Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368 #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Glires ANCESTRAL SPECIES ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Rodentia ANCESTRAL SPECIES ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Rodentia_B ANCESTRAL SPECIES ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Myomorpha ANCESTRAL SPECIES 12 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Muroidea ANCESTRAL SPECIES 6 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Muroidea_A ANCESTRAL SPECIES 5 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Cricetidae ANCESTRAL SPECIES 6 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000165376 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000164746 #28 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Northern American deer mouse MODERN SPECIES 19 Dennd2c (ENSPEMG00000002658) #7 Ampd1 (ENSPEMG00000017567) #8 Nras (ENSPEMG00000029639) #9 Csde1 (ENSPEMG00000020357) #10 Sike1 (ENSPEMG00000020550) #11 Nr1h5 (ENSPEMG00000021165) #12 Sycp1 (ENSPEMG00000023338) #13 Tshb (ENSPEMG00000024182) #14 Tspan2 (ENSPEMG00000023387) #15 Ngf (ENSPEMG00000001587) #16 Vangl1 (ENSPEMG00000026640) #17 Casq2 (ENSPEMG00000012959) #18 Nhlh2 (ENSPEMG00000025983) #19 Slc22a15 (ENSPEMG00000023603) #20 Mab21l3 (ENSPEMG00000023035) #21 Atp1a1 (ENSPEMG00000010999) #22 Igsf3 (ENSPEMG00000011916) #23 Cd2 (ENSPEMG00000018550) #24 Ptgfrn (ENSPEMG00000009682) #25 Cd101 (ENSPEMG00000008402) #26 ENSPEMG00000010330 #27 ENSPEMG00000010451 #28 Trim45 (ENSPEMG00000007787) #29 ENSPEMG00000027103 #30 Man1a2 (ENSPEMG00000007670) #31 ENSPEMG00000031182 #32 Gdap2 (ENSPEMG00000020913) #33 Wdr3 (ENSPEMG00000011928) #34 Spag17 (ENSPEMG00000012291) #35 Tbx15 (ENSPEMG00000026645) #36 ENSPEMG00000018152 #37 Prairie vole MODERN SPECIES 8 Ampd1 (ENSMOCG00000010785) #8 Nras (ENSMOCG00000022441) #9 Csde1 (ENSMOCG00000018960) #10 ENSMOCG00000009367 Sike1 (ENSMOCG00000000516) #11 Nr1h5 (ENSMOCG00000012316) #12 Sycp1 (ENSMOCG00000009622) #13 Tshb (ENSMOCG00000006126) #14 Tspan2 (ENSMOCG00000003591) #15 Ngf (ENSMOCG00000021179) #16 Vangl1 (ENSMOCG00000018281) #17 Casq2 (ENSMOCG00000014851) #18 Nhlh2 (ENSMOCG00000007572) #19 ENSMOCG00000020465 #20 Mab21l3 (ENSMOCG00000016617) #21 Atp1a1 (ENSMOCG00000006963) #22 Igsf3 (ENSMOCG00000005813) #23 Ptgfrn (ENSMOCG00000020768) #25 Ttf2 (ENSMOCG00000008415) Trim45 (ENSMOCG00000000422) #29 Vtcn1 (ENSMOCG00000000748) #30 Man1a2 (ENSMOCG00000020901) #31 Tent5c (ENSMOCG00000018840) #32 Gdap2 (ENSMOCG00000011700) #33 Wdr3 (ENSMOCG00000014361) #34 Spag17 (ENSMOCG00000001590) #35 ENSMOCG00000009935 Tbx15 (ENSMOCG00000012596) #36 Wars2 (ENSMOCG00000005144) #37 ENSMOCG00000020989 ENSMOCG00000020634 Cricetinae ANCESTRAL SPECIES 12 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000165376 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Chinese