ENSTGUG00000009680) RRAD (ENSTGUG00000009686) PDP2 (ENSTGUG00000009698) CA7 (ENSTGUG00000009706) NAE1 (ENSTGUG00000009718) Common canary MODERN SPECIES 36 GPATCH1 (ENSSCAG00000011898) #13 PEPD (ENSSCAG00000011891) #19 CEBPG (ENSSCAG00000011879) #18 CEBPA (ENSSCAG00000011875) SLC7A10 (ENSSCAG00000011789) #16 LRP3 (ENSSCAG00000011737) #15 CHST8 (ENSSCAG00000011728) #20 KCTD15 (ENSSCAG00000011722) ENSSCAG00000011716 UBA2 (ENSSCAG00000011705) #27 ENSSCAG00000011702 ENSSCAG00000011691 ENSSCAG00000011674 CIAO2B (ENSSCAG00000011662) RRAD (ENSSCAG00000011651) LSM14A (ENSSCAG00000011643) #22 SS18L2 (ENSSCAG00000011640) GARRE1 (ENSSCAG00000011632) #23 GPI (ENSSCAG00000011522) #25 ENSSCAG00000011487 #28 PDP2 (ENSSCAG00000011486) CA7 (ENSSCAG00000011482) NAE1 (ENSSCAG00000011083) ENSSCAG00000010988 TERB1 (ENSSCAG00000010977) DYNC1LI2 (ENSSCAG00000010867) CMTM4 (ENSSCAG00000010842) CMTM3 (ENSSCAG00000010838) TK2 (ENSSCAG00000010828) ENSSCAG00000010823 CDH5 (ENSSCAG00000010812) Flycatcher MODERN SPECIES 2 ENSFALG00000025065 SLC7A9 (ENSFALG00000000274) #9 CEP89 (ENSFALG00000000269) #10 FAAP24 (ENSFALG00000000267) #11 RHPN2 (ENSFALG00000000266) #12 GPATCH1 (ENSFALG00000007821) #13 LRP3 (ENSFALG00000007817) #15 SLC7A10 (ENSFALG00000007790) #16 ENSFALG00000023200 CEBPA (ENSFALG00000007785) CEBPG (ENSFALG00000014352) #18 PEPD (ENSFALG00000007783) #19 CHST8 (ENSFALG00000007781) #20 KCTD15 (ENSFALG00000007779) ENSFALG00000007775 LSM14A (ENSFALG00000007771) #22 ENSFALG00000007767 ENSFALG00000007756 #23 ENSFALG00000007751 #25 ENSFALG00000027223 #28 ENSFALG00000007738 #27 ENSFALG00000026355 ENSFALG00000007734 ENSFALG00000007728 ENSFALG00000007722 CIAO2B (ENSFALG00000007720) RRAD (ENSFALG00000007717) PDP2 (ENSFALG00000014347) CA7 (ENSFALG00000007714) NAE1 (ENSFALG00000007698) ENSFALG00000007680 Galloanserae ANCESTRAL SPECIES 12 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291.f #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a Anatidae ANCESTRAL SPECIES 17 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291.f #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a Pink-footed goose MODERN SPECIES 28 TDRD12 (ENSABRG00000008836) #8 SLC7A9 (ENSABRG00000009059) #9 CEP89 (ENSABRG00000009562) #10 FAAP24 (ENSABRG00000009705) #11 RHPN2 (ENSABRG00000009707) #12 GPATCH1 (ENSABRG00000009725) #13 WDR88 (ENSABRG00000009752) #14 LRP3 (ENSABRG00000009781) #15 SLC7A10 (ENSABRG00000009798) #16 CEBPA (ENSABRG00000009838) CEBPG (ENSABRG00000009845) #18 PEPD (ENSABRG00000009852) #19 CHST8 (ENSABRG00000009864) #20 KCTD15 (ENSABRG00000009868) ENSABRG00000009874 LSM14A (ENSABRG00000009888) #22 SS18L2 (ENSABRG00000009896) GARRE1 (ENSABRG00000009931) #23 GPI (ENSABRG00000009969) #25 WTIP (ENSABRG00000009998) #28 UBA2 (ENSABRG00000010006) #27 PDCD2L (ENSABRG00000010029) #26 ENSABRG00000010045 ENSABRG00000010080 CIAO2B (ENSABRG00000010122) RRAD (ENSABRG00000010135) PDP2 (ENSABRG00000010143) CA7 (ENSABRG00000010175) NAE1 (ENSABRG00000010292) TERB1 (ENSABRG00000010307) DYNC1LI2 (ENSABRG00000010324) Duck MODERN SPECIES 3 COQ9 (ENSAPLG00000005848) CIAPIN1 (ENSAPLG00000006126) SLC7A9 (ENSAPLG00000006352) #9 CEP89 (ENSAPLG00000006679) #10 FAAP24 (ENSAPLG00000006977) #11 RHPN2 (ENSAPLG00000007093) #12 GPATCH1 (ENSAPLG00000007584) #13 WDR88 (ENSAPLG00000007912) #14 LRP3 (ENSAPLG00000007963) #15 SLC7A10 (ENSAPLG00000008042) #16 CEBPA (ENSAPLG00000020367) CEBPG (ENSAPLG00000000568) #18 PEPD (ENSAPLG00000008402) #19 CHST8 (ENSAPLG00000009142) #20 KCTD15 (ENSAPLG00000009251) LSM14A (ENSAPLG00000009420) #22 ENSAPLG00000019738 GARRE1 (ENSAPLG00000009718) #23 GPI (ENSAPLG00000010107) #25 WTIP (ENSAPLG00000023301) #28 UBA2 (ENSAPLG00000011122) #27 PDCD2L (ENSAPLG00000011770) #26 ENSAPLG00000011908 ENSAPLG00000028614 ENSAPLG00000023248 CIAO2B (ENSAPLG00000026091) RRAD (ENSAPLG00000012711) PDP2 (ENSAPLG00000000609) CA7 (ENSAPLG00000012712) NAE1 (ENSAPLG00000013192) TERB1 (ENSAPLG00000013612) Phasianidae ANCESTRAL SPECIES 12 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291.f #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a Japanese quail MODERN SPECIES 2 NUDT19 (ENSCJPG00005014439) #7 TDRD12 (ENSCJPG00005014440) #8 SLC7A9 (ENSCJPG00005014443) #9 CEP89 (ENSCJPG00005014444) #10 FAAP24 (ENSCJPG00005014445) #11 RHPN2 (ENSCJPG00005014446) #12 GPATCH1 (ENSCJPG00005014447) #13 LRP3 (ENSCJPG00005014448) #15 SLC7A10 (ENSCJPG00005014449) #16 CEBPA (ENSCJPG00005014618) CEBPG (ENSCJPG00005014620) #18 PEPD (ENSCJPG00005014621) #19 CHST8 (ENSCJPG00005014622) #20 KCTD15 (ENSCJPG00005014623) ENSCJPG00005014624 LSM14A (ENSCJPG00005014625) #22 SS18L2 (ENSCJPG00005014626) GARRE1 (ENSCJPG00005014627) #23 GPI (ENSCJPG00005014628) #25 WTIP (ENSCJPG00005014630) #28 UBA2 (ENSCJPG00005014631) #27 PDCD2L (ENSCJPG00005014632) #26 ENSCJPG00005014633 ENSCJPG00005014634 ENSCJPG00005014635 CIAO2B (ENSCJPG00005014636) RRAD (ENSCJPG00005014637) CA7 (ENSCJPG00005014640) NAE1 (ENSCJPG00005014641) TERB1 (ENSCJPG00005014642) DYNC1LI2 (ENSCJPG00005014643) Phasianidae_b ANCESTRAL SPECIES 14 ENSGT00420000029847 #8 ENSGT00940000156370 #9 ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291.f #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.b ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000160687 ENSGT00940000159757 ENSGT00390000005075 ENSGT00390000008295.a ENSGT00940000159573 ENSGT00940000160432 Chicken MODERN SPECIES 2 ENSGALG00010024827 #8 SLC7A9 (ENSGALG00010024831) #9 CEP89 (ENSGALG00010024852) #10 FAAP24 (ENSGALG00010024868) #11 RHPN2 (ENSGALG00010024878) #12 GPATCH1 (ENSGALG00010025949) #13 WDR88 (ENSGALG00010024895) #14 LRP3 (ENSGALG00010024977) #15 SLC7A10 (ENSGALG00010025010) #16 CEBPA (ENSGALG00010025039) CEBPG (ENSGALG00010025114) #18 PEPD (ENSGALG00010025200) #19 CHST8 (ENSGALG00010025230) #20 KCTD15 (ENSGALG00010009079) ENSGALG00010009138 LSM14A (ENSGALG00010009192) #22 SS18L2 (ENSGALG00010009334) GARRE1 (ENSGALG00010009355) #23 GPI (ENSGALG00010009385) #25 WTIP (ENSGALG00010009398) #28 UBA2 (ENSGALG00010009494) #27 ENSGALG00010010494 ENSGALG00010009619 ENSGALG00010009525 FAM96B (ENSGALG00010009652) RRAD (ENSGALG00010009666) PDP2 (ENSGALG00010009761) CA7 (ENSGALG00010006979) NAE1 (ENSGALG00010007041) DYNC1LI2 (ENSGALG00010007092) CMTM4 (ENSGALG00010010374) Turkey MODERN SPECIES 4 ENSMGAG00000006235 ENSMGAG00000015611 ENSMGAG00000006222 ENSMGAG00000006219 ENSMGAG00000017263 ENSMGAG00000020122 ENSMGAG00000017854 ENSMGAG00000020371 ENSMGAG00000018549 #27 ENSMGAG00000006114 ENSMGAG00000006104 #28 ENSMGAG00000006052 #25 ENSMGAG00000018236 #23 ENSMGAG00000006036 #23 ENSMGAG00000018995 ENSMGAG00000006009 #22 ENSMGAG00000005984 CHST8 (ENSMGAG00000005979) #20 ENSMGAG00000015603 #18 ENSMGAG00000005946 #19 ENSMGAG00000022220 SLC7A10 (ENSMGAG00000005866) #16 ENSMGAG00000005857 #15 ENSMGAG00000005775 #13 ENSMGAG00000019428 #13 ENSMGAG00000005729 #12 ENSMGAG00000005724 #11 ENSMGAG00000005691 #10 ENSMGAG00000005650 #9 ENSMGAG00000005608 #7 ENSMGAG00000017074 Australian saltwater crocodile MODERN SPECIES 35 ENSCPRG00005004311 ENSCPRG00005004315 ENSCPRG00005004318 FAAP24 (ENSCPRG00005004323) #11 RHPN2 (ENSCPRG00005004327) #12 GPATCH1 (ENSCPRG00005004341) #13 WDR88 (ENSCPRG00005004346) #14 LRP3 (ENSCPRG00005004351) #15 SLC7A10 (ENSCPRG00005004357) #16 CEBPG (ENSCPRG00005004370) #18 PEPD (ENSCPRG00005004378) #19 CHST8 (ENSCPRG00005004397) #20 KCTD15 (ENSCPRG00005004399) ENSCPRG00005004418 ENSCPRG00005004453 LSM14A (ENSCPRG00005004463) #22 SS18L2 (ENSCPRG00005004548) GARRE1 (ENSCPRG00005004566) #23 GPI (ENSCPRG00005004580) #25 WTIP (ENSCPRG00005004599) #28 UBA2 (ENSCPRG00005004632) #27 PDCD2L (ENSCPRG00005004926) #26 ENSCPRG00005004933 ENSCPRG00005005010 ENSCPRG00005005056 ENSCPRG00005005246 RRAD (ENSCPRG00005005256) ENSCPRG00005005282 PDP2 (ENSCPRG00005005299) ENSCPRG00005005302 ENSCPRG00005005318 Cryptodira ANCESTRAL SPECIES 14 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b.j ENSGT00390000011620.b.i ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00940000164507 ENSGT00940000171283 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.a.a ENSGT00390000017697.b ENSGT00940000155200.d.b ENSGT00940000159836 ENSGT00940000165234 ENSGT00940000160687 Testudinoidea ANCESTRAL SPECIES 13 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b.j ENSGT00390000011620.b.i ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00940000164507 ENSGT00940000171283 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.b.j ENSGT00940000155200.d.a.a ENSGT00940000155200.d.b.i ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000165234 Emydidae ANCESTRAL SPECIES 33 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b.j ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00940000164507 ENSGT00940000171283 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.b.j ENSGT00940000155200.d.a.a ENSGT00940000155200.d.b.i ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000165234 Three-toed box turtle MODERN SPECIES 60 TDRD12 (ENSTMTG00000022781) #8 SLC7A9 (ENSTMTG00000022791) #9 CEP89 (ENSTMTG00000022794) #10 ENSTMTG00000022797 FAAP24 (ENSTMTG00000022798) #11 RHPN2 (ENSTMTG00000022802) #12 GPATCH1 (ENSTMTG00000022805) #13 WDR88 (ENSTMTG00000022808) #14 LRP3 (ENSTMTG00000022810) #15 SLC7A10 (ENSTMTG00000022811) #16 CEBPA (ENSTMTG00000022813) CEBPG (ENSTMTG00000022815) #18 PEPD (ENSTMTG00000022817) #19 CHST8 (ENSTMTG00000022820) #20 KCTD15 (ENSTMTG00000022824) LSM14A (ENSTMTG00000022829) #22 SS18L2 (ENSTMTG00000022832) GARRE1 (ENSTMTG00000022833) #23 GPI (ENSTMTG00000022834) #25 WTIP (ENSTMTG00000022835) #28 ENSTMTG00000022837 UBA2 (ENSTMTG00000022838) #27 PDCD2L (ENSTMTG00000022839) #26 ENSTMTG00000022841 ENSTMTG00000022843 ENSTMTG00000022846 CIAO2B (ENSTMTG00000022847) RRAD (ENSTMTG00000022848) ENSTMTG00000022849 ENSTMTG00000022850 PDP2 (ENSTMTG00000022852) painted turtle MODERN SPECIES 4 CEP89 (ENSCPBG00000000457) #10 ENSCPBG00000000531 FAAP24 (ENSCPBG00000000575) #11 RHPN2 (ENSCPBG00000000592) #12 GPATCH1 (ENSCPBG00000000666) #13 WDR88 (ENSCPBG00000001046) #14 LRP3 (ENSCPBG00000001086) #15 SLC7A10 (ENSCPBG00000001106) #16 ENSCPBG00000001219 CEBPA (ENSCPBG00000001223) CEBPG (ENSCPBG00000001227) #18 PEPD (ENSCPBG00000001238) #19 CHST8 (ENSCPBG00000001302) #20 KCTD15 (ENSCPBG00000001320) ENSCPBG00000001355 LSM14A (ENSCPBG00000001387) #22 SS18L2 (ENSCPBG00000001400) GARRE1 (ENSCPBG00000001468) #23 GPI (ENSCPBG00000001478) #25 WTIP (ENSCPBG00000001496) #28 ENSCPBG00000001515 UBA2 (ENSCPBG00000001539) #27 PDCD2L (ENSCPBG00000001559) #26 ENSCPBG00000001574 ENSCPBG00000001583 Testudinidae ANCESTRAL SPECIES 17 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT01000000221079 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00390000011620.b.i ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200.d.a.b ENSGT00940000155200.d.a.a ENSGT00940000155200.d.b.i ENSGT00390000017697.b ENSGT00940000159836 ENSGT00940000165234 ENSGT00940000160687 ENSGT00940000159757 ENSGT00550000074901 Abingdon island giant tortoise MODERN SPECIES 2570 PEPD (ENSCABG00000006160) #19 CHST8 (ENSCABG00000006155) #20 KCTD15 (ENSCABG00000006153) LSM14A (ENSCABG00000006149) #22 SS18L2 (ENSCABG00000006148) GARRE1 (ENSCABG00000006147) #23 GPI (ENSCABG00000006145) #25 ENSCABG00000006144 WTIP (ENSCABG00000006141) #28 UBA2 (ENSCABG00000006112) #27 PDCD2L (ENSCABG00000006108) #26 ENSCABG00000006107 Goode s thornscrub tortoise MODERN SPECIES 3 CEP89 (ENSGEVG00005009487) #10 ENSGEVG00005009542 FAAP24 (ENSGEVG00005009583) #11 RHPN2 (ENSGEVG00005009604) #12 GPATCH1 (ENSGEVG00005009654) #13 WDR88 (ENSGEVG00005009737) #14 LRP3 (ENSGEVG00005009838) #15 SLC7A10 (ENSGEVG00005009940) #16 ENSGEVG00005010278 CEBPA (ENSGEVG00005010303) CEBPG (ENSGEVG00005010316) #18 PEPD (ENSGEVG00005010344) #19 CHST8 (ENSGEVG00005010392) #20 KCTD15 (ENSGEVG00005010441) ENSGEVG00005010559 LSM14A (ENSGEVG00005010715) #22 SS18L2 (ENSGEVG00005010754) GARRE1 (ENSGEVG00005010777) #23 GPI (ENSGEVG00005010824) #25 WTIP (ENSGEVG00005010949) #28 ENSGEVG00005011206 UBA2 (ENSGEVG00005011268) #27 ENSGEVG00005011513 PDCD2L (ENSGEVG00005012279) #26 ENSGEVG00005012420 ENSGEVG00005013150 ENSGEVG00005013731 CIAO2B (ENSGEVG00005013796) RRAD (ENSGEVG00005013828) ENSGEVG00005013944 PDP2 (ENSGEVG00005014085) Chinese turtle MODERN SPECIES 1642 ENSPSIG00000015334 LSM14A (ENSPSIG00000014378) #22 GARRE1 (ENSPSIG00000013491) #23 GPI (ENSPSIG00000011429) #25 WTIP (ENSPSIG00000010952) #28 UBA2 (ENSPSIG00000009074) #27 PDCD2L (ENSPSIG00000008695) #26 ENSPSIG00000007869 ENSPSIG00000015304 CIAO2B (ENSPSIG00000015187) ENSPSIG00000014518 RRAD (ENSPSIG00000014134) ENSPSIG00000011754 PDP2 (ENSPSIG00000000169) CA7 (ENSPSIG00000011718) NAE1 (ENSPSIG00000007713) TERB1 (ENSPSIG00000006062) Anura ANCESTRAL SPECIES 10 ENSGT00420000029858 #7 ENSGT00940000166448 ENSGT00940000156370 #9 ENSGT00730000111020.a ENSGT00390000018876 #10 ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000153657.B #19 ENSGT00940000159100 #20 ENSGT00940000159496 ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000167949.b ENSGT00940000159836 ENSGT00940000165234 ENSGT00940000160687 ENSGT00940000159757 ENSGT00390000015359 ENSGT00390000002290 ENSGT00940000161887 ENSGT00730000111190 ENSGT01100000263484.B.a Frog MODERN SPECIES 4 slc7a9 (ENSXETG00000018268) #9 ENSXETG00000041178 cep89 (ENSXETG00000018269) #10 faap24 (ENSXETG00000027542) #11 rhpn2 (ENSXETG00000018271) #12 gpatch1 (ENSXETG00000018276) #13 wdr88 (ENSXETG00000036859) #14 lrp3 (ENSXETG00000033897) #15 slc7a10 (ENSXETG00000018279) #16 cebpa (ENSXETG00000042713) pepd (ENSXETG00000018297) #19 ENSXETG00000042173 ENSXETG00000048220 ENSXETG00000044155 kctd15 (ENSXETG00000016868) #20 lsm14a (ENSXETG00000002359) #22 ss18l2 (ENSXETG00000043471) garre1 (ENSXETG00000032218) #23 gpi (ENSXETG00000002361) #25 wtip (ENSXETG00000042605) #28 uba2 (ENSXETG00000002374) #27 ENSXETG00000044376 ces5a (ENSXETG00000039742) ENSXETG00000048573 rrad (ENSXETG00000017408) cdh16 (ENSXETG00000017410) ENSXETG00000017419 ca7 (ENSXETG00000017420) mvd (ENSXETG00000017427) cyba (ENSXETG00000017431) il17c (ENSXETG00000017433) Leishan spiny toad MODERN SPECIES 1 CEP89 (ENSLLEG00000008749) #10 ENSLLEG00000009100 ENSLLEG00000009141 FAAP24 (ENSLLEG00000009186) #11 RHPN2 (ENSLLEG00000009267) #12 GPATCH1 (ENSLLEG00000009428) #13 WDR88 (ENSLLEG00000009753) #14 LRP3 (ENSLLEG00000009881) #15 SLC7A10 (ENSLLEG00000009954) #16 CEBPA (ENSLLEG00000010043) ENSLLEG00000010068 #19 ENSLLEG00000010198 CHST8 (ENSLLEG00000010230) #20 ENSLLEG00000010281 KCTD15 (ENSLLEG00000010335) LSM14A (ENSLLEG00000010640) #22 GARRE1 (ENSLLEG00000011560) #23 GPI (ENSLLEG00000011764) #25 WTIP (ENSLLEG00000012391) #28 ENSLLEG00000012631 UBA2 (ENSLLEG00000012704) #27 ENSLLEG00000013268 ENSLLEG00000013439 ENSLLEG00000013306 ENSLLEG00000013532 ENSLLEG00000013652 ENSLLEG00000014191 ENSLLEG00000014214 ENSLLEG00000014389 ENSLLEG00000015424 ENSLLEG00000015583 Coelacanth MODERN SPECIES 1115 CHST8 (ENSLACG00000008960) #20 KCTD15 (ENSLACG00000007213) ENSLACG00000002425 LSM14A (ENSLACG00000000166) #22 Actinopterygii ANCESTRAL SPECIES 49 ENSGT00730000111020.a ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000166016 ENSGT00940000153657.B #19 ENSGT00940000159496 ENSGT00940000159100 #20 ENSGT00940000156453.b ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00550000074924 #27 ENSGT00940000158339 #26 ENSGT00940000155200 ENSGT00390000001368 ENSGT00940000154158 ENSGT00520000055637.A.b ENSGT00940000158707.a.b ENSGT00390000003374 ENSGT00940000155581.C ENSGT00940000156978 ENSGT00390000011116 Reedfish MODERN SPECIES 17 SLC7A9 (ENSECRG00000006336) #9 ENSECRG00000006353 #8 nudt19 (ENSECRG00000006367) #7 RGS9BP (ENSECRG00000006375) ENSECRG00000006395 ENSECRG00000006414 ENSECRG00000006427 #11 ENSECRG00000006438 cebpa (ENSECRG00000006483) ENSECRG00000006494 cebpg (ENSECRG00000006505) pepd (ENSECRG00000006539) #19 CHST8 (ENSECRG00000006616) #20 kctd15a (ENSECRG00000006626) ENSECRG00000006636 lsm14ab (ENSECRG00000006650) #22 ss18l2 (ENSECRG00000006662) GARRE1 (ENSECRG00000006672) #23 gpib (ENSECRG00000006697) #25 wtip (ENSECRG00000006734) #28 ENSECRG00000006744 uba2 (ENSECRG00000006760) #27 PDCD2L (ENSECRG00000006785) #26 ENSECRG00000006797 ENSECRG00000006883 FBXO31 (ENSECRG00000006978) ENSECRG00000006987 map1lc3b (ENSECRG00000006993) ZCCHC14 (ENSECRG00000007002) ENSECRG00000007011 jph3b (ENSECRG00000007027) Neopterygii ANCESTRAL SPECIES 25 ENSGT00730000111020.a ENSGT00390000009456 #11 ENSGT00940000153837.a.b #12 ENSGT00390000007074 #13 ENSGT00940000162291 #14 ENSGT00940000160021 #15 ENSGT00940000156469 #16 ENSGT00940000162646 ENSGT00940000160676 #18 ENSGT00940000166016 ENSGT00940000153657.B #19 ENSGT00940000159496 ENSGT00940000159100 #20 ENSGT00940000156453.b ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707 #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00940000160204 ENSGT00390000012054.b ENSGT00390000009212 ENSGT00940000155218.B ENSGT00390000005410 ENSGT00940000166270 ENSGT00390000006293 ENSGT00390000002381.b ENSGT00940000156938 ENSGT00940000164450.b Spotted gar MODERN SPECIES 662 CEP89 (ENSLOCG00000001728) #10 zgc:165481 (ENSLOCG00000017585) faap24 (ENSLOCG00000001761) #11 rhpn2 (ENSLOCG00000001772) #12 gpatch1 (ENSLOCG00000001800) #13 ENSLOCG00000001845 #14 ENSLOCG00000001859 #15 ENSLOCG00000001876 slc7a10a (ENSLOCG00000001884) #16 cebpa (ENSLOCG00000017586) cebpg (ENSLOCG00000017587) pepd (ENSLOCG00000001905) #19 CHST8 (ENSLOCG00000001953) #20 kctd15a (ENSLOCG00000001969) ENSLOCG00000001983 lsm14ab (ENSLOCG00000002022) #22 ss18l2 (ENSLOCG00000002055) GARRE1 (ENSLOCG00000002069) #23 gpib (ENSLOCG00000002085) #25 wtip (ENSLOCG00000002111) #28 sdr42e1 (ENSLOCG00000002140) hsd17b2 (ENSLOCG00000002170) zgc:101040 (ENSLOCG00000017588) mphosph6 (ENSLOCG00000002187) CDH13 (ENSLOCG00000002199) mlycd (ENSLOCG00000002214) ENSLOCG00000002229 hsbp1a (ENSLOCG00000002268) ENSLOCG00000002278 kcng4a (ENSLOCG00000002291) ENSLOCG00000002305 Osteoglossocephalai ANCESTRAL SPECIES 114 ENSGT00390000016435 ENSGT00940000157431 ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159496 ENSGT00940000159100 #20 ENSGT00940000156453.b ENSGT00390000011620.b ENSGT00940000154415 #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 Osteoglossiformes ANCESTRAL SPECIES 149 ENSGT00390000002564.b.c.o ENSGT00390000001424.xb ENSGT00940000156052.k.a.a ENSGT00940000158358.b.b ENSGT00390000014907.A.b ENSGT00950000183037.A.a.j ENSGT00390000016435.b ENSGT00940000157431.a ENSGT00390000001195.b.n ENSGT00950000183113.b.a ENSGT00940000159103.g ENSGT00940000157011.h ENSGT00940000156594.i ENSGT00940000159100.j #20 ENSGT00390000011620.b.c ENSGT00940000154415 #22 ENSGT00390000003210.j #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924.b #28 ENSGT00940000158070 ENSGT00390000008576 ENSGT00940000158301.h ENSGT00940000159096.f ENSGT00950000183170.a ENSGT00440000033589.c.h ENSGT00530000063759.a ENSGT00940000155938.b.a.a ENSGT00940000158043.h ENSGT00940000155706.cb ENSGT00520000055620.B ENSGT00390000017730 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 16 slc15a2 (ENSSFOG00015005042) ENSSFOG00015010846 ENSSFOG00015027112 mrgbp (ENSSFOG00015004958) id1 (ENSSFOG00015004946) HM13 (ENSSFOG00015004935) NCOA3 (ENSSFOG00015004921) ZMYND8 (ENSSFOG00015004869) ENSSFOG00015029989 ENSSFOG00015004778 ENSSFOG00015004762 ENSSFOG00015004754 ENSSFOG00015020845 cdh4 (ENSSFOG00015004694) TAF4 (ENSSFOG00015004642) ENSSFOG00015026043 #22 ENSSFOG00015004627 ENSSFOG00015026540 SS18L1 (ENSSFOG00015004557) ENSSFOG00015004530 irf10 (ENSSFOG00015026713) bmp7a (ENSSFOG00015004476) rae1 (ENSSFOG00015004461) rbm38 (ENSSFOG00015004453) uqcrc1 (ENSSFOG00015025374) ENSSFOG00015031667 cidec (ENSSFOG00015004373) ENSSFOG00015032996 dynlrb1 (ENSSFOG00015024368) st3gal8 (ENSSFOG00015004316) ENSSFOG00015004014 Asian bonytongue MODERN SPECIES 20 IGFALS (ENSSFOG00015018942) rhot2 (ENSSFOG00015019007) NLRC3 (ENSSFOG00015019088) NME2 (ENSSFOG00015019139) UTP18 (ENSSFOG00015019158) si:dkeyp-113d7.1 (ENSSFOG00015019168) ENSSFOG00015019171 stx1b (ENSSFOG00015019181) cbx2 (ENSSFOG00015029247) ENSSFOG00015019209 aimp2 (ENSSFOG00015019233) idh3b (ENSSFOG00015019246) CHST8 (ENSSFOG00015028393) #20 KCTD15 (ENSSFOG00015031424) ENSSFOG00015019329 lsm14ab (ENSSFOG00015019348) #22 GARRE1 (ENSSFOG00015019374) #23 gpia (ENSSFOG00015019464) #25 wtip (ENSSFOG00015027010) #28 ENSSFOG00015019536 ENSSFOG00015019565 mphosph6 (ENSSFOG00015027140) heatr3 (ENSSFOG00015019635) tent4b (ENSSFOG00015019677) adcy7 (ENSSFOG00015019702) nkd1 (ENSSFOG00015029086) nod2 (ENSSFOG00015019861) CYLD (ENSSFOG00015019946) sall1a (ENSSFOG00015020020) TOX3 (ENSSFOG00015020029) RBL2 (ENSSFOG00015020077) Asian bonytongue MODERN SPECIES 22 cox5ab (ENSSFOG00015002555) ARID3B (ENSSFOG00015002516) ENSSFOG00015028516 cyp1a (ENSSFOG00015002494) edc3 (ENSSFOG00015002439) csk (ENSSFOG00015002374) ENSSFOG00015025159 ENSSFOG00015002319 adal (ENSSFOG00015002282) larp6a (ENSSFOG00015029939) ENSSFOG00015002229 THSD4 (ENSSFOG00015002128) CHST8 (ENSSFOG00015002088) #20 KCTD15 (ENSSFOG00015002056) ENSSFOG00015029112 LSM14A (ENSSFOG00015001960) #22 GARRE1 (ENSSFOG00015001900) #23 gpib (ENSSFOG00015001822) #25 wtip (ENSSFOG00015032562) #28 sdr42e1 (ENSSFOG00015030286) cnep1r1 (ENSSFOG00015001761) tent4b (ENSSFOG00015001704) adcy7 (ENSSFOG00015001679) brd7 (ENSSFOG00015001669) NKD1 (ENSSFOG00015028035) SNX20 (ENSSFOG00015032637) sall1a (ENSSFOG00015001590) TOX3 (ENSSFOG00015030392) ENSSFOG00015001548 CHD9 (ENSSFOG00015001327) rpgrip1l (ENSSFOG00015001280) P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 42 CHST8 (ENSPKIG00000000574) #20 KCTD15 (ENSPKIG00000000545) ENSPKIG00000000517 lsm14ab (ENSPKIG00000000497) #22 ss18l2 (ENSPKIG00000000487) ENSPKIG00000000477 GARRE1 (ENSPKIG00000000417) #23 gpia (ENSPKIG00000000351) #25 ENSPKIG00000000317 wtip (ENSPKIG00000000290) #28 zgc:101040 (ENSPKIG00000000263) mphosph6 (ENSPKIG00000000253) heatr3 (ENSPKIG00000000235) tent4b (ENSPKIG00000000206) adcy7 (ENSPKIG00000000122) nkd1 (ENSPKIG00000000079) nod2 (ENSPKIG00000022380) CYLD (ENSPKIG00000022297) sall1a (ENSPKIG00000022251) P. kingsleyae MODERN SPECIES 178 ENSPKIG00000004358 ENSPKIG00000004372 cyp1a (ENSPKIG00000004398) edc3 (ENSPKIG00000004416) csk (ENSPKIG00000004436) CPLX3 (ENSPKIG00000004458) ENSPKIG00000004476 adal (ENSPKIG00000004490) larp6a (ENSPKIG00000004511) ENSPKIG00000004523 ENSPKIG00000004536 THSD4 (ENSPKIG00000004581) CHST8 (ENSPKIG00000004680) #20 KCTD15 (ENSPKIG00000004710) ENSPKIG00000004730 LSM14A (ENSPKIG00000004788) #22 GARRE1 (ENSPKIG00000004853) #23 gpib (ENSPKIG00000004922) #25 wtip (ENSPKIG00000005017) #28 sdr42e1 (ENSPKIG00000005042) cnep1r1 (ENSPKIG00000005054) tent4b (ENSPKIG00000005085) adcy7 (ENSPKIG00000005166) brd7 (ENSPKIG00000005303) NKD1 (ENSPKIG00000005346) SNX20 (ENSPKIG00000005366) sall1a (ENSPKIG00000005383) ENSPKIG00000005398 TOX3 (ENSPKIG00000005426) Clupeocephala DUPLICATION Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 15 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00940000159496.l ENSGT00940000159100.h #20 ENSGT00940000155981.h ENSGT00940000156037.a.