Euarchontoglires	ANCESTRAL SPECIES		ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT01060000248660	ENSGT00940000158611 #36	ENSGT00530000063777.b
Primates	ANCESTRAL SPECIES	4	ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250
Platyrrhini	ANCESTRAL SPECIES		ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A.f #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00950000182965.a.b.b.b.g.b.a.a ##19	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT01030000234836	ENSGT00940000159250	ENSGT00940000160703
Cebidae	ANCESTRAL SPECIES	1	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A.f #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00950000182965.a.b.b.b.g.b.a.a ##19	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT01030000234836	ENSGT00940000159250	ENSGT00940000160703
Marmoset	MODERN SPECIES	19	GCLM (ENSCJAG00000017899) #7	DNTTIP2 (ENSCJAG00000017896) #8	BCAR3 (ENSCJAG00000017873) #9	FNBP1L (ENSCJAG00000017821) #10	CCDC18 (ENSCJAG00000017774) #11	TMED5 (ENSCJAG00000017759) #12	MTF2 (ENSCJAG00000017687) #13	ENSCJAG00000022564 #14	DIPK1A (ENSCJAG00000017678) #15	ENSCJAG00000017673 #16	ENSCJAG00000076513 #17	ENSCJAG00000014949 #18	ENSCJAG00000079907 #19	ENSCJAG00000073420 #20	EVI5 (ENSCJAG00000017619) #21	GFI1 (ENSCJAG00000017609) #22	ENSCJAG00000022354 #23	RPAP2 (ENSCJAG00000017591) #24	GLMN (ENSCJAG00000017552) #25	C1orf146 (ENSCJAG00000017547) #26	BTBD8 (ENSCJAG00000017540) #27	BRDT (ENSCJAG00000017507) #28	ENSCJAG00000010406 #29	TGFBR3 (ENSCJAG00000001778) #30	CDC7 (ENSCJAG00000045959) #31	ENSCJAG00000038757 #32	HFM1 (ENSCJAG00000001843) #33	ENSCJAG00000075350 #34	ZNF644 (ENSCJAG00000001855) #35	BARHL2 (ENSCJAG00000001885) #36	ENSCJAG00000072305 #37
Cebidae_a	ANCESTRAL SPECIES	81	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A.f #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00950000182965.a.b.b.b.g.b.a.a ##19	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT01030000234836
Bolivian squirrel monkey	MODERN SPECIES	97	ENSSBOG00000024603	ENSSBOG00000018533	ARHGAP29 (ENSSBOG00000021522)	ABCA4 (ENSSBOG00000016235)	ENSSBOG00000019384	GCLM (ENSSBOG00000025418) #7	DNTTIP2 (ENSSBOG00000030305) #8	BCAR3 (ENSSBOG00000020011) #9	FNBP1L (ENSSBOG00000026856) #10	DR1 (ENSSBOG00000021041)	CCDC18 (ENSSBOG00000025896) #11	TMED5 (ENSSBOG00000034141) #12	MTF2 (ENSSBOG00000021350) #13	DIPK1A (ENSSBOG00000020486) #15	EVI5 (ENSSBOG00000021898) #21	GFI1 (ENSSBOG00000031300) #22	RPAP2 (ENSSBOG00000028835) #24	GLMN (ENSSBOG00000011268) #25	ENSSBOG00000024802	C1orf146 (ENSSBOG00000017637) #26	BTBD8 (ENSSBOG00000033979) #27	ENSSBOG00000033324	EPHX4 (ENSSBOG00000029335)	BRDT (ENSSBOG00000020614) #28	ENSSBOG00000026362	ENSSBOG00000032704	TGFBR3 (ENSSBOG00000034519) #30	CDC7 (ENSSBOG00000026796) #31	HFM1 (ENSSBOG00000027456) #33	ZNF644 (ENSSBOG00000025807) #35	BARHL2 (ENSSBOG00000022168) #36
Capuchin	MODERN SPECIES	166	GCLM (ENSCCAG00000017215) #7	ENSCCAG00000019911	DNTTIP2 (ENSCCAG00000025785) #8	BCAR3 (ENSCCAG00000036151) #9	FNBP1L (ENSCCAG00000034576) #10	DR1 (ENSCCAG00000030021)	CCDC18 (ENSCCAG00000030645) #11	TMED5 (ENSCCAG00000036284) #12	MTF2 (ENSCCAG00000037974) #13	ENSCCAG00000026616	ENSCCAG00000031400 ##14	DIPK1A (ENSCCAG00000033496) #15	RPL5 (ENSCCAG00000024885) #16	ENSCCAG00000021472 ##19	EVI5 (ENSCCAG00000034070) #21	GFI1 (ENSCCAG00000036072) #22	RPAP2 (ENSCCAG00000024859) #24	GLMN (ENSCCAG00000038123) #25	C1orf146 (ENSCCAG00000032973) #26	BTBD8 (ENSCCAG00000031364) #27	ENSCCAG00000029619	ENSCCAG00000036616	ENSCCAG00000033925	ENSCCAG00000027791	ENSCCAG00000038015	EPHX4 (ENSCCAG00000029678)	ENSCCAG00000025258	BRDT (ENSCCAG00000031906) #28	ENSCCAG00000022756	TGFBR3 (ENSCCAG00000029516) #30	ENSCCAG00000023085
Mas night monkey	MODERN SPECIES	366												DIPK1A (ENSANAG00000030882) #15	RPL5 (ENSANAG00000030599) #16	ENSANAG00000030407 ##19	EVI5 (ENSANAG00000022148) #21	GFI1 (ENSANAG00000019656) #22	RPAP2 (ENSANAG00000027517) #24	GLMN (ENSANAG00000021000) #25	C1orf146 (ENSANAG00000025057) #26	BTBD8 (ENSANAG00000027755) #27
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142.i #8	ENSGT00510000048142.j #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT01020000230401.b.a.m.b	ENSGT00530000063965.o.a	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142.i #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000164497	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT01020000230401.b.a.m.b	ENSGT00530000063965.o.a	ENSGT00550000075011.c #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142.i #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT01020000230401.b.a.m.b	ENSGT00530000063965.o.a	ENSGT00550000075011.c #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142.i.a #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT01020000230401.b.a.m.b	ENSGT00530000063965.o.a	ENSGT00550000075011.c #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00910000147262	ENSGT00940000158611 #36
Macaca	ANCESTRAL SPECIES		ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142.i.a #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT01020000230401.b.a.m.b	ENSGT00550000075011.c #31	ENSGT00550000074822 #33	ENSGT00420000029746.e.a.b.a.b ##17	ENSGT00940000158258 #35	ENSGT00910000147262	ENSGT00940000158611 #36
Macaca_a	ANCESTRAL SPECIES		ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT01100000264112.a.b	ENSGT00510000047658 #7	ENSGT00510000048142.i.a #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00510000047505.c.b	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00940000154382.a.b #27	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT01020000230401.b.a.m.b	ENSGT00550000075011.c #31	ENSGT00550000074822 #33	ENSGT00420000029746.e.a.b.a.b ##17	ENSGT00940000158258 #35	ENSGT01100000263539.b.a.a.a.b.b.b.a.a.a.a.a	ENSGT00940000161627.a.a.b.a.b	ENSGT00910000147262	ENSGT00940000158611 #36
