Sarcopterygii	ANCESTRAL SPECIES	45										ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000235556	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000155177.a ##23	ENSGT00940000155177.b #23	ENSGT00940000162718 #25	ENSGT00940000164746	ENSGT00940000154334 #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Tetrapoda	ANCESTRAL SPECIES	175									ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000164480	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000234540.E	ENSGT00940000162718 #25	ENSGT00940000155177.b #23	ENSGT00940000155177.a ##23	ENSGT00940000158367 #24	ENSGT01020000230623
Amniota	ANCESTRAL SPECIES	54							ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000235556	ENSGT00940000155177.b #23	ENSGT00940000155177.a ##23	ENSGT00940000161722	ENSGT00940000158367 #24	ENSGT01030000234540.E	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00940000161118	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556
Mammalia	ANCESTRAL SPECIES	69	ENSGT00520000055635.c.a	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000164746	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Theria	ANCESTRAL SPECIES	3	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT00960000186961	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Eutheria	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT01100000263543.a	ENSGT00940000159013 #34
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT01100000263543.a	ENSGT00940000159013 #34
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Glires	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Rodentia	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Rodentia_B	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Muroidea	ANCESTRAL SPECIES	6	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000165376	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000164746	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Prairie vole	MODERN SPECIES	8	Ampd1 (ENSMOCG00000010785) #7	Nras (ENSMOCG00000022441) #8	Csde1 (ENSMOCG00000018960) #9	ENSMOCG00000009367 #10	Sike1 (ENSMOCG00000000516) #11	Nr1h5 (ENSMOCG00000012316) #12	Sycp1 (ENSMOCG00000009622) #13	Tshb (ENSMOCG00000006126) #14	Tspan2 (ENSMOCG00000003591) #15	Ngf (ENSMOCG00000021179) #16	Vangl1 (ENSMOCG00000018281) #17	Casq2 (ENSMOCG00000014851) #18	Nhlh2 (ENSMOCG00000007572) #19	ENSMOCG00000020465 #20	Mab21l3 (ENSMOCG00000016617) #21	Atp1a1 (ENSMOCG00000006963) #22	Igsf3 (ENSMOCG00000005813) #23	Ptgfrn (ENSMOCG00000020768) #24	Ttf2 (ENSMOCG00000008415) #25	Trim45 (ENSMOCG00000000422) #26	Vtcn1 (ENSMOCG00000000748) #27	Man1a2 (ENSMOCG00000020901) #28	Tent5c (ENSMOCG00000018840) #29	Gdap2 (ENSMOCG00000011700) #30	Wdr3 (ENSMOCG00000014361) #31	Spag17 (ENSMOCG00000001590) #32	ENSMOCG00000009935 #33	Tbx15 (ENSMOCG00000012596) #34	Wars2 (ENSMOCG00000005144) #35	ENSMOCG00000020989 #36	ENSMOCG00000020634 #37
Northern American deer mouse	MODERN SPECIES	19	Dennd2c (ENSPEMG00000002658)	Ampd1 (ENSPEMG00000017567) #7	Nras (ENSPEMG00000029639) #8	Csde1 (ENSPEMG00000020357) #9	Sike1 (ENSPEMG00000020550) #11	Nr1h5 (ENSPEMG00000021165) #12	Sycp1 (ENSPEMG00000023338) #13	Tshb (ENSPEMG00000024182) #14	Tspan2 (ENSPEMG00000023387) #15	Ngf (ENSPEMG00000001587) #16	Vangl1 (ENSPEMG00000026640) #17	Casq2 (ENSPEMG00000012959) #18	Nhlh2 (ENSPEMG00000025983) #19	Slc22a15 (ENSPEMG00000023603) #20	Mab21l3 (ENSPEMG00000023035) #21	Atp1a1 (ENSPEMG00000010999) #22	Igsf3 (ENSPEMG00000011916) #23	Cd2 (ENSPEMG00000018550)	Ptgfrn (ENSPEMG00000009682) #24	Cd101 (ENSPEMG00000008402)	ENSPEMG00000010330	ENSPEMG00000010451	Trim45 (ENSPEMG00000007787) #26	ENSPEMG00000027103 #27	Man1a2 (ENSPEMG00000007670) #28	ENSPEMG00000031182 #29	Gdap2 (ENSPEMG00000020913) #30	Wdr3 (ENSPEMG00000011928) #31	Spag17 (ENSPEMG00000012291) #32	Tbx15 (ENSPEMG00000026645) #34	ENSPEMG00000018152 #35
Cricetinae	ANCESTRAL SPECIES	12	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000165376	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Chinese hamster chok1gshd	MODERN SPECIES	66	Nras (ENSCGRG00001020093) #8	ENSCGRG00001016833 #9	ENSCGRG00001011859	Sike1 (ENSCGRG00001023509) #11	Nr1h5 (ENSCGRG00001022882) #12	Sycp1 (ENSCGRG00001010102) #13	ENSCGRG00001006375	Tshb (ENSCGRG00001012202) #14	Tspan2 (ENSCGRG00001014655) #15	Ngf (ENSCGRG00001000250) #16	Vangl1 (ENSCGRG00001022127) #17	Casq2 (ENSCGRG00001013746) #18	Nhlh2 (ENSCGRG00001009328) #19	Slc22a15 (ENSCGRG00001018525) #20	Mab21l3 (ENSCGRG00001018373) #21	Atp1a1 (ENSCGRG00001024330) #22	Igsf3 (ENSCGRG00001017829) #23	Cd2 (ENSCGRG00001019348)	Ptgfrn (ENSCGRG00001022148) #24	Cd101 (ENSCGRG00001024359)	ENSCGRG00001006277	Trim45 (ENSCGRG00001000157) #26	Vtcn1 (ENSCGRG00001015357) #27	Man1a2 (ENSCGRG00001020266) #28	Tent5c (ENSCGRG00001005586) #29	Gdap2 (ENSCGRG00001012369) #30	Wdr3 (ENSCGRG00001019544) #31	Spag17 (ENSCGRG00001013560) #32	Tbx15 (ENSCGRG00001024224) #34	Wars2 (ENSCGRG00001018718) #35	Hao2 (ENSCGRG00001020203)
Golden Hamster	MODERN SPECIES	681	Ampd1 (ENSMAUG00000001096) #7	Nras (ENSMAUG00000019927) #8	Csde1 (ENSMAUG00000014031) #9	Sike1 (ENSMAUG00000012482) #11	Nr1h5 (ENSMAUG00000010803) #12	Sycp1 (ENSMAUG00000000328) #13	Tshb (ENSMAUG00000005156) #14	Tspan2 (ENSMAUG00000004539) #15	ENSMAUG00000002276 #16	Vangl1 (ENSMAUG00000009480) #17	Casq2 (ENSMAUG00000000284) #18	Nhlh2 (ENSMAUG00000016936) #19	Slc22a15 (ENSMAUG00000010758) #20	Mab21l3 (ENSMAUG00000009568) #21	ENSMAUG00000008452	Atp1a1 (ENSMAUG00000017136) #22	ENSMAUG00000017849	Igsf3 (ENSMAUG00000013987) #23	Cd2 (ENSMAUG00000012774)	Ptgfrn (ENSMAUG00000002851) #24	Cd101 (ENSMAUG00000017674)	ENSMAUG00000016725	Trim45 (ENSMAUG00000013623) #26	Vtcn1 (ENSMAUG00000015061) #27	Man1a2 (ENSMAUG00000000417) #28	Tent5c (ENSMAUG00000017728) #29	ENSMAUG00000017297	Gdap2 (ENSMAUG00000014132) #30	Wdr3 (ENSMAUG00000002574) #31	Spag17 (ENSMAUG00000008022) #32
Murinae	ANCESTRAL SPECIES	5	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Mus	ANCESTRAL SPECIES	7	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Mus_A	ANCESTRAL SPECIES	9	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Mus_B	ANCESTRAL SPECIES	8	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Mouse	MODERN SPECIES	12	Dennd2c (ENSMUSG00000007379)	Ampd1 (ENSMUSG00000070385) #7	Nras (ENSMUSG00000027852) #8	Csde1 (ENSMUSG00000068823) #9	Sike1 (ENSMUSG00000027854) #11	Nr1h5 (ENSMUSG00000048938) #12	Sycp1 (ENSMUSG00000027855) #13	Tshb (ENSMUSG00000027857) #14	Tspan2 (ENSMUSG00000027858) #15	Ngf (ENSMUSG00000027859) #16	Vangl1 (ENSMUSG00000027860) #17	Casq2 (ENSMUSG00000027861) #18	Nhlh2 (ENSMUSG00000048540) #19	Slc22a15 (ENSMUSG00000033147) #20	Mab21l3 (ENSMUSG00000044313) #21	Atp1a1 (ENSMUSG00000033161) #22	Igsf3 (ENSMUSG00000042035) #23	Cd2 (ENSMUSG00000027863)	Ptgfrn (ENSMUSG00000027864) #24	Cd101 (ENSMUSG00000086564)	Ttf2 (ENSMUSG00000033222) #25	Trim45 (ENSMUSG00000033233) #26	Vtcn1 (ENSMUSG00000051076) #27	Man1a2 (ENSMUSG00000008763) #28	Tent5c (ENSMUSG00000044468) #29	Gdap2 (ENSMUSG00000027865) #30	Wdr3 (ENSMUSG00000033285) #31	Spag17 (ENSMUSG00000027867) #32	Tbx15 (ENSMUSG00000027868) #34	Wars2 (ENSMUSG00000004233) #35	Hao2 (ENSMUSG00000027870)
Mus_C	ANCESTRAL SPECIES	6	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
spretus	MODERN SPECIES	12	Dennd2c (MGP_SPRETEiJ_G0026397)	Ampd1 (MGP_SPRETEiJ_G0026396) #7	Nras (MGP_SPRETEiJ_G0026395) #8	Csde1 (MGP_SPRETEiJ_G0026394) #9	Sike1 (MGP_SPRETEiJ_G0026393) #11	Nr1h5 (MGP_SPRETEiJ_G0026392) #12	Sycp1 (MGP_SPRETEiJ_G0026391) #13	Tshb (MGP_SPRETEiJ_G0026390) #14	Tspan2 (MGP_SPRETEiJ_G0026389) #15	Ngf (MGP_SPRETEiJ_G0026388) #16	Vangl1 (MGP_SPRETEiJ_G0026387) #17	Casq2 (MGP_SPRETEiJ_G0026386) #18	Nhlh2 (MGP_SPRETEiJ_G0026385) #19	Slc22a15 (MGP_SPRETEiJ_G0026384) #20	Mab21l3 (MGP_SPRETEiJ_G0026383) #21	Atp1a1 (MGP_SPRETEiJ_G0026382) #22	Igsf3 (MGP_SPRETEiJ_G0026381) #23	Cd2 (MGP_SPRETEiJ_G0026380)	Ptgfrn (MGP_SPRETEiJ_G0026379) #24	Cd101 (MGP_SPRETEiJ_G0026378)	Ttf2 (MGP_SPRETEiJ_G0026377) #25	Trim45 (MGP_SPRETEiJ_G0026376) #26	Vtcn1 (MGP_SPRETEiJ_G0026375) #27	Man1a2 (MGP_SPRETEiJ_G0026374) #28	Tent5c (MGP_SPRETEiJ_G0026373) #29	Gdap2 (MGP_SPRETEiJ_G0026372) #30	Wdr3 (MGP_SPRETEiJ_G0026371) #31	Spag17 (MGP_SPRETEiJ_G0026370) #32	Tbx15 (MGP_SPRETEiJ_G0026369) #34	Wars2 (MGP_SPRETEiJ_G0026368) #35	Hao2 (MGP_SPRETEiJ_G0026367)
Steppe mouse	MODERN SPECIES	3036										Casq2 (ENSMSIG00000017951) #18	ENSMSIG00000017944	Nhlh2 (ENSMSIG00000017937) #19	Slc22a15 (ENSMSIG00000017867) #20	Mab21l3 (ENSMSIG00000017843) #21	ENSMSIG00000017831	Atp1a1 (ENSMSIG00000017781) #22	Igsf3 (ENSMSIG00000017718) #23	Cd2 (ENSMSIG00000017692)	Ptgfrn (ENSMSIG00000017639) #24	Cd101 (ENSMSIG00000017562)	Ttf2 (ENSMSIG00000017516) #25	ENSMSIG00000017406 #26	Vtcn1 (ENSMSIG00000017388) #27	Man1a2 (ENSMSIG00000017361) #28	Tent5c (ENSMSIG00000017352) #29
Ryukyu mouse	MODERN SPECIES	12	Dennd2c (MGP_CAROLIEiJ_G0025447)	Ampd1 (MGP_CAROLIEiJ_G0025446) #7	Nras (MGP_CAROLIEiJ_G0025445) #8	Csde1 (MGP_CAROLIEiJ_G0025444) #9	Sike1 (MGP_CAROLIEiJ_G0025443) #11	Nr1h5 (MGP_CAROLIEiJ_G0025442) #12	MGP_CAROLIEiJ_G0025441 ##13	Tshb (MGP_CAROLIEiJ_G0025440) #14	Tspan2 (MGP_CAROLIEiJ_G0025439) #15	Ngf (MGP_CAROLIEiJ_G0025438) #16	Vangl1 (MGP_CAROLIEiJ_G0025437) #17	Casq2 (MGP_CAROLIEiJ_G0025436) #18	Nhlh2 (MGP_CAROLIEiJ_G0025435) #19	Slc22a15 (MGP_CAROLIEiJ_G0025434) #20	Mab21l3 (MGP_CAROLIEiJ_G0025433) #21	Atp1a1 (MGP_CAROLIEiJ_G0025432) #22	Igsf3 (MGP_CAROLIEiJ_G0025431) #23	Cd2 (MGP_CAROLIEiJ_G0025430)	Ptgfrn (MGP_CAROLIEiJ_G0025429) #24	Cd101 (MGP_CAROLIEiJ_G0025428)	Ttf2 (MGP_CAROLIEiJ_G0025427) #25	MGP_CAROLIEiJ_G0025426 #26	Vtcn1 (MGP_CAROLIEiJ_G0025425) #27	Man1a2 (MGP_CAROLIEiJ_G0025424) #28	Tent5c (MGP_CAROLIEiJ_G0025423) #29	Gdap2 (MGP_CAROLIEiJ_G0025422) #30	Wdr3 (MGP_CAROLIEiJ_G0025421) #31	Spag17 (MGP_CAROLIEiJ_G0025420) #32	Tbx15 (MGP_CAROLIEiJ_G0025419) #34	MGP_CAROLIEiJ_G0025418	Hao2 (MGP_CAROLIEiJ_G0025417)
Shrew mouse	MODERN SPECIES	17	Dennd2c (MGP_PahariEiJ_G0026891)	Ampd1 (MGP_PahariEiJ_G0026890) #7	Nras (MGP_PahariEiJ_G0026889) #8	Csde1 (MGP_PahariEiJ_G0026888) #9	Sike1 (MGP_PahariEiJ_G0026887) #11	Nr1h5 (MGP_PahariEiJ_G0026886) #12	Sycp1 (MGP_PahariEiJ_G0026885) #13	Tshb (MGP_PahariEiJ_G0026884) #14	Tspan2 (MGP_PahariEiJ_G0026883) #15	Ngf (MGP_PahariEiJ_G0026882) #16	Vangl1 (MGP_PahariEiJ_G0026881) #17	Casq2 (MGP_PahariEiJ_G0026880) #18	Nhlh2 (MGP_PahariEiJ_G0026879) #19	Slc22a15 (MGP_PahariEiJ_G0026878) #20	Mab21l3 (MGP_PahariEiJ_G0026877) #21	Atp1a1 (MGP_PahariEiJ_G0026876) #22	Igsf3 (MGP_PahariEiJ_G0026875) #23	Cd2 (MGP_PahariEiJ_G0026874)	Ptgfrn (MGP_PahariEiJ_G0026873) #24	Cd101 (MGP_PahariEiJ_G0026872)	Ttf2 (MGP_PahariEiJ_G0026871) #25	MGP_PahariEiJ_G0026870 #26	Vtcn1 (MGP_PahariEiJ_G0026869) #27	Man1a2 (MGP_PahariEiJ_G0026868) #28	Tent5c (MGP_PahariEiJ_G0026867) #29	Gdap2 (MGP_PahariEiJ_G0026866) #30	Wdr3 (MGP_PahariEiJ_G0026865) #31	Spag17 (MGP_PahariEiJ_G0026864) #32	Tbx15 (MGP_PahariEiJ_G0026863) #34	Wars2 (MGP_PahariEiJ_G0026862) #35	Hao2 (MGP_PahariEiJ_G0026861)
Rat	MODERN SPECIES	11	Dennd2c (ENSRNOG00000018716)	Ampd1 (ENSRNOG00000018656) #7	Nras (ENSRNOG00000023079) #8	Csde1 (ENSRNOG00000061058) #9	Sike1 (ENSRNOG00000017502) #11	Nr1h5 (ENSRNOG00000023073) #12	Sycp1 (ENSRNOG00000016835) #13	Tshb (ENSRNOG00000016793) #14	Tspan2 (ENSRNOG00000023338) #15	Ngf (ENSRNOG00000016571) #16	Vangl1 (ENSRNOG00000016477) #17	Casq2 (ENSRNOG00000016243) #18	Nhlh2 (ENSRNOG00000054375) #19	Slc22a15 (ENSRNOG00000033051) #20	Mab21l3 (ENSRNOG00000016044) #21	Atp1a1 (ENSRNOG00000030019) #22	Igsf3 (ENSRNOG00000023851) #23	Cd2 (ENSRNOG00000015821)	ENSRNOG00000069649	Ptgfrn (ENSRNOG00000015655) #24	Cd101 (ENSRNOG00000037190)	Ttf2 (ENSRNOG00000057761) #25	Trim45 (ENSRNOG00000015347) #26	Vtcn1 (ENSRNOG00000015279) #27	ENSRNOG00000067753	Man1a2 (ENSRNOG00000015226) #28	Tent5c (ENSRNOG00000070242) #29	Gdap2 (ENSRNOG00000019754) #30	Wdr3 (ENSRNOG00000019670) #31	Spag17 (ENSRNOG00000037196) #32	Tbx15 (ENSRNOG00000019565) #34
Upper Galilee mountains blind mole rat	MODERN SPECIES	868	Dennd2c (ENSNGAG00000023499)	Ampd1 (ENSNGAG00000023553) #7	Nras (ENSNGAG00000007289) #8	ENSNGAG00000021929 #9	Sike1 (ENSNGAG00000016770) #11	Nr1h5 (ENSNGAG00000010800) #12	Sycp1 (ENSNGAG00000012549) #13	Tshb (ENSNGAG00000001574) #14	Tspan2 (ENSNGAG00000014905) #15	Ngf (ENSNGAG00000018398) #16	Vangl1 (ENSNGAG00000021078) #17	Casq2 (ENSNGAG00000012360) #18	Nhlh2 (ENSNGAG00000022644) #19	ENSNGAG00000017546 #20	Mab21l3 (ENSNGAG00000013724) #21	Atp1a1 (ENSNGAG00000022692) #22	Igsf3 (ENSNGAG00000024078) #23	Cd2 (ENSNGAG00000015298)
Lesser Egyptian jerboa	MODERN SPECIES	144	Ampd1 (ENSJJAG00000021675) #7	ENSJJAG00000020941 #8	Csde1 (ENSJJAG00000019571) #9	ENSJJAG00000019089 #11	Nr1h5 (ENSJJAG00000018578) #12	ENSJJAG00000018067 #13	Tshb (ENSJJAG00000001329) #14	Tspan2 (ENSJJAG00000000832) #15	Ngf (ENSJJAG00000022901) #16	ENSJJAG00000021722	Vangl1 (ENSJJAG00000021462) #17	Casq2 (ENSJJAG00000020862) #18	Nhlh2 (ENSJJAG00000019983) #19	Slc22a15 (ENSJJAG00000000255) #20	Mab21l3 (ENSJJAG00000022482) #21	Atp1a1 (ENSJJAG00000020791) #22	Igsf3 (ENSJJAG00000017489) #23	Cd2 (ENSJJAG00000019842)	Ptgfrn (ENSJJAG00000019616) #24	Ttf2 (ENSJJAG00000015225) #25	Trim45 (ENSJJAG00000007227) #26	Vtcn1 (ENSJJAG00000019207) #27	ENSJJAG00000018170	Man1a2 (ENSJJAG00000017865) #28	Tent5c (ENSJJAG00000013174) #29	ENSJJAG00000017333	ENSJJAG00000014767	ENSJJAG00000013768	ENSJJAG00000013505 #30	Wdr3 (ENSJJAG00000013861) #31	Spag17 (ENSJJAG00000008428) #32
Kangaroo rat	MODERN SPECIES	397	Bcas2 (ENSDORG00000014220)	Dennd2c (ENSDORG00000014222)	Ampd1 (ENSDORG00000005377) #7	Nras (ENSDORG00000025267) #8	Csde1 (ENSDORG00000011609) #9	Sike1 (ENSDORG00000005162) #11	ENSDORG00000027896 #13	Tshb (ENSDORG00000003238) #14	Tspan2 (ENSDORG00000003239) #15	Ngf (ENSDORG00000025001) #16	Vangl1 (ENSDORG00000013118) #17	Casq2 (ENSDORG00000013122) #18	ENSDORG00000010026 #20	ENSDORG00000028402 #20	Mab21l3 (ENSDORG00000010259) #21	Atp1a1 (ENSDORG00000028959) #22	Igsf3 (ENSDORG00000010085) #23	Ptgfrn (ENSDORG00000013777) #24	Cd101 (ENSDORG00000013779)	Ttf2 (ENSDORG00000013781) #25	Vtcn1 (ENSDORG00000013786) #27	Man1a2 (ENSDORG00000025695) #28	Tent5c (ENSDORG00000010159) #29	Gdap2 (ENSDORG00000001079) #30	Wdr3 (ENSDORG00000011031) #31	Spag17 (ENSDORG00000011032) #32	ENSDORG00000023254	Tbx15 (ENSDORG00000005620) #34	Wars2 (ENSDORG00000008562) #35	Hao2 (ENSDORG00000003236)	ENSDORG00000007977 #36
Rodentia_A	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Sciuridae	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Marmotini	ANCESTRAL SPECIES	62	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Marmotini_b	ANCESTRAL SPECIES	74	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Squirrel	MODERN SPECIES	227		AMPD1 (ENSSTOG00000015082) #7	NRAS (ENSSTOG00000023151) #8	ENSSTOG00000032722 #9	SIKE1 (ENSSTOG00000001684) #11	ENSSTOG00000027072 #12	ENSSTOG00000010304 #13	TSHB (ENSSTOG00000022113) #14	TSPAN2 (ENSSTOG00000020353) #15	NGF (ENSSTOG00000005518) #16	VANGL1 (ENSSTOG00000015734) #17	CASQ2 (ENSSTOG00000015738) #18	NHLH2 (ENSSTOG00000019698) #19	SLC22A15 (ENSSTOG00000016141) #20	MAB21L3 (ENSSTOG00000026516) #21	ATP1A1 (ENSSTOG00000016127) #22	IGSF3 (ENSSTOG00000022906) #23	CD2 (ENSSTOG00000004188)	PTGFRN (ENSSTOG00000010916) #24	CD101 (ENSSTOG00000010919)	TTF2 (ENSSTOG00000010927) #25	ENSSTOG00000034928	TRIM45 (ENSSTOG00000007369) #26	VTCN1 (ENSSTOG00000007389) #27	MAN1A2 (ENSSTOG00000016016) #28	TENT5C (ENSSTOG00000010392) #29	GDAP2 (ENSSTOG00000024699) #30	WDR3 (ENSSTOG00000003504) #31	SPAG17 (ENSSTOG00000003532) #32	TBX15 (ENSSTOG00000013040) #34	WARS2 (ENSSTOG00000013051) #35
