Chordata ANCESTRAL SPECIES ENSGT00390000005922 #22 Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00390000005922.b #22 Gnathostomata ANCESTRAL SPECIES 1391 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 Euteleostomi ANCESTRAL SPECIES 169 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00390000010712 #23 ENSGT00940000158869 ENSGT00990000205617 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00950000183362 ENSGT00940000163777.b ENSGT00940000160554 #25 ENSGT00940000156683 ENSGT00940000163777.a ENSGT00940000159910 ENSGT00970000197822 Sarcopterygii ANCESTRAL SPECIES 187 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00990000205617 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00940000160554 #25 ENSGT00940000156683 ENSGT00940000163777.a ENSGT00940000159910 ENSGT00940000165542 ENSGT00940000160487 ENSGT00940000160541 ENSGT00510000046732.B Tetrapoda DUPLICATION Tetrapoda ANCESTRAL SPECIES 27 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00940000174022 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00390000005922.b.c.b ##22 ENSGT00390000010712 #23 ENSGT00940000163777.b.f ENSGT00980000198828 ENSGT00940000163564 ENSGT00940000163777.b.e.a ENSGT00940000160554 #25 ENSGT00940000159725 ENSGT00940000162232 ENSGT00940000156683 ENSGT00940000163777.a ENSGT00940000159910 ENSGT00940000160487 ENSGT00940000165542 Amniota ANCESTRAL SPECIES 17 ENSGT00940000159910 ENSGT00940000163777.a ENSGT00940000156683 ENSGT01040000241462 ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000159725 ENSGT00940000161193 #29 ENSGT00940000160554 #25 ENSGT00940000163564 ENSGT00390000008200 ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Mammalia DUPLICATION Mammalia DUPLICATION Mammalia ANCESTRAL SPECIES 32 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200 ENSGT00940000163564 ENSGT00940000160554 #25 ENSGT00940000157793 ENSGT00940000161193 #29 ENSGT00940000159725 ENSGT00940000156683 ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000159910 ENSGT00940000160487 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000158869 Theria ANCESTRAL SPECIES 18 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200 ENSGT00940000163564 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000159725 ENSGT00940000156683 ENSGT00940000164266 ENSGT00940000162232 ENSGT00940000159910 ENSGT00940000160487 ENSGT00940000160541 ENSGT00510000046732.B Eutheria ANCESTRAL SPECIES 6 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164747 ENSGT00390000008200 ENSGT00940000164089 ENSGT00940000163312 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163469 ENSGT00940000164011 Boreoeutheria ANCESTRAL SPECIES 9 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000163903 ENSGT00940000164036 ENSGT00940000164882 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 Euarchontoglires ANCESTRAL SPECIES 8 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000164036 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 Primates ANCESTRAL SPECIES 8 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000164036 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 Haplorrhini ANCESTRAL SPECIES 4 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000164036 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 Simiiformes ANCESTRAL SPECIES 6 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT01010000226306 #13 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903 ENSGT00390000008200 ENSGT00940000163312.i ENSGT00940000164036 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 Catarrhini ANCESTRAL SPECIES 7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT01010000226306 #13 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.bb.a #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903 ENSGT00390000008200 ENSGT00940000163312.i ENSGT00940000164036 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 Cercopithecidae ANCESTRAL SPECIES 5 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT01010000226306 #13 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.bb.a #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00390000008200 ENSGT00940000163312.i ENSGT00940000164408 ENSGT00940000163903 ENSGT00940000164036 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00900000143298 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 Cercopithecinae ANCESTRAL SPECIES 9 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F.c #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.bb.a #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00390000008200 ENSGT00940000163312.i ENSGT00940000164408 ENSGT00940000163903 ENSGT00940000164036 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00900000143298 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 Cercopithecinae_a ANCESTRAL SPECIES 9 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F.c #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.bb.a #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164408 ENSGT00940000163903 ENSGT00940000164036 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00900000143298 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 Macaca ANCESTRAL SPECIES 7 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F.c #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.bb.a #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000163903 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 ENSGT00940000165899 #32 ENSGT00940000164093 #33 ENSGT00940000163508.c #34 ENSGT00940000168418 #35 Macaca_a ANCESTRAL SPECIES 8 ENSGT00940000160970 #7 ENSGT00940000164709.a.b.b.a.b.a.a.b #8 ENSGT00940000153768.b #9 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00950000182827.F.c #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT01100000263493.b.a.a.a.b.b #15 ENSGT00390000008104 #16 ENSGT00390000006178.bb.a #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 ENSGT00940000165899 #32 ENSGT00940000164093 #33 ENSGT00940000163508.c #34 ENSGT00940000168418 #35 ENSGT00940000163362 #36 Crab-eating macaque MODERN SPECIES 16 SLC4A9 (ENSMFAG00000033873) #7 ENSMFAG00000061909 #8 ANKHD1 (ENSMFAG00000041567) #9 SRA1 (ENSMFAG00000007347) #10 APBB3 (ENSMFAG00000001205) #11 SLC35A4 (ENSMFAG00000041351) #12 ENSMFAG00000058854 #13 CD14 (ENSMFAG00000025943) #14 ENSMFAG00000058253 #15 TMCO6 (ENSMFAG00000034339) #16 IK (ENSMFAG00000040961) #17 NDUFA2 (ENSMFAG00000049634) #18 WDR55 (ENSMFAG00000001095) #19 DND1 (ENSMFAG00000003284) #20 HARS1 (ENSMFAG00000002630) #21 HARS2 (ENSMFAG00000003090) #22 ZMAT2 (ENSMFAG00000037329) #23 PCDHA4 (ENSMFAG00000054472) #24 PCDHAC2 (ENSMFAG00000043753) #25 ENSMFAG00000061386 #26 PCDHB1 (ENSMFAG00000021230) #27 ENSMFAG00000051210 #28 PCDHB3 (ENSMFAG00000003623) #29 PCDHB4 (ENSMFAG00000003385) #30 ENSMFAG00000047273 #31 PCDHB8 (ENSMFAG00000052129) #32 PCDHB16 (ENSMFAG00000026752) #33 PCDHB10 (ENSMFAG00000055499) #34 ENSMFAG00000051593 #35 PCDHB14 (ENSMFAG00000005051) #36 SLC25A2 (ENSMFAG00000027395) #37 Rhesus MODERN SPECIES 16 HBEGF (ENSMMUG00000060742) SLC4A9 (ENSMMUG00000003723) #7 ENSMMUG00000063513 #8 EIF4EBP3 (ENSMMUG00000019582) #9 APBB3 (ENSMMUG00000001707) #11 SLC35A4 (ENSMMUG00000001725) #12 ENSMMUG00000062326 CD14 (ENSMMUG00000010007) #14 ENSMMUG00000060632 #15 TMCO6 (ENSMMUG00000018246) #16 NDUFA2 (ENSMMUG00000056796) #18 IK (ENSMMUG00000010008) #17 WDR55 (ENSMMUG00000058653) #19 DND1 (ENSMMUG00000052950) #20 HARS1 (ENSMMUG00000004481) #21 HARS2 (ENSMMUG00000004483) #22 ZMAT2 (ENSMMUG00000004484) #23 PCDHAC2 (ENSMMUG00000014571) #25 PCDHB1 (ENSMMUG00000014574) #27 PCDHB2 (ENSMMUG00000061483) PCDHB3 (ENSMMUG00000062270) #29 PCDHB4 (ENSMMUG00000019523) #30 PCDHB5 (ENSMMUG00000057673) PCDHB6 (ENSMMUG00000062723) ENSMMUG00000029809 #31 PCDHB7 (ENSMMUG00000050553) PCDHB8 (ENSMMUG00000051748) #32 PCDHB10 (ENSMMUG00000061532) #34 PCDHB13 (ENSMMUG00000049686) ENSMMUG00000053051 PCDHB15 (ENSMMUG00000021941) Pig-tailed macaque MODERN SPECIES 383 PFDN1 (ENSMNEG00000038519) HBEGF (ENSMNEG00000029451) SLC4A9 (ENSMNEG00000044652) #7 ANKHD1 (ENSMNEG00000030029) #9 SRA1 (ENSMNEG00000029401) #10 APBB3 (ENSMNEG00000029415) #11 ENSMNEG00000040672 ENSMNEG00000040012 CD14 (ENSMNEG00000031928) #14 TMCO6 (ENSMNEG00000037241) #16 NDUFA2 (ENSMNEG00000033708) #18 IK (ENSMNEG00000020155) #17 WDR55 (ENSMNEG00000042797) #19 DND1 (ENSMNEG00000038956) #20 HARS1 (ENSMNEG00000020918) #21 HARS2 (ENSMNEG00000040270) #22 ZMAT2 (ENSMNEG00000031600) #23 PCDHA8 (ENSMNEG00000008879) PCDHAC2 (ENSMNEG00000039616) #25 PCDHB1 (ENSMNEG00000003349) #27 ENSMNEG00000025056 ENSMNEG00000026473 PCDHB4 (ENSMNEG00000036578) #30 ENSMNEG00000032300 #31 PCDHB10 (ENSMNEG00000023270) #34 ENSMNEG00000040142 #35 PCDHB14 (ENSMNEG00000026635) #36 ENSMNEG00000026891 PCDHGA10 (ENSMNEG00000031767) PCDHGA4 (ENSMNEG00000029363) DIAPH1 (ENSMNEG00000034458) Cercopithecinae_b ANCESTRAL SPECIES 4 ENSGT00390000009786 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F.c #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.bb.a #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164408 ENSGT00940000163903 ENSGT00940000164036 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00900000143298 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000165899 #32 ENSGT00940000168418 #35 Cercopithecinae_d ANCESTRAL SPECIES 18 ENSGT00390000009786 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00910000147452 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.bb.a #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164408 ENSGT00940000163903 ENSGT00940000164036 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00900000143298 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000165899 #32 ENSGT00940000168418 #35 Sooty mangabey MODERN SPECIES 309 PFDN1 (ENSCATG00000018995) HBEGF (ENSCATG00000044743) SLC4A9 (ENSCATG00000022107) #7 ANKHD1 (ENSCATG00000029425) #9 SRA1 (ENSCATG00000044295) #10 APBB3 (ENSCATG00000032944) #11 ENSCATG00000031674 ENSCATG00000034680 CD14 (ENSCATG00000030860) #14 TMCO6 (ENSCATG00000032823) #16 NDUFA2 (ENSCATG00000036702) #18 IK (ENSCATG00000044094) #17 WDR55 (ENSCATG00000034527) #19 DND1 (ENSCATG00000025088) #20 HARS1 (ENSCATG00000036942) #21 HARS2 (ENSCATG00000034017) #22 ZMAT2 (ENSCATG00000032843) #23 PCDHAC2 (ENSCATG00000039230) #25 PCDHB1 (ENSCATG00000021671) #27 ENSCATG00000020787 ENSCATG00000005931 PCDHB3 (ENSCATG00000004125) #29 PCDHB4 (ENSCATG00000041627) #30 PCDHB5 (ENSCATG00000021394) ENSCATG00000041883 #31 ENSCATG00000031584 #35 PCDHB14 (ENSCATG00000002956) #36 PCDHGA4 (ENSCATG00000043500) ENSCATG00000020733 DIAPH1 (ENSCATG00000035236) HDAC3 (ENSCATG00000017981) Drill MODERN SPECIES 1446 PFDN1 (ENSMLEG00000042368) HBEGF (ENSMLEG00000040667) SLC4A9 (ENSMLEG00000000295) #7 ANKHD1 (ENSMLEG00000029310) #9 SRA1 (ENSMLEG00000036807) #10 APBB3 (ENSMLEG00000017053) #11 ENSMLEG00000042111 CD14 (ENSMLEG00000040468) #14 TMCO6 (ENSMLEG00000043597) #16 NDUFA2 (ENSMLEG00000043870) #18 IK (ENSMLEG00000018434) #17 WDR55 (ENSMLEG00000035918) #19 DND1 (ENSMLEG00000044049) #20 HARS1 (ENSMLEG00000016289) #21 HARS2 (ENSMLEG00000014240) #22 ZMAT2 (ENSMLEG00000041320) #23 PCDHAC2 (ENSMLEG00000001069) #25 PCDHA5 (ENSMLEG00000023182) ENSMLEG00000044351 PCDHA10 (ENSMLEG00000044362) PCDHB1 (ENSMLEG00000000950) #27 ENSMLEG00000012923 ENSMLEG00000027337 PCDHB3 (ENSMLEG00000027275) #29 PCDHB4 (ENSMLEG00000019793) #30 PCDHB5 (ENSMLEG00000031142) PCDHB6 (ENSMLEG00000033049) ENSMLEG00000042263 #31 PCDHB8 (ENSMLEG00000017381) #32 ENSMLEG00000031089 #35 Olive baboon MODERN SPECIES 15 ENSPANG00000038370 HBEGF (ENSPANG00000011663) SLC4A9 (ENSPANG00000002472) #7 ANKHD1 (ENSPANG00000000200) #9 SRA1 (ENSPANG00000008615) #10 APBB3 (ENSPANG00000006033) #11 ENSPANG00000031921 SLC35A4 (ENSPANG00000024663) #12 CD14 (ENSPANG00000011929) #14 TMCO6 (ENSPANG00000003022) #16 NDUFA2 (ENSPANG00000035408) #18 IK (ENSPANG00000019171) #17 WDR55 (ENSPANG00000015777) #19 DND1 (ENSPANG00000007892) #20 HARS1 (ENSPANG00000011928) #21 HARS2 (ENSPANG00000011662) #22 ZMAT2 (ENSPANG00000032021) #23 PCDHAC2 (ENSPANG00000009513) #25 ENSPANG00000050229 #28 ENSPANG00000049344 PCDHB4 (ENSPANG00000045109) #30 PCDHB5 (ENSPANG00000014179) PCDHB6 (ENSPANG00000023782) ENSPANG00000034248 #31 PCDHB7 (ENSPANG00000033865) ENSPANG00000034312 #35 PCDHB14 (ENSPANG00000019433) #36 PCDHB15 (ENSPANG00000003559) SLC25A2 (ENSPANG00000000311) #37 TAF7 (ENSPANG00000000647) PCDHGA2 (ENSPANG00000037083) Vervet Monkey MODERN SPECIES 15 PFDN1 (ENSCSAG00000012913) HBEGF (ENSCSAG00000012908) SLC4A9 (ENSCSAG00000012893) #7 ANKHD1 (ENSCSAG00000012854) #9 EIF4EBP3 (ENSCSAG00000012830) SRA1 (ENSCSAG00000012824) #10 APBB3 (ENSCSAG00000012804) #11 SLC35A4 (ENSCSAG00000000493) #12 CD14 (ENSCSAG00000012743) #14 TMCO6 (ENSCSAG00000012735) #16 NDUFA2 (ENSCSAG00000012711) #18 IK (ENSCSAG00000012695) #17 WDR55 (ENSCSAG00000012681) #19 DND1 (ENSCSAG00000012677) #20 HARS1 (ENSCSAG00000012664) #21 HARS2 (ENSCSAG00000012655) #22 ZMAT2 (ENSCSAG00000012639) #23 PCDHA1 (ENSCSAG00000012633) ENSCSAG00000012618 PCDHA9 (ENSCSAG00000012611) PCDHAC2 (ENSCSAG00000012587) #25 PCDHB1 (ENSCSAG00000000492) #27 PCDHB2 (ENSCSAG00000000491) PCDHB3 (ENSCSAG00000000490) #29 PCDHB4 (ENSCSAG00000000489) #30 PCDHB5 (ENSCSAG00000000488) PCDHB6 (ENSCSAG00000000487) PCDHB7 (ENSCSAG00000012530) PCDHB8 (ENSCSAG00000012515) #32 PCDHB12 (ENSCSAG00000012510) PCDHB14 (ENSCSAG00000012505) #36 Rhinopithecus ANCESTRAL SPECIES 17 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT01010000226306 #13 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.bb.a #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a.f #19 ENSGT00940000153727.a.e #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000163903 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00900000143298 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000164093 #33 ENSGT00940000163508.c #34 ENSGT00940000163201.a.b ENSGT00940000163201.a.a ENSGT00940000164011 ENSGT00940000163786 #31 ENSGT00940000163201.b Black snub-nosed monkey MODERN SPECIES 1063 METTL7A (ENSRBIG00000039865) TMPRSS12 (ENSRBIG00000033759) ATF1 (ENSRBIG00000030964) DIP2B (ENSRBIG00000003322) ENSRBIG00000038857 FAM186A (ENSRBIG00000031479) ENSRBIG00000034615 ENSRBIG00000025534 NDUFA2 (ENSRBIG00000032428) ##18 IK (ENSRBIG00000041959) #17 WDR55 (ENSRBIG00000043936) #19 ENSRBIG00000038113 #19 DND1 (ENSRBIG00000036511) #20 HARS1 (ENSRBIG00000028934) #21 HARS2 (ENSRBIG00000036529) #22 ZMAT2 (ENSRBIG00000031072) #23 Golden snub-nosed monkey MODERN SPECIES 2661 PFDN1 (ENSRROG00000040145) HBEGF (ENSRROG00000030102) SLC4A9 (ENSRROG00000034854) #7 ANKHD1 (ENSRROG00000039204) #9 ENSRROG00000004069 SRA1 (ENSRROG00000011630) #10 APBB3 (ENSRROG00000036652) #11 ENSRROG00000035897 CD14 (ENSRROG00000038241) #14 TMCO6 (ENSRROG00000035531) #16 ENSRROG00000044049 #18 IK (ENSRROG00000030823) #17 ENSRROG00000041702 #19 DND1 (ENSRROG00000039329) #20 HARS1 (ENSRROG00000033541) #21 HARS2 (ENSRROG00000036375) #22 ZMAT2 (ENSRROG00000032700) #23 PCDHAC2 (ENSRROG00000043490) #25 PCDHA8 (ENSRROG00000029015) ENSRROG00000006327 PCDHB4 (ENSRROG00000038919) #30 PCDHB5 (ENSRROG00000022029) ENSRROG00000038377 #31 ENSRROG00000041778 PCDHB14 (ENSRROG00000003674) #36 PCDHB15 (ENSRROG00000026845) ENSRROG00000016468 PCDHGA4 (ENSRROG00000031416) PCDHGB3 (ENSRROG00000041977) DIAPH1 (ENSRROG00000036504) HDAC3 (ENSRROG00000026471) Hominoidea ANCESTRAL SPECIES 8 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00910000147452 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.cb ##18 ENSGT00940000153727.b.m #17 ENSGT00940000153727.a #19 ENSGT00940000159225.g #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903.a ENSGT00940000163312.j ENSGT00940000163903.b ENSGT00940000163312.i ENSGT00940000164036 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 Gibbon MODERN SPECIES 11 HBEGF (ENSNLEG00000009220) SLC4A9 (ENSNLEG00000009225) #7 ANKHD1 (ENSNLEG00000009235) #9 SRA1 (ENSNLEG00000034424) #10 ENSNLEG00000009275 #11 ENSNLEG00000032877 ENSNLEG00000009304 ENSNLEG00000034768 CD14 (ENSNLEG00000009307) #14 TMCO6 (ENSNLEG00000009308) #16 ENSNLEG00000009325 ##18 IK (ENSNLEG00000009329) #17 WDR55 (ENSNLEG00000033658) #19 DND1 (ENSNLEG00000034318) #20 HARS1 (ENSNLEG00000009389) #21 HARS2 (ENSNLEG00000009427) #22 ENSNLEG00000009450 #23 ENSNLEG00000009485 PCDHAC2 (ENSNLEG00000018464) #25 PCDHB3 (ENSNLEG00000027630) #29 PCDHB4 (ENSNLEG00000029366) #30 PCDHB5 (ENSNLEG00000009491) ENSNLEG00000009493 #31 ENSNLEG00000028488 #32 ENSNLEG00000033041 ENSNLEG00000009502 ##34 PCDHB10 (ENSNLEG00000027263) #34 ENSNLEG00000028941 PCDHB13 (ENSNLEG00000018472) PCDHB14 (ENSNLEG00000035733) #36 PCDHB15 (ENSNLEG00000029099) Hominidae ANCESTRAL SPECIES 7 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00910000147452 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.cb ##18 ENSGT00940000153727.b.m #17 ENSGT00940000153727.a #19 ENSGT00940000159225.g #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903.a ENSGT00940000163312.j ENSGT00940000163903.b ENSGT00940000163312.i ENSGT00940000164036 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 Orangutan MODERN SPECIES 18 PFDN1 (ENSPPYG00000030565) HBEGF (ENSPPYG00000015852) SLC4A9 (ENSPPYG00000015853) #7 ANKHD1 (ENSPPYG00000015854) #9 EIF4EBP3 (ENSPPYG00000041086) SRA1 (ENSPPYG00000015855) #10 APBB3 (ENSPPYG00000015856) #11 SLC35A4 (ENSPPYG00000015857) #12 CD14 (ENSPPYG00000015858) #14 TMCO6 (ENSPPYG00000015859) #16 NDUFA2 (ENSPPYG00000036662) ##18 IK (ENSPPYG00000015861) #17 WDR55 (ENSPPYG00000015862) #19 DND1 (ENSPPYG00000015863) #20 HARS1 (ENSPPYG00000015864) #21 HARS2 (ENSPPYG00000015865) #22 ZMAT2 (ENSPPYG00000015866) #23 PCDHAC2 (ENSPPYG00000015871) #25 ENSPPYG00000030326 PCDHB1 (ENSPPYG00000015874) #27 ENSPPYG00000041606 #28 PCDHB3 (ENSPPYG00000030794) #29 PCDHB4 (ENSPPYG00000015876) #30 PCDHB5 (ENSPPYG00000015877) ENSPPYG00000033454 #31 PCDHB7 (ENSPPYG00000036784) PCDHB8 (ENSPPYG00000015878) #32 PCDHB9 (ENSPPYG00000032781) ##34 PCDHB10 (ENSPPYG00000034983) #34 ENSPPYG00000037312 ENSPPYG00000034174 Homo/Pan/Gorilla group DUPLICATION Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00390000005922.b.d.b.b.a #22 Gorilla MODERN SPECIES 18 ANKHD1 (ENSGGOG00000000288) #9 SRA1 (ENSGGOG00000042935) #10 APBB3 (ENSGGOG00000015880) #11 ENSGGOG00000004098 ENSGGOG00000037182 CD14 (ENSGGOG00000010370) #14 TMCO6 (ENSGGOG00000013364) #16 ENSGGOG00000013369 ##18 IK (ENSGGOG00000013374) #17 WDR55 (ENSGGOG00000013388) #19 ENSGGOG00000042535 #20 ENSGGOG00000013169 #21 ENSGGOG00000025477 #21 ENSGGOG00000044128 #20 HARS2 (ENSGGOG00000013177) #22 ENSGGOG00000041947 #22 ZMAT2 (ENSGGOG00000005121) #23 PCDHAC2 (ENSGGOG00000000665) #25 ENSGGOG00000007051 ENSGGOG00000008247 ENSGGOG00000042273 PCDHB3 (ENSGGOG00000008302) #29 PCDHB4 (ENSGGOG00000013194) #30 PCDHB5 (ENSGGOG00000008995) PCDHB6 (ENSGGOG00000034817) ENSGGOG00000036986 #31 PCDHB7 (ENSGGOG00000041339) ENSGGOG00000040231 PCDHB10 (ENSGGOG00000013190) #34 ENSGGOG00000036260 PCDHB12 (ENSGGOG00000008290) Homo/Pan/Gorilla group ANCESTRAL SPECIES 7 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00910000147452 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.cb ##18 ENSGT00940000153727.b.m #17 ENSGT00940000153727.a #19 ENSGT00940000159225.g #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903.a ENSGT00940000163312.j ENSGT00940000163903.b ENSGT00940000163312.i ENSGT00940000164036 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 Gorilla MODERN SPECIES 18 SLC4A9 (ENSGGOG00000000287) #7 ANKHD1 (ENSGGOG00000000288) #9 SRA1 (ENSGGOG00000042935) #10 APBB3 (ENSGGOG00000015880) #11 ENSGGOG00000004098 ENSGGOG00000037182 CD14 (ENSGGOG00000010370) #14 TMCO6 (ENSGGOG00000013364) #16 ENSGGOG00000013369 ##18 IK (ENSGGOG00000013374) #17 WDR55 (ENSGGOG00000013388) #19 ENSGGOG00000042535 #20 ENSGGOG00000013169 #21 ENSGGOG00000025477 #21 ENSGGOG00000044128 #20 HARS2 (ENSGGOG00000013177) #22 ENSGGOG00000041947 #22 ZMAT2 (ENSGGOG00000005121) #23 PCDHAC2 (ENSGGOG00000000665) #25 ENSGGOG00000007051 ENSGGOG00000008247 ENSGGOG00000042273 PCDHB3 (ENSGGOG00000008302) #29 PCDHB4 (ENSGGOG00000013194) #30 PCDHB5 (ENSGGOG00000008995) PCDHB6 (ENSGGOG00000034817) ENSGGOG00000036986 #31 PCDHB7 (ENSGGOG00000041339) ENSGGOG00000040231 PCDHB10 (ENSGGOG00000013190) #34 ENSGGOG00000036260 Homo/Pan group ANCESTRAL SPECIES 8 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00910000147452 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.cb ##18 ENSGT00940000153727.b.m #17 ENSGT00940000153727.a #19 ENSGT00940000159225.g #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903.a ENSGT00940000163312.j ENSGT00940000163903.b ENSGT00940000163312.i ENSGT00940000164036 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 Human MODERN SPECIES 17 HBEGF (ENSG00000113070) SLC4A9 (ENSG00000113073) #7 ANKHD1 (ENSG00000131503) #9 ANKHD1-EIF4EBP3 (ENSG00000254996) SRA1 (ENSG00000213523) #10 EIF4EBP3 (ENSG00000243056) APBB3 (ENSG00000113108) #11 SLC35A4 (ENSG00000176087) #12 CD14 (ENSG00000170458) #14 NDUFA2 (ENSG00000131495) #18 TMCO6 (ENSG00000113119) #16 IK (ENSG00000113141) #17 WDR55 (ENSG00000120314) #19 DND1 (ENSG00000256453) #20 HARS1 (ENSG00000170445) #21 HARS2 (ENSG00000112855) #22 ZMAT2 (ENSG00000146007) #23 PCDHA1 (ENSG00000204970) PCDHA2 (ENSG00000204969) PCDHA3 (ENSG00000255408) PCDHA4 (ENSG00000204967) #24 PCDHA5 (ENSG00000204965) PCDHA6 (ENSG00000081842) PCDHA7 (ENSG00000204963) PCDHA8 (ENSG00000204962) PCDHA9 (ENSG00000204961) PCDHA10 (ENSG00000250120) PCDHA11 (ENSG00000249158) PCDHA12 (ENSG00000251664) PCDHA13 (ENSG00000239389) PCDHAC1 (ENSG00000248383) Pan ANCESTRAL SPECIES 10 ENSGT00390000009786 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00910000147452 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.cb ##18 ENSGT00940000153727.b.m #17 ENSGT00940000153727.a #19 ENSGT00940000159225.g #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00940000163333 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 Bonobo MODERN SPECIES 18 PFDN1 (ENSPPAG00000029009) HBEGF (ENSPPAG00000039648) SLC4A9 (ENSPPAG00000005338) #7 ANKHD1 (ENSPPAG00000006129) #9 SRA1 (ENSPPAG00000032469) #10 APBB3 (ENSPPAG00000039248) #11 ENSPPAG00000036511 ENSPPAG00000040115 CD14 (ENSPPAG00000041409) #14 TMCO6 (ENSPPAG00000037562) #16 ENSPPAG00000029576 ##18 IK (ENSPPAG00000017619) #17 WDR55 (ENSPPAG00000042662) #19 DND1 (ENSPPAG00000031543) #20 HARS1 (ENSPPAG00000039715) #21 HARS2 (ENSPPAG00000039406) #22 ZMAT2 (ENSPPAG00000034165) #23 PCDHA1 (ENSPPAG00000030806) PCDHA3 (ENSPPAG00000021393) PCDHA4 (ENSPPAG00000015078) #24 PCDHA5 (ENSPPAG00000028190) PCDHAC2 (ENSPPAG00000024384) #25 PCDHA11 (ENSPPAG00000028775) PCDHB1 (ENSPPAG00000008820) #27 ENSPPAG00000034561 PCDHB2 (ENSPPAG00000035562) PCDHB3 (ENSPPAG00000009539) #29 PCDHB5 (ENSPPAG00000000875) PCDHB6 (ENSPPAG00000004197) ENSPPAG00000038399 #31 PCDHB7 (ENSPPAG00000017091) Chimpanzee MODERN SPECIES 18 PFDN1 (ENSPTRG00000017310) HBEGF (ENSPTRG00000017311) SLC4A9 (ENSPTRG00000017312) #7 EIF4EBP3 (ENSPTRG00000047729) #9 SRA1 (ENSPTRG00000017314) #10 APBB3 (ENSPTRG00000033999) #11 SLC35A4 (ENSPTRG00000017316) ENSPTRG00000049309 CD14 (ENSPTRG00000028584) #14 TMCO6 (ENSPTRG00000017320) #16 NDUFA2 (ENSPTRG00000017321) ##18 IK (ENSPTRG00000046901) #17 WDR55 (ENSPTRG00000017323) #19 DND1 (ENSPTRG00000017324) #20 HARS1 (ENSPTRG00000017325) #21 HARS2 (ENSPTRG00000017326) #22 ZMAT2 (ENSPTRG00000017327) #23 PCDHA2 (ENSPTRG00000017328) #25 PCDHB1 (ENSPTRG00000017330) #27 ENSPTRG00000046002 ENSPTRG00000049042 PCDHB4 (ENSPTRG00000017333) #30 ENSPTRG00000047767 PCDHB5 (ENSPTRG00000017334) PCDHB6 (ENSPTRG00000017335) PCDHB17 (ENSPTRG00000032486) #31 ENSPTRG00000049066 PCDHB16 (ENSPTRG00000017338) #33 PCDHB9 (ENSPTRG00000028558) ##34 PCDHB10 (ENSPTRG00000032485) #34 PCDHB11 (ENSPTRG00000050672) Platyrrhini ANCESTRAL SPECIES 7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT01010000226306 #13 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000006029.b ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.ab #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000160554 #25 ENSGT00960000186917 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 ENSGT00940000165899 #32 ENSGT00940000164093 #33 ENSGT00940000163508.d ##34 ENSGT00940000163201.b ENSGT00940000164011 ENSGT00940000163508.c #34 Cebidae ANCESTRAL SPECIES 6 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT01010000226306 #13 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000006029.b ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.ab #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000160554 #25 ENSGT00910000147044 ENSGT00960000186917 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 ENSGT00940000165899 #32 ENSGT00940000164093 #33 ENSGT00940000163508.d ##34 ENSGT00940000163201.b ENSGT00940000164011 Cebidae_a ANCESTRAL SPECIES 3 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT01010000226306 #13 ENSGT00390000007844 ENSGT00390000006029.b ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.ab #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000160554 #25 ENSGT00910000147044 ENSGT00960000186917 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163469 ENSGT00940000165899 #32 ENSGT00910000147119 ENSGT00940000163508.d ##34 ENSGT00940000163201.b ENSGT00940000164011 ENSGT00940000163362 #36 ENSGT00940000162842 Bolivian squirrel monkey MODERN SPECIES 103 HBEGF (ENSSBOG00000030515) SLC4A9 (ENSSBOG00000030693) #7 ANKHD1 (ENSSBOG00000027605) #9 SRA1 (ENSSBOG00000011756) #10 APBB3 (ENSSBOG00000024294) #11 ENSSBOG00000033106 #13 ENSSBOG00000029254 ENSSBOG00000032306 CD14 (ENSSBOG00000034070) #14 TMCO6 (ENSSBOG00000029470) #16 NDUFA2 (ENSSBOG00000021588) #18 IK (ENSSBOG00000026357) #17 WDR55 (ENSSBOG00000020822) #19 DND1 (ENSSBOG00000027247) #20 HARS1 (ENSSBOG00000020268) #21 HARS2 (ENSSBOG00000032350) #22 ZMAT2 (ENSSBOG00000025911) #23 Capuchin MODERN SPECIES 76 SINHCAF (ENSCCAG00000027218) ENSCCAG00000033092 ENSCCAG00000031001 DENND5B (ENSCCAG00000021498) ETFBKMT (ENSCCAG00000032994) AMN1 (ENSCCAG00000031478) ENSCCAG00000024724 ENSCCAG00000024963 HARS2 (ENSCCAG00000010689) #22 ZMAT2 (ENSCCAG00000024723) #23 ENSCCAG00000036365 PCDHAC2 (ENSCCAG00000019689) #25 ENSCCAG00000001295 ENSCCAG00000011151 PCDHB3 (ENSCCAG00000001238) #29 PCDHB4 (ENSCCAG00000035537) #30 PCDHB5 (ENSCCAG00000034704) ENSCCAG00000036527 PCDHB7 (ENSCCAG00000022977) PCDHB8 (ENSCCAG00000030006) #32 ENSCCAG00000031338 #36 PCDHGA4 (ENSCCAG00000023813) DIAPH1 (ENSCCAG00000023411) ENSCCAG00000019961 Marmoset MODERN SPECIES 11 SLC4A9 (ENSCJAG00000016762) #7 ANKHD1 (ENSCJAG00000016624) #9 EIF4EBP3 (ENSCJAG00000041408) ENSCJAG00000016613 #10 APBB3 (ENSCJAG00000016553) #11 ENSCJAG00000074508 SLC35A4 (ENSCJAG00000038978) #12 ENSCJAG00000076026 ##15 CD14 (ENSCJAG00000052964) #14 TMCO6 (ENSCJAG00000016529) #16 IK (ENSCJAG00000016366) #17 ENSCJAG00000087247 WDR55 (ENSCJAG00000016359) #19 DND1 (ENSCJAG00000016345) #20 HARS1 (ENSCJAG00000016282) #21 HARS2 (ENSCJAG00000016237) #22 ENSCJAG00000016231 #23 ENSCJAG00000075741 PCDHA9 (ENSCJAG00000016159) ENSCJAG00000072316 ENSCJAG00000077557 ENSCJAG00000043731 #28 PCDHB3 (ENSCJAG00000084247) #29 PCDHB4 (ENSCJAG00000082856) #30 PCDHB5 (ENSCJAG00000046665) PCDHB6 (ENSCJAG00000039993) ENSCJAG00000080951 #31 PCDHB7 (ENSCJAG00000077866) PCDHB8 (ENSCJAG00000072174) #32 ENSCJAG00000082423 #33 ENSCJAG00000077002 #33 Mas night monkey MODERN SPECIES 966 ENSANAG00000035559 ANKHD1 (ENSANAG00000035164) #9 SRA1 (ENSANAG00000020391) #10 APBB3 (ENSANAG00000034312) #11 ENSANAG00000033588 SLC35A4 (ENSANAG00000016426) #12 ENSANAG00000036424 ENSANAG00000034215 CD14 (ENSANAG00000034732) #14 TMCO6 (ENSANAG00000034193) #16 ENSANAG00000036345 #18 IK (ENSANAG00000037081) #17 WDR55 (ENSANAG00000029439) #19 ENSANAG00000037212 #20 HARS1 (ENSANAG00000034093) #21 HARS2 (ENSANAG00000028635) #22 ZMAT2 (ENSANAG00000028921) #23 ENSANAG00000028755 ENSANAG00000026457 PCDHAC2 (ENSANAG00000033673) #25 ENSANAG00000024712 PCDHB3 (ENSANAG00000029348) #29 PCDHB4 (ENSANAG00000032867) #30 ENSANAG00000023913 #31 PCDHB7 (ENSANAG00000028196) PCDHB16 (ENSANAG00000029635) #33 ENSANAG00000028914 PCDHB10 (ENSANAG00000037153) #34 PCDHB12 (ENSANAG00000027384) PCDHB14 (ENSANAG00000028449) #36 PCDHB15 (ENSANAG00000029490) Tarsier MODERN SPECIES 7283 CD14 (ENSTSYG00000000598) #14 TMCO6 (ENSTSYG00000034411) #16 NDUFA2 (ENSTSYG00000008340) #18 IK (ENSTSYG00000001304) #17 WDR55 (ENSTSYG00000033042) #19 DND1 (ENSTSYG00000026365) #20 HARS (ENSTSYG00000001804) #21 HARS2 (ENSTSYG00000001833) #22 ZMAT2 (ENSTSYG00000035442) #23 PCDHA2 (ENSTSYG00000004840) PCDHA3 (ENSTSYG00000004842) PCDHA4 (ENSTSYG00000014492) #24 PCDHA5 (ENSTSYG00000007083) ENSTSYG00000005760 Strepsirrhini ANCESTRAL SPECIES 5 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000163903 ENSGT00940000164036 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000163433 ENSGT00940000163469 ENSGT00940000164011 ENSGT00940000163362 #36 ENSGT01090000260204 Lemuriformes ANCESTRAL SPECIES 21 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000163903 ENSGT00940000164036 ENSGT00940000160554 #25 ENSGT00960000186917 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000163433 ENSGT00940000163469 ENSGT00940000164011 ENSGT00940000164093 #33 ENSGT00940000163508 #34 ENSGT00940000163362 #36 Mouse lemur MODERN SPECIES 10 CYSTM1 (ENSMICG00000047794) PFDN1 (ENSMICG00000043564) HBEGF (ENSMICG00000047446) SLC4A9 (ENSMICG00000000352) #7 ANKHD1 (ENSMICG00000000358) #9 SRA1 (ENSMICG00000044059) #10 APBB3 (ENSMICG00000000372) #11 ENSMICG00000036280 CD14 (ENSMICG00000037582) #14 TMCO6 (ENSMICG00000014064) #16 NDUFA2 (ENSMICG00000047730) #18 IK (ENSMICG00000014045) #17 WDR55 (ENSMICG00000045324) #19 DND1 (ENSMICG00000029187) #20 HARS1 (ENSMICG00000014087) #21 HARS2 (ENSMICG00000014100) #22 ZMAT2 (ENSMICG00000042843) #23 PCDHAC2 (ENSMICG00000034226) #25 ENSMICG00000029317 ENSMICG00000046655 PCDHA12 (ENSMICG00000030528) PCDHB3 (ENSMICG00000016131) #29 PCDHB4 (ENSMICG00000042585) #30 ENSMICG00000039388 #34 PCDHB14 (ENSMICG00000035051) #36 PCDHGA4 (ENSMICG00000011479) PCDHGA9 (ENSMICG00000047125) DIAPH1 (ENSMICG00000011482) HDAC3 (ENSMICG00000017449) RELL2 (ENSMICG00000017450) FCHSD1 (ENSMICG00000017451) Lemuriformes_a ANCESTRAL SPECIES 13 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00960000186917 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161185 #30 ENSGT00940000163433 ENSGT00940000163469 ENSGT00940000164011 ENSGT00940000164093 #33 ENSGT00940000163508 #34 ENSGT00940000163201 Coquerels sifaka MODERN SPECIES 852 ANKHD1 (ENSPCOG00000028558) #9 EIF4EBP3 (ENSPCOG00000014289) SRA1 (ENSPCOG00000010221) #10 APBB3 (ENSPCOG00000015470) #11 ENSPCOG00000027426 CD14 (ENSPCOG00000022838) #14 TMCO6 (ENSPCOG00000014352) #16 ENSPCOG00000028037 #18 IK (ENSPCOG00000017840) #17 WDR55 (ENSPCOG00000022432) #19 DND1 (ENSPCOG00000022204) #20 HARS1 (ENSPCOG00000027592) #21 HARS2 (ENSPCOG00000022041) #22 ZMAT2 (ENSPCOG00000020829) #23 PCDHA2 (ENSPCOG00000021548) ENSPCOG00000010236 #24 PCDHA13 (ENSPCOG00000024610) Greater bamboo lemur MODERN SPECIES 284 PFDN1 (ENSPSMG00000019270) HBEGF (ENSPSMG00000019274) SLC4A9 (ENSPSMG00000019289) #7 ANKHD1 (ENSPSMG00000019505) #9 SRA1 (ENSPSMG00000019602) #10 APBB3 (ENSPSMG00000019682) #11 ENSPSMG00000019763 SLC35A4 (ENSPSMG00000019766) #12 CD14 (ENSPSMG00000019788) #14 TMCO6 (ENSPSMG00000019851) #16 NDUFA2 (ENSPSMG00000019873) #18 IK (ENSPSMG00000020005) #17 WDR55 (ENSPSMG00000020043) #19 DND1 (ENSPSMG00000020048) #20 HARS1 (ENSPSMG00000020199) #21 HARS2 (ENSPSMG00000020485) #22 ZMAT2 (ENSPSMG00000020699) #23 ENSPSMG00000020702 PCDHAC1 (ENSPSMG00000020744) ENSPSMG00000020749 PCDHB1 (ENSPSMG00000020756) #27 PCDHB2 (ENSPSMG00000020767) PCDHB4 (ENSPSMG00000020775) #30 PCDHB3 (ENSPSMG00000020781) #29 PCDHB7 (ENSPSMG00000020786) PCDHB13 (ENSPSMG00000020791) PCDHB16 (ENSPSMG00000020800) #33 ENSPSMG00000020816 #34 ENSPSMG00000020822 PCDHB14 (ENSPSMG00000020835) #36 ENSPSMG00000020839 Bushbaby MODERN SPECIES 118 CYSTM1 (ENSOGAG00000003374) ENSOGAG00000003376 HBEGF (ENSOGAG00000003377) SLC4A9 (ENSOGAG00000003589) #7 ANKHD1 (ENSOGAG00000014263) #9 SRA1 (ENSOGAG00000025549) #10 APBB3 (ENSOGAG00000014274) #11 SLC35A4 (ENSOGAG00000032808) #12 CD14 (ENSOGAG00000014280) #14 TMCO6 (ENSOGAG00000014285) #16 NDUFA2 (ENSOGAG00000027727) #18 IK (ENSOGAG00000014281) #17 WDR55 (ENSOGAG00000033796) #19 DND1 (ENSOGAG00000033318) #20 HARS1 (ENSOGAG00000002050) #21 HARS2 (ENSOGAG00000002052) #22 ZMAT2 (ENSOGAG00000002054) #23 PCDHA2 (ENSOGAG00000029087) ENSOGAG00000031601 ENSOGAG00000024809 PCDHA10 (ENSOGAG00000030636) PCDHA12 (ENSOGAG00000032591) PCDHAC2 (ENSOGAG00000034904) #25 PCDHB1 (ENSOGAG00000005468) #27 PCDHB5 (ENSOGAG00000011372) PCDHB13 (ENSOGAG00000011387) PCDHB14 (ENSOGAG00000011385) #36 ENSOGAG00000011382 #34 PCDHB15 (ENSOGAG00000027699) ENSOGAG00000011389 PCDHGA1 (ENSOGAG00000011390) Euarchontoglires_A ANCESTRAL SPECIES 8 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000164036 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 Glires ANCESTRAL SPECIES 7 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903 ENSGT00940000164036 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000162745 #27 Rodentia ANCESTRAL SPECIES 7 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903 ENSGT00940000163312 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193 #29 Rodentia_B ANCESTRAL SPECIES 4 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000164036 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 Myomorpha ANCESTRAL SPECIES 5 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000164036 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 Muroidea ANCESTRAL SPECIES 4 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163903.c.a ENSGT00390000008200 ENSGT00940000163903.c.b ENSGT00940000163312 ENSGT00940000164036 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 Muroidea_A ANCESTRAL SPECIES 18 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846.a #24 ENSGT00940000164408 ENSGT00940000163903.c.a ENSGT00940000163903.c.b ENSGT00390000008200.s ENSGT00940000163312 ENSGT00940000164036 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 Cricetidae ANCESTRAL SPECIES 18 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a.b #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164089 ENSGT00940000163846.a #24 ENSGT00940000164408 ENSGT00940000163903.c.a ENSGT00390000008200.s ENSGT00940000163903.c.b ENSGT00940000163312 ENSGT00940000164036 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000157793.n Cricetinae ANCESTRAL SPECIES 14 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a.b #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164408 ENSGT00940000163312 ENSGT00940000164036 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161185 #30 ENSGT00940000157793.m ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 ENSGT00940000164011 ENSGT00940000164093 #33 ENSGT00940000163508 #34 Chinese hamster chok1gshd MODERN SPECIES 92 Ankhd1 (ENSCGRG00001015164) #9 Sra1 (ENSCGRG00001005557) #10 Eif4ebp3 (ENSCGRG00001014184) Apbb3 (ENSCGRG00001019043) #11 ENSCGRG00001014343 Slc35a4 (ENSCGRG00001003358) #12 E230025N22Rik (ENSCGRG00001005820) ENSCGRG00001005508 Cd14 (ENSCGRG00001007873) #14 Tmco6 (ENSCGRG00001014120) #16 ENSCGRG00001022607 #18 ENSCGRG00001008041 #17 Wdr55 (ENSCGRG00001014049) #19 Dnd1 (ENSCGRG00001017900) #20 Hars (ENSCGRG00001003521) #21 Hars2 (ENSCGRG00001011372) #22 Zmat2 (ENSCGRG00001023749) #23 Pcdha1 (ENSCGRG00001000258) Pcdhac2 (ENSCGRG00001015653) #25 ENSCGRG00001006214 Pcdha9 (ENSCGRG00001019026) ENSCGRG00001018110 ENSCGRG00001020360 Pcdhb1 (ENSCGRG00001009517) #27 ENSCGRG00001006454 Pcdhb2 (ENSCGRG00001021174) ENSCGRG00001010009 ENSCGRG00001000591 #30 ENSCGRG00001011604 ENSCGRG00001019427 #30 ENSCGRG00001023910 Golden Hamster MODERN SPECIES 634 Ankhd1 (ENSMAUG00000000909) #9 Eif4ebp3 (ENSMAUG00000015124) Sra1 (ENSMAUG00000012789) #10 ENSMAUG00000017144 #11 ENSMAUG00000017010 Slc35a4 (ENSMAUG00000017981) #12 E230025N22Rik (ENSMAUG00000017725) Cd14 (ENSMAUG00000017176) #14 Tmco6 (ENSMAUG00000016479) #16 Ndufa2 (ENSMAUG00000015843) #18 Ik (ENSMAUG00000011681) #17 Wdr55 (ENSMAUG00000002457) #19 Dnd1 (ENSMAUG00000019312) #20 Hars (ENSMAUG00000015021) #21 Hars2 (ENSMAUG00000018784) #22 Zmat2 (ENSMAUG00000016579) #23 Pcdha5 (ENSMAUG00000018094) Pcdha9 (ENSMAUG00000016125) Pcdhac2 (ENSMAUG00000013761) #25 Pcdhb1 (ENSMAUG00000017973) #27 Pcdhb2 (ENSMAUG00000010785) ENSMAUG00000009646 Pcdhb14 (ENSMAUG00000007891) #31 Pcdhb15 (ENSMAUG00000004599) Pcdhb18 (ENSMAUG00000020120) #34 Pcdhb21 (ENSMAUG00000020032) Pcdhb22 (ENSMAUG00000019829) Pcdhga1 (ENSMAUG00000017717) Pcdhga3 (ENSMAUG00000017598) Pcdhga4 (ENSMAUG00000017243) Cricetidae_B ANCESTRAL SPECIES 15 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a.b #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164089 ENSGT00940000163846.a #24 ENSGT00940000164408 ENSGT00940000163903.c.a ENSGT00390000008200.s ENSGT00940000163903.c.b ENSGT00940000163312 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000157793.n ENSGT00940000161185 #30 Northern American deer mouse MODERN SPECIES 10 Slc4a9 (ENSPEMG00000010356) #7 Ankhd1 (ENSPEMG00000022614) #9 Eif4ebp3 (ENSPEMG00000030655) Sra1 (ENSPEMG00000000489) #10 Apbb3 (ENSPEMG00000013849) #11 ENSPEMG00000027066 Slc35a4 (ENSPEMG00000028615) #12 E230025N22Rik (ENSPEMG00000012125) Tmco6 (ENSPEMG00000007871) #16 Ik (ENSPEMG00000012214) #17 Wdr55 (ENSPEMG00000017600) #19 ENSPEMG00000026826 #20 Hars (ENSPEMG00000007577) #21 ENSPEMG00000024534 #19 ENSPEMG00000026907 #20 Hars2 (ENSPEMG00000014993) #22 Zmat2 (ENSPEMG00000010300) #23 ENSPEMG00000024748 Pcdhac2 (ENSPEMG00000023816) #25 ENSPEMG00000002311 ENSPEMG00000023316 Pcdhb1 (ENSPEMG00000002290) #27 Pcdhb3 (ENSPEMG00000023425) #29 ENSPEMG00000013166 ENSPEMG00000022362 ENSPEMG00000008222 #30 ENSPEMG00000012718 Pcdhb14 (ENSPEMG00000024404) #31 Pcdhb15 (ENSPEMG00000007936) Pcdhb19 (ENSPEMG00000016208) ENSPEMG00000025896 Prairie vole MODERN SPECIES 5 Hbegf (ENSMOCG00000011201) Slc4a9 (ENSMOCG00000001504) #7 Ankhd1 (ENSMOCG00000009220) #9 Eif4ebp3 (ENSMOCG00000021408) Sra1 (ENSMOCG00000008156) #10 Apbb3 (ENSMOCG00000018381) #11 Slc35a4 (ENSMOCG00000015009) #12 E230025N22Rik (ENSMOCG00000020033) Cd14 (ENSMOCG00000007005) #14 Tmco6 (ENSMOCG00000019750) #16 Ndufa2 (ENSMOCG00000022078) #18 Ik (ENSMOCG00000021915) #17 Wdr55 (ENSMOCG00000015796) #19 Dnd1 (ENSMOCG00000018076) #20 Hars (ENSMOCG00000021826) #21 Hars2 (ENSMOCG00000013944) #22 Zmat2 (ENSMOCG00000012659) #23 Pcdha1 (ENSMOCG00000018957) Pcdha3 (ENSMOCG00000001657) Pcdha4 (ENSMOCG00000001186) #24 Pcdha5 (ENSMOCG00000015779) Pcdha6 (ENSMOCG00000003208) ENSMOCG00000021671 ENSMOCG00000018058 Pcdhac1 (ENSMOCG00000006144) Pcdhac2 (ENSMOCG00000014493) #25 Pcdhb1 (ENSMOCG00000001255) #27 ENSMOCG00000018014 ENSMOCG00000019432 #30 ENSMOCG00000001310 ENSMOCG00000018360 Murinae ANCESTRAL SPECIES 17 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846.a #24 ENSGT00940000164408 ENSGT00940000163903.c.a ENSGT00390000008200.s ENSGT00940000163312 ENSGT00940000164036 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 Mus ANCESTRAL SPECIES 19 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846.a #24 ENSGT00940000164408.a ENSGT00940000163903.c.a ENSGT00940000163312.p.b ENSGT00940000164408.b ENSGT00940000163312.p.a ENSGT00940000164036 ENSGT00940000163846.b #24 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000165142 Mus_A ANCESTRAL SPECIES 19 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846.a #24 ENSGT00940000164408.a ENSGT00940000163903.c.a ENSGT00940000163312.p.b ENSGT00940000164408.b ENSGT00940000163312.p.a ENSGT00940000164036 ENSGT00940000163846.b #24 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000165142 Mus_B ANCESTRAL SPECIES 19 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846.a #24 ENSGT00940000164408.a ENSGT00940000163903.c.a ENSGT00940000163312.p.b ENSGT00940000163312.p.a ENSGT00940000164036 ENSGT00940000163846.b #24 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 Mouse MODERN SPECIES 9 Slc4a9 (ENSMUSG00000024485) #7 Ankhd1 (ENSMUSG00000024483) #9 Maskbp3 (ENSMUSG00000117942) Eif4ebp3 (ENSMUSG00000090264) Sra1 (ENSMUSG00000006050) #10 Apbb3 (ENSMUSG00000117679) #11 Slc35a4 (ENSMUSG00000033272) #12 E230025N22Rik (ENSMUSG00000044719) Cd14 (ENSMUSG00000051439) #14 Tmco6 (ENSMUSG00000006850) #16 Ndufa2 (ENSMUSG00000014294) #18 Ik (ENSMUSG00000024474) #17 Wdr55 (ENSMUSG00000042660) #19 Dnd1 (ENSMUSG00000044595) #20 Hars (ENSMUSG00000001380) #21 Hars2 (ENSMUSG00000019143) #22 Zmat2 (ENSMUSG00000001383) #23 Pcdha1 (ENSMUSG00000103442) Pcdha2 (ENSMUSG00000104148) Pcdha3 (ENSMUSG00000102312) Pcdha4 (ENSMUSG00000104252) #24 Gm37013 (ENSMUSG00000103458) Pcdha5 (ENSMUSG00000103092) Pcdha6 (ENSMUSG00000103707) Gm38666 (ENSMUSG00000102836) Pcdha7 (ENSMUSG00000104318) Gm37388 (ENSMUSG00000103125) Pcdha8 (ENSMUSG00000103800) Pcdha9 (ENSMUSG00000103770) Pcdha10 (ENSMUSG00000007440) #24 Pcdha11 (ENSMUSG00000102206) Mus_C ANCESTRAL SPECIES 16 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846.a #24 ENSGT00940000164408.a ENSGT00940000163312.p.a ENSGT00940000164036 ENSGT00940000163846.b #24 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 spretus MODERN SPECIES 9 Pfdn1 (MGP_SPRETEiJ_G0023036) Hbegf (MGP_SPRETEiJ_G0023037) Slc4a9 (MGP_SPRETEiJ_G0023038) #7 Ankhd1 (MGP_SPRETEiJ_G0023039) #9 Eif4ebp3 (MGP_SPRETEiJ_G0023040) Apbb3 (MGP_SPRETEiJ_G0023041) #11 MGP_SPRETEiJ_G0023042 #12 E230025N22Rik (MGP_SPRETEiJ_G0023043) Cd14 (MGP_SPRETEiJ_G0023044) #14 Tmco6 (MGP_SPRETEiJ_G0023045) #16 Ndufa2 (MGP_SPRETEiJ_G0023046) #18 Ik (MGP_SPRETEiJ_G0023047) #17 Wdr55 (MGP_SPRETEiJ_G0023048) #19 Dnd1 (MGP_SPRETEiJ_G0023049) #20 Hars (MGP_SPRETEiJ_G0023050) #21 Hars2 (MGP_SPRETEiJ_G0023051) #22 Zmat2 (MGP_SPRETEiJ_G0023052) #23 MGP_SPRETEiJ_G0023053 Pcdha1 (MGP_SPRETEiJ_G0023054) Pcdha2 (MGP_SPRETEiJ_G0023055) Pcdha3 (MGP_SPRETEiJ_G0023056) MGP_SPRETEiJ_G0023057 #24 MGP_SPRETEiJ_G0023058 #24 MGP_SPRETEiJ_G0023059 Pcdha8 (MGP_SPRETEiJ_G0023060) Pcdha9 (MGP_SPRETEiJ_G0023061) Pcdha10 (MGP_SPRETEiJ_G0023062) #24 Pcdha11 (MGP_SPRETEiJ_G0023063) Pcdha12 (MGP_SPRETEiJ_G0023064) Pcdhac1 (MGP_SPRETEiJ_G0023065) Pcdhac2 (MGP_SPRETEiJ_G0023066) #25 Steppe mouse MODERN SPECIES 2841 Ankhd1 (ENSMSIG00000029982) #9 ENSMSIG00000031650 ENSMSIG00000031651 #10 Eif4ebp3 (ENSMSIG00000031654) Apbb3 (ENSMSIG00000031665) #11 ENSMSIG00000031668 Slc35a4 (ENSMSIG00000031671) #12 E230025N22Rik (ENSMSIG00000031672) Cd14 (ENSMSIG00000031676) #14 Tmco6 (ENSMSIG00000031677) #16 Ndufa2 (ENSMSIG00000031679) #18 Ik (ENSMSIG00000031680) #17 Wdr55 (ENSMSIG00000031682) #19 Dnd1 (ENSMSIG00000031684) #20 Hars (ENSMSIG00000031685) #21 Hars2 (ENSMSIG00000031687) #22 Zmat2 (ENSMSIG00000031688) #23 Pcdha1 (ENSMSIG00000031696) Pcdha2 (ENSMSIG00000031698) Pcdha3 (ENSMSIG00000031700) Ryukyu mouse MODERN SPECIES 9 Pfdn1 (MGP_CAROLIEiJ_G0022124) Hbegf (MGP_CAROLIEiJ_G0022125) Slc4a9 (MGP_CAROLIEiJ_G0022126) #7 Ankhd1 (MGP_CAROLIEiJ_G0022127) #9 Eif4ebp3 (MGP_CAROLIEiJ_G0022128) Apbb3 (MGP_CAROLIEiJ_G0022129) #11 Slc35a4 (MGP_CAROLIEiJ_G0022130) #12 E230025N22Rik (MGP_CAROLIEiJ_G0022131) Cd14 (MGP_CAROLIEiJ_G0022132) #14 Tmco6 (MGP_CAROLIEiJ_G0022133) #16 Ndufa2 (MGP_CAROLIEiJ_G0022134) #18 Ik (MGP_CAROLIEiJ_G0022135) #17 Wdr55 (MGP_CAROLIEiJ_G0022136) #19 Dnd1 (MGP_CAROLIEiJ_G0022137) #20 Hars (MGP_CAROLIEiJ_G0022138) #21 Hars2 (MGP_CAROLIEiJ_G0022139) #22 Zmat2 (MGP_CAROLIEiJ_G0022140) #23 Pcdha1 (MGP_CAROLIEiJ_G0022141) Pcdha2 (MGP_CAROLIEiJ_G0022142) Pcdha3 (MGP_CAROLIEiJ_G0022143) MGP_CAROLIEiJ_G0022144 #24 MGP_CAROLIEiJ_G0022145 #24 Pcdha5 (MGP_CAROLIEiJ_G0022146) MGP_CAROLIEiJ_G0022147 MGP_CAROLIEiJ_G0022148 MGP_CAROLIEiJ_G0022149 Pcdha8 (MGP_CAROLIEiJ_G0022150) Pcdha9 (MGP_CAROLIEiJ_G0022151) Pcdha10 (MGP_CAROLIEiJ_G0022152) #24 Pcdha11 (MGP_CAROLIEiJ_G0022153) Pcdha12 (MGP_CAROLIEiJ_G0022154) Shrew mouse MODERN SPECIES 6 Pfdn1 (MGP_PahariEiJ_G0018858) Hbegf (MGP_PahariEiJ_G0018859) Slc4a9 (MGP_PahariEiJ_G0018860) #7 Ankhd1 (MGP_PahariEiJ_G0018861) #9 Eif4ebp3 (MGP_PahariEiJ_G0018862) Apbb3 (MGP_PahariEiJ_G0018863) #11 Slc35a4 (MGP_PahariEiJ_G0018864) #12 E230025N22Rik (MGP_PahariEiJ_G0018865) Cd14 (MGP_PahariEiJ_G0018866) #14 Tmco6 (MGP_PahariEiJ_G0018867) #16 Ndufa2 (MGP_PahariEiJ_G0018868) #18 Ik (MGP_PahariEiJ_G0018869) #17 Wdr55 (MGP_PahariEiJ_G0018870) #19 Dnd1 (MGP_PahariEiJ_G0018871) #20 Hars (MGP_PahariEiJ_G0018872) #21 Hars2 (MGP_PahariEiJ_G0018873) #22 Zmat2 (MGP_PahariEiJ_G0018874) #23 Pcdha1 (MGP_PahariEiJ_G0018875) Pcdha2 (MGP_PahariEiJ_G0018876) Pcdha3 (MGP_PahariEiJ_G0018877) MGP_PahariEiJ_G0018878 #24 MGP_PahariEiJ_G0018879 #24 Pcdha5 (MGP_PahariEiJ_G0018880) Pcdha6 (MGP_PahariEiJ_G0018881) MGP_PahariEiJ_G0018882 Pcdha7 (MGP_PahariEiJ_G0018883) MGP_PahariEiJ_G0018884 Pcdha8 (MGP_PahariEiJ_G0018885) Pcdha9 (MGP_PahariEiJ_G0018886) Pcdha10 (MGP_PahariEiJ_G0018887) #24 Pcdha11 (MGP_PahariEiJ_G0018888) Rat MODERN SPECIES 9 Pfdn1 (ENSRNOG00000018653) Hbegf (ENSRNOG00000018646) Slc4a9 (ENSRNOG00000018525) #7 Eif4ebp3 (ENSRNOG00000030247) #9 Sra1 (ENSRNOG00000018089) #10 Apbb3 (ENSRNOG00000017849) #11 Slc35a4 (ENSRNOG00000002908) #12 RGD1565779 (ENSRNOG00000066557) ENSRNOG00000064875 Cd14 (ENSRNOG00000017819) #14 Tmco6 (ENSRNOG00000017718) #16 Ndufa2 (ENSRNOG00000017571) #18 Wdr55 (ENSRNOG00000017251) #19 Dnd1 (ENSRNOG00000016894) #20 Hars1 (ENSRNOG00000028105) #21 Zmat2 (ENSRNOG00000016087) #22 Pcdha5 (ENSRNOG00000020119) #25 ENSRNOG00000063467 Pcdhb1 (ENSRNOG00000020103) #27 Pcdhb2 (ENSRNOG00000039476) Pcdhb3 (ENSRNOG00000020095) #29 Pcdhb5 (ENSRNOG00000020084) #30 Pcdhb7 (ENSRNOG00000046264) #30 Pcdhb8 (ENSRNOG00000020073) ENSRNOG00000063843 Pcdhb9 (ENSRNOG00000020072) #30 Pcdhb10 (ENSRNOG00000029244) Pcdhb11 (ENSRNOG00000020066) Pcdhb12 (ENSRNOG00000033719) Pcdhb6l (ENSRNOG00000020062) LOC108348201 (ENSRNOG00000020054) Upper Galilee mountains blind mole rat MODERN SPECIES 922 ENSNGAG00000009119 #9 Eif4ebp3 (ENSNGAG00000016353) Sra1 (ENSNGAG00000017765) #10 Apbb3 (ENSNGAG00000018901) #11 ENSNGAG00000020792 Slc35a4 (ENSNGAG00000007770) #12 E230025N22Rik (ENSNGAG00000021337) Cd14 (ENSNGAG00000022646) #14 Tmco6 (ENSNGAG00000023279) #16 Ndufa2 (ENSNGAG00000023938) #18 Ik (ENSNGAG00000002719) #17 Wdr55 (ENSNGAG00000018082) #19 Dnd1 (ENSNGAG00000018511) #20 Hars (ENSNGAG00000019799) #21 Hars2 (ENSNGAG00000000750) #22 Zmat2 (ENSNGAG00000009406) #23 Pcdha1 (ENSNGAG00000007675) Pcdha2 (ENSNGAG00000011038) Pcdha3 (ENSNGAG00000009239) ENSNGAG00000010860 #24 Pcdha5 (ENSNGAG00000014115) Pcdha6 (ENSNGAG00000015840) ENSNGAG00000017405 ENSNGAG00000009546 Pcdha9 (ENSNGAG00000010166) ENSNGAG00000018352 Pcdha12 (ENSNGAG00000019551) Pcdhac1 (ENSNGAG00000021466) Pcdhac2 (ENSNGAG00000021791) #25 Pcdhb1 (ENSNGAG00000010987) #27 Lesser Egyptian jerboa MODERN SPECIES 48 Slc4a9 (ENSJJAG00000001802) #7 Ankhd1 (ENSJJAG00000017997) #9 Eif4ebp3 (ENSJJAG00000016625) Sra1 (ENSJJAG00000014326) #10 Apbb3 (ENSJJAG00000000643) #11 ENSJJAG00000021749 Slc35a4 (ENSJJAG00000005636) #12 E230025N22Rik (ENSJJAG00000022274) Cd14 (ENSJJAG00000012492) #14 Tmco6 (ENSJJAG00000024300) #16 Ndufa2 (ENSJJAG00000023853) #18 Ik (ENSJJAG00000000529) #17 Wdr55 (ENSJJAG00000023700) #19 Dnd1 (ENSJJAG00000023986) #20 Hars (ENSJJAG00000022965) #21 Hars2 (ENSJJAG00000014458) #22 ENSJJAG00000003703 #23 Kangaroo rat MODERN SPECIES 369 Cystm1 (ENSDORG00000025347) Pfdn1 (ENSDORG00000028430) Hbegf (ENSDORG00000012536) ENSDORG00000024160 Slc4a9 (ENSDORG00000012541) #7 Ankhd1 (ENSDORG00000001160) #9 Apbb3 (ENSDORG00000001164) #11 ENSDORG00000025601 Slc35a4 (ENSDORG00000001165) #12 Tmco6 (ENSDORG00000006580) #16 Ndufa2 (ENSDORG00000006581) #18 ENSDORG00000006584 #17 Wdr55 (ENSDORG00000014551) #19 Dnd1 (ENSDORG00000014552) #20 Hars (ENSDORG00000014553) #21 Hars2 (ENSDORG00000014555) #22 Zmat2 (ENSDORG00000014559) #23 Pcdha3 (ENSDORG00000026940) Pcdha6 (ENSDORG00000026516) ENSDORG00000023369 Pcdhac2 (ENSDORG00000027887) #25 Pcdhb1 (ENSDORG00000002729) #27 ENSDORG00000029763 ENSDORG00000029862 #29 ENSDORG00000003601 ENSDORG00000027539 ENSDORG00000023172 #31 Pcdhb19 (ENSDORG00000029764) Pcdhb21 (ENSDORG00000011185) Taf7 (ENSDORG00000029372) Pcdhgb1 (ENSDORG00000027602) Rodentia_A ANCESTRAL SPECIES 7 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200 ENSGT00940000163903 ENSGT00940000164036 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 ENSGT00940000164011 ENSGT00940000164093 #33 Hystricomorpha ANCESTRAL SPECIES 27 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163312 ENSGT00940000164882 ENSGT00940000163333 ENSGT00940000161185 #30 ENSGT00940000157793.h ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 ENSGT00940000164011 ENSGT00940000164093 #33 ENSGT00940000163508 #34 Hystricomorpha_a ANCESTRAL SPECIES 24 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000163312 ENSGT00940000164882 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161185 #30 ENSGT00940000157793.h ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 ENSGT00940000164011 ENSGT00940000164093 #33 ENSGT00940000163508 #34 ENSGT00940000163201 Guinea pig MODERN SPECIES 6 SLC4A9 (ENSCPOG00000010350) #7 ANKHD1 (ENSCPOG00000011805) #9 EIF4EBP3 (ENSCPOG00000033979) SRA1 (ENSCPOG00000020210) #10 APBB3 (ENSCPOG00000006384) #11 ENSCPOG00000031899 SLC35A4 (ENSCPOG00000006402) #12 ENSCPOG00000024495 CD14 (ENSCPOG00000025223) #14 TMCO6 (ENSCPOG00000009172) #16 NDUFA2 (ENSCPOG00000009178) #18 IK (ENSCPOG00000009179) #17 WDR55 (ENSCPOG00000009190) #19 DND1 (ENSCPOG00000009192) #20 HARS1 (ENSCPOG00000009197) #21 HARS2 (ENSCPOG00000009203) #22 ZMAT2 (ENSCPOG00000037729) #23 PCDHAC1 (ENSCPOG00000009738) ENSCPOG00000040697 PCDHA11 (ENSCPOG00000035848) PCDHB1 (ENSCPOG00000001922) #27 ENSCPOG00000032216 PCDHB4 (ENSCPOG00000030153) #30 ENSCPOG00000030349 #30 PCDHB7 (ENSCPOG00000031892) ENSCPOG00000031156 #34 ENSCPOG00000001688 PCDHB15 (ENSCPOG00000036858) TAF7 (ENSCPOG00000034331) PCDHGA1 (ENSCPOG00000020995) PCDHGA6 (ENSCPOG00000030704) Hystricomorpha_b ANCESTRAL SPECIES 50 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 Long-tailed chinchilla MODERN SPECIES 125 SLC4A9 (ENSCLAG00000003623) #7 ANKHD1 (ENSCLAG00000003465) #9 EIF4EBP3 (ENSCLAG00000003391) SRA1 (ENSCLAG00000003359) #10 APBB3 (ENSCLAG00000003294) #11 ENSCLAG00000003261 SLC35A4 (ENSCLAG00000017727) #12 ENSCLAG00000006382 CD14 (ENSCLAG00000011992) #14 TMCO6 (ENSCLAG00000011852) #16 NDUFA2 (ENSCLAG00000011804) #18 IK (ENSCLAG00000012944) #17 WDR55 (ENSCLAG00000012803) #19 DND1 (ENSCLAG00000012746) #20 HARS1 (ENSCLAG00000012601) #21 HARS2 (ENSCLAG00000012334) #22 ZMAT2 (ENSCLAG00000017314) #23 Degu DUPLICATION Degu MODERN SPECIES 210 ENSODEG00000002830 ANKHD1 (ENSODEG00000002733) #9 EIF4EBP3 (ENSODEG00000004026) SRA1 (ENSODEG00000003997) #10 ENSODEG00000003982 #11 ENSODEG00000003539 SLC35A4 (ENSODEG00000018919) #12 ENSODEG00000003419 CD14 (ENSODEG00000003404) #14 TMCO6 (ENSODEG00000003263) #16 ENSODEG00000003215 #18 ENSODEG00000003854 #17 WDR55 (ENSODEG00000003673) #19 ENSODEG00000003591 #20 ENSODEG00000002634 #21 ENSODEG00000002558 #22 ZMAT2 (ENSODEG00000002444) #23 ENSODEG00000002374 Degu MODERN SPECIES 233 ROR2 (ENSODEG00000001285) ENSODEG00000018624 NFIL3 (ENSODEG00000018647) AUH (ENSODEG00000000932) SYK (ENSODEG00000000792) ENSODEG00000000742 ENSODEG00000018655 ENSODEG00000018615 GADD45G (ENSODEG00000000725) SEMA4D (ENSODEG00000000714) ENSODEG00000000699 SECISBP2 (ENSODEG00000000675) ENSODEG00000000659 SHC3 (ENSODEG00000000614) S1PR3 (ENSODEG00000018606) ENSODEG00000000572 #22 NXNL2 (ENSODEG00000000550) SPIN1 (ENSODEG00000001589) Naked mole-rat female MODERN SPECIES 25 PFDN1 (ENSHGLG00000035690) ENSHGLG00000018639 SLC4A9 (ENSHGLG00000014520) #7 ENSHGLG00000034741 ENSHGLG00000021134 ANKHD1 (ENSHGLG00000016064) #9 EIF4EBP3 (ENSHGLG00000036581) SRA1 (ENSHGLG00000041135) #10 APBB3 (ENSHGLG00000011129) #11 SLC35A4 (ENSHGLG00000006436) #12 CD14 (ENSHGLG00000040499) #14 IK (ENSHGLG00000004862) #17 WDR55 (ENSHGLG00000008338) #19 DND1 (ENSHGLG00000009358) #20 HARS1 (ENSHGLG00000004453) #21 HARS2 (ENSHGLG00000006165) #22 ZMAT2 (ENSHGLG00000008187) #23 ENSHGLG00000046282 ENSHGLG00000037379 ENSHGLG00000036057 ENSHGLG00000049357 ENSHGLG00000037658 PCDHAC2 (ENSHGLG00000005853) #25 PCDHB2 (ENSHGLG00000007925) PCDHB6 (ENSHGLG00000009739) ENSHGLG00000017815 #31 PCDHB5 (ENSHGLG00000038543) ENSHGLG00000015342 ENSHGLG00000042757 SLC25A2 (ENSHGLG00000021391) #37 TAF7 (ENSHGLG00000050349) Sciuridae ANCESTRAL SPECIES 18 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000163903 ENSGT00940000164036 ENSGT00390000008200.x ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 ENSGT00940000164011 ENSGT00940000164093 #33 Marmotini ANCESTRAL SPECIES 23 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.fb #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000163903 ENSGT00940000164036 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000157793.f.a ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 ENSGT00940000164011 ENSGT00940000164093 #33 ENSGT00940000163508 #34 ENSGT00940000163201 Alpin marmot MODERN SPECIES PFDN1 (ENSMMMG00000010271) HBEGF (ENSMMMG00000010280) SLC4A9 (ENSMMMG00000010288) #7 ANKHD1 (ENSMMMG00000010548) #9 EIF4EBP3 (ENSMMMG00000010610) APBB3 (ENSMMMG00000010626) #11 ENSMMMG00000010657 SLC35A4 (ENSMMMG00000010659) #12 CD14 (ENSMMMG00000010676) #14 TMCO6 (ENSMMMG00000010677) #16 ENSMMMG00000010699 #18 IK (ENSMMMG00000010705) #17 WDR55 (ENSMMMG00000010722) #19 DND1 (ENSMMMG00000010736) #20 HARS1 (ENSMMMG00000010747) #21 HARS2 (ENSMMMG00000010764) #22 ZMAT2 (ENSMMMG00000010817) #23 PCDHAC2 (ENSMMMG00000010851) #25 ENSMMMG00000011282 PCDHA10 (ENSMMMG00000011292) PCDHB1 (ENSMMMG00000011303) #27 PCDHB2 (ENSMMMG00000011310) PCDHB3 (ENSMMMG00000011314) #29 ENSMMMG00000011326 ENSMMMG00000011331 ENSMMMG00000011349 PCDHB4 (ENSMMMG00000011353) #30 ENSMMMG00000011371 ENSMMMG00000011393 #31 PCDHB7 (ENSMMMG00000011398) PCDHB13 (ENSMMMG00000011404) Marmotini_b ANCESTRAL SPECIES 16 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.fb #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200.w.a ENSGT00940000164036 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000157793.f.b ENSGT00940000157793.e.a ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00940000157793.f.a ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 ENSGT00940000164011 Squirrel MODERN SPECIES 131 HBEGF (ENSSTOG00000028116) SLC4A9 (ENSSTOG00000001919) #7 ANKHD1 (ENSSTOG00000001936) #9 EIF4EBP3 (ENSSTOG00000020350) SRA1 (ENSSTOG00000024229) #10 APBB3 (ENSSTOG00000001965) #11 ENSSTOG00000032302 SLC35A4 (ENSSTOG00000026149) #12 CD14 (ENSSTOG00000001977) #14 TMCO6 (ENSSTOG00000028988) #16 ENSSTOG00000022532 #18 IK (ENSSTOG00000001980) #17 WDR55 (ENSSTOG00000024223) #19 DND1 (ENSSTOG00000002000) #20 HARS1 (ENSSTOG00000002007) #21 HARS2 (ENSSTOG00000002016) #22 ZMAT2 (ENSSTOG00000002025) #23 Arctic ground squirrel MODERN SPECIES 29 HBEGF (ENSUPAG00010007010) SLC4A9 (ENSUPAG00010007028) #7 ANKHD1 (ENSUPAG00010007490) #9 EIF4EBP3 (ENSUPAG00010007533) SRA1 (ENSUPAG00010007542) #10 APBB3 (ENSUPAG00010007552) #11 ENSUPAG00010007570 SLC35A4 (ENSUPAG00010007573) #12 CD14 (ENSUPAG00010007599) #14 TMCO6 (ENSUPAG00010007603) #16 ENSUPAG00010007617 #18 IK (ENSUPAG00010007621) #17 WDR55 (ENSUPAG00010007647) #19 DND1 (ENSUPAG00010007650) #20 HARS1 (ENSUPAG00010007659) #21 HARS2 (ENSUPAG00010007685) #22 PCDHAC2 (ENSUPAG00010007747) #25 ENSUPAG00010008029 PCDHA10 (ENSUPAG00010008030) PCDHB1 (ENSUPAG00010008038) #27 PCDHB2 (ENSUPAG00010008039) ENSUPAG00010008052 ENSUPAG00010008056 PCDHB4 (ENSUPAG00010008061) #30 PCDHB6 (ENSUPAG00010008069) ENSUPAG00010008071 #31 PCDHB7 (ENSUPAG00010008073) PCDHB13 (ENSUPAG00010008078) PCDHB16 (ENSUPAG00010008082) #33 ENSUPAG00010008088 #34 PCDHB14 (ENSUPAG00010008097) #36 Eurasian red squirrel MODERN SPECIES 15 HBEGF (ENSSVLG00005022906) SLC4A9 (ENSSVLG00005022479) #7 ANKHD1 (ENSSVLG00005022311) #9 EIF4EBP3 (ENSSVLG00005022238) SRA1 (ENSSVLG00005022207) #10 APBB3 (ENSSVLG00005022127) #11 ENSSVLG00005022063 SLC35A4 (ENSSVLG00005022047) #12 CD14 (ENSSVLG00005022015) #14 TMCO6 (ENSSVLG00005021859) #16 ENSSVLG00005021813 #18 IK (ENSSVLG00005021647) #17 WDR55 (ENSSVLG00005021589) #19 DND1 (ENSSVLG00005021541) #20 HARS1 (ENSSVLG00005021378) #21 HARS2 (ENSSVLG00005020869) #22 ENSSVLG00005020736 #23 ENSSVLG00005020676 ENSSVLG00005020630 ENSSVLG00005020614 ENSSVLG00005020598 PCDHAC2 (ENSSVLG00005019928) #25 ENSSVLG00005019568 PCDHB1 (ENSSVLG00005019449) #27 ENSSVLG00005019345 PCDHB3 (ENSSVLG00005019267) #29 ENSSVLG00005019194 ENSSVLG00005019110 #30 ENSSVLG00005019088 ENSSVLG00005019038 ENSSVLG00005019014 Lagomorpha ANCESTRAL SPECIES 3 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT01090000260204 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000164093 #33 ENSGT00940000163508 #34 ENSGT00940000168418 #35 ENSGT00940000163424 #37 ENSGT00940000160861 ENSGT00940000163837.B Rabbit MODERN SPECIES 14 HBEGF (ENSOCUG00000015909) SLC4A9 (ENSOCUG00000015920) #7 ANKHD1 (ENSOCUG00000015943) #9 EIF4EBP3 (ENSOCUG00000034094) ENSOCUG00000021569 #10 APBB3 (ENSOCUG00000009817) #11 ENSOCUG00000032814 SLC35A4 (ENSOCUG00000009816) #12 CD14 (ENSOCUG00000004218) #14 TMCO6 (ENSOCUG00000004236) #16 NDUFA2 (ENSOCUG00000004237) #18 IK (ENSOCUG00000004223) #17 WDR55 (ENSOCUG00000026709) #19 DND1 (ENSOCUG00000004240) #20 HARS1 (ENSOCUG00000004243) #21 HARS2 (ENSOCUG00000004250) #22 ZMAT2 (ENSOCUG00000004255) #23 ENSOCUG00000030751 PCDHAC2 (ENSOCUG00000008769) #25 ENSOCUG00000031387 ENSOCUG00000002575 ENSOCUG00000032864 ENSOCUG00000035800 PCDHB1 (ENSOCUG00000007406) #27 ENSOCUG00000038861 ENSOCUG00000004563 ENSOCUG00000033336 PCDHB4 (ENSOCUG00000004555) #30 PCDHB5 (ENSOCUG00000004558) PCDHB16 (ENSOCUG00000039460) #33 ENSOCUG00000010930 #34 Tree shrew MODERN SPECIES 862 CYSTM1 (ENSTBEG00000001488) HBEGF (ENSTBEG00000001725) SLC4A9 (ENSTBEG00000002352) #7 ANKHD1 (ENSTBEG00000003619) #9 ENSTBEG00000005500 #16 NDUFA2 (ENSTBEG00000005978) #18 WDR55 (ENSTBEG00000006347) #19 DND1 (ENSTBEG00000006754) #20 HARS1 (ENSTBEG00000006968) #21 HARS2 (ENSTBEG00000007467) #22 ENSTBEG00000007828 #23 Laurasiatheria ANCESTRAL SPECIES 8 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000163903 ENSGT00940000164036 ENSGT00940000164882 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 Eulipotyphla ANCESTRAL SPECIES 13 ENSGT00940000153768.b #9 ENSGT00390000000002.a.a.b #11 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00940000153727.b #17 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 Common shrew MODERN SPECIES 1015 ANKHD1 (ENSSARG00000007287) #9 APBB3 (ENSSARG00000007360) #11 SLC35A4 (ENSSARG00000007375) #12 CD14 (ENSSARG00000007380) #14 IK (ENSSARG00000007388) #17 ENSSARG00000007399 #16 NDUFA2 (ENSSARG00000007407) #18 DND1 (ENSSARG00000007411) #20 HARS1 (ENSSARG00000007413) #21 HARS2 (ENSSARG00000007427) #22 Hedgehog MODERN SPECIES 2113 WDR55 (ENSEEUG00000004281) #19 DND1 (ENSEEUG00000004338) #20 HARS1 (ENSEEUG00000004415) #21 HARS2 (ENSEEUG00000004539) #22 Laurasiatheria_a ANCESTRAL SPECIES 9 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000163903 ENSGT00940000164036 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 Artiodactyla ANCESTRAL SPECIES 8 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000163903 ENSGT00940000164882 ENSGT00940000164036 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 Suina ANCESTRAL SPECIES 11 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000163312 ENSGT00940000164882 ENSGT00940000165479 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00900000143298 ENSGT00940000161193 #29 ENSGT01090000260204.a.a.b ENSGT00940000163362 #36 ENSGT01090000260204.a.b Pig MODERN SPECIES 10 SLC4A9 (ENSSSCG00000014363) #7 ANKHD1 (ENSSSCG00000014364) #9 EIF4EBP3 (ENSSSCG00000059551) SRA1 (ENSSSCG00000055768) #10 APBB3 (ENSSSCG00000014366) #11 ENSSSCG00000044155 SLC35A4 (ENSSSCG00000014367) #12 ENSSSCG00000014368 CD14 (ENSSSCG00000014369) #14 TMCO6 (ENSSSCG00000014370) #16 NDUFA2 (ENSSSCG00000014371) #18 IK (ENSSSCG00000014372) #17 WDR55 (ENSSSCG00000032062) #19 DND1 (ENSSSCG00000014374) #20 HARS1 (ENSSSCG00000014375) #21 HARS2 (ENSSSCG00000014376) #22 ZMAT2 (ENSSSCG00000029158) #23 PCDHAC2 (ENSSSCG00000029281) #25 ENSSSCG00000042156 PCDHA3 (ENSSSCG00000061745) ENSSSCG00000039859 ENSSSCG00000057570 ENSSSCG00000025603 ENSSSCG00000029442 ENSSSCG00000058260 ENSSSCG00000037515 ENSSSCG00000058366 ENSSSCG00000055269 ENSSSCG00000049531 ENSSSCG00000058913 PCDHA13 (ENSSSCG00000028030) Chacoan peccary MODERN SPECIES 913 HBEGF (ENSCWAG00000008556) SLC4A9 (ENSCWAG00000008616) #7 ANKHD1 (ENSCWAG00000009009) #9 EIF4EBP3 (ENSCWAG00000009189) SRA1 (ENSCWAG00000009227) #10 APBB3 (ENSCWAG00000009272) #11 ENSCWAG00000009424 SLC35A4 (ENSCWAG00000009469) #12 CD14 (ENSCWAG00000009491) #14 TMCO6 (ENSCWAG00000009518) #16 NDUFA2 (ENSCWAG00000009579) #18 IK (ENSCWAG00000009630) #17 WDR55 (ENSCWAG00000009743) #19 DND1 (ENSCWAG00000009782) #20 HARS1 (ENSCWAG00000009837) #21 HARS2 (ENSCWAG00000010142) #22 ZMAT2 (ENSCWAG00000010763) #23 PCDHA1 (ENSCWAG00000010823) ENSCWAG00000010912 ENSCWAG00000010936 #24 PCDHA5 (ENSCWAG00000010956) ENSCWAG00000010975 ENSCWAG00000011059 ENSCWAG00000011075 PCDHAC2 (ENSCWAG00000011094) #25 PCDHB1 (ENSCWAG00000011189) #27 ENSCWAG00000011205 ENSCWAG00000011235 PCDHB3 (ENSCWAG00000011256) #29 ENSCWAG00000011289 PCDHB14 (ENSCWAG00000011309) #36 Artiodactyla_a ANCESTRAL SPECIES 7 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00390000008200.f ENSGT00940000163903 ENSGT00390000008200.e.b ENSGT00940000163312 ENSGT00940000164882 ENSGT00940000164036 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00390000008200.f ENSGT00940000163903 ENSGT00390000008200.e.b ENSGT00940000163312 ENSGT00940000164036 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00960000186917 Cetacea ANCESTRAL SPECIES 1 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200.e.b.b.b ENSGT00940000164747 ENSGT00940000164089 ENSGT00390000008200.e.b.a.b ENSGT00390000008200.e.b.a.a.a.b ENSGT00940000163312 ENSGT00390000008200.e.b.a.a.a.a.b.a ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT01090000260204.a.a.b ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161193 #29 Odontoceti ANCESTRAL SPECIES 1 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200.e.b.b.b ENSGT00940000164747 ENSGT00940000164089 ENSGT00390000008200.e.b.a.b ENSGT00390000008200.e.b.a.a.a.b ENSGT00940000163312 ENSGT00390000008200.e.b.a.a.a.a.b.a ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT01090000260204.a.a.b ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161193 #29 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.p #18 ENSGT00390000006178.o #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164747 ENSGT00940000164089 ENSGT00390000008200.e.b.a.b ENSGT00940000165479 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT01090000260204.a.a.b ENSGT00940000164011 ENSGT00940000164093 #33 ENSGT00940000163362 #36 ENSGT00940000163954 ENSGT00940000162842 ENSGT00940000163424 #37 ENSGT00940000160861.c.a Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT01010000228540 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.p #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712.e #23 ENSGT00390000008200.e.b.b.b ENSGT00940000165479 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT01090000260204.a.a.b ENSGT00940000164093 #33 ENSGT00940000163362 #36 ENSGT00940000163954 ENSGT00940000162842 ENSGT00940000163424 #37 ENSGT00940000160861.d ENSGT00940000159725.l ENSGT00940000164906 ENSGT00940000165041 Monodontidae ANCESTRAL SPECIES 7 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT01010000228540 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.p #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712.e #23 ENSGT00390000008200.e.b.b.b ENSGT00940000165479 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT01090000260204.a.a.b ENSGT01090000260204.a.a.a ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163362 #36 ENSGT00940000163424 #37 ENSGT00940000160861.d ENSGT00940000159725.l ENSGT00940000164906 Beluga whale MODERN SPECIES 34 HBEGF (ENSDLEG00000005405) SLC4A9 (ENSDLEG00000005426) #7 ANKHD1 (ENSDLEG00000005662) #9 SRA1 (ENSDLEG00000006306) #10 APBB3 (ENSDLEG00000006320) #11 ENSDLEG00000006390 ENSDLEG00000006408 SLC35A4 (ENSDLEG00000006412) #12 CD14 (ENSDLEG00000006416) #14 TMCO6 (ENSDLEG00000000144) #16 NDUFA2 (ENSDLEG00000000298) #18 IK (ENSDLEG00000000321) #17 WDR55 (ENSDLEG00000000395) #19 DND1 (ENSDLEG00000000417) #20 HARS1 (ENSDLEG00000000481) #21 HARS2 (ENSDLEG00000000760) #22 ENSDLEG00000001019 #23 ENSDLEG00000001043 PCDHA2 (ENSDLEG00000001064) ENSDLEG00000001135 PCDHA13 (ENSDLEG00000001149) PCDHAC2 (ENSDLEG00000001163) #25 PCDHB1 (ENSDLEG00000001183) #27 PCDHB15 (ENSDLEG00000001201) PCDHB14 (ENSDLEG00000001245) #36 ENSDLEG00000001344 #37 PCDHGA2 (ENSDLEG00000001349) PCDHGA3 (ENSDLEG00000001357) PCDHGA5 (ENSDLEG00000001366) PCDHGB3 (ENSDLEG00000001378) ENSDLEG00000001463 Narwhal MODERN SPECIES 298 HBEGF (ENSMMNG00015000720) SLC4A9 (ENSMMNG00015000761) #7 ANKHD1 (ENSMMNG00015000921) #9 EIF4EBP3 (ENSMMNG00015001098) SRA1 (ENSMMNG00015001114) #10 APBB3 (ENSMMNG00015001198) #11 ENSMMNG00015001341 SLC35A4 (ENSMMNG00015001351) #12 CD14 (ENSMMNG00015001369) #14 TMCO6 (ENSMMNG00015001390) #16 NDUFA2 (ENSMMNG00015001429) #18 IK (ENSMMNG00015001473) #17 WDR55 (ENSMMNG00015001531) #19 DND1 (ENSMMNG00015001560) #20 HARS1 (ENSMMNG00015001637) #21 HARS2 (ENSMMNG00015001750) #22 ENSMMNG00015001890 #23 ENSMMNG00015001920 PCDHAC2 (ENSMMNG00015001954) #25 ENSMMNG00015001994 PCDHA3 (ENSMMNG00015002008) ENSMMNG00015002033 ENSMMNG00015002067 ENSMMNG00015002109 ENSMMNG00015002131 ENSMMNG00015002155 ENSMMNG00015002171 #27 ENSMMNG00015002187 ENSMMNG00015002201 #31 ENSMMNG00015002223 ENSMMNG00015002237 #30 Vaquita MODERN SPECIES 14 HBEGF (ENSPSNG00000011755) ENSPSNG00000011656 #7 ANKHD1 (ENSPSNG00000011482) #9 EIF4EBP3 (ENSPSNG00000011416) SRA1 (ENSPSNG00000011312) #10 APBB3 (ENSPSNG00000010584) #11 ENSPSNG00000010492 ENSPSNG00000010450 CD14 (ENSPSNG00000010424) #14 TMCO6 (ENSPSNG00000010357) #16 NDUFA2 (ENSPSNG00000010299) #18 IK (ENSPSNG00000010172) #17 WDR55 (ENSPSNG00000010108) #19 DND1 (ENSPSNG00000010011) #20 HARS1 (ENSPSNG00000009786) #21 HARS2 (ENSPSNG00000003489) #22 ZMAT2 (ENSPSNG00000003301) #23 ENSPSNG00000003288 ENSPSNG00000003279 ENSPSNG00000003264 ENSPSNG00000003254 ENSPSNG00000003236 ENSPSNG00000003223 ENSPSNG00000003217 ENSPSNG00000003206 ENSPSNG00000003193 ENSPSNG00000003183 ENSPSNG00000003173 ENSPSNG00000003160 PCDHAC2 (ENSPSNG00000003013) #25 ENSPSNG00000002858 Dolphin MODERN SPECIES 2291 ENSTTRG00000001755 #20 HARS1 (ENSTTRG00000001760) #21 HARS2 (ENSTTRG00000001771) #22 ZMAT2 (ENSTTRG00000001777) #23 PCDHA2 (ENSTTRG00000001785) ENSTTRG00000001812 PCDHA12 (ENSTTRG00000001821) Sperm whale MODERN SPECIES 19 ENSPCTG00005018819 PFDN1 (ENSPCTG00005018921) ANKHD1 (ENSPCTG00005018994) #9 EIF4EBP3 (ENSPCTG00005019077) SRA1 (ENSPCTG00005019114) #10 APBB3 (ENSPCTG00005019171) #11 ENSPCTG00005019730 SLC35A4 (ENSPCTG00005019755) #12 CD14 (ENSPCTG00005019771) #14 TMCO6 (ENSPCTG00005019801) #16 NDUFA2 (ENSPCTG00005019842) #18 IK (ENSPCTG00005019904) #17 WDR55 (ENSPCTG00005020077) #19 DND1 (ENSPCTG00005020106) #20 HARS (ENSPCTG00005000404) #21 HARS2 (ENSPCTG00005000529) #22 ZMAT2 (ENSPCTG00005000626) #23 ENSPCTG00005000663 PCDHAC2 (ENSPCTG00005000764) #25 ENSPCTG00005001040 ENSPCTG00005001057 ENSPCTG00005001067 ENSPCTG00005001078 ENSPCTG00005001093 ENSPCTG00005001101 ENSPCTG00005001111 ENSPCTG00005001119 ENSPCTG00005001131 ENSPCTG00005001137 ENSPCTG00005001145 ENSPCTG00005001151 Blue whale MODERN SPECIES 14 HBEGF (ENSBMSG00010000125) SLC4A9 (ENSBMSG00010000180) #7 ANKHD1 (ENSBMSG00010000466) #9 EIF4EBP3 (ENSBMSG00010000927) SRA1 (ENSBMSG00010000944) #10 APBB3 (ENSBMSG00010001042) #11 SLC35A4 (ENSBMSG00010001275) #12 ENSBMSG00010001283 CD14 (ENSBMSG00010001298) #14 TMCO6 (ENSBMSG00010001310) #16 NDUFA2 (ENSBMSG00010001334) #18 IK (ENSBMSG00010001362) #17 WDR55 (ENSBMSG00010001394) #19 DND1 (ENSBMSG00010001404) #20 HARS1 (ENSBMSG00010001483) #21 HARS2 (ENSBMSG00010001652) #22 ZMAT2 (ENSBMSG00010001832) #23 ENSBMSG00010001854 PCDHA2 (ENSBMSG00010001862) ENSBMSG00010001878 ENSBMSG00010001885 PCDHAC2 (ENSBMSG00010001991) #25 ENSBMSG00010002253 ENSBMSG00010002268 ENSBMSG00010002281 ENSBMSG00010002295 ENSBMSG00010002316 ENSBMSG00010002327 ENSBMSG00010002347 ENSBMSG00010002364 ENSBMSG00010002381 Pecora ANCESTRAL SPECIES ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164747 ENSGT00390000008200.f ENSGT00940000163312 ENSGT00940000164036 ENSGT00940000165479 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161185 #30 Percora_a ANCESTRAL SPECIES ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00390000008200.f ENSGT00940000163312 ENSGT00940000164036 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161185 #30 Bovidae ANCESTRAL SPECIES ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200.f.d ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161185 #30 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163508.f #34 ENSGT00940000163894 ENSGT00940000163469 ENSGT00940000164011 ENSGT00940000164093 #33 Caprinae ANCESTRAL SPECIES 3 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00960000186917 ENSGT00940000161185 #30 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163508.f #34 ENSGT00940000163894 ENSGT00940000163469 ENSGT00940000164011 ENSGT00940000163508.e #34 Rambouillet Sheep MODERN SPECIES 21 HBEGF (ENSOARG00020020934) SLC4A9 (ENSOARG00020020984) #7 ANKHD1 (ENSOARG00020021597) #9 EIF4EBP3 (ENSOARG00020022277) SRA1 (ENSOARG00020022305) #10 APBB3 (ENSOARG00020022354) #11 ENSOARG00020022454 SLC35A4 (ENSOARG00020022487) #12 CD14 (ENSOARG00020022493) #14 TMCO6 (ENSOARG00020022518) #16 NDUFA2 (ENSOARG00020022560) #18 IK (ENSOARG00020022605) #17 WDR55 (ENSOARG00020022644) #19 DND1 (ENSOARG00020022668) #20 HARS (ENSOARG00020022713) #21 HARS2 (ENSOARG00020009907) #22 ZMAT2 (ENSOARG00020013261) #23 PCDHAC2 (ENSOARG00020013410) #25 ENSOARG00020014803 ENSOARG00020014814 ENSOARG00020014815 ENSOARG00020014829 ENSOARG00020014899 ENSOARG00020014984 ENSOARG00020014990 ENSOARG00020015011 ENSOARG00020015032 PCDHB1 (ENSOARG00020015075) #27 ENSOARG00020015100 PCDHB4 (ENSOARG00020015260) #30 ENSOARG00020015293 #31 Goat MODERN SPECIES 26 HBEGF (ENSCHIG00000022689) SLC4A9 (ENSCHIG00000015915) #7 ANKHD1 (ENSCHIG00000016020) #9 EIF4EBP3 (ENSCHIG00000026608) SRA1 (ENSCHIG00000013652) #10 APBB3 (ENSCHIG00000019518) #11 ENSCHIG00000025738 SLC35A4 (ENSCHIG00000012468) #12 CD14 (ENSCHIG00000011350) #14 TMCO6 (ENSCHIG00000012882) #16 NDUFA2 (ENSCHIG00000027231) #18 IK (ENSCHIG00000008932) #17 WDR55 (ENSCHIG00000018807) #19 DND1 (ENSCHIG00000026376) #20 HARS1 (ENSCHIG00000018288) #21 HARS2 (ENSCHIG00000009904) #22 ZMAT2 (ENSCHIG00000014775) #23 PCDHA2 (ENSCHIG00000012794) PCDHA3 (ENSCHIG00000017022) PCDHA4 (ENSCHIG00000015750) #24 ENSCHIG00000017345 ENSCHIG00000026502 PCDHA10 (ENSCHIG00000021311) PCDHA12 (ENSCHIG00000017341) PCDHAC1 (ENSCHIG00000023589) ENSCHIG00000008421 PCDHAC2 (ENSCHIG00000017560) #25 PCDHB1 (ENSCHIG00000012052) #27 ENSCHIG00000019176 PCDHB4 (ENSCHIG00000001103) #30 PCDHB6 (ENSCHIG00000009935) Bovinae ANCESTRAL SPECIES 2 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.s.a #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164747 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161185 #30 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163894 ENSGT00940000163469 ENSGT00940000164011 ENSGT00940000164093 #33 ENSGT00940000163508.e #34 Bos ANCESTRAL SPECIES 3 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.s.a #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164747 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161185 #30 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163894 ENSGT00940000163469 ENSGT00940000164011 ENSGT00940000164093 #33 ENSGT00940000163508.e #34 Bos_b ANCESTRAL SPECIES 2 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.s.a #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164747 ENSGT00390000008200.f.c.b.a.b.b.a ENSGT00940000164089 ENSGT00390000008200.f.c.b.a.b.b.b ENSGT00940000163846 #24 ENSGT00390000008200.f.c.b.a.b.a ENSGT00940000163903 ENSGT00390000008200.f.c.a ENSGT00390000008200.f.c.b.a.a.a.a.b.a ENSGT00390000008200.f.c.b.a.a.a.a.a.b ENSGT00390000008200.f.c.b.b ENSGT00390000008200.f.c.b.a.a.a.a.a.a.a.a ENSGT00390000008200.f.c.b.a.a.a.b ENSGT00940000165479 Hybrid Bos Indicus MODERN SPECIES 26 HBEGF (ENSBIXG00005014069) SLC4A9 (ENSBIXG00005001917) #7 ANKHD1 (ENSBIXG00005014460) #9 EIF4EBP3 (ENSBIXG00005006372) SRA1 (ENSBIXG00005005637) #10 APBB3 (ENSBIXG00005014588) #11 ENSBIXG00005014645 SLC35A4 (ENSBIXG00005014618) #12 CD14 (ENSBIXG00005014665) #14 TMCO6 (ENSBIXG00005014688) #16 ENSBIXG00005014710 #18 IK (ENSBIXG00005014746) #17 WDR55 (ENSBIXG00005006373) #19 DND1 (ENSBIXG00005006374) #20 HARS1 (ENSBIXG00005014863) #21 HARS2 (ENSBIXG00005002218) #22 ZMAT2 (ENSBIXG00005005412) #23 ENSBIXG00005015157 ENSBIXG00005015178 ENSBIXG00005015187 ENSBIXG00005015191 ENSBIXG00005015198 ENSBIXG00005015208 ENSBIXG00005015217 ENSBIXG00005015235 ENSBIXG00005002235 ENSBIXG00005015244 ENSBIXG00005015254 PCDHAC2 (ENSBIXG00005006748) #25 PCDHB1 (ENSBIXG00005007143) #27 ENSBIXG00005015637 Cow MODERN SPECIES 26 HBEGF (ENSBTAG00000021766) SLC4A9 (ENSBTAG00000021775) #7 ENSBTAG00000054857 #9 ENSBTAG00000010871 #9 EIF4EBP3 (ENSBTAG00000052310) SRA1 (ENSBTAG00000001449) #10 APBB3 (ENSBTAG00000001450) #11 SLC35A4 (ENSBTAG00000030584) CD14 (ENSBTAG00000015032) #14 TMCO6 (ENSBTAG00000030589) #16 NDUFA2 (ENSBTAG00000015041) #18 IK (ENSBTAG00000015034) #17 WDR55 (ENSBTAG00000015042) #19 DND1 (ENSBTAG00000018845) #20 HARS1 (ENSBTAG00000018847) #21 HARS2 (ENSBTAG00000025212) #22 ZMAT2 (ENSBTAG00000005441) #23 PCDHA2 (ENSBTAG00000046190) ENSBTAG00000049097 PCDHA3 (ENSBTAG00000046717) ENSBTAG00000052107 PCDHA4 (ENSBTAG00000049152) #24 ENSBTAG00000049759 ENSBTAG00000015439 ENSBTAG00000049214 ENSBTAG00000054587 ENSBTAG00000054506 ENSBTAG00000052605 ENSBTAG00000048510 ENSBTAG00000051344 PCDHA13 (ENSBTAG00000030227) Bos_a ANCESTRAL SPECIES 2 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.s.a #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200.f.c.b.a.b.b.a ENSGT00390000008200.f.c.b.a.b.b.b ENSGT00940000164408 ENSGT00390000008200.f.c.b.a.a.a.a.b.b ENSGT00940000163312 ENSGT00390000008200.f.c.b.a.a.a.a.a.a.a.b ENSGT00390000008200.f.c.b.a.a.a.a.a.a.a.a ENSGT00390000008200.f.c.b.a.a.a.b ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161185 #30 Wild yak MODERN SPECIES 1158 PFDN1 (ENSBMUG00000014909) HBEGF (ENSBMUG00000014920) SLC4A9 (ENSBMUG00000015014) #7 ANKHD1 (ENSBMUG00000015158) #9 SRA1 (ENSBMUG00000015205) #10 EIF4EBP3 (ENSBMUG00000015216) APBB3 (ENSBMUG00000015272) #11 ENSBMUG00000015392 SLC35A4 (ENSBMUG00000015411) #12 CD14 (ENSBMUG00000015420) #14 TMCO6 (ENSBMUG00000015453) #16 ENSBMUG00000015491 #18 IK (ENSBMUG00000015543) #17 WDR55 (ENSBMUG00000015570) #19 HARS1 (ENSBMUG00000015699) #21 HARS2 (ENSBMUG00000016134) #22 ZMAT2 (ENSBMUG00000016262) #23 PCDHAC2 (ENSBMUG00000016446) #25 ENSBMUG00000016539 PCDHA5 (ENSBMUG00000016547) ENSBMUG00000016572 ENSBMUG00000016584 ENSBMUG00000016605 ENSBMUG00000016621 ENSBMUG00000016635 PCDHB1 (ENSBMUG00000016651) #27 ENSBMUG00000016666 ENSBMUG00000016680 PCDHB6 (ENSBMUG00000016695) ENSBMUG00000016707 #31 ENSBMUG00000016718 Domestic yak MODERN SPECIES 27 HBEGF (ENSBGRG00000014467) SLC4A9 (ENSBGRG00000014553) #7 ANKHD1 (ENSBGRG00000015693) #9 EIF4EBP3 (ENSBGRG00000016704) SRA1 (ENSBGRG00000016751) #10 APBB3 (ENSBGRG00000016849) #11 ENSBGRG00000017965 SLC35A4 (ENSBGRG00000018014) #12 CD14 (ENSBGRG00000018040) #14 TMCO6 (ENSBGRG00000018091) #16 ENSBGRG00000018292 #18 IK (ENSBGRG00000018393) #17 WDR55 (ENSBGRG00000018638) #19 DND1 (ENSBGRG00000018749) #20 HARS1 (ENSBGRG00000018843) #21 HARS2 (ENSBGRG00000020191) #22 ZMAT2 (ENSBGRG00000021297) #23 PCDHAC2 (ENSBGRG00000021397) #25 ENSBGRG00000022009 ENSBGRG00000022033 ENSBGRG00000022041 ENSBGRG00000022074 PCDHA10 (ENSBGRG00000022089) ENSBGRG00000022125 ENSBGRG00000022162 ENSBGRG00000022532 ENSBGRG00000022544 ENSBGRG00000022564 ENSBGRG00000022576 ENSBGRG00000022590 ENSBGRG00000022604 American bison MODERN SPECIES 3206 HBEGF (ENSBBBG00000008497) SLC4A9 (ENSBBBG00000002354) #7 ANKHD1 (ENSBBBG00000012344) #9 EIF4EBP3 (ENSBBBG00000002315) SRA1 (ENSBBBG00000012282) #10 APBB3 (ENSBBBG00000012269) #11 ENSBBBG00000012186 SLC35A4 (ENSBBBG00000002292) #12 CD14 (ENSBBBG00000012180) #14 TMCO6 (ENSBBBG00000012174) #16 ENSBBBG00000012154 #18 IK (ENSBBBG00000012141) #17 WDR55 (ENSBBBG00000012117) #19 DND1 (ENSBBBG00000012101) #20 HARS1 (ENSBBBG00000012076) #21 HARS2 (ENSBBBG00000011918) #22 ZMAT2 (ENSBBBG00000011678) #23 ENSBBBG00000011668 PCDHA2 (ENSBBBG00000011662) PCDHAC2 (ENSBBBG00000011644) #25 PCDHA4 (ENSBBBG00000011524) #24 PCDHA5 (ENSBBBG00000011520) ENSBBBG00000002112 ENSBBBG00000006835 ENSBBBG00000011295 ENSBBBG00000011293 ENSBBBG00000011287 PCDHB1 (ENSBBBG00000011281) #27 ENSBBBG00000002052 ENSBBBG00000011267 PCDHB4 (ENSBBBG00000011262) #30 Siberian musk deer MODERN SPECIES 49 HBEGF (ENSMMSG00000002315) SLC4A9 (ENSMMSG00000002111) #7 ANKHD1 (ENSMMSG00000001892) #9 ENSMMSG00000001739 #10 APBB3 (ENSMMSG00000001709) #11 ENSMMSG00000001686 SLC35A4 (ENSMMSG00000001680) #12 ENSMMSG00000001668 CD14 (ENSMMSG00000001661) #14 TMCO6 (ENSMMSG00000001639) #16 NDUFA2 (ENSMMSG00000001623) #18 ENSMMSG00000001604 #17 WDR55 (ENSMMSG00000001588) #19 DND1 (ENSMMSG00000001574) #20 HARS1 (ENSMMSG00000001462) #21 HARS2 (ENSMMSG00000000917) #22 ZMAT2 (ENSMMSG00000000811) #23 ENSMMSG00000000785 ENSMMSG00000000768 ENSMMSG00000000746 PCDHA3 (ENSMMSG00000000343) PCDHA5 (ENSMMSG00000000282) ENSMMSG00000000255 PCDHA11 (ENSMMSG00000000153) ENSMMSG00000000097 PCDHA13 (ENSMMSG00000000070) ENSMMSG00000004386 PCDHAC2 (ENSMMSG00000004361) #25 ENSMMSG00000004342 PCDHB1 (ENSMMSG00000004332) #27 ENSMMSG00000004318 Yarkand deer MODERN SPECIES 32 ANKHD1 (ENSCHYG00000018958) #9 EIF4EBP3 (ENSCHYG00000020000) SRA1 (ENSCHYG00000020039) #10 APBB3 (ENSCHYG00000020143) #11 ENSCHYG00000021290 SLC35A4 (ENSCHYG00000021327) #12 ENSCHYG00000021346 CD14 (ENSCHYG00000021456) #14 ENSCHYG00000021478 TMCO6 (ENSCHYG00000021515) #16 ENSCHYG00000021747 #18 ENSCHYG00000021836 #17 WDR55 (ENSCHYG00000021976) #19 DND1 (ENSCHYG00000022050) #20 HARS1 (ENSCHYG00000022140) #21 HARS2 (ENSCHYG00000023232) #22 ZMAT2 (ENSCHYG00000023849) #23 ENSCHYG00000023915 PCDHAC2 (ENSCHYG00000023934) #25 PCDHB1 (ENSCHYG00000023997) #27 ENSCHYG00000024053 ENSCHYG00000024110 ENSCHYG00000024141 PCDHGC5 (ENSCHYG00000024191) ENSCHYG00000024579 DIAPH1 (ENSCHYG00000024635) HDAC3 (ENSCHYG00000025260) RELL2 (ENSCHYG00000025303) FCHSD1 (ENSCHYG00000000556) ARAP3 (ENSCHYG00000000730) PCDH1 (ENSCHYG00000000987) Camelidae ANCESTRAL SPECIES 1 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200.e.b ENSGT00940000163312 ENSGT00940000164882 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163469 ENSGT00940000164011 ENSGT00940000163201 ENSGT00940000163362 #36 Alpaca MODERN SPECIES 3613 ENSVPAG00000011771 #22 Arabian camel MODERN SPECIES 22 HBEGF (ENSCDRG00005020281) SLC4A9 (ENSCDRG00005019967) #7 ANKHD1 (ENSCDRG00005019648) #9 EIF4EBP3 (ENSCDRG00005019628) SRA1 (ENSCDRG00005019623) #10 APBB3 (ENSCDRG00005019186) #11 ENSCDRG00005019151 SLC35A4 (ENSCDRG00005019143) #12 CD14 (ENSCDRG00005019128) #14 TMCO6 (ENSCDRG00005019066) #16 NDUFA2 (ENSCDRG00005019021) #18 IK (ENSCDRG00005018927) #17 WDR55 (ENSCDRG00005018882) #19 DND1 (ENSCDRG00005018824) #20 HARS1 (ENSCDRG00005016848) #21 HARS2 (ENSCDRG00005013829) #22 ZMAT2 (ENSCDRG00005013705) #23 ENSCDRG00005013684 ENSCDRG00005013671 ENSCDRG00005013574 ENSCDRG00005013462 ENSCDRG00005013457 ENSCDRG00005013437 ENSCDRG00005013418 ENSCDRG00005013400 PCDHA11 (ENSCDRG00005013224) ENSCDRG00005013203 PCDHAC2 (ENSCDRG00005012672) #25 PCDHB1 (ENSCDRG00005012631) #27 ENSCDRG00005012540 ENSCDRG00005012523 Laurasiatheria_b ANCESTRAL SPECIES 9 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000164882 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00960000186917 ENSGT00900000143298 Carnivora ANCESTRAL SPECIES 8 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164089 ENSGT00940000163846 #24 ENSGT00940000164408 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000164882 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161193 #29 Caniformia ANCESTRAL SPECIES 5 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164089 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000164882 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161193 #29 ENSGT01090000260204.a.a.b ENSGT00940000161185 #30 Caniformia_b ANCESTRAL SPECIES 4 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164089 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161193 #29 ENSGT01090000260204.a.a.b ENSGT00940000161185 #30 Ursidae ANCESTRAL SPECIES 16 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164089 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 Ursus ANCESTRAL SPECIES 3 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164089 ENSGT00390000008200.g ENSGT00940000163312 ENSGT00390000008200.h ENSGT00940000165479 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00940000163333 ENSGT00900000143298 ENSGT00940000161185 #30 ENSGT00940000157793 American black bear MODERN SPECIES 2769 ENSUAMG00000004667 #17 WDR55 (ENSUAMG00000004665) #19 DND1 (ENSUAMG00000004664) #20 HARS1 (ENSUAMG00000004661) #21 HARS2 (ENSUAMG00000004656) #22 ZMAT2 (ENSUAMG00000004654) #23 ENSUAMG00000004652 PCDHA1 (ENSUAMG00000004649) ENSUAMG00000004645 PCDHA3 (ENSUAMG00000004642) ENSUAMG00000004640 ENSUAMG00000004638 Polar bear MODERN SPECIES 173 PFDN1 (ENSUMAG00000015373) HBEGF (ENSUMAG00000015364) SLC4A9 (ENSUMAG00000015246) #7 ANKHD1 (ENSUMAG00000013419) #9 EIF4EBP3 (ENSUMAG00000013279) SRA1 (ENSUMAG00000013276) #10 APBB3 (ENSUMAG00000013269) #11 ENSUMAG00000013262 SLC35A4 (ENSUMAG00000013259) #12 CD14 (ENSUMAG00000013241) #14 TMCO6 (ENSUMAG00000013237) #16 NDUFA2 (ENSUMAG00000013234) #18 IK (ENSUMAG00000013228) #17 WDR55 (ENSUMAG00000013223) #19 HARS1 (ENSUMAG00000012884) #21 HARS2 (ENSUMAG00000012858) #22 ZMAT2 (ENSUMAG00000012852) #23 PCDHA1 (ENSUMAG00000012850) ENSUMAG00000012845 PCDHA4 (ENSUMAG00000012842) #24 ENSUMAG00000012839 PCDHA5 (ENSUMAG00000012836) ENSUMAG00000012834 ENSUMAG00000012832 ENSUMAG00000012831 ENSUMAG00000012827 ENSUMAG00000012825 ENSUMAG00000012823 PCDHA11 (ENSUMAG00000012820) ENSUMAG00000012818 ENSUMAG00000012815 Giant Panda MODERN SPECIES 13 HBEGF (ENSAMEG00000029706) SLC4A9 (ENSAMEG00000011090) #7 ANKHD1 (ENSAMEG00000011018) #9 EIF4EBP3 (ENSAMEG00000029144) SRA1 (ENSAMEG00000011005) #10 APBB3 (ENSAMEG00000010977) #11 ENSAMEG00000010975 SLC35A4 (ENSAMEG00000020139) #12 CD14 (ENSAMEG00000030576) #14 TMCO6 (ENSAMEG00000010956) #16 NDUFA2 (ENSAMEG00000010954) #18 IK (ENSAMEG00000010888) #17 WDR55 (ENSAMEG00000029034) #19 DND1 (ENSAMEG00000010881) #20 HARS1 (ENSAMEG00000010837) #21 HARS2 (ENSAMEG00000010779) #22 ZMAT2 (ENSAMEG00000010766) #23 ENSAMEG00000027470 ENSAMEG00000026474 ENSAMEG00000010731 #25 ENSAMEG00000028363 ENSAMEG00000029022 ENSAMEG00000023874 ENSAMEG00000026580 ENSAMEG00000025377 ENSAMEG00000020138 #27 ENSAMEG00000030521 ENSAMEG00000024643 ENSAMEG00000028128 ENSAMEG00000028223 #29 PCDHB5 (ENSAMEG00000025553) Mustelinae ANCESTRAL SPECIES 17 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164089 ENSGT00940000165479 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00960000186917 ENSGT00900000143298 ENSGT01090000260204.a.a.b ENSGT00940000161185 #30 ENSGT00940000163433 ENSGT01030000235990 ENSGT00940000163201 ENSGT01090000260204.a.b ENSGT00940000163424 #37 American mink MODERN SPECIES 21 HBEGF (ENSNVIG00000014005) SLC4A9 (ENSNVIG00000013887) #7 ENSNVIG00000013878 ANKHD1 (ENSNVIG00000013724) #9 EIF4EBP3 (ENSNVIG00000013703) APBB3 (ENSNVIG00000013558) #11 ENSNVIG00000013548 SLC35A4 (ENSNVIG00000013539) #12 CD14 (ENSNVIG00000013525) #14 TMCO6 (ENSNVIG00000013502) #16 NDUFA2 (ENSNVIG00000013487) #18 IK (ENSNVIG00000013473) #17 WDR55 (ENSNVIG00000013456) #19 DND1 (ENSNVIG00000013444) #20 ENSNVIG00000013180 #21 HARS2 (ENSNVIG00000012976) #22 ZMAT2 (ENSNVIG00000012962) #23 ENSNVIG00000012952 PCDHAC2 (ENSNVIG00000012864) #25 PCDHB1 (ENSNVIG00000012848) #27 ENSNVIG00000012846 ENSNVIG00000012843 ENSNVIG00000012842 ENSNVIG00000012839 PCDHB4 (ENSNVIG00000012826) #30 PCDHB6 (ENSNVIG00000012823) ENSNVIG00000012808 ENSNVIG00000012805 ENSNVIG00000012769 ENSNVIG00000012762 ENSNVIG00000012759 #37 Ferret MODERN SPECIES 175 PURA (ENSMPUG00000008996) ENSMPUG00000008993 ENSMPUG00000008982 HBEGF (ENSMPUG00000008972) SLC4A9 (ENSMPUG00000008604) #7 ENSMPUG00000008565 ANKHD1 (ENSMPUG00000008542) #9 SRA1 (ENSMPUG00000008493) #10 APBB3 (ENSMPUG00000008482) #11 SLC35A4 (ENSMPUG00000019783) #12 ENSMPUG00000008463 CD14 (ENSMPUG00000008459) #14 TMCO6 (ENSMPUG00000008448) #16 WDR55 (ENSMPUG00000008443) #19 HARS1 (ENSMPUG00000008434) #21 HARS2 (ENSMPUG00000008422) #22 ZMAT2 (ENSMPUG00000008383) #23 PCDHA3 (ENSMPUG00000008368) PCDHAC2 (ENSMPUG00000008358) #25 ENSMPUG00000008352 PCDHB1 (ENSMPUG00000008344) #27 ENSMPUG00000008341 #36 SLC25A2 (ENSMPUG00000008334) #37 TAF7 (ENSMPUG00000020047) ENSMPUG00000020046 PCDHGA4 (ENSMPUG00000008329) ENSMPUG00000008327 PCDHGA7 (ENSMPUG00000008323) ENSMPUG00000008317 DIAPH1 (ENSMPUG00000008293) HDAC3 (ENSMPUG00000008187) Canidae ANCESTRAL SPECIES 29 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844.d.a.a ENSGT00390000007844.c ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.u #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a.i #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000163312 ENSGT00940000164882 ENSGT00940000164089 ENSGT00390000008200 ENSGT00940000163903 ENSGT00940000165479 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00960000186917 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163469 ENSGT00940000163362 #36 Canis_lupus ANCESTRAL SPECIES 6 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844.c ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178.u #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a.i.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000153339.b.k.b ENSGT00940000164408 ENSGT00390000008200.k ENSGT00940000165185 ENSGT00940000164089 ENSGT00390000008200.l ENSGT00940000163312 ENSGT00940000165479 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00900000143298 ENSGT00940000163333 ENSGT00940000161185 #30 ENSGT00940000157793 Dog MODERN SPECIES 11 HBEGF (ENSCAFG00845001249) SLC4A9 (ENSCAFG00845001336) #7 ENSCAFG00845001482 ANKHD1 (ENSCAFG00845001622) #9 EIF4EBP3 (ENSCAFG00845001691) APBB3 (ENSCAFG00845001716) #10 APBB3 (ENSCAFG00845001840) #11 SLC35A4 (ENSCAFG00845001883) #12 CD14 (ENSCAFG00845001909) #14 TMCO6 (ENSCAFG00845001948) #16 NDUFA2 (ENSCAFG00845001992) #18 IK (ENSCAFG00845002021) #17 WDR55 (ENSCAFG00845002039) #19 DND1 (ENSCAFG00845002066) #20 HARS1 (ENSCAFG00845002179) #21 HARS2 (ENSCAFG00845002374) #22 ZMAT2 (ENSCAFG00845002442) #23 ENSCAFG00845002466 ENSCAFG00845002576 #25 ENSCAFG00845002679 ENSCAFG00845002698 ENSCAFG00845002711 ENSCAFG00845002727 ENSCAFG00845002743 PCDHB1 (ENSCAFG00845002830) #27 ENSCAFG00845002853 ENSCAFG00845002878 PCDHB4 (ENSCAFG00845002896) #30 PCDHB5 (ENSCAFG00845002912) PCDHB6 (ENSCAFG00845002945) PCDHB7 (ENSCAFG00845002964) Dingo MODERN SPECIES 98 SLC4A9 (ENSCAFG00020002964) #7 ANKHD1 (ENSCAFG00020002077) #9 EIF4EBP3 (ENSCAFG00020001947) SRA1 (ENSCAFG00020001924) #10 APBB3 (ENSCAFG00020001619) #11 ENSCAFG00020001529 SLC35A4 (ENSCAFG00020001522) #12 CD14 (ENSCAFG00020001518) #14 TMCO6 (ENSCAFG00020001449) #16 ENSCAFG00020001429 #18 ENSCAFG00020001260 ENSCAFG00020001105 #17 WDR55 (ENSCAFG00020001074) #19 DND1 (ENSCAFG00020001055) #20 ENSCAFG00020000925 #21 HARS2 (ENSCAFG00020000485) #22 ZMAT2 (ENSCAFG00020000423) #23 ENSCAFG00020000400 ENSCAFG00020000385 PCDHA1 (ENSCAFG00020000370) ENSCAFG00020000366 PCDHA3 (ENSCAFG00020000363) ENSCAFG00020000356 PCDHA4 (ENSCAFG00020000345) #24 ENSCAFG00020000341 ENSCAFG00020000334 ENSCAFG00020000320 ENSCAFG00020000315 ENSCAFG00020000307 ENSCAFG00020000303 ENSCAFG00020000298 Red fox MODERN SPECIES 4 HBEGF (ENSVVUG00000010124) SLC4A9 (ENSVVUG00000010143) #7 ENSVVUG00000010398 ANKHD1 (ENSVVUG00000010478) #9 EIF4EBP3 (ENSVVUG00000012362) SRA1 (ENSVVUG00000012374) #10 APBB3 (ENSVVUG00000012406) #11 ENSVVUG00000012942 SLC35A4 (ENSVVUG00000012944) #12 CD14 (ENSVVUG00000012947) #14 TMCO6 (ENSVVUG00000012955) #16 NDUFA2 (ENSVVUG00000012989) #18 ENSVVUG00000013006 #19 DND1 (ENSVVUG00000013559) #20 HARS (ENSVVUG00000013620) #21 HARS2 (ENSVVUG00000015439) #22 ZMAT2 (ENSVVUG00000017308) #23 ENSVVUG00000017313 PCDHA4 (ENSVVUG00000017316) #24 ENSVVUG00000017320 ENSVVUG00000017323 PCDHA11 (ENSVVUG00000017333) PCDHAC2 (ENSVVUG00000017368) #25 PCDHB1 (ENSVVUG00000017374) #27 ENSVVUG00000017376 ENSVVUG00000017380 PCDHB5 (ENSVVUG00000017382) PCDHB6 (ENSVVUG00000017403) PCDHB7 (ENSVVUG00000017405) PCDHB14 (ENSVVUG00000017410) #36 ENSVVUG00000017412 Felidae ANCESTRAL SPECIES 6 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200.n ENSGT00940000163312 ENSGT00390000008200.m.a.b.a.a ENSGT00390000008200.m.a.a ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161193 #29 ENSGT01090000260204.a.a.b ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 Panthera ANCESTRAL SPECIES 6 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200.n ENSGT00940000163312 ENSGT00390000008200.m.a.b.a.a ENSGT00390000008200.m.a.a ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00960000186917 ENSGT00900000143298 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163786 #31 Panthera_a ANCESTRAL SPECIES 3 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225.e #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200.n ENSGT00940000163312 ENSGT00390000008200.m.a.b.a.a ENSGT00390000008200.m.a.a ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00940000163333 ENSGT00900000143298 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163469 leopard MODERN SPECIES 98 ENSPPRG00000000371 #9 ENSPPRG00000023407 ENSPPRG00000023568 #9 EIF4EBP3 (ENSPPRG00000023846) SRA1 (ENSPPRG00000023984) #10 APBB3 (ENSPPRG00000024348) #11 ENSPPRG00000013902 SLC35A4 (ENSPPRG00000017469) #12 CD14 (ENSPPRG00000012838) #14 TMCO6 (ENSPPRG00000012430) #16 NDUFA2 (ENSPPRG00000010914) #18 IK (ENSPPRG00000010062) #17 WDR55 (ENSPPRG00000009842) #19 ENSPPRG00000009501 #20 HARS1 (ENSPPRG00000008820) #21 HARS2 (ENSPPRG00000005394) #22 ZMAT2 (ENSPPRG00000004163) #23 ENSPPRG00000016942 ENSPPRG00000016933 ENSPPRG00000016918 ENSPPRG00000016902 ENSPPRG00000016886 ENSPPRG00000016862 ENSPPRG00000016846 ENSPPRG00000016834 ENSPPRG00000016801 ENSPPRG00000002775 ENSPPRG00000016785 ENSPPRG00000016771 ENSPPRG00000016740 ENSPPRG00000016692 lion MODERN SPECIES HBEGF (ENSPLOG00000002301) SLC4A9 (ENSPLOG00000002193) #7 ANKHD1 (ENSPLOG00000001996) #9 EIF4EBP3 (ENSPLOG00000001907) SRA1 (ENSPLOG00000001894) #10 APBB3 (ENSPLOG00000001795) #11 ENSPLOG00000001757 SLC35A4 (ENSPLOG00000001750) #12 CD14 (ENSPLOG00000001718) #14 TMCO6 (ENSPLOG00000001690) #16 NDUFA2 (ENSPLOG00000001666) #18 IK (ENSPLOG00000001628) #17 WDR55 (ENSPLOG00000001601) #19 ENSPLOG00000001584 #20 HARS1 (ENSPLOG00000001403) #21 HARS2 (ENSPLOG00000001136) #22 ZMAT2 (ENSPLOG00000001007) #23 ENSPLOG00000000996 ENSPLOG00000000984 ENSPLOG00000000976 ENSPLOG00000000969 ENSPLOG00000000963 PCDHAC2 (ENSPLOG00000000879) #25 PCDHB1 (ENSPLOG00000000824) #27 ENSPLOG00000000811 ENSPLOG00000000801 ENSPLOG00000000791 PCDHGC5 (ENSPLOG00000000683) DIAPH1 (ENSPLOG00000000570) HDAC3 (ENSPLOG00000000526) RELL2 (ENSPLOG00000000497) Tiger MODERN SPECIES 107 SLC4A9 (ENSPTIG00000020507) #7 ENSPTIG00000007099 #9 ENSPTIG00000009082 #9 EIF4EBP3 (ENSPTIG00000010875) SRA1 (ENSPTIG00000011361) #10 APBB3 (ENSPTIG00000012028) #11 ENSPTIG00000015182 SLC35A4 (ENSPTIG00000004896) #12 CD14 (ENSPTIG00000017126) #14 TMCO6 (ENSPTIG00000017178) #16 NDUFA2 (ENSPTIG00000018315) #18 IK (ENSPTIG00000018863) #17 WDR55 (ENSPTIG00000019838) #19 ENSPTIG00000020069 HARS1 (ENSPTIG00000020494) #21 HARS2 (ENSPTIG00000007146) #22 ZMAT2 (ENSPTIG00000008652) #23 ENSPTIG00000009491 PCDHA4 (ENSPTIG00000009710) #24 PCDHA5 (ENSPTIG00000011039) PCDHAC2 (ENSPTIG00000011988) #25 PCDHB1 (ENSPTIG00000005311) #27 ENSPTIG00000014665 ENSPTIG00000015035 ENSPTIG00000005319 PCDHB5 (ENSPTIG00000005325) PCDHB6 (ENSPTIG00000017864) ENSPTIG00000017999 #31 PCDHB13 (ENSPTIG00000018426) PCDHB16 (ENSPTIG00000005336) #33 ENSPTIG00000018803 Cat MODERN SPECIES CYSTM1 (ENSFCAG00000001271) PFDN1 (ENSFCAG00000001272) HBEGF (ENSFCAG00000001273) SLC4A9 (ENSFCAG00000001274) #7 ANKHD1 (ENSFCAG00000001275) #9 SRA1 (ENSFCAG00000035180) #10 APBB3 (ENSFCAG00000001276) #11 ENSFCAG00000039181 SLC35A4 (ENSFCAG00000001277) #12 CD14 (ENSFCAG00000001278) #14 TMCO6 (ENSFCAG00000001280) #16 NDUFA2 (ENSFCAG00000001282) #18 IK (ENSFCAG00000001279) #17 WDR55 (ENSFCAG00000031277) #19 HARS1 (ENSFCAG00000001286) #21 HARS2 (ENSFCAG00000001288) #22 ZMAT2 (ENSFCAG00000001289) #23 PCDHAC2 (ENSFCAG00000003685) #25 ENSFCAG00000042305 ENSFCAG00000041450 ENSFCAG00000042926 ENSFCAG00000043492 ENSFCAG00000040890 ENSFCAG00000042372 ENSFCAG00000037079 ENSFCAG00000045578 ENSFCAG00000040254 ENSFCAG00000041017 PCDHB1 (ENSFCAG00000003687) #27 ENSFCAG00000035393 ENSFCAG00000042151 