Rodentia_B	ANCESTRAL SPECIES	37	ENSGT00940000162285 #10	ENSGT01030000234883 #11	ENSGT00940000156018.A #12	ENSGT00940000162806 #13	ENSGT00940000166941	ENSGT00610000086173 #14	ENSGT00390000015368.a.a #15	ENSGT00940000161872 #16	ENSGT00390000004001 #17	ENSGT00950000183049.C #18	ENSGT00390000018395 #19	ENSGT00940000155914 #20	ENSGT00940000156705 #21	ENSGT00530000064192	ENSGT00940000153593.c.b.k ##22	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926 #30	ENSGT01030000234515.b #31	ENSGT00390000003478 #32	ENSGT00730000111231 #33	ENSGT00940000158081 #34	ENSGT00410000025695.b #35	ENSGT00390000002913 #36	ENSGT00940000158163 #37
Myomorpha	ANCESTRAL SPECIES	43	ENSGT00940000158959.b #9	ENSGT00940000162285 #10	ENSGT01030000234883 #11	ENSGT00940000156018.A #12	ENSGT00940000162806 #13	ENSGT00610000086173 #14	ENSGT00390000015368.a.a #15	ENSGT00940000161872 #16	ENSGT00390000004001 #17	ENSGT00950000183049.C #18	ENSGT00390000018395 #19	ENSGT00940000155914 #20	ENSGT00940000156705 #21	ENSGT00530000064192	ENSGT00940000153593.c.b.k ##22	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926 #30	ENSGT01030000234515.b #31	ENSGT00390000003478 #32	ENSGT00730000111231 #33	ENSGT00940000158081 #34	ENSGT00410000025695.b #35	ENSGT00390000002913 #36	ENSGT00940000158163 #37
Muroidea	ANCESTRAL SPECIES	47	ENSGT00390000010450 #7	ENSGT00940000160620 #8	ENSGT00940000158959.b #9	ENSGT00940000162285 #10	ENSGT01030000234883 #11	ENSGT00940000156018.A #12	ENSGT00940000162806 #13	ENSGT00610000086173 #14	ENSGT00390000015368.a.a #15	ENSGT00940000161872 #16	ENSGT00390000004001 #17	ENSGT00950000183049.C #18	ENSGT00390000018395 #19	ENSGT00940000155914 #20	ENSGT00940000156705 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926 #30	ENSGT01030000234515.b #31	ENSGT00390000003478 #32	ENSGT00730000111231 #33	ENSGT00940000158081 #34	ENSGT00410000025695.b #35	ENSGT00390000002913 #36	ENSGT00940000158163 #37
Muroidea_A	ANCESTRAL SPECIES	28	ENSGT00390000010450 #7	ENSGT00940000160620 #8	ENSGT00940000158959.b #9	ENSGT00940000162285 #10	ENSGT01030000234883 #11	ENSGT00940000156018.A #12	ENSGT00940000162806 #13	ENSGT00610000086173 #14	ENSGT00390000015368.a.a #15	ENSGT00940000161872 #16	ENSGT00390000004001 #17	ENSGT00950000183049.C #18	ENSGT00390000018395 #19	ENSGT00940000155914 #20	ENSGT00940000156705 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926 #30	ENSGT01030000234515.b #31	ENSGT00390000003478 #32	ENSGT00730000111231 #33	ENSGT00940000158081 #34	ENSGT00410000025695.b #35	ENSGT00390000002913 #36	ENSGT00940000158163 #37