hamster chok1gshd MODERN SPECIES 66 Nras (ENSCGRG00001020093) #9 ENSCGRG00001016833 #10 ENSCGRG00001011859 Sike1 (ENSCGRG00001023509) #11 Nr1h5 (ENSCGRG00001022882) #12 Sycp1 (ENSCGRG00001010102) #13 ENSCGRG00001006375 Tshb (ENSCGRG00001012202) #14 Tspan2 (ENSCGRG00001014655) #15 Ngf (ENSCGRG00001000250) #16 Vangl1 (ENSCGRG00001022127) #17 Casq2 (ENSCGRG00001013746) #18 Nhlh2 (ENSCGRG00001009328) #19 Slc22a15 (ENSCGRG00001018525) #20 Mab21l3 (ENSCGRG00001018373) #21 Atp1a1 (ENSCGRG00001024330) #22 Igsf3 (ENSCGRG00001017829) #23 Cd2 (ENSCGRG00001019348) #24 Ptgfrn (ENSCGRG00001022148) #25 Cd101 (ENSCGRG00001024359) #26 ENSCGRG00001006277 Trim45 (ENSCGRG00001000157) #29 Vtcn1 (ENSCGRG00001015357) #30 Man1a2 (ENSCGRG00001020266) #31 Tent5c (ENSCGRG00001005586) #32 Gdap2 (ENSCGRG00001012369) #33 Wdr3 (ENSCGRG00001019544) #34 Spag17 (ENSCGRG00001013560) #35 Tbx15 (ENSCGRG00001024224) #36 Wars2 (ENSCGRG00001018718) #37 Hao2 (ENSCGRG00001020203) Golden Hamster MODERN SPECIES 681 Ampd1 (ENSMAUG00000001096) #8 Nras (ENSMAUG00000019927) #9 Csde1 (ENSMAUG00000014031) #10 Sike1 (ENSMAUG00000012482) #11 Nr1h5 (ENSMAUG00000010803) #12 Sycp1 (ENSMAUG00000000328) #13 Tshb (ENSMAUG00000005156) #14 Tspan2 (ENSMAUG00000004539) #15 ENSMAUG00000002276 #16 Vangl1 (ENSMAUG00000009480) #17 Casq2 (ENSMAUG00000000284) #18 Nhlh2 (ENSMAUG00000016936) #19 Slc22a15 (ENSMAUG00000010758) #20 Mab21l3 (ENSMAUG00000009568) #21 ENSMAUG00000008452 Atp1a1 (ENSMAUG00000017136) #22 ENSMAUG00000017849 Igsf3 (ENSMAUG00000013987) #23 Cd2 (ENSMAUG00000012774) #24 Ptgfrn (ENSMAUG00000002851) #25 Cd101 (ENSMAUG00000017674) #26 ENSMAUG00000016725 Trim45 (ENSMAUG00000013623) #29 Vtcn1 (ENSMAUG00000015061) #30 Man1a2 (ENSMAUG00000000417) #31 Tent5c (ENSMAUG00000017728) #32 ENSMAUG00000017297 Gdap2 (ENSMAUG00000014132) #33 Wdr3 (ENSMAUG00000002574) #34 Spag17 (ENSMAUG00000008022) #35 Murinae ANCESTRAL SPECIES 5 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Mus ANCESTRAL SPECIES 7 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Mus_A ANCESTRAL SPECIES 9 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Mus_B ANCESTRAL SPECIES 8 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Mouse MODERN SPECIES 12 Dennd2c (ENSMUSG00000007379) #7 Ampd1 (ENSMUSG00000070385) #8 Nras (ENSMUSG00000027852) #9 Csde1 (ENSMUSG00000068823) #10 Sike1 (ENSMUSG00000027854) #11 Nr1h5 (ENSMUSG00000048938) #12 Sycp1 (ENSMUSG00000027855) #13 Tshb (ENSMUSG00000027857) #14 Tspan2 (ENSMUSG00000027858) #15 Ngf (ENSMUSG00000027859) #16 Vangl1 (ENSMUSG00000027860) #17 Casq2 (ENSMUSG00000027861) #18 Nhlh2 (ENSMUSG00000048540) #19 Slc22a15 (ENSMUSG00000033147) #20 Mab21l3 (ENSMUSG00000044313) #21 Atp1a1 (ENSMUSG00000033161) #22 Igsf3 (ENSMUSG00000042035) #23 Cd2 (ENSMUSG00000027863) #24 Ptgfrn (ENSMUSG00000027864) #25 Cd101 (ENSMUSG00000086564) #26 Ttf2 (ENSMUSG00000033222) Trim45 (ENSMUSG00000033233) #29 Vtcn1 (ENSMUSG00000051076) #30 Man1a2 (ENSMUSG00000008763) #31 Tent5c (ENSMUSG00000044468) #32 Gdap2 (ENSMUSG00000027865) #33 Wdr3 (ENSMUSG00000033285) #34 Spag17 (ENSMUSG00000027867) #35 Tbx15 (ENSMUSG00000027868) #36 Wars2 (ENSMUSG00000004233) #37 Hao2 (ENSMUSG00000027870) Mus_C ANCESTRAL SPECIES 6 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b spretus MODERN SPECIES 12 Dennd2c (MGP_SPRETEiJ_G0026397) #7 Ampd1 (MGP_SPRETEiJ_G0026396) #8 Nras (MGP_SPRETEiJ_G0026395) #9 Csde1 (MGP_SPRETEiJ_G0026394) #10 Sike1 (MGP_SPRETEiJ_G0026393) #11 Nr1h5 (MGP_SPRETEiJ_G0026392) #12 Sycp1 (MGP_SPRETEiJ_G0026391) #13 Tshb (MGP_SPRETEiJ_G0026390) #14 Tspan2 (MGP_SPRETEiJ_G0026389) #15 Ngf (MGP_SPRETEiJ_G0026388) #16 Vangl1 (MGP_SPRETEiJ_G0026387) #17 Casq2 (MGP_SPRETEiJ_G0026386) #18 Nhlh2 (MGP_SPRETEiJ_G0026385) #19 Slc22a15 (MGP_SPRETEiJ_G0026384) #20 Mab21l3 (MGP_SPRETEiJ_G0026383) #21 Atp1a1 (MGP_SPRETEiJ_G0026382) #22 Igsf3 (MGP_SPRETEiJ_G0026381) #23 Cd2 (MGP_SPRETEiJ_G0026380) #24 Ptgfrn (MGP_SPRETEiJ_G0026379) #25 Cd101 (MGP_SPRETEiJ_G0026378) #26 Ttf2 (MGP_SPRETEiJ_G0026377) Trim45 (MGP_SPRETEiJ_G0026376) #29 Vtcn1 (MGP_SPRETEiJ_G0026375) #30 Man1a2 (MGP_SPRETEiJ_G0026374) #31 Tent5c (MGP_SPRETEiJ_G0026373) #32 Gdap2 (MGP_SPRETEiJ_G0026372) #33 Wdr3 (MGP_SPRETEiJ_G0026371) #34 Spag17 (MGP_SPRETEiJ_G0026370) #35 Tbx15 (MGP_SPRETEiJ_G0026369) #36 Wars2 (MGP_SPRETEiJ_G0026368) #37 Hao2 (MGP_SPRETEiJ_G0026367) Steppe mouse MODERN SPECIES 3036 Casq2 (ENSMSIG00000017951) #18 ENSMSIG00000017944 Nhlh2 (ENSMSIG00000017937) #19 Slc22a15 (ENSMSIG00000017867) #20 Mab21l3 (ENSMSIG00000017843) #21 ENSMSIG00000017831 Atp1a1 (ENSMSIG00000017781) #22 Igsf3 (ENSMSIG00000017718) #23 Cd2 (ENSMSIG00000017692) #24 Ptgfrn (ENSMSIG00000017639) #25 Cd101 (ENSMSIG00000017562) #26 Ttf2 (ENSMSIG00000017516) ENSMSIG00000017406 #29 Vtcn1 (ENSMSIG00000017388) #30 Man1a2 (ENSMSIG00000017361) #31 Tent5c (ENSMSIG00000017352) #32 Ryukyu mouse MODERN SPECIES 12 Dennd2c (MGP_CAROLIEiJ_G0025447) #7 Ampd1 (MGP_CAROLIEiJ_G0025446) #8 Nras (MGP_CAROLIEiJ_G0025445) #9 Csde1 (MGP_CAROLIEiJ_G0025444) #10 Sike1 (MGP_CAROLIEiJ_G0025443) #11 Nr1h5 (MGP_CAROLIEiJ_G0025442) #12 MGP_CAROLIEiJ_G0025441 ##13 Tshb (MGP_CAROLIEiJ_G0025440) #14 Tspan2 (MGP_CAROLIEiJ_G0025439) #15 Ngf (MGP_CAROLIEiJ_G0025438) #16 Vangl1 (MGP_CAROLIEiJ_G0025437) #17 Casq2 (MGP_CAROLIEiJ_G0025436) #18 Nhlh2 (MGP_CAROLIEiJ_G0025435) #19 Slc22a15 (MGP_CAROLIEiJ_G0025434) #20 Mab21l3 (MGP_CAROLIEiJ_G0025433) #21 Atp1a1 (MGP_CAROLIEiJ_G0025432) #22 Igsf3 (MGP_CAROLIEiJ_G0025431) #23 Cd2 (MGP_CAROLIEiJ_G0025430) #24 Ptgfrn (MGP_CAROLIEiJ_G0025429) #25 Cd101 (MGP_CAROLIEiJ_G0025428) #26 Ttf2 (MGP_CAROLIEiJ_G0025427) MGP_CAROLIEiJ_G0025426 #29 Vtcn1 (MGP_CAROLIEiJ_G0025425) #30 Man1a2 (MGP_CAROLIEiJ_G0025424) #31 Tent5c (MGP_CAROLIEiJ_G0025423) #32 Gdap2 (MGP_CAROLIEiJ_G0025422) #33 Wdr3 (MGP_CAROLIEiJ_G0025421) #34 Spag17 (MGP_CAROLIEiJ_G0025420) #35 Tbx15 (MGP_CAROLIEiJ_G0025419) #36 MGP_CAROLIEiJ_G0025418 Hao2 (MGP_CAROLIEiJ_G0025417) Shrew mouse MODERN SPECIES 17 Dennd2c (MGP_PahariEiJ_G0026891) #7 Ampd1 (MGP_PahariEiJ_G0026890) #8 Nras (MGP_PahariEiJ_G0026889) #9 Csde1 (MGP_PahariEiJ_G0026888) #10 Sike1 (MGP_PahariEiJ_G0026887) #11 Nr1h5 (MGP_PahariEiJ_G0026886) #12 Sycp1 (MGP_PahariEiJ_G0026885) #13 Tshb (MGP_PahariEiJ_G0026884) #14 Tspan2 (MGP_PahariEiJ_G0026883) #15 Ngf (MGP_PahariEiJ_G0026882) #16 Vangl1 (MGP_PahariEiJ_G0026881) #17 Casq2 (MGP_PahariEiJ_G0026880) #18 Nhlh2 (MGP_PahariEiJ_G0026879) #19 Slc22a15 (MGP_PahariEiJ_G0026878) #20 Mab21l3 (MGP_PahariEiJ_G0026877) #21 Atp1a1 (MGP_PahariEiJ_G0026876) #22 Igsf3 (MGP_PahariEiJ_G0026875) #23 Cd2 (MGP_PahariEiJ_G0026874) #24 Ptgfrn (MGP_PahariEiJ_G0026873) #25 Cd101 (MGP_PahariEiJ_G0026872) #26 Ttf2 (MGP_PahariEiJ_G0026871) MGP_PahariEiJ_G0026870 #29 Vtcn1 (MGP_PahariEiJ_G0026869) #30 Man1a2 (MGP_PahariEiJ_G0026868) #31 Tent5c (MGP_PahariEiJ_G0026867) #32 Gdap2 (MGP_PahariEiJ_G0026866) #33 Wdr3 (MGP_PahariEiJ_G0026865) #34 Spag17 (MGP_PahariEiJ_G0026864) #35 Tbx15 (MGP_PahariEiJ_G0026863) #36 Wars2 (MGP_PahariEiJ_G0026862) #37 Hao2 (MGP_PahariEiJ_G0026861) Rat MODERN SPECIES 11 Dennd2c (ENSRNOG00000018716) #7 Ampd1 (ENSRNOG00000018656) #8 Nras (ENSRNOG00000023079) #9 Csde1 (ENSRNOG00000061058) #10 Sike1 (ENSRNOG00000017502) #11 Nr1h5 (ENSRNOG00000023073) #12 Sycp1 (ENSRNOG00000016835) #13 Tshb (ENSRNOG00000016793) #14 Tspan2 (ENSRNOG00000023338) #15 Ngf (ENSRNOG00000016571) #16 Vangl1 (ENSRNOG00000016477) #17 Casq2 (ENSRNOG00000016243) #18 Nhlh2 (ENSRNOG00000054375) #19 Slc22a15 (ENSRNOG00000033051) #20 Mab21l3 (ENSRNOG00000016044) #21 Atp1a1 (ENSRNOG00000030019) #22 Igsf3 (ENSRNOG00000023851) #23 Cd2 (ENSRNOG00000015821) #24 ENSRNOG00000069649 Ptgfrn (ENSRNOG00000015655) #25 Cd101 (ENSRNOG00000037190) #26 Ttf2 (ENSRNOG00000057761) Trim45 (ENSRNOG00000015347) #29 Vtcn1 (ENSRNOG00000015279) #30 ENSRNOG00000067753 Man1a2 (ENSRNOG00000015226) #31 Tent5c (ENSRNOG00000070242) #32 Gdap2 (ENSRNOG00000019754) #33 Wdr3 (ENSRNOG00000019670) #34 Spag17 (ENSRNOG00000037196) #35 Tbx15 (ENSRNOG00000019565) #36 Upper Galilee mountains blind mole rat MODERN SPECIES 868 Dennd2c (ENSNGAG00000023499) #7 Ampd1 (ENSNGAG00000023553) #8 Nras (ENSNGAG00000007289) #9 ENSNGAG00000021929 #10 Sike1 (ENSNGAG00000016770) #11 Nr1h5 (ENSNGAG00000010800) #12 Sycp1 (ENSNGAG00000012549) #13 Tshb (ENSNGAG00000001574) #14 Tspan2 (ENSNGAG00000014905) #15 Ngf (ENSNGAG00000018398) #16 Vangl1 (ENSNGAG00000021078) #17 Casq2 (ENSNGAG00000012360) #18 Nhlh2 (ENSNGAG00000022644) #19 ENSNGAG00000017546 #20 Mab21l3 (ENSNGAG00000013724) #21 Atp1a1 (ENSNGAG00000022692) #22 Igsf3 (ENSNGAG00000024078) #23 Cd2 (ENSNGAG00000015298) #24 Lesser Egyptian jerboa MODERN SPECIES 144 Ampd1 (ENSJJAG00000021675) #8 