Laurasiatheria_c ANCESTRAL SPECIES 7 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00900000143298 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 Equus ANCESTRAL SPECIES 6 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200.p ENSGT00390000008200.o ENSGT00940000163312 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00910000147044 ENSGT00900000143298 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000163786 #31 ENSGT00940000163469 ENSGT00940000164011 ENSGT01090000260204.b ENSGT00940000163508 #34 Horse MODERN SPECIES 5 SRA1 (ENSECAG00000048166) #10 APBB3 (ENSECAG00000003436) #11 SLC35A4 (ENSECAG00000004900) #12 ENSECAG00000024241 CD14 (ENSECAG00000056386) #14 ENSECAG00000039506 #16 ENSECAG00000033774 #18 ENSECAG00000038120 #17 CD14 (ENSECAG00000001784) #14 ENSECAG00000031163 #16 NDUFA2 (ENSECAG00000023131) #18 ENSECAG00000012779 #17 WDR55 (ENSECAG00000043759) #19 DND1 (ENSECAG00000059455) #20 HARS1 (ENSECAG00000021986) #21 HARS2 (ENSECAG00000014461) #22 ZMAT2 (ENSECAG00000014412) #23 ENSECAG00000049057 ENSECAG00000045572 ENSECAG00000013199 ENSECAG00000010377 PCDHB1 (ENSECAG00000001755) #27 PCDHB2 (ENSECAG00000043461) ENSECAG00000037002 #31 PCDHB14 (ENSECAG00000031230) #36 ENSECAG00000029924 PCDHGA7 (ENSECAG00000044783) ENSECAG00000036637 PCDHGC5 (ENSECAG00000016123) DIAPH1 (ENSECAG00000020822) HDAC3 (ENSECAG00000020589) Donkey MODERN SPECIES 3 PFDN1 (ENSEASG00005038284) HBEGF (ENSEASG00005016411) SLC4A9 (ENSEASG00005016424) #7 ANKHD1 (ENSEASG00005016592) #9 EIF4EBP3 (ENSEASG00005029306) SRA1 (ENSEASG00005034530) #10 SLC35A4 (ENSEASG00005032362) #12 APBB3 (ENSEASG00005017487) #11 ENSEASG00005017493 ENSEASG00005026915 #14 TMCO6 (ENSEASG00005017504) #16 NDUFA2 (ENSEASG00005017518) #18 IK (ENSEASG00005017521) #17 WDR55 (ENSEASG00005017529) #19 HARS1 (ENSEASG00005017536) #21 HARS2 (ENSEASG00005017563) #22 ZMAT2 (ENSEASG00005025162) #23 PCDHAC2 (ENSEASG00005018065) #25 ENSEASG00005031256 ENSEASG00005018081 ENSEASG00005028226 ENSEASG00005030084 PCDHB1 (ENSEASG00005018102) #27 ENSEASG00005018105 ENSEASG00005023945 ENSEASG00005018110 ENSEASG00005018120 PCDHB3 (ENSEASG00005018118) #29 ENSEASG00005033898 #31 PCDHB7 (ENSEASG00005023533) PCDHB13 (ENSEASG00005034911) Chiroptera ANCESTRAL SPECIES 1 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00900000143298 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 ENSGT00940000164011 Microchiroptera ANCESTRAL SPECIES 3 ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000165185 ENSGT00940000164747 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00900000143298 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163786 #31 ENSGT00940000163469 ENSGT00940000164011 Greater horseshoe bat MODERN SPECIES 16 HBEGF (ENSRFEG00010010763) SLC4A9 (ENSRFEG00010010874) #7 ANKHD1 (ENSRFEG00010012041) #9 EIF4EBP3 (ENSRFEG00010012240) APBB3 (ENSRFEG00010012315) #11 ENSRFEG00010012516 SLC35A4 (ENSRFEG00010012565) #12 ENSRFEG00010012587 CD14 (ENSRFEG00010012734) #14 TMCO6 (ENSRFEG00010012767) #16 NDUFA2 (ENSRFEG00010012820) #18 IK (ENSRFEG00010012945) #17 WDR55 (ENSRFEG00010013236) #19 DND1 (ENSRFEG00010013376) #20 HARS1 (ENSRFEG00010013452) #21 HARS2 (ENSRFEG00010014579) #22 ZMAT2 (ENSRFEG00010015329) #23 PCDHAC2 (ENSRFEG00010015437) #25 PCDHB1 (ENSRFEG00010016770) #27 ENSRFEG00010016792 ENSRFEG00010016842 PCDHB3 (ENSRFEG00010016855) #29 PCDHB4 (ENSRFEG00010016878) #30 PCDHB5 (ENSRFEG00010005928) PCDHB6 (ENSRFEG00010005954) ENSRFEG00010005968 #31 PCDHB7 (ENSRFEG00010005990) ENSRFEG00010006014 PCDHB16 (ENSRFEG00010006048) #33 ENSRFEG00010006071 #34 ENSRFEG00010006092 Microbat MODERN SPECIES 965 ENSMLUG00000023421 PURA (ENSMLUG00000003093) CYSTM1 (ENSMLUG00000003105) ENSMLUG00000003106 HBEGF (ENSMLUG00000003107) SLC4A9 (ENSMLUG00000003111) #7 ANKHD1 (ENSMLUG00000003126) #9 SRA1 (ENSMLUG00000022959) #10 APBB3 (ENSMLUG00000003148) #11 SLC35A4 (ENSMLUG00000003168) #12 CD14 (ENSMLUG00000003174) #14 TMCO6 (ENSMLUG00000003184) #16 ENSMLUG00000003177 #19 DND1 (ENSMLUG00000003195) #20 ENSMLUG00000003199 #21 HARS2 (ENSMLUG00000017524) #22 ZMAT2 (ENSMLUG00000017525) #23 PCDHA1 (ENSMLUG00000013983) PCDHA2 (ENSMLUG00000013985) PCDHA10 (ENSMLUG00000016845) PCDHA11 (ENSMLUG00000014001) PCDHAC1 (ENSMLUG00000030446) PCDHAC2 (ENSMLUG00000014008) #25 PCDHB1 (ENSMLUG00000014013) #27 PCDHB2 (ENSMLUG00000010031) PCDHB5 (ENSMLUG00000010066) ENSMLUG00000022929 #31 PCDHB13 (ENSMLUG00000000910) PCDHB16 (ENSMLUG00000013737) #33 ENSMLUG00000004593 ENSMLUG00000001794 Megabat MODERN SPECIES 1164 IGIP (ENSPVAG00000009690) CYSTM1 (ENSPVAG00000009691) PFDN1 (ENSPVAG00000009692) HBEGF (ENSPVAG00000009694) SLC4A9 (ENSPVAG00000009695) #7 ANKHD1 (ENSPVAG00000009697) #9 SRA1 (ENSPVAG00000009698) #10 APBB3 (ENSPVAG00000009699) #11 CD14 (ENSPVAG00000009702) #14 IK (ENSPVAG00000009703) #17 TMCO6 (ENSPVAG00000009705) #16 NDUFA2 (ENSPVAG00000009708) #18 WDR55 (ENSPVAG00000009709) #19 DND1 (ENSPVAG00000009710) #20 HARS1 (ENSPVAG00000009711) #21 HARS2 (ENSPVAG00000009714) #22 ZMAT2 (ENSPVAG00000009717) #23 Atlantogenata ANCESTRAL SPECIES ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164747 ENSGT00390000008200 ENSGT00940000164089 ENSGT00940000163312 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000163433 ENSGT00940000163469 ENSGT00940000164011 Afrotheria ANCESTRAL SPECIES 7 ENSGT00390000009786 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200 ENSGT00940000164089 ENSGT00940000163312 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000162232 ENSGT00940000159910 ENSGT00940000160487 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000158869 ENSGT00940000155521 Tenrec MODERN SPECIES 8879 ENSETEG00000005385 #14 IK (ENSETEG00000005388) #17 ENSETEG00000005391 #18 WDR55 (ENSETEG00000005393) #19 DND1 (ENSETEG00000005397) #20 HARS1 (ENSETEG00000005399) #21 HARS2 (ENSETEG00000005403) #22 ENSETEG00000005406 #23 ENSETEG00000005411 Afrotheria_a ANCESTRAL SPECIES 7 ENSGT00390000009786 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00390000008200 ENSGT00940000164089 ENSGT00940000163312 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193 #29 ENSGT00940000162232 ENSGT00940000159910 ENSGT00940000160487 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000158869 ENSGT00940000155521 Elephant MODERN SPECIES 2 HBEGF (ENSLAFG00000008592) SLC4A9 (ENSLAFG00000001329) #7 ANKHD1 (ENSLAFG00000005337) #9 SRA1 (ENSLAFG00000020802) #10 APBB3 (ENSLAFG00000005134) #11 SLC35A4 (ENSLAFG00000021736) #12 ENSLAFG00000027299 ENSLAFG00000031861 #14 ENSLAFG00000028921 #14 TMCO6 (ENSLAFG00000013487) #16 NDUFA2 (ENSLAFG00000013494) #18 IK (ENSLAFG00000008152) #17 WDR55 (ENSLAFG00000008159) #19 DND1 (ENSLAFG00000008161) #20 HARS1 (ENSLAFG00000008163) #21 HARS2 (ENSLAFG00000018600) #22 ZMAT2 (ENSLAFG00000018601) #23 ENSLAFG00000021930 PCDHAC2 (ENSLAFG00000014281) #25 PCDHA3 (ENSLAFG00000001880) ENSLAFG00000014278 PCDHB1 (ENSLAFG00000005554) #27 PCDHB2 (ENSLAFG00000009131) PCDHB3 (ENSLAFG00000008803) #29 ENSLAFG00000001302 PCDHGC5 (ENSLAFG00000004545) DIAPH1 (ENSLAFG00000007578) ENSLAFG00000007960 RELL2 (ENSLAFG00000031336) FCHSD1 (ENSLAFG00000028321) ARAP3 (ENSLAFG00000007967) Hyrax MODERN SPECIES 5388 IK (ENSPCAG00000001243) #17 TMCO6 (ENSPCAG00000001349) #16 NDUFA2 (ENSPCAG00000001406) #18 WDR55 (ENSPCAG00000001427) #19 DND1 (ENSPCAG00000001453) #20 HARS1 (ENSPCAG00000001474) #21 HARS2 (ENSPCAG00000001548) #22 ZMAT2 (ENSPCAG00000001604) #23 Xenarthra ANCESTRAL SPECIES 33 ENSGT00390000009786 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000009262 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000164747 ENSGT00390000008200 ENSGT00940000163903 Sloth MODERN SPECIES 1261 IK (ENSCHOG00000007738) #17 ENSCHOG00000007758 HARS1 (ENSCHOG00000007766) #21 HARS2 (ENSCHOG00000007782) #22 ZMAT2 (ENSCHOG00000007795) #23 Armadillo MODERN SPECIES 3726 PFDN1 (ENSDNOG00000033107) HBEGF (ENSDNOG00000037258) SLC4A9 (ENSDNOG00000014958) #7 ANKHD1 (ENSDNOG00000014116) #9 SRA1 (ENSDNOG00000045277) #10 APBB3 (ENSDNOG00000014174) #11 ENSDNOG00000038827 SLC35A4 (ENSDNOG00000014192) #12 ENSDNOG00000048239 CD14 (ENSDNOG00000039061) #14 TMCO6 (ENSDNOG00000009762) #16 NDUFA2 (ENSDNOG00000009777) #18 ENSDNOG00000009727 #17 DND1 (ENSDNOG00000013017) #20 HARS1 (ENSDNOG00000015147) #21 HARS2 (ENSDNOG00000015148) #22 ZMAT2 (ENSDNOG00000015171) #23 ENSDNOG00000000875 ENSDNOG00000017296 ENSDNOG00000046249 ENSDNOG00000044114 Marsupialia ANCESTRAL SPECIES 9 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000163564.l.b ENSGT00940000163564.k ENSGT00390000008200 ENSGT00940000160554 #25 ENSGT00940000161193.k.b.b #29 ENSGT00970000196845 ENSGT00940000159910 ENSGT00940000160487 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000158869 ENSGT00940000155521 ENSGT00390000002137 ENSGT00940000160403 Marsupialia_b ANCESTRAL SPECIES 21 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000163564.l.b ENSGT00940000163564.k.b.a ENSGT00940000163564.k.a ENSGT00390000008200 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193.k.b.a.a.a.a.b #29 ENSGT00940000161193.k.b.a.a.a.b #29 ENSGT00940000161193.k.b.a.a.a.a.a #29 ENSGT00940000161193.k.a.a.a.a #29 ENSGT00940000161193.k.a.a.b.b #29 Diprotodontia ANCESTRAL SPECIES 57 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000163564.l.b ENSGT00940000163564.k.b.a ENSGT00940000163564.k.a ENSGT00390000008200 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193.k.b.a.a.a.a.b #29 ENSGT00940000161193.k.b.a.a.a.b #29 ENSGT00940000161193.k.b.a.a.a.a.a #29 ENSGT00940000161193.k.a.a.a.a #29 ENSGT00940000161193.k.a.a.b.b #29 Diprotodontia_a ANCESTRAL SPECIES 54 ENSGT00940000156901.A ENSGT00940000160970 #7 ENSGT00940000153768.b #9 ENSGT00940000163328 ENSGT00390000001803 #10 ENSGT00390000000002.a.a.b #11 ENSGT00390000007844 ENSGT00950000182827.F #12 ENSGT00390000005689 #14 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00940000159225 #20 ENSGT00390000005922.b.d.b.a #21 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000010712 #23 ENSGT00940000163564.l.b ENSGT00940000163564.k.b.a ENSGT00940000163564.k.a ENSGT00390000008200 ENSGT00940000160554 #25 ENSGT00940000162745 #27 ENSGT00940000163333 ENSGT00940000161193.k.b.a.a.a.a.b #29 ENSGT00940000161193.k.b.a.a.a.b.a #29 ENSGT00940000161193.k.b.a.a.a.a.a #29 ENSGT00940000161193.k.b.a.a.a.b.b #29 ENSGT01090000260204.c ENSGT00940000163362 #36 ENSGT01090000260204.d Common wonbat MODERN SPECIES 261 EIF4EBP3 (ENSVURG00010017444) SRA1 (ENSVURG00010017436) #10 APBB3 (ENSVURG00010017413) #11 ENSVURG00010017406 SLC35A4 (ENSVURG00010017404) #12 ENSVURG00010017392 #14 TMCO6 (ENSVURG00010017366) #16 NDUFA2 (ENSVURG00010017358) #18 IK (ENSVURG00010017348) #17 WDR55 (ENSVURG00010017341) #19 DND1 (ENSVURG00010017330) #20 HARS1 (ENSVURG00010017310) #21 HARS2 (ENSVURG00010016608) #22 ZMAT2 (ENSVURG00010016562) #23 ENSVURG00010016549 koala MODERN SPECIES 107 HBEGF (ENSPCIG00000016081) SLC4A9 (ENSPCIG00000016088) #7 ANKHD1 (ENSPCIG00000016104) #9 EIF4EBP3 (ENSPCIG00000017473) SRA1 (ENSPCIG00000017474) #10 APBB3 (ENSPCIG00000017478) #11 ENSPCIG00000017483 SLC35A4 (ENSPCIG00000017484) #12 ENSPCIG00000031240 #14 TMCO6 (ENSPCIG00000017486) #16 NDUFA2 (ENSPCIG00000017487) #18 IK (ENSPCIG00000017488) #17 WDR55 (ENSPCIG00000037308) #19 DND1 (ENSPCIG00000017692) #20 HARS1 (ENSPCIG00000017745) #21 HARS2 (ENSPCIG00000019291) #22 ZMAT2 (ENSPCIG00000021080) #23 ENSPCIG00000021082 ENSPCIG00000032507 ENSPCIG00000034967 ENSPCIG00000031334 PCDHAC2 (ENSPCIG00000029848) #25 ENSPCIG00000029854 #29 ENSPCIG00000035727 #29 ENSPCIG00000036469 #29 ENSPCIG00000014786 ENSPCIG00000032301 #29 ENSPCIG00000035294 #29 ENSPCIG00000034456 #29 ENSPCIG00000032902 #29 ENSPCIG00000036774 #29 Wallaby MODERN SPECIES 14439 HARS2 (ENSMEUG00000001751) #22 ZMAT2 (ENSMEUG00000001757) #23 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000021280 PFDN1 (ENSSHAG00000030589) HBEGF (ENSSHAG00000015758) SLC4A9 (ENSSHAG00000015856) #7 ANKHD1 (ENSSHAG00000016083) #9 EIF4EBP3 (ENSSHAG00000022743) APBB3 (ENSSHAG00000032009) #11 SRA1 (ENSSHAG00000016315) #10 SLC35A4 (ENSSHAG00000023193) #12 ENSSHAG00000016390 #14 TMCO6 (ENSSHAG00000016414) #16 NDUFA2 (ENSSHAG00000028938) #18 IK (ENSSHAG00000016432) #17 WDR55 (ENSSHAG00000022565) #19 HARS1 (ENSSHAG00000027068) #21 HARS2 (ENSSHAG00000016503) #22 ENSSHAG00000031663 ENSSHAG00000032119 ENSSHAG00000028572 ENSSHAG00000025775 ENSSHAG00000021552 PCDHB1 (ENSSHAG00000007367) #27 ENSSHAG00000025529 #29 ENSSHAG00000025105 #29 ENSSHAG00000031231 #29 ENSSHAG00000008137 #29 ENSSHAG00000027016 #29 ENSSHAG00000027052 #29 ENSSHAG00000022185 #29 ENSSHAG00000008675 #29 PCDHGA2 (ENSSHAG00000009569) Opossum MODERN SPECIES ENSMODG00000041122 PFDN1 (ENSMODG00000037252) HBEGF (ENSMODG00000011701) ANKHD1 (ENSMODG00000011596) #9 EIF4EBP3 (ENSMODG00000042390) APBB3 (ENSMODG00000011490) #11 ENSMODG00000023775 SLC35A4 (ENSMODG00000023774) #12 ENSMODG00000023773 #14 TMCO6 (ENSMODG00000011453) #16 NDUFA2 (ENSMODG00000011446) #18 IK (ENSMODG00000011433) #17 WDR55 (ENSMODG00000050628) #19 DND1 (ENSMODG00000041629) #20 HARS1 (ENSMODG00000011335) #21 HARS2 (ENSMODG00000011309) #22 ENSMODG00000043385 #23 ENSMODG00000038324 #23 ENSMODG00000051024 ENSMODG00000042948 PCDHAC2 (ENSMODG00000029307) #25 ENSMODG00000048521 ENSMODG00000011254 PCDHB1 (ENSMODG00000011214) #27 ENSMODG00000011237 #29 ENSMODG00000037965 #29 ENSMODG00000041649 #29 ENSMODG00000045287 #29 ENSMODG00000011065 #29 ENSMODG00000046879 #29 ENSMODG00000046322 Platypus MODERN SPECIES 85 ENSOANG00000039497 PFDN1 (ENSOANG00000050671) ENSOANG00000045779 SLC4A9 (ENSOANG00000037296) #7 ANKHD1 (ENSOANG00000001493) #9 SRA1 (ENSOANG00000046726) #10 APBB3 (ENSOANG00000020608) #11 ENSOANG00000038540 ENSOANG00000036493 #14 TMCO6 (ENSOANG00000041061) #16 ENSOANG00000011664 #18 ENSOANG00000042669 #17 WDR55 (ENSOANG00000037162) #19 DND1 (ENSOANG00000037907) #20 HARS1 (ENSOANG00000003035) #21 HARS2 (ENSOANG00000004587) #22 ZMAT2 (ENSOANG00000007213) #23 ENSOANG00000043663 ENSOANG00000045567 ENSOANG00000037137 ENSOANG00000041964 ENSOANG00000043519 ENSOANG00000007217 ENSOANG00000048806 #29 ENSOANG00000037213 #29 ENSOANG00000045109 #29 PCDHB5 (ENSOANG00000047812) ENSOANG00000038592 #29 ENSOANG00000047571 #29 ENSOANG00000007219 #29 ENSOANG00000050372 #29 Mammalia ANCESTRAL SPECIES 32 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00940000160487 ENSGT00940000159910 ENSGT00940000164266 ENSGT00940000162232 ENSGT00940000156683 ENSGT00940000159725 ENSGT00940000161193 #29 ENSGT00940000157793 ENSGT00940000160554 #25 ENSGT00940000163564 ENSGT00390000008200 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Theria ANCESTRAL SPECIES 18 ENSGT00940000160541 ENSGT00940000160487 ENSGT00940000159910 ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000156683 ENSGT00940000159725 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000163564 ENSGT00390000008200 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Eutheria ANCESTRAL SPECIES 6 ENSGT00940000163469 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000163312 ENSGT00940000164089 ENSGT00390000008200 ENSGT00940000164747 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Boreoeutheria ANCESTRAL SPECIES 9 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000164882 ENSGT00940000164036 ENSGT00940000163903 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Euarchontoglires ANCESTRAL SPECIES 8 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000164036 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000163903 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Euarchontoglires_A ANCESTRAL SPECIES 8 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000164036 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000163903 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Glires ANCESTRAL SPECIES 7 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000164036 ENSGT00940000163903 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Rodentia ANCESTRAL SPECIES 7 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000163312 ENSGT00940000163903 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Rodentia_B ANCESTRAL SPECIES 4 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000164036 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000163903 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Myomorpha ANCESTRAL SPECIES 5 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000164036 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000163903 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Muroidea ANCESTRAL SPECIES 4 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000164036 ENSGT00940000163312 ENSGT00940000163903.c.b ENSGT00390000008200 ENSGT00940000163903.c.a ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Muroidea_A ANCESTRAL SPECIES 18 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000164036 ENSGT00940000163312 ENSGT00390000008200.s ENSGT00940000163903.c.b ENSGT00940000163903.c.a ENSGT00940000164408 ENSGT00940000163846.a #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Cricetidae ANCESTRAL SPECIES 18 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000164036 ENSGT00940000163312 ENSGT00940000163903.c.b ENSGT00390000008200.s ENSGT00940000163903.c.a ENSGT00940000164408 ENSGT00940000163846.a #24 ENSGT00940000164089 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a.b #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Cricetidae_B ANCESTRAL SPECIES 15 ENSGT00940000157793.n ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000163312 ENSGT00940000163903.c.b ENSGT00390000008200.s ENSGT00940000163903.c.a ENSGT00940000164408 ENSGT00940000163846.a #24 ENSGT00940000164089 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a.b #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Northern American deer mouse MODERN SPECIES 10 Pcdhb14 (ENSPEMG00000024404) #31 ENSPEMG00000012718 ENSPEMG00000008222 #30 ENSPEMG00000022362 ENSPEMG00000013166 Pcdhb3 (ENSPEMG00000023425) #29 Pcdhb1 (ENSPEMG00000002290) #27 ENSPEMG00000023316 ENSPEMG00000002311 Pcdhac2 (ENSPEMG00000023816) #25 ENSPEMG00000024748 Zmat2 (ENSPEMG00000010300) #23 Hars2 (ENSPEMG00000014993) #22 ENSPEMG00000026907 #20 ENSPEMG00000024534 #19 Hars (ENSPEMG00000007577) #21 ENSPEMG00000026826 #20 Wdr55 (ENSPEMG00000017600) #19 Ik (ENSPEMG00000012214) #17 Tmco6 (ENSPEMG00000007871) #16 E230025N22Rik (ENSPEMG00000012125) Slc35a4 (ENSPEMG00000028615) #12 ENSPEMG00000027066 Apbb3 (ENSPEMG00000013849) #11 Sra1 (ENSPEMG00000000489) #10 Eif4ebp3 (ENSPEMG00000030655) Ankhd1 (ENSPEMG00000022614) #9 Slc4a9 (ENSPEMG00000010356) #7 Hbegf (ENSPEMG00000000469) Pfdn1 (ENSPEMG00000025003) Cystm1 (ENSPEMG00000025062) Prairie vole MODERN SPECIES 5 ENSMOCG00000001310 ENSMOCG00000019432 #30 ENSMOCG00000018014 Pcdhb1 (ENSMOCG00000001255) #27 Pcdhac2 (ENSMOCG00000014493) #25 Pcdhac1 (ENSMOCG00000006144) ENSMOCG00000018058 ENSMOCG00000021671 Pcdha6 (ENSMOCG00000003208) Pcdha5 (ENSMOCG00000015779) Pcdha4 (ENSMOCG00000001186) #24 Pcdha3 (ENSMOCG00000001657) Pcdha1 (ENSMOCG00000018957) Zmat2 (ENSMOCG00000012659) #23 Hars2 (ENSMOCG00000013944) #22 Hars (ENSMOCG00000021826) #21 Dnd1 (ENSMOCG00000018076) #20 Wdr55 (ENSMOCG00000015796) #19 Ik (ENSMOCG00000021915) #17 Ndufa2 (ENSMOCG00000022078) #18 Tmco6 (ENSMOCG00000019750) #16 Cd14 (ENSMOCG00000007005) #14 E230025N22Rik (ENSMOCG00000020033) Slc35a4 (ENSMOCG00000015009) #12 Apbb3 (ENSMOCG00000018381) #11 Sra1 (ENSMOCG00000008156) #10 Eif4ebp3 (ENSMOCG00000021408) Ankhd1 (ENSMOCG00000009220) #9 Slc4a9 (ENSMOCG00000001504) #7 Hbegf (ENSMOCG00000011201) Pfdn1 (ENSMOCG00000016407) Cricetinae ANCESTRAL SPECIES 14 ENSGT00940000164093 #33 ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793.m ENSGT00940000161185 #30 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000164036 ENSGT00940000163312 ENSGT00940000164408 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a.b #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Chinese hamster chok1gshd MODERN SPECIES 92 ENSCGRG00001019427 #30 ENSCGRG00001011604 ENSCGRG00001000591 #30 ENSCGRG00001010009 Pcdhb2 (ENSCGRG00001021174) ENSCGRG00001006454 Pcdhb1 (ENSCGRG00001009517) #27 ENSCGRG00001020360 ENSCGRG00001018110 Pcdha9 (ENSCGRG00001019026) ENSCGRG00001006214 Pcdhac2 (ENSCGRG00001015653) #25 Pcdha1 (ENSCGRG00001000258) Zmat2 (ENSCGRG00001023749) #23 Hars2 (ENSCGRG00001011372) #22 Hars (ENSCGRG00001003521) #21 Dnd1 (ENSCGRG00001017900) #20 Wdr55 (ENSCGRG00001014049) #19 ENSCGRG00001008041 #17 ENSCGRG00001022607 #18 Tmco6 (ENSCGRG00001014120) #16 Cd14 (ENSCGRG00001007873) #14 ENSCGRG00001005508 E230025N22Rik (ENSCGRG00001005820) Slc35a4 (ENSCGRG00001003358) #12 ENSCGRG00001014343 Apbb3 (ENSCGRG00001019043) #11 Eif4ebp3 (ENSCGRG00001014184) Sra1 (ENSCGRG00001005557) #10 Ankhd1 (ENSCGRG00001015164) #9 ENSCGRG00001007247 Golden Hamster MODERN SPECIES 634 Pcdhga3 (ENSMAUG00000017598) Pcdhga1 (ENSMAUG00000017717) Pcdhb22 (ENSMAUG00000019829) Pcdhb21 (ENSMAUG00000020032) Pcdhb18 (ENSMAUG00000020120) #34 Pcdhb15 (ENSMAUG00000004599) Pcdhb14 (ENSMAUG00000007891) #31 ENSMAUG00000009646 Pcdhb2 (ENSMAUG00000010785) Pcdhb1 (ENSMAUG00000017973) #27 Pcdhac2 (ENSMAUG00000013761) #25 Pcdha9 (ENSMAUG00000016125) Pcdha5 (ENSMAUG00000018094) Zmat2 (ENSMAUG00000016579) #23 Hars2 (ENSMAUG00000018784) #22 Hars (ENSMAUG00000015021) #21 Dnd1 (ENSMAUG00000019312) #20 Wdr55 (ENSMAUG00000002457) #19 Ik (ENSMAUG00000011681) #17 Ndufa2 (ENSMAUG00000015843) #18 Tmco6 (ENSMAUG00000016479) #16 Cd14 (ENSMAUG00000017176) #14 E230025N22Rik (ENSMAUG00000017725) Slc35a4 (ENSMAUG00000017981) #12 ENSMAUG00000017010 ENSMAUG00000017144 #11 Sra1 (ENSMAUG00000012789) #10 Eif4ebp3 (ENSMAUG00000015124) Ankhd1 (ENSMAUG00000000909) #9 Murinae ANCESTRAL SPECIES 17 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000164036 ENSGT00940000163312 ENSGT00390000008200.s ENSGT00940000163903.c.a ENSGT00940000164408 ENSGT00940000163846.a #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Mus ANCESTRAL SPECIES 19 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000163846.b #24 ENSGT00940000164036 ENSGT00940000163312.p.a ENSGT00940000164408.b ENSGT00940000163312.p.b ENSGT00940000163903.c.a ENSGT00940000164408.a ENSGT00940000163846.a #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Mus_A ANCESTRAL SPECIES 19 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000163846.b #24 ENSGT00940000164036 ENSGT00940000163312.p.a ENSGT00940000164408.b ENSGT00940000163312.p.b ENSGT00940000163903.c.a ENSGT00940000164408.a ENSGT00940000163846.a #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Mus_B ANCESTRAL SPECIES 19 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000163846.b #24 ENSGT00940000164036 ENSGT00940000163312.p.a ENSGT00940000163312.p.b ENSGT00940000163903.c.a ENSGT00940000164408.a ENSGT00940000163846.a #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Mouse MODERN SPECIES 9 Pcdha10 (ENSMUSG00000007440) #24 Pcdha9 (ENSMUSG00000103770) Pcdha8 (ENSMUSG00000103800) Gm37388 (ENSMUSG00000103125) Pcdha7 (ENSMUSG00000104318) Gm38666 (ENSMUSG00000102836) Pcdha6 (ENSMUSG00000103707) Pcdha5 (ENSMUSG00000103092) Gm37013 (ENSMUSG00000103458) Pcdha4 (ENSMUSG00000104252) #24 Pcdha3 (ENSMUSG00000102312) Pcdha2 (ENSMUSG00000104148) Pcdha1 (ENSMUSG00000103442) Zmat2 (ENSMUSG00000001383) #23 Hars2 (ENSMUSG00000019143) #22 Hars (ENSMUSG00000001380) #21 Dnd1 (ENSMUSG00000044595) #20 Wdr55 (ENSMUSG00000042660) #19 Ik (ENSMUSG00000024474) #17 Ndufa2 (ENSMUSG00000014294) #18 Tmco6 (ENSMUSG00000006850) #16 Cd14 (ENSMUSG00000051439) #14 E230025N22Rik (ENSMUSG00000044719) Slc35a4 (ENSMUSG00000033272) #12 Apbb3 (ENSMUSG00000117679) #11 Sra1 (ENSMUSG00000006050) #10 Eif4ebp3 (ENSMUSG00000090264) Maskbp3 (ENSMUSG00000117942) Ankhd1 (ENSMUSG00000024483) #9 Slc4a9 (ENSMUSG00000024485) #7 Hbegf (ENSMUSG00000024486) Mus_C ANCESTRAL SPECIES 16 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000163846.b #24 ENSGT00940000164036 ENSGT00940000163312.p.a ENSGT00940000164408.a ENSGT00940000163846.a #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Steppe mouse MODERN SPECIES 2841 Pcdha3 (ENSMSIG00000031700) Pcdha2 (ENSMSIG00000031698) Pcdha1 (ENSMSIG00000031696) Zmat2 (ENSMSIG00000031688) #23 Hars2 (ENSMSIG00000031687) #22 Hars (ENSMSIG00000031685) #21 Dnd1 (ENSMSIG00000031684) #20 Wdr55 (ENSMSIG00000031682) #19 Ik (ENSMSIG00000031680) #17 Ndufa2 (ENSMSIG00000031679) #18 Tmco6 (ENSMSIG00000031677) #16 Cd14 (ENSMSIG00000031676) #14 E230025N22Rik (ENSMSIG00000031672) Slc35a4 (ENSMSIG00000031671) #12 ENSMSIG00000031668 Apbb3 (ENSMSIG00000031665) #11 Eif4ebp3 (ENSMSIG00000031654) ENSMSIG00000031651 #10 ENSMSIG00000031650 Ankhd1 (ENSMSIG00000029982) #9 Slc4a9 (ENSMSIG00000029951) #7 spretus MODERN SPECIES 9 Pcdhac1 (MGP_SPRETEiJ_G0023065) Pcdha12 (MGP_SPRETEiJ_G0023064) Pcdha11 (MGP_SPRETEiJ_G0023063) Pcdha10 (MGP_SPRETEiJ_G0023062) #24 Pcdha9 (MGP_SPRETEiJ_G0023061) Pcdha8 (MGP_SPRETEiJ_G0023060) MGP_SPRETEiJ_G0023059 MGP_SPRETEiJ_G0023058 #24 MGP_SPRETEiJ_G0023057 #24 Pcdha3 (MGP_SPRETEiJ_G0023056) Pcdha2 (MGP_SPRETEiJ_G0023055) Pcdha1 (MGP_SPRETEiJ_G0023054) MGP_SPRETEiJ_G0023053 Zmat2 (MGP_SPRETEiJ_G0023052) #23 Hars2 (MGP_SPRETEiJ_G0023051) #22 Hars (MGP_SPRETEiJ_G0023050) #21 Dnd1 (MGP_SPRETEiJ_G0023049) #20 Wdr55 (MGP_SPRETEiJ_G0023048) #19 Ik (MGP_SPRETEiJ_G0023047) #17 Ndufa2 (MGP_SPRETEiJ_G0023046) #18 Tmco6 (MGP_SPRETEiJ_G0023045) #16 Cd14 (MGP_SPRETEiJ_G0023044) #14 E230025N22Rik (MGP_SPRETEiJ_G0023043) MGP_SPRETEiJ_G0023042 #12 Apbb3 (MGP_SPRETEiJ_G0023041) #11 Eif4ebp3 (MGP_SPRETEiJ_G0023040) Ankhd1 (MGP_SPRETEiJ_G0023039) #9 Slc4a9 (MGP_SPRETEiJ_G0023038) #7 Hbegf (MGP_SPRETEiJ_G0023037) Pfdn1 (MGP_SPRETEiJ_G0023036) Cystm1 (MGP_SPRETEiJ_G0023035) Ryukyu mouse MODERN SPECIES 9 Pcdha11 (MGP_CAROLIEiJ_G0022153) Pcdha10 (MGP_CAROLIEiJ_G0022152) #24 Pcdha9 (MGP_CAROLIEiJ_G0022151) Pcdha8 (MGP_CAROLIEiJ_G0022150) MGP_CAROLIEiJ_G0022149 MGP_CAROLIEiJ_G0022148 MGP_CAROLIEiJ_G0022147 Pcdha5 (MGP_CAROLIEiJ_G0022146) MGP_CAROLIEiJ_G0022145 #24 MGP_CAROLIEiJ_G0022144 #24 Pcdha3 (MGP_CAROLIEiJ_G0022143) Pcdha2 (MGP_CAROLIEiJ_G0022142) Pcdha1 (MGP_CAROLIEiJ_G0022141) Zmat2 (MGP_CAROLIEiJ_G0022140) #23 Hars2 (MGP_CAROLIEiJ_G0022139) #22 Hars (MGP_CAROLIEiJ_G0022138) #21 Dnd1 (MGP_CAROLIEiJ_G0022137) #20 Wdr55 (MGP_CAROLIEiJ_G0022136) #19 Ik (MGP_CAROLIEiJ_G0022135) #17 Ndufa2 (MGP_CAROLIEiJ_G0022134) #18 Tmco6 (MGP_CAROLIEiJ_G0022133) #16 Cd14 (MGP_CAROLIEiJ_G0022132) #14 E230025N22Rik (MGP_CAROLIEiJ_G0022131) Slc35a4 (MGP_CAROLIEiJ_G0022130) #12 Apbb3 (MGP_CAROLIEiJ_G0022129) #11 Eif4ebp3 (MGP_CAROLIEiJ_G0022128) Ankhd1 (MGP_CAROLIEiJ_G0022127) #9 Slc4a9 (MGP_CAROLIEiJ_G0022126) #7 Hbegf (MGP_CAROLIEiJ_G0022125) Pfdn1 (MGP_CAROLIEiJ_G0022124) Cystm1 (MGP_CAROLIEiJ_G0022123) Shrew mouse MODERN SPECIES 6 Pcdha10 (MGP_PahariEiJ_G0018887) #24 Pcdha9 (MGP_PahariEiJ_G0018886) Pcdha8 (MGP_PahariEiJ_G0018885) MGP_PahariEiJ_G0018884 Pcdha7 (MGP_PahariEiJ_G0018883) MGP_PahariEiJ_G0018882 Pcdha6 (MGP_PahariEiJ_G0018881) Pcdha5 (MGP_PahariEiJ_G0018880) MGP_PahariEiJ_G0018879 #24 MGP_PahariEiJ_G0018878 #24 Pcdha3 (MGP_PahariEiJ_G0018877) Pcdha2 (MGP_PahariEiJ_G0018876) Pcdha1 (MGP_PahariEiJ_G0018875) Zmat2 (MGP_PahariEiJ_G0018874) #23 Hars2 (MGP_PahariEiJ_G0018873) #22 Hars (MGP_PahariEiJ_G0018872) #21 Dnd1 (MGP_PahariEiJ_G0018871) #20 Wdr55 (MGP_PahariEiJ_G0018870) #19 Ik (MGP_PahariEiJ_G0018869) #17 Ndufa2 (MGP_PahariEiJ_G0018868) #18 Tmco6 (MGP_PahariEiJ_G0018867) #16 Cd14 (MGP_PahariEiJ_G0018866) #14 E230025N22Rik (MGP_PahariEiJ_G0018865) Slc35a4 (MGP_PahariEiJ_G0018864) #12 Apbb3 (MGP_PahariEiJ_G0018863) #11 Eif4ebp3 (MGP_PahariEiJ_G0018862) Ankhd1 (MGP_PahariEiJ_G0018861) #9 Slc4a9 (MGP_PahariEiJ_G0018860) #7 Hbegf (MGP_PahariEiJ_G0018859) Pfdn1 (MGP_PahariEiJ_G0018858) Cystm1 (MGP_PahariEiJ_G0018857) Rat DUPLICATION Rat MODERN SPECIES 9 Pcdhb6l (ENSRNOG00000020062) Pcdhb12 (ENSRNOG00000033719) Pcdhb11 (ENSRNOG00000020066) Pcdhb10 (ENSRNOG00000029244) Pcdhb9 (ENSRNOG00000020072) #30 ENSRNOG00000063843 Pcdhb8 (ENSRNOG00000020073) Pcdhb7 (ENSRNOG00000046264) #30 Pcdhb5 (ENSRNOG00000020084) #30 Pcdhb3 (ENSRNOG00000020095) #29 Pcdhb2 (ENSRNOG00000039476) Pcdhb1 (ENSRNOG00000020103) #27 ENSRNOG00000063467 Pcdha5 (ENSRNOG00000020119) #25 Zmat2 (ENSRNOG00000016087) #22 Hars1 (ENSRNOG00000028105) #21 Dnd1 (ENSRNOG00000016894) #20 Wdr55 (ENSRNOG00000017251) #19 Ndufa2 (ENSRNOG00000017571) #18 Tmco6 (ENSRNOG00000017718) #16 Cd14 (ENSRNOG00000017819) #14 ENSRNOG00000064875 RGD1565779 (ENSRNOG00000066557) Slc35a4 (ENSRNOG00000002908) #12 Apbb3 (ENSRNOG00000017849) #11 Sra1 (ENSRNOG00000018089) #10 Eif4ebp3 (ENSRNOG00000030247) #9 Slc4a9 (ENSRNOG00000018525) #7 Hbegf (ENSRNOG00000018646) Pfdn1 (ENSRNOG00000018653) Cystm1 (ENSRNOG00000018775) Rat MODERN SPECIES 6 Gpalpp1 (ENSRNOG00000001037) Nufip1 (ENSRNOG00000001033) ENSRNOG00000070802 Tsc22d1 (ENSRNOG00000001030) Serp2 (ENSRNOG00000038228) Lacc1 (ENSRNOG00000022094) Ccdc122 (ENSRNOG00000042404) Enox1 (ENSRNOG00000047817) Dnajc15 (ENSRNOG00000009063) Epsti1 (ENSRNOG00000009471) Fam216b (ENSRNOG00000021943) Tnfsf11 (ENSRNOG00000071047) Akap11 (ENSRNOG00000009987) Dgkh (ENSRNOG00000010065) Vwa8 (ENSRNOG00000053145) ENSRNOG00000064147 #21 Rgcc (ENSRNOG00000042960) ENSRNOG00000067430 Naa16 (ENSRNOG00000045863) Mtrf1 (ENSRNOG00000047106) Kbtbd7 (ENSRNOG00000064764) Kbtbd6 (ENSRNOG00000011657) Wbp4 (ENSRNOG00000011678) Elf1 (ENSRNOG00000011762) Sugt1 (ENSRNOG00000012594) ENSRNOG00000029808 AC123280.1 (ENSRNOG00000033141) Cnmd (ENSRNOG00000012821) Pcdh8 (ENSRNOG00000013101) Olfm4 (ENSRNOG00000013280) LOC306079 (ENSRNOG00000031061) Upper Galilee mountains blind mole rat MODERN SPECIES 922 Pcdhac2 (ENSNGAG00000021791) #25 Pcdhac1 (ENSNGAG00000021466) Pcdha12 (ENSNGAG00000019551) ENSNGAG00000018352 Pcdha9 (ENSNGAG00000010166) ENSNGAG00000009546 ENSNGAG00000017405 Pcdha6 (ENSNGAG00000015840) Pcdha5 (ENSNGAG00000014115) ENSNGAG00000010860 #24 Pcdha3 (ENSNGAG00000009239) Pcdha2 (ENSNGAG00000011038) Pcdha1 (ENSNGAG00000007675) Zmat2 (ENSNGAG00000009406) #23 Hars2 (ENSNGAG00000000750) #22 Hars (ENSNGAG00000019799) #21 Dnd1 (ENSNGAG00000018511) #20 Wdr55 (ENSNGAG00000018082) #19 Ik (ENSNGAG00000002719) #17 Ndufa2 (ENSNGAG00000023938) #18 Tmco6 (ENSNGAG00000023279) #16 Cd14 (ENSNGAG00000022646) #14 E230025N22Rik (ENSNGAG00000021337) Slc35a4 (ENSNGAG00000007770) #12 ENSNGAG00000020792 Apbb3 (ENSNGAG00000018901) #11 Sra1 (ENSNGAG00000017765) #10 Eif4ebp3 (ENSNGAG00000016353) ENSNGAG00000009119 #9 Lesser Egyptian jerboa MODERN SPECIES 48 ENSJJAG00000003703 #23 Hars2 (ENSJJAG00000014458) #22 Hars (ENSJJAG00000022965) #21 Dnd1 (ENSJJAG00000023986) #20 Wdr55 (ENSJJAG00000023700) #19 Ik (ENSJJAG00000000529) #17 Ndufa2 (ENSJJAG00000023853) #18 Tmco6 (ENSJJAG00000024300) #16 Cd14 (ENSJJAG00000012492) #14 E230025N22Rik (ENSJJAG00000022274) Slc35a4 (ENSJJAG00000005636) #12 ENSJJAG00000021749 Apbb3 (ENSJJAG00000000643) #11 Sra1 (ENSJJAG00000014326) #10 Eif4ebp3 (ENSJJAG00000016625) Ankhd1 (ENSJJAG00000017997) #9 Slc4a9 (ENSJJAG00000001802) #7 Hbegf (ENSJJAG00000011256) Kangaroo rat MODERN SPECIES 369 Taf7 (ENSDORG00000029372) Pcdhb21 (ENSDORG00000011185) Pcdhb19 (ENSDORG00000029764) ENSDORG00000023172 #31 ENSDORG00000027539 ENSDORG00000003601 ENSDORG00000029862 #29 ENSDORG00000029763 Pcdhb1 (ENSDORG00000002729) #27 Pcdhac2 (ENSDORG00000027887) #25 ENSDORG00000023369 Pcdha6 (ENSDORG00000026516) Pcdha3 (ENSDORG00000026940) Zmat2 (ENSDORG00000014559) #23 Hars2 (ENSDORG00000014555) #22 Hars (ENSDORG00000014553) #21 Dnd1 (ENSDORG00000014552) #20 Wdr55 (ENSDORG00000014551) #19 ENSDORG00000006584 #17 Ndufa2 (ENSDORG00000006581) #18 Tmco6 (ENSDORG00000006580) #16 Slc35a4 (ENSDORG00000001165) #12 ENSDORG00000025601 Apbb3 (ENSDORG00000001164) #11 Ankhd1 (ENSDORG00000001160) #9 Slc4a9 (ENSDORG00000012541) #7 ENSDORG00000024160 Hbegf (ENSDORG00000012536) Pfdn1 (ENSDORG00000028430) Cystm1 (ENSDORG00000025347) Igip (ENSDORG00000024838) Rodentia_A ANCESTRAL SPECIES 7 ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000164036 ENSGT00940000163903 ENSGT00390000008200 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Hystricomorpha ANCESTRAL SPECIES 27 ENSGT00940000164093 #33 ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793.h ENSGT00940000161185 #30 ENSGT00940000163333 ENSGT00940000164882 ENSGT00940000163312 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00390000008200 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Hystricomorpha_a ANCESTRAL SPECIES 24 ENSGT00940000163508 #34 ENSGT00940000164093 #33 ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793.h ENSGT00940000161185 #30 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000164882 ENSGT00940000163312 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Guinea pig MODERN SPECIES 6 PCDHGA1 (ENSCPOG00000020995) TAF7 (ENSCPOG00000034331) PCDHB15 (ENSCPOG00000036858) ENSCPOG00000001688 ENSCPOG00000031156 #34 PCDHB7 (ENSCPOG00000031892) ENSCPOG00000030349 #30 PCDHB4 (ENSCPOG00000030153) #30 ENSCPOG00000032216 PCDHB1 (ENSCPOG00000001922) #27 PCDHA11 (ENSCPOG00000035848) ENSCPOG00000040697 PCDHAC1 (ENSCPOG00000009738) ZMAT2 (ENSCPOG00000037729) #23 HARS2 (ENSCPOG00000009203) #22 HARS1 (ENSCPOG00000009197) #21 DND1 (ENSCPOG00000009192) #20 WDR55 (ENSCPOG00000009190) #19 IK (ENSCPOG00000009179) #17 NDUFA2 (ENSCPOG00000009178) #18 TMCO6 (ENSCPOG00000009172) #16 CD14 (ENSCPOG00000025223) #14 ENSCPOG00000024495 SLC35A4 (ENSCPOG00000006402) #12 ENSCPOG00000031899 APBB3 (ENSCPOG00000006384) #11 SRA1 (ENSCPOG00000020210) #10 EIF4EBP3 (ENSCPOG00000033979) ANKHD1 (ENSCPOG00000011805) #9 SLC4A9 (ENSCPOG00000010350) #7 HBEGF (ENSCPOG00000010345) Hystricomorpha_b ANCESTRAL SPECIES 50 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Long-tailed chinchilla MODERN SPECIES 125 ZMAT2 (ENSCLAG00000017314) #23 HARS2 (ENSCLAG00000012334) #22 HARS1 (ENSCLAG00000012601) #21 DND1 (ENSCLAG00000012746) #20 WDR55 (ENSCLAG00000012803) #19 IK (ENSCLAG00000012944) #17 NDUFA2 (ENSCLAG00000011804) #18 TMCO6 (ENSCLAG00000011852) #16 CD14 (ENSCLAG00000011992) #14 ENSCLAG00000006382 SLC35A4 (ENSCLAG00000017727) #12 ENSCLAG00000003261 APBB3 (ENSCLAG00000003294) #11 SRA1 (ENSCLAG00000003359) #10 EIF4EBP3 (ENSCLAG00000003391) ANKHD1 (ENSCLAG00000003465) #9 SLC4A9 (ENSCLAG00000003623) #7 HBEGF (ENSCLAG00000003788) Degu DUPLICATION Degu MODERN SPECIES 210 ENSODEG00000002374 ZMAT2 (ENSODEG00000002444) #23 ENSODEG00000002558 #22 ENSODEG00000002634 #21 ENSODEG00000003591 #20 WDR55 (ENSODEG00000003673) #19 ENSODEG00000003854 #17 ENSODEG00000003215 #18 TMCO6 (ENSODEG00000003263) #16 CD14 (ENSODEG00000003404) #14 ENSODEG00000003419 SLC35A4 (ENSODEG00000018919) #12 ENSODEG00000003539 ENSODEG00000003982 #11 SRA1 (ENSODEG00000003997) #10 EIF4EBP3 (ENSODEG00000004026) ANKHD1 (ENSODEG00000002733) #9 ENSODEG00000002830 SLC4A9 (ENSODEG00000002886) #7 Degu MODERN SPECIES 98 ENSODEG00000005465 PGM1 (ENSODEG00000005752) ENSODEG00000005033 ROR1 (ENSODEG00000004832) ENSODEG00000004610 CACHD1 (ENSODEG00000004991) RAVER2 (ENSODEG00000005253) JAK1 (ENSODEG00000004472) ENSODEG00000006541 ENSODEG00000006986 ENSODEG00000006173 LEPROT (ENSODEG00000006321) ENSODEG00000019195 LEPR (ENSODEG00000005568) PDE4B (ENSODEG00000004887) ENSODEG00000005863 #21 SGIP1 (ENSODEG00000005002) DYNLT5 (ENSODEG00000006520) ENSODEG00000005348 DNAI4 (ENSODEG00000005891) ENSODEG00000004802 SLC35D1 (ENSODEG00000005492) ENSODEG00000006396 ENSODEG00000006835 ENSODEG00000005146 GADD45A (ENSODEG00000007377) GNG12 (ENSODEG00000005519) WLS (ENSODEG00000006216) RPE65 (ENSODEG00000005046) DEPDC1 (ENSODEG00000005384) ENSODEG00000005510 Naked mole-rat female MODERN SPECIES 25 SLC25A2 (ENSHGLG00000021391) #37 ENSHGLG00000042757 ENSHGLG00000015342 PCDHB5 (ENSHGLG00000038543) ENSHGLG00000017815 #31 PCDHB6 (ENSHGLG00000009739) PCDHB2 (ENSHGLG00000007925) PCDHAC2 (ENSHGLG00000005853) #25 ENSHGLG00000037658 ENSHGLG00000049357 ENSHGLG00000036057 ENSHGLG00000037379 ENSHGLG00000046282 ZMAT2 (ENSHGLG00000008187) #23 HARS2 (ENSHGLG00000006165) #22 HARS1 (ENSHGLG00000004453) #21 DND1 (ENSHGLG00000009358) #20 WDR55 (ENSHGLG00000008338) #19 IK (ENSHGLG00000004862) #17 CD14 (ENSHGLG00000040499) #14 SLC35A4 (ENSHGLG00000006436) #12 APBB3 (ENSHGLG00000011129) #11 SRA1 (ENSHGLG00000041135) #10 EIF4EBP3 (ENSHGLG00000036581) ANKHD1 (ENSHGLG00000016064) #9 ENSHGLG00000021134 ENSHGLG00000034741 SLC4A9 (ENSHGLG00000014520) #7 ENSHGLG00000018639 PFDN1 (ENSHGLG00000035690) ENSHGLG00000009963 Sciuridae ANCESTRAL SPECIES 18 ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000161185 #30 ENSGT00940000157793 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00390000008200.x ENSGT00940000164036 ENSGT00940000163903 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Marmotini ANCESTRAL SPECIES 23 ENSGT00940000163508 #34 ENSGT00940000164093 #33 ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793.f.a ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000164036 ENSGT00940000163903 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.fb #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Marmotini_b ANCESTRAL SPECIES 16 ENSGT00940000163469 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793.f.a ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000157793.e.a ENSGT00940000157793.f.b ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000164036 ENSGT00390000008200.w.a ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.fb #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Squirrel MODERN SPECIES 131 ZMAT2 (ENSSTOG00000002025) #23 HARS2 (ENSSTOG00000002016) #22 HARS1 (ENSSTOG00000002007) #21 DND1 (ENSSTOG00000002000) #20 WDR55 (ENSSTOG00000024223) #19 IK (ENSSTOG00000001980) #17 ENSSTOG00000022532 #18 TMCO6 (ENSSTOG00000028988) #16 CD14 (ENSSTOG00000001977) #14 SLC35A4 (ENSSTOG00000026149) #12 ENSSTOG00000032302 APBB3 (ENSSTOG00000001965) #11 SRA1 (ENSSTOG00000024229) #10 EIF4EBP3 (ENSSTOG00000020350) ANKHD1 (ENSSTOG00000001936) #9 SLC4A9 (ENSSTOG00000001919) #7 HBEGF (ENSSTOG00000028116) PFDN1 (ENSSTOG00000001913) Arctic ground squirrel MODERN SPECIES 29 ENSUPAG00010008088 #34 PCDHB16 (ENSUPAG00010008082) #33 PCDHB13 (ENSUPAG00010008078) PCDHB7 (ENSUPAG00010008073) ENSUPAG00010008071 #31 PCDHB6 (ENSUPAG00010008069) PCDHB4 (ENSUPAG00010008061) #30 ENSUPAG00010008056 ENSUPAG00010008052 PCDHB2 (ENSUPAG00010008039) PCDHB1 (ENSUPAG00010008038) #27 PCDHA10 (ENSUPAG00010008030) ENSUPAG00010008029 PCDHAC2 (ENSUPAG00010007747) #25 HARS2 (ENSUPAG00010007685) #22 HARS1 (ENSUPAG00010007659) #21 DND1 (ENSUPAG00010007650) #20 WDR55 (ENSUPAG00010007647) #19 IK (ENSUPAG00010007621) #17 ENSUPAG00010007617 #18 TMCO6 (ENSUPAG00010007603) #16 CD14 (ENSUPAG00010007599) #14 SLC35A4 (ENSUPAG00010007573) #12 ENSUPAG00010007570 APBB3 (ENSUPAG00010007552) #11 SRA1 (ENSUPAG00010007542) #10 EIF4EBP3 (ENSUPAG00010007533) ANKHD1 (ENSUPAG00010007490) #9 SLC4A9 (ENSUPAG00010007028) #7 HBEGF (ENSUPAG00010007010) PFDN1 (ENSUPAG00010007002) Alpin marmot MODERN SPECIES PCDHB7 (ENSMMMG00000011398) ENSMMMG00000011393 #31 ENSMMMG00000011371 PCDHB4 (ENSMMMG00000011353) #30 ENSMMMG00000011349 ENSMMMG00000011331 ENSMMMG00000011326 PCDHB3 (ENSMMMG00000011314) #29 PCDHB2 (ENSMMMG00000011310) PCDHB1 (ENSMMMG00000011303) #27 PCDHA10 (ENSMMMG00000011292) ENSMMMG00000011282 PCDHAC2 (ENSMMMG00000010851) #25 ZMAT2 (ENSMMMG00000010817) #23 HARS2 (ENSMMMG00000010764) #22 HARS1 (ENSMMMG00000010747) #21 DND1 (ENSMMMG00000010736) #20 WDR55 (ENSMMMG00000010722) #19 IK (ENSMMMG00000010705) #17 ENSMMMG00000010699 #18 TMCO6 (ENSMMMG00000010677) #16 CD14 (ENSMMMG00000010676) #14 SLC35A4 (ENSMMMG00000010659) #12 ENSMMMG00000010657 APBB3 (ENSMMMG00000010626) #11 EIF4EBP3 (ENSMMMG00000010610) ANKHD1 (ENSMMMG00000010548) #9 SLC4A9 (ENSMMMG00000010288) #7 HBEGF (ENSMMMG00000010280) PFDN1 (ENSMMMG00000010271) CYSTM1 (ENSMMMG00000010221) Eurasian red squirrel MODERN SPECIES 15 ENSSVLG00005019038 ENSSVLG00005019088 ENSSVLG00005019110 #30 ENSSVLG00005019194 PCDHB3 (ENSSVLG00005019267) #29 ENSSVLG00005019345 PCDHB1 (ENSSVLG00005019449) #27 ENSSVLG00005019568 PCDHAC2 (ENSSVLG00005019928) #25 ENSSVLG00005020598 ENSSVLG00005020614 ENSSVLG00005020630 ENSSVLG00005020676 ENSSVLG00005020736 #23 HARS2 (ENSSVLG00005020869) #22 HARS1 (ENSSVLG00005021378) #21 DND1 (ENSSVLG00005021541) #20 WDR55 (ENSSVLG00005021589) #19 IK (ENSSVLG00005021647) #17 ENSSVLG00005021813 #18 TMCO6 (ENSSVLG00005021859) #16 CD14 (ENSSVLG00005022015) #14 SLC35A4 (ENSSVLG00005022047) #12 ENSSVLG00005022063 APBB3 (ENSSVLG00005022127) #11 SRA1 (ENSSVLG00005022207) #10 EIF4EBP3 (ENSSVLG00005022238) ANKHD1 (ENSSVLG00005022311) #9 SLC4A9 (ENSSVLG00005022479) #7 HBEGF (ENSSVLG00005022906) PFDN1 (ENSSVLG00005022935) Lagomorpha ANCESTRAL SPECIES 3 ENSGT00940000160861 ENSGT00940000163424 #37 ENSGT00940000168418 #35 ENSGT00940000163508 #34 ENSGT00940000164093 #33 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT01090000260204 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00390000008200 ENSGT00940000163312 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Rabbit MODERN SPECIES 14 PCDHB16 (ENSOCUG00000039460) #33 PCDHB5 (ENSOCUG00000004558) PCDHB4 (ENSOCUG00000004555) #30 ENSOCUG00000033336 ENSOCUG00000004563 ENSOCUG00000038861 PCDHB1 (ENSOCUG00000007406) #27 ENSOCUG00000035800 ENSOCUG00000032864 ENSOCUG00000002575 ENSOCUG00000031387 PCDHAC2 (ENSOCUG00000008769) #25 ENSOCUG00000030751 ZMAT2 (ENSOCUG00000004255) #23 HARS2 (ENSOCUG00000004250) #22 HARS1 (ENSOCUG00000004243) #21 DND1 (ENSOCUG00000004240) #20 WDR55 (ENSOCUG00000026709) #19 IK (ENSOCUG00000004223) #17 NDUFA2 (ENSOCUG00000004237) #18 TMCO6 (ENSOCUG00000004236) #16 CD14 (ENSOCUG00000004218) #14 SLC35A4 (ENSOCUG00000009816) #12 ENSOCUG00000032814 APBB3 (ENSOCUG00000009817) #11 ENSOCUG00000021569 #10 EIF4EBP3 (ENSOCUG00000034094) ANKHD1 (ENSOCUG00000015943) #9 SLC4A9 (ENSOCUG00000015920) #7 HBEGF (ENSOCUG00000015909) PFDN1 (ENSOCUG00000009432) Tree shrew MODERN SPECIES 862 ENSTBEG00000007828 #23 HARS2 (ENSTBEG00000007467) #22 HARS1 (ENSTBEG00000006968) #21 DND1 (ENSTBEG00000006754) #20 WDR55 (ENSTBEG00000006347) #19 NDUFA2 (ENSTBEG00000005978) #18 ENSTBEG00000005500 #16 ANKHD1 (ENSTBEG00000003619) #9 SLC4A9 (ENSTBEG00000002352) #7 HBEGF (ENSTBEG00000001725) CYSTM1 (ENSTBEG00000001488) Primates ANCESTRAL SPECIES 8 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164036 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000163903 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Haplorrhini ANCESTRAL SPECIES 4 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164036 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000163903 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Simiiformes ANCESTRAL SPECIES 6 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164036 ENSGT00940000163312.i ENSGT00390000008200 ENSGT00940000163903 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT01010000226306 #13 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 Catarrhini ANCESTRAL SPECIES 7 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164036 ENSGT00940000163312.i ENSGT00390000008200 ENSGT00940000163903 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.bb.a #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT01010000226306 #13 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 Hominoidea ANCESTRAL SPECIES 8 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164036 ENSGT00940000163312.i ENSGT00940000163903.b ENSGT00940000163312.j ENSGT00940000163903.a ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225.g #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b.m #17 ENSGT00390000006178.cb ##18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00910000147452 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Hominidae ANCESTRAL SPECIES 7 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164036 ENSGT00940000163312.i ENSGT00940000163903.b ENSGT00940000163312.j ENSGT00940000163903.a ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225.g #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b.m #17 ENSGT00390000006178.cb ##18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00910000147452 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Homo/Pan/Gorilla group ANCESTRAL SPECIES 7 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164036 ENSGT00940000163312.i ENSGT00940000163903.b ENSGT00940000163312.j ENSGT00940000163903.a ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225.g #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b.m #17 ENSGT00390000006178.cb ##18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00910000147452 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Homo/Pan group ANCESTRAL SPECIES 8 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164036 ENSGT00940000163312.i ENSGT00940000163903.b ENSGT00940000163312.j ENSGT00940000163903.a ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225.g #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b.m #17 ENSGT00390000006178.cb ##18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00910000147452 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Pan ANCESTRAL SPECIES 10 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161193 #29 ENSGT00940000161185 #30 ENSGT00940000163333 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225.g #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b.m #17 ENSGT00390000006178.cb ##18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00910000147452 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00500000045016 Chimpanzee MODERN SPECIES 18 PCDHB10 (ENSPTRG00000032485) #34 PCDHB9 (ENSPTRG00000028558) ##34 PCDHB16 (ENSPTRG00000017338) #33 ENSPTRG00000049066 PCDHB17 (ENSPTRG00000032486) #31 PCDHB6 (ENSPTRG00000017335) PCDHB5 (ENSPTRG00000017334) ENSPTRG00000047767 PCDHB4 (ENSPTRG00000017333) #30 ENSPTRG00000049042 ENSPTRG00000046002 PCDHB1 (ENSPTRG00000017330) #27 PCDHA2 (ENSPTRG00000017328) #25 ZMAT2 (ENSPTRG00000017327) #23 HARS2 (ENSPTRG00000017326) #22 HARS1 (ENSPTRG00000017325) #21 DND1 (ENSPTRG00000017324) #20 WDR55 (ENSPTRG00000017323) #19 IK (ENSPTRG00000046901) #17 NDUFA2 (ENSPTRG00000017321) ##18 TMCO6 (ENSPTRG00000017320) #16 CD14 (ENSPTRG00000028584) #14 ENSPTRG00000049309 SLC35A4 (ENSPTRG00000017316) APBB3 (ENSPTRG00000033999) #11 SRA1 (ENSPTRG00000017314) #10 EIF4EBP3 (ENSPTRG00000047729) #9 SLC4A9 (ENSPTRG00000017312) #7 HBEGF (ENSPTRG00000017311) PFDN1 (ENSPTRG00000017310) CYSTM1 (ENSPTRG00000017309) Bonobo MODERN SPECIES 18 ENSPPAG00000038399 #31 PCDHB6 (ENSPPAG00000004197) PCDHB5 (ENSPPAG00000000875) PCDHB3 (ENSPPAG00000009539) #29 PCDHB2 (ENSPPAG00000035562) ENSPPAG00000034561 PCDHB1 (ENSPPAG00000008820) #27 PCDHA11 (ENSPPAG00000028775) PCDHAC2 (ENSPPAG00000024384) #25 PCDHA5 (ENSPPAG00000028190) PCDHA4 (ENSPPAG00000015078) #24 