Rhesus	MODERN SPECIES		ENSMMUG00000045959 ##16	ENSMMUG00000057430	BCAR3 (ENSMMUG00000015924) #9	FNBP1L (ENSMMUG00000015922) #10	CCDC18 (ENSMMUG00000016812) #11	ENSMMUG00000061598	TMED5 (ENSMMUG00000045421) #12	MTF2 (ENSMMUG00000016808) #13	ENSMMUG00000040115	DIPK1A (ENSMMUG00000005073) #15	ENSMMUG00000051009	RPL5 (ENSMMUG00000005072) #16	EVI5 (ENSMMUG00000005070) #21	ENSMMUG00000055525	ENSMMUG00000029649	GFI1 (ENSMMUG00000005068) #22	ENSMMUG00000054856	RPAP2 (ENSMMUG00000010096) #24	GLMN (ENSMMUG00000010095) #25	BTBD8 (ENSMMUG00000007180) #27	SETSIP (ENSMMUG00000019986)	BRDT (ENSMMUG00000014018) #28	TGFBR3 (ENSMMUG00000001742) #30	ENSMMUG00000039930	CDC7 (ENSMMUG00000056970) #31	HFM1 (ENSMMUG00000006819) #33	ENSMMUG00000055740 ##17	ENSMMUG00000061264	ENSMMUG00000056753	ZNF644 (ENSMMUG00000007635) #35	ENSMMUG00000049678
Crab-eating macaque	MODERN SPECIES		ENSMFAG00000042490 ##16	BCAR3 (ENSMFAG00000045481) #9	FNBP1L (ENSMFAG00000007905) #10	DR1 (ENSMFAG00000036672)	ENSMFAG00000048042	CCDC18 (ENSMFAG00000033283) #11	TMED5 (ENSMFAG00000039021) #12	MTF2 (ENSMFAG00000037684) #13	ENSMFAG00000030382	DIPK1A (ENSMFAG00000000290) #15	ENSMFAG00000049451	RPL5 (ENSMFAG00000033619) #16	EVI5 (ENSMFAG00000003592) #21	ENSMFAG00000044701	ENSMFAG00000061073	GFI1 (ENSMFAG00000045801) #22	RPAP2 (ENSMFAG00000031837) #24	GLMN (ENSMFAG00000035560) #25	BTBD8 (ENSMFAG00000003189) #27	EPHX4 (ENSMFAG00000035355)	BRDT (ENSMFAG00000044939) #28	ENSMFAG00000047645	TGFBR3 (ENSMFAG00000002239) #30	ENSMFAG00000000474 #31	ENSMFAG00000003649 #33	ENSMFAG00000048501	ENSMFAG00000060879 ##17	ENSMFAG00000062421	ZNF644 (ENSMFAG00000033902) #35	ENSMFAG00000047958	ENSMFAG00000064076
Pig-tailed macaque	MODERN SPECIES	119	ARHGAP29 (ENSMNEG00000032154)	ABCA4 (ENSMNEG00000032250)	GCLM (ENSMNEG00000044117) #7	ENSMNEG00000041699 #8	ENSMNEG00000015935 ##16	BCAR3 (ENSMNEG00000039069) #9	FNBP1L (ENSMNEG00000043720) #10	DR1 (ENSMNEG00000028696)	CCDC18 (ENSMNEG00000038359) #11	TMED5 (ENSMNEG00000035141) #12	MTF2 (ENSMNEG00000007161) #13	ENSMNEG00000030641	ENSMNEG00000044138 ##16	DIPK1A (ENSMNEG00000030760) #15	EVI5 (ENSMNEG00000015327) #21	GFI1 (ENSMNEG00000036338) #22	RPAP2 (ENSMNEG00000037979) #24	GLMN (ENSMNEG00000037105) #25	C1orf146 (ENSMNEG00000045551) #26	BTBD8 (ENSMNEG00000038289) #27	ENSMNEG00000034427	EPHX4 (ENSMNEG00000034540)	BRDT (ENSMNEG00000036582) #28	TGFBR3 (ENSMNEG00000035095) #30	ENSMNEG00000009729	ENSMNEG00000026624 #31	ENSMNEG00000039833 #33	ENSMNEG00000043710 ##17
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142.i.a #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00940000154891.g.a.a	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT01020000230401.b.a.m.b	ENSGT00530000063965.o.a	ENSGT00550000075011.c #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00910000147262
Olive baboon	MODERN SPECIES		ENSPANG00000013362 #8	ENSPANG00000016856 ##16	BCAR3 (ENSPANG00000003121) #9	FNBP1L (ENSPANG00000021911) #10	DR1 (ENSPANG00000030741)	ENSPANG00000050304	CCDC18 (ENSPANG00000000782) #11	TMED5 (ENSPANG00000009369) #12	MTF2 (ENSPANG00000021262) #13	ENSPANG00000007198	ENSPANG00000043375	DIPK1A (ENSPANG00000020946) #15	RPL5 (ENSPANG00000017672) #16	ENSPANG00000045670	EVI5 (ENSPANG00000012749) #21	GFI1 (ENSPANG00000016433) #22	RPAP2 (ENSPANG00000016897) #24	GLMN (ENSPANG00000024286) #25	C1orf146 (ENSPANG00000020895) #26	BTBD8 (ENSPANG00000005230) #27	SETSIP (ENSPANG00000047435)	EPHX4 (ENSPANG00000011776)	ENSPANG00000042609	ENSPANG00000038317	BRDT (ENSPANG00000007564) #28	TGFBR3 (ENSPANG00000016898) #30	ENSPANG00000042933	CDC7 (ENSPANG00000010804) #31	HFM1 (ENSPANG00000009838) #33	ENSPANG00000050646	ENSPANG00000047029
Cercopithecinae_d	ANCESTRAL SPECIES	127	ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142.i.a #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT01020000230401.b.a.m.b	ENSGT00530000063965.o.a	ENSGT00550000075011.c #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00910000147262	ENSGT00940000158611 #36	ENSGT00530000063777.b
Drill	MODERN SPECIES	456																GFI1 (ENSMLEG00000036181) #22	RPAP2 (ENSMLEG00000033946) #24	GLMN (ENSMLEG00000029964) #25	C1orf146 (ENSMLEG00000029676) #26	BTBD8 (ENSMLEG00000036376) #27
Sooty mangabey	MODERN SPECIES	146	ARHGAP29 (ENSCATG00000037934)	ABCA4 (ENSCATG00000012953)	ENSCATG00000045214	GCLM (ENSCATG00000044922) #7	ENSCATG00000036773 #8	BCAR3 (ENSCATG00000035554) #9	FNBP1L (ENSCATG00000022281) #10	DR1 (ENSCATG00000032935)	CCDC18 (ENSCATG00000007601) #11	TMED5 (ENSCATG00000045099) #12	MTF2 (ENSCATG00000042583) #13	DIPK1A (ENSCATG00000042332) #15	RPL5 (ENSCATG00000040807) #16	EVI5 (ENSCATG00000038124) #21	ENSCATG00000041152	GFI1 (ENSCATG00000037873) #22	RPAP2 (ENSCATG00000032941) #24	GLMN (ENSCATG00000007386) #25	C1orf146 (ENSCATG00000007878) #26	BTBD8 (ENSCATG00000039374) #27	EPHX4 (ENSCATG00000029859)	BRDT (ENSCATG00000036412) #28	TGFBR3 (ENSCATG00000036600) #30	ENSCATG00000023185	ENSCATG00000032234 #31	HFM1 (ENSCATG00000030987) #33	ZNF644 (ENSCATG00000044807) #35	ENSCATG00000023058	BARHL2 (ENSCATG00000041439) #36	ZNF326 (ENSCATG00000045193)	ENSCATG00000006771
Vervet Monkey	MODERN SPECIES	12	ARHGAP29 (ENSCSAG00000001483)	ABCA4 (ENSCSAG00000001482)	GCLM (ENSCSAG00000001481) #7	ENSCSAG00000001480 #8	ENSCSAG00000000157 ##16	BCAR3 (ENSCSAG00000001479) #9	FNBP1L (ENSCSAG00000001478) #10	DR1 (ENSCSAG00000001477)	CCDC18 (ENSCSAG00000001476) #11	TMED5 (ENSCSAG00000001475) #12	MTF2 (ENSCSAG00000001474) #13	DIPK1A (ENSCSAG00000001472) #15	ENSCSAG00000001471 ##16	EVI5 (ENSCSAG00000001470) #21	ENSCSAG00000000156	GFI1 (ENSCSAG00000001469) #22	RPAP2 (ENSCSAG00000001468) #24	GLMN (ENSCSAG00000001467) #25	C1orf146 (ENSCSAG00000001466) #26	BTBD8 (ENSCSAG00000001465) #27	ENSCSAG00000001464	ENSCSAG00000000155	EPHX4 (ENSCSAG00000001463)	BRDT (ENSCSAG00000001462) #28	TGFBR3 (ENSCSAG00000001461) #30	CDC7 (ENSCSAG00000001460) #31	HFM1 (ENSCSAG00000001459) #33	ZNF644 (ENSCSAG00000001458) #35	BARHL2 (ENSCSAG00000001457) #36	ZNF326 (ENSCSAG00000001456)	LRRC8D (ENSCSAG00000000154)
Rhinopithecus	ANCESTRAL SPECIES	378																ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000164497	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT01020000230401.b.a.m.b	ENSGT00530000063965.o.a	ENSGT00550000075011.c #31	ENSGT00550000074822 #33
