Mammalia	ANCESTRAL SPECIES	17	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000163565	ENSGT00390000014553	ENSGT00940000162571 #19	ENSGT00940000167236	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Theria	ANCESTRAL SPECIES	16	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000163565	ENSGT00390000014553	ENSGT00940000162571 #19	ENSGT00940000167236	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Eutheria	ANCESTRAL SPECIES		ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000163565	ENSGT00940000162160	ENSGT00390000014553	ENSGT00940000162571 #19	ENSGT00940000163979	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Glires	ANCESTRAL SPECIES		ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Rodentia	ANCESTRAL SPECIES		ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.f	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Rodentia_A	ANCESTRAL SPECIES		ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.f	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Sciuridae	ANCESTRAL SPECIES	3	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.f.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Marmotini	ANCESTRAL SPECIES		ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630.c	ENSGT00940000162160	ENSGT00390000014553	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Alpin marmot	MODERN SPECIES	15													LRRC38 (ENSMMMG00000021887) #19	ENSMMMG00000021882 #20	PRDM2 (ENSMMMG00000021858) #21	KAZN (ENSMMMG00000021835) #22	TMEM51 (ENSMMMG00000021802) #23	FHAD1 (ENSMMMG00000021774) #24	EFHD2 (ENSMMMG00000021754) #25	ENSMMMG00000021744 #26	CASP9 (ENSMMMG00000021730) #27	DNAJC16 (ENSMMMG00000021719) #28	AGMAT (ENSMMMG00000021713) #29	DDI2 (ENSMMMG00000021707) #30	PLEKHM2 (ENSMMMG00000021689) #31	SLC25A34 (ENSMMMG00000021668) #32	TMEM82 (ENSMMMG00000021661) #33	FBLIM1 (ENSMMMG00000021649) #34	ENSMMMG00000021647 #35	ZBTB17 (ENSMMMG00000021636) #36	SRARP (ENSMMMG00000021634) #37
Marmotini_b	ANCESTRAL SPECIES		ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630.c	ENSGT00940000162160	ENSGT00390000014553	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Squirrel	DUPLICATION
Squirrel	MODERN SPECIES	74	NPPB (ENSSTOG00000020778)	KIAA2013 (ENSSTOG00000027586)	PLOD1 (ENSSTOG00000009927)	MFN2 (ENSSTOG00000005705)	MIIP (ENSSTOG00000024734)	TNFRSF1B (ENSSTOG00000024605)	VPS13D (ENSSTOG00000005519)	DHRS3 (ENSSTOG00000016015)	AADACL4 (ENSSTOG00000019534)	AADACL3 (ENSSTOG00000007059)	CFAP107 (ENSSTOG00000009816)	LRRC38 (ENSSTOG00000023111) #19	PDPN (ENSSTOG00000032629) #20	PRDM2 (ENSSTOG00000019848) #21	ENSSTOG00000023112 #22	ENSSTOG00000030433 #22	TMEM51 (ENSSTOG00000020167) #23	FHAD1 (ENSSTOG00000023646) #24	EFHD2 (ENSSTOG00000025403) #25	ENSSTOG00000032931	ENSSTOG00000021532 #26	ENSSTOG00000028042	DNAJC16 (ENSSTOG00000013804) #28	AGMAT (ENSSTOG00000013813) #29	DDI2 (ENSSTOG00000019447) #30	RSC1A1 (ENSSTOG00000025982)	PLEKHM2 (ENSSTOG00000013821) #31	SLC25A34 (ENSSTOG00000013833) #32	TMEM82 (ENSSTOG00000025954) #33	FBLIM1 (ENSSTOG00000028645) #34	ENSSTOG00000029207 #35
Squirrel	MODERN SPECIES	74	ENSSTOG00000007663	NPPB (ENSSTOG00000020778)	KIAA2013 (ENSSTOG00000027586)	PLOD1 (ENSSTOG00000009927)	MFN2 (ENSSTOG00000005705)	MIIP (ENSSTOG00000024734)	TNFRSF1B (ENSSTOG00000024605)	VPS13D (ENSSTOG00000005519)	DHRS3 (ENSSTOG00000016015)	AADACL4 (ENSSTOG00000019534)	AADACL3 (ENSSTOG00000007059)	CFAP107 (ENSSTOG00000009816)	LRRC38 (ENSSTOG00000023111) #19	PDPN (ENSSTOG00000032629) #20	PRDM2 (ENSSTOG00000019848) #21	ENSSTOG00000023112 #22	ENSSTOG00000030433 #22	TMEM51 (ENSSTOG00000020167) #23	FHAD1 (ENSSTOG00000023646) #24	EFHD2 (ENSSTOG00000025403) #25	ENSSTOG00000032931	ENSSTOG00000021532 #26	ENSSTOG00000028042	DNAJC16 (ENSSTOG00000013804) #28	AGMAT (ENSSTOG00000013813) #29	DDI2 (ENSSTOG00000019447) #30	RSC1A1 (ENSSTOG00000025982)	PLEKHM2 (ENSSTOG00000013821) #31	SLC25A34 (ENSSTOG00000013833) #32	TMEM82 (ENSSTOG00000025954) #33	FBLIM1 (ENSSTOG00000028645) #34
Arctic ground squirrel	MODERN SPECIES	451												LRRC38 (ENSUPAG00010007763) #19	PDPN (ENSUPAG00010007766) #20	PRDM2 (ENSUPAG00010007769) #21	ENSUPAG00010007797 ##22	KAZN (ENSUPAG00010007804) #22	TMEM51 (ENSUPAG00010007834) #23	FHAD1 (ENSUPAG00010007841) #24	EFHD2 (ENSUPAG00010007892) #25
Eurasian red squirrel	MODERN SPECIES		MFN2 (ENSSVLG00005006764)	MIIP (ENSSVLG00005006797)	TNFRSF8 (ENSSVLG00005006831)	ENSSVLG00005006934	TNFRSF1B (ENSSVLG00005006983)	VPS13D (ENSSVLG00005007158)	DHRS3 (ENSSVLG00005007738)	ENSSVLG00005007795	ENSSVLG00005007846	AADACL3 (ENSSVLG00005007922)	CFAP107 (ENSSVLG00005007956)	ENSSVLG00005008079	LRRC38 (ENSSVLG00005008488) #19	PDPN (ENSSVLG00005008527) #20	PRDM2 (ENSSVLG00005008674) #21	KAZN (ENSSVLG00005008929) #22	TMEM51 (ENSSVLG00005009207) #23	FHAD1 (ENSSVLG00005009255) #24	EFHD2 (ENSSVLG00005009504) #25	CTRC (ENSSVLG00005009531)	ENSSVLG00005009617 #26	ENSSVLG00005009810 #26	ENSSVLG00005009886	DNAJC16 (ENSSVLG00005009925) #28	ENSSVLG00005009978	AGMAT (ENSSVLG00005010003) #29	DDI2 (ENSSVLG00005010074) #30	RSC1A1 (ENSSVLG00005010092)	PLEKHM2 (ENSSVLG00005010150) #31	SLC25A34 (ENSSVLG00005010194) #32	TMEM82 (ENSSVLG00005010237) #33
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630.h	ENSGT00940000157630.g.a	ENSGT00940000157630.g.b	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.e.b.c	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000170582	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000007958	TCEANC2 (ENSHGLG00000046573)	ENSHGLG00000043225	LRRC42 (ENSHGLG00000000742)	ENSHGLG00000001352	ENSHGLG00000040583	ENSHGLG00000042903	ENSHGLG00000046232	NDC1 (ENSHGLG00000001547)	ENSHGLG00000041952	LRP8 (ENSHGLG00000001818)	ENSHGLG00000001648	ENSHGLG00000002034	CPT2 (ENSHGLG00000003070)	ENSHGLG00000035804	ENSHGLG00000009940 #22	TMEM51 (ENSHGLG00000013366) #23	FHAD1 (ENSHGLG00000018196) #24	EFHD2 (ENSHGLG00000046486) #25	CTRC (ENSHGLG00000018486)	ENSHGLG00000016895 #26	CASP9 (ENSHGLG00000019310) #27	DNAJC16 (ENSHGLG00000014574) #28	AGMAT (ENSHGLG00000007473) #29	ENSHGLG00000038027	PLEKHM2 (ENSHGLG00000007190) #31	SLC25A34 (ENSHGLG00000032560) #32	TMEM82 (ENSHGLG00000011424) #33	FBLIM1 (ENSHGLG00000019134) #34	ENSHGLG00000014407	SPEN (ENSHGLG00000032487)
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630.h	ENSGT00940000157630.g.a	ENSGT00940000157630.g.b	ENSGT00940000162160	ENSGT00390000014553	ENSGT00940000162571 #19	ENSGT00940000170582	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Hystricomorpha_b	ANCESTRAL SPECIES	7													ENSGT00940000162571 #19	ENSGT00940000170582	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Long-tailed chinchilla	DUPLICATION
Long-tailed chinchilla	MODERN SPECIES	234													LRRC38 (ENSCLAG00000002559) #19	ENSCLAG00000002299	PRDM2 (ENSCLAG00000004362) #21	ENSCLAG00000003967 #22	ENSCLAG00000003684 #22	TMEM51 (ENSCLAG00000003533) #23	FHAD1 (ENSCLAG00000012202) #24	EFHD2 (ENSCLAG00000014606) #25	CTRC (ENSCLAG00000010834)	ENSCLAG00000010512 #26	CASP9 (ENSCLAG00000003082) #27	DNAJC16 (ENSCLAG00000002114) #28	AGMAT (ENSCLAG00000004055) #29	ENSCLAG00000003693	PLEKHM2 (ENSCLAG00000003128) #31	SLC25A34 (ENSCLAG00000002647) #32	TMEM82 (ENSCLAG00000004347) #33	FBLIM1 (ENSCLAG00000003668) #34	SPEN (ENSCLAG00000002018)
Long-tailed chinchilla	MODERN SPECIES	234												LRRC38 (ENSCLAG00000002559) #19	ENSCLAG00000002299	PRDM2 (ENSCLAG00000004362) #21	ENSCLAG00000003967 #22	ENSCLAG00000003684 #22	TMEM51 (ENSCLAG00000003533) #23	FHAD1 (ENSCLAG00000012202) #24	EFHD2 (ENSCLAG00000014606) #25	CTRC (ENSCLAG00000010834)	ENSCLAG00000010512 #26	CASP9 (ENSCLAG00000003082) #27	DNAJC16 (ENSCLAG00000002114) #28	AGMAT (ENSCLAG00000004055) #29	ENSCLAG00000003693	PLEKHM2 (ENSCLAG00000003128) #31	SLC25A34 (ENSCLAG00000002647) #32	TMEM82 (ENSCLAG00000004347) #33	FBLIM1 (ENSCLAG00000003668) #34	SPEN (ENSCLAG00000002018)	ZBTB17 (ENSCLAG00000006044) #36
Degu	DUPLICATION
Degu	MODERN SPECIES	133															PRDM2 (ENSODEG00000017400) #21	ENSODEG00000016425 #22	ENSODEG00000016473 #22	TMEM51 (ENSODEG00000016454) #23	FHAD1 (ENSODEG00000016605) #24	EFHD2 (ENSODEG00000016306) #25	CTRC (ENSODEG00000016340)	ENSODEG00000020480	ENSODEG00000016581 #26	ENSODEG00000016480	DNAJC16 (ENSODEG00000016313) #28	AGMAT (ENSODEG00000016792) #29	DDI2 (ENSODEG00000016549) #30	RSC1A1 (ENSODEG00000016320)	PLEKHM2 (ENSODEG00000016981) #31	SLC25A34 (ENSODEG00000016800) #32	TMEM82 (ENSODEG00000016458) #33
Degu	MODERN SPECIES	133														PRDM2 (ENSODEG00000017400) #21	ENSODEG00000016425 #22	ENSODEG00000016473 #22	TMEM51 (ENSODEG00000016454) #23	FHAD1 (ENSODEG00000016605) #24	EFHD2 (ENSODEG00000016306) #25	CTRC (ENSODEG00000016340)	ENSODEG00000020480	ENSODEG00000016581 #26	ENSODEG00000016480	DNAJC16 (ENSODEG00000016313) #28	AGMAT (ENSODEG00000016792) #29	DDI2 (ENSODEG00000016549) #30	RSC1A1 (ENSODEG00000016320)	PLEKHM2 (ENSODEG00000016981) #31	SLC25A34 (ENSODEG00000016800) #32	TMEM82 (ENSODEG00000016458) #33	FBLIM1 (ENSODEG00000016558) #34