PCDHA3 (ENSPPAG00000021393) PCDHA1 (ENSPPAG00000030806) ZMAT2 (ENSPPAG00000034165) #23 HARS2 (ENSPPAG00000039406) #22 HARS1 (ENSPPAG00000039715) #21 DND1 (ENSPPAG00000031543) #20 WDR55 (ENSPPAG00000042662) #19 IK (ENSPPAG00000017619) #17 ENSPPAG00000029576 ##18 TMCO6 (ENSPPAG00000037562) #16 CD14 (ENSPPAG00000041409) #14 ENSPPAG00000040115 ENSPPAG00000036511 APBB3 (ENSPPAG00000039248) #11 SRA1 (ENSPPAG00000032469) #10 ANKHD1 (ENSPPAG00000006129) #9 SLC4A9 (ENSPPAG00000005338) #7 HBEGF (ENSPPAG00000039648) PFDN1 (ENSPPAG00000029009) CYSTM1 (ENSPPAG00000031723) Human MODERN SPECIES 17 PCDHA13 (ENSG00000239389) PCDHA12 (ENSG00000251664) PCDHA11 (ENSG00000249158) PCDHA10 (ENSG00000250120) PCDHA9 (ENSG00000204961) PCDHA8 (ENSG00000204962) PCDHA7 (ENSG00000204963) PCDHA6 (ENSG00000081842) PCDHA5 (ENSG00000204965) PCDHA4 (ENSG00000204967) #24 PCDHA3 (ENSG00000255408) PCDHA2 (ENSG00000204969) PCDHA1 (ENSG00000204970) ZMAT2 (ENSG00000146007) #23 HARS2 (ENSG00000112855) #22 HARS1 (ENSG00000170445) #21 DND1 (ENSG00000256453) #20 WDR55 (ENSG00000120314) #19 IK (ENSG00000113141) #17 TMCO6 (ENSG00000113119) #16 NDUFA2 (ENSG00000131495) #18 CD14 (ENSG00000170458) #14 SLC35A4 (ENSG00000176087) #12 APBB3 (ENSG00000113108) #11 EIF4EBP3 (ENSG00000243056) SRA1 (ENSG00000213523) #10 ANKHD1-EIF4EBP3 (ENSG00000254996) ANKHD1 (ENSG00000131503) #9 SLC4A9 (ENSG00000113073) #7 HBEGF (ENSG00000113070) PFDN1 (ENSG00000113068) Gorilla DUPLICATION Gorilla MODERN SPECIES 18 PCDHB7 (ENSGGOG00000041339) ENSGGOG00000036986 #31 PCDHB6 (ENSGGOG00000034817) PCDHB5 (ENSGGOG00000008995) PCDHB4 (ENSGGOG00000013194) #30 PCDHB3 (ENSGGOG00000008302) #29 ENSGGOG00000042273 ENSGGOG00000008247 ENSGGOG00000007051 PCDHAC2 (ENSGGOG00000000665) #25 ZMAT2 (ENSGGOG00000005121) #23 ENSGGOG00000041947 #22 HARS2 (ENSGGOG00000013177) #22 ENSGGOG00000044128 #20 ENSGGOG00000025477 #21 ENSGGOG00000013169 #21 ENSGGOG00000042535 #20 WDR55 (ENSGGOG00000013388) #19 IK (ENSGGOG00000013374) #17 ENSGGOG00000013369 ##18 TMCO6 (ENSGGOG00000013364) #16 CD14 (ENSGGOG00000010370) #14 ENSGGOG00000037182 ENSGGOG00000004098 APBB3 (ENSGGOG00000015880) #11 SRA1 (ENSGGOG00000042935) #10 ANKHD1 (ENSGGOG00000000288) #9 SLC4A9 (ENSGGOG00000000287) #7 HBEGF (ENSGGOG00000000286) PFDN1 (ENSGGOG00000022554) IGIP (ENSGGOG00000040159) Gorilla MODERN SPECIES 18 PFDN1 (ENSGGOG00000022554) HBEGF (ENSGGOG00000000286) SLC4A9 (ENSGGOG00000000287) #7 ANKHD1 (ENSGGOG00000000288) #9 SRA1 (ENSGGOG00000042935) #10 APBB3 (ENSGGOG00000015880) #11 ENSGGOG00000004098 ENSGGOG00000037182 CD14 (ENSGGOG00000010370) #14 TMCO6 (ENSGGOG00000013364) #16 ENSGGOG00000013369 ##18 IK (ENSGGOG00000013374) #17 WDR55 (ENSGGOG00000013388) #19 ENSGGOG00000042535 #20 ENSGGOG00000013169 #21 ENSGGOG00000025477 #21 ENSGGOG00000044128 #20 HARS2 (ENSGGOG00000013177) #22 ENSGGOG00000041947 #22 ZMAT2 (ENSGGOG00000005121) #23 PCDHAC2 (ENSGGOG00000000665) #25 ENSGGOG00000007051 ENSGGOG00000008247 ENSGGOG00000042273 PCDHB3 (ENSGGOG00000008302) #29 PCDHB4 (ENSGGOG00000013194) #30 PCDHB5 (ENSGGOG00000008995) PCDHB6 (ENSGGOG00000034817) ENSGGOG00000036986 #31 PCDHB7 (ENSGGOG00000041339) ENSGGOG00000040231 Orangutan MODERN SPECIES 18 ENSPPYG00000037312 PCDHB10 (ENSPPYG00000034983) #34 PCDHB9 (ENSPPYG00000032781) ##34 PCDHB8 (ENSPPYG00000015878) #32 PCDHB7 (ENSPPYG00000036784) ENSPPYG00000033454 #31 PCDHB5 (ENSPPYG00000015877) PCDHB4 (ENSPPYG00000015876) #30 PCDHB3 (ENSPPYG00000030794) #29 ENSPPYG00000041606 #28 PCDHB1 (ENSPPYG00000015874) #27 ENSPPYG00000030326 PCDHAC2 (ENSPPYG00000015871) #25 ZMAT2 (ENSPPYG00000015866) #23 HARS2 (ENSPPYG00000015865) #22 HARS1 (ENSPPYG00000015864) #21 DND1 (ENSPPYG00000015863) #20 WDR55 (ENSPPYG00000015862) #19 IK (ENSPPYG00000015861) #17 NDUFA2 (ENSPPYG00000036662) ##18 TMCO6 (ENSPPYG00000015859) #16 CD14 (ENSPPYG00000015858) #14 SLC35A4 (ENSPPYG00000015857) #12 APBB3 (ENSPPYG00000015856) #11 SRA1 (ENSPPYG00000015855) #10 EIF4EBP3 (ENSPPYG00000041086) ANKHD1 (ENSPPYG00000015854) #9 SLC4A9 (ENSPPYG00000015853) #7 HBEGF (ENSPPYG00000015852) PFDN1 (ENSPPYG00000030565) CYSTM1 (ENSPPYG00000015850) Gibbon MODERN SPECIES 11 PCDHB14 (ENSNLEG00000035733) #36 PCDHB13 (ENSNLEG00000018472) ENSNLEG00000028941 PCDHB10 (ENSNLEG00000027263) #34 ENSNLEG00000009502 ##34 ENSNLEG00000033041 ENSNLEG00000028488 #32 ENSNLEG00000009493 #31 PCDHB5 (ENSNLEG00000009491) PCDHB4 (ENSNLEG00000029366) #30 PCDHB3 (ENSNLEG00000027630) #29 PCDHAC2 (ENSNLEG00000018464) #25 ENSNLEG00000009485 ENSNLEG00000009450 #23 HARS2 (ENSNLEG00000009427) #22 HARS1 (ENSNLEG00000009389) #21 DND1 (ENSNLEG00000034318) #20 WDR55 (ENSNLEG00000033658) #19 IK (ENSNLEG00000009329) #17 ENSNLEG00000009325 ##18 TMCO6 (ENSNLEG00000009308) #16 CD14 (ENSNLEG00000009307) #14 ENSNLEG00000034768 ENSNLEG00000009304 ENSNLEG00000032877 ENSNLEG00000009275 #11 SRA1 (ENSNLEG00000034424) #10 ANKHD1 (ENSNLEG00000009235) #9 SLC4A9 (ENSNLEG00000009225) #7 HBEGF (ENSNLEG00000009220) PFDN1 (ENSNLEG00000009218) Cercopithecidae ANCESTRAL SPECIES 5 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00900000143298 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000164036 ENSGT00940000163903 ENSGT00940000164408 ENSGT00940000163312.i ENSGT00390000008200 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.bb.a #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT01010000226306 #13 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 Cercopithecinae ANCESTRAL SPECIES 9 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00900000143298 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000164036 ENSGT00940000163903 ENSGT00940000164408 ENSGT00940000163312.i ENSGT00390000008200 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.bb.a #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F.c #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Cercopithecinae_a ANCESTRAL SPECIES 9 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00900000143298 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000164036 ENSGT00940000163903 ENSGT00940000164408 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.bb.a #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F.c #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Cercopithecinae_b ANCESTRAL SPECIES 4 ENSGT00940000165899 #32 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00900000143298 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000164036 ENSGT00940000163903 ENSGT00940000164408 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.bb.a #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F.c #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00500000045016 Olive baboon MODERN SPECIES 15 TAF7 (ENSPANG00000000647) SLC25A2 (ENSPANG00000000311) #37 PCDHB15 (ENSPANG00000003559) PCDHB14 (ENSPANG00000019433) #36 ENSPANG00000034312 #35 PCDHB7 (ENSPANG00000033865) ENSPANG00000034248 #31 PCDHB6 (ENSPANG00000023782) PCDHB5 (ENSPANG00000014179) PCDHB4 (ENSPANG00000045109) #30 ENSPANG00000049344 ENSPANG00000050229 #28 PCDHAC2 (ENSPANG00000009513) #25 ZMAT2 (ENSPANG00000032021) #23 HARS2 (ENSPANG00000011662) #22 HARS1 (ENSPANG00000011928) #21 DND1 (ENSPANG00000007892) #20 WDR55 (ENSPANG00000015777) #19 IK (ENSPANG00000019171) #17 NDUFA2 (ENSPANG00000035408) #18 TMCO6 (ENSPANG00000003022) #16 CD14 (ENSPANG00000011929) #14 SLC35A4 (ENSPANG00000024663) #12 ENSPANG00000031921 APBB3 (ENSPANG00000006033) #11 SRA1 (ENSPANG00000008615) #10 ANKHD1 (ENSPANG00000000200) #9 SLC4A9 (ENSPANG00000002472) #7 HBEGF (ENSPANG00000011663) ENSPANG00000038370 PFDN1 (ENSPANG00000016007) Cercopithecinae_d ANCESTRAL SPECIES 18 ENSGT00940000165899 #32 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00900000143298 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000164036 ENSGT00940000163903 ENSGT00940000164408 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.bb.a #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00910000147452 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00500000045016 Sooty mangabey MODERN SPECIES 309 DIAPH1 (ENSCATG00000035236) ENSCATG00000020733 PCDHGA4 (ENSCATG00000043500) PCDHB14 (ENSCATG00000002956) #36 ENSCATG00000031584 #35 ENSCATG00000041883 #31 PCDHB5 (ENSCATG00000021394) PCDHB4 (ENSCATG00000041627) #30 PCDHB3 (ENSCATG00000004125) #29 ENSCATG00000005931 ENSCATG00000020787 PCDHB1 (ENSCATG00000021671) #27 PCDHAC2 (ENSCATG00000039230) #25 ZMAT2 (ENSCATG00000032843) #23 HARS2 (ENSCATG00000034017) #22 HARS1 (ENSCATG00000036942) #21 DND1 (ENSCATG00000025088) #20 WDR55 (ENSCATG00000034527) #19 IK (ENSCATG00000044094) #17 NDUFA2 (ENSCATG00000036702) #18 TMCO6 (ENSCATG00000032823) #16 CD14 (ENSCATG00000030860) #14 ENSCATG00000034680 ENSCATG00000031674 APBB3 (ENSCATG00000032944) #11 SRA1 (ENSCATG00000044295) #10 ANKHD1 (ENSCATG00000029425) #9 SLC4A9 (ENSCATG00000022107) #7 HBEGF (ENSCATG00000044743) PFDN1 (ENSCATG00000018995) CYSTM1 (ENSCATG00000044800) Drill MODERN SPECIES 1446 PCDHB8 (ENSMLEG00000017381) #32 ENSMLEG00000042263 #31 PCDHB6 (ENSMLEG00000033049) PCDHB5 (ENSMLEG00000031142) PCDHB4 (ENSMLEG00000019793) #30 PCDHB3 (ENSMLEG00000027275) #29 ENSMLEG00000027337 ENSMLEG00000012923 PCDHB1 (ENSMLEG00000000950) #27 PCDHA10 (ENSMLEG00000044362) ENSMLEG00000044351 PCDHA5 (ENSMLEG00000023182) PCDHAC2 (ENSMLEG00000001069) #25 ZMAT2 (ENSMLEG00000041320) #23 HARS2 (ENSMLEG00000014240) #22 HARS1 (ENSMLEG00000016289) #21 DND1 (ENSMLEG00000044049) #20 WDR55 (ENSMLEG00000035918) #19 IK (ENSMLEG00000018434) #17 NDUFA2 (ENSMLEG00000043870) #18 TMCO6 (ENSMLEG00000043597) #16 CD14 (ENSMLEG00000040468) #14 ENSMLEG00000042111 APBB3 (ENSMLEG00000017053) #11 SRA1 (ENSMLEG00000036807) #10 ANKHD1 (ENSMLEG00000029310) #9 SLC4A9 (ENSMLEG00000000295) #7 HBEGF (ENSMLEG00000040667) PFDN1 (ENSMLEG00000042368) Macaca ANCESTRAL SPECIES 7 ENSGT00940000163508.c #34 ENSGT00940000164093 #33 ENSGT00940000165899 #32 ENSGT00940000163469 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000163903 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.bb.a #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F.c #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Pig-tailed macaque MODERN SPECIES 383 PCDHGA4 (ENSMNEG00000029363) PCDHGA10 (ENSMNEG00000031767) ENSMNEG00000026891 PCDHB14 (ENSMNEG00000026635) #36 ENSMNEG00000040142 #35 PCDHB10 (ENSMNEG00000023270) #34 ENSMNEG00000032300 #31 PCDHB4 (ENSMNEG00000036578) #30 ENSMNEG00000026473 ENSMNEG00000025056 PCDHB1 (ENSMNEG00000003349) #27 PCDHAC2 (ENSMNEG00000039616) #25 PCDHA8 (ENSMNEG00000008879) ZMAT2 (ENSMNEG00000031600) #23 HARS2 (ENSMNEG00000040270) #22 HARS1 (ENSMNEG00000020918) #21 DND1 (ENSMNEG00000038956) #20 WDR55 (ENSMNEG00000042797) #19 IK (ENSMNEG00000020155) #17 NDUFA2 (ENSMNEG00000033708) #18 TMCO6 (ENSMNEG00000037241) #16 CD14 (ENSMNEG00000031928) #14 ENSMNEG00000040012 ENSMNEG00000040672 APBB3 (ENSMNEG00000029415) #11 SRA1 (ENSMNEG00000029401) #10 ANKHD1 (ENSMNEG00000030029) #9 SLC4A9 (ENSMNEG00000044652) #7 HBEGF (ENSMNEG00000029451) PFDN1 (ENSMNEG00000038519) CYSTM1 (ENSMNEG00000045095) Macaca_a ANCESTRAL SPECIES 8 ENSGT00940000168418 #35 ENSGT00940000163508.c #34 ENSGT00940000164093 #33 ENSGT00940000165899 #32 ENSGT00940000163469 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.bb.a #18 ENSGT00390000008104 #16 ENSGT01100000263493.b.a.a.a.b.b #15 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F.c #12 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000164709.a.b.b.a.b.a.a.b #8 ENSGT00940000160970 #7 ENSGT00940000156901.A Rhesus MODERN SPECIES 16 ENSMMUG00000053051 PCDHB13 (ENSMMUG00000049686) PCDHB10 (ENSMMUG00000061532) #34 PCDHB8 (ENSMMUG00000051748) #32 PCDHB7 (ENSMMUG00000050553) ENSMMUG00000029809 #31 PCDHB6 (ENSMMUG00000062723) PCDHB5 (ENSMMUG00000057673) PCDHB4 (ENSMMUG00000019523) #30 PCDHB3 (ENSMMUG00000062270) #29 PCDHB2 (ENSMMUG00000061483) PCDHB1 (ENSMMUG00000014574) #27 PCDHAC2 (ENSMMUG00000014571) #25 ZMAT2 (ENSMMUG00000004484) #23 HARS2 (ENSMMUG00000004483) #22 HARS1 (ENSMMUG00000004481) #21 DND1 (ENSMMUG00000052950) #20 WDR55 (ENSMMUG00000058653) #19 IK (ENSMMUG00000010008) #17 NDUFA2 (ENSMMUG00000056796) #18 TMCO6 (ENSMMUG00000018246) #16 ENSMMUG00000060632 #15 CD14 (ENSMMUG00000010007) #14 ENSMMUG00000062326 SLC35A4 (ENSMMUG00000001725) #12 APBB3 (ENSMMUG00000001707) #11 EIF4EBP3 (ENSMMUG00000019582) #9 ENSMMUG00000063513 #8 SLC4A9 (ENSMMUG00000003723) #7 HBEGF (ENSMMUG00000060742) CYSTM1 (ENSMMUG00000059630) Crab-eating macaque MODERN SPECIES 16 PCDHB14 (ENSMFAG00000005051) #36 ENSMFAG00000051593 #35 PCDHB10 (ENSMFAG00000055499) #34 PCDHB16 (ENSMFAG00000026752) #33 PCDHB8 (ENSMFAG00000052129) #32 ENSMFAG00000047273 #31 PCDHB4 (ENSMFAG00000003385) #30 PCDHB3 (ENSMFAG00000003623) #29 ENSMFAG00000051210 #28 PCDHB1 (ENSMFAG00000021230) #27 ENSMFAG00000061386 #26 PCDHAC2 (ENSMFAG00000043753) #25 PCDHA4 (ENSMFAG00000054472) #24 ZMAT2 (ENSMFAG00000037329) #23 HARS2 (ENSMFAG00000003090) #22 HARS1 (ENSMFAG00000002630) #21 DND1 (ENSMFAG00000003284) #20 WDR55 (ENSMFAG00000001095) #19 NDUFA2 (ENSMFAG00000049634) #18 IK (ENSMFAG00000040961) #17 TMCO6 (ENSMFAG00000034339) #16 ENSMFAG00000058253 #15 CD14 (ENSMFAG00000025943) #14 ENSMFAG00000058854 #13 SLC35A4 (ENSMFAG00000041351) #12 APBB3 (ENSMFAG00000001205) #11 SRA1 (ENSMFAG00000007347) #10 ANKHD1 (ENSMFAG00000041567) #9 ENSMFAG00000061909 #8 SLC4A9 (ENSMFAG00000033873) #7 HBEGF (ENSMFAG00000043747) Vervet Monkey MODERN SPECIES 15 PCDHB12 (ENSCSAG00000012510) PCDHB8 (ENSCSAG00000012515) #32 PCDHB7 (ENSCSAG00000012530) PCDHB6 (ENSCSAG00000000487) PCDHB5 (ENSCSAG00000000488) PCDHB4 (ENSCSAG00000000489) #30 PCDHB3 (ENSCSAG00000000490) #29 PCDHB2 (ENSCSAG00000000491) PCDHB1 (ENSCSAG00000000492) #27 PCDHAC2 (ENSCSAG00000012587) #25 PCDHA9 (ENSCSAG00000012611) ENSCSAG00000012618 PCDHA1 (ENSCSAG00000012633) ZMAT2 (ENSCSAG00000012639) #23 HARS2 (ENSCSAG00000012655) #22 HARS1 (ENSCSAG00000012664) #21 DND1 (ENSCSAG00000012677) #20 WDR55 (ENSCSAG00000012681) #19 IK (ENSCSAG00000012695) #17 NDUFA2 (ENSCSAG00000012711) #18 TMCO6 (ENSCSAG00000012735) #16 CD14 (ENSCSAG00000012743) #14 SLC35A4 (ENSCSAG00000000493) #12 APBB3 (ENSCSAG00000012804) #11 SRA1 (ENSCSAG00000012824) #10 EIF4EBP3 (ENSCSAG00000012830) ANKHD1 (ENSCSAG00000012854) #9 SLC4A9 (ENSCSAG00000012893) #7 HBEGF (ENSCSAG00000012908) PFDN1 (ENSCSAG00000012913) CYSTM1 (ENSCSAG00000012920) Rhinopithecus ANCESTRAL SPECIES 17 ENSGT00940000163786 #31 ENSGT00940000164011 ENSGT00940000163201.a.a ENSGT00940000163201.a.b ENSGT00940000163508.c #34 ENSGT00940000164093 #33 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00900000143298 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000163903 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a.e #19 ENSGT00940000153727.a.f #19 ENSGT00940000153727.b #17 ENSGT00390000006178.bb.a #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT01010000226306 #13 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Golden snub-nosed monkey MODERN SPECIES 2661 DIAPH1 (ENSRROG00000036504) PCDHGB3 (ENSRROG00000041977) PCDHGA4 (ENSRROG00000031416) ENSRROG00000016468 PCDHB15 (ENSRROG00000026845) PCDHB14 (ENSRROG00000003674) #36 ENSRROG00000041778 ENSRROG00000038377 #31 PCDHB5 (ENSRROG00000022029) PCDHB4 (ENSRROG00000038919) #30 ENSRROG00000006327 PCDHA8 (ENSRROG00000029015) PCDHAC2 (ENSRROG00000043490) #25 ZMAT2 (ENSRROG00000032700) #23 HARS2 (ENSRROG00000036375) #22 HARS1 (ENSRROG00000033541) #21 DND1 (ENSRROG00000039329) #20 ENSRROG00000041702 #19 IK (ENSRROG00000030823) #17 ENSRROG00000044049 #18 TMCO6 (ENSRROG00000035531) #16 CD14 (ENSRROG00000038241) #14 ENSRROG00000035897 APBB3 (ENSRROG00000036652) #11 SRA1 (ENSRROG00000011630) #10 ENSRROG00000004069 ANKHD1 (ENSRROG00000039204) #9 SLC4A9 (ENSRROG00000034854) #7 HBEGF (ENSRROG00000030102) PFDN1 (ENSRROG00000040145) CYSTM1 (ENSRROG00000036603) Black snub-nosed monkey MODERN SPECIES 1063 ZMAT2 (ENSRBIG00000031072) #23 HARS2 (ENSRBIG00000036529) #22 HARS1 (ENSRBIG00000028934) #21 DND1 (ENSRBIG00000036511) #20 ENSRBIG00000038113 #19 WDR55 (ENSRBIG00000043936) #19 IK (ENSRBIG00000041959) #17 NDUFA2 (ENSRBIG00000032428) ##18 ENSRBIG00000025534 ENSRBIG00000034615 FAM186A (ENSRBIG00000031479) ENSRBIG00000038857 DIP2B (ENSRBIG00000003322) ATF1 (ENSRBIG00000030964) TMPRSS12 (ENSRBIG00000033759) METTL7A (ENSRBIG00000039865) Platyrrhini ANCESTRAL SPECIES 7 ENSGT00940000164011 ENSGT00940000163201.b ENSGT00940000163508.d ##34 ENSGT00940000164093 #33 ENSGT00940000165899 #32 ENSGT00940000163469 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00960000186917 ENSGT00940000160554 #25 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.ab #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000006029.b ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT01010000226306 #13 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 Mas night monkey MODERN SPECIES 966 PCDHB14 (ENSANAG00000028449) #36 PCDHB12 (ENSANAG00000027384) PCDHB10 (ENSANAG00000037153) #34 ENSANAG00000028914 PCDHB16 (ENSANAG00000029635) #33 PCDHB7 (ENSANAG00000028196) ENSANAG00000023913 #31 PCDHB4 (ENSANAG00000032867) #30 PCDHB3 (ENSANAG00000029348) #29 ENSANAG00000024712 PCDHAC2 (ENSANAG00000033673) #25 ENSANAG00000026457 ENSANAG00000028755 ZMAT2 (ENSANAG00000028921) #23 HARS2 (ENSANAG00000028635) #22 HARS1 (ENSANAG00000034093) #21 ENSANAG00000037212 #20 WDR55 (ENSANAG00000029439) #19 IK (ENSANAG00000037081) #17 ENSANAG00000036345 #18 TMCO6 (ENSANAG00000034193) #16 CD14 (ENSANAG00000034732) #14 ENSANAG00000034215 ENSANAG00000036424 SLC35A4 (ENSANAG00000016426) #12 ENSANAG00000033588 APBB3 (ENSANAG00000034312) #11 SRA1 (ENSANAG00000020391) #10 ANKHD1 (ENSANAG00000035164) #9 ENSANAG00000035559 ENSANAG00000037215 Cebidae ANCESTRAL SPECIES 6 ENSGT00940000163201.b ENSGT00940000163508.d ##34 ENSGT00940000164093 #33 ENSGT00940000165899 #32 ENSGT00940000163469 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00960000186917 ENSGT00910000147044 ENSGT00940000160554 #25 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.ab #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000006029.b ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT01010000226306 #13 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 Marmoset MODERN SPECIES 11 ENSCJAG00000082423 #33 PCDHB8 (ENSCJAG00000072174) #32 PCDHB7 (ENSCJAG00000077866) ENSCJAG00000080951 #31 PCDHB6 (ENSCJAG00000039993) PCDHB5 (ENSCJAG00000046665) PCDHB4 (ENSCJAG00000082856) #30 PCDHB3 (ENSCJAG00000084247) #29 ENSCJAG00000043731 #28 ENSCJAG00000077557 ENSCJAG00000072316 PCDHA9 (ENSCJAG00000016159) ENSCJAG00000075741 ENSCJAG00000016231 #23 HARS2 (ENSCJAG00000016237) #22 HARS1 (ENSCJAG00000016282) #21 DND1 (ENSCJAG00000016345) #20 WDR55 (ENSCJAG00000016359) #19 ENSCJAG00000087247 IK (ENSCJAG00000016366) #17 TMCO6 (ENSCJAG00000016529) #16 CD14 (ENSCJAG00000052964) #14 ENSCJAG00000076026 ##15 SLC35A4 (ENSCJAG00000038978) #12 ENSCJAG00000074508 APBB3 (ENSCJAG00000016553) #11 ENSCJAG00000016613 #10 EIF4EBP3 (ENSCJAG00000041408) ANKHD1 (ENSCJAG00000016624) #9 SLC4A9 (ENSCJAG00000016762) #7 HBEGF (ENSCJAG00000016803) Cebidae_a ANCESTRAL SPECIES 3 ENSGT00940000163362 #36 ENSGT00940000164011 ENSGT00940000163201.b ENSGT00940000163508.d ##34 ENSGT00910000147119 ENSGT00940000165899 #32 ENSGT00940000163469 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00960000186917 ENSGT00910000147044 ENSGT00940000160554 #25 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.ab #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000006029.b ENSGT00390000007844 ENSGT01010000226306 #13 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786.jb.b Capuchin MODERN SPECIES 101 ENSCCAG00000031812 RAPH1 (ENSCCAG00000029188) ABI2 (ENSCCAG00000027705) CYP20A1 (ENSCCAG00000036341) ENSCCAG00000031449 NBEAL1 (ENSCCAG00000021158) CARF (ENSCCAG00000019881) WDR12 (ENSCCAG00000005461) ICA1L (ENSCCAG00000027883) FAM117B (ENSCCAG00000031732) ENSCCAG00000026090 BMPR2 (ENSCCAG00000025039) ENSCCAG00000029316 NOP58 (ENSCCAG00000021573) ENSCCAG00000036402 HARS1 (ENSCCAG00000024213) #21 DND1 (ENSCCAG00000020065) #20 WDR55 (ENSCCAG00000032739) #19 ENSCCAG00000027098 IK (ENSCCAG00000022729) #17 ENSCCAG00000036213 #18 TMCO6 (ENSCCAG00000019619) #16 CD14 (ENSCCAG00000022555) #14 ENSCCAG00000020715 ENSCCAG00000030910 APBB3 (ENSCCAG00000038002) #11 SRA1 (ENSCCAG00000029225) #10 ANKHD1 (ENSCCAG00000036565) #9 SLC4A9 (ENSCCAG00000030814) #7 HBEGF (ENSCCAG00000033786) ENSCCAG00000033578 Bolivian squirrel monkey MODERN SPECIES 103 ZMAT2 (ENSSBOG00000025911) #23 HARS2 (ENSSBOG00000032350) #22 HARS1 (ENSSBOG00000020268) #21 DND1 (ENSSBOG00000027247) #20 WDR55 (ENSSBOG00000020822) #19 IK (ENSSBOG00000026357) #17 NDUFA2 (ENSSBOG00000021588) #18 TMCO6 (ENSSBOG00000029470) #16 CD14 (ENSSBOG00000034070) #14 ENSSBOG00000032306 ENSSBOG00000029254 ENSSBOG00000033106 #13 APBB3 (ENSSBOG00000024294) #11 SRA1 (ENSSBOG00000011756) #10 ANKHD1 (ENSSBOG00000027605) #9 SLC4A9 (ENSSBOG00000030693) #7 HBEGF (ENSSBOG00000030515) PFDN1 (ENSSBOG00000034909) Tarsier MODERN SPECIES 7283 ENSTSYG00000005760 PCDHA5 (ENSTSYG00000007083) PCDHA4 (ENSTSYG00000014492) #24 PCDHA3 (ENSTSYG00000004842) PCDHA2 (ENSTSYG00000004840) ZMAT2 (ENSTSYG00000035442) #23 HARS2 (ENSTSYG00000001833) #22 HARS (ENSTSYG00000001804) #21 DND1 (ENSTSYG00000026365) #20 WDR55 (ENSTSYG00000033042) #19 IK (ENSTSYG00000001304) #17 NDUFA2 (ENSTSYG00000008340) #18 TMCO6 (ENSTSYG00000034411) #16 CD14 (ENSTSYG00000000598) #14 Strepsirrhini ANCESTRAL SPECIES 5 ENSGT00940000163362 #36 ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163433 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000164036 ENSGT00940000163903 ENSGT00940000163312 ENSGT00390000008200 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Lemuriformes ANCESTRAL SPECIES 21 ENSGT00940000163508 #34 ENSGT00940000164093 #33 ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163433 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00960000186917 ENSGT00940000160554 #25 ENSGT00940000164036 ENSGT00940000163903 ENSGT00940000163312 ENSGT00390000008200 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Mouse lemur MODERN SPECIES 10 RELL2 (ENSMICG00000017450) HDAC3 (ENSMICG00000017449) DIAPH1 (ENSMICG00000011482) PCDHGA9 (ENSMICG00000047125) PCDHGA4 (ENSMICG00000011479) PCDHB14 (ENSMICG00000035051) #36 ENSMICG00000039388 #34 PCDHB4 (ENSMICG00000042585) #30 PCDHB3 (ENSMICG00000016131) #29 PCDHA12 (ENSMICG00000030528) ENSMICG00000046655 ENSMICG00000029317 PCDHAC2 (ENSMICG00000034226) #25 ZMAT2 (ENSMICG00000042843) #23 HARS2 (ENSMICG00000014100) #22 HARS1 (ENSMICG00000014087) #21 DND1 (ENSMICG00000029187) #20 WDR55 (ENSMICG00000045324) #19 IK (ENSMICG00000014045) #17 NDUFA2 (ENSMICG00000047730) #18 TMCO6 (ENSMICG00000014064) #16 CD14 (ENSMICG00000037582) #14 ENSMICG00000036280 APBB3 (ENSMICG00000000372) #11 SRA1 (ENSMICG00000044059) #10 ANKHD1 (ENSMICG00000000358) #9 SLC4A9 (ENSMICG00000000352) #7 HBEGF (ENSMICG00000047446) PFDN1 (ENSMICG00000043564) CYSTM1 (ENSMICG00000047794) IGIP (ENSMICG00000014785) Lemuriformes_a ANCESTRAL SPECIES 13 ENSGT00940000163508 #34 ENSGT00940000164093 #33 ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163433 ENSGT00940000161185 #30 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00960000186917 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000163312 ENSGT00390000008200 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Coquerels sifaka MODERN SPECIES 852 PCDHA13 (ENSPCOG00000024610) ENSPCOG00000010236 #24 PCDHA2 (ENSPCOG00000021548) ZMAT2 (ENSPCOG00000020829) #23 HARS2 (ENSPCOG00000022041) #22 HARS1 (ENSPCOG00000027592) #21 DND1 (ENSPCOG00000022204) #20 WDR55 (ENSPCOG00000022432) #19 IK (ENSPCOG00000017840) #17 ENSPCOG00000028037 #18 TMCO6 (ENSPCOG00000014352) #16 CD14 (ENSPCOG00000022838) #14 ENSPCOG00000027426 APBB3 (ENSPCOG00000015470) #11 SRA1 (ENSPCOG00000010221) #10 EIF4EBP3 (ENSPCOG00000014289) ANKHD1 (ENSPCOG00000028558) #9 Greater bamboo lemur MODERN SPECIES 284 PCDHB14 (ENSPSMG00000020835) #36 ENSPSMG00000020822 ENSPSMG00000020816 #34 PCDHB16 (ENSPSMG00000020800) #33 PCDHB13 (ENSPSMG00000020791) PCDHB7 (ENSPSMG00000020786) PCDHB3 (ENSPSMG00000020781) #29 PCDHB4 (ENSPSMG00000020775) #30 PCDHB2 (ENSPSMG00000020767) PCDHB1 (ENSPSMG00000020756) #27 ENSPSMG00000020749 PCDHAC1 (ENSPSMG00000020744) ENSPSMG00000020702 ZMAT2 (ENSPSMG00000020699) #23 HARS2 (ENSPSMG00000020485) #22 HARS1 (ENSPSMG00000020199) #21 DND1 (ENSPSMG00000020048) #20 WDR55 (ENSPSMG00000020043) #19 IK (ENSPSMG00000020005) #17 NDUFA2 (ENSPSMG00000019873) #18 TMCO6 (ENSPSMG00000019851) #16 CD14 (ENSPSMG00000019788) #14 SLC35A4 (ENSPSMG00000019766) #12 ENSPSMG00000019763 APBB3 (ENSPSMG00000019682) #11 SRA1 (ENSPSMG00000019602) #10 ANKHD1 (ENSPSMG00000019505) #9 SLC4A9 (ENSPSMG00000019289) #7 HBEGF (ENSPSMG00000019274) PFDN1 (ENSPSMG00000019270) ENSPSMG00000019259 Bushbaby MODERN SPECIES 118 ENSOGAG00000011389 PCDHB15 (ENSOGAG00000027699) ENSOGAG00000011382 #34 PCDHB14 (ENSOGAG00000011385) #36 PCDHB13 (ENSOGAG00000011387) PCDHB5 (ENSOGAG00000011372) PCDHB1 (ENSOGAG00000005468) #27 PCDHAC2 (ENSOGAG00000034904) #25 PCDHA12 (ENSOGAG00000032591) PCDHA10 (ENSOGAG00000030636) ENSOGAG00000024809 ENSOGAG00000031601 PCDHA2 (ENSOGAG00000029087) ZMAT2 (ENSOGAG00000002054) #23 HARS2 (ENSOGAG00000002052) #22 HARS1 (ENSOGAG00000002050) #21 DND1 (ENSOGAG00000033318) #20 WDR55 (ENSOGAG00000033796) #19 IK (ENSOGAG00000014281) #17 NDUFA2 (ENSOGAG00000027727) #18 TMCO6 (ENSOGAG00000014285) #16 CD14 (ENSOGAG00000014280) #14 SLC35A4 (ENSOGAG00000032808) #12 APBB3 (ENSOGAG00000014274) #11 SRA1 (ENSOGAG00000025549) #10 ANKHD1 (ENSOGAG00000014263) #9 SLC4A9 (ENSOGAG00000003589) #7 HBEGF (ENSOGAG00000003377) ENSOGAG00000003376 CYSTM1 (ENSOGAG00000003374) IGIP (ENSOGAG00000003373) Laurasiatheria ANCESTRAL SPECIES 8 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000164882 ENSGT00940000164036 ENSGT00940000163903 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Laurasiatheria_a ANCESTRAL SPECIES 9 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000164036 ENSGT00940000163903 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Artiodactyla ANCESTRAL SPECIES 8 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164036 ENSGT00940000164882 ENSGT00940000163903 ENSGT00390000008200 ENSGT00940000163312 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Suina ANCESTRAL SPECIES 11 ENSGT00940000163362 #36 ENSGT01090000260204.a.a.b ENSGT00940000161193 #29 ENSGT00900000143298 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165479 ENSGT00940000164882 ENSGT00940000163312 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00390000008200 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Chacoan peccary MODERN SPECIES 913 ENSCWAG00000011289 PCDHB3 (ENSCWAG00000011256) #29 ENSCWAG00000011235 ENSCWAG00000011205 PCDHB1 (ENSCWAG00000011189) #27 PCDHAC2 (ENSCWAG00000011094) #25 ENSCWAG00000011075 ENSCWAG00000011059 ENSCWAG00000010975 PCDHA5 (ENSCWAG00000010956) ENSCWAG00000010936 #24 ENSCWAG00000010912 PCDHA1 (ENSCWAG00000010823) ZMAT2 (ENSCWAG00000010763) #23 HARS2 (ENSCWAG00000010142) #22 HARS1 (ENSCWAG00000009837) #21 DND1 (ENSCWAG00000009782) #20 WDR55 (ENSCWAG00000009743) #19 IK (ENSCWAG00000009630) #17 NDUFA2 (ENSCWAG00000009579) #18 TMCO6 (ENSCWAG00000009518) #16 CD14 (ENSCWAG00000009491) #14 SLC35A4 (ENSCWAG00000009469) #12 ENSCWAG00000009424 APBB3 (ENSCWAG00000009272) #11 SRA1 (ENSCWAG00000009227) #10 EIF4EBP3 (ENSCWAG00000009189) ANKHD1 (ENSCWAG00000009009) #9 SLC4A9 (ENSCWAG00000008616) #7 HBEGF (ENSCWAG00000008556) ENSCWAG00000008517 Pig MODERN SPECIES 10 ENSSSCG00000058913 ENSSSCG00000049531 ENSSSCG00000055269 ENSSSCG00000058366 ENSSSCG00000037515 ENSSSCG00000058260 ENSSSCG00000029442 ENSSSCG00000025603 ENSSSCG00000057570 ENSSSCG00000039859 PCDHA3 (ENSSSCG00000061745) ENSSSCG00000042156 PCDHAC2 (ENSSSCG00000029281) #25 ZMAT2 (ENSSSCG00000029158) #23 HARS2 (ENSSSCG00000014376) #22 HARS1 (ENSSSCG00000014375) #21 DND1 (ENSSSCG00000014374) #20 WDR55 (ENSSSCG00000032062) #19 IK (ENSSSCG00000014372) #17 NDUFA2 (ENSSSCG00000014371) #18 TMCO6 (ENSSSCG00000014370) #16 CD14 (ENSSSCG00000014369) #14 ENSSSCG00000014368 SLC35A4 (ENSSSCG00000014367) #12 ENSSSCG00000044155 APBB3 (ENSSSCG00000014366) #11 SRA1 (ENSSSCG00000055768) #10 EIF4EBP3 (ENSSSCG00000059551) ANKHD1 (ENSSSCG00000014364) #9 SLC4A9 (ENSSSCG00000014363) #7 HBEGF (ENSSSCG00000014362) Artiodactyla_a ANCESTRAL SPECIES 7 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164036 ENSGT00940000164882 ENSGT00940000163312 ENSGT00390000008200.e.b ENSGT00940000163903 ENSGT00390000008200.f ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164036 ENSGT00940000163312 ENSGT00390000008200.e.b ENSGT00940000163903 ENSGT00390000008200.f ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Cetacea ANCESTRAL SPECIES 1 ENSGT00900000143298 ENSGT00960000186917 ENSGT01090000260204.a.a.b ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00390000008200.e.b.a.a.a.a.b.a ENSGT00940000163312 ENSGT00390000008200.e.b.a.a.a.b ENSGT00390000008200.e.b.a.b ENSGT00940000164089 ENSGT00940000164747 ENSGT00390000008200.e.b.b.b ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Odontoceti ANCESTRAL SPECIES 1 ENSGT00900000143298 ENSGT00960000186917 ENSGT01090000260204.a.a.b ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00390000008200.e.b.a.a.a.a.b.a ENSGT00940000163312 ENSGT00390000008200.e.b.a.a.a.b ENSGT00390000008200.e.b.a.b ENSGT00940000164089 ENSGT00940000164747 ENSGT00390000008200.e.b.b.b ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00940000163424 #37 ENSGT00940000162842 ENSGT00940000163954 ENSGT00940000163362 #36 ENSGT00940000164093 #33 ENSGT00940000164011 ENSGT01090000260204.a.a.b ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165479 ENSGT00390000008200.e.b.a.b ENSGT00940000164089 ENSGT00940000164747 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.o #18 ENSGT00390000006178.p #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Dolphin MODERN SPECIES 2291 PCDHA12 (ENSTTRG00000001821) ENSTTRG00000001812 PCDHA2 (ENSTTRG00000001785) ZMAT2 (ENSTTRG00000001777) #23 HARS2 (ENSTTRG00000001771) #22 HARS1 (ENSTTRG00000001760) #21 ENSTTRG00000001755 #20 Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00940000164906 ENSGT00940000159725.l ENSGT00940000160861.d ENSGT00940000163424 #37 ENSGT00940000162842 ENSGT00940000163954 ENSGT00940000163362 #36 ENSGT00940000164093 #33 ENSGT01090000260204.a.a.b ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165479 ENSGT00390000008200.e.b.b.b ENSGT00390000010712.e #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.p #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT01010000228540 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Monodontidae ANCESTRAL SPECIES 7 ENSGT00940000159725.l ENSGT00940000160861.d ENSGT00940000163424 #37 ENSGT00940000163362 #36 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT01090000260204.a.a.a ENSGT01090000260204.a.a.b ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165479 ENSGT00390000008200.e.b.b.b ENSGT00390000010712.e #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.p #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT01010000228540 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Beluga whale MODERN SPECIES 34 PCDHGB3 (ENSDLEG00000001378) PCDHGA5 (ENSDLEG00000001366) PCDHGA3 (ENSDLEG00000001357) PCDHGA2 (ENSDLEG00000001349) ENSDLEG00000001344 #37 PCDHB14 (ENSDLEG00000001245) #36 PCDHB15 (ENSDLEG00000001201) PCDHB1 (ENSDLEG00000001183) #27 PCDHAC2 (ENSDLEG00000001163) #25 PCDHA13 (ENSDLEG00000001149) ENSDLEG00000001135 PCDHA2 (ENSDLEG00000001064) ENSDLEG00000001043 ENSDLEG00000001019 #23 HARS2 (ENSDLEG00000000760) #22 HARS1 (ENSDLEG00000000481) #21 DND1 (ENSDLEG00000000417) #20 WDR55 (ENSDLEG00000000395) #19 IK (ENSDLEG00000000321) #17 NDUFA2 (ENSDLEG00000000298) #18 TMCO6 (ENSDLEG00000000144) #16 CD14 (ENSDLEG00000006416) #14 SLC35A4 (ENSDLEG00000006412) #12 ENSDLEG00000006408 ENSDLEG00000006390 APBB3 (ENSDLEG00000006320) #11 SRA1 (ENSDLEG00000006306) #10 ANKHD1 (ENSDLEG00000005662) #9 SLC4A9 (ENSDLEG00000005426) #7 HBEGF (ENSDLEG00000005405) PFDN1 (ENSDLEG00000005390) Narwhal MODERN SPECIES 298 ENSMMNG00015002223 ENSMMNG00015002201 #31 ENSMMNG00015002187 ENSMMNG00015002171 #27 ENSMMNG00015002155 ENSMMNG00015002131 ENSMMNG00015002109 ENSMMNG00015002067 ENSMMNG00015002033 PCDHA3 (ENSMMNG00015002008) ENSMMNG00015001994 PCDHAC2 (ENSMMNG00015001954) #25 ENSMMNG00015001920 ENSMMNG00015001890 #23 HARS2 (ENSMMNG00015001750) #22 HARS1 (ENSMMNG00015001637) #21 DND1 (ENSMMNG00015001560) #20 WDR55 (ENSMMNG00015001531) #19 IK (ENSMMNG00015001473) #17 NDUFA2 (ENSMMNG00015001429) #18 TMCO6 (ENSMMNG00015001390) #16 CD14 (ENSMMNG00015001369) #14 SLC35A4 (ENSMMNG00015001351) #12 ENSMMNG00015001341 APBB3 (ENSMMNG00015001198) #11 SRA1 (ENSMMNG00015001114) #10 EIF4EBP3 (ENSMMNG00015001098) ANKHD1 (ENSMMNG00015000921) #9 SLC4A9 (ENSMMNG00015000761) #7 HBEGF (ENSMMNG00015000720) PFDN1 (ENSMMNG00015000703) Vaquita MODERN SPECIES 14 PCDHAC2 (ENSPSNG00000003013) #25 ENSPSNG00000003160 ENSPSNG00000003173 ENSPSNG00000003183 ENSPSNG00000003193 ENSPSNG00000003206 ENSPSNG00000003217 ENSPSNG00000003223 ENSPSNG00000003236 ENSPSNG00000003254 ENSPSNG00000003264 ENSPSNG00000003279 ENSPSNG00000003288 ZMAT2 (ENSPSNG00000003301) #23 HARS2 (ENSPSNG00000003489) #22 HARS1 (ENSPSNG00000009786) #21 DND1 (ENSPSNG00000010011) #20 WDR55 (ENSPSNG00000010108) #19 IK (ENSPSNG00000010172) #17 NDUFA2 (ENSPSNG00000010299) #18 TMCO6 (ENSPSNG00000010357) #16 CD14 (ENSPSNG00000010424) #14 ENSPSNG00000010450 ENSPSNG00000010492 APBB3 (ENSPSNG00000010584) #11 SRA1 (ENSPSNG00000011312) #10 EIF4EBP3 (ENSPSNG00000011416) ANKHD1 (ENSPSNG00000011482) #9 ENSPSNG00000011656 #7 HBEGF (ENSPSNG00000011755) PFDN1 (ENSPSNG00000011822) Sperm whale MODERN SPECIES 19 ENSPCTG00005001145 ENSPCTG00005001137 ENSPCTG00005001131 ENSPCTG00005001119 ENSPCTG00005001111 ENSPCTG00005001101 ENSPCTG00005001093 ENSPCTG00005001078 ENSPCTG00005001067 ENSPCTG00005001057 ENSPCTG00005001040 PCDHAC2 (ENSPCTG00005000764) #25 ENSPCTG00005000663 ZMAT2 (ENSPCTG00005000626) #23 HARS2 (ENSPCTG00005000529) #22 HARS (ENSPCTG00005000404) #21 DND1 (ENSPCTG00005020106) #20 WDR55 (ENSPCTG00005020077) #19 IK (ENSPCTG00005019904) #17 NDUFA2 (ENSPCTG00005019842) #18 TMCO6 (ENSPCTG00005019801) #16 CD14 (ENSPCTG00005019771) #14 SLC35A4 (ENSPCTG00005019755) #12 ENSPCTG00005019730 APBB3 (ENSPCTG00005019171) #11 SRA1 (ENSPCTG00005019114) #10 EIF4EBP3 (ENSPCTG00005019077) ANKHD1 (ENSPCTG00005018994) #9 PFDN1 (ENSPCTG00005018921) ENSPCTG00005018819 CYSTM1 (ENSPCTG00005018797) Blue whale MODERN SPECIES 14 ENSBMSG00010002364 ENSBMSG00010002347 ENSBMSG00010002327 ENSBMSG00010002316 ENSBMSG00010002295 ENSBMSG00010002281 ENSBMSG00010002268 ENSBMSG00010002253 PCDHAC2 (ENSBMSG00010001991) #25 ENSBMSG00010001885 ENSBMSG00010001878 PCDHA2 (ENSBMSG00010001862) ENSBMSG00010001854 ZMAT2 (ENSBMSG00010001832) #23 HARS2 (ENSBMSG00010001652) #22 HARS1 (ENSBMSG00010001483) #21 DND1 (ENSBMSG00010001404) #20 WDR55 (ENSBMSG00010001394) #19 IK (ENSBMSG00010001362) #17 NDUFA2 (ENSBMSG00010001334) #18 TMCO6 (ENSBMSG00010001310) #16 CD14 (ENSBMSG00010001298) #14 ENSBMSG00010001283 SLC35A4 (ENSBMSG00010001275) #12 APBB3 (ENSBMSG00010001042) #11 SRA1 (ENSBMSG00010000944) #10 EIF4EBP3 (ENSBMSG00010000927) ANKHD1 (ENSBMSG00010000466) #9 SLC4A9 (ENSBMSG00010000180) #7 HBEGF (ENSBMSG00010000125) PFDN1 (ENSBMSG00010000082) Pecora ANCESTRAL SPECIES ENSGT00900000143298 ENSGT00960000186917 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000165479 ENSGT00940000164036 ENSGT00940000163312 ENSGT00390000008200.f ENSGT00940000164747 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Percora_a ANCESTRAL SPECIES ENSGT00900000143298 ENSGT00960000186917 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000164036 ENSGT00940000163312 ENSGT00390000008200.f ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Bovidae ANCESTRAL SPECIES ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163894 ENSGT00940000163508.f #34 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000161185 #30 ENSGT00900000143298 ENSGT00960000186917 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00390000008200.f.d ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Caprinae ANCESTRAL SPECIES 3 ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163894 ENSGT00940000163508.f #34 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000161185 #30 ENSGT00960000186917 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Rambouillet Sheep MODERN SPECIES 21 PCDHB4 (ENSOARG00020015260) #30 ENSOARG00020015100 PCDHB1 (ENSOARG00020015075) #27 ENSOARG00020015032 ENSOARG00020015011 ENSOARG00020014990 ENSOARG00020014984 ENSOARG00020014899 ENSOARG00020014829 ENSOARG00020014815 ENSOARG00020014814 ENSOARG00020014803 PCDHAC2 (ENSOARG00020013410) #25 ZMAT2 (ENSOARG00020013261) #23 HARS2 (ENSOARG00020009907) #22 HARS (ENSOARG00020022713) #21 DND1 (ENSOARG00020022668) #20 WDR55 (ENSOARG00020022644) #19 IK (ENSOARG00020022605) #17 NDUFA2 (ENSOARG00020022560) #18 TMCO6 (ENSOARG00020022518) #16 CD14 (ENSOARG00020022493) #14 SLC35A4 (ENSOARG00020022487) #12 ENSOARG00020022454 APBB3 (ENSOARG00020022354) #11 SRA1 (ENSOARG00020022305) #10 EIF4EBP3 (ENSOARG00020022277) ANKHD1 (ENSOARG00020021597) #9 SLC4A9 (ENSOARG00020020984) #7 HBEGF (ENSOARG00020020934) PFDN1 (ENSOARG00020020899) Goat MODERN SPECIES 26 PCDHB4 (ENSCHIG00000001103) #30 ENSCHIG00000019176 PCDHB1 (ENSCHIG00000012052) #27 PCDHAC2 (ENSCHIG00000017560) #25 ENSCHIG00000008421 PCDHAC1 (ENSCHIG00000023589) PCDHA12 (ENSCHIG00000017341) PCDHA10 (ENSCHIG00000021311) ENSCHIG00000026502 ENSCHIG00000017345 PCDHA4 (ENSCHIG00000015750) #24 PCDHA3 (ENSCHIG00000017022) PCDHA2 (ENSCHIG00000012794) ZMAT2 (ENSCHIG00000014775) #23 HARS2 (ENSCHIG00000009904) #22 HARS1 (ENSCHIG00000018288) #21 DND1 (ENSCHIG00000026376) #20 WDR55 (ENSCHIG00000018807) #19 IK (ENSCHIG00000008932) #17 NDUFA2 (ENSCHIG00000027231) #18 TMCO6 (ENSCHIG00000012882) #16 CD14 (ENSCHIG00000011350) #14 SLC35A4 (ENSCHIG00000012468) #12 ENSCHIG00000025738 APBB3 (ENSCHIG00000019518) #11 SRA1 (ENSCHIG00000013652) #10 EIF4EBP3 (ENSCHIG00000026608) ANKHD1 (ENSCHIG00000016020) #9 SLC4A9 (ENSCHIG00000015915) #7 HBEGF (ENSCHIG00000022689) PFDN1 (ENSCHIG00000011157) Bovinae ANCESTRAL SPECIES 2 ENSGT00940000164093 #33 ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163894 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000161185 #30 ENSGT00900000143298 ENSGT00960000186917 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000164747 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.s.a #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Bos ANCESTRAL SPECIES 3 ENSGT00940000164093 #33 ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163894 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000161185 #30 ENSGT00900000143298 ENSGT00960000186917 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000164747 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.s.a #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Bos_a ANCESTRAL SPECIES 2 ENSGT00900000143298 ENSGT00960000186917 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00390000008200.f.c.b.a.a.a.b ENSGT00390000008200.f.c.b.a.a.a.a.a.a.a.a ENSGT00390000008200.f.c.b.a.a.a.a.a.a.a.b ENSGT00940000163312 ENSGT00390000008200.f.c.b.a.a.a.a.b.b ENSGT00940000164408 ENSGT00390000008200.f.c.b.a.b.b.b ENSGT00390000008200.f.c.b.a.b.b.a ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.s.a #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Domestic yak MODERN SPECIES 27 ENSBGRG00000022590 ENSBGRG00000022576 ENSBGRG00000022564 ENSBGRG00000022544 ENSBGRG00000022532 ENSBGRG00000022162 ENSBGRG00000022125 PCDHA10 (ENSBGRG00000022089) ENSBGRG00000022074 ENSBGRG00000022041 ENSBGRG00000022033 ENSBGRG00000022009 PCDHAC2 (ENSBGRG00000021397) #25 ZMAT2 (ENSBGRG00000021297) #23 HARS2 (ENSBGRG00000020191) #22 HARS1 (ENSBGRG00000018843) #21 DND1 (ENSBGRG00000018749) #20 WDR55 (ENSBGRG00000018638) #19 IK (ENSBGRG00000018393) #17 ENSBGRG00000018292 #18 TMCO6 (ENSBGRG00000018091) #16 CD14 (ENSBGRG00000018040) #14 SLC35A4 (ENSBGRG00000018014) #12 ENSBGRG00000017965 APBB3 (ENSBGRG00000016849) #11 SRA1 (ENSBGRG00000016751) #10 EIF4EBP3 (ENSBGRG00000016704) ANKHD1 (ENSBGRG00000015693) #9 SLC4A9 (ENSBGRG00000014553) #7 HBEGF (ENSBGRG00000014467) PFDN1 (ENSBGRG00000014350) Wild yak MODERN SPECIES 1158 ENSBMUG00000016707 #31 PCDHB6 (ENSBMUG00000016695) ENSBMUG00000016680 ENSBMUG00000016666 PCDHB1 (ENSBMUG00000016651) #27 ENSBMUG00000016635 ENSBMUG00000016621 ENSBMUG00000016605 ENSBMUG00000016584 ENSBMUG00000016572 PCDHA5 (ENSBMUG00000016547) ENSBMUG00000016539 PCDHAC2 (ENSBMUG00000016446) #25 ZMAT2 (ENSBMUG00000016262) #23 HARS2 (ENSBMUG00000016134) #22 HARS1 (ENSBMUG00000015699) #21 WDR55 (ENSBMUG00000015570) #19 IK (ENSBMUG00000015543) #17 ENSBMUG00000015491 #18 TMCO6 (ENSBMUG00000015453) #16 CD14 (ENSBMUG00000015420) #14 SLC35A4 (ENSBMUG00000015411) #12 ENSBMUG00000015392 APBB3 (ENSBMUG00000015272) #11 EIF4EBP3 (ENSBMUG00000015216) SRA1 (ENSBMUG00000015205) #10 ANKHD1 (ENSBMUG00000015158) #9 SLC4A9 (ENSBMUG00000015014) #7 HBEGF (ENSBMUG00000014920) PFDN1 (ENSBMUG00000014909) CYSTM1 (ENSBMUG00000014898) Bos_b ANCESTRAL SPECIES 2 ENSGT00390000008200.f.c.b.a.a.a.b ENSGT00390000008200.f.c.b.a.a.a.a.a.a.a.a ENSGT00390000008200.f.c.b.b ENSGT00390000008200.f.c.b.a.a.a.a.a.b ENSGT00390000008200.f.c.b.a.a.a.a.b.a ENSGT00390000008200.f.c.a ENSGT00940000163903 ENSGT00390000008200.f.c.b.a.b.a ENSGT00940000163846 #24 ENSGT00390000008200.f.c.b.a.b.b.b ENSGT00940000164089 ENSGT00390000008200.f.c.b.a.b.b.a ENSGT00940000164747 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.s.a #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Hybrid Bos Indicus MODERN SPECIES 26 PCDHB1 (ENSBIXG00005007143) #27 PCDHAC2 (ENSBIXG00005006748) #25 ENSBIXG00005015254 ENSBIXG00005015244 ENSBIXG00005002235 ENSBIXG00005015235 ENSBIXG00005015217 ENSBIXG00005015208 ENSBIXG00005015198 ENSBIXG00005015191 ENSBIXG00005015187 ENSBIXG00005015178 ENSBIXG00005015157 ZMAT2 (ENSBIXG00005005412) #23 HARS2 (ENSBIXG00005002218) #22 HARS1 (ENSBIXG00005014863) #21 DND1 (ENSBIXG00005006374) #20 WDR55 (ENSBIXG00005006373) #19 IK (ENSBIXG00005014746) #17 ENSBIXG00005014710 #18 TMCO6 (ENSBIXG00005014688) #16 CD14 (ENSBIXG00005014665) #14 SLC35A4 (ENSBIXG00005014618) #12 ENSBIXG00005014645 APBB3 (ENSBIXG00005014588) #11 SRA1 (ENSBIXG00005005637) #10 EIF4EBP3 (ENSBIXG00005006372) ANKHD1 (ENSBIXG00005014460) #9 SLC4A9 (ENSBIXG00005001917) #7 HBEGF (ENSBIXG00005014069) PFDN1 (ENSBIXG00005014050) Cow MODERN SPECIES 26 ENSBTAG00000051344 ENSBTAG00000048510 ENSBTAG00000052605 ENSBTAG00000054506 ENSBTAG00000054587 ENSBTAG00000049214 ENSBTAG00000015439 ENSBTAG00000049759 PCDHA4 (ENSBTAG00000049152) #24 ENSBTAG00000052107 PCDHA3 (ENSBTAG00000046717) ENSBTAG00000049097 PCDHA2 (ENSBTAG00000046190) ZMAT2 (ENSBTAG00000005441) #23 HARS2 (ENSBTAG00000025212) #22 HARS1 (ENSBTAG00000018847) #21 DND1 (ENSBTAG00000018845) #20 WDR55 (ENSBTAG00000015042) #19 IK (ENSBTAG00000015034) #17 NDUFA2 (ENSBTAG00000015041) #18 TMCO6 (ENSBTAG00000030589) #16 CD14 (ENSBTAG00000015032) #14 SLC35A4 (ENSBTAG00000030584) APBB3 (ENSBTAG00000001450) #11 SRA1 (ENSBTAG00000001449) #10 EIF4EBP3 (ENSBTAG00000052310) ENSBTAG00000010871 #9 ENSBTAG00000054857 #9 SLC4A9 (ENSBTAG00000021775) #7 HBEGF (ENSBTAG00000021766) PFDN1 (ENSBTAG00000051779) American bison MODERN SPECIES 3206 ENSBBBG00000011267 ENSBBBG00000002052 PCDHB1 (ENSBBBG00000011281) #27 ENSBBBG00000011287 ENSBBBG00000011293 ENSBBBG00000011295 ENSBBBG00000006835 ENSBBBG00000002112 PCDHA5 (ENSBBBG00000011520) PCDHA4 (ENSBBBG00000011524) #24 PCDHAC2 (ENSBBBG00000011644) #25 PCDHA2 (ENSBBBG00000011662) ENSBBBG00000011668 ZMAT2 (ENSBBBG00000011678) #23 HARS2 (ENSBBBG00000011918) #22 HARS1 (ENSBBBG00000012076) #21 DND1 (ENSBBBG00000012101) #20 WDR55 (ENSBBBG00000012117) #19 IK (ENSBBBG00000012141) #17 ENSBBBG00000012154 #18 TMCO6 (ENSBBBG00000012174) #16 CD14 (ENSBBBG00000012180) #14 SLC35A4 (ENSBBBG00000002292) #12 ENSBBBG00000012186 APBB3 (ENSBBBG00000012269) #11 SRA1 (ENSBBBG00000012282) #10 EIF4EBP3 (ENSBBBG00000002315) ANKHD1 (ENSBBBG00000012344) #9 SLC4A9 (ENSBBBG00000002354) #7 HBEGF (ENSBBBG00000008497) ENSBBBG00000002363 Siberian musk deer MODERN SPECIES 49 PCDHB1 (ENSMMSG00000004332) #27 ENSMMSG00000004342 PCDHAC2 (ENSMMSG00000004361) #25 ENSMMSG00000004386 PCDHA13 (ENSMMSG00000000070) ENSMMSG00000000097 PCDHA11 (ENSMMSG00000000153) ENSMMSG00000000255 PCDHA5 (ENSMMSG00000000282) PCDHA3 (ENSMMSG00000000343) ENSMMSG00000000746 ENSMMSG00000000768 ENSMMSG00000000785 ZMAT2 (ENSMMSG00000000811) #23 HARS2 (ENSMMSG00000000917) #22 HARS1 (ENSMMSG00000001462) #21 DND1 (ENSMMSG00000001574) #20 WDR55 (ENSMMSG00000001588) #19 ENSMMSG00000001604 #17 NDUFA2 (ENSMMSG00000001623) #18 TMCO6 (ENSMMSG00000001639) #16 CD14 (ENSMMSG00000001661) #14 ENSMMSG00000001668 SLC35A4 (ENSMMSG00000001680) #12 ENSMMSG00000001686 APBB3 (ENSMMSG00000001709) #11 ENSMMSG00000001739 #10 ANKHD1 (ENSMMSG00000001892) #9 SLC4A9 (ENSMMSG00000002111) #7 HBEGF (ENSMMSG00000002315) PFDN1 (ENSMMSG00000002336) Yarkand deer MODERN SPECIES 32 ARAP3 (ENSCHYG00000000730) FCHSD1 (ENSCHYG00000000556) RELL2 (ENSCHYG00000025303) HDAC3 (ENSCHYG00000025260) DIAPH1 (ENSCHYG00000024635) ENSCHYG00000024579 PCDHGC5 (ENSCHYG00000024191) ENSCHYG00000024141 ENSCHYG00000024110 ENSCHYG00000024053 PCDHB1 (ENSCHYG00000023997) #27 PCDHAC2 (ENSCHYG00000023934) #25 ENSCHYG00000023915 ZMAT2 (ENSCHYG00000023849) #23 HARS2 (ENSCHYG00000023232) #22 HARS1 (ENSCHYG00000022140) #21 DND1 (ENSCHYG00000022050) #20 WDR55 (ENSCHYG00000021976) #19 ENSCHYG00000021836 #17 ENSCHYG00000021747 #18 TMCO6 (ENSCHYG00000021515) #16 ENSCHYG00000021478 CD14 (ENSCHYG00000021456) #14 ENSCHYG00000021346 SLC35A4 (ENSCHYG00000021327) #12 ENSCHYG00000021290 APBB3 (ENSCHYG00000020143) #11 SRA1 (ENSCHYG00000020039) #10 EIF4EBP3 (ENSCHYG00000020000) ANKHD1 (ENSCHYG00000018958) #9 SLC4A9 (ENSCHYG00000018455) #7 Camelidae ANCESTRAL SPECIES 1 ENSGT00940000163201 ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00900000143298 ENSGT00960000186917 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000164882 ENSGT00940000163312 ENSGT00390000008200.e.b ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Arabian camel MODERN SPECIES 22 ENSCDRG00005012540 PCDHB1 (ENSCDRG00005012631) #27 PCDHAC2 (ENSCDRG00005012672) #25 ENSCDRG00005013203 PCDHA11 (ENSCDRG00005013224) ENSCDRG00005013400 ENSCDRG00005013418 ENSCDRG00005013437 ENSCDRG00005013457 ENSCDRG00005013462 ENSCDRG00005013574 ENSCDRG00005013671 ENSCDRG00005013684 ZMAT2 (ENSCDRG00005013705) #23 HARS2 (ENSCDRG00005013829) #22 HARS1 (ENSCDRG00005016848) #21 DND1 (ENSCDRG00005018824) #20 