Black snub-nosed monkey	MODERN SPECIES	2427																GFI1 (ENSRBIG00000036467) #22	RPAP2 (ENSRBIG00000038463) #24	GLMN (ENSRBIG00000044112) #25	C1orf146 (ENSRBIG00000043686) #26	BTBD8 (ENSRBIG00000038233) #27	CEMIP2 (ENSRBIG00000022748)	ABHD17B (ENSRBIG00000028955)	C9orf85 (ENSRBIG00000001173)	ENSRBIG00000036053
Golden snub-nosed monkey	MODERN SPECIES	779																GFI1 (ENSRROG00000031687) #22
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142.j #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT01020000230401.b.a.m.b	ENSGT00530000063965.o.a	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b
Hominidae	ANCESTRAL SPECIES	3	ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142.j #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT01020000230401.b.a.m.b	ENSGT00530000063965.o.a	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142.j #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT01020000230401.b.a.m.b	ENSGT00530000063965.o.a	ENSGT00550000075011 #31	ENSGT00940000155807.a.b	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36
Gorilla	MODERN SPECIES		ABCD3 (ENSGGOG00000009815)	ARHGAP29 (ENSGGOG00000002269)	ABCA4 (ENSGGOG00000008804)	GCLM (ENSGGOG00000016426) #7	DNTTIP2 (ENSGGOG00000000575) #8	BCAR3 (ENSGGOG00000001635) #9	FNBP1L (ENSGGOG00000015943) #10	DR1 (ENSGGOG00000028511)	CCDC18 (ENSGGOG00000016744) #11	TMED5 (ENSGGOG00000016111) #12	MTF2 (ENSGGOG00000001308) #13	ENSGGOG00000043223 ##16	DIPK1A (ENSGGOG00000000881) #15	RPL5 (ENSGGOG00000002699) #16	EVI5 (ENSGGOG00000024347) #21	GFI1 (ENSGGOG00000005320) #22	RPAP2 (ENSGGOG00000006674) #24	GLMN (ENSGGOG00000006658) #25	C1orf146 (ENSGGOG00000006653) #26	ENSGGOG00000000596 #27	ENSGGOG00000013288	EPHX4 (ENSGGOG00000000116)	BRDT (ENSGGOG00000022996) #28	TGFBR3 (ENSGGOG00000000922) #30	ENSGGOG00000003216	ENSGGOG00000041760	CDC7 (ENSGGOG00000007545) #31	FEN1 (ENSGGOG00000022237)	HFM1 (ENSGGOG00000038524) #33	ZNF644 (ENSGGOG00000004186) #35	ENSGGOG00000008873 #36
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142.j #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT01020000230401.b.a.m.b	ENSGT00550000075011 #31	ENSGT00940000155807.a.b	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b
Human	MODERN SPECIES		F3 (ENSG00000117525)	ABCD3 (ENSG00000117528)	ARHGAP29 (ENSG00000137962)	ABCA4 (ENSG00000198691)	GCLM (ENSG00000023909) #7	DNTTIP2 (ENSG00000067334) #8	BCAR3 (ENSG00000137936) #9	FNBP1L (ENSG00000137942) #10	DR1 (ENSG00000117505)	CCDC18 (ENSG00000122483) #11	TMED5 (ENSG00000117500) #12	MTF2 (ENSG00000143033) #13	DIPK1A (ENSG00000154511) #15	RPL5 (ENSG00000122406) #16	EVI5 (ENSG00000067208) #21	GFI1 (ENSG00000162676) #22	RPAP2 (ENSG00000122484) #24	GLMN (ENSG00000174842) #25	C1orf146 (ENSG00000203910) #26	BTBD8 (ENSG00000189195) #27	SETSIP (ENSG00000230667)	EPHX4 (ENSG00000172031)	BRDT (ENSG00000137948) #28	TGFBR3 (ENSG00000069702) #30	CDC7 (ENSG00000097046) #31	HFM1 (ENSG00000162669) #33	ZNF644 (ENSG00000122482) #35	BARHL2 (ENSG00000143032) #36	ZNF326 (ENSG00000162664)	LRRC8D (ENSG00000171492)	LRRC8C (ENSG00000171488)
Pan	ANCESTRAL SPECIES		ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142.j #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.b.a.a #16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT01020000230401.b.a.m.b	ENSGT00550000075011 #31	ENSGT00940000155807.a.b	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b
Bonobo	MODERN SPECIES		F3 (ENSPPAG00000033102)	ABCD3 (ENSPPAG00000039827)	ARHGAP29 (ENSPPAG00000020199)	ABCA4 (ENSPPAG00000035606)	GCLM (ENSPPAG00000042369) #7	DNTTIP2 (ENSPPAG00000044098) #8	BCAR3 (ENSPPAG00000029140) #9	FNBP1L (ENSPPAG00000029809) #10	DR1 (ENSPPAG00000027265)	CCDC18 (ENSPPAG00000029331) #11	TMED5 (ENSPPAG00000027553) #12	MTF2 (ENSPPAG00000030002) #13	DIPK1A (ENSPPAG00000043970) #15	RPL5 (ENSPPAG00000027174) #16	EVI5 (ENSPPAG00000034071) #21	GFI1 (ENSPPAG00000042186) #22	RPAP2 (ENSPPAG00000035306) #24	GLMN (ENSPPAG00000039704) #25	C1orf146 (ENSPPAG00000034258) #26	ENSPPAG00000004959 #27	ENSPPAG00000025213	EPHX4 (ENSPPAG00000040443)	BRDT (ENSPPAG00000033868) #28	TGFBR3 (ENSPPAG00000027020) #30	ENSPPAG00000035448	CDC7 (ENSPPAG00000024798) #31	ENSPPAG00000042415	HFM1 (ENSPPAG00000024582) #33	ZNF644 (ENSPPAG00000039400) #35	BARHL2 (ENSPPAG00000034283) #36	ZNF326 (ENSPPAG00000014161)
Chimpanzee	MODERN SPECIES		F3 (ENSPTRG00000000977)	ABCD3 (ENSPTRG00000000976)	ARHGAP29 (ENSPTRG00000000975)	ABCA4 (ENSPTRG00000023377)	GCLM (ENSPTRG00000000973) #7	DNTTIP2 (ENSPTRG00000000972) #8	BCAR3 (ENSPTRG00000000971) #9	FNBP1L (ENSPTRG00000000970) #10	DR1 (ENSPTRG00000000969)	CCDC18 (ENSPTRG00000000967) #11	TMED5 (ENSPTRG00000000966) #12	MTF2 (ENSPTRG00000000965) #13	DIPK1A (ENSPTRG00000000964) #15	RPL5 (ENSPTRG00000000963) #16	EVI5 (ENSPTRG00000000962) #21	GFI1 (ENSPTRG00000043053) #22	RPAP2 (ENSPTRG00000000960) #24	GLMN (ENSPTRG00000000959) #25	C1H1orf146 (ENSPTRG00000030530) #26	KIAA1107 (ENSPTRG00000000958) #27	BTBD8 (ENSPTRG00000000956)	SETSIP (ENSPTRG00000052188)	EPHX4 (ENSPTRG00000000955)	BRDT (ENSPTRG00000000954) #28	TGFBR3 (ENSPTRG00000000952) #30	ENSPTRG00000046708	CDC7 (ENSPTRG00000043247) #31	ENSPTRG00000046089	HFM1 (ENSPTRG00000000948) #33	ZNF644 (ENSPTRG00000000947) #35	BARHL2 (ENSPTRG00000000946) #36
Orangutan	MODERN SPECIES		F3 (ENSPPYG00000001139)	ABCD3 (ENSPPYG00000001140)	ARHGAP29 (ENSPPYG00000001141)	ABCA4 (ENSPPYG00000001142)	GCLM (ENSPPYG00000032580) #7	DNTTIP2 (ENSPPYG00000030204) #8	BCAR3 (ENSPPYG00000001145) #9	FNBP1L (ENSPPYG00000001146) #10	DR1 (ENSPPYG00000001147)	CCDC18 (ENSPPYG00000001148) #11	TMED5 (ENSPPYG00000030133) #12	MTF2 (ENSPPYG00000001150) #13	DIPK1A (ENSPPYG00000001151) #15	RPL5 (ENSPPYG00000001152) #16	EVI5 (ENSPPYG00000001153) #21	GFI1 (ENSPPYG00000029385) #22	RPAP2 (ENSPPYG00000001154) #24	GLMN (ENSPPYG00000001155) #25	C1orf146 (ENSPPYG00000001156) #26	BTBD8 (ENSPPYG00000029907) #27	EPHX4 (ENSPPYG00000001158)	BRDT (ENSPPYG00000001159) #28	TGFBR3 (ENSPPYG00000001160) #30	ENSPPYG00000001161	ENSPPYG00000039807	CDC7 (ENSPPYG00000001162) #31	HFM1 (ENSPPYG00000001163) #33	ENSPPYG00000034790 ##16	ZNF644 (ENSPPYG00000001164) #35	BARHL2 (ENSPPYG00000001165) #36	ZNF326 (ENSPPYG00000001166)
