Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35
Artiodactyla	ANCESTRAL SPECIES	22	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35
Suina	ANCESTRAL SPECIES	39	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35
Pig	MODERN SPECIES	10	MPV17L2 (ENSSSCG00000013896) #7	RAB3A (ENSSSCG00000013897) #8	PDE4C (ENSSSCG00000036363) #9	ENSSSCG00000013902 #10	ENSSSCG00000053451 #11	LSM4 (ENSSSCG00000034314) #12	PGPEP1 (ENSSSCG00000039684) #13	GDF15 (ENSSSCG00000034260) #14	LRRC25 (ENSSSCG00000036963) #15	SSBP4 (ENSSSCG00000025955) #16	ISYNA1 (ENSSSCG00000040524) #17	ENSSSCG00000043019 #18	ELL (ENSSSCG00000040181) #19	FKBP8 (ENSSSCG00000013905) #20	KXD1 (ENSSSCG00000013906) #21	UBA52 (ENSSSCG00000053292) #22	REX1BD (ENSSSCG00000040666) #23	CRLF1 (ENSSSCG00000013909) #24	TMEM59L (ENSSSCG00000013911) #25	KLHL26 (ENSSSCG00000013913) #26	CRTC1 (ENSSSCG00000013915) #27	COMP (ENSSSCG00000013916) #28	UPF1 (ENSSSCG00000039301) #29	CERS1 (ENSSSCG00000013928) #30	COPE (ENSSSCG00000027840) #31	DDX49 (ENSSSCG00000025329) #32	HOMER3 (ENSSSCG00000013919) #33	SUGP2 (ENSSSCG00000025839) #34	ARMC6 (ENSSSCG00000049430) #35	ENSSSCG00000044637 #36	SLC25A42 (ENSSSCG00000013927) #37
Chacoan peccary	MODERN SPECIES	769	IFI30 (ENSCWAG00000017658)	MPV17L2 (ENSCWAG00000017714) #7	RAB3A (ENSCWAG00000017742) #8	PDE4C (ENSCWAG00000017847) #9	ENSCWAG00000018273 #11	JUND (ENSCWAG00000018303)	LSM4 (ENSCWAG00000018311) #12	PGPEP1 (ENSCWAG00000018354) #13	GDF15 (ENSCWAG00000018499) #14	LRRC25 (ENSCWAG00000018518) #15	SSBP4 (ENSCWAG00000018544) #16	ISYNA1 (ENSCWAG00000018620) #17	ELL (ENSCWAG00000018746) #19	FKBP8 (ENSCWAG00000018780) #20	KXD1 (ENSCWAG00000018851) #21	UBA52 (ENSCWAG00000018816) #22	REX1BD (ENSCWAG00000018868) #23	ENSCWAG00000018899	CRLF1 (ENSCWAG00000018917) #24	TMEM59L (ENSCWAG00000018953) #25	KLHL26 (ENSCWAG00000018976) #26	CRTC1 (ENSCWAG00000019030) #27	COMP (ENSCWAG00000019235) #28	UPF1 (ENSCWAG00000019458) #29	GDF1 (ENSCWAG00000019490)	CERS1 (ENSCWAG00000019515) #30	COPE (ENSCWAG00000019578) #31	DDX49 (ENSCWAG00000019644) #32	HOMER3 (ENSCWAG00000019671) #33	SUGP2 (ENSCWAG00000019735) #34	ARMC6 (ENSCWAG00000019757) #35
Artiodactyla_a	ANCESTRAL SPECIES	23	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35
Camelidae	ANCESTRAL SPECIES	64	ENSGT00390000010450	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192.q #21	ENSGT00940000153593.c.a #22	ENSGT00530000064192.r #21	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Arabian camel	MODERN SPECIES	14	IFI30 (ENSCDRG00005011860)	MPV17L2 (ENSCDRG00005011813) #7	RAB3A (ENSCDRG00005011718) #8	PDE4C (ENSCDRG00005011492) #9	ENSCDRG00005011454 #10	ENSCDRG00005011380 #11	LSM4 (ENSCDRG00005011254) #12	PGPEP1 (ENSCDRG00005011120) #13	GDF15 (ENSCDRG00005011075) #14	LRRC25 (ENSCDRG00005011039) #15	ISYNA1 (ENSCDRG00005010835) #17	SSBP4 (ENSCDRG00005010596) #16	ELL (ENSCDRG00005010516) #19	FKBP8 (ENSCDRG00005010447) #20	ENSCDRG00005010351 #21	UBA52 (ENSCDRG00005010272) #22	REX1BD (ENSCDRG00005010167) #23	CRLF1 (ENSCDRG00005010053) #24	TMEM59L (ENSCDRG00005009996) #25	KLHL26 (ENSCDRG00005009944) #26	CRTC1 (ENSCDRG00005009334) #27	COMP (ENSCDRG00005009080) #28	UPF1 (ENSCDRG00005008931) #29	CERS1 (ENSCDRG00005013600) #30	COPE (ENSCDRG00005013441) #31	DDX49 (ENSCDRG00005013373) #32	HOMER3 (ENSCDRG00005013258) #33	SUGP2 (ENSCDRG00005013031) #34	ARMC6 (ENSCDRG00005012979) #35	SLC25A42 (ENSCDRG00005012927) #37	TMEM161A (ENSCDRG00005012779)