ENSJJAG00000020941 #9 Csde1 (ENSJJAG00000019571) #10 ENSJJAG00000019089 #11 Nr1h5 (ENSJJAG00000018578) #12 ENSJJAG00000018067 #13 Tshb (ENSJJAG00000001329) #14 Tspan2 (ENSJJAG00000000832) #15 Ngf (ENSJJAG00000022901) #16 ENSJJAG00000021722 Vangl1 (ENSJJAG00000021462) #17 Casq2 (ENSJJAG00000020862) #18 Nhlh2 (ENSJJAG00000019983) #19 Slc22a15 (ENSJJAG00000000255) #20 Mab21l3 (ENSJJAG00000022482) #21 Atp1a1 (ENSJJAG00000020791) #22 Igsf3 (ENSJJAG00000017489) #23 Cd2 (ENSJJAG00000019842) #24 Ptgfrn (ENSJJAG00000019616) #25 Ttf2 (ENSJJAG00000015225) Trim45 (ENSJJAG00000007227) #29 Vtcn1 (ENSJJAG00000019207) #30 ENSJJAG00000018170 Man1a2 (ENSJJAG00000017865) #31 Tent5c (ENSJJAG00000013174) #32 ENSJJAG00000017333 ENSJJAG00000014767 ENSJJAG00000013768 ENSJJAG00000013505 #33 Wdr3 (ENSJJAG00000013861) #34 Spag17 (ENSJJAG00000008428) #35 Kangaroo rat MODERN SPECIES 397 Bcas2 (ENSDORG00000014220) Dennd2c (ENSDORG00000014222) #7 Ampd1 (ENSDORG00000005377) #8 Nras (ENSDORG00000025267) #9 Csde1 (ENSDORG00000011609) #10 Sike1 (ENSDORG00000005162) #11 ENSDORG00000027896 #13 Tshb (ENSDORG00000003238) #14 Tspan2 (ENSDORG00000003239) #15 Ngf (ENSDORG00000025001) #16 Vangl1 (ENSDORG00000013118) #17 Casq2 (ENSDORG00000013122) #18 ENSDORG00000010026 #20 ENSDORG00000028402 #20 Mab21l3 (ENSDORG00000010259) #21 Atp1a1 (ENSDORG00000028959) #22 Igsf3 (ENSDORG00000010085) #23 Ptgfrn (ENSDORG00000013777) #25 Cd101 (ENSDORG00000013779) #26 Ttf2 (ENSDORG00000013781) Vtcn1 (ENSDORG00000013786) #30 Man1a2 (ENSDORG00000025695) #31 Tent5c (ENSDORG00000010159) #32 Gdap2 (ENSDORG00000001079) #33 Wdr3 (ENSDORG00000011031) #34 Spag17 (ENSDORG00000011032) #35 ENSDORG00000023254 Tbx15 (ENSDORG00000005620) #36 Wars2 (ENSDORG00000008562) #37 Hao2 (ENSDORG00000003236) ENSDORG00000007977 Rodentia_A ANCESTRAL SPECIES ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Sciuridae ANCESTRAL SPECIES ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Marmotini ANCESTRAL SPECIES 62 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Marmotini_b ANCESTRAL SPECIES 74 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Squirrel MODERN SPECIES 227 AMPD1 (ENSSTOG00000015082) #8 NRAS (ENSSTOG00000023151) #9 ENSSTOG00000032722 #10 SIKE1 (ENSSTOG00000001684) #11 ENSSTOG00000027072 #12 ENSSTOG00000010304 #13 TSHB (ENSSTOG00000022113) #14 TSPAN2 (ENSSTOG00000020353) #15 NGF (ENSSTOG00000005518) #16 VANGL1 (ENSSTOG00000015734) #17 CASQ2 (ENSSTOG00000015738) #18 NHLH2 (ENSSTOG00000019698) #19 SLC22A15 (ENSSTOG00000016141) #20 MAB21L3 (ENSSTOG00000026516) #21 ATP1A1 (ENSSTOG00000016127) #22 IGSF3 (ENSSTOG00000022906) #23 CD2 (ENSSTOG00000004188) #24 PTGFRN (ENSSTOG00000010916) #25 CD101 (ENSSTOG00000010919) #26 TTF2 (ENSSTOG00000010927) ENSSTOG00000034928 TRIM45 (ENSSTOG00000007369) #29 VTCN1 (ENSSTOG00000007389) #30 MAN1A2 (ENSSTOG00000016016) #31 TENT5C (ENSSTOG00000010392) #32 