Arctic ground squirrel	MODERN SPECIES	134	DENND2C (ENSUPAG00010022334)	AMPD1 (ENSUPAG00010022337) #7	NRAS (ENSUPAG00010022339) #8	CSDE1 (ENSUPAG00010022340) #9	SIKE1 (ENSUPAG00010022488) #11	ENSUPAG00010022495 #12	SYCP1 (ENSUPAG00010022501) #13	TSHB (ENSUPAG00010022509) #14	TSPAN2 (ENSUPAG00010022515) #15	NGF (ENSUPAG00010022522) #16	VANGL1 (ENSUPAG00010022525) #17	CASQ2 (ENSUPAG00010022531) #18	NHLH2 (ENSUPAG00010022533) #19	SLC22A15 (ENSUPAG00010022536) #20	MAB21L3 (ENSUPAG00010022542) #21	ATP1A1 (ENSUPAG00010022544) #22
Alpin marmot	MODERN SPECIES	79	NRAS (ENSMMMG00000014434) #8	CSDE1 (ENSMMMG00000014448) #9	SIKE1 (ENSMMMG00000014866) #11	ENSMMMG00000014870	ENSMMMG00000014879 #12	SYCP1 (ENSMMMG00000014892) #13	ENSMMMG00000014952	TSHB (ENSMMMG00000014957) #14	TSPAN2 (ENSMMMG00000014968) #15	NGF (ENSMMMG00000014973) #16	VANGL1 (ENSMMMG00000014977) #17	CASQ2 (ENSMMMG00000014991) #18	NHLH2 (ENSMMMG00000015011) #19	SLC22A15 (ENSMMMG00000015020) #20	MAB21L3 (ENSMMMG00000015051) #21	ATP1A1 (ENSMMMG00000015066) #22	IGSF3 (ENSMMMG00000015107) #23	CD2 (ENSMMMG00000015127)	PTGFRN (ENSMMMG00000015141) #24	CD101 (ENSMMMG00000015154)	TTF2 (ENSMMMG00000015196) #25	ENSMMMG00000015205	TRIM45 (ENSMMMG00000015213) #26	VTCN1 (ENSMMMG00000015255) #27	MAN1A2 (ENSMMMG00000015283) #28	TENT5C (ENSMMMG00000015304) #29	GDAP2 (ENSMMMG00000015308) #30	WDR3 (ENSMMMG00000015336) #31	ENSMMMG00000015354 #32	TBX15 (ENSMMMG00000015373) #34	WARS2 (ENSMMMG00000015379) #35
Eurasian red squirrel	MODERN SPECIES		AMPD1 (ENSSVLG00005000465) #7	ENSSVLG00005000492 #8	CSDE1 (ENSSVLG00005000559) #9	SIKE1 (ENSSVLG00005000707) #11	ENSSVLG00005000743 #12	SYCP1 (ENSSVLG00005000819) #13	TSHB (ENSSVLG00005000935) #14	TSPAN2 (ENSSVLG00005000967) #15	NGF (ENSSVLG00005001008) #16	ENSSVLG00005001021	VANGL1 (ENSSVLG00005001032) #17	CASQ2 (ENSSVLG00005001056) #18	NHLH2 (ENSSVLG00005001085) #19	SLC22A15 (ENSSVLG00005001098) #20	MAB21L3 (ENSSVLG00005001135) #21	ATP1A1 (ENSSVLG00005001182) #22	ENSSVLG00005001215	IGSF3 (ENSSVLG00005001236) #23	CD2 (ENSSVLG00005001265)	PTGFRN (ENSSVLG00005001283) #24	CD101 (ENSSVLG00005001302)	ENSSVLG00005001327 #25	ENSSVLG00005001350 #25	TRIM45 (ENSSVLG00005001388) #26	VTCN1 (ENSSVLG00005001433) #27	MAN1A2 (ENSSVLG00005001469) #28	TENT5C (ENSSVLG00005001495) #29	GDAP2 (ENSSVLG00005001518) #30	ENSSVLG00005001561	WDR3 (ENSSVLG00005001572) #31	ENSSVLG00005001591 #32
Hystricomorpha	ANCESTRAL SPECIES	23	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A.i #35	ENSGT00390000018717.b.a.b
Naked mole-rat female	MODERN SPECIES	10	CSDE1 (ENSHGLG00000009620) #9	SIKE1 (ENSHGLG00000015408) #11	ENSHGLG00000032648	ENSHGLG00000004974 #12	ENSHGLG00000047308	ENSHGLG00000006103 #13	TSHB (ENSHGLG00000014600) #14	TSPAN2 (ENSHGLG00000010786) #15	NGF (ENSHGLG00000044577) #16	ENSHGLG00000032979	VANGL1 (ENSHGLG00000016399) #17	CASQ2 (ENSHGLG00000038257) #18	NHLH2 (ENSHGLG00000046588) #19	SLC22A15 (ENSHGLG00000011061) #20	MAB21L3 (ENSHGLG00000009205) #21	ATP1A1 (ENSHGLG00000009304) #22	IGSF3 (ENSHGLG00000018539) #23	CD2 (ENSHGLG00000014947)	PTGFRN (ENSHGLG00000019106) #24	CD101 (ENSHGLG00000018298)	TTF2 (ENSHGLG00000012459) #25	TRIM45 (ENSHGLG00000017735) #26	VTCN1 (ENSHGLG00000018792) #27	ENSHGLG00000045985	MAN1A2 (ENSHGLG00000017646) #28	FAM46C (ENSHGLG00000043157) #29	ENSHGLG00000041120	ENSHGLG00000017537 #30	WDR3 (ENSHGLG00000017936) #31	SPAG17 (ENSHGLG00000009162) #32	ENSHGLG00000032534
Hystricomorpha_a	ANCESTRAL SPECIES	14	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000164746	ENSGT00940000167338	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A.i #35
Guinea pig	MODERN SPECIES	2	DENND2C (ENSCPOG00000012944)	AMPD1 (ENSCPOG00000002591) #7	NRAS (ENSCPOG00000021833) #8	CSDE1 (ENSCPOG00000040388) #9	SIKE1 (ENSCPOG00000007406) #11	ENSCPOG00000009115	SYCP1 (ENSCPOG00000012690) #13	TSHB (ENSCPOG00000030694) #14	TSPAN2 (ENSCPOG00000008376) #15	NGF (ENSCPOG00000024033) #16	VANGL1 (ENSCPOG00000001701) #17	CASQ2 (ENSCPOG00000001703) #18	NHLH2 (ENSCPOG00000026593) #19	SLC22A15 (ENSCPOG00000009506) #20	MAB21L3 (ENSCPOG00000009511) #21	ATP1A1 (ENSCPOG00000000927) #22	IGSF3 (ENSCPOG00000002029) #23	CD2 (ENSCPOG00000036418)	PTGFRN (ENSCPOG00000015740) #24	CD101 (ENSCPOG00000015741)	ENSCPOG00000000605	VTCN1 (ENSCPOG00000034001) #27	MAN1A2 (ENSCPOG00000004935) #28	TENT5C (ENSCPOG00000035573) #29	GDAP2 (ENSCPOG00000012599) #30	WDR3 (ENSCPOG00000011305) #31	SPAG17 (ENSCPOG00000011317) #32	TBX15 (ENSCPOG00000000615) #34	WARS2 (ENSCPOG00000000616) #35	ENSCPOG00000001451 #36	ENSCPOG00000033437 #36
Hystricomorpha_b	ANCESTRAL SPECIES	6	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.d #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000167338	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A.i #35	ENSGT00390000018717.b.a.b
Long-tailed chinchilla	MODERN SPECIES	142	AMPD1 (ENSCLAG00000006645) #7	NRAS (ENSCLAG00000005888) #8	CSDE1 (ENSCLAG00000006618) #9	SIKE1 (ENSCLAG00000005344) #11	ENSCLAG00000006997	ENSCLAG00000013132 #12	ENSCLAG00000004900 ##13	TSHB (ENSCLAG00000011105) #14	TSPAN2 (ENSCLAG00000007865) #15	NGF (ENSCLAG00000004815) #16	VANGL1 (ENSCLAG00000006270) #17	CASQ2 (ENSCLAG00000007972) #18	NHLH2 (ENSCLAG00000005691) #19	SLC22A15 (ENSCLAG00000006619) #20	MAB21L3 (ENSCLAG00000004428) #21	ATP1A1 (ENSCLAG00000005733) #22	IGSF3 (ENSCLAG00000006923) #23	CD2 (ENSCLAG00000007838)	PTGFRN (ENSCLAG00000008229) #24	CD101 (ENSCLAG00000010019)	ENSCLAG00000014230	TRIM45 (ENSCLAG00000010898) #26	VTCN1 (ENSCLAG00000014982) #27	MAN1A2 (ENSCLAG00000008573) #28	TENT5C (ENSCLAG00000006985) #29	ENSCLAG00000007247	GDAP2 (ENSCLAG00000008843) #30	WDR3 (ENSCLAG00000010657) #31	SPAG17 (ENSCLAG00000006388) #32	TBX15 (ENSCLAG00000008292) #34	WARS2 (ENSCLAG00000004926) #35
Degu	MODERN SPECIES	181	ENSODEG00000007383 #9	SIKE1 (ENSODEG00000007343) #11	ENSODEG00000010107 #12	SYCP1 (ENSODEG00000006927) #13	TSHB (ENSODEG00000009005) #14	TSPAN2 (ENSODEG00000007319) #15	NGF (ENSODEG00000006538) #16	ENSODEG00000006379	ENSODEG00000008957	ENSODEG00000008559	VANGL1 (ENSODEG00000010599) #17	CASQ2 (ENSODEG00000009014) #18	NHLH2 (ENSODEG00000008157) #19	SLC22A15 (ENSODEG00000007565) #20	MAB21L3 (ENSODEG00000005924) #21	ATP1A1 (ENSODEG00000006810) #22	ENSODEG00000006132	IGSF3 (ENSODEG00000007439) #23	ENSODEG00000006855	PTGFRN (ENSODEG00000006807) #24	CD101 (ENSODEG00000006286)	ENSODEG00000006362	TRIM45 (ENSODEG00000007020) #26	VTCN1 (ENSODEG00000006757) #27	MAN1A2 (ENSODEG00000005674) #28	TENT5C (ENSODEG00000006187) #29	ENSODEG00000005813
Lagomorpha	ANCESTRAL SPECIES	1	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368.c.b ##13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Rabbit	MODERN SPECIES	4	DENND2C (ENSOCUG00000016789)	AMPD1 (ENSOCUG00000016424) #7	NRAS (ENSOCUG00000022455) #8	CSDE1 (ENSOCUG00000016438) #9	SIKE1 (ENSOCUG00000016457) #11	ENSOCUG00000023188 #12	ENSOCUG00000022499	ENSOCUG00000016463 ##13	Tshb (ENSOCUG00000023876) #14	TSPAN2 (ENSOCUG00000001279) #15	NGF (ENSOCUG00000000659) #16	VANGL1 (ENSOCUG00000016240) #17	CASQ2 (ENSOCUG00000010594) #18	SLC22A15 (ENSOCUG00000015370) #20	MAB21L3 (ENSOCUG00000015382) #21	ATP1A1 (ENSOCUG00000001324) #22	IGSF3 (ENSOCUG00000005284) #23	CD2 (ENSOCUG00000008474)	PTGFRN (ENSOCUG00000000608) #24	CD101 (ENSOCUG00000000612)	TTF2 (ENSOCUG00000000613) #25	TRIM45 (ENSOCUG00000000237) #26	VTCN1 (ENSOCUG00000026343) #27	MAN1A2 (ENSOCUG00000012648) #28	ENSOCUG00000026654	ENSOCUG00000027717	GDAP2 (ENSOCUG00000007568) #30	WDR3 (ENSOCUG00000007572) #31	SPAG17 (ENSOCUG00000007586) #32	TBX15 (ENSOCUG00000012320) #34	WARS2 (ENSOCUG00000012330) #35
Pika	MODERN SPECIES	2757																ENSOPRG00000006712 #22	ENSOPRG00000006746	ENSOPRG00000006754 #23	ENSOPRG00000006760	ENSOPRG00000006767
Tree shrew	MODERN SPECIES	3085																ATP1A1 (ENSTBEG00000010568) #22
Primates	ANCESTRAL SPECIES	4	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT01100000263543.a	ENSGT00940000159013 #34
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT01100000263543.a	ENSGT00940000159013 #34
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000153362.b.g	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000153362.b.g	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000000080.a.a.j	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000153362.b.g	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Hominidae	ANCESTRAL SPECIES	3	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000000080.a.a.j	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000153362.b.g	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000000080.a.a.j	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000153362.b.g	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000000080.a.a.j	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000153362.b.g	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Pan	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000000080.a.a.j	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000153362.b.g	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Chimpanzee	MODERN SPECIES		DENND2C (ENSPTRG00000001137)	AMPD1 (ENSPTRG00000001139) #7	NRAS (ENSPTRG00000001140) #8	CSDE1 (ENSPTRG00000033721) #9	SIKE1 (ENSPTRG00000001142) #11	SYCP1 (ENSPTRG00000001143) #13	TSHB (ENSPTRG00000001144) #14	TSPAN2 (ENSPTRG00000001145) #15	ENSPTRG00000050090 #16	ENSPTRG00000042869	VANGL1 (ENSPTRG00000001147) #17	CASQ2 (ENSPTRG00000001148) #18	NHLH2 (ENSPTRG00000044281) #19	SLC22A15 (ENSPTRG00000001150) #20	MAB21L3 (ENSPTRG00000001151) #21	ATP1A1 (ENSPTRG00000001152) #22	ENSPTRG00000050070	CD58 (ENSPTRG00000001153)	IGSF3 (ENSPTRG00000001154) #23	CD2 (ENSPTRG00000001157)	PTGFRN (ENSPTRG00000001158) #24	CD101 (ENSPTRG00000001160)	TTF2 (ENSPTRG00000001162) #25	TRIM45 (ENSPTRG00000001163) #26	VTCN1 (ENSPTRG00000001164) #27	MAN1A2 (ENSPTRG00000024134) #28	TENT5C (ENSPTRG00000049021) #29	GDAP2 (ENSPTRG00000001167) #30	WDR3 (ENSPTRG00000001168) #31	SPAG17 (ENSPTRG00000001170) #32	TBX15 (ENSPTRG00000001172) #34
Bonobo	MODERN SPECIES		DENND2C (ENSPPAG00000033748)	AMPD1 (ENSPPAG00000036239) #7	NRAS (ENSPPAG00000037915) #8	CSDE1 (ENSPPAG00000025861) #9	SIKE1 (ENSPPAG00000030969) #11	SYCP1 (ENSPPAG00000031200) #13	TSHB (ENSPPAG00000031428) #14	TSPAN2 (ENSPPAG00000028377) #15	ENSPPAG00000039894 #16	ENSPPAG00000040918	VANGL1 (ENSPPAG00000037996) #17	CASQ2 (ENSPPAG00000028248) #18	NHLH2 (ENSPPAG00000022478) #19	SLC22A15 (ENSPPAG00000033451) #20	MAB21L3 (ENSPPAG00000037392) #21	ATP1A1 (ENSPPAG00000039938) #22	CD58 (ENSPPAG00000036763)	CD2 (ENSPPAG00000030761)	PTGFRN (ENSPPAG00000043179) #24	CD101 (ENSPPAG00000032745)	TTF2 (ENSPPAG00000027542) #25	TRIM45 (ENSPPAG00000027104) #26	VTCN1 (ENSPPAG00000023467) #27	MAN1A2 (ENSPPAG00000028925) #28	TENT5C (ENSPPAG00000023449) #29	GDAP2 (ENSPPAG00000028536) #30	WDR3 (ENSPPAG00000029068) #31	ENSPPAG00000033918 #32	TBX15 (ENSPPAG00000035967) #34	ENSPPAG00000027227	WARS2 (ENSPPAG00000032746) #35
Human	MODERN SPECIES		BCAS2 (ENSG00000116752)	DENND2C (ENSG00000175984)	AMPD1 (ENSG00000116748) #7	NRAS (ENSG00000213281) #8	CSDE1 (ENSG00000009307) #9	SIKE1 (ENSG00000052723) #11	SYCP1 (ENSG00000198765) #13	TSHB (ENSG00000134200) #14	TSPAN2 (ENSG00000134198) #15	NGF (ENSG00000134259) #16	VANGL1 (ENSG00000173218) #17	CASQ2 (ENSG00000118729) #18	NHLH2 (ENSG00000177551) #19	SLC22A15 (ENSG00000163393) #20	MAB21L3 (ENSG00000173212) #21	ATP1A1 (ENSG00000163399) #22	CD58 (ENSG00000116815)	IGSF3 (ENSG00000143061) #23	CD2 (ENSG00000116824)	PTGFRN (ENSG00000134247) #24	CD101 (ENSG00000134256)	TTF2 (ENSG00000116830) #25	TRIM45 (ENSG00000134253) #26	VTCN1 (ENSG00000134258) #27	MAN1A2 (ENSG00000198162) #28	TENT5C (ENSG00000183508) #29	GDAP2 (ENSG00000196505) #30	WDR3 (ENSG00000065183) #31	SPAG17 (ENSG00000155761) #32	TBX15 (ENSG00000092607) #34	WARS2 (ENSG00000116874) #35
Gorilla	MODERN SPECIES		DENND2C (ENSGGOG00000008502)	AMPD1 (ENSGGOG00000013805) #7	NRAS (ENSGGOG00000043922) #8	CSDE1 (ENSGGOG00000002164) #9	SIKE1 (ENSGGOG00000015643) #11	SYCP1 (ENSGGOG00000015556) #13	TSHB (ENSGGOG00000010389) #14	TSPAN2 (ENSGGOG00000010083) #15	ENSGGOG00000040025 #16	ENSGGOG00000037681	ENSGGOG00000026844 #17	CASQ2 (ENSGGOG00000017029) #18	NHLH2 (ENSGGOG00000043451) #19	SLC22A15 (ENSGGOG00000014585) #20	MAB21L3 (ENSGGOG00000002308) #21	ATP1A1 (ENSGGOG00000006738) #22	CD58 (ENSGGOG00000012864)	ENSGGOG00000027658	ENSGGOG00000022319 #23	CD2 (ENSGGOG00000005260)	PTGFRN (ENSGGOG00000011825) #24	CD101 (ENSGGOG00000008209)	TTF2 (ENSGGOG00000015790) #25	TRIM45 (ENSGGOG00000014996) #26	VTCN1 (ENSGGOG00000025814) #27	MAN1A2 (ENSGGOG00000014278) #28	TENT5C (ENSGGOG00000038013) #29	ENSGGOG00000006897 #30	WDR3 (ENSGGOG00000009982) #31	SPAG17 (ENSGGOG00000012975) #32	ENSGGOG00000043257
Orangutan	MODERN SPECIES		BCAS2 (ENSPPYG00000001000)	DENND2C (ENSPPYG00000000999)	AMPD1 (ENSPPYG00000000998) #7	NRAS (ENSPPYG00000000997) #8	CSDE1 (ENSPPYG00000000996) #9	SIKE1 (ENSPPYG00000037081) #11	SYCP1 (ENSPPYG00000000994) #13	ENSPPYG00000000993 #14	TSPAN2 (ENSPPYG00000000992) #15	NGF (ENSPPYG00000000991) #16	VANGL1 (ENSPPYG00000000990) #17	CASQ2 (ENSPPYG00000000989) #18	NHLH2 (ENSPPYG00000000988) #19	SLC22A15 (ENSPPYG00000000987) #20	MAB21L3 (ENSPPYG00000000986) #21	ATP1A1 (ENSPPYG00000000985) #22	ENSPPYG00000000983	CD58 (ENSPPYG00000000982)	IGSF3 (ENSPPYG00000000981) #23	CD2 (ENSPPYG00000000979)	PTGFRN (ENSPPYG00000000978) #24	CD101 (ENSPPYG00000000977)	TTF2 (ENSPPYG00000000976) #25	TRIM45 (ENSPPYG00000000975) #26	VTCN1 (ENSPPYG00000000974) #27	ENSPPYG00000031903	MAN1A2 (ENSPPYG00000000973) #28	TENT5C (ENSPPYG00000000972) #29	GDAP2 (ENSPPYG00000000971) #30	WDR3 (ENSPPYG00000000970) #31	SPAG17 (ENSPPYG00000000969) #32
Gibbon	MODERN SPECIES	2	DENND2C (ENSNLEG00000004759)	AMPD1 (ENSNLEG00000004786) #7	NRAS (ENSNLEG00000034325) #8	CSDE1 (ENSNLEG00000004842) #9	SIKE1 (ENSNLEG00000004921) #11	SYCP1 (ENSNLEG00000004923) #13	TSHB (ENSNLEG00000004959) #14	TSPAN2 (ENSNLEG00000004961) #15	ENSNLEG00000035282 #16	ENSNLEG00000030925	VANGL1 (ENSNLEG00000004984) #17	CASQ2 (ENSNLEG00000004999) #18	NHLH2 (ENSNLEG00000027793) #19	SLC22A15 (ENSNLEG00000005012) #20	MAB21L3 (ENSNLEG00000005038) #21	ATP1A1 (ENSNLEG00000005047) #22	CD58 (ENSNLEG00000032597)	IGSF3 (ENSNLEG00000005162) #23	CD2 (ENSNLEG00000005167)	PTGFRN (ENSNLEG00000005178) #24	CD101 (ENSNLEG00000005188)	TTF2 (ENSNLEG00000005209) #25	TRIM45 (ENSNLEG00000005248) #26	VTCN1 (ENSNLEG00000005256) #27	MAN1A2 (ENSNLEG00000005272) #28	TENT5C (ENSNLEG00000035910) #29	GDAP2 (ENSNLEG00000005283) #30	WDR3 (ENSNLEG00000005304) #31	SPAG17 (ENSNLEG00000033248) #32	TBX15 (ENSNLEG00000005347) #34	WARS2 (ENSNLEG00000005349) #35