Gibbon	MODERN SPECIES	2	ABCD3 (ENSNLEG00000011044)	ARHGAP29 (ENSNLEG00000010961)	ABCA4 (ENSNLEG00000010897)	GCLM (ENSNLEG00000010871) #7	DNTTIP2 (ENSNLEG00000010816) #8	BCAR3 (ENSNLEG00000010748) #9	FNBP1L (ENSNLEG00000010681) #10	DR1 (ENSNLEG00000010667)	CCDC18 (ENSNLEG00000010606) #11	TMED5 (ENSNLEG00000010590) #12	MTF2 (ENSNLEG00000010513) #13	ENSNLEG00000032162	DIPK1A (ENSNLEG00000010507) #15	RPL5 (ENSNLEG00000010500) #16	EVI5 (ENSNLEG00000010486) #21	GFI1 (ENSNLEG00000010470) #22	RPAP2 (ENSNLEG00000010446) #24	GLMN (ENSNLEG00000010431) #25	C1orf146 (ENSNLEG00000010426) #26	ENSNLEG00000010418 #27	ENSNLEG00000010412	ENSNLEG00000028497	EPHX4 (ENSNLEG00000010405)	BRDT (ENSNLEG00000010376) #28	TGFBR3 (ENSNLEG00000010335) #30	ENSNLEG00000030279	ENSNLEG00000029575	ENSNLEG00000033782	CDC7 (ENSNLEG00000010319) #31	HFM1 (ENSNLEG00000010285) #33	ENSNLEG00000034677
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B
Lemuriformes	ANCESTRAL SPECIES		ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250
Lemuriformes_a	ANCESTRAL SPECIES	39	ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703
Greater bamboo lemur	MODERN SPECIES	556	ABCD3 (ENSPSMG00000013980)	ARHGAP29 (ENSPSMG00000014189)	ABCA4 (ENSPSMG00000014392)	GCLM (ENSPSMG00000014490) #7	DNTTIP2 (ENSPSMG00000014510) #8	BCAR3 (ENSPSMG00000014546) #9	FNBP1L (ENSPSMG00000014651) #10	ENSPSMG00000014687	DR1 (ENSPSMG00000014696)	CCDC18 (ENSPSMG00000014808) #11	TMED5 (ENSPSMG00000014878) #12	MTF2 (ENSPSMG00000015020) #13	DIPK1A (ENSPSMG00000015215) #15	ENSPSMG00000015298 ##16	EVI5 (ENSPSMG00000015410) #21	GFI1 (ENSPSMG00000015439) #22	RPAP2 (ENSPSMG00000015467) #24	GLMN (ENSPSMG00000015491) #25	C1orf146 (ENSPSMG00000015518) #26	BTBD8 (ENSPSMG00000015550) #27	EPHX4 (ENSPSMG00000015559)	BRDT (ENSPSMG00000015627) #28	TGFBR3 (ENSPSMG00000015750) #30	CDC7 (ENSPSMG00000015799) #31	HFM1 (ENSPSMG00000015833) #33	ZNF644 (ENSPSMG00000015882) #35	BARHL2 (ENSPSMG00000015901) #36	ENSPSMG00000015909
Coquerels sifaka	MODERN SPECIES	846	ABCD3 (ENSPCOG00000028862)	ARHGAP29 (ENSPCOG00000013337)	ABCA4 (ENSPCOG00000027304)	GCLM (ENSPCOG00000000314) #7	DNTTIP2 (ENSPCOG00000027395) #8	BCAR3 (ENSPCOG00000022810) #9	FNBP1L (ENSPCOG00000027233) #10	DR1 (ENSPCOG00000025924)	CCDC18 (ENSPCOG00000021464) #11	TMED5 (ENSPCOG00000024672) #12	MTF2 (ENSPCOG00000021106) #13	DIPK1A (ENSPCOG00000022059) #15	ENSPCOG00000012924 ##16	EVI5 (ENSPCOG00000013584) #21	ENSPCOG00000023529	GFI1 (ENSPCOG00000020540) #22	RPAP2 (ENSPCOG00000021860) #24	GLMN (ENSPCOG00000026708) #25	C1orf146 (ENSPCOG00000014518) #26	BTBD8 (ENSPCOG00000012403) #27	ENSPCOG00000020190	ENSPCOG00000025445	EPHX4 (ENSPCOG00000015391)	BRDT (ENSPCOG00000009857) #28	TGFBR3 (ENSPCOG00000020128) #30	CDC7 (ENSPCOG00000022992) #31	ENSPCOG00000026252 #33	ZNF644 (ENSPCOG00000021784) #35	BARHL2 (ENSPCOG00000021096) #36	ZNF326 (ENSPCOG00000023736)	LRRC8D (ENSPCOG00000013095)
Mouse lemur	MODERN SPECIES	11	ARHGAP29 (ENSMICG00000016038)	ABCA4 (ENSMICG00000013270)	GCLM (ENSMICG00000035919) #7	ENSMICG00000013230 #8	BCAR3 (ENSMICG00000010096) #9	FNBP1L (ENSMICG00000035486) #10	DR1 (ENSMICG00000028249)	ENSMICG00000032766	ENSMICG00000014932 #11	ENSMICG00000043917	TMED5 (ENSMICG00000000964) #12	ENSMICG00000003126 #13	DIPK1A (ENSMICG00000011814) #15	ENSMICG00000011805 ##16	EVI5 (ENSMICG00000011788) #21	GFI1 (ENSMICG00000047208) #22	ENSMICG00000044808 #24	GLMN (ENSMICG00000008891) #25	C1orf146 (ENSMICG00000008888) #26	BTBD8 (ENSMICG00000033675) #27	ENSMICG00000031257	EPHX4 (ENSMICG00000030659)	BRDT (ENSMICG00000014306) #28	TGFBR3 (ENSMICG00000044508) #30	ENSMICG00000031496	CDC7 (ENSMICG00000011588) #31	HFM1 (ENSMICG00000037935) #33	ZNF644 (ENSMICG00000015207) #35	BARHL2 (ENSMICG00000037198) #36	ZNF326 (ENSMICG00000016516)	ENSMICG00000048113
Bushbaby	MODERN SPECIES	125	ABCD3 (ENSOGAG00000009581)	ARHGAP29 (ENSOGAG00000014656)	ABCA4 (ENSOGAG00000014632)	GCLM (ENSOGAG00000014630) #7	DNTTIP2 (ENSOGAG00000027537) #8	BCAR3 (ENSOGAG00000011230) #9	FNBP1L (ENSOGAG00000011225) #10	DR1 (ENSOGAG00000005967)	CCDC18 (ENSOGAG00000006059) #11	TMED5 (ENSOGAG00000015057) #12	MTF2 (ENSOGAG00000002432) #13	ENSOGAG00000030106	DIPK1A (ENSOGAG00000013249) #15	RPL5 (ENSOGAG00000013246) #16	EVI5 (ENSOGAG00000013240) #21	GFI1 (ENSOGAG00000027913) #22	ENSOGAG00000001009 #24	ENSOGAG00000001008 #25	C1orf146 (ENSOGAG00000001007) #26	BTBD8 (ENSOGAG00000028985) #27	ENSOGAG00000001005	ENSOGAG00000029908	ENSOGAG00000034632	EPHX4 (ENSOGAG00000001002)	BRDT (ENSOGAG00000001001) #28	ENSOGAG00000029718	TGFBR3 (ENSOGAG00000016364) #30	CDC7 (ENSOGAG00000029298) #31	ENSOGAG00000034533	HFM1 (ENSOGAG00000032369) #33	ZNF644 (ENSOGAG00000000665) #35
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT01060000248660	ENSGT00940000158611 #36	ENSGT00530000063777.b
Glires	ANCESTRAL SPECIES		ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT01060000248660	ENSGT00940000158611 #36	ENSGT00530000063777.b
Lagomorpha	ANCESTRAL SPECIES	1	ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703
Rabbit	MODERN SPECIES	4	ARHGAP29 (ENSOCUG00000009819)	ABCA4 (ENSOCUG00000009797)	GCLM (ENSOCUG00000013796) #7	DNTTIP2 (ENSOCUG00000008212) #8	BCAR3 (ENSOCUG00000015440) #9	FNBP1L (ENSOCUG00000008277) #10	ENSOCUG00000028085	ENSOCUG00000038039	DR1 (ENSOCUG00000007398)	CCDC18 (ENSOCUG00000012434) #11	TMED5 (ENSOCUG00000012427) #12	MTF2 (ENSOCUG00000013736) #13	DIPK1A (ENSOCUG00000027778) #15	ENSOCUG00000010089 ##16	EVI5 (ENSOCUG00000001807) #21	GFI1 (ENSOCUG00000023553) #22	RPAP2 (ENSOCUG00000001804) #24	ENSOCUG00000001803 #25	C1orf146 (ENSOCUG00000003953) #26	ENSOCUG00000021982	BTBD8 (ENSOCUG00000011062) #27	EPHX4 (ENSOCUG00000017476)	BRDT (ENSOCUG00000017466) #28	TGFBR3 (ENSOCUG00000016083) #30	CDC7 (ENSOCUG00000026347) #31	ENSOCUG00000024863	HFM1 (ENSOCUG00000029252) #33	ENSOCUG00000036391	ENSOCUG00000005209 #35	BARHL2 (ENSOCUG00000004213) #36	ZNF326 (ENSOCUG00000012291)
Pika	MODERN SPECIES	2697															EVI5 (ENSOPRG00000001484) #21	GFI1 (ENSOPRG00000001473) #22
Rodentia	ANCESTRAL SPECIES		ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT01060000248660	ENSGT00940000158611 #36	ENSGT00530000063777.b