WDR55 (ENSCDRG00005018882) #19 IK (ENSCDRG00005018927) #17 NDUFA2 (ENSCDRG00005019021) #18 TMCO6 (ENSCDRG00005019066) #16 CD14 (ENSCDRG00005019128) #14 SLC35A4 (ENSCDRG00005019143) #12 ENSCDRG00005019151 APBB3 (ENSCDRG00005019186) #11 SRA1 (ENSCDRG00005019623) #10 EIF4EBP3 (ENSCDRG00005019628) ANKHD1 (ENSCDRG00005019648) #9 SLC4A9 (ENSCDRG00005019967) #7 HBEGF (ENSCDRG00005020281) PFDN1 (ENSCDRG00005020289) Laurasiatheria_b ANCESTRAL SPECIES 9 ENSGT00960000186917 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000164882 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Carnivora ANCESTRAL SPECIES 8 ENSGT00900000143298 ENSGT00960000186917 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000164882 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000164408 ENSGT00940000163846 #24 ENSGT00940000164089 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Caniformia ANCESTRAL SPECIES 5 ENSGT01090000260204.a.a.b ENSGT00940000161193 #29 ENSGT00900000143298 ENSGT00960000186917 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000164882 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000164089 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Caniformia_b ANCESTRAL SPECIES 4 ENSGT01090000260204.a.a.b ENSGT00940000161193 #29 ENSGT00900000143298 ENSGT00960000186917 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000164089 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Mustelinae ANCESTRAL SPECIES 17 ENSGT01090000260204.a.b ENSGT00940000163201 ENSGT01030000235990 ENSGT00940000163433 ENSGT00940000161185 #30 ENSGT01090000260204.a.a.b ENSGT00900000143298 ENSGT00960000186917 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165479 ENSGT00940000164089 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A American mink DUPLICATION American mink MODERN SPECIES 21 ENSNVIG00000012762 ENSNVIG00000012769 ENSNVIG00000012805 ENSNVIG00000012808 PCDHB6 (ENSNVIG00000012823) PCDHB4 (ENSNVIG00000012826) #30 ENSNVIG00000012839 ENSNVIG00000012842 ENSNVIG00000012843 ENSNVIG00000012846 PCDHB1 (ENSNVIG00000012848) #27 PCDHAC2 (ENSNVIG00000012864) #25 ENSNVIG00000012952 ZMAT2 (ENSNVIG00000012962) #23 HARS2 (ENSNVIG00000012976) #22 ENSNVIG00000013180 #21 DND1 (ENSNVIG00000013444) #20 WDR55 (ENSNVIG00000013456) #19 IK (ENSNVIG00000013473) #17 NDUFA2 (ENSNVIG00000013487) #18 TMCO6 (ENSNVIG00000013502) #16 CD14 (ENSNVIG00000013525) #14 SLC35A4 (ENSNVIG00000013539) #12 ENSNVIG00000013548 APBB3 (ENSNVIG00000013558) #11 EIF4EBP3 (ENSNVIG00000013703) ANKHD1 (ENSNVIG00000013724) #9 ENSNVIG00000013878 SLC4A9 (ENSNVIG00000013887) #7 HBEGF (ENSNVIG00000014005) PFDN1 (ENSNVIG00000014058) American mink MODERN SPECIES 6 PICALM (ENSNVIG00000003187) ENSNVIG00000003391 EED (ENSNVIG00000003411) CK073 (ENSNVIG00000003496) CCDC81 (ENSNVIG00000003531) ENSNVIG00000003607 ME3 (ENSNVIG00000003626) ENSNVIG00000003666 PRS23 (ENSNVIG00000003676) FZD4 (ENSNVIG00000003680) TM135 (ENSNVIG00000003728) ENSNVIG00000003901 E7ENT2 (ENSNVIG00000003909) CTSC (ENSNVIG00000003934) GRM5 (ENSNVIG00000004087) ENSNVIG00000004099 #21 ENSNVIG00000004112 TYR (ENSNVIG00000004130) NOX4 (ENSNVIG00000004160) FOLH1 (ENSNVIG00000004536) NAALAD2 (ENSNVIG00000004661) CHRD1 (ENSNVIG00000004738) FAT3 (ENSNVIG00000004831) MTNR1B (ENSNVIG00000004926) SLC36A4 (ENSNVIG00000004976) DEUP1 (ENSNVIG00000005001) ENSNVIG00000005094 CEP295 (ENSNVIG00000005105) TAF1D (ENSNVIG00000005172) C11orf54 (ENSNVIG00000005179) MED17 (ENSNVIG00000005216) Ferret MODERN SPECIES 175 DIAPH1 (ENSMPUG00000008293) ENSMPUG00000008317 PCDHGA7 (ENSMPUG00000008323) ENSMPUG00000008327 PCDHGA4 (ENSMPUG00000008329) ENSMPUG00000020046 TAF7 (ENSMPUG00000020047) SLC25A2 (ENSMPUG00000008334) #37 ENSMPUG00000008341 #36 PCDHB1 (ENSMPUG00000008344) #27 ENSMPUG00000008352 PCDHAC2 (ENSMPUG00000008358) #25 PCDHA3 (ENSMPUG00000008368) ZMAT2 (ENSMPUG00000008383) #23 HARS2 (ENSMPUG00000008422) #22 HARS1 (ENSMPUG00000008434) #21 WDR55 (ENSMPUG00000008443) #19 TMCO6 (ENSMPUG00000008448) #16 CD14 (ENSMPUG00000008459) #14 ENSMPUG00000008463 SLC35A4 (ENSMPUG00000019783) #12 APBB3 (ENSMPUG00000008482) #11 SRA1 (ENSMPUG00000008493) #10 ANKHD1 (ENSMPUG00000008542) #9 ENSMPUG00000008565 SLC4A9 (ENSMPUG00000008604) #7 HBEGF (ENSMPUG00000008972) ENSMPUG00000008982 ENSMPUG00000008993 PURA (ENSMPUG00000008996) NRG2 (ENSMPUG00000009008) Ursidae ANCESTRAL SPECIES 16 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00900000143298 ENSGT00960000186917 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00940000163312 ENSGT00390000008200 ENSGT00940000164089 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Ursus ANCESTRAL SPECIES 3 ENSGT00940000161185 #30 ENSGT00900000143298 ENSGT00940000163333 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000165479 ENSGT00390000008200.h ENSGT00940000163312 ENSGT00390000008200.g ENSGT00940000164089 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Polar bear MODERN SPECIES 173 ENSUMAG00000012818 PCDHA11 (ENSUMAG00000012820) ENSUMAG00000012823 ENSUMAG00000012825 ENSUMAG00000012827 ENSUMAG00000012831 ENSUMAG00000012832 ENSUMAG00000012834 PCDHA5 (ENSUMAG00000012836) ENSUMAG00000012839 PCDHA4 (ENSUMAG00000012842) #24 ENSUMAG00000012845 PCDHA1 (ENSUMAG00000012850) ZMAT2 (ENSUMAG00000012852) #23 HARS2 (ENSUMAG00000012858) #22 HARS1 (ENSUMAG00000012884) #21 WDR55 (ENSUMAG00000013223) #19 IK (ENSUMAG00000013228) #17 NDUFA2 (ENSUMAG00000013234) #18 TMCO6 (ENSUMAG00000013237) #16 CD14 (ENSUMAG00000013241) #14 SLC35A4 (ENSUMAG00000013259) #12 ENSUMAG00000013262 APBB3 (ENSUMAG00000013269) #11 SRA1 (ENSUMAG00000013276) #10 EIF4EBP3 (ENSUMAG00000013279) ANKHD1 (ENSUMAG00000013419) #9 SLC4A9 (ENSUMAG00000015246) #7 HBEGF (ENSUMAG00000015364) PFDN1 (ENSUMAG00000015373) CYSTM1 (ENSUMAG00000015383) American black bear MODERN SPECIES 2769 ENSUAMG00000004638 ENSUAMG00000004640 PCDHA3 (ENSUAMG00000004642) ENSUAMG00000004645 PCDHA1 (ENSUAMG00000004649) ENSUAMG00000004652 ZMAT2 (ENSUAMG00000004654) #23 HARS2 (ENSUAMG00000004656) #22 HARS1 (ENSUAMG00000004661) #21 DND1 (ENSUAMG00000004664) #20 WDR55 (ENSUAMG00000004665) #19 ENSUAMG00000004667 #17 Giant Panda MODERN SPECIES 13 ENSAMEG00000028223 #29 ENSAMEG00000028128 ENSAMEG00000024643 ENSAMEG00000030521 ENSAMEG00000020138 #27 ENSAMEG00000025377 ENSAMEG00000026580 ENSAMEG00000023874 ENSAMEG00000029022 ENSAMEG00000028363 ENSAMEG00000010731 #25 ENSAMEG00000026474 ENSAMEG00000027470 ZMAT2 (ENSAMEG00000010766) #23 HARS2 (ENSAMEG00000010779) #22 HARS1 (ENSAMEG00000010837) #21 DND1 (ENSAMEG00000010881) #20 WDR55 (ENSAMEG00000029034) #19 IK (ENSAMEG00000010888) #17 NDUFA2 (ENSAMEG00000010954) #18 TMCO6 (ENSAMEG00000010956) #16 CD14 (ENSAMEG00000030576) #14 SLC35A4 (ENSAMEG00000020139) #12 ENSAMEG00000010975 APBB3 (ENSAMEG00000010977) #11 SRA1 (ENSAMEG00000011005) #10 EIF4EBP3 (ENSAMEG00000029144) ANKHD1 (ENSAMEG00000011018) #9 SLC4A9 (ENSAMEG00000011090) #7 HBEGF (ENSAMEG00000029706) PFDN1 (ENSAMEG00000011189) Canidae DUPLICATION Canidae ANCESTRAL SPECIES 29 ENSGT00940000163469 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00960000186917 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165479 ENSGT00940000163903 ENSGT00390000008200 ENSGT00940000164089 ENSGT00940000164882 ENSGT00940000163312 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a.i #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.u #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844.c ENSGT00390000007844.d.a.a ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Canis_lupus DUPLICATION Canis_lupus ANCESTRAL SPECIES 6 ENSGT00940000161185 #30 ENSGT00940000163333 ENSGT00900000143298 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165479 ENSGT00940000163312 ENSGT00390000008200.l ENSGT00940000164089 ENSGT00940000165185 ENSGT00390000008200.k ENSGT00940000164408 ENSGT00940000153339.b.k.b ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a.i.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178.u #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844.c ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786.u.a.a.a Dog MODERN SPECIES 11 PCDHB6 (ENSCAFG00845002945) PCDHB5 (ENSCAFG00845002912) PCDHB4 (ENSCAFG00845002896) #30 ENSCAFG00845002878 ENSCAFG00845002853 PCDHB1 (ENSCAFG00845002830) #27 ENSCAFG00845002743 ENSCAFG00845002727 ENSCAFG00845002711 ENSCAFG00845002698 ENSCAFG00845002679 ENSCAFG00845002576 #25 ENSCAFG00845002466 ZMAT2 (ENSCAFG00845002442) #23 HARS2 (ENSCAFG00845002374) #22 HARS1 (ENSCAFG00845002179) #21 DND1 (ENSCAFG00845002066) #20 WDR55 (ENSCAFG00845002039) #19 IK (ENSCAFG00845002021) #17 NDUFA2 (ENSCAFG00845001992) #18 TMCO6 (ENSCAFG00845001948) #16 CD14 (ENSCAFG00845001909) #14 SLC35A4 (ENSCAFG00845001883) #12 APBB3 (ENSCAFG00845001840) #11 APBB3 (ENSCAFG00845001716) #10 EIF4EBP3 (ENSCAFG00845001691) ANKHD1 (ENSCAFG00845001622) #9 ENSCAFG00845001482 SLC4A9 (ENSCAFG00845001336) #7 HBEGF (ENSCAFG00845001249) PFDN1 (ENSCAFG00845001230) Dingo MODERN SPECIES 98 ENSCAFG00020000303 ENSCAFG00020000307 ENSCAFG00020000315 ENSCAFG00020000320 ENSCAFG00020000334 ENSCAFG00020000341 PCDHA4 (ENSCAFG00020000345) #24 ENSCAFG00020000356 PCDHA3 (ENSCAFG00020000363) ENSCAFG00020000366 PCDHA1 (ENSCAFG00020000370) ENSCAFG00020000385 ENSCAFG00020000400 ZMAT2 (ENSCAFG00020000423) #23 HARS2 (ENSCAFG00020000485) #22 ENSCAFG00020000925 #21 DND1 (ENSCAFG00020001055) #20 WDR55 (ENSCAFG00020001074) #19 ENSCAFG00020001105 #17 ENSCAFG00020001260 ENSCAFG00020001429 #18 TMCO6 (ENSCAFG00020001449) #16 CD14 (ENSCAFG00020001518) #14 SLC35A4 (ENSCAFG00020001522) #12 ENSCAFG00020001529 APBB3 (ENSCAFG00020001619) #11 SRA1 (ENSCAFG00020001924) #10 EIF4EBP3 (ENSCAFG00020001947) ANKHD1 (ENSCAFG00020002077) #9 SLC4A9 (ENSCAFG00020002964) #7 HBEGF (ENSCAFG00020003003) Canis_lupus ANCESTRAL SPECIES 22 ENSGT00390000015476.d.a ENSGT00390000015476.c ENSGT00940000160340.c.c.b.a.b ENSGT00940000155028.q.b ENSGT00950000182865.b.a.b.b.b.b ENSGT00390000013938 ENSGT01050000244955.a.b ENSGT01050000244897.a.b.a ENSGT00940000161929 ENSGT00950000183071.a.b ENSGT00950000182897.B.a.b.a ENSGT00940000157245 ENSGT00940000158972 ENSGT00940000157904.d ENSGT01100000263574.b.i.a ENSGT00390000005922.b.d.b.a.i.b #21 ENSGT01100000263478.b.a.a ENSGT00940000153904.b ENSGT00390000006788.a.a ENSGT00680000100018.a.b ENSGT00890000139472 ENSGT01060000248564.b.b ENSGT00940000159471 ENSGT00940000162128 ENSGT00940000160863 ENSGT00940000156455 ENSGT00390000002732.n.pb.b ENSGT00940000161870 ENSGT00940000153737.a ENSGT00390000008142 ENSGT00940000165796 Dingo MODERN SPECIES 347 ENSCAFG00020000498 ENSCAFG00020000505 ENSCAFG00020000531 PHF6 (ENSCAFG00020000535) CCDC160 (ENSCAFG00020000547) GPC3 (ENSCAFG00020000586) GPC4 (ENSCAFG00020000592) ENSCAFG00020000596 ENSCAFG00020000611 ENSCAFG00020000615 ENSCAFG00020000639 MBNL3 (ENSCAFG00020000653) RAP2C (ENSCAFG00020000728) FRMD7 (ENSCAFG00020000739) STK26 (ENSCAFG00020000768) ENSCAFG00020000826 #21 IGSF1 (ENSCAFG00020000850) ARHGAP36 (ENSCAFG00020000912) ENOX2 (ENSCAFG00020000943) ENSCAFG00020001039 RBMX2 (ENSCAFG00020001063) GPR119 (ENSCAFG00020001070) SLC25A14 (ENSCAFG00020001088) ZNF280C (ENSCAFG00020001255) RAB33A (ENSCAFG00020001403) AIFM1 (ENSCAFG00020001426) ENSCAFG00020001440 ELF4 (ENSCAFG00020001458) ENSCAFG00020001479 ENSCAFG00020001499 ENSCAFG00020001508 Dog MODERN SPECIES 144 PABIR2 (ENSCAFG00845025114) PLAC1 (ENSCAFG00845025042) HPRT1 (ENSCAFG00845024808) PHF6 (ENSCAFG00845024645) CCDC160 (ENSCAFG00845024596) GPC3 (ENSCAFG00845031100) ENSCAFG00845031099 GPC4 (ENSCAFG00845031098) USP26 (ENSCAFG00845031095) HS6ST2 (ENSCAFG00845031094) MBNL3 (ENSCAFG00845031089) RAP2C (ENSCAFG00845031086) FRMD7 (ENSCAFG00845031084) STK26 (ENSCAFG00845031083) ENSCAFG00845031078 ENSCAFG00845031076 #21 IGSF1 (ENSCAFG00845031072) ARHGAP36 (ENSCAFG00845031067) ENOX2 (ENSCAFG00845031064) ENSCAFG00845031056 RBMX2 (ENSCAFG00845031049) GPR119 (ENSCAFG00845031046) SLC25A14 (ENSCAFG00845031040) ZNF280C (ENSCAFG00845031036) RAB33A (ENSCAFG00845031035) AIFM1 (ENSCAFG00845031031) ENSCAFG00845031027 ELF4 (ENSCAFG00845031025) BCORL1 (ENSCAFG00845031020) ENSCAFG00845031018 ENSCAFG00845031016 Red fox MODERN SPECIES 4 PCDHB14 (ENSVVUG00000017410) #36 PCDHB7 (ENSVVUG00000017405) PCDHB6 (ENSVVUG00000017403) PCDHB5 (ENSVVUG00000017382) ENSVVUG00000017380 ENSVVUG00000017376 PCDHB1 (ENSVVUG00000017374) #27 PCDHAC2 (ENSVVUG00000017368) #25 PCDHA11 (ENSVVUG00000017333) ENSVVUG00000017323 ENSVVUG00000017320 PCDHA4 (ENSVVUG00000017316) #24 ENSVVUG00000017313 ZMAT2 (ENSVVUG00000017308) #23 HARS2 (ENSVVUG00000015439) #22 HARS (ENSVVUG00000013620) #21 DND1 (ENSVVUG00000013559) #20 ENSVVUG00000013006 #19 NDUFA2 (ENSVVUG00000012989) #18 TMCO6 (ENSVVUG00000012955) #16 CD14 (ENSVVUG00000012947) #14 SLC35A4 (ENSVVUG00000012944) #12 ENSVVUG00000012942 APBB3 (ENSVVUG00000012406) #11 SRA1 (ENSVVUG00000012374) #10 EIF4EBP3 (ENSVVUG00000012362) ANKHD1 (ENSVVUG00000010478) #9 ENSVVUG00000010398 SLC4A9 (ENSVVUG00000010143) #7 HBEGF (ENSVVUG00000010124) CYSTM1 (ENSVVUG00000010100) Canidae ANCESTRAL SPECIES 12 ENSGT00950000182959.a.b.b.a ENSGT00940000159215 ENSGT00940000160698 ENSGT00940000156120.a ENSGT00390000000406 ENSGT00940000155394 ENSGT01100000263748 ENSGT00940000158014 ENSGT00940000157713 ENSGT00940000154980.cb ENSGT00530000063074.b.b ENSGT00940000156622 ENSGT00390000002417 ENSGT00940000153362.a ENSGT00440000039564.b ENSGT00390000005922.b.d.b.a.j #21 ENSGT00390000018775 ENSGT00940000163058 ENSGT00940000163275 ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888.e.a ENSGT00940000153886.a.a.k ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402.c.b.d ENSGT00400000023212 ENSGT00940000161408 ENSGT00940000161599 ENSGT00390000015830 Red fox MODERN SPECIES 9 ENSVVUG00000010537 MYF6 (ENSVVUG00000010529) PTPRQ (ENSVVUG00000010403) ENSVVUG00000010366 OTOGL (ENSVVUG00000010103) PPP1R12A (ENSVVUG00000010043) PAWR (ENSVVUG00000010028) SYT1 (ENSVVUG00000009998) NAV3 (ENSVVUG00000009882) E2F7 (ENSVVUG00000009839) CSRP2 (ENSVVUG00000009828) ZDHHC17 (ENSVVUG00000009811) OSBPL8 (ENSVVUG00000009692) BBS10 (ENSVVUG00000009650) NAP1L1 (ENSVVUG00000009610) ENSVVUG00000009581 #21 KRR1 (ENSVVUG00000009566) OR4E1 (ENSVVUG00000009561) OR4E2 (ENSVVUG00000009557) ENSVVUG00000009540 METTL3 (ENSVVUG00000009513) TOX4 (ENSVVUG00000009505) RAB2B (ENSVVUG00000009502) CHD8 (ENSVVUG00000009444) SUPT16H (ENSVVUG00000009434) ENSVVUG00000009422 ENSVVUG00000009420 ENSVVUG00000009265 TMEM253 (ENSVVUG00000009250) ENSVVUG00000009241 ARHGEF40 (ENSVVUG00000009112) Canis_lupus ANCESTRAL SPECIES 16 ENSGT00940000160698 ENSGT00940000156120.a ENSGT00390000000406 ENSGT00940000155394 ENSGT01100000263748 ENSGT00940000158014 ENSGT00940000158890.p.a.f ENSGT00940000157713.q ENSGT00940000154980.cb ENSGT00530000063074.b.b ENSGT00940000156622 ENSGT00390000002417 ENSGT00940000153362.a ENSGT00440000039564.b ENSGT00940000154612.m.a.g.a.b ENSGT00390000005922.b.d.b.a.j #21 ENSGT00390000018775 ENSGT00940000163058 ENSGT00940000163275 ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888.e.a ENSGT00940000153886.a.a.k ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402.d ENSGT00400000023212 ENSGT00940000161408 ENSGT00940000161599 ENSGT00390000015830 Dingo MODERN SPECIES 277 PAWR (ENSCAFG00020015607) SYT1 (ENSCAFG00020015603) ENSCAFG00020015601 NAV3 (ENSCAFG00020015546) ENSCAFG00020015535 ENSCAFG00020015528 ENSCAFG00020015522 ENSCAFG00020015518 CSRP2 (ENSCAFG00020015512) ZDHHC17 (ENSCAFG00020015453) OSBPL8 (ENSCAFG00020015356) BBS10 (ENSCAFG00020015335) NAP1L1 (ENSCAFG00020015328) ENSCAFG00020015316 ENSCAFG00020015310 ENSCAFG00020015296 #21 KRR1 (ENSCAFG00020015286) OR4E1 (ENSCAFG00020015285) OR4E2 (ENSCAFG00020015283) SALL2 (ENSCAFG00020015273) METTL3 (ENSCAFG00020015265) ENSCAFG00020015261 ENSCAFG00020015235 ENSCAFG00020015220 CHD8 (ENSCAFG00020014565) ENSCAFG00020014531 SUPT16H (ENSCAFG00020014529) RPGRIP1 (ENSCAFG00020014517) ENSCAFG00020014469 TMEM253 (ENSCAFG00020014456) ZNF219 (ENSCAFG00020014450) Felidae ANCESTRAL SPECIES 6 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT01090000260204.a.a.b ENSGT00940000161193 #29 ENSGT00900000143298 ENSGT00960000186917 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00390000008200.m.a.a ENSGT00390000008200.m.a.b.a.a ENSGT00940000163312 ENSGT00390000008200.n ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786.q Panthera ANCESTRAL SPECIES 6 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00900000143298 ENSGT00960000186917 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00390000008200.m.a.a ENSGT00390000008200.m.a.b.a.a ENSGT00940000163312 ENSGT00390000008200.n ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786.q Panthera_a ANCESTRAL SPECIES 3 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00900000143298 ENSGT00940000163333 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00390000008200.m.a.a ENSGT00390000008200.m.a.b.a.a ENSGT00940000163312 ENSGT00390000008200.n ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225.e #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786.q leopard MODERN SPECIES 98 ENSPPRG00000016740 ENSPPRG00000016771 ENSPPRG00000016785 ENSPPRG00000002775 ENSPPRG00000016801 ENSPPRG00000016834 ENSPPRG00000016846 ENSPPRG00000016862 ENSPPRG00000016886 ENSPPRG00000016902 ENSPPRG00000016918 ENSPPRG00000016933 ENSPPRG00000016942 ZMAT2 (ENSPPRG00000004163) #23 HARS2 (ENSPPRG00000005394) #22 HARS1 (ENSPPRG00000008820) #21 ENSPPRG00000009501 #20 WDR55 (ENSPPRG00000009842) #19 IK (ENSPPRG00000010062) #17 NDUFA2 (ENSPPRG00000010914) #18 TMCO6 (ENSPPRG00000012430) #16 CD14 (ENSPPRG00000012838) #14 SLC35A4 (ENSPPRG00000017469) #12 ENSPPRG00000013902 APBB3 (ENSPPRG00000024348) #11 SRA1 (ENSPPRG00000023984) #10 EIF4EBP3 (ENSPPRG00000023846) ENSPPRG00000023568 #9 ENSPPRG00000023407 ENSPPRG00000000371 #9 SLC4A9 (ENSPPRG00000006476) #7 lion MODERN SPECIES HDAC3 (ENSPLOG00000000526) DIAPH1 (ENSPLOG00000000570) PCDHGC5 (ENSPLOG00000000683) ENSPLOG00000000791 ENSPLOG00000000801 ENSPLOG00000000811 PCDHB1 (ENSPLOG00000000824) #27 PCDHAC2 (ENSPLOG00000000879) #25 ENSPLOG00000000963 ENSPLOG00000000969 ENSPLOG00000000976 ENSPLOG00000000984 ENSPLOG00000000996 ZMAT2 (ENSPLOG00000001007) #23 HARS2 (ENSPLOG00000001136) #22 HARS1 (ENSPLOG00000001403) #21 ENSPLOG00000001584 #20 WDR55 (ENSPLOG00000001601) #19 IK (ENSPLOG00000001628) #17 NDUFA2 (ENSPLOG00000001666) #18 TMCO6 (ENSPLOG00000001690) #16 CD14 (ENSPLOG00000001718) #14 SLC35A4 (ENSPLOG00000001750) #12 ENSPLOG00000001757 APBB3 (ENSPLOG00000001795) #11 SRA1 (ENSPLOG00000001894) #10 EIF4EBP3 (ENSPLOG00000001907) ANKHD1 (ENSPLOG00000001996) #9 SLC4A9 (ENSPLOG00000002193) #7 HBEGF (ENSPLOG00000002301) PFDN1 (ENSPLOG00000002312) Tiger MODERN SPECIES 107 PCDHB16 (ENSPTIG00000005336) #33 PCDHB13 (ENSPTIG00000018426) ENSPTIG00000017999 #31 PCDHB6 (ENSPTIG00000017864) PCDHB5 (ENSPTIG00000005325) ENSPTIG00000005319 ENSPTIG00000015035 ENSPTIG00000014665 PCDHB1 (ENSPTIG00000005311) #27 PCDHAC2 (ENSPTIG00000011988) #25 PCDHA5 (ENSPTIG00000011039) PCDHA4 (ENSPTIG00000009710) #24 ENSPTIG00000009491 ZMAT2 (ENSPTIG00000008652) #23 HARS2 (ENSPTIG00000007146) #22 HARS1 (ENSPTIG00000020494) #21 ENSPTIG00000020069 WDR55 (ENSPTIG00000019838) #19 IK (ENSPTIG00000018863) #17 NDUFA2 (ENSPTIG00000018315) #18 TMCO6 (ENSPTIG00000017178) #16 CD14 (ENSPTIG00000017126) #14 SLC35A4 (ENSPTIG00000004896) #12 ENSPTIG00000015182 APBB3 (ENSPTIG00000012028) #11 SRA1 (ENSPTIG00000011361) #10 EIF4EBP3 (ENSPTIG00000010875) ENSPTIG00000009082 #9 ENSPTIG00000007099 #9 SLC4A9 (ENSPTIG00000020507) #7 HBEGF (ENSPTIG00000019582) Cat MODERN SPECIES ENSFCAG00000035393 PCDHB1 (ENSFCAG00000003687) #27 ENSFCAG00000041017 ENSFCAG00000040254 ENSFCAG00000045578 ENSFCAG00000037079 ENSFCAG00000042372 ENSFCAG00000040890 ENSFCAG00000043492 ENSFCAG00000042926 ENSFCAG00000041450 ENSFCAG00000042305 PCDHAC2 (ENSFCAG00000003685) #25 ZMAT2 (ENSFCAG00000001289) #23 HARS2 (ENSFCAG00000001288) #22 HARS1 (ENSFCAG00000001286) #21 WDR55 (ENSFCAG00000031277) #19 IK (ENSFCAG00000001279) #17 NDUFA2 (ENSFCAG00000001282) #18 TMCO6 (ENSFCAG00000001280) #16 CD14 (ENSFCAG00000001278) #14 SLC35A4 (ENSFCAG00000001277) #12 ENSFCAG00000039181 APBB3 (ENSFCAG00000001276) #11 SRA1 (ENSFCAG00000035180) #10 ANKHD1 (ENSFCAG00000001275) #9 SLC4A9 (ENSFCAG00000001274) #7 HBEGF (ENSFCAG00000001273) PFDN1 (ENSFCAG00000001272) CYSTM1 (ENSFCAG00000001271) IGIP (ENSFCAG00000031452) Laurasiatheria_c ANCESTRAL SPECIES 7 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00900000143298 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000163312 ENSGT00390000008200 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Equus ANCESTRAL SPECIES 6 ENSGT01090000260204.b ENSGT00940000164011 ENSGT00940000163469 ENSGT00940000163786 #31 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00900000143298 ENSGT00910000147044 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000163312 ENSGT00390000008200.o ENSGT00390000008200.p ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Horse MODERN SPECIES 5 DIAPH1 (ENSECAG00000020822) PCDHGC5 (ENSECAG00000016123) ENSECAG00000036637 PCDHGA7 (ENSECAG00000044783) ENSECAG00000029924 PCDHB14 (ENSECAG00000031230) #36 ENSECAG00000037002 #31 PCDHB2 (ENSECAG00000043461) PCDHB1 (ENSECAG00000001755) #27 ENSECAG00000010377 ENSECAG00000013199 ENSECAG00000045572 ENSECAG00000049057 ZMAT2 (ENSECAG00000014412) #23 HARS2 (ENSECAG00000014461) #22 HARS1 (ENSECAG00000021986) #21 DND1 (ENSECAG00000059455) #20 WDR55 (ENSECAG00000043759) #19 ENSECAG00000012779 #17 NDUFA2 (ENSECAG00000023131) #18 ENSECAG00000031163 #16 CD14 (ENSECAG00000001784) #14 ENSECAG00000038120 #17 ENSECAG00000033774 #18 ENSECAG00000039506 #16 CD14 (ENSECAG00000056386) #14 ENSECAG00000024241 SLC35A4 (ENSECAG00000004900) #12 APBB3 (ENSECAG00000003436) #11 SRA1 (ENSECAG00000048166) #10 ANKHD1 (ENSECAG00000015036) #9 Donkey MODERN SPECIES 3 PCDHB7 (ENSEASG00005023533) ENSEASG00005033898 #31 PCDHB3 (ENSEASG00005018118) #29 ENSEASG00005018120 ENSEASG00005018110 ENSEASG00005023945 ENSEASG00005018105 PCDHB1 (ENSEASG00005018102) #27 ENSEASG00005030084 ENSEASG00005028226 ENSEASG00005018081 ENSEASG00005031256 PCDHAC2 (ENSEASG00005018065) #25 ZMAT2 (ENSEASG00005025162) #23 HARS2 (ENSEASG00005017563) #22 HARS1 (ENSEASG00005017536) #21 WDR55 (ENSEASG00005017529) #19 IK (ENSEASG00005017521) #17 NDUFA2 (ENSEASG00005017518) #18 TMCO6 (ENSEASG00005017504) #16 ENSEASG00005026915 #14 ENSEASG00005017493 APBB3 (ENSEASG00005017487) #11 SLC35A4 (ENSEASG00005032362) #12 SRA1 (ENSEASG00005034530) #10 EIF4EBP3 (ENSEASG00005029306) ANKHD1 (ENSEASG00005016592) #9 SLC4A9 (ENSEASG00005016424) #7 HBEGF (ENSEASG00005016411) PFDN1 (ENSEASG00005038284) CYSTM1 (ENSEASG00005037941) Chiroptera ANCESTRAL SPECIES 1 ENSGT00940000163469 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00900000143298 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Microchiroptera ANCESTRAL SPECIES 3 ENSGT00940000163469 ENSGT00940000163786 #31 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00900000143298 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000164747 ENSGT00940000165185 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Microbat DUPLICATION Microbat DUPLICATION Microbat MODERN SPECIES 965 ENSMLUG00000004593 PCDHB16 (ENSMLUG00000013737) #33 PCDHB13 (ENSMLUG00000000910) ENSMLUG00000022929 #31 PCDHB5 (ENSMLUG00000010066) PCDHB2 (ENSMLUG00000010031) PCDHB1 (ENSMLUG00000014013) #27 PCDHAC2 (ENSMLUG00000014008) #25 PCDHAC1 (ENSMLUG00000030446) PCDHA11 (ENSMLUG00000014001) PCDHA10 (ENSMLUG00000016845) PCDHA2 (ENSMLUG00000013985) PCDHA1 (ENSMLUG00000013983) ZMAT2 (ENSMLUG00000017525) #23 HARS2 (ENSMLUG00000017524) #22 ENSMLUG00000003199 #21 DND1 (ENSMLUG00000003195) #20 ENSMLUG00000003177 #19 TMCO6 (ENSMLUG00000003184) #16 CD14 (ENSMLUG00000003174) #14 SLC35A4 (ENSMLUG00000003168) #12 APBB3 (ENSMLUG00000003148) #11 SRA1 (ENSMLUG00000022959) #10 ANKHD1 (ENSMLUG00000003126) #9 SLC4A9 (ENSMLUG00000003111) #7 HBEGF (ENSMLUG00000003107) ENSMLUG00000003106 CYSTM1 (ENSMLUG00000003105) PURA (ENSMLUG00000003093) ENSMLUG00000023421 ENSMLUG00000003075 Microbat MODERN SPECIES 1007 TIPARP (ENSMLUG00000006995) LEKR1 (ENSMLUG00000012119) CCNL1 (ENSMLUG00000015049) PTX3 (ENSMLUG00000000487) VEPH1 (ENSMLUG00000000477) SHOX2 (ENSMLUG00000024898) MLF1 (ENSMLUG00000000447) LXN (ENSMLUG00000000462) GFM1 (ENSMLUG00000000452) RARRES1 (ENSMLUG00000000467) MFSD1 (ENSMLUG00000001574) ENSMLUG00000016328 IQCJ (ENSMLUG00000029191) SCHIP1 (ENSMLUG00000028779) IL12A (ENSMLUG00000014101) ENSMLUG00000028009 #21 ENSMLUG00000025073 Microbat MODERN SPECIES 941 SH3BGRL (ENSMLUG00000010051) ENSMLUG00000025070 ENSMLUG00000006065 POU3F4 (ENSMLUG00000004140) ENSMLUG00000011590 RPS6KA6 (ENSMLUG00000015440) ENSMLUG00000027800 ENSMLUG00000006649 ENSMLUG00000027285 ENSMLUG00000022222 ENSMLUG00000026037 APOOL (ENSMLUG00000011384) ZNF711 (ENSMLUG00000009270) POF1B (ENSMLUG00000009283) ENSMLUG00000024162 ENSMLUG00000030018 #21 CHM (ENSMLUG00000011286) ENSMLUG00000024029 ENSMLUG00000006724 ENSMLUG00000025133 Greater horseshoe bat MODERN SPECIES 16 ENSRFEG00010006071 #34 PCDHB16 (ENSRFEG00010006048) #33 ENSRFEG00010006014 PCDHB7 (ENSRFEG00010005990) ENSRFEG00010005968 #31 PCDHB6 (ENSRFEG00010005954) PCDHB5 (ENSRFEG00010005928) PCDHB4 (ENSRFEG00010016878) #30 PCDHB3 (ENSRFEG00010016855) #29 ENSRFEG00010016842 ENSRFEG00010016792 PCDHB1 (ENSRFEG00010016770) #27 PCDHAC2 (ENSRFEG00010015437) #25 ZMAT2 (ENSRFEG00010015329) #23 HARS2 (ENSRFEG00010014579) #22 HARS1 (ENSRFEG00010013452) #21 DND1 (ENSRFEG00010013376) #20 WDR55 (ENSRFEG00010013236) #19 IK (ENSRFEG00010012945) #17 NDUFA2 (ENSRFEG00010012820) #18 TMCO6 (ENSRFEG00010012767) #16 CD14 (ENSRFEG00010012734) #14 ENSRFEG00010012587 SLC35A4 (ENSRFEG00010012565) #12 ENSRFEG00010012516 APBB3 (ENSRFEG00010012315) #11 EIF4EBP3 (ENSRFEG00010012240) ANKHD1 (ENSRFEG00010012041) #9 SLC4A9 (ENSRFEG00010010874) #7 HBEGF (ENSRFEG00010010763) PFDN1 (ENSRFEG00010010709) Megabat MODERN SPECIES 1164 ZMAT2 (ENSPVAG00000009717) #23 HARS2 (ENSPVAG00000009714) #22 HARS1 (ENSPVAG00000009711) #21 DND1 (ENSPVAG00000009710) #20 WDR55 (ENSPVAG00000009709) #19 NDUFA2 (ENSPVAG00000009708) #18 TMCO6 (ENSPVAG00000009705) #16 IK (ENSPVAG00000009703) #17 CD14 (ENSPVAG00000009702) #14 APBB3 (ENSPVAG00000009699) #11 SRA1 (ENSPVAG00000009698) #10 ANKHD1 (ENSPVAG00000009697) #9 SLC4A9 (ENSPVAG00000009695) #7 HBEGF (ENSPVAG00000009694) PFDN1 (ENSPVAG00000009692) CYSTM1 (ENSPVAG00000009691) IGIP (ENSPVAG00000009690) PURA (ENSPVAG00000009689) Eulipotyphla ANCESTRAL SPECIES 13 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00940000153727.b #17 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000000002.a.a.b #11 ENSGT00940000153768.b #9 Hedgehog MODERN SPECIES 2113 HARS2 (ENSEEUG00000004539) #22 HARS1 (ENSEEUG00000004415) #21 DND1 (ENSEEUG00000004338) #20 WDR55 (ENSEEUG00000004281) #19 Common shrew MODERN SPECIES 1015 HARS2 (ENSSARG00000007427) #22 HARS1 (ENSSARG00000007413) #21 DND1 (ENSSARG00000007411) #20 NDUFA2 (ENSSARG00000007407) #18 ENSSARG00000007399 #16 IK (ENSSARG00000007388) #17 CD14 (ENSSARG00000007380) #14 SLC35A4 (ENSSARG00000007375) #12 APBB3 (ENSSARG00000007360) #11 ANKHD1 (ENSSARG00000007287) #9 Atlantogenata ANCESTRAL SPECIES ENSGT00940000163469 ENSGT00940000163433 ENSGT00940000157793 ENSGT00940000161185 #30 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000163312 ENSGT00940000164089 ENSGT00390000008200 ENSGT00940000164747 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Xenarthra ANCESTRAL SPECIES 33 ENSGT00940000163903 ENSGT00390000008200 ENSGT00940000164747 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000171414 Armadillo MODERN SPECIES 3726 ENSDNOG00000044114 ENSDNOG00000046249 ENSDNOG00000017296 ENSDNOG00000000875 ZMAT2 (ENSDNOG00000015171) #23 HARS2 (ENSDNOG00000015148) #22 HARS1 (ENSDNOG00000015147) #21 DND1 (ENSDNOG00000013017) #20 ENSDNOG00000009727 #17 NDUFA2 (ENSDNOG00000009777) #18 TMCO6 (ENSDNOG00000009762) #16 CD14 (ENSDNOG00000039061) #14 ENSDNOG00000048239 SLC35A4 (ENSDNOG00000014192) #12 ENSDNOG00000038827 APBB3 (ENSDNOG00000014174) #11 SRA1 (ENSDNOG00000045277) #10 ANKHD1 (ENSDNOG00000014116) #9 SLC4A9 (ENSDNOG00000014958) #7 HBEGF (ENSDNOG00000037258) PFDN1 (ENSDNOG00000033107) ENSDNOG00000018450 Sloth MODERN SPECIES 1261 ZMAT2 (ENSCHOG00000007795) #23 HARS2 (ENSCHOG00000007782) #22 HARS1 (ENSCHOG00000007766) #21 ENSCHOG00000007758 IK (ENSCHOG00000007738) #17 Afrotheria ANCESTRAL SPECIES 7 ENSGT00940000158869 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00940000160487 ENSGT00940000159910 ENSGT00940000162232 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000163312 ENSGT00940000164089 ENSGT00390000008200 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00500000045016 Afrotheria_a ANCESTRAL SPECIES 7 ENSGT00940000158869 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00940000160487 ENSGT00940000159910 ENSGT00940000162232 ENSGT00940000161193 #29 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00940000163312 ENSGT00940000164089 ENSGT00390000008200 ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00390000009262 ENSGT00950000182827.F #12 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00500000045016 Elephant MODERN SPECIES 2 FCHSD1 (ENSLAFG00000028321) RELL2 (ENSLAFG00000031336) ENSLAFG00000007960 DIAPH1 (ENSLAFG00000007578) PCDHGC5 (ENSLAFG00000004545) ENSLAFG00000001302 PCDHB3 (ENSLAFG00000008803) #29 PCDHB2 (ENSLAFG00000009131) PCDHB1 (ENSLAFG00000005554) #27 ENSLAFG00000014278 PCDHA3 (ENSLAFG00000001880) PCDHAC2 (ENSLAFG00000014281) #25 ENSLAFG00000021930 ZMAT2 (ENSLAFG00000018601) #23 HARS2 (ENSLAFG00000018600) #22 HARS1 (ENSLAFG00000008163) #21 DND1 (ENSLAFG00000008161) #20 WDR55 (ENSLAFG00000008159) #19 IK (ENSLAFG00000008152) #17 NDUFA2 (ENSLAFG00000013494) #18 TMCO6 (ENSLAFG00000013487) #16 ENSLAFG00000028921 #14 ENSLAFG00000031861 #14 ENSLAFG00000027299 SLC35A4 (ENSLAFG00000021736) #12 APBB3 (ENSLAFG00000005134) #11 SRA1 (ENSLAFG00000020802) #10 ANKHD1 (ENSLAFG00000005337) #9 SLC4A9 (ENSLAFG00000001329) #7 HBEGF (ENSLAFG00000008592) ENSLAFG00000008587 Hyrax MODERN SPECIES 5388 ZMAT2 (ENSPCAG00000001604) #23 HARS2 (ENSPCAG00000001548) #22 HARS1 (ENSPCAG00000001474) #21 DND1 (ENSPCAG00000001453) #20 WDR55 (ENSPCAG00000001427) #19 NDUFA2 (ENSPCAG00000001406) #18 TMCO6 (ENSPCAG00000001349) #16 IK (ENSPCAG00000001243) #17 Tenrec MODERN SPECIES 8879 ENSETEG00000005411 ENSETEG00000005406 #23 HARS2 (ENSETEG00000005403) #22 HARS1 (ENSETEG00000005399) #21 DND1 (ENSETEG00000005397) #20 WDR55 (ENSETEG00000005393) #19 ENSETEG00000005391 #18 IK (ENSETEG00000005388) #17 ENSETEG00000005385 #14 Marsupialia ANCESTRAL SPECIES 9 ENSGT00390000002137 ENSGT00940000155521 ENSGT00940000158869 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00940000160487 ENSGT00940000159910 ENSGT00970000196845 ENSGT00940000161193.k.b.b #29 ENSGT00940000160554 #25 ENSGT00390000008200 ENSGT00940000163564.k ENSGT00940000163564.l.b ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 Marsupialia_b ANCESTRAL SPECIES 21 ENSGT00940000161193.k.a.a.b.b #29 ENSGT00940000161193.k.a.a.a.a #29 ENSGT00940000161193.k.b.a.a.a.a.a #29 ENSGT00940000161193.k.b.a.a.a.b #29 ENSGT00940000161193.k.b.a.a.a.a.b #29 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00390000008200 ENSGT00940000163564.k.a ENSGT00940000163564.k.b.a ENSGT00940000163564.l.b ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786.j Diprotodontia ANCESTRAL SPECIES 57 ENSGT00940000161193.k.a.a.b.b #29 ENSGT00940000161193.k.a.a.a.a #29 ENSGT00940000161193.k.b.a.a.a.a.a #29 ENSGT00940000161193.k.b.a.a.a.b #29 ENSGT00940000161193.k.b.a.a.a.a.b #29 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00390000008200 ENSGT00940000163564.k.a ENSGT00940000163564.k.b.a ENSGT00940000163564.l.b ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786.j Diprotodontia_a ANCESTRAL SPECIES 54 ENSGT00940000163362 #36 ENSGT01090000260204.c ENSGT00940000161193.k.b.a.a.a.b.b #29 ENSGT00940000161193.k.b.a.a.a.a.a #29 ENSGT00940000161193.k.b.a.a.a.b.a #29 ENSGT00940000161193.k.b.a.a.a.a.b #29 ENSGT00940000163333 ENSGT00940000162745 #27 ENSGT00940000160554 #25 ENSGT00390000008200 ENSGT00940000163564.k.a ENSGT00940000163564.k.b.a ENSGT00940000163564.l.b ENSGT00390000010712 #23 ENSGT00390000005922.b.d.b.b #22 ENSGT00390000005922.b.d.b.a #21 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786.j Common wonbat MODERN SPECIES 261 ENSVURG00010016549 ZMAT2 (ENSVURG00010016562) #23 HARS2 (ENSVURG00010016608) #22 HARS1 (ENSVURG00010017310) #21 DND1 (ENSVURG00010017330) #20 WDR55 (ENSVURG00010017341) #19 IK (ENSVURG00010017348) #17 NDUFA2 (ENSVURG00010017358) #18 TMCO6 (ENSVURG00010017366) #16 ENSVURG00010017392 #14 SLC35A4 (ENSVURG00010017404) #12 ENSVURG00010017406 APBB3 (ENSVURG00010017413) #11 SRA1 (ENSVURG00010017436) #10 EIF4EBP3 (ENSVURG00010017444) koala MODERN SPECIES 107 ENSPCIG00000032902 #29 ENSPCIG00000034456 #29 ENSPCIG00000035294 #29 ENSPCIG00000032301 #29 ENSPCIG00000014786 ENSPCIG00000036469 #29 ENSPCIG00000035727 #29 ENSPCIG00000029854 #29 PCDHAC2 (ENSPCIG00000029848) #25 ENSPCIG00000031334 ENSPCIG00000034967 ENSPCIG00000032507 ENSPCIG00000021082 ZMAT2 (ENSPCIG00000021080) #23 HARS2 (ENSPCIG00000019291) #22 HARS1 (ENSPCIG00000017745) #21 DND1 (ENSPCIG00000017692) #20 WDR55 (ENSPCIG00000037308) #19 IK (ENSPCIG00000017488) #17 NDUFA2 (ENSPCIG00000017487) #18 TMCO6 (ENSPCIG00000017486) #16 ENSPCIG00000031240 #14 SLC35A4 (ENSPCIG00000017484) #12 ENSPCIG00000017483 APBB3 (ENSPCIG00000017478) #11 SRA1 (ENSPCIG00000017474) #10 EIF4EBP3 (ENSPCIG00000017473) ANKHD1 (ENSPCIG00000016104) #9 SLC4A9 (ENSPCIG00000016088) #7 HBEGF (ENSPCIG00000016081) ENSPCIG00000016076 Wallaby MODERN SPECIES 9258 ENSMEUG00000016420 #21 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000008675 #29 ENSSHAG00000022185 #29 ENSSHAG00000027052 #29 ENSSHAG00000027016 #29 ENSSHAG00000008137 #29 ENSSHAG00000031231 #29 ENSSHAG00000025105 #29 ENSSHAG00000025529 #29 PCDHB1 (ENSSHAG00000007367) #27 ENSSHAG00000021552 ENSSHAG00000025775 ENSSHAG00000028572 ENSSHAG00000032119 ENSSHAG00000031663 HARS2 (ENSSHAG00000016503) #22 HARS1 (ENSSHAG00000027068) #21 WDR55 (ENSSHAG00000022565) #19 IK (ENSSHAG00000016432) #17 NDUFA2 (ENSSHAG00000028938) #18 TMCO6 (ENSSHAG00000016414) #16 ENSSHAG00000016390 #14 SLC35A4 (ENSSHAG00000023193) #12 SRA1 (ENSSHAG00000016315) #10 APBB3 (ENSSHAG00000032009) #11 EIF4EBP3 (ENSSHAG00000022743) ANKHD1 (ENSSHAG00000016083) #9 SLC4A9 (ENSSHAG00000015856) #7 HBEGF (ENSSHAG00000015758) PFDN1 (ENSSHAG00000030589) ENSSHAG00000021280 PURA (ENSSHAG00000026534) Opossum MODERN SPECIES ENSMODG00000046879 #29 ENSMODG00000011065 #29 ENSMODG00000045287 #29 ENSMODG00000041649 #29 ENSMODG00000037965 #29 ENSMODG00000011237 #29 PCDHB1 (ENSMODG00000011214) #27 ENSMODG00000011254 ENSMODG00000048521 PCDHAC2 (ENSMODG00000029307) #25 ENSMODG00000042948 ENSMODG00000051024 ENSMODG00000038324 #23 ENSMODG00000043385 #23 HARS2 (ENSMODG00000011309) #22 HARS1 (ENSMODG00000011335) #21 DND1 (ENSMODG00000041629) #20 WDR55 (ENSMODG00000050628) #19 IK (ENSMODG00000011433) #17 NDUFA2 (ENSMODG00000011446) #18 TMCO6 (ENSMODG00000011453) #16 ENSMODG00000023773 #14 SLC35A4 (ENSMODG00000023774) #12 ENSMODG00000023775 APBB3 (ENSMODG00000011490) #11 EIF4EBP3 (ENSMODG00000042390) ANKHD1 (ENSMODG00000011596) #9 HBEGF (ENSMODG00000011701) PFDN1 (ENSMODG00000037252) ENSMODG00000041122 PURA (ENSMODG00000011723) Platypus MODERN SPECIES 85 ENSOANG00000007219 #29 ENSOANG00000047571 #29 ENSOANG00000038592 #29 PCDHB5 (ENSOANG00000047812) ENSOANG00000045109 #29 ENSOANG00000037213 #29 ENSOANG00000048806 #29 ENSOANG00000007217 ENSOANG00000043519 ENSOANG00000041964 ENSOANG00000037137 ENSOANG00000045567 ENSOANG00000043663 ZMAT2 (ENSOANG00000007213) #23 HARS2 (ENSOANG00000004587) #22 HARS1 (ENSOANG00000003035) #21 DND1 (ENSOANG00000037907) #20 WDR55 (ENSOANG00000037162) #19 ENSOANG00000042669 #17 ENSOANG00000011664 #18 TMCO6 (ENSOANG00000041061) #16 ENSOANG00000036493 #14 ENSOANG00000038540 APBB3 (ENSOANG00000020608) #11 SRA1 (ENSOANG00000046726) #10 ANKHD1 (ENSOANG00000001493) #9 SLC4A9 (ENSOANG00000037296) #7 ENSOANG00000045779 PFDN1 (ENSOANG00000050671) ENSOANG00000039497 PURA (ENSOANG00000043768) Mammalia ANCESTRAL SPECIES ENSGT00390000005922.b.d.a ##22 Theria ANCESTRAL SPECIES ENSGT00390000005922.b.d.a ##22 Eutheria ANCESTRAL SPECIES ENSGT00390000005922.b.d.a ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00390000005922.b.d.a ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000005922.b.d.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000005922.b.d.a ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00390000005922.b.d.a ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000005922.b.d.a ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000005922.b.d.a ##22 Pecora ANCESTRAL SPECIES ENSGT00390000005922.b.d.a ##22 Yarkand deer MODERN SPECIES 1234 ENSCHYG00000009582 ##22 Sauria ANCESTRAL SPECIES 17 ENSGT00940000156683.k.b.b ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000156683.k.a.a ENSGT00950000185420 ENSGT00940000161193 #29 ENSGT00940000163564 ENSGT01030000235101 ENSGT00390000008200 ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 Archelosauria ANCESTRAL SPECIES 15 ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000156683.k.a.a ENSGT00940000159725 ENSGT00940000156683.l ENSGT01090000260555 ENSGT00940000161193.e #29 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 Cryptodira ANCESTRAL SPECIES 15 ENSGT00940000159725 ENSGT00940000156683.k.a.a.d.a ENSGT00940000161193.e.d #29 ENSGT00940000161193.f #29 ENSGT00950000185420 ENSGT01090000260555 ENSGT00940000161193.e.c #29 ENSGT00940000160554 #25 ENSGT01030000235101 ENSGT00390000008200 ENSGT00940000163564 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Testudinoidea ANCESTRAL SPECIES 5 ENSGT00940000163777.a ENSGT00940000156683.k.a.b.a ENSGT00940000156683.k.a.a.c ENSGT00940000159725.g.a.b ENSGT00940000156683.k.a.a.d.a.b ENSGT01090000260555 ENSGT00940000161193.e.d #29 ENSGT00940000161193.e.c.a #29 ENSGT00940000160554 #25 ENSGT00980000199037 ENSGT00940000163564.c.b.b ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Emydidae ANCESTRAL SPECIES 11 ENSGT00940000165542 ENSGT00940000159910 ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000163777.a ENSGT00940000156683.k.a.b.a ENSGT00940000159725.g.a.b.a ENSGT00940000156683.k.a.a.d.a.b ENSGT00940000161193.e.c.a #29 ENSGT00940000160554 #25 ENSGT00980000199037 ENSGT00940000163564.c.b.b ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00990000210429 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Three-toed box turtle MODERN SPECIES 385 PCDHGC3 (ENSTMTG00000016602) ENSTMTG00000016620 ENSTMTG00000016652 ENSTMTG00000016682 ENSTMTG00000016865 ENSTMTG00000016915 ENSTMTG00000016927 ENSTMTG00000016942 #29 ENSTMTG00000016957 ENSTMTG00000016989 #29 PCDHAC2 (ENSTMTG00000017140) #25 ENSTMTG00000017732 ENSTMTG00000017742 ZMAT2 (ENSTMTG00000017755) #23 ENSTMTG00000017766 ##22 ENSTMTG00000017792 #22 DND1 (ENSTMTG00000017800) #20 ENSTMTG00000017817 WDR55 (ENSTMTG00000017827) #19 IK (ENSTMTG00000017875) #17 NDUFA2 (ENSTMTG00000018036) #18 TMCO6 (ENSTMTG00000018046) #16 ENSTMTG00000018073 #14 SLC35A4 (ENSTMTG00000018077) #12 ENSTMTG00000018086 APBB3 (ENSTMTG00000018101) #11 SRA1 (ENSTMTG00000018138) #10 ANKHD1 (ENSTMTG00000018252) #9 SLC4A9 (ENSTMTG00000019564) #7 HBEGF (ENSTMTG00000019604) ENSTMTG00000019614 Chinese turtle MODERN SPECIES 2028 ENSPSIG00000003788 #29 ENSPSIG00000003792 ENSPSIG00000001281 ENSPSIG00000001299 ZMAT2 (ENSPSIG00000003832) #23 ENSPSIG00000003835 #22 Archosauria ANCESTRAL SPECIES 46 ENSGT00940000163777.a ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000156683.k.a.a ENSGT00940000156683.l ENSGT00940000159725 ENSGT00940000161193.e #29 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00980000198828.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674 ENSGT00940000158778 Aves ANCESTRAL SPECIES 15 ENSGT00940000156683.l.c.a ENSGT00940000159725 ENSGT00940000156683.l.c.b ENSGT00940000161193.e.b #29 ENSGT01090000260555 ENSGT00940000161193.e.a #29 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT01030000235101 ENSGT00940000163564 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674 ENSGT00940000158778 Neognathae ANCESTRAL SPECIES 14 ENSGT00940000159725.e.a ENSGT00940000161193.e.b #29 ENSGT01090000260555 ENSGT00940000161193.e.a.a #29 ENSGT00940000165142 ENSGT00940000161193.e.a.b #29 ENSGT00940000160554 #25 ENSGT00940000163564.a ENSGT01030000235101 ENSGT00940000163564.b.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674 ENSGT00940000158778 Galloanserae ANCESTRAL SPECIES 14 ENSGT00940000161193.e.b #29 ENSGT00940000156683.l.d.a.b ENSGT00940000156683.l.d.a.a ENSGT01040000241462 ENSGT00940000165142 ENSGT00940000161193.e.a.b #29 ENSGT00940000160554 #25 ENSGT00980000198828.a ENSGT01030000235101 ENSGT00940000163564.b.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674 ENSGT00940000158778 ENSGT00950000183162.a.a Anatidae ANCESTRAL SPECIES 15 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674.c ENSGT00940000158778 ENSGT00950000183162.a.a ENSGT00940000165340 ENSGT00390000009786 Pink-footed goose MODERN SPECIES 9 ENSABRG00000014176 ZMAT2 (ENSABRG00000014185) #23 ENSABRG00000014197 ##22 ENSABRG00000014205 ENSABRG00000014208 #22 DND1 (ENSABRG00000014212) #20 WDR55 (ENSABRG00000014221) #19 IK (ENSABRG00000014224) #17 NDUFA2 (ENSABRG00000014237) #18 TMCO6 (ENSABRG00000014248) #16 ENSABRG00000014280 #14 SLC35A4 (ENSABRG00000014284) #12 STING1 (ENSABRG00000014298) UBE2D2 (ENSABRG00000014309) CXXC5 (ENSABRG00000014324) PSD2 (ENSABRG00000014335) NRG2 (ENSABRG00000014354) PURA (ENSABRG00000014361) ENSABRG00000014366 PFDN1 (ENSABRG00000014368) Lepidosauria ANCESTRAL SPECIES 37 ENSGT00940000156683.k.a.a ENSGT00940000159725 ENSGT00940000156683.k.b.a ENSGT00940000161193 #29 ENSGT00950000185420 ENSGT00940000160554 #25 ENSGT00940000163564 ENSGT01030000235101 ENSGT00390000008200 ENSGT00940000165142 ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 Episquamata ANCESTRAL SPECIES ENSGT00390000005922.b.d #22 Toxicofera ANCESTRAL SPECIES ENSGT00390000005922.b.d #22 Elapidae ANCESTRAL SPECIES ENSGT00390000005922.b.d #22 Elapidae_a ANCESTRAL SPECIES ENSGT00390000005922.b.d #22 Blue-lipped sea krait MODERN SPECIES 8931 ENSLLTG00000008084 #22 tuatara MODERN SPECIES 1138 ENSSPUG00000016730 ENSSPUG00000016764 ENSSPUG00000016796 ENSSPUG00000016832 ENSSPUG00000016890 ENSSPUG00000016931 ENSSPUG00000016947 ENSSPUG00000017001 ENSSPUG00000017005 ENSSPUG00000017025 ENSSPUG00000017049 ENSSPUG00000000027 ENSSPUG00000000239 ZMAT2 (ENSSPUG00000000256) #23 ENSSPUG00000000266 ##22 ENSSPUG00000000279 #22 DND1 (ENSSPUG00000000311) #20 ENSSPUG00000000339 Anura ANCESTRAL SPECIES 199 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00390000005922.b.c.b ##22 ENSGT00390000010712 #23 ENSGT00940000163777.b.f ENSGT00940000163564.o.a ENSGT00940000163564.o.b ENSGT00940000163777.b.e.a ENSGT00940000160554 #25 ENSGT00940000156683.e.a.b.a ENSGT00940000156683.e.a.a ENSGT00940000162232.b.a.a.b.a ENSGT00940000156683.e.b ENSGT00940000162232.b.a.b ENSGT00940000159910 ENSGT00940000160487 Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000007372 ENSLLEG00000007360 ENSLLEG00000007282 ENSLLEG00000007261 ENSLLEG00000007247 ENSLLEG00000007124 ENSLLEG00000007066 ENSLLEG00000007021 PCDHAC2 (ENSLLEG00000006977) #25 ENSLLEG00000006913 ENSLLEG00000006699 ENSLLEG00000006572 ENSLLEG00000006539 ZMAT2 (ENSLLEG00000006457) #23 ENSLLEG00000006389 ##22 ENSLLEG00000006256 #22 ENSLLEG00000006215 #20 ENSLLEG00000006162 #20 ENSLLEG00000006152 ENSLLEG00000006094 WDR55 (ENSLLEG00000006054) #19 IK (ENSLLEG00000005816) #17 NDUFA2 (ENSLLEG00000005761) #18 TMCO6 (ENSLLEG00000005652) #16 ENSLLEG00000005627 #14 C1QTNF2 (ENSLLEG00000005616) SRA1 (ENSLLEG00000005438) #10 ENSLLEG00000005277 #11 SLC35A4 (ENSLLEG00000005255) #12 ENSLLEG00000005238 ENSLLEG00000005197 Frog MODERN SPECIES 3 FAM180A (ENSXETG00000010609) mtpn (ENSXETG00000042873) ENSXETG00000045305 ENSXETG00000035762 chrm2 (ENSXETG00000049444) ptn (ENSXETG00000032857) dgki (ENSXETG00000021398) CREB3L2 (ENSXETG00000033093) ssbp1 (ENSXETG00000020197) wee2 (ENSXETG00000031988) DENND11 (ENSXETG00000048620) agk (ENSXETG00000047267) ENSXETG00000037587 tmem178b (ENSXETG00000039625) braf (ENSXETG00000004845) hars2 (ENSXETG00000002665) #22 ENSXETG00000031320 ndufb2 (ENSXETG00000002668) ENSXETG00000005438 adck2 (ENSXETG00000031357) dennd2a (ENSXETG00000049354) ENSXETG00000037869 mkrn1 (ENSXETG00000027117) rab19 (ENSXETG00000002673) slc37a3 (ENSXETG00000002672) kdm7a (ENSXETG00000002669) ENSXETG00000042741 sinhcaf (ENSXETG00000047885) dennd5b (ENSXETG00000002680) etfbkmt (ENSXETG00000037887) amn1 (ENSXETG00000044721) Tetrapoda DUPLICATION Tetrapoda ANCESTRAL SPECIES ENSGT00390000005922.b.c.a ##22 Amniota ANCESTRAL SPECIES ENSGT00390000005922.b.c.a ##22 Sauria ANCESTRAL SPECIES 17 ENSGT00940000159725 ENSGT00940000156683.k.b.a ENSGT00940000156683.k.b.b ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000156683.k.a.a ENSGT00950000185420 ENSGT00940000161193 #29 ENSGT00940000163564 ENSGT01030000235101 ENSGT00390000008200 ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 Archelosauria ANCESTRAL SPECIES 15 ENSGT00940000159910 ENSGT00940000163777.a ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000156683.k.a.a ENSGT00940000159725 ENSGT00940000156683.l ENSGT01090000260555 ENSGT00940000161193.e #29 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 Cryptodira ANCESTRAL SPECIES 15 ENSGT00940000156683.l ENSGT00940000159725 ENSGT00940000156683.k.a.a.d.a ENSGT00940000161193.e.d #29 ENSGT00940000161193.f #29 ENSGT00950000185420 ENSGT01090000260555 ENSGT00940000161193.e.c #29 ENSGT00940000160554 #25 ENSGT01030000235101 ENSGT00390000008200 ENSGT00940000163564 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 Testudinoidea ANCESTRAL SPECIES 5 ENSGT00940000164266 ENSGT00940000163777.a ENSGT00940000156683.k.a.b.a ENSGT00940000156683.k.a.a.c ENSGT00940000159725.g.a.b ENSGT00940000156683.k.a.a.d.a.b ENSGT01090000260555 ENSGT00940000161193.e.d #29 ENSGT00940000161193.e.c.a #29 ENSGT00940000160554 #25 ENSGT00980000199037 ENSGT00940000163564.c.b.b ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 Emydidae ANCESTRAL SPECIES ENSGT00390000005922.b.c.a ##22 painted turtle MODERN SPECIES 739 ENSCPBG00000007826 ENSCPBG00000007821 ENSCPBG00000007810 ENSCPBG00000007803 ENSCPBG00000007798 PCDHAC2 (ENSCPBG00000007788) #25 ENSCPBG00000007776 ENSCPBG00000007757 ENSCPBG00000007747 ENSCPBG00000007736 ENSCPBG00000007730 ENSCPBG00000007724 ZMAT2 (ENSCPBG00000007718) #23 ENSCPBG00000007708 ##22 ENSCPBG00000007702 ENSCPBG00000007696 ##22 DND1 (ENSCPBG00000007689) #20 ENSCPBG00000007683 WDR55 (ENSCPBG00000007678) #19 IK (ENSCPBG00000007657) #17 NDUFA2 (ENSCPBG00000007654) #18 TMCO6 (ENSCPBG00000007651) #16 ENSCPBG00000007645 #14 SLC35A4 (ENSCPBG00000007626) #12 ENSCPBG00000007616 APBB3 (ENSCPBG00000007598) #11 SRA1 (ENSCPBG00000007590) #10 EIF4EBP3 (ENSCPBG00000007581) ANKHD1 (ENSCPBG00000007377) #9 SLC4A9 (ENSCPBG00000006627) #7 HBEGF (ENSCPBG00000006559) Testudinidae ANCESTRAL SPECIES 16 ENSGT00940000156683.k.a.a.d.b ENSGT00940000156683.k.a.a.c ENSGT00940000159725.g.a.b ENSGT01090000260555 ENSGT00940000161193.e.d #29 ENSGT00940000161193.f.b #29 ENSGT00950000185420.b ENSGT00940000161193.f.a.a #29 ENSGT00950000185420.a ENSGT01100000264097 ENSGT00940000160554 #25 ENSGT00940000163564.c.a.b.