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000153362.b.g	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300.c #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000153362.b.g	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300.c #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000153362.b.g	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300.c #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Macaca	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000153362.b.g	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300.c #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Macaca_a	ANCESTRAL SPECIES		ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT01100000263539.b.b.b.b.b.a.b.a.a.b.b.a.a	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.b.a.b	ENSGT00940000154840.b #22	ENSGT00940000153362.b.g	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300.c #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Rhesus	MODERN SPECIES		AMPD1 (ENSMMUG00000001978) #7	NRAS (ENSMMUG00000049105) #8	CSDE1 (ENSMMUG00000001974) #9	SIKE1 (ENSMMUG00000001973) #11	SYCP1 (ENSMMUG00000017674) #13	TSHB (ENSMMUG00000058261) #14	TSPAN2 (ENSMMUG00000017421) #15	NGF (ENSMMUG00000062180) #16	VANGL1 (ENSMMUG00000008967) #17	CASQ2 (ENSMMUG00000008970) #18	NHLH2 (ENSMMUG00000053366) #19	ENSMMUG00000063202	SLC22A15 (ENSMMUG00000011860) #20	MAB21L3 (ENSMMUG00000000431) #21	ENSMMUG00000041725	ATP1A1 (ENSMMUG00000008151) #22	CD58 (ENSMMUG00000008156)	IGSF3 (ENSMMUG00000008157) #23	CD2 (ENSMMUG00000052649)	PTGFRN (ENSMMUG00000016900) #24	CD101 (ENSMMUG00000016904)	TTF2 (ENSMMUG00000016905) #25	TRIM45 (ENSMMUG00000015976) #26	VTCN1 (ENSMMUG00000016964) #27	MAN1A2 (ENSMMUG00000047035) #28	TENT5C (ENSMMUG00000004907) #29	GDAP2 (ENSMMUG00000008509) #30	WDR3 (ENSMMUG00000008513) #31	SPAG17 (ENSMMUG00000008519) #32	ENSMMUG00000052186	TBX15 (ENSMMUG00000009257) #34
Crab-eating macaque	MODERN SPECIES		AMPD1 (ENSMFAG00000038085) #7	NRAS (ENSMFAG00000036827) #8	CSDE1 (ENSMFAG00000003674) #9	SIKE1 (ENSMFAG00000059908) #11	SYCP1 (ENSMFAG00000043913) #13	TSHB (ENSMFAG00000000330) #14	TSPAN2 (ENSMFAG00000039698) #15	NGF (ENSMFAG00000060447) #16	VANGL1 (ENSMFAG00000000860) #17	CASQ2 (ENSMFAG00000042482) #18	ENSMFAG00000057471 #19	ENSMFAG00000057817	SLC22A15 (ENSMFAG00000042672) #20	MAB21L3 (ENSMFAG00000042466) #21	ENSMFAG00000041093	ATP1A1 (ENSMFAG00000034219) #22	ENSMFAG00000000314	CD58 (ENSMFAG00000042899)	IGSF3 (ENSMFAG00000000910) #23	CD2 (ENSMFAG00000036150)	PTGFRN (ENSMFAG00000038301) #24	CD101 (ENSMFAG00000033865)	ENSMFAG00000042516	TRIM45 (ENSMFAG00000039230) #26	VTCN1 (ENSMFAG00000037561) #27	MAN1A2 (ENSMFAG00000042171) #28	TENT5C (ENSMFAG00000063452) #29	GDAP2 (ENSMFAG00000045882) #30	WDR3 (ENSMFAG00000034570) #31	SPAG17 (ENSMFAG00000043409) #32	TBX15 (ENSMFAG00000044269) #34
Pig-tailed macaque	MODERN SPECIES	556	BCAS2 (ENSMNEG00000029335)	DENND2C (ENSMNEG00000035993)	AMPD1 (ENSMNEG00000040685) #7	NRAS (ENSMNEG00000044823) #8	CSDE1 (ENSMNEG00000045247) #9	SIKE1 (ENSMNEG00000013363) #11	SYCP1 (ENSMNEG00000036344) #13	TSHB (ENSMNEG00000041678) #14	TSPAN2 (ENSMNEG00000043519) #15	NGF (ENSMNEG00000037107) #16	VANGL1 (ENSMNEG00000030336) #17	CASQ2 (ENSMNEG00000028623) #18	NHLH2 (ENSMNEG00000006709) #19	SLC22A15 (ENSMNEG00000036847) #20	MAB21L3 (ENSMNEG00000044981) #21	ATP1A1 (ENSMNEG00000034326) #22	CD58 (ENSMNEG00000030019)	IGSF3 (ENSMNEG00000040709) #23	CD2 (ENSMNEG00000038892)	PTGFRN (ENSMNEG00000040097) #24	CD101 (ENSMNEG00000039661)	TTF2 (ENSMNEG00000042285) #25	TRIM45 (ENSMNEG00000035138) #26	ENSMNEG00000043941 #27	MAN1A2 (ENSMNEG00000031399) #28	TENT5C (ENSMNEG00000016833) #29	GDAP2 (ENSMNEG00000041814) #30	WDR3 (ENSMNEG00000039555) #31	SPAG17 (ENSMNEG00000037993) #32	TBX15 (ENSMNEG00000037058) #34	WARS2 (ENSMNEG00000029069) #35
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000153362.b.g	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300.c #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Olive baboon	MODERN SPECIES		AMPD1 (ENSPANG00000012433) #7	NRAS (ENSPANG00000008181) #8	CSDE1 (ENSPANG00000018873) #9	SIKE1 (ENSPANG00000015792) #11	SYCP1 (ENSPANG00000012296) #13	TSPAN2 (ENSPANG00000008556) #15	NGF (ENSPANG00000048544) #16	ENSPANG00000038005	VANGL1 (ENSPANG00000000935) #17	CASQ2 (ENSPANG00000004482) #18	NHLH2 (ENSPANG00000001481) #19	SLC22A15 (ENSPANG00000003118) #20	MAB21L3 (ENSPANG00000014173) #21	ENSPANG00000037734	ENSPANG00000039208	ATP1A1 (ENSPANG00000001212) #22	CD58 (ENSPANG00000044886)	IGSF3 (ENSPANG00000000305) #23	CD2 (ENSPANG00000015878)	PTGFRN (ENSPANG00000023468) #24	CD101 (ENSPANG00000011817)	ENSPANG00000012432	TRIM45 (ENSPANG00000012295) #26	ENSPANG00000039901	VTCN1 (ENSPANG00000023608) #27	ENSPANG00000043622	ENSPANG00000042496	ENSPANG00000040057	MAN1A2 (ENSPANG00000012472) #28	TENT5C (ENSPANG00000005228) #29	GDAP2 (ENSPANG00000019088) #30
Cercopithecinae_d	ANCESTRAL SPECIES	49	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000153362.b.g	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300.c #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Drill	MODERN SPECIES	1360	BCAS2 (ENSMLEG00000036312)	DENND2C (ENSMLEG00000001523)	AMPD1 (ENSMLEG00000032457) #7	NRAS (ENSMLEG00000039333) #8	CSDE1 (ENSMLEG00000038673) #9	SIKE1 (ENSMLEG00000034245) #11	SYCP1 (ENSMLEG00000027871) #13	TSHB (ENSMLEG00000040982) #14	TSPAN2 (ENSMLEG00000036280) #15	NGF (ENSMLEG00000042620) #16	VANGL1 (ENSMLEG00000039246) #17	CASQ2 (ENSMLEG00000038887) #18	NHLH2 (ENSMLEG00000026800) #19	SLC22A15 (ENSMLEG00000030172) #20	MAB21L3 (ENSMLEG00000006311) #21	ATP1A1 (ENSMLEG00000030629) #22	CD58 (ENSMLEG00000033488)	ENSMLEG00000044327	IGSF3 (ENSMLEG00000000562) #23	CD2 (ENSMLEG00000036866)	PTGFRN (ENSMLEG00000033407) #24	CD101 (ENSMLEG00000039483)	TTF2 (ENSMLEG00000041549) #25	TRIM45 (ENSMLEG00000034608) #26	VTCN1 (ENSMLEG00000031487) #27	MAN1A2 (ENSMLEG00000041597) #28	TENT5C (ENSMLEG00000012342) #29	GDAP2 (ENSMLEG00000041705) #30	WDR3 (ENSMLEG00000035516) #31	SPAG17 (ENSMLEG00000043640) #32
Sooty mangabey	MODERN SPECIES	246	DENND2C (ENSCATG00000008808)	AMPD1 (ENSCATG00000036481) #7	NRAS (ENSCATG00000040984) #8	CSDE1 (ENSCATG00000036962) #9	SIKE1 (ENSCATG00000005298) #11	ENSCATG00000039685	SYCP1 (ENSCATG00000039270) #13	TSHB (ENSCATG00000039665) #14	TSPAN2 (ENSCATG00000034149) #15	NGF (ENSCATG00000017585) #16	VANGL1 (ENSCATG00000009145) #17	CASQ2 (ENSCATG00000004694) #18	NHLH2 (ENSCATG00000020039) #19	SLC22A15 (ENSCATG00000031862) #20	MAB21L3 (ENSCATG00000034482) #21	ATP1A1 (ENSCATG00000032036) #22	ENSCATG00000032280	CD58 (ENSCATG00000032372)	IGSF3 (ENSCATG00000038248) #23	CD2 (ENSCATG00000038663)	PTGFRN (ENSCATG00000034409) #24	CD101 (ENSCATG00000040181)
Vervet Monkey	MODERN SPECIES	12	DENND2C (ENSCSAG00000001653)	AMPD1 (ENSCSAG00000001655) #7	NRAS (ENSCSAG00000001656) #8	CSDE1 (ENSCSAG00000001658) #9	SIKE1 (ENSCSAG00000001660) #11	SYCP1 (ENSCSAG00000001672) #13	TSHB (ENSCSAG00000001678) #14	TSPAN2 (ENSCSAG00000001681) #15	NGF (ENSCSAG00000000171) #16	VANGL1 (ENSCSAG00000001684) #17	CASQ2 (ENSCSAG00000001685) #18	NHLH2 (ENSCSAG00000000172) #19	SLC22A15 (ENSCSAG00000001686) #20	MAB21L3 (ENSCSAG00000001688) #21	ENSCSAG00000001690	ATP1A1 (ENSCSAG00000001691) #22	ENSCSAG00000001692	CD58 (ENSCSAG00000001694)	IGSF3 (ENSCSAG00000001695) #23	CD2 (ENSCSAG00000001696)	PTGFRN (ENSCSAG00000001697) #24	CD101 (ENSCSAG00000001698)	ENSCSAG00000001699	TRIM45 (ENSCSAG00000001700) #26	VTCN1 (ENSCSAG00000001701) #27	MAN1A2 (ENSCSAG00000001702) #28	TENT5C (ENSCSAG00000000173) #29	GDAP2 (ENSCSAG00000001704) #30	WDR3 (ENSCSAG00000001705) #31	SPAG17 (ENSCSAG00000001708) #32	TBX15 (ENSCSAG00000001712) #34
Rhinopithecus	ANCESTRAL SPECIES	10	ENSGT00390000008859.b.d.k.a.a	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950.m #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000153362.b.g	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300.c #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Golden snub-nosed monkey	MODERN SPECIES	1359											VANGL1 (ENSRROG00000045595) #17	CASQ2 (ENSRROG00000032390) #18	NHLH2 (ENSRROG00000028198) #19	SLC22A15 (ENSRROG00000038809) #20	MAB21L3 (ENSRROG00000041625) #21	ATP1A1 (ENSRROG00000044731) #22	ENSRROG00000032840	CD58 (ENSRROG00000001604)	IGSF3 (ENSRROG00000032335) #23	CD2 (ENSRROG00000023361)	PTGFRN (ENSRROG00000044241) #24	CD101 (ENSRROG00000039983)	TTF2 (ENSRROG00000013287) #25	TRIM45 (ENSRROG00000032031) #26	ENSRROG00000034154 #27
Black snub-nosed monkey	MODERN SPECIES	299	BCAS2 (ENSRBIG00000036310)	DENND2C (ENSRBIG00000040882)	AMPD1 (ENSRBIG00000042678) #7	NRAS (ENSRBIG00000043132) #8	ENSRBIG00000038966 #9	SIKE1 (ENSRBIG00000042450) #11	SYCP1 (ENSRBIG00000040488) #13	TSHB (ENSRBIG00000030494) #14	TSPAN2 (ENSRBIG00000040980) #15	NGF (ENSRBIG00000043863) #16	VANGL1 (ENSRBIG00000040389) #17	CASQ2 (ENSRBIG00000044022) #18	NHLH2 (ENSRBIG00000021541) #19	SLC22A15 (ENSRBIG00000008924) #20	MAB21L3 (ENSRBIG00000028983) #21	ATP1A1 (ENSRBIG00000015454) #22	CD58 (ENSRBIG00000044416)	ENSRBIG00000035126	IGSF3 (ENSRBIG00000038679) #23	CD2 (ENSRBIG00000042753)	PTGFRN (ENSRBIG00000044418) #24	CD101 (ENSRBIG00000034556)	TTF2 (ENSRBIG00000042651) #25	TRIM45 (ENSRBIG00000027871) #26	ENSRBIG00000036563 #27	MAN1A2 (ENSRBIG00000030646) #28	TENT5C (ENSRBIG00000030666) #29	GDAP2 (ENSRBIG00000041462) #30	WDR3 (ENSRBIG00000039149) #31	SPAG17 (ENSRBIG00000041783) #32	TBX15 (ENSRBIG00000029551) #34
Platyrrhini	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947.u.a #8	ENSGT00390000016950.o.a #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000153362.b.g	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Cebidae	ANCESTRAL SPECIES	1	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947.u.a #8	ENSGT00390000016950.o.a #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000153362.b.g	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Cebidae_a	ANCESTRAL SPECIES	41	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947.u.a #8	ENSGT00390000016950.o.a #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000153362.b.g	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Capuchin	MODERN SPECIES	32	DENND2C (ENSCCAG00000021424)	AMPD1 (ENSCCAG00000021136) #7	NRAS (ENSCCAG00000030765) #8	ENSCCAG00000036794 #9	SIKE1 (ENSCCAG00000036846) #11	ENSCCAG00000026846	SYCP1 (ENSCCAG00000034214) #13	TSHB (ENSCCAG00000029875) #14	TSPAN2 (ENSCCAG00000035942) #15	NGF (ENSCCAG00000020128) #16	VANGL1 (ENSCCAG00000032113) #17	CASQ2 (ENSCCAG00000012372) #18	NHLH2 (ENSCCAG00000017644) #19	SLC22A15 (ENSCCAG00000030828) #20	MAB21L3 (ENSCCAG00000018744) #21	ATP1A1 (ENSCCAG00000036026) #22	CD58 (ENSCCAG00000024820)	IGSF3 (ENSCCAG00000035554) #23	CD2 (ENSCCAG00000036008)	ENSCCAG00000037368	PTGFRN (ENSCCAG00000034342) #24	CD101 (ENSCCAG00000037110)	TTF2 (ENSCCAG00000032675) #25	TRIM45 (ENSCCAG00000010371) #26	VTCN1 (ENSCCAG00000037336) #27	MAN1A2 (ENSCCAG00000034354) #28	TENT5C (ENSCCAG00000020387) #29	GDAP2 (ENSCCAG00000024697) #30	WDR3 (ENSCCAG00000037237) #31	ENSCCAG00000035368	SPAG17 (ENSCCAG00000023412) #32
Bolivian squirrel monkey	MODERN SPECIES	98	BCAS2 (ENSSBOG00000027778)	DENND2C (ENSSBOG00000030035)	AMPD1 (ENSSBOG00000028352) #7	NRAS (ENSSBOG00000021039) #8	CSDE1 (ENSSBOG00000035592) #9	SIKE1 (ENSSBOG00000021497) #11	SYCP1 (ENSSBOG00000024910) #13	TSHB (ENSSBOG00000035791) #14	TSPAN2 (ENSSBOG00000002008) #15	NGF (ENSSBOG00000029889) #16	VANGL1 (ENSSBOG00000032697) #17	CASQ2 (ENSSBOG00000003704) #18	NHLH2 (ENSSBOG00000014733) #19	SLC22A15 (ENSSBOG00000031792) #20	MAB21L3 (ENSSBOG00000035896) #21	ATP1A1 (ENSSBOG00000020417) #22	ENSSBOG00000015813	CD58 (ENSSBOG00000032505)	ENSSBOG00000022544	IGSF3 (ENSSBOG00000024073) #23	CD2 (ENSSBOG00000022804)	ENSSBOG00000027638	PTGFRN (ENSSBOG00000020242) #24	ENSSBOG00000020480	CD101 (ENSSBOG00000024092)	TTF2 (ENSSBOG00000022555) #25	TRIM45 (ENSSBOG00000033971) #26	VTCN1 (ENSSBOG00000025248) #27	MAN1A2 (ENSSBOG00000027903) #28	TENT5C (ENSSBOG00000019248) #29	GDAP2 (ENSSBOG00000029276) #30
Marmoset	MODERN SPECIES	19	AMPD1 (ENSCJAG00000012494) #7	NRAS (ENSCJAG00000036517) #8	CSDE1 (ENSCJAG00000012565) #9	SIKE1 (ENSCJAG00000012663) #11	SYCP1 (ENSCJAG00000012678) #13	TSPAN2 (ENSCJAG00000046657) #15	TSHB (ENSCJAG00000059226) #14	NGF (ENSCJAG00000070914) #16	VANGL1 (ENSCJAG00000012756) #17	CASQ2 (ENSCJAG00000012776) #18	NHLH2 (ENSCJAG00000079748) #19	SLC22A15 (ENSCJAG00000012813) #20	MAB21L3 (ENSCJAG00000006194) #21	ENSCJAG00000075676	ENSCJAG00000071068	ATP1A1 (ENSCJAG00000006058) #22	ENSCJAG00000071790	ENSCJAG00000006049	IGSF3 (ENSCJAG00000006006) #23	CD2 (ENSCJAG00000062649)	PTGFRN (ENSCJAG00000005961) #24	CD101 (ENSCJAG00000005944)	TTF2 (ENSCJAG00000005909) #25	TRIM45 (ENSCJAG00000005897) #26	VTCN1 (ENSCJAG00000005878) #27	ENSCJAG00000074653	MAN1A2 (ENSCJAG00000005860) #28	TENT5C (ENSCJAG00000039217) #29	GDAP2 (ENSCJAG00000005808) #30	WDR3 (ENSCJAG00000005749) #31	SPAG17 (ENSCJAG00000076495) #32
Mas night monkey	MODERN SPECIES	775										CTTNBP2NL (ENSANAG00000024298)	VANGL1 (ENSANAG00000031103) #17	CASQ2 (ENSANAG00000024042) #18	NHLH2 (ENSANAG00000019186) #19	SLC22A15 (ENSANAG00000034011) #20	MAB21L3 (ENSANAG00000033656) #21	ATP1A1 (ENSANAG00000033098) #22	CD58 (ENSANAG00000024219)	IGSF3 (ENSANAG00000034335) #23	CD2 (ENSANAG00000035044)	PTGFRN (ENSANAG00000034823) #24	ENSANAG00000029336	CD101 (ENSANAG00000034882)	TTF2 (ENSANAG00000020654) #25	TRIM45 (ENSANAG00000020776) #26	VTCN1 (ENSANAG00000034173) #27	MAN1A2 (ENSANAG00000025558) #28	TENT5C (ENSANAG00000020216) #29	GDAP2 (ENSANAG00000019806) #30	WDR3 (ENSANAG00000033348) #31	SPAG17 (ENSANAG00000023109) #32	TBX15 (ENSANAG00000031356) #34
Tarsier	MODERN SPECIES	7147															CLEC2L (ENSTSYG00000028144)	ATP1A1 (ENSTSYG00000001244) #22
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Lemuriformes	ANCESTRAL SPECIES		ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Mouse lemur	MODERN SPECIES	11	FCER1G (ENSMICG00000007278)	ENSMICG00000035930	TOMM40L (ENSMICG00000007287)	NR1I3 (ENSMICG00000007296)	PCP4L1 (ENSMICG00000036221)	MPZ (ENSMICG00000007313)	SDHC (ENSMICG00000007317)	CFAP126 (ENSMICG00000045246)	ENSMICG00000014956	ENSMICG00000030823	VANGL1 (ENSMICG00000002838) #17	CASQ2 (ENSMICG00000002848) #18	NHLH2 (ENSMICG00000045301) #19	SLC22A15 (ENSMICG00000009801) #20	MAB21L3 (ENSMICG00000032799) #21	ATP1A1 (ENSMICG00000011083) #22	ENSMICG00000042187	CD58 (ENSMICG00000042112)	IGSF3 (ENSMICG00000016709) #23	CD2 (ENSMICG00000011899)	PTGFRN (ENSMICG00000009691) #24	CD101 (ENSMICG00000009704)	ENSMICG00000009715	TRIM45 (ENSMICG00000009751) #26	VTCN1 (ENSMICG00000009755) #27	ENSMICG00000009764 #28	TENT5C (ENSMICG00000001773) #29	GDAP2 (ENSMICG00000001775) #30	WDR3 (ENSMICG00000001783) #31	SPAG17 (ENSMICG00000001795) #32	TBX15 (ENSMICG00000048122) #34