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 Otomorpha ANCESTRAL SPECIES 47 ENSGT00940000157431.c.b ENSGT00940000178010 ENSGT00940000157431.d ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.e.g ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00940000158905 ENSGT00940000155943.a ENSGT00530000063948.b ENSGT00390000004930 ENSGT00940000154745.b ENSGT00940000168208 ENSGT00940000166643 ENSGT00950000183090.A ENSGT00940000178971 ENSGT00940000156218 Clupeiformes ANCESTRAL SPECIES 34 ENSGT00940000157431.c.a ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00940000154415.mb #22 ENSGT00390000011620.b.e.g ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00940000158970 ENSGT00390000014065 ENSGT00390000017480 ENSGT00940000161832.a ENSGT00940000154856.A.a.c.a.a ENSGT00390000000020.b ENSGT01020000230346.E Atlantic herring MODERN SPECIES 22 ENSCHAG00000005214 ENSCHAG00000005104 hrasb (ENSCHAG00000005068) rassf7b (ENSCHAG00000005064) tollip (ENSCHAG00000004884) ENSCHAG00000004727 ENSCHAG00000004693 mrpl21 (ENSCHAG00000004645) pepd (ENSCHAG00000004629) #19 ENSCHAG00000004608 ENSCHAG00000004602 CHST8 (ENSCHAG00000004590) #20 ENSCHAG00000004558 KCTD15 (ENSCHAG00000004450) ENSCHAG00000004344 lsm14ab (ENSCHAG00000004313) #22 ss18l2 (ENSCHAG00000004241) GARRE1 (ENSCHAG00000002288) #23 celf1 (ENSCHAG00000001891) ptpmt1 (ENSCHAG00000001853) ndufs3 (ENSCHAG00000001792) ENSCHAG00000001766 ENSCHAG00000001745 ENSCHAG00000001669 ENSCHAG00000001637 ENSCHAG00000001628 c6ast1 (ENSCHAG00000001602) npsn (ENSCHAG00000001561) ENSCHAG00000001524 npsn (ENSCHAG00000001396) c6ast1 (ENSCHAG00000001115) Otophysi ANCESTRAL SPECIES 76 ENSGT00390000014907.A ENSGT00950000183037.A.a ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a.e.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.e.g ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00940000158905 ENSGT00940000155943.a ENSGT00530000063948.b ENSGT00390000004930 ENSGT00940000154745.b ENSGT00940000168208 ENSGT00940000166643 ENSGT00950000183090.A ENSGT00940000178971 ENSGT00940000156218 Characiphysae ANCESTRAL SPECIES 84 ENSGT00390000014907.A ENSGT00950000183037.A.a ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a.e.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.e.g ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00940000158905 ENSGT00940000155943.a ENSGT00530000063948.b ENSGT00390000004930 ENSGT00940000154745.b ENSGT00940000168208 ENSGT00940000166643 ENSGT00950000183090.A ENSGT00940000178971 ENSGT00940000156218 Channel catfish MODERN SPECIES 23 ets1 (ENSIPUG00000009227) KIRREL3 (ENSIPUG00000009294) barx2 (ENSIPUG00000009386) rbm7 (ENSIPUG00000009397) ENSIPUG00000009436 ENSIPUG00000009455 ENSIPUG00000009466 ENSIPUG00000009482 ENSIPUG00000009552 ENSIPUG00000009558 ENSIPUG00000009567 CHST8 (ENSIPUG00000009578) #20 ENSIPUG00000009594 KCTD15 (ENSIPUG00000009640) ENSIPUG00000009666 lsm14a (ENSIPUG00000009720) #22 kiaa0355 (ENSIPUG00000009759) #23 ss18l2 (ENSIPUG00000009811) gpi (ENSIPUG00000009854) #25 wtip (ENSIPUG00000010060) #28 ENSIPUG00000010090 ENSIPUG00000010096 sdr42e1 (ENSIPUG00000010111) thsd4 (ENSIPUG00000010126) ENSIPUG00000010147 ENSIPUG00000010170 larp6 (ENSIPUG00000010187) tm2d3 (ENSIPUG00000010197) tarsl2 (ENSIPUG00000010218) Ulk3 (ENSIPUG00000010283) ENSIPUG00000010401 Characiphysae_b ANCESTRAL SPECIES 85 ENSGT00390000014907.A ENSGT00950000183037.A.a ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a.e.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.e.g ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00940000158905 ENSGT00940000155943.a ENSGT00530000063948.b ENSGT00390000004930 ENSGT00940000154745.b ENSGT00940000168208 ENSGT00940000166643 ENSGT00950000183090.A ENSGT00940000178971 ENSGT00940000156218 Characoidei ANCESTRAL SPECIES 238 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.e.g ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00940000158905 ENSGT00940000155943.a ENSGT00530000063948.b ENSGT00390000004930 ENSGT00940000168208 ENSGT00940000166643 ENSGT00950000183090.A ENSGT00940000178971 ENSGT00940000156218 Mexicana tetra MODERN SPECIES 9 ENSAMXG00000038736 ENSAMXG00000024641 ENSAMXG00000024640 col28a1b (ENSAMXG00000024639) mios (ENSAMXG00000024638) GLCCI1 (ENSAMXG00000042680) ICA1 (ENSAMXG00000024636) ENSAMXG00000038842 THSD7A (ENSAMXG00000024635) ENSAMXG00000030370 pepd (ENSAMXG00000020929) #19 ENSAMXG00000032824 CHST8 (ENSAMXG00000020947) #20 KCTD15 (ENSAMXG00000020953) ENSAMXG00000029195 lsm14ab (ENSAMXG00000032221) #22 ENSAMXG00000042842 ss18l2 (ENSAMXG00000043890) GARRE1 (ENSAMXG00000021005) #23 gpib (ENSAMXG00000021015) #25 wtip (ENSAMXG00000021029) #28 sdr42e1 (ENSAMXG00000029717) nedd4a (ENSAMXG00000021055) PRTG (ENSAMXG00000021079) pygo1 (ENSAMXG00000021119) dnaaf4 (ENSAMXG00000040241) ENSAMXG00000021147 ENSAMXG00000034819 ENSAMXG00000021156 pigb (ENSAMXG00000021163) ENSAMXG00000040153 Red-bellied piranha MODERN SPECIES 106 rfc5 (ENSPNAG00000021444) KSR2 (ENSPNAG00000021534) nos1 (ENSPNAG00000023785) LRRC74B (ENSPNAG00000003797) nipsnap1 (ENSPNAG00000023946) CASTOR1 (ENSPNAG00000023978) spring1 (ENSPNAG00000024017) rnft2 (ENSPNAG00000024051) fbxw8 (ENSPNAG00000024075) tesca (ENSPNAG00000024087) FBXO21 (ENSPNAG00000003810) nf2a (ENSPNAG00000024249) CHST8 (ENSPNAG00000024268) #20 KCTD15 (ENSPNAG00000024286) ENSPNAG00000006850 lsm14ab (ENSPNAG00000024375) #22 ss18l2 (ENSPNAG00000024414) GARRE1 (ENSPNAG00000024462) #23 gpib (ENSPNAG00000003834) #25 wtip (ENSPNAG00000024610) #28 sdr42e1 (ENSPNAG00000024627) nedd4a (ENSPNAG00000024688) PRTG (ENSPNAG00000024772) pygo1 (ENSPNAG00000024784) dnaaf4 (ENSPNAG00000024793) ENSPNAG00000024806 ENSPNAG00000024844 pigb (ENSPNAG00000024867) rab27a (ENSPNAG00000006310) Electric eel MODERN SPECIES 14 cyp1a (ENSEEEG00000004761) ENSEEEG00000004758 CSK (ENSEEEG00000003863) cplx3b (ENSEEEG00000003820) ENSEEEG00000003818 ulk3 (ENSEEEG00000003815) ENSEEEG00000002436 tm2d3 (ENSEEEG00000002356) larp6a (ENSEEEG00000002352) ENSEEEG00000002348 THSD4 (ENSEEEG00000002292) pepd (ENSEEEG00000002182) #19 CHST8 (ENSEEEG00000002171) #20 KCTD15 (ENSEEEG00000002170) ENSEEEG00000002169 lsm14ab (ENSEEEG00000002168) #22 ss18l2 (ENSEEEG00000002167) GARRE1 (ENSEEEG00000002164) #23 gpib (ENSEEEG00000002049) #25 wtip (ENSEEEG00000002043) #28 sdr42e1 (ENSEEEG00000002041) nedd4a (ENSEEEG00000000851) PRTG (ENSEEEG00000000492) pygo1 (ENSEEEG00000000475) dnaaf4 (ENSEEEG00000000463) PIERCE2 (ENSEEEG00000000456) ENSEEEG00000000449 pigb (ENSEEEG00000000390) rab27a (ENSEEEG00000000360) ENSEEEG00000000354 ENSEEEG00000000335 Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES 148 ENSGT00950000183129.b.b.b ENSGT00390000008859.b.d.q ENSGT00390000007946.i.b ENSGT00390000007946.j ENSGT00940000154743.B.o.a ENSGT00390000007235 ENSGT00940000156195.q.b ENSGT00940000164678.a ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.e.g ENSGT00940000154415.lb.a.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00940000158905 ENSGT00940000155943.a ENSGT00530000063948.b ENSGT00390000004930 ENSGT00940000168208 ENSGT00940000166643 ENSGT00950000183090.A ENSGT00940000178971 ENSGT00940000156218 ENSGT00940000155174.f Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 337 ENSGT01030000234621.C.a.a.b.g ENSGT00510000046732.A.d.b ENSGT00940000165320 ENSGT00390000008610.a.a.d ENSGT00940000160762 ENSGT00390000010128.z ENSGT00390000011958.v ENSGT00530000064411.a.a ENSGT00390000010063.rb ENSGT00530000063816.c.b.b ENSGT00950000182988.a.b.a.c ENSGT00940000154743.B.o.a.h ENSGT00940000156195.q.b.h ENSGT00940000159100.g.e.a #20 ENSGT00940000159496.k.d.b ENSGT00940000154415.lb.a.a.a #22 ENSGT00390000003210.d #23 ENSGT00390000000707.y.b.a #25 ENSGT00940000160924.d #28 ENSGT00940000155943.a.c ENSGT00390000004930 ENSGT00940000168208 ENSGT00940000166643.c ENSGT00950000183090.A ENSGT00940000156218.k.b ENSGT00940000155174.f.`b.a ENSGT00940000158330.x ENSGT00940000156155.i ENSGT00940000156536.e.a.i.a ENSGT00390000007946.j.e Cyprininae_a ANCESTRAL SPECIES 25 ENSGT01030000234621.C.a.a.b.g ENSGT00510000046732.A.d.b ENSGT00940000165320 ENSGT00390000008610.a.a.d ENSGT00940000160762 ENSGT00390000010128.z ENSGT00390000011958.v ENSGT00530000064411.a.a ENSGT00390000010063.rb ENSGT00530000063816.c.b.b ENSGT00950000182988.a.b.a.c ENSGT00940000154743.B.o.a.h ENSGT00940000156195.q.b.h ENSGT00940000159100.g.e.a #20 ENSGT00940000159496.k.d.b ENSGT00940000154415.lb.a.a.a #22 ENSGT00390000003210.d #23 ENSGT00390000000707.y.b.a #25 ENSGT00940000160924.d #28 ENSGT00940000155943.a.c ENSGT00390000004930 ENSGT00940000168208 ENSGT00940000166643.c ENSGT00950000183090.A ENSGT00940000156218.k.b ENSGT00940000155174.f.`b.a ENSGT00390000010760.e.b.d.b.b ENSGT00940000158330.x ENSGT00940000156155.i ENSGT00940000156536.e.a.i.a ENSGT00390000007946.j.e Common carp reference MODERN SPECIES 19 ENSCCRG00000077876 ENSCCRG00000018459 rps3 (ENSCCRG00000018907) INTS4 (ENSCCRG00000018932) aamdc (ENSCCRG00000018471) RSF1 (ENSCCRG00000054713) clns1a (ENSCCRG00000067103) aqp11 (ENSCCRG00000076976) pak1 (ENSCCRG00000025855) ENSCCRG00000073550 nptnb (ENSCCRG00000002739) PEPD (ENSCCRG00000079116) #19 CHST8 (ENSCCRG00000074768) #20 KCTD15 (ENSCCRG00000082235) ENSCCRG00000049526 #23 lsm14ab (ENSCCRG00000049558) #22 ENSCCRG00000049696 gpib (ENSCCRG00000049335) #25 wtip (ENSCCRG00000082254) #28 nedd4a (ENSCCRG00000002006) PRTG (ENSCCRG00000007016) ENSCCRG00000049324 dnaaf4 (ENSCCRG00000049321) ENSCCRG00000076844 ENSCCRG00000001448 pigb (ENSCCRG00000001478) rab27a (ENSCCRG00000071795) ENSCCRG00000075572 ENSCCRG00000075535 ENSCCRG00000030101 ENSCCRG00000030120 Golden-line barbel MODERN SPECIES 181 rps3 (ENSSGRG00000045989) KCTD14 (ENSSGRG00000046043) INTS4 (ENSSGRG00000046050) aamdc (ENSSGRG00000046192) RSF1 (ENSSGRG00000046193) clns1a (ENSSGRG00000046196) aqp11 (ENSSGRG00000046199) pak1 (ENSSGRG00000046226) ENSSGRG00000047932 nptnb (ENSSGRG00000047934) ugt5f1 (ENSSGRG00000047935) pepd (ENSSGRG00000047937) #19 CHST8 (ENSSGRG00000047938) #20 KCTD15 (ENSSGRG00000047940) ENSSGRG00000047943 lsm14ab (ENSSGRG00000047947) #22 ENSSGRG00000047955 #22 ss18l2 (ENSSGRG00000047956) GARRE1 (ENSSGRG00000047958) #23 gpib (ENSSGRG00000048206) #25 wtip (ENSSGRG00000048318) #28 nedd4a (ENSSGRG00000048326) Cyprininae ANCESTRAL SPECIES 243 ENSGT00390000007946.j.f ENSGT00940000154743.B.o.a.g ENSGT00390000007235 ENSGT00940000156195.q.b.g ENSGT00940000164678.a.g ENSGT00940000153657.B.n #19 ENSGT00940000159100.g.e.b #20 ENSGT00940000159496.k.d.a ENSGT00390000011620.b.e.g.b ENSGT00940000164678.a.h ENSGT00940000153657.B.m #19 ENSGT00940000159100.g.f #20 ENSGT00940000159496.k.c ENSGT00390000011620.b.e.g.a ENSGT00940000154415.lb.a.a.b #22 ENSGT00940000160407 ENSGT00390000003210.c #23 ENSGT00390000000707.y.b.b #25 ENSGT00940000160924.c #28 ENSGT00940000158070 ENSGT00940000158905 ENSGT00940000155943.a.d ENSGT00530000063948.b ENSGT00940000166643.d ENSGT00940000156218.k.a ENSGT00940000155174.f.`b.b ENSGT00390000010760.e.b.c.a ENSGT00390000010760.e.b.d.b.a ENSGT00940000158330.w ENSGT00940000161729.m.b.e.b Cyprininae_a ANCESTRAL SPECIES 70 ENSGT00390000007946.j.f ENSGT00940000154743.B.o.a.g ENSGT00940000156195.q.b.g ENSGT00940000164678.a.g ENSGT00940000153657.B.n #19 ENSGT00940000159100.g.e.b #20 ENSGT00940000159496.k.d.a ENSGT00390000011620.b.e.g.b ENSGT00940000164678.a.h ENSGT00940000153657.B.m #19 ENSGT00940000159100.g.f #20 ENSGT00940000159496.k.c ENSGT00390000011620.b.e.g.a ENSGT00940000154415.lb.a.a.b #22 ENSGT00940000160407 ENSGT00390000003210.c #23 ENSGT00390000000707.y.b.b #25 ENSGT00940000160924.c #28 ENSGT00940000158070 ENSGT00940000158905 ENSGT00940000155943.a.d ENSGT00530000063948.b ENSGT00940000156218.k.a ENSGT00940000155174.f.`b.b ENSGT00390000010760.e.b.c.a ENSGT00390000010760.e.b.d.b.a ENSGT00940000158330.w ENSGT00940000162467.a.a ENSGT00730000111053 Common carp reference MODERN SPECIES 9 ENSCCRG00000064040 cox5ab (ENSCCRG00000026572) rpp25b (ENSCCRG00000071304) ENSCCRG00000058772 ENSCCRG00000057392 ENSCCRG00000047888 REC114 (ENSCCRG00000080610) HCN4 (ENSCCRG00000065953) nptnb (ENSCCRG00000068320) ugt5f1 (ENSCCRG00000010451) pepd (ENSCCRG00000060170) #19 CHST8 (ENSCCRG00000005285) #20 KCTD15 (ENSCCRG00000075707) ENSCCRG00000068231 ENSCCRG00000058062 lsm14ab (ENSCCRG00000078995) #22 ss18l2 (ENSCCRG00000057143) ENSCCRG00000060913 #23 gpib (ENSCCRG00000082874) #25 wtip (ENSCCRG00000080362) #28 sdr42e1 (ENSCCRG00000054370) nedd4a (ENSCCRG00000002187) PRTG (ENSCCRG00000001981) PYGO1 (ENSCCRG00000013209) ENSCCRG00000076556 ENSCCRG00000058915 pigb (ENSCCRG00000021788) ENSCCRG00000021785 ENSCCRG00000056199 ENSCCRG00000074708 ENSCCRG00000039023 Golden-line barbel MODERN SPECIES 13 KCTD15 (ENSSGRG00000037210) ENSSGRG00000037209 lsm14ab (ENSSGRG00000037204) #22 GARRE1 (ENSSGRG00000037073) #23 gpib (ENSSGRG00000036946) #25 wtip (ENSSGRG00000036934) #28 sdr42e1 (ENSSGRG00000036933) nedd4a (ENSSGRG00000036932) ENSSGRG00000036929 PRTG (ENSSGRG00000036928) pygo1 (ENSSGRG00000036927) ccpg1 (ENSSGRG00000036926) rab27a (ENSSGRG00000036917) UNC13C (ENSSGRG00000034987) si:dkey-14d8.7 (ENSSGRG00000034969) ENSSGRG00000034968 LRCH3 (ENSSGRG00000034687) dcun1d5 (ENSSGRG00000034629) Goldfish DUPLICATION Goldfish MODERN SPECIES 9 ENSCARG00000011707 ENSCARG00000011615 KCTD14 (ENSCARG00000011600) INTS4 (ENSCARG00000010795) aamdc (ENSCARG00000010749) RSF1 (ENSCARG00000010736) clns1a (ENSCARG00000010708) aqp11 (ENSCARG00000010698) ENSCARG00000010691 pak1 (ENSCARG00000010506) nptnb (ENSCARG00000010456) ENSCARG00000010229 CHST8 (ENSCARG00000010190) #20 KCTD15 (ENSCARG00000010178) ENSCARG00000010168 lsm14ab (ENSCARG00000010099) #22 GARRE1 (ENSCARG00000010023) #23 gpib (ENSCARG00000009953) #25 wtip (ENSCARG00000009919) #28 nedd4a (ENSCARG00000006092) PRTG (ENSCARG00000005754) dnaaf4 (ENSCARG00000005696) ENSCARG00000005683 ENSCARG00000005667 rab27a (ENSCARG00000005637) UNC13C (ENSCARG00000005225) LRCH3 (ENSCARG00000005054) serp1 (ENSCARG00000005005) dcun1d5 (ENSCARG00000004974) capn5a (ENSCARG00000004746) dhdh.1 (ENSCARG00000004684) Goldfish MODERN SPECIES 37 PARP6 (ENSCARG00000031840) pkma (ENSCARG00000032317) dhdh.1 (ENSCARG00000032777) HCN4 (ENSCARG00000032800) ENSCARG00000032822 nptnb (ENSCARG00000032834) ugt5f1 (ENSCARG00000032842) pepd (ENSCARG00000032929) #19 nptnb (ENSCARG00000035160) rffl (ENSCARG00000035171) ENSCARG00000035189 ENSCARG00000035190 CHST8 (ENSCARG00000035195) #20 KCTD15 (ENSCARG00000035206) ENSCARG00000035226 lsm14ab (ENSCARG00000035248) #22 ss18l2 (ENSCARG00000035267) GARRE1 (ENSCARG00000035275) #23 wtip (ENSCARG00000035320) #28 sdr42e1 (ENSCARG00000035335) nedd4a (ENSCARG00000035374) PRTG (ENSCARG00000038121) pygo1 (ENSCARG00000038302) ENSCARG00000038323 rab27a (ENSCARG00000038350) ENSCARG00000038371 UNC13C (ENSCARG00000038514) cdh7a (ENSCARG00000039408) si:dkey-14d8.7 (ENSCARG00000039452) ENSCARG00000053433 ENSCARG00000053519 Zebrafish MODERN SPECIES 9 homer2 (ENSDARG00000059349) ENSDARG00000103011 pde8a (ENSDARG00000087941) gatm (ENSDARG00000036239) zgc:158482 (ENSDARG00000067520) slc27a2a (ENSDARG00000036237) hdc (ENSDARG00000075454) gabpb1 (ENSDARG00000023659) USP8 (ENSDARG00000063719) trpm7 (ENSDARG00000036232) larp6a (ENSDARG00000005355) tm2d3 (ENSDARG00000076618) ENSDARG00000092774 lsm14ab (ENSDARG00000100553) #22 ss18l2 (ENSDARG00000101085) GARRE1 (ENSDARG00000105288) #23 ENSDARG00000102796 #23 gpib (ENSDARG00000103826) #25 wtip (ENSDARG00000103607) #28 sdr42e1 (ENSDARG00000098838) nedd4a (ENSDARG00000099843) ENSDARG00000100044 ENSDARG00000116666 CELF6 (ENSDARG00000101933) rpp25b (ENSDARG00000112256) cox5ab (ENSDARG00000099663) fam219b (ENSDARG00000104637) parp6a (ENSDARG00000042703) pkma (ENSDARG00000099730) Cyprinoidei ANCESTRAL SPECIES ENSGT00940000154415.lb.a.b #22 Cyprininae ANCESTRAL SPECIES ENSGT00940000154415.lb.a.b #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000154415.lb.a.b #22 Golden-line barbel MODERN SPECIES 181 KCTD14 (ENSSGRG00000046043) INTS4 (ENSSGRG00000046050) aamdc (ENSSGRG00000046192) RSF1 (ENSSGRG00000046193) clns1a (ENSSGRG00000046196) aqp11 (ENSSGRG00000046199) pak1 (ENSSGRG00000046226) ENSSGRG00000047932 nptnb (ENSSGRG00000047934) ugt5f1 (ENSSGRG00000047935) pepd (ENSSGRG00000047937) #19 CHST8 (ENSSGRG00000047938) #20 KCTD15 (ENSSGRG00000047940) ENSSGRG00000047943 lsm14ab (ENSSGRG00000047947) #22 ENSSGRG00000047955 #22 ss18l2 (ENSSGRG00000047956) GARRE1 (ENSSGRG00000047958) #23 gpib (ENSSGRG00000048206) #25 wtip (ENSSGRG00000048318) #28 nedd4a (ENSSGRG00000048326) Euteleosteomorpha ANCESTRAL SPECIES 3 ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00940000178010 ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Protacanthopterygii ANCESTRAL SPECIES 2 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B.l #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301.k ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00600000085600.k ENSGT00940000160934 ENSGT00390000018123.a.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 191 ENSGT00390000016435.g.b.a ENSGT00390000016435.g.b.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a.g ENSGT00390000001195.b ENSGT00940000157689.h ENSGT00940000154969.a ENSGT00940000158389.d ENSGT00940000159103.i.a ENSGT00940000157011.o ENSGT00940000156594 ENSGT00940000153657.B.l.b #19 ENSGT00940000159100.g.h #20 ENSGT00940000159496.k.a ENSGT00390000011620.b.f ENSGT00940000154415.lb.a.c #22 ENSGT00940000154415.lb.a.d #22 ENSGT00940000160407 ENSGT00390000003210.g #23 ENSGT00390000003210.h #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070.c ENSGT00940000158070.d ENSGT00390000012054.b.l ENSGT00390000008576.x ENSGT00390000012529.p ENSGT00940000158301.k.a.b.b ENSGT00940000159096.l.a ENSGT00950000183170.a.lb ENSGT00440000033589.c.d.b Huchen MODERN SPECIES 1924 lsm14ab (ENSHHUG00000009946) #22 ss18l2 (ENSHHUG00000009941) GARRE1 (ENSHHUG00000009875) #23 gpib (ENSHHUG00000009806) #25 wtip (ENSHHUG00000009794) #28 sdr42e1 (ENSHHUG00000009692) ENSHHUG00000009678 cnep1r1 (ENSHHUG00000009575) heatr3 (ENSHHUG00000009497) tent4b (ENSHHUG00000009484) adcy7 (ENSHHUG00000009475) ENSHHUG00000009482 Salmoninae_a ANCESTRAL SPECIES 110 ENSGT00940000154666.o.a ENSGT00940000157584.a.b.a ENSGT00940000157939.c.a ENSGT00950000183017.b.a.b.a ENSGT00390000014907.A.h ENSGT00950000183037.A.a.m ENSGT00390000016435.g.b.b ENSGT00940000154969.a.l ENSGT00940000158389.d ENSGT00940000159103.i.a ENSGT00940000157011.o ENSGT00940000156594.q.a.b ENSGT00940000153657.B.l.b #19 ENSGT00940000159100.g.h.b #20 ENSGT00940000159496.k.b ENSGT00940000154415.lb.a.c #22 Oncorhynchus ANCESTRAL SPECIES 96 ENSGT00940000157689.h.b ENSGT00940000154969.a.l ENSGT00940000158389.d ENSGT00940000159103.i.a ENSGT00940000157011.o ENSGT00940000156594.q.a.b ENSGT00940000153657.B.l.b #19 ENSGT00940000159100.g.h.b #20 ENSGT00940000159496.k.b ENSGT00390000011620.b.f.e.b ENSGT00940000159496.k.a.b ENSGT00390000011620.b.f.e.a ENSGT00940000154415.lb.a.c #22 ENSGT00390000003210.h #23 ENSGT00390000000707.y.b.d #25 ENSGT00940000160924.g #28 ENSGT00940000158070.d ENSGT00390000012054.b.l ENSGT00390000008576.x ENSGT00390000012529.p ENSGT00940000158301.k.a.b.b ENSGT00940000159096.l.a ENSGT00950000183170.a.lb ENSGT00440000033589.c.d.b ENSGT00600000085600.k.b.b ENSGT00940000160934 ENSGT00390000018123.a.a.k ENSGT00940000155938.b.a.e Oncorhynchus_a ANCESTRAL SPECIES 145 ENSGT00940000154415.lb.a.c #22 ENSGT00390000003210.h #23 ENSGT00390000000707.y.b.d #25 ENSGT00940000160924.g #28 ENSGT00940000158070.d ENSGT00390000012054.b.l ENSGT00390000008576.x ENSGT00390000012529.p ENSGT00940000158301.k.a.b.b ENSGT00940000159096.l.a ENSGT00950000183170.a.lb ENSGT00440000033589.c.d.a.b ENSGT00600000085600.k.b.b ENSGT00940000160934 ENSGT00390000018123.a.a.k ENSGT00940000155938.b.a.e Chinook salmon MODERN SPECIES 28 ENSOTSG00005014159 lsm14ab (ENSOTSG00005014161) #22 ss18l2 (ENSOTSG00005014163) GARRE1 (ENSOTSG00005014169) #23 gpib (ENSOTSG00005014300) #25 wtip (ENSOTSG00005014529) #28 sdr42e1 (ENSOTSG00005014530) ENSOTSG00005014531 cnep1r1 (ENSOTSG00005014532) heatr3 (ENSOTSG00005014538) tent4b (ENSOTSG00005014800) adcy7 (ENSOTSG00005014877) ENSOTSG00005014878 nkd1 (ENSOTSG00005014565) brd7 (ENSOTSG00005014571) lsm14ab (ENSOTSG00005014575) #22 GARRE1 (ENSOTSG00005014577) #23 gpib (ENSOTSG00005014822) #25 wtip (ENSOTSG00005014883) #28 sdr42e1 (ENSOTSG00005014884) zgc:101040 (ENSOTSG00005014885) cnep1r1 (ENSOTSG00005014887) heatr3 (ENSOTSG00005014936) tent4b (ENSOTSG00005015148) adcy7 (ENSOTSG00005015157) brd7 (ENSOTSG00005015339) nkd1 (ENSOTSG00005015340) ACVR1B (ENSOTSG00005015342) sall1a (ENSOTSG00005015346) ENSOTSG00005015349 ENSOTSG00005015351 Coho salmon MODERN SPECIES 22 EDC3 (ENSOKIG00005020136) CSK (ENSOKIG00005020163) CPLX3 (ENSOKIG00005020332) ENSOKIG00005020342 ULK3 (ENSOKIG00005020358) ENSOKIG00005020546 TM2D3 (ENSOKIG00005023453) larp6a (ENSOKIG00005023462) ENSOKIG00005023479 THSD4 (ENSOKIG00005023548) PEPD (ENSOKIG00005023586) #19 CHST8 (ENSOKIG00005023619) #20 KCTD15 (ENSOKIG00005023630) ENSOKIG00005023655 ENSOKIG00005023717 lsm14ab (ENSOKIG00005023723) #22 GARRE1 (ENSOKIG00005023767) #23 gpib (ENSOKIG00005024131) #25 wtip (ENSOKIG00005025898) #28 sdr42e1 (ENSOKIG00005025953) ENSOKIG00005025972 cnep1r1 (ENSOKIG00005025982) heatr3 (ENSOKIG00005026183) tent4b (ENSOKIG00005026275) adcy7 (ENSOKIG00005026527) brd7 (ENSOKIG00005027019) nkd1 (ENSOKIG00005027105) ENSOKIG00005027171 nod2 (ENSOKIG00005027272) CYLD (ENSOKIG00005027605) sall1a (ENSOKIG00005031002) Rainbow trout MODERN SPECIES 27 ENSOMYG00000069182 ENSOMYG00000030182 ULK3 (ENSOMYG00000030257) ENSOMYG00000030868 ENSOMYG00000051224 ENSOMYG00000032254 larp6a (ENSOMYG00000032260) ENSOMYG00000032307 THSD4 (ENSOMYG00000032435) PEPD (ENSOMYG00000032588) #19 ENSOMYG00000053833 CHST8 (ENSOMYG00000032739) #20 ENSOMYG00000061695 KCTD15 (ENSOMYG00000032775) ENSOMYG00000072260 lsm14ab (ENSOMYG00000032834) #22 ENSOMYG00000032844 ENSOMYG00000072031 ENSOMYG00000032931 #23 gpib (ENSOMYG00000033529) #25 wtip (ENSOMYG00000038482) #28 ENSOMYG00000052145 sdr42e1 (ENSOMYG00000038513) ENSOMYG00000038543 CNEP1R1 (ENSOMYG00000038555) heatr3 (ENSOMYG00000038743) ENSOMYG00000070463 tent4b (ENSOMYG00000039746) adcy7 (ENSOMYG00000039924) brd7 (ENSOMYG00000039999) nkd1 (ENSOMYG00000040009) Salmo ANCESTRAL SPECIES 30 ENSGT00950000183037.A.a.m ENSGT00390000016435.g.b.b ENSGT00940000157431.c.b.k ENSGT00950000182938.b.b.b.b.a.h ENSGT00390000001195.b.d ENSGT00940000157689.h ENSGT00940000154969.a.l ENSGT00940000158389.d ENSGT00940000159103.i.a ENSGT00940000157011.o ENSGT00940000156594.q.a.b ENSGT00940000153657.B.l.b #19 ENSGT00940000159100.g.h.a.b #20 ENSGT00940000159496.k.a.a ENSGT00390000011620.b.f.d ENSGT00940000154415.lb.a.c #22 River trout MODERN SPECIES 21 cyp1a (ENSSTUG00000014252) edc3 (ENSSTUG00000014245) CSK (ENSSTUG00000014136) CPLX3 (ENSSTUG00000014129) ENSSTUG00000014125 ulk3 (ENSSTUG00000014112) ENSSTUG00000013204 tm2d3 (ENSSTUG00000013156) larp6a (ENSSTUG00000013139) LRRC49 (ENSSTUG00000013110) THSD4 (ENSSTUG00000012959) pepd (ENSSTUG00000012737) #19 CHST8 (ENSSTUG00000012725) #20 KCTD15 (ENSSTUG00000012700) ENSSTUG00000012684 lsm14ab (ENSSTUG00000012670) #22 ENSSTUG00000012664 ss18l2 (ENSSTUG00000012649) GARRE1 (ENSSTUG00000012499) #23 gpib (ENSSTUG00000011999) #25 wtip (ENSSTUG00000011912) #28 sdr42e1 (ENSSTUG00000011892) ENSSTUG00000011888 cnep1r1 (ENSSTUG00000011844) heatr3 (ENSSTUG00000011779) tent4b (ENSSTUG00000011736) adcy7 (ENSSTUG00000011554) brd7 (ENSSTUG00000011513) nkd1 (ENSSTUG00000011467) ENSSTUG00000011376 nod2 (ENSSTUG00000011203) Atlantic salmon MODERN SPECIES 18 ENSSSAG00000120568 ENSSSAG00000071998 ENSSSAG00000108856 CSK (ENSSSAG00000072036) ENSSSAG00000112317 ENSSSAG00000093940 ULK3 (ENSSSAG00000073071) ENSSSAG00000073120 LARP6 (ENSSSAG00000120564) ENSSSAG00000074208 THSD4 (ENSSSAG00000074252) PEPD (ENSSSAG00000074360) #19 CHST8 (ENSSSAG00000073195) #20 KCTD15 (ENSSSAG00000109785) ENSSSAG00000074871 lsm14ab (ENSSSAG00000074874) #22 ENSSSAG00000074889 #23 gpib (ENSSSAG00000075638) #25 wtip (ENSSSAG00000075726) #28 ENSSSAG00000075733 sdr42e1 (ENSSSAG00000075732) CNEP1R1 (ENSSSAG00000075734) heatr3 (ENSSSAG00000075741) tent4b (ENSSSAG00000075793) adcy7 (ENSSSAG00000075964) ENSSSAG00000117108 brd7 (ENSSSAG00000076002) ENSSSAG00000044538 ENSSSAG00000094857 ENSSSAG00000100978 nkd1 (ENSSSAG00000076011) Salmoninae ANCESTRAL SPECIES 191 ENSGT00390000016435.g.b.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a.g ENSGT00390000001195.b ENSGT00940000157689.h ENSGT00940000154969.a ENSGT00940000158389.d ENSGT00940000159103.i.a ENSGT00940000157011.o ENSGT00940000156594 ENSGT00940000153657.B.l.b #19 ENSGT00940000159100.g.h #20 ENSGT00940000159496.k.a ENSGT00390000011620.b.f ENSGT00940000154415.lb.a.c #22 ENSGT00940000154415.lb.a.d #22 ENSGT00940000160407 ENSGT00390000003210.g #23 ENSGT00390000003210.h #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070.c ENSGT00940000158070.d ENSGT00390000012054.b.l ENSGT00390000008576.x ENSGT00390000012529.p ENSGT00940000158301.k.a.b.b ENSGT00940000159096.l.a ENSGT00950000183170.a.lb ENSGT00440000033589.c.d.b ENSGT00600000085600.k.b Huchen MODERN SPECIES 499 nrxn3a (ENSHHUG00000052779) CHST8 (ENSHHUG00000052783) #20 KCTD15 (ENSHHUG00000052787) ENSHHUG00000052788 ENSHHUG00000052789 lsm14ab (ENSHHUG00000052790) #22 ss18l2 (ENSHHUG00000052791) GARRE1 (ENSHHUG00000052792) #23 gpib (ENSHHUG00000052795) #25 wtip (ENSHHUG00000052809) #28 sdr42e1 (ENSHHUG00000052810) ENSHHUG00000052811 cnep1r1 (ENSHHUG00000052812) heatr3 (ENSHHUG00000052815) tent4b (ENSHHUG00000052826) adcy7 (ENSHHUG00000052827) brd7 (ENSHHUG00000052835) ENSHHUG00000052839 Salmoninae_a ANCESTRAL SPECIES 108 ENSGT00950000182938.b.b.b.b.a.g ENSGT00390000001195.b ENSGT00940000157689.h ENSGT00940000157689.g ENSGT00940000154969.a.k ENSGT00940000158389.c ENSGT00940000159103.i.b ENSGT00940000157011.p ENSGT00940000156594.q.a.a ENSGT00940000153657.B.l.a #19 ENSGT00940000159100.g.h.a.a #20 ENSGT00940000159496.k.a.b ENSGT00940000159100.g.h.a.b #20 ENSGT00940000159496.k.a.a ENSGT00390000011620.b.f ENSGT00940000154415.lb.a.d #22 ENSGT00940000160407 ENSGT00390000003210.g #23 ENSGT00390000000707.y.b.c #25 ENSGT00390000003210.h #23 ENSGT00390000000707.y.b.d #25 ENSGT00940000160924.g #28 ENSGT00940000158070.d ENSGT00390000012054.b.l ENSGT00390000008576.x ENSGT00390000012529.p ENSGT00940000158301.k.a.b.b ENSGT00940000159096.l.a ENSGT00950000183170.a.lb ENSGT00440000033589.c.d.b ENSGT00600000085600.k.a.a Salmo ANCESTRAL SPECIES 27 ENSGT00950000183037.A.a.n ENSGT00390000016435.g.b.a ENSGT00940000157431.c.b.l ENSGT00950000182938.b.b.b.b.a.g ENSGT00390000001195.b.c ENSGT00940000157689.g ENSGT00940000154969.a.k ENSGT00940000158389.c ENSGT00940000159103.i.b ENSGT00940000157011.p ENSGT00940000156594.q.a.a ENSGT00940000153657.B.l.a.c #19 ENSGT00940000159100.g.h.a.a #20 ENSGT00940000159496.k.a.b ENSGT00390000011620.b.f.c ENSGT00940000154415.lb.a.d #22 ENSGT00940000160407 ENSGT00390000003210.g #23 ENSGT00390000000707.y.b.c #25 ENSGT00390000003210.h #23 ENSGT00390000000707.y.b.d #25 ENSGT00940000160924.g #28 ENSGT00940000158070.d ENSGT00390000012054.b.l ENSGT00390000008576.x ENSGT00390000012529.o.b ENSGT00940000158301.k.a.b.b ENSGT00940000159096.l.b ENSGT00940000159096.k.d ENSGT00950000183170.a.lb ENSGT00440000033589.c.d.b Atlantic salmon MODERN SPECIES 2 ENSSSAG00000069730 CSK (ENSSSAG00000069755) ENSSSAG00000069804 ENSSSAG00000102767 ULK3 (ENSSSAG00000069810) ENSSSAG00000069929 LARP6 (ENSSSAG00000085053) ENSSSAG00000072187 THSD4 (ENSSSAG00000072217) PEPD (ENSSSAG00000072353) #19 ENSSSAG00000089390 CHST8 (ENSSSAG00000117146) #20 KCTD15 (ENSSSAG00000101194) ENSSSAG00000089717 ENSSSAG00000102137 lsm14ab (ENSSSAG00000073236) #22 ss18l2 (ENSSSAG00000073240) ENSSSAG00000073282 #23 gpib (ENSSSAG00000073713) #25 ENSSSAG00000092160 ENSSSAG00000113984 wtip (ENSSSAG00000120503) #28 sdr42e1 (ENSSSAG00000056349) ENSSSAG00000073870 CNEP1R1 (ENSSSAG00000088240) heatr3 (ENSSSAG00000073878) tent4b (ENSSSAG00000073902) adcy7 (ENSSSAG00000073930) brd7 (ENSSSAG00000074265) nkd1 (ENSSSAG00000119359) ENSSSAG00000090673 River trout MODERN SPECIES 3 CSK (ENSSTUG00000026034) CPLX3 (ENSSTUG00000026263) ENSSTUG00000026275 ulk3 (ENSSTUG00000026292) ENSSTUG00000026494 tm2d3 (ENSSTUG00000027568) larp6a (ENSSTUG00000027574) ENSSTUG00000027586 ENSSTUG00000027599 ENSSTUG00000027606 THSD4 (ENSSTUG00000027616) pepd (ENSSTUG00000027784) #19 CHST8 (ENSSTUG00000027963) #20 KCTD15 (ENSSTUG00000027975) ENSSTUG00000028036 lsm14ab (ENSSTUG00000028072) #22 ss18l2 (ENSSTUG00000028083) GARRE1 (ENSSTUG00000028148) #23 gpib (ENSSTUG00000028424) #25 wtip (ENSSTUG00000029159) #28 sdr42e1 (ENSSTUG00000029228) ENSSTUG00000029239 cnep1r1 (ENSSTUG00000029243) heatr3 (ENSSTUG00000029289) tent4b (ENSSTUG00000029441) adcy7 (ENSSTUG00000029762) brd7 (ENSSTUG00000030480) nkd1 (ENSSTUG00000030492) ENSSTUG00000030509 ENSSTUG00000030516 CYLD (ENSSTUG00000030594) Oncorhynchus ANCESTRAL SPECIES ENSGT00950000183037.A.a.m ENSGT00390000016435.g.b.b ENSGT00940000157431.c.b.m ENSGT00950000182938.b.b.b.b.a.g.a ENSGT00390000001195.b.f ENSGT00940000157689.h.a ENSGT00940000154969.a.k ENSGT00940000158389.c ENSGT00940000159103.i.b ENSGT00940000157011.p ENSGT00940000156594.q.a.a ENSGT00940000153657.B.l.a #19 ENSGT00940000159100.g.h.a.a #20 ENSGT00940000159496.k.a.a ENSGT00390000011620.b.f.f ENSGT00940000154415.lb.a.d #22 ENSGT00940000160407 ENSGT00390000003210.g #23 ENSGT00390000000707.y.b.c #25 ENSGT00940000160924.h #28 ENSGT00940000158070.c ENSGT00390000012054.b.k ENSGT00390000008576.w ENSGT00390000012529.o.a ENSGT00940000158301.k.a.a ENSGT00940000159096.k ENSGT00950000183170.a.mb ENSGT00440000033589.c.d.a.a ENSGT00440000033589.c.d.a.b ENSGT00600000085600.k.b.a ENSGT00390000018123.a.a.l Rainbow trout MODERN SPECIES 18 ENSOMYG00000041635 ENSOMYG00000041614 CSK (ENSOMYG00000041698) ENSOMYG00000042415 ENSOMYG00000042418 ULK3 (ENSOMYG00000042424) ENSOMYG00000042656 ENSOMYG00000044733 larp6a (ENSOMYG00000044740) ENSOMYG00000044746 THSD4 (ENSOMYG00000044758) PEPD (ENSOMYG00000044815) #19 CHST8 (ENSOMYG00000044939) #20 KCTD15 (ENSOMYG00000044944) ENSOMYG00000044957 lsm14ab (ENSOMYG00000044968) #22 ss18l2 (ENSOMYG00000044973) ENSOMYG00000044986 #23 gpib (ENSOMYG00000045032) #25 wtip (ENSOMYG00000045094) #28 ENSOMYG00000053452 sdr42e1 (ENSOMYG00000045098) ENSOMYG00000074522 CNEP1R1 (ENSOMYG00000045101) heatr3 (ENSOMYG00000045138) tent4b (ENSOMYG00000045259) adcy7 (ENSOMYG00000045295) ENSOMYG00000066122 brd7 (ENSOMYG00000045334) nkd1 (ENSOMYG00000045343) ENSOMYG00000045354 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00390000016435.g.b.b ENSGT00940000157431.c.b.m ENSGT00950000182938.b.b.b.b.a.g.a ENSGT00390000001195.b.f ENSGT00940000157689.h.a ENSGT00940000157689.g ENSGT00940000154969.a.k ENSGT00940000158389.c ENSGT00940000159103.i.b ENSGT00940000157011.p ENSGT00940000156594.q.a.a ENSGT00940000153657.B.l.a #19 ENSGT00940000159100.g.h.a.a #20 ENSGT00940000159496.k.a.a ENSGT00390000011620.b.f.f ENSGT00940000154415.lb.a.d #22 ENSGT00940000160407 ENSGT00390000003210.g #23 ENSGT00390000000707.y.b.c #25 ENSGT00940000160924.h #28 ENSGT00940000158070.c ENSGT00390000012054.b.k ENSGT00390000008576.w ENSGT00390000012529.o.a ENSGT00940000158301.k.a.a ENSGT00950000183170.a.mb ENSGT00440000033589.c.d.a.a ENSGT00600000085600.k.b.a ENSGT00390000018123.a.a.l ENSGT00940000155938.b.a.f ENSGT00950000183135.A.b.r.f Chinook salmon MODERN SPECIES 28 edc3 (ENSOTSG00005009124) CSK (ENSOTSG00005009131) ENSOTSG00005009432 ENSOTSG00005009435 ulk3 (ENSOTSG00005009437) ENSOTSG00005009446 tm2d3 (ENSOTSG00005014137) larp6a (ENSOTSG00005014138) ENSOTSG00005014139 THSD4 (ENSOTSG00005014141) pepd (ENSOTSG00005014150) #19 CHST8 (ENSOTSG00005014151) #20 CHST8 (ENSOTSG00005014154) #20 KCTD15 (ENSOTSG00005014157) ENSOTSG00005014159 lsm14ab (ENSOTSG00005014161) #22 ss18l2 (ENSOTSG00005014163) GARRE1 (ENSOTSG00005014169) #23 gpib (ENSOTSG00005014300) #25 wtip (ENSOTSG00005014529) #28 sdr42e1 (ENSOTSG00005014530) ENSOTSG00005014531 cnep1r1 (ENSOTSG00005014532) heatr3 (ENSOTSG00005014538) tent4b (ENSOTSG00005014800) adcy7 (ENSOTSG00005014877) ENSOTSG00005014878 nkd1 (ENSOTSG00005014565) brd7 (ENSOTSG00005014571) lsm14ab (ENSOTSG00005014575) #22 GARRE1 (ENSOTSG00005014577) #23 Coho salmon MODERN SPECIES 28 CSK (ENSOKIG00005013791) CPLX3 (ENSOKIG00005014213) ENSOKIG00005014222 ENSOKIG00005014227 ulk3 (ENSOKIG00005014235) ENSOKIG00005014343 tm2d3 (ENSOKIG00005015908) larp6a (ENSOKIG00005015918) LRRC49 (ENSOKIG00005015954) THSD4 (ENSOKIG00005016391) ENSOKIG00005016545 pepd (ENSOKIG00005016584) #19 CHST8 (ENSOKIG00005017251) #20 KCTD15 (ENSOKIG00005017258) ENSOKIG00005017277 ENSOKIG00005017295 #22 ss18l2 (ENSOKIG00005017299) ENSOKIG00005017313 #23 ENSOKIG00005017323 #23 gpib (ENSOKIG00005017356) #25 wtip (ENSOKIG00005017960) #28 sdr42e1 (ENSOKIG00005018003) ENSOKIG00005018008 CNEP1R1 (ENSOKIG00005018027) heatr3 (ENSOKIG00005018102) tent4b (ENSOKIG00005018153) adcy7 (ENSOKIG00005018240) brd7 (ENSOKIG00005018363) nkd1 (ENSOKIG00005018410) ENSOKIG00005018428 ENSOKIG00005018440 Northern pike MODERN SPECIES 1 ENSELUG00000007681 cyp1a (ENSELUG00000007632) edc3 (ENSELUG00000007607) CSK (ENSELUG00000007566) cplx3a (ENSELUG00000007512) ENSELUG00000007502 ulk3 (ENSELUG00000007483) ENSELUG00000007414 larp6a (ENSELUG00000007341) ENSELUG00000007312 THSD4 (ENSELUG00000007238) pepd (ENSELUG00000007192) #19 CHST8 (ENSELUG00000007147) #20 KCTD15 (ENSELUG00000029944) ENSELUG00000000251 lsm14ab (ENSELUG00000007050) #22 ss18l2 (ENSELUG00000007027) GARRE1 (ENSELUG00000000230) #23 gpib (ENSELUG00000006857) #25 wtip (ENSELUG00000006795) #28 sdr42e1 (ENSELUG00000006770) zgc:101040 (ENSELUG00000006762) cnep1r1 (ENSELUG00000006740) heatr3 (ENSELUG00000006685) tent4b (ENSELUG00000006619) adcy7 (ENSELUG00000006551) brd7 (ENSELUG00000006474) nkd1 (ENSELUG00000006406) ENSELUG00000006328 nod2 (ENSELUG00000006299) CYLD (ENSELUG00000006267) Acanthomorphata ANCESTRAL SPECIES 64 ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000160407 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a ENSGT00940000158043 Euacanthomorphacea ANCESTRAL SPECIES 29 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Pinecone sodierfish MODERN SPECIES 17 ENSMMDG00005014945 cyp1a (ENSMMDG00005014947) CSK (ENSMMDG00005014956) cplx3a (ENSMMDG00005015444) ENSMMDG00005015447 ulk3 (ENSMMDG00005015450) ENSMMDG00005015544 tm2d3 (ENSMMDG00005020489) larp6a (ENSMMDG00005020492) ENSMMDG00005020499 THSD4 (ENSMMDG00005020507) pepd (ENSMMDG00005020521) #19 CHST8 (ENSMMDG00005020524) #20 KCTD15 (ENSMMDG00005020525) ENSMMDG00005020527 lsm14ab (ENSMMDG00005020532) #22 ss18l2 (ENSMMDG00005020537) GARRE1 (ENSMMDG00005020552) #23 gpib (ENSMMDG00005020599) #25 wtip (ENSMMDG00005020754) #28 sdr42e1 (ENSMMDG00005020759) zgc:101040 (ENSMMDG00005020761) cnep1r1 (ENSMMDG00005020763) heatr3 (ENSMMDG00005020773) tent4b (ENSMMDG00005020799) adcy7 (ENSMMDG00005021034) brd7 (ENSMMDG00005021060) nkd1 (ENSMMDG00005021062) nod2 (ENSMMDG00005021064) CYLD (ENSMMDG00005021080) sall1a (ENSMMDG00005021112) Percomorphaceae ANCESTRAL SPECIES 27 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Tiger tail seahorse MODERN SPECIES 132 ENSHCOG00000001306 cyp1a (ENSHCOG00000001298) CSK (ENSHCOG00000001291) cplx3a (ENSHCOG00000001280) ENSHCOG00000001275 ENSHCOG00000001270 ENSHCOG00000001263 tm2d3 (ENSHCOG00000001248) larp6a (ENSHCOG00000001241) ENSHCOG00000001206 THSD4 (ENSHCOG00000001134) pepd (ENSHCOG00000001121) #19 CHST8 (ENSHCOG00000001106) #20 KCTD15 (ENSHCOG00000001101) ENSHCOG00000001097 ENSHCOG00000001089 #22 ss18l2 (ENSHCOG00000001083) GARRE1 (ENSHCOG00000001080) #23 gpib (ENSHCOG00000001069) #25 wtip (ENSHCOG00000001056) #28 sdr42e1 (ENSHCOG00000001052) zgc:101040 (ENSHCOG00000000046) cnep1r1 (ENSHCOG00000001041) heatr3 (ENSHCOG00000001036) tent4b (ENSHCOG00000001028) adcy7 (ENSHCOG00000001020) brd7 (ENSHCOG00000001006) nkd1 (ENSHCOG00000001000) nod2 (ENSHCOG00000000996) CYLD (ENSHCOG00000000981) sall1a (ENSHCOG00000000974) Percomorphaceae_B ANCESTRAL SPECIES 12 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Ovalentaria ANCESTRAL SPECIES 17 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.a ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Atherinomorphae ANCESTRAL SPECIES 8 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.a ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Oryzias ANCESTRAL SPECIES 13 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.a.c ENSGT00390000012054.b.a.a.d ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a Oryzias_b ANCESTRAL SPECIES 5 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.a.c ENSGT00390000012054.b.a.a.d ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a Indian medaka MODERN SPECIES 26 cyp1a (ENSOMEG00000017398) edc3 (ENSOMEG00000017354) CSK (ENSOMEG00000017322) cplx3a (ENSOMEG00000017251) ENSOMEG00000017241 ulk3 (ENSOMEG00000017215) ENSOMEG00000017135 tm2d3 (ENSOMEG00000017062) larp6a (ENSOMEG00000017049) ENSOMEG00000017043 THSD4 (ENSOMEG00000017012) pepd (ENSOMEG00000016936) #19 CHST8 (ENSOMEG00000016858) #20 KCTD15 (ENSOMEG00000016824) ENSOMEG00000016761 ENSOMEG00000016637 #22 ss18l2 (ENSOMEG00000016624) GARRE1 (ENSOMEG00000016605) #23 gpib (ENSOMEG00000016553) #25 wtip (ENSOMEG00000016486) #28 sdr42e1 (ENSOMEG00000016443) ENSOMEG00000016429 ENSOMEG00000016417 cnep1r1 (ENSOMEG00000016405) heatr3 (ENSOMEG00000016387) tent4b (ENSOMEG00000016359) adcy7 (ENSOMEG00000016330) brd7 (ENSOMEG00000016248) nkd1 (ENSOMEG00000016211) nod2 (ENSOMEG00000016186) CYLD (ENSOMEG00000016155) Javanese ricefish MODERN SPECIES 17 cyp1a (ENSOJAG00000007775) edc3 (ENSOJAG00000007768) CSK (ENSOJAG00000006549) cplx3a (ENSOJAG00000006409) ENSOJAG00000006388 ulk3 (ENSOJAG00000006288) ENSOJAG00000005474 tm2d3 (ENSOJAG00000005381) larp6a (ENSOJAG00000005373) ENSOJAG00000005354 THSD4 (ENSOJAG00000005088) pepd (ENSOJAG00000005003) #19 CHST8 (ENSOJAG00000004993) #20 KCTD15 (ENSOJAG00000004965) ENSOJAG00000004926 ENSOJAG00000004914 #22 ss18l2 (ENSOJAG00000004906) GARRE1 (ENSOJAG00000004308) #23 wtip (ENSOJAG00000003763) #28 sdr42e1 (ENSOJAG00000003751) ENSOJAG00000003738 ENSOJAG00000003718 cnep1r1 (ENSOJAG00000003644) ENSOJAG00000003611 heatr3 (ENSOJAG00000003531) tent4b (ENSOJAG00000003379) adcy7 (ENSOJAG00000003248) brd7 (ENSOJAG00000003227) nkd1 (ENSOJAG00000003191) nod2 (ENSOJAG00000003016) CYLD (ENSOJAG00000002732) Oryzias_a ANCESTRAL SPECIES 6 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.a.c ENSGT00390000012054.b.a.a.d ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a Japanese Medaka HdrR DUPLICATION Japanese Medaka HdrR MODERN SPECIES 17 CSK (ENSORLG00000014381) cplx3a (ENSORLG00000027457) ENSORLG00000014341 ulk3 (ENSORLG00000014330) ENSORLG00000014313 tm2d3 (ENSORLG00000014262) larp6a (ENSORLG00000014256) ENSORLG00000026644 ENSORLG00000025062 THSD4 (ENSORLG00000014245) pepd (ENSORLG00000014210) #19 ENSORLG00000022592 CHST8 (ENSORLG00000027390) #20 KCTD15 (ENSORLG00000025895) ENSORLG00000028980 #22 lsm14ab (ENSORLG00000014145) #22 ss18l2 (ENSORLG00000014115) GARRE1 (ENSORLG00000014107) #23 gpib (ENSORLG00000014082) #25 wtip (ENSORLG00000029757) #28 sdr42e1 (ENSORLG00000014049) ENSORLG00000014039 ENSORLG00000014034 cnep1r1 (ENSORLG00000014031) heatr3 (ENSORLG00000014021) tent4b (ENSORLG00000013989) adcy7 (ENSORLG00000013973) brd7 (ENSORLG00000013923) nkd1 (ENSORLG00000013899) ENSORLG00000028294 nod2 (ENSORLG00000013891) Japanese Medaka HdrR MODERN SPECIES 17 ENSORLG00000014399 CSK (ENSORLG00000014381) cplx3a (ENSORLG00000027457) ENSORLG00000014341 ulk3 (ENSORLG00000014330) ENSORLG00000014313 tm2d3 (ENSORLG00000014262) larp6a (ENSORLG00000014256) ENSORLG00000026644 ENSORLG00000025062 THSD4 (ENSORLG00000014245) pepd (ENSORLG00000014210) #19 ENSORLG00000022592 CHST8 (ENSORLG00000027390) #20 KCTD15 (ENSORLG00000025895) ENSORLG00000028980 #22 lsm14ab (ENSORLG00000014145) #22 ss18l2 (ENSORLG00000014115) GARRE1 (ENSORLG00000014107) #23 gpib (ENSORLG00000014082) #25 wtip (ENSORLG00000029757) #28 sdr42e1 (ENSORLG00000014049) ENSORLG00000014039 ENSORLG00000014034 cnep1r1 (ENSORLG00000014031) heatr3 (ENSORLG00000014021) tent4b (ENSORLG00000013989) adcy7 (ENSORLG00000013973) brd7 (ENSORLG00000013923) nkd1 (ENSORLG00000013899) ENSORLG00000028294 Chinese medaka MODERN SPECIES 901 cyp1a (ENSOSIG00000022847) edc3 (ENSOSIG00000022912) CSK (ENSOSIG00000022873) cplx3a (ENSOSIG00000022913) ENSOSIG00000022914 ulk3 (ENSOSIG00000022922) ENSOSIG00000022976 tm2d3 (ENSOSIG00000023074) larp6a (ENSOSIG00000023078) ENSOSIG00000023087 THSD4 (ENSOSIG00000023104) pepd (ENSOSIG00000023131) #19 CHST8 (ENSOSIG00000023138) #20 KCTD15 (ENSOSIG00000023140) ENSOSIG00000023144 lsm14ab (ENSOSIG00000023149) #22 ss18l2 (ENSOSIG00000023154) GARRE1 (ENSOSIG00000023157) #23 gpib (ENSOSIG00000023167) #25 wtip (ENSOSIG00000023182) #28 sdr42e1 (ENSOSIG00000023184) zgc:101040 (ENSOSIG00000023189) heatr3 (ENSOSIG00000023207) tent4b (ENSOSIG00000023212) adcy7 (ENSOSIG00000023229) brd7 (ENSOSIG00000023242) nkd1 (ENSOSIG00000023245) nod2 (ENSOSIG00000023253) CYLD (ENSOSIG00000023298) sall1a (ENSOSIG00000023302) TOX3 (ENSOSIG00000023315) Cyprinodontiformes ANCESTRAL SPECIES 9 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.a ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Cyprinodontoidei ANCESTRAL SPECIES 6 ENSGT00390000014907.A ENSGT00950000183037.A.a ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.a.a ENSGT00390000012054.b.a.a.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a Poeciliinae ANCESTRAL SPECIES 13 ENSGT00390000014907.A ENSGT00950000183037.A.a ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.a.a ENSGT00390000012054.b.a.a.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a Poecilia ANCESTRAL SPECIES 4 ENSGT00390000014907.A ENSGT00950000183037.A.a ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.a.a ENSGT00390000012054.b.a.a.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a NAME_6 ANCESTRAL SPECIES 39 ENSGT00390000014907.A ENSGT00950000183037.A.a ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.a.a ENSGT00390000012054.b.a.a.