Guinea pig	DUPLICATION
Guinea pig	MODERN SPECIES	25	PLOD1 (ENSCPOG00000020909)	MFN2 (ENSCPOG00000006834)	MIIP (ENSCPOG00000032652)	ENSCPOG00000009191	TNFRSF1B (ENSCPOG00000020299)	VPS13D (ENSCPOG00000010440)	DHRS3 (ENSCPOG00000001600)	ENSCPOG00000010237	ENSCPOG00000015038	ENSCPOG00000011374	AADACL3 (ENSCPOG00000000228)	CFAP107 (ENSCPOG00000003643)	LRRC38 (ENSCPOG00000031681) #19	ENSCPOG00000038973	PRDM2 (ENSCPOG00000038436) #21	ENSCPOG00000007591 #22	ENSCPOG00000035462 #22	TMEM51 (ENSCPOG00000035704) #23	FHAD1 (ENSCPOG00000014449) #24	EFHD2 (ENSCPOG00000022076) #25	CTRC (ENSCPOG00000034507)	ENSCPOG00000039418 #26	ENSCPOG00000038747 #26	CASP9 (ENSCPOG00000012051) #27	DNAJC16 (ENSCPOG00000012059) #28	AGMAT (ENSCPOG00000026931) #29	DDI2 (ENSCPOG00000020885) #30	RSC1A1 (ENSCPOG00000012066)	PLEKHM2 (ENSCPOG00000012069) #31	SLC25A34 (ENSCPOG00000012078) #32	TMEM82 (ENSCPOG00000012084) #33
Guinea pig	MODERN SPECIES	25	MFN2 (ENSCPOG00000006834)	MIIP (ENSCPOG00000032652)	ENSCPOG00000009191	TNFRSF1B (ENSCPOG00000020299)	VPS13D (ENSCPOG00000010440)	DHRS3 (ENSCPOG00000001600)	ENSCPOG00000010237	ENSCPOG00000015038	ENSCPOG00000011374	AADACL3 (ENSCPOG00000000228)	CFAP107 (ENSCPOG00000003643)	LRRC38 (ENSCPOG00000031681) #19	ENSCPOG00000038973	PRDM2 (ENSCPOG00000038436) #21	ENSCPOG00000007591 #22	ENSCPOG00000035462 #22	TMEM51 (ENSCPOG00000035704) #23	FHAD1 (ENSCPOG00000014449) #24	EFHD2 (ENSCPOG00000022076) #25	CTRC (ENSCPOG00000034507)	ENSCPOG00000039418 #26	ENSCPOG00000038747 #26	CASP9 (ENSCPOG00000012051) #27	DNAJC16 (ENSCPOG00000012059) #28	AGMAT (ENSCPOG00000026931) #29	DDI2 (ENSCPOG00000020885) #30	RSC1A1 (ENSCPOG00000012066)	PLEKHM2 (ENSCPOG00000012069) #31	SLC25A34 (ENSCPOG00000012078) #32	TMEM82 (ENSCPOG00000012084) #33	FBLIM1 (ENSCPOG00000024867) #34
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.e.a	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630.a	ENSGT00940000157630.b.b	ENSGT00940000157630.b.a	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.e.a	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Muroidea	ANCESTRAL SPECIES	3	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630.a.a	ENSGT00940000157630.a.b	ENSGT00940000157630.b.b	ENSGT00940000157630.b.a	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.e.a.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	1803																ENSNGAG00000013647 #22	ENSNGAG00000018275 #22	Tmem51 (ENSNGAG00000012512) #23	Fhad1 (ENSNGAG00000002450) #24	Efhd2 (ENSNGAG00000018634) #25	ENSNGAG00000020581	Cela2a (ENSNGAG00000019296) #26	Casp9 (ENSNGAG00000003405) #27	Dnajc16 (ENSNGAG00000013158) #28	Agmat (ENSNGAG00000006410) #29	ENSNGAG00000008573 #30	ENSNGAG00000011605	Plekhm2 (ENSNGAG00000018802) #31	Slc25a34 (ENSNGAG00000019484) #32	Tmem82 (ENSNGAG00000020347) #33	Fblim1 (ENSNGAG00000017164) #34
Upper Galilee mountains blind mole rat	MODERN SPECIES	1803															ENSNGAG00000013647 #22	ENSNGAG00000018275 #22	Tmem51 (ENSNGAG00000012512) #23	Fhad1 (ENSNGAG00000002450) #24	Efhd2 (ENSNGAG00000018634) #25	ENSNGAG00000020581	Cela2a (ENSNGAG00000019296) #26	Casp9 (ENSNGAG00000003405) #27	Dnajc16 (ENSNGAG00000013158) #28	Agmat (ENSNGAG00000006410) #29	ENSNGAG00000008573 #30	ENSNGAG00000011605	Plekhm2 (ENSNGAG00000018802) #31	Slc25a34 (ENSNGAG00000019484) #32	Tmem82 (ENSNGAG00000020347) #33	Fblim1 (ENSNGAG00000017164) #34	Spen (ENSNGAG00000000641)
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.b	ENSGT00940000163565	ENSGT00940000157630.b.a	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Murinae	ANCESTRAL SPECIES	2	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.e.a.b.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a	ENSGT01030000234531.A.b.b.b.e.a.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Mus	ANCESTRAL SPECIES	3	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.e.a.b.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Mus_A	ANCESTRAL SPECIES	3	ENSGT01030000234531.A.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.e.a.b.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Mus_B	ANCESTRAL SPECIES	5	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.e.a.b.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.b.a.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Mus_C	ANCESTRAL SPECIES	2	ENSGT00860000136337	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.e.a.b.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.b.a.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
spretus	MODERN SPECIES	13	MGP_SPRETEiJ_G0027754	MGP_SPRETEiJ_G0027753	MGP_SPRETEiJ_G0027752	MGP_SPRETEiJ_G0027751	MGP_SPRETEiJ_G0027750	MGP_SPRETEiJ_G0027749	MGP_SPRETEiJ_G0027748	MGP_SPRETEiJ_G0027747	MGP_SPRETEiJ_G0027746	Oog4 (MGP_SPRETEiJ_G0027745)	Pramel12 (MGP_SPRETEiJ_G0027744)	Pramel1 (MGP_SPRETEiJ_G0027743)	Lrrc38 (MGP_SPRETEiJ_G0027742) #19	Pdpn (MGP_SPRETEiJ_G0027741) #20	Prdm2 (MGP_SPRETEiJ_G0027740) #21	Kazn (MGP_SPRETEiJ_G0027739) #22	Tmem51 (MGP_SPRETEiJ_G0027738) #23	Fhad1 (MGP_SPRETEiJ_G0027737) #24	Efhd2 (MGP_SPRETEiJ_G0027736) #25	MGP_SPRETEiJ_G0027735	Cela2a (MGP_SPRETEiJ_G0027734) #26	Casp9 (MGP_SPRETEiJ_G0027733) #27	Dnajc16 (MGP_SPRETEiJ_G0027732) #28	Agmat (MGP_SPRETEiJ_G0027731) #29	MGP_SPRETEiJ_G0027730	MGP_SPRETEiJ_G0027729	Plekhm2 (MGP_SPRETEiJ_G0027728) #31	Slc25a34 (MGP_SPRETEiJ_G0027727) #32	Tmem82 (MGP_SPRETEiJ_G0027726) #33	Fblim1 (MGP_SPRETEiJ_G0027725) #34	Spen (MGP_SPRETEiJ_G0027724)
Steppe mouse	MODERN SPECIES	3329							ENSMSIG00000015535	Oog4 (ENSMSIG00000015458)	Pramel12 (ENSMSIG00000015426)	Pramel1 (ENSMSIG00000015411)	ENSMSIG00000015393 #19	Pdpn (ENSMSIG00000015317) #20	ENSMSIG00000015307	Prdm2 (ENSMSIG00000015257) #21	ENSMSIG00000015235 ##22	Kazn (ENSMSIG00000015206) #22	ENSMSIG00000015199	Tmem51 (ENSMSIG00000015190) #23	Fhad1 (ENSMSIG00000014775) #24	Efhd2 (ENSMSIG00000014750) #25	ENSMSIG00000014707	Cela2a (ENSMSIG00000014686) #26	Casp9 (ENSMSIG00000014653) #27	Dnajc16 (ENSMSIG00000014635) #28	Agmat (ENSMSIG00000014614) #29	ENSMSIG00000014561	Plekhm2 (ENSMSIG00000014394) #31	Slc25a34 (ENSMSIG00000014377) #32	Tmem82 (ENSMSIG00000014350) #33	Fblim1 (ENSMSIG00000014313) #34	Spen (ENSMSIG00000014208)
Mouse	MODERN SPECIES	13	Pramel24 (ENSMUSG00000046435)	Pramel23 (ENSMUSG00000070617)	Pramel22 (ENSMUSG00000078513)	Pramel21 (ENSMUSG00000066688)	Pramel20 (ENSMUSG00000070618)	Gm13057 (ENSMUSG00000096154)	Gm13040 (ENSMUSG00000070616)	Gm13043 (ENSMUSG00000095409)	Oog4 (ENSMUSG00000047799)	Pramel12 (ENSMUSG00000046862)	Pramel1 (ENSMUSG00000041805)	Lrrc38 (ENSMUSG00000028584) #19	Pdpn (ENSMUSG00000028583) #20	Prdm2 (ENSMUSG00000057637) #21	6330411D24Rik (ENSMUSG00000110067)	Kazn (ENSMUSG00000040606) #22	Tmem51 (ENSMUSG00000040616) #23	Fhad1 (ENSMUSG00000051435) #24	Efhd2 (ENSMUSG00000040659) #25	Ctrc (ENSMUSG00000062478)	Cela2a (ENSMUSG00000058579) #26	Casp9 (ENSMUSG00000028914) #27	Dnajc16 (ENSMUSG00000040697) #28	Agmat (ENSMUSG00000040706) #29	Rsc1a1 (ENSMUSG00000040715)	Ddi2 (ENSMUSG00000078515)	Plekhm2 (ENSMUSG00000028917) #31	Slc25a34 (ENSMUSG00000040740) #32	Tmem82 (ENSMUSG00000043085) #33	Fblim1 (ENSMUSG00000006219) #34	Spen (ENSMUSG00000040761)
Ryukyu mouse	MODERN SPECIES	13	Aadacl4fm2 (MGP_CAROLIEiJ_G0026774)	Aadacl4fm1 (MGP_CAROLIEiJ_G0026773)	Aadacl3 (MGP_CAROLIEiJ_G0026772)	MGP_CAROLIEiJ_G0026771	Cfap107 (MGP_CAROLIEiJ_G0026770)	Pramel13 (MGP_CAROLIEiJ_G0026769)	MGP_CAROLIEiJ_G0026768	MGP_CAROLIEiJ_G0026767	MGP_CAROLIEiJ_G0026766	Oog4 (MGP_CAROLIEiJ_G0026765)	Pramel12 (MGP_CAROLIEiJ_G0026764)	Pramel1 (MGP_CAROLIEiJ_G0026763)	Lrrc38 (MGP_CAROLIEiJ_G0026762) #19	Pdpn (MGP_CAROLIEiJ_G0026761) #20	Prdm2 (MGP_CAROLIEiJ_G0026760) #21	Kazn (MGP_CAROLIEiJ_G0026759) #22	Tmem51 (MGP_CAROLIEiJ_G0026758) #23	Fhad1 (MGP_CAROLIEiJ_G0026757) #24	Efhd2 (MGP_CAROLIEiJ_G0026756) #25	MGP_CAROLIEiJ_G0026755	MGP_CAROLIEiJ_G0026754 #27	Dnajc16 (MGP_CAROLIEiJ_G0026753) #28	Agmat (MGP_CAROLIEiJ_G0026752) #29	MGP_CAROLIEiJ_G0026751	MGP_CAROLIEiJ_G0026750	Plekhm2 (MGP_CAROLIEiJ_G0026749) #31	Slc25a34 (MGP_CAROLIEiJ_G0026748) #32	Tmem82 (MGP_CAROLIEiJ_G0026747) #33	Fblim1 (MGP_CAROLIEiJ_G0026746) #34	Spen (MGP_CAROLIEiJ_G0026745)	Zbtb17 (MGP_CAROLIEiJ_G0026744) #36
Shrew mouse	MODERN SPECIES	19	Pramel15 (MGP_PahariEiJ_G0029106)	MGP_PahariEiJ_G0029105	MGP_PahariEiJ_G0029104	MGP_PahariEiJ_G0029103	MGP_PahariEiJ_G0029102	MGP_PahariEiJ_G0029101	MGP_PahariEiJ_G0029100	MGP_PahariEiJ_G0029099	MGP_PahariEiJ_G0029098	MGP_PahariEiJ_G0029097	Pramel12 (MGP_PahariEiJ_G0029096)	Pramel1 (MGP_PahariEiJ_G0029095)	Lrrc38 (MGP_PahariEiJ_G0029094) #19	Pdpn (MGP_PahariEiJ_G0029093) #20	Prdm2 (MGP_PahariEiJ_G0029092) #21	Kazn (MGP_PahariEiJ_G0029091) #22	Tmem51 (MGP_PahariEiJ_G0029090) #23	Fhad1 (MGP_PahariEiJ_G0029089) #24	Efhd2 (MGP_PahariEiJ_G0029088) #25	MGP_PahariEiJ_G0029087	Cela2a (MGP_PahariEiJ_G0029086) #26	Casp9 (MGP_PahariEiJ_G0029085) #27	Dnajc16 (MGP_PahariEiJ_G0029084) #28	Agmat (MGP_PahariEiJ_G0029083) #29	MGP_PahariEiJ_G0029082	MGP_PahariEiJ_G0029081	Plekhm2 (MGP_PahariEiJ_G0029080) #31	Slc25a34 (MGP_PahariEiJ_G0029079) #32	Tmem82 (MGP_PahariEiJ_G0029078) #33	Fblim1 (MGP_PahariEiJ_G0029077) #34	Spen (MGP_PahariEiJ_G0029076)