Lemuriformes_a	ANCESTRAL SPECIES	31	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Coquerels sifaka	MODERN SPECIES	749													NHLH2 (ENSPCOG00000025921) #19	SLC22A15 (ENSPCOG00000005315) #20	MAB21L3 (ENSPCOG00000018329) #21	ATP1A1 (ENSPCOG00000017672) #22	ENSPCOG00000013877	IGSF3 (ENSPCOG00000017111) #23	CD2 (ENSPCOG00000014420)	PTGFRN (ENSPCOG00000013705) #24	CD101 (ENSPCOG00000016049)
Greater bamboo lemur	MODERN SPECIES	511	BCAS2 (ENSPSMG00000013954)	DENND2C (ENSPSMG00000013999)	AMPD1 (ENSPSMG00000014033) #7	NRAS (ENSPSMG00000014097) #8	CSDE1 (ENSPSMG00000014304) #9	SIKE1 (ENSPSMG00000014489) #11	SYCP1 (ENSPSMG00000014676) #13	TSHB (ENSPSMG00000014734) #14	TSPAN2 (ENSPSMG00000014758) #15	NGF (ENSPSMG00000014770) #16	VANGL1 (ENSPSMG00000014794) #17	CASQ2 (ENSPSMG00000014811) #18	NHLH2 (ENSPSMG00000014821) #19	SLC22A15 (ENSPSMG00000014868) #20	MAB21L3 (ENSPSMG00000014900) #21	ATP1A1 (ENSPSMG00000015000) #22	CD58 (ENSPSMG00000015016)	IGSF3 (ENSPSMG00000015029) #23	CD2 (ENSPSMG00000015045)	PTGFRN (ENSPSMG00000015068) #24	CD101 (ENSPSMG00000015090)	TTF2 (ENSPSMG00000015117) #25	TRIM45 (ENSPSMG00000015160) #26	VTCN1 (ENSPSMG00000015204) #27	MAN1A2 (ENSPSMG00000015225) #28	ENSPSMG00000015236	TENT5C (ENSPSMG00000015247) #29	GDAP2 (ENSPSMG00000015264) #30	WDR3 (ENSPSMG00000015414) #31	SPAG17 (ENSPSMG00000015573) #32	TBX15 (ENSPSMG00000015582) #34
Bushbaby	MODERN SPECIES	188	AMPD1 (ENSOGAG00000012124) #7	NRAS (ENSOGAG00000028680) #8	CSDE1 (ENSOGAG00000012127) #9	SIKE1 (ENSOGAG00000005952) #11	ENSOGAG00000026550	ENSOGAG00000030317 #12	SYCP1 (ENSOGAG00000000392) #13	TSHB (ENSOGAG00000001448) #14	TSPAN2 (ENSOGAG00000011521) #15	NGF (ENSOGAG00000026573) #16	VANGL1 (ENSOGAG00000014403) #17	CASQ2 (ENSOGAG00000014407) #18	NHLH2 (ENSOGAG00000034540) #19	SLC22A15 (ENSOGAG00000002894) #20	MAB21L3 (ENSOGAG00000002896) #21	ATP1A1 (ENSOGAG00000000187) #22	ENSOGAG00000002250	IGSF3 (ENSOGAG00000017055) #23	CD2 (ENSOGAG00000031305)	PTGFRN (ENSOGAG00000005271) #24	CD101 (ENSOGAG00000005273)	TTF2 (ENSOGAG00000009039) #25	TRIM45 (ENSOGAG00000006634) #26	VTCN1 (ENSOGAG00000006636) #27	MAN1A2 (ENSOGAG00000003687) #28	ENSOGAG00000028154	TENT5C (ENSOGAG00000033246) #29	GDAP2 (ENSOGAG00000007395) #30	WDR3 (ENSOGAG00000007399) #31	SPAG17 (ENSOGAG00000007408) #32	TBX15 (ENSOGAG00000007282) #34
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT01100000263543.a	ENSGT00940000159013 #34
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154840.b #22
Hedgehog	MODERN SPECIES	5565															ENSEEUG00000003265	ATP1A1 (ENSEEUG00000003276) #22
Common shrew	MODERN SPECIES	11433																ATP1A1 (ENSSARG00000004972) #22
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT01100000263543.a.j	ENSGT00940000159013 #34
Artiodactyla	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Suina	ANCESTRAL SPECIES	32	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Pig	MODERN SPECIES	12	DENND2C (ENSSSCG00000006755)	AMPD1 (ENSSSCG00000006754) #7	NRAS (ENSSSCG00000032477) #8	CSDE1 (ENSSSCG00000006752) #9	SIKE1 (ENSSSCG00000006751) #11	SYCP1 (ENSSSCG00000006750) #13	TSHB (ENSSSCG00000006749) #14	TSPAN2 (ENSSSCG00000006748) #15	NGF (ENSSSCG00000032417) #16	ENSSSCG00000042421	VANGL1 (ENSSSCG00000006746) #17	CASQ2 (ENSSSCG00000061647) #18	NHLH2 (ENSSSCG00000006744) #19	SLC22A15 (ENSSSCG00000006743) #20	MAB21L3 (ENSSSCG00000006742) #21	ATP1A1 (ENSSSCG00000006740) #22	ENSSSCG00000040692	CD58 (ENSSSCG00000006738)	IGSF3 (ENSSSCG00000006737) #23	CD2 (ENSSSCG00000006736)	PTGFRN (ENSSSCG00000006735) #24	CD101 (ENSSSCG00000006734)	TTF2 (ENSSSCG00000006733) #25	TRIM45 (ENSSSCG00000006732) #26	ENSSSCG00000044178	VTCN1 (ENSSSCG00000006731) #27	MAN1A2 (ENSSSCG00000006730) #28	TENT5C (ENSSSCG00000006729) #29	ENSSSCG00000040549	GDAP2 (ENSSSCG00000006728) #30	WDR3 (ENSSSCG00000006727) #31
Chacoan peccary	MODERN SPECIES	29	TIMM8B (ENSCWAG00000003395)	SDHD (ENSCWAG00000003372)	IL18 (ENSCWAG00000003351)	TEX12 (ENSCWAG00000003333)	BCO2 (ENSCWAG00000003115)	ENSCWAG00000003073	ENSCWAG00000003060	TSHB (ENSCWAG00000003050) #14	TSPAN2 (ENSCWAG00000003035) #15	NGF (ENSCWAG00000003021) #16	VANGL1 (ENSCWAG00000002974) #17	CASQ2 (ENSCWAG00000002945) #18	NHLH2 (ENSCWAG00000002933) #19	SLC22A15 (ENSCWAG00000002907) #20	MAB21L3 (ENSCWAG00000002889) #21	ATP1A1 (ENSCWAG00000002813) #22	ENSCWAG00000002786	IGSF3 (ENSCWAG00000002762) #23	ENSCWAG00000002742	PTGFRN (ENSCWAG00000002730) #24	CD101 (ENSCWAG00000002714)	TTF2 (ENSCWAG00000002699) #25	TRIM45 (ENSCWAG00000002677) #26	VTCN1 (ENSCWAG00000002628) #27	MAN1A2 (ENSCWAG00000002585) #28	TENT5C (ENSCWAG00000002576) #29	GDAP2 (ENSCWAG00000002542) #30	WDR3 (ENSCWAG00000002500) #31	SPAG17 (ENSCWAG00000002431) #32	TBX15 (ENSCWAG00000002391) #34	WARS2 (ENSCWAG00000002377) #35
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Cetacea	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00950000183109.c.a.a.n	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Odontoceti	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00950000183109.c.a.a.n	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000153503.a.b.w.b	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00950000183109.c.a.a.m.b	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32
Monodontidae	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000153503.a.b.w.b	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00950000183109.c.a.a.m.b.c	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32
Narwhal	MODERN SPECIES	304	DENND2C (ENSMMNG00015015542)	AMPD1 (ENSMMNG00015015503) #7	NRAS (ENSMMNG00015015474) #8	CSDE1 (ENSMMNG00015015367) #9	SIKE1 (ENSMMNG00015015257) #11	ENSMMNG00015004059 #12	SYCP1 (ENSMMNG00015003966) #13	TSHB (ENSMMNG00015003906) #14	TSPAN2 (ENSMMNG00015003882) #15	NGF (ENSMMNG00015003864) #16	VANGL1 (ENSMMNG00015003837) #17	CASQ2 (ENSMMNG00015003803) #18	NHLH2 (ENSMMNG00015003773) #19	SLC22A15 (ENSMMNG00015003758) #20	MAB21L3 (ENSMMNG00015003735) #21	ATP1A1 (ENSMMNG00015003636) #22	ENSMMNG00015003565	IGSF3 (ENSMMNG00015003523) #23	CD2 (ENSMMNG00015003495)	ENSMMNG00015003481	ENSMMNG00015003468	PTGFRN (ENSMMNG00015003441) #24	CD101 (ENSMMNG00015003430)	ENSMMNG00015003412	TTF2 (ENSMMNG00015003336) #25	TRIM45 (ENSMMNG00015003284) #26	VTCN1 (ENSMMNG00015003230) #27	MAN1A2 (ENSMMNG00015003175) #28	TENT5C (ENSMMNG00015003165) #29	GDAP2 (ENSMMNG00015003116) #30	WDR3 (ENSMMNG00015003055) #31
Beluga whale	MODERN SPECIES	74	DENND2C (ENSDLEG00000016190)	AMPD1 (ENSDLEG00000016228) #7	NRAS (ENSDLEG00000016286) #8	CSDE1 (ENSDLEG00000016299) #9	SIKE1 (ENSDLEG00000016348) #11	ENSDLEG00000016361 #12	SYCP1 (ENSDLEG00000016413) #13	TSHB (ENSDLEG00000016555) #14	TSPAN2 (ENSDLEG00000016564) #15	NGF (ENSDLEG00000016573) #16	VANGL1 (ENSDLEG00000016587) #17	CASQ2 (ENSDLEG00000016613) #18	NHLH2 (ENSDLEG00000016681) #19	SLC22A15 (ENSDLEG00000016683) #20	MAB21L3 (ENSDLEG00000016704) #21	ATP1A1 (ENSDLEG00000016719) #22	CD58 (ENSDLEG00000016764)	IGSF3 (ENSDLEG00000016776) #23	CD2 (ENSDLEG00000016800)	ENSDLEG00000016812	PTGFRN (ENSDLEG00000016825) #24	CD101 (ENSDLEG00000016843)	ENSDLEG00000016876	TTF2 (ENSDLEG00000016896) #25	TRIM45 (ENSDLEG00000016923) #26	MAN1A2 (ENSDLEG00000007933) #28	FAM46C (ENSDLEG00000007955) #29	GDAP2 (ENSDLEG00000007964) #30	WDR3 (ENSDLEG00000007988) #31	SPAG17 (ENSDLEG00000008058) #32	TBX15 (ENSDLEG00000008335) #34
Vaquita	MODERN SPECIES		NRAS (ENSPSNG00000002442) #8	CSDE1 (ENSPSNG00000002494) #9	SIKE1 (ENSPSNG00000002576) #11	ENSPSNG00000002610 #12	SYCP1 (ENSPSNG00000002726) #13	TSHB (ENSPSNG00000002854) #14	TSPAN2 (ENSPSNG00000002875) #15	ENSPSNG00000002914	NGF (ENSPSNG00000002934) #16	VANGL1 (ENSPSNG00000002964) #17	CASQ2 (ENSPSNG00000002987) #18	NHLH2 (ENSPSNG00000003008) #19	ENSPSNG00000003023	SLC22A15 (ENSPSNG00000003035) #20	MAB21L3 (ENSPSNG00000003053) #21	ATP1A1 (ENSPSNG00000003098) #22	ENSPSNG00000003168	IGSF3 (ENSPSNG00000003204) #23	CD2 (ENSPSNG00000003248)	ENSPSNG00000003272	ENSPSNG00000003280	ENSPSNG00000003294	PTGFRN (ENSPSNG00000003312) #24	CD101 (ENSPSNG00000003355)	ENSPSNG00000003381	TTF2 (ENSPSNG00000003422) #25	TRIM45 (ENSPSNG00000003461) #26	VTCN1 (ENSPSNG00000003497) #27	MAN1A2 (ENSPSNG00000003561) #28	TENT5C (ENSPSNG00000003573) #29	GDAP2 (ENSPSNG00000003591) #30
Dolphin	MODERN SPECIES	1443																ATP1A1 (ENSTTRG00000011557) #22
Sperm whale	MODERN SPECIES	15	SIKE1 (ENSPCTG00005000661) #11	ENSPCTG00005000647	ENSPCTG00005000637 #12	ENSPCTG00005000620	ENSPCTG00005000610	SYCP1 (ENSPCTG00005000455) #13	ENSPCTG00005000403	ENSPCTG00005000393	TSHB (ENSPCTG00005000377) #14	TSPAN2 (ENSPCTG00005000352) #15	NGF (ENSPCTG00005000314) #16	VANGL1 (ENSPCTG00005000293) #17	CASQ2 (ENSPCTG00005000263) #18	NHLH2 (ENSPCTG00005000232) #19	SLC22A15 (ENSPCTG00005018619) #20	ATP1A1 (ENSPCTG00005018474) #22	CD58 (ENSPCTG00005018443)	IGSF3 (ENSPCTG00005018364) #23	CD2 (ENSPCTG00005018150)	PTGFRN (ENSPCTG00005018118) #24	CD101 (ENSPCTG00005018027)	ENSPCTG00005017986	TTF2 (ENSPCTG00005017917) #25	TRIM45 (ENSPCTG00005017746) #26	VTCN1 (ENSPCTG00005017689) #27	MAN1A2 (ENSPCTG00005017570) #28	TENT5C (ENSPCTG00005017545) #29	GDAP2 (ENSPCTG00005017454) #30	WDR3 (ENSPCTG00005017311) #31	SPAG17 (ENSPCTG00005016769) #32	TBX15 (ENSPCTG00005016688) #34
Blue whale	MODERN SPECIES		DENND2C (ENSBMSG00010009901)	AMPD1 (ENSBMSG00010009959) #7	NRAS (ENSBMSG00010000036) #8	CSDE1 (ENSBMSG00010000067) #9	SIKE1 (ENSBMSG00010000128) #11	ENSBMSG00010000161 #12	SYCP1 (ENSBMSG00010000313) #13	TSHB (ENSBMSG00010000462) #14	TSPAN2 (ENSBMSG00010000486) #15	NGF (ENSBMSG00010000509) #16	VANGL1 (ENSBMSG00010000530) #17	CASQ2 (ENSBMSG00010000556) #18	NHLH2 (ENSBMSG00010000584) #19	SLC22A15 (ENSBMSG00010000600) #20	MAB21L3 (ENSBMSG00010000624) #21	ATP1A1 (ENSBMSG00010000656) #22	CD58 (ENSBMSG00010000750)	IGSF3 (ENSBMSG00010000848) #23	CD2 (ENSBMSG00010000892)	PTGFRN (ENSBMSG00010000912) #24	CD101 (ENSBMSG00010000941)	ENSBMSG00010000968	TTF2 (ENSBMSG00010000984) #25	TRIM45 (ENSBMSG00010001017) #26	VTCN1 (ENSBMSG00010001035) #27	MAN1A2 (ENSBMSG00010001075) #28	TENT5C (ENSBMSG00010001103) #29	ENSBMSG00010001110	GDAP2 (ENSBMSG00010001124) #30	WDR3 (ENSBMSG00010001140) #31	ENSBMSG00010001169 #32
Pecora	ANCESTRAL SPECIES	2	ENSGT00390000014494.qb	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Percora_a	ANCESTRAL SPECIES	1	ENSGT00390000014494.pb	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Bovidae	ANCESTRAL SPECIES	1	ENSGT00390000014494.pb	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Caprinae	ANCESTRAL SPECIES	2	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000155337.g.a	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Rambouillet Sheep	MODERN SPECIES		AMPD1 (ENSOARG00020021414) #7	NRAS (ENSOARG00020021627) #8	CSDE1 (ENSOARG00020021728) #9	SIKE1 (ENSOARG00020022151) #11	SYCP1 (ENSOARG00020022243) #13	TSHB (ENSOARG00020022677) #14	TSPAN2 (ENSOARG00020022702) #15	NGF (ENSOARG00020022760) #16	VANGL1 (ENSOARG00020022787) #17	CASQ2 (ENSOARG00020022877) #18	NHLH2 (ENSOARG00020022935) #19	ENSOARG00020000086	SLC22A15 (ENSOARG00020000158) #20	MAB21L3 (ENSOARG00020000215) #21	ENSOARG00020000242	ATP1A1 (ENSOARG00020000332) #22	ENSOARG00020000728	ENSOARG00020000743	IGSF3 (ENSOARG00020000764) #23	CD2 (ENSOARG00020000791)	PTGFRN (ENSOARG00020000811) #24	TTF2 (ENSOARG00020000877) #25	TRIM45 (ENSOARG00020001002) #26	VTCN1 (ENSOARG00020001040) #27	MAN1A2 (ENSOARG00020001101) #28	TENT5C (ENSOARG00020001120) #29	GDAP2 (ENSOARG00020001139) #30	WDR3 (ENSOARG00020001170) #31	ENSOARG00020001200	TBX15 (ENSOARG00020001253) #34	WARS2 (ENSOARG00020001286) #35
Goat	MODERN SPECIES	22	NRAS (ENSCHIG00000023175) #8	CSDE1 (ENSCHIG00000017250) #9	SIKE1 (ENSCHIG00000014644) #11	SYCP1 (ENSCHIG00000019909) #13	TSHB (ENSCHIG00000007505) #14	TSPAN2 (ENSCHIG00000007588) #15	NGF (ENSCHIG00000007731) #16	VANGL1 (ENSCHIG00000011522) #17	CASQ2 (ENSCHIG00000014376) #18	ENSCHIG00000017520	NHLH2 (ENSCHIG00000007315) #19	ENSCHIG00000008508	SLC22A15 (ENSCHIG00000022810) #20	MAB21L3 (ENSCHIG00000019025) #21	ENSCHIG00000005925	ATP1A1 (ENSCHIG00000017191) #22	ENSCHIG00000022779	IGSF3 (ENSCHIG00000003902) #23	CD2 (ENSCHIG00000023355)	PTGFRN (ENSCHIG00000017906) #24	CD101 (ENSCHIG00000025123)	TTF2 (ENSCHIG00000020785) #25	TRIM45 (ENSCHIG00000018385) #26	ENSCHIG00000007372	VTCN1 (ENSCHIG00000019630) #27	MAN1A2 (ENSCHIG00000013056) #28	TENT5C (ENSCHIG00000005579) #29	GDAP2 (ENSCHIG00000019563) #30	WDR3 (ENSCHIG00000010490) #31	SPAG17 (ENSCHIG00000014664) #32	ENSCHIG00000014484
Bovinae	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950.g #9	ENSGT00390000016950.h #9	ENSGT00390000018003.a #11	ENSGT00390000009724.l.w.b.c.a	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Bos	ANCESTRAL SPECIES		ENSGT00940000158947 #8	ENSGT00390000016950.g #9	ENSGT00390000016950.h #9	ENSGT00390000018003.a #11	ENSGT00390000009724.l.w.b.c.a	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.b.a.a	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Bos_a	ANCESTRAL SPECIES	32	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950.h #9	ENSGT00390000018003.a #11	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.b.a.a	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Domestic yak	MODERN SPECIES	22	SIKE1 (ENSBGRG00000006884) #11	ENSBGRG00000006936	SYCP1 (ENSBGRG00000006966) #13	TSHB (ENSBGRG00000007103) #14	ENSBGRG00000007154	TSPAN2 (ENSBGRG00000007175) #15	NGF (ENSBGRG00000007446) #16	ENSBGRG00000007514	VANGL1 (ENSBGRG00000007582) #17	CASQ2 (ENSBGRG00000007757) #18	NHLH2 (ENSBGRG00000007908) #19	SLC22A15 (ENSBGRG00000007927) #20	ENSBGRG00000008009	MAB21L3 (ENSBGRG00000008095) #21	ENSBGRG00000008185	ATP1A1 (ENSBGRG00000008222) #22	ENSBGRG00000008748	IGSF3 (ENSBGRG00000008798) #23	ENSBGRG00000008897	ENSBGRG00000008942	PTGFRN (ENSBGRG00000009035) #24	CD101 (ENSBGRG00000009173)	TTF2 (ENSBGRG00000009266) #25	TRIM45 (ENSBGRG00000009569) #26	VTCN1 (ENSBGRG00000009691) #27	MAN1A2 (ENSBGRG00000009916) #28	ENSBGRG00000010295	TENT5C (ENSBGRG00000010319) #29	GDAP2 (ENSBGRG00000010327) #30	WDR3 (ENSBGRG00000010398) #31	SPAG17 (ENSBGRG00000011326) #32
Wild yak	MODERN SPECIES	1351																ATP1A1 (ENSBMUG00000016316) #22	ENSBMUG00000016329	IGSF3 (ENSBMUG00000016378) #23	CD2 (ENSBMUG00000016401)	PTGFRN (ENSBMUG00000016414) #24	CD101 (ENSBMUG00000016436)	TTF2 (ENSBMUG00000016453) #25	TRIM45 (ENSBMUG00000016474) #26	VTCN1 (ENSBMUG00000016517) #27	MAN1A2 (ENSBMUG00000016570) #28	ENSBMUG00000016594
Bos_b	ANCESTRAL SPECIES	1	ENSGT00940000158947 #8	ENSGT00390000016950.g #9	ENSGT00390000018003.a #11	ENSGT00390000009724.l.w.b.c.a	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000154175.i.b.l.b	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.b.a.a	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693.a #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Hybrid Bos Indicus	MODERN SPECIES	22	CSDE1 (ENSBIXG00005002632) #9	SIKE1 (ENSBIXG00005020065) #11	ENSBIXG00005020069	SYCP1 (ENSBIXG00005003311) #13	TSHB (ENSBIXG00005020177) #14	TSPAN2 (ENSBIXG00005003349) #15	NGF (ENSBIXG00005020234) #16	ENSBIXG00005005532	VANGL1 (ENSBIXG00005020258) #17	CASQ2 (ENSBIXG00005020297) #18	NHLH2 (ENSBIXG00005020316) #19	ENSBIXG00005020331	SLC22A15 (ENSBIXG00005020361) #20	MAB21L3 (ENSBIXG00005003444) #21	ENSBIXG00005020442	ATP1A1 (ENSBIXG00005020549) #22	ENSBIXG00005003478	ENSBIXG00005020612	IGSF3 (ENSBIXG00005003497) #23	CD2 (ENSBIXG00005020730)	PTGFRN (ENSBIXG00005020799) #24	CD101 (ENSBIXG00005005743)	TTF2 (ENSBIXG00005020946) #25	TRIM45 (ENSBIXG00005006265) #26	VTCN1 (ENSBIXG00005003569) #27	ENSBIXG00005021170	MAN1A2 (ENSBIXG00005021491) #28	GDAP2 (ENSBIXG00005007307) #30	WDR3 (ENSBIXG00005003644) #31	ENSBIXG00005021669 #32	TBX15 (ENSBIXG00005007374) #34