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a Amazon molly MODERN SPECIES 298 CSK (ENSPFOG00000013644) cplx3a (ENSPFOG00000013787) ENSPFOG00000020930 ulk3 (ENSPFOG00000013802) ENSPFOG00000013908 tm2d3 (ENSPFOG00000014152) larp6a (ENSPFOG00000014175) LRRC49 (ENSPFOG00000014185) THSD4 (ENSPFOG00000014254) pepd (ENSPFOG00000014399) #19 CHST8 (ENSPFOG00000014586) #20 KCTD15 (ENSPFOG00000014608) ENSPFOG00000014662 lsm14ab (ENSPFOG00000014724) #22 ss18l2 (ENSPFOG00000014827) GARRE1 (ENSPFOG00000014839) #23 gpib (ENSPFOG00000014929) #25 wtip (ENSPFOG00000015084) #28 sdr42e1 (ENSPFOG00000015119) zgc:101040 (ENSPFOG00000015128) cnep1r1 (ENSPFOG00000015133) heatr3 (ENSPFOG00000015145) tent4b (ENSPFOG00000015267) adcy7 (ENSPFOG00000015338) brd7 (ENSPFOG00000015523) nkd1 (ENSPFOG00000015633) nod2 (ENSPFOG00000015686) CYLD (ENSPFOG00000015716) sall1a (ENSPFOG00000015799) Sailfin molly MODERN SPECIES 918 ENSPLAG00000012039 lsm14ab (ENSPLAG00000012025) #22 ss18l2 (ENSPLAG00000012015) GARRE1 (ENSPLAG00000011987) #23 gpib (ENSPLAG00000011930) #25 wtip (ENSPLAG00000011886) #28 sdr42e1 (ENSPLAG00000011879) ENSPLAG00000011868 ENSPLAG00000011854 cnep1r1 (ENSPLAG00000011841) heatr3 (ENSPLAG00000011828) tent4b (ENSPLAG00000011816) adcy7 (ENSPLAG00000011809) Guppy MODERN SPECIES 455 ENSPREG00000008308 cyp1a (ENSPREG00000008287) CSK (ENSPREG00000008273) cplx3a (ENSPREG00000008261) ENSPREG00000008248 ulk3 (ENSPREG00000008190) ENSPREG00000008101 tm2d3 (ENSPREG00000008079) larp6a (ENSPREG00000008067) ENSPREG00000008047 THSD4 (ENSPREG00000008033) pepd (ENSPREG00000007826) #19 CHST8 (ENSPREG00000007780) #20 KCTD15 (ENSPREG00000007748) ENSPREG00000007729 lsm14ab (ENSPREG00000007683) #22 ss18l2 (ENSPREG00000007658) GARRE1 (ENSPREG00000007617) #23 gpib (ENSPREG00000007409) #25 wtip (ENSPREG00000007344) #28 sdr42e1 (ENSPREG00000007333) ENSPREG00000007329 ENSPREG00000007315 cnep1r1 (ENSPREG00000007293) heatr3 (ENSPREG00000007268) tent4b (ENSPREG00000007243) adcy7 (ENSPREG00000007085) brd7 (ENSPREG00000007032) nkd1 (ENSPREG00000006999) nod2 (ENSPREG00000006956) CYLD (ENSPREG00000006842) Platyfish MODERN SPECIES 18 ENSXMAG00000016783 cyp1a (ENSXMAG00000016761) CSK (ENSXMAG00000016732) cplx3a (ENSXMAG00000026598) ENSXMAG00000016729 ulk3 (ENSXMAG00000016706) ENSXMAG00000016645 tm2d3 (ENSXMAG00000022710) larp6a (ENSXMAG00000021015) ENSXMAG00000016602 THSD4 (ENSXMAG00000016588) pepd (ENSXMAG00000016552) #19 CHST8 (ENSXMAG00000016550) #20 KCTD15 (ENSXMAG00000016539) ENSXMAG00000016531 lsm14ab (ENSXMAG00000016519) #22 ss18l2 (ENSXMAG00000027005) GARRE1 (ENSXMAG00000016500) #23 gpib (ENSXMAG00000016488) #25 wtip (ENSXMAG00000016487) #28 sdr42e1 (ENSXMAG00000024494) ENSXMAG00000023908 ENSXMAG00000029165 cnep1r1 (ENSXMAG00000016481) heatr3 (ENSXMAG00000016449) tent4b (ENSXMAG00000023205) adcy7 (ENSXMAG00000016360) brd7 (ENSXMAG00000016346) nkd1 (ENSXMAG00000016338) nod2 (ENSXMAG00000016318) CYLD (ENSXMAG00000016279) NAME_4 ANCESTRAL SPECIES 161 ENSGT00390000014907.A ENSGT00950000183037.A.a ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.a.a ENSGT00390000012054.b.a.a.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a Sheepshead minnow MODERN SPECIES 332 lsm14ab (ENSCVAG00000020962) #22 ss18l2 (ENSCVAG00000020948) GARRE1 (ENSCVAG00000020935) #23 gpib (ENSCVAG00000020892) #25 wtip (ENSCVAG00000020802) #28 sdr42e1 (ENSCVAG00000020779) zgc:101040 (ENSCVAG00000020769) cnep1r1 (ENSCVAG00000020764) heatr3 (ENSCVAG00000020742) tent4b (ENSCVAG00000020733) adcy7 (ENSCVAG00000020723) brd7 (ENSCVAG00000020684) nkd1 (ENSCVAG00000020673) nod2 (ENSCVAG00000020668) ENSCVAG00000020632 CYLD (ENSCVAG00000020619) Mummichog MODERN SPECIES 692 ENSFHEG00000021933 lsm14ab (ENSFHEG00000021882) #22 ss18l2 (ENSFHEG00000021768) GARRE1 (ENSFHEG00000021866) #23 gpib (ENSFHEG00000021750) #25 wtip (ENSFHEG00000021550) #28 sdr42e1 (ENSFHEG00000021521) ENSFHEG00000021508 ENSFHEG00000021502 ctsba (ENSFHEG00000021482) pdcd5 (ENSFHEG00000021427) mvda (ENSFHEG00000021391) cyba (ENSFHEG00000021377) tcf25 (ENSFHEG00000021356) mc1r (ENSFHEG00000021344) def8 (ENSFHEG00000021316) ENSFHEG00000000525 Aplocheiloidei ANCESTRAL SPECIES 40 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a ENSGT00940000158043 ENSGT00940000155706 Mangrove rivulus MODERN SPECIES 114 edc3 (ENSKMAG00000001987) CSK (ENSKMAG00000001906) cplx3a (ENSKMAG00000001870) ENSKMAG00000001857 ulk3 (ENSKMAG00000001839) ENSKMAG00000001740 tm2d3 (ENSKMAG00000001726) larp6a (ENSKMAG00000001702) ENSKMAG00000001681 THSD4 (ENSKMAG00000001612) DDX10 (ENSKMAG00000001578) pepd (ENSKMAG00000001504) #19 CHST8 (ENSKMAG00000001490) #20 KCTD15 (ENSKMAG00000001472) ENSKMAG00000001447 lsm14ab (ENSKMAG00000001398) #22 ss18l2 (ENSKMAG00000001359) GARRE1 (ENSKMAG00000001298) #23 gpib (ENSKMAG00000001204) #25 wtip (ENSKMAG00000001146) #28 sdr42e1 (ENSKMAG00000001125) zgc:101040 (ENSKMAG00000001117) cnep1r1 (ENSKMAG00000001094) heatr3 (ENSKMAG00000001086) tent4b (ENSKMAG00000001070) adcy7 (ENSKMAG00000001033) brd7 (ENSKMAG00000001007) nkd1 (ENSKMAG00000000993) nod2 (ENSKMAG00000000946) CYLD (ENSKMAG00000000844) Turquoise killifish MODERN SPECIES 1616 ENSNFUG00015022980 CSK (ENSNFUG00015022989) CPLX3 (ENSNFUG00015023016) ENSNFUG00015023019 ulk3 (ENSNFUG00015023023) TARSL2 (ENSNFUG00015023046) TM2D3 (ENSNFUG00015023191) larp6a (ENSNFUG00015023196) ENSNFUG00015023203 ADAMTSL7 (ENSNFUG00015023225) PEPD (ENSNFUG00015023263) #19 ENSNFUG00015023277 #20 kctd15a (ENSNFUG00015023278) ENSNFUG00015023286 ENSNFUG00015023298 lsm14ab (ENSNFUG00015023333) #22 ss18l2 (ENSNFUG00015004246) KIAA0355 (ENSNFUG00015004264) #23 GPI (ENSNFUG00015004311) #25 WTIP (ENSNFUG00015004367) #28 SDR42E1 (ENSNFUG00015004380) HEATR3 (ENSNFUG00015004394) tent4b (ENSNFUG00015004422) UBL7 (ENSNFUG00015004456) cd276 (ENSNFUG00015004464) C18H15ORF59 (ENSNFUG00015004469) ENSNFUG00015004474 LOXL1 (ENSNFUG00015004478) SCAMP5 (ENSNFUG00015004482) IGDCC4 (ENSNFUG00015004491) Ovalentaria_B ANCESTRAL SPECIES 10 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.b ENSGT00390000012054.b.b ENSGT00390000012054.b.a.a ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 Pomacentridae ANCESTRAL SPECIES 76 ENSGT00940000153657.B.g #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Pomacentridae_A ANCESTRAL SPECIES 71 ENSGT00940000153657.B.g #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.b.b ENSGT00390000012054.b.b.a ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a Amphiprion ANCESTRAL SPECIES 89 ENSGT00940000153657.B.g #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.b.b ENSGT00390000012054.b.b.a ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00940000180560 ENSGT00440000033589.c ENSGT00940000160934 Orange clownfish MODERN SPECIES SPPL2A (ENSAPEG00000000833) trpm7 (ENSAPEG00000000737) bcl2l10 (ENSAPEG00000000719) gnb5b (ENSAPEG00000000676) MYO5A (ENSAPEG00000000564) arpp19b (ENSAPEG00000000557) atosa (ENSAPEG00000000549) onecut1 (ENSAPEG00000000531) UNC13C (ENSAPEG00000000402) pepd (ENSAPEG00000000291) #19 ENSAPEG00000011041 ENSAPEG00000011035 CHST8 (ENSAPEG00000011029) #20 KCTD15 (ENSAPEG00000010989) ENSAPEG00000010971 lsm14ab (ENSAPEG00000010936) #22 ss18l2 (ENSAPEG00000010908) GARRE1 (ENSAPEG00000010830) #23 gpib (ENSAPEG00000010747) #25 wtip (ENSAPEG00000010702) #28 sdr42e1 (ENSAPEG00000010696) ENSAPEG00000010663 ENSAPEG00000010642 cnep1r1 (ENSAPEG00000010621) heatr3 (ENSAPEG00000010532) tent4b (ENSAPEG00000010518) adcy7 (ENSAPEG00000010481) brd7 (ENSAPEG00000010466) ENSAPEG00000010452 nkd1 (ENSAPEG00000010329) nod2 (ENSAPEG00000010272) Clown anemonefish MODERN SPECIES 1291 vps54 (ENSAOCG00000017438) ENSAOCG00000017485 slc29a2 (ENSAOCG00000017530) lgalsla (ENSAOCG00000017580) MAL (ENSAOCG00000002272) pgap4 (ENSAOCG00000002061) ENSAOCG00000017621 ENSAOCG00000017643 ENSAOCG00000017754 ENSAOCG00000001244 CHST8 (ENSAOCG00000017778) #20 KCTD15 (ENSAOCG00000017787) ENSAOCG00000017833 lsm14ab (ENSAOCG00000001256) #22 ss18l2 (ENSAOCG00000017890) GARRE1 (ENSAOCG00000017946) #23 gpib (ENSAOCG00000001273) #25 ENSAOCG00000018020 #28 sdr42e1 (ENSAOCG00000018041) zgc:101040 (ENSAOCG00000018073) cnep1r1 (ENSAOCG00000018091) heatr3 (ENSAOCG00000001286) tent4b (ENSAOCG00000018117) adcy7 (ENSAOCG00000018155) brd7 (ENSAOCG00000018201) ENSAOCG00000018218 nkd1 (ENSAOCG00000018231) nod2 (ENSAOCG00000018264) CYLD (ENSAOCG00000018344) Spiny chromis MODERN SPECIES 1 ENSAPOG00000021704 ENSAPOG00000021756 tm2d3 (ENSAPOG00000021763) larp6a (ENSAPOG00000021773) LRRC49 (ENSAPOG00000021808) THSD4 (ENSAPOG00000021831) pepd (ENSAPOG00000021905) #19 CHST8 (ENSAPOG00000000625) #20 KCTD15 (ENSAPOG00000021937) ENSAPOG00000021979 lsm14ab (ENSAPOG00000021998) #22 ss18l2 (ENSAPOG00000022048) GARRE1 (ENSAPOG00000022098) #23 gpib (ENSAPOG00000022181) #25 wtip (ENSAPOG00000022259) #28 sdr42e1 (ENSAPOG00000022272) zgc:101040 (ENSAPOG00000022296) cnep1r1 (ENSAPOG00000022325) heatr3 (ENSAPOG00000022363) tent4b (ENSAPOG00000022376) adcy7 (ENSAPOG00000022420) brd7 (ENSAPOG00000022561) nkd1 (ENSAPOG00000022590) nod2 (ENSAPOG00000001020) CYLD (ENSAPOG00000022732) sall1a (ENSAPOG00000022764) Bicolor damselfish MODERN SPECIES 1445 KCTD15 (ENSSPAG00000003071) ENSSPAG00000003104 lsm14ab (ENSSPAG00000003128) #22 ss18l2 (ENSSPAG00000003145) GARRE1 (ENSSPAG00000003160) #23 gpib (ENSSPAG00000003231) #25 Cichlidae ANCESTRAL SPECIES 11 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.b ENSGT00390000012054.b.a.a ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a Midas cichlid MODERN SPECIES 109 CSK (ENSACIG00000005315) cplx3a (ENSACIG00000005284) ENSACIG00000005276 ulk3 (ENSACIG00000005245) ENSACIG00000005189 tm2d3 (ENSACIG00000005175) larp6a (ENSACIG00000005166) LRRC49 (ENSACIG00000005140) THSD4 (ENSACIG00000005092) pepd (ENSACIG00000005010) #19 pepd (ENSACIG00000004984) #19 ca8 (ENSACIG00000004967) CHST8 (ENSACIG00000004955) #20 KCTD15 (ENSACIG00000004941) ENSACIG00000004913 lsm14ab (ENSACIG00000004874) #22 ss18l2 (ENSACIG00000004799) GARRE1 (ENSACIG00000004748) #23 gpib (ENSACIG00000004705) #25 ENSACIG00000004698 wtip (ENSACIG00000004662) #28 sdr42e1 (ENSACIG00000004653) zgc:101040 (ENSACIG00000004648) cnep1r1 (ENSACIG00000004627) heatr3 (ENSACIG00000004545) tent4b (ENSACIG00000004518) adcy7 (ENSACIG00000004361) brd7 (ENSACIG00000004326) nkd1 (ENSACIG00000004309) nod2 (ENSACIG00000004283) CYLD (ENSACIG00000004251) Pseudocrenilabrinae ANCESTRAL SPECIES 13 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.b ENSGT00390000012054.b.a.a.e ENSGT00390000012054.b.a.a.f ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 Nile tilapia MODERN SPECIES tm2d3 (ENSONIG00000033542) larp6a (ENSONIG00000033021) ENSONIG00000002895 THSD4 (ENSONIG00000002894) pepd (ENSONIG00000002891) #19 ENSONIG00000030417 ENSONIG00000015505 ENSONIG00000028379 ENSONIG00000039383 ENSONIG00000036005 ENSONIG00000030451 ENSONIG00000035293 CHST8 (ENSONIG00000020604) #20 KCTD15 (ENSONIG00000002890) ENSONIG00000002889 ENSONIG00000033373 #22 ss18l2 (ENSONIG00000027346) GARRE1 (ENSONIG00000002881) #23 gpib (ENSONIG00000002874) #25 wtip (ENSONIG00000002870) #28 sdr42e1 (ENSONIG00000002869) ENSONIG00000002868 ENSONIG00000020603 ENSONIG00000029863 cnep1r1 (ENSONIG00000002867) heatr3 (ENSONIG00000002862) tent4b (ENSONIG00000002860) adcy7 (ENSONIG00000002854) brd7 (ENSONIG00000002844) nkd1 (ENSONIG00000029445) nod2 (ENSONIG00000002837) Pseudocrenilabrinae_A ANCESTRAL SPECIES 13 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.b ENSGT00390000012054.b.a.a.e ENSGT00390000012054.b.a.a.f ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 Lyretail cichlid MODERN SPECIES 290 cyp1a (ENSNBRG00000007864) edc3 (ENSNBRG00000007881) CSK (ENSNBRG00000007926) cplx3a (ENSNBRG00000007964) ENSNBRG00000007970 ulk3 (ENSNBRG00000007987) ENSNBRG00000008049 tm2d3 (ENSNBRG00000008088) larp6a (ENSNBRG00000008120) LRRC49 (ENSNBRG00000008139) THSD4 (ENSNBRG00000008176) pepd (ENSNBRG00000008227) #19 CHST8 (ENSNBRG00000008261) #20 KCTD15 (ENSNBRG00000008272) ENSNBRG00000008301 lsm14ab (ENSNBRG00000008333) #22 ss18l2 (ENSNBRG00000008363) GARRE1 (ENSNBRG00000008401) #23 gpib (ENSNBRG00000008511) #25 wtip (ENSNBRG00000008738) #28 sdr42e1 (ENSNBRG00000008768) ENSNBRG00000008776 ENSNBRG00000008797 ENSNBRG00000008815 cnep1r1 (ENSNBRG00000008843) heatr3 (ENSNBRG00000008875) tent4b (ENSNBRG00000008931) adcy7 (ENSNBRG00000008995) brd7 (ENSNBRG00000009096) nkd1 (ENSNBRG00000009143) ENSNBRG00000009203 Haplochromini ANCESTRAL SPECIES 11 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.b ENSGT00390000012054.b.a.a.e ENSGT00390000012054.b.a.a.f ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 Burton s mouthbrooder MODERN SPECIES 272 cyp1a (ENSHBUG00000020804) edc3 (ENSHBUG00000020817) CSK (ENSHBUG00000020879) cplx3a (ENSHBUG00000020901) ENSHBUG00000020912 ulk3 (ENSHBUG00000020921) ENSHBUG00000020986 tm2d3 (ENSHBUG00000021002) larp6a (ENSHBUG00000021014) LRRC49 (ENSHBUG00000021042) THSD4 (ENSHBUG00000021105) pepd (ENSHBUG00000021215) #19 CHST8 (ENSHBUG00000021227) #20 KCTD15 (ENSHBUG00000021266) ENSHBUG00000021306 lsm14ab (ENSHBUG00000021356) #22 ss18l2 (ENSHBUG00000021367) GARRE1 (ENSHBUG00000021415) #23 gpib (ENSHBUG00000021470) #25 wtip (ENSHBUG00000000663) #28 sdr42e1 (ENSHBUG00000021502) ENSHBUG00000021546 ENSHBUG00000021556 cnep1r1 (ENSHBUG00000021590) heatr3 (ENSHBUG00000021602) tent4b (ENSHBUG00000021610) adcy7 (ENSHBUG00000021651) brd7 (ENSHBUG00000021765) nkd1 (ENSHBUG00000021793) nod2 (ENSHBUG00000021836) CYLD (ENSHBUG00000021986) Haplochromini_A ANCESTRAL SPECIES 10 ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000179779 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.b ENSGT00390000012054.b.a.a.e ENSGT00390000012054.b.a.a.f ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 P. nyererei MODERN SPECIES 320 edc3 (ENSPNYG00000009669) CSK (ENSPNYG00000009686) cplx3a (ENSPNYG00000009724) ENSPNYG00000009730 ulk3 (ENSPNYG00000009745) ENSPNYG00000009768 tm2d3 (ENSPNYG00000009810) larp6a (ENSPNYG00000009835) LRRC49 (ENSPNYG00000009857) THSD4 (ENSPNYG00000009897) ENSPNYG00000009948 pepd (ENSPNYG00000010092) #19 CHST8 (ENSPNYG00000010148) #20 KCTD15 (ENSPNYG00000010156) ENSPNYG00000010181 lsm14ab (ENSPNYG00000010236) #22 ss18l2 (ENSPNYG00000010263) GARRE1 (ENSPNYG00000010277) #23 gpib (ENSPNYG00000010315) #25 wtip (ENSPNYG00000010369) #28 sdr42e1 (ENSPNYG00000010400) ENSPNYG00000010408 ENSPNYG00000010428 ENSPNYG00000010450 cnep1r1 (ENSPNYG00000010462) heatr3 (ENSPNYG00000010490) tent4b (ENSPNYG00000010512) adcy7 (ENSPNYG00000010540) brd7 (ENSPNYG00000010644) nkd1 (ENSPNYG00000010683) nod2 (ENSPNYG00000010746) Haplochromini_B ANCESTRAL SPECIES 3 ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000179779 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.a.b ENSGT00390000012054.b.a.a.e ENSGT00390000012054.b.a.a.f ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 Zebra mbuna MODERN SPECIES 1091 edc3 (ENSMZEG00005005654) CSK (ENSMZEG00005005671) cplx3a (ENSMZEG00005005699) ENSMZEG00005005704 ulk3 (ENSMZEG00005005710) ENSMZEG00005005731 tm2d3 (ENSMZEG00005005769) larp6a (ENSMZEG00005005774) ENSMZEG00005005786 THSD4 (ENSMZEG00005005793) ENSMZEG00005005829 pepd (ENSMZEG00005005846) #19 CHST8 (ENSMZEG00005005878) #20 KCTD15 (ENSMZEG00005005881) ENSMZEG00005005903 ENSMZEG00005005945 #22 ss18l2 (ENSMZEG00005005958) GARRE1 (ENSMZEG00005005988) #23 gpib (ENSMZEG00005006021) #25 wtip (ENSMZEG00005006076) #28 sdr42e1 (ENSMZEG00005006103) ENSMZEG00005006105 ENSMZEG00005006123 ENSMZEG00005006135 cnep1r1 (ENSMZEG00005006145) heatr3 (ENSMZEG00005006165) tent4b (ENSMZEG00005006186) adcy7 (ENSMZEG00005006215) brd7 (ENSMZEG00005006263) nkd1 (ENSMZEG00005006305) nod2 (ENSMZEG00005006319) Eastern happy MODERN SPECIES CSK (ENSACLG00000018710) cplx3a (ENSACLG00000018695) ENSACLG00000018685 ulk3 (ENSACLG00000018653) ENSACLG00000018601 tm2d3 (ENSACLG00000018580) larp6a (ENSACLG00000018561) LRRC49 (ENSACLG00000018521) THSD4 (ENSACLG00000018475) ENSACLG00000018387 pepd (ENSACLG00000018316) #19 ENSACLG00000018309 CHST8 (ENSACLG00000018303) #20 KCTD15 (ENSACLG00000018268) ENSACLG00000018235 ENSACLG00000018221 #22 ss18l2 (ENSACLG00000018129) GARRE1 (ENSACLG00000018026) #23 gpib (ENSACLG00000017912) #25 wtip (ENSACLG00000017833) #28 sdr42e1 (ENSACLG00000017826) ENSACLG00000017815 ENSACLG00000017788 ENSACLG00000017784 cnep1r1 (ENSACLG00000017758) heatr3 (ENSACLG00000017658) tent4b (ENSACLG00000017633) adcy7 (ENSACLG00000017568) brd7 (ENSACLG00000017509) nkd1 (ENSACLG00000017488) nod2 (ENSACLG00000017409) Percomorphaceae_C ANCESTRAL SPECIES 11 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Percomorphaceae_D ANCESTRAL SPECIES 11 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Anabantaria ANCESTRAL SPECIES 11 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Anabantoidei ANCESTRAL SPECIES 8 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Climbing perch MODERN SPECIES 16 ENSATEG00000028710 ENSATEG00000029741 ENSATEG00000004116 ULK3 (ENSATEG00000004106) ENSATEG00000004034 ENSATEG00000004025 larp6a (ENSATEG00000004018) ENSATEG00000026618 ENSATEG00000003958 THSD4 (ENSATEG00000003949) PEPD (ENSATEG00000003776) #19 PEPD (ENSATEG00000003710) #19 CHST8 (ENSATEG00000026470) #20 KCTD15 (ENSATEG00000003653) ENSATEG00000003635 lsm14ab (ENSATEG00000003629) #22 ss18l2 (ENSATEG00000003608) ENSATEG00000003534 #23 gpib (ENSATEG00000003452) #25 wtip (ENSATEG00000003414) #28 sdr42e1 (ENSATEG00000003407) ENSATEG00000026266 ENSATEG00000029184 ENSATEG00000027001 CNEP1R1 (ENSATEG00000027563) heatr3 (ENSATEG00000026766) tent4b (ENSATEG00000003179) adcy7 (ENSATEG00000003161) brd7 (ENSATEG00000003146) nkd1 (ENSATEG00000003139) nod2 (ENSATEG00000003122) Siamese fighting fish MODERN SPECIES 14 cyp1a (ENSBSLG00000017529) edc3 (ENSBSLG00000017511) CSK (ENSBSLG00000016793) cplx3a (ENSBSLG00000016612) ENSBSLG00000016570 ulk3 (ENSBSLG00000015924) ENSBSLG00000015529 tm2d3 (ENSBSLG00000015509) larp6a (ENSBSLG00000015499) ENSBSLG00000015417 THSD4 (ENSBSLG00000015204) pepd (ENSBSLG00000014423) #19 CHST8 (ENSBSLG00000014384) #20 KCTD15 (ENSBSLG00000014356) ENSBSLG00000014279 lsm14ab (ENSBSLG00000014255) #22 ss18l2 (ENSBSLG00000014237) GARRE1 (ENSBSLG00000014094) #23 gpib (ENSBSLG00000011985) #25 wtip (ENSBSLG00000011701) #28 sdr42e1 (ENSBSLG00000011637) ENSBSLG00000011302 ENSBSLG00000011299 ENSBSLG00000011295 heatr3 (ENSBSLG00000011243) tent4b (ENSBSLG00000011102) adcy7 (ENSBSLG00000010726) brd7 (ENSBSLG00000010239) nkd1 (ENSBSLG00000010211) nod2 (ENSBSLG00000010171) CYLD (ENSBSLG00000009895) Zig-zag eel MODERN SPECIES 17 ENSMAMG00000005423 CSK (ENSMAMG00000005371) ENSMAMG00000028446 ENSMAMG00000005350 ULK3 (ENSMAMG00000005332) ENSMAMG00000005294 ENSMAMG00000005273 larp6a (ENSMAMG00000005261) ENSMAMG00000005238 THSD4 (ENSMAMG00000005130) ENSMAMG00000005118 PEPD (ENSMAMG00000005061) #19 CHST8 (ENSMAMG00000005035) #20 KCTD15 (ENSMAMG00000005021) ENSMAMG00000004995 lsm14ab (ENSMAMG00000004948) #22 ss18l2 (ENSMAMG00000004928) ENSMAMG00000004885 #23 gpib (ENSMAMG00000004828) #25 wtip (ENSMAMG00000004782) #28 sdr42e1 (ENSMAMG00000028360) ENSMAMG00000004754 CNEP1R1 (ENSMAMG00000025311) heatr3 (ENSMAMG00000004653) tent4b (ENSMAMG00000004618) adcy7 (ENSMAMG00000004499) brd7 (ENSMAMG00000004453) nkd1 (ENSMAMG00000004411) nod2 (ENSMAMG00000004330) CYLD (ENSMAMG00000004219) sall1a (ENSMAMG00000004164) Carangaria ANCESTRAL SPECIES 11 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Carangaria_A ANCESTRAL SPECIES 20 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Seriola ANCESTRAL SPECIES 13 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.i ENSGT00390000012054.b.j ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a Greater amberjack MODERN SPECIES 1 CSK (ENSSDUG00000007607) CPLX3 (ENSSDUG00000007578) ENSSDUG00000007572 ENSSDUG00000007561 ulk3 (ENSSDUG00000007533) ENSSDUG00000007476 tm2d3 (ENSSDUG00000007455) larp6a (ENSSDUG00000007438) ENSSDUG00000007364 THSD4 (ENSSDUG00000007334) pepd (ENSSDUG00000007313) #19 ENSSDUG00000007308 CHST8 (ENSSDUG00000007299) #20 KCTD15 (ENSSDUG00000007285) ENSSDUG00000007248 lsm14ab (ENSSDUG00000007229) #22 ss18l2 (ENSSDUG00000007158) GARRE1 (ENSSDUG00000007105) #23 gpib (ENSSDUG00000007042) #25 wtip (ENSSDUG00000006988) #28 ENSSDUG00000006958 sdr42e1 (ENSSDUG00000006949) ENSSDUG00000006928 cnep1r1 (ENSSDUG00000006917) heatr3 (ENSSDUG00000006889) tent4b (ENSSDUG00000006848) adcy7 (ENSSDUG00000006797) brd7 (ENSSDUG00000006703) nkd1 (ENSSDUG00000006672) nod2 (ENSSDUG00000006648) CYLD (ENSSDUG00000006536) Yellowtail amberjack MODERN SPECIES 3186 cyp1a (ENSSLDG00000016420) ENSSLDG00000016431 CSK (ENSSLDG00000016451) cplx3a (ENSSLDG00000016499) ENSSLDG00000016506 ulk3 (ENSSLDG00000016526) ENSSLDG00000016574 tm2d3 (ENSSLDG00000016630) larp6a (ENSSLDG00000016647) ENSSLDG00000016661 THSD4 (ENSSLDG00000016691) pepd (ENSSLDG00000016744) #19 CHST8 (ENSSLDG00000016796) #20 KCTD15 (ENSSLDG00000016806) ENSSLDG00000016833 lsm14ab (ENSSLDG00000016887) #22 GARRE1 (ENSSLDG00000016922) #23 ss18l2 (ENSSLDG00000016988) gpib (ENSSLDG00000017085) #25 wtip (ENSSLDG00000017162) #28 sdr42e1 (ENSSLDG00000017190) ENSSLDG00000017202 ENSSLDG00000017221 cnep1r1 (ENSSLDG00000017238) heatr3 (ENSSLDG00000017258) tent4b (ENSSLDG00000017282) adcy7 (ENSSLDG00000017343) brd7 (ENSSLDG00000017420) nkd1 (ENSSLDG00000017484) nod2 (ENSSLDG00000017497) CYLD (ENSSLDG00000017572) Barramundi perch MODERN SPECIES 98 ENSLCAG00010015889 #20 KCTD15 (ENSLCAG00010015893) ENSLCAG00010015899 lsm14ab (ENSLCAG00010015909) #22 ss18l2 (ENSLCAG00010015916) GARRE1 (ENSLCAG00010015925) #23 gpib (ENSLCAG00010015967) #25 wtip (ENSLCAG00010016077) #28 sdr42e1 (ENSLCAG00010016081) zgc:101040 (ENSLCAG00010016085) cnep1r1 (ENSLCAG00010016091) heatr3 (ENSLCAG00010016105) tent4b (ENSLCAG00010016119) adcy7 (ENSLCAG00010016137) brd7 (ENSLCAG00010016194) nkd1 (ENSLCAG00010016201) nod2 (ENSLCAG00010016222) CYLD (ENSLCAG00010016261) sall1a (ENSLCAG00010016267) Pleuronectoidei ANCESTRAL SPECIES 10 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a ENSGT00940000158043 Turbot MODERN SPECIES 17 ENSSMAG00000010176 CSK (ENSSMAG00000010099) ENSSMAG00000024557 ENSSMAG00000010070 ULK3 (ENSSMAG00000010042) ENSSMAG00000009984 ENSSMAG00000034282 larp6a (ENSSMAG00000009953) ENSSMAG00000009949 ENSSMAG00000009926 THSD4 (ENSSMAG00000009900) PEPD (ENSSMAG00000009882) #19 CHST8 (ENSSMAG00000026831) #20 KCTD15 (ENSSMAG00000009835) ENSSMAG00000009805 lsm14ab (ENSSMAG00000009782) #22 ss18l2 (ENSSMAG00000009760) ENSSMAG00000009697 #23 gpib (ENSSMAG00000009643) #25 wtip (ENSSMAG00000009606) #28 sdr42e1 (ENSSMAG00000035062) CNEP1R1 (ENSSMAG00000032497) heatr3 (ENSSMAG00000038075) tent4b (ENSSMAG00000009474) adcy7 (ENSSMAG00000009414) brd7 (ENSSMAG00000009397) nkd1 (ENSSMAG00000009368) nod2 (ENSSMAG00000009305) CYLD (ENSSMAG00000009173) ENSSMAG00000031343 sall1a (ENSSMAG00000009160) Tongue sole MODERN SPECIES 15 cyp1a (ENSCSEG00000011070) CSK (ENSCSEG00000011082) cplx3a (ENSCSEG00000011098) ENSCSEG00000011101 ENSCSEG00000011104 ENSCSEG00000011120 tm2d3 (ENSCSEG00000011181) larp6a (ENSCSEG00000011196) ENSCSEG00000011212 ENSCSEG00000011231 THSD4 (ENSCSEG00000011238) pepd (ENSCSEG00000011258) #19 CHST8 (ENSCSEG00000011273) #20 KCTD15 (ENSCSEG00000011283) ENSCSEG00000011298 lsm14ab (ENSCSEG00000011324) #22 ss18l2 (ENSCSEG00000011368) GARRE1 (ENSCSEG00000011336) #23 gpib (ENSCSEG00000011377) #25 wtip (ENSCSEG00000011397) #28 sdr42e1 (ENSCSEG00000011403) cnep1r1 (ENSCSEG00000011418) heatr3 (ENSCSEG00000011435) zdhhc7 (ENSCSEG00000011457) SLC7A9 (ENSCSEG00000011475) #9 RGS9BP (ENSCSEG00000011493) nudt19 (ENSCSEG00000011497) #7 SLC7A9 (ENSCSEG00000011504) #9 zfand3 (ENSCSEG00000011514) TMEM266 (ENSCSEG00000011530) ENSCSEG00000011552 Eupercaria ANCESTRAL SPECIES 14 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Eupecaria_A ANCESTRAL SPECIES 15 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.c ENSGT00390000012054.b.d.a ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a Ballan wrasse MODERN SPECIES rhpn2 (ENSLBEG00000000125) #12 cep89 (ENSLBEG00000000128) zgc:165481 (ENSLBEG00000000133) ENSLBEG00000000138 ENSLBEG00000000155 tm2d3 (ENSLBEG00000000161) larp6a (ENSLBEG00000000170) ENSLBEG00000000187 LRRC49 (ENSLBEG00000000205) THSD4 (ENSLBEG00000000230) pepd (ENSLBEG00000000291) #19 ENSLBEG00000000344 CHST8 (ENSLBEG00000000365) #20 KCTD15 (ENSLBEG00000000379) ENSLBEG00000000415 lsm14ab (ENSLBEG00000000455) #22 ss18l2 (ENSLBEG00000000544) GARRE1 (ENSLBEG00000000666) #23 gpib (ENSLBEG00000000726) #25 wtip (ENSLBEG00000000789) #28 sdr42e1 (ENSLBEG00000000843) ENSLBEG00000000864 trpm7 (ENSLBEG00000000986) kifbp (ENSLBEG00000001158) mpc1 (ENSLBEG00000001184) ENSLBEG00000001209 ENSLBEG00000001218 ddx21 (ENSLBEG00000001244) ENSLBEG00000001278 CSMD1 (ENSLBEG00000001403) MYOM2 (ENSLBEG00000001678) Eupecaria_B ANCESTRAL SPECIES 15 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.c ENSGT00390000012054.b.d.a ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a Perciformes ANCESTRAL SPECIES 15 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.c ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Cottioidei ANCESTRAL SPECIES 35 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000153942.b ENSGT00940000154748.A ENSGT00940000155463 ENSGT00730000110960.b ENSGT00940000160143 ENSGT00390000010152 ENSGT00940000159763 ENSGT00390000010067 ENSGT00940000160728.i ENSGT00940000160590 ENSGT00940000159506 ENSGT00390000000954 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000006876 Lumpfish DUPLICATION Lumpfish MODERN SPECIES 18 cyp1a (ENSCLMG00005022023) EDC3 (ENSCLMG00005000006) CSK (ENSCLMG00005000057) cplx3a (ENSCLMG00005000747) ENSCLMG00005000749 ulk3 (ENSCLMG00005000751) ENSCLMG00005000759 tm2d3 (ENSCLMG00005000762) larp6a (ENSCLMG00005000763) ENSCLMG00005000765 THSD4 (ENSCLMG00005000767) pepd (ENSCLMG00005000775) #19 CHST8 (ENSCLMG00005000840) #20 KCTD15 (ENSCLMG00005000843) ENSCLMG00005000844 ENSCLMG00005000847 #22 LSM14A (ENSCLMG00005000848) #22 HDGFL3 (ENSCLMG00005000852) rbb4l (ENSCLMG00005000862) txlng (ENSCLMG00005000905) ccdc102a (ENSCLMG00005000914) DOK4 (ENSCLMG00005000915) PCSK6 (ENSCLMG00005000916) ENSCLMG00005000922 PLEKHF1 (ENSCLMG00005000924) pop4 (ENSCLMG00005000926) tpcn2 (ENSCLMG00005000927) nadsyn1 (ENSCLMG00005000929) ZRSR2 (ENSCLMG00005000944) ap1s2 (ENSCLMG00005000950) PHKA2 (ENSCLMG00005000984) Lumpfish MODERN SPECIES 18 EDC3 (ENSCLMG00005000006) CSK (ENSCLMG00005000057) cplx3a (ENSCLMG00005000747) ENSCLMG00005000749 ulk3 (ENSCLMG00005000751) ENSCLMG00005000759 tm2d3 (ENSCLMG00005000762) larp6a (ENSCLMG00005000763) ENSCLMG00005000765 THSD4 (ENSCLMG00005000767) pepd (ENSCLMG00005000775) #19 CHST8 (ENSCLMG00005000840) #20 KCTD15 (ENSCLMG00005000843) ENSCLMG00005000844 ENSCLMG00005000847 #22 LSM14A (ENSCLMG00005000848) #22 HDGFL3 (ENSCLMG00005000852) rbb4l (ENSCLMG00005000862) txlng (ENSCLMG00005000905) ccdc102a (ENSCLMG00005000914) DOK4 (ENSCLMG00005000915) PCSK6 (ENSCLMG00005000916) ENSCLMG00005000922 PLEKHF1 (ENSCLMG00005000924) pop4 (ENSCLMG00005000926) tpcn2 (ENSCLMG00005000927) nadsyn1 (ENSCLMG00005000929) ZRSR2 (ENSCLMG00005000944) ap1s2 (ENSCLMG00005000950) PHKA2 (ENSCLMG00005000984) ENSCLMG00005000994 Stickleback MODERN SPECIES 1 ENSGACG00000014696 ENSGACG00000014694 ENSGACG00000014688 cyp1a (ENSGACG00000014674) edc3 (ENSGACG00000014671) CSK (ENSGACG00000014659) cplx3a (ENSGACG00000014657) ulk3 (ENSGACG00000014651) ENSGACG00000014631 tm2d3 (ENSGACG00000014624) larp6a (ENSGACG00000014622) ENSGACG00000014619 THSD4 (ENSGACG00000014615) pepd (ENSGACG00000014582) #19 KCTD15 (ENSGACG00000014575) LSM14A (ENSGACG00000014572) #22 HDGFL3 (ENSGACG00000014568) rbb4l (ENSGACG00000014552) txlng (ENSGACG00000014550) ENSGACG00000014549 ccdc102a (ENSGACG00000014543) DOK4 (ENSGACG00000014541) nadsyn1 (ENSGACG00000014530) tpcn2 (ENSGACG00000014526) ENSGACG00000014524 ENSGACG00000014522 pop4 (ENSGACG00000014510) ENSGACG00000014509 PLEKHF1 (ENSGACG00000014507) ENSGACG00000014504 PCSK6 (ENSGACG00000014499) Perciformes_a ANCESTRAL SPECIES 13 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.c ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Channel bull blenny MODERN SPECIES 17 ENSCGOG00000000982 ENSCGOG00000000971 PDPR (ENSCGOG00000000920) mrps11 (ENSCGOG00000000914) mrpl46 (ENSCGOG00000000913) NTRK3 (ENSCGOG00000000853) ENSCGOG00000000842 ENSCGOG00000000840 sv2ba (ENSCGOG00000000812) mespba (ENSCGOG00000000799) mespaa (ENSCGOG00000000796) ANPEP (ENSCGOG00000000704) ap3s2 (ENSCGOG00000000654) ENSCGOG00000000647 ENSCGOG00000000644 lsm14ab (ENSCGOG00000000640) #22 ss18l2 (ENSCGOG00000000637) GARRE1 (ENSCGOG00000000516) #23 gpib (ENSCGOG00000024133) #25 wtip (ENSCGOG00000024096) #28 sdr42e1 (ENSCGOG00000024095) cnep1r1 (ENSCGOG00000024091) heatr3 (ENSCGOG00000024017) tent4b (ENSCGOG00000024003) adcy7 (ENSCGOG00000023963) brd7 (ENSCGOG00000023953) nkd1 (ENSCGOG00000023948) nod2 (ENSCGOG00000023937) CYLD (ENSCGOG00000023831) sall1a (ENSCGOG00000023814) ENSCGOG00000023809 Pike perch MODERN SPECIES 56 edc3 (ENSSLUG00000011220) CSK (ENSSLUG00000011261) cplx3a (ENSSLUG00000011793) ENSSLUG00000011800 ulk3 (ENSSLUG00000011816) ENSSLUG00000012048 tm2d3 (ENSSLUG00000015491) larp6a (ENSSLUG00000015497) ENSSLUG00000015508 THSD4 (ENSSLUG00000015530) ENSSLUG00000015559 pepd (ENSSLUG00000015625) #19 CHST8 (ENSSLUG00000016329) #20 KCTD15 (ENSSLUG00000016331) ENSSLUG00000016335 lsm14ab (ENSSLUG00000016346) #22 ss18l2 (ENSSLUG00000016355) GARRE1 (ENSSLUG00000016368) #23 gpib (ENSSLUG00000016442) #25 wtip (ENSSLUG00000017397) #28 sdr42e1 (ENSSLUG00000017458) zgc:101040 (ENSSLUG00000017466) cnep1r1 (ENSSLUG00000017474) heatr3 (ENSSLUG00000017500) tent4b (ENSSLUG00000017587) adcy7 (ENSSLUG00000017706) brd7 (ENSSLUG00000019658) nkd1 (ENSSLUG00000019666) nod2 (ENSSLUG00000019680) CYLD (ENSSLUG00000019846) sall1a (ENSSLUG00000019875) Eupecaria_C ANCESTRAL SPECIES 11 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.d.a ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a Gilthead seabream MODERN SPECIES 18 edc3 (ENSSAUG00010023398) CSK (ENSSAUG00010023231) cplx3a (ENSSAUG00010023222) ENSSAUG00010023221 ulk3 (ENSSAUG00010023220) ENSSAUG00010020396 tm2d3 (ENSSAUG00010020323) larp6a (ENSSAUG00010020321) LRRC49 (ENSSAUG00010020318) THSD4 (ENSSAUG00010020295) pepd (ENSSAUG00010020282) #19 ENSSAUG00010020276 CHST8 (ENSSAUG00010020275) #20 KCTD15 (ENSSAUG00010020273) ENSSAUG00010020271 lsm14ab (ENSSAUG00010020270) #22 ss18l2 (ENSSAUG00010020268) GARRE1 (ENSSAUG00010020252) #23 gpib (ENSSAUG00010019701) #25 wtip (ENSSAUG00010019683) #28 sdr42e1 (ENSSAUG00010019681) C19orf12 (ENSSAUG00010019680) C19orf12 (ENSSAUG00010019677) zgc:101040 (ENSSAUG00010019675) cnep1r1 (ENSSAUG00010019661) heatr3 (ENSSAUG00010018924) tent4b (ENSSAUG00010018910) adcy7 (ENSSAUG00010016558) brd7 (ENSSAUG00010016523) nkd1 (ENSSAUG00010016522) nod2 (ENSSAUG00010016509) Eupercaria_incertae_sedis ANCESTRAL SPECIES 7 ENSGT00950000183037.A.a ENSGT00390000016435.g.b ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 ENSGT00390000012054.b.d.a ENSGT00390000008576 ENSGT00390000012529 ENSGT00940000158301 ENSGT00940000159096 ENSGT00950000183170.a ENSGT00440000033589.c ENSGT00940000160934 ENSGT00390000018123.a.a ENSGT00940000155938.b.a European seabass MODERN SPECIES 18 ENSDLAG00005023100 CYP1A2 (ENSDLAG00005023109) ENSDLAG00005030853 CSK (ENSDLAG00005023158) ENSDLAG00005033157 ENSDLAG00005023333 ULK3 (ENSDLAG00005023334) ENSDLAG00005023387 LARP6 (ENSDLAG00005024448) ENSDLAG00005024451 THSD4 (ENSDLAG00005024464) PEPD (ENSDLAG00005032315) #19 CHST8 (ENSDLAG00005024494) #20 KCTD15 (ENSDLAG00005027432) ENSDLAG00005029772 lsm14ab (ENSDLAG00005030677) #22 ss18l2 (ENSDLAG00005024522) ENSDLAG00005024531 #23 gpib (ENSDLAG00005024556) #25 wtip (ENSDLAG00005024678) #28 sdr42e1 (ENSDLAG00005026879) heatr3 (ENSDLAG00005030804) tent4b (ENSDLAG00005024732) adcy7 (ENSDLAG00005024782) brd7 (ENSDLAG00005024941) nkd1 (ENSDLAG00005032053) nod2 (ENSDLAG00005024955) CYLD (ENSDLAG00005025000) sall1a (ENSDLAG00005025026) TOX3 (ENSDLAG00005025035) ENSDLAG00005025130 Large yellow croaker MODERN SPECIES 480 cyp1a (ENSLCRG00005012519) edc3 (ENSLCRG00005012518) CSK (ENSLCRG00005010929) cplx3a (ENSLCRG00005010917) ENSLCRG00005010915 ulk3 (ENSLCRG00005010912) ENSLCRG00005006082 tm2d3 (ENSLCRG00005006062) larp6a (ENSLCRG00005006061) ENSLCRG00005006059 THSD4 (ENSLCRG00005006051) pepd (ENSLCRG00005004509) #19 ENSLCRG00005004488 KCTD15 (ENSLCRG00005004485) ENSLCRG00005004477 lsm14ab (ENSLCRG00005004476) #22 ss18l2 (ENSLCRG00005004473) GARRE1 (ENSLCRG00005004472) #23 gpib (ENSLCRG00005004325) #25 wtip (ENSLCRG00005004236) #28 sdr42e1 (ENSLCRG00005004234) ENSLCRG00005004232 ENSLCRG00005004230 cnep1r1 (ENSLCRG00005004229) heatr3 (ENSLCRG00005004088) tent4b (ENSLCRG00005003591) adcy7 (ENSLCRG00005003141) brd7 (ENSLCRG00005002572) nkd1 (ENSLCRG00005002547) NOD2 (ENSLCRG00005002376) CYLD (ENSLCRG00005023716) Tetraodontidae ANCESTRAL SPECIES 158 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 Fugu MODERN SPECIES 4 SNAP25 (ENSTRUG00000015620) cox5aa (ENSTRUG00000015647) fam219b (ENSTRUG00000022531) ENSTRUG00000024094 ENSTRUG00000024639 ENSTRUG00000024847 THSD4 (ENSTRUG00000028384) ENSTRUG00000015724 fgf3 (ENSTRUG00000027654) lto1 (ENSTRUG00000026152) ccnd1 (ENSTRUG00000015754) ENSTRUG00000029359 CHST8 (ENSTRUG00000020165) #20 KCTD15 (ENSTRUG00000015783) ENSTRUG00000015791 lsm14ab (ENSTRUG00000015798) #22 ss18l2 (ENSTRUG00000026985) GARRE1 (ENSTRUG00000015836) #23 gpib (ENSTRUG00000015872) #25 wtip (ENSTRUG00000024569) #28 sdr42e1 (ENSTRUG00000015985) uqcrfs1 (ENSTRUG00000015996) ENSTRUG00000033010 ENSTRUG00000032511 ENSTRUG00000028997 ENSTRUG00000019679 spg21 (ENSTRUG00000000560) shcbp1 (ENSTRUG00000000594) mthfs (ENSTRUG00000019947) fah (ENSTRUG00000000711) arnt2 (ENSTRUG00000000793) Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 zgc:66427 (ENSTNIG00000004224) ENSTNIG00000004225 ENSTNIG00000004226 ENSTNIG00000000576 apol1 (ENSTNIG00000004227) ENSTNIG00000018700 mfsd12a (ENSTNIG00000018699) csnk1g2a (ENSTNIG00000018698) mrpl37 (ENSTNIG00000018697) ACOT11 (ENSTNIG00000018696) ENSTNIG00000001571 xpr1b (ENSTNIG00000007175) DIP2C (ENSTNIG00000006612) KCTD15 (ENSTNIG00000010524) ENSTNIG00000010523 lsm14ab (ENSTNIG00000010522) #22 ss18l2 (ENSTNIG00000010521) GARRE1 (ENSTNIG00000010520) #23 gpib (ENSTNIG00000010519) #25 wtip (ENSTNIG00000010518) #28 sdr42e1 (ENSTNIG00000005014) ONECUT2 (ENSTNIG00000003240) WDR7 (ENSTNIG00000003136) ccng2 (ENSTNIG00000003135) ccni (ENSTNIG00000003134) ENSTNIG00000003133 ccni (ENSTNIG00000000306) ENSTNIG00000003132 ENSTNIG00000003130 ENSTNIG00000001499 ENSTNIG00000003129 Tetraodon MODERN SPECIES 26 ENSTNIG00000019708 ENSTNIG00000019769 ENSTNIG00000019801 stc1 (ENSTNIG00000019446) mrpl27 (ENSTNIG00000019792) ENSTNIG00000019479 ENSTNIG00000002327 ENSTNIG00000019790 ENSTNIG00000019456 nedd9 (ENSTNIG00000019565) ENSTNIG00000019709 EXT1 (ENSTNIG00000019725) TBC1D14 (ENSTNIG00000019846) ENSTNIG00000001486 ENSTNIG00000019612 ENSTNIG00000019498 #22 ENSTNIG00000019811 ENSTNIG00000019452 ENSTNIG00000019549 elmod1 (ENSTNIG00000019581) ENSTNIG00000019676 ENSTNIG00000019692 ENSTNIG00000001882 ENSTNIG00000019478 ENSTNIG00000019597 ENSTNIG00000019666 ENSTNIG00000019487 cldn10b (ENSTNIG00000019488) ABCC4 (ENSTNIG00000019489) ENSTNIG00000019544 ENSTNIG00000019838 Clupeocephala ANCESTRAL SPECIES 15 ENSGT00940000157431.c.a ENSGT00950000183113.b.a ENSGT00940000157431.d ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00940000159496.l ENSGT00940000159100.h #20 ENSGT00940000155981.h ENSGT00940000156037.a.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.b.f ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00390000000707.y.b #25 ENSGT00940000160924 #28 ENSGT00940000158070 Euteleosteomorpha ANCESTRAL SPECIES 419 ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 Protacanthopterygii ANCESTRAL SPECIES 29 ENSGT00940000161051.a.a.b.b.b.b ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00940000168658 ENSGT00390000011055 ENSGT00940000158153.a.i ENSGT00940000160214 ENSGT00390000001116 ENSGT00940000156429.t ENSGT00950000182885.A.b ENSGT00940000154318.A.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00940000158301.l ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00520000055620.B ENSGT00940000159483.a.a ENSGT00940000157021 ENSGT00420000029847 #8 ENSGT00390000009456 #11 ENSGT00940000156469.a #16 ENSGT00550000075019 ENSGT00940000156131.a.a ENSGT00940000156482.c Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 91 ENSGT00940000161051.a.a.b.b.b.b ENSGT00390000000972.f ENSGT00940000157033.h.h ENSGT00940000156088.c.b.h ENSGT00940000168658 ENSGT00390000011055 ENSGT00940000158153.a.i.a ENSGT00940000160214 ENSGT00390000001116.g ENSGT00940000156429.t.b ENSGT00950000182885.A.b ENSGT00940000154318.A.b ENSGT00940000159100.h.j #20 ENSGT00940000159496.l.j ENSGT00390000011620.b.e.f ENSGT00940000154415.lb.b.a #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00940000158301.l.b ENSGT00530000063759.a ENSGT00940000155938.b.b.b ENSGT00950000183202.a.b.x.b ENSGT00520000055620.B.g.b ENSGT00940000159483.a.a.e ENSGT00940000157021.r ENSGT00420000029847 #8 ENSGT00390000009456.o #11 ENSGT00940000156469.a.b #16 ENSGT00550000075019 ENSGT00940000156131.a.a.f Salmoninae_a ANCESTRAL SPECIES 1 ENSGT00940000156088.c.a.c.a ENSGT00940000157212.B.i ENSGT00940000166983 ENSGT00940000168658 ENSGT00390000011055 ENSGT00940000158153.a.i.b ENSGT00940000158153.a.i.a ENSGT00940000160214 ENSGT00390000001116.g ENSGT00940000156429.t.b ENSGT00950000182885.A.b ENSGT00940000154318.A.b ENSGT00940000159100.h.j #20 ENSGT00940000159496.l.j ENSGT00390000011620.b.e.f ENSGT00940000154415.lb.b.a #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00940000158301.l.b ENSGT00530000063759.a ENSGT00940000155938.b.b.b ENSGT00950000183202.a.b.x.b ENSGT00520000055620.B.g.b ENSGT00940000159483.a.a.e ENSGT00940000157021.r ENSGT00420000029847 #8 ENSGT00390000009456.o #11 ENSGT00940000156469.a.b #16 ENSGT00550000075019 ENSGT00940000156131.a.a.f Salmo ANCESTRAL SPECIES 45 ENSGT00940000158293.mb ENSGT00940000161051.a.a.b.b.b.b ENSGT00390000000972.f ENSGT00940000157033.h.h ENSGT00940000156088.c.b.h ENSGT00940000168658.h ENSGT00940000158153.a.i.a ENSGT00940000160214 ENSGT00390000001116.g ENSGT00940000156429.t.b ENSGT00950000182885.A.b ENSGT00940000154318.A.b ENSGT00940000159100.h.j #20 ENSGT00940000159496.l.j ENSGT00390000011620.b.e.f ENSGT00940000154415.lb.b.a #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00940000158301.l.b ENSGT00530000063759.a ENSGT00940000155938.b.b.b ENSGT00950000183202.a.b.x.b ENSGT00520000055620.B.g.b ENSGT00940000159483.a.a.e ENSGT00940000157021.r ENSGT00420000029847 #8 ENSGT00390000009456.o #11 ENSGT00940000156469.a.b #16 ENSGT00550000075019 ENSGT00940000156131.a.a.f River trout MODERN SPECIES 37 ENSSTUG00000037941 nup160 (ENSSTUG00000037360) frs2b (ENSSTUG00000037324) PTPRB (ENSSTUG00000035321) ENSSTUG00000035212 ZFC3H1 (ENSSTUG00000035135) ENSSTUG00000035125 tbc1d15 (ENSSTUG00000031508) tph2 (ENSSTUG00000030527) ENSSTUG00000028670 CHST8 (ENSSTUG00000028629) #20 ENSSTUG00000028614 CHST8 (ENSSTUG00000028574) #20 kctd15a (ENSSTUG00000028563) ENSSTUG00000028474 lsm14aa (ENSSTUG00000028457) #22 gpia (ENSSTUG00000027700) #25 hsd17b2 (ENSSTUG00000027667) mphosph6 (ENSSTUG00000027656) TENT4B (ENSSTUG00000027589) SNX20 (ENSSTUG00000027582) SALL1 (ENSSTUG00000027572) RBL2 (ENSSTUG00000027505) IRX5 (ENSSTUG00000027497) ANKRD27 (ENSSTUG00000027413) ENSSTUG00000027377 #8 faap24 (ENSSTUG00000027369) #11 SLC7A10 (ENSSTUG00000027339) #16 DUS2 (ENSSTUG00000027116) ENSSTUG00000027098 amfra (ENSSTUG00000026580) Atlantic salmon MODERN SPECIES 1 cftr (ENSSSAG00000068465) ENSSSAG00000068414 ENSSSAG00000068410 ENSSSAG00000067254 ENSSSAG00000067217 ENSSSAG00000065309 ENSSSAG00000065163 ENSSSAG00000107405 ENSSSAG00000065133 ENSSSAG00000059489 ENSSSAG00000058616 ENSSSAG00000058580 CHST8 (ENSSSAG00000058555) #20 KCTD15 (ENSSSAG00000091155) ENSSSAG00000058489 lsm14aa (ENSSSAG00000058467) #22 GPI (ENSSSAG00000055699) #25 hsd17b2 (ENSSSAG00000103360) ENSSSAG00000055348 ENSSSAG00000120378 ENSSSAG00000055327 ENSSSAG00000055151 ENSSSAG00000055119 ENSSSAG00000055101 ENSSSAG00000054852 ENSSSAG00000099467 ENSSSAG00000054761 #8 faap24 (ENSSSAG00000111213) #11 ENSSSAG00000090580 #16 ENSSSAG00000051983 ENSSSAG00000082477 Oncorhynchus ANCESTRAL SPECIES 10 ENSGT00950000183039.A.c ENSGT00940000156088.c.a.c.a ENSGT00940000157212.B.i ENSGT00940000166983 ENSGT00940000168658 ENSGT00390000011055 ENSGT00940000158153.a.i.a ENSGT00940000160214 ENSGT00390000001116.g ENSGT00940000156429.t.b ENSGT00950000182885.A.b ENSGT00940000154318.A.b ENSGT00940000159100.h.j #20 ENSGT00940000159496.l.j ENSGT00390000011620.b.e.f ENSGT00940000154415.lb.b.a #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00940000158301.l.b ENSGT00530000063759.a ENSGT00940000155938.b.b.b ENSGT00950000183202.a.b.x.b ENSGT00520000055620.B.g.b ENSGT00940000159483.a.a.e ENSGT00940000157021.r ENSGT00420000029847 #8 ENSGT00390000009456.o #11 ENSGT00940000156469.a.b #16 ENSGT00550000075019 ENSGT00940000156131.a.a.f Rainbow trout MODERN SPECIES 11 ENSOMYG00000051537 cftr (ENSOMYG00000012997) ENSOMYG00000071446 ENSOMYG00000012710 ENSOMYG00000012696 ENSOMYG00000012677 ENSOMYG00000012013 ENSOMYG00000011831 ENSOMYG00000011715 ENSOMYG00000011036 ENSOMYG00000010750 ENSOMYG00000010685 CHST8 (ENSOMYG00000010677) #20 KCTD15 (ENSOMYG00000010672) ENSOMYG00000010647 ENSOMYG00000063934 #22 gpia (ENSOMYG00000010468) #25 hsd17b2 (ENSOMYG00000010229) mphosph6 (ENSOMYG00000010223) ENSOMYG00000010133 ENSOMYG00000010055 ENSOMYG00000058232 ENSOMYG00000010051 ENSOMYG00000009205 ENSOMYG00000053257 ENSOMYG00000008919 ENSOMYG00000061906 ENSOMYG00000008891 ENSOMYG00000008764 #8 faap24 (ENSOMYG00000008686) #11 ENSOMYG00000008646 #16 Oncorhynchus_a ANCESTRAL SPECIES 5 ENSGT00880000138051.a.e ENSGT00940000158567.f ENSGT00940000158293.mb ENSGT00940000161051.a.a.b.b.b.b ENSGT00390000000972.f ENSGT00940000157033.h.h ENSGT00940000156088.c.b.h ENSGT00940000160214 ENSGT00390000001116.g ENSGT00940000156429.t.b ENSGT00950000182885.A.b ENSGT00940000154318.A.b ENSGT00940000159100.h.j #20 ENSGT00940000159496.l.j ENSGT00390000011620.b.e.f ENSGT00940000154415.lb.b.a #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00940000158301.l.b ENSGT00530000063759.a ENSGT00940000155938.b.b.b ENSGT00950000183202.a.b.x.b ENSGT00520000055620.B.g.b ENSGT00940000159483.a.a.e ENSGT00940000157021.r ENSGT00420000029847 #8 ENSGT00390000009456.o #11 ENSGT00940000156469.a.b #16 ENSGT00550000075019 ENSGT00940000156131.a.a.f Coho salmon MODERN SPECIES 14 cftr (ENSOKIG00005047693) ENSOKIG00005047421 ENSOKIG00005047414 NUP160 (ENSOKIG00005047276) FRS2 (ENSOKIG00005047219) PTPRB (ENSOKIG00005046641) ENSOKIG00005046559 ENSOKIG00005046523 tbc1d15 (ENSOKIG00005045662) tph2 (ENSOKIG00005045079) ENSOKIG00005045014 CHST8 (ENSOKIG00005045003) #20 ENSOKIG00005044996 KCTD15 (ENSOKIG00005044989) ENSOKIG00005044973 lsm14aa (ENSOKIG00005044921) #22 gpia (ENSOKIG00005040066) #25 hsd17b2 (ENSOKIG00005039793) mphosph6 (ENSOKIG00005039772) ENSOKIG00005039482 SNX20 (ENSOKIG00005039443) SALL1 (ENSOKIG00005039429) RBL2 (ENSOKIG00005039040) ENSOKIG00005038970 IRX5 (ENSOKIG00005038960) ANKRD27 (ENSOKIG00005038857) ENSOKIG00005038784 #8 faap24 (ENSOKIG00005038774) #11 SLC7A10 (ENSOKIG00005038586) #16 DUS2 (ENSOKIG00005037660) ENSOKIG00005037588 Chinook salmon MODERN SPECIES 10 asz1 (ENSOTSG00005017193) cftr (ENSOTSG00005011712) ENSOTSG00005011695 ENSOTSG00005011694 ENSOTSG00005011693 frs2b (ENSOTSG00005011691) PTPRB (ENSOTSG00005008974) LGR5 (ENSOTSG00005008966) ENSOTSG00005008963 tbc1d15 (ENSOTSG00005006836) tph2 (ENSOTSG00005006563) ENSOTSG00005006560 CHST8 (ENSOTSG00005006558) #20 kctd15a (ENSOTSG00005006555) ENSOTSG00005040169 lsm14aa (ENSOTSG00005040167) #22 gpia (ENSOTSG00005039480) #25 hsd17b2 (ENSOTSG00005039471) mphosph6 (ENSOTSG00005039468) tent4b (ENSOTSG00005039351) SNX20 (ENSOTSG00005039338) SALL1 (ENSOTSG00005039333) RBL2 (ENSOTSG00005039041) IRX5 (ENSOTSG00005039029) ANKRD27 (ENSOTSG00005038903) ENSOTSG00005038876 #8 faap24 (ENSOTSG00005038871) #11 SLC7A10 (ENSOTSG00005038869) #16 DUS2 (ENSOTSG00005038831) ENSOTSG00005038820 amfra (ENSOTSG00005038786) Huchen MODERN SPECIES 890 ENSHHUG00000029069 ENSHHUG00000029067 ENSHHUG00000029063 CHST8 (ENSHHUG00000029061) #20 ENSHHUG00000029060 kctd15a (ENSHHUG00000029052) ENSHHUG00000029013 lsm14aa (ENSHHUG00000029006) #22 gpia (ENSHHUG00000028573) #25 hsd17b2 (ENSHHUG00000028570) mphosph6 (ENSHHUG00000028558) TENT4B (ENSHHUG00000028550) SALL1 (ENSHHUG00000028547) SNX20 (ENSHHUG00000028543) RBL2 (ENSHHUG00000028514) ENSHHUG00000028511 IRX5 (ENSHHUG00000028510) ANKRD27 (ENSHHUG00000028469) ENSHHUG00000028368 #8 faap24 (ENSHHUG00000028357) #11 SLC7A10 (ENSHHUG00000028314) #16 DUS2 (ENSHHUG00000028273) ENSHHUG00000028264 Salmoninae ANCESTRAL SPECIES 457 ENSGT00940000158022.n ENSGT00950000183119.b.h ENSGT00390000000873.a.b.g ENSGT00940000159231.d ENSGT00880000138051.a.f ENSGT00940000158567.e ENSGT00940000158293.lb ENSGT00390000000972.e ENSGT00940000157033.h.g ENSGT00940000156088.c.b.g ENSGT00390000001116.h ENSGT00940000156429.t.a ENSGT00940000159100.h.i #20 ENSGT00940000159496.l.i ENSGT00390000011620.b.e.e ENSGT00940000154415.lb.b.b #22 Salmoninae_a ANCESTRAL SPECIES 83 ENSGT00940000158022.n ENSGT00950000183119.b.h ENSGT00390000000873.a.b.g ENSGT00940000159231.d ENSGT00880000138051.a.f ENSGT00940000158567.e ENSGT00940000158293.lb ENSGT00390000000972.e ENSGT00940000157033.h.g ENSGT00940000156088.c.b.g ENSGT00390000001116.h ENSGT00940000156429.t.a ENSGT00940000159100.h.i #20 ENSGT00940000159496.l.i ENSGT00390000011620.b.e.e ENSGT00940000154415.lb.b.b #22 ENSGT00940000158301.l.a ENSGT00940000155938.b.b.a ENSGT00950000183202.a.b.x.a ENSGT00520000055620.B.g.a ENSGT00940000159483.a.a.f ENSGT00940000157021.q ENSGT00390000009456.p #11 ENSGT00940000156469.a.a #16 ENSGT00940000156131.a.a.e ENSGT00940000160513.b.a ENSGT00550000075044.c.a ENSGT00390000010382.d ENSGT00940000156003.l.a.q ENSGT00940000162514 ENSGT00950000183011.c.a.b.f.c Salmo ANCESTRAL SPECIES 65 ENSGT00940000158022.n ENSGT00950000183119.b.h ENSGT00390000000873.a.b.g ENSGT00940000159231.d ENSGT00880000138051.a.f ENSGT00940000158567.e ENSGT00940000158293.lb ENSGT00390000000972.e ENSGT00940000157033.h.g ENSGT00940000156088.c.b.g ENSGT00390000001116.h ENSGT00940000156429.t.a ENSGT00940000159100.h.i #20 ENSGT00940000159496.l.i ENSGT00390000011620.b.e.e ENSGT00940000154415.lb.b.b #22 ENSGT00940000158301.l.a ENSGT00940000155938.b.b.a ENSGT00950000183202.a.b.x.a ENSGT00520000055620.B.g.a ENSGT00940000159483.a.a.f ENSGT00940000157021.q ENSGT00940000156469.a.a #16 ENSGT00940000156131.a.a.e ENSGT00940000156482.c.h ENSGT00550000075044.c.a ENSGT00940000160513.b.a ENSGT00390000010382.d ENSGT00940000156003.l.a.q ENSGT00940000162514 ENSGT00950000183011.c.a.b.f.c River trout MODERN SPECIES 8 met (ENSSTUG00000020733) ENSSTUG00000020591 ST7 (ENSSTUG00000017299) wnt2 (ENSSTUG00000017200) asz1 (ENSSTUG00000017165) cftr (ENSSTUG00000008374) CTTNBP2 (ENSSTUG00000008192) nup160 (ENSSTUG00000008048) frs2b (ENSSTUG00000008038) PTPRB (ENSSTUG00000007393) ZFC3H1 (ENSSTUG00000007266) tbc1d15 (ENSSTUG00000005227) CHST8 (ENSSTUG00000005152) #20 kctd15a (ENSSTUG00000005136) ENSSTUG00000005087 lsm14aa (ENSSTUG00000005011) #22 GOLPH3 (ENSSTUG00000004973) tent4b (ENSSTUG00000004864) SALL1 (ENSSTUG00000004804) RBL2 (ENSSTUG00000004200) rpgrip1l (ENSSTUG00000003145) IRX5 (ENSSTUG00000003101) ANKRD27 (ENSSTUG00000002896) SLC7A10 (ENSSTUG00000002705) #16 ENSSTUG00000002665 amfra (ENSSTUG00000033901) LRRN3 (ENSSTUG00000033874) immp2l (ENSSTUG00000033854) bmt2 (ENSSTUG00000033838) lamb1a (ENSSTUG00000025697) lamb4 (ENSSTUG00000025200) Atlantic salmon MODERN SPECIES 7 met (ENSSSAG00000043126) capza2 (ENSSSAG00000045617) ST7 (ENSSSAG00000045880) wnt2 (ENSSSAG00000051639) asz1 (ENSSSAG00000051643) cftr (ENSSSAG00000051689) ENSSSAG00000052354 nup160 (ENSSSAG00000052407) ENSSSAG00000113660 ENSSSAG00000052924 ENSSSAG00000055782 ENSSSAG00000055845 CHST8 (ENSSSAG00000061387) #20 ENSSSAG00000106661 ENSSSAG00000061512 LSM14A (ENSSSAG00000082344) #22 ENSSSAG00000061656 ENSSSAG00000062773 ENSSSAG00000116904 ENSSSAG00000062821 ENSSSAG00000064592 ENSSSAG00000083462 ENSSSAG00000109682 ENSSSAG00000066328 ENSSSAG00000066231 ENSSSAG00000100300 #16 ENSSSAG00000068156 ENSSSAG00000068162 ENSSSAG00000120751 ENSSSAG00000106237 ENSSSAG00000102267 Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00940000158022.n ENSGT00950000183119.b.h ENSGT00390000000873.a.b.g ENSGT00940000159231.d ENSGT00880000138051.a.f ENSGT00940000158567.e ENSGT00940000158293.lb ENSGT00390000000972.e ENSGT00940000157033.h.g ENSGT00940000156088.c.b.g ENSGT00390000001116.h ENSGT00940000156429.t.a ENSGT00940000159100.h.i #20 ENSGT00940000159496.l.i ENSGT00390000011620.b.e.e ENSGT00940000154415.lb.b.b #22 ENSGT00940000158301.l.a ENSGT00940000155938.b.b.a ENSGT00950000183202.a.b.x.a ENSGT00520000055620.B.g.a ENSGT00940000159483.a.a.f ENSGT00940000157021.q ENSGT00390000009456.p #11 ENSGT00940000156469.a.a #16 ENSGT00940000156131.a.a.e ENSGT00940000160513.b.a ENSGT00550000075044.d ENSGT00390000010382.d ENSGT00940000156003.l.a.q ENSGT00940000162514 ENSGT00950000183011.c.a.b.f.c Rainbow trout MODERN SPECIES ST7 (ENSOMYG00000021810) wnt2 (ENSOMYG00000021713) asz1 (ENSOMYG00000021664) ENSOMYG00000073421 cftr (ENSOMYG00000020983) ENSOMYG00000020700 ENSOMYG00000020618 ENSOMYG00000020576 ENSOMYG00000020357 ENSOMYG00000020203 ENSOMYG00000061687 ENSOMYG00000017733 CHST8 (ENSOMYG00000017454) #20 ENSOMYG00000017427 ENSOMYG00000017384 LSM14A (ENSOMYG00000017365) #22 ENSOMYG00000017224 ENSOMYG00000017212 ENSOMYG00000016162 ENSOMYG00000059179 ENSOMYG00000015024 ENSOMYG00000068911 ENSOMYG00000014902 ENSOMYG00000014824 faap24 (ENSOMYG00000014722) #11 ENSOMYG00000014631 #16 ENSOMYG00000071081 ENSOMYG00000014603 ENSOMYG00000062053 ENSOMYG00000014599 ENSOMYG00000014586 Oncorhynchus_a ANCESTRAL SPECIES 1 ENSGT00940000158022.n ENSGT00950000183119.b.h ENSGT00390000000873.a.b.g ENSGT00940000159231.d ENSGT00880000138051.a.f ENSGT00940000158567.e ENSGT00940000158293.lb ENSGT00390000000972.e ENSGT00940000157033.h.g ENSGT00940000156088.c.b.g ENSGT00390000001116.h ENSGT00940000156429.t.a ENSGT00940000159100.h.i #20 ENSGT00940000159496.l.i ENSGT00390000011620.b.e.e ENSGT00940000154415.lb.b.b #22 ENSGT00940000158301.l.a ENSGT00940000155938.b.b.a ENSGT00950000183202.a.b.x.a ENSGT00520000055620.B.g.a ENSGT00940000159483.a.a.f ENSGT00940000157021.q ENSGT00390000009456.p #11 ENSGT00940000156469.a.a #16 ENSGT00940000156131.a.a.e ENSGT00940000160513.b.a ENSGT00550000075044.d ENSGT00390000010382.d ENSGT00940000156003.l.a.q ENSGT00940000162514 ENSGT00950000183011.c.a.b.f.c Chinook salmon MODERN SPECIES 30 ENSOTSG00005035972 ST7 (ENSOTSG00005030603) wnt2 (ENSOTSG00005030570) asz1 (ENSOTSG00005030569) cftr (ENSOTSG00005029858) CTTNBP2 (ENSOTSG00005029843) nup160 (ENSOTSG00005029842) frs2b (ENSOTSG00005029839) PTPRB (ENSOTSG00005029780) ZFC3H1 (ENSOTSG00005029775) tbc1d15 (ENSOTSG00005029358) ENSOTSG00005029352 CHST8 (ENSOTSG00005029350) #20 kctd15a (ENSOTSG00005029348) ENSOTSG00005029341 lsm14aa (ENSOTSG00005029338) #22 tent4b (ENSOTSG00005029334) SALL1 (ENSOTSG00005029332) RBL2 (ENSOTSG00005029192) rpgrip1l (ENSOTSG00005028387) IRX5 (ENSOTSG00005028373) ANKRD27 (ENSOTSG00005028370) faap24 (ENSOTSG00005028368) #11 SLC7A10 (ENSOTSG00005027957) #16 ENSOTSG00005027952 LRRN3 (ENSOTSG00005027951) immp2l (ENSOTSG00005027949) bmt2 (ENSOTSG00005027947) lamb1a (ENSOTSG00005015167) lamb4 (ENSOTSG00005015132) AMPD3 (ENSOTSG00005014953) Coho salmon MODERN SPECIES 24 cav1 (ENSOKIG00005017117) met (ENSOKIG00005016627) ENSOKIG00005016563 ST7 (ENSOKIG00005015517) wnt2 (ENSOKIG00005015447) cftr (ENSOKIG00005015381) CTTNBP2 (ENSOKIG00005015326) nup160 (ENSOKIG00005015245) frs2b (ENSOKIG00005015212) PTPRB (ENSOKIG00005014685) ZFC3H1 (ENSOKIG00005014581) TBC1D15 (ENSOKIG00005011765) CHST8 (ENSOKIG00005011466) #20 KCTD15 (ENSOKIG00005011433) ENSOKIG00005011406 LSM14A (ENSOKIG00005011378) #22 TENT4B (ENSOKIG00005011314) SALL1 (ENSOKIG00005011299) RBL2 (ENSOKIG00005011148) rpgrip1l (ENSOKIG00005009469) IRX5 (ENSOKIG00005009348) ANKRD27 (ENSOKIG00005009231) faap24 (ENSOKIG00005009164) #11 SLC7A10 (ENSOKIG00005008505) #16 ENSOKIG00005008423 LRRN3 (ENSOKIG00005008415) immp2l (ENSOKIG00005008371) BMT2 (ENSOKIG00005008359) lamb1a (ENSOKIG00005007399) lamb4 (ENSOKIG00005007077) AMPD3 (ENSOKIG00005006881) Huchen MODERN SPECIES 951 ENSHHUG00000015639 nup160 (ENSHHUG00000015656) frs2b (ENSHHUG00000015684) PTPRB (ENSHHUG00000015693) ZFC3H1 (ENSHHUG00000016026) tbc1d15 (ENSHHUG00000016079) CHST8 (ENSHHUG00000016157) #20 kctd15a (ENSHHUG00000016160) ENSHHUG00000016174 LSM14A (ENSHHUG00000016196) #22 Northern pike MODERN SPECIES 18 agk (ENSELUG00000018420) dennd11 (ENSELUG00000018404) wee2 (ENSELUG00000018378) ENSELUG00000034307 bcl2l13 (ENSELUG00000018352) atp6v1e1a (ENSELUG00000018343) ENSELUG00000018292 ENSELUG00000018239 ADA2 (ENSELUG00000018180) GALNT8 (ENSELUG00000000739) ribc2 (ENSELUG00000018103) CHST8 (ENSELUG00000018093) #20 ENSELUG00000025420 kctd15a (ENSELUG00000018083) ENSELUG00000018066 lsm14aa (ENSELUG00000018038) #22 gpia (ENSELUG00000017973) #25 hsd17b2 (ENSELUG00000017899) mphosph6 (ENSELUG00000017839) tent4b (ENSELUG00000017815) SNX20 (ENSELUG00000017791) SALL1 (ENSELUG00000017774) RBL2 (ENSELUG00000017736) rpgrip1l (ENSELUG00000017693) ENSELUG00000017658 ENSELUG00000017634 IRX5 (ENSELUG00000017608) ANKRD27 (ENSELUG00000017570) ENSELUG00000031328 ENSELUG00000017494 #8 faap24 (ENSELUG00000028712) #11 Acanthomorphata ANCESTRAL SPECIES 244 ENSGT00940000160214 ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000154318.A.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00520000055620.B Euacanthomorphacea ANCESTRAL SPECIES 39 ENSGT00940000154856.A.a.c.a.b.a.a.b ENSGT00940000161051.a.a.b.b.b.b ENSGT00940000154856.A.a.c.a.b.a.a.a ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00940000160214 ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000154318.A.b ENSGT00940000178960 ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a Pinecone sodierfish MODERN SPECIES 20 ENSMMDG00005004122 ENSMMDG00005004020 ENSMMDG00005004008 nup160 (ENSMMDG00005020277) frs2b (ENSMMDG00005020201) PTPRB (ENSMMDG00005020188) june (ENSMMDG00005020178) ENSMMDG00005020172 ZFC3H1 (ENSMMDG00005020158) tbc1d15 (ENSMMDG00005019721) tph2 (ENSMMDG00005019624) ENSMMDG00005019618 CHST8 (ENSMMDG00005019614) #20 KCTD15 (ENSMMDG00005019610) ENSMMDG00005019608 lsm14aa (ENSMMDG00005019605) #22 gpia (ENSMMDG00005019325) #25 hsd17b2 (ENSMMDG00005019308) mphosph6 (ENSMMDG00005019307) SNX20 (ENSMMDG00005019304) SALL1 (ENSMMDG00005019302) RBL2 (ENSMMDG00005019300) IRX5 (ENSMMDG00005019299) rpgrip1l (ENSMMDG00005019013) NOX5 (ENSMMDG00005018806) ambra1b (ENSMMDG00005018757) ENSMMDG00005018745 mdkb (ENSMMDG00005018740) DGKZ (ENSMMDG00005010818) PHF21A (ENSMMDG00005009902) PRDM11 (ENSMMDG00005009874) Percomorphaceae ANCESTRAL SPECIES 31 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000154318.A.b ENSGT00940000178960 ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a Percomorphaceae_B ANCESTRAL SPECIES 5 ENSGT00940000163149.a.b.c.a.b ENSGT00940000167873 ENSGT00940000156003.l.a ENSGT00940000162514 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000154318.A.b ENSGT00940000178960 ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000175409 ENSGT00940000163250.A.b ENSGT00940000159483.a.a ENSGT00980000201244 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b Ovalentaria ANCESTRAL SPECIES 37 ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000178960 ENSGT00940000154318.A.b ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116 ENSGT00940000156088.c.b ENSGT00940000157033.h ENSGT00390000000972 ENSGT00940000163149.a.b.c.a.b ENSGT00940000165244.a ENSGT00940000156003.l.a Atherinomorphae ANCESTRAL SPECIES 73 ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116 ENSGT00940000156088.c.b ENSGT00940000157033.h ENSGT00390000000972 ENSGT00940000167873 ENSGT00940000163149.a.b.c.a.b ENSGT00940000165244.a ENSGT00940000156003.l.a Cyprinodontiformes ANCESTRAL SPECIES 70 ENSGT00940000156003.l.a ENSGT00940000165244.a ENSGT00940000163149.a.b.c.a.b ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000154318.A.b ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116 Aplocheiloidei ANCESTRAL SPECIES 97 ENSGT00950000183202.a.b ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00940000159100.h #20 ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00390000009212 ENSGT00530000063759.a Turquoise killifish MODERN SPECIES 1622 ENSNFUG00015022079 RPGRIP1L (ENSNFUG00015022052) NOX5 (ENSNFUG00015022021) ambra1b (ENSNFUG00015021989) MDKB (ENSNFUG00015021966) ENSNFUG00015021962 ENSNFUG00015021960 CU181898.3 (ENSNFUG00015021766) ENSNFUG00015021729 PHF21A (ENSNFUG00015021710) ENSNFUG00015021703 KCNJ11L (ENSNFUG00015021694) ENSNFUG00015021688 ENSNFUG00015021661 ENSNFUG00015021656 ENSNFUG00015021652 #22 GPI (ENSNFUG00015021157) #25 MPHOSPH6 (ENSNFUG00015021146) SNX20 (ENSNFUG00015021144) ZFC3H1 (ENSNFUG00015021134) TBC1D15 (ENSNFUG00015017940) tph2 (ENSNFUG00015017768) PTPRB (ENSNFUG00015017466) FRS2B (ENSNFUG00015017412) NUP160 (ENSNFUG00015017051) ENSNFUG00015017016 ENSNFUG00015013240 LAMB1 (ENSNFUG00015007776) ENSNFUG00015006851 ENSNFUG00015006791 TSPAN9B (ENSNFUG00015006782) Mangrove rivulus MODERN SPECIES 724 ENSKMAG00000007074 ENSKMAG00000007043 ENSKMAG00000007024 ENSKMAG00000007001 ENSKMAG00000006982 CHST8 (ENSKMAG00000006945) #20 ENSKMAG00000006890 lsm14aa (ENSKMAG00000006797) #22 Cyprinodontoidei ANCESTRAL SPECIES 7 ENSGT00940000162986.k.a.b.a ENSGT00390000003058.b.a.b ENSGT00950000182863.A.a.a.n ENSGT00940000157319 ENSGT00940000158102 ENSGT00940000156003.l.a ENSGT00940000165244.a ENSGT00940000163149.a.b.c.a.b ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000154318.A.b ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116 Poeciliinae ANCESTRAL SPECIES 3 ENSGT00940000160199 ENSGT00940000159662.c.b ENSGT00940000157667.c.d ENSGT00940000158481.c ENSGT00390000017249.f ENSGT00940000154294 ENSGT00990000203541.a.a.a.a.b ENSGT00580000081623 ENSGT00940000176894 ENSGT00940000177161 ENSGT00940000159982 ENSGT00940000159950 ENSGT00940000155728.o ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000178960 ENSGT00940000159100.h #20 ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116 ENSGT01100000263483.E.a.c.b.b.d ENSGT01100000263483.F.a ENSGT01100000263483.E.a.c.b.b.c.a.a.a ENSGT01100000263483.E.a.c.b.b.c.a.a.b.b ENSGT00950000183004.a.b.b ENSGT00640000091774.a.b ENSGT00990000203615.a.a.a.a Platyfish MODERN SPECIES 11 lmo2 (ENSXMAG00000025090) alx4b (ENSXMAG00000007283) tspan18b (ENSXMAG00000007280) cd82b (ENSXMAG00000029000) tp53i11b (ENSXMAG00000021035) ENSXMAG00000007244 LHFPL3 (ENSXMAG00000026242) RELN (ENSXMAG00000007226) ENSXMAG00000022042 ENSXMAG00000024870 ENSXMAG00000007204 ENSXMAG00000007186 PLEKHA5 (ENSXMAG00000007144) kctd15a (ENSXMAG00000007138) ENSXMAG00000027680 lsm14aa (ENSXMAG00000007117) #22 gpia (ENSXMAG00000007063) #25 mphosph6 (ENSXMAG00000027153) SNX20 (ENSXMAG00000027217) ENSXMAG00000025358 CHST8 (ENSXMAG00000007050) #20 tph2 (ENSXMAG00000026324) ENSXMAG00000024795 tbc1d15 (ENSXMAG00000006966) ENSXMAG00000006933 ENSXMAG00000006932 ENSXMAG00000006931 ENSXMAG00000026760 ENSXMAG00000022832 ENSXMAG00000006930 ENSXMAG00000027763 Poecilia ANCESTRAL SPECIES 5 ENSGT00940000160199 ENSGT00940000159662.c.b ENSGT00940000157667.c.d ENSGT00940000158481.c ENSGT00390000017249.f ENSGT00940000154294 ENSGT00990000203541.a.a.a.a.b ENSGT00580000081623 ENSGT00940000176894 ENSGT00940000177161 ENSGT00940000159982 ENSGT00940000159950 ENSGT00940000155728.o ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000159100.h #20 ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116 ENSGT01100000263483.E.a.c.b.b.d Guppy MODERN SPECIES 458 alx4b (ENSPREG00000016256) tspan18b (ENSPREG00000016274) cd82b (ENSPREG00000016305) tp53i11b (ENSPREG00000016411) ENSPREG00000016425 LHFPL3 (ENSPREG00000016436) ENSPREG00000016446 RELN (ENSPREG00000016476) ENSPREG00000016579 ENSPREG00000016590 ENSPREG00000016601 ENSPREG00000016651 PLEKHA5 (ENSPREG00000016724) KCTD15 (ENSPREG00000016789) ENSPREG00000016803 lsm14aa (ENSPREG00000016833) #22 gpia (ENSPREG00000016851) #25 ENSPREG00000016879 mphosph6 (ENSPREG00000016891) CHST8 (ENSPREG00000016901) #20 tph2 (ENSPREG00000016917) tbc1d15 (ENSPREG00000016943) ZFC3H1 (ENSPREG00000016974) ENSPREG00000017041 slc7a5 (ENSPREG00000017067) ca5a (ENSPREG00000017090) uba2 (ENSPREG00000017108) #27 ENSPREG00000017131 ENSPREG00000017139 ENSPREG00000017158 cpne2 (ENSPREG00000017190) NAME_6 ANCESTRAL SPECIES 155 ENSGT00940000153438.a.s ENSGT00940000160199 ENSGT00940000159662.c.b ENSGT00940000157667.c.d ENSGT00940000158481.c ENSGT00390000017249.f ENSGT00940000154294 ENSGT00990000203541.a.a.a.a.b ENSGT00580000081623 ENSGT00940000177161 ENSGT00940000159982 ENSGT00940000159950 ENSGT00940000155728.o ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000159100.h #20 ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116.c Amazon molly DUPLICATION Amazon molly MODERN SPECIES 928 KCTD15 (ENSPFOG00000000421) ENSPFOG00000000467 lsm14aa (ENSPFOG00000000534) #22 gpia (ENSPFOG00000000574) #25 mphosph6 (ENSPFOG00000000790) SNX20 (ENSPFOG00000000821) CHST8 (ENSPFOG00000000837) #20 tph2 (ENSPFOG00000024544) tbc1d15 (ENSPFOG00000001111) ENSPFOG00000001903 ENSPFOG00000002493 ENSPFOG00000022433 Amazon molly MODERN SPECIES 496 caprin1b (ENSPFOG00000022517) lmo2 (ENSPFOG00000012943) alx4b (ENSPFOG00000012946) tspan18b (ENSPFOG00000012979) cd82b (ENSPFOG00000013024) tp53i11b (ENSPFOG00000013070) ENSPFOG00000013098 LHFPL3 (ENSPFOG00000013114) RELN (ENSPFOG00000013155) ENSPFOG00000022421 PIK3C2G (ENSPFOG00000013736) ENSPFOG00000013930 PLEKHA5 (ENSPFOG00000014067) KCTD15 (ENSPFOG00000014270) ENSPFOG00000014290 lsm14aa (ENSPFOG00000014346) #22 Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 1030 ENSPLAG00000010552 ENSPLAG00000010534 PLEKHA5 (ENSPLAG00000010509) KCTD15 (ENSPLAG00000010489) ENSPLAG00000010467 lsm14aa (ENSPLAG00000010452) #22 Sailfin molly MODERN SPECIES 2513 KCTD15 (ENSPLAG00000004392) ENSPLAG00000004370 lsm14aa (ENSPLAG00000004359) #22 gpia (ENSPLAG00000004329) #25 mphosph6 (ENSPLAG00000004288) SNX20 (ENSPLAG00000004275) CHST8 (ENSPLAG00000004258) #20 NAME_4 ANCESTRAL SPECIES 30 ENSGT00940000162986.k.a.b.a ENSGT00390000003058.b.a.b ENSGT00950000182863.A.a.a.n ENSGT00940000157319 ENSGT00940000158102 ENSGT00940000156003.l.a ENSGT00940000165244.a ENSGT00940000163149.a.b.c.a.b ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000154318.A.b ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116 ENSGT01100000263483.E.a.c.b.b ENSGT00950000183004.a.b.b ENSGT00640000091774.a.b ENSGT00940000177432.a.a.b ENSGT00990000203615.a.a.a.a ENSGT00730000111696.b ENSGT00940000159837 ENSGT00940000164249.b.a.b.b Sheepshead minnow MODERN SPECIES 1018 CHST8 (ENSCVAG00000019335) #20 kctd15a (ENSCVAG00000019372) ENSCVAG00000019382 lsm14aa (ENSCVAG00000019400) #22 gpia (ENSCVAG00000019459) #25 mphosph6 (ENSCVAG00000019498) SNX20 (ENSCVAG00000019504) tph2 (ENSCVAG00000019544) tbc1d15 (ENSCVAG00000019613) ENSCVAG00000019629 ENSCVAG00000019639 ENSCVAG00000019642 Mummichog MODERN SPECIES 2241 spire2 (ENSFHEG00000020251) SNTB2 (ENSFHEG00000020234) vps4a (ENSFHEG00000020184) cdk10 (ENSFHEG00000020111) lamb1a (ENSFHEG00000020037) ENSFHEG00000019924 ENSFHEG00000019902 ENSFHEG00000019875 nup160 (ENSFHEG00000019843) frs2b (ENSFHEG00000019727) PTPRB (ENSFHEG00000019688) ENSFHEG00000019616 CHST8 (ENSFHEG00000019601) #20 KCTD15 (ENSFHEG00000019589) ENSFHEG00000019573 lsm14aa (ENSFHEG00000019482) #22 gpia (ENSFHEG00000019417) #25 mphosph6 (ENSFHEG00000019377) SNX20 (ENSFHEG00000019358) ENSFHEG00000019352 tph2 (ENSFHEG00000019344) tbc1d15 (ENSFHEG00000019311) ENSFHEG00000019279 ENSFHEG00000019244 ENSFHEG00000019213 ENSFHEG00000019186 ENSFHEG00000019167 PRDM11 (ENSFHEG00000019163) ENSFHEG00000019138 PHF21A (ENSFHEG00000019123) DGKZ (ENSFHEG00000019036) Ovalentaria_B ANCESTRAL SPECIES 63 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000178960 ENSGT00940000159100.h #20 ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116 ENSGT00940000156088.c.b ENSGT00940000157033.h ENSGT00390000000972 ENSGT00940000167873 ENSGT00940000156003.l.a ENSGT00940000165244.a Pomacentridae ANCESTRAL SPECIES 167 ENSGT00940000156003.l.a ENSGT00940000165244.a ENSGT00940000163149.a.b.c.a.b ENSGT00940000167873 ENSGT00390000001116 ENSGT00940000156088.c.b ENSGT00940000157033.h ENSGT00390000000972 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 Pomacentridae_A ANCESTRAL SPECIES 169 ENSGT00940000156003.l.a ENSGT00940000165244.a ENSGT00940000163149.a.b.c.a.b ENSGT00940000167873 ENSGT00390000001116 ENSGT00940000156088.c.b ENSGT00940000157033.h ENSGT00390000000972 ENSGT00940000156429 ENSGT00950000182885.A.b.c ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT01070000253987 ENSGT00400000022168.b ENSGT00940000165829 ENSGT00940000165415.i.a.c Amphiprion ANCESTRAL SPECIES 240 ENSGT00940000156003.l.a ENSGT00940000165244.a ENSGT00940000163149.a.b.c.a.b.u ENSGT00940000163149.a.b.c.a.b.v ENSGT00940000167873 ENSGT00390000001116 ENSGT00940000156088.c.b ENSGT00940000157033.h ENSGT00390000000972 ENSGT00940000156429 ENSGT00950000182885.A.b.c ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 Clown anemonefish MODERN SPECIES 1708 PTPRB (ENSAOCG00000005134) frs2b (ENSAOCG00000005068) nup160 (ENSAOCG00000005044) tbc1d15 (ENSAOCG00000004984) tph2 (ENSAOCG00000004959) KCTD15 (ENSAOCG00000000199) ENSAOCG00000004919 lsm14aa (ENSAOCG00000004910) #22 gpia (ENSAOCG00000004885) #25 GPATCH2L (ENSAOCG00000004839) ENSAOCG00000004815 tgfb3 (ENSAOCG00000004768) Orange clownfish MODERN SPECIES 18 ENSAPEG00000011182 ENSAPEG00000011566 ENSAPEG00000011598 ENSAPEG00000011614 ENSAPEG00000011627 ENSAPEG00000011658 ENSAPEG00000011681 frs2b (ENSAPEG00000011720) nup160 (ENSAPEG00000011770) tbc1d15 (ENSAPEG00000011900) ENSAPEG00000011947 tph2 (ENSAPEG00000011968) KCTD15 (ENSAPEG00000012041) ENSAPEG00000012072 ENSAPEG00000012100 lsm14aa (ENSAPEG00000012119) #22 gpia (ENSAPEG00000012252) #25 Spiny chromis MODERN SPECIES 1581 ENSAPOG00000003893 lsm14aa (ENSAPOG00000000078) #22 gpia (ENSAPOG00000000074) #25 ENSAPOG00000003201 ENSAPOG00000003189 Bicolor damselfish MODERN SPECIES 1129 CHST8 (ENSSPAG00000023428) #20 kctd15a (ENSSPAG00000023426) ENSSPAG00000023424 lsm14aa (ENSSPAG00000023422) #22 gpia (ENSSPAG00000023420) #25 hsd17b2 (ENSSPAG00000023414) mphosph6 (ENSSPAG00000023413) ENSSPAG00000023411 cotl1 (ENSSPAG00000023410) klhl36 (ENSSPAG00000023409) zgc:56622 (ENSSPAG00000023408) tat (ENSSPAG00000023407) ENSSPAG00000023405 pdf (ENSSPAG00000023403) ENSSPAG00000023402 ENSSPAG00000023400 vps9d1 (ENSSPAG00000023398) znf276 (ENSSPAG00000023396) chmp1a (ENSSPAG00000023395) Cichlidae ANCESTRAL SPECIES 87 ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000178960 ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116 ENSGT00940000156088.c.b ENSGT00940000157033.h ENSGT00390000000972 ENSGT00940000167873 ENSGT00940000156003.l.a ENSGT00940000165244.a Midas cichlid MODERN SPECIES 258 ENSACIG00000016018 CHST8 (ENSACIG00000016002) #20 KCTD15 (ENSACIG00000015988) ENSACIG00000015960 lsm14aa (ENSACIG00000015925) #22 gpia (ENSACIG00000015893) #25 hsd17b2 (ENSACIG00000015859) mphosph6 (ENSACIG00000015842) SNX20 (ENSACIG00000015829) tph2 (ENSACIG00000015794) tbc1d15 (ENSACIG00000015764) ZFC3H1 (ENSACIG00000015672) ENSACIG00000015641 ENSACIG00000015530 frs2b (ENSACIG00000015503) nup160 (ENSACIG00000015433) slc13a1 (ENSACIG00000015361) ces3 (ENSACIG00000015245) ENSACIG00000015232 zfpm1 (ENSACIG00000015211) Pseudocrenilabrinae ANCESTRAL SPECIES 55 ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000178960 ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116 ENSGT00940000156088.c.b ENSGT00940000157033.h ENSGT00390000000972 ENSGT00940000167873 ENSGT00940000156003.l.a ENSGT00940000165244.a Nile tilapia MODERN SPECIES 19 ENSONIG00000010630 #8 ANKRD27 (ENSONIG00000010635) ENSONIG00000010647 ENSONIG00000029844 ENSONIG00000040531 ENSONIG00000010649 ENSONIG00000038407 ENSONIG00000030463 lamb1a (ENSONIG00000017383) ENSONIG00000017391 IRX5 (ENSONIG00000018236) RBL2 (ENSONIG00000018239) KCTD15 (ENSONIG00000018241) CHST8 (ENSONIG00000027541) #20 ENSONIG00000035628 ENSONIG00000027880 #22 ENSONIG00000029449 gpia (ENSONIG00000018246) #25 mphosph6 (ENSONIG00000039940) ENSONIG00000038862 SNX20 (ENSONIG00000036517) tph2 (ENSONIG00000018258) ENSONIG00000042294 ENSONIG00000037639 tbc1d15 (ENSONIG00000018266) ZFC3H1 (ENSONIG00000018271) PTPRB (ENSONIG00000018272) frs2b (ENSONIG00000018278) nup160 (ENSONIG00000018279) ENSONIG00000031707 TMED6 (ENSONIG00000010650) Pseudocrenilabrinae_A ANCESTRAL SPECIES 30 ENSGT00940000177432.a.a ENSGT00990000203615.a.a.a.a ENSGT00730000111696.b ENSGT00940000159837 ENSGT00940000156124.c.b ENSGT00940000156152.e.a.b ENSGT00390000007640.b.b ENSGT00940000160394.b ENSGT00390000016223 ENSGT00940000162591 ENSGT00520000055620.B ENSGT00940000159483.a.a ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000178960 ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116 ENSGT00940000156088.c.b ENSGT00940000157033.h ENSGT00390000000972 ENSGT00940000167873 ENSGT00940000156003.l.a.g ENSGT00940000165244.a Haplochromini ANCESTRAL SPECIES 27 ENSGT00940000177432.a.a ENSGT00990000203615.a.a.a.a ENSGT00730000111696.b ENSGT00940000159837 ENSGT00940000156124.c.b ENSGT00940000156152.e.a.b ENSGT00390000007640.b.b ENSGT00940000160394.b ENSGT00390000016223 ENSGT00940000162591 ENSGT00520000055620.B ENSGT00940000159483.a.a ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000178960 ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116 ENSGT00940000156088.c.b ENSGT00940000157033.h.c ENSGT00390000000972 ENSGT00940000167873 ENSGT00940000156003.l.a.g ENSGT00940000165244.a Haplochromini_A ANCESTRAL SPECIES 25 ENSGT00640000091774.a.b ENSGT00940000177432.a.a ENSGT00990000203615.a.a.a.a ENSGT00730000111696.b ENSGT00940000159837 ENSGT00940000156124.c.b ENSGT00940000156152.e.a.b ENSGT00390000007640.b.b ENSGT00940000160394.b ENSGT00390000016223 ENSGT00940000162591 ENSGT00520000055620.B.k.a ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000178960 ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116 ENSGT00940000156088.c.b ENSGT00940000157033.h.c ENSGT00390000000972 ENSGT00940000167873 ENSGT00940000156003.l.a.g ENSGT00940000165244.a P. nyererei MODERN SPECIES 711 KCTD15 (ENSPNYG00000005690) ENSPNYG00000005709 lsm14aa (ENSPNYG00000005760) #22 gpia (ENSPNYG00000005793) #25 mphosph6 (ENSPNYG00000005875) SNX20 (ENSPNYG00000005901) tph2 (ENSPNYG00000005910) tbc1d15 (ENSPNYG00000005952) ZFC3H1 (ENSPNYG00000005977) PTPRB (ENSPNYG00000006016) frs2b (ENSPNYG00000006086) nup160 (ENSPNYG00000006131) Haplochromini_B ANCESTRAL SPECIES 67 ENSGT00940000177432.a.a ENSGT00990000203615.a.a.a.a ENSGT00730000111696.b ENSGT00940000159837 ENSGT00940000156124.c.b ENSGT00940000156152.e.a.b ENSGT00390000007640.b.b ENSGT00940000160394.b ENSGT00390000016223 ENSGT00940000162591 ENSGT00520000055620.B.k.a ENSGT00950000183202.a.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000178960 ENSGT00950000182885.A.b ENSGT00940000156429 ENSGT00390000001116 ENSGT00940000156088.c.b ENSGT00940000157033.h.c ENSGT00390000000972 ENSGT00940000167873.c.a ENSGT00940000156003.l.a.g ENSGT00940000165244.a Eastern happy MODERN SPECIES 19 DGKZ (ENSACLG00000022285) mdkb (ENSACLG00000022271) ENSACLG00000022189 ENSACLG00000022090 ambra1b (ENSACLG00000022006) NOX5 (ENSACLG00000021924) rpgrip1l (ENSACLG00000021843) ENSACLG00000021798 RBL2 (ENSACLG00000021722) ENSACLG00000021717 CHST8 (ENSACLG00000021706) #20 ENSACLG00000021701 KCTD15 (ENSACLG00000021689) ENSACLG00000021635 ENSACLG00000021601 lsm14aa (ENSACLG00000021578) #22 gpia (ENSACLG00000021501) #25 mphosph6 (ENSACLG00000021473) SNX20 (ENSACLG00000021456) ENSACLG00000021431 tph2 (ENSACLG00000021378) tbc1d15 (ENSACLG00000021334) ZFC3H1 (ENSACLG00000021274) PTPRB (ENSACLG00000021170) frs2b (ENSACLG00000021122) nup160 (ENSACLG00000020947) ENSACLG00000020885 ENSACLG00000020870 ENSACLG00000020844 ENSACLG00000020826 ENSACLG00000020483 Zebra mbuna MODERN SPECIES 37 ENSMZEG00005020522 RBL2 (ENSMZEG00005020520) CHST8 (ENSMZEG00005020518) #20 KCTD15 (ENSMZEG00005020516) ENSMZEG00005020513 lsm14aa (ENSMZEG00005020507) #22 gpia (ENSMZEG00005020493) #25 mphosph6 (ENSMZEG00005020488) SNX20 (ENSMZEG00005020482) tph2 (ENSMZEG00005020475) tbc1d15 (ENSMZEG00005020469) ENSMZEG00005020465 PTPRB (ENSMZEG00005020444) frs2b (ENSMZEG00005020432) nup160 (ENSMZEG00005020421) ENSMZEG00005020418 ENSMZEG00005020400 ENSMZEG00005020392 ENSMZEG00005020384 lamb1a (ENSMZEG00005020370) ENSMZEG00005020359 Burton s mouthbrooder MODERN SPECIES 483 ENSHBUG00000006678 ENSHBUG00000006689 PRDM11 (ENSHBUG00000006714) PHF21A (ENSHBUG00000006727) DGKZ (ENSHBUG00000006799) mdkb (ENSHBUG00000000169) ENSHBUG00000006849 ambra1b (ENSHBUG00000006893) NOX5 (ENSHBUG00000006926) rpgrip1l (ENSHBUG00000006943) ENSHBUG00000007034 ENSHBUG00000007055 CHST8 (ENSHBUG00000007065) #20 KCTD15 (ENSHBUG00000007115) ENSHBUG00000007133 lsm14aa (ENSHBUG00000007150) #22 gpia (ENSHBUG00000007214) #25 mphosph6 (ENSHBUG00000007233) SNX20 (ENSHBUG00000007256) tph2 (ENSHBUG00000007284) tbc1d15 (ENSHBUG00000007299) ENSHBUG00000007320 ENSHBUG00000007331 PTPRB (ENSHBUG00000007375) frs2b (ENSHBUG00000007410) nup160 (ENSHBUG00000000189) Lyretail cichlid MODERN SPECIES 495 ENSNBRG00000005484 ENSNBRG00000005463 ENSNBRG00000005448 PRDM11 (ENSNBRG00000005434) ENSNBRG00000005413 mdkb (ENSNBRG00000005398) ambra1b (ENSNBRG00000005362) NOX5 (ENSNBRG00000005323) ENSNBRG00000005307 IRX5 (ENSNBRG00000005222) ENSNBRG00000005162 ENSNBRG00000005138 CHST8 (ENSNBRG00000005074) #20 KCTD15 (ENSNBRG00000005041) ENSNBRG00000004995 lsm14aa (ENSNBRG00000004982) #22 ENSNBRG00000004958 #25 ENSNBRG00000004936 ENSNBRG00000004918 ENSNBRG00000004891 ENSNBRG00000004883 ITGA11 (ENSNBRG00000004815) ENSNBRG00000004803 CLN6 (ENSNBRG00000004653) CALML4 (ENSNBRG00000004621) Percomorphaceae_C ANCESTRAL SPECIES 5 ENSGT00940000165244.a ENSGT00940000163149.a.b.c.a.b ENSGT00940000167873 ENSGT00940000156003.l.a ENSGT00940000162514 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000178960 ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000163250.A.b ENSGT00940000159483.a.a ENSGT00980000201244 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 Eupercaria ANCESTRAL SPECIES 6 ENSGT00940000165244.a ENSGT00940000156003.l.a ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000163250.A.b ENSGT00940000159483.a.a ENSGT00980000201244 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 Tetraodontidae ANCESTRAL SPECIES 103 ENSGT00940000165244.a ENSGT00940000156003.l.a ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a Fugu MODERN SPECIES 21 ENSTRUG00000009056 psma1 (ENSTRUG00000008890) calc (ENSTRUG00000027271) ENSTRUG00000033095 nup160 (ENSTRUG00000005911) ENSTRUG00000005772 ENSTRUG00000029152 ENSTRUG00000026047 ENSTRUG00000004528 tbc1d15 (ENSTRUG00000003870) ENSTRUG00000031247 tph2 (ENSTRUG00000002970) CHST8 (ENSTRUG00000026043) #20 kctd15a (ENSTRUG00000030982) ENSTRUG00000028944 lsm14aa (ENSTRUG00000004046) #22 gpia (ENSTRUG00000002860) #25 hsd17b2 (ENSTRUG00000030219) mphosph6 (ENSTRUG00000026500) SNX20 (ENSTRUG00000003516) ldhd (ENSTRUG00000033108) znrf1 (ENSTRUG00000002771) gins3 (ENSTRUG00000020212) ndrg4 (ENSTRUG00000027964) ENSTRUG00000031162 ENSTRUG00000029091 ENSTRUG00000026611 ENSTRUG00000000735 smpd3 (ENSTRUG00000000633) ENSTRUG00000021520 septin15 (ENSTRUG00000028986) Eupecaria_A ANCESTRAL SPECIES 7 ENSGT00940000165244.a ENSGT00940000156003.l.a ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000163250.A.b ENSGT00940000159483.a.a ENSGT00980000201244 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 Ballan wrasse MODERN SPECIES 501 ENSLBEG00000013268 IRX5 (ENSLBEG00000013251) ENSLBEG00000013210 FRS2 (ENSLBEG00000013163) PTPRB (ENSLBEG00000012624) ENSLBEG00000012352 tbc1d15 (ENSLBEG00000012281) tph2 (ENSLBEG00000011048) CHST8 (ENSLBEG00000010655) #20 KCTD15 (ENSLBEG00000010626) ENSLBEG00000010591 lsm14aa (ENSLBEG00000010487) #22 gpia (ENSLBEG00000008294) #25 hsd17b2 (ENSLBEG00000007728) mphosph6 (ENSLBEG00000007680) SNX20 (ENSLBEG00000007664) RBL2 (ENSLBEG00000007579) nup160 (ENSLBEG00000007403) Eupecaria_B ANCESTRAL SPECIES 7 ENSGT00940000165244.a ENSGT00940000156003.l.a ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000177974 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000159483.a.a ENSGT00980000201244 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 Eupecaria_C ANCESTRAL SPECIES 6 ENSGT00940000165244.a ENSGT00940000156003.l.a ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000177974 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000159496.l ENSGT00940000159100.h #20 ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00940000159483.a.a ENSGT00980000201244 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b Gilthead seabream MODERN SPECIES 22 ENSSAUG00010021879 nup160 (ENSSAUG00010021898) lamb1a (ENSSAUG00010022264) tph2 (ENSSAUG00010024565) CHST8 (ENSSAUG00010024566) #20 CHST8 (ENSSAUG00010024567) #20 tph2 (ENSSAUG00010024580) tbc1d15 (ENSSAUG00010024918) ENSSAUG00010024986 ENSSAUG00010024987 ENSSAUG00010000388 ENSSAUG00010000403 ENSSAUG00010000442 KCTD15 (ENSSAUG00010000484) ENSSAUG00010000494 lsm14aa (ENSSAUG00010000513) #22 gpia (ENSSAUG00010000582) #25 ENSSAUG00010000662 hsd17b2 (ENSSAUG00010000665) mphosph6 (ENSSAUG00010000670) ENSSAUG00010000672 RBL2 (ENSSAUG00010000686) ENSSAUG00010000701 ENSSAUG00010000705 ENSSAUG00010000706 rpgrip1l (ENSSAUG00010000708) NOX5 (ENSSAUG00010000717) ambra1b (ENSSAUG00010000742) ENSSAUG00010000751 mdkb (ENSSAUG00010000755) DGKZ (ENSSAUG00010000773) Eupercaria_incertae_sedis ANCESTRAL SPECIES 4 ENSGT00940000165244.a ENSGT00940000156003.l.a ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000159496.l ENSGT00940000159100.h #20 ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00940000159483.a.a ENSGT00980000201244 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b European seabass MODERN SPECIES 19 ENSDLAG00005029071 ENSDLAG00005027468 ENSDLAG00005028242 ENSDLAG00005016719 ENSDLAG00005029472 ENSDLAG00005016512 ENSDLAG00005017752 ENSDLAG00005004304 ENSDLAG00005027238 ENSDLAG00005003344 ENSDLAG00005032741 ENSDLAG00005029026 KCTD15 (ENSDLAG00005020257) CHST8 (ENSDLAG00005005479) #20 ENSDLAG00005027638 lsm14aa (ENSDLAG00005026991) #22 gpia (ENSDLAG00005014948) #25 hsd17b2 (ENSDLAG00005014913) ENSDLAG00005031693 ENSDLAG00005014855 ENSDLAG00005014447 ENSDLAG00005030892 ENSDLAG00005029375 ENSDLAG00005003030 rpgrip1l (ENSDLAG00005017101) ENSDLAG00005015137 ENSDLAG00005031649 ambra1b (ENSDLAG00005016487) mdkb (ENSDLAG00005007027) DGKZ (ENSDLAG00005003086) PHF21A (ENSDLAG00005030997) Large yellow croaker MODERN SPECIES 39 ENSLCRG00005001731 PTPRB (ENSLCRG00005001900) frs2b (ENSLCRG00005004048) nup160 (ENSLCRG00005004049) ENSLCRG00005004055 lamb1a (ENSLCRG00005004108) ENSLCRG00005006641 ZFC3H1 (ENSLCRG00005009812) tbc1d15 (ENSLCRG00005009814) tph2 (ENSLCRG00005009883) CHST8 (ENSLCRG00005010820) #20 KCTD15 (ENSLCRG00005010822) ENSLCRG00005010823 lsm14aa (ENSLCRG00005010826) #22 gpia (ENSLCRG00005010834) #25 SNX20 (ENSLCRG00005010921) mphosph6 (ENSLCRG00005010922) hsd17b2 (ENSLCRG00005010924) RBL2 (ENSLCRG00005010934) ENSLCRG00005010961 ENSLCRG00005010971 rpgrip1l (ENSLCRG00005010979) NOX5 (ENSLCRG00005011101) ambra1b (ENSLCRG00005011107) sycp3 (ENSLCRG00005011110) actr6 (ENSLCRG00005011113) ENSLCRG00005011187 ENSLCRG00005011189 ENSLCRG00005011192 Perciformes ANCESTRAL SPECIES 7 ENSGT00940000165244.a ENSGT00940000156003.l.a ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000177974 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000164249.b.a.b.b ENSGT00940000159837 ENSGT00730000111696.b Perciformes_a ANCESTRAL SPECIES 102 ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a Pike perch MODERN SPECIES 293 tbc1d15 (ENSSLUG00000020649) ZFC3H1 (ENSSLUG00000021629) ENSSLUG00000021641 CHST8 (ENSSLUG00000021651) #20 KCTD15 (ENSSLUG00000021668) ENSSLUG00000021671 ENSSLUG00000021685 lsm14aa (ENSSLUG00000021690) #22 gpia (ENSSLUG00000021729) #25 hsd17b2 (ENSSLUG00000021837) ENSSLUG00000021897 ENSSLUG00000021898 ENSSLUG00000021900 mphosph6 (ENSSLUG00000021905) ENSSLUG00000021910 ENSSLUG00000021912 ENSSLUG00000021919 Cottioidei ANCESTRAL SPECIES 37 ENSGT00940000165244.a ENSGT00940000156003.l.a ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a Lumpfish MODERN SPECIES 21 ENSCLMG00005020387 LAMB1 (ENSCLMG00005020415) nup160 (ENSCLMG00005021665) ENSCLMG00005021690 frs2b (ENSCLMG00005021693) ENSCLMG00005021697 ENSCLMG00005021699 ENSCLMG00005021704 tbc1d15 (ENSCLMG00005021714) tph2 (ENSCLMG00005021839) ENSCLMG00005021858 lsm14aa (ENSCLMG00005021862) #22 gpia (ENSCLMG00005021877) #25 mphosph6 (ENSCLMG00005021895) SNX20 (ENSCLMG00005021896) RBL2 (ENSCLMG00005021904) ENSCLMG00005022099 IRX5 (ENSCLMG00005022100) rpgrip1l (ENSCLMG00005022101) ENSCLMG00005022102 NOX5 (ENSCLMG00005000163) ambra1b (ENSCLMG00005000358) ENSCLMG00005000365 mdkb (ENSCLMG00005000367) ENSCLMG00005000368 DGKZ (ENSCLMG00005000500) PHF21A (ENSCLMG00005006087) Stickleback MODERN SPECIES 14 sin3aa (ENSGACG00000007425) PTPN9 (ENSGACG00000007434) snupn (ENSGACG00000007450) snx33 (ENSGACG00000007474) CSPG4 (ENSGACG00000007480) ENSGACG00000007499 lamb1a (ENSGACG00000007525) ENSGACG00000007545 nup160 (ENSGACG00000007560) frs2b (ENSGACG00000007588) PTPRB (ENSGACG00000007601) ZFC3H1 (ENSGACG00000007651) tbc1d15 (ENSGACG00000007682) tph2 (ENSGACG00000007717) ENSGACG00000007729 lsm14aa (ENSGACG00000007738) #22 gpia (ENSGACG00000007744) #25 mphosph6 (ENSGACG00000007779) SNX20 (ENSGACG00000007786) ENSGACG00000007787 IRX5 (ENSGACG00000007829) NOX5 (ENSGACG00000007833) ambra1b (ENSGACG00000007844) ENSGACG00000007854 ENSGACG00000007858 ENSGACG00000007865 ENSGACG00000007866 ENSGACG00000007872 ENSGACG00000007891 PHF21A (ENSGACG00000007895) DGKZ (ENSGACG00000007902) Percomorphaceae_D ANCESTRAL SPECIES 5 ENSGT00940000156003.l.a ENSGT00940000162514 ENSGT00940000165244.a ENSGT00940000163149.a.b.c.a.b ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000178960 ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00940000163250.A.b ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b Anabantaria ANCESTRAL SPECIES 5 ENSGT00940000156003.l.a ENSGT00940000162514 ENSGT00940000165244.a ENSGT00940000163149.a.b.c.a.b ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000178960 ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 Anabantoidei ANCESTRAL SPECIES 5 ENSGT00940000156003.l.a ENSGT00940000165244.a ENSGT00940000163149.a.b.c.a.b ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000178960 ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 Climbing perch MODERN SPECIES 19 ENSATEG00000016096 ENSATEG00000016060 ENSATEG00000016018 ENSATEG00000015985 ENSATEG00000015807 ENSATEG00000015619 ENSATEG00000015577 ENSATEG00000015475 ENSATEG00000015391 ENSATEG00000015322 ENSATEG00000014127 ENSATEG00000027634 CHST8 (ENSATEG00000014050) #20 KCTD15 (ENSATEG00000014037) ENSATEG00000014024 lsm14aa (ENSATEG00000014002) #22 gpia (ENSATEG00000013944) #25 hsd17b2 (ENSATEG00000029385) mphosph6 (ENSATEG00000013914) ENSATEG00000028232 ENSATEG00000013859 ENSATEG00000013794 ENSATEG00000013755 rpgrip1l (ENSATEG00000013724) ENSATEG00000013689 ambra1b (ENSATEG00000013668) ENSATEG00000013658 ENSATEG00000027168 mdkb (ENSATEG00000013643) DGKZ (ENSATEG00000013496) PHF21A (ENSATEG00000013406) Siamese fighting fish MODERN SPECIES 17 lamb1a (ENSBSLG00000008555) ENSBSLG00000007471 nup160 (ENSBSLG00000007344) frs2b (ENSBSLG00000007318) ENSBSLG00000006229 ENSBSLG00000006180 tbc1d15 (ENSBSLG00000006113) tph2 (ENSBSLG00000004721) ENSBSLG00000004704 CHST8 (ENSBSLG00000004703) #20 KCTD15 (ENSBSLG00000004701) ENSBSLG00000004699 lsm14aa (ENSBSLG00000004696) #22 gpia (ENSBSLG00000004693) #25 hsd17b2 (ENSBSLG00000004690) mphosph6 (ENSBSLG00000004687) SNX20 (ENSBSLG00000004685) IRX5 (ENSBSLG00000004615) ENSBSLG00000004613 rpgrip1l (ENSBSLG00000004609) ambra1b (ENSBSLG00000004581) ENSBSLG00000004573 mdkb (ENSBSLG00000004571) DGKZ (ENSBSLG00000004551) PHF21A (ENSBSLG00000004450) PRDM11 (ENSBSLG00000004419) ENSBSLG00000004415 ENSBSLG00000004413 Zig-zag eel MODERN SPECIES 20 ENSMAMG00000022673 ENSMAMG00000026457 ENSMAMG00000024363 ENSMAMG00000028108 ENSMAMG00000021373 ENSMAMG00000024737 ENSMAMG00000021354 ENSMAMG00000021345 ENSMAMG00000021340 ENSMAMG00000021327 ENSMAMG00000021320 ENSMAMG00000021317 ENSMAMG00000016275 KCTD15 (ENSMAMG00000016159) ENSMAMG00000016141 lsm14aa (ENSMAMG00000016088) #22 gpia (ENSMAMG00000015981) #25 hsd17b2 (ENSMAMG00000015920) mphosph6 (ENSMAMG00000015895) ENSMAMG00000015884 ENSMAMG00000015874 ENSMAMG00000027445 ENSMAMG00000015799 ENSMAMG00000015781 rpgrip1l (ENSMAMG00000015755) ENSMAMG00000015722 ambra1b (ENSMAMG00000015652) ENSMAMG00000015636 mdkb (ENSMAMG00000015628) DGKZ (ENSMAMG00000015557) PHF21A (ENSMAMG00000015525) Carangaria ANCESTRAL SPECIES 6 ENSGT00940000165244.a ENSGT00940000163149.a.b.c.a.b ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00940000163250.A.b ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b Pleuronectoidei ANCESTRAL SPECIES 102 ENSGT00940000156003.l.a ENSGT00940000165244.a ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a Turbot MODERN SPECIES 1 ENSSMAG00000000157 ENSSMAG00000000143 ENSSMAG00000000133 ENSSMAG00000000122 ENSSMAG00000019909 ENSSMAG00000019901 ENSSMAG00000038103 ENSSMAG00000019806 ENSSMAG00000019783 ENSSMAG00000019733 ENSSMAG00000019445 CHST8 (ENSSMAG00000019437) #20 KCTD15 (ENSSMAG00000019428) ENSSMAG00000019413 ENSSMAG00000029607 #22 GPI (ENSSMAG00000019390) #25 hsd17b2 (ENSSMAG00000019382) PHF21A (ENSSMAG00000019347) ENSSMAG00000027847 DGKZ (ENSSMAG00000019320) mdkb (ENSSMAG00000019302) ENSSMAG00000032849 ENSSMAG00000032605 ambra1b (ENSSMAG00000019264) ENSSMAG00000019136 ENSSMAG00000019083 ENSSMAG00000036853 ENSSMAG00000019069 ENSSMAG00000036455 ENSSMAG00000025609 Tongue sole MODERN SPECIES 16 ENSCSEG00000021473 ENSCSEG00000021472 lamb1a (ENSCSEG00000021470) zgc:162634 (ENSCSEG00000021469) PIGY (ENSCSEG00000021468) ENSCSEG00000021467 bmal1a (ENSCSEG00000021466) ENSCSEG00000021465 ENSCSEG00000021464 ENSCSEG00000021463 ZFC3H1 (ENSCSEG00000021462) ENSCSEG00000021461 tbc1d15 (ENSCSEG00000021460) tph2 (ENSCSEG00000021459) ENSCSEG00000021458 lsm14aa (ENSCSEG00000021457) #22 gpia (ENSCSEG00000021456) #25 