Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00940000153665.b.a.b	ENSGT00500000045816	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000155173 #32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889	ENSGT00390000007310	ENSGT00940000160589
Glires	ANCESTRAL SPECIES		ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00940000153665.b.a.b	ENSGT00500000045816	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000155173 #32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889	ENSGT00390000007310	ENSGT00940000160589
Rodentia	ANCESTRAL SPECIES		ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00500000045816	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570 #29	ENSGT00940000155173.f.b.a ##32	ENSGT00940000155173.f.a #32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889
Rodentia_A	ANCESTRAL SPECIES		ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00500000045816	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570 #29	ENSGT00940000155173.f.a #32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889	ENSGT00390000007310
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00940000153665.b.a.b	ENSGT00500000045816	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.c #29	ENSGT00940000155173.f.a.a #32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889	ENSGT00390000007310	ENSGT00940000160589
Marmotini	ANCESTRAL SPECIES		ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00960000189628 #20	ENSGT00940000153665.b.a.b	ENSGT00500000045816	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.c #29	ENSGT00940000163570.d #30	ENSGT00940000155173.f.a.a #32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889	ENSGT00390000007310
Marmotini_b	ANCESTRAL SPECIES		ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00960000189628 #20	ENSGT00940000153665.b.a.b	ENSGT00500000045816	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.c #29	ENSGT00940000163570.d #30	ENSGT00940000155173.f.a.a #32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889	ENSGT00390000007310
Arctic ground squirrel	MODERN SPECIES	190	CCDC17 (ENSUPAG00010020667) #7	GPBP1L1 (ENSUPAG00010020630) #8	TMEM69 (ENSUPAG00010020622) #9	IPP (ENSUPAG00010020604) #10	MAST2 (ENSUPAG00010020550) #11	PIK3R3 (ENSUPAG00010020507) #12	P3R3URF (ENSUPAG00010020503) #13	TSPAN1 (ENSUPAG00010020497) #14	POMGNT1 (ENSUPAG00010020423) #15	LURAP1 (ENSUPAG00010020417) #16	RAD54L (ENSUPAG00010020396) #17	LRRC41 (ENSUPAG00010020390) #18	ENSUPAG00010020383 #19	ENSUPAG00010020379 #20	FAAH (ENSUPAG00010020365) #21	DMBX1 (ENSUPAG00010020359) #22	TMEM275 (ENSUPAG00010020356) #23	KNCN (ENSUPAG00010020353) #24	ENSUPAG00010020341 #25	MOB3C (ENSUPAG00010020338) #26	ATPAF1 (ENSUPAG00010020324) #27	EFCAB14 (ENSUPAG00010020294) #28	ENSUPAG00010020267 #29	ENSUPAG00010020244 #30	CYP4B1 (ENSUPAG00010020229) #31	ENSUPAG00010019981 #32
Squirrel	MODERN SPECIES	74	GPBP1L1 (ENSSTOG00000013491) #8	TMEM69 (ENSSTOG00000032547) #9	IPP (ENSSTOG00000013503) #10	MAST2 (ENSSTOG00000006001) #11	PIK3R3 (ENSSTOG00000006051) #12	P3R3URF (ENSSTOG00000033389) #13	TSPAN1 (ENSSTOG00000026291) #14	POMGNT1 (ENSSTOG00000009283) #15	LURAP1 (ENSSTOG00000009276) #16	RAD54L (ENSSTOG00000029125) #17	LRRC41 (ENSSTOG00000029075) #18	ENSSTOG00000033129	NSUN4 (ENSSTOG00000009794)	ENSSTOG00000033959	FAAH (ENSSTOG00000011655) #21	DMBX1 (ENSSTOG00000011661) #22	KNCN (ENSSTOG00000026559) #24	ENSSTOG00000032933	MOB3C (ENSSTOG00000005399) #26	ATPAF1 (ENSSTOG00000005415) #27	ENSSTOG00000030628	EFCAB14 (ENSSTOG00000016250) #28	CYP4B1 (ENSSTOG00000001409) #31	ENSSTOG00000013550 #29	ENSSTOG00000028206 #32	ENSSTOG00000015913 #32	CYP4X1 (ENSSTOG00000013556)	PDZK1IP1 (ENSSTOG00000024038)	TAL1 (ENSSTOG00000008396)	STIL (ENSSTOG00000014333)	CMPK1 (ENSSTOG00000007706)