Cow	MODERN SPECIES	22	NRAS (ENSBTAG00000046797) #8	CSDE1 (ENSBTAG00000000678) #9	SIKE1 (ENSBTAG00000015977) #11	ENSBTAG00000032057	SYCP1 (ENSBTAG00000032071) #13	TSHB (ENSBTAG00000006295) #14	TSPAN2 (ENSBTAG00000015961) #15	NGF (ENSBTAG00000007446) #16	VANGL1 (ENSBTAG00000005788) #17	CASQ2 (ENSBTAG00000011500) #18	NHLH2 (ENSBTAG00000015067) #19	ENSBTAG00000051199	SLC22A15 (ENSBTAG00000000664) #20	MAB21L3 (ENSBTAG00000001406) #21	ENSBTAG00000050694	ATP1A1 (ENSBTAG00000001246) #22	CD58 (ENSBTAG00000040131)	IGSF3 (ENSBTAG00000004849) #23	CD2 (ENSBTAG00000017256)	PTGFRN (ENSBTAG00000008022) #24	CD101 (ENSBTAG00000018203)	TTF2 (ENSBTAG00000015392) #25	TRIM45 (ENSBTAG00000001748) #26	VTCN1 (ENSBTAG00000014466) #27	MAN1A2 (ENSBTAG00000003586) #28	TENT5C (ENSBTAG00000046509) #29	ENSBTAG00000051931	GDAP2 (ENSBTAG00000016387) #30	WDR3 (ENSBTAG00000019937) #31	SPAG17 (ENSBTAG00000001080) #32	ENSBTAG00000048491
American bison	MODERN SPECIES	3366	DENND2C (ENSBBBG00000002113)	AMPD1 (ENSBBBG00000011610) #7	NRAS (ENSBBBG00000011637) #8	ENSBBBG00000011846 #9	SIKE1 (ENSBBBG00000011890) #11	ENSBBBG00000011898	SYCP1 (ENSBBBG00000012065) #13	TSHB (ENSBBBG00000012103) #14	TSPAN2 (ENSBBBG00000012145) #15	NGF (ENSBBBG00000012158) #16	VANGL1 (ENSBBBG00000012189) #17	CASQ2 (ENSBBBG00000012205) #18	ENSBBBG00000012213	SLC22A15 (ENSBBBG00000012276) #20	MAB21L3 (ENSBBBG00000002319) #21	ATP1A1 (ENSBBBG00000012376) #22	ENSBBBG00000012393	IGSF3 (ENSBBBG00000012453) #23	CD2 (ENSBBBG00000012471)	PTGFRN (ENSBBBG00000002392) #24	CD101 (ENSBBBG00000012530)	TTF2 (ENSBBBG00000012568) #25	TRIM45 (ENSBBBG00000012597) #26	VTCN1 (ENSBBBG00000002434) #27	MAN1A2 (ENSBBBG00000012766) #28	TENT5C (ENSBBBG00000007449) #29	GDAP2 (ENSBBBG00000002478) #30	WDR3 (ENSBBBG00000012825) #31	SPAG17 (ENSBBBG00000001749) #32	ENSBBBG00000012856	H2AC25 (ENSBBBG00000002529)
Siberian musk deer	MODERN SPECIES	98	ENSMMSG00000011497	DENND2C (ENSMMSG00000011535)	AMPD1 (ENSMMSG00000011611) #7	NRAS (ENSMMSG00000011786) #8	CSDE1 (ENSMMSG00000011841) #9	SIKE1 (ENSMMSG00000012115) #11	SYCP1 (ENSMMSG00000012181) #13	TSHB (ENSMMSG00000012517) #14	TSPAN2 (ENSMMSG00000012545) #15	NGF (ENSMMSG00000012583) #16	VANGL1 (ENSMMSG00000012598) #17	CASQ2 (ENSMMSG00000012652) #18	NHLH2 (ENSMMSG00000012682) #19	SLC22A15 (ENSMMSG00000012704) #20	MAB21L3 (ENSMMSG00000012783) #21	ATP1A1 (ENSMMSG00000012825) #22	ENSMMSG00000012961	IGSF3 (ENSMMSG00000012976) #23	ENSMMSG00000013017	PTGFRN (ENSMMSG00000013024) #24	CD101 (ENSMMSG00000013054)	TTF2 (ENSMMSG00000013101) #25	TRIM45 (ENSMMSG00000013142) #26	VTCN1 (ENSMMSG00000013168) #27	MAN1A2 (ENSMMSG00000013222) #28	ENSMMSG00000013271	TENT5C (ENSMMSG00000013288) #29	GDAP2 (ENSMMSG00000013305) #30	WDR3 (ENSMMSG00000013356) #31	SPAG17 (ENSMMSG00000013419) #32	ENSMMSG00000013577
Yarkand deer	MODERN SPECIES	12	AMPD1 (ENSCHYG00000016598) #7	NRAS (ENSCHYG00000016503) #8	CSDE1 (ENSCHYG00000016050) #9	SIKE1 (ENSCHYG00000015766) #11	ENSCHYG00000015651	SYCP1 (ENSCHYG00000015396) #13	TSHB (ENSCHYG00000015320) #14	TSPAN2 (ENSCHYG00000015066) #15	NGF (ENSCHYG00000014981) #16	VANGL1 (ENSCHYG00000014894) #17	CASQ2 (ENSCHYG00000014814) #18	NHLH2 (ENSCHYG00000014773) #19	ENSCHYG00000014737	ENSCHYG00000014605 #20	MAB21L3 (ENSCHYG00000014551) #21	ATP1A1 (ENSCHYG00000013765) #22	ENSCHYG00000013650	IGSF3 (ENSCHYG00000013489) #23	CD2 (ENSCHYG00000013421)	PTGFRN (ENSCHYG00000013321) #24	CD101 (ENSCHYG00000013230)	TTF2 (ENSCHYG00000013086) #25	TRIM45 (ENSCHYG00000013005) #26	VTCN1 (ENSCHYG00000012876) #27	ENSCHYG00000012828	MAN1A2 (ENSCHYG00000012603) #28	TENT5C (ENSCHYG00000012566) #29	GDAP2 (ENSCHYG00000012378) #30	WDR3 (ENSCHYG00000012236) #31	SPAG17 (ENSCHYG00000012111) #32	TBX15 (ENSCHYG00000011911) #34
Camelidae	ANCESTRAL SPECIES	29	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000164746	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34
Arabian camel	MODERN SPECIES	35	BCAS2 (ENSCDRG00005005135)	DENND2C (ENSCDRG00005005062)	AMPD1 (ENSCDRG00005004958) #7	NRAS (ENSCDRG00005004935) #8	ENSCDRG00005004604 #9	SIKE1 (ENSCDRG00005004534) #11	ENSCDRG00005004390 #12	SYCP1 (ENSCDRG00005003944) #13	TSHB (ENSCDRG00005003878) #14	TSPAN2 (ENSCDRG00005003772) #15	NGF (ENSCDRG00005003718) #16	VANGL1 (ENSCDRG00005003686) #17	CASQ2 (ENSCDRG00005003648) #18	SLC22A15 (ENSCDRG00005003542) #20	MAB21L3 (ENSCDRG00005003501) #21	ATP1A1 (ENSCDRG00005003442) #22	ENSCDRG00005003393	IGSF3 (ENSCDRG00005003359) #23	CD2 (ENSCDRG00005003335)	PTGFRN (ENSCDRG00005003307) #24	CD101 (ENSCDRG00005003285)	ENSCDRG00005003266	TRIM45 (ENSCDRG00005003250) #26	VTCN1 (ENSCDRG00005003199) #27	MAN1A2 (ENSCDRG00005003168) #28	TENT5C (ENSCDRG00005003158) #29	GDAP2 (ENSCDRG00005003149) #30	WDR3 (ENSCDRG00005003128) #31	SPAG17 (ENSCDRG00005003031) #32	ENSCDRG00005003000	TBX15 (ENSCDRG00005002975) #34
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT01100000263543.a.j	ENSGT00940000159013 #34
Carnivora	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000154158.l.c.a	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT01100000263543.a.j	ENSGT00940000159013 #34
Caniformia	ANCESTRAL SPECIES	2	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947.g.b #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000154158.l.c.a	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00950000185047	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00950000185829	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947.g.b #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00950000185047	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00950000185829	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32
Ursidae	ANCESTRAL SPECIES	32	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947.g.b #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000154158.l.c.a	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000164746	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00950000185047	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00950000185829	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32
Ursus	ANCESTRAL SPECIES	107	ENSGT00940000158947.g.b #8	ENSGT00390000016950.k.a #9	ENSGT00390000016950.l #9	ENSGT00390000018003.a #11	ENSGT00940000154158.l.c.a	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000164746	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00950000185047	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT01100000263543.a.j.h.b
American black bear	MODERN SPECIES	7516																ATP1A1 (ENSUAMG00000004877) #22
Polar bear	MODERN SPECIES	209	AMPD1 (ENSUMAG00000011730) #7	NRAS (ENSUMAG00000011722) #8	ENSUMAG00000011714 #9	ENSUMAG00000011713 #9	SIKE1 (ENSUMAG00000011701) #11	ENSUMAG00000011697	ENSUMAG00000011659 #12	SYCP1 (ENSUMAG00000011531) #13	TSHB (ENSUMAG00000011510) #14	TSPAN2 (ENSUMAG00000011490) #15	NGF (ENSUMAG00000011483) #16	VANGL1 (ENSUMAG00000011478) #17	CASQ2 (ENSUMAG00000011472) #18	SLC22A15 (ENSUMAG00000011378) #20	MAB21L3 (ENSUMAG00000011357) #21	ATP1A1 (ENSUMAG00000011338) #22	ENSUMAG00000011330
Giant Panda	MODERN SPECIES	11	ENSAMEG00000028734	NRAS (ENSAMEG00000017134) #8	CSDE1 (ENSAMEG00000017129) #9	SIKE1 (ENSAMEG00000017123) #11	ENSAMEG00000026022	ENSAMEG00000017106 #12	SYCP1 (ENSAMEG00000017087) #13	TSHB (ENSAMEG00000010929) #14	ENSAMEG00000010910 #15	NGF (ENSAMEG00000030308) #16	VANGL1 (ENSAMEG00000010898) #17	CASQ2 (ENSAMEG00000029848) #18	NHLH2 (ENSAMEG00000010851) #19	SLC22A15 (ENSAMEG00000026074) #20	MAB21L3 (ENSAMEG00000005068) #21	ATP1A1 (ENSAMEG00000005071) #22	ENSAMEG00000005165	IGSF3 (ENSAMEG00000005171) #23	ENSAMEG00000005177	PTGFRN (ENSAMEG00000005188) #24	CD101 (ENSAMEG00000005212)	ENSAMEG00000005220	TRIM45 (ENSAMEG00000005240) #26	VTCN1 (ENSAMEG00000005256) #27	ENSAMEG00000029843	MAN1A2 (ENSAMEG00000004421) #28	TENT5C (ENSAMEG00000019061) #29	ENSAMEG00000024849	GDAP2 (ENSAMEG00000004394) #30	WDR3 (ENSAMEG00000004339) #31	SPAG17 (ENSAMEG00000004302) #32
Mustelinae	ANCESTRAL SPECIES	47	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947.g.b #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000154158.l.c.a	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
American mink	MODERN SPECIES	111	C16orf90 (ENSNVIG00000023393)	CLUAP1 (ENSNVIG00000023394)	NLRC3 (ENSNVIG00000023403)	SLX4 (ENSNVIG00000023409)	TRAP1 (ENSNVIG00000023431)	DNASE1 (ENSNVIG00000023448)	CREBBP (ENSNVIG00000023450)	ADCY9 (ENSNVIG00000023463)	SRL (ENSNVIG00000023467)	TFAP4 (ENSNVIG00000023470)	VANGL1 (ENSNVIG00000023481) #17	CASQ2 (ENSNVIG00000000050) #18	NHLH2 (ENSNVIG00000000105) #19	SLC22A15 (ENSNVIG00000000113) #20	MAB21L3 (ENSNVIG00000000128) #21	ATP1A1 (ENSNVIG00000000157) #22	ENSNVIG00000000193	IGSF3 (ENSNVIG00000000200) #23	CD2 (ENSNVIG00000000214)	PTGFRN (ENSNVIG00000000230) #24	CD101 (ENSNVIG00000000251)	TTF2 (ENSNVIG00000000301) #25	TRI45 (ENSNVIG00000000318) #26	VTCN1 (ENSNVIG00000000327) #27	ENSNVIG00000000362	MAN1A2 (ENSNVIG00000000375) #28	TENT5C (ENSNVIG00000000384) #29
Ferret	MODERN SPECIES	323		ENSMPUG00000001750	ENSMPUG00000001742 #13	ENSMPUG00000001740 #13	ENSMPUG00000001725	TSHB (ENSMPUG00000001722) #14	TSPAN2 (ENSMPUG00000001674) #15	NGF (ENSMPUG00000019389) #16	VANGL1 (ENSMPUG00000001670) #17	CASQ2 (ENSMPUG00000001664) #18	NHLH2 (ENSMPUG00000019387) #19	ENSMPUG00000001661	SLC22A15 (ENSMPUG00000001657) #20	ENSMPUG00000001652	MAB21L3 (ENSMPUG00000001644) #21	ATP1A1 (ENSMPUG00000001638) #22	ENSMPUG00000001632	IGSF3 (ENSMPUG00000001629) #23	CD2 (ENSMPUG00000001627)	PTGFRN (ENSMPUG00000001624) #24	CD101 (ENSMPUG00000001621)	ENSMPUG00000001606	TRIM45 (ENSMPUG00000001600) #26	VTCN1 (ENSMPUG00000001593) #27	MAN1A2 (ENSMPUG00000001585) #28	TENT5C (ENSMPUG00000001581) #29	GDAP2 (ENSMPUG00000001575) #30	WDR3 (ENSMPUG00000001565) #31	SPAG17 (ENSMPUG00000001553) #32	TBX15 (ENSMPUG00000001549) #34	WARS2 (ENSMPUG00000001541) #35
Canidae	ANCESTRAL SPECIES	25	ENSGT00940000158947.g.a #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000154158.l.c.a	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00390000013931.a.a.a.a	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000164746	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00950000185047.a.a	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00950000185829	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000154158.l.c.a	ENSGT00950000182967.a.a.a.a.a.a.c.b.a.a	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00390000013931.a.a.a.a.b	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000169805	ENSGT00940000154334.k #26	ENSGT00950000183010.a.a.a.b.a.a.a.a.a	ENSGT00940000157300 #27	ENSGT00950000185047.a.a	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00950000185829	ENSGT00940000156336 #30	ENSGT00940000153859.a #31
Dingo	MODERN SPECIES	223	CSDE1 (ENSCAFG00020000481) #9	SIKE1 (ENSCAFG00020000472) #11	ENSCAFG00020000466	ENSCAFG00020000446	ENSCAFG00020000163 #12	ENSCAFG00020021008	SYCP1 (ENSCAFG00020020995) #13	TSHB (ENSCAFG00020020987) #14	TSPAN2 (ENSCAFG00020020982) #15	NGF (ENSCAFG00020020970) #16	VANGL1 (ENSCAFG00020020963) #17	CASQ2 (ENSCAFG00020020924) #18	NHLH2 (ENSCAFG00020020915) #19	SLC22A15 (ENSCAFG00020020878) #20	MAB21L3 (ENSCAFG00020020870) #21	ATP1A1 (ENSCAFG00020020858) #22	ENSCAFG00020020844	IGSF3 (ENSCAFG00020020808) #23	CD2 (ENSCAFG00020020793)	ENSCAFG00020020788	PTGFRN (ENSCAFG00020020784) #24	CD101 (ENSCAFG00020020782)	ENSCAFG00020020772	TRIM45 (ENSCAFG00020020769) #26	ENSCAFG00020020767	VTCN1 (ENSCAFG00020020764) #27	ENSCAFG00020020761	MAN1A2 (ENSCAFG00020020664) #28	TENT5C (ENSCAFG00020020652) #29	ENSCAFG00020020651	GDAP2 (ENSCAFG00020020644) #30
Dog	MODERN SPECIES	8	ENSCAFG00845027157	ENSCAFG00845027184	ENSCAFG00845027218 #12	ENSCAFG00845027397 #13	ENSCAFG00845027680	TSHB (ENSCAFG00845027709) #14	TSPAN2 (ENSCAFG00845027766) #15	ENSCAFG00845027829	NGF (ENSCAFG00845027859) #16	VANGL1 (ENSCAFG00845027910) #17	CASQ2 (ENSCAFG00845028062) #18	ENSCAFG00845028114 #19	SLC22A15 (ENSCAFG00845028198) #20	MAB21L3 (ENSCAFG00845028265) #21	ENSCAFG00845028320	ATP1A1 (ENSCAFG00845028456) #22	ENSCAFG00845028795	IGSF3 (ENSCAFG00845028936) #23	CD2 (ENSCAFG00845028984)	PTGFRN (ENSCAFG00845029002) #24	CD101 (ENSCAFG00845029071)	ENSCAFG00845029143	TRIM45 (ENSCAFG00845029248) #26	ENSCAFG00845029291	VTCN1 (ENSCAFG00845029358) #27	ENSCAFG00845029463	MAN1A2 (ENSCAFG00845029509) #28	TENT5C (ENSCAFG00845005783) #29	GDAP2 (ENSCAFG00845005877) #30	WDR3 (ENSCAFG00845005942) #31	SPAG17 (ENSCAFG00845005984) #32
Red fox	MODERN SPECIES	16	ENSVVUG00000009910	ENSVVUG00000009922 #12	SYCP1 (ENSVVUG00000009950) #13	ENSVVUG00000010223	ENSVVUG00000010227	TSHB (ENSVVUG00000010234) #14	TSPAN2 (ENSVVUG00000010237) #15	VANGL1 (ENSVVUG00000010259) #17	CASQ2 (ENSVVUG00000010295) #18	NHLH2 (ENSVVUG00000010299) #19	ENSVVUG00000010302 #20	ENSVVUG00000010311	ENSVVUG00000010324 #20	MAB21L3 (ENSVVUG00000010333) #21	ENSVVUG00000010336	ATP1A1 (ENSVVUG00000010340) #22	CD58 (ENSVVUG00000010356)	IGSF3 (ENSVVUG00000010362) #23	CD2 (ENSVVUG00000010381)	PTGFRN (ENSVVUG00000010390) #24	CD101 (ENSVVUG00000010401)	TTF2 (ENSVVUG00000010407)	TRIM45 (ENSVVUG00000010421) #26	VTCN1 (ENSVVUG00000010432) #27	ENSVVUG00000010433	MAN1A2 (ENSVVUG00000010442) #28	TENT5C (ENSVVUG00000010460) #29	ENSVVUG00000010463	GDAP2 (ENSVVUG00000010473) #30	WDR3 (ENSVVUG00000010629) #31	SPAG17 (ENSVVUG00000010690) #32
Felidae	ANCESTRAL SPECIES	10	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947.e #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000154158.l.c.a	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Panthera	ANCESTRAL SPECIES	4	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947.e #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000154158.l.c.a	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000164746	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Panthera_a	ANCESTRAL SPECIES	11	ENSGT00940000158947.e #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000154158.l.c.a	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00950000183010.a.a.a.b.a.a.b.a.b.b.a	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000164746	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