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Abingdon island giant tortoise MODERN SPECIES 2197 ENSCABG00000018876 ENSCABG00000018878 ENSCABG00000018879 ENSCABG00000018880 ENSCABG00000018881 ENSCABG00000018882 ENSCABG00000018883 ENSCABG00000018884 ENSCABG00000018885 ENSCABG00000018900 ENSCABG00000018902 ENSCABG00000018905 ENSCABG00000018910 ZMAT2 (ENSCABG00000018912) #23 ENSCABG00000018915 ##22 ENSCABG00000018918 ##22 DND1 (ENSCABG00000018920) #20 WDR55 (ENSCABG00000018921) #19 ENSCABG00000018925 IK (ENSCABG00000018929) #17 NDUFA2 (ENSCABG00000018934) #18 TMCO6 (ENSCABG00000018938) #16 ENSCABG00000018941 #14 SLC35A4 (ENSCABG00000018943) #12 ENSCABG00000018952 APBB3 (ENSCABG00000018955) #11 SRA1 (ENSCABG00000018965) #10 EIF4EBP3 (ENSCABG00000018968) ANKHD1 (ENSCABG00000019023) #9 SLC4A9 (ENSCABG00000019325) #7 HBEGF (ENSCABG00000019335) Chinese turtle MODERN SPECIES 1570 ENSPSIG00000004218 ##22 IK (ENSPSIG00000007179) #17 TMCO6 (ENSPSIG00000013434) #16 Archosauria ANCESTRAL SPECIES 46 ENSGT00940000160487 ENSGT00940000159910 ENSGT00940000163777.a ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000156683.k.a.a ENSGT00940000156683.l ENSGT00940000159725 ENSGT00940000161193.e #29 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00980000198828.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a Australian saltwater crocodile MODERN SPECIES 34 PCDHAC2 (ENSCPRG00005000452) #25 ENSCPRG00005000625 PCDHAC1 (ENSCPRG00005000632) ENSCPRG00005000673 ENSCPRG00005000723 ENSCPRG00005000812 ZMAT2 (ENSCPRG00005000820) #23 ENSCPRG00005000822 ##22 ENSCPRG00005000827 ##22 DND1 (ENSCPRG00005000831) #20 ENSCPRG00005000845 WDR55 (ENSCPRG00005000864) #19 IK (ENSCPRG00005000912) #17 NDUFA2 (ENSCPRG00005000921) #18 TMCO6 (ENSCPRG00005000926) #16 PSD2 (ENSCPRG00005000956) ENSCPRG00005000969 ENSCPRG00005000983 PURA (ENSCPRG00005000988) ENSCPRG00005001011 PFDN1 (ENSCPRG00005001017) HBEGF (ENSCPRG00005001024) SLC4A9 (ENSCPRG00005001036) #7 ANKHD1 (ENSCPRG00005001236) #9 Lepidosauria ANCESTRAL SPECIES 37 ENSGT00940000164266 ENSGT00940000156683.k.a.a ENSGT00940000159725 ENSGT00940000156683.k.b.a ENSGT00940000161193 #29 ENSGT00950000185420 ENSGT00940000160554 #25 ENSGT00940000163564 ENSGT01030000235101 ENSGT00390000008200 ENSGT00940000165142 ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 Episquamata ANCESTRAL SPECIES 1 ENSGT00940000156683.k.b.a ENSGT00940000159725.d.b.a ENSGT00940000156683.k.b.b.a.a ENSGT00940000156683.k.b.b.a.b ENSGT00940000159725.d.a.b ENSGT00940000161193.a #29 ENSGT00940000159725.d.b.b.a ENSGT00940000159725.d.a.a ENSGT00940000161193.b #29 ENSGT00940000160554 #25 ENSGT00940000163564.h.a ENSGT00940000163564.g.b.b ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 Laterata ANCESTRAL SPECIES 5 ENSGT00940000156683.k.b.b.a.b ENSGT00940000159725.d.a.b ENSGT00940000161193.a #29 ENSGT00940000163564.g.b.b.b ENSGT00940000159725.d.a.a ENSGT00940000161193.b #29 ENSGT00940000160554 #25 ENSGT00940000163564.h.a.a ENSGT00940000163564.h.b ENSGT00940000163564.g.a ENSGT00940000163564.g.b.b.a ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Argentine black and white tegu MODERN SPECIES 36 ENSSMRG00000019048 ENSSMRG00000019047 ENSSMRG00000019046 ENSSMRG00000019045 #29 ENSSMRG00000019044 #29 ENSSMRG00000019043 #29 ENSSMRG00000019042 ENSSMRG00000019041 PCDHAC2 (ENSSMRG00000019040) #25 ENSSMRG00000019039 ENSSMRG00000019037 ENSSMRG00000019036 ENSSMRG00000019035 ZMAT2 (ENSSMRG00000019034) #23 ENSSMRG00000019033 ##22 ENSSMRG00000019032 ##22 DND1 (ENSSMRG00000019031) #20 WDR55 (ENSSMRG00000019030) #19 NDUFA2 (ENSSMRG00000019029) #18 ENSSMRG00000019028 SLC35A4 (ENSSMRG00000019027) #12 ENSSMRG00000019026 APBB3 (ENSSMRG00000019025) #11 SRA1 (ENSSMRG00000019024) #10 ANKHD1 (ENSSMRG00000018661) #9 SLC4A9 (ENSSMRG00000018652) #7 HBEGF (ENSSMRG00000018650) PFDN1 (ENSSMRG00000018649) ENSSMRG00000018648 PURA (ENSSMRG00000018647) NRG2 (ENSSMRG00000018642) Common wall lizard MODERN SPECIES 15 ENSPMRG00000008115 #29 ENSPMRG00000008128 #29 ENSPMRG00000008132 #29 ENSPMRG00000008192 ENSPMRG00000008230 ENSPMRG00000008302 ENSPMRG00000008313 ENSPMRG00000008320 ENSPMRG00000008329 ENSPMRG00000008344 ENSPMRG00000008355 ENSPMRG00000008368 ENSPMRG00000008376 ZMAT2 (ENSPMRG00000008382) #23 ENSPMRG00000008400 ##22 ENSPMRG00000008433 ##22 DND1 (ENSPMRG00000008511) #20 IK (ENSPMRG00000008584) #17 NDUFA2 (ENSPMRG00000008790) #18 TMCO6 (ENSPMRG00000008797) #16 ENSPMRG00000008804 ENSPMRG00000008810 #14 SLC35A4 (ENSPMRG00000008812) #12 ENSPMRG00000008817 APBB3 (ENSPMRG00000008830) #11 SRA1 (ENSPMRG00000008858) #10 ANKHD1 (ENSPMRG00000009470) #9 SLC4A9 (ENSPMRG00000012396) #7 HBEGF (ENSPMRG00000012412) PFDN1 (ENSPMRG00000012416) PURA (ENSPMRG00000012427) Toxicofera ANCESTRAL SPECIES 1 ENSGT00940000159725.d.b.b.b ENSGT00940000156683.k.b.a ENSGT00940000159725.d.b.b.a ENSGT00940000159725.d.a.a ENSGT00940000161193.b #29 ENSGT00940000160554 #25 ENSGT00940000161193.a #29 ENSGT00940000163564.g.b.a.a ENSGT01030000235101 ENSGT00940000163564.g.b.a.b ENSGT00940000163564.h.b ENSGT00940000163564.g.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Elapidae ANCESTRAL SPECIES 8 ENSGT00940000156683.k.b.b.a.a.c.a.a ENSGT00940000156683.k.b.b.a.a.c.a.b ENSGT00940000156683.k.b.b.a.b.c.a ENSGT00940000159725.d.b.b.b.d ENSGT00940000156683.k.b.a.e.b ENSGT00940000159725.d.b.b.b.c ENSGT00940000156683.k.b.a.e.a ENSGT00940000159725.c ENSGT00940000161193.b.h #29 ENSGT00940000161193.a.c.b #29 ENSGT00940000163564.g.b.a.a.b.a.a.b.a ENSGT00940000163564.g.b.a.a.a.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000165340 ENSGT00950000183162.a.a Indian cobra MODERN SPECIES 2 ENSNNAG00000005982 #29 ENSNNAG00000006004 #29 ENSNNAG00000006036 PCDHAC1 (ENSNNAG00000006084) ENSNNAG00000006100 ENSNNAG00000006110 ENSNNAG00000006126 ENSNNAG00000006134 ENSNNAG00000006146 ENSNNAG00000006168 ENSNNAG00000006313 ENSNNAG00000006328 ENSNNAG00000006343 ZMAT2 (ENSNNAG00000006363) #23 ENSNNAG00000006368 ##22 ENSNNAG00000006388 ##22 DND1 (ENSNNAG00000006412) #20 WDR55 (ENSNNAG00000006438) #19 IK (ENSNNAG00000006458) #17 NDUFA2 (ENSNNAG00000006480) #18 TMCO6 (ENSNNAG00000006492) #16 ENSNNAG00000006514 APBB3 (ENSNNAG00000006528) #11 ENSNNAG00000006566 #10 ANKHD1 (ENSNNAG00000006769) #9 SLC4A9 (ENSNNAG00000009021) #7 HBEGF (ENSNNAG00000009351) ENSNNAG00000009394 PURA (ENSNNAG00000009426) ENSNNAG00000009430 ENSNNAG00000009477 Elapidae_a ANCESTRAL SPECIES 35 ENSGT00940000163564.g.b.a.a.b.a.a.b.a ENSGT00940000163564.g.b.a.a.a.a ENSGT00990000214303 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000165340 ENSGT00950000183162.a.a Acanthophiinae ANCESTRAL SPECIES 35 ENSGT00940000163564.g.b.a.a.b.a.a.b.a ENSGT00940000163564.g.b.a.a.a.a ENSGT00990000214303 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000165340 ENSGT00950000183162.a.a Mainland tiger snake MODERN SPECIES 45 ENSNSUG00000012414 ENSNSUG00000012412 ENSNSUG00000012411 ENSNSUG00000012410 ZMAT2 (ENSNSUG00000012409) #23 ENSNSUG00000012408 ##22 ENSNSUG00000012407 ##22 DND1 (ENSNSUG00000012406) #20 WDR55 (ENSNSUG00000012405) #19 ENSNSUG00000012404 IK (ENSNSUG00000012170) #17 NDUFA2 (ENSNSUG00000012168) #18 TMCO6 (ENSNSUG00000012103) #16 ENSNSUG00000012101 ENSNSUG00000012100 #11 ENSNSUG00000012099 #11 SRA1 (ENSNSUG00000012098) #10 ANKHD1 (ENSNSUG00000010898) #9 SLC4A9 (ENSNSUG00000010884) #7 HBEGF (ENSNSUG00000010883) PFDN1 (ENSNSUG00000010882) ENSNSUG00000010881 Eastern brown snake MODERN SPECIES 15 ENSPTXG00000005006 #29 PCDHAC1 (ENSPTXG00000005010) ENSPTXG00000005130 ENSPTXG00000005131 ENSPTXG00000005132 ENSPTXG00000005133 ENSPTXG00000002839 ENSPTXG00000002840 ENSPTXG00000002841 ENSPTXG00000002843 ENSPTXG00000002844 ENSPTXG00000002845 ENSPTXG00000002848 ZMAT2 (ENSPTXG00000002851) #23 ENSPTXG00000002853 ##22 ENSPTXG00000002856 ##22 DND1 (ENSPTXG00000002857) #20 WDR55 (ENSPTXG00000002858) #19 IK (ENSPTXG00000002939) #17 NDUFA2 (ENSPTXG00000002943) #18 TMCO6 (ENSPTXG00000002945) #16 ENSPTXG00000002947 ENSPTXG00000002950 #11 SRA1 (ENSPTXG00000002952) #10 ANKHD1 (ENSPTXG00000002988) #9 SLC4A9 (ENSPTXG00000003327) #7 HBEGF (ENSPTXG00000003338) PFDN1 (ENSPTXG00000003339) PURA (ENSPTXG00000003343) ENSPTXG00000003344 ENSPTXG00000003346 Blue-lipped sea krait MODERN SPECIES 3686 ENSLLTG00000007295 ##22 Lizard MODERN SPECIES 3 ENSACAG00000038653 #29 ENSACAG00000040218 #29 ENSACAG00000044665 ENSACAG00000040781 #29 PCDHAC2 (ENSACAG00000038077) #25 ENSACAG00000028111 ENSACAG00000035663 ENSACAG00000037963 ENSACAG00000024094 ENSACAG00000045172 ENSACAG00000025348 ENSACAG00000022341 ENSACAG00000012745 ZMAT2 (ENSACAG00000042409) #23 ENSACAG00000035995 ##22 ENSACAG00000012768 ##22 ENSACAG00000012923 #14 ENSACAG00000012925 #20 WDR55 (ENSACAG00000035929) #19 IK (ENSACAG00000012937) #17 NDUFA2 (ENSACAG00000012978) #18 TMCO6 (ENSACAG00000012987) #16 ENSACAG00000013008 #14 ENSACAG00000038086 SLC35A4 (ENSACAG00000013009) #12 ENSACAG00000035509 APBB3 (ENSACAG00000013016) #11 SRA1 (ENSACAG00000013148) #10 ANKHD1 (ENSACAG00000013168) #9 SLC4A9 (ENSACAG00000013391) #7 HBEGF (ENSACAG00000041727) Tetrapoda ANCESTRAL SPECIES 27 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00940000165542 ENSGT00940000160487 ENSGT00940000159910 ENSGT00940000163777.a ENSGT00940000156683 ENSGT00940000162232 ENSGT00940000159725 ENSGT00940000160554 #25 ENSGT00940000163777.b.e.a ENSGT00940000163564 ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00940000159225 #20 ENSGT00390000005922.b.d #22 ENSGT00990000205617 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 Anura ANCESTRAL SPECIES 199 ENSGT00940000160487 ENSGT00940000159910 ENSGT00940000162232.b.a.b ENSGT00940000156683.e.b ENSGT00940000162232.b.a.a.b.a ENSGT00940000156683.e.a.a ENSGT00940000156683.e.a.b.a ENSGT00940000160554 #25 ENSGT00940000163777.b.e.a ENSGT00940000163564.o.b ENSGT00940000163564.o.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00940000159225 #20 ENSGT00390000005922.b.d #22 Frog MODERN SPECIES 3 ENSXETG00000027152 ENSXETG00000037918 pcdhac2 (ENSXETG00000041650) #25 ENSXETG00000040894 ENSXETG00000038690 ENSXETG00000038724 ENSXETG00000046794 ENSXETG00000039933 pcdha8 (ENSXETG00000016123) ENSXETG00000041145 pcdha6 (ENSXETG00000042368) ENSXETG00000039250 ENSXETG00000048768 pcdha13 (ENSXETG00000016119) zmat2 (ENSXETG00000043013) #23 hars1 (ENSXETG00000016115) ##22 dnd1 (ENSXETG00000016114) #20 c5orf15 (ENSXETG00000036433) ENSXETG00000047991 ENSXETG00000043979 hsd17b1 (ENSXETG00000016096) skp1 (ENSXETG00000016095) tcf7 (ENSXETG00000016100) ppp2ca (ENSXETG00000016092) ube2b (ENSXETG00000026236) cdkn2aipnl (ENSXETG00000016090) sting1 (ENSXETG00000016088) jade2 (ENSXETG00000010410) sar1b (ENSXETG00000010408) sco2 (ENSXETG00000010407) camlg (ENSXETG00000010406) Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000007379 ENSLLEG00000007372 ENSLLEG00000007360 ENSLLEG00000007282 ENSLLEG00000007261 ENSLLEG00000007247 ENSLLEG00000007124 ENSLLEG00000007066 ENSLLEG00000007021 PCDHAC2 (ENSLLEG00000006977) #25 ENSLLEG00000006913 ENSLLEG00000006699 ENSLLEG00000006572 ENSLLEG00000006539 ZMAT2 (ENSLLEG00000006457) #23 ENSLLEG00000006389 ##22 ENSLLEG00000006256 #22 ENSLLEG00000006215 #20 ENSLLEG00000006162 #20 ENSLLEG00000006152 ENSLLEG00000006094 WDR55 (ENSLLEG00000006054) #19 IK (ENSLLEG00000005816) #17 NDUFA2 (ENSLLEG00000005761) #18 TMCO6 (ENSLLEG00000005652) #16 ENSLLEG00000005627 #14 C1QTNF2 (ENSLLEG00000005616) SRA1 (ENSLLEG00000005438) #10 ENSLLEG00000005277 #11 SLC35A4 (ENSLLEG00000005255) #12 ENSLLEG00000005238 Amniota ANCESTRAL SPECIES 17 ENSGT00940000160487 ENSGT00940000159910 ENSGT00940000163777.a ENSGT00940000156683 ENSGT01040000241462 ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000159725 ENSGT00940000161193 #29 ENSGT00940000160554 #25 ENSGT00940000163564 ENSGT00390000008200 ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A Sauria ANCESTRAL SPECIES 17 ENSGT00940000156683.l ENSGT00940000159725 ENSGT00940000156683.k.b.a ENSGT00940000156683.k.b.b ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000156683.k.a.a ENSGT00950000185420 ENSGT00940000161193 #29 ENSGT00940000163564 ENSGT01030000235101 ENSGT00390000008200 ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 Archelosauria ANCESTRAL SPECIES 15 ENSGT00940000160487 ENSGT00940000159910 ENSGT00940000163777.a ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000156683.k.a.a ENSGT00940000159725 ENSGT00940000156683.l ENSGT01090000260555 ENSGT00940000161193.e #29 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 Cryptodira ANCESTRAL SPECIES 15 ENSGT00940000162232 ENSGT00940000156683.l ENSGT00940000159725 ENSGT00940000156683.k.a.a.d.a ENSGT00940000161193.e.d #29 ENSGT00940000161193.f #29 ENSGT00950000185420 ENSGT01090000260555 ENSGT00940000161193.e.c #29 ENSGT00940000160554 #25 ENSGT01030000235101 ENSGT00390000008200 ENSGT00940000163564 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 Testudinoidea ANCESTRAL SPECIES 5 ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000163777.a ENSGT00940000156683.k.a.b.a ENSGT00940000156683.k.a.a.c ENSGT00940000159725.g.a.b ENSGT00940000156683.k.a.a.d.a.b ENSGT01090000260555 ENSGT00940000161193.e.d #29 ENSGT00940000161193.e.c.a #29 ENSGT00940000160554 #25 ENSGT00980000199037 ENSGT00940000163564.c.b.b ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 Emydidae ANCESTRAL SPECIES 11 ENSGT00940000160487 ENSGT00940000165542 ENSGT00940000159910 ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000163777.a ENSGT00940000156683.k.a.b.a ENSGT00940000159725.g.a.b.a ENSGT00940000156683.k.a.a.d.a.b ENSGT00940000161193.e.c.a #29 ENSGT00940000160554 #25 ENSGT00980000199037 ENSGT00940000163564.c.b.b ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00990000210429 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 Three-toed box turtle MODERN SPECIES 385 DIAPH1 (ENSTMTG00000015723) PCDHGC3 (ENSTMTG00000016602) ENSTMTG00000016620 ENSTMTG00000016652 ENSTMTG00000016682 ENSTMTG00000016865 ENSTMTG00000016915 ENSTMTG00000016927 ENSTMTG00000016942 #29 ENSTMTG00000016957 ENSTMTG00000016989 #29 PCDHAC2 (ENSTMTG00000017140) #25 ENSTMTG00000017732 ENSTMTG00000017742 ZMAT2 (ENSTMTG00000017755) #23 ENSTMTG00000017766 ##22 ENSTMTG00000017792 #22 DND1 (ENSTMTG00000017800) #20 ENSTMTG00000017817 WDR55 (ENSTMTG00000017827) #19 IK (ENSTMTG00000017875) #17 NDUFA2 (ENSTMTG00000018036) #18 TMCO6 (ENSTMTG00000018046) #16 ENSTMTG00000018073 #14 SLC35A4 (ENSTMTG00000018077) #12 ENSTMTG00000018086 APBB3 (ENSTMTG00000018101) #11 SRA1 (ENSTMTG00000018138) #10 ANKHD1 (ENSTMTG00000018252) #9 SLC4A9 (ENSTMTG00000019564) #7 HBEGF (ENSTMTG00000019604) painted turtle MODERN SPECIES 739 ENSCPBG00000007845 #29 ENSCPBG00000007840 ENSCPBG00000007826 ENSCPBG00000007821 ENSCPBG00000007810 ENSCPBG00000007803 ENSCPBG00000007798 PCDHAC2 (ENSCPBG00000007788) #25 ENSCPBG00000007776 ENSCPBG00000007757 ENSCPBG00000007747 ENSCPBG00000007736 ENSCPBG00000007730 ENSCPBG00000007724 ZMAT2 (ENSCPBG00000007718) #23 ENSCPBG00000007708 ##22 ENSCPBG00000007702 ENSCPBG00000007696 ##22 DND1 (ENSCPBG00000007689) #20 ENSCPBG00000007683 WDR55 (ENSCPBG00000007678) #19 IK (ENSCPBG00000007657) #17 NDUFA2 (ENSCPBG00000007654) #18 TMCO6 (ENSCPBG00000007651) #16 ENSCPBG00000007645 #14 SLC35A4 (ENSCPBG00000007626) #12 ENSCPBG00000007616 APBB3 (ENSCPBG00000007598) #11 SRA1 (ENSCPBG00000007590) #10 EIF4EBP3 (ENSCPBG00000007581) ANKHD1 (ENSCPBG00000007377) #9 Testudinidae ANCESTRAL SPECIES 16 ENSGT00940000159725.g.a.a ENSGT00940000156683.k.a.a.d.b ENSGT00940000156683.k.a.a.c ENSGT00940000159725.g.a.b ENSGT01090000260555 ENSGT00940000161193.e.d #29 ENSGT00940000161193.f.b #29 ENSGT00950000185420.b ENSGT00940000161193.f.a.a #29 ENSGT00950000185420.a ENSGT01100000264097 ENSGT00940000160554 #25 ENSGT00940000163564.c.a.b.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000163328 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 Goode s thornscrub tortoise MODERN SPECIES 22 ENSGEVG00005017698 #29 ENSGEVG00005017646 #29 ENSGEVG00005017637 ENSGEVG00005017621 #29 ENSGEVG00005017606 #29 ENSGEVG00005017591 PCDHAC2 (ENSGEVG00005017575) #25 ENSGEVG00005017546 ENSGEVG00005017529 ENSGEVG00005017510 ENSGEVG00005017486 ENSGEVG00005017447 ENSGEVG00005017429 ENSGEVG00005017356 ZMAT2 (ENSGEVG00005017324) #23 ENSGEVG00005017128 ##22 DND1 (ENSGEVG00005017027) #20 WDR55 (ENSGEVG00005016998) #19 IK (ENSGEVG00005016907) #17 NDUFA2 (ENSGEVG00005016878) #18 TMCO6 (ENSGEVG00005016844) #16 ENSGEVG00005016827 #14 SLC35A4 (ENSGEVG00005016793) #12 ENSGEVG00005016777 APBB3 (ENSGEVG00005016623) #11 SRA1 (ENSGEVG00005016589) #10 EIF4EBP3 (ENSGEVG00005016577) ANKHD1 (ENSGEVG00005007715) #9 SLC4A9 (ENSGEVG00005005749) #7 HBEGF (ENSGEVG00005005517) PFDN1 (ENSGEVG00005005492) Abingdon island giant tortoise MODERN SPECIES 2197 ENSCABG00000018875 ENSCABG00000018876 ENSCABG00000018878 ENSCABG00000018879 ENSCABG00000018880 ENSCABG00000018881 ENSCABG00000018882 ENSCABG00000018883 ENSCABG00000018884 ENSCABG00000018885 ENSCABG00000018900 ENSCABG00000018902 ENSCABG00000018905 ENSCABG00000018910 ZMAT2 (ENSCABG00000018912) #23 ENSCABG00000018915 ##22 ENSCABG00000018918 ##22 DND1 (ENSCABG00000018920) #20 WDR55 (ENSCABG00000018921) #19 ENSCABG00000018925 IK (ENSCABG00000018929) #17 NDUFA2 (ENSCABG00000018934) #18 TMCO6 (ENSCABG00000018938) #16 ENSCABG00000018941 #14 SLC35A4 (ENSCABG00000018943) #12 ENSCABG00000018952 APBB3 (ENSCABG00000018955) #11 SRA1 (ENSCABG00000018965) #10 EIF4EBP3 (ENSCABG00000018968) ANKHD1 (ENSCABG00000019023) #9 SLC4A9 (ENSCABG00000019325) #7 Archosauria ANCESTRAL SPECIES 46 ENSGT00940000160541 ENSGT00940000160487 ENSGT00940000159910 ENSGT00940000163777.a ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000156683.k.a.a ENSGT00940000156683.l ENSGT00940000159725 ENSGT00940000161193.e #29 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00980000198828.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a Australian saltwater crocodile MODERN SPECIES 34 PCDHAC2 (ENSCPRG00005000452) #25 ENSCPRG00005000625 PCDHAC1 (ENSCPRG00005000632) ENSCPRG00005000673 ENSCPRG00005000723 ENSCPRG00005000812 ZMAT2 (ENSCPRG00005000820) #23 ENSCPRG00005000822 ##22 ENSCPRG00005000827 ##22 DND1 (ENSCPRG00005000831) #20 ENSCPRG00005000845 WDR55 (ENSCPRG00005000864) #19 IK (ENSCPRG00005000912) #17 NDUFA2 (ENSCPRG00005000921) #18 TMCO6 (ENSCPRG00005000926) #16 PSD2 (ENSCPRG00005000956) ENSCPRG00005000969 ENSCPRG00005000983 PURA (ENSCPRG00005000988) ENSCPRG00005001011 PFDN1 (ENSCPRG00005001017) HBEGF (ENSCPRG00005001024) SLC4A9 (ENSCPRG00005001036) #7 Lepidosauria ANCESTRAL SPECIES 37 ENSGT00940000159910 ENSGT00940000164266 ENSGT00940000156683.k.a.a ENSGT00940000159725 ENSGT00940000156683.k.b.a ENSGT00940000161193 #29 ENSGT00950000185420 ENSGT00940000160554 #25 ENSGT00940000163564 ENSGT01030000235101 ENSGT00390000008200 ENSGT00940000165142 ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 tuatara MODERN SPECIES 1138 ENSSPUG00000016719 ENSSPUG00000016730 ENSSPUG00000016764 ENSSPUG00000016796 ENSSPUG00000016832 ENSSPUG00000016890 ENSSPUG00000016931 ENSSPUG00000016947 ENSSPUG00000017001 ENSSPUG00000017005 ENSSPUG00000017025 ENSSPUG00000017049 ENSSPUG00000000027 ENSSPUG00000000239 ZMAT2 (ENSSPUG00000000256) #23 ENSSPUG00000000266 ##22 ENSSPUG00000000279 #22 DND1 (ENSSPUG00000000311) #20 ENSSPUG00000000339 Episquamata ANCESTRAL SPECIES 1 ENSGT00940000159725.d.b.b.b ENSGT00940000156683.k.b.a ENSGT00940000159725.d.b.a ENSGT00940000156683.k.b.b.a.a ENSGT00940000156683.k.b.b.a.b ENSGT00940000159725.d.a.b ENSGT00940000161193.a #29 ENSGT00940000159725.d.b.b.a ENSGT00940000159725.d.a.a ENSGT00940000161193.b #29 ENSGT00940000160554 #25 ENSGT00940000163564.h.a ENSGT00940000163564.g.b.b ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 Toxicofera ANCESTRAL SPECIES 1 ENSGT00940000156683.k.b.b.a.b ENSGT00940000159725.d.b.b.b ENSGT00940000156683.k.b.a ENSGT00940000159725.d.b.b.a ENSGT00940000159725.d.a.a ENSGT00940000161193.b #29 ENSGT00940000160554 #25 ENSGT00940000161193.a #29 ENSGT00940000163564.g.b.a.a ENSGT01030000235101 ENSGT00940000163564.g.b.a.b ENSGT00940000163564.h.b ENSGT00940000163564.g.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 Elapidae ANCESTRAL SPECIES 8 ENSGT00940000156683.k.b.b.a.b.c.b ENSGT00940000156683.k.b.b.a.a.c.a.a ENSGT00940000156683.k.b.b.a.a.c.a.b ENSGT00940000156683.k.b.b.a.b.c.a ENSGT00940000159725.d.b.b.b.d ENSGT00940000156683.k.b.a.e.b ENSGT00940000159725.d.b.b.b.c ENSGT00940000156683.k.b.a.e.a ENSGT00940000159725.c ENSGT00940000161193.b.h #29 ENSGT00940000161193.a.c.b #29 ENSGT00940000163564.g.b.a.a.b.a.a.b.a ENSGT00940000163564.g.b.a.a.a.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000165340 Indian cobra MODERN SPECIES 2 ENSNNAG00000005963 #29 ENSNNAG00000005982 #29 ENSNNAG00000006004 #29 ENSNNAG00000006036 PCDHAC1 (ENSNNAG00000006084) ENSNNAG00000006100 ENSNNAG00000006110 ENSNNAG00000006126 ENSNNAG00000006134 ENSNNAG00000006146 ENSNNAG00000006168 ENSNNAG00000006313 ENSNNAG00000006328 ENSNNAG00000006343 ZMAT2 (ENSNNAG00000006363) #23 ENSNNAG00000006368 ##22 ENSNNAG00000006388 ##22 DND1 (ENSNNAG00000006412) #20 WDR55 (ENSNNAG00000006438) #19 IK (ENSNNAG00000006458) #17 NDUFA2 (ENSNNAG00000006480) #18 TMCO6 (ENSNNAG00000006492) #16 ENSNNAG00000006514 APBB3 (ENSNNAG00000006528) #11 ENSNNAG00000006566 #10 ANKHD1 (ENSNNAG00000006769) #9 SLC4A9 (ENSNNAG00000009021) #7 HBEGF (ENSNNAG00000009351) ENSNNAG00000009394 PURA (ENSNNAG00000009426) ENSNNAG00000009430 Elapidae_a ANCESTRAL SPECIES 35 ENSGT00940000163564.g.b.a.a.b.a.a.b.a ENSGT00940000163564.g.b.a.a.a.a ENSGT00990000214303 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000165340 Blue-lipped sea krait DUPLICATION Blue-lipped sea krait MODERN SPECIES 5630 ENSLLTG00000009322 ##22 Blue-lipped sea krait MODERN SPECIES 9901 ENSLLTG00000010311 ##22 Acanthophiinae ANCESTRAL SPECIES 35 ENSGT00940000163564.g.b.a.a.b.a.a.b.a ENSGT00940000163564.g.b.a.a.a.a ENSGT00990000214303 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00980000200052 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000165340 Eastern brown snake MODERN SPECIES 15 ENSPTXG00000005005 #29 ENSPTXG00000005006 #29 PCDHAC1 (ENSPTXG00000005010) ENSPTXG00000005130 ENSPTXG00000005131 ENSPTXG00000005132 ENSPTXG00000005133 ENSPTXG00000002839 ENSPTXG00000002840 ENSPTXG00000002841 ENSPTXG00000002843 ENSPTXG00000002844 ENSPTXG00000002845 ENSPTXG00000002848 ZMAT2 (ENSPTXG00000002851) #23 ENSPTXG00000002853 ##22 ENSPTXG00000002856 ##22 DND1 (ENSPTXG00000002857) #20 WDR55 (ENSPTXG00000002858) #19 IK (ENSPTXG00000002939) #17 NDUFA2 (ENSPTXG00000002943) #18 TMCO6 (ENSPTXG00000002945) #16 ENSPTXG00000002947 ENSPTXG00000002950 #11 SRA1 (ENSPTXG00000002952) #10 ANKHD1 (ENSPTXG00000002988) #9 SLC4A9 (ENSPTXG00000003327) #7 HBEGF (ENSPTXG00000003338) PFDN1 (ENSPTXG00000003339) PURA (ENSPTXG00000003343) ENSPTXG00000003344 Mainland tiger snake MODERN SPECIES 45 ENSNSUG00000012414 ENSNSUG00000012412 ENSNSUG00000012411 ENSNSUG00000012410 ZMAT2 (ENSNSUG00000012409) #23 ENSNSUG00000012408 ##22 ENSNSUG00000012407 ##22 DND1 (ENSNSUG00000012406) #20 WDR55 (ENSNSUG00000012405) #19 ENSNSUG00000012404 IK (ENSNSUG00000012170) #17 NDUFA2 (ENSNSUG00000012168) #18 TMCO6 (ENSNSUG00000012103) #16 ENSNSUG00000012101 ENSNSUG00000012100 #11 ENSNSUG00000012099 #11 SRA1 (ENSNSUG00000012098) #10 ANKHD1 (ENSNSUG00000010898) #9 SLC4A9 (ENSNSUG00000010884) #7 HBEGF (ENSNSUG00000010883) PFDN1 (ENSNSUG00000010882) Lizard MODERN SPECIES 3 ENSACAG00000012366 ENSACAG00000038653 #29 ENSACAG00000040218 #29 ENSACAG00000044665 ENSACAG00000040781 #29 PCDHAC2 (ENSACAG00000038077) #25 ENSACAG00000028111 ENSACAG00000035663 ENSACAG00000037963 ENSACAG00000024094 ENSACAG00000045172 ENSACAG00000025348 ENSACAG00000022341 ENSACAG00000012745 ZMAT2 (ENSACAG00000042409) #23 ENSACAG00000035995 ##22 ENSACAG00000012768 ##22 ENSACAG00000012923 #14 ENSACAG00000012925 #20 WDR55 (ENSACAG00000035929) #19 IK (ENSACAG00000012937) #17 NDUFA2 (ENSACAG00000012978) #18 TMCO6 (ENSACAG00000012987) #16 ENSACAG00000013008 #14 ENSACAG00000038086 SLC35A4 (ENSACAG00000013009) #12 ENSACAG00000035509 APBB3 (ENSACAG00000013016) #11 SRA1 (ENSACAG00000013148) #10 ANKHD1 (ENSACAG00000013168) #9 SLC4A9 (ENSACAG00000013391) #7 Laterata ANCESTRAL SPECIES 5 ENSGT00940000156683.k.b.b.a.a ENSGT00940000156683.k.b.b.a.b ENSGT00940000159725.d.a.b ENSGT00940000161193.a #29 ENSGT00940000163564.g.b.b.b ENSGT00940000159725.d.a.a ENSGT00940000161193.b #29 ENSGT00940000160554 #25 ENSGT00940000163564.h.a.a ENSGT00940000163564.h.b ENSGT00940000163564.g.a ENSGT00940000163564.g.b.b.a ENSGT00980000198828 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.b.c.b ##22 ENSGT00390000005922.b.c.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 Argentine black and white tegu MODERN SPECIES 36 ENSSMRG00000019049 ENSSMRG00000019048 ENSSMRG00000019047 ENSSMRG00000019046 ENSSMRG00000019045 #29 ENSSMRG00000019044 #29 ENSSMRG00000019043 #29 ENSSMRG00000019042 ENSSMRG00000019041 PCDHAC2 (ENSSMRG00000019040) #25 ENSSMRG00000019039 ENSSMRG00000019037 ENSSMRG00000019036 ENSSMRG00000019035 ZMAT2 (ENSSMRG00000019034) #23 ENSSMRG00000019033 ##22 ENSSMRG00000019032 ##22 DND1 (ENSSMRG00000019031) #20 WDR55 (ENSSMRG00000019030) #19 NDUFA2 (ENSSMRG00000019029) #18 ENSSMRG00000019028 SLC35A4 (ENSSMRG00000019027) #12 ENSSMRG00000019026 APBB3 (ENSSMRG00000019025) #11 SRA1 (ENSSMRG00000019024) #10 ANKHD1 (ENSSMRG00000018661) #9 SLC4A9 (ENSSMRG00000018652) #7 HBEGF (ENSSMRG00000018650) PFDN1 (ENSSMRG00000018649) ENSSMRG00000018648 PURA (ENSSMRG00000018647) Common wall lizard MODERN SPECIES 15 ENSPMRG00000008109 #29 ENSPMRG00000008115 #29 ENSPMRG00000008128 #29 ENSPMRG00000008132 #29 ENSPMRG00000008192 ENSPMRG00000008230 ENSPMRG00000008302 ENSPMRG00000008313 ENSPMRG00000008320 ENSPMRG00000008329 ENSPMRG00000008344 ENSPMRG00000008355 ENSPMRG00000008368 ENSPMRG00000008376 ZMAT2 (ENSPMRG00000008382) #23 ENSPMRG00000008400 ##22 ENSPMRG00000008433 ##22 DND1 (ENSPMRG00000008511) #20 IK (ENSPMRG00000008584) #17 NDUFA2 (ENSPMRG00000008790) #18 TMCO6 (ENSPMRG00000008797) #16 ENSPMRG00000008804 ENSPMRG00000008810 #14 SLC35A4 (ENSPMRG00000008812) #12 ENSPMRG00000008817 APBB3 (ENSPMRG00000008830) #11 SRA1 (ENSPMRG00000008858) #10 ANKHD1 (ENSPMRG00000009470) #9 SLC4A9 (ENSPMRG00000012396) #7 HBEGF (ENSPMRG00000012412) PFDN1 (ENSPMRG00000012416) Coelacanth DUPLICATION Coelacanth MODERN SPECIES 1742 ENSLACG00000008820 ENSLACG00000008141 SRA1 (ENSLACG00000007697) #10 APBB3 (ENSLACG00000007086) #11 ENSLACG00000006988 SLC35A4 (ENSLACG00000006955) #12 TMCO6 (ENSLACG00000005941) #16 NDUFA2 (ENSLACG00000005796) #18 IK (ENSLACG00000005208) #17 ENSLACG00000004215 ENSLACG00000003881 ENSLACG00000002711 #22 hars (ENSLACG00000001684) #22 ZMAT2 (ENSLACG00000001030) #23 Coelacanth MODERN SPECIES 1742 ENSLACG00000008820 ENSLACG00000008141 SRA1 (ENSLACG00000007697) #10 APBB3 (ENSLACG00000007086) #11 ENSLACG00000006988 SLC35A4 (ENSLACG00000006955) #12 TMCO6 (ENSLACG00000005941) #16 NDUFA2 (ENSLACG00000005796) #18 IK (ENSLACG00000005208) #17 ENSLACG00000004215 ENSLACG00000003881 ENSLACG00000002711 #22 hars (ENSLACG00000001684) #22 ZMAT2 (ENSLACG00000001030) #23 Actinopterygii ANCESTRAL SPECIES 30 ENSGT00390000006983.b ENSGT00940000156167.a ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a.a ENSGT00940000164078.a.b ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00990000205617 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00390000010712 #23 ENSGT00950000183362 ENSGT00940000163777.b ENSGT00940000164725 ENSGT00940000165118 ENSGT01020000230605 ENSGT00940000164468 ENSGT00940000164983 ENSGT01030000235223 ENSGT01060000248588.a.c.a ENSGT00940000158371 ENSGT00950000186323 ENSGT00390000002137 ENSGT00940000155317.a.b Reedfish MODERN SPECIES 2 APBB3 (ENSECRG00000014499) #11 SRA1 (ENSECRG00000014471) #10 HMGXB3 (ENSECRG00000014406) sumo3a (ENSECRG00000014340) ENSECRG00000014313 csf1ra (ENSECRG00000014257) pdgfrb (ENSECRG00000014164) cdx1b (ENSECRG00000014111) camk2a (ENSECRG00000013873) ARSI (ENSECRG00000013768) tmco6 (ENSECRG00000013730) #16 ndufa2 (ENSECRG00000013696) #18 ik (ENSECRG00000013652) #17 wdr55 (ENSECRG00000013620) #19 ENSECRG00000013595 hars (ENSECRG00000011628) #22 DND1 (ENSECRG00000011600) #20 zmat2 (ENSECRG00000011584) #23 ENSECRG00000011487 ENSECRG00000011395 ENSECRG00000011316 ENSECRG00000011286 ENSECRG00000011243 ENSECRG00000011222 ENSECRG00000011206 ENSECRG00000011199 ENSECRG00000011193 ENSECRG00000011187 ENSECRG00000011183 ENSECRG00000011178 ENSECRG00000011175 Neopterygii ANCESTRAL SPECIES 105 ENSGT00940000156167.a ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a.a ENSGT00940000164078.a.b ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT01060000249180 ENSGT00390000008104 #16 ENSGT00390000006178 #18 ENSGT00940000153727.b #17 ENSGT00940000153727.a #19 ENSGT00990000205617 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00390000010712 #23 Spotted gar MODERN SPECIES 672 APBB3 (ENSLOCG00000011042) #11 SRA1 (ENSLOCG00000011051) #10 HMGXB3 (ENSLOCG00000011060) csf1ra (ENSLOCG00000011078) pdgfrb (ENSLOCG00000011097) cdx1b (ENSLOCG00000011109) SLC6A7 (ENSLOCG00000011116) ENSLOCG00000011133 CAMK2A (ENSLOCG00000011137) ARSI (ENSLOCG00000011152) ENSLOCG00000011159 tmco6 (ENSLOCG00000011172) #16 ndufa2 (ENSLOCG00000011183) #18 ik (ENSLOCG00000011188) #17 ENSLOCG00000011195 hars (ENSLOCG00000011198) #22 dnd1 (ENSLOCG00000011212) #20 zmat2 (ENSLOCG00000011219) #23 ENSLOCG00000011226 ENSLOCG00000011229 ENSLOCG00000018307 pcdh2aa1 (ENSLOCG00000018308) ENSLOCG00000011233 ENSLOCG00000011253 ENSLOCG00000011258 pcdh1g2 (ENSLOCG00000011265) ENSLOCG00000011280 ENSLOCG00000011292 ENSLOCG00000011299 ENSLOCG00000018309 ENSLOCG00000011309 Osteoglossocephalai ANCESTRAL SPECIES 248 ENSGT00990000205617 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00530000063652.a.b ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a.c ENSGT00940000157357.e.b ENSGT00940000159674 ENSGT00950000183162.a.a.d ENSGT00940000158778 ENSGT00940000164430.a.a ENSGT01080000257601 ENSGT00940000154901.C.b ENSGT00950000183148.b.a.g.b ENSGT00940000157258 Osteoglossiformes ANCESTRAL SPECIES 33 ENSGT00390000000703 ENSGT00390000008961 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844.b ENSGT00390000000002.a.a.b #11 ENSGT00390000006983.b ENSGT00940000156167.a.d ENSGT00940000155506.e ENSGT00940000157138.a ENSGT00940000164078.a.b.b ENSGT00940000159769.a.b ENSGT00940000157656.a ENSGT01060000249180 ENSGT00390000008104 #16 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00940000156931.c ENSGT00530000064262.pc.b ENSGT00940000166356.f ENSGT00530000063652.a.b ENSGT00390000008582 ENSGT00940000165110.d ENSGT00940000153169.B ENSGT00940000154445.b ENSGT00940000154108.a.d ENSGT00940000157357.e.a.e ENSGT00940000159674.h ENSGT00950000183162.a.a.d ENSGT00940000158778.f Asian bonytongue MODERN SPECIES 4 cd74a (ENSSFOG00015014822) SLC35A4 (ENSSFOG00015014809) #12 ENSSFOG00015027334 APBB3 (ENSSFOG00015014791) #11 HMGXB3 (ENSSFOG00015014769) ENSSFOG00015014760 csf1ra (ENSSFOG00015014696) pdgfrb (ENSSFOG00015014672) ENSSFOG00015024394 ENSSFOG00015027305 ENSSFOG00015012034 ARSI (ENSSFOG00015011993) ENSSFOG00015029909 tmco6 (ENSSFOG00015011913) #16 ENSSFOG00015011824 hars (ENSSFOG00015011741) #22 dnd1 (ENSSFOG00015011717) #20 gfra3 (ENSSFOG00015032912) kif20a (ENSSFOG00015011576) brd8b (ENSSFOG00015011553) ENSSFOG00015011534 ENSSFOG00015011529 sting1 (ENSSFOG00015011514) ENSSFOG00015011422 ENSSFOG00015025538 zgc:110843 (ENSSFOG00015011359) CXXC5 (ENSSFOG00015033199) zgc:100829 (ENSSFOG00015011328) PSD2 (ENSSFOG00015011297) PURA (ENSSFOG00015027763) NRG2 (ENSSFOG00015028862) P. kingsleyae MODERN SPECIES 249 GANAB (ENSPKIG00000020183) ENSPKIG00000020219 ubxn1 (ENSPKIG00000020247) CNIH2 (ENSPKIG00000020266) ENSPKIG00000020297 ENSPKIG00000020312 ENSPKIG00000020323 ttc9c (ENSPKIG00000020339) zgc:153018 (ENSPKIG00000020371) ENSPKIG00000020382 ENSPKIG00000020405 ENSPKIG00000020467 ARSI (ENSPKIG00000020477) tmco6 (ENSPKIG00000020502) #16 ENSPKIG00000020566 hars (ENSPKIG00000020638) #22 dnd1 (ENSPKIG00000020709) #20 gfra3 (ENSPKIG00000020725) kif20a (ENSPKIG00000020756) brd8b (ENSPKIG00000020824) ENSPKIG00000020900 ENSPKIG00000020917 sting1 (ENSPKIG00000020939) ENSPKIG00000020987 ENSPKIG00000021044 zgc:110843 (ENSPKIG00000021067) CXXC5 (ENSPKIG00000021076) zgc:100829 (ENSPKIG00000021104) ENSPKIG00000021135 puraa (ENSPKIG00000021168) NRG2 (ENSPKIG00000021183) Clupeocephala ANCESTRAL SPECIES 87 ENSGT00390000008961 ENSGT00940000174022 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844.b ENSGT00390000006983.b ENSGT00940000155506.e ENSGT00940000157138.a ENSGT00940000164078.a.a ENSGT00940000157656.a ENSGT00390000008104 #16 ENSGT00990000205617 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00530000064262.pc.b ENSGT00530000063652.a.b ENSGT00390000008582 ENSGT00940000165110.b ENSGT00940000153169.B ENSGT00940000154445.b ENSGT00940000153169.A.b.a ENSGT00940000154108.a.c ENSGT00940000157357.e.b ENSGT00940000159674 ENSGT00950000183162.a.a.d ENSGT00940000158778.d ENSGT00940000164878.a Otomorpha ANCESTRAL SPECIES 49 ENSGT00390000008961.a ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844.a ENSGT00390000006983.b ENSGT00940000155506.e ENSGT00940000157138.a ENSGT00940000164078.a.a ENSGT00940000157656.a ENSGT01060000249129 ENSGT00390000008104 #16 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00530000064262.pc.b ENSGT00530000063652.a.b ENSGT00390000008582 ENSGT00940000165110.b ENSGT00940000153169.B ENSGT00940000154445.b ENSGT00940000154108.a.c ENSGT00940000154108.a.d.f ENSGT00940000161678 ENSGT00940000159674 ENSGT00950000183162.a.a.d ENSGT00940000158778.d ENSGT00940000164878.a Clupeiformes ANCESTRAL SPECIES 388 ENSGT00390000008961.a ENSGT00950000182827.F #12 ENSGT00390000007844.b ENSGT00390000006983.b ENSGT00940000155506.e ENSGT00940000157138.a ENSGT00940000157656.a ENSGT01060000249129 ENSGT00390000008104 #16 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a Denticle herring MODERN SPECIES 9 MID2 (ENSDCDG00000028153) ENSDCDG00000028145 ENSDCDG00000028144 PCDH1 (ENSDCDG00000028139) cd74a (ENSDCDG00000028134) SLC35A4 (ENSDCDG00000028131) #12 ENSDCDG00000028130 HMGXB3 (ENSDCDG00000028129) csf1ra (ENSDCDG00000027085) pdgfrb (ENSDCDG00000026545) ENSDCDG00000026521 ENSDCDG00000026518 ARSI (ENSDCDG00000026500) ENSDCDG00000026496 tmco6 (ENSDCDG00000026491) #16 hars (ENSDCDG00000026481) #22 DND1 (ENSDCDG00000026361) #20 gfra3 (ENSDCDG00000026344) rom1b (ENSDCDG00000026342) ccdc88b (ENSDCDG00000026340) FLRT1 (ENSDCDG00000026339) macrod1 (ENSDCDG00000026338) fermt3b (ENSDCDG00000025903) trpt1 (ENSDCDG00000025894) ZBTB3 (ENSDCDG00000025893) rnaseh2c (ENSDCDG00000025889) foxa (ENSDCDG00000025886) zdhhc24 (ENSDCDG00000025885) ENSDCDG00000025884 urp1 (ENSDCDG00000025883) clic2 (ENSDCDG00000025877) Atlantic herring MODERN SPECIES 12 ENSCHAG00000020350 ENSCHAG00000020368 PCDH12 (ENSCHAG00000020375) ENSCHAG00000020383 ENSCHAG00000020469 MAML1 (ENSCHAG00000020475) mgat4b (ENSCHAG00000020498) sqstm1 (ENSCHAG00000020888) ENSCHAG00000021000 POLR1A (ENSCHAG00000021078) ptcd3 (ENSCHAG00000023293) immt (ENSCHAG00000023348) rnf103 (ENSCHAG00000023654) abhd18 (ENSCHAG00000023675) tmco6 (ENSCHAG00000023793) #16 hars (ENSCHAG00000023816) #22 ENSCHAG00000023908 #20 ENSCHAG00000023989 lect2.1 (ENSCHAG00000024002) F2RL3 (ENSCHAG00000024022) ENSCHAG00000024027 F2RL3 (ENSCHAG00000024030) F2RL3 (ENSCHAG00000024032) rnf130 (ENSCHAG00000024044) ENSCHAG00000024104 TBC1D9B (ENSCHAG00000024131) ENSCHAG00000024411 zgc:152774 (ENSCHAG00000024414) pmt (ENSCHAG00000024422) KCNIP1 (ENSCHAG00000024486) TLX3 (ENSCHAG00000024510) Otophysi ANCESTRAL SPECIES 304 ENSGT00940000166254.a ENSGT00940000164577.b ENSGT00940000177027 ENSGT00940000165461 ENSGT00950000183027.a.a.b ENSGT00940000154508.a.a.s.b ENSGT00520000055589.d.a.a ENSGT00940000163251.b.j ENSGT00520000055589.d.b ENSGT00390000006550 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00530000064262.pc.b ENSGT00530000063652.a.b ENSGT00390000008582 ENSGT00940000165110.b Cyprinoidei ANCESTRAL SPECIES 45 ENSGT00940000159595 ENSGT00940000154735.d.b ENSGT00940000163328.c ENSGT00940000165206.d.e ENSGT00940000158334 ENSGT00940000156901.A.d ENSGT00940000168499.c ENSGT00390000002731 ENSGT00940000164681 ENSGT00520000055589.d.a.a.a ENSGT00520000055589.d.b ENSGT00520000055589.d.a.a.b ENSGT00390000006550 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00530000064262.pc.b ENSGT00530000063652.a.b ENSGT00390000008582 ENSGT00940000165110.b ENSGT00940000153169.B.f ENSGT00940000154445.b ENSGT00940000154108.a.d.f ENSGT00940000161678 ENSGT00940000159674 ENSGT00950000183162.a.a.d ENSGT00940000158778.d ENSGT00940000164878.a ENSGT00390000011180 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 220 ENSGT00940000154735.d.b.a ENSGT00940000163328.c.c ENSGT00940000165206.d.e.a ENSGT00940000158334.f ENSGT00940000156901.A.d.a ENSGT00940000154735.d.b.b ENSGT00940000163328.c.d ENSGT00940000165206.d.e.b ENSGT00940000158334.e ENSGT00940000156901.A.d.b ENSGT00390000002731.d ENSGT00940000164681.a ENSGT00520000055589.d.a.a.a.b ENSGT00520000055589.c.h ENSGT00390000006550.d ENSGT00390000005922.b.g #22 ENSGT00940000159225.s #20 ENSGT00940000165282.a.a ENSGT00530000064262.pc.b.q ENSGT00530000063652.a.b.h ENSGT00390000008582.a ENSGT00940000165110.b.g ENSGT00940000153169.B.e ENSGT00940000154445.b.c ENSGT00940000154108.a.d.f.b ENSGT00940000161678.a.b ENSGT00940000159674.k ENSGT00950000183162.a.a.d.a ENSGT00940000158778.d.a ENSGT00940000164878.a.c ENSGT00390000011180.f Goldfish MODERN SPECIES 32 ENSCARG00000070196 thg1l (ENSCARG00000070197) ENSCARG00000070199 ENSCARG00000070200 gfCLK4a (ENSCARG00000070209) rack1 (ENSCARG00000070227) hnrnpaba (ENSCARG00000070242) eif4ebp3l (ENSCARG00000070247) ENSCARG00000070248 ENSCARG00000070261 ctsf (ENSCARG00000070302) hbegfa (ENSCARG00000070328) trpt1 (ENSCARG00000070330) ENSCARG00000070331 trappc11 (ENSCARG00000006107) hars (ENSCARG00000006383) #22 dnd (ENSCARG00000006686) #20 gfra3 (ENSCARG00000006698) brd8b (ENSCARG00000006727) ENSCARG00000006873 sting1 (ENSCARG00000006878) ppp3cb (ENSCARG00000007001) ENSCARG00000009478 zgc:110843 (ENSCARG00000009672) CXXC5 (ENSCARG00000009680) zgc:92242 (ENSCARG00000009685) PSD2 (ENSCARG00000009716) PURA (ENSCARG00000010958) nrg2b (ENSCARG00000010963) ENSCARG00000010975 adrb2a (ENSCARG00000010977) Cyprininae_a ANCESTRAL SPECIES 72 ENSGT00390000011705.g.b ENSGT00940000159624.d ENSGT00940000165778.f ENSGT00940000154461.tc.a.a ENSGT00940000159595 ENSGT00940000154735.d.b.b ENSGT00940000163328.c.d ENSGT00940000165206.d.e.b ENSGT00940000158334.e ENSGT00940000156901.A.d.b ENSGT00390000002731.d ENSGT00940000164681.a ENSGT00520000055589.d.a.a.a.b ENSGT00520000055589.c.h ENSGT00390000006550.d ENSGT00390000005922.b.g #22 ENSGT00940000159225.s #20 ENSGT00940000165282.a.a ENSGT00530000064262.pc.b.q ENSGT00530000063652.a.b.h ENSGT00390000008582.a ENSGT00940000165110.b.g ENSGT00940000153169.B.e ENSGT00940000154445.b.c ENSGT00940000154108.a.d.f.b ENSGT00940000161678.a.b ENSGT00940000159674.k ENSGT00950000183162.a.a.d.a ENSGT00940000158778.d.a ENSGT00940000164878.a.c ENSGT00390000011180.f Golden-line barbel MODERN SPECIES 678 ENSSGRG00000024920 rack1 (ENSSGRG00000024499) nme5 (ENSSGRG00000024489) hnrnpaba (ENSSGRG00000024488) hnrnph1 (ENSSGRG00000024486) ENSSGRG00000024485 ENSSGRG00000024482 ENSSGRG00000024480 hbegfa (ENSSGRG00000024476) trpt1 (ENSSGRG00000024475) ctsf (ENSSGRG00000023990) STOX2 (ENSSGRG00000023985) ENSSGRG00000023984 trappc11 (ENSSGRG00000022830) hars (ENSSGRG00000022583) #22 dnd1 (ENSSGRG00000022574) #20 gfra3 (ENSSGRG00000022572) brd8b (ENSSGRG00000022569) ENSSGRG00000022565 sting1 (ENSSGRG00000022563) ppp3cb (ENSSGRG00000022164) ENSSGRG00000022155 zgc:110843 (ENSSGRG00000022154) CXXC5 (ENSSGRG00000022153) zgc:92242 (ENSSGRG00000022152) PSD2 (ENSSGRG00000022150) PURA (ENSSGRG00000022148) nrg2b (ENSSGRG00000022147) dnajc4 (ENSSGRG00000022144) ENSSGRG00000022143 Common carp reference MODERN SPECIES 20 thg1l (ENSCCRG00000016202) ENSCCRG00000015276 ENSCCRG00000055662 ENSCCRG00000031662 ENSCCRG00000035988 rack1 (ENSCCRG00000036241) hnrnpaba (ENSCCRG00000066529) eif4ebp3l (ENSCCRG00000036257) hnrnph1 (ENSCCRG00000022763) ENSCCRG00000036268 hbegfa (ENSCCRG00000030451) trpt1 (ENSCCRG00000078840) ctsf (ENSCCRG00000024650) ENSCCRG00000022407 trappc11 (ENSCCRG00000034877) hars (ENSCCRG00000057390) #22 dnd1 (ENSCCRG00000034954) #20 gfra3 (ENSCCRG00000018333) brd8b (ENSCCRG00000023071) ENSCCRG00000054648 sting1 (ENSCCRG00000059466) ppp3cb (ENSCCRG00000042184) ENSCCRG00000050789 zgc:110843 (ENSCCRG00000050782) ENSCCRG00000050781 zgc:92242 (ENSCCRG00000063209) PSD2 (ENSCCRG00000050724) ENSCCRG00000061845 nrg2b (ENSCCRG00000017661) ENSCCRG00000075248 eif1ad (ENSCCRG00000017668) Cyprininae ANCESTRAL SPECIES 171 ENSGT00390000002731.c ENSGT00940000164681.b ENSGT00520000055589.d.a.a.a.a ENSGT00390000006550.c ENSGT00390000005922.b.h #22 ENSGT00940000159225.t #20 ENSGT00940000165282.a.b ENSGT00530000064262.pc.b.r.a ENSGT00530000063652.a.b.g ENSGT00390000008582.b ENSGT00940000165110.b.h ENSGT00940000153169.B.f ENSGT00940000154445.b.d ENSGT00940000154108.a.d.f.a ENSGT00940000161678.a.a ENSGT00940000159674.l ENSGT00950000183162.a.a.d.b ENSGT00940000158778.d.b ENSGT00940000164878.a.d ENSGT00390000011180.e Goldfish MODERN SPECIES 5 hmx2 (ENSCARG00000021933) ENSCARG00000021947 ENSCARG00000021962 rack1 (ENSCARG00000022235) nme5 (ENSCARG00000022323) hnrnpaba (ENSCARG00000022341) eif4ebp3l (ENSCARG00000022352) hnrnph1 (ENSCARG00000022373) ENSCARG00000022417 hbegfa (ENSCARG00000022744) trpt1 (ENSCARG00000022760) ctsf (ENSCARG00000022779) ENSCARG00000022813 ENSCARG00000022817 trappc11 (ENSCARG00000022826) hars (ENSCARG00000022940) #22 dnd1 (ENSCARG00000024154) #20 gfra3 (ENSCARG00000024160) brd8b (ENSCARG00000024187) ENSCARG00000024636 sting1 (ENSCARG00000024650) ppp3cb (ENSCARG00000024722) ube2d2 (ENSCARG00000025785) zgc:110843 (ENSCARG00000026090) CXXC5 (ENSCARG00000026111) zgc:92242 (ENSCARG00000026124) PSD2 (ENSCARG00000026185) PURA (ENSCARG00000026567) nrg2b (ENSCARG00000026579) eif1ad (ENSCARG00000026674) tmco6 (ENSCARG00000026691) #16 Cyprininae_a ANCESTRAL SPECIES 520 ENSGT00940000154735.d.b.a ENSGT00940000163328.c.c ENSGT00940000165206.d.e.a ENSGT00940000158334.f ENSGT00940000156901.A.d.a ENSGT00390000002731.c ENSGT00940000164681.b ENSGT00520000055589.d.a.a.a.a ENSGT00390000006550.c ENSGT00390000005922.b.h #22 ENSGT00940000159225.t #20 ENSGT00940000165282.a.b ENSGT00530000064262.pc.b.r.a ENSGT00530000063652.a.b.g Common carp reference MODERN SPECIES 35 nipsnap3a (ENSCCRG00000016213) ENSCCRG00000073862 ENSCCRG00000069514 ENSCCRG00000066619 ENSCCRG00000058552 rack1 (ENSCCRG00000062361) hnrnpaba (ENSCCRG00000036255) eif4ebp3l (ENSCCRG00000080715) hnrnph1 (ENSCCRG00000036278) ENSCCRG00000022795 hbegfa (ENSCCRG00000023650) trpt1 (ENSCCRG00000024638) ctsf (ENSCCRG00000023913) ENSCCRG00000026553 trappc11 (ENSCCRG00000024577) hars (ENSCCRG00000005913) #22 dnd1 (ENSCCRG00000062552) #20 gfra3 (ENSCCRG00000005529) brd8b (ENSCCRG00000037745) ENSCCRG00000080069 sting1 (ENSCCRG00000023085) ppp3cb (ENSCCRG00000071308) ube2d2 (ENSCCRG00000059308) zgc:110843 (ENSCCRG00000024025) ENSCCRG00000024021 zgc:92242 (ENSCCRG00000014627) PSD2 (ENSCCRG00000057284) ENSCCRG00000002581 nrg2b (ENSCCRG00000050709) ENSCCRG00000050706 eif1ad (ENSCCRG00000050705) Golden-line barbel MODERN SPECIES 88 ENSSGRG00000040189 thg1l (ENSSGRG00000040193) ENSSGRG00000040196 ENSSGRG00000040221 rack1 (ENSSGRG00000040885) nme5 (ENSSGRG00000041174) hnrnpaba (ENSSGRG00000041177) eif4ebp3l (ENSSGRG00000041178) hnrnph1 (ENSSGRG00000041189) RUFY1 (ENSSGRG00000041279) hbegfa (ENSSGRG00000041458) trpt1 (ENSSGRG00000041461) ctsf (ENSSGRG00000041463) STOX2 (ENSSGRG00000041538) trappc11 (ENSSGRG00000041553) hars (ENSSGRG00000042354) #22 dnd1 (ENSSGRG00000043048) #20 gfra3 (ENSSGRG00000043049) brd8b (ENSSGRG00000043062) ENSSGRG00000043416 Zebrafish MODERN SPECIES 5 ENSDARG00000100249 ENSDARG00000089372 rack1 (ENSDARG00000041619) nme5 (ENSDARG00000041617) hnrnpaba (ENSDARG00000007960) eif4ebp3l (ENSDARG00000041607) hnrnph1 (ENSDARG00000040881) RUFY1 (ENSDARG00000078685) hbegfa (ENSDARG00000075121) ENSDARG00000100596 trpt1 (ENSDARG00000037628) ctsf (ENSDARG00000063095) STOX2 (ENSDARG00000078572) ENSDARG00000099304 trappc11 (ENSDARG00000004726) hars (ENSDARG00000003693) #22 dnd1 (ENSDARG00000022813) #20 gfra3 (ENSDARG00000087704) brd8b (ENSDARG00000025071) sting1 (ENSDARG00000091058) ppp3cb (ENSDARG00000025106) ube2d2 (ENSDARG00000043484) zgc:110843 (ENSDARG00000073845) ENSDARG00000075735 zgc:92242 (ENSDARG00000029443) PSD2 (ENSDARG00000063036) PURA (ENSDARG00000099614) nrg2b (ENSDARG00000086585) ENSDARG00000089094 eif1ad (ENSDARG00000016280) tmco6 (ENSDARG00000016336) #16 Characiphysae ANCESTRAL SPECIES 86 ENSGT00940000158996 ENSGT00390000014412.l ENSGT00940000164356.a ENSGT00940000164356.b ENSGT00950000183177.a.a.a.a.g ENSGT00940000178677 ENSGT00940000166254.a ENSGT00940000164577.b ENSGT00940000177027 ENSGT00940000165461 ENSGT00950000183027.a.a.b ENSGT00940000154508.a.a.s.b ENSGT00520000055589.d.a.a ENSGT00940000163251.b.j ENSGT00390000006550 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00530000064262.pc.b ENSGT00530000063652.a.b ENSGT00390000008582 ENSGT00940000165110.b ENSGT00940000153169.B ENSGT00940000154445.b ENSGT00940000154108.a.d.f ENSGT01060000248588.a.c.b.e ENSGT00940000162460.s ENSGT00940000159784 ENSGT00950000183003.a.a.a.a.b.d ENSGT00940000159568 ENSGT00940000155756.p Channel catfish MODERN SPECIES 5 Tmem173 (ENSIPUG00000011996) si:ch211-39i2.2 (ENSIPUG00000011973) brd8 (ENSIPUG00000011835) DPY19L4 (ENSIPUG00000011756) KDM1B (ENSIPUG00000011710) cfap69 (ENSIPUG00000011653) sfxn1 (ENSIPUG00000011608) SEPT8b (ENSIPUG00000011324) CCNG1 (ENSIPUG00000011238) nudcd2 (ENSIPUG00000011272) gabra6a (ENSIPUG00000011213) gabrb2a (ENSIPUG00000011129) ATP10B (ENSIPUG00000011091) ENSIPUG00000011079 trappc11 (ENSIPUG00000010843) hars (ENSIPUG00000010757) #22 dnd1 (ENSIPUG00000010743) #20 gfra3 (ENSIPUG00000010739) ENSIPUG00000010715 