Artiodactyla_b	ANCESTRAL SPECIES	23	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00940000166941	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35
Blue whale	MODERN SPECIES	14	RAB3A (ENSBMSG00010004711) #8	PDE4C (ENSBMSG00010004659) #9	ENSBMSG00010004630 #10	ENSBMSG00010004618 #11	JUND (ENSBMSG00010004609)	LSM4 (ENSBMSG00010004583) #12	PGPEP1 (ENSBMSG00010004554) #13	ENSBMSG00010004531	GDF15 (ENSBMSG00010004519) #14	LRRC25 (ENSBMSG00010004508) #15	SSBP4 (ENSBMSG00010004477) #16	ISYNA1 (ENSBMSG00010004428) #17	ELL (ENSBMSG00010004392) #19	FKBP8 (ENSBMSG00010004359) #20	KXD1 (ENSBMSG00010004344) #21	UBA52 (ENSBMSG00010004333) #22	REX1BD (ENSBMSG00010004317) #23	CRLF1 (ENSBMSG00010004297) #24	TMEM59L (ENSBMSG00010004290) #25	KLHL26 (ENSBMSG00010004285) #26	CRTC1 (ENSBMSG00010004257) #27	COMP (ENSBMSG00010004199) #28	UPF1 (ENSBMSG00010004141) #29	GDF1 (ENSBMSG00010004120)	CERS1 (ENSBMSG00010004105) #30	COPE (ENSBMSG00010004064) #31	DDX49 (ENSBMSG00010004039) #32	HOMER3 (ENSBMSG00010003958) #33	SUGP2 (ENSBMSG00010003931) #34	ARMC6 (ENSBMSG00010003914) #35	SLC25A42 (ENSBMSG00010003900) #37
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173.a.a #12	ENSGT00610000086173.b #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35
Sperm whale	MODERN SPECIES	379															KXD1 (ENSPCTG00005009741) #21	UBA52 (ENSPCTG00005009698) #22	REX1BD (ENSPCTG00005009583) #23	CRLF1 (ENSPCTG00005009544) #24	TMEM59L (ENSPCTG00005009441) #25
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173.a.a #12	ENSGT00610000086173.b #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000162285 #9	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173.b #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.b ##22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000153593.c.a #22	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37	ENSGT00390000000672.a.a
Vaquita	MODERN SPECIES	14	RAB3A (ENSPSNG00000003382) #8	PDE4C (ENSPSNG00000003220) #9	ENSPSNG00000003167 #11	JUND (ENSPSNG00000003153)	ENSPSNG00000003131 #12	PGPEP1 (ENSPSNG00000003067) #13	GDF15 (ENSPSNG00000003041) #14	LRRC25 (ENSPSNG00000003029) #15	SSBP4 (ENSPSNG00000002994) #16	ISYNA1 (ENSPSNG00000002918) #17	ELL (ENSPSNG00000002839) #19	FKBP8 (ENSPSNG00000002784) #20	KXD1 (ENSPSNG00000002749) #21	ENSPSNG00000002729	REX1BD (ENSPSNG00000002705) #23	UBA52 (ENSPSNG00000002675) #22	CRLF1 (ENSPSNG00000002653) #24	TMEM59L (ENSPSNG00000002614) #25	KLHL26 (ENSPSNG00000002575) #26	CRTC1 (ENSPSNG00000002462) #27	COMP (ENSPSNG00000002298) #28	UPF1 (ENSPSNG00000002213) #29	GDF1 (ENSPSNG00000002175)	CERS1 (ENSPSNG00000002156) #30	COPE (ENSPSNG00000002124) #31	DDX49 (ENSPSNG00000002062) #32	HOMER3 (ENSPSNG00000002016) #33	SUGP2 (ENSPSNG00000001966) #34	ARMC6 (ENSPSNG00000001939) #35	SLC25A42 (ENSPSNG00000001921) #37	TMEM161A (ENSPSNG00000001898)