lion	MODERN SPECIES	8	NRAS (ENSPLOG00000016315) #8	CSDE1 (ENSPLOG00000015680) #9	SIKE1 (ENSPLOG00000015473) #11	ENSPLOG00000015461	ENSPLOG00000015234 #12	SYCP1 (ENSPLOG00000014657) #13	TSHB (ENSPLOG00000014568) #14	TSPAN2 (ENSPLOG00000014519) #15	ENSPLOG00000014415	NGF (ENSPLOG00000014389) #16	VANGL1 (ENSPLOG00000014377) #17	CASQ2 (ENSPLOG00000014262) #18	NHLH2 (ENSPLOG00000014240) #19	SLC22A15 (ENSPLOG00000014089) #20	MAB21L3 (ENSPLOG00000014017) #21	ATP1A1 (ENSPLOG00000013723) #22	ENSPLOG00000013611	IGSF3 (ENSPLOG00000013549) #23	CD2 (ENSPLOG00000013510)	PTGFRN (ENSPLOG00000013463) #24	CD101 (ENSPLOG00000013429)	ENSPLOG00000013203	TRIM45 (ENSPLOG00000013060) #26	VTCN1 (ENSPLOG00000012889) #27	MAN1A2 (ENSPLOG00000012755) #28	TENT5C (ENSPLOG00000012735) #29	ENSPLOG00000012701	GDAP2 (ENSPLOG00000012658) #30	WDR3 (ENSPLOG00000012483) #31	SPAG17 (ENSPLOG00000012093) #32	TBX15 (ENSPLOG00000011860) #34
leopard	MODERN SPECIES	31	ENSPPRG00000007102 #8	CSDE1 (ENSPPRG00000006747) #9	SIKE1 (ENSPPRG00000001473) #11	ENSPPRG00000001280	ENSPPRG00000000888 #12	SYCP1 (ENSPPRG00000023786) #13	TSHB (ENSPPRG00000012835) #14	TSPAN2 (ENSPPRG00000012267) #15	ENSPPRG00000016776	NGF (ENSPPRG00000016689) #16	VANGL1 (ENSPPRG00000010871) #17	CASQ2 (ENSPPRG00000009697) #18	NHLH2 (ENSPPRG00000016591) #19	SLC22A15 (ENSPPRG00000008983) #20	MAB21L3 (ENSPPRG00000008518) #21	ATP1A1 (ENSPPRG00000008177) #22	IGSF3 (ENSPPRG00000004364) #23	CD2 (ENSPPRG00000003530)	PTGFRN (ENSPPRG00000003305) #24	CD101 (ENSPPRG00000003135)	ENSPPRG00000002352	TRIM45 (ENSPPRG00000001987) #26	VTCN1 (ENSPPRG00000001120) #27	MAN1A2 (ENSPPRG00000000605) #28	TENT5C (ENSPPRG00000016270) #29	GDAP2 (ENSPPRG00000000210) #30	WDR3 (ENSPPRG00000022972) #31	SPAG17 (ENSPPRG00000023948) #32	TBX15 (ENSPPRG00000020309) #34	WARS2 (ENSPPRG00000017754) #35	HAO2 (ENSPPRG00000016364)
Tiger	MODERN SPECIES	20												VANGL1 (ENSPTIG00000015471) #17	CASQ2 (ENSPTIG00000014576) #18	SLC22A15 (ENSPTIG00000013213) #20	MAB21L3 (ENSPTIG00000011945) #21	ATP1A1 (ENSPTIG00000020868) #22	IGSF3 (ENSPTIG00000018398) #23	SDK2 (ENSPTIG00000015074)	CPSF4L (ENSPTIG00000012676)	C17orf80 (ENSPTIG00000008684)	ENSPTIG00000006569	COG1 (ENSPTIG00000005027)	SSTR2 (ENSPTIG00000006667)	SLC39A11 (ENSPTIG00000000090)	ENSPTIG00000006657	ENSPTIG00000019658	KCNJ2 (ENSPTIG00000006640)	KCNJ16 (ENSPTIG00000006633)	MAP2K6 (ENSPTIG00000017793)	ABCA5 (ENSPTIG00000016901)	ABCA10 (ENSPTIG00000013922)
Cat	MODERN SPECIES	239	AMPD1 (ENSFCAG00000010509) #7	NRAS (ENSFCAG00000037994) #8	CSDE1 (ENSFCAG00000029266) #9	SIKE1 (ENSFCAG00000031592) #11	ENSFCAG00000041311	ENSFCAG00000028538 #12	SYCP1 (ENSFCAG00000023028) #13	TSHB (ENSFCAG00000010405) #14	TSPAN2 (ENSFCAG00000029385) #15	NGF (ENSFCAG00000045820) #16	VANGL1 (ENSFCAG00000010493) #17	CASQ2 (ENSFCAG00000025977) #18	NHLH2 (ENSFCAG00000028313) #19	SLC22A15 (ENSFCAG00000022423) #20	MAB21L3 (ENSFCAG00000031670) #21	ATP1A1 (ENSFCAG00000013378) #22	CD58 (ENSFCAG00000025590)	IGSF3 (ENSFCAG00000011343) #23	CD2 (ENSFCAG00000001976)	PTGFRN (ENSFCAG00000001977) #24	ENSFCAG00000051359	CD101 (ENSFCAG00000001979)	TTF2 (ENSFCAG00000001981) #25	TRIM45 (ENSFCAG00000005204) #26	VTCN1 (ENSFCAG00000009689) #27	MAN1A2 (ENSFCAG00000019000) #28	TENT5C (ENSFCAG00000022444) #29	GDAP2 (ENSFCAG00000003468) #30	WDR3 (ENSFCAG00000003469) #31	ENSFCAG00000011531 #32	TBX15 (ENSFCAG00000043861) #34
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Equus	ANCESTRAL SPECIES	3	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000165376	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Donkey	MODERN SPECIES	7	DENND2C (ENSEASG00005006273)	AMPD1 (ENSEASG00005006275) #7	NRAS (ENSEASG00005006279) #8	CSDE1 (ENSEASG00005006284) #9	SIKE1 (ENSEASG00005034759) #11	ENSEASG00005006296 #12	SYCP1 (ENSEASG00005006304) #13	TSHB (ENSEASG00005006325) #14	TSPAN2 (ENSEASG00005006328) #15	NGF (ENSEASG00005006332) #16	VANGL1 (ENSEASG00005006335) #17	CASQ2 (ENSEASG00005006338) #18	NHLH2 (ENSEASG00005031693) #19	SLC22A15 (ENSEASG00005006345) #20	MAB21L3 (ENSEASG00005006347) #21	ATP1A1 (ENSEASG00005006353) #22	ENSEASG00005006357	IGSF3 (ENSEASG00005006358) #23	CD2 (ENSEASG00005006361)	PTGFRN (ENSEASG00005006364) #24	CD101 (ENSEASG00005006367)	ENSEASG00005006374	TRIM45 (ENSEASG00005006386) #26	VTCN1 (ENSEASG00005006388) #27	MAN1A2 (ENSEASG00005006389) #28	TENT5C (ENSEASG00005033293) #29	GDAP2 (ENSEASG00005006392) #30	WDR3 (ENSEASG00005006393) #31	SPAG17 (ENSEASG00005024790) #32	TBX15 (ENSEASG00005006401) #34	WARS2 (ENSEASG00005024683) #35
Horse	MODERN SPECIES	26	DENND2C (ENSECAG00000019594)	AMPD1 (ENSECAG00000014907) #7	NRAS (ENSECAG00000013942) #8	CSDE1 (ENSECAG00000020885) #9	SIKE1 (ENSECAG00000019395) #11	ENSECAG00000015617 #12	SYCP1 (ENSECAG00000013010) #13	TSHB (ENSECAG00000045218) #14	TSPAN2 (ENSECAG00000010966) #15	NGF (ENSECAG00000010553) #16	VANGL1 (ENSECAG00000008137) #17	CASQ2 (ENSECAG00000021854) #18	NHLH2 (ENSECAG00000030954) #19	SLC22A15 (ENSECAG00000020117) #20	MAB21L3 (ENSECAG00000019090) #21	ATP1A1 (ENSECAG00000024623) #22	ENSECAG00000056436	ENSECAG00000057106	CD2 (ENSECAG00000019437)	IGSF3 (ENSECAG00000022378) #23	PTGFRN (ENSECAG00000017101) #24	CD101 (ENSECAG00000017048)	TTF2 (ENSECAG00000012474)	TRIM45 (ENSECAG00000010259) #26	VTCN1 (ENSECAG00000008749) #27	MAN1A2 (ENSECAG00000019681) #28	TENT5C (ENSECAG00000019626) #29	GDAP2 (ENSECAG00000014270) #30	WDR3 (ENSECAG00000006575) #31	SPAG17 (ENSECAG00000024156) #32	TBX15 (ENSECAG00000023325) #34
Chiroptera	ANCESTRAL SPECIES	38	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Megabat	MODERN SPECIES	1803																ATP1A1 (ENSPVAG00000006284) #22	ENSPVAG00000006286	IGSF3 (ENSPVAG00000006287) #23	ENSPVAG00000006289	CD2 (ENSPVAG00000006290)
Microchiroptera	ANCESTRAL SPECIES	35	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Greater horseshoe bat	MODERN SPECIES	14	DENND2C (ENSRFEG00010015796)	AMPD1 (ENSRFEG00010015922) #7	NRAS (ENSRFEG00010015972) #8	CSDE1 (ENSRFEG00010016045) #9	SIKE1 (ENSRFEG00010016146) #11	ENSRFEG00010016255 #12	SYCP1 (ENSRFEG00010016297) #13	TSHB (ENSRFEG00010017176) #14	TSPAN2 (ENSRFEG00010017235) #15	NGF (ENSRFEG00010017324) #16	VANGL1 (ENSRFEG00010017347) #17	CASQ2 (ENSRFEG00010017384) #18	NHLH2 (ENSRFEG00010017414) #19	SLC22A15 (ENSRFEG00010017434) #20	MAB21L3 (ENSRFEG00010017519) #21	ATP1A1 (ENSRFEG00010017578) #22	ENSRFEG00010017926	IGSF3 (ENSRFEG00010017979) #23	CD2 (ENSRFEG00010018050)	PTGFRN (ENSRFEG00010018081) #24	CD101 (ENSRFEG00010018120)	ENSRFEG00010018150	ENSRFEG00010018175	TRIM45 (ENSRFEG00010018200) #26	VTCN1 (ENSRFEG00010018302) #27	MAN1A2 (ENSRFEG00010018506) #28	TENT5C (ENSRFEG00010018543) #29	GDAP2 (ENSRFEG00010018562) #30	WDR3 (ENSRFEG00010018610) #31	SPAG17 (ENSRFEG00010018691) #32	TBX15 (ENSRFEG00010019084) #34
Microbat	MODERN SPECIES	1140																ATP1A1 (ENSMLUG00000005048) #22	ENSMLUG00000022981	IGSF3 (ENSMLUG00000003182) #23	ENSMLUG00000003193	PTGFRN (ENSMLUG00000007160) #24	CD101 (ENSMLUG00000007176)	TTF2 (ENSMLUG00000013908) #25	TRIM45 (ENSMLUG00000013923) #26	VTCN1 (ENSMLUG00000013927) #27	MAN1A2 (ENSMLUG00000014231) #28	TENT5C (ENSMLUG00000014236) #29	GDAP2 (ENSMLUG00000003494) #30	WDR3 (ENSMLUG00000003500) #31	PDE4DIP (ENSMLUG00000012437)	SEC22B (ENSMLUG00000025411)	NOTCH2 (ENSMLUG00000003023)
Atlantogenata	ANCESTRAL SPECIES	26	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Xenarthra	ANCESTRAL SPECIES	1698															ENSGT01050000244827.B #21	ENSGT00940000154840.b #22
Sloth	MODERN SPECIES	4964																ATP1A1 (ENSCHOG00000007807) #22
Armadillo	MODERN SPECIES	3822													SLC22A15 (ENSDNOG00000016384) #20	ENSDNOG00000045952	MAB21L3 (ENSDNOG00000016388) #21	ATP1A1 (ENSDNOG00000010484) #22
Afrotheria	ANCESTRAL SPECIES	31	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Afrotheria_a	ANCESTRAL SPECIES	31	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947 #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000155177.b #23	ENSGT01030000234540.E	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35	ENSGT00390000018717.b.a.b
Elephant	MODERN SPECIES	26	AMPD1 (ENSLAFG00000007144) #7	NRAS (ENSLAFG00000020706) #8	CSDE1 (ENSLAFG00000007150) #9	SIKE1 (ENSLAFG00000010502) #11	ENSLAFG00000028744 #12	ENSLAFG00000030508	TSHB (ENSLAFG00000030671) #14	TSPAN2 (ENSLAFG00000006453) #15	NGF (ENSLAFG00000028282) #16	ENSLAFG00000022285	VANGL1 (ENSLAFG00000003272) #17	CASQ2 (ENSLAFG00000003274) #18	NHLH2 (ENSLAFG00000007456) #19	SLC22A15 (ENSLAFG00000004144) #20	MAB21L3 (ENSLAFG00000023352) #21	ATP1A1 (ENSLAFG00000015690) #22	IGSF3 (ENSLAFG00000000958) #23	CD2 (ENSLAFG00000014389)	PTGFRN (ENSLAFG00000005517) #24	CD101 (ENSLAFG00000005521)	ENSLAFG00000006808 #25	TRIM45 (ENSLAFG00000005156) #26	VTCN1 (ENSLAFG00000006818) #27	MAN1A2 (ENSLAFG00000017263) #28	TENT5C (ENSLAFG00000014696) #29	GDAP2 (ENSLAFG00000012098) #30	WDR3 (ENSLAFG00000012108) #31	SPAG17 (ENSLAFG00000012115) #32	TBX15 (ENSLAFG00000018452) #34	WARS2 (ENSLAFG00000018455) #35	HAO2 (ENSLAFG00000010622)
Hyrax	MODERN SPECIES	4595																ATP1A1 (ENSPCAG00000000041) #22
Tenrec	MODERN SPECIES	5407															ENSETEG00000007272	ATP1A1 (ENSETEG00000007276) #22
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947.x #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT00960000186961	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Opossum	MODERN SPECIES	1	AMPD1 (ENSMODG00000004578) #7	NRAS (ENSMODG00000004590) #8	CSDE1 (ENSMODG00000004685) #9	SIKE1 (ENSMODG00000004700) #11	ENSMODG00000004721 #12	SYCP1 (ENSMODG00000004800) #13	TSHB (ENSMODG00000004806) #14	TSPAN2 (ENSMODG00000004828) #15	ENSMODG00000004846	NGF (ENSMODG00000004863) #16	ENSMODG00000023229 ##17	CASQ2 (ENSMODG00000004914) #18	NHLH2 (ENSMODG00000023228) #19	SLC22A15 (ENSMODG00000004931) #20	MAB21L3 (ENSMODG00000004947) #21	ATP1A1 (ENSMODG00000005035) #22	ENSMODG00000039584	IGSF3 (ENSMODG00000005063) #23	ENSMODG00000005074	PTGFRN (ENSMODG00000005096) #24	CD101 (ENSMODG00000005103)	TTF2 (ENSMODG00000005145) #25	TRIM45 (ENSMODG00000005160) #26	VTCN1 (ENSMODG00000047962) #27	MAN1A2 (ENSMODG00000005193) #28	TENT5C (ENSMODG00000023227) #29	GDAP2 (ENSMODG00000005215) #30	ENSMODG00000042799	ENSMODG00000028610	WDR3 (ENSMODG00000005243) #31	SPAG17 (ENSMODG00000005306) #32
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947.x #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT00960000186961	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Tasmanian devil	MODERN SPECIES	3	CSDE1 (ENSSHAG00000009831) #9	AMPD1 (ENSSHAG00000009444) #7	SIKE1 (ENSSHAG00000026566) #11	ENSSHAG00000010518 #12	SYCP1 (ENSSHAG00000010670) #13	TSHB (ENSSHAG00000011393) #14	TSPAN2 (ENSSHAG00000032135) #15	ENSSHAG00000011855	NGF (ENSSHAG00000013026) #16	VANGL1 (ENSSHAG00000014752) #17	CASQ2 (ENSSHAG00000014881) #18	NHLH2 (ENSSHAG00000015472) #19	ENSSHAG00000026266	SLC22A15 (ENSSHAG00000015912) #20	MAB21L3 (ENSSHAG00000022094) #21	ATP1A1 (ENSSHAG00000016979) #22	ENSSHAG00000017292	IGSF3 (ENSSHAG00000027689) #23	ENSSHAG00000017759	PTGFRN (ENSSHAG00000018051) #24	CD101 (ENSSHAG00000018141)	TTF2 (ENSSHAG00000018195) #25	TRIM45 (ENSSHAG00000018250) #26	VTCN1 (ENSSHAG00000018283) #27	MAN1A2 (ENSSHAG00000006188) #28	TENT5C (ENSSHAG00000024267) #29	GDAP2 (ENSSHAG00000003812) #30	WDR3 (ENSSHAG00000005169) #31	SPAG17 (ENSSHAG00000005600) #32	ENSSHAG00000031021	TBX15 (ENSSHAG00000012785) #34
Diprotodontia	ANCESTRAL SPECIES	5	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947.x #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT00960000186961	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
Wallaby	DUPLICATION
Wallaby	MODERN SPECIES	276																ENSMEUG00000015137 #22
Wallaby	MODERN SPECIES	6778																ENSMEUG00000013265 #22
Diprotodontia_a	ANCESTRAL SPECIES	6	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a #7	ENSGT00940000158947.x #8	ENSGT00390000016950 #9	ENSGT00390000018003.a #11	ENSGT00940000163318 #12	ENSGT00390000003368 #13	ENSGT00940000158152 #14	ENSGT00940000157504 #15	ENSGT00390000007725.A.b #16	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000155177.b #23	ENSGT00960000186961	ENSGT00940000158367 #24	ENSGT00940000161722	ENSGT00940000162718 #25	ENSGT00940000154334.k #26	ENSGT00940000157300 #27	ENSGT00940000157498 #28	ENSGT00940000158856 #29	ENSGT00940000156336 #30	ENSGT00940000153859.a #31	ENSGT00390000013693 #32	ENSGT00940000159013 #34	ENSGT00940000153724.A #35
koala	MODERN SPECIES	4	AMPD1 (ENSPCIG00000022674) #7	NRAS (ENSPCIG00000022594) #8	CSDE1 (ENSPCIG00000022587) #9	SIKE1 (ENSPCIG00000022581) #11	ENSPCIG00000022577 #12	SYCP1 (ENSPCIG00000022572) #13	TSHB (ENSPCIG00000022570) #14	TSPAN2 (ENSPCIG00000022568) #15	ENSPCIG00000022566	NGF (ENSPCIG00000028939) #16	VANGL1 (ENSPCIG00000001310) #17	CASQ2 (ENSPCIG00000001270) #18	NHLH2 (ENSPCIG00000031517) #19	SLC22A15 (ENSPCIG00000033801) #20	MAB21L3 (ENSPCIG00000010827) #21	ATP1A1 (ENSPCIG00000004151) #22	ENSPCIG00000005860	IGSF3 (ENSPCIG00000005858) #23	ENSPCIG00000031241	ENSPCIG00000033767	PTGFRN (ENSPCIG00000003461) #24	CD101 (ENSPCIG00000003473)	TTF2 (ENSPCIG00000003483) #25	TRIM45 (ENSPCIG00000003500) #26	VTCN1 (ENSPCIG00000003514) #27	MAN1A2 (ENSPCIG00000023762) #28	TENT5C (ENSPCIG00000009669) #29	GDAP2 (ENSPCIG00000000919) #30	WDR3 (ENSPCIG00000000938) #31	SPAG17 (ENSPCIG00000000977) #32	ENSPCIG00000037477
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1021	CSDE1 (ENSVURG00010009236) #9	SIKE1 (ENSVURG00010009209) #11	ENSVURG00010008750 #12	ENSVURG00010008707 #13	TSHB (ENSVURG00010008697) #14	TSPAN2 (ENSVURG00010008617) #15	ENSVURG00010008604	NGF (ENSVURG00010008601) #16	ENSVURG00010008585	VANGL1 (ENSVURG00010008571) #17	CASQ2 (ENSVURG00010008538) #18	NHLH2 (ENSVURG00010008530) #19	SLC22A15 (ENSVURG00010008519) #20	MAB21L3 (ENSVURG00010008509) #21	ENSVURG00010008506	ATP1A1 (ENSVURG00010008458) #22	ENSVURG00010008439	IGSF3 (ENSVURG00010008429) #23	ENSVURG00010008419	PTGFRN (ENSVURG00010008404) #24	CD101 (ENSVURG00010008389)	TTF2 (ENSVURG00010008350) #25	TRIM45 (ENSVURG00010008336) #26	VTCN1 (ENSVURG00010008325) #27	MAN1A2 (ENSVURG00010008291) #28	TENT5C (ENSVURG00010008285) #29	GDAP2 (ENSVURG00010008266) #30	WDR3 (ENSVURG00010008236) #31	SPAG17 (ENSVURG00010008196) #32	TBX15 (ENSVURG00010008181) #34	WARS2 (ENSVURG00010008172) #35
Common wonbat	MODERN SPECIES	1070	CRP (ENSVURG00010002451)	DUSP23 (ENSVURG00010002433)	ENSVURG00010002392	SLAMF8 (ENSVURG00010002381)	VSIG8 (ENSVURG00010002373)	CFAP45 (ENSVURG00010002351)	TAGLN2 (ENSVURG00010002337)	IGSF9 (ENSVURG00010002314)	ENSVURG00010002305	PIGM (ENSVURG00010002300)	KCNJ10 (ENSVURG00010002293)	KCNJ9 (ENSVURG00010002274)	IGSF8 (ENSVURG00010002261)	ATP1A2 (ENSVURG00010002235)	ATP1A4 (ENSVURG00010002214)	ENSVURG00010002197 #22	ENSVURG00010002187 ##18	PEA15 (ENSVURG00010002176)	ENSVURG00010002144	ENSVURG00010002119	COPA (ENSVURG00010002074)	NCSTN (ENSVURG00010002039)	NHLH1 (ENSVURG00010002027)	VANGL2 (ENSVURG00010002013) ##17	ENSVURG00010001994	ENSVURG00010001911	ENSVURG00010001856	ENSVURG00010001843	ENSVURG00010001833	ENSVURG00010001826	ENSVURG00010001811