Rat	MODERN SPECIES	15	Pramef17 (ENSRNOG00000042820)	RGD1306186 (ENSRNOG00000037039)	LOC120103107 (ENSRNOG00000047341)	Oog1 (ENSRNOG00000027142)	ENSRNOG00000065869	Pramef5 (ENSRNOG00000067307)	Oog3 (ENSRNOG00000033000)	Pramef8 (ENSRNOG00000027278)	Pramef27 (ENSRNOG00000027328)	Lrrc38 (ENSRNOG00000015264) #19	Pdpn (ENSRNOG00000014961) #20	ENSRNOG00000070725	LOC100359951 (ENSRNOG00000071148)	Prdm2 (ENSRNOG00000033522) #21	6330411D24Rik (ENSRNOG00000065736)	Kazn (ENSRNOG00000014322) #22	ENSRNOG00000070661	Tmem51 (ENSRNOG00000014197) #23	Fhad1 (ENSRNOG00000028064) #24	Efhd2 (ENSRNOG00000013783) #25	Ctrc (ENSRNOG00000013745)	Cela2a (ENSRNOG00000013628) #26	Casp9 (ENSRNOG00000012944) #27	Dnajc16 (ENSRNOG00000012503) #28	Agmat (ENSRNOG00000012315) #29	Ddi2 (ENSRNOG00000012274)	Plekhm2 (ENSRNOG00000012163) #31	Tmem82 (ENSRNOG00000011970) #33	Fblim1 (ENSRNOG00000011774) #34	Spen (ENSRNOG00000033556)	Zbtb17 (ENSRNOG00000010436) #36
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00940000157630.a.a.a	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.b	ENSGT00940000163565	ENSGT00940000157630.b.a	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.b	ENSGT00940000157630.b.b	ENSGT00940000157630.b.a	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.e.a.b.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	726										Pramel12 (ENSMAUG00000013165)	Pramel1 (ENSMAUG00000017344)	Lrrc38 (ENSMAUG00000019684) #19	Pdpn (ENSMAUG00000013176) #20	Prdm2 (ENSMAUG00000017021) #21	ENSMAUG00000009108 #22	ENSMAUG00000010094 #22	Tmem51 (ENSMAUG00000007940) #23	Fhad1 (ENSMAUG00000001064) #24	Efhd2 (ENSMAUG00000001147) #25	ENSMAUG00000007283	Cela2a (ENSMAUG00000010885) #26	Casp9 (ENSMAUG00000014326) #27	Dnajc16 (ENSMAUG00000021653) #28	Agmat (ENSMAUG00000022247) #29	ENSMAUG00000020325 #30	Plekhm2 (ENSMAUG00000010838) #31	Slc25a34 (ENSMAUG00000020022) #32	Tmem82 (ENSMAUG00000007567) #33	Fblim1 (ENSMAUG00000018139) #34	Spen (ENSMAUG00000008318)	Zbtb17 (ENSMAUG00000001376) #36
Golden Hamster	MODERN SPECIES	726											Pramel12 (ENSMAUG00000013165)	Pramel1 (ENSMAUG00000017344)	Lrrc38 (ENSMAUG00000019684) #19	Pdpn (ENSMAUG00000013176) #20	Prdm2 (ENSMAUG00000017021) #21	ENSMAUG00000009108 #22	ENSMAUG00000010094 #22	Tmem51 (ENSMAUG00000007940) #23	Fhad1 (ENSMAUG00000001064) #24	Efhd2 (ENSMAUG00000001147) #25	ENSMAUG00000007283	Cela2a (ENSMAUG00000010885) #26	Casp9 (ENSMAUG00000014326) #27	Dnajc16 (ENSMAUG00000021653) #28	Agmat (ENSMAUG00000022247) #29	ENSMAUG00000020325 #30	Plekhm2 (ENSMAUG00000010838) #31	Slc25a34 (ENSMAUG00000020022) #32	Tmem82 (ENSMAUG00000007567) #33	Fblim1 (ENSMAUG00000018139) #34	Spen (ENSMAUG00000008318)
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	111	Vps13d (ENSCGRG00001023868)	Dhrs3 (ENSCGRG00001012549)	Aadacl4fm4 (ENSCGRG00001018913)	Aadacl4 (ENSCGRG00001021022)	ENSCGRG00001024601	Aadacl4fm1 (ENSCGRG00001024757)	Aadacl3 (ENSCGRG00001024964)	Cfap107 (ENSCGRG00001025039)	Pramel13 (ENSCGRG00001018269)	Pramel15 (ENSCGRG00001024569)	Pramel12 (ENSCGRG00001024998)	Pramel1 (ENSCGRG00001003207)	Lrrc38 (ENSCGRG00001015382) #19	Pdpn (ENSCGRG00001019750) #20	Prdm2 (ENSCGRG00001020470) #21	ENSCGRG00001022553 #22	Tmem51 (ENSCGRG00001023938) #23	ENSCGRG00001024256 #22	Fhad1 (ENSCGRG00001024955) #24	Efhd2 (ENSCGRG00001016692) #25	ENSCGRG00001018143	ENSCGRG00001024391 #26	Casp9 (ENSCGRG00001012293) #27	Dnajc16 (ENSCGRG00001019382) #28	Agmat (ENSCGRG00001022077) #29	ENSCGRG00001024250	Plekhm2 (ENSCGRG00001011209) #31	Slc25a34 (ENSCGRG00001021299) #32	Tmem82 (ENSCGRG00001022720) #33	Fblim1 (ENSCGRG00001024160) #34	Spen (ENSCGRG00001007725)
Chinese hamster chok1gshd	MODERN SPECIES	111	Aadacl4fm4 (ENSCGRG00001018913)	Aadacl4 (ENSCGRG00001021022)	ENSCGRG00001024601	Aadacl4fm1 (ENSCGRG00001024757)	Aadacl3 (ENSCGRG00001024964)	Cfap107 (ENSCGRG00001025039)	Pramel13 (ENSCGRG00001018269)	Pramel15 (ENSCGRG00001024569)	Pramel12 (ENSCGRG00001024998)	Pramel1 (ENSCGRG00001003207)	Lrrc38 (ENSCGRG00001015382) #19	Pdpn (ENSCGRG00001019750) #20	Prdm2 (ENSCGRG00001020470) #21	ENSCGRG00001022553 #22	Tmem51 (ENSCGRG00001023938) #23	ENSCGRG00001024256 #22	Fhad1 (ENSCGRG00001024955) #24	Efhd2 (ENSCGRG00001016692) #25	ENSCGRG00001018143	ENSCGRG00001024391 #26	Casp9 (ENSCGRG00001012293) #27	Dnajc16 (ENSCGRG00001019382) #28	Agmat (ENSCGRG00001022077) #29	ENSCGRG00001024250	Plekhm2 (ENSCGRG00001011209) #31	Slc25a34 (ENSCGRG00001021299) #32	Tmem82 (ENSCGRG00001022720) #33	Fblim1 (ENSCGRG00001024160) #34	Spen (ENSCGRG00001007725)	Zbtb17 (ENSCGRG00001019408) #36	Srarp (ENSCGRG00001024454) #37
Cricetidae_B	ANCESTRAL SPECIES	2										ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	1	ENSMOCG00000005802	E330021D16Rik (ENSMOCG00000006042)	Usp9x (ENSMOCG00000009609)	ENSMOCG00000008046	Ddx3x (ENSMOCG00000014170)	Nyx (ENSMOCG00000018188)	Cask (ENSMOCG00000007637)	Gpr34 (ENSMOCG00000016433)	Gpr82 (ENSMOCG00000003874)	ENSMOCG00000016039	Lrrc38 (ENSMOCG00000014237) #19	ENSMOCG00000015618	ENSMOCG00000018838	ENSMOCG00000021077 #21	ENSMOCG00000002830 #22	ENSMOCG00000007192 #22	Tmem51 (ENSMOCG00000009847) #23	Fhad1 (ENSMOCG00000015308) #24	Efhd2 (ENSMOCG00000002945) #25	ENSMOCG00000006919	Cela2a (ENSMOCG00000019141) #26	Casp9 (ENSMOCG00000020323) #27	Dnajc16 (ENSMOCG00000018345) #28	Agmat (ENSMOCG00000006579) #29	ENSMOCG00000008741 #30	Plekhm2 (ENSMOCG00000016353) #31	Slc25a34 (ENSMOCG00000001770) #32	Tmem82 (ENSMOCG00000004076) #33	Spen (ENSMOCG00000016083)	Zbtb17 (ENSMOCG00000005017) #36	Hspb7 (ENSMOCG00000015401)
Prairie vole	MODERN SPECIES	1	ENSMOCG00000016742	ENSMOCG00000005802	E330021D16Rik (ENSMOCG00000006042)	Usp9x (ENSMOCG00000009609)	ENSMOCG00000008046	Ddx3x (ENSMOCG00000014170)	Nyx (ENSMOCG00000018188)	Cask (ENSMOCG00000007637)	Gpr34 (ENSMOCG00000016433)	Gpr82 (ENSMOCG00000003874)	ENSMOCG00000016039	Lrrc38 (ENSMOCG00000014237) #19	ENSMOCG00000015618	ENSMOCG00000018838	ENSMOCG00000021077 #21	ENSMOCG00000002830 #22	ENSMOCG00000007192 #22	Tmem51 (ENSMOCG00000009847) #23	Fhad1 (ENSMOCG00000015308) #24	Efhd2 (ENSMOCG00000002945) #25	ENSMOCG00000006919	Cela2a (ENSMOCG00000019141) #26	Casp9 (ENSMOCG00000020323) #27	Dnajc16 (ENSMOCG00000018345) #28	Agmat (ENSMOCG00000006579) #29	ENSMOCG00000008741 #30	Plekhm2 (ENSMOCG00000016353) #31	Slc25a34 (ENSMOCG00000001770) #32	Tmem82 (ENSMOCG00000004076) #33	Spen (ENSMOCG00000016083)	Zbtb17 (ENSMOCG00000005017) #36
Northern American deer mouse	MODERN SPECIES	11	Pank4 (ENSPEMG00000018726)	Hes5 (ENSPEMG00000031266)	Tnfrsf14 (ENSPEMG00000016250)	Prxl2b (ENSPEMG00000016639)	Mmel1 (ENSPEMG00000015360)	ENSPEMG00000003914	Actrt2 (ENSPEMG00000014225)	ENSPEMG00000027963	Pramel12 (ENSPEMG00000023636)	ENSPEMG00000025426	Pramel1 (ENSPEMG00000021753)	Lrrc38 (ENSPEMG00000027448) #19	Pdpn (ENSPEMG00000007524) #20	Prdm2 (ENSPEMG00000023130) #21	ENSPEMG00000028452 ##22	Kazn (ENSPEMG00000021311) #22	Tmem51 (ENSPEMG00000031341) #23	Fhad1 (ENSPEMG00000005222) #24	Efhd2 (ENSPEMG00000001500) #25	ENSPEMG00000009764 #26	Cela2a (ENSPEMG00000023249) #26	Casp9 (ENSPEMG00000022246) #27	Dnajc16 (ENSPEMG00000023576) #28	Agmat (ENSPEMG00000022206) #29	ENSPEMG00000021491 #30	ENSPEMG00000029595	Plekhm2 (ENSPEMG00000024198) #31	Slc25a34 (ENSPEMG00000009951) #32	Tmem82 (ENSPEMG00000021877) #33	Fblim1 (ENSPEMG00000022333) #34	Spen (ENSPEMG00000022997)
Lesser Egyptian jerboa	MODERN SPECIES	63	Tnfrsf1b (ENSJJAG00000010813)	Vps13d (ENSJJAG00000013581)	Dhrs3 (ENSJJAG00000010964)	ENSJJAG00000011214	ENSJJAG00000010939	ENSJJAG00000009632	Aadacl4fm1 (ENSJJAG00000011655)	Aadacl3 (ENSJJAG00000011110)	Cfap107 (ENSJJAG00000012706)	ENSJJAG00000013886	ENSJJAG00000011316	ENSJJAG00000007952	Lrrc38 (ENSJJAG00000010300) #19	Pdpn (ENSJJAG00000011298) #20	Prdm2 (ENSJJAG00000013245) #21	Kazn (ENSJJAG00000013027) #22	Tmem51 (ENSJJAG00000007750) #23	Fhad1 (ENSJJAG00000011545) #24	Efhd2 (ENSJJAG00000005238) #25	ENSJJAG00000011961	Cela2a (ENSJJAG00000012004) #26	ENSJJAG00000010832	Dnajc16 (ENSJJAG00000007639) #28	Agmat (ENSJJAG00000000771) #29	ENSJJAG00000008758 #30	ENSJJAG00000002222	Plekhm2 (ENSJJAG00000009735) #31	Slc25a34 (ENSJJAG00000001837) #32	Tmem82 (ENSJJAG00000011441) #33	Fblim1 (ENSJJAG00000013123) #34	Spen (ENSJJAG00000010882)
Kangaroo rat	DUPLICATION
