Mus	ANCESTRAL SPECIES	13	ENSGT00940000154143.f #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000158837 #9	ENSGT00940000154578.A.d #10	ENSGT00940000154311.a.b #11	ENSGT00940000159893 #12	ENSGT01030000234625.D #13	ENSGT00940000156712 #14	ENSGT00940000156797 #15	ENSGT00940000158470 #16	ENSGT00940000158054 #17	ENSGT00530000062962.a.a #18	ENSGT00940000157879 #19	ENSGT00390000017916 #20	ENSGT00390000012731.a.b #21	ENSGT00940000155248 #22	ENSGT00390000001856 #23	ENSGT01090000259987.b.b.a.b #24	ENSGT00940000154419.b #25	ENSGT00710000106813.A #26	ENSGT00940000160130 #27	ENSGT00940000157406 #28	ENSGT00930000151029 #29	ENSGT00940000158398 #30	ENSGT00390000008796 #31	ENSGT00390000016972.b.j.a.a.c #32	ENSGT00730000111263 #33	ENSGT00940000158330 #34	ENSGT00390000012807 #35	ENSGT00940000160658 #36	ENSGT00680000101538 #37
Mus_A	ANCESTRAL SPECIES	18	ENSGT00940000154143.f #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000158837 #9	ENSGT00940000154578.A.d #10	ENSGT00940000154311.a.b #11	ENSGT00940000159893 #12	ENSGT01030000234625.D #13	ENSGT00940000156712 #14	ENSGT00940000156797 #15	ENSGT00940000158470 #16	ENSGT00940000158054 #17	ENSGT00530000062962.a.a #18	ENSGT00940000157879 #19	ENSGT00390000017916 #20	ENSGT00390000012731.a.b #21	ENSGT00940000155248 #22	ENSGT00390000001856 #23	ENSGT01090000259987.b.b.a.b #24	ENSGT00940000154419.b #25	ENSGT00710000106813.A #26	ENSGT00940000160130 #27	ENSGT00940000157406 #28	ENSGT00930000151029 #29	ENSGT00940000158398 #30	ENSGT00390000008796 #31	ENSGT00390000016972.b.j.a.a.c #32	ENSGT00730000111263 #33	ENSGT00940000158330 #34	ENSGT00390000012807 #35	ENSGT00940000160658 #36	ENSGT00680000101538 #37
Mus_B	DUPLICATION
Mus_B	ANCESTRAL SPECIES	18	ENSGT00940000154143.f #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000158837 #9	ENSGT00940000154578.A.d #10	ENSGT00940000154311.a.b #11	ENSGT00940000159893 #12	ENSGT01030000234625.D #13	ENSGT00940000156712 #14	ENSGT00940000156797 #15	ENSGT00940000158470 #16	ENSGT00940000158054 #17	ENSGT00530000062962.a.a #18	ENSGT00940000157879 #19	ENSGT00390000017916 #20	ENSGT00390000012731.a.b #21	ENSGT00940000155248.v #22	ENSGT00390000001856 #23	ENSGT01090000259987.b.b.a.b #24	ENSGT00940000154419.b #25	ENSGT00710000106813.A #26	ENSGT00940000160130 #27	ENSGT00940000157406 #28	ENSGT00930000151029 #29	ENSGT00940000158398 #30	ENSGT00390000008796 #31	ENSGT00390000016972.b.j.a.a.c #32	ENSGT00730000111263 #33	ENSGT00940000158330 #34	ENSGT00390000012807 #35	ENSGT00940000160658 #36	ENSGT00680000101538 #37