Platypus	MODERN SPECIES	7	GSK3B (ENSOANG00000001670)	ENSOANG00000050472	ENSOANG00000041372	COX17 (ENSOANG00000037632)	ENSOANG00000048908	PLA1A (ENSOANG00000048291)	ENSOANG00000040539	ADPRH (ENSOANG00000037344)	ENSOANG00000050911	POGLUT1 (ENSOANG00000044666)	VANGL1 (ENSOANG00000042017) #17	ENSOANG00000021966 #18	NHLH2 (ENSOANG00000009820) #19	SLC22A15 (ENSOANG00000044054) #20	MAB21L3 (ENSOANG00000002511) #21	ATP1A1 (ENSOANG00000037687) #22	ENSOANG00000040389	ENSOANG00000040078	IGSF3 (ENSOANG00000048085) #23	TMEM39A (ENSOANG00000047837)	ENSOANG00000039096	B4GALT4 (ENSOANG00000044285)	UPK1B (ENSOANG00000049892)	IGSF11 (ENSOANG00000044874)	HSD17B7 (ENSOANG00000048102)	RGS5 (ENSOANG00000044194)	RGS4 (ENSOANG00000046116)	NUF2 (ENSOANG00000045469)	PBX1 (ENSOANG00000006908)	LMX1A (ENSOANG00000043211)	RXRG (ENSOANG00000038239)
Sauria	ANCESTRAL SPECIES	2	ENSGT00940000156392.a	ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b
Lepidosauria	ANCESTRAL SPECIES	96			ENSGT01060000248594.e.b	ENSGT00530000063860.b	ENSGT00390000013549.a.a	ENSGT00950000183130.B	ENSGT00940000153481.C	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b
Episquamata	ANCESTRAL SPECIES	6	ENSGT00730000111328	ENSGT00940000156876	ENSGT01060000248594.e.b	ENSGT00530000063860.b	ENSGT00390000013549.a.a	ENSGT00950000183130.B	ENSGT00940000153481.C	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b	ENSGT00940000158694
Laterata	ANCESTRAL SPECIES	7	ENSGT00730000111328	ENSGT00940000156876	ENSGT01060000248594.e.b	ENSGT00530000063860.b	ENSGT00390000013549.a.a	ENSGT00950000183130.B	ENSGT00940000153481.C	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b	ENSGT00940000158694	ENSGT00940000159540
Argentine black and white tegu	MODERN SPECIES	45	TMEM52B (ENSSMRG00000004442)	GABARAPL1 (ENSSMRG00000004405)	ENSSMRG00000004399	TRPC4 (ENSSMRG00000003736)	POSTN (ENSSMRG00000003693)	SUPT20H (ENSSMRG00000003469)	EXOSC8 (ENSSMRG00000003449)	ALG5 (ENSSMRG00000003444)	TMEM39A (ENSSMRG00000003426)	ENSSMRG00000003418	VANGL1 (ENSSMRG00000003416) #17	CASQ2 (ENSSMRG00000003383) #18	NHLH2 (ENSSMRG00000003377) #19	SLC22A15 (ENSSMRG00000003365) #20	MAB21L3 (ENSSMRG00000003324) #21	ATP1A1 (ENSSMRG00000003307) #22	CYP4F22 (ENSSMRG00000003283)	PGLYRP2 (ENSSMRG00000003278)	LDLR (ENSSMRG00000003274)	ENSSMRG00000003234	KANK2 (ENSSMRG00000003219)	DOCK6 (ENSSMRG00000003144)	ENSSMRG00000003121	RAB3D (ENSSMRG00000003115)	PLPPR2 (ENSSMRG00000003063)	SWSAP1 (ENSSMRG00000003060)	EPOR (ENSSMRG00000003055)	RGL3 (ENSSMRG00000003033)	ENSSMRG00000003025	PRKCSH (ENSSMRG00000003008)	ELAVL3 (ENSSMRG00000003004)
Common wall lizard	MODERN SPECIES	8								CHD1L (ENSPMRG00000023281)	VANGL1 (ENSPMRG00000023286) #17	ENSPMRG00000023288	ENSPMRG00000023291	NHLH2 (ENSPMRG00000016824) #19	SLC22A15 (ENSPMRG00000016829) #20	MAB21L3 (ENSPMRG00000016836) #21	ENSPMRG00000016841	ATP1A1 (ENSPMRG00000016847) #22	PLA1A (ENSPMRG00000016859)	POPDC2 (ENSPMRG00000016870)	COX17 (ENSPMRG00000016875)	CFAP91 (ENSPMRG00000016880)	GSK3B (ENSPMRG00000016914)	GPR156 (ENSPMRG00000016925)	LRRC58 (ENSPMRG00000016931)	ENSPMRG00000016932	FSTL1 (ENSPMRG00000016933)	NDUFB4 (ENSPMRG00000016944)	HGD (ENSPMRG00000016953)	RABL3 (ENSPMRG00000016963)	GTF2E1 (ENSPMRG00000016971)	STXBP5L (ENSPMRG00000016980)	POLQ (ENSPMRG00000017034)
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00730000111328	ENSGT00940000156876	ENSGT01060000248594.e.b	ENSGT00530000063860.b	ENSGT00390000013549.a.a	ENSGT00950000183130.B	ENSGT00940000153481.C	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b	ENSGT00940000158694	ENSGT00940000159540
Elapidae	ANCESTRAL SPECIES	28	ENSGT00940000163990.b.b	ENSGT00670000098076	ENSGT00390000018541	ENSGT00390000010157.b	ENSGT00940000160377	ENSGT00530000063860.b	ENSGT00390000013549.a.a	ENSGT00950000183130.B	ENSGT00940000153481.C	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364.j #20	ENSGT00940000154840.b #22	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024.a	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b.c	ENSGT00940000158694	ENSGT00940000159540
Elapidae_a	ANCESTRAL SPECIES	47	ENSGT00940000163990.b.b	ENSGT00670000098076	ENSGT00390000018541	ENSGT00390000010157.b	ENSGT00940000160377	ENSGT00530000063860.b	ENSGT00390000013549.a.a	ENSGT00950000183130.B	ENSGT00940000153481.C	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402.f	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364.j #20	ENSGT00940000154840.b #22	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024.a	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b.c	ENSGT00940000158694	ENSGT00940000159540
Acanthophiinae	ANCESTRAL SPECIES	44	ENSGT00940000163990.b.b	ENSGT00670000098076	ENSGT00390000018541	ENSGT00390000010157.b	ENSGT00940000160377	ENSGT00530000063860.b	ENSGT00390000013549.a.a	ENSGT00950000183130.B	ENSGT00940000153481.C	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402.f	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364.j #20	ENSGT00940000154840.b #22	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT01040000242649	ENSGT00390000003024.a	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b.c	ENSGT00940000158694
Eastern brown snake	MODERN SPECIES	59	ENSPTXG00000014931	ENSPTXG00000014926	TIMM29 (ENSPTXG00000014925)	YIPF2 (ENSPTXG00000014920)	CARM1 (ENSPTXG00000014915)	POSTN (ENSPTXG00000014901)	SUPT20H (ENSPTXG00000014888)	EXOSC8 (ENSPTXG00000014882)	ALG5 (ENSPTXG00000014877)	TMEM39A (ENSPTXG00000014874)	ENSPTXG00000014870	CHD1L (ENSPTXG00000014866)	CASQ2 (ENSPTXG00000014862) #18	NHLH2 (ENSPTXG00000014861) #19	SLC22A15 (ENSPTXG00000014858) #20	ATP1A1 (ENSPTXG00000014853) #22	PLA1A (ENSPTXG00000014851)	POPDC2 (ENSPTXG00000014813)	ENSPTXG00000014812	GSK3B (ENSPTXG00000014811)	GPR156 (ENSPTXG00000014809)	LRRC58 (ENSPTXG00000014808)	FSTL1 (ENSPTXG00000014805)	NDUFB4 (ENSPTXG00000014804)	HGD (ENSPTXG00000014802)	RABL3 (ENSPTXG00000014801)	GTF2E1 (ENSPTXG00000014800)	STXBP5L (ENSPTXG00000014640)	POLQ (ENSPTXG00000014632)	ENSPTXG00000014625	ENSPTXG00000014621
Mainland tiger snake	MODERN SPECIES	73	ENSNSUG00000019404	TIMM29 (ENSNSUG00000019403)	YIPF2 (ENSNSUG00000019402)	CARM1 (ENSNSUG00000019401)	ENSNSUG00000019399	POSTN (ENSNSUG00000019345)	ENSNSUG00000019344	SUPT20H (ENSNSUG00000019343)	EXOSC8 (ENSNSUG00000019342)	ALG5 (ENSNSUG00000019341)	TMEM39A (ENSNSUG00000019340)	CHD1L (ENSNSUG00000019339)	CASQ2 (ENSNSUG00000019338) #18	NHLH2 (ENSNSUG00000019337) #19	SLC22A15 (ENSNSUG00000019336) #20	ATP1A1 (ENSNSUG00000019161) #22	PLA1A (ENSNSUG00000019160)	POPDC2 (ENSNSUG00000019159)	ENSNSUG00000019158	CFAP91 (ENSNSUG00000019157)	GSK3B (ENSNSUG00000019156)	GPR156 (ENSNSUG00000019155)	LRRC58 (ENSNSUG00000019154)	FSTL1 (ENSNSUG00000019152)	NDUFB4 (ENSNSUG00000019151)	HGD (ENSNSUG00000019150)	RABL3 (ENSNSUG00000019149)	ENSNSUG00000019148	ENSNSUG00000019147	STXBP5L (ENSNSUG00000019146)	POLQ (ENSNSUG00000019145)
Blue-lipped sea krait	MODERN SPECIES	7264																ATP1A1 (ENSLLTG00000008806) #22
Indian cobra	DUPLICATION
Indian cobra	MODERN SPECIES	1	TIMM29 (ENSNNAG00000017806)	YIPF2 (ENSNNAG00000017812)	CARM1 (ENSNNAG00000017817)	POSTN (ENSNNAG00000017837)	ENSNNAG00000017870	SUPT20H (ENSNNAG00000017876)	EXOSC8 (ENSNNAG00000017886)	ALG5 (ENSNNAG00000017889)	TMEM39A (ENSNNAG00000017890)	CHD1L (ENSNNAG00000017899)	ENSNNAG00000017918	CASQ2 (ENSNNAG00000017922) #18	NHLH2 (ENSNNAG00000017926) #19	SLC22A15 (ENSNNAG00000017928) #20	ENSNNAG00000018176 #22	ENSNNAG00000018835 #22	PLA1A (ENSNNAG00000018854)	POPDC2 (ENSNNAG00000018864)	ENSNNAG00000007116	ENSNNAG00000007253	ENSNNAG00000007368	GSK3B (ENSNNAG00000007404)	GPR156 (ENSNNAG00000007531)	LRRC58 (ENSNNAG00000007609)	FSTL1 (ENSNNAG00000007651)	NDUFB4 (ENSNNAG00000007707)	HGD (ENSNNAG00000007756)	RABL3 (ENSNNAG00000007847)	GTF2E1 (ENSNNAG00000007877)	STXBP5L (ENSNNAG00000007934)	POLQ (ENSNNAG00000008643)
Indian cobra	MODERN SPECIES	1	ENSNNAG00000017802	TIMM29 (ENSNNAG00000017806)	YIPF2 (ENSNNAG00000017812)	CARM1 (ENSNNAG00000017817)	POSTN (ENSNNAG00000017837)	ENSNNAG00000017870	SUPT20H (ENSNNAG00000017876)	EXOSC8 (ENSNNAG00000017886)	ALG5 (ENSNNAG00000017889)	TMEM39A (ENSNNAG00000017890)	CHD1L (ENSNNAG00000017899)	ENSNNAG00000017918	CASQ2 (ENSNNAG00000017922) #18	NHLH2 (ENSNNAG00000017926) #19	SLC22A15 (ENSNNAG00000017928) #20	ENSNNAG00000018176 #22	ENSNNAG00000018835 #22	PLA1A (ENSNNAG00000018854)	POPDC2 (ENSNNAG00000018864)	ENSNNAG00000007116	ENSNNAG00000007253	ENSNNAG00000007368	GSK3B (ENSNNAG00000007404)	GPR156 (ENSNNAG00000007531)	LRRC58 (ENSNNAG00000007609)	FSTL1 (ENSNNAG00000007651)	NDUFB4 (ENSNNAG00000007707)	HGD (ENSNNAG00000007756)	RABL3 (ENSNNAG00000007847)	GTF2E1 (ENSNNAG00000007877)	STXBP5L (ENSNNAG00000007934)
Lizard	MODERN SPECIES	1027															ENSACAG00000043458	ENSACAG00000003402 #22	ENSACAG00000037415	PLA1A (ENSACAG00000003503)	POPDC2 (ENSACAG00000003557)	ENSACAG00000026666	CFAP91 (ENSACAG00000003580)	ENSACAG00000027212	GSK3B (ENSACAG00000003655)	SHFL (ENSACAG00000003734)	ENSACAG00000035757	ANGPTL6 (ENSACAG00000003753)	ENSACAG00000003786	PPAN (ENSACAG00000003838)	P2RY11 (ENSACAG00000028164)	ENSACAG00000035748	EIF3G (ENSACAG00000003880)
tuatara	MODERN SPECIES	1096	ENSSPUG00000016720	ENSSPUG00000016735	AQP6 (ENSSPUG00000016757)	TRPC4 (ENSSPUG00000016771)	POSTN (ENSSPUG00000016779)	SUPT20H (ENSSPUG00000016802)	EXOSC8 (ENSSPUG00000016825)	ALG5 (ENSSPUG00000016834)	TMEM39A (ENSSPUG00000016848)	CHD1L (ENSSPUG00000016865)	VANGL1 (ENSSPUG00000016879) #17	CASQ2 (ENSSPUG00000016892) #18	NHLH2 (ENSSPUG00000016906) #19	SLC22A15 (ENSSPUG00000016922) #20	MAB21L3 (ENSSPUG00000016959) #21	ATP1A1 (ENSSPUG00000016982) #22	ENSSPUG00000017027	PLA1A (ENSSPUG00000017042)	POPDC2 (ENSSPUG00000017054)	ENSSPUG00000017067	CFAP91 (ENSSPUG00000017093)	GSK3B (ENSSPUG00000017220)	LRRC58 (ENSSPUG00000017254)	FSTL1 (ENSSPUG00000017282)	ENSSPUG00000017292	HGD (ENSSPUG00000017347)	RABL3 (ENSSPUG00000017490)	GTF2E1 (ENSSPUG00000017495)
Archelosauria	ANCESTRAL SPECIES	30	ENSGT00940000156392.a	ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000235556	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696
Archosauria	ANCESTRAL SPECIES	2	ENSGT00940000156392.a	ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000235556	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b
Aves	ANCESTRAL SPECIES		ENSGT00940000156392.a	ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000235556	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b
Neognathae	ANCESTRAL SPECIES	1	ENSGT00940000156392.a	ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000235556	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b
Neognathae_b	ANCESTRAL SPECIES		ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000235556	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696
Neognathae_c	ANCESTRAL SPECIES	4	ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b	ENSGT00940000159015
Golden eagle	MODERN SPECIES	23	ENSACCG00020001577	IGSF11 (ENSACCG00020001558)	UPK1B (ENSACCG00020001519)	ARHGAP31 (ENSACCG00020001486)	ENSACCG00020001472	ENSACCG00020001447	B4GALT4 (ENSACCG00020001427)	TMEM39A (ENSACCG00020001402)	ENSACCG00020001380	CHD1L (ENSACCG00020001177)	VANGL1 (ENSACCG00020000895) #17	CASQ2 (ENSACCG00020000868) #18	NHLH2 (ENSACCG00020000844) #19	SLC22A15 (ENSACCG00020000808) #20	MAB21L3 (ENSACCG00020000703) #21	ATP1A1 (ENSACCG00020000664) #22	ENSACCG00020000616	PLA1A (ENSACCG00020000537)	POPDC2 (ENSACCG00020000516)	ENSACCG00020000466	CFAP91 (ENSACCG00020000422)	GSK3B (ENSACCG00020000388)	GPR156 (ENSACCG00020000354)	LRRC58 (ENSACCG00020000335)	FSTL1 (ENSACCG00020016401)	NDUFB4 (ENSACCG00020016392)	HGD (ENSACCG00020016380)	RABL3 (ENSACCG00020016375)	GTF2E1 (ENSACCG00020016373)	STXBP5L (ENSACCG00020016362)	ENSACCG00020016348
Kakapo	MODERN SPECIES	28	GAP43 (ENSSHBG00005009180)	LSAMP (ENSSHBG00005009198)	IGSF11 (ENSSHBG00005009215)	UPK1B (ENSSHBG00005009226)	ARHGAP31 (ENSSHBG00005009255)	ENSSHBG00005009265	ENSSHBG00005009271	B4GALT4 (ENSSHBG00005009283)	TMEM39A (ENSSHBG00005009297)	ENSSHBG00005009317	VANGL1 (ENSSHBG00005009329) #17	CASQ2 (ENSSHBG00005009342) #18	ENSSHBG00005009363	SLC22A15 (ENSSHBG00005009376) #20	MAB21L3 (ENSSHBG00005009404) #21	ATP1A1 (ENSSHBG00005009427) #22	ENSSHBG00005009455	ENSSHBG00005009467	MIX23 (ENSSHBG00005009487)	FAM162A (ENSSHBG00005009499)	KPNA1 (ENSSHBG00005009510)	FBXO40 (ENSSHBG00005009521)	SCNN1A (ENSSHBG00005009530)	VAMP1 (ENSSHBG00005009551)	MRPL51 (ENSSHBG00005009560)	NCAPD2 (ENSSHBG00005000924)	ENSSHBG00005000939	GAPDH (ENSSHBG00005000947)	IFFO1 (ENSSHBG00005000954)	NOP2 (ENSSHBG00005005753)	CHD4 (ENSSHBG00005005796)
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000235556	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000235556	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b
Passeriformes_g	ANCESTRAL SPECIES	25	ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000235556	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00940000158516	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000235556	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b
Common canary	MODERN SPECIES	4	LSAMP (ENSSCAG00000009446)	ENSSCAG00000009462	IGSF11 (ENSSCAG00000009501)	UPK1B (ENSSCAG00000009521)	ARHGAP31 (ENSSCAG00000009531)	ENSSCAG00000009539	ENSSCAG00000009571	B4GALT4 (ENSSCAG00000009577)	TMEM39A (ENSSCAG00000009590)	ENSSCAG00000009597	CHD1L (ENSSCAG00000009606)	VANGL1 (ENSSCAG00000009621) #17	CASQ2 (ENSSCAG00000009630) #18	SLC22A15 (ENSSCAG00000009657) #20	MAB21L3 (ENSSCAG00000009662) #21	ATP1A1 (ENSSCAG00000009673) #22	ENSSCAG00000009678	ENSSCAG00000009682	PLA1A (ENSSCAG00000009691)	POPDC2 (ENSSCAG00000009705)	ENSSCAG00000009708	CFAP91 (ENSSCAG00000009721)	GSK3B (ENSSCAG00000009741)	GPR156 (ENSSCAG00000009744)	LRRC58 (ENSSCAG00000009753)	FSTL1 (ENSSCAG00000009760)	NDUFB4 (ENSSCAG00000009763)	HGD (ENSSCAG00000009770)	RABL3 (ENSSCAG00000009779)	GTF2E1 (ENSSCAG00000009784)	STXBP5L (ENSSCAG00000009968)
Zebra finch	MODERN SPECIES		ENSTGUG00000022659	ENSTGUG00000019556	ENSTGUG00000027649	IGSF11 (ENSTGUG00000013400)	UPK1B (ENSTGUG00000013399)	ARHGAP31 (ENSTGUG00000020207)	ENSTGUG00000013397	ENSTGUG00000013396	B4GALT4 (ENSTGUG00000013395)	TMEM39A (ENSTGUG00000013394)	ENSTGUG00000013393	CHD1L (ENSTGUG00000013392)	VANGL1 (ENSTGUG00000013391) #17	CASQ2 (ENSTGUG00000013390) #18	NHLH2 (ENSTGUG00000013389) #19	ATP1A1 (ENSTGUG00000020927) #22	SLC22A15 (ENSTGUG00000013386) #20	ENSTGUG00000020500	ENSTGUG00000013385	PLA1A (ENSTGUG00000013384)	POPDC2 (ENSTGUG00000013383)	ENSTGUG00000029427	CFAP91 (ENSTGUG00000013381)	GSK3B (ENSTGUG00000013380)	GPR156 (ENSTGUG00000013379)	LRRC58 (ENSTGUG00000022807)	FSTL1 (ENSTGUG00000013377)	NDUFB4 (ENSTGUG00000013376)	HGD (ENSTGUG00000013375)	RABL3 (ENSTGUG00000013374)	GTF2E1 (ENSTGUG00000013373)
Medium ground finch	MODERN SPECIES	23	ENSGFOG00000002245	LSAMP (ENSGFOG00000002247)	IGSF11 (ENSGFOG00000002265)	UPK1B (ENSGFOG00000002278)	ARHGAP31 (ENSGFOG00000002291)	ENSGFOG00000002315	ENSGFOG00000002335	B4GALT4 (ENSGFOG00000002353)	TMEM39A (ENSGFOG00000002378)	ENSGFOG00000002391	CHD1L (ENSGFOG00000002423)	VANGL1 (ENSGFOG00000002463) #17	CASQ2 (ENSGFOG00000002484) #18	SLC22A15 (ENSGFOG00000002542) #20	MAB21L3 (ENSGFOG00000002563) #21	ATP1A1 (ENSGFOG00000002575) #22	ENSGFOG00000002615	ENSGFOG00000002627	PLA1A (ENSGFOG00000000028)	POPDC2 (ENSGFOG00000000029)	ENSGFOG00000000031	CFAP91 (ENSGFOG00000000032)	GSK3B (ENSGFOG00000000035)	GPR156 (ENSGFOG00000000036)	LRRC58 (ENSGFOG00000000041)	FSTL1 (ENSGFOG00000000047)	ENSGFOG00000000053	HGD (ENSGFOG00000000064)	ENSGFOG00000000090	GTF2E1 (ENSGFOG00000000093)	STXBP5L (ENSGFOG00000000112)