Alpin marmot	MODERN SPECIES	15	CCDC17 (ENSMMMG00000019165) #7	GPBP1L1 (ENSMMMG00000019162) #8	TMEM69 (ENSMMMG00000019157) #9	IPP (ENSMMMG00000019149) #10	MAST2 (ENSMMMG00000019002) #11	PIK3R3 (ENSMMMG00000018977) #12	P3R3URF (ENSMMMG00000018949) #13	TSPAN1 (ENSMMMG00000018942) #14	POMGNT1 (ENSMMMG00000018549) #15	LURAP1 (ENSMMMG00000018543) #16	RAD54L (ENSMMMG00000018505) #17	LRRC41 (ENSMMMG00000018495) #18	ENSMMMG00000018488 #19	ENSMMMG00000018486 #20	FAAH (ENSMMMG00000018402) #21	DMBX1 (ENSMMMG00000018386) #22	TMEM275 (ENSMMMG00000018381) #23	KNCN (ENSMMMG00000018376) #24	ENSMMMG00000018347 #25	MOB3C (ENSMMMG00000018342) #26	ATPAF1 (ENSMMMG00000018290) #27	EFCAB14 (ENSMMMG00000018258) #28	CYP4B1 (ENSMMMG00000018250) #31	ENSMMMG00000018229 #30	ENSMMMG00000018225	ENSMMMG00000018214 #32	ENSMMMG00000018152 #29	CYP4X1 (ENSMMMG00000018100)	PDZK1IP1 (ENSMMMG00000018092)	ENSMMMG00000018085	STIL (ENSMMMG00000018013)
Eurasian red squirrel	MODERN SPECIES		ENSSVLG00005006933 #8	ENSSVLG00005006991 #9	IPP (ENSSVLG00005007023) #10	MAST2 (ENSSVLG00005007081) #11	PIK3R3 (ENSSVLG00005007240) #12	ENSSVLG00005007285	P3R3URF (ENSSVLG00005007305) #13	TSPAN1 (ENSSVLG00005007325) #14	POMGNT1 (ENSSVLG00005007377) #15	LURAP1 (ENSSVLG00005007410) #16	RAD54L (ENSSVLG00005007442) #17	LRRC41 (ENSSVLG00005007517) #18	ENSSVLG00005007591 #19	NSUN4 (ENSSVLG00005007637)	FAAH (ENSSVLG00005007733) #21	DMBX1 (ENSSVLG00005007784) #22	TMEM275 (ENSSVLG00005007823) #23	KNCN (ENSSVLG00005007856) #24	ENSSVLG00005007933 #25	MOB3C (ENSSVLG00005008013) #26	ATPAF1 (ENSSVLG00005008043) #27	EFCAB14 (ENSSVLG00005008138) #28	ENSSVLG00005008165	CYP4B1 (ENSSVLG00005008221) #31	ENSSVLG00005008487 #29	ENSSVLG00005008688	ENSSVLG00005008878 ##32	ENSSVLG00005009845 #32	ENSSVLG00005010122 #32	CYP4X1 (ENSSVLG00005010957)	PDZK1IP1 (ENSSVLG00005011099)
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00420000029753.b.o #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00500000045816	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.a #29	ENSGT00940000155173.f.a #32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889	ENSGT00390000007310	ENSGT00940000160589	ENSGT00940000157140.b.a.b.a
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00420000029753.b.o #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00500000045816	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.a #29	ENSGT00940000155173.f.a #32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889	ENSGT00390000007310	ENSGT00940000160589	ENSGT00940000157140.b.a.b.a
Hystricomorpha_b	ANCESTRAL SPECIES	54	ENSGT00420000029753.b.o #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00940000158851 #14	ENSGT00700000106049 #13	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00500000045816	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.a #29	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889	ENSGT00390000007310	ENSGT00940000160589.k	ENSGT00940000163540	ENSGT00940000161273