Cricetidae	ANCESTRAL SPECIES	30	ENSGT00390000010450 #7	ENSGT00940000160620 #8	ENSGT00940000158959.b #9	ENSGT00940000162285 #10	ENSGT01030000234883 #11	ENSGT00940000156018.A #12	ENSGT00940000162806 #13	ENSGT00610000086173 #14	ENSGT00390000015368.a.a #15	ENSGT00940000161872 #16	ENSGT00390000004001 #17	ENSGT00950000183049.C #18	ENSGT00390000018395 #19	ENSGT00940000155914 #20	ENSGT00940000156705 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926 #30	ENSGT01030000234515.b #31	ENSGT00390000003478 #32	ENSGT00730000111231 #33	ENSGT00940000158081 #34	ENSGT00410000025695.b #35	ENSGT00390000002913 #36	ENSGT00940000158163 #37
Cricetidae_B	ANCESTRAL SPECIES	17	ENSGT00390000010450 #7	ENSGT00940000160620 #8	ENSGT00940000158959.b #9	ENSGT00940000162285 #10	ENSGT01030000234883 #11	ENSGT00940000156018.A #12	ENSGT00940000162806 #13	ENSGT00610000086173 #14	ENSGT00390000015368.a.a #15	ENSGT00940000161872 #16	ENSGT00390000004001 #17	ENSGT00950000183049.C #18	ENSGT00390000018395 #19	ENSGT00940000155914 #20	ENSGT00940000156705 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926 #30	ENSGT01030000234515.b #31	ENSGT00390000003478 #32	ENSGT00730000111231 #33	ENSGT00940000158081 #34	ENSGT00410000025695.b #35	ENSGT00390000002913 #36	ENSGT00940000158163 #37
Prairie vole	MODERN SPECIES	164	Ifi30 (ENSMOCG00000001163) #7	Mpv17l2 (ENSMOCG00000009680) #8	Rab3a (ENSMOCG00000016750) #9	Pde4c (ENSMOCG00000015883) #10	Gm3336 (ENSMOCG00000017470) #11	Iqcn (ENSMOCG00000009272) #12	Jund (ENSMOCG00000005294) #13	Lsm4 (ENSMOCG00000020861) #14	Pgpep1 (ENSMOCG00000019971) #15	Gdf15 (ENSMOCG00000000065) #16	Lrrc25 (ENSMOCG00000000947) #17	Ssbp4 (ENSMOCG00000019818) #18	ENSMOCG00000013794 #19	Ell (ENSMOCG00000013489) #20	Fkbp8 (ENSMOCG00000015712) #21	Uba52 (ENSMOCG00000015677) #22	Rex1bd (ENSMOCG00000014306) #23	Crlf1 (ENSMOCG00000007746) #24	Tmem59l (ENSMOCG00000010649) #25	Klhl26 (ENSMOCG00000017635) #26	Crtc1 (ENSMOCG00000005553) #27	Comp (ENSMOCG00000004567) #28	Upf1 (ENSMOCG00000005699) #29	ENSMOCG00000000275 #30	ENSMOCG00000004861 #31	Cope (ENSMOCG00000014940) #32	Ddx49 (ENSMOCG00000018690) #33	Homer3 (ENSMOCG00000013590) #34	Sugp2 (ENSMOCG00000009704) #35	Armc6 (ENSMOCG00000014288) #36	Slc25a42 (ENSMOCG00000012570) #37
Cricetinae	ANCESTRAL SPECIES	36	ENSGT00390000010450 #7	ENSGT00940000160620 #8	ENSGT00940000158959.b #9	ENSGT00940000162285 #10	ENSGT01030000234883 #11	ENSGT00940000156018.A #12	ENSGT00940000162806 #13	ENSGT00610000086173 #14	ENSGT00390000015368.a.a #15	ENSGT00940000161872 #16	ENSGT00390000004001 #17	ENSGT00950000183049.C #18	ENSGT00390000018395 #19	ENSGT00940000155914 #20	ENSGT00940000156705 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926 #30	ENSGT01030000234515.b #31	ENSGT00390000003478 #32	ENSGT00730000111231 #33	ENSGT00940000158081 #34	ENSGT00410000025695.b #35	ENSGT00390000002913 #36	ENSGT00940000158163 #37