Mouse	MODERN SPECIES	7	Wdr5b (ENSMUSG00000034379) #7	Kpna1 (ENSMUSG00000022905) #8	Parp9 (ENSMUSG00000022906) #9	Dtx3l (ENSMUSG00000049502) #10	Parp14 (ENSMUSG00000034422) #11	Hspbap1 (ENSMUSG00000022849) #12	Slc49a4 (ENSMUSG00000022848) #13	Sema5b (ENSMUSG00000052133) #14	Pdia5 (ENSMUSG00000022844) #15	Sec22a (ENSMUSG00000034473) #16	Adcy5 (ENSMUSG00000022840) #17	Hacd2 (ENSMUSG00000035376) #18	Mylk (ENSMUSG00000022836) #19	Ccdc14 (ENSMUSG00000022833) #20	Ropn1 (ENSMUSG00000022832) #21	Kalrn (ENSMUSG00000061751) #22	Umps (ENSMUSG00000022814) #23	Itgb5 (ENSMUSG00000022817) #24	Muc13 (ENSMUSG00000022824) #25	Heg1 (ENSMUSG00000075254) #26	Slc12a8 (ENSMUSG00000035506) #27	Zfp148 (ENSMUSG00000022811) #28	Snx4 (ENSMUSG00000022808) #29	Osbpl11 (ENSMUSG00000022807) #30	Lmln (ENSMUSG00000022802) #31	Rpl35a (ENSMUSG00000060636) #32	Iqcg (ENSMUSG00000035578) #33	Lrch3 (ENSMUSG00000022801) #34	Fyttd1 (ENSMUSG00000022800) #35	Rubcn (ENSMUSG00000035629) #36	Smbd1 (ENSMUSG00000094430) #37
Mus_C	ANCESTRAL SPECIES	12	ENSGT01050000244950.a.a.a #8	ENSGT00940000158837 #9	ENSGT00940000154578.A.d #10	ENSGT00940000154311.a.b #11	ENSGT00940000159893 #12	ENSGT01030000234625.D #13	ENSGT00940000156712 #14	ENSGT00940000156797 #15	ENSGT00940000158470 #16	ENSGT00940000158054 #17	ENSGT00530000062962.a.a #18	ENSGT00940000157879 #19	ENSGT00390000017916 #20	ENSGT00390000012731.a.b #21	ENSGT00940000155248.u ##22	ENSGT00940000155248.v #22	ENSGT00390000001856 #23	ENSGT01090000259987.b.b.a.b #24	ENSGT00940000154419.b #25	ENSGT00710000106813.A #26	ENSGT00940000160130 #27	ENSGT00940000157406 #28	ENSGT00930000151029 #29	ENSGT00940000158398 #30	ENSGT00390000008796 #31	ENSGT00390000016972.b.j.a.b.a.b.c.a.b.b ##32	ENSGT00730000111263 #33	ENSGT00940000158330 #34	ENSGT00390000012807 #35	ENSGT00940000160658 #36	ENSGT00680000101538 #37
Steppe mouse	MODERN SPECIES	14																ENSMSIG00000011801 #22	Umps (ENSMSIG00000011773) #23	Itgb5 (ENSMSIG00000011712) #24	ENSMSIG00000011690 #26	ENSMSIG00000011673 #26	Slc12a8 (ENSMSIG00000011450) #27	Zfp148 (ENSMSIG00000011371) #28	Snx4 (ENSMSIG00000011319) #29	Osbpl11 (ENSMSIG00000011262) #30	ENSMSIG00000011251	Lmln (ENSMSIG00000011200) #31	ENSMSIG00000011134 ##32	Lrch3 (ENSMSIG00000010936) #34	Fyttd1 (ENSMSIG00000010860) #35	Rubcn (ENSMSIG00000010232) #36	Muc20 (ENSMSIG00000010193)