Flycatcher	MODERN SPECIES		LSAMP (ENSFALG00000006033)	IGSF11 (ENSFALG00000006041)	UPK1B (ENSFALG00000026624)	ENSFALG00000028286	ENSFALG00000006064	ENSFALG00000006068	B4GALT4 (ENSFALG00000006070)	ENSFALG00000006072	ENSFALG00000006077	ENSFALG00000006087	VANGL1 (ENSFALG00000006097) #17	CASQ2 (ENSFALG00000006100) #18	ENSFALG00000006103	SLC22A15 (ENSFALG00000006106) #20	MAB21L3 (ENSFALG00000006110) #21	ATP1A1 (ENSFALG00000006143) #22	ENSFALG00000024943	TBX19 (ENSFALG00000005706)	SFT2D2 (ENSFALG00000028942)	TIPRL (ENSFALG00000005729)	GPR161 (ENSFALG00000005743)	ENSFALG00000005755	ENSFALG00000005759	ENSFALG00000005771	ENSFALG00000005788	ENSFALG00000023110	ENSFALG00000005803	CMSS1 (ENSFALG00000025596)	ENSFALG00000005829	TBC1D23 (ENSFALG00000005843)	NIT2 (ENSFALG00000005878)
Great tit	MODERN SPECIES		LSAMP (ENSPMJG00000010853)	IGSF11 (ENSPMJG00000010812)	UPK1B (ENSPMJG00000010779)	ARHGAP31 (ENSPMJG00000010778)	ENSPMJG00000010776	ENSPMJG00000010775	B4GALT4 (ENSPMJG00000010774)	TMEM39A (ENSPMJG00000010742)	ENSPMJG00000010739	CHD1L (ENSPMJG00000010736)	VANGL1 (ENSPMJG00000010735) #17	CASQ2 (ENSPMJG00000010731) #18	NHLH2 (ENSPMJG00000010729) #19	SLC22A15 (ENSPMJG00000010688) #20	MAB21L3 (ENSPMJG00000010685) #21	ATP1A1 (ENSPMJG00000010677) #22	ENSPMJG00000010675	PLA1A (ENSPMJG00000010672)	POPDC2 (ENSPMJG00000010671)	COX17 (ENSPMJG00000010664)	CFAP91 (ENSPMJG00000010605)	GSK3B (ENSPMJG00000010600)	GPR156 (ENSPMJG00000010598)	LRRC58 (ENSPMJG00000010597)	ENSPMJG00000010530	FSTL1 (ENSPMJG00000010529)	ENSPMJG00000010528	HGD (ENSPMJG00000010526)	RABL3 (ENSPMJG00000010524)	GTF2E1 (ENSPMJG00000010522)	STXBP5L (ENSPMJG00000010500)
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT01030000235556	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b	ENSGT00940000158694
Anatidae	ANCESTRAL SPECIES	6	ENSGT00940000156392.a	ENSGT00940000168076	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b	ENSGT00940000158694
Pink-footed goose	MODERN SPECIES	5	LSAMP (ENSABRG00000009862)	IGSF11 (ENSABRG00000009943)	ENSABRG00000009952	UPK1B (ENSABRG00000009963)	ARHGAP31 (ENSABRG00000010024)	ENSABRG00000010033	ENSABRG00000010037	B4GALT4 (ENSABRG00000010048)	TMEM39A (ENSABRG00000010057)	ENSABRG00000010067	CHD1L (ENSABRG00000010095)	VANGL1 (ENSABRG00000010157) #17	CASQ2 (ENSABRG00000010169) #18	NHLH2 (ENSABRG00000010180) #19	SLC22A15 (ENSABRG00000010193) #20	ATP1A1 (ENSABRG00000010220) #22	ENSABRG00000010256	PLA1A (ENSABRG00000010260)	POPDC2 (ENSABRG00000010264)	ENSABRG00000010266	CFAP91 (ENSABRG00000010269)	GSK3B (ENSABRG00000010305)	ENSABRG00000010329	GPR156 (ENSABRG00000010338)	LRRC58 (ENSABRG00000010349)	FSTL1 (ENSABRG00000010360)	NDUFB4 (ENSABRG00000010370)	HGD (ENSABRG00000010377)	RABL3 (ENSABRG00000010395)	GTF2E1 (ENSABRG00000010408)	STXBP5L (ENSABRG00000010733)
Duck	MODERN SPECIES		LSAMP (ENSAPLG00000010325)	IGSF11 (ENSAPLG00000008337)	UPK1B (ENSAPLG00000008825)	ARHGAP31 (ENSAPLG00000009089)	ENSAPLG00000025438	ENSAPLG00000009258	B4GALT4 (ENSAPLG00000009388)	TMEM39A (ENSAPLG00000009675)	ENSAPLG00000009803	CHD1L (ENSAPLG00000009976)	VANGL1 (ENSAPLG00000011029) #17	CASQ2 (ENSAPLG00000011267) #18	NHLH2 (ENSAPLG00000023891) #19	SLC22A15 (ENSAPLG00000012634) #20	MAB21L3 (ENSAPLG00000012622) #21	ATP1A1 (ENSAPLG00000011285) #22	ENSAPLG00000011249	PLA1A (ENSAPLG00000025714)	POPDC2 (ENSAPLG00000019599)	ENSAPLG00000011097	CFAP91 (ENSAPLG00000011017)	GSK3B (ENSAPLG00000007990)	GPR156 (ENSAPLG00000019941)	LRRC58 (ENSAPLG00000029420)	FSTL1 (ENSAPLG00000027059)	NDUFB4 (ENSAPLG00000017845)	HGD (ENSAPLG00000006938)	RABL3 (ENSAPLG00000006732)	GTF2E1 (ENSAPLG00000006481)	STXBP5L (ENSAPLG00000014395)	ENSAPLG00000014869
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT01030000235556	ENSGT00940000154840.b #22	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b	ENSGT00940000158694	ENSGT00390000016694.b
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00940000154487.A	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT01030000235556	ENSGT00940000154840.b #22	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00940000164584	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b	ENSGT00940000158694	ENSGT00390000016694.b
Chicken	MODERN SPECIES		IGSF11 (ENSGALG00010025653)	UPK1B (ENSGALG00010025594)	ARHGAP31 (ENSGALG00010025574)	B3GAT1L (ENSGALG00010025548)	B4GALT3 (ENSGALG00010025531)	B4GALT4 (ENSGALG00010025523)	TMEM39A (ENSGALG00010025481)	ENSGALG00010025465	CHD1L (ENSGALG00010025448)	VANGL1 (ENSGALG00010025428) #17	CASQ2 (ENSGALG00010025418) #18	NHLH2 (ENSGALG00010025220) #19	SLC22A15 (ENSGALG00010025400) #20	MAB21L3 (ENSGALG00010025382) #21	ENSGALG00010025350	ATP1A1 (ENSGALG00010025292) #22	PLA1A (ENSGALG00010025182)	POPDC2 (ENSGALG00010025168)	COX17 (ENSGALG00010025147)	CFAP91 (ENSGALG00010025138)	GSK3A (ENSGALG00010025103)	GPR156 (ENSGALG00010025060)	LRRC58 (ENSGALG00010026272)	FSTL1 (ENSGALG00010025032)	NDUFB4 (ENSGALG00010024994)	HGD (ENSGALG00010024948)	RABL3 (ENSGALG00010024940)	GTF2E1 (ENSGALG00010024925)	STXBP5L (ENSGALG00010024915)	POLQ (ENSGALG00010024871)	METTL16 (ENSGALG00010024862)
Turkey	MODERN SPECIES		LSAMP (ENSMGAG00000014318)	IGSF11 (ENSMGAG00000014313)	ENSMGAG00000019562	UPK1B (ENSMGAG00000014315)	ENSMGAG00000014314	ENSMGAG00000014312	ENSMGAG00000014308	B4GALT4 (ENSMGAG00000014307)	ENSMGAG00000014306	ENSMGAG00000020983	ENSMGAG00000014304	VANGL1 (ENSMGAG00000014303) #17	CASQ2 (ENSMGAG00000014302) #18	SLC22A15 (ENSMGAG00000014301) #20	MAB21L3 (ENSMGAG00000014300) #21	ATP1A1 (ENSMGAG00000014297) #22	PLA1A (ENSMGAG00000014293)	POPDC2 (ENSMGAG00000014291)	ENSMGAG00000014290	CFAP91 (ENSMGAG00000014289)	GSK3B (ENSMGAG00000014288)	LRRC58 (ENSMGAG00000014285)	FSTL1 (ENSMGAG00000014283)	ENSMGAG00000016069	HGD (ENSMGAG00000014280)	RABL3 (ENSMGAG00000014276)	GTF2E1 (ENSMGAG00000014272)	STXBP5L (ENSMGAG00000014266)	POLQ (ENSMGAG00000014264)	ENSMGAG00000021653	ENSMGAG00000014258
Japanese quail	MODERN SPECIES		IGSF11 (ENSCJPG00005017409)	UPK1B (ENSCJPG00005017408)	ARHGAP31 (ENSCJPG00005017407)	ENSCJPG00005017405	ENSCJPG00005017403	B4GALT4 (ENSCJPG00005017401)	TMEM39A (ENSCJPG00005017400)	ENSCJPG00005017399	CHD1L (ENSCJPG00005017397)	VANGL1 (ENSCJPG00005017394) #17	CASQ2 (ENSCJPG00005017386) #18	NHLH2 (ENSCJPG00005017385) #19	SLC22A15 (ENSCJPG00005017383) #20	MAB21L3 (ENSCJPG00005017382) #21	ENSCJPG00005017379	ATP1A1 (ENSCJPG00005017374) #22	PLA1A (ENSCJPG00005017372)	POPDC2 (ENSCJPG00005017369)	ENSCJPG00005017368	CFAP91 (ENSCJPG00005017367)	GSK3B (ENSCJPG00005017366)	GPR156 (ENSCJPG00005017365)	LRRC58 (ENSCJPG00005017363)	FSTL1 (ENSCJPG00005017362)	NDUFB4 (ENSCJPG00005017357)	HGD (ENSCJPG00005017356)	RABL3 (ENSCJPG00005017355)	GTF2E1 (ENSCJPG00005017354)	STXBP5L (ENSCJPG00005017353)	POLQ (ENSCJPG00005017298)	METTL16 (ENSCJPG00005017297)
African ostrich	MODERN SPECIES	620	ENSSCUG00000008282	ENSSCUG00000008283	IGSF11 (ENSSCUG00000008285)	UPK1B (ENSSCUG00000008287)	ARHGAP31 (ENSSCUG00000008288)	ENSSCUG00000008289	ENSSCUG00000008290	B4GALT4 (ENSSCUG00000008291)	TMEM39A (ENSSCUG00000008294)	ENSSCUG00000008297	CHD1L (ENSSCUG00000008298)	VANGL1 (ENSSCUG00000008302) #17	CASQ2 (ENSSCUG00000008304) #18	SLC22A15 (ENSSCUG00000008306) #20	MAB21L3 (ENSSCUG00000008308) #21	ATP1A1 (ENSSCUG00000008337) #22
Australian saltwater crocodile	MODERN SPECIES	60	ENSCPRG00005003786	IGSF11 (ENSCPRG00005003768)	UPK1B (ENSCPRG00005003732)	ARHGAP31 (ENSCPRG00005003717)	ENSCPRG00005003713	ENSCPRG00005003699	B4GALT4 (ENSCPRG00005003694)	TMEM39A (ENSCPRG00005003687)	ENSCPRG00005003669	CHD1L (ENSCPRG00005003632)	VANGL1 (ENSCPRG00005003618) #17	CASQ2 (ENSCPRG00005003611) #18	NHLH2 (ENSCPRG00005003607) #19	SLC22A15 (ENSCPRG00005003580) #20	MAB21L3 (ENSCPRG00005003561) #21	ATP1A1 (ENSCPRG00005003542) #22	ENSCPRG00005003516	PLA1A (ENSCPRG00005003510)	POPDC2 (ENSCPRG00005003504)	ENSCPRG00005003500	CFAP91 (ENSCPRG00005003491)	GSK3B (ENSCPRG00005003476)	GPR156 (ENSCPRG00005003458)	LRRC58 (ENSCPRG00005003456)	FSTL1 (ENSCPRG00005003453)	NDUFB4 (ENSCPRG00005003439)	HGD (ENSCPRG00005003427)	RABL3 (ENSCPRG00005003423)	GTF2E1 (ENSCPRG00005003420)	STXBP5L (ENSCPRG00005001784)	ENSCPRG00005001626
Cryptodira	ANCESTRAL SPECIES		ENSGT00940000156392.a	ENSGT00940000168076	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000235556	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00940000165328	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000235556	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696.hc.a	ENSGT00950000182906.b.b
Emydidae	ANCESTRAL SPECIES	36	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT01030000235556	ENSGT00940000154840.b #22	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00390000002329	ENSGT01040000242649	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696.hc.a	ENSGT00950000182906.b.b
painted turtle	MODERN SPECIES		ARHGAP31 (ENSCPBG00000002832)	ENSCPBG00000002821	ENSCPBG00000002779	ENSCPBG00000002738	B4GALT4 (ENSCPBG00000002710)	ENSCPBG00000002678	TMEM39A (ENSCPBG00000002656)	ENSCPBG00000002639	CHD1L (ENSCPBG00000002600)	VANGL1 (ENSCPBG00000002571) #17	CASQ2 (ENSCPBG00000002545) #18	NHLH2 (ENSCPBG00000002535) #19	SLC22A15 (ENSCPBG00000002507) #20	MAB21L3 (ENSCPBG00000002492) #21	ENSCPBG00000002478	ATP1A1 (ENSCPBG00000002472) #22	ENSCPBG00000002355	PLA1A (ENSCPBG00000002278)	POPDC2 (ENSCPBG00000002262)	ENSCPBG00000002241	CFAP91 (ENSCPBG00000002188)	GSK3B (ENSCPBG00000002148)	GPR156 (ENSCPBG00000002112)	LRRC58 (ENSCPBG00000002101)	FSTL1 (ENSCPBG00000002072)	NDUFB4 (ENSCPBG00000002050)	HGD (ENSCPBG00000002015)	RABL3 (ENSCPBG00000001999)	GTF2E1 (ENSCPBG00000001978)	STXBP5L (ENSCPBG00000001879)	POLQ (ENSCPBG00000001827)
Three-toed box turtle	MODERN SPECIES	114	IGSF11 (ENSTMTG00000004818)	UPK1B (ENSTMTG00000004724)	ARHGAP31 (ENSTMTG00000004686)	ENSTMTG00000004547	ENSTMTG00000004515	B4GALT4 (ENSTMTG00000004505)	TMEM39A (ENSTMTG00000004488)	ENSTMTG00000004408	CHD1L (ENSTMTG00000004351)	VANGL1 (ENSTMTG00000004331) #17	CASQ2 (ENSTMTG00000004186) #18	NHLH2 (ENSTMTG00000004165) #19	SLC22A15 (ENSTMTG00000004132) #20	MAB21L3 (ENSTMTG00000004115) #21	ENSTMTG00000004093	ATP1A1 (ENSTMTG00000004043) #22	PLA1A (ENSTMTG00000004015)	POPDC2 (ENSTMTG00000003880)	COX17 (ENSTMTG00000003860)	ENSTMTG00000003847	ENSTMTG00000003833	ENSTMTG00000003818	ENSTMTG00000003808	CFAP91 (ENSTMTG00000003678)	GSK3B (ENSTMTG00000003614)	GPR156 (ENSTMTG00000003580)	LRRC58 (ENSTMTG00000003570)	FSTL1 (ENSTMTG00000003539)	NDUFB4 (ENSTMTG00000003518)	HGD (ENSTMTG00000003464)	RABL3 (ENSTMTG00000003439)
Testudinidae	ANCESTRAL SPECIES		ENSGT00940000165328	ENSGT00940000156392.a	ENSGT00940000160779	ENSGT00940000159458	ENSGT00940000165782	ENSGT00940000166068	ENSGT00940000158378	ENSGT00390000018895.a	ENSGT00940000166284	ENSGT00940000159402	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000162602 #19	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT01030000235556	ENSGT00510000049596	ENSGT00940000159279	ENSGT00390000002563.b.a.b	ENSGT00390000002329	ENSGT00390000003024	ENSGT00520000055635.c.a	ENSGT00940000159755	ENSGT00940000156556	ENSGT00940000157784	ENSGT00390000007133	ENSGT00390000004601	ENSGT00390000007467	ENSGT00390000016696.hc.a	ENSGT00950000182906.b.b
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005000488	IGSF11 (ENSGEVG00005000512)	UPK1B (ENSGEVG00005000534)	ARHGAP31 (ENSGEVG00005000557)	ENSGEVG00005000587	ENSGEVG00005000598	B4GALT4 (ENSGEVG00005000616)	TMEM39A (ENSGEVG00005000643)	ENSGEVG00005000681	CHD1L (ENSGEVG00005000712)	VANGL1 (ENSGEVG00005000739) #17	CASQ2 (ENSGEVG00005000799) #18	NHLH2 (ENSGEVG00005000818) #19	SLC22A15 (ENSGEVG00005000829) #20	MAB21L3 (ENSGEVG00005000850) #21	ATP1A1 (ENSGEVG00005000870) #22	ENSGEVG00005000905	ENSGEVG00005000922	PLA1A (ENSGEVG00005000951)	POPDC2 (ENSGEVG00005000985)	COX17 (ENSGEVG00005001021)	ENSGEVG00005001033	CFAP91 (ENSGEVG00005001084)	GSK3B (ENSGEVG00005001193)	GPR156 (ENSGEVG00005001247)	LRRC58 (ENSGEVG00005001266)	FSTL1 (ENSGEVG00005001285)	ENSGEVG00005001314	NDUFB4 (ENSGEVG00005001388)	HGD (ENSGEVG00005001401)	RABL3 (ENSGEVG00005001440)
Abingdon island giant tortoise	MODERN SPECIES	2119										VANGL1 (ENSCABG00000018702) #17	CASQ2 (ENSCABG00000018699) #18	NHLH2 (ENSCABG00000018697) #19	ENSCABG00000018696 #20	ENSCABG00000018695 #20	MAB21L3 (ENSCABG00000018693) #21	ATP1A1 (ENSCABG00000018458) #22	ENSCABG00000018421	PLA1A (ENSCABG00000018418)	POPDC2 (ENSCABG00000018409)	COX17 (ENSCABG00000018404)	CFAP91 (ENSCABG00000018389)	GSK3B (ENSCABG00000018385)	GPR156 (ENSCABG00000018384)	LRRC58 (ENSCABG00000018383)	FSTL1 (ENSCABG00000018380)
Chinese turtle	MODERN SPECIES	1836										TMEM39A (ENSPSIG00000011628)	ENSPSIG00000011910	CHD1L (ENSPSIG00000012595)	CASQ2 (ENSPSIG00000014323) #18	SLC22A15 (ENSPSIG00000016056) #20	MAB21L3 (ENSPSIG00000016310) #21	ATP1A1 (ENSPSIG00000016388) #22	PLA1A (ENSPSIG00000006753)	POPDC2 (ENSPSIG00000007812)	ENSPSIG00000001991	CFAP91 (ENSPSIG00000008161)	GSK3B (ENSPSIG00000008971)	GPR156 (ENSPSIG00000010275)	LRRC58 (ENSPSIG00000010373)	FSTL1 (ENSPSIG00000010391)	HGD (ENSPSIG00000011020)	RABL3 (ENSPSIG00000011358)	GTF2E1 (ENSPSIG00000012408)	STXBP5L (ENSPSIG00000012718)	POLQ (ENSPSIG00000013657)	METTL16 (ENSPSIG00000014760)	ENSPSIG00000014847
Anura	ANCESTRAL SPECIES	255										ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000012496.a #17	ENSGT00390000019377.b #18	ENSGT00940000160364 #20	ENSGT01050000244827.B #21	ENSGT00940000154840.b #22	ENSGT00940000162718 #25	ENSGT00940000155177.b.m #23	ENSGT00940000155177.b.n.a #23	ENSGT00940000158367 #24
Leishan spiny toad	MODERN SPECIES	1631																ATP1A1 (ENSLLEG00000028068) #22	ENSLLEG00000028497	ENSLLEG00000028520
Frog	MODERN SPECIES	2	cryaa (ENSXETG00000020802)	u2af1 (ENSXETG00000040592)	ENSXETG00000045493	icoslg (ENSXETG00000047833)	ENSXETG00000045526	ENSXETG00000041442	ENSXETG00000042310	ENSXETG00000041110	timmdc1 (ENSXETG00000041609)	poglut1 (ENSXETG00000047724)	VANGL1 (ENSXETG00000048296) #17	casq2 (ENSXETG00000046235) #18	ENSXETG00000048594	slc22a15.1 (ENSXETG00000020363) #20	MAB21L3 (ENSXETG00000049082) #21	atp1a1 (ENSXETG00000020366) #22	ENSXETG00000040202	ENSXETG00000040957	ENSXETG00000040342	trim45 (ENSXETG00000017042) ##26	ENSXETG00000035904 #25	ENSXETG00000043768 #23	igsf3 (ENSXETG00000047805) #23	mcmbp (ENSXETG00000003351) #24	cbs (ENSXETG00000047466)	pknox1 (ENSXETG00000032286)	ndufv3 (ENSXETG00000045013)	wdr4 (ENSXETG00000044423)	csrp3 (ENSXETG00000010016)	ENSXETG00000044217	vps28 (ENSXETG00000004029)
Coelacanth	MODERN SPECIES	966			SCAF4 (ENSLACG00000013913)	SOD1 (ENSLACG00000013736)	TIAM1 (ENSLACG00000011787)	ENSLACG00000011362	cldn8.3 (ENSLACG00000011216)	ENSLACG00000010878	GRIK1 (ENSLACG00000009256)	TIMMDC1 (ENSLACG00000008939)	POGLUT1 (ENSLACG00000008517)	VANGL1 (ENSLACG00000008020) #17	CASQ2 (ENSLACG00000007173) #18	SLC22A15 (ENSLACG00000005854) #20	MAB21L3 (ENSLACG00000005381) #21	ATP1A1 (ENSLACG00000001454) #22