hsd17b2 (ENSCSEG00000021455) mphosph6 (ENSCSEG00000021454) slc12a3 (ENSCSEG00000021453) ENSCSEG00000021452 ENSCSEG00000021451 ENSCSEG00000021450 arpin (ENSCSEG00000021449) anpeplb (ENSCSEG00000021448) cry2 (ENSCSEG00000021440) mapk8ip1a (ENSCSEG00000021439) cstpp1 (ENSCSEG00000021438) ckap5 (ENSCSEG00000021437) ENSCSEG00000021436 alx1 (ENSCSEG00000021381) Carangaria_A ANCESTRAL SPECIES ENSGT00940000165244.a ENSGT00940000163149.a.b.c.a.b ENSGT00940000167873 ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00940000163250.A.b ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b Barramundi perch MODERN SPECIES 8 KCTD15 (ENSLCAG00010026433) ENSLCAG00010026432 ENSLCAG00010026430 #22 gpia (ENSLCAG00010026262) #25 RBL2 (ENSLCAG00010026080) SALL1 (ENSLCAG00010026071) SNX20 (ENSLCAG00010026070) mphosph6 (ENSLCAG00010026067) hsd17b2 (ENSLCAG00010026066) ENSLCAG00010026065 ENSLCAG00010026064 IRX5 (ENSLCAG00010026062) ENSLCAG00010026059 NOX5 (ENSLCAG00010026055) ENSLCAG00010026046 Seriola ANCESTRAL SPECIES 133 ENSGT00390000001116 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000159100.h #20 ENSGT00940000159496.l ENSGT00390000011620.b.e ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00940000163250.A.b ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b Greater amberjack MODERN SPECIES 132 sycp3 (ENSSDUG00000021453) actr6 (ENSSDUG00000021467) ENSSDUG00000021488 ENSSDUG00000000086 ENSSDUG00000000117 ENSSDUG00000000167 ENSSDUG00000000204 ENSSDUG00000000211 PRDM11 (ENSSDUG00000000235) ZFC3H1 (ENSSDUG00000000244) tbc1d15 (ENSSDUG00000000277) tph2 (ENSSDUG00000000350) CHST8 (ENSSDUG00000000397) #20 kctd15a (ENSSDUG00000000401) ENSSDUG00000000429 lsm14aa (ENSSDUG00000000495) #22 gpia (ENSSDUG00000000541) #25 hsd17b2 (ENSSDUG00000000619) mphosph6 (ENSSDUG00000000703) SNX20 (ENSSDUG00000000736) SALL1 (ENSSDUG00000000748) RBL2 (ENSSDUG00000000771) ENSSDUG00000000844 IRX5 (ENSSDUG00000000867) rpgrip1l (ENSSDUG00000000904) NOX5 (ENSSDUG00000000921) ambra1b (ENSSDUG00000000986) ENSSDUG00000001083 mdkb (ENSSDUG00000001096) DGKZ (ENSSDUG00000001108) PHF21A (ENSSDUG00000001173) Yellowtail amberjack MODERN SPECIES 3276 KCTD15 (ENSSLDG00000014606) ENSSLDG00000014574 lsm14aa (ENSSLDG00000014548) #22 gpia (ENSSLDG00000014526) #25 hsd17b2 (ENSSLDG00000014489) mphosph6 (ENSSLDG00000014502) SNX20 (ENSSLDG00000014476) ENSSLDG00000014465 RBL2 (ENSSLDG00000014424) ENSSLDG00000014397 irx5b (ENSSLDG00000014373) Cod DUPLICATION Cod MODERN SPECIES 5 ENSGMOG00000022939 ube2q1 (ENSGMOG00000001027) ENSGMOG00000001042 ENSGMOG00000001050 ENSGMOG00000035153 ENSGMOG00000035633 ENSGMOG00000001093 ENSGMOG00000001105 ENSGMOG00000005486 PEPD (ENSGMOG00000001155) #19 ENSGMOG00000025972 #20 ENSGMOG00000024015 ENSGMOG00000036055 ENSGMOG00000032954 ENSGMOG00000027973 LSM14A (ENSGMOG00000001919) #22 ss18l2 (ENSGMOG00000032480) ENSGMOG00000014545 #23 gpib (ENSGMOG00000014593) #25 wtip (ENSGMOG00000027007) #28 sdr42e1 (ENSGMOG00000020218) ENSGMOG00000027183 ENSGMOG00000014647 CNEP1R1 (ENSGMOG00000030441) heatr3 (ENSGMOG00000006246) tent4b (ENSGMOG00000006223) adcy7 (ENSGMOG00000006186) brd7 (ENSGMOG00000006152) nkd1 (ENSGMOG00000024303) CYLD (ENSGMOG00000006112) sall1a (ENSGMOG00000006103) Cod MODERN SPECIES 22 ENSGMOG00000034862 ENSGMOG00000016333 cnot2 (ENSGMOG00000016382) ENSGMOG00000020359 ENSGMOG00000016402 fnbp4 (ENSGMOG00000016410) agbl2 (ENSGMOG00000016458) tmem17 (ENSGMOG00000016564) ENSGMOG00000016574 ccdc34 (ENSGMOG00000016587) ENSGMOG00000016598 hdhd5 (ENSGMOG00000016609) CHST8 (ENSGMOG00000020446) #20 KCTD15 (ENSGMOG00000005377) ENSGMOG00000005431 lsm14aa (ENSGMOG00000005472) #22 ENSGMOG00000032423 ENSGMOG00000022432 ENSGMOG00000034491 ENSGMOG00000033741 gpia (ENSGMOG00000005500) #25 hsd17b2 (ENSGMOG00000005527) mphosph6 (ENSGMOG00000005632) ENSGMOG00000036529 ENSGMOG00000015373 NTRK3 (ENSGMOG00000018317) ENSGMOG00000030372 ENSGMOG00000009207 KLHL25 (ENSGMOG00000009219) ENSGMOG00000009229 ENSGMOG00000022462 Otomorpha ANCESTRAL SPECIES 485 ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00520000055620.B ENSGT00550000075019 Otophysi ANCESTRAL SPECIES 13 ENSGT00940000155891.d ENSGT00390000005623 ENSGT01050000245471 ENSGT00940000155755.a.a ENSGT00940000167680 ENSGT00940000156257 ENSGT00940000159545 ENSGT00390000007623.d ENSGT00390000015299.a.a.b ENSGT00940000162754 ENSGT00390000017625.l ENSGT00940000158267 ENSGT00940000155870.a.b ENSGT00940000155323.a ENSGT00940000166219 ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00520000055620.B ENSGT00550000075019 ENSGT00940000159483.a.a ENSGT00940000156482.c ENSGT00940000156131.a.a ENSGT00940000156469.a #16 ENSGT00390000009456 #11 ENSGT00740000115898 ENSGT00940000157021 Characiphysae ANCESTRAL SPECIES 6 ENSGT00940000155891.d ENSGT00390000005623 ENSGT00940000155755.a.a ENSGT00940000167680 ENSGT00940000156257 ENSGT00940000159545 ENSGT00390000007623.d ENSGT00390000015299.a.a.b ENSGT00940000162754 ENSGT00390000017625.l ENSGT00940000158267 ENSGT00940000155870.a.b ENSGT00940000155323.a ENSGT00960000192328 ENSGT00940000166219 ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00520000055620.B ENSGT00940000159483.a.a ENSGT00940000156482.c ENSGT00940000156131.a.a ENSGT00550000075019 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b ENSGT00390000000903.a.j Characiphysae_b ANCESTRAL SPECIES 5 ENSGT00940000155891.d ENSGT00390000005623 ENSGT00940000155755.a.a ENSGT00940000167680 ENSGT00940000156257 ENSGT00940000159545 ENSGT00390000007623.d ENSGT00390000015299.a.a.b ENSGT00940000162754 ENSGT00390000017625.l ENSGT00940000158267 ENSGT00940000155870.a.b ENSGT00940000155323.a ENSGT00960000192328 ENSGT00940000166219 ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00520000055620.B ENSGT00940000161299.f ENSGT00940000159483.a.a ENSGT00940000156482.c ENSGT00940000156131.a.a ENSGT00550000075019 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Characoidei ANCESTRAL SPECIES 4 ENSGT00940000155692.i ENSGT00940000155891.d ENSGT00390000005623 ENSGT00940000155755.a.a ENSGT00940000167680 ENSGT00940000156257 ENSGT00940000159545 ENSGT00390000007623.d ENSGT00390000015299.a.a.b ENSGT00940000162754 ENSGT00390000017625.l ENSGT00940000158267 ENSGT00940000155870.a.b ENSGT00940000155323.a ENSGT00940000166219 ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00520000055620.B ENSGT00940000161299.f ENSGT00940000159483.a.b ENSGT00940000159483.a.a ENSGT00940000156482.c ENSGT00940000156131.a.a ENSGT00550000075019 ENSGT00940000158160 ENSGT00390000011239.i Red-bellied piranha MODERN SPECIES 65 lrrk2 (ENSPNAG00000007497) slc2a13b (ENSPNAG00000000226) KIF21A (ENSPNAG00000007477) ENSPNAG00000005479 lsm14aa (ENSPNAG00000000205) #22 gpia (ENSPNAG00000007451) #25 hsd17b2 (ENSPNAG00000000200) mphosph6 (ENSPNAG00000005322) SNX20 (ENSPNAG00000007443) SALL1 (ENSPNAG00000007442) RBL2 (ENSPNAG00000030051) rpgrip1l (ENSPNAG00000030041) ENSPNAG00000030036 irx5b (ENSPNAG00000030034) amfra (ENSPNAG00000030029) ENSPNAG00000030021 DUS2 (ENSPNAG00000030006) PRKAR2B (ENSPNAG00000029987) hbp1 (ENSPNAG00000029977) GPR22 (ENSPNAG00000029970) Mexicana tetra MODERN SPECIES 23 metap2b (ENSAMXG00000031576) ENSAMXG00000041470 pthlhb (ENSAMXG00000038277) tmpob (ENSAMXG00000035536) slc25a3b (ENSAMXG00000043710) ldhbb (ENSAMXG00000034429) golt1bb (ENSAMXG00000017671) slc35b4 (ENSAMXG00000017675) GPR22 (ENSAMXG00000017676) ENSAMXG00000032491 hbp1 (ENSAMXG00000017678) PRKAR2B (ENSAMXG00000017681) DUS2 (ENSAMXG00000017685) ENSAMXG00000017687 amfra (ENSAMXG00000017688) lsm14aa (ENSAMXG00000017690) #22 gpia (ENSAMXG00000017692) #25 hsd17b2 (ENSAMXG00000038489) mphosph6 (ENSAMXG00000033422) SNX20 (ENSAMXG00000017699) SALL1 (ENSAMXG00000017702) RBL2 (ENSAMXG00000017704) rpgrip1l (ENSAMXG00000017705) irx3b (ENSAMXG00000031879) irx5b (ENSAMXG00000029615) ENSAMXG00000017711 KIF21A (ENSAMXG00000017720) slc2a13b (ENSAMXG00000017725) lrrk2 (ENSAMXG00000017727) rsph3 (ENSAMXG00000033650) CLPX (ENSAMXG00000017730) Electric eel MODERN SPECIES 67 fancf (ENSEEEG00000001857) GAS2 (ENSEEEG00000001858) svip (ENSEEEG00000001860) ENSEEEG00000001861 ANO3 (ENSEEEG00000001862) slc5a12 (ENSEEEG00000001873) FIBIN (ENSEEEG00000001884) ENSEEEG00000001885 spi1a (ENSEEEG00000001886) CLPX (ENSEEEG00000001887) lrrk2 (ENSEEEG00000001888) slc2a13b (ENSEEEG00000001890) KIF21A (ENSEEEG00000001919) ENSEEEG00000003949 ENSEEEG00000003952 lsm14aa (ENSEEEG00000003953) #22 gpia (ENSEEEG00000003975) #25 hsd17b2 (ENSEEEG00000004186) mphosph6 (ENSEEEG00000004190) SNX20 (ENSEEEG00000004192) SALL1 (ENSEEEG00000004194) RBL2 (ENSEEEG00000004200) rpgrip1l (ENSEEEG00000004415) irx3b (ENSEEEG00000004419) irx5b (ENSEEEG00000004420) amfra (ENSEEEG00000004421) ENSEEEG00000004424 DUS2 (ENSEEEG00000004427) PRKAR2B (ENSEEEG00000004428) hbp1 (ENSEEEG00000004429) GPR22 (ENSEEEG00000004431) Channel catfish MODERN SPECIES 5 slc17a6 (ENSIPUG00000022336) fancf (ENSIPUG00000022355) GAS2 (ENSIPUG00000022360) svip (ENSIPUG00000022378) ENSIPUG00000022388 ano3 (ENSIPUG00000022398) slc5a12 (ENSIPUG00000022439) ENSIPUG00000022471 spi1a (ENSIPUG00000022488) CLPX (ENSIPUG00000022495) lrrk2 (ENSIPUG00000022546) slc2a13b (ENSIPUG00000022609) KIF21A (ENSIPUG00000022632) ENSIPUG00000022805 ENSIPUG00000022806 lsm14aa (ENSIPUG00000022820) #22 GPI (ENSIPUG00000022840) #25 Hsd17b2 (ENSIPUG00000022910) Mphosph6 (ENSIPUG00000022920) snx20 (ENSIPUG00000022925) SALL1 (ENSIPUG00000022928) rbl2 (ENSIPUG00000022935) RPGRIP1L (ENSIPUG00000022966) irx3b (ENSIPUG00000022990) ENSIPUG00000022997 irx5b (ENSIPUG00000022999) AMFR (ENSIPUG00000023007) ENSIPUG00000023023 DUS2 (ENSIPUG00000023029) PRKAR2B (ENSIPUG00000023034) hbp1 (ENSIPUG00000023044) Cyprinoidei ANCESTRAL SPECIES 88 ENSGT00940000155891.d ENSGT00390000005623 ENSGT01050000245471 ENSGT00940000155755.a.a ENSGT00940000167680 ENSGT00940000156257 ENSGT00940000159545 ENSGT00390000007623.d ENSGT00390000015299.a.a.b ENSGT00940000162754 ENSGT00390000017625.l ENSGT00940000158267 ENSGT00940000155870.a.b ENSGT00940000155323.a ENSGT00940000166219.c ENSGT00940000154415.lb.b #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00520000055620.B ENSGT00940000159483.a.a ENSGT00940000156482.c ENSGT00940000156131.a.a ENSGT00550000075019 ENSGT00940000156469.a #16 ENSGT00390000009456 #11 ENSGT00740000115898 ENSGT00940000157021 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 466 ENSGT00940000155692.i.d ENSGT00940000155891.d.a ENSGT00940000155755.a.a.b ENSGT00940000167680.d ENSGT00940000156257.a.a ENSGT00940000159545 ENSGT00390000007623.d ENSGT00390000015299.a.a.b.b ENSGT00940000162754.f ENSGT00390000017625.l.c ENSGT00940000158267.a ENSGT00940000155870.a.b ENSGT00940000155323.a.a ENSGT00940000166219.c.b ENSGT01100000263547.a.b.a.a ENSGT00940000154415.lb.b.i #22 ENSGT00390000000707.y.a.f #25 ENSGT00390000009212.a ENSGT00530000063759.a.h ENSGT00940000155938.b.b.c ENSGT00950000183202.a.b.j ENSGT00520000055620.B Cyprininae_a ANCESTRAL SPECIES 333 ENSGT00940000155692.i.d ENSGT00940000155891.d.a ENSGT00940000155755.a.a.a ENSGT00940000167680.c ENSGT00940000156257.a.a ENSGT00940000159545.d ENSGT00390000007623.d ENSGT00390000015299.a.a.b.b ENSGT00940000162754.f ENSGT00390000017625.l.c ENSGT00940000158267.a ENSGT00940000155870.a.b ENSGT00940000155323.a.a ENSGT00940000166219.c.b ENSGT01100000263547.a.b.a.a ENSGT00940000154415.lb.b.i #22 ENSGT00390000000707.y.a.f #25 ENSGT00940000160204.c ENSGT00390000009212.a ENSGT00530000063759.a.h ENSGT00530000063759.a.g.a ENSGT00940000155938.b.b.c ENSGT00950000183202.a.b.j ENSGT00520000055620.B ENSGT00940000161299.f.h.a ENSGT00940000156482.c.d ENSGT00940000156131.a.a.c ENSGT00550000075019.h ENSGT00940000156469.a.f.b #16 Common carp reference MODERN SPECIES 33 ANO5 (ENSCCRG00000029928) slc17a6a (ENSCCRG00000029643) GAS2 (ENSCCRG00000003283) svip (ENSCCRG00000059764) ANO3 (ENSCCRG00000024086) slc5a12 (ENSCCRG00000024569) ENSCCRG00000019642 spi1a (ENSCCRG00000081854) ENSCCRG00000061049 lrrk2 (ENSCCRG00000023910) slc2a13b (ENSCCRG00000023254) KIF21A (ENSCCRG00000007026) ENSCCRG00000065800 ENSCCRG00000079053 ENSCCRG00000060464 lsm14aa (ENSCCRG00000064424) #22 gpia (ENSCCRG00000078904) #25 hsd17b2 (ENSCCRG00000006879) ENSCCRG00000006874 ENSCCRG00000038771 ENSCCRG00000043922 rpgrip1l (ENSCCRG00000039247) ENSCCRG00000046068 ENSCCRG00000057053 irx5b (ENSCCRG00000059883) amfra (ENSCCRG00000008162) ENSCCRG00000058134 ENSCCRG00000001119 ENSCCRG00000002557 #16 faap24 (ENSCCRG00000041712) #11 bmb (ENSCCRG00000041716) Golden-line barbel MODERN SPECIES 542 ANO5 (ENSSGRG00000033938) slc17a6a (ENSSGRG00000034632) fancf (ENSSGRG00000034637) ENSSGRG00000034638 ENSSGRG00000034639 ANO3 (ENSSGRG00000034643) FIBIN (ENSSGRG00000034833) ENSSGRG00000034835 spi1a (ENSSGRG00000034836) CLPX (ENSSGRG00000034851) lrrk2 (ENSSGRG00000035244) slc2a13b (ENSSGRG00000035245) KIF21A (ENSSGRG00000035325) ENSSGRG00000037235 ENSSGRG00000037248 lsm14aa (ENSSGRG00000037249) #22 gpia (ENSSGRG00000037253) #25 hsd17b2 (ENSSGRG00000037629) mphosph6 (ENSSGRG00000037681) SNX20 (ENSSGRG00000037682) SALL1 (ENSSGRG00000037689) RBL2 (ENSSGRG00000037705) rpgrip1l (ENSSGRG00000037964) irx3b (ENSSGRG00000037967) ENSSGRG00000037969 amfra (ENSSGRG00000037972) ENSSGRG00000038200 DUS2 (ENSSGRG00000038207) SLC7A10 (ENSSGRG00000038213) #16 ENSSGRG00000038214 #16 faap24 (ENSSGRG00000038215) #11 Goldfish MODERN SPECIES 45 ANO3 (ENSCARG00000069008) ENSCARG00000069161 FIBIN (ENSCARG00000069180) ENSCARG00000069182 ENSCARG00000069186 ENSCARG00000069190 spi1a (ENSCARG00000069198) CLPX (ENSCARG00000069221) lrrk2 (ENSCARG00000069416) slc2a13b (ENSCARG00000069594) KIF21A (ENSCARG00000069661) ENSCARG00000069919 ENSCARG00000069951 ENSCARG00000069991 ENSCARG00000069993 lsm14aa (ENSCARG00000069997) #22 gpia (ENSCARG00000070016) #25 hsd17b2 (ENSCARG00000070063) mphosph6 (ENSCARG00000070071) ENSCARG00000070073 SALL1 (ENSCARG00000070076) RBL2 (ENSCARG00000070118) rpgrip1l (ENSCARG00000070171) irx3b (ENSCARG00000070184) ENSCARG00000070186 NCAM2 (ENSCARG00000040923) ENSCARG00000041387 ENSCARG00000041425 ENSCARG00000041438 ENSCARG00000041450 ENSCARG00000041473 Cyprininae ANCESTRAL SPECIES 430 ENSGT00940000155323.a.b.b ENSGT00940000166219.c.a ENSGT00940000154415.lb.b.j #22 ENSGT00390000000707.y.a.e #25 ENSGT00940000160204 ENSGT00390000009212.b ENSGT00530000063759.a.g.b ENSGT00940000155938.b.b.d ENSGT00950000183202.a.b.i ENSGT00940000161299.f.h ENSGT00950000183003.a.b.d ENSGT00940000159483.a.a ENSGT00940000156482.c ENSGT00940000156131.a.a.d ENSGT00550000075019 ENSGT00940000156469.a.f.a #16 ENSGT00390000009456.q #11 ENSGT00740000115898.f Goldfish MODERN SPECIES 17 irf7 (ENSCARG00000013957) ENSCARG00000013974 hic1l (ENSCARG00000013980) ENSCARG00000013983 ENSCARG00000013999 ENSCARG00000014005 ENSCARG00000014014 ENSCARG00000014023 ENSCARG00000014041 ENSCARG00000014136 ENSCARG00000014139 ENSCARG00000014149 ENSCARG00000014152 ENSCARG00000014156 ENSCARG00000014160 lsm14aa (ENSCARG00000014164) #22 gpia (ENSCARG00000014200) #25 hsd17b2 (ENSCARG00000014711) mphosph6 (ENSCARG00000014811) SNX20 (ENSCARG00000014845) SALL1 (ENSCARG00000014859) ENSCARG00000014871 ENSCARG00000014877 irx3b (ENSCARG00000014892) ENSCARG00000014897 irx5b (ENSCARG00000014913) amfra (ENSCARG00000014918) ENSCARG00000003898 SLC7A10 (ENSCARG00000003943) #16 faap24 (ENSCARG00000004024) #11 bmb (ENSCARG00000004059) Cyprininae_a ANCESTRAL SPECIES 474 ENSGT00940000155323.a.b.b ENSGT00940000166219.c.a ENSGT00940000154415.lb.b.j #22 ENSGT00390000000707.y.a.e #25 ENSGT00940000160204.d ENSGT00390000009212.b ENSGT00530000063759.a.g.b ENSGT00940000155938.b.b.d ENSGT00950000183202.a.b.i ENSGT00940000161299.f.h.b ENSGT00950000183003.a.b.d ENSGT00940000159483.a.a ENSGT00940000156482.c.c ENSGT00940000156131.a.a.d ENSGT00550000075019.g ENSGT00940000156469.a.f.a #16 ENSGT00390000009456.q #11 Common carp reference MODERN SPECIES 37 ENSCCRG00000077396 ENSCCRG00000033108 ANO5 (ENSCCRG00000075447) slc17a6a (ENSCCRG00000001345) GAS2 (ENSCCRG00000079326) svip (ENSCCRG00000073693) ANO3 (ENSCCRG00000001456) slc5a12 (ENSCCRG00000001602) FIBIN (ENSCCRG00000064565) ENSCCRG00000023629 spi1a (ENSCCRG00000067414) ENSCCRG00000023607 lrrk2 (ENSCCRG00000023338) ENSCCRG00000011168 ENSCCRG00000054426 lsm14aa (ENSCCRG00000082556) #22 gpia (ENSCCRG00000006923) #25 hsd17b2 (ENSCCRG00000006911) mphosph6 (ENSCCRG00000072592) ENSCCRG00000076372 ENSCCRG00000045509 ENSCCRG00000038831 ENSCCRG00000078261 ENSCCRG00000076778 irx5b (ENSCCRG00000079305) amfra (ENSCCRG00000004770) ENSCCRG00000056073 ENSCCRG00000005460 #16 ENSCCRG00000001949 ENSCCRG00000073823 ENSCCRG00000054770 Golden-line barbel MODERN SPECIES 1400 ENSSGRG00000001432 ENSSGRG00000001446 lsm14aa (ENSSGRG00000001453) #22 gpia (ENSSGRG00000001674) #25 ENSSGRG00000009243 mphosph6 (ENSSGRG00000009244) SALL1 (ENSSGRG00000009245) RBL2 (ENSSGRG00000009247) Zebrafish MODERN SPECIES 17 ANO5 (ENSDARG00000015731) slc17a6a (ENSDARG00000001127) fancf (ENSDARG00000019250) GAS2 (ENSDARG00000001259) svip (ENSDARG00000097236) ANO3 (ENSDARG00000058015) slc5a12 (ENSDARG00000005004) FIBIN (ENSDARG00000039949) ENSDARG00000039951 spi1a (ENSDARG00000067797) CLPX (ENSDARG00000067796) lrrk2 (ENSDARG00000006169) slc2a13b (ENSDARG00000076899) KIF21A (ENSDARG00000061131) ENSDARG00000025189 lsm14aa (ENSDARG00000006600) #22 gpia (ENSDARG00000012987) #25 hsd17b2 (ENSDARG00000045553) mphosph6 (ENSDARG00000093007) SNX20 (ENSDARG00000045554) SALL1 (ENSDARG00000075891) RBL2 (ENSDARG00000045636) rpgrip1l (ENSDARG00000051754) irx5b (ENSDARG00000074070) amfra (ENSDARG00000020218) ENSDARG00000051729 DUS2 (ENSDARG00000077607) SLC7A10 (ENSDARG00000051730) #16 ENSDARG00000116673 faap24 (ENSDARG00000051731) #11 bmb (ENSDARG00000096603) Clupeocephala ANCESTRAL SPECIES 444 ENSGT00940000154415.mb #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00520000055620.B Euteleosteomorpha ANCESTRAL SPECIES 119 ENSGT00940000158293 ENSGT00940000154856.A.a.c.a.b.a.a ENSGT00940000161051.a.a.b.b.b.b ENSGT00390000000972 ENSGT00940000157033.h ENSGT00940000156088.c.b ENSGT00940000168658 ENSGT00390000011055 ENSGT00940000158153.a ENSGT00940000160214 ENSGT00390000001116 ENSGT00940000177974 ENSGT00940000156429 ENSGT00950000182885.A.b ENSGT00940000154318.A.b ENSGT00940000154415.mb #22 ENSGT00390000000707.y.a #25 ENSGT00940000160204 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00520000055620.B Acanthomorphata ANCESTRAL SPECIES ENSGT00940000154415.mb #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000154415.mb #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000154415.mb #22 Tiger tail seahorse MODERN SPECIES 223 ENSHCOG00000008865 fam174b (ENSHCOG00000008871) st8sia2 (ENSHCOG00000008890) ENSHCOG00000008905 ENSHCOG00000008919 ambra1b (ENSHCOG00000008935) NOX5 (ENSHCOG00000008971) rpgrip1l (ENSHCOG00000009004) tph2 (ENSHCOG00000009042) tbc1d15 (ENSHCOG00000009059) ENSHCOG00000009144 ENSHCOG00000009159 frs2b (ENSHCOG00000009170) nup160 (ENSHCOG00000009178) ENSHCOG00000009212 ENSHCOG00000009227 #22 gpia (ENSHCOG00000009272) #25 mphosph6 (ENSHCOG00000009296) ENSHCOG00000009317 ENSHCOG00000009323 ENSHCOG00000009334 ENSHCOG00000009353 ENSHCOG00000009365 actr6 (ENSHCOG00000009404) sycp3 (ENSHCOG00000009429) si:ch211-59o9.10 (ENSHCOG00000009443) nedd1 (ENSHCOG00000009501) PCLAF (ENSHCOG00000009517) FCSK (ENSHCOG00000009528) commd9 (ENSHCOG00000000294) zgc:114188 (ENSHCOG00000009549) Otomorpha ANCESTRAL SPECIES ENSGT00940000154415.mb #22 Clupeiformes ANCESTRAL SPECIES 34 ENSGT00940000156052.k.b ENSGT00390000016435 ENSGT00940000157431.c.a ENSGT00940000157431.c.b ENSGT00950000182938.b.b.b.b.a ENSGT00390000001195.b ENSGT00940000157689 ENSGT00940000154969.a ENSGT00940000158389 ENSGT00940000159103 ENSGT00940000157011 ENSGT00940000156594 ENSGT00940000153657.B #19 ENSGT00940000159100.g #20 ENSGT00940000159496.k ENSGT00940000154415.mb #22 ENSGT00390000011620.b.e.g ENSGT00940000154415.lb.a #22 ENSGT00940000160407 ENSGT00390000003210 #23 ENSGT00940000158970 ENSGT00390000014065 ENSGT00390000017480 ENSGT00940000161832.a ENSGT00940000154856.A.a.c.a.a ENSGT00390000000020.b ENSGT01020000230346.E Denticle herring MODERN SPECIES 7 CSK (ENSDCDG00000033706) CPLX3 (ENSDCDG00000033703) ENSDCDG00000033687 CSK (ENSDCDG00000033680) CPLX3 (ENSDCDG00000033677) ENSDCDG00000033676 ulk3 (ENSDCDG00000033673) ENSDCDG00000032543 tm2d3 (ENSDCDG00000032435) larp6a (ENSDCDG00000032433) ENSDCDG00000032401 THSD4 (ENSDCDG00000032392) pepd (ENSDCDG00000032377) #19 CHST8 (ENSDCDG00000032373) #20 KCTD15 (ENSDCDG00000032370) ENSDCDG00000032367 #22 ss18l2 (ENSDCDG00000032364) GARRE1 (ENSDCDG00000032361) #23 celf1 (ENSDCDG00000032062) ptpmt1 (ENSDCDG00000032041) ndufs3 (ENSDCDG00000032037) c1qtnf4 (ENSDCDG00000032036) c6ast1 (ENSDCDG00000031619) c6ast1 (ENSDCDG00000031572) mtch2 (ENSDCDG00000031539) psmc3 (ENSDCDG00000031530) MYO5A (ENSDCDG00000029826) gnb5b (ENSDCDG00000029104) bcl2l10 (ENSDCDG00000029090) mapk6 (ENSDCDG00000029087) ENSDCDG00000029085 Elephant shark MODERN SPECIES 1682 ENSCMIG00000000651 ENSCMIG00000015598 kiaa0513 (ENSCMIG00000015592) rhpn2 (ENSCMIG00000015576) #12 GPATCH1 (ENSCMIG00000015568) #13 ENSCMIG00000015563 #14 lrp3 (ENSCMIG00000015554) #15 slc7a10a (ENSCMIG00000015546) #16 ENSCMIG00000015543 cebpa (ENSCMIG00000015540) cebpg (ENSCMIG00000015538) pepd (ENSCMIG00000015515) #19 ENSCMIG00000015513 #20 kctd15a (ENSCMIG00000015511) ENSCMIG00000015507 lsm14ab (ENSCMIG00000015505) #22 ENSCMIG00000015503 GARRE1 (ENSCMIG00000015458) #23 gpib (ENSCMIG00000015390) #25 wtip (ENSCMIG00000015359) #28 ENSCMIG00000015357 ccdc22 (ENSCMIG00000015333) apex2 (ENSCMIG00000015314) uba2 (ENSCMIG00000015283) #27 pdcd2l (ENSCMIG00000015268) #26 ENSCMIG00000015265 ENSCMIG00000015263 ENSCMIG00000015261 ciao2b (ENSCMIG00000015257) rrad (ENSCMIG00000015253) ENSCMIG00000015248