Dolphin	MODERN SPECIES	3273													ELL (ENSTTRG00000010436) #19	FKBP8 (ENSTTRG00000010470) #20	KXD1 (ENSTTRG00000010477) #21	UBA52 (ENSTTRG00000021461) #22	ENSTTRG00000010481 #23	CRLF1 (ENSTTRG00000010484) #24	TMEM59L (ENSTTRG00000010492) #25	KLHL26 (ENSTTRG00000010497) #26	CRTC1 (ENSTTRG00000010501) #27	COMP (ENSTTRG00000010509) #28
Pecora	ANCESTRAL SPECIES		ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Yarkand deer	MODERN SPECIES	32	IFI30 (ENSCHYG00000019975)	MPV17L2 (ENSCHYG00000019897) #7	RAB3A (ENSCHYG00000019752) #8	PDE4C (ENSCHYG00000019445) #9	ENSCHYG00000019351 #10	JUND (ENSCHYG00000019284)	LSM4 (ENSCHYG00000019053) #12	PGPEP1 (ENSCHYG00000018924) #13	GDF15 (ENSCHYG00000018886) #14	LRRC25 (ENSCHYG00000018842) #15	SSBP4 (ENSCHYG00000018441) #16	ISYNA1 (ENSCHYG00000018077) #17	ELL (ENSCHYG00000017915) #19	FKBP8 (ENSCHYG00000017721) #20	KXD1 (ENSCHYG00000017621) #21	UBA52 (ENSCHYG00000017560) #22	REX1BD (ENSCHYG00000017438) #23	CRLF1 (ENSCHYG00000017284) #24	TMEM59L (ENSCHYG00000017122) #25	KLHL26 (ENSCHYG00000017020) #26	CRTC1 (ENSCHYG00000016471) #27	COMP (ENSCHYG00000016040) #28	UPF1 (ENSCHYG00000015773) #29	GDF1 (ENSCHYG00000015658)	CERS1 (ENSCHYG00000015529) #30	DDX49 (ENSCHYG00000015448) #32	ENSCHYG00000014561 #33	SUGP2 (ENSCHYG00000014360) #34	ARMC6 (ENSCHYG00000014214) #35	SLC25A42 (ENSCHYG00000014137) #37	TMEM161A (ENSCHYG00000013806)
Percora_a	ANCESTRAL SPECIES		ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Bovidae	ANCESTRAL SPECIES		ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705.q.b #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Caprinae	ANCESTRAL SPECIES	32	ENSGT00390000010450	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705.q.b #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Rambouillet Sheep	MODERN SPECIES	21	IFI30 (ENSOARG00020005418)	MPV17L2 (ENSOARG00020005392) #7	RAB3A (ENSOARG00020005307) #8	PDE4C (ENSOARG00020004959) #9	ENSOARG00020004884 #11	JUND (ENSOARG00020004870)	LSM4 (ENSOARG00020004808) #12	PGPEP1 (ENSOARG00020004669) #13	GDF15 (ENSOARG00020004638) #14	LRRC25 (ENSOARG00020004617) #15	SSBP4 (ENSOARG00020004580) #16	ISYNA1 (ENSOARG00020004475) #17	ELL (ENSOARG00020004406) #19	FKBP8 (ENSOARG00020004369) #20	KXD1 (ENSOARG00020004349) #21	UBA52 (ENSOARG00020004308) #22	REX1BD (ENSOARG00020004269) #23	CRLF1 (ENSOARG00020004211) #24	TMEM59L (ENSOARG00020004177) #25	KLHL26 (ENSOARG00020004115) #26	CRTC1 (ENSOARG00020003966) #27	COMP (ENSOARG00020003569) #28	UPF1 (ENSOARG00020003352) #29	CERS1 (ENSOARG00020021615) #30	DDX49 (ENSOARG00020021548) #32	ENSOARG00020021129 #33	SUGP2 (ENSOARG00020021040) #34	ARMC6 (ENSOARG00020020947) #35	SLC25A42 (ENSOARG00020020909) #37	TMEM161A (ENSOARG00020020857)	MEF2B (ENSOARG00020020398)
Bovinae	ANCESTRAL SPECIES	34	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705.q.b #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Bos	ANCESTRAL SPECIES	34	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705.q.b #20	ENSGT00530000064192.s #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Bos_a	ANCESTRAL SPECIES	29	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT01100000263504.b.t	ENSGT00390000012138.b	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705.q.b #20	ENSGT00530000064192.s #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37	ENSGT00390000000672.a.a