Long-tailed chinchilla	MODERN SPECIES	171	CCDC17 (ENSCLAG00000004736) #7	GPBP1L1 (ENSCLAG00000004389) #8	TMEM69 (ENSCLAG00000004231) #9	IPP (ENSCLAG00000004172) #10	ENSCLAG00000004113	MAST2 (ENSCLAG00000010103) #11	PIK3R3 (ENSCLAG00000009454) #12	TSPAN1 (ENSCLAG00000007836) #14	POMGNT1 (ENSCLAG00000006560) #15	LURAP1 (ENSCLAG00000004742) #16	RAD54L (ENSCLAG00000004645) #17	LRRC41 (ENSCLAG00000005312) #18	ENSCLAG00000005279 #19	NSUN4 (ENSCLAG00000005205)	FAAH (ENSCLAG00000004917) #21	DMBX1 (ENSCLAG00000004842) #22	KNCN (ENSCLAG00000004788) #24	ENSCLAG00000004751	MKNK1 (ENSCLAG00000003888)	MOB3C (ENSCLAG00000006684) #26	ATPAF1 (ENSCLAG00000006456) #27	TEX38 (ENSCLAG00000006425)	EFCAB14 (ENSCLAG00000005792) #28	ENSCLAG00000005609 #29	ENSCLAG00000005036 #29	ENSCLAG00000004484 #32	CYP4B1 (ENSCLAG00000007349) #31	PDZK1IP1 (ENSCLAG00000007015)	TAL1 (ENSCLAG00000006842)	STIL (ENSCLAG00000006217)	ENSCLAG00000005985
Degu	MODERN SPECIES	148	ENSODEG00000019594	ENSODEG00000007916 #11	ENSODEG00000008099 #11	PIK3R3 (ENSODEG00000007372) #12	TSPAN1 (ENSODEG00000007355) #14	P3R3URF (ENSODEG00000007045) #13	POMGNT1 (ENSODEG00000009129) #15	LURAP1 (ENSODEG00000007630) #16	RAD54L (ENSODEG00000008519) #17	LRRC41 (ENSODEG00000010892) #18	ENSODEG00000008021 #19	ENSODEG00000009454	NSUN4 (ENSODEG00000007797)	FAAH (ENSODEG00000009316) #21	ENSODEG00000012863	DMBX1 (ENSODEG00000009303) #22	KNCN (ENSODEG00000007576) #24	ENSODEG00000009653	MOB3C (ENSODEG00000009151) #26	ATPAF1 (ENSODEG00000010525) #27	TEX38 (ENSODEG00000010166)	EFCAB14 (ENSODEG00000008413) #28	ENSODEG00000007435	CYP4B1 (ENSODEG00000010933) #31	ENSODEG00000006838 #29	ENSODEG00000019580	ENSODEG00000006889 #29	CYP4X1 (ENSODEG00000007165)	PDZK1IP1 (ENSODEG00000008906)	TAL1 (ENSODEG00000006602)	STIL (ENSODEG00000007478)
Guinea pig	MODERN SPECIES	133	CCDC17 (ENSCPOG00000011472) #7	GPBP1L1 (ENSCPOG00000011476) #8	TMEM69 (ENSCPOG00000009599) #9	IPP (ENSCPOG00000009600) #10	MAST2 (ENSCPOG00000013451) #11	PIK3R3 (ENSCPOG00000010150) #12	P3R3URF (ENSCPOG00000037878) #13	TSPAN1 (ENSCPOG00000005201) #14	POMGNT1 (ENSCPOG00000005204) #15	LURAP1 (ENSCPOG00000034598) #16	RAD54L (ENSCPOG00000006768) #17	LRRC41 (ENSCPOG00000006775) #18	ENSCPOG00000006779 #19	NSUN4 (ENSCPOG00000006781)	FAAH (ENSCPOG00000011399) #21	DMBX1 (ENSCPOG00000027279) #22	KNCN (ENSCPOG00000035083) #24	ENSCPOG00000035798 #25	MOB3C (ENSCPOG00000037412) #26	ATPAF1 (ENSCPOG00000035044) #27	TEX38 (ENSCPOG00000003355)	EFCAB14 (ENSCPOG00000003358) #28	ENSCPOG00000026008 #31	ENSCPOG00000000227 ##32
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000045620	MAST2 (ENSHGLG00000014177) #11	ENSHGLG00000001409	PIK3R3 (ENSHGLG00000001853) #12	P3R3URF (ENSHGLG00000001179) #13	TSPAN1 (ENSHGLG00000001782) #14	POMGNT1 (ENSHGLG00000002171) #15	LURAP1 (ENSHGLG00000043460) #16	ENSHGLG00000000753 #17	LRRC41 (ENSHGLG00000001422) #18	ENSHGLG00000035869 #19	ENSHGLG00000038747	ENSHGLG00000047081	ENSHGLG00000044714	FAAH (ENSHGLG00000041848) #21	DMBX1 (ENSHGLG00000000395) #22	KNCN (ENSHGLG00000042058) #24	MKNK1 (ENSHGLG00000032460)	MOB3C (ENSHGLG00000032969) #26	ATPAF1 (ENSHGLG00000040111) #27	TEX38 (ENSHGLG00000004105)	EFCAB14 (ENSHGLG00000005336) #28	ENSHGLG00000019567	ENSHGLG00000044650 #31	ENSHGLG00000001535 #29	ENSHGLG00000003682 #32	ENSHGLG00000036589	ENSHGLG00000008660 #31	ENSHGLG00000050738 #32	CYP4X1 (ENSHGLG00000002395)	PDZK1IP1 (ENSHGLG00000001653)