STOX2 (ENSIPUG00000010694) acsl1b (ENSIPUG00000010613) ENSIPUG00000010567 ENSIPUG00000010512 ENSIPUG00000010492 rgs14a (ENSIPUG00000010477) ENSIPUG00000010459 SLC34A1 (ENSIPUG00000010376) ENSIPUG00000010353 bnip1 (ENSIPUG00000010328) nkx2-5 (ENSIPUG00000010324) STC2 (ENSIPUG00000010313) Characiphysae_b ANCESTRAL SPECIES 32 ENSGT00940000154998.a.b ENSGT00390000005989.a.b.b ENSGT00940000158996 ENSGT00390000014412.l ENSGT00940000164356.a ENSGT00940000164356.b ENSGT00950000183177.a.a.a.a.g ENSGT00940000178677 ENSGT00940000166254.a ENSGT00940000164577.b ENSGT00940000177027 ENSGT00940000154508.a.a.s.b ENSGT00520000055589.d.a.a ENSGT00940000163251.b.j ENSGT00390000006550 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00530000064262.pc.b ENSGT00530000063652.a.b ENSGT00390000008582 ENSGT00940000165110.b ENSGT00940000153169.B ENSGT00940000154445.b ENSGT00940000154108.a.d.f ENSGT01060000248588.a.c.b.e ENSGT00940000162460.s ENSGT00940000159784 ENSGT00950000183003.a.a.a.a.b.d ENSGT00940000159568 ENSGT00940000155756.p Electric eel MODERN SPECIES 274 DRD1 (ENSEEEG00000012860) msx2a (ENSEEEG00000012862) cpeb4a (ENSEEEG00000012864) stc2a (ENSEEEG00000012880) nkx2.5 (ENSEEEG00000012882) BNIP1 (ENSEEEG00000012883) adra2da (ENSEEEG00000012884) SLC34A1 (ENSEEEG00000012885) rgs14a (ENSEEEG00000012893) ENSEEEG00000012895 RBM22 (ENSEEEG00000012898) acsl1b (ENSEEEG00000012946) STOX2 (ENSEEEG00000013530) ENSEEEG00000013533 trappc11 (ENSEEEG00000013539) hars (ENSEEEG00000013558) #22 dnd1 (ENSEEEG00000013898) #20 gfra3 (ENSEEEG00000013932) brd8b (ENSEEEG00000013936) ENSEEEG00000013946 sting1 (ENSEEEG00000013947) ppp3cb (ENSEEEG00000013950) ube2d2 (ENSEEEG00000014054) zgc:110843 (ENSEEEG00000014298) CXXC5 (ENSEEEG00000014300) zgc:92242 (ENSEEEG00000014301) Characoidei ANCESTRAL SPECIES 102 ENSGT00940000159824 ENSGT00940000154998.a.b ENSGT00390000005989.a.b.b ENSGT00940000158996 ENSGT00390000014412.l ENSGT00940000164356.a.g ENSGT00950000183177.a.a.a.a.g ENSGT00940000178677 ENSGT00940000166254.a ENSGT00940000164577.b ENSGT00940000177027 ENSGT00940000154508.a.a.s.b ENSGT00520000055589.d.a.a ENSGT00940000163251.b.j ENSGT00390000006550 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00530000064262.pc.b ENSGT00530000063652.a.b ENSGT00390000008582 ENSGT00940000165110.b ENSGT00940000153169.B ENSGT00940000154445.b ENSGT00940000154108.a.d.f ENSGT01060000248588.a.c.b.e ENSGT00940000162460.s ENSGT00940000159784 ENSGT00950000183003.a.a.a.a.b.d ENSGT00940000159568 ENSGT00940000159491 Mexicana tetra MODERN SPECIES 23 BNIP1 (ENSAMXG00000038546) adra2db (ENSAMXG00000025107) SLC34A1 (ENSAMXG00000018474) ENSAMXG00000044001 rgs14a (ENSAMXG00000034408) arl3l2 (ENSAMXG00000018516) ENSAMXG00000036134 ENSAMXG00000041314 ENSAMXG00000039734 ENSAMXG00000033466 RBM22 (ENSAMXG00000018529) acsl1b (ENSAMXG00000018560) STOX2 (ENSAMXG00000018621) ENSAMXG00000031413 trappc11 (ENSAMXG00000018665) hars (ENSAMXG00000018719) #22 dnd1 (ENSAMXG00000018752) #20 gfra3 (ENSAMXG00000018757) ENSAMXG00000036623 brd8b (ENSAMXG00000018774) ENSAMXG00000018794 sting1 (ENSAMXG00000035008) ppp3cb (ENSAMXG00000034364) ube2d2 (ENSAMXG00000030550) zgc:110843 (ENSAMXG00000029462) ENSAMXG00000031777 CXXC5 (ENSAMXG00000039163) zgc:92242 (ENSAMXG00000030327) ENSAMXG00000018864 ENSAMXG00000035215 trpc3 (ENSAMXG00000018867) Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 476 hars (ENSPNAG00000013338) #22 dnd1 (ENSPNAG00000013275) #20 gfra3 (ENSPNAG00000002662) SCGN (ENSPNAG00000013254) CARMIL1 (ENSPNAG00000013225) ENSPNAG00000013193 ENPP2 (ENSPNAG00000002597) Red-bellied piranha MODERN SPECIES 2484 ENSPNAG00000014650 #22 Euteleosteomorpha ANCESTRAL SPECIES 107 ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00390000002932 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00940000157090.g ENSGT00390000008183 ENSGT00390000004827 ENSGT00940000160288 ENSGT00390000008828.fb.a ENSGT00940000156526.b ENSGT00510000050125.a ENSGT00940000159799 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a Acanthomorphata ANCESTRAL SPECIES 153 ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00940000157090.g ENSGT00390000008183 ENSGT00390000004827 ENSGT00940000160288 ENSGT00390000008828.fb.a ENSGT00940000156526.b ENSGT00940000159799 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a Euacanthomorphacea ANCESTRAL SPECIES 63 ENSGT00940000154953.a ENSGT00940000155249.h ENSGT00940000166427 ENSGT00940000156295.h ENSGT00980000198976 ENSGT01030000234904 ENSGT00940000158277.a ENSGT00940000158457 ENSGT00520000055589.d.a.a ENSGT00520000055589.d.b ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000159799 ENSGT00990000205617 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00510000047951 ENSGT00940000178312 ENSGT00940000153909.b ENSGT01030000234957 ENSGT00940000153700 ENSGT00390000013163 ENSGT00390000012030.b.a ENSGT00390000008738 Percomorphaceae ANCESTRAL SPECIES 122 ENSGT00990000205617 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00510000047951 ENSGT00940000178312 ENSGT00940000153909.b Tiger tail seahorse MODERN SPECIES 136 tipin (ENSHCOG00000005560) lctla (ENSHCOG00000005554) crybgx (ENSHCOG00000005524) cars1 (ENSHCOG00000005493) pex16 (ENSHCOG00000005418) arfgap2 (ENSHCOG00000005405) ppfia1 (ENSHCOG00000005363) ENSHCOG00000005335 ENSHCOG00000000154 ENSHCOG00000005320 NOCT (ENSHCOG00000005299) ENSHCOG00000005297 ENSHCOG00000005295 ENSHCOG00000005292 ENSHCOG00000005287 hars (ENSHCOG00000005282) #22 ENSHCOG00000005246 ENSHCOG00000005232 Percomorphaceae_B ANCESTRAL SPECIES 14 ENSGT00940000158825.d ENSGT00940000158277.a ENSGT01030000234904 ENSGT00980000198976 ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000159799 ENSGT00940000156526.b ENSGT00390000008828.fb.a Ovalentaria ANCESTRAL SPECIES 15 ENSGT00390000002313 ENSGT00940000158825.d ENSGT00980000198976 ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000175226 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000179542 ENSGT00940000177970 Atherinomorphae ANCESTRAL SPECIES 9 ENSGT00390000008738 ENSGT00390000009871 ENSGT00980000198976 ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000175226 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000177970 ENSGT00940000159799 Cyprinodontiformes ANCESTRAL SPECIES 8 ENSGT00390000009871 ENSGT00390000002313 ENSGT00390000008738 ENSGT00980000198976 ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00990000203833 ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000159799 ENSGT00940000156526.b ENSGT00390000008828.fb.a Aplocheiloidei ANCESTRAL SPECIES 69 ENSGT00390000009871 ENSGT00390000002313 ENSGT00390000008738 ENSGT00980000198976 ENSGT00940000158277.a ENSGT00390000013163 ENSGT00390000012030.b.a ENSGT00940000158457 ENSGT00940000156295.h ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00990000203833 ENSGT00940000170279 ENSGT00940000175899 ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000159063 ENSGT00940000153232.a.b.b ENSGT00390000015511 ENSGT00940000154508.a.a.s.b ENSGT00940000157929 ENSGT00920000149138 ENSGT00390000016876 ENSGT00950000183097.a.a.a.f.a.b ENSGT00940000155374.g.b ENSGT00940000163551.i.a ENSGT00950000182856.a.a.b ENSGT00940000177201 ENSGT01090000260076.b.a ENSGT00940000163421.a.d.b Mangrove rivulus MODERN SPECIES 470 NOCT (ENSKMAG00000001493) ENSKMAG00000001501 ENSKMAG00000001518 ENSKMAG00000001531 ENSKMAG00000001544 mlsl (ENSKMAG00000001557) hars (ENSKMAG00000001608) #22 ENSKMAG00000001707 #20 Turquoise killifish MODERN SPECIES 1610 ENSNFUG00015014932 pcdh10b (ENSNFUG00015014957) FBXO38 (ENSNFUG00015014992) MAGT1 (ENSNFUG00015015216) ENSNFUG00015015798 ENSNFUG00015015802 ENSNFUG00015015805 ENSNFUG00015015808 pcdh18b (ENSNFUG00015015812) CCRN4L (ENSNFUG00015015817) ENSNFUG00015015823 ENSNFUG00015015831 ENSNFUG00015015833 ENSNFUG00015015840 mlsl (ENSNFUG00015015865) HARS (ENSNFUG00015016034) #22 SLC7A11 (ENSNFUG00015016832) SLITRK4 (ENSNFUG00015016929) ENSNFUG00015016934 ENSNFUG00015016936 ENSNFUG00015016950 ENSNFUG00015016956 ENSNFUG00015016959 ENSNFUG00015000040 irf2 (ENSNFUG00015000042) CASP3 (ENSNFUG00015000043) ENSNFUG00015000044 st3gal5 (ENSNFUG00015000045) ENSNFUG00015000046 ENSNFUG00015000048 PTCD3 (ENSNFUG00015000051) Cyprinodontoidei ANCESTRAL SPECIES 19 ENSGT00390000002313 ENSGT00390000008738 ENSGT00980000198976 ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000159799 ENSGT00940000156526.b ENSGT00390000008828.fb.a NAME_4 ANCESTRAL SPECIES 347 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 Mummichog MODERN SPECIES 736 NOCT (ENSFHEG00000005067) elf2a (ENSFHEG00000005055) ENSFHEG00000004977 ENSFHEG00000004954 naa15a (ENSFHEG00000004933) mlsl (ENSFHEG00000004832) hars (ENSFHEG00000004792) #22 ENSFHEG00000000128 #20 Sheepshead minnow MODERN SPECIES 797 ENSCVAG00000001750 ENSCVAG00000001836 ENSCVAG00000001850 NOCT (ENSCVAG00000001857) ENSCVAG00000001866 ENSCVAG00000001872 ENSCVAG00000001875 ENSCVAG00000001879 mlsl (ENSCVAG00000001889) hars (ENSCVAG00000001911) #22 dnd1 (ENSCVAG00000001991) #20 Poeciliinae ANCESTRAL SPECIES 11 ENSGT00390000009871 ENSGT00390000002313 ENSGT00390000008738 ENSGT00980000198976 ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000159799 ENSGT00940000156526.b ENSGT00390000008828.fb.a Poecilia ANCESTRAL SPECIES 113 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a NAME_6 ANCESTRAL SPECIES 416 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 Amazon molly MODERN SPECIES 647 NOCT (ENSPFOG00000004800) elf2a (ENSPFOG00000004830) ENSPFOG00000024803 naa15a (ENSPFOG00000004910) mlsl (ENSPFOG00000022483) mlsl (ENSPFOG00000005213) hars (ENSPFOG00000005415) #22 dnd1 (ENSPFOG00000005620) #20 ENSPFOG00000023359 ENSPFOG00000022288 ENSPFOG00000005652 ENSPFOG00000005668 ENSPFOG00000022824 gfra3 (ENSPFOG00000005683) Sailfin molly MODERN SPECIES 2873 hars (ENSPLAG00000002199) #22 dnd1 (ENSPLAG00000002152) #20 Guppy MODERN SPECIES 440 ENSPREG00000007030 nsdhl (ENSPREG00000007018) fut11 (ENSPREG00000006989) RAB9B (ENSPREG00000006970) plp1a (ENSPREG00000006947) pcdh20 (ENSPREG00000006932) si:dkey-27i16.2 (ENSPREG00000006921) nlgn3a (ENSPREG00000006911) ENSPREG00000006891 NOCT (ENSPREG00000006876) ENSPREG00000006863 ENSPREG00000006849 ENSPREG00000006839 naa15a (ENSPREG00000006781) mlsl (ENSPREG00000006745) hars (ENSPREG00000006703) #22 ENSPREG00000006548 #20 gfra3 (ENSPREG00000006502) ENSPREG00000006496 LRRTM2 (ENSPREG00000006483) ctnna1 (ENSPREG00000006377) ENSPREG00000006355 tspan17 (ENSPREG00000006323) ENSPREG00000006301 dctn4 (ENSPREG00000006250) ENSPREG00000006230 gpx3 (ENSPREG00000006217) tnip1 (ENSPREG00000006127) anxa6 (ENSPREG00000006058) ENSPREG00000006036 ENSPREG00000005994 Platyfish MODERN SPECIES 15 ENSXMAG00000001331 ENSXMAG00000024893 pcdh10b (ENSXMAG00000023159) ENSXMAG00000021274 pcdh18b (ENSXMAG00000016798) ENSXMAG00000010874 ENSXMAG00000028580 NOCT (ENSXMAG00000029143) ENSXMAG00000029890 ENSXMAG00000024001 ENSXMAG00000010916 ENSXMAG00000028309 ENSXMAG00000024387 naa15a (ENSXMAG00000010918) mlsl (ENSXMAG00000010936) hars (ENSXMAG00000010938) #22 dnd1 (ENSXMAG00000017784) #20 gfra3 (ENSXMAG00000026622) zgc:153146 (ENSXMAG00000010953) hvcn1 (ENSXMAG00000010956) ENSXMAG00000010962 nkx1.2lb (ENSXMAG00000017541) uvssa (ENSXMAG00000010972) ENSXMAG00000010975 spdl1 (ENSXMAG00000010982) trappc11 (ENSXMAG00000010987) ENSXMAG00000023092 ENSXMAG00000011012 ENSXMAG00000004692 ENSXMAG00000028685 SCOC (ENSXMAG00000015437) Oryzias ANCESTRAL SPECIES 37 ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000006413 ENSGT00390000012030.b.a ENSGT00940000161151 ENSGT00390000013284 ENSGT00390000002414 ENSGT00390000014635.d ENSGT00940000158457 ENSGT00520000055589.d.a.a ENSGT00980000199752 ENSGT00940000153700 ENSGT00390000009871 ENSGT00390000008738 ENSGT00390000002313 Oryzias_b ANCESTRAL SPECIES 23 ENSGT00940000156736.c.a ENSGT00740000115581.f ENSGT00940000160999 ENSGT00940000159900 ENSGT00940000157061.a ENSGT00940000153203.B ENSGT00950000183123 ENSGT00940000167175.a ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT01090000261097 ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000006413 ENSGT00390000012030.b.a ENSGT00940000161151 ENSGT00390000013284 ENSGT00390000002414 ENSGT00390000014635.d ENSGT00940000158457 ENSGT00520000055589.d.a.a ENSGT00980000199752 ENSGT00940000153700 ENSGT00390000009871 ENSGT00390000008738 ENSGT00390000002313 Indian medaka MODERN SPECIES 16 slit3 (ENSOMEG00000012015) fgfrl1a (ENSOMEG00000011920) ENSOMEG00000011856 ENSOMEG00000011827 spon2b (ENSOMEG00000011816) zgc:136929 (ENSOMEG00000011793) maea (ENSOMEG00000011733) ENSOMEG00000011670 KLHL3 (ENSOMEG00000011648) fam13b (ENSOMEG00000011594) cxcl14 (ENSOMEG00000011511) LINGO2 (ENSOMEG00000011496) eif4ea (ENSOMEG00000011486) ENSOMEG00000011471 mlsl (ENSOMEG00000011463) hars (ENSOMEG00000011434) #22 dnd1 (ENSOMEG00000011374) #20 gfra3 (ENSOMEG00000011363) ENSOMEG00000011350 FBXO38 (ENSOMEG00000011335) rnf103 (ENSOMEG00000011292) magt1 (ENSOMEG00000011253) ENSOMEG00000011116 csnk1a1 (ENSOMEG00000011213) tmem129 (ENSOMEG00000011099) igbp1 (ENSOMEG00000011062) abhd18 (ENSOMEG00000011045) enpp6 (ENSOMEG00000011026) STOX2 (ENSOMEG00000010994) ENSOMEG00000010971 ENSOMEG00000010940 Javanese ricefish MODERN SPECIES 1 fgfrl1a (ENSOJAG00000016722) ENSOJAG00000016732 ENSOJAG00000016737 spon2b (ENSOJAG00000016747) zgc:136929 (ENSOJAG00000016765) maea (ENSOJAG00000016904) ENSOJAG00000016953 ENSOJAG00000016962 KLHL3 (ENSOJAG00000016974) fam13b (ENSOJAG00000017074) cxcl14 (ENSOJAG00000017121) LINGO2 (ENSOJAG00000017155) eif4ea (ENSOJAG00000017163) ENSOJAG00000017175 mlsl (ENSOJAG00000017188) hars (ENSOJAG00000017365) #22 dnd1 (ENSOJAG00000017775) #20 gfra3 (ENSOJAG00000017863) rnf103 (ENSOJAG00000017970) ENSOJAG00000018053 tmem129 (ENSOJAG00000018057) igbp1 (ENSOJAG00000018068) abhd18 (ENSOJAG00000018082) enpp6 (ENSOJAG00000018146) STOX2 (ENSOJAG00000018218) ENSOJAG00000018248 csnk1a1 (ENSOJAG00000018263) ENSOJAG00000018349 ENSOJAG00000018410 immt (ENSOJAG00000018422) ENSOJAG00000018477 Oryzias_a ANCESTRAL SPECIES 19 ENSGT01050000244840.A.b.a ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000002781 ENSGT00390000010318 ENSGT00390000011725.c ENSGT00530000063506.A ENSGT00950000183132.C ENSGT00730000111223 ENSGT00940000154518.a ENSGT01050000244965.b ENSGT00940000158366 ENSGT00940000156627.a ENSGT00390000006915.d.j.b ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000006413 ENSGT00390000012030.b.a ENSGT00940000161151 ENSGT00390000013284 ENSGT00390000002414 ENSGT00390000014635.d ENSGT00940000158457 ENSGT00520000055589.d.a.a ENSGT00980000199752 ENSGT00940000153700 ENSGT00390000009871 ENSGT00390000008738 ENSGT00390000002313 Japanese Medaka HdrR MODERN SPECIES 1 TBC1D9B (ENSORLG00000020564) sqstm1 (ENSORLG00000020572) ENSORLG00000030157 ENSORLG00000020573 selenot2 (ENSORLG00000020575) COX18 (ENSORLG00000020576) polr2b (ENSORLG00000020579) gar1 (ENSORLG00000020583) ENSORLG00000029194 pitx2 (ENSORLG00000020587) elovl6 (ENSORLG00000020593) egf (ENSORLG00000020598) lrit3a (ENSORLG00000020599) gpm6aa (ENSORLG00000024472) mlsl (ENSORLG00000020604) hars (ENSORLG00000020605) #22 dnd1 (ENSORLG00000025449) #20 gfra3 (ENSORLG00000020608) FBXO38 (ENSORLG00000020610) ENSORLG00000023176 rnf103 (ENSORLG00000025144) magt1 (ENSORLG00000020616) ENSORLG00000029142 tmem129 (ENSORLG00000020619) igbp1 (ENSORLG00000025316) abhd18 (ENSORLG00000020624) enpp6 (ENSORLG00000020628) ENSORLG00000020633 ENSORLG00000025809 csnk1a1 (ENSORLG00000020637) ENSORLG00000024082 Chinese medaka MODERN SPECIES 815 hvcn1 (ENSOSIG00000022426) F2RL3 (ENSOSIG00000022433) rnf130 (ENSOSIG00000022437) ENSOSIG00000022439 ENSOSIG00000022442 selenot2 (ENSOSIG00000022444) COX18 (ENSOSIG00000022446) polr2b (ENSOSIG00000022471) gar1 (ENSOSIG00000022488) PITX2 (ENSOSIG00000022491) elovl6 (ENSOSIG00000022492) ENSOSIG00000022493 lrit3a (ENSOSIG00000022496) gpm6aa (ENSOSIG00000022506) mlsl (ENSOSIG00000022526) hars (ENSOSIG00000022541) #22 dnd1 (ENSOSIG00000022564) #20 Ovalentaria_B ANCESTRAL SPECIES 41 ENSGT00980000198976 ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000177596 ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000175226 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000179542 ENSGT00940000177970 Pomacentridae ANCESTRAL SPECIES 58 ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00990000203833 ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a.f ENSGT00940000165282.a.e ENSGT00940000159403 ENSGT00570000079101.a.b.c ENSGT00940000177596 ENSGT00570000079101.a.b.d ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00980000198740 ENSGT00940000177647 Pomacentridae_A ANCESTRAL SPECIES 60 ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a.f ENSGT00940000165282.a.e ENSGT00940000159403 ENSGT00570000079101.a.b.c ENSGT00940000177596 ENSGT00570000079101.a.b.d ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00940000160403 ENSGT00390000003288 ENSGT00980000198740 ENSGT00940000177647 ENSGT00940000158129 Amphiprion ANCESTRAL SPECIES 86 ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a.f ENSGT00940000159403 ENSGT00570000079101.a.b.c ENSGT00940000177596 ENSGT00570000079101.a.b.d ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00940000160403 ENSGT01100000263513.a.a.b.b.b.b.a.a.b.b.b.h ENSGT00390000003288 ENSGT00980000198740 ENSGT00940000177647 ENSGT00940000158129 Orange clownfish MODERN SPECIES 4 ENSAPEG00000004095 ENSAPEG00000004063 ENSAPEG00000004032 NFKB1 (ENSAPEG00000004000) ENSAPEG00000003941 ENSAPEG00000003875 ENSAPEG00000003849 ENSAPEG00000003827 ENSAPEG00000003791 ENSAPEG00000003779 neurog1 (ENSAPEG00000003773) ENSAPEG00000003740 ldhd (ENSAPEG00000003712) ENSAPEG00000003686 mlsl (ENSAPEG00000003627) hars (ENSAPEG00000003586) #22 dnd1 (ENSAPEG00000003554) #20 gfra3 (ENSAPEG00000003517) hvcn1 (ENSAPEG00000003497) ENSAPEG00000003484 ENSAPEG00000003478 nkx1.2lb (ENSAPEG00000003459) ENSAPEG00000003451 uvssa (ENSAPEG00000003434) SIL1 (ENSAPEG00000003396) PCDH12 (ENSAPEG00000003389) ENSAPEG00000003350 gm2a (ENSAPEG00000003318) ENSAPEG00000003257 ENSAPEG00000003233 thoc3 (ENSAPEG00000003216) Clown anemonefish MODERN SPECIES 1082 mlsl (ENSAOCG00000008950) hars (ENSAOCG00000009021) #22 dnd1 (ENSAOCG00000009051) #20 Spiny chromis MODERN SPECIES 2425 mlsl (ENSAPOG00000002334) hars (ENSAPOG00000002290) #22 ENSAPOG00000002240 Bicolor damselfish MODERN SPECIES 876 NOCT (ENSSPAG00000023537) ENSSPAG00000023536 elf2a (ENSSPAG00000023531) ENSSPAG00000023529 ENSSPAG00000023527 naa15a (ENSSPAG00000023526) mlsl (ENSSPAG00000023524) hars (ENSSPAG00000023522) #22 dnd1 (ENSSPAG00000023520) #20 gfra3 (ENSSPAG00000023518) Cichlidae ANCESTRAL SPECIES 73 ENSGT00940000154953.a ENSGT00990000203833 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00990000205617 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00940000161248 ENSGT00920000149123.d ENSGT00940000157090.g ENSGT00390000008183 ENSGT00390000004827 ENSGT00940000160288 ENSGT00390000008828.fb.a ENSGT00940000156526.b ENSGT00940000159799 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00940000175226 ENSGT00390000006550 Pseudocrenilabrinae ANCESTRAL SPECIES 41 ENSGT00390000006413 ENSGT00390000012030.b.a ENSGT00390000002414 ENSGT00390000013163 ENSGT00940000153700 ENSGT01030000234957 ENSGT00520000055589.d.a.a ENSGT00940000158457 ENSGT00940000154953.a ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00990000205617 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000179805 ENSGT00510000049866.g.a.a.a ENSGT00940000157090.g ENSGT00390000008183 ENSGT00390000004827 ENSGT00940000160288 ENSGT00390000008828.fb.a ENSGT00940000156526.b ENSGT00940000159799 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00940000175226 ENSGT00390000006550 ENSGT00510000047951 Nile tilapia MODERN SPECIES 11 ENSONIG00000043068 naa15a (ENSONIG00000011538) mlsl (ENSONIG00000011547) ENSONIG00000037440 ENSONIG00000037021 ENSONIG00000035619 ENSONIG00000032092 pde6a (ENSONIG00000004214) SLC26A2 (ENSONIG00000004222) ENSONIG00000037809 ENSONIG00000039130 HTR4 (ENSONIG00000004225) SLITRK2 (ENSONIG00000021252) hspa9 (ENSONIG00000004081) ENSONIG00000028405 hars (ENSONIG00000011548) #22 ENSONIG00000038275 dnd1 (ENSONIG00000035317) #20 gfra3 (ENSONIG00000042785) ENSONIG00000040678 ENSONIG00000039812 ENSONIG00000034918 rab33ba (ENSONIG00000011559) zgc:113425 (ENSONIG00000011560) setd7 (ENSONIG00000011561) mgst2 (ENSONIG00000011563) SCOC (ENSONIG00000031813) zgc:154054 (ENSONIG00000011565) ENSONIG00000011573 ENSONIG00000011578 ENSONIG00000030023 Pseudocrenilabrinae_A ANCESTRAL SPECIES 48 ENSGT00390000006413 ENSGT00390000012030.b.a ENSGT00390000002414 ENSGT00390000013163 ENSGT00940000153700 ENSGT01030000234957 ENSGT00520000055589.d.a.a ENSGT00940000158457 ENSGT00940000154953.a ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00990000205617 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000179805 ENSGT00510000049866.g.a.a.a ENSGT00940000157090.g ENSGT00390000008183 ENSGT00390000004827 ENSGT00940000160288 ENSGT00390000008828.fb.a ENSGT00940000156526.b ENSGT00940000159799 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00940000175226 ENSGT00390000006550 ENSGT00510000047951 Haplochromini ANCESTRAL SPECIES 25 ENSGT00390000014635 ENSGT00390000006413 ENSGT00390000012030.b.a ENSGT00390000002414 ENSGT00390000013163 ENSGT00940000153700 ENSGT01030000234957 ENSGT00520000055589.d.a.a ENSGT00940000158457 ENSGT00940000154953.a ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00510000049866.g.a.a.a ENSGT00940000157090.g ENSGT00390000008183 ENSGT00390000004827 ENSGT00940000160288 ENSGT00390000008828.fb.a ENSGT00940000156526.b ENSGT00940000159799 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00390000006550 ENSGT00510000047951 ENSGT00940000153909.b Burton s mouthbrooder MODERN SPECIES 702 ENSHBUG00000003281 abhd18 (ENSHBUG00000003275) rnf103 (ENSHBUG00000003231) magt1 (ENSHBUG00000003200) FBXO38 (ENSHBUG00000003179) csnk1a1 (ENSHBUG00000003142) ENSHBUG00000003099 STOX2 (ENSHBUG00000003075) enpp6 (ENSHBUG00000003067) ENSHBUG00000003038 ENSHBUG00000003026 ENSHBUG00000003016 naa15a (ENSHBUG00000002981) ENSHBUG00000002947 mlsl (ENSHBUG00000002911) hars (ENSHBUG00000002787) #22 Haplochromini_A ANCESTRAL SPECIES 28 ENSGT00390000006413 ENSGT00390000012030.b.a ENSGT00390000002414 ENSGT00390000013163 ENSGT00940000153700 ENSGT01030000234957 ENSGT00520000055589.d.a.a ENSGT00940000158457 ENSGT00940000154953.a ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000020792.F.e ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00510000049866.g.a.a.a ENSGT00940000157090.g ENSGT00390000008183 ENSGT00390000004827 ENSGT00940000160288 ENSGT00390000008828.fb.a ENSGT00940000156526.b ENSGT00940000159799 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00390000006550 ENSGT00510000047951 ENSGT00940000153909.b P. nyererei MODERN SPECIES 624 STOX2 (ENSPNYG00000016979) enpp6 (ENSPNYG00000017117) ENSPNYG00000017252 ENSPNYG00000017301 ENSPNYG00000017341 ENSPNYG00000017373 naa15a (ENSPNYG00000017440) ENSPNYG00000017666 mlsl (ENSPNYG00000017738) hars (ENSPNYG00000017946) #22 dnd1 (ENSPNYG00000018115) #20 gfra3 (ENSPNYG00000018241) Haplochromini_B ANCESTRAL SPECIES 68 ENSGT00940000161151 ENSGT00390000014635 ENSGT00390000006413 ENSGT00390000012030.b.a ENSGT00390000002414 ENSGT00390000013163 ENSGT00940000153700 ENSGT01030000234957 ENSGT00520000055589.d.a.a ENSGT00940000158457 ENSGT00940000154953.a ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000020792.F.e ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT01100000263636.c.a.a ENSGT00510000049866.g.a.a.a ENSGT00940000157090.g ENSGT00390000008183 ENSGT00390000004827 ENSGT00940000160288 ENSGT00390000008828.fb.a ENSGT00940000156526.b ENSGT00940000159799 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00390000006550 ENSGT00510000047951 Eastern happy MODERN SPECIES 11 ENSACLG00000006995 abhd18 (ENSACLG00000006974) rnf103 (ENSACLG00000006946) magt1 (ENSACLG00000006930) igbp1 (ENSACLG00000006914) FBXO38 (ENSACLG00000006846) csnk1a1 (ENSACLG00000006794) ENSACLG00000006792 ENSACLG00000006783 STOX2 (ENSACLG00000006760) enpp6 (ENSACLG00000006744) ENSACLG00000006740 ENSACLG00000006642 naa15a (ENSACLG00000006578) mlsl (ENSACLG00000006518) hars (ENSACLG00000006420) #22 ENSACLG00000006400 dnd1 (ENSACLG00000006388) #20 gfra3 (ENSACLG00000006382) ENSACLG00000005747 ENSACLG00000005732 ENSACLG00000005729 ENSACLG00000005724 rab33ba (ENSACLG00000005720) zgc:113425 (ENSACLG00000005704) setd7 (ENSACLG00000005686) mgst2 (ENSACLG00000005667) zgc:154054 (ENSACLG00000005382) ENSACLG00000004555 ENSACLG00000004492 ENSACLG00000004473 Zebra mbuna MODERN SPECIES 1102 ENSMZEG00005017274 abhd18 (ENSMZEG00005017279) rnf103 (ENSMZEG00005017289) magt1 (ENSMZEG00005017296) igbp1 (ENSMZEG00005017300) FBXO38 (ENSMZEG00005017310) csnk1a1 (ENSMZEG00005017333) ENSMZEG00005017343 STOX2 (ENSMZEG00005017346) enpp6 (ENSMZEG00005017351) ENSMZEG00005017353 ENSMZEG00005017360 naa15a (ENSMZEG00005017368) ENSMZEG00005017388 mlsl (ENSMZEG00005017393) hars (ENSMZEG00005017419) #22 ENSMZEG00005017434 dnd1 (ENSMZEG00005017442) #20 gfra3 (ENSMZEG00005017454) ENSMZEG00005017462 pcdh18b (ENSMZEG00005017468) ENSMZEG00005017476 ENSMZEG00005017482 ENSMZEG00005017486 ENSMZEG00005017495 ENSMZEG00005017524 ENSMZEG00005017557 ENSMZEG00005017562 trappc11 (ENSMZEG00005017572) spdl1 (ENSMZEG00005017607) ENSMZEG00005017613 Lyretail cichlid MODERN SPECIES 396 tmem129 (ENSNBRG00000006116) ENSNBRG00000006151 abhd18 (ENSNBRG00000006156) rnf103 (ENSNBRG00000006192) magt1 (ENSNBRG00000006224) igbp1 (ENSNBRG00000006269) FBXO38 (ENSNBRG00000006321) csnk1a1 (ENSNBRG00000006478) STOX2 (ENSNBRG00000006526) enpp6 (ENSNBRG00000006546) ENSNBRG00000006572 ENSNBRG00000006598 NAA15 (ENSNBRG00000006656) mlsl (ENSNBRG00000006967) ENSNBRG00000007012 hars (ENSNBRG00000007020) #22 dnd1 (ENSNBRG00000007036) #20 ENSNBRG00000007058 rab33ba (ENSNBRG00000007077) zgc:113425 (ENSNBRG00000007089) ENSNBRG00000007106 setd7 (ENSNBRG00000007120) mgst2 (ENSNBRG00000007130) SCOC (ENSNBRG00000007136) zgc:154054 (ENSNBRG00000007144) ENSNBRG00000007200 ENSNBRG00000007382 ENSNBRG00000007409 ENSNBRG00000007421 trappc11 (ENSNBRG00000007442) Midas cichlid MODERN SPECIES 471 ENSACIG00000015835 gas1a (ENSACIG00000015819) tars1 (ENSACIG00000015719) TMEM8B (ENSACIG00000015679) mccc2 (ENSACIG00000015634) ENSACIG00000015583 psat1 (ENSACIG00000015560) elf2a (ENSACIG00000015521) ENSACIG00000015511 mgarpa (ENSACIG00000015492) ENSACIG00000015478 naa15a (ENSACIG00000015432) mlsl (ENSACIG00000015399) ENSACIG00000015388 hars (ENSACIG00000015362) #22 Percomorphaceae_C ANCESTRAL SPECIES 16 ENSGT00520000055589.d.a.a ENSGT00940000158457 ENSGT00940000158277.a ENSGT00980000198976 ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00940000178312 ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000159799 ENSGT00940000156526.b Percomorphaceae_D ANCESTRAL SPECIES 25 ENSGT00940000158277.a ENSGT00980000198976 ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00940000178312 ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000159799 ENSGT00940000156526.b Carangaria ANCESTRAL SPECIES 15 ENSGT00940000159063 ENSGT00940000160971 ENSGT00940000161248 ENSGT00920000149123.d ENSGT00940000158277.a ENSGT00980000198976 ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00940000178312 ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B.f ENSGT00940000159799 ENSGT00940000156526.b Pleuronectoidei ANCESTRAL SPECIES 68 ENSGT00920000149123.d ENSGT00940000158277.a ENSGT00980000198976 ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B.e.a ENSGT00940000156526.b ENSGT00390000008828.fb.a ENSGT00390000004827 Turbot MODERN SPECIES 4 pcdh10b (ENSSMAG00000015331) ENSSMAG00000025573 ENSSMAG00000023668 PCDH18 (ENSSMAG00000015194) ENSSMAG00000015148 ENSSMAG00000015121 NOCT (ENSSMAG00000026688) ENSSMAG00000027231 ENSSMAG00000015081 ENSSMAG00000015071 ENSSMAG00000015060 ENSSMAG00000015023 ENSSMAG00000015007 naa15a (ENSSMAG00000014932) mlsl (ENSSMAG00000014877) hars (ENSSMAG00000014813) #22 ENSSMAG00000014775 #20 gfra3 (ENSSMAG00000014770) ENSSMAG00000014735 ENSSMAG00000014711 ENSSMAG00000014691 ENSSMAG00000023525 ENSSMAG00000015468 ENSSMAG00000015496 ENSSMAG00000015566 SPDL1 (ENSSMAG00000015592) ENSSMAG00000015712 ENSSMAG00000015843 ENSSMAG00000037545 ENSSMAG00000035402 ENSSMAG00000015878 Tongue sole MODERN SPECIES 6 ENSCSEG00000001936 SLITRK4 (ENSCSEG00000001931) AQP1 (ENSCSEG00000001928) ENSCSEG00000001926 ENSCSEG00000001924 ENSCSEG00000001920 ENSCSEG00000001917 hspa9 (ENSCSEG00000001908) ENSCSEG00000001904 ENSCSEG00000001897 SLITRK2 (ENSCSEG00000001894) ENSCSEG00000001879 pacrg (ENSCSEG00000001872) mlsl (ENSCSEG00000001859) ENSCSEG00000001855 hars (ENSCSEG00000001835) #22 ENSCSEG00000001828 #20 gla (ENSCSEG00000001824) ENSCSEG00000001822 Carangaria_A ANCESTRAL SPECIES 22 ENSGT00940000159063 ENSGT00940000160971 ENSGT00940000161248 ENSGT00920000149123.d ENSGT00980000198976 ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00940000178312 ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B.f ENSGT00940000159799 ENSGT00940000156526.b Barramundi perch MODERN SPECIES 133 ENSLCAG00010013303 pcdh18b (ENSLCAG00010013309) ENSLCAG00010013314 ENSLCAG00010013334 NOCT (ENSLCAG00010013381) elf2a (ENSLCAG00010013385) ENSLCAG00010013391 ENSLCAG00010013402 naa15a (ENSLCAG00010013694) mlsl (ENSLCAG00010014561) hars (ENSLCAG00010014666) #22 dnd1 (ENSLCAG00010015188) #20 ENSLCAG00010015189 gfra3 (ENSLCAG00010015191) zgc:153146 (ENSLCAG00010015196) ENSLCAG00010015199 hvcn1 (ENSLCAG00010015206) nkx1.2lb (ENSLCAG00010015216) uvssa (ENSLCAG00010015221) ENSLCAG00010015229 spdl1 (ENSLCAG00010015230) trappc11 (ENSLCAG00010015254) ENSLCAG00010015296 SLITRK2 (ENSLCAG00010015300) Seriola ANCESTRAL SPECIES 101 ENSGT00390000013163 ENSGT00390000002414 ENSGT00390000012030.b.a ENSGT00390000014635 ENSGT00390000006413 ENSGT00940000161151 ENSGT00390000013284 ENSGT00390000009871 ENSGT00390000008738 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00940000178312 ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B.f ENSGT00940000159799 ENSGT00390000008828.fb.a Greater amberjack MODERN SPECIES 91 igbp1 (ENSSDUG00000000628) magt1 (ENSSDUG00000000634) abhd18 (ENSSDUG00000000672) rnf103 (ENSSDUG00000000751) ENSSDUG00000000790 tmem129 (ENSSDUG00000000800) ENSSDUG00000000841 ENSSDUG00000000855 ENSSDUG00000000858 NOCT (ENSSDUG00000000870) elf2a (ENSSDUG00000000884) ENSSDUG00000000900 ENSSDUG00000000916 naa15a (ENSSDUG00000000929) mlsl (ENSSDUG00000001034) hars (ENSSDUG00000001088) #22 dnd1 (ENSSDUG00000001174) #20 ENSSDUG00000001196 gfra3 (ENSSDUG00000001216) zgc:153146 (ENSSDUG00000001249) hvcn1 (ENSSDUG00000001325) ENSSDUG00000001334 nkx1.2lb (ENSSDUG00000001348) uvssa (ENSSDUG00000001375) ENSSDUG00000001408 spdl1 (ENSSDUG00000001463) trappc11 (ENSSDUG00000001508) rell2 (ENSSDUG00000001628) ENSSDUG00000001647 ENSSDUG00000001667 SCOC (ENSSDUG00000001675) Yellowtail amberjack MODERN SPECIES 2970 FBXO38 (ENSSLDG00000007253) igbp1 (ENSSLDG00000007301) magt1 (ENSSLDG00000007327) abhd18 (ENSSLDG00000007391) rnf103 (ENSSLDG00000007423) ENSSLDG00000007452 tmem129 (ENSSLDG00000007481) ENSSLDG00000007530 ENSSLDG00000007554 NOCT (ENSSLDG00000007584) elf2a (ENSSLDG00000007600) ENSSLDG00000007624 ENSSLDG00000007649 naa15a (ENSSLDG00000007695) mlsl (ENSSLDG00000007766) hars (ENSSLDG00000007832) #22 dnd1 (ENSSLDG00000007909) #20 gfra3 (ENSSLDG00000008045) zgc:153146 (ENSSLDG00000008079) hvcn1 (ENSSLDG00000008191) ENSSLDG00000008216 nkx1.2lb (ENSSLDG00000008242) uvssa (ENSSLDG00000008254) ENSSLDG00000008287 ENSSLDG00000008304 spdl1 (ENSSLDG00000008318) trappc11 (ENSSLDG00000008343) ENSSLDG00000008400 ENSSLDG00000008412 ENSSLDG00000008433 ENSSLDG00000008485 Anabantaria ANCESTRAL SPECIES 37 ENSGT00520000055589.d.b ENSGT00520000055589.d.a.a ENSGT00940000158457 ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00990000203833 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000159799 ENSGT00940000156526.b ENSGT00390000008828.fb.a Anabantoidei ANCESTRAL SPECIES 11 ENSGT00940000158457 ENSGT00520000055589.d.a.a ENSGT00940000153700 ENSGT00390000013163 ENSGT00390000012030.b.a ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00990000203833 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000159799 ENSGT00940000156526.b ENSGT00390000008828.fb.a Climbing perch MODERN SPECIES 1 ENSATEG00000027132 ENSATEG00000000255 ENSATEG00000015424 ENSATEG00000000271 ENSATEG00000015393 pcdh10b (ENSATEG00000015437) PCDH18 (ENSATEG00000015463) ENSATEG00000002739 ENSATEG00000015518 NOCT (ENSATEG00000015612) ENSATEG00000025513 ENSATEG00000015617 ENSATEG00000030067 NAA15 (ENSATEG00000015667) mlsl (ENSATEG00000015725) hars (ENSATEG00000015770) #22 ENSATEG00000015824 #20 gfra3 (ENSATEG00000015833) ENSATEG00000015846 ENSATEG00000015867 ENSATEG00000015872 ENSATEG00000015901 ENSATEG00000015919 ENSATEG00000015954 ENSATEG00000015963 ENSATEG00000015983 ENSATEG00000016017 ENSATEG00000016099 ENSATEG00000016148 ENSATEG00000016206 ENSATEG00000016220 Siamese fighting fish MODERN SPECIES 1 enpp6 (ENSBSLG00000008280) STOX2 (ENSBSLG00000008507) csnk1a1 (ENSBSLG00000008533) FBXO38 (ENSBSLG00000008997) magt1 (ENSBSLG00000009165) pcdh10b (ENSBSLG00000009310) pcdh18b (ENSBSLG00000009333) ENSBSLG00000009361 ENSBSLG00000009623 NOCT (ENSBSLG00000009644) elf2a (ENSBSLG00000009649) ENSBSLG00000009685 ENSBSLG00000009728 naa15a (ENSBSLG00000009789) mlsl (ENSBSLG00000010002) hars (ENSBSLG00000010095) #22 ENSBSLG00000010300 #20 gfra3 (ENSBSLG00000010612) ENSBSLG00000010680 ENSBSLG00000010699 ENSBSLG00000010714 il1rapl2 (ENSBSLG00000010846) ENSBSLG00000011007 zgc:194679 (ENSBSLG00000011014) ENSBSLG00000011034 ENSBSLG00000011166 hdac3 (ENSBSLG00000011189) ENSBSLG00000011238 ENSBSLG00000011248 rab33a (ENSBSLG00000011275) fmr1 (ENSBSLG00000011283) Zig-zag eel MODERN SPECIES 1 ENSMAMG00000002716 ENSMAMG00000025421 ENSMAMG00000027418 ENSMAMG00000028617 ENSMAMG00000002657 ENSMAMG00000002609 ENSMAMG00000002528 ENSMAMG00000002510 ENSMAMG00000002501 elf2a (ENSMAMG00000002486) ENSMAMG00000002474 ENSMAMG00000002448 ENSMAMG00000002435 naa15a (ENSMAMG00000002371) mlsl (ENSMAMG00000002318) hars (ENSMAMG00000002252) #22 ENSMAMG00000001857 #20 gfra3 (ENSMAMG00000001806) ENSMAMG00000001792 ENSMAMG00000026327 ENSMAMG00000001744 ENSMAMG00000001720 ENSMAMG00000001701 ENSMAMG00000001684 ENSMAMG00000026529 ENSMAMG00000001508 ENSMAMG00000001484 ENSMAMG00000001417 ENSMAMG00000001183 ENSMAMG00000001159 ENSMAMG00000001144 Eupercaria ANCESTRAL SPECIES 12 ENSGT00390000008738 ENSGT00390000009871 ENSGT00980000198976 ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000177743 ENSGT00990000203833 ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000159799 ENSGT00940000156526.b ENSGT00390000008828.fb.a Eupecaria_A ANCESTRAL SPECIES 13 ENSGT00390000002313 ENSGT00390000008738 ENSGT00390000009871 ENSGT00980000198976 ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00990000203833 ENSGT00940000170279 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000159799 ENSGT00940000156526.b ENSGT00390000008828.fb.a Ballan wrasse MODERN SPECIES 289 ENSLBEG00000023395 ENSLBEG00000023406 csnk1a1 (ENSLBEG00000023431) FBXO38 (ENSLBEG00000023533) magt1 (ENSLBEG00000023593) mlsl (ENSLBEG00000023648) igbp1 (ENSLBEG00000023700) abhd18 (ENSLBEG00000023739) rnf103 (ENSLBEG00000023798) ENSLBEG00000023826 naa15a (ENSLBEG00000023847) ENSLBEG00000023914 ENSLBEG00000023933 ENSLBEG00000023973 NOCT (ENSLBEG00000024022) hars (ENSLBEG00000024072) #22 dnd1 (ENSLBEG00000024151) #20 ENSLBEG00000024166 Eupecaria_B ANCESTRAL SPECIES 13 ENSGT00390000002313 ENSGT00390000008738 ENSGT00390000009871 ENSGT00980000198976 ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00990000203833 ENSGT00940000170279 ENSGT00440000037338 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000159799 ENSGT00940000156526.b ENSGT00390000008828.fb.a Perciformes ANCESTRAL SPECIES 13 ENSGT00940000158825.d ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000179542 ENSGT00940000156526.b ENSGT00390000008828.fb.a Cottioidei ANCESTRAL SPECIES 9 ENSGT00940000163421.a.d.b ENSGT00950000183196.D.b ENSGT00940000159795 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00950000183174.B.a.f ENSGT00440000037338 ENSGT00940000154953.a ENSGT00940000155249.h ENSGT00980000198976 ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000158825.d ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00390000002313 ENSGT00390000008738 ENSGT00390000009871 ENSGT00940000158457 ENSGT00520000055589.d.a.a ENSGT00940000153700 ENSGT00390000013163 ENSGT00390000012030.b.a ENSGT00390000002414 ENSGT00390000014635 ENSGT00390000006413 ENSGT00390000013284 ENSGT00940000161151 ENSGT00940000161248 ENSGT00920000149123.d Lumpfish MODERN SPECIES 1 tmem129 (ENSCLMG00005004264) ENSCLMG00005004279 rnf103 (ENSCLMG00005004292) abhd18 (ENSCLMG00005004327) igbp1 (ENSCLMG00005004393) magt1 (ENSCLMG00005004479) FBXO38 (ENSCLMG00005004780) ENSCLMG00005004814 csnk1a1 (ENSCLMG00005004821) ENSCLMG00005004827 STOX2 (ENSCLMG00005004830) enpp6 (ENSCLMG00005004835) ENSCLMG00005004857 FGF4 (ENSCLMG00005004861) mlsl (ENSCLMG00005004864) hars (ENSCLMG00005004880) #22 immt (ENSCLMG00005004903) slbp (ENSCLMG00005004912) ENSCLMG00005004917 ENSCLMG00005004918 ENSCLMG00005004929 pcdh18b (ENSCLMG00005006043) ENSCLMG00005006088 pcdh10b (ENSCLMG00005006089) ENSCLMG00005006091 NOCT (ENSCLMG00005006092) ENSCLMG00005006093 ENSCLMG00005006094 ENSCLMG00005006095 NAA15 (ENSCLMG00005006096) ENSCLMG00005006161 Stickleback MODERN SPECIES 3 naa15a (ENSGACG00000019625) ENSGACG00000019624 mgarpa (ENSGACG00000019623) ENSGACG00000019622 elf2a (ENSGACG00000019621) NOCT (ENSGACG00000019619) pcdh10b (ENSGACG00000019617) ENSGACG00000019615 ENSGACG00000019614 ENSGACG00000019612 pcdh18b (ENSGACG00000019611) ENSGACG00000019610 ENSGACG00000019609 FGF4 (ENSGACG00000019608) mlsl (ENSGACG00000019604) hars (ENSGACG00000019602) #22 immt (ENSGACG00000019599) slbp (ENSGACG00000019596) ENSGACG00000019594 ENSGACG00000019592 enpp6 (ENSGACG00000019588) STOX2 (ENSGACG00000019586) ENSGACG00000019585 csnk1a1 (ENSGACG00000019578) FBXO38 (ENSGACG00000019572) magt1 (ENSGACG00000019568) igbp1 (ENSGACG00000019563) abhd18 (ENSGACG00000019560) rnf103 (ENSGACG00000019558) tmem129 (ENSGACG00000019555) atoh8 (ENSGACG00000019554) Perciformes_a ANCESTRAL SPECIES 45 ENSGT00940000158457 ENSGT00390000009871 ENSGT00390000008738 ENSGT00390000002313 ENSGT00950000183174.B.a.f ENSGT00940000175899 ENSGT00990000203833 ENSGT00940000154953.a ENSGT00940000155249.h ENSGT00940000166427 ENSGT00940000156295.h ENSGT00940000158277.a ENSGT00980000198976 ENSGT00940000158825.d ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000179542 ENSGT00940000156526.b ENSGT00390000008828.fb.a Channel bull blenny MODERN SPECIES 1 enpp6 (ENSCGOG00000004546) ENSCGOG00000004583 slbp (ENSCGOG00000004588) immt (ENSCGOG00000004615) naa15a (ENSCGOG00000004659) ENSCGOG00000006340 ENSCGOG00000006345 ENSCGOG00000006346 NOCT (ENSCGOG00000006347) ENSCGOG00000006361 pcdh18b (ENSCGOG00000006959) pcdh10b (ENSCGOG00000006963) ENSCGOG00000006965 FGF4 (ENSCGOG00000006967) mlsl (ENSCGOG00000006968) hars (ENSCGOG00000007011) #22 dnd1 (ENSCGOG00000008667) #20 gfra3 (ENSCGOG00000008675) zgc:153146 (ENSCGOG00000008753) hvcn1 (ENSCGOG00000008757) ENSCGOG00000008759 ENSCGOG00000008761 nkx1.2lb (ENSCGOG00000008762) uvssa (ENSCGOG00000008767) ENSCGOG00000008782 ENSCGOG00000008793 Pike perch MODERN SPECIES 36 pcdh10b (ENSSLUG00000020659) ENSSLUG00000020662 mlsl (ENSSLUG00000020672) hars (ENSSLUG00000020740) #22 dnd1 (ENSSLUG00000021549) #20 gfra3 (ENSSLUG00000021554) zgc:153146 (ENSSLUG00000021564) hvcn1 (ENSSLUG00000021628) ENSSLUG00000021632 nkx1.2lb (ENSSLUG00000021635) uvssa (ENSSLUG00000021637) ENSSLUG00000021643 ENSSLUG00000021649 trappc11 (ENSSLUG00000021694) ENSSLUG00000021829 ENSSLUG00000021832 ENSSLUG00000021843 ENSSLUG00000021859 zgc:154054 (ENSSLUG00000021867) Eupecaria_C ANCESTRAL SPECIES 45 ENSGT00390000002313 ENSGT00390000008738 ENSGT00390000009871 ENSGT00940000158277.a ENSGT00980000198976 ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00940000177743 ENSGT00990000203833 ENSGT00440000037338 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000159799 ENSGT00940000156526.b ENSGT00390000008828.fb.