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT01060000248660	ENSGT00940000158611 #36	ENSGT00530000063777.b
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00950000183210.d.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT01060000248660	ENSGT00940000158611 #36	ENSGT00530000063777.b
Muroidea	ANCESTRAL SPECIES	6	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000164947	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT01060000248660	ENSGT00940000158611 #36	ENSGT00530000063777.b
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C	ENSGT00390000005102	ENSGT00940000156471.a	ENSGT00730000114722	ENSGT00910000144269	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000164947	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT01060000248660	ENSGT00940000158611 #36	ENSGT00530000063777.b
Murinae	ANCESTRAL SPECIES	12	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C	ENSGT00390000005102	ENSGT00940000156471.a	ENSGT00730000114722	ENSGT00910000144269	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000164947	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B
Mus	ANCESTRAL SPECIES	14	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C	ENSGT00390000005102	ENSGT00940000156471.a	ENSGT00730000114722	ENSGT00910000144269	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000164947	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285.k #26	ENSGT00390000008285.l #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b
Mus_A	ANCESTRAL SPECIES	6	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C	ENSGT00390000005102	ENSGT00940000156471.a	ENSGT00730000114722	ENSGT00910000144269	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000164947	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285.k #26	ENSGT00390000008285.l #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b
Mus_B	ANCESTRAL SPECIES	4	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C	ENSGT00390000005102	ENSGT00940000156471.a	ENSGT00730000114722	ENSGT00910000144269	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000164947	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285.k #26	ENSGT00390000008285.l #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b
Mouse	MODERN SPECIES	14	Cplx1 (ENSMUSG00000033615)	Pcgf3 (ENSMUSG00000033623)	Mfsd7a (ENSMUSG00000029490)	Atp5k (ENSMUSG00000050856)	Pde6b (ENSMUSG00000029491)	Gm42517 (ENSMUSG00000105867)	Pigg (ENSMUSG00000029263)	Dr1 (ENSMUSG00000029265)	Ccdc18 (ENSMUSG00000056531) #11	Tmed5 (ENSMUSG00000063406) #12	Mtf2 (ENSMUSG00000029267) #13	Dipk1a (ENSMUSG00000029270) #15	Rpl5 (ENSMUSG00000058558) ##16	Ube2d2b (ENSMUSG00000063447)	Evi5 (ENSMUSG00000011831) #21	Gfi1 (ENSMUSG00000029275) #22	Rpap2 (ENSMUSG00000033773) #24	Glmn (ENSMUSG00000029276) #25	1700028K03Rik (ENSMUSG00000089798) #26	Gm42669 (ENSMUSG00000106631)	Btbd8 (ENSMUSG00000111375) #27	Lpcat2b (ENSMUSG00000033794)	Ephx4 (ENSMUSG00000033805)	Brdt (ENSMUSG00000029279) #28	Tgfbr3 (ENSMUSG00000029287) #30	Cdc7 (ENSMUSG00000029283) #31	Hfm1 (ENSMUSG00000043410) #33	Zfp644 (ENSMUSG00000049606) #35	Barhl2 (ENSMUSG00000034384) #36	Zfp326 (ENSMUSG00000029290)	Lrrc8d (ENSMUSG00000046079)
Mus_C	ANCESTRAL SPECIES	4	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C	ENSGT00390000005102	ENSGT00940000156471.a	ENSGT00730000114722	ENSGT00910000144269	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000164947	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285.k #26	ENSGT00390000008285.l #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b
spretus	MODERN SPECIES	14	Gak (MGP_SPRETEiJ_G0028522)	Cplx1 (MGP_SPRETEiJ_G0028521)	Pcgf3 (MGP_SPRETEiJ_G0028520)	Mfsd7a (MGP_SPRETEiJ_G0028519)	Atp5k (MGP_SPRETEiJ_G0028518)	Pde6b (MGP_SPRETEiJ_G0028517)	Pigg (MGP_SPRETEiJ_G0028516)	Dr1 (MGP_SPRETEiJ_G0028515)	Ccdc18 (MGP_SPRETEiJ_G0028514) #11	Tmed5 (MGP_SPRETEiJ_G0028513) #12	Mtf2 (MGP_SPRETEiJ_G0028512) #13	Dipk1a (MGP_SPRETEiJ_G0028511) #15	Rpl5 (MGP_SPRETEiJ_G0028510) ##16	Ube2d2b (MGP_SPRETEiJ_G0028509)	Evi5 (MGP_SPRETEiJ_G0028508) #21	Gfi1 (MGP_SPRETEiJ_G0028507) #22	Rpap2 (MGP_SPRETEiJ_G0028506) #24	Glmn (MGP_SPRETEiJ_G0028505) #25	1700028K03Rik (MGP_SPRETEiJ_G0028504) #26	MGP_SPRETEiJ_G0028503 #26	MGP_SPRETEiJ_G0028502 #27	MGP_SPRETEiJ_G0028501	Lpcat2b (MGP_SPRETEiJ_G0028500)	Ephx4 (MGP_SPRETEiJ_G0028499)	Brdt (MGP_SPRETEiJ_G0028498) #28	Tgfbr3 (MGP_SPRETEiJ_G0028497) #30	Cdc7 (MGP_SPRETEiJ_G0028496) #31	Hfm1 (MGP_SPRETEiJ_G0028495) #33	Zfp644 (MGP_SPRETEiJ_G0028494) #35	MGP_SPRETEiJ_G0028493	Barhl2 (MGP_SPRETEiJ_G0028492) #36
Steppe mouse	MODERN SPECIES	3278	ENSMSIG00000020698	Pde6b (ENSMSIG00000020631)	ENSMSIG00000020619	Gm42517 (ENSMSIG00000020614)	Pigg (ENSMSIG00000020443)	Dr1 (ENSMSIG00000020419)	ENSMSIG00000020415	Ccdc18 (ENSMSIG00000020376) #11	Tmed5 (ENSMSIG00000020304) #12	Mtf2 (ENSMSIG00000020200) #13	ENSMSIG00000020174	Dipk1a (ENSMSIG00000020148) #15	Rpl5 (ENSMSIG00000020111) ##16	Ube2d2b (ENSMSIG00000020104)	Evi5 (ENSMSIG00000020061) #21	Gfi1 (ENSMSIG00000020015) #22	Rpap2 (ENSMSIG00000019128) #24	Glmn (ENSMSIG00000019032) #25	1700028K03Rik (ENSMSIG00000019009) #26	ENSMSIG00000019000	Btbd8 (ENSMSIG00000018850) #27	Lpcat2b (ENSMSIG00000018846)	Ephx4 (ENSMSIG00000018816)	Brdt (ENSMSIG00000018799) #28	Tgfbr3 (ENSMSIG00000018764) #30	Cdc7 (ENSMSIG00000018634) #31	Hfm1 (ENSMSIG00000018431) #33	Zfp644 (ENSMSIG00000018329) #35	Barhl2 (ENSMSIG00000018312) #36	Zfp326 (ENSMSIG00000018258)	Lrrc8d (ENSMSIG00000018253)
Ryukyu mouse	MODERN SPECIES	14	Gak (MGP_CAROLIEiJ_G0027523)	Cplx1 (MGP_CAROLIEiJ_G0027522)	Pcgf3 (MGP_CAROLIEiJ_G0027521)	Mfsd7a (MGP_CAROLIEiJ_G0027520)	Atp5k (MGP_CAROLIEiJ_G0027519)	Pde6b (MGP_CAROLIEiJ_G0027518)	Pigg (MGP_CAROLIEiJ_G0027517)	Dr1 (MGP_CAROLIEiJ_G0027516)	Ccdc18 (MGP_CAROLIEiJ_G0027515) #11	Tmed5 (MGP_CAROLIEiJ_G0027514) #12	MGP_CAROLIEiJ_G0027513 #13	Dipk1a (MGP_CAROLIEiJ_G0027512) #15	Rpl5 (MGP_CAROLIEiJ_G0027511) ##16	Ube2d2b (MGP_CAROLIEiJ_G0027510)	Evi5 (MGP_CAROLIEiJ_G0027509) #21	Gfi1 (MGP_CAROLIEiJ_G0027508) #22	Rpap2 (MGP_CAROLIEiJ_G0027507) #24	Glmn (MGP_CAROLIEiJ_G0027506) #25	1700028K03Rik (MGP_CAROLIEiJ_G0027505) #26	MGP_CAROLIEiJ_G0027504 #26	MGP_CAROLIEiJ_G0027503 #27	MGP_CAROLIEiJ_G0027502	Lpcat2b (MGP_CAROLIEiJ_G0027501)	Ephx4 (MGP_CAROLIEiJ_G0027500)	Brdt (MGP_CAROLIEiJ_G0027499) #28	Tgfbr3 (MGP_CAROLIEiJ_G0027498) #30	Cdc7 (MGP_CAROLIEiJ_G0027497) #31	Hfm1 (MGP_CAROLIEiJ_G0027496) #33	Zfp644 (MGP_CAROLIEiJ_G0027495) #35	Barhl2 (MGP_CAROLIEiJ_G0027494) #36	Zfp326 (MGP_CAROLIEiJ_G0027493)