Rodentia_B	ANCESTRAL SPECIES		ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00940000153665.b.a.b	ENSGT00500000045816	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570 #29	ENSGT00940000155173.f.b.b ##32	ENSGT00940000155173.f.b.a ##32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00940000153665.b.a.b	ENSGT00500000045816	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570 #29	ENSGT00940000155173.f.b.b ##32	ENSGT00940000155173.f.b.a ##32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889
Muroidea	ANCESTRAL SPECIES	3	ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00940000153665.b.a.b	ENSGT00500000045816	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570 #29	ENSGT00940000155173.f.b.b ##32	ENSGT00940000155173.f.b.a ##32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00940000153665.b.a.b	ENSGT00500000045816	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.f #29	ENSGT00940000155173.f.b.b ##32	ENSGT00940000163570.e.a #29	ENSGT00940000155173.f.b.a ##32	ENSGT00940000160927	ENSGT00940000154660.b
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00940000153665.b.a.b	ENSGT00500000045816	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.f #29	ENSGT00940000163570.e.a #29	ENSGT00940000155173.f.b.b ##32	ENSGT00940000163570.e.b #29	ENSGT00940000155173.f.b.a ##32	ENSGT00940000160927	ENSGT00940000154660.b
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00940000153665.b.a.b	ENSGT00500000045816	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.f #29	ENSGT00940000163570.e.a #29	ENSGT00940000155173.f.b.b ##32	ENSGT00940000163570.e.b #29	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889
Chinese hamster chok1gshd	MODERN SPECIES	111	Gpbp1l1 (ENSCGRG00001022489) #8	Tmem69 (ENSCGRG00001005140) #9	Ipp (ENSCGRG00001018588) #10	Mast2 (ENSCGRG00001023294) #11	Pik3r3 (ENSCGRG00001016378) #12	P3r3urf (ENSCGRG00001011615) #13	Tspan1 (ENSCGRG00001013103) #14	Pomgnt1 (ENSCGRG00001014301) #15	Lurap1 (ENSCGRG00001013238) #16	Rad54l (ENSCGRG00001014807) #17	Lrrc41 (ENSCGRG00001010037) #18	ENSCGRG00001011038 #19	ENSCGRG00001024563	Nsun4 (ENSCGRG00001019730)	Faah (ENSCGRG00001021029) #21	Dmbx1 (ENSCGRG00001016330) #22	Tmem275 (ENSCGRG00001003497) #23	Kncn (ENSCGRG00001024146) #24	ENSCGRG00001007744 #25	Mob3c (ENSCGRG00001011170) #26	Atpaf1 (ENSCGRG00001012405) #27	Tex38 (ENSCGRG00001013204)	Efcab14 (ENSCGRG00001018066) #28	Cyp4b1 (ENSCGRG00001018150) #31	ENSCGRG00001013423 #29	ENSCGRG00001018395 #29	ENSCGRG00001023643 #29	ENSCGRG00001009269 ##32	ENSCGRG00001019487 #29	Cyp4x1 (ENSCGRG00001021846)	Pdzk1ip1 (ENSCGRG00001022750)
Golden Hamster	MODERN SPECIES	648	Gpbp1l1 (ENSMAUG00000003041) #8	Tmem69 (ENSMAUG00000022228) #9	Ipp (ENSMAUG00000007168) #10	ENSMAUG00000012324	Pik3r3 (ENSMAUG00000002444) #12	P3r3urf (ENSMAUG00000018602) #13	Tspan1 (ENSMAUG00000016996) #14	Pomgnt1 (ENSMAUG00000020842) #15	Lurap1 (ENSMAUG00000021605) #16	Rad54l (ENSMAUG00000020076) #17	Lrrc41 (ENSMAUG00000020141) #18	ENSMAUG00000019784	ENSMAUG00000007732	Nsun4 (ENSMAUG00000013883)	Faah (ENSMAUG00000001088) #21	Dmbx1 (ENSMAUG00000013192) #22	Kncn (ENSMAUG00000017362) #24	ENSMAUG00000001517 #25	Mob3c (ENSMAUG00000003368) #26	Atpaf1 (ENSMAUG00000008609) #27	Tex38 (ENSMAUG00000013809)	Efcab14 (ENSMAUG00000019992) #28	Cyp4b1 (ENSMAUG00000011868) #31	ENSMAUG00000018793 #29	ENSMAUG00000011003	ENSMAUG00000021312 #29	Cyp4a30b (ENSMAUG00000010739) #29	ENSMAUG00000021832 #29	Cyp4x1 (ENSMAUG00000011941)	Pdzk1ip1 (ENSMAUG00000019882)	Tal1 (ENSMAUG00000001565)