GDAP2 (ENSSTOG00000024699) #33 WDR3 (ENSSTOG00000003504) #34 SPAG17 (ENSSTOG00000003532) #35 TBX15 (ENSSTOG00000013040) #36 WARS2 (ENSSTOG00000013051) #37 Arctic ground squirrel MODERN SPECIES 134 DENND2C (ENSUPAG00010022334) #7 AMPD1 (ENSUPAG00010022337) #8 NRAS (ENSUPAG00010022339) #9 CSDE1 (ENSUPAG00010022340) #10 SIKE1 (ENSUPAG00010022488) #11 ENSUPAG00010022495 #12 SYCP1 (ENSUPAG00010022501) #13 TSHB (ENSUPAG00010022509) #14 TSPAN2 (ENSUPAG00010022515) #15 NGF (ENSUPAG00010022522) #16 VANGL1 (ENSUPAG00010022525) #17 CASQ2 (ENSUPAG00010022531) #18 NHLH2 (ENSUPAG00010022533) #19 SLC22A15 (ENSUPAG00010022536) #20 MAB21L3 (ENSUPAG00010022542) #21 ATP1A1 (ENSUPAG00010022544) #22 Alpin marmot MODERN SPECIES 79 NRAS (ENSMMMG00000014434) #9 CSDE1 (ENSMMMG00000014448) #10 SIKE1 (ENSMMMG00000014866) #11 ENSMMMG00000014870 ENSMMMG00000014879 #12 SYCP1 (ENSMMMG00000014892) #13 ENSMMMG00000014952 TSHB (ENSMMMG00000014957) #14 TSPAN2 (ENSMMMG00000014968) #15 NGF (ENSMMMG00000014973) #16 VANGL1 (ENSMMMG00000014977) #17 CASQ2 (ENSMMMG00000014991) #18 NHLH2 (ENSMMMG00000015011) #19 SLC22A15 (ENSMMMG00000015020) #20 MAB21L3 (ENSMMMG00000015051) #21 ATP1A1 (ENSMMMG00000015066) #22 IGSF3 (ENSMMMG00000015107) #23 CD2 (ENSMMMG00000015127) #24 PTGFRN (ENSMMMG00000015141) #25 CD101 (ENSMMMG00000015154) #26 TTF2 (ENSMMMG00000015196) ENSMMMG00000015205 TRIM45 (ENSMMMG00000015213) #29 VTCN1 (ENSMMMG00000015255) #30 MAN1A2 (ENSMMMG00000015283) #31 TENT5C (ENSMMMG00000015304) #32 GDAP2 (ENSMMMG00000015308) #33 WDR3 (ENSMMMG00000015336) #34 ENSMMMG00000015354 #35 TBX15 (ENSMMMG00000015373) #36 WARS2 (ENSMMMG00000015379) #37 Eurasian red squirrel MODERN SPECIES AMPD1 (ENSSVLG00005000465) #8 ENSSVLG00005000492 #9 CSDE1 (ENSSVLG00005000559) #10 SIKE1 (ENSSVLG00005000707) #11 ENSSVLG00005000743 #12 SYCP1 (ENSSVLG00005000819) #13 TSHB (ENSSVLG00005000935) #14 TSPAN2 (ENSSVLG00005000967) #15 NGF (ENSSVLG00005001008) #16 ENSSVLG00005001021 VANGL1 (ENSSVLG00005001032) #17 CASQ2 (ENSSVLG00005001056) #18 NHLH2 (ENSSVLG00005001085) #19 SLC22A15 (ENSSVLG00005001098) #20 MAB21L3 (ENSSVLG00005001135) #21 ATP1A1 (ENSSVLG00005001182) #22 ENSSVLG00005001215 IGSF3 (ENSSVLG00005001236) #23 CD2 (ENSSVLG00005001265) #24 PTGFRN (ENSSVLG00005001283) #25 CD101 (ENSSVLG00005001302) #26 ENSSVLG00005001327 ENSSVLG00005001350 TRIM45 (ENSSVLG00005001388) #29 VTCN1 (ENSSVLG00005001433) #30 MAN1A2 (ENSSVLG00005001469) #31 TENT5C (ENSSVLG00005001495) #32 GDAP2 (ENSSVLG00005001518) #33 ENSSVLG00005001561 WDR3 (ENSSVLG00005001572) #34 ENSSVLG00005001591 #35 Hystricomorpha ANCESTRAL SPECIES 23 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A.i #37 ENSGT00390000018717.b.a.b Naked mole-rat female MODERN SPECIES 10 CSDE1 (ENSHGLG00000009620) #10 SIKE1 (ENSHGLG00000015408) #11 ENSHGLG00000032648 ENSHGLG00000004974 #12 ENSHGLG00000047308 ENSHGLG00000006103 #13 TSHB (ENSHGLG00000014600) #14 TSPAN2 (ENSHGLG00000010786) #15 NGF (ENSHGLG00000044577) #16 ENSHGLG00000032979 VANGL1 (ENSHGLG00000016399) #17 CASQ2 (ENSHGLG00000038257) #18 NHLH2 (ENSHGLG00000046588) #19 SLC22A15 (ENSHGLG00000011061) #20 MAB21L3 (ENSHGLG00000009205) #21 ATP1A1 (ENSHGLG00000009304) #22 IGSF3 (ENSHGLG00000018539) #23 CD2 (ENSHGLG00000014947) #24 PTGFRN (ENSHGLG00000019106) #25 CD101 (ENSHGLG00000018298) #26 TTF2 (ENSHGLG00000012459) TRIM45 (ENSHGLG00000017735) #29 VTCN1 (ENSHGLG00000018792) #30 ENSHGLG00000045985 MAN1A2 (ENSHGLG00000017646) #31 FAM46C (ENSHGLG00000043157) #32 ENSHGLG00000041120 ENSHGLG00000017537 #33 WDR3 (ENSHGLG00000017936) #34 SPAG17 (ENSHGLG00000009162) #35 ENSHGLG00000032534 Hystricomorpha_a ANCESTRAL SPECIES 14 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000164746 #28 ENSGT00940000167338 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A.i #37 Guinea pig MODERN SPECIES 2 DENND2C (ENSCPOG00000012944) #7 AMPD1 (ENSCPOG00000002591) #8 NRAS (ENSCPOG00000021833) #9 CSDE1 (ENSCPOG00000040388) #10 SIKE1 (ENSCPOG00000007406) #11 ENSCPOG00000009115 SYCP1 (ENSCPOG00000012690) #13 TSHB (ENSCPOG00000030694) #14 TSPAN2 (ENSCPOG00000008376) #15 NGF (ENSCPOG00000024033) #16 VANGL1 (ENSCPOG00000001701) #17 CASQ2 (ENSCPOG00000001703) #18 NHLH2 (ENSCPOG00000026593) #19 SLC22A15 (ENSCPOG00000009506) #20 MAB21L3 (ENSCPOG00000009511) #21 ATP1A1 (ENSCPOG00000000927) #22 IGSF3 (ENSCPOG00000002029) #23 CD2 (ENSCPOG00000036418) #24 PTGFRN (ENSCPOG00000015740) #25 CD101 (ENSCPOG00000015741) #26 ENSCPOG00000000605 #28 VTCN1 (ENSCPOG00000034001) #30 MAN1A2 (ENSCPOG00000004935) #31 TENT5C (ENSCPOG00000035573) #32 GDAP2 (ENSCPOG00000012599) #33 WDR3 (ENSCPOG00000011305) #34 SPAG17 (ENSCPOG00000011317) #35 TBX15 (ENSCPOG00000000615) #36 WARS2 (ENSCPOG00000000616) #37 ENSCPOG00000001451 ENSCPOG00000033437 Hystricomorpha_b ANCESTRAL SPECIES 6 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.d #13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000167338 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A.i #37 ENSGT00390000018717.b.a.b Long-tailed chinchilla MODERN SPECIES 142 AMPD1 (ENSCLAG00000006645) #8 NRAS (ENSCLAG00000005888) #9 CSDE1 (ENSCLAG00000006618) #10 SIKE1 (ENSCLAG00000005344) #11 ENSCLAG00000006997 ENSCLAG00000013132 #12 ENSCLAG00000004900 ##13 TSHB (ENSCLAG00000011105) #14 TSPAN2 (ENSCLAG00000007865) #15 NGF (ENSCLAG00000004815) #16 VANGL1 (ENSCLAG00000006270) #17 CASQ2 (ENSCLAG00000007972) #18 NHLH2 (ENSCLAG00000005691) #19 SLC22A15 (ENSCLAG00000006619) #20 MAB21L3 (ENSCLAG00000004428) #21 ATP1A1 (ENSCLAG00000005733) #22 IGSF3 (ENSCLAG00000006923) #23 CD2 (ENSCLAG00000007838) #24 PTGFRN (ENSCLAG00000008229) #25 CD101 (ENSCLAG00000010019) #26 ENSCLAG00000014230 TRIM45 (ENSCLAG00000010898) #29 VTCN1 (ENSCLAG00000014982) #30 MAN1A2 (ENSCLAG00000008573) #31 TENT5C (ENSCLAG00000006985) #32 