Kangaroo rat	MODERN SPECIES	380	Fam151a (ENSDORG00000013808)	Acot11 (ENSDORG00000013806)	Ssbp3 (ENSDORG00000002296)	Mrpl37 (ENSDORG00000002294)	Cyb5rl (ENSDORG00000002291)	Cdcp2 (ENSDORG00000002289)	Tceanc2 (ENSDORG00000029310)	ENSDORG00000002286	Ldlrad1 (ENSDORG00000002283)	Lrrc42 (ENSDORG00000004216)	Hspb11 (ENSDORG00000015267)	Dio1 (ENSDORG00000015264)	Yipf1 (ENSDORG00000015262)	ENSDORG00000011209 #20	Prdm2 (ENSDORG00000012558) #21	ENSDORG00000016542 #22	ENSDORG00000023515 #22	Tmem51 (ENSDORG00000015453) #23	Fhad1 (ENSDORG00000005392) #24	Efhd2 (ENSDORG00000026861) #25	ENSDORG00000016574	Cela2a (ENSDORG00000006593) #26	ENSDORG00000003973	Dnajc16 (ENSDORG00000003972) #28	Agmat (ENSDORG00000003970) #29	ENSDORG00000012305 #30	ENSDORG00000027846	Plekhm2 (ENSDORG00000008849) #31	Slc25a34 (ENSDORG00000008853) #32	Tmem82 (ENSDORG00000008854) #33	Fblim1 (ENSDORG00000002591) #34
Kangaroo rat	MODERN SPECIES	380	Acot11 (ENSDORG00000013806)	Ssbp3 (ENSDORG00000002296)	Mrpl37 (ENSDORG00000002294)	Cyb5rl (ENSDORG00000002291)	Cdcp2 (ENSDORG00000002289)	Tceanc2 (ENSDORG00000029310)	ENSDORG00000002286	Ldlrad1 (ENSDORG00000002283)	Lrrc42 (ENSDORG00000004216)	Hspb11 (ENSDORG00000015267)	Dio1 (ENSDORG00000015264)	Yipf1 (ENSDORG00000015262)	ENSDORG00000011209 #20	Prdm2 (ENSDORG00000012558) #21	ENSDORG00000016542 #22	ENSDORG00000023515 #22	Tmem51 (ENSDORG00000015453) #23	Fhad1 (ENSDORG00000005392) #24	Efhd2 (ENSDORG00000026861) #25	ENSDORG00000016574	Cela2a (ENSDORG00000006593) #26	ENSDORG00000003973	Dnajc16 (ENSDORG00000003972) #28	Agmat (ENSDORG00000003970) #29	ENSDORG00000012305 #30	ENSDORG00000027846	Plekhm2 (ENSDORG00000008849) #31	Slc25a34 (ENSDORG00000008853) #32	Tmem82 (ENSDORG00000008854) #33	Fblim1 (ENSDORG00000002591) #34	Spen (ENSDORG00000023909)
Lagomorpha	ANCESTRAL SPECIES	140	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.c	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.b #22
Pika	MODERN SPECIES	4282																KAZN (ENSOPRG00000008867) #22	ENSOPRG00000008955
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	472	TNFRSF8 (ENSOCUG00000015925)	TNFRSF1B (ENSOCUG00000014127)	VPS13D (ENSOCUG00000005551)	ENSOCUG00000029199	ENSOCUG00000003422	ENSOCUG00000026490	AADACL3 (ENSOCUG00000025025)	CFAP107 (ENSOCUG00000007517)	ENSOCUG00000008348	LRRC38 (ENSOCUG00000010759) #19	PDPN (ENSOCUG00000005899) #20	ENSOCUG00000030212	PRDM2 (ENSOCUG00000009605) #21	ENSOCUG00000028991	ENSOCUG00000017106 #22	ENSOCUG00000033717 #22
Rabbit	MODERN SPECIES	472	ENSOCUG00000003525	TNFRSF8 (ENSOCUG00000015925)	TNFRSF1B (ENSOCUG00000014127)	VPS13D (ENSOCUG00000005551)	ENSOCUG00000029199	ENSOCUG00000003422	ENSOCUG00000026490	AADACL3 (ENSOCUG00000025025)	CFAP107 (ENSOCUG00000007517)	ENSOCUG00000008348	LRRC38 (ENSOCUG00000010759) #19	PDPN (ENSOCUG00000005899) #20	ENSOCUG00000030212	PRDM2 (ENSOCUG00000009605) #21	ENSOCUG00000028991	ENSOCUG00000017106 #22	ENSOCUG00000033717 #22
Tree shrew	MODERN SPECIES	4846																KAZN (ENSTBEG00000001870) #22	ENSTBEG00000002855	TMEM51 (ENSTBEG00000004964) #23
Primates	ANCESTRAL SPECIES	4	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b	ENSGT01030000234531.A.b.b.b.a	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b	ENSGT01030000234531.A.b.b.b.a	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Lemuriformes	ANCESTRAL SPECIES		ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.b	ENSGT01030000234531.A.b.b.b.a.b	ENSGT01030000234531.A.b.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.a.a	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Lemuriformes_a	ANCESTRAL SPECIES	7	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.b	ENSGT01030000234531.A.b.b.b.a.a	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Coquerels sifaka	MODERN SPECIES	900	MFN2 (ENSPCOG00000010547)	MIIP (ENSPCOG00000014777)	ENSPCOG00000022060	TNFRSF1B (ENSPCOG00000018465)	VPS13D (ENSPCOG00000017635)	DHRS3 (ENSPCOG00000027844)	AADACL4 (ENSPCOG00000025753)	CFAP107 (ENSPCOG00000022017)	ENSPCOG00000023311	ENSPCOG00000028229	ENSPCOG00000028711	ENSPCOG00000015938	LRRC38 (ENSPCOG00000023206) #19	PDPN (ENSPCOG00000022665) #20	PRDM2 (ENSPCOG00000023710) #21	KAZN (ENSPCOG00000025583) #22	TMEM51 (ENSPCOG00000025555) #23	FHAD1 (ENSPCOG00000017698) #24	EFHD2 (ENSPCOG00000014457) #25	CTRC (ENSPCOG00000014099)	ENSPCOG00000018911 #26	CASP9 (ENSPCOG00000027379) #27	DNAJC16 (ENSPCOG00000021369) #28	AGMAT (ENSPCOG00000005823) #29	DDI2 (ENSPCOG00000011783) #30	PLEKHM2 (ENSPCOG00000023290) #31	SLC25A34 (ENSPCOG00000017561) #32	TMEM82 (ENSPCOG00000012886) #33	FBLIM1 (ENSPCOG00000021197) #34	SPEN (ENSPCOG00000021735)	ZBTB17 (ENSPCOG00000003554) #36
Greater bamboo lemur	MODERN SPECIES	166	MFN2 (ENSPSMG00000014294)	MIIP (ENSPSMG00000014217)	TNFRSF8 (ENSPSMG00000014207)	TNFRSF1B (ENSPSMG00000014195)	VPS13D (ENSPSMG00000013901)	DHRS3 (ENSPSMG00000013313)	AADACL4 (ENSPSMG00000013305)	CFAP107 (ENSPSMG00000013301)	ENSPSMG00000013286	ENSPSMG00000013280	ENSPSMG00000013272	LRRC38 (ENSPSMG00000013268) #19	ENSPSMG00000013262 #20	PRDM2 (ENSPSMG00000013250) #21	ENSPSMG00000013232	KAZN (ENSPSMG00000013157) #22	ENSPSMG00000013074	TMEM51 (ENSPSMG00000013065) #23	FHAD1 (ENSPSMG00000013063) #24	EFHD2 (ENSPSMG00000013047) #25	CTRC (ENSPSMG00000013040)	ENSPSMG00000013036 #26	CASP9 (ENSPSMG00000013007) #27	DNAJC16 (ENSPSMG00000012961) #28
Mouse lemur	MODERN SPECIES	11	NPPA (ENSMICG00000003392)	NPPB (ENSMICG00000032500)	KIAA2013 (ENSMICG00000001756)	PLOD1 (ENSMICG00000002720)	MFN2 (ENSMICG00000002730)	MIIP (ENSMICG00000038774)	TNFRSF8 (ENSMICG00000012084)	TNFRSF1B (ENSMICG00000012100)	VPS13D (ENSMICG00000012119)	DHRS3 (ENSMICG00000012203)	ENSMICG00000047522	ENSMICG00000011663	LRRC38 (ENSMICG00000046922) #19	ENSMICG00000017804 #20	PRDM2 (ENSMICG00000017803) #21	KAZN (ENSMICG00000003804) #22	TMEM51 (ENSMICG00000033140) #23	FHAD1 (ENSMICG00000003833) #24	EFHD2 (ENSMICG00000030850) #25	CTRC (ENSMICG00000003309)	ENSMICG00000046629 #26	CASP9 (ENSMICG00000003854) #27	DNAJC16 (ENSMICG00000003462) #28	AGMAT (ENSMICG00000045332) #29	RSC1A1 (ENSMICG00000013122)	PLEKHM2 (ENSMICG00000013125) #31	SLC25A34 (ENSMICG00000036236) #32	TMEM82 (ENSMICG00000044062) #33	FBLIM1 (ENSMICG00000007384) #34	SPEN (ENSMICG00000030994)	ZBTB17 (ENSMICG00000001933) #36
Bushbaby	MODERN SPECIES	124	NRIP1 (ENSOGAG00000007232)	USP25 (ENSOGAG00000013720)	ENSOGAG00000032134	CXADR (ENSOGAG00000013301)	ENSOGAG00000013303	C21orf91 (ENSOGAG00000013306)	CHODL (ENSOGAG00000028485)	TMPRSS15 (ENSOGAG00000014298)	NCAM2 (ENSOGAG00000002889)	MRPL39 (ENSOGAG00000001642)	JAM2 (ENSOGAG00000001645)	GABPA (ENSOGAG00000001648)	ENSOGAG00000033847	ADAMTS1 (ENSOGAG00000029316)	ADAMTS5 (ENSOGAG00000013024)	KAZN (ENSOGAG00000007214) #22	TMEM51 (ENSOGAG00000009791) #23	ENSOGAG00000025217 #24	EFHD2 (ENSOGAG00000025793) #25	CTRC (ENSOGAG00000009802)	ENSOGAG00000029665 #26	CASP9 (ENSOGAG00000009809) #27	DNAJC16 (ENSOGAG00000005431) #28	AGMAT (ENSOGAG00000005438) #29	DDI2 (ENSOGAG00000027709) #30	RSC1A1 (ENSOGAG00000005439)	PLEKHM2 (ENSOGAG00000008570) #31	SLC25A34 (ENSOGAG00000033455) #32	TMEM82 (ENSOGAG00000008573) #33	SPEN (ENSOGAG00000025110)	ZBTB17 (ENSOGAG00000005075) #36
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000163565	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b	ENSGT01030000234531.A.b.b.b.a	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Tarsier	MODERN SPECIES	3305															ENSTSYG00000035711	KAZN (ENSTSYG00000004799) #22	TMEM51 (ENSTSYG00000032579) #23
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000163565	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.f	ENSGT01030000234531.A.b.b.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.a	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000154570.b.u #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000154570.b.u #22
Marmoset	MODERN SPECIES	19	PLOD1 (ENSCJAG00000013459)	MFN2 (ENSCJAG00000013494)	MIIP (ENSCJAG00000013541)	ENSCJAG00000013559	TNFRSF1B (ENSCJAG00000013571)	VPS13D (ENSCJAG00000013580)	ENSCJAG00000084788	DHRS3 (ENSCJAG00000013708)	ENSCJAG00000076214	ENSCJAG00000013722	CFAP107 (ENSCJAG00000040949)	ENSCJAG00000013747	LRRC38 (ENSCJAG00000013769) #19	PDPN (ENSCJAG00000013772) #20	PRDM2 (ENSCJAG00000013782) #21	KAZN (ENSCJAG00000008920) #22	TMEM51 (ENSCJAG00000008910) #23	FHAD1 (ENSCJAG00000008888) #24	EFHD2 (ENSCJAG00000068517) #25	CTRC (ENSCJAG00000008844)	ENSCJAG00000008785 #26	CASP9 (ENSCJAG00000008732) #27	DNAJC16 (ENSCJAG00000008656) #28	ENSCJAG00000084076	AGMAT (ENSCJAG00000008645) #29	DDI2 (ENSCJAG00000008625) #30	RSC1A1 (ENSCJAG00000040229)	PLEKHM2 (ENSCJAG00000008601) #31	SLC25A34 (ENSCJAG00000008596) #32	TMEM82 (ENSCJAG00000008582) #33	FBLIM1 (ENSCJAG00000008580) #34
Mas night monkey	MODERN SPECIES	760	TUBA8 (ENSANAG00000020993)	PEX26 (ENSANAG00000033468)	ENSANAG00000024037	MICAL3 (ENSANAG00000021919)	BID (ENSANAG00000035339)	BCL2L13 (ENSANAG00000017578)	ENSANAG00000037241	SLC25A18 (ENSANAG00000036909)	ENSANAG00000021362	CECR2 (ENSANAG00000035159)	ENSANAG00000038012	ENSANAG00000027660	HDHD5 (ENSANAG00000022048)	TMEM121B (ENSANAG00000024835)	ENSANAG00000033260	ENSANAG00000031012 #22	ENSANAG00000025732	ENSANAG00000034686	RTN4R (ENSANAG00000032599)	CCDC188 (ENSANAG00000028823)	ZDHHC8 (ENSANAG00000032330)	ENSANAG00000024454	TRMT2A (ENSANAG00000035461)	DGCR8 (ENSANAG00000013710)	TANGO2 (ENSANAG00000035133)	ARVCF (ENSANAG00000029182)	COMT (ENSANAG00000024217)	TXNRD2 (ENSANAG00000020052)	GNB1L (ENSANAG00000015533)	TBX1 (ENSANAG00000024241)	GP1BB (ENSANAG00000033423)