Golden Hamster	MODERN SPECIES	831	Ifi30 (ENSMAUG00000016704) #7	Mpv17l2 (ENSMAUG00000001144) #8	Rab3a (ENSMAUG00000005339) #9	Pde4c (ENSMAUG00000016880) #10	Gm3336 (ENSMAUG00000001502) #11	Iqcn (ENSMAUG00000021279) #12	Jund (ENSMAUG00000019892) #13	ENSMAUG00000018936	Pgpep1 (ENSMAUG00000020690) #15	Gdf15 (ENSMAUG00000014895) #16	Lrrc25 (ENSMAUG00000018197) #17	Ssbp4 (ENSMAUG00000011895) #18	Isyna1 (ENSMAUG00000021573) #19	Ell (ENSMAUG00000014805) #20	Fkbp8 (ENSMAUG00000010945) #21	Uba52 (ENSMAUG00000002775) #22	Rex1bd (ENSMAUG00000015830) #23	Crlf1 (ENSMAUG00000021052) #24	Tmem59l (ENSMAUG00000006146) #25	Klhl26 (ENSMAUG00000021352) #26	Crtc1 (ENSMAUG00000019225) #27	Comp (ENSMAUG00000010602) #28	Upf1 (ENSMAUG00000011398) #29	ENSMAUG00000012872 #30	ENSMAUG00000011350 #31	Cope (ENSMAUG00000016322) #32	Ddx49 (ENSMAUG00000010235) #33	Homer3 (ENSMAUG00000014150) #34	Sugp2 (ENSMAUG00000011371) #35	Armc6 (ENSMAUG00000011324) #36	Slc25a42 (ENSMAUG00000018082) #37
Chinese hamster chok1gshd	MODERN SPECIES	184	Ifi30 (ENSCGRG00001020539) #7	Mpv17l2 (ENSCGRG00001017497) #8	Rab3a (ENSCGRG00001021376) #9	Pde4c (ENSCGRG00001018842) #10	Gm3336 (ENSCGRG00001023238) #11	Iqcn (ENSCGRG00001004411) #12	Jund (ENSCGRG00001010573) #13	Lsm4 (ENSCGRG00001014436) #14	Pgpep1 (ENSCGRG00001016516) #15	Gdf15 (ENSCGRG00001016811) #16	Lrrc25 (ENSCGRG00001015091) #17	Ssbp4 (ENSCGRG00001016735) #18	Isyna1 (ENSCGRG00001022885) #19	Ell (ENSCGRG00001009009) #20	Fkbp8 (ENSCGRG00001012652) #21	Uba52 (ENSCGRG00001018293) #22	Rex1bd (ENSCGRG00001023832) #23	Crlf1 (ENSCGRG00001017905) #24	Tmem59l (ENSCGRG00001018799) #25	Klhl26 (ENSCGRG00001020014) #26	Crtc1 (ENSCGRG00001002202) #27	Comp (ENSCGRG00001009171) #28	Upf1 (ENSCGRG00001021067) #29	ENSCGRG00001006921 #30	ENSCGRG00001019774 #31	COPE (ENSCGRG00001024248) #32	Ddx49 (ENSCGRG00001009467) #33	Homer3 (ENSCGRG00001014952) #34	Sugp2 (ENSCGRG00001018264) #35	Armc6 (ENSCGRG00001019296) #36	Slc25a42 (ENSCGRG00001022045) #37
Murinae	ANCESTRAL SPECIES	23	ENSGT00940000160620 #8	ENSGT00940000158959.b #9	ENSGT00940000162285 #10	ENSGT01030000234883 #11	ENSGT00940000156018.A #12	ENSGT00940000162806 #13	ENSGT00610000086173 #14	ENSGT00390000015368.a.a #15	ENSGT00940000161872 #16	ENSGT00390000004001 #17	ENSGT00950000183049.C #18	ENSGT00390000018395 #19	ENSGT00940000155914 #20	ENSGT00940000156705 #21	ENSGT00530000064192	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926 #30	ENSGT01030000234515.b #31	ENSGT00390000003478 #32	ENSGT00730000111231 #33	ENSGT00940000158081 #34	ENSGT00410000025695.b #35	ENSGT00390000002913 #36	ENSGT00940000158163 #37