Shrew mouse	MODERN SPECIES	4	Cplx1 (MGP_PahariEiJ_G0017295)	Pcgf3 (MGP_PahariEiJ_G0017294)	Mfsd7a (MGP_PahariEiJ_G0017293)	Atp5k (MGP_PahariEiJ_G0017292)	Pde6b (MGP_PahariEiJ_G0017291)	Pigg (MGP_PahariEiJ_G0017290)	Dr1 (MGP_PahariEiJ_G0017289)	Ccdc18 (MGP_PahariEiJ_G0017288) #11	Tmed5 (MGP_PahariEiJ_G0017287) #12	Mtf2 (MGP_PahariEiJ_G0017286) #13	Dipk1a (MGP_PahariEiJ_G0017285) #15	Rpl5 (MGP_PahariEiJ_G0017284) ##16	Ube2d2b (MGP_PahariEiJ_G0017283)	Evi5 (MGP_PahariEiJ_G0017282) #21	MGP_PahariEiJ_G0017281	Gfi1 (MGP_PahariEiJ_G0017280) #22	Rpap2 (MGP_PahariEiJ_G0017279) #24	Glmn (MGP_PahariEiJ_G0017278) #25	1700028K03Rik (MGP_PahariEiJ_G0017277) #26	MGP_PahariEiJ_G0017276 #26	MGP_PahariEiJ_G0017275 #27	MGP_PahariEiJ_G0017274	Lpcat2b (MGP_PahariEiJ_G0017273)	Ephx4 (MGP_PahariEiJ_G0017272)	Brdt (MGP_PahariEiJ_G0017271) #28	Tgfbr3 (MGP_PahariEiJ_G0017270) #30	Cdc7 (MGP_PahariEiJ_G0017269) #31	Hfm1 (MGP_PahariEiJ_G0017268) #33	Zfp644 (MGP_PahariEiJ_G0017267) #35	Barhl2 (MGP_PahariEiJ_G0017266) #36	MGP_PahariEiJ_G0017265
Rat	MODERN SPECIES	5	Gak (ENSRNOG00000000048)	Pcgf3 (ENSRNOG00000000062)	Slc49a3 (ENSRNOG00000023937)	Atp5me (ENSRNOG00000000064)	Pde6b (ENSRNOG00000000065)	Pigg (ENSRNOG00000071170)	Dr1 (ENSRNOG00000000070)	Ccdc18 (ENSRNOG00000024545) #11	Tmed5 (ENSRNOG00000000073) #12	Mtf2 (ENSRNOG00000000075) #13	Dipk1a (ENSRNOG00000023533) #15	Rpl5 (ENSRNOG00000023529) ##16	Evi5 (ENSRNOG00000002039) #21	LOC108352688 (ENSRNOG00000068623)	Ube2d2b (ENSRNOG00000063388)	Gfi1 (ENSRNOG00000002042) #22	Rpap2 (ENSRNOG00000023484) #24	Glmn (ENSRNOG00000002054) #25	C14h1orf146 (ENSRNOG00000047876) #26	Btbd8 (ENSRNOG00000023446) #27	Lpcat2b (ENSRNOG00000055849)	Ephx4 (ENSRNOG00000023389)	Brdt (ENSRNOG00000002073) #28	Tgfbr3 (ENSRNOG00000002093) #30	Cdc7 (ENSRNOG00000002105) #31	LOC690138 (ENSRNOG00000064883)	Hfm1 (ENSRNOG00000023299) #33	Zfp644 (ENSRNOG00000002112) #35	ENSRNOG00000070225	Barhl2 (ENSRNOG00000002117) #36	Zfp326 (ENSRNOG00000047761)
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C	ENSGT00390000005102	ENSGT00940000156471.a	ENSGT00730000114722	ENSGT00910000144269	ENSGT00550000075010.i.b	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000164947	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT01060000248660	ENSGT00940000158611 #36	ENSGT00530000063777.b
Cricetinae	ANCESTRAL SPECIES	50	ENSGT00940000159527	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C	ENSGT00390000005102	ENSGT00940000156471.a	ENSGT00910000144269	ENSGT00550000075010.i.b	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000164947	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT01060000248660	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B
Chinese hamster chok1gshd	MODERN SPECIES	229	Pcgf3 (ENSCGRG00001011904)	Mfsd7a (ENSCGRG00001015734)	Atp5k (ENSCGRG00001009513)	Pde6b (ENSCGRG00001015377)	Pigg (ENSCGRG00001017797)	ENSCGRG00001014204	ENSCGRG00001017631	Ccdc18 (ENSCGRG00001018990) #11	Tmed5 (ENSCGRG00001024936) #12	Mtf2 (ENSCGRG00001009422) #13	ENSCGRG00001004002	Dipk1a (ENSCGRG00001004793) #15	ENSCGRG00001025004 ##16	Ube2d2b (ENSCGRG00001003528)	Evi5 (ENSCGRG00001022415) #21	Gfi1 (ENSCGRG00001015432) #22	Rpap2 (ENSCGRG00001024341) #24	Glmn (ENSCGRG00001001035) #25	1700028K03Rik (ENSCGRG00001012792) #26	Btbd8 (ENSCGRG00001022491) #27	Lpcat2b (ENSCGRG00001005519)	Ephx4 (ENSCGRG00001001386)	Brdt (ENSCGRG00001024776) #28	Tgfbr3 (ENSCGRG00001014911) #30	Cdc7 (ENSCGRG00001010556) #31	Hfm1 (ENSCGRG00001016995) #33	Zfp644 (ENSCGRG00001019117) #35	Barhl2 (ENSCGRG00001015439) #36	ENSCGRG00001014669	Zfp326 (ENSCGRG00001001292)	Lrrc8d (ENSCGRG00001002696)
Golden Hamster	MODERN SPECIES	689	Cplx1 (ENSMAUG00000013358)	Pcgf3 (ENSMAUG00000018210)	Mfsd7a (ENSMAUG00000008667)	ENSMAUG00000019145	Pde6b (ENSMAUG00000018594)	Pigg (ENSMAUG00000012910)	ENSMAUG00000010844	Ccdc18 (ENSMAUG00000006968) #11	Tmed5 (ENSMAUG00000013238) #12	Mtf2 (ENSMAUG00000016120) #13	Dipk1a (ENSMAUG00000003577) #15	Rpl5 (ENSMAUG00000011020) ##16	Ube2d2b (ENSMAUG00000008501)	ENSMAUG00000008132	Evi5 (ENSMAUG00000016967) #21	ENSMAUG00000021273 #22	ENSMAUG00000022098 #24	ENSMAUG00000006064 #25	1700028K03Rik (ENSMAUG00000003755) #26	Btbd8 (ENSMAUG00000021368) #27	Lpcat2b (ENSMAUG00000007842)	Ephx4 (ENSMAUG00000009231)	Brdt (ENSMAUG00000013483) #28	Tgfbr3 (ENSMAUG00000017737) #30	Cdc7 (ENSMAUG00000018713) #31	Hfm1 (ENSMAUG00000018858) #33	Zfp644 (ENSMAUG00000019393) #35	ENSMAUG00000016699	Barhl2 (ENSMAUG00000013573) #36	Zfp326 (ENSMAUG00000020840)	Lrrc8d (ENSMAUG00000012239)
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C	ENSGT00390000005102	ENSGT00940000156471.a	ENSGT00730000114722	ENSGT00910000144269	ENSGT00550000075010.i.b	ENSGT00940000153190.A #11	ENSGT00940000155468 #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000164947	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT01060000248660	ENSGT00940000158611 #36	ENSGT00530000063777.b
Prairie vole	MODERN SPECIES	349	ENSMOCG00000020467	Cplx1 (ENSMOCG00000013426)	Pcgf3 (ENSMOCG00000004681)	Mfsd7a (ENSMOCG00000021949)	ENSMOCG00000004631	Pde6b (ENSMOCG00000021100)	Pigg (ENSMOCG00000008921)	Dr1 (ENSMOCG00000018088)	Ccdc18 (ENSMOCG00000014483) #11	Tmed5 (ENSMOCG00000018586) #12	Mtf2 (ENSMOCG00000001192) #13	Dipk1a (ENSMOCG00000021898) #15	ENSMOCG00000018015 ##16	ENSMOCG00000003175	ENSMOCG00000008605 #21	ENSMOCG00000004478 #22	ENSMOCG00000012852 #24	Glmn (ENSMOCG00000005897) #25	1700028K03Rik (ENSMOCG00000013743) #26	ENSMOCG00000018136 #27	ENSMOCG00000016302	Lpcat2b (ENSMOCG00000015435)	Ephx4 (ENSMOCG00000013407)	Brdt (ENSMOCG00000018633) #28	Tgfbr3 (ENSMOCG00000009350) #30	Cdc7 (ENSMOCG00000010463) #31	Hfm1 (ENSMOCG00000014812) #33	Zfp644 (ENSMOCG00000013871) #35	ENSMOCG00000004988	Barhl2 (ENSMOCG00000014500) #36	ENSMOCG00000012017