Platyrrhini	ANCESTRAL SPECIES		ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.a	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b.v #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Cebidae	ANCESTRAL SPECIES	1	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000163565	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.a	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b.v #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Cebidae_a	ANCESTRAL SPECIES		ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000163565	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.a	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b.v #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Capuchin	MODERN SPECIES	15	MFN2 (ENSCCAG00000026866)	MIIP (ENSCCAG00000026110)	TNFRSF8 (ENSCCAG00000037813)	TNFRSF1B (ENSCCAG00000020210)	VPS13D (ENSCCAG00000037026)	ENSCCAG00000032853	DHRS3 (ENSCCAG00000019005)	AADACL4 (ENSCCAG00000031095)	AADACL3 (ENSCCAG00000015991)	CFAP107 (ENSCCAG00000023379)	ENSCCAG00000032669	ENSCCAG00000034267	LRRC38 (ENSCCAG00000016310) #19	PDPN (ENSCCAG00000021068) #20	PRDM2 (ENSCCAG00000025776) #21	KAZN (ENSCCAG00000023463) #22	ENSCCAG00000025007	ENSCCAG00000037569	TMEM51 (ENSCCAG00000033420) #23	FHAD1 (ENSCCAG00000035375) #24	EFHD2 (ENSCCAG00000019849) #25	CTRC (ENSCCAG00000037721)	ENSCCAG00000025250 #26	CASP9 (ENSCCAG00000020237) #27	DNAJC16 (ENSCCAG00000022839) #28	ENSCCAG00000034120	AGMAT (ENSCCAG00000030030) #29	DDI2 (ENSCCAG00000036965) #30	PLEKHM2 (ENSCCAG00000028587) #31	SLC25A34 (ENSCCAG00000030859) #32	TMEM82 (ENSCCAG00000019233) #33
Bolivian squirrel monkey	MODERN SPECIES	110													LRRC38 (ENSSBOG00000033893) #19	ENSSBOG00000028333 #20	PRDM2 (ENSSBOG00000018480) #21	KAZN (ENSSBOG00000033671) #22	TMEM51 (ENSSBOG00000033958) #23	FHAD1 (ENSSBOG00000000586) #24	EFHD2 (ENSSBOG00000032949) #25	CTRC (ENSSBOG00000025369)	ENSSBOG00000030351 #26	CASP9 (ENSSBOG00000009264) #27	ENSSBOG00000024838	DNAJC16 (ENSSBOG00000035624) #28	AGMAT (ENSSBOG00000034495) #29	RSC1A1 (ENSSBOG00000032268)	PLEKHM2 (ENSSBOG00000033401) #31	SLC25A34 (ENSSBOG00000029337) #32	TMEM82 (ENSSBOG00000026126) #33	FBLIM1 (ENSSBOG00000019159) #34	SPEN (ENSSBOG00000028770)
Mas night monkey	MODERN SPECIES	1281											LRRC38 (ENSANAG00000026363) #19	PDPN (ENSANAG00000031735) #20	PRDM2 (ENSANAG00000035735) #21	ENSANAG00000028761	ENSANAG00000027957	ENSANAG00000021055 #22	TMEM51 (ENSANAG00000029829) #23	FHAD1 (ENSANAG00000032478) #24	EFHD2 (ENSANAG00000038054) #25	CTRC (ENSANAG00000038501)	ENSANAG00000007520 #26	CASP9 (ENSANAG00000034956) #27	ENSANAG00000036452	DNAJC16 (ENSANAG00000026140) #28	AGMAT (ENSANAG00000026751) #29	RSC1A1 (ENSANAG00000030823)	PLEKHM2 (ENSANAG00000037103) #31	SLC25A34 (ENSANAG00000036756) #32	TMEM82 (ENSANAG00000026990) #33	FBLIM1 (ENSANAG00000032942) #34	SPEN (ENSANAG00000034428)
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.f.b	ENSGT01030000234531.A.b.b.b.b.b.e.b.b	ENSGT01030000234531.A.b.b.b.a.e	ENSGT01030000234531.A.b.b.b.b.b.f.a	ENSGT01030000234531.A.b.b.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.a.f	ENSGT00940000162571 #19	ENSGT00950000183107.a.b.a.tb.a	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a.pb #26	ENSGT01030000234528.B.a.a.qb #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a.e	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.b	ENSGT01030000234531.A.b.b.b.a.e.a	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b	ENSGT01030000234531.A.b.b.b.a.e.b	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.a	ENSGT01030000234531.A.b.b.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.a.f	ENSGT00940000162571 #19	ENSGT00950000183107.a.b.a.tb.a	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a.pb #26	ENSGT01030000234528.B.a.a.qb #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003.f #34
Hominidae	ANCESTRAL SPECIES	3	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a.e	ENSGT01030000234531.A.b.b.b.b.b.f.b	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.a	ENSGT01030000234531.A.b.b.b.b.a.f	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.a	ENSGT01030000234531.A.b.b.b.a.e.b.b	ENSGT01030000234531.A.b.b.b.b.b.f.a.b	ENSGT01030000234531.A.b.b.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b	ENSGT01030000234531.A.b.b.b.a.f	ENSGT00940000162571 #19	ENSGT00950000183107.a.b.a.tb.a	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a.pb #26	ENSGT01030000234528.B.a.a.qb #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003.f #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a.e	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.b	ENSGT01030000234531.A.b.b.b.a.e.a	ENSGT00940000153402.c.b.a.b.a.a	ENSGT01030000234531.A.b.b.b.a.e.b.b.c	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.b.b.e.a.b	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b	ENSGT01030000234531.A.b.b.b.a.f	ENSGT00940000162571 #19	ENSGT00950000183107.a.b.a.tb.a	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000009710.p.a	ENSGT00940000154570.b #22	ENSGT00940000167437.a	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a.pb #26	ENSGT01030000234528.B.a.a.qb #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a.e	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.b	ENSGT01030000234531.A.b.b.b.a.e.a	ENSGT00940000153402.c.b.a.b.a.a.d	ENSGT01030000234531.A.b.b.b.a.e.b.b.c	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.b.b.e.a.b	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b	ENSGT01030000234531.A.b.b.b.a.f	ENSGT00940000162571 #19	ENSGT00950000183107.a.b.a.tb.a	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000009710.p.a	ENSGT00940000154570.b #22	ENSGT00940000167437.a	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a.pb #26	ENSGT01030000234528.B.a.a.qb #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32
Pan	ANCESTRAL SPECIES		ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a.e	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.b	ENSGT01030000234531.A.b.b.b.a.e.a	ENSGT01030000234531.A.b.b.b.b.b.f.a.b	ENSGT01030000234531.A.b.b.b.b.b.e.a.b	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b	ENSGT01030000234531.A.b.b.b.a.f	ENSGT00940000162571 #19	ENSGT00950000183107.a.b.a.tb.a	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000009710.p.a	ENSGT00940000154570.b #22	ENSGT00940000167437.a	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a.pb #26	ENSGT01030000234528.B.a.a.qb #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32
Chimpanzee	MODERN SPECIES		AADACL4 (ENSPTRG00000030826)	AADACL3 (ENSPTRG00000000168)	CFAP107 (ENSPTRG00000000170)	PRAMEF12 (ENSPTRG00000030821)	ENSPTRG00000031360	ENSPTRG00000030818	ENSPTRG00000030823	ENSPTRG00000030824	PRAMEF19 (ENSPTRG00000030819)	PRAMEF17 (ENSPTRG00000030820)	PRAMEF20 (ENSPTRG00000041322)	LRRC38 (ENSPTRG00000000182) #19	ENSPTRG00000042868	PDPN (ENSPTRG00000000184) #20	PRDM2 (ENSPTRG00000000185) #21	KAZN (ENSPTRG00000000186) #22	ENSPTRG00000049061	ENSPTRG00000030816	ENSPTRG00000048250	TMEM51 (ENSPTRG00000000193) #23	FHAD1 (ENSPTRG00000000194) #24	EFHD2 (ENSPTRG00000050778) #25	CTRC (ENSPTRG00000000197)	CELA2A (ENSPTRG00000034262) #26	CELA2B (ENSPTRG00000049760) #26	CASP9 (ENSPTRG00000000200) #27	DNAJC16 (ENSPTRG00000000201) #28	AGMAT (ENSPTRG00000000202) #29	DDI2 (ENSPTRG00000024059) #30	PLEKHM2 (ENSPTRG00000000205) #31	SLC25A34 (ENSPTRG00000000206) #32
Bonobo	MODERN SPECIES		TNFRSF8 (ENSPPAG00000033492)	TNFRSF1B (ENSPPAG00000033471)	VPS13D (ENSPPAG00000033746)	DHRS3 (ENSPPAG00000043366)	ENSPPAG00000043843	CFAP107 (ENSPPAG00000033402)	PRAMEF12 (ENSPPAG00000038324)	ENSPPAG00000030003	ENSPPAG00000013902	PRAMEF17 (ENSPPAG00000027375)	PRAMEF20 (ENSPPAG00000034456)	LRRC38 (ENSPPAG00000027892) #19	ENSPPAG00000030116	ENSPPAG00000039265 #20	PRDM2 (ENSPPAG00000036677) #21	KAZN (ENSPPAG00000007694) #22	ENSPPAG00000030734	ENSPPAG00000009276	TMEM51 (ENSPPAG00000027626) #23	FHAD1 (ENSPPAG00000013425) #24	EFHD2 (ENSPPAG00000029402) #25	CTRC (ENSPPAG00000033889)	CELA2A (ENSPPAG00000030039) #26	CELA2B (ENSPPAG00000041434) #26	CASP9 (ENSPPAG00000043312) #27	DNAJC16 (ENSPPAG00000038752) #28	AGMAT (ENSPPAG00000027720) #29	DDI2 (ENSPPAG00000038331) #30	RSC1A1 (ENSPPAG00000024018)	PLEKHM2 (ENSPPAG00000036158) #31	SLC25A34 (ENSPPAG00000042365) #32