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00500000045816	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.f #29	ENSGT00940000155173.f.b.b ##32	ENSGT00940000163570.e.a #29	ENSGT00940000155173.f.b.a ##32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889
Prairie vole	MODERN SPECIES	193	Gpbp1l1 (ENSMOCG00000008597) #8	Tmem69 (ENSMOCG00000002055) #9	Ipp (ENSMOCG00000013185) #10	Mast2 (ENSMOCG00000010239) #11	Pik3r3 (ENSMOCG00000009969) #12	P3r3urf (ENSMOCG00000010726) #13	Tspan1 (ENSMOCG00000005309) #14	ENSMOCG00000009957 #15	Lurap1 (ENSMOCG00000014107) #16	Rad54l (ENSMOCG00000001778) #17	Lrrc41 (ENSMOCG00000014764) #18	Uqcrh (ENSMOCG00000001474) #19	Nsun4 (ENSMOCG00000018602)	ENSMOCG00000010041	Faah (ENSMOCG00000015993) #21	Dmbx1 (ENSMOCG00000003287) #22	Kncn (ENSMOCG00000012291) #24	ENSMOCG00000008618 #25	Mob3c (ENSMOCG00000020495) #26	Atpaf1 (ENSMOCG00000017043) #27	Tex38 (ENSMOCG00000014568)	Efcab14 (ENSMOCG00000015034) #28	Cyp4b1 (ENSMOCG00000011934) #31
Northern American deer mouse	MODERN SPECIES	11	Ccdc17 (ENSPEMG00000022313) #7	Gpbp1l1 (ENSPEMG00000023022) #8	Tmem69 (ENSPEMG00000022999) #9	Ipp (ENSPEMG00000023410) #10	Mast2 (ENSPEMG00000022608) #11	Pik3r3 (ENSPEMG00000022142) #12	P3r3urf (ENSPEMG00000008723) #13	Tspan1 (ENSPEMG00000013826) #14	Pomgnt1 (ENSPEMG00000017535) #15	Lurap1 (ENSPEMG00000030650) #16	Rad54l (ENSPEMG00000011422) #17	Lrrc41 (ENSPEMG00000021931) #18	ENSPEMG00000024098 #19	ENSPEMG00000029801	Faah (ENSPEMG00000008896) #21	Dmbx1 (ENSPEMG00000023516) #22	Tmem275 (ENSPEMG00000025552) #23	Kncn (ENSPEMG00000025397) #24	ENSPEMG00000022552 #25	Mob3c (ENSPEMG00000027471) #26	Atpaf1 (ENSPEMG00000028185) #27	Tex38 (ENSPEMG00000030507)	Efcab14 (ENSPEMG00000021842) #28	Cyp4b1 (ENSPEMG00000022964) #31	ENSPEMG00000023206 #29	Cyp4a14 (ENSPEMG00000021401) ##32	ENSPEMG00000021445 ##32	Cyp4x1 (ENSPEMG00000021657)	ENSPEMG00000022028	Tal1 (ENSPEMG00000024420)	Stil (ENSPEMG00000023881)
Murinae	ANCESTRAL SPECIES	2	ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00500000045816	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.f #29	ENSGT00940000155173.f.b.b ##32	ENSGT00940000163570.e.a #29	ENSGT00940000155173.f.b.a ##32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889
Mus	ANCESTRAL SPECIES	3	ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00500000045816	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.f #29	ENSGT00940000155173.f.b.b ##32	ENSGT00940000163570.e.a #29	ENSGT00940000155173.f.a #32	ENSGT00940000160927	ENSGT00940000154660.b	ENSGT00940000159889
Mus_A	ANCESTRAL SPECIES	3	ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00500000045816	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.f #29	ENSGT00940000155173.f.b.b ##32	ENSGT00940000163570.e.a #29	ENSGT00940000155173.f.b.a ##32	ENSGT00940000155173.f.a #32	ENSGT00940000160927	ENSGT00940000154660.b
Mus_B	ANCESTRAL SPECIES	5	ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00500000045816	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.f.c.a #29	ENSGT00940000155173.f.b.b ##32	ENSGT00940000163570.e.a #29	ENSGT00940000155173.f.b.a ##32	ENSGT00940000155173.f.a #32	ENSGT00940000160927	ENSGT00940000154660.b