Wild yak	MODERN SPECIES	984													ELL (ENSBMUG00000015621) #19	ENSBMUG00000015586 #20	KXD1 (ENSBMUG00000015517) #21	UBA52 (ENSBMUG00000015499) #22	REX1BD (ENSBMUG00000015467) #23	CRLF1 (ENSBMUG00000015427) #24	TMEM59L (ENSBMUG00000015381) #25	KLHL26 (ENSBMUG00000015350) #26	CRTC1 (ENSBMUG00000015292) #27	COMP (ENSBMUG00000015225) #28	UPF1 (ENSBMUG00000015177) #29	CERS1 (ENSBMUG00000015159) #30	COPE (ENSBMUG00000015145) #31	DDX49 (ENSBMUG00000015132) #32	HOMER3 (ENSBMUG00000015101) #33	SUGP2 (ENSBMUG00000015048) #34	ARMC6 (ENSBMUG00000015012) #35	SLC25A42 (ENSBMUG00000014988) #37	TMEM161A (ENSBMUG00000014965)
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Equus	ANCESTRAL SPECIES	23	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Donkey	MODERN SPECIES		RAB3A (ENSEASG00005006221) #8	PDE4C (ENSEASG00005006231) #9	ENSEASG00005028857 #10	ENSEASG00005038750	ENSEASG00005006233 #11	JUND (ENSEASG00005006235)	ENSEASG00005030773 #12	PGPEP1 (ENSEASG00005006237) #13	ENSEASG00005032985	LRRC25 (ENSEASG00005006241) #15	SSBP4 (ENSEASG00005006244) #16	ISYNA1 (ENSEASG00005006248) #17	ELL (ENSEASG00005006252) #19	FKBP8 (ENSEASG00005006254) #20	KXD1 (ENSEASG00005031599) #21	UBA52 (ENSEASG00005033556) #22	ENSEASG00005025213 #23	CRLF1 (ENSEASG00005006270) #24	TMEM59L (ENSEASG00005006274) #25	KLHL26 (ENSEASG00005006276) #26	CRTC1 (ENSEASG00005006280) #27	COMP (ENSEASG00005006320) #28	UPF1 (ENSEASG00005006549) #29	GDF1 (ENSEASG00005029430)	CERS1 (ENSEASG00005030456) #30	COPE (ENSEASG00005006557) #31	DDX49 (ENSEASG00005006560) #32	HOMER3 (ENSEASG00005006562) #33	SUGP2 (ENSEASG00005006565) #34	ARMC6 (ENSEASG00005006568) #35	SLC25A42 (ENSEASG00005006570) #37
Chiroptera	ANCESTRAL SPECIES	44	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Megabat	MODERN SPECIES	485										GDF15 (ENSPVAG00000009921) #14	SSBP4 (ENSPVAG00000009922) #16	ISYNA1 (ENSPVAG00000009923) #17	ELL (ENSPVAG00000009924) #19	FKBP8 (ENSPVAG00000009926) #20	KXD1 (ENSPVAG00000009927) #21	UBA52 (ENSPVAG00000024217) #22	ENSPVAG00000009928 #23	CRLF1 (ENSPVAG00000009929) #24	TMEM59L (ENSPVAG00000009930) #25	KLHL26 (ENSPVAG00000009931) #26
Microchiroptera	ANCESTRAL SPECIES	43	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1005	NADK2 (ENSMLUG00000002689)	RANBP3L (ENSMLUG00000002697)	NIPBL (ENSMLUG00000001724)	ENSMLUG00000011746	ENSMLUG00000029621	NUP155 (ENSMLUG00000014272)	WDR70 (ENSMLUG00000004998)	GDNF (ENSMLUG00000005002)	EGFLAM (ENSMLUG00000012866)	LIFR (ENSMLUG00000015027)	OSMR (ENSMLUG00000005743)	RICTOR (ENSMLUG00000005754)	FYB1 (ENSMLUG00000002937)	C9 (ENSMLUG00000005440)	DAB2 (ENSMLUG00000005444)	ENSMLUG00000027508 #22	ENSMLUG00000006820	ENSMLUG00000030031	ENSMLUG00000029265	PTGER4 (ENSMLUG00000010038)	TTC33 (ENSMLUG00000012023)	PRKAA1 (ENSMLUG00000014242)	RPL37 (ENSMLUG00000001565)	ENSMLUG00000007572	C7 (ENSMLUG00000007586)	MROH2B (ENSMLUG00000007613)	C6 (ENSMLUG00000016910)	PLCXD3 (ENSMLUG00000016916)	ENSMLUG00000009431	RIMOC1 (ENSMLUG00000007915)	FBXO4 (ENSMLUG00000014799)