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 51 ENSGT00940000161151 ENSGT00390000013284 ENSGT00940000158825.d ENSGT00390000002313 ENSGT00390000008738 ENSGT00390000009871 ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00390000002932 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00390000010980 ENSGT00940000159403 ENSGT00570000079101.a.b ENSGT00940000162861 ENSGT00940000164256 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00390000006550 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000159799 ENSGT00940000156526.b ENSGT00390000008828.fb.a Large yellow croaker MODERN SPECIES 490 PLCL1 (ENSLCRG00005004145) satb2 (ENSLCRG00005004151) dnajb11 (ENSLCRG00005004153) tbccd1 (ENSLCRG00005004168) crygs1 (ENSLCRG00005004171) lcmt2 (ENSLCRG00005004178) rab5b (ENSLCRG00005004186) dbr1 (ENSLCRG00005004190) armc8 (ENSLCRG00005004198) ENSLCRG00005004736 idh1 (ENSLCRG00005004740) ENSLCRG00005004835 ENSLCRG00005004840 naa15a (ENSLCRG00005004868) mlsl (ENSLCRG00005005688) hars (ENSLCRG00005005707) #22 ENSLCRG00005005761 #20 ENSLCRG00005005762 gfra3 (ENSLCRG00005005763) zgc:153146 (ENSLCRG00005005765) hvcn1 (ENSLCRG00005005767) ENSLCRG00005005769 ENSLCRG00005005774 nkx1.2lb (ENSLCRG00005005775) uvssa (ENSLCRG00005005780) lrrc40 (ENSLCRG00005005789) ENSLCRG00005005795 ENSLCRG00005005796 ccdc80 (ENSLCRG00005005798) slc35a5 (ENSLCRG00005005802) ##12 f5 (ENSLCRG00005006000) European seabass MODERN SPECIES 12 ENSDLAG00005033967 ENSDLAG00005028368 pcdh10b (ENSDLAG00005018962) ENSDLAG00005007239 ENSDLAG00005007218 ENSDLAG00005032285 ENSDLAG00005007156 PCDH18 (ENSDLAG00005007051) ENSDLAG00005006854 NOCT (ENSDLAG00005027566) elf2a (ENSDLAG00005006823) ENSDLAG00005034027 naa15a (ENSDLAG00005004697) mlsl (ENSDLAG00005004603) ENSDLAG00005004555 hars (ENSDLAG00005001950) #22 ENSDLAG00005034345 #20 gfra3 (ENSDLAG00005001827) ENSDLAG00005001812 ENSDLAG00005035145 ENSDLAG00005001798 ENSDLAG00005001784 ENSDLAG00005027187 ENSDLAG00005001779 ENSDLAG00005001751 ENSDLAG00005001381 ENSDLAG00005027944 ENSDLAG00005001308 ENSDLAG00005001300 ENSDLAG00005032052 ENSDLAG00005001284 Gilthead seabream MODERN SPECIES 9 ENSSAUG00010012169 ENSSAUG00010012171 ENSSAUG00010012174 ENSSAUG00010012176 pcdh18b (ENSSAUG00010012177) ENSSAUG00010012179 ENSSAUG00010012189 ENSSAUG00010012744 NOCT (ENSSAUG00010012749) ENSSAUG00010012750 ENSSAUG00010012751 ENSSAUG00010012753 NDUFC1 (ENSSAUG00010012757) naa15a (ENSSAUG00010008553) mlsl (ENSSAUG00010010381) hars (ENSSAUG00010010405) #22 ENSSAUG00010010435 #20 gfra3 (ENSSAUG00010010568) SLITRK2 (ENSSAUG00010010569) ENSSAUG00010010571 gfra3 (ENSSAUG00010010574) zgc:153146 (ENSSAUG00010010576) ENSSAUG00010010577 ENSSAUG00010010578 ENSSAUG00010010580 mgst1.1 (ENSSAUG00010010581) SLITRK2 (ENSSAUG00010010583) ENSSAUG00010010584 ENSSAUG00010010587 ENSSAUG00010010589 ENSSAUG00010010593 Tetraodontidae ANCESTRAL SPECIES 331 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 Fugu MODERN SPECIES 5 ENSTRUG00000005035 NOCT (ENSTRUG00000004981) ENSTRUG00000027570 ENSTRUG00000032965 ENSTRUG00000022561 ENSTRUG00000022218 naa15a (ENSTRUG00000003946) mlsl (ENSTRUG00000003359) ENSTRUG00000003143 hvcn1 (ENSTRUG00000002961) gfra3 (ENSTRUG00000002545) spdl1 (ENSTRUG00000009720) ENSTRUG00000009620 uvssa (ENSTRUG00000009400) nkx1.2lb (ENSTRUG00000009389) hars (ENSTRUG00000009144) #22 ENSTRUG00000009108 #20 trappc11 (ENSTRUG00000008668) setd7 (ENSTRUG00000008535) ENSTRUG00000008281 ENSTRUG00000029520 ENSTRUG00000019580 hspa9 (ENSTRUG00000007906) zgc:113425 (ENSTRUG00000031780) il1rapl2 (ENSTRUG00000007177) rab33ba (ENSTRUG00000007036) zgc:113425 (ENSTRUG00000028514) ENSTRUG00000006892 HDAC3 (ENSTRUG00000032750) rab33a (ENSTRUG00000020335) fmr1 (ENSTRUG00000005362) Tetraodon MODERN SPECIES 26 ik (ENSTNIG00000004392) #17 ENSTNIG00000004391 fbxo2 (ENSTNIG00000004388) ITGA5 (ENSTNIG00000004387) ENSTNIG00000004386 ENSTNIG00000004385 zbtb14 (ENSTNIG00000004384) ENSTNIG00000004383 FSCN1 (ENSTNIG00000004379) SMURF1 (ENSTNIG00000004378) ENSTNIG00000001590 ENSTNIG00000004373 ENSTNIG00000004372 dusp19b (ENSTNIG00000004370) dhx9 (ENSTNIG00000004369) hars (ENSTNIG00000004368) #22 dnd1 (ENSTNIG00000004367) #20 ENSTNIG00000004366 ENSTNIG00000004364 ENSTNIG00000004363 ENSTNIG00000001533 ENSTNIG00000004362 ENSTNIG00000004360 ENSTNIG00000000101 trmt112 (ENSTNIG00000004359) ano1a (ENSTNIG00000004358) ENSTNIG00000004350 ENSTNIG00000004348 ENSTNIG00000004347 CHD5 (ENSTNIG00000004346) ENSTNIG00000001202 Pinecone sodierfish MODERN SPECIES 1 ENSMMDG00005016359 ENSMMDG00005016362 elf2a (ENSMMDG00005001127) NOCT (ENSMMDG00005001131) ENSMMDG00005001142 pcdh18b (ENSMMDG00005001301) ENSMMDG00005001449 pcdh10b (ENSMMDG00005001459) enpp6 (ENSMMDG00005001474) STOX2 (ENSMMDG00005001543) ENSMMDG00005001552 trappc11 (ENSMMDG00005001630) ENSMMDG00005001817 ENSMMDG00005001819 ENSMMDG00005001824 hars (ENSMMDG00005001930) #22 dnd1 (ENSMMDG00005006554) #20 ENSMMDG00005006651 gfra3 (ENSMMDG00005006653) zgc:153146 (ENSMMDG00005006655) hvcn1 (ENSMMDG00005006658) ENSMMDG00005006660 nkx1.2lb (ENSMMDG00005006662) uvssa (ENSMMDG00005006663) spdl1 (ENSMMDG00005006667) ENSMMDG00005006668 ENSMMDG00005006670 csnk1a1 (ENSMMDG00005006673) FBXO38 (ENSMMDG00005006697) ENSMMDG00005006721 ENSMMDG00005006724 Cod MODERN SPECIES 1 pcdh10b (ENSGMOG00000013076) ENSGMOG00000030566 PCDH18 (ENSGMOG00000001212) ENSGMOG00000001677 NOCT (ENSGMOG00000030553) elf2a (ENSGMOG00000012271) ENSGMOG00000031323 naa15a (ENSGMOG00000012278) mlsl (ENSGMOG00000000690) rab33ba (ENSGMOG00000000885) ENSGMOG00000028531 ENSGMOG00000000732 ENSGMOG00000023219 ENSGMOG00000026328 ENSGMOG00000025405 hars (ENSGMOG00000016134) #22 ENSGMOG00000016112 #20 gfra3 (ENSGMOG00000026310) ENSGMOG00000033937 ENSGMOG00000019850 ENSGMOG00000008626 ENSGMOG00000008642 ENSGMOG00000008653 SLC49A3 (ENSGMOG00000008675) ENSGMOG00000012685 CPLX1 (ENSGMOG00000029235) ENSGMOG00000014336 ENSGMOG00000033973 ENSGMOG00000005169 ENSGMOG00000005058 exosc3 (ENSGMOG00000005045) Protacanthopterygii ANCESTRAL SPECIES 28 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00990000203833 ENSGT00390000002932 ENSGT00940000175899 ENSGT00950000183174.B.a.f ENSGT00940000157090.g ENSGT00390000008183 ENSGT00390000004827 ENSGT00940000160288 ENSGT00390000008828.fb.a ENSGT00940000156526.b ENSGT00510000050125.a.b ENSGT00510000050125.a.a ENSGT00940000159799 ENSGT00390000005922.b #22 ENSGT00940000159225 #20 ENSGT00940000165282.a ENSGT00940000157245 ENSGT00510000047493 ENSGT00510000049291 ENSGT00950000183168.C ENSGT00940000159334 ENSGT00940000153609.a ENSGT00940000154651.a ENSGT00940000158132.n ENSGT00940000165121.a.i ENSGT00950000183068.a.a.a.a ENSGT00950000183118.A.c.b.b ENSGT00940000176224 ENSGT00940000154651.b Northern pike MODERN SPECIES 3 ENSELUG00000026827 ENSELUG00000032214 ENSELUG00000002527 NOCT (ENSELUG00000002538) elf2a (ENSELUG00000002546) ENSELUG00000002550 ENSELUG00000002562 naa15a (ENSELUG00000002566) mlsl (ENSELUG00000000066) rab33ba (ENSELUG00000002575) zgc:113425 (ENSELUG00000002579) setd7 (ENSELUG00000002585) SCOC (ENSELUG00000029806) ENSELUG00000033357 ENSELUG00000024858 hars (ENSELUG00000002631) #22 DND1 (ENSELUG00000002636) #20 gfra3 (ENSELUG00000002643) rap2c (ENSELUG00000002651) zgc:92907 (ENSELUG00000028728) CXorf65 (ENSELUG00000002660) ENSELUG00000002672 FOXO4 (ENSELUG00000002676) snx12 (ENSELUG00000002689) SLC7A3 (ENSELUG00000002706) ubl3b (ENSELUG00000025601) ENSELUG00000002719 atl3 (ENSELUG00000002734) yif1a (ENSELUG00000002747) fosl1a (ENSELUG00000025427) ccdc85b (ENSELUG00000002756) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 12 ENSGT00940000166427.g ENSGT00940000155249.h.c ENSGT00940000154953.a.c ENSGT00990000203833 ENSGT00950000183174.B.a.f.c.a ENSGT00940000157090.g.e ENSGT00390000008183 ENSGT00390000004827 ENSGT00940000160288 ENSGT00390000008828.fb.a.c ENSGT00940000156526.b.b ENSGT00510000050125.a.a ENSGT00940000159799.q ENSGT00390000005922.b.k.a #22 ENSGT00940000159225 #20 ENSGT00940000165282.a.d ENSGT00940000157245.jb.a ENSGT00510000047493.t ENSGT00510000049291 ENSGT00950000183168.C.c ENSGT00940000159334.f ENSGT00940000153609.a.q.a ENSGT00940000154651.b.a ENSGT00390000004952.a.b.a ENSGT00390000000155.a.b.c ENSGT00940000158566.c ENSGT00940000166209.b ENSGT00390000009423.a.f ENSGT00940000160034.d Salmoninae_a ANCESTRAL SPECIES 18 ENSGT00940000158277.a.h ENSGT00940000156295.h.f ENSGT00940000166427.g ENSGT00940000155249.h.c ENSGT00940000154953.a.c ENSGT00990000203833 ENSGT00950000183174.B.a.f.c.a ENSGT00940000157090.g.e ENSGT00390000008183 ENSGT00390000004827 ENSGT00940000160288 ENSGT00390000008828.fb.a.c ENSGT00940000156526.b.b ENSGT00510000050125.a.a ENSGT00940000159799.q ENSGT00390000005922.b.k.a #22 ENSGT00940000159225 #20 ENSGT00940000165282.a.d ENSGT01100000263476.E.b.a.a.a.a.a.b.h.a.a.a.b ENSGT00940000157245.jb.a ENSGT00510000047493.t ENSGT00510000049291 ENSGT00950000183168.C.c ENSGT00940000159334.f ENSGT00940000153609.a.q.a ENSGT00940000154651.b.a ENSGT00390000004952.a.b.a ENSGT00390000000155.a.b.c ENSGT00940000158566.c ENSGT00940000166209.b ENSGT00390000009423.a.f Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00940000158277.a.h ENSGT00940000156295.h.f ENSGT00940000166427.g ENSGT00940000155249.h.c ENSGT00940000154953.a.c ENSGT00990000203833 ENSGT00950000183174.B.a.f.c.a ENSGT00940000157090.g.e ENSGT00390000008183 ENSGT00390000004827 ENSGT00940000160288 ENSGT00390000008828.fb.a.c ENSGT00940000156526.b.b ENSGT00510000050125.a.a ENSGT00940000159799.q ENSGT00390000005922.b.k.a #22 ENSGT00940000159225 #20 ENSGT00940000165282.a.d ENSGT01100000263476.E.b.a.a.a.a.a.b.h.a.a.a.b ENSGT00940000157245.jb.a ENSGT00510000047493.t ENSGT00510000049291 ENSGT00950000183168.C.c ENSGT00940000159334.f ENSGT00940000153609.a.q.a ENSGT00940000154651.b.a ENSGT00390000004952.a.b.a ENSGT00390000000155.a.b.c ENSGT00940000158566.c ENSGT00940000166209.b ENSGT00390000009423.a.f Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00940000158277.a.h ENSGT00940000156295.h.f ENSGT00940000166427.g ENSGT00940000155249.h.c ENSGT00940000154953.a.c ENSGT00990000203833 ENSGT00950000183174.B.a.f.c.a ENSGT00940000157090.g.e ENSGT00390000008183 ENSGT00390000004827 ENSGT00940000160288 ENSGT00390000008828.fb.a.c ENSGT00940000156526.b.b ENSGT00510000050125.a.a ENSGT00940000159799.q ENSGT00390000005922.b.k.a #22 ENSGT00940000159225 #20 ENSGT00940000165282.a.d ENSGT01100000263476.E.b.a.a.a.a.a.b.h.a.a.a.b ENSGT00940000157245.jb.a ENSGT00510000047493.t ENSGT00510000049291 ENSGT00950000183168.C.c ENSGT00940000159334.f ENSGT00940000153609.a.q.a ENSGT00940000154651.b.a ENSGT00390000004952.a.b.a ENSGT00390000000155.a.b.c ENSGT00940000158566.c ENSGT00940000166209.b ENSGT00390000009423.a.f Coho salmon MODERN SPECIES 10 pcdh18b (ENSOKIG00005021715) ENSOKIG00005021471 NOCT (ENSOKIG00005021438) ENSOKIG00005021434 elf2a (ENSOKIG00005021419) ENSOKIG00005021410 naa15a (ENSOKIG00005019713) rab33ba (ENSOKIG00005019645) zgc:113425 (ENSOKIG00005019638) setd7 (ENSOKIG00005019626) mgst2 (ENSOKIG00005019615) SCOC (ENSOKIG00005019542) ENSOKIG00005019439 ENSOKIG00005019423 ENSOKIG00005019417 hars (ENSOKIG00005019358) #22 dnd1 (ENSOKIG00005019337) #20 gfra3 (ENSOKIG00005019310) rap2c (ENSOKIG00005019286) zgc:92907 (ENSOKIG00005019268) CXorf65 (ENSOKIG00005019258) ENSOKIG00005019244 FOXO4 (ENSOKIG00005019237) SNX12 (ENSOKIG00005019219) SLC7A3 (ENSOKIG00005018957) ubl3b (ENSOKIG00005018874) ENSOKIG00005018862 atl3 (ENSOKIG00005017226) ENSOKIG00005017141 yif1a (ENSOKIG00005016910) fosl1a (ENSOKIG00005016890) Chinook salmon MODERN SPECIES 13 smim19 (ENSOTSG00005008869) pcdh10b (ENSOTSG00005008866) pcdh18b (ENSOTSG00005008862) ENSOTSG00005007943 NOCT (ENSOTSG00005007941) elf2a (ENSOTSG00005007940) ENSOTSG00005007939 naa15a (ENSOTSG00005007353) rab33ba (ENSOTSG00005007345) zgc:113425 (ENSOTSG00005007344) setd7 (ENSOTSG00005007342) mgst2 (ENSOTSG00005007341) SCOC (ENSOTSG00005007328) ENSOTSG00005007327 ENSOTSG00005007325 hars (ENSOTSG00005007095) #22 dnd1 (ENSOTSG00005007089) #20 ENSOTSG00005007087 ENSOTSG00005007085 gfra3 (ENSOTSG00005007083) ENSOTSG00005007080 ENSOTSG00005007078 zgc:92907 (ENSOTSG00005007072) CXorf65 (ENSOTSG00005007076) ENSOTSG00005007065 FOXO4 (ENSOTSG00005007062) SNX12 (ENSOTSG00005007058) SLC7A3 (ENSOTSG00005006938) ubl3b (ENSOTSG00005006933) ENSOTSG00005006932 atl3 (ENSOTSG00005006880) Rainbow trout MODERN SPECIES 5 ENSOMYG00000047463 ENSOMYG00000047875 NOCT (ENSOMYG00000062174) elf2a (ENSOMYG00000032897) ENSOMYG00000032888 naa15a (ENSOMYG00000032601) rab33ba (ENSOMYG00000060707) zgc:113425 (ENSOMYG00000032497) setd7 (ENSOMYG00000032491) ENSOMYG00000052455 mgst2 (ENSOMYG00000032488) ENSOMYG00000058427 ENSOMYG00000032447 ENSOMYG00000032436 ENSOMYG00000067646 hars (ENSOMYG00000032409) #22 dnd1 (ENSOMYG00000032397) #20 ENSOMYG00000074313 gfra3 (ENSOMYG00000032384) ENSOMYG00000032362 ENSOMYG00000063319 ENSOMYG00000032350 zgc:92907 (ENSOMYG00000032333) ENSOMYG00000032343 ENSOMYG00000032301 FOXO4 (ENSOMYG00000032284) SNX12 (ENSOMYG00000032102) SLC7A3 (ENSOMYG00000026994) ubl3b (ENSOMYG00000047013) ENSOMYG00000026842 atl3 (ENSOMYG00000026158) Salmo ANCESTRAL SPECIES 24 ENSGT00390000000436.h ENSGT00940000158277.a.h ENSGT00940000156295.h.f ENSGT00940000166427.g ENSGT00940000155249.h.c ENSGT00940000154953.a.c ENSGT00950000183174.B.a.f.c.a ENSGT00940000157090.g.e ENSGT00390000008183 ENSGT00390000004827 ENSGT00940000160288 ENSGT00390000008828.fb.a.c ENSGT00940000156526.b.b ENSGT00510000050125.a.a ENSGT00940000159799.q ENSGT00390000005922.b.k.a #22 ENSGT00940000159225 #20 ENSGT00940000165282.a.d ENSGT01100000263476.E.b.a.a.a.a.a.b.h.a.a.a.b ENSGT00940000157245.jb.a ENSGT00510000047493.t ENSGT00510000049291 ENSGT00950000183168.C.c ENSGT00940000159334.f ENSGT00940000153609.a.q.a ENSGT00940000154651.b.a ENSGT00390000004952.a.b.a ENSGT00390000000155.a.b.c ENSGT00940000158566.c ENSGT00940000166209.b ENSGT00390000009423.a.f Atlantic salmon MODERN SPECIES 24 ENSSSAG00000060032 ENSSSAG00000060103 ENSSSAG00000060137 pcdh10b (ENSSSAG00000076866) PCDH18 (ENSSSAG00000003075) ENSSSAG00000076901 NOCT (ENSSSAG00000064865) elf2a (ENSSSAG00000064871) naa15a (ENSSSAG00000064932) rab33b (ENSSSAG00000065195) setd7 (ENSSSAG00000037147) mgst2 (ENSSSAG00000037693) SCOC (ENSSSAG00000106232) ENSSSAG00000104669 ENSSSAG00000039375 hars (ENSSSAG00000039435) #22 ENSSSAG00000040100 #20 gfra3 (ENSSSAG00000040116) ENSSSAG00000121147 ENSSSAG00000089058 rap2c (ENSSSAG00000105600) zgc:92907 (ENSSSAG00000040260) CXorf65 (ENSSSAG00000105934) ENSSSAG00000077625 FOXO4 (ENSSSAG00000077664) SNX12 (ENSSSAG00000106464) SLC7A3 (ENSSSAG00000093201) ubl3b (ENSSSAG00000105083) ENSSSAG00000109460 atl3 (ENSSSAG00000041501) fosl1a (ENSSSAG00000054076) River trout MODERN SPECIES 22 smim19 (ENSSTUG00000022287) pcdh10b (ENSSTUG00000022302) pcdh18b (ENSSTUG00000022322) ENSSTUG00000022351 NOCT (ENSSTUG00000022536) elf2a (ENSSTUG00000022539) naa15a (ENSSTUG00000022684) rab33ba (ENSSTUG00000026649) zgc:113425 (ENSSTUG00000026654) setd7 (ENSSTUG00000026665) mgst2 (ENSSTUG00000026679) SCOC (ENSSTUG00000026690) ENSSTUG00000016338 ENSSTUG00000016349 ENSSTUG00000016363 hars (ENSSTUG00000016405) #22 dnd1 (ENSSTUG00000016450) #20 gfra3 (ENSSTUG00000016458) ENSSTUG00000016469 ENSSTUG00000016480 rap2c (ENSSTUG00000016490) zgc:92907 (ENSSTUG00000016504) ENSSTUG00000016516 FOXO4 (ENSSTUG00000016522) SNX12 (ENSSTUG00000016526) SLC7A3 (ENSSTUG00000016547) ubl3b (ENSSTUG00000016684) ENSSTUG00000016711 atl3 (ENSSTUG00000016731) ENSSTUG00000016971 yif1a (ENSSTUG00000016979) Huchen MODERN SPECIES 69 ENSHHUG00000028459 NOCT (ENSHHUG00000028580) ENSHHUG00000028583 naa15a (ENSHHUG00000028591) ENSHHUG00000028979 rab33ba (ENSHHUG00000028982) zgc:113425 (ENSHHUG00000028984) setd7 (ENSHHUG00000028988) mgst2 (ENSHHUG00000028998) SCOC (ENSHHUG00000029007) ENSHHUG00000029014 ENSHHUG00000029103 ENSHHUG00000029105 hars (ENSHHUG00000029119) #22 dnd1 (ENSHHUG00000029136) #20 ENSHHUG00000029145 gfra3 (ENSHHUG00000029148) ENSHHUG00000029163 ENSHHUG00000029166 ENSHHUG00000029177 rap2c (ENSHHUG00000029181) zgc:92907 (ENSHHUG00000029215) CXorf65 (ENSHHUG00000029224) ENSHHUG00000029243 FOXO4 (ENSHHUG00000029252) SNX12 (ENSHHUG00000029254) SLC7A3 (ENSHHUG00000029290) ubl3b (ENSHHUG00000029334) ENSHHUG00000029361 Salmoninae ANCESTRAL SPECIES 40 ENSGT00980000198976 ENSGT00940000158277.a.g ENSGT00940000156295.h.e ENSGT00940000166427.h ENSGT00940000155249.h.d ENSGT00940000154953.a.d ENSGT00940000175899 ENSGT00950000183174.B.a.f.c.b ENSGT00390000002932 ENSGT00940000157090.g.f ENSGT00390000008828.fb.a.d ENSGT00940000156526.b.a ENSGT00510000050125.a.b ENSGT00940000159799.r ENSGT00390000005922.b.k.b #22 ENSGT01030000238271 ENSGT00940000165282.a.c ENSGT00940000157245.jb.b ENSGT00510000047493.s ENSGT00950000183168.C.d ENSGT00940000159334.e ENSGT00940000153609.a.q.b ENSGT00940000154651.b.b ENSGT00390000004952.a.b.b ENSGT00390000000155.a.b.d ENSGT00950000183000.c.a.a.g ENSGT00940000158566.d ENSGT00940000166209.a ENSGT00390000009423.a.e ENSGT00940000160034.c Huchen MODERN SPECIES 819 elf2a (ENSHHUG00000051111) ENSHHUG00000051123 naa15a (ENSHHUG00000051128) mlsl (ENSHHUG00000051344) rab33ba (ENSHHUG00000051354) ENSHHUG00000051358 SCOC (ENSHHUG00000051360) zgc:154054 (ENSHHUG00000051362) ENSHHUG00000051365 ENSHHUG00000030207 hars (ENSHHUG00000030212) #22 ENSHHUG00000030295 gfra3 (ENSHHUG00000030302) rap2c (ENSHHUG00000030306) zgc:92907 (ENSHHUG00000030323) ENSHHUG00000030333 FOXO4 (ENSHHUG00000030342) SNX12 (ENSHHUG00000030343) SLC7A3 (ENSHHUG00000030369) ubl3b (ENSHHUG00000030387) ENSHHUG00000030393 cfl1 (ENSHHUG00000030398) atl3 (ENSHHUG00000030455) ENSHHUG00000030481 yif1a (ENSHHUG00000030484) fosl1a (ENSHHUG00000030494) Salmoninae_a ANCESTRAL SPECIES 40 ENSGT00390000000436.g ENSGT00940000158277.a.g ENSGT00980000198976 ENSGT00940000156295.h.e ENSGT00940000166427.h ENSGT00940000155249.h.d ENSGT00940000154953.a.d ENSGT00940000175899 ENSGT00950000183174.B.a.f.c.b ENSGT00390000002932 ENSGT00940000157090.g.f ENSGT00390000008828.fb.a.d ENSGT00940000156526.b.a ENSGT00510000050125.a.b ENSGT00940000159799.r ENSGT00390000005922.b.k.b #22 ENSGT00940000165282.a.c ENSGT00940000157245.jb.b ENSGT00510000047493.s ENSGT00950000183168.C.d ENSGT00940000159334.e ENSGT00940000153609.a.q.b ENSGT00940000154651.b.b ENSGT00390000004952.a.b.b ENSGT00390000000155.a.b.d ENSGT00950000183000.c.a.a.g ENSGT00940000158566.d ENSGT00940000166209.a ENSGT00390000009423.a.e ENSGT00940000160034.c ENSGT00940000162317.d.b Salmo ANCESTRAL SPECIES 43 ENSGT00390000000436.g ENSGT00940000158277.a.g ENSGT00980000198976 ENSGT00940000156295.h.e ENSGT00940000166427.h ENSGT00940000155249.h.d ENSGT00940000154953.a.d ENSGT00940000175899 ENSGT00950000183174.B.a.f.c.b ENSGT00390000002932 ENSGT00940000157090.g.f ENSGT00390000008828.fb.a.d ENSGT00940000156526.b.a ENSGT00510000050125.a.b ENSGT00940000159799.r ENSGT00390000005922.b.k.b #22 ENSGT00940000165282.a.c ENSGT00940000157245.jb.b ENSGT00510000047493.s ENSGT00950000183168.C.d ENSGT00940000159334.e ENSGT00940000153609.a.q.b ENSGT00940000154651.b.b ENSGT00390000004952.a.b.b ENSGT00390000000155.a.b.d ENSGT00950000183000.c.a.a.g ENSGT00940000158566.d ENSGT00940000166209.a ENSGT00390000009423.a.e ENSGT00940000160034.c ENSGT00940000162317.d.b Atlantic salmon MODERN SPECIES 28 ENSSSAG00000076856 ENSSSAG00000101533 ENSSSAG00000076876 ENSSSAG00000113148 ENSSSAG00000060507 elf2a (ENSSSAG00000077439) naa15a (ENSSSAG00000077455) mlsl (ENSSSAG00000077509) rab33ba (ENSSSAG00000092646) ENSSSAG00000038213 ENSSSAG00000091338 ENSSSAG00000109541 ENSSSAG00000073604 ENSSSAG00000077548 ENSSSAG00000077551 ENSSSAG00000077557 #22 ENSSSAG00000108669 ENSSSAG00000098561 zgc:92907 (ENSSSAG00000077613) ENSSSAG00000095000 ENSSSAG00000040362 FOXO4 (ENSSSAG00000088589) ENSSSAG00000116128 SLC7A3 (ENSSSAG00000088593) ubl3b (ENSSSAG00000040301) ENSSSAG00000119175 COF2 (ENSSSAG00000040393) atl3 (ENSSSAG00000040621) ENSSSAG00000045255 yif1a (ENSSSAG00000045269) fosl1a (ENSSSAG00000098629) River trout MODERN SPECIES 4 ENSSTUG00000033332 pcdh10b (ENSSTUG00000033335) ENSSTUG00000033351 pcdh18b (ENSSTUG00000033359) ENSSTUG00000033371 NOCT (ENSSTUG00000033837) elf2a (ENSSTUG00000033850) ENSSTUG00000033899 naa15a (ENSSTUG00000033994) mlsl (ENSSTUG00000036309) rab33ba (ENSSTUG00000036352) SCOC (ENSSTUG00000036376) zgc:154054 (ENSSTUG00000036412) ENSSTUG00000036444 ENSSTUG00000036449 hars (ENSSTUG00000036490) #22 gfra3 (ENSSTUG00000038418) rap2c (ENSSTUG00000038429) zgc:92907 (ENSSTUG00000038438) ENSSTUG00000038456 FOXO4 (ENSSTUG00000038473) SNX12 (ENSSTUG00000038483) SLC7A3 (ENSSTUG00000038502) ubl3b (ENSSTUG00000038516) ENSSTUG00000038530 cfl1 (ENSSTUG00000038534) atl3 (ENSSTUG00000038573) ENSSTUG00000038873 yif1a (ENSSTUG00000038880) fosl1a (ENSSTUG00000038932) ccdc85b (ENSSTUG00000038938) Oncorhynchus ANCESTRAL SPECIES 39 ENSGT00390000000436.g ENSGT00980000198976 ENSGT00940000158277.a.g ENSGT00940000156295.h.e ENSGT00940000166427.h ENSGT00940000155249.h.d ENSGT00940000154953.a.d ENSGT00940000175899 ENSGT00950000183174.B.a.f.c.b ENSGT00390000002932 ENSGT00940000157090.g.f ENSGT00390000008828.fb.a.d ENSGT00940000156526.b.a ENSGT00510000050125.a.b ENSGT00940000159799.r ENSGT00390000005922.b.k.b #22 ENSGT00940000165282.a.c ENSGT00940000157245.jb.b ENSGT00510000047493.s ENSGT00950000183168.C.d ENSGT00940000159334.e ENSGT00940000153609.a.q.b ENSGT00940000154651.b.b ENSGT00390000004952.a.b.b ENSGT00390000000155.a.b.d ENSGT00950000183000.c.a.a.g ENSGT00940000158566.d ENSGT00940000166209.a ENSGT00390000009423.a.e ENSGT00940000160034.c ENSGT00940000162317.d.b Oncorhynchus_a ANCESTRAL SPECIES 40 ENSGT00390000000436.g ENSGT00980000198976 ENSGT00940000158277.a.g ENSGT00940000156295.h.e ENSGT00940000166427.h ENSGT00940000155249.h.d ENSGT00940000154953.a.d ENSGT00940000175899 ENSGT00950000183174.B.a.f.c.b ENSGT00390000002932 ENSGT00940000157090.g.f ENSGT00390000008828.fb.a.d ENSGT00940000156526.b.a ENSGT00510000050125.a.b ENSGT00940000159799.r ENSGT00390000005922.b.k.b #22 ENSGT00940000165282.a.c ENSGT00940000157245.jb.b ENSGT00510000047493.s ENSGT00950000183168.C.d ENSGT00940000159334.e ENSGT00940000153609.a.q.b ENSGT00940000154651.b.b ENSGT00390000004952.a.b.b ENSGT00390000000155.a.b.d ENSGT00950000183000.c.a.a.g ENSGT00940000158566.d ENSGT00940000166209.a ENSGT00390000009423.a.e ENSGT00940000160034.c ENSGT00940000162317.d.b Chinook salmon MODERN SPECIES 32 ENSOTSG00005021507 pcdh18b (ENSOTSG00005021506) ENSOTSG00005017637 ENSOTSG00005017623 ENSOTSG00005017621 NOCT (ENSOTSG00005017620) elf2a (ENSOTSG00005017618) ENSOTSG00005017615 naa15a (ENSOTSG00005017479) mlsl (ENSOTSG00005017429) rab33ba (ENSOTSG00005017424) SCOC (ENSOTSG00005017423) zgc:154054 (ENSOTSG00005017421) ENSOTSG00005017420 ENSOTSG00005017419 hars (ENSOTSG00005017125) #22 gfra3 (ENSOTSG00005017124) rap2c (ENSOTSG00005017123) zgc:92907 (ENSOTSG00005017121) ENSOTSG00005017119 FOXO4 (ENSOTSG00005017118) SNX12 (ENSOTSG00005017108) SLC7A3 (ENSOTSG00005017096) ubl3b (ENSOTSG00005017092) ENSOTSG00005017088 atl3 (ENSOTSG00005014917) ENSOTSG00005014902 yif1a (ENSOTSG00005014901) fosl1a (ENSOTSG00005014899) ccdc85b (ENSOTSG00005014898) fibpa (ENSOTSG00005014897) Coho salmon MODERN SPECIES 6 SMIM19 (ENSOKIG00005008515) ENSOKIG00005008488 pcdh10b (ENSOKIG00005008468) PCDH18 (ENSOKIG00005008458) ENSOKIG00005007260 ENSOKIG00005007191 elf2a (ENSOKIG00005007122) ENSOKIG00005007100 naa15a (ENSOKIG00005006903) mlsl (ENSOKIG00005006723) rab33ba (ENSOKIG00005006704) SCOC (ENSOKIG00005006681) ENSOKIG00005006676 ENSOKIG00005006664 ENSOKIG00005006651 ENSOKIG00005004593 #22 ENSOKIG00005004289 rap2c (ENSOKIG00005004262) zgc:92907 (ENSOKIG00005031117) ENSOKIG00005031100 FOXO4 (ENSOKIG00005031081) SNX12 (ENSOKIG00005031024) SLC7A3 (ENSOKIG00005030938) ubl3b (ENSOKIG00005030916) ENSOKIG00005030902 cfl1 (ENSOKIG00005030843) atl3 (ENSOKIG00005026952) ENSOKIG00005026813 yif1a (ENSOKIG00005026753) fosl1a (ENSOKIG00005026742) ccdc85b (ENSOKIG00005026734) Rainbow trout MODERN SPECIES 23 ENSOMYG00000075518 ENSOMYG00000047521 pcdh10b (ENSOMYG00000047517) ENSOMYG00000070638 ENSOMYG00000076855 ENSOMYG00000047509 ENSOMYG00000033017 elf2a (ENSOMYG00000047370) ENSOMYG00000047363 ENSOMYG00000047142 rab33ba (ENSOMYG00000047359) ENSOMYG00000053590 ENSOMYG00000047316 ENSOMYG00000047261 ENSOMYG00000047256 ENSOMYG00000070405 #22 ENSOMYG00000047055 ENSOMYG00000067307 rap2c (ENSOMYG00000051416) zgc:92907 (ENSOMYG00000047044) ENSOMYG00000047036 FOXO4 (ENSOMYG00000047031) ENSOMYG00000047027 SLC7A3 (ENSOMYG00000047021) ubl3b (ENSOMYG00000057816) ENSOMYG00000063281 ENSOMYG00000066132 ENSOMYG00000047010 atl3 (ENSOMYG00000046506) ENSOMYG00000046285 yif1a (ENSOMYG00000046260) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00390000005922.b.l.a.a #22 Huchen MODERN SPECIES 12299 ENSHHUG00000015073 #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00390000005922.b.l.a.a #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00390000005922.b.l.a.a #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00390000005922.b.l.a.a #22 Chinook salmon MODERN SPECIES 2310 ENSOTSG00005021155 #22 Salmoninae ANCESTRAL SPECIES ENSGT00390000005922.b.l.a.b #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00390000005922.b.l.a.b #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00390000005922.b.l.a.b #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00390000005922.b.l.a.b #22 Chinook salmon MODERN SPECIES 2822 ENSOTSG00005021052 #22 Salmoninae ANCESTRAL SPECIES ENSGT00390000005922.b.l.b #22 Huchen MODERN SPECIES 11820 ENSHHUG00000019436 #22 Elephant shark MODERN SPECIES 1577 mrpl22 (ENSCMIG00000016948) ENSCMIG00000016953 #11 ENSCMIG00000016957 SLC35A4 (ENSCMIG00000016960) #12 ENSCMIG00000016961 ENSCMIG00000016966 #16 ndufa2 (ENSCMIG00000016969) #18 ik (ENSCMIG00000016983) #17 ENSCMIG00000017031 ENSCMIG00000017045 hars1 (ENSCMIG00000017074) #22 ENSCMIG00000017178 #20 zmat2 (ENSCMIG00000017180) #23 ENSCMIG00000017186 ENSCMIG00000017187 ENSCMIG00000017190 ENSCMIG00000017205 ENSCMIG00000017207 ENSCMIG00000017218 ENSCMIG00000017234 ENSCMIG00000017237 ENSCMIG00000017240 ENSCMIG00000017254 ENSCMIG00000017260 ENSCMIG00000017262 ENSCMIG00000017270 Cyclostomata ANCESTRAL SPECIES ENSGT00390000005922.b #22 Hagfish DUPLICATION Hagfish MODERN SPECIES 808 ENSEBUG00000006374 ENSEBUG00000005261 ENSEBUG00000000752 ENSEBUG00000006563 hars (ENSEBUG00000003081) #22 psmb6 (ENSEBUG00000013943) ENSEBUG00000016056 ENSEBUG00000007562 ENSEBUG00000008259 ENSEBUG00000009272 ENSEBUG00000000583 ENSEBUG00000015204 ENSEBUG00000008482 ENSEBUG00000014208 ENSEBUG00000014338 ENSEBUG00000012867 ENSEBUG00000014599 ENSEBUG00000008234 ENSEBUG00000005539 ENSEBUG00000007389 Hagfish MODERN SPECIES 1028 ENSEBUG00000011093 ENSEBUG00000014294 ENSEBUG00000003258 ENSEBUG00000012246 ENSEBUG00000008722 taf1 (ENSEBUG00000010598) ENSEBUG00000013836 ilk (ENSEBUG00000000707) rbpjb (ENSEBUG00000005950) ENSEBUG00000008296 ENSEBUG00000000839 chic1 (ENSEBUG00000011193) ENSEBUG00000006511 ENSEBUG00000003209 RAB9B (ENSEBUG00000004967) ENSEBUG00000003733 #22 ENSEBUG00000008606 ENSEBUG00000011396 ENSEBUG00000016813 ENSEBUG00000014082 ENSEBUG00000000550 txndc9 (ENSEBUG00000008110) ids (ENSEBUG00000001475) ENSEBUG00000010197 ENSEBUG00000002867 ENSEBUG00000009836 ENSEBUG00000009936 ENSEBUG00000005052 Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00390000005922.a.a ##22 Gnathostomata ANCESTRAL SPECIES ENSGT00390000005922.a.a ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00390000005922.a.a ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00390000005922.a.a ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00390000005922.a.a ##22 Amniota ANCESTRAL SPECIES ENSGT00390000005922.a.a ##22 Sauria ANCESTRAL SPECIES ENSGT00390000005922.a.a ##22 Archelosauria ANCESTRAL SPECIES ENSGT00390000005922.a.a ##22 Archosauria ANCESTRAL SPECIES ENSGT00390000005922.a.a ##22 Aves ANCESTRAL SPECIES 15 ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000156683.l.c.a ENSGT00940000159725 ENSGT00940000156683.l.c.b ENSGT00940000161193.e.b #29 ENSGT01090000260555 ENSGT00940000161193.e.a #29 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT01030000235101 ENSGT00940000163564 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a Neognathae ANCESTRAL SPECIES 14 ENSGT00940000159725.e.b.a.b.a.a ENSGT00940000156683.l.d.b ENSGT00940000159725.e.a ENSGT00940000161193.e.b #29 ENSGT01090000260555 ENSGT00940000161193.e.a.a #29 ENSGT00940000165142 ENSGT00940000161193.e.a.b #29 ENSGT00940000160554 #25 ENSGT00940000163564.a ENSGT01030000235101 ENSGT00940000163564.b.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a Galloanserae ANCESTRAL SPECIES 14 ENSGT00940000159725.f ENSGT00940000156683.l.d.b ENSGT00940000161193.e.b #29 ENSGT00940000156683.l.d.a.b ENSGT00940000156683.l.d.a.a ENSGT01040000241462 ENSGT00940000165142 ENSGT00940000161193.e.a.b #29 ENSGT00940000160554 #25 ENSGT00980000198828.a ENSGT01030000235101 ENSGT00940000163564.b.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674 Phasianidae ANCESTRAL SPECIES 14 ENSGT00940000158869 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00940000160487 ENSGT00940000162232 ENSGT00940000156683.l.c.a ENSGT00940000159725.f ENSGT00940000156683.l.d.b ENSGT00940000156683.l.d.a.b ENSGT00940000160554 #25 ENSGT01030000235101 ENSGT00940000163564.b.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674.f ENSGT00940000158778 ENSGT00950000183162.a.a Japanese quail MODERN SPECIES 4 ENSCJPG00005011426 ENSCJPG00005011427 ENSCJPG00005011428 PCDHGC3 (ENSCJPG00005011431) ENSCJPG00005011436 ENSCJPG00005011437 ENSCJPG00005011438 ENSCJPG00005011485 #30 ENSCJPG00005011486 PCDHAC2 (ENSCJPG00005011498) #25 ENSCJPG00005011499 ENSCJPG00005011505 ENSCJPG00005011506 ZMAT2 (ENSCJPG00005011507) #23 ENSCJPG00005011518 ##22 ENSCJPG00005012106 ##22 DND1 (ENSCJPG00005012253) #20 WDR55 (ENSCJPG00005012254) #19 IK (ENSCJPG00005012255) #17 NDUFA2 (ENSCJPG00005012256) #18 TMCO6 (ENSCJPG00005012257) #16 ENSCJPG00005012258 #14 SLC35A4 (ENSCJPG00005012259) #12 ENSCJPG00005012260 STING1 (ENSCJPG00005012261) UBE2D2 (ENSCJPG00005012262) CXXC5 (ENSCJPG00005012265) PSD2 (ENSCJPG00005012267) NRG2 (ENSCJPG00005012340) PURA (ENSCJPG00005012342) ENSCJPG00005012344 Phasianidae_b ANCESTRAL SPECIES 43 ENSGT00940000161193.e.a.b #29 ENSGT00940000163564.b.a ENSGT01030000235101 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674.f ENSGT00940000158778 ENSGT00950000183162.a.a Chicken MODERN SPECIES 4 ENSGALG00010011036 #29 ENSGALG00010011023 ENSGALG00010011011 ENSGALG00010011005 ENSGALG00010010999 ENSGALG00010012460 PCDHA6 (ENSGALG00010010992) ENSGALG00010012443 ENSGALG00010010969 ENSGALG00010012433 ENSGALG00010012422 ENSGALG00010012418 ENSGALG00010010966 ZMAT2 (ENSGALG00010010957) #23 ENSGALG00010010934 ##22 HARS1 (ENSGALG00010012992) ##22 DND1 (ENSGALG00010010926) #20 WDR55 (ENSGALG00010011726) #19 IK (ENSGALG00010011708) #17 NDUFA2 (ENSGALG00010011685) #18 TMCO6 (ENSGALG00010011670) #16 CD14 (ENSGALG00010011659) #14 ENSGALG00010008095 SLC35A4 (ENSGALG00010008088) #12 TMEM173 (ENSGALG00010011969) UBE2D2 (ENSGALG00010011952) CXXC5 (ENSGALG00010011913) PSD2 (ENSGALG00010011875) NRG2 (ENSGALG00010011853) PURA (ENSGALG00010012412) CYSTM1 (ENSGALG00010008850) Turkey MODERN SPECIES 6 ENSMGAG00000018875 ENSMGAG00000000985 ENSMGAG00000015432 #12 ENSMGAG00000020194 ENSMGAG00000017042 #14 ENSMGAG00000022931 #18 ENSMGAG00000000969 #16 ENSMGAG00000000901 #17 ENSMGAG00000000896 #20 ENSMGAG00000020466 #19 ENSMGAG00000000847 ##22 ENSMGAG00000000843 #23 ENSMGAG00000000769 ENSMGAG00000017512 ENSMGAG00000021392 ENSMGAG00000016406 #25 ENSMGAG00000020258 ENSMGAG00000022684 ENSMGAG00000020390 ENSMGAG00000019277 ENSMGAG00000010211 ENSMGAG00000018817 ENSMGAG00000021336 ENSMGAG00000019695 ##9 SLC4A9 (ENSMGAG00000001068) #7 ENSMGAG00000001060 Anatidae ANCESTRAL SPECIES 15 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674.c ENSGT00940000158778 ENSGT00950000183162.a.a Duck MODERN SPECIES 313 ENSAPLG00000014100 ZMAT2 (ENSAPLG00000016678) #23 ENSAPLG00000013069 ##22 DND1 (ENSAPLG00000013518) #20 WDR55 (ENSAPLG00000013532) #19 ENSAPLG00000020748 #17 ENSAPLG00000014377 #14 SLC35A4 (ENSAPLG00000014626) #12 UBE2D2 (ENSAPLG00000014740) CXXC5 (ENSAPLG00000021528) Neognathae_b ANCESTRAL SPECIES 16 ENSGT00940000159725.e.a.b ENSGT00940000161193.e.b #29 ENSGT01090000260555 ENSGT00940000161193.e.a.a #29 ENSGT00940000165142 ENSGT00940000161193.e.a.b #29 ENSGT00940000160554 #25 ENSGT00980000199037 ENSGT01030000235101.d ENSGT00940000163564.b.a ENSGT01030000235101.c.a ENSGT00940000163564.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674 ENSGT00940000158778 ENSGT00950000183162.a.a Neognathae_c ANCESTRAL SPECIES 19 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00940000160487 ENSGT00940000162232 ENSGT00940000156683.l.c.b.a.a ENSGT00940000159725.e.b.b ENSGT00940000161193.e.b #29 ENSGT00940000161193.e.a.b #29 ENSGT00940000160554 #25 ENSGT00980000198828.a ENSGT01030000235101.d ENSGT00940000163564.b.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674 ENSGT00940000158778 ENSGT00950000183162.a.a ENSGT00940000165340 Kakapo MODERN SPECIES 6 ENSSHBG00005012195 #29 ENSSHBG00005012184 ENSSHBG00005012168 ENSSHBG00005012153 ENSSHBG00005012134 ENSSHBG00005012121 ENSSHBG00005012107 ENSSHBG00005012095 ENSSHBG00005012083 ENSSHBG00005012069 ENSSHBG00005012058 PCDHAC2 (ENSSHBG00005012025) #25 ENSSHBG00005011984 ZMAT2 (ENSSHBG00005011970) #23 ENSSHBG00005011618 ##22 ENSSHBG00005011498 ##22 DND1 (ENSSHBG00005011474) #20 WDR55 (ENSSHBG00005011454) #19 IK (ENSSHBG00005011411) #17 NDUFA2 (ENSSHBG00005011398) #18 TMCO6 (ENSSHBG00005011351) #16 ENSSHBG00005011387 ENSSHBG00005011314 #14 SLC35A4 (ENSSHBG00005011293) #12 STING1 (ENSSHBG00005011270) UBE2D2 (ENSSHBG00005011252) CXXC5 (ENSSHBG00005011229) PSD2 (ENSSHBG00005010803) NRG2 (ENSSHBG00005010699) PURA (ENSSHBG00005010650) ENSSHBG00005000731 Passeriformes ANCESTRAL SPECIES 14 ENSGT00940000159725.e.b.a.b.a.b ENSGT00940000156683.l.c.b.a.b ENSGT00940000159725.e.b.a.b.a.a ENSGT00940000156683.l.d.b ENSGT00940000156683.l.d.a.b ENSGT00940000159725.e.b.b ENSGT00940000161193.e.b #29 ENSGT01090000260555 ENSGT00940000161193.e.a.a #29 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000163564.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000165340 ENSGT00950000183162.a.a ENSGT00940000158778 ENSGT00940000159674 ENSGT00940000154108.a ENSGT00940000153169.A.b.a ENSGT00390000008582 ENSGT00390000007844 ENSGT00950000182827.F #12 Passeriformes_d ANCESTRAL SPECIES 15 ENSGT00940000156683.l.c.a.a.b ENSGT00940000159725.e.b.a.b.a.a ENSGT00940000156683.l.d.b ENSGT00940000156683.l.d.a.b ENSGT00940000159725.e.b.b ENSGT00940000161193.e.b #29 ENSGT01090000260555 ENSGT00940000161193.e.a.a #29 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000163564.a ENSGT00940000163777.b.f ENSGT00390000010712.q #23 ENSGT00390000010712.r #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000165340 ENSGT00950000183162.a.a ENSGT00940000158778 ENSGT00940000159674 ENSGT00940000154108.a ENSGT00940000153169.A.b.a ENSGT00390000008582 ENSGT00390000007844 ENSGT00950000182827.F #12 Passeriformes_g ANCESTRAL SPECIES 15 ENSGT00390000002137 ENSGT00940000155521 ENSGT00940000164810 ENSGT00940000158869 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00940000160487 ENSGT00980000199037 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000163564.a ENSGT00940000163777.b.f ENSGT00390000010712.q #23 ENSGT00390000010712.r #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000165340 ENSGT00950000183162.a.a ENSGT00940000158778 ENSGT00940000159674 ENSGT00940000154108.a ENSGT00940000153169.A.b.a ENSGT00390000008582 ENSGT00390000007844 ENSGT00950000182827.F #12 Medium ground finch MODERN SPECIES 475 ENSGFOG00000003970 ZMAT2 (ENSGFOG00000003988) #23 ENSGFOG00000004030 ##22 Passeroidea ANCESTRAL SPECIES 15 ENSGT00940000156683.l.c.a.a.a ENSGT00940000159725.e.b.a.b.a.b ENSGT00940000156683.l.c.b.a.b ENSGT00940000159725.e.b.a.b.a.a.c ENSGT00940000156683.l.d.b ENSGT00940000161193.e.b #29 ENSGT01090000260555 ENSGT00940000161193.e.a.a #29 ENSGT00980000199037 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000163564.a ENSGT00940000163777.b.f ENSGT00390000010712.q #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000165340 ENSGT00950000183162.a.a ENSGT00940000158778 ENSGT00940000159674 ENSGT00940000154108.a ENSGT00940000153169.A.b.a ENSGT00390000008582 ENSGT00390000007844 ENSGT00950000182827.F #12 Common canary MODERN SPECIES 16 ENSSCAG00000008631 ENSSCAG00000008637 ENSSCAG00000008643 ENSSCAG00000008649 PCDHB3 (ENSSCAG00000008661) #29 ENSSCAG00000008730 ENSSCAG00000008748 ENSSCAG00000008752 PCDHAC2 (ENSSCAG00000008754) #25 PCDHAC1 (ENSSCAG00000008756) ENSSCAG00000008761 ENSSCAG00000008764 ENSSCAG00000008767 ZMAT2 (ENSSCAG00000008771) #23 ENSSCAG00000008779 ##22 ENSSCAG00000008794 ##22 APBB3 (ENSSCAG00000008807) #11 SRA1 (ENSSCAG00000008837) #10 ANKHD1 (ENSSCAG00000008848) #9 SLC4A9 (ENSSCAG00000009029) #7 HBEGF (ENSSCAG00000009094) PFDN1 (ENSSCAG00000009109) ENSSCAG00000009115 NRG2 (ENSSCAG00000009124) PSD2 (ENSSCAG00000009151) CXXC5 (ENSSCAG00000009283) UBE2D2 (ENSSCAG00000009289) ENSSCAG00000009301 SLC35A4 (ENSSCAG00000009308) #12 ENSSCAG00000009315 #14 TMCO6 (ENSSCAG00000009320) #16 Flycatcher MODERN SPECIES 39 ENSFALG00000008994 ENSFALG00000027652 #23 ENSFALG00000008984 ##22 African ostrich MODERN SPECIES 961 PCDHGA2 (ENSSCUG00000018017) ENSSCUG00000018019 #29 ENSSCUG00000018026 #29 ENSSCUG00000018035 PCDHAC2 (ENSSCUG00000018037) #25 PCDHAC1 (ENSSCUG00000018040) ENSSCUG00000018042 ENSSCUG00000018043 ENSSCUG00000018045 ZMAT2 (ENSSCUG00000018047) #23 ENSSCUG00000018048 ##22 ENSSCUG00000018061 ##22 DND1 (ENSSCUG00000018063) #20 ENSSCUG00000018065 WDR55 (ENSSCUG00000018069) #19 IK (ENSSCUG00000018072) #17 TMCO6 (ENSSCUG00000018078) #16 ENSSCUG00000018079 #14 SLC35A4 (ENSSCUG00000018080) #12 STING1 (ENSSCUG00000018085) UBE2D2 (ENSSCUG00000018086) CXXC5 (ENSSCUG00000018087) Vertebrata ANCESTRAL SPECIES ENSGT00390000005922.a.b ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00390000005922.a.b ##22 Lamprey MODERN SPECIES 4704 ENSPMAG00000007025 ##22 Gnathostomata ANCESTRAL SPECIES ENSGT00390000005922.a.b ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00390000005922.a.b ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00390000005922.a.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00390000005922.a.b ##22 Amniota ANCESTRAL SPECIES ENSGT00390000005922.a.b ##22 Sauria ANCESTRAL SPECIES ENSGT00390000005922.a.b ##22 Archelosauria ANCESTRAL SPECIES ENSGT00390000005922.a.b ##22 Archosauria ANCESTRAL SPECIES ENSGT00390000005922.a.b ##22 Aves ANCESTRAL SPECIES 15 ENSGT00940000163777.a ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000156683.l.c.a ENSGT00940000159725 ENSGT00940000156683.l.c.b ENSGT00940000161193.e.b #29 ENSGT01090000260555 ENSGT00940000161193.e.a #29 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT01030000235101 ENSGT00940000163564 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a African ostrich MODERN SPECIES 961 PCDHGA2 (ENSSCUG00000018017) ENSSCUG00000018019 #29 ENSSCUG00000018026 #29 ENSSCUG00000018035 PCDHAC2 (ENSSCUG00000018037) #25 PCDHAC1 (ENSSCUG00000018040) ENSSCUG00000018042 ENSSCUG00000018043 ENSSCUG00000018045 ZMAT2 (ENSSCUG00000018047) #23 ENSSCUG00000018048 ##22 ENSSCUG00000018061 ##22 DND1 (ENSSCUG00000018063) #20 ENSSCUG00000018065 WDR55 (ENSSCUG00000018069) #19 IK (ENSSCUG00000018072) #17 TMCO6 (ENSSCUG00000018078) #16 ENSSCUG00000018079 #14 SLC35A4 (ENSSCUG00000018080) #12 STING1 (ENSSCUG00000018085) UBE2D2 (ENSSCUG00000018086) CXXC5 (ENSSCUG00000018087) Neognathae ANCESTRAL SPECIES 14 ENSGT00940000156683.l.c.b.a.b ENSGT00940000159725.e.b.a.b.a.a ENSGT00940000156683.l.d.b ENSGT00940000159725.e.a ENSGT00940000161193.e.b #29 ENSGT01090000260555 ENSGT00940000161193.e.a.a #29 ENSGT00940000165142 ENSGT00940000161193.e.a.b #29 ENSGT00940000160554 #25 ENSGT00940000163564.a ENSGT01030000235101 ENSGT00940000163564.b.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a Galloanserae DUPLICATION Galloanserae ANCESTRAL SPECIES ENSGT00390000005922.a.b.a ##22 Anatidae ANCESTRAL SPECIES ENSGT00390000005922.a.b.a ##22 Duck MODERN SPECIES 2471 ENSAPLG00000013708 ##22 Galloanserae ANCESTRAL SPECIES 14 ENSGT00940000156683.l.c.a ENSGT00940000159725.f ENSGT00940000156683.l.d.b ENSGT00940000161193.e.b #29 ENSGT00940000156683.l.d.a.b ENSGT00940000156683.l.d.a.a ENSGT01040000241462 ENSGT00940000165142 ENSGT00940000161193.e.a.b #29 ENSGT00940000160554 #25 ENSGT00980000198828.a ENSGT01030000235101 ENSGT00940000163564.b.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a Phasianidae ANCESTRAL SPECIES 14 ENSGT00940000164810 ENSGT00940000158869 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00940000160487 ENSGT00940000162232 ENSGT00940000156683.l.c.a ENSGT00940000159725.f ENSGT00940000156683.l.d.b ENSGT00940000156683.l.d.a.b ENSGT00940000160554 #25 ENSGT01030000235101 ENSGT00940000163564.b.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674.f ENSGT00940000158778 Japanese quail MODERN SPECIES 4 HDAC3 (ENSCJPG00005011425) ENSCJPG00005011426 ENSCJPG00005011427 ENSCJPG00005011428 PCDHGC3 (ENSCJPG00005011431) ENSCJPG00005011436 ENSCJPG00005011437 ENSCJPG00005011438 ENSCJPG00005011485 #30 ENSCJPG00005011486 PCDHAC2 (ENSCJPG00005011498) #25 ENSCJPG00005011499 ENSCJPG00005011505 ENSCJPG00005011506 ZMAT2 (ENSCJPG00005011507) #23 ENSCJPG00005011518 ##22 ENSCJPG00005012106 ##22 DND1 (ENSCJPG00005012253) #20 WDR55 (ENSCJPG00005012254) #19 IK (ENSCJPG00005012255) #17 NDUFA2 (ENSCJPG00005012256) #18 TMCO6 (ENSCJPG00005012257) #16 ENSCJPG00005012258 #14 SLC35A4 (ENSCJPG00005012259) #12 ENSCJPG00005012260 STING1 (ENSCJPG00005012261) UBE2D2 (ENSCJPG00005012262) CXXC5 (ENSCJPG00005012265) PSD2 (ENSCJPG00005012267) NRG2 (ENSCJPG00005012340) PURA (ENSCJPG00005012342) Phasianidae_b ANCESTRAL SPECIES 43 ENSGT00940000161193.e.a.b #29 ENSGT00940000163564.b.a ENSGT01030000235101 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00940000174022 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674.f ENSGT00940000158778 Chicken MODERN SPECIES 4 ENSGALG00010011045 ENSGALG00010011036 #29 ENSGALG00010011023 ENSGALG00010011011 ENSGALG00010011005 ENSGALG00010010999 ENSGALG00010012460 PCDHA6 (ENSGALG00010010992) ENSGALG00010012443 ENSGALG00010010969 ENSGALG00010012433 ENSGALG00010012422 ENSGALG00010012418 ENSGALG00010010966 ZMAT2 (ENSGALG00010010957) #23 ENSGALG00010010934 ##22 HARS1 (ENSGALG00010012992) ##22 DND1 (ENSGALG00010010926) #20 WDR55 (ENSGALG00010011726) #19 IK (ENSGALG00010011708) #17 NDUFA2 (ENSGALG00010011685) #18 TMCO6 (ENSGALG00010011670) #16 CD14 (ENSGALG00010011659) #14 ENSGALG00010008095 SLC35A4 (ENSGALG00010008088) #12 TMEM173 (ENSGALG00010011969) UBE2D2 (ENSGALG00010011952) CXXC5 (ENSGALG00010011913) PSD2 (ENSGALG00010011875) NRG2 (ENSGALG00010011853) PURA (ENSGALG00010012412) Anatidae ANCESTRAL SPECIES 15 ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00990000205617 ENSGT00390000005922.b.d #22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674.c ENSGT00940000158778 Pink-footed goose MODERN SPECIES 9 ENSABRG00000014176 ZMAT2 (ENSABRG00000014185) #23 ENSABRG00000014197 ##22 ENSABRG00000014205 ENSABRG00000014208 #22 DND1 (ENSABRG00000014212) #20 WDR55 (ENSABRG00000014221) #19 IK (ENSABRG00000014224) #17 NDUFA2 (ENSABRG00000014237) #18 TMCO6 (ENSABRG00000014248) #16 ENSABRG00000014280 #14 SLC35A4 (ENSABRG00000014284) #12 STING1 (ENSABRG00000014298) UBE2D2 (ENSABRG00000014309) CXXC5 (ENSABRG00000014324) PSD2 (ENSABRG00000014335) NRG2 (ENSABRG00000014354) PURA (ENSABRG00000014361) Duck MODERN SPECIES 2602 ENSAPLG00000023996 ##22 Neognathae_b ANCESTRAL SPECIES 16 ENSGT00940000156683.l.d.b ENSGT00940000159725.e.a.b ENSGT00940000161193.e.b #29 ENSGT01090000260555 ENSGT00940000161193.e.a.a #29 ENSGT00940000165142 ENSGT00940000161193.e.a.b #29 ENSGT00940000160554 #25 ENSGT00980000199037 ENSGT01030000235101.d ENSGT00940000163564.b.a ENSGT01030000235101.c.a ENSGT00940000163564.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT01100000266844 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674 ENSGT00940000158778 Passeriformes ANCESTRAL SPECIES 14 ENSGT00940000156683.l.c.a.a.a ENSGT00940000159725.e.b.a.b.a.b ENSGT00940000156683.l.c.b.a.b ENSGT00940000159725.e.b.a.b.a.a ENSGT00940000156683.l.d.b ENSGT00940000156683.l.d.a.b ENSGT00940000159725.e.b.b ENSGT00940000161193.e.b #29 ENSGT01090000260555 ENSGT00940000161193.e.a.a #29 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000163564.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000165340 ENSGT00950000183162.a.a ENSGT00940000158778 ENSGT00940000159674 ENSGT00940000154108.a ENSGT00940000153169.A.b.a ENSGT00390000008582 ENSGT00390000007844 Great tit MODERN SPECIES 4 PCDH1 (ENSPMJG00000008064) ENSPMJG00000008062 ENSPMJG00000008061 ENSPMJG00000008060 ARAP3 (ENSPMJG00000008055) ENSPMJG00000008052 FCHSD1 (ENSPMJG00000008043) RELL2 (ENSPMJG00000008040) HDAC3 (ENSPMJG00000008036) PCDHGC5 (ENSPMJG00000008025) ENSPMJG00000008018 ENSPMJG00000008015 ENSPMJG00000007976 ENSPMJG00000007975 ZMAT2 (ENSPMJG00000007974) #23 ENSPMJG00000007968 ##22 APBB3 (ENSPMJG00000007966) #11 SRA1 (ENSPMJG00000007965) #10 ANKHD1 (ENSPMJG00000000454) #9 ENSPMJG00000000384 SLC4A9 (ENSPMJG00000000108) #7 HBEGF (ENSPMJG00000000087) PFDN1 (ENSPMJG00000000081) ENSPMJG00000000062 NRG2 (ENSPMJG00000014563) PSD2 (ENSPMJG00000014562) CXXC5 (ENSPMJG00000014559) UBE2D2 (ENSPMJG00000014558) STING1 (ENSPMJG00000014557) ENSPMJG00000014556 SLC35A4 (ENSPMJG00000014555) #12 Passeriformes_d ANCESTRAL SPECIES 15 ENSGT00940000159725.e.b.a.b.b.b ENSGT00940000156683.l.c.a.a.b ENSGT00940000159725.e.b.a.b.a.a ENSGT00940000156683.l.d.b ENSGT00940000156683.l.d.a.b ENSGT00940000159725.e.b.b ENSGT00940000161193.e.b #29 ENSGT01090000260555 ENSGT00940000161193.e.a.a #29 ENSGT00940000165142 ENSGT00940000160554 #25 ENSGT00940000163564.a ENSGT00940000163777.b.f ENSGT00390000010712.q #23 ENSGT00390000010712.r #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000165340 ENSGT00950000183162.a.a ENSGT00940000158778 ENSGT00940000159674 ENSGT00940000154108.a ENSGT00940000153169.A.b.a ENSGT00390000008582 ENSGT00390000007844 Passeriformes_g ANCESTRAL SPECIES 15 ENSGT00940000160403 ENSGT00390000002137 ENSGT00940000155521 ENSGT00940000164810 ENSGT00940000158869 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00940000160487 ENSGT00980000199037 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000163564.a ENSGT00940000163777.b.f ENSGT00390000010712.q #23 ENSGT00390000010712.r #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000165340 ENSGT00950000183162.a.a ENSGT00940000158778 ENSGT00940000159674 ENSGT00940000154108.a ENSGT00940000153169.A.b.a ENSGT00390000008582 ENSGT00390000007844 Passeroidea ANCESTRAL SPECIES 15 ENSGT00940000159725.e.b.a.a.b.a.a.a.a ENSGT00940000156683.l.c.a.a.a ENSGT00940000159725.e.b.a.b.a.b ENSGT00940000156683.l.c.b.a.b ENSGT00940000159725.e.b.a.b.a.a.c ENSGT00940000156683.l.d.b ENSGT00940000161193.e.b #29 ENSGT01090000260555 ENSGT00940000161193.e.a.a #29 ENSGT00980000199037 ENSGT00940000160554 #25 ENSGT00940000165142 ENSGT00940000163564.a ENSGT00940000163777.b.f ENSGT00390000010712.q #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00390000000002.a.a.b #11 ENSGT00390000001803 #10 ENSGT00940000153768.b #9 ENSGT00940000160970 #7 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00940000165340 ENSGT00950000183162.a.a ENSGT00940000158778 ENSGT00940000159674 ENSGT00940000154108.a ENSGT00940000153169.A.b.a ENSGT00390000008582 ENSGT00390000007844 Zebra finch MODERN SPECIES 4 ENSTGUG00000020402 #29 ENSTGUG00000019748 #29 ENSTGUG00000018535 #29 ENSTGUG00000026948 #29 ENSTGUG00000026303 ENSTGUG00000026370 #29 ENSTGUG00000029658 #29 ENSTGUG00000029528 ENSTGUG00000028564 ENSTGUG00000026065 ENSTGUG00000024173 PCDHAC2 (ENSTGUG00000001700) #25 ENSTGUG00000020343 ENSTGUG00000001698 ZMAT2 (ENSTGUG00000001696) #23 ENSTGUG00000001688 ##22 APBB3 (ENSTGUG00000001677) #11 ANKHD1 (ENSTGUG00000001656) #9 SLC4A9 (ENSTGUG00000001638) #7 HBEGF (ENSTGUG00000001634) ENSTGUG00000024812 PFDN1 (ENSTGUG00000001632) ENSTGUG00000001629 PURA (ENSTGUG00000001628) NRG2 (ENSTGUG00000001621) PSD2 (ENSTGUG00000001610) ENSTGUG00000027924 CXXC5 (ENSTGUG00000001608) UBE2D2 (ENSTGUG00000001604) STING1 (ENSTGUG00000001599) ENSTGUG00000022952 Common canary MODERN SPECIES 16 ENSSCAG00000008628 ENSSCAG00000008631 ENSSCAG00000008637 ENSSCAG00000008643 ENSSCAG00000008649 PCDHB3 (ENSSCAG00000008661) #29 ENSSCAG00000008730 ENSSCAG00000008748 ENSSCAG00000008752 PCDHAC2 (ENSSCAG00000008754) #25 PCDHAC1 (ENSSCAG00000008756) ENSSCAG00000008761 ENSSCAG00000008764 ENSSCAG00000008767 ZMAT2 (ENSSCAG00000008771) #23 ENSSCAG00000008779 ##22 ENSSCAG00000008794 ##22 APBB3 (ENSSCAG00000008807) #11 SRA1 (ENSSCAG00000008837) #10 ANKHD1 (ENSSCAG00000008848) #9 SLC4A9 (ENSSCAG00000009029) #7 HBEGF (ENSSCAG00000009094) PFDN1 (ENSSCAG00000009109) ENSSCAG00000009115 NRG2 (ENSSCAG00000009124) PSD2 (ENSSCAG00000009151) CXXC5 (ENSSCAG00000009283) UBE2D2 (ENSSCAG00000009289) ENSSCAG00000009301 SLC35A4 (ENSSCAG00000009308) #12 ENSSCAG00000009315 #14 Neognathae_c ANCESTRAL SPECIES 19 ENSGT00940000158869 ENSGT00510000046732.B ENSGT00940000160541 ENSGT00940000160487 ENSGT00940000162232 ENSGT00940000156683.l.c.b.a.a ENSGT00940000159725.e.b.b ENSGT00940000161193.e.b #29 ENSGT00940000161193.e.a.b #29 ENSGT00940000160554 #25 ENSGT00980000198828.a ENSGT01030000235101.d ENSGT00940000163564.b.a ENSGT00940000163777.b.f ENSGT00390000010712 #23 ENSGT00390000005922.a.b ##22 ENSGT00390000005922.a.a ##22 ENSGT00940000159225 #20 ENSGT00940000153727.a #19 ENSGT00940000153727.b #17 ENSGT00390000006178 #18 ENSGT00390000008104 #16 ENSGT00390000005689 #14 ENSGT00950000182827.F #12 ENSGT00390000007844 ENSGT00390000008582 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674 ENSGT00940000158778 ENSGT00950000183162.a.a Golden eagle MODERN SPECIES 14 ENSACCG00020009405 ENSACCG00020009393 ENSACCG00020009383 ENSACCG00020009356 ENSACCG00020009327 ENSACCG00020009278 ENSACCG00020009271 ENSACCG00020009260 ENSACCG00020009250 ENSACCG00020009241 ENSACCG00020009235 ENSACCG00020009225 ENSACCG00020009216 ENSACCG00020009203 ZMAT2 (ENSACCG00020009186) #23 ENSACCG00020009140 ##22 DND1 (ENSACCG00020009071) #20 WDR55 (ENSACCG00020009049) #19 IK (ENSACCG00020009030) #17 NDUFA2 (ENSACCG00020009004) #18 TMCO6 (ENSACCG00020008973) #16 ENSACCG00020008957 #14 SLC35A4 (ENSACCG00020008945) #12 ENSACCG00020008926 STING1 (ENSACCG00020008906) UBE2D2 (ENSACCG00020008885) CXXC5 (ENSACCG00020008847) PSD2 (ENSACCG00020008814) NRG2 (ENSACCG00020008774) PURA (ENSACCG00020008732) ENSACCG00020008707 Kakapo MODERN SPECIES 6 ENSSHBG00005012204 #29 ENSSHBG00005012195 #29 ENSSHBG00005012184 ENSSHBG00005012168 ENSSHBG00005012153 ENSSHBG00005012134 ENSSHBG00005012121 ENSSHBG00005012107 ENSSHBG00005012095 ENSSHBG00005012083 ENSSHBG00005012069 ENSSHBG00005012058 PCDHAC2 (ENSSHBG00005012025) #25 ENSSHBG00005011984 ZMAT2 (ENSSHBG00005011970) #23 ENSSHBG00005011618 ##22 ENSSHBG00005011498 ##22 DND1 (ENSSHBG00005011474) #20 WDR55 (ENSSHBG00005011454) #19 IK (ENSSHBG00005011411) #17 NDUFA2 (ENSSHBG00005011398) #18 TMCO6 (ENSSHBG00005011351) #16 ENSSHBG00005011387 ENSSHBG00005011314 #14 SLC35A4 (ENSSHBG00005011293) #12 STING1 (ENSSHBG00005011270) UBE2D2 (ENSSHBG00005011252) CXXC5 (ENSSHBG00005011229) PSD2 (ENSSHBG00005010803) NRG2 (ENSSHBG00005010699) PURA (ENSSHBG00005010650) Ciona ANCESTRAL SPECIES 4 ENSGT00550000074901 ENSGT00940000159266 ENSGT00660000097390 ENSGT00940000162058 ENSGT00390000001041 ENSGT00390000005922 #22 ENSGT00510000048509 ENSGT00530000067893 ENSGT00940000167114 ENSGT00980000200668 ENSGT00390000008346 ENSGT00390000014722 ENSGT00730000112750 ENSGT00940000165114 ENSGT00530000065239 ENSGT00660000097448 ENSGT00530000069312 ENSGT00940000168583 ENSGT00940000165029 Ciona intestinalis MODERN SPECIES 6 ENSCING00000023709 ENSCING00000005508 ENSCING00000008645 ENSCING00000008646 ENSCING00000011462 ENSCING00000018027 ENSCING00000008647 ENSCING00000008651 ENSCING00000021839 ENSCING00000022421 ENSCING00000011464 ENSCING00000011465 ENSCING00000011466 ENSCING00000019124 ENSCING00000019874 ENSCING00000008657 #22 ENSCING00000008659 ENSCING00000022050 ENSCING00000008661 ENSCING00000023221 ENSCING00000024061 ENSCING00000018645 ENSCING00000019766 ENSCING00000011468 ENSCING00000011469 ENSCING00000009883 ENSCING00000021779 ENSCING00000008665 ENSCING00000011470 ENSCING00000008666 ENSCING00000008667 Ciona savignyi MODERN SPECIES 113 ENSCSAVG00000010295 ENSCSAVG00000010299 ENSCSAVG00000010339 ENSCSAVG00000010341 ENSCSAVG00000010342 ENSCSAVG00000010343 ENSCSAVG00000010344 ENSCSAVG00000010345 ENSCSAVG00000010365 ENSCSAVG00000010366 ENSCSAVG00000010368 ENSCSAVG00000010369 ENSCSAVG00000010370 ENSCSAVG00000010371 ENSCSAVG00000010373 ENSCSAVG00000010374 #22 ENSCSAVG00000010407 ENSCSAVG00000010415 ENSCSAVG00000010417 ENSCSAVG00000010420 ENSCSAVG00000010422 ENSCSAVG00000010424 ENSCSAVG00000010425 ENSCSAVG00000010429 ENSCSAVG00000010439 ENSCSAVG00000010443 ENSCSAVG00000010446 ENSCSAVG00000010447 ENSCSAVG00000010451 ENSCSAVG00000010454 ENSCSAVG00000010456