Northern American deer mouse	MODERN SPECIES	1	Pcgf3 (ENSPEMG00000020597)	Mfsd7a (ENSPEMG00000020866)	ENSPEMG00000021488	Pde6b (ENSPEMG00000023203)	Gm42517 (ENSPEMG00000024623)	Pigg (ENSPEMG00000022476)	Dr1 (ENSPEMG00000030546)	Ccdc18 (ENSPEMG00000024210) #11	Tmed5 (ENSPEMG00000021997) #12	Mtf2 (ENSPEMG00000021201) #13	Dipk1a (ENSPEMG00000000699) #15	Rpl5 (ENSPEMG00000023054) ##16	ENSPEMG00000026172	Ube2d2b (ENSPEMG00000028655)	Evi5 (ENSPEMG00000016471) #21	Gfi1 (ENSPEMG00000024396) #22	Rpap2 (ENSPEMG00000022421) #24	Glmn (ENSPEMG00000023068) #25	1700028K03Rik (ENSPEMG00000021512) #26	Btbd8 (ENSPEMG00000014093) #27	ENSPEMG00000021654	Lpcat2b (ENSPEMG00000015365)	Ephx4 (ENSPEMG00000022572)	ENSPEMG00000029986	Brdt (ENSPEMG00000022451) #28	Tgfbr3 (ENSPEMG00000022511) #30	Cdc7 (ENSPEMG00000022245) #31	Hfm1 (ENSPEMG00000022852) #33	ENSPEMG00000030938	ENSPEMG00000024502	Zfp644 (ENSPEMG00000014688) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	526								Ccdc18 (ENSNGAG00000019567) #11	Tmed5 (ENSNGAG00000014311) #12	ENSNGAG00000016494 #13	ENSNGAG00000002131	Dipk1a (ENSNGAG00000014701) #15	Rpl5 (ENSNGAG00000017991) ##16	Ube2d2b (ENSNGAG00000018182)	ENSNGAG00000006125 #21	ENSNGAG00000002549 #22	ENSNGAG00000015570 #24	ENSNGAG00000002782 #25	1700028K03Rik (ENSNGAG00000022230) #26	ENSNGAG00000019904	Btbd8 (ENSNGAG00000022166) #27	Ephx4 (ENSNGAG00000003952)	Brdt (ENSNGAG00000016921) #28	Tgfbr3 (ENSNGAG00000019749) #30	Cdc7 (ENSNGAG00000014479) #31	ENSNGAG00000007826	Hfm1 (ENSNGAG00000011080) #33	Zfp644 (ENSNGAG00000017595) #35	ENSNGAG00000016460	Barhl2 (ENSNGAG00000015074) #36	Zfp326 (ENSNGAG00000019330)
Lesser Egyptian jerboa	MODERN SPECIES	52							Bcar3 (ENSJJAG00000023051) #9	Fnbp1l (ENSJJAG00000022895) #10	ENSJJAG00000004897	Ccdc18 (ENSJJAG00000005309) #11	ENSJJAG00000017003 #12	Mtf2 (ENSJJAG00000002393) #13	Dipk1a (ENSJJAG00000020255) #15	ENSJJAG00000019168 ##16	ENSJJAG00000000431 #21	ENSJJAG00000022622 #22	ENSJJAG00000012247 #24	Glmn (ENSJJAG00000015862) #25	1700028K03Rik (ENSJJAG00000006929) #26	Btbd8 (ENSJJAG00000023838) #27	ENSJJAG00000024014	Ephx4 (ENSJJAG00000021224)	Brdt (ENSJJAG00000016191) #28	Tgfbr3 (ENSJJAG00000017313) #30	Cdc7 (ENSJJAG00000015046) #31	Hfm1 (ENSJJAG00000017198) #33	Zfp644 (ENSJJAG00000016137) #35	Barhl2 (ENSJJAG00000011319) #36	ENSJJAG00000000694	Zfp326 (ENSJJAG00000019314)	Lrrc8d (ENSJJAG00000000640)
Kangaroo rat	MODERN SPECIES	358	F3 (ENSDORG00000023704)	Abcd3 (ENSDORG00000003729)	Arhgap29 (ENSDORG00000005953)	Abca4 (ENSDORG00000000345)	Gclm (ENSDORG00000006111) #7	ENSDORG00000023662 #8	Bcar3 (ENSDORG00000006624) #9	Fnbp1l (ENSDORG00000006623) #10	Dr1 (ENSDORG00000029179)	Ccdc18 (ENSDORG00000004844) #11	Tmed5 (ENSDORG00000029519) #12	Mtf2 (ENSDORG00000028633) #13	Dipk1a (ENSDORG00000005676) #15	Rpl5 (ENSDORG00000005674) ##16	Evi5 (ENSDORG00000004209) #21	ENSDORG00000023443 #22	ENSDORG00000012030 #24	Glmn (ENSDORG00000012023) #25	ENSDORG00000005618 #27	ENSDORG00000005617	Ephx4 (ENSDORG00000006679)	Brdt (ENSDORG00000016543) #28	Tgfbr3 (ENSDORG00000009482) #30	Cdc7 (ENSDORG00000014664) #31	Hfm1 (ENSDORG00000014661) #33	Zfp644 (ENSDORG00000026900) #35	Barhl2 (ENSDORG00000011499) #36	Zfp326 (ENSDORG00000014049)	ENSDORG00000000376	Lrrc8c (ENSDORG00000026385)	Lrrc8b (ENSDORG00000010331)
Rodentia_A	ANCESTRAL SPECIES		ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468.l.a #12	ENSGT00940000155468.l.b #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250
Hystricomorpha	ANCESTRAL SPECIES	23	ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468.l.b.a.a #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b.w.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B
Hystricomorpha_a	ANCESTRAL SPECIES	14	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468.l.b.a.a #12	ENSGT00940000155468.l.b.b #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b.w.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B
Hystricomorpha_b	ANCESTRAL SPECIES	6	ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468.l.b.b #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b.w.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B
Long-tailed chinchilla	MODERN SPECIES	130	ARHGAP29 (ENSCLAG00000004627)	ABCA4 (ENSCLAG00000005461)	GCLM (ENSCLAG00000005983) #7	DNTTIP2 (ENSCLAG00000006829) #8	BCAR3 (ENSCLAG00000007644) #9	FNBP1L (ENSCLAG00000008001) #10	DR1 (ENSCLAG00000009918)	CCDC18 (ENSCLAG00000004649) #11	TMED5 (ENSCLAG00000007030) #12	MTF2 (ENSCLAG00000007846) #13	ENSCLAG00000008285	ENSCLAG00000017681	DIPK1A (ENSCLAG00000008376) #15	ENSCLAG00000008425 ##16	EVI5 (ENSCLAG00000008558) #21	GFI1 (ENSCLAG00000005915) #22	RPAP2 (ENSCLAG00000006291) #24	GLMN (ENSCLAG00000006922) #25	C1orf146 (ENSCLAG00000008485) #26	BTBD8 (ENSCLAG00000005766) #27	ENSCLAG00000006057	EPHX4 (ENSCLAG00000006155)	BRDT (ENSCLAG00000006404) #28	TGFBR3 (ENSCLAG00000007233) #30	CDC7 (ENSCLAG00000007469) #31	HFM1 (ENSCLAG00000005173) #33	ZNF644 (ENSCLAG00000006797) #35	BARHL2 (ENSCLAG00000004382) #36	ZNF326 (ENSCLAG00000004446)	LRRC8D (ENSCLAG00000017652)	LRRC8C (ENSCLAG00000004887)
Degu	MODERN SPECIES	115	ENSODEG00000006568 #9	ENSODEG00000006845 #9	FNBP1L (ENSODEG00000006211) #10	ENSODEG00000019152	ENSODEG00000019219	DR1 (ENSODEG00000006106)	ENSODEG00000019300	CCDC18 (ENSODEG00000005096) #11	ENSODEG00000004565	TMED5 (ENSODEG00000005461) #12	MTF2 (ENSODEG00000005685) #13	ENSODEG00000019282	DIPK1A (ENSODEG00000006544) #15	ENSODEG00000005413 ##16	ENSODEG00000006057 #21	ENSODEG00000006410 #22	ENSODEG00000004664	ENSODEG00000004891 #24	GLMN (ENSODEG00000005188) #25	C1orf146 (ENSODEG00000005893) #26	ENSODEG00000019394	BTBD8 (ENSODEG00000006488) #27	ENSODEG00000007844	ENSODEG00000005277	EPHX4 (ENSODEG00000005661)	BRDT (ENSODEG00000006335) #28	ENSODEG00000005197	ENSODEG00000019153	TGFBR3 (ENSODEG00000005656) #30	CDC7 (ENSODEG00000007352) #31	ENSODEG00000006243 #33