Microbat	MODERN SPECIES	1248	IFI30 (ENSMLUG00000000931)	MPV17L2 (ENSMLUG00000024457) #7	PDE4C (ENSMLUG00000003985) #9	ENSMLUG00000003998 #11	LSM4 (ENSMLUG00000004010) #12	PGPEP1 (ENSMLUG00000002092) #13	ENSMLUG00000023172	GDF15 (ENSMLUG00000002100) #14	LRRC25 (ENSMLUG00000002102) #15	SSBP4 (ENSMLUG00000002107) #16	ISYNA1 (ENSMLUG00000002119) #17	ENSMLUG00000002123 #19	ENSMLUG00000023645 #19	FKBP8 (ENSMLUG00000002128) #20	KXD1 (ENSMLUG00000002143) #21	ENSMLUG00000029594 #22	REX1BD (ENSMLUG00000030218) #23	CRLF1 (ENSMLUG00000002437) #24	ENSMLUG00000028871	KLHL26 (ENSMLUG00000003470) #26	CRTC1 (ENSMLUG00000012234) #27	COMP (ENSMLUG00000012249) #28	UPF1 (ENSMLUG00000012122) #29	ENSMLUG00000012140	ENSMLUG00000026905 #30	COPE (ENSMLUG00000012147) #31	DDX49 (ENSMLUG00000012159) #32	HOMER3 (ENSMLUG00000012170) #33	ENSMLUG00000025755	SUGP2 (ENSMLUG00000012189) #34	ENSMLUG00000012203 #35
Carnivora	ANCESTRAL SPECIES	6	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35
Caniformia	ANCESTRAL SPECIES	4	ENSGT00390000010450	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Canidae	ANCESTRAL SPECIES		ENSGT00390000010450	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478.b #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Red fox	MODERN SPECIES	5	PIK3R2 (ENSVVUG00000008441)	IFI30 (ENSVVUG00000008281)	MPV17L2 (ENSVVUG00000008270) #7	RAB3A (ENSVVUG00000008188) #8	PDE4C (ENSVVUG00000008178) #9	ENSVVUG00000008151 #11	LSM4 (ENSVVUG00000008136) #12	PGPEP1 (ENSVVUG00000008129) #13	GDF15 (ENSVVUG00000008127) #14	LRRC25 (ENSVVUG00000008124) #15	ENSVVUG00000008114	SSBP4 (ENSVVUG00000008060) #16	ISYNA1 (ENSVVUG00000008037) #17	ELL (ENSVVUG00000008025) #19	FKBP8 (ENSVVUG00000008005) #20	UBA52 (ENSVVUG00000007989) #22	REX1BD (ENSVVUG00000007980) #23	CRLF1 (ENSVVUG00000007976) #24	TMEM59L (ENSVVUG00000007974) #25	KLHL26 (ENSVVUG00000007964) #26	CRTC1 (ENSVVUG00000007833) #27	ENSVVUG00000007818 #28	UPF1 (ENSVVUG00000007797) #29	CERS1 (ENSVVUG00000007783) #30	ENSVVUG00000007777 #31	DDX49 (ENSVVUG00000007767) #32	HOMER3 (ENSVVUG00000007758) #33	SUGP2 (ENSVVUG00000007744) #34	ARMC6 (ENSVVUG00000007731) #35	SLC25A42 (ENSVVUG00000007728) #37	TMEM161A (ENSVVUG00000007683)
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00950000183087.A.b.a.a	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478.b #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Dingo	MODERN SPECIES	313	C6 (ENSCAFG00020011760)	MROH2B (ENSCAFG00020012118)	C7 (ENSCAFG00020012179)	CARD6 (ENSCAFG00020012185)	ENSCAFG00020012191	ENSCAFG00020012194	PRKAA1 (ENSCAFG00020012199)	TTC33 (ENSCAFG00020012202)	PTGER4 (ENSCAFG00020012207)	ENSCAFG00020012213	DAB2 (ENSCAFG00020012220)	C9 (ENSCAFG00020012230)	FYB1 (ENSCAFG00020012241)	RICTOR (ENSCAFG00020012256)	OSMR (ENSCAFG00020012366)	ENSCAFG00020012396 #22	LIFR (ENSCAFG00020012405)	EGFLAM (ENSCAFG00020012614)	ENSCAFG00020012665	GDNF (ENSCAFG00020012672)	WDR70 (ENSCAFG00020012697)	NUP155 (ENSCAFG00020013105)	CPLANE1 (ENSCAFG00020014796)	NIPBL (ENSCAFG00020014920)	ENSCAFG00020016583	ENSCAFG00020016588	RANBP3L (ENSCAFG00020016590)	NADK2 (ENSCAFG00020016603)	SKP2 (ENSCAFG00020016656)	LMBRD2 (ENSCAFG00020016658)	ENSCAFG00020016659