Human	MODERN SPECIES		HNRNPCL4 (ENSG00000179412)	PRAMEF9 (ENSG00000204505)	PRAMEF13 (ENSG00000279169)	PRAMEF18 (ENSG00000279804)	PRAMEF5 (ENSG00000270601)	PRAMEF8 (ENSG00000182330)	PRAMEF33 (ENSG00000237700)	PRAMEF15 (ENSG00000204501)	PRAMEF14 (ENSG00000204481)	PRAMEF19 (ENSG00000204480)	PRAMEF17 (ENSG00000204479)	PRAMEF20 (ENSG00000204478)	LRRC38 (ENSG00000162494) #19	PDPN (ENSG00000162493) #20	PRDM2 (ENSG00000116731) #21	KAZN (ENSG00000189337) #22	TMEM51 (ENSG00000171729) #23	FHAD1 (ENSG00000142621) #24	EFHD2 (ENSG00000142634) #25	CTRC (ENSG00000162438)	CELA2A (ENSG00000142615) #26	CELA2B (ENSG00000215704) #26	CASP9 (ENSG00000132906) #27	DNAJC16 (ENSG00000116138) #28	AGMAT (ENSG00000116771) #29	DDI2 (ENSG00000197312) #30	RSC1A1 (ENSG00000215695)	PLEKHM2 (ENSG00000116786) #31	SLC25A34 (ENSG00000162461) #32	TMEM82 (ENSG00000162460) #33	FBLIM1 (ENSG00000162458) #34
Gorilla	MODERN SPECIES		ENSGGOG00000024298	ENSGGOG00000009211	ENSGGOG00000002008	ENSGGOG00000023201	PRAMEF18 (ENSGGOG00000027485)	ENSGGOG00000040856	ENSGGOG00000001999	ENSGGOG00000025050	ENSGGOG00000027127	PRAMEF17 (ENSGGOG00000002014)	ENSGGOG00000023851	LRRC38 (ENSGGOG00000003598) #19	ENSGGOG00000006226	ENSGGOG00000010242 #20	PRDM2 (ENSGGOG00000005678) #21	KAZN (ENSGGOG00000013613) #22	ENSGGOG00000038135	ENSGGOG00000007474	TMEM51 (ENSGGOG00000028096) #23	FHAD1 (ENSGGOG00000000691) #24	EFHD2 (ENSGGOG00000006667) #25	CTRC (ENSGGOG00000006673)	CELA2A (ENSGGOG00000013964) #26	CELA2B (ENSGGOG00000036765) #26	CASP9 (ENSGGOG00000001961) #27	DNAJC16 (ENSGGOG00000002611) #28	AGMAT (ENSGGOG00000015172) #29	ENSGGOG00000028428	DDI2 (ENSGGOG00000013537) #30	PLEKHM2 (ENSGGOG00000015173) #31	SLC25A34 (ENSGGOG00000015182) #32
Orangutan	MODERN SPECIES		ENSPPYG00000032923	ENSPPYG00000041518	ENSPPYG00000037430	ENSPPYG00000040014	ENSPPYG00000036925	ENSPPYG00000038915	ENSPPYG00000030931	ENSPPYG00000031128	ENSPPYG00000001860	ENSPPYG00000035652	ENSPPYG00000030098	LRRC38 (ENSPPYG00000010676) #19	ENSPPYG00000001857	ENSPPYG00000001856 #20	PRDM2 (ENSPPYG00000001855) #21	KAZN (ENSPPYG00000001854) #22	ENSPPYG00000001850 #23	FHAD1 (ENSPPYG00000001848) #24	EFHD2 (ENSPPYG00000036146) #25	CTRC (ENSPPYG00000001846)	CELA2A (ENSPPYG00000034416) #26	ENSPPYG00000010674 #26	CELA2B (ENSPPYG00000001845) #26	CASP9 (ENSPPYG00000001844) #27	DNAJC16 (ENSPPYG00000001843) #28	AGMAT (ENSPPYG00000001842) #29	DDI2 (ENSPPYG00000001841) #30	RSC1A1 (ENSPPYG00000031265)	PLEKHM2 (ENSPPYG00000001840) #31	SLC25A34 (ENSPPYG00000037176) #32	TMEM82 (ENSPPYG00000001838) #33
Gibbon	MODERN SPECIES	16	CFAP107 (ENSNLEG00000009848)	ENSNLEG00000033314	ENSNLEG00000030346	ENSNLEG00000009851	ENSNLEG00000031836	ENSNLEG00000036088	ENSNLEG00000009861	ENSNLEG00000009866	ENSNLEG00000009870	ENSNLEG00000009879	PRAMEF20 (ENSNLEG00000009881)	LRRC38 (ENSNLEG00000009883) #19	ENSNLEG00000032775	ENSNLEG00000036224 #20	PRDM2 (ENSNLEG00000009887) #21	KAZN (ENSNLEG00000007579) #22	ENSNLEG00000009890	ENSNLEG00000032060	TMEM51 (ENSNLEG00000007586) #23	FHAD1 (ENSNLEG00000007592) #24	EFHD2 (ENSNLEG00000007602) #25	CTRC (ENSNLEG00000007606)	CELA2A (ENSNLEG00000026921) #26	CELA2B (ENSNLEG00000007611) #26	CASP9 (ENSNLEG00000007614) #27	DNAJC16 (ENSNLEG00000007619) #28	AGMAT (ENSNLEG00000007628) #29	DDI2 (ENSNLEG00000018559) #30	PLEKHM2 (ENSNLEG00000007636) #31	SLC25A34 (ENSNLEG00000007644) #32	TMEM82 (ENSNLEG00000007645) #33
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.f.b	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c	ENSGT00940000153402.c.b.a.b.a.a	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d	ENSGT01030000234531.A.b.b.b.a.e	ENSGT01030000234531.A.b.b.b.b.b.f.a	ENSGT01030000234531.A.b.b.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.a.f	ENSGT00940000163979	ENSGT00940000162571 #19	ENSGT00950000183107.a.b.a.tb.a	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a.pb.c #26	ENSGT01030000234528.B.a.a.qb #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33
Rhinopithecus	ANCESTRAL SPECIES	936															ENSGT00940000159410 #21	ENSGT00940000154570.b #22
Black snub-nosed monkey	MODERN SPECIES	1975															PRDM2 (ENSRBIG00000030596) #21	KAZN (ENSRBIG00000034054) #22
Golden snub-nosed monkey	MODERN SPECIES	2071															PRDM2 (ENSRROG00000041096) #21	KAZN (ENSRROG00000031681) #22
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.f.b	ENSGT01030000234531.A.b.b.b.a.e.d	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d	ENSGT01030000234531.A.b.b.b.a.e.c	ENSGT01030000234531.A.b.b.b.b.b.f.a	ENSGT01030000234531.A.b.b.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.a.f	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b.d	ENSGT01030000234528.B.a.a.pb.d.b.b #26	ENSGT00940000153216.a.b.c	ENSGT01030000234528.B.a.a.pb.c #26	ENSGT01030000234528.B.a.a.qb #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31
Vervet Monkey	MODERN SPECIES	12	DHRS3 (ENSCSAG00000000811)	ENSCSAG00000000812	AADACL3 (ENSCSAG00000000813)	CFAP107 (ENSCSAG00000000814)	PRAMEF12 (ENSCSAG00000000815)	ENSCSAG00000000637	ENSCSAG00000000816	ENSCSAG00000000817	ENSCSAG00000000818	ENSCSAG00000000819	ENSCSAG00000000820	PRAMEF20 (ENSCSAG00000000821)	LRRC38 (ENSCSAG00000000822) #19	PDPN (ENSCSAG00000000823) #20	PRDM2 (ENSCSAG00000000824) #21	KAZN (ENSCSAG00000000825) #22	TMEM51 (ENSCSAG00000000827) #23	ENSCSAG00000000828 #24	FHAD1 (ENSCSAG00000000829) #24	EFHD2 (ENSCSAG00000000830) #25	CTRC (ENSCSAG00000000831)	CELA2B (ENSCSAG00000000832) #26	CASP9 (ENSCSAG00000000833) #27	DNAJC16 (ENSCSAG00000000834) #28	AGMAT (ENSCSAG00000000835) #29	RSC1A1 (ENSCSAG00000000836)	PLEKHM2 (ENSCSAG00000000837) #31	SLC25A34 (ENSCSAG00000000838) #32	TMEM82 (ENSCSAG00000000839) #33	FBLIM1 (ENSCSAG00000000840) #34	SPEN (ENSCSAG00000000841)
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.f.b	ENSGT01030000234531.A.b.b.b.a.e.d	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d	ENSGT01030000234531.A.b.b.b.a.e.c	ENSGT01030000234531.A.b.b.b.b.b.f.a	ENSGT01030000234531.A.b.b.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.a.f	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b.d	ENSGT01030000234528.B.a.a.pb.d.b.b #26	ENSGT00940000153216.a.b.c	ENSGT01030000234528.B.a.a.pb.c #26	ENSGT01030000234528.B.a.a.qb #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31
Macaca	ANCESTRAL SPECIES		ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.f.b	ENSGT01030000234531.A.b.b.b.a.e.d	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d	ENSGT01030000234531.A.b.b.b.a.e.c	ENSGT01030000234531.A.b.b.b.b.b.f.a	ENSGT01030000234531.A.b.b.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.a.f	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b.d	ENSGT01030000234528.B.a.a.pb.d.b.b #26	ENSGT00940000153216.a.b.c	ENSGT01030000234528.B.a.a.pb.c #26	ENSGT01030000234528.B.a.a.qb #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32
Pig-tailed macaque	MODERN SPECIES	508	DHRS3 (ENSMNEG00000035781)	AADACL4 (ENSMNEG00000044859)	AADACL3 (ENSMNEG00000034202)	CFAP107 (ENSMNEG00000039150)	PRAMEF12 (ENSMNEG00000029190)	ENSMNEG00000035213	ENSMNEG00000039998	ENSMNEG00000029126	ENSMNEG00000030236	ENSMNEG00000033443	ENSMNEG00000041850	PRAMEF20 (ENSMNEG00000043597)	LRRC38 (ENSMNEG00000043446) #19	PDPN (ENSMNEG00000043777) #20	PRDM2 (ENSMNEG00000039705) #21	KAZN (ENSMNEG00000038651) #22	ENSMNEG00000027989	TMEM51 (ENSMNEG00000030790) #23	FHAD1 (ENSMNEG00000045473) #24	EFHD2 (ENSMNEG00000029503) #25	CTRC (ENSMNEG00000029283)	ENSMNEG00000033814 #26	ENSMNEG00000034527 #26	CELA2B (ENSMNEG00000035015) #26	CASP9 (ENSMNEG00000032453) #27	DNAJC16 (ENSMNEG00000015068) #28	AGMAT (ENSMNEG00000038882) #29	RSC1A1 (ENSMNEG00000027911)	PLEKHM2 (ENSMNEG00000027232) #31	SLC25A34 (ENSMNEG00000029592) #32	TMEM82 (ENSMNEG00000044140) #33
Macaca_a	ANCESTRAL SPECIES		ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.f.b	ENSGT01030000234531.A.b.b.b.a.e.d	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d	ENSGT01030000234531.A.b.b.b.a.e.c	ENSGT01030000234531.A.b.b.b.b.b.f.a	ENSGT01030000234531.A.b.b.b.b.b.e.a	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT01100000263493.a.b.b.a.a.a.a.a.b	ENSGT01100000263493.a.b.a.b.a.a.b.a.b.b.b.a.b.a.b	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.b.a	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b.c	ENSGT01030000234528.B.a.a.pb.c #26	ENSGT01030000234528.B.a.a.qb #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34
Rhesus	MODERN SPECIES		CFAP107 (ENSMMUG00000021870)	PRAMEF12 (ENSMMUG00000056436)	ENSMMUG00000057550	ENSMMUG00000054309	ENSMMUG00000055233	ENSMMUG00000056227	ENSMMUG00000058440	ENSMMUG00000054892	ENSMMUG00000058407	LRRC38 (ENSMMUG00000053824) #19	PDPN (ENSMMUG00000000145) #20	PRDM2 (ENSMMUG00000017040) #21	ENSMMUG00000050642	ENSMMUG00000059275	ENSMMUG00000059157	KAZN (ENSMMUG00000023070) #22	TMEM51 (ENSMMUG00000006164) #23	FHAD1 (ENSMMUG00000003987) #24	ENSMMUG00000053235	EFHD2 (ENSMMUG00000050246) #25	ENSMMUG00000058742	ENSMMUG00000060541	ENSMMUG00000053550 #26	ENSMMUG00000064552 #26	CELA2B (ENSMMUG00000031821) #26	CASP9 (ENSMMUG00000018163) #27	DNAJC16 (ENSMMUG00000032244) #28	AGMAT (ENSMMUG00000002802) #29	RSC1A1 (ENSMMUG00000019912)	PLEKHM2 (ENSMMUG00000016281) #31	SLC25A34 (ENSMMUG00000060152) #32