Rat	MODERN SPECIES	7	Mpv17l2 (ENSRNOG00000019394) #8	Rab3a (ENSRNOG00000019433) #9	Pde4c (ENSRNOG00000019518) #10	LOC120093089 (ENSRNOG00000043249) #11	Iqcn (ENSRNOG00000068146) #12	Jund (ENSRNOG00000019568) #13	Lsm4 (ENSRNOG00000019572) #14	Pgpep1 (ENSRNOG00000019639) #15	Mk1 (ENSRNOG00000019657)	Gdf15 (ENSRNOG00000019661) #16	Lrrc25 (ENSRNOG00000022565) #17	Ssbp4 (ENSRNOG00000019698) #18	Isyna1 (ENSRNOG00000019741) #19	Ell (ENSRNOG00000019824) #20	Fkbp8 (ENSRNOG00000058359) #21	Uba52 (ENSRNOG00000019971) #22	Rex1bd (ENSRNOG00000019990) #23	Crlf1 (ENSRNOG00000020030) #24	Tmem59l (ENSRNOG00000022432) #25	Klhl26 (ENSRNOG00000020088) #26	Crtc1 (ENSRNOG00000022421) #27	Comp (ENSRNOG00000048472) #28	Upf1 (ENSRNOG00000020134) #29	Gdf1 (ENSRNOG00000070518) #30	Cers1 (ENSRNOG00000067124) #31	Cope (ENSRNOG00000020178) #32	Ddx49 (ENSRNOG00000022368) #33	Homer3 (ENSRNOG00000020229) #34	Sugp2 (ENSRNOG00000020269) #35	Armc6 (ENSRNOG00000020280) #36	Slc25a42 (ENSRNOG00000020345) #37
Mus	ANCESTRAL SPECIES	6	ENSGT00940000160620 #8	ENSGT00940000158959.b #9	ENSGT00940000162285 #10	ENSGT01030000234883 #11	ENSGT00940000156018.A #12	ENSGT00940000162806 #13	ENSGT00610000086173 #14	ENSGT00390000015368.a.a #15	ENSGT00940000161872 #16	ENSGT00390000004001 #17	ENSGT00950000183049.C #18	ENSGT00390000018395 #19	ENSGT00940000155914 #20	ENSGT00940000156705 #21	ENSGT00530000064192	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926 #30	ENSGT01030000234515.b #31	ENSGT00390000003478 #32	ENSGT00730000111231 #33	ENSGT00940000158081 #34	ENSGT00410000025695.b #35	ENSGT00390000002913 #36	ENSGT00940000158163 #37
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000160620 #8	ENSGT00940000158959.b #9	ENSGT00940000162285 #10	ENSGT01030000234883 #11	ENSGT00940000156018.A #12	ENSGT00940000162806 #13	ENSGT00610000086173 #14	ENSGT00390000015368.a.a #15	ENSGT00940000161872 #16	ENSGT00390000004001 #17	ENSGT00950000183049.C #18	ENSGT00390000018395 #19	ENSGT00940000155914 #20	ENSGT00940000156705 #21	ENSGT00530000064192	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926 #30	ENSGT01030000234515.b #31	ENSGT00390000003478 #32	ENSGT00730000111231 #33	ENSGT00940000158081 #34	ENSGT00410000025695.b #35	ENSGT00390000002913 #36	ENSGT00940000158163 #37
Ryukyu mouse	DUPLICATION