Dog	MODERN SPECIES	12	IFI30 (ENSCAFG00845023402)	MPV17L2 (ENSCAFG00845023290) #7	RAB3A (ENSCAFG00845023221) #8	PDE4C (ENSCAFG00845022978) #9	ENSCAFG00845022825 #11	JUND (ENSCAFG00845022784)	LSM4 (ENSCAFG00845022544) #12	PGPEP1 (ENSCAFG00845022461) #13	ENSCAFG00845022439	GDF15 (ENSCAFG00845022411) #14	LRRC25 (ENSCAFG00845022385) #15	SSBP4 (ENSCAFG00845021896) #16	ISYNA1 (ENSCAFG00845021270) #19	FKBP8 (ENSCAFG00845021109) #20	KXD1 (ENSCAFG00845021012) #21	UBA52 (ENSCAFG00845020932) #22	ENSCAFG00845020838 #23	CRLF1 (ENSCAFG00845020775) #24	KLHL26 (ENSCAFG00845020669) #26	CRTC1 (ENSCAFG00845020362) #27	ENSCAFG00845020236 #25	COMP (ENSCAFG00845020025) #28	UPF1 (ENSCAFG00845019866) #29	GDF1 (ENSCAFG00845019828)	CERS1 (ENSCAFG00845019662) #30	COPE (ENSCAFG00845019400) #31	DDX49 (ENSCAFG00845019266) #32	HOMER3 (ENSCAFG00845019115) #33	SUGP2 (ENSCAFG00845018888) #34	ARMC6 (ENSCAFG00845018765) #35	SLC25A42 (ENSCAFG00845018653) #37
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00390000010450	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395.j #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Mustelinae	ANCESTRAL SPECIES	10	ENSGT00390000010450	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395.j #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
American mink	MODERN SPECIES	58	IFI30 (ENSNVIG00000017558)	MPV17L2 (ENSNVIG00000017572) #7	RAB3A (ENSNVIG00000017588) #8	PDE4C (ENSNVIG00000017617) #9	ENSNVIG00000017808 #11	JUND (ENSNVIG00000017813)	LSM4 (ENSNVIG00000017819) #12	PGPI (ENSNVIG00000017857) #13	GDF15 (ENSNVIG00000017900) #14	LRRC25 (ENSNVIG00000017909) #15	SSBP4 (ENSNVIG00000017915) #16	ISYNA1 (ENSNVIG00000017993) #17	ELL (ENSNVIG00000018054) #19	FKBP8 (ENSNVIG00000018099) #20	KXD1 (ENSNVIG00000018138) #21	UBA52 (ENSNVIG00000018210) #22	REX1BD (ENSNVIG00000018234) #23	CRLF1 (ENSNVIG00000018244) #24	TMEM59L (ENSNVIG00000018259) #25	KLHL26 (ENSNVIG00000018276) #26	CRTC1 (ENSNVIG00000018294) #27	COMP (ENSNVIG00000018415) #28	UPF1 (ENSNVIG00000019863) #29	GDF1 (ENSNVIG00000019930)	CERS1 (ENSNVIG00000019939) #30	COPE (ENSNVIG00000019958) #31	DDX49 (ENSNVIG00000020003) #32	HOMER3 (ENSNVIG00000020032) #33	SUGP2 (ENSNVIG00000020116) #34	ARMC6 (ENSNVIG00000020143) #35	S2542 (ENSNVIG00000020166) #37
Ursidae	ANCESTRAL SPECIES	11	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00940000166941	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395.j #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Ursus	ANCESTRAL SPECIES	5	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT00940000156018.A #11	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395.j #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35	ENSGT00940000158163 #37
Polar bear	MODERN SPECIES	255	MAST3 (ENSUMAG00000009640)	PIK3R2 (ENSUMAG00000009514)	IFI30 (ENSUMAG00000009491)	MPV17L2 (ENSUMAG00000009485) #7	RAB3A (ENSUMAG00000009464) #8	PDE4C (ENSUMAG00000009070) #9	ENSUMAG00000009018 #11	LSM4 (ENSUMAG00000009013) #12	PGPEP1 (ENSUMAG00000009009) #13	GDF15 (ENSUMAG00000009006) #14	LRRC25 (ENSUMAG00000009005) #15	ENSUMAG00000009000 #16	ELL (ENSUMAG00000008994) #19	FKBP8 (ENSUMAG00000008964) #20	KXD1 (ENSUMAG00000008955) #21	UBA52 (ENSUMAG00000008953) #22	ENSUMAG00000008945 #23	ENSUMAG00000008937	CRTC1 (ENSUMAG00000008860) #27	COMP (ENSUMAG00000007436) #28	UPF1 (ENSUMAG00000006652) #29	COPE (ENSUMAG00000006505) #31	DDX49 (ENSUMAG00000006489) #32	HOMER3 (ENSUMAG00000006477) #33	SUGP2 (ENSUMAG00000006467) #34	ARMC6 (ENSUMAG00000006462) #35	SLC25A42 (ENSUMAG00000006458) #37	TMEM161A (ENSUMAG00000006455)	MEF2B (ENSUMAG00000006437)	BORCS8 (ENSUMAG00000006425)	RFXANK (ENSUMAG00000006419)