Crab-eating macaque	DUPLICATION
Crab-eating macaque	MODERN SPECIES		ENSMFAG00000064937	ENSMFAG00000051805	ENSMFAG00000003419	ENSMFAG00000032967	ENSMFAG00000042798	PRAMEF20 (ENSMFAG00000037490)	ENSMFAG00000065006	ENSMFAG00000035413	PDPN (ENSMFAG00000001482) #20	ENSMFAG00000037989 #21	ENSMFAG00000060287	ENSMFAG00000061860	ENSMFAG00000053475	ENSMFAG00000060810	ENSMFAG00000033310 #22	ENSMFAG00000050473 #22	TMEM51 (ENSMFAG00000031613) #23	ENSMFAG00000030840 #24	ENSMFAG00000044896 #25	ENSMFAG00000058946	CELA2B (ENSMFAG00000034080) #26	CASP9 (ENSMFAG00000044632) #27	DNAJC16 (ENSMFAG00000036417) #28	AGMAT (ENSMFAG00000055350) #29	RSC1A1 (ENSMFAG00000040011)	PLEKHM2 (ENSMFAG00000044082) #31	SLC25A34 (ENSMFAG00000060774) #32	ENSMFAG00000055220	TMEM82 (ENSMFAG00000044352) #33	FBLIM1 (ENSMFAG00000044716) #34	ENSMFAG00000044321
Crab-eating macaque	MODERN SPECIES		ENSMFAG00000037280	ENSMFAG00000064937	ENSMFAG00000051805	ENSMFAG00000003419	ENSMFAG00000032967	ENSMFAG00000042798	PRAMEF20 (ENSMFAG00000037490)	ENSMFAG00000065006	ENSMFAG00000035413	PDPN (ENSMFAG00000001482) #20	ENSMFAG00000037989 #21	ENSMFAG00000060287	ENSMFAG00000061860	ENSMFAG00000053475	ENSMFAG00000060810	ENSMFAG00000033310 #22	ENSMFAG00000050473 #22	TMEM51 (ENSMFAG00000031613) #23	ENSMFAG00000030840 #24	ENSMFAG00000044896 #25	ENSMFAG00000058946	CELA2B (ENSMFAG00000034080) #26	CASP9 (ENSMFAG00000044632) #27	DNAJC16 (ENSMFAG00000036417) #28	AGMAT (ENSMFAG00000055350) #29	RSC1A1 (ENSMFAG00000040011)	PLEKHM2 (ENSMFAG00000044082) #31	SLC25A34 (ENSMFAG00000060774) #32	ENSMFAG00000055220	TMEM82 (ENSMFAG00000044352) #33	FBLIM1 (ENSMFAG00000044716) #34
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.f.b	ENSGT01030000234531.A.b.b.b.a.e.d	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d	ENSGT01030000234531.A.b.b.b.a.e.c	ENSGT01030000234531.A.b.b.b.b.b.f.a	ENSGT01030000234531.A.b.b.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.a.f	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b.d	ENSGT01030000234528.B.a.a.qb #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Olive baboon	MODERN SPECIES		MIIP (ENSPANG00000014730)	TNFRSF8 (ENSPANG00000007874)	TNFRSF1B (ENSPANG00000006627)	VPS13D (ENSPANG00000008050)	DHRS3 (ENSPANG00000013326)	AADACL4 (ENSPANG00000009070)	AADACL3 (ENSPANG00000000763)	CFAP107 (ENSPANG00000013325)	ENSPANG00000032026	ENSPANG00000019717	ENSPANG00000008813	ENSPANG00000013765	LRRC38 (ENSPANG00000050121) #19	PDPN (ENSPANG00000009068) #20	PRDM2 (ENSPANG00000007508) #21	KAZN (ENSPANG00000005382) #22	ENSPANG00000040374	ENSPANG00000045260 #23	ENSPANG00000019569 #24	EFHD2 (ENSPANG00000021488) #25	CELA2B (ENSPANG00000015026) #26	CASP9 (ENSPANG00000001073) #27	DNAJC16 (ENSPANG00000015571) #28	AGMAT (ENSPANG00000019715) #29	DDI2 (ENSPANG00000015838) #30	RSC1A1 (ENSPANG00000041977)	PLEKHM2 (ENSPANG00000012689) #31	SLC25A34 (ENSPANG00000020306) #32	TMEM82 (ENSPANG00000018591) #33	FBLIM1 (ENSPANG00000019414) #34	SPEN (ENSPANG00000006293)
Cercopithecinae_d	ANCESTRAL SPECIES	42	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.a.e.c	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c	ENSGT01030000234531.A.b.b.b.a.e.d	ENSGT01030000234531.A.b.b.b.b.b.f.b	ENSGT01030000234531.A.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.f.a	ENSGT01030000234531.A.b.b.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.a.f	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b.d	ENSGT00940000153216.a.b.c	ENSGT01030000234528.B.a.a.pb.d.b.a #26
Sooty mangabey	MODERN SPECIES	207				ENSCATG00000032922	ENSCATG00000015317	ENSCATG00000024574	ENSCATG00000030660	ENSCATG00000031710	ENSCATG00000037206	ENSCATG00000038414	ENSCATG00000034140	PRAMEF20 (ENSCATG00000022537)	LRRC38 (ENSCATG00000035670) #19	PDPN (ENSCATG00000039975) #20	PRDM2 (ENSCATG00000029261) #21	KAZN (ENSCATG00000039305) #22	TMEM51 (ENSCATG00000032156) #23	FHAD1 (ENSCATG00000034677) #24	EFHD2 (ENSCATG00000010218) #25	ENSCATG00000031108	ENSCATG00000032298	ENSCATG00000034453 #26	ENSCATG00000028825 #26
Drill	MODERN SPECIES	1510																KAZN (ENSMLEG00000023176) #22	TMEM51 (ENSMLEG00000036022) #23	FHAD1 (ENSMLEG00000039315) #24	EFHD2 (ENSMLEG00000000134) #25	ENSMLEG00000032088	ENSMLEG00000033462	CELA2A (ENSMLEG00000036762) #26
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Eulipotyphla	ANCESTRAL SPECIES	2573																ENSGT00940000154570.b #22	ENSGT00400000022892
Hedgehog	MODERN SPECIES	8037																ENSEEUG00000015196 #22
Common shrew	MODERN SPECIES	6313																ENSSARG00000009702 #22	ENSSARG00000009715
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Artiodactyla	ANCESTRAL SPECIES		ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b.d	ENSGT01030000234531.A.b.b.b.i.b	ENSGT01030000234531.A.b.b.b.i.a.b.c	ENSGT01030000234531.A.b.b.b.i.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Pecora	ANCESTRAL SPECIES	22					ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.j	ENSGT01030000234531.A.b.b.b.i.a.b.d	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Percora_a	ANCESTRAL SPECIES	15	ENSGT00550000074794.k.b	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.j	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.b.d	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Bovidae	ANCESTRAL SPECIES	15	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.b	ENSGT01030000234531.A.b.b.b.i.a.b.c.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.b.d	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Bovinae	ANCESTRAL SPECIES	12	ENSGT01030000234531.A.b.b.b.i.a.b.c.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a	ENSGT01030000234531.A.b.b.b.i.a.b.d	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Bos	ANCESTRAL SPECIES	12	ENSGT01030000234531.A.b.b.b.i.a.b.c.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a	ENSGT01030000234531.A.b.b.b.i.a.b.d.d	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003.d #34	ENSGT00940000154141.B.t.b	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.b
Bos_a	ANCESTRAL SPECIES	8	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.b	ENSGT01030000234531.A.b.b.b.i.a.b.c.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a	ENSGT01030000234531.A.b.b.b.i.a.b.d.d	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003.d #34	ENSGT00940000154141.B.t.b	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.b
Wild yak	MODERN SPECIES	185														ENSBMUG00000025697 #21	ENSBMUG00000025687	KAZN (ENSBMUG00000025682) #22	TMEM51 (ENSBMUG00000025671) #23	FHAD1 (ENSBMUG00000025658) #24	EFHD2 (ENSBMUG00000025629) #25	CTRC (ENSBMUG00000025619)	ENSBMUG00000025605 #26	CASP9 (ENSBMUG00000025595) #27	DNAJC16 (ENSBMUG00000025587) #28	AGMAT (ENSBMUG00000025575) #29	ENSBMUG00000025563	PLEKHM2 (ENSBMUG00000025554) #31	SLC25A34 (ENSBMUG00000025524) #32	TMEM82 (ENSBMUG00000025518) #33	FBLIM1 (ENSBMUG00000025515) #34	SPEN (ENSBMUG00000025507)	ZBTB17 (ENSBMUG00000025489) #36
Domestic yak	MODERN SPECIES	5	ENSBGRG00000021633	ENSBGRG00000021586	ENSBGRG00000021556	ENSBGRG00000021508	ENSBGRG00000021485	ENSBGRG00000021466	ENSBGRG00000021449	ENSBGRG00000021430	ENSBGRG00000021379	ENSBGRG00000021323	ENSBGRG00000021291	LRRC38 (ENSBGRG00000021255) #19	ENSBGRG00000021152 #20	PRDM2 (ENSBGRG00000020945) #21	ENSBGRG00000020912	KAZN (ENSBGRG00000020603) #22	TMEM51 (ENSBGRG00000020549) #23	FHAD1 (ENSBGRG00000020058) #24	EFHD2 (ENSBGRG00000020005) #25	CTRC (ENSBGRG00000019947)	ENSBGRG00000019856 #26	CASP9 (ENSBGRG00000019581) #27	DNAJC16 (ENSBGRG00000019367) #28	AGMAT (ENSBGRG00000019283) #29	ENSBGRG00000019177	PLEKHM2 (ENSBGRG00000019013) #31	SLC25A34 (ENSBGRG00000018908) #32	TMEM82 (ENSBGRG00000018870) #33	ENSBGRG00000018722 #34	ENSBGRG00000018679	ENSBGRG00000018650
Bos_b	ANCESTRAL SPECIES	27	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.b	ENSGT01030000234531.A.b.b.b.i.a.b.c.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.b.d.d	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003.d #34	ENSGT00940000154141.B.t.b	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.b	ENSGT00940000157087.a.b
Cow	DUPLICATION
Cow	MODERN SPECIES	7	ENSBTAG00000050338	ENSBTAG00000051639	ENSBTAG00000054788	ENSBTAG00000031507	ENSBTAG00000053200	ENSBTAG00000054475	ENSBTAG00000046630	ENSBTAG00000051014	ENSBTAG00000054147	ENSBTAG00000050422	ENSBTAG00000024791	LRRC38 (ENSBTAG00000017883) #19	PDPN (ENSBTAG00000001788) #20	PRDM2 (ENSBTAG00000020552) #21	ENSBTAG00000050764 ##22	ENSBTAG00000054228 #22	KAZN (ENSBTAG00000015606) #22	TMEM51 (ENSBTAG00000005300) #23	FHAD1 (ENSBTAG00000002408) #24	EFHD2 (ENSBTAG00000009048) #25	CTRC (ENSBTAG00000024497) #26	CELA2A (ENSBTAG00000024496) #26	CASP9 (ENSBTAG00000002472) #27	DNAJC16 (ENSBTAG00000002476) #28	AGMAT (ENSBTAG00000002478) #29	ENSBTAG00000039662	PLEKHM2 (ENSBTAG00000018722) #31	SLC25A34 (ENSBTAG00000018723) #32	TMEM82 (ENSBTAG00000018724) #33	FBLIM1 (ENSBTAG00000018725) #34	SPEN (ENSBTAG00000018729)