Mouse	MODERN SPECIES	13	Gpbp1l1 (ENSMUSG00000034042) #8	Tmem69 (ENSMUSG00000055900) #9	Ipp (ENSMUSG00000028696) #10	Mast2 (ENSMUSG00000003810) #11	Pik3r3 (ENSMUSG00000028698) #12	Gm49337 (ENSMUSG00000111410)	P3r3urf (ENSMUSG00000078593) #13	Tspan1 (ENSMUSG00000028699) #14	Lurap1 (ENSMUSG00000028701) #16	Pomgnt1 (ENSMUSG00000028700) #15	Rad54l (ENSMUSG00000028702) #17	Lrrc41 (ENSMUSG00000028703) #18	Uqcrh (ENSMUSG00000063882) #19	Nsun4 (ENSMUSG00000028706)	Faah (ENSMUSG00000034171) #21	Dmbx1 (ENSMUSG00000028707) #22	Tmem275 (ENSMUSG00000034185) #23	Kncn (ENSMUSG00000073774) #24	Mknk1 (ENSMUSG00000028708)	Mob3c (ENSMUSG00000028709) #26	Atpaf1 (ENSMUSG00000028710) #27	Tex38 (ENSMUSG00000044556)	Efcab14 (ENSMUSG00000034210) #28	Cyp4b1 (ENSMUSG00000028713) #31	Cyp4a32 (ENSMUSG00000063929) #29	Cyp4a31 (ENSMUSG00000028712) #29	Cyp4a10 (ENSMUSG00000066072) #29	Cyp4a14 (ENSMUSG00000028715) ##32	Cyp4a30b (ENSMUSG00000084346) #29	Cyp4a12b (ENSMUSG00000078597) ##32	Cyp4a12a (ENSMUSG00000066071) ##32
Mus_C	ANCESTRAL SPECIES	2	ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00500000045816	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000162886	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000163570.f.c.a #29	ENSGT00940000155173.f.b.b ##32	ENSGT00940000163570.e.a #29	ENSGT00940000155173.f.b.a ##32	ENSGT00940000155173.f.a #32	ENSGT00940000160927
Steppe mouse	MODERN SPECIES	2908	Ipp (ENSMSIG00000014220) #10	Mast2 (ENSMSIG00000014279) #11	ENSMSIG00000014744	Pik3r3 (ENSMSIG00000014768) #12	P3r3urf (ENSMSIG00000014803) #13	Tspan1 (ENSMSIG00000014810) #14	Pomgnt1 (ENSMSIG00000014833) #15	Lurap1 (ENSMSIG00000014888) #16	Rad54l (ENSMSIG00000014901) #17	Lrrc41 (ENSMSIG00000014928) #18	ENSMSIG00000014983 #19	ENSMSIG00000015002	ENSMSIG00000015007	ENSMSIG00000015016	Faah (ENSMSIG00000015049) #21	Dmbx1 (ENSMSIG00000015099) #22	Tmem275 (ENSMSIG00000015119) #23	Kncn (ENSMSIG00000015125) #24	ENSMSIG00000015142 #25	Mob3c (ENSMSIG00000015218) #26	Atpaf1 (ENSMSIG00000015226) #27	Tex38 (ENSMSIG00000015281)	Efcab14 (ENSMSIG00000015293) #28
spretus	MODERN SPECIES	13	Ccdc17 (MGP_SPRETEiJ_G0027307) #7	Gpbp1l1 (MGP_SPRETEiJ_G0027306) #8	Tmem69 (MGP_SPRETEiJ_G0027305) #9	Ipp (MGP_SPRETEiJ_G0027304) #10	Mast2 (MGP_SPRETEiJ_G0027303) #11	Pik3r3 (MGP_SPRETEiJ_G0027302) #12	P3r3urf (MGP_SPRETEiJ_G0027301) #13	Tspan1 (MGP_SPRETEiJ_G0027300) #14	Lurap1 (MGP_SPRETEiJ_G0027299) #16	Pomgnt1 (MGP_SPRETEiJ_G0027298) #15	Rad54l (MGP_SPRETEiJ_G0027297) #17	Lrrc41 (MGP_SPRETEiJ_G0027296) #18	Uqcrh (MGP_SPRETEiJ_G0027295) #19	Nsun4 (MGP_SPRETEiJ_G0027294)	Faah (MGP_SPRETEiJ_G0027293) #21	Dmbx1 (MGP_SPRETEiJ_G0027292) #22	Tmem275 (MGP_SPRETEiJ_G0027291) #23	Kncn (MGP_SPRETEiJ_G0027290) #24	Mknk1 (MGP_SPRETEiJ_G0027289)	Mob3c (MGP_SPRETEiJ_G0027288) #26	Atpaf1 (MGP_SPRETEiJ_G0027287) #27	Tex38 (MGP_SPRETEiJ_G0027286)	Efcab14 (MGP_SPRETEiJ_G0027285) #28	Cyp4b1 (MGP_SPRETEiJ_G0027284) #31	Cyp4a14 (MGP_SPRETEiJ_G0027283) ##32	MGP_SPRETEiJ_G0027282 #29	MGP_SPRETEiJ_G0027281 ##32	MGP_SPRETEiJ_G0027280 ##32	MGP_SPRETEiJ_G0027279 #32	Cyp4x1 (MGP_SPRETEiJ_G0027278)	Pdzk1ip1 (MGP_SPRETEiJ_G0027277)
Ryukyu mouse	MODERN SPECIES	13	Ccdc17 (MGP_CAROLIEiJ_G0026335) #7	Gpbp1l1 (MGP_CAROLIEiJ_G0026334) #8	Tmem69 (MGP_CAROLIEiJ_G0026333) #9	Ipp (MGP_CAROLIEiJ_G0026332) #10	Mast2 (MGP_CAROLIEiJ_G0026331) #11	Pik3r3 (MGP_CAROLIEiJ_G0026330) #12	P3r3urf (MGP_CAROLIEiJ_G0026329) #13	Tspan1 (MGP_CAROLIEiJ_G0026328) #14	Lurap1 (MGP_CAROLIEiJ_G0026327) #16	Pomgnt1 (MGP_CAROLIEiJ_G0026326) #15	Rad54l (MGP_CAROLIEiJ_G0026325) #17	Lrrc41 (MGP_CAROLIEiJ_G0026324) #18	Uqcrh (MGP_CAROLIEiJ_G0026323) #19	Nsun4 (MGP_CAROLIEiJ_G0026322)	Faah (MGP_CAROLIEiJ_G0026321) #21	Dmbx1 (MGP_CAROLIEiJ_G0026320) #22	Tmem275 (MGP_CAROLIEiJ_G0026319) #23	Kncn (MGP_CAROLIEiJ_G0026318) #24	Mknk1 (MGP_CAROLIEiJ_G0026317)	Mob3c (MGP_CAROLIEiJ_G0026316) #26	Atpaf1 (MGP_CAROLIEiJ_G0026315) #27	Tex38 (MGP_CAROLIEiJ_G0026314)	Efcab14 (MGP_CAROLIEiJ_G0026313) #28	Cyp4b1 (MGP_CAROLIEiJ_G0026312) #31	MGP_CAROLIEiJ_G0026310 #29	MGP_CAROLIEiJ_G0026309 ##32	MGP_CAROLIEiJ_G0026308 ##32	Cyp4a29 (MGP_CAROLIEiJ_G0026307) #32	Cyp4x1 (MGP_CAROLIEiJ_G0026306)	MGP_CAROLIEiJ_G0026305	Tal1 (MGP_CAROLIEiJ_G0026304)