Ryukyu mouse	MODERN SPECIES	17	Mpv17l2 (MGP_CAROLIEiJ_G0031164) #8	Rab3a (MGP_CAROLIEiJ_G0031163) #9	Pde4c (MGP_CAROLIEiJ_G0031162) #10	Gm3336 (MGP_CAROLIEiJ_G0031161) #11	MGP_CAROLIEiJ_G0031160	Jund (MGP_CAROLIEiJ_G0031159) #13	Lsm4 (MGP_CAROLIEiJ_G0031158) #14	Pgpep1 (MGP_CAROLIEiJ_G0031157) #15	Gdf15 (MGP_CAROLIEiJ_G0031156) #16	Lrrc25 (MGP_CAROLIEiJ_G0031155) #17	Ssbp4 (MGP_CAROLIEiJ_G0031154) #18	Isyna1 (MGP_CAROLIEiJ_G0031153) #19	Ell (MGP_CAROLIEiJ_G0031152) #20	Fkbp8 (MGP_CAROLIEiJ_G0031151) #21	MGP_CAROLIEiJ_G0031150 #22	MGP_CAROLIEiJ_G0031149 #22	Rex1bd (MGP_CAROLIEiJ_G0031148) #23	Crlf1 (MGP_CAROLIEiJ_G0031147) #24	Tmem59l (MGP_CAROLIEiJ_G0031146) #25	Klhl26 (MGP_CAROLIEiJ_G0031145) #26	Crtc1 (MGP_CAROLIEiJ_G0031144) #27	Comp (MGP_CAROLIEiJ_G0031143) #28	Upf1 (MGP_CAROLIEiJ_G0031142) #29	MGP_CAROLIEiJ_G0031141 #30	Cope (MGP_CAROLIEiJ_G0031140) #32	Ddx49 (MGP_CAROLIEiJ_G0031139) #33	Homer3 (MGP_CAROLIEiJ_G0031138) #34	Sugp2 (MGP_CAROLIEiJ_G0031137) #35	Armc6 (MGP_CAROLIEiJ_G0031136) #36	Slc25a42 (MGP_CAROLIEiJ_G0031135) #37	Tmem161a (MGP_CAROLIEiJ_G0031134)
Ryukyu mouse	DUPLICATION
Ryukyu mouse	MODERN SPECIES	16	Fam53b (MGP_CAROLIEiJ_G0030580)	Eef1akmt2 (MGP_CAROLIEiJ_G0030581)	Abraxas2 (MGP_CAROLIEiJ_G0030582)	Zranb1 (MGP_CAROLIEiJ_G0030583)	Ctbp2 (MGP_CAROLIEiJ_G0030584)	Tex36 (MGP_CAROLIEiJ_G0030585)	Edrf1 (MGP_CAROLIEiJ_G0030586)	Mmp21 (MGP_CAROLIEiJ_G0030587)	Uros (MGP_CAROLIEiJ_G0030588)	Bccip (MGP_CAROLIEiJ_G0030589)	Dhx32 (MGP_CAROLIEiJ_G0030590)	Fank1 (MGP_CAROLIEiJ_G0030591)	Adam12 (MGP_CAROLIEiJ_G0030592)	D7Ertd443e (MGP_CAROLIEiJ_G0030593)	MGP_CAROLIEiJ_G0030594 #22	MGP_CAROLIEiJ_G0030595 #22	Dock1 (MGP_CAROLIEiJ_G0030596)	Insyn2a (MGP_CAROLIEiJ_G0030597)	Nps (MGP_CAROLIEiJ_G0030598)	MGP_CAROLIEiJ_G0030599	Foxi2 (MGP_CAROLIEiJ_G0030600)	Clrn3 (MGP_CAROLIEiJ_G0030601)	Ptpre (MGP_CAROLIEiJ_G0030602)	MGP_CAROLIEiJ_G0030603	Mgmt (MGP_CAROLIEiJ_G0030604)	Ebf3 (MGP_CAROLIEiJ_G0030605)	MGP_CAROLIEiJ_G0030606	Glrx3 (MGP_CAROLIEiJ_G0030607)	Tcerg1l (MGP_CAROLIEiJ_G0030608)	Mapk1ip1 (MGP_CAROLIEiJ_G0030609)	Ppp2r2d (MGP_CAROLIEiJ_G0030610)
Ryukyu mouse	MODERN SPECIES	16	Lhpp (MGP_CAROLIEiJ_G0030579)	Fam53b (MGP_CAROLIEiJ_G0030580)	Eef1akmt2 (MGP_CAROLIEiJ_G0030581)	Abraxas2 (MGP_CAROLIEiJ_G0030582)	Zranb1 (MGP_CAROLIEiJ_G0030583)	Ctbp2 (MGP_CAROLIEiJ_G0030584)	Tex36 (MGP_CAROLIEiJ_G0030585)	Edrf1 (MGP_CAROLIEiJ_G0030586)	Mmp21 (MGP_CAROLIEiJ_G0030587)	Uros (MGP_CAROLIEiJ_G0030588)	Bccip (MGP_CAROLIEiJ_G0030589)	Dhx32 (MGP_CAROLIEiJ_G0030590)	Fank1 (MGP_CAROLIEiJ_G0030591)	Adam12 (MGP_CAROLIEiJ_G0030592)	D7Ertd443e (MGP_CAROLIEiJ_G0030593)	MGP_CAROLIEiJ_G0030594 #22	MGP_CAROLIEiJ_G0030595 #22	Dock1 (MGP_CAROLIEiJ_G0030596)	Insyn2a (MGP_CAROLIEiJ_G0030597)	Nps (MGP_CAROLIEiJ_G0030598)	MGP_CAROLIEiJ_G0030599	Foxi2 (MGP_CAROLIEiJ_G0030600)	Clrn3 (MGP_CAROLIEiJ_G0030601)	Ptpre (MGP_CAROLIEiJ_G0030602)	MGP_CAROLIEiJ_G0030603	Mgmt (MGP_CAROLIEiJ_G0030604)	Ebf3 (MGP_CAROLIEiJ_G0030605)	MGP_CAROLIEiJ_G0030606	Glrx3 (MGP_CAROLIEiJ_G0030607)	Tcerg1l (MGP_CAROLIEiJ_G0030608)	Mapk1ip1 (MGP_CAROLIEiJ_G0030609)
Ryukyu mouse	MODERN SPECIES	17	Ifi30 (MGP_CAROLIEiJ_G0031165) #7	Mpv17l2 (MGP_CAROLIEiJ_G0031164) #8	Rab3a (MGP_CAROLIEiJ_G0031163) #9	Pde4c (MGP_CAROLIEiJ_G0031162) #10	Gm3336 (MGP_CAROLIEiJ_G0031161) #11	MGP_CAROLIEiJ_G0031160	Jund (MGP_CAROLIEiJ_G0031159) #13	Lsm4 (MGP_CAROLIEiJ_G0031158) #14	Pgpep1 (MGP_CAROLIEiJ_G0031157) #15	Gdf15 (MGP_CAROLIEiJ_G0031156) #16	Lrrc25 (MGP_CAROLIEiJ_G0031155) #17	Ssbp4 (MGP_CAROLIEiJ_G0031154) #18	Isyna1 (MGP_CAROLIEiJ_G0031153) #19	Ell (MGP_CAROLIEiJ_G0031152) #20	Fkbp8 (MGP_CAROLIEiJ_G0031151) #21	MGP_CAROLIEiJ_G0031150 #22	MGP_CAROLIEiJ_G0031149 #22	Rex1bd (MGP_CAROLIEiJ_G0031148) #23	Crlf1 (MGP_CAROLIEiJ_G0031147) #24	Tmem59l (MGP_CAROLIEiJ_G0031146) #25	Klhl26 (MGP_CAROLIEiJ_G0031145) #26	Crtc1 (MGP_CAROLIEiJ_G0031144) #27	Comp (MGP_CAROLIEiJ_G0031143) #28	Upf1 (MGP_CAROLIEiJ_G0031142) #29	MGP_CAROLIEiJ_G0031141 #30	Cope (MGP_CAROLIEiJ_G0031140) #32	Ddx49 (MGP_CAROLIEiJ_G0031139) #33	Homer3 (MGP_CAROLIEiJ_G0031138) #34	Sugp2 (MGP_CAROLIEiJ_G0031137) #35	Armc6 (MGP_CAROLIEiJ_G0031136) #36	Slc25a42 (MGP_CAROLIEiJ_G0031135) #37
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000160620 #8	ENSGT00940000158959.b #9	ENSGT00940000162285 #10	ENSGT01030000234883 #11	ENSGT00940000156018.A #12	ENSGT00940000162806 #13	ENSGT00610000086173 #14	ENSGT00390000015368.a.a #15	ENSGT00940000161872 #16	ENSGT00390000004001 #17	ENSGT00950000183049.C #18	ENSGT00390000018395 #19	ENSGT00940000155914 #20	ENSGT00940000156705 #21	ENSGT00530000064192	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926 #30	ENSGT01030000234515.b #31	ENSGT00390000003478 #32	ENSGT00730000111231 #33	ENSGT00940000158081 #34	ENSGT00410000025695.b #35	ENSGT00390000002913 #36	ENSGT00940000158163 #37
Mouse	MODERN SPECIES	17	Mpv17l2 (ENSMUSG00000035559) #8	Rab3a (ENSMUSG00000031840) #9	Pde4c (ENSMUSG00000031842) #10	Gm3336 (ENSMUSG00000095026) #11	Iqcn (ENSMUSG00000110622) #12	Jund (ENSMUSG00000071076) #13	Lsm4 (ENSMUSG00000031848) #14	Pgpep1 (ENSMUSG00000056204) #15	Gdf15 (ENSMUSG00000038508) #16	Lrrc25 (ENSMUSG00000049988) #17	Ssbp4 (ENSMUSG00000070003) #18	Isyna1 (ENSMUSG00000019139) #19	Ell (ENSMUSG00000070002) #20	Fkbp8 (ENSMUSG00000019428) #21	Kxd1 (ENSMUSG00000055553) ##22	Uba52 (ENSMUSG00000090137) #22	Rex1bd (ENSMUSG00000058833) #23	Crlf1 (ENSMUSG00000007888) #24	Tmem59l (ENSMUSG00000035964) #25	Klhl26 (ENSMUSG00000055707) #26	Crtc1 (ENSMUSG00000003575) #27	Comp (ENSMUSG00000031849) #28	Upf1 (ENSMUSG00000058301) #29	Gdf1 (ENSMUSG00000109523) #30	Cers1 (ENSMUSG00000087408) #30	Cope (ENSMUSG00000055681) #32	Ddx49 (ENSMUSG00000057788) #33	Homer3 (ENSMUSG00000003573) #34	Sugp2 (ENSMUSG00000036054) #35	Armc6 (ENSMUSG00000002343) #36	Slc25a42 (ENSMUSG00000002346) #37
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000158959.b #9	ENSGT00940000162285 #10	ENSGT01030000234883 #11	ENSGT00940000156018.A #12	ENSGT00680000100785	ENSGT00940000162806 #13	ENSGT00610000086173 #14	ENSGT00390000015368.a.a #15	ENSGT00940000161872 #16	ENSGT00390000004001 #17	ENSGT00950000183049.C #18	ENSGT00390000018395 #19	ENSGT00940000155914 #20	ENSGT00940000156705 #21	ENSGT00530000064192	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926 #30	ENSGT01030000234515.b #31	ENSGT00390000003478 #32	ENSGT00730000111231 #33	ENSGT00940000158081 #34	ENSGT00410000025695.b #35	ENSGT00390000002913 #36	ENSGT00940000158163 #37
Steppe mouse	MODERN SPECIES	2845	Ccdc157 (ENSMSIG00000002493)	Rnf215 (ENSMSIG00000002532)	ENSMSIG00000002570	Sec14l2 (ENSMSIG00000002585)	Mtfp1 (ENSMSIG00000002619)	ENSMSIG00000002649	Sec14l4 (ENSMSIG00000002672)	Gal3st1 (ENSMSIG00000002697)	Pes1 (ENSMSIG00000002758)	4930556J24Rik (ENSMSIG00000002859)	ENSMSIG00000002894	Tcn2 (ENSMSIG00000002908)	Slc35e4 (ENSMSIG00000002976)	Dusp18 (ENSMSIG00000002994)	ENSMSIG00000003003	ENSMSIG00000003026 #22	Osbp2 (ENSMSIG00000003063)	Morc2a (ENSMSIG00000003158)	ENSMSIG00000003275	ENSMSIG00000003292	Smtn (ENSMSIG00000003334)	Selenom (ENSMSIG00000003733)	Inpp5j (ENSMSIG00000003757)	Pla2g3 (ENSMSIG00000003865)	ENSMSIG00000003911	Rnf185 (ENSMSIG00000003936)	Limk2 (ENSMSIG00000004000)	Pik3ip1 (ENSMSIG00000004277)	Patz1 (ENSMSIG00000004323)	Drg1 (ENSMSIG00000004401)
spretus	DUPLICATION
spretus	MODERN SPECIES	17	Ifi30 (MGP_SPRETEiJ_G0032283) #7	Mpv17l2 (MGP_SPRETEiJ_G0032282) #8	Rab3a (MGP_SPRETEiJ_G0032281) #9	Pde4c (MGP_SPRETEiJ_G0032280) #10	Gm3336 (MGP_SPRETEiJ_G0032279) #11	MGP_SPRETEiJ_G0032278	Jund (MGP_SPRETEiJ_G0032277) #13	Lsm4 (MGP_SPRETEiJ_G0032276) #14	Pgpep1 (MGP_SPRETEiJ_G0032275) #15	Gdf15 (MGP_SPRETEiJ_G0032274) #16	Lrrc25 (MGP_SPRETEiJ_G0032273) #17	Ssbp4 (MGP_SPRETEiJ_G0032272) #18	Isyna1 (MGP_SPRETEiJ_G0032271) #19	Ell (MGP_SPRETEiJ_G0032270) #20	Fkbp8 (MGP_SPRETEiJ_G0032269) #21	