Mus_B	ANCESTRAL SPECIES																	ENSGT00940000155248.u ##22
Mus_C	ANCESTRAL SPECIES	12	ENSGT00940000154143.f #7	ENSGT01050000244950.a.a.a #8	ENSGT00940000158837 #9	ENSGT00940000154578.A.d #10	ENSGT00940000154311.a.b #11	ENSGT00940000159893 #12	ENSGT01030000234625.D #13	ENSGT00940000156712 #14	ENSGT00940000156797 #15	ENSGT00940000158470 #16	ENSGT00940000158054 #17	ENSGT00530000062962.a.a #18	ENSGT00940000157879 #19	ENSGT00390000017916 #20	ENSGT00390000012731.a.b #21	ENSGT00940000155248.u ##22	ENSGT00940000155248.v #22	ENSGT00390000001856 #23	ENSGT01090000259987.b.b.a.b #24	ENSGT00940000154419.b #25	ENSGT00710000106813.A #26	ENSGT00940000160130 #27	ENSGT00940000157406 #28	ENSGT00930000151029 #29	ENSGT00940000158398 #30	ENSGT00390000008796 #31	ENSGT00390000016972.b.j.a.b.a.b.c.a.b.b ##32	ENSGT00730000111263 #33	ENSGT00940000158330 #34	ENSGT00390000012807 #35	ENSGT00940000160658 #36
spretus	MODERN SPECIES	7	Parp9 (MGP_SPRETEiJ_G0021606) #9	Dtx3l (MGP_SPRETEiJ_G0021605) #10	Parp14 (MGP_SPRETEiJ_G0021604) #11	Hspbap1 (MGP_SPRETEiJ_G0021603) #12	Slc49a4 (MGP_SPRETEiJ_G0021602) #13	Sema5b (MGP_SPRETEiJ_G0021601) #14	Pdia5 (MGP_SPRETEiJ_G0021600) #15	Sec22a (MGP_SPRETEiJ_G0021599) #16	Adcy5 (MGP_SPRETEiJ_G0021598) #17	Hacd2 (MGP_SPRETEiJ_G0021597) #18	Mylk (MGP_SPRETEiJ_G0021596) #19	Ccdc14 (MGP_SPRETEiJ_G0021595) #20	Ropn1 (MGP_SPRETEiJ_G0021594) #21	MGP_SPRETEiJ_G0021593	MGP_SPRETEiJ_G0021592	MGP_SPRETEiJ_G0021591 ##22	Umps (MGP_SPRETEiJ_G0021590) #23	Itgb5 (MGP_SPRETEiJ_G0021589) #24	MGP_SPRETEiJ_G0021588 #25	Heg1 (MGP_SPRETEiJ_G0021587) #26	Slc12a8 (MGP_SPRETEiJ_G0021586) #27	Zfp148 (MGP_SPRETEiJ_G0021585) #28	Snx4 (MGP_SPRETEiJ_G0021584) #29	Osbpl11 (MGP_SPRETEiJ_G0021583) #30	Lmln (MGP_SPRETEiJ_G0021582) #31	MGP_SPRETEiJ_G0021581 ##32	Iqcg (MGP_SPRETEiJ_G0021580) #33	Lrch3 (MGP_SPRETEiJ_G0021579) #34	Fyttd1 (MGP_SPRETEiJ_G0021578) #35	Rubcn (MGP_SPRETEiJ_G0021577) #36	Smbd1 (MGP_SPRETEiJ_G0021576) #37
Steppe mouse	MODERN SPECIES	29				Parp14 (ENSMSIG00000008946) #11	Hspbap1 (ENSMSIG00000009038) #12	ENSMSIG00000009103	Slc49a4 (ENSMSIG00000009195) #13	Sema5b (ENSMSIG00000009235) #14	Pdia5 (ENSMSIG00000009345) #15	Sec22a (ENSMSIG00000009393) #16	Adcy5 (ENSMSIG00000009464) #17	ENSMSIG00000009555 #18	Mylk (ENSMSIG00000009596) #19	Ccdc14 (ENSMSIG00000009685) #20	Ropn1 (ENSMSIG00000009711) #21	ENSMSIG00000009762 ##22