Shrew mouse	MODERN SPECIES	19	Ccdc17 (MGP_PahariEiJ_G0028667) #7	Gpbp1l1 (MGP_PahariEiJ_G0028666) #8	Tmem69 (MGP_PahariEiJ_G0028665) #9	Ipp (MGP_PahariEiJ_G0028664) #10	Mast2 (MGP_PahariEiJ_G0028663) #11	Pik3r3 (MGP_PahariEiJ_G0028662) #12	P3r3urf (MGP_PahariEiJ_G0028661) #13	Tspan1 (MGP_PahariEiJ_G0028660) #14	Pomgnt1 (MGP_PahariEiJ_G0028659) #15	Lurap1 (MGP_PahariEiJ_G0028658) #16	Rad54l (MGP_PahariEiJ_G0028657) #17	Lrrc41 (MGP_PahariEiJ_G0028656) #18	Uqcrh (MGP_PahariEiJ_G0028655) #19	Nsun4 (MGP_PahariEiJ_G0028654)	Faah (MGP_PahariEiJ_G0028653) #21	Dmbx1 (MGP_PahariEiJ_G0028652) #22	Tmem275 (MGP_PahariEiJ_G0028651) #23	Kncn (MGP_PahariEiJ_G0028650) #24	Mknk1 (MGP_PahariEiJ_G0028649)	Mob3c (MGP_PahariEiJ_G0028648) #26	Atpaf1 (MGP_PahariEiJ_G0028647) #27	Tex38 (MGP_PahariEiJ_G0028646)	Efcab14 (MGP_PahariEiJ_G0028645) #28	Cyp4b1 (MGP_PahariEiJ_G0028644) #31	MGP_PahariEiJ_G0028643 #29	Cyp4a14 (MGP_PahariEiJ_G0028642) ##32	Cyp4a29 (MGP_PahariEiJ_G0028641) #32	Cyp4x1 (MGP_PahariEiJ_G0028640)	MGP_PahariEiJ_G0028639	Tal1 (MGP_PahariEiJ_G0028638)	Stil (MGP_PahariEiJ_G0028637)
Rat	MODERN SPECIES	15	Gpbp1l1 (ENSRNOG00000037595) #8	Tmem69 (ENSRNOG00000029152) #9	Ipp (ENSRNOG00000016183) #10	Mast2 (ENSRNOG00000058476) #11	Pik3r3 (ENSRNOG00000000145) #12	P3r3urf (ENSRNOG00000049874) #13	Tspan1 (ENSRNOG00000023320) #14	Pomgnt1 (ENSRNOG00000023455) #15	Lurap1 (ENSRNOG00000062943) #16	Rad54l (ENSRNOG00000013148) #17	Lrrc41 (ENSRNOG00000013642) #18	Uqcrh (ENSRNOG00000012550) #19	Nsun4 (ENSRNOG00000046192)	Nsun4 (ENSRNOG00000012020)	Faah (ENSRNOG00000045949) #21	Dmbx1 (ENSRNOG00000010835) #22	Tmem275 (ENSRNOG00000066278) #23	Kncn (ENSRNOG00000037618) #24	Mknk1 (ENSRNOG00000010381) #25	Mob3c (ENSRNOG00000037620) #26	Atpaf1 (ENSRNOG00000010169) #27	Tex38 (ENSRNOG00000010162)	Efcab14 (ENSRNOG00000010091) #28	Cyp4b1 (ENSRNOG00000055078) #31	Cyp4a1 (ENSRNOG00000009597) #29	Cyp4a3 (ENSRNOG00000066878) #29	Cyp4a2 (ENSRNOG00000064139) ##32	LOC120102953 (ENSRNOG00000066487) ##32	Cyp4a8 (ENSRNOG00000008842) ##32	Cyp4x1 (ENSRNOG00000043513)	Pdzk1ip1 (ENSRNOG00000008161)
Upper Galilee mountains blind mole rat	MODERN SPECIES	612	Tmem69 (ENSNGAG00000016321) #9	Ipp (ENSNGAG00000017406) #10	ENSNGAG00000022633 #11	ENSNGAG00000024080 #11	Pik3r3 (ENSNGAG00000023327) #12	P3r3urf (ENSNGAG00000007932) #13	Tspan1 (ENSNGAG00000012097) #14	Pomgnt1 (ENSNGAG00000018844) #15	Lurap1 (ENSNGAG00000023881) #16	Rad54l (ENSNGAG00000024213) #17	ENSNGAG00000003373 #18	Uqcrh (ENSNGAG00000014974) #19	ENSNGAG00000023626	Nsun4 (ENSNGAG00000023728)	Faah (ENSNGAG00000019634) #21	Dmbx1 (ENSNGAG00000022326) #22	Kncn (ENSNGAG00000002764) #24	ENSNGAG00000023036 #25	Mob3c (ENSNGAG00000020784) #26	Atpaf1 (ENSNGAG00000001871) #27	Tex38 (ENSNGAG00000013668)	Efcab14 (ENSNGAG00000017934) #28