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	928																ENSAMEG00000029441 #22	ENSAMEG00000031062 #22
Giant Panda	MODERN SPECIES	928															ENSAMEG00000029441 #22	ENSAMEG00000031062 #22
Giant Panda	MODERN SPECIES	1154																ENSAMEG00000026263 #22
Giant Panda	MODERN SPECIES	14	IFI30 (ENSAMEG00000011068)	ENSAMEG00000011081 #7	RAB3A (ENSAMEG00000011085) #8	PDE4C (ENSAMEG00000011097) #9	ENSAMEG00000025141 #11	JUND (ENSAMEG00000025896)	ENSAMEG00000011162	PGPEP1 (ENSAMEG00000027815) #13	GDF15 (ENSAMEG00000011178) #14	LRRC25 (ENSAMEG00000011181) #15	SSBP4 (ENSAMEG00000011185) #16	ISYNA1 (ENSAMEG00000011239) #17	ELL (ENSAMEG00000011276) #19	ENSAMEG00000011325 #20	ENSAMEG00000011348 #21	UBA52 (ENSAMEG00000011356) #22	REX1BD (ENSAMEG00000011371) #23	CRLF1 (ENSAMEG00000011375) #24	TMEM59L (ENSAMEG00000011379) #25	KLHL26 (ENSAMEG00000011385) #26	CRTC1 (ENSAMEG00000011390) #27	COMP (ENSAMEG00000011419) #28	UPF1 (ENSAMEG00000011474) #29	CERS1 (ENSAMEG00000011517) #30	COPE (ENSAMEG00000011524) #31	DDX49 (ENSAMEG00000011566) #32	HOMER3 (ENSAMEG00000011595) #33	SUGP2 (ENSAMEG00000011613) #34	ARMC6 (ENSAMEG00000011621) #35	SLC25A42 (ENSAMEG00000027218) #37	TMEM161A (ENSAMEG00000011655)
Felidae	ANCESTRAL SPECIES	17	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT01030000234883 #10	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35
Cat	MODERN SPECIES	1	MPV17L2 (ENSFCAG00000002478) #7	RAB3A (ENSFCAG00000002479) #8	PDE4C (ENSFCAG00000007525) #9	ENSFCAG00000047561 #10	IQCN (ENSFCAG00000007527) #11	JUND (ENSFCAG00000043242)	LSM4 (ENSFCAG00000040580) #12	PGPEP1 (ENSFCAG00000045024) #13	GDF15 (ENSFCAG00000009733) #14	LRRC25 (ENSFCAG00000009734) #15	SSBP4 (ENSFCAG00000009736) #16	ISYNA1 (ENSFCAG00000009738) #17	ELL (ENSFCAG00000009739) #19	FKBP8 (ENSFCAG00000009741) #20	KXD1 (ENSFCAG00000033273) #21	UBA52 (ENSFCAG00000009745) #22	REX1BD (ENSFCAG00000024240) #23	ENSFCAG00000033106	CRLF1 (ENSFCAG00000009747) #24	TMEM59L (ENSFCAG00000009749) #25	KLHL26 (ENSFCAG00000042696) #26	CRTC1 (ENSFCAG00000009752) #27	COMP (ENSFCAG00000009754) #28	UPF1 (ENSFCAG00000009757) #29	CERS1 (ENSFCAG00000023920) #31	DDX49 (ENSFCAG00000009760) #32	HOMER3 (ENSFCAG00000009762) #33	SUGP2 (ENSFCAG00000009765) #34	ARMC6 (ENSFCAG00000009767) #35	SLC25A42 (ENSFCAG00000009770) #37	TMEM161A (ENSFCAG00000009771)
Panthera	ANCESTRAL SPECIES	1	ENSGT00390000010450	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35