ENSCLAG00000007247 GDAP2 (ENSCLAG00000008843) #33 WDR3 (ENSCLAG00000010657) #34 SPAG17 (ENSCLAG00000006388) #35 TBX15 (ENSCLAG00000008292) #36 WARS2 (ENSCLAG00000004926) #37 Degu MODERN SPECIES 181 ENSODEG00000007383 #10 SIKE1 (ENSODEG00000007343) #11 ENSODEG00000010107 #12 SYCP1 (ENSODEG00000006927) #13 TSHB (ENSODEG00000009005) #14 TSPAN2 (ENSODEG00000007319) #15 NGF (ENSODEG00000006538) #16 ENSODEG00000006379 ENSODEG00000008957 ENSODEG00000008559 VANGL1 (ENSODEG00000010599) #17 CASQ2 (ENSODEG00000009014) #18 NHLH2 (ENSODEG00000008157) #19 SLC22A15 (ENSODEG00000007565) #20 MAB21L3 (ENSODEG00000005924) #21 ATP1A1 (ENSODEG00000006810) #22 ENSODEG00000006132 IGSF3 (ENSODEG00000007439) #23 ENSODEG00000006855 PTGFRN (ENSODEG00000006807) #25 CD101 (ENSODEG00000006286) #26 ENSODEG00000006362 TRIM45 (ENSODEG00000007020) #29 VTCN1 (ENSODEG00000006757) #30 MAN1A2 (ENSODEG00000005674) #31 TENT5C (ENSODEG00000006187) #32 ENSODEG00000005813 Lagomorpha ANCESTRAL SPECIES 1 ENSGT00950000182931.B.a.b #7 ENSGT00950000183011.c.a.a #8 ENSGT00940000158947 #9 ENSGT00390000016950 #10 ENSGT00390000018003.a #11 ENSGT00940000163318 #12 ENSGT00390000003368.c.b ##13 ENSGT00940000158152 #14 ENSGT00940000157504 #15 ENSGT00390000007725.A.b #16 ENSGT00390000012496.a #17 ENSGT00390000019377.b #18 ENSGT00940000162602 #19 ENSGT00940000160364 #20 ENSGT01050000244827.B #21 ENSGT00940000154840.b #22 ENSGT00940000155177.b #23 ENSGT01030000234540.E #24 ENSGT00940000158367 #25 ENSGT00940000161722 #26 ENSGT00940000162718 ENSGT00940000154334.k #29 ENSGT00940000157300 #30 ENSGT00940000157498 #31 ENSGT00940000158856 #32 ENSGT00940000156336 #33 ENSGT00940000153859.a #34 ENSGT00390000013693 #35 ENSGT00940000159013 #36 ENSGT00940000153724.A #37 ENSGT00390000018717.b.a.b Rabbit MODERN SPECIES 4 DENND2C (ENSOCUG00000016789) #7 AMPD1 (ENSOCUG00000016424) #8 NRAS (ENSOCUG00000022455) #9 CSDE1 (ENSOCUG00000016438) #10 SIKE1 (ENSOCUG00000016457) #11 ENSOCUG00000023188 #12 ENSOCUG00000022499 ENSOCUG00000016463 ##13 Tshb (ENSOCUG00000023876) #14 TSPAN2 (ENSOCUG00000001279) #15 NGF (ENSOCUG00000000659) #16 VANGL1 (ENSOCUG00000016240) #17 CASQ2 (ENSOCUG00000010594) #18 SLC22A15 (ENSOCUG00000015370) #20 MAB21L3 (ENSOCUG00000015382) #21 ATP1A1 (ENSOCUG00000001324) #22 IGSF3 (ENSOCUG00000005284) #23 CD2 (ENSOCUG00000008474) #24 PTGFRN (ENSOCUG00000000608) #25 CD101 (ENSOCUG00000000612) #26 TTF2 (ENSOCUG00000000613) TRIM45 (ENSOCUG00000000237) #29 VTCN1 (ENSOCUG00000026343) #30 MAN1A2 (ENSOCUG00000012648) #31 ENSOCUG00000026654 ENSOCUG00000027717 GDAP2 (ENSOCUG00000007568) #33 WDR3 (ENSOCUG00000007572) #34 SPAG17 (ENSOCUG00000007586) #35 TBX15 (ENSOCUG00000012320) #36 WARS2 (ENSOCUG00000012330) #37 Pika MODERN SPECIES 2757 ENSOPRG00000006712 #22 ENSOPRG00000006746 ENSOPRG00000006754 #23 ENSOPRG00000006760 ENSOPRG00000006767 #24 Tree shrew MODERN SPECIES 3085 ATP1A1 (ENSTBEG00000010568) #22