Lesser Egyptian jerboa	MODERN SPECIES	225	ENSJJAG00000016010 #11	ENSJJAG00000016146	ENSJJAG00000018165 #11	Pik3r3 (ENSJJAG00000018819) #12	P3r3urf (ENSJJAG00000019291) #13	Tspan1 (ENSJJAG00000019605) #14	Pomgnt1 (ENSJJAG00000019921) #15	Lurap1 (ENSJJAG00000000064) #16	ENSJJAG00000000235 #17	ENSJJAG00000000929 #18	Uqcrh (ENSJJAG00000001349) #19	ENSJJAG00000002240	Nsun4 (ENSJJAG00000002968)	Faah (ENSJJAG00000005088) #21	ENSJJAG00000012011	Dmbx1 (ENSJJAG00000006632) #22	Tmem275 (ENSJJAG00000007503) #23	Kncn (ENSJJAG00000007732) #24	Mknk1 (ENSJJAG00000009067)	Mob3c (ENSJJAG00000010451) #26	ENSJJAG00000010592 #27	Tex38 (ENSJJAG00000010819)	Efcab14 (ENSJJAG00000016349) #28	ENSJJAG00000016537	Cyp4b1 (ENSJJAG00000016817) #31	ENSJJAG00000017417 #29	ENSJJAG00000017939 ##32	ENSJJAG00000018267 ##32	ENSJJAG00000018333	ENSJJAG00000018441	ENSJJAG00000018618 #32
Kangaroo rat	MODERN SPECIES	352	Gpbp1l1 (ENSDORG00000001704) #8	Tmem69 (ENSDORG00000029500) #9	Ipp (ENSDORG00000012870) #10	ENSDORG00000027777 #11	ENSDORG00000016502 #11	Pik3r3 (ENSDORG00000025153) #12	P3r3urf (ENSDORG00000026690) #13	Tspan1 (ENSDORG00000006100) #14	Pomgnt1 (ENSDORG00000006101) #15	Lurap1 (ENSDORG00000025353) #16	Rad54l (ENSDORG00000002632) #17	Lrrc41 (ENSDORG00000028319) #18	Uqcrh (ENSDORG00000025522) #19	ENSDORG00000006844	Faah (ENSDORG00000015089) #21	Dmbx1 (ENSDORG00000023987) #22	Kncn (ENSDORG00000025447) #24	Mknk1 (ENSDORG00000007207)	Mob3c (ENSDORG00000007210) #26	Atpaf1 (ENSDORG00000007212) #27	Tex38 (ENSDORG00000006627)	Efcab14 (ENSDORG00000006628) #28	Cyp4b1 (ENSDORG00000002018) #31	ENSDORG00000002019 #29	ENSDORG00000024423 ##32	ENSDORG00000028283	ENSDORG00000008850 ##32	ENSDORG00000027207 ##32	Cyp4x1 (ENSDORG00000015306)	Pdzk1ip1 (ENSDORG00000004566)	Tal1 (ENSDORG00000028266)
Lagomorpha	ANCESTRAL SPECIES	8	ENSGT00390000006459 #7	ENSGT00420000029753.b #8	ENSGT00390000015318 #9	ENSGT00940000158629 #10	ENSGT00940000155705.b #11	ENSGT00940000156259.b #12	ENSGT00700000106049 #13	ENSGT00940000158851 #14	ENSGT00530000063632.A #15	ENSGT00530000063790.a #16	ENSGT00940000156897 #17	ENSGT00390000015908 #18	ENSGT00390000003860 #19	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #21	ENSGT00940000155505.a #22	ENSGT00940000162886	ENSGT00390000008086 #23	ENSGT00400000024146 #24	ENSGT00940000154587.a.a #25	ENSGT01050000244898.a.a.b #26	ENSGT00390000012765 #27	ENSGT00390000016446	ENSGT00390000011196 #28	ENSGT00940000161441 #31	ENSGT00940000155173 #32	ENSGT00940000160927	ENSGT00980000201734	ENSGT00940000159889	ENSGT00390000007310	ENSGT00940000160589
Rabbit	MODERN SPECIES	4	NASP (ENSOCUG00000025231)	ENSOCUG00000017938	GPBP1L1 (ENSOCUG00000017939) #8	TMEM69 (ENSOCUG00000011433) #9	IPP (ENSOCUG00000016604) #10	ENSOCUG00000014294 #11	PIK3R3 (ENSOCUG00000014319) #12	P3R3URF (ENSOCUG00000031739) #13	TSPAN1 (ENSOCUG00000005217) #14	POMGNT1 (ENSOCUG00000005220) #15	LURAP1 (ENSOCUG00000005225) #16	RAD54L (ENSOCUG00000005229) #17	LRRC41 (ENSOCUG00000027117) #18	NSUN4 (ENSOCUG00000007598)	FAAH (ENSOCUG00000003441) #21	DMBX1 (ENSOCUG00000006630) #22	TMEM275 (ENSOCUG00000030363) #23	KNCN (ENSOCUG00000005134) #24	ENSOCUG00000003495 #25	MOB3C (ENSOCUG00000021111) #26	ATPAF1 (ENSOCUG00000009230) #27	TEX38 (ENSOCUG00000006612)	EFCAB14 (ENSOCUG00000006616) #28	ENSOCUG00000012284	CYP4B1 (ENSOCUG00000011201) #31	CYP4A5 (ENSOCUG00000025702) #32	ENSOCUG00000034574	ENSOCUG00000034966	CYP4X1 (ENSOCUG00000008267)	ENSOCUG00000030697	ENSOCUG00000038723
Pika	MODERN SPECIES	7941																DMBX1 (ENSOPRG00000017295) #22	MKNK1 (ENSOPRG00000017297)
Tree shrew	MODERN SPECIES	2993																DMBX1 (ENSTBEG00000005315) #22	ENSTBEG00000006426 #25	ATPAF1 (ENSTBEG00000007201) #27	TEX38 (ENSTBEG00000008132)