Tiger	MODERN SPECIES	281	ENSPTIG00000021064	MAST3 (ENSPTIG00000021248)	ENSPTIG00000002114	IFI30 (ENSPTIG00000003466)	MPV17L2 (ENSPTIG00000003892) #7	RAB3A (ENSPTIG00000004193) #8	PDE4C (ENSPTIG00000005389) #9	LSM4 (ENSPTIG00000006306) #12	PGPEP1 (ENSPTIG00000006509) #13	LRRC25 (ENSPTIG00000006894) #15	SSBP4 (ENSPTIG00000007035) #16	ISYNA1 (ENSPTIG00000007457) #17	ELL (ENSPTIG00000007637) #19	FKBP8 (ENSPTIG00000008090) #20	KXD1 (ENSPTIG00000008232) #21	UBA52 (ENSPTIG00000008713) #22	ENSPTIG00000008919 #23	CRLF1 (ENSPTIG00000009041) #24	TMEM59L (ENSPTIG00000009187) #25	ENSPTIG00000009230 #26	ENSPTIG00000009351 #26	CRTC1 (ENSPTIG00000009427) #27	ENSPTIG00000010043 #28	UPF1 (ENSPTIG00000010159) #29	GDF1 (ENSPTIG00000010670)	CERS1 (ENSPTIG00000010849) #30	COPE (ENSPTIG00000010957) #31	DDX49 (ENSPTIG00000011259) #32	HOMER3 (ENSPTIG00000011533) #33	SUGP2 (ENSPTIG00000012003) #34	ARMC6 (ENSPTIG00000012073) #35
Panthera_a	ANCESTRAL SPECIES		ENSGT00390000010450	ENSGT00940000160620 #7	ENSGT00940000158959.b #8	ENSGT00940000162285 #9	ENSGT00940000156018.A #11	ENSGT00940000162806	ENSGT00610000086173 #12	ENSGT00390000015368.a.a #13	ENSGT00940000161872 #14	ENSGT00390000004001 #15	ENSGT00950000183049.C #16	ENSGT00390000018395 #17	ENSGT00940000155914 #19	ENSGT00940000156705 #20	ENSGT00530000064192 #21	ENSGT00940000153593.c.a #22	ENSGT00390000011631 #23	ENSGT00910000147684	ENSGT00940000156569.a.b #24	ENSGT00390000008279.b #25	ENSGT00940000159238 #26	ENSGT00390000010652.D.b #27	ENSGT00940000162169 #28	ENSGT00940000157413 #29	ENSGT00940000162926	ENSGT01030000234515.b #30	ENSGT00390000003478 #31	ENSGT00730000111231 #32	ENSGT00940000158081 #33	ENSGT00410000025695.b #34	ENSGT00390000002913 #35
lion	MODERN SPECIES	2	IFI30 (ENSPLOG00000004199)	MPV17L2 (ENSPLOG00000000018) #7	RAB3A (ENSPLOG00000000031) #8	PDE4C (ENSPLOG00000000047) #9	ENSPLOG00000000074 #11	JUND (ENSPLOG00000000080)	LSM4 (ENSPLOG00000000089) #12	PGPEP1 (ENSPLOG00000000108) #13	GDF15 (ENSPLOG00000000128) #14	LRRC25 (ENSPLOG00000000140) #15	SSBP4 (ENSPLOG00000000155) #16	ISYNA1 (ENSPLOG00000000180) #17	ELL (ENSPLOG00000000208) #19	FKBP8 (ENSPLOG00000000234) #20	KXD1 (ENSPLOG00000000255) #21	UBA52 (ENSPLOG00000000273) #22	REX1BD (ENSPLOG00000000289) #23	ENSPLOG00000000303	CRLF1 (ENSPLOG00000000319) #24	TMEM59L (ENSPLOG00000000339) #25	KLHL26 (ENSPLOG00000000360) #26	CRTC1 (ENSPLOG00000000409) #27	COMP (ENSPLOG00000000492) #28	UPF1 (ENSPLOG00000000562) #29	GDF1 (ENSPLOG00000000580)	CERS1 (ENSPLOG00000000599) #30	COPE (ENSPLOG00000000628) #31	DDX49 (ENSPLOG00000000667) #32	HOMER3 (ENSPLOG00000000722) #33	SUGP2 (ENSPLOG00000000772) #34	ARMC6 (ENSPLOG00000000792) #35
leopard	MODERN SPECIES	68	IFI30 (ENSPPRG00000005435)	MPV17L2 (ENSPPRG00000005164) #7	RAB3A (ENSPPRG00000004866) #8	PDE4C (ENSPPRG00000004111) #9	JUND (ENSPPRG00000017555)	LSM4 (ENSPPRG00000018264) #12	PGPEP1 (ENSPPRG00000016192) #13	GDF15 (ENSPPRG00000013391) #14	LRRC25 (ENSPPRG00000013320) #15	SSBP4 (ENSPPRG00000012939) #16	ISYNA1 (ENSPPRG00000011081) #17	ELL (ENSPPRG00000009009) #19	ENSPPRG00000008580 #19	FKBP8 (ENSPPRG00000008402) #20	KXD1 (ENSPPRG00000007892) #21	UBA52 (ENSPPRG00000006788) #22	REX1BD (ENSPPRG00000004571) #23	CRLF1 (ENSPPRG00000004235) #24	TMEM59L (ENSPPRG00000003959) #25	KLHL26 (ENSPPRG00000003359) #26	CRTC1 (ENSPPRG00000001977) #27	COMP (ENSPPRG00000000723) #28	UPF1 (ENSPPRG00000023470) #29	GDF1 (ENSPPRG00000024438)	CERS1 (ENSPPRG00000021419) #30	COPE (ENSPPRG00000019668) #31	DDX49 (ENSPPRG00000013274) #32	HOMER3 (ENSPPRG00000013004) #33	SUGP2 (ENSPPRG00000010924) #34	ARMC6 (ENSPPRG00000009582) #35	SLC25A42 (ENSPPRG00000008936) #37