Guinea pig	MODERN SPECIES	2	F3 (ENSCPOG00000002092)	ABCD3 (ENSCPOG00000002087)	ARHGAP29 (ENSCPOG00000015466)	ABCA4 (ENSCPOG00000015461)	ENSCPOG00000037468 #7	ENSCPOG00000031630 #8	BCAR3 (ENSCPOG00000005604) #9	FNBP1L (ENSCPOG00000005155) #10	DR1 (ENSCPOG00000033199)	CCDC18 (ENSCPOG00000037069) #11	ENSCPOG00000032129 #12	MTF2 (ENSCPOG00000012184) #13	DIPK1A (ENSCPOG00000000700) #15	ENSCPOG00000032453 ##16	EVI5 (ENSCPOG00000006917) #21	GFI1 (ENSCPOG00000011727) #22	RPAP2 (ENSCPOG00000007163) #24	GLMN (ENSCPOG00000007152) #25	C1orf146 (ENSCPOG00000007147) #26	BTBD8 (ENSCPOG00000008296) #27	ENSCPOG00000012159	EPHX4 (ENSCPOG00000001758)	ENSCPOG00000003841 #28	TGFBR3 (ENSCPOG00000007217) #30	CDC7 (ENSCPOG00000012756) #31	HFM1 (ENSCPOG00000007421) #33	ZNF644 (ENSCPOG00000035010) #35	BARHL2 (ENSCPOG00000019619) #36	ZNF326 (ENSCPOG00000007332)	LRRC8D (ENSCPOG00000008295)	LRRC8C (ENSCPOG00000033092)
Naked mole-rat female	MODERN SPECIES	10	ENSHGLG00000016483 #8	BCAR3 (ENSHGLG00000009405) #9	FNBP1L (ENSHGLG00000033036) #10	ENSHGLG00000004219	CCDC18 (ENSHGLG00000004402) #11	ENSHGLG00000032551	ENSHGLG00000006551 #12	ENSHGLG00000007932 #13	ENSHGLG00000049269	ENSHGLG00000045561	ENSHGLG00000004684 #15	ENSHGLG00000004717 ##16	ENSHGLG00000006656 ##16	EVI5 (ENSHGLG00000005267) #21	ENSHGLG00000047533	GFI1 (ENSHGLG00000008020) #22	ENSHGLG00000046873	RPAP2 (ENSHGLG00000009983) #24	ENSHGLG00000011940 #25	ENSHGLG00000012510 #26	ENSHGLG00000012851	BTBD8 (ENSHGLG00000008571) #27	ENSHGLG00000046149	ENSHGLG00000033060	ENSHGLG00000010230	BRDT (ENSHGLG00000004317) #28	ENSHGLG00000046123	ENSHGLG00000004997 #30	CDC7 (ENSHGLG00000046565) #31	HFM1 (ENSHGLG00000007780) #33	ZNF644 (ENSHGLG00000008786) #35
Sciuridae	ANCESTRAL SPECIES		ENSGT00390000012668	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468.l.a #12	ENSGT00950000183180.b #13	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250
Marmotini	ANCESTRAL SPECIES	77	ENSGT00950000183110.b.b.g	ENSGT00950000183110.b.b.h.a	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468.l.a #12	ENSGT00950000183180.b #13	ENSGT00390000016988.a.a.a.a.a.a.b	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250
Alpin marmot	MODERN SPECIES	70	ENSMMMG00000023996	GCLM (ENSMMMG00000023997) #7	DNTTIP2 (ENSMMMG00000023998) #8	ENSMMMG00000023999	BCAR3 (ENSMMMG00000024000) #9	FNBP1L (ENSMMMG00000024001) #10	DR1 (ENSMMMG00000024003)	ENSMMMG00000024004	CCDC18 (ENSMMMG00000024006) #11	TMED5 (ENSMMMG00000024010) #12	ENSMMMG00000024011 #13	ENSMMMG00000024013	DIPK1A (ENSMMMG00000024014) #15	ENSMMMG00000024016 ##16	EVI5 (ENSMMMG00000024020) #21	GFI1 (ENSMMMG00000024023) #22	RPAP2 (ENSMMMG00000024024) #24	GLMN (ENSMMMG00000024029) #25	C1orf146 (ENSMMMG00000024030) #26	BTBD8 (ENSMMMG00000024032) #27	ENSMMMG00000024033	EPHX4 (ENSMMMG00000024034)	ENSMMMG00000024035 #28	ENSMMMG00000024036	ENSMMMG00000024037 #28	TGFBR3 (ENSMMMG00000024040) #30	CDC7 (ENSMMMG00000024042) #31	HFM1 (ENSMMMG00000024043) #33	ZNF644 (ENSMMMG00000024044) #35	BARHL2 (ENSMMMG00000024045) #36	ZNF326 (ENSMMMG00000024046)
Marmotini_b	ANCESTRAL SPECIES	116	ENSGT00950000183110.b.b.g	ENSGT00950000183110.b.b.h.a	ENSGT00940000155624.b	ENSGT00510000047658 #7	ENSGT00510000048142 #8	ENSGT00940000154130.a.a.b #9	ENSGT00950000183047.c.b #10	ENSGT00550000075010	ENSGT00940000153190.A #11	ENSGT00940000155468.l.a #12	ENSGT00950000183180.b #13	ENSGT00390000016988.a.a.a.a.a.a.b	ENSGT00390000006452.b.b #15	ENSGT00950000183210.d.a.c.a.a.b ##16	ENSGT00940000153846.a.a #21	ENSGT00940000156166.a #22	ENSGT00390000017965 #24	ENSGT00390000018446 #25	ENSGT00390000008285 #26	ENSGT00940000154382.a.b #27	ENSGT00950000182892.a.b.a.b.a	ENSGT00940000156233	ENSGT00940000154549.a #28	ENSGT00530000063861.b.b #30	ENSGT00550000075011 #31	ENSGT00550000074822 #33	ENSGT00940000158258 #35	ENSGT00940000158611 #36	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250
Squirrel	MODERN SPECIES	137	ENSSTOG00000000308	ENSSTOG00000033918	ENSSTOG00000034098	ABCA4 (ENSSTOG00000000294)	ENSSTOG00000030847 #7	DNTTIP2 (ENSSTOG00000027499) #8	ENSSTOG00000014735 #9	FNBP1L (ENSSTOG00000014723) #10	DR1 (ENSSTOG00000014720)	CCDC18 (ENSSTOG00000000234) #11	TMED5 (ENSSTOG00000028196) #12	MTF2 (ENSSTOG00000000231) #13	DIPK1A (ENSSTOG00000023846) #15	ENSSTOG00000010256 ##16	EVI5 (ENSSTOG00000015190) #21	GFI1 (ENSSTOG00000014583) #22	ENSSTOG00000030075 #24	GLMN (ENSSTOG00000022944) #25	C1orf146 (ENSSTOG00000012506) #26	BTBD8 (ENSSTOG00000027118) #27	ENSSTOG00000012470	EPHX4 (ENSSTOG00000022582)	ENSSTOG00000003060 #28	TGFBR3 (ENSSTOG00000011061) #30	CDC7 (ENSSTOG00000002130) #31	ENSSTOG00000008477 #33	ZNF644 (ENSSTOG00000027631) #35	BARHL2 (ENSSTOG00000025888) #36	ZNF326 (ENSSTOG00000005176)	LRRC8D (ENSSTOG00000005165)	LRRC8C (ENSSTOG00000010193)
Arctic ground squirrel	MODERN SPECIES	283			ENSUPAG00010006957	GCLM (ENSUPAG00010007006) #7	DNTTIP2 (ENSUPAG00010007018) #8	BCAR3 (ENSUPAG00010007024) #9	FNBP1L (ENSUPAG00010007070) #10	DR1 (ENSUPAG00010007132)	CCDC18 (ENSUPAG00010007139) #11	TMED5 (ENSUPAG00010007183) #12	MTF2 (ENSUPAG00010007198) #13	ENSUPAG00010007245	DIPK1A (ENSUPAG00010007249) #15	ENSUPAG00010007265 ##16	EVI5 (ENSUPAG00010007304) #21	GFI1 (ENSUPAG00010007431) #22	RPAP2 (ENSUPAG00010007445) #24	GLMN (ENSUPAG00010007467) #25	C1orf146 (ENSUPAG00010007546) #26	BTBD8 (ENSUPAG00010007564) #27	EPHX4 (ENSUPAG00010007597)	ENSUPAG00010007607 #28	ENSUPAG00010007618	ENSUPAG00010007622 #28	TGFBR3 (ENSUPAG00010007630) #30	CDC7 (ENSUPAG00010007656) #31	HFM1 (ENSUPAG00010007727) #33
Eurasian red squirrel	MODERN SPECIES		GCLM (ENSSVLG00005000523) #7	DNTTIP2 (ENSSVLG00005000490) #8	BCAR3 (ENSSVLG00005000445) #9	ENSSVLG00005000405	FNBP1L (ENSSVLG00005000352) #10	DR1 (ENSSVLG00005000282)	CCDC18 (ENSSVLG00005000256) #11	TMED5 (ENSSVLG00005000211) #12	ENSSVLG00005000190	MTF2 (ENSSVLG00005000167) #13	ENSSVLG00005000125	ENSSVLG00005000089	DIPK1A (ENSSVLG00005004374) #15	ENSSVLG00005004298 ##16	EVI5 (ENSSVLG00005004175) #21	GFI1 (ENSSVLG00005004132) #22	ENSSVLG00005004104	RPAP2 (ENSSVLG00005004082) #24	GLMN (ENSSVLG00005004063) #25	C1orf146 (ENSSVLG00005004047) #26	BTBD8 (ENSSVLG00005003975) #27	EPHX4 (ENSSVLG00005003946)	BRDT (ENSSVLG00005003821) #28	TGFBR3 (ENSSVLG00005003738) #30	CDC7 (ENSSVLG00005003704) #31	ENSSVLG00005003691	ENSSVLG00005003666 #33	ENSSVLG00005003646	ZNF644 (ENSSVLG00005003587) #35	BARHL2 (ENSSVLG00005003545) #36	ZNF326 (ENSSVLG00005003520)