MGP_SPRETEiJ_G0032268 #22	MGP_SPRETEiJ_G0032267 #22	Rex1bd (MGP_SPRETEiJ_G0032266) #23	Crlf1 (MGP_SPRETEiJ_G0032265) #24	Tmem59l (MGP_SPRETEiJ_G0032264) #25	Klhl26 (MGP_SPRETEiJ_G0032263) #26	Crtc1 (MGP_SPRETEiJ_G0032262) #27	Comp (MGP_SPRETEiJ_G0032261) #28	Upf1 (MGP_SPRETEiJ_G0032260) #29	MGP_SPRETEiJ_G0032259 #30	Cope (MGP_SPRETEiJ_G0032258) #32	Ddx49 (MGP_SPRETEiJ_G0032257) #33	Homer3 (MGP_SPRETEiJ_G0032256) #34	Sugp2 (MGP_SPRETEiJ_G0032255) #35	Armc6 (MGP_SPRETEiJ_G0032254) #36	Slc25a42 (MGP_SPRETEiJ_G0032253) #37
spretus	MODERN SPECIES	17	Mpv17l2 (MGP_SPRETEiJ_G0032282) #8	Rab3a (MGP_SPRETEiJ_G0032281) #9	Pde4c (MGP_SPRETEiJ_G0032280) #10	Gm3336 (MGP_SPRETEiJ_G0032279) #11	MGP_SPRETEiJ_G0032278	Jund (MGP_SPRETEiJ_G0032277) #13	Lsm4 (MGP_SPRETEiJ_G0032276) #14	Pgpep1 (MGP_SPRETEiJ_G0032275) #15	Gdf15 (MGP_SPRETEiJ_G0032274) #16	Lrrc25 (MGP_SPRETEiJ_G0032273) #17	Ssbp4 (MGP_SPRETEiJ_G0032272) #18	Isyna1 (MGP_SPRETEiJ_G0032271) #19	Ell (MGP_SPRETEiJ_G0032270) #20	Fkbp8 (MGP_SPRETEiJ_G0032269) #21	MGP_SPRETEiJ_G0032268 #22	MGP_SPRETEiJ_G0032267 #22	Rex1bd (MGP_SPRETEiJ_G0032266) #23	Crlf1 (MGP_SPRETEiJ_G0032265) #24	Tmem59l (MGP_SPRETEiJ_G0032264) #25	Klhl26 (MGP_SPRETEiJ_G0032263) #26	Crtc1 (MGP_SPRETEiJ_G0032262) #27	Comp (MGP_SPRETEiJ_G0032261) #28	Upf1 (MGP_SPRETEiJ_G0032260) #29	MGP_SPRETEiJ_G0032259 #30	Cope (MGP_SPRETEiJ_G0032258) #32	Ddx49 (MGP_SPRETEiJ_G0032257) #33	Homer3 (MGP_SPRETEiJ_G0032256) #34	Sugp2 (MGP_SPRETEiJ_G0032255) #35	Armc6 (MGP_SPRETEiJ_G0032254) #36	Slc25a42 (MGP_SPRETEiJ_G0032253) #37	Tmem161a (MGP_SPRETEiJ_G0032252)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1870	Ifi30 (ENSNGAG00000022275) #7	Mpv17l2 (ENSNGAG00000012070) #8	Rab3a (ENSNGAG00000020872) #9	Pde4c (ENSNGAG00000004214) #10	ENSNGAG00000014618 #11	Iqcn (ENSNGAG00000014525) #12	Jund (ENSNGAG00000010099) #13	Lsm4 (ENSNGAG00000008644) #14	Pgpep1 (ENSNGAG00000022241) #15	Gdf15 (ENSNGAG00000019410) #16	Lrrc25 (ENSNGAG00000018288) #17	Ssbp4 (ENSNGAG00000023633) #18	Isyna1 (ENSNGAG00000013546) #19	Ell (ENSNGAG00000004302) #20	Fkbp8 (ENSNGAG00000001505) #21	Uba52 (ENSNGAG00000010884) #22	Rex1bd (ENSNGAG00000013627) #23	Crlf1 (ENSNGAG00000022169) #24	Tmem59l (ENSNGAG00000020797) #25	Klhl26 (ENSNGAG00000010743) #26	Crtc1 (ENSNGAG00000021475) #27	Comp (ENSNGAG00000024332) #28	Upf1 (ENSNGAG00000024107) #29	ENSNGAG00000022538 #30	ENSNGAG00000022292 #31	Cope (ENSNGAG00000022394) #32	Ddx49 (ENSNGAG00000019673) #33	Homer3 (ENSNGAG00000015803) #34	Sugp2 (ENSNGAG00000005936) #35	Armc6 (ENSNGAG00000021205) #36	Slc25a42 (ENSNGAG00000023980) #37