Ryukyu mouse	MODERN SPECIES	7	Wdr5b (MGP_CAROLIEiJ_G0020710) #7	Kpna1 (MGP_CAROLIEiJ_G0020709) #8	Parp9 (MGP_CAROLIEiJ_G0020708) #9	Dtx3l (MGP_CAROLIEiJ_G0020707) #10	Parp14 (MGP_CAROLIEiJ_G0020706) #11	Hspbap1 (MGP_CAROLIEiJ_G0020705) #12	Slc49a4 (MGP_CAROLIEiJ_G0020704) #13	Sema5b (MGP_CAROLIEiJ_G0020703) #14	Pdia5 (MGP_CAROLIEiJ_G0020702) #15	Sec22a (MGP_CAROLIEiJ_G0020701) #16	Adcy5 (MGP_CAROLIEiJ_G0020700) #17	Hacd2 (MGP_CAROLIEiJ_G0020699) #18	Mylk (MGP_CAROLIEiJ_G0020698) #19	Ccdc14 (MGP_CAROLIEiJ_G0020697) #20	Ropn1 (MGP_CAROLIEiJ_G0020696) #21	MGP_CAROLIEiJ_G0020695 #22	Umps (MGP_CAROLIEiJ_G0020694) #23	Itgb5 (MGP_CAROLIEiJ_G0020693) #24	MGP_CAROLIEiJ_G0020692 #25	Heg1 (MGP_CAROLIEiJ_G0020691) #26	Slc12a8 (MGP_CAROLIEiJ_G0020690) #27	Zfp148 (MGP_CAROLIEiJ_G0020689) #28	Snx4 (MGP_CAROLIEiJ_G0020688) #29	Osbpl11 (MGP_CAROLIEiJ_G0020687) #30	Lmln (MGP_CAROLIEiJ_G0020686) #31	Rpl35a (MGP_CAROLIEiJ_G0020685) #32	MGP_CAROLIEiJ_G0020684	Lrch3 (MGP_CAROLIEiJ_G0020683) #34	Fyttd1 (MGP_CAROLIEiJ_G0020682) #35	Rubcn (MGP_CAROLIEiJ_G0020681) #36	Smbd1 (MGP_CAROLIEiJ_G0020680) #37
Shrew mouse	MODERN SPECIES	3	Wdr5b (MGP_PahariEiJ_G0016413) #7	Kpna1 (MGP_PahariEiJ_G0016412) #8	MGP_PahariEiJ_G0016411 #9	Dtx3l (MGP_PahariEiJ_G0016410) #10	Parp14 (MGP_PahariEiJ_G0016409) #11	Hspbap1 (MGP_PahariEiJ_G0016408) #12	Slc49a4 (MGP_PahariEiJ_G0016407) #13	Sema5b (MGP_PahariEiJ_G0016406) #14	Pdia5 (MGP_PahariEiJ_G0016405) #15	Sec22a (MGP_PahariEiJ_G0016404) #16	Adcy5 (MGP_PahariEiJ_G0016403) #17	Hacd2 (MGP_PahariEiJ_G0016402) #18	Mylk (MGP_PahariEiJ_G0016401) #19	Ccdc14 (MGP_PahariEiJ_G0016400) #20	Ropn1 (MGP_PahariEiJ_G0016399) #21	MGP_PahariEiJ_G0016398 #22	Umps (MGP_PahariEiJ_G0016397) #23	Itgb5 (MGP_PahariEiJ_G0016396) #24	MGP_PahariEiJ_G0016395 #25	Heg1 (MGP_PahariEiJ_G0016394) #26	Slc12a8 (MGP_PahariEiJ_G0016393) #27	Zfp148 (MGP_PahariEiJ_G0016392) #28	Snx4 (MGP_PahariEiJ_G0016391) #29	Osbpl11 (MGP_PahariEiJ_G0016390) #30	Lmln (MGP_PahariEiJ_G0016389) #31	MGP_PahariEiJ_G0016388 ##32	MGP_PahariEiJ_G0016387 #33	Lrch3 (MGP_PahariEiJ_G0016386) #34	Fyttd1 (MGP_PahariEiJ_G0016385) #35	Rubcn (MGP_PahariEiJ_G0016384) #36	Smbd1 (MGP_PahariEiJ_G0016383) #37