Cow	MODERN SPECIES	7	ENSBTAG00000051639	ENSBTAG00000054788	ENSBTAG00000031507	ENSBTAG00000053200	ENSBTAG00000054475	ENSBTAG00000046630	ENSBTAG00000051014	ENSBTAG00000054147	ENSBTAG00000050422	ENSBTAG00000024791	LRRC38 (ENSBTAG00000017883) #19	PDPN (ENSBTAG00000001788) #20	PRDM2 (ENSBTAG00000020552) #21	ENSBTAG00000050764 ##22	ENSBTAG00000054228 #22	KAZN (ENSBTAG00000015606) #22	TMEM51 (ENSBTAG00000005300) #23	FHAD1 (ENSBTAG00000002408) #24	EFHD2 (ENSBTAG00000009048) #25	CTRC (ENSBTAG00000024497) #26	CELA2A (ENSBTAG00000024496) #26	CASP9 (ENSBTAG00000002472) #27	DNAJC16 (ENSBTAG00000002476) #28	AGMAT (ENSBTAG00000002478) #29	ENSBTAG00000039662	PLEKHM2 (ENSBTAG00000018722) #31	SLC25A34 (ENSBTAG00000018723) #32	TMEM82 (ENSBTAG00000018724) #33	FBLIM1 (ENSBTAG00000018725) #34	SPEN (ENSBTAG00000018729)	ZBTB17 (ENSBTAG00000018730) #36
Hybrid Bos Indicus	MODERN SPECIES	7	ENSBIXG00005008982	ENSBIXG00005009342	ENSBIXG00005007254	ENSBIXG00005009912	ENSBIXG00005006987	ENSBIXG00005010103	ENSBIXG00005000864	ENSBIXG00005000883	ENSBIXG00005010457	ENSBIXG00005010530	ENSBIXG00005006420	LRRC38 (ENSBIXG00005000595) #19	ENSBIXG00005000979 #20	PRDM2 (ENSBIXG00005007097) #21	ENSBIXG00005005375	KAZN (ENSBIXG00005011261) #22	TMEM51 (ENSBIXG00005011327) #23	FHAD1 (ENSBIXG00005011647) #24	EFHD2 (ENSBIXG00005011720) #25	ENSBIXG00005011756 #26	ENSBIXG00005005955 #26	CASP9 (ENSBIXG00005005479) #27	DNAJC16 (ENSBIXG00005001178) #28	AGMAT (ENSBIXG00005000434) #29	ENSBIXG00005011928	PLEKHM2 (ENSBIXG00005012000) #31	SLC25A34 (ENSBIXG00005012016) #32	TMEM82 (ENSBIXG00005012046) #33	FBLIM1 (ENSBIXG00005012085) #34	ENSBIXG00005012103	ENSBIXG00005012123
American bison	MODERN SPECIES	3204	ENSBBBG00000001187	ENSBBBG00000000878	ENSBBBG00000003594	ENSBBBG00000006952	ENSBBBG00000003702	ENSBBBG00000003719	ENSBBBG00000015055	ENSBBBG00000015074	ENSBBBG00000015138	ENSBBBG00000015151	ENSBBBG00000003551	ENSBBBG00000015198	LRRC38 (ENSBBBG00000015206) #19	ENSBBBG00000015215 #20	PRDM2 (ENSBBBG00000015229) #21	KAZN (ENSBBBG00000015286) #22	TMEM51 (ENSBBBG00000015300) #23	FHAD1 (ENSBBBG00000001305) #24	EFHD2 (ENSBBBG00000001289) #25	ENSBBBG00000001259 #26	ENSBBBG00000003506 #26	CASP9 (ENSBBBG00000003489) #27	DNAJC16 (ENSBBBG00000015369) #28	AGMAT (ENSBBBG00000015382) #29	DDI2 (ENSBBBG00000003839) #30	RSC1A1 (ENSBBBG00000015392)	PLEKHM2 (ENSBBBG00000003857) #31	SLC25A34 (ENSBBBG00000015510) #32	TMEM82 (ENSBBBG00000007137) #33	FBLIM1 (ENSBBBG00000015556) #34	ENSBBBG00000015562
Caprinae	ANCESTRAL SPECIES	12	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.b.d	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.b	ENSGT01030000234531.A.b.b.b.i.a.b.c.b.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a.h	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Rambouillet Sheep	MODERN SPECIES	3	ENSOARG00020010409	ENSOARG00020010369	ENSOARG00020010311	ENSOARG00020010268	ENSOARG00020009699	ENSOARG00020009442	ENSOARG00020009412	ENSOARG00020009341	ENSOARG00020009285	ENSOARG00020009198	ENSOARG00020020120	LRRC38 (ENSOARG00020020097) #19	PDPN (ENSOARG00020020058) #20	PRDM2 (ENSOARG00020019392) #21	ENSOARG00020019315	KAZN (ENSOARG00020018607) #22	TMEM51 (ENSOARG00020018527) #23	FHAD1 (ENSOARG00020018014) #24	EFHD2 (ENSOARG00020017962) #25	CTRC (ENSOARG00020017905)	ENSOARG00020017822 #26	CASP9 (ENSOARG00020017778) #27	DNAJC16 (ENSOARG00020017433) #28	AGMAT (ENSOARG00020017341) #29	PLEKHM2 (ENSOARG00020016680) #31	SLC25A34 (ENSOARG00020016601) #32	TMEM82 (ENSOARG00020016514) #33	FBLIM1 (ENSOARG00020016382) #34	SPEN (ENSOARG00020016226)	ZBTB17 (ENSOARG00020015851) #36	SAMD11 (ENSOARG00020015279)
Goat	MODERN SPECIES	7	ENSCHIG00000016311	AADACL3 (ENSCHIG00000019769)	CFAP107 (ENSCHIG00000011019)	ENSCHIG00000020333	ENSCHIG00000014888	ENSCHIG00000008224	ENSCHIG00000020507	ENSCHIG00000014501	ENSCHIG00000004814	ENSCHIG00000014605	LRRC38 (ENSCHIG00000025277) #19	PDPN (ENSCHIG00000018527) #20	PRDM2 (ENSCHIG00000023399) #21	ENSCHIG00000010486 ##22	ENSCHIG00000006445	KAZN (ENSCHIG00000017691) #22	TMEM51 (ENSCHIG00000026268) #23	FHAD1 (ENSCHIG00000025559) #24	EFHD2 (ENSCHIG00000014798) #25	ENSCHIG00000024451 #26	ENSCHIG00000024541 #26	CASP9 (ENSCHIG00000011738) #27	DNAJC16 (ENSCHIG00000015911) #28	AGMAT (ENSCHIG00000026472) #29	DDI2 (ENSCHIG00000018822) #30	RSC1A1 (ENSCHIG00000007845)	PLEKHM2 (ENSCHIG00000024452) #31	SLC25A34 (ENSCHIG00000019912) #32	TMEM82 (ENSCHIG00000003584) #33	FBLIM1 (ENSCHIG00000017802) #34	ENSCHIG00000026022
Siberian musk deer	MODERN SPECIES	389	ENSMMSG00000022549	ENSMMSG00000022796	ENSMMSG00000022826	ENSMMSG00000004665	ENSMMSG00000005072	ENSMMSG00000005284	ENSMMSG00000005419	ENSMMSG00000005559	ENSMMSG00000005659	ENSMMSG00000005756	ENSMMSG00000005826	ENSMMSG00000006132	LRRC38 (ENSMMSG00000006158) #19	PDPN (ENSMMSG00000006182) #20	PRDM2 (ENSMMSG00000006211) #21	KAZN (ENSMMSG00000006323) #22	TMEM51 (ENSMMSG00000006826) #23	FHAD1 (ENSMMSG00000006911) #24	EFHD2 (ENSMMSG00000007253) #25	ENSMMSG00000007296 #26	ENSMMSG00000007363 #26	CASP9 (ENSMMSG00000007413) #27	DNAJC16 (ENSMMSG00000007464) #28	AGMAT (ENSMMSG00000007536) #29	ENSMMSG00000007570 #30	RSC1A1 (ENSMMSG00000007605)	PLEKHM2 (ENSMMSG00000007626) #31	SLC25A34 (ENSMMSG00000007677) #32	TMEM82 (ENSMMSG00000007707) #33	FBLIM1 (ENSMMSG00000007749) #34	SPEN (ENSMMSG00000007827)
Yarkand deer	MODERN SPECIES	5	ENSCHYG00000025611	ENSCHYG00000025592	ENSCHYG00000025542	ENSCHYG00000025520	ENSCHYG00000025494	ENSCHYG00000025470	ENSCHYG00000025459	ENSCHYG00000025443	ENSCHYG00000025290	ENSCHYG00000025053	ENSCHYG00000024944	ENSCHYG00000024866	LRRC38 (ENSCHYG00000024848) #19	PDPN (ENSCHYG00000024833) #20	PRDM2 (ENSCHYG00000024667) #21	KAZN (ENSCHYG00000024327) #22	TMEM51 (ENSCHYG00000024288) #23	FHAD1 (ENSCHYG00000024072) #24	ENSCHYG00000023937 #26	ENSCHYG00000023761 #26	CASP9 (ENSCHYG00000023723) #27	DNAJC16 (ENSCHYG00000023597) #28	AGMAT (ENSCHYG00000023518) #29	ENSCHYG00000023341	PLEKHM2 (ENSCHYG00000023065) #31	ENSCHYG00000022975 #32	TMEM82 (ENSCHYG00000022909) #33	FBLIM1 (ENSCHYG00000022827) #34	SPEN (ENSCHYG00000022636)	ZBTB17 (ENSCHYG00000022216) #36	SAMD11 (ENSCHYG00000021909)
Cetacea	ANCESTRAL SPECIES		ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b.d	ENSGT01030000234531.A.b.b.b.i.a.b.c	ENSGT01030000234531.A.b.b.b.i.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Blue whale	MODERN SPECIES		TNFRSF1B (ENSBMSG00010007324)	VPS13D (ENSBMSG00010007384)	DHRS3 (ENSBMSG00010007478)	AADACL4 (ENSBMSG00010007488)	CFAP107 (ENSBMSG00010007511)	ENSBMSG00010007532	ENSBMSG00010007544	ENSBMSG00010007602	ENSBMSG00010007792	ENSBMSG00010007917	ENSBMSG00010007941	ENSBMSG00010007958	LRRC38 (ENSBMSG00010007987) #19	PDPN (ENSBMSG00010007995) #20	PRDM2 (ENSBMSG00010008032) #21	KAZN (ENSBMSG00010008100) #22	ENSBMSG00010008186	ENSBMSG00010008193	TMEM51 (ENSBMSG00010008196) #23	FHAD1 (ENSBMSG00010008207) #24	ENSBMSG00010008241	EFHD2 (ENSBMSG00010008253) #25	CTRC (ENSBMSG00010008262)	ENSBMSG00010008297 #26	CASP9 (ENSBMSG00010008360) #27	DNAJC16 (ENSBMSG00010008382) #28	AGMAT (ENSBMSG00010008410) #29	ENSBMSG00010008433	PLEKHM2 (ENSBMSG00010008480) #31	SLC25A34 (ENSBMSG00010008526) #32	TMEM82 (ENSBMSG00010008539) #33
Odontoceti	ANCESTRAL SPECIES		ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b.d	ENSGT01030000234531.A.b.b.b.i.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Sperm whale	MODERN SPECIES	214																ENSPCTG00005014737 #22
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b.d	ENSGT01030000234531.A.b.b.b.i.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b.d	ENSGT01030000234531.A.b.b.b.i.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Monodontidae	ANCESTRAL SPECIES		ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b.d	ENSGT01030000234531.A.b.b.b.i.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Narwhal	MODERN SPECIES	304	TNFRSF1B (ENSMMNG00015006400)	VPS13D (ENSMMNG00015006173)	DHRS3 (ENSMMNG00015006042)	AADACL3 (ENSMMNG00015006022)	CFAP107 (ENSMMNG00015006001)	ENSMMNG00015005979	ENSMMNG00015005966	ENSMMNG00015005942	ENSMMNG00015005928	ENSMMNG00015005863	LRRC38 (ENSMMNG00015005800) #19	PDPN (ENSMMNG00015005780) #20	ENSMMNG00015005757	PRDM2 (ENSMMNG00015005720) #21	ENSMMNG00015005668	KAZN (ENSMMNG00015005583) #22	TMEM51 (ENSMMNG00015005532) #23	FHAD1 (ENSMMNG00015005493) #24	EFHD2 (ENSMMNG00015005471) #25	CTRC (ENSMMNG00015005454)	ENSMMNG00015005395 #26	CASP9 (ENSMMNG00015005353) #27	DNAJC16 (ENSMMNG00015005297) #28	AGMAT (ENSMMNG00015005248) #29	DDI2 (ENSMMNG00015009565) #30	RSC1A1 (ENSMMNG00015009553)	PLEKHM2 (ENSMMNG00015009498) #31	SLC25A34 (ENSMMNG00015009466) #32	TMEM82 (ENSMMNG00015009449) #33	FBLIM1 (ENSMMNG00015009423) #34	SPEN (ENSMMNG00015009352)
Beluga whale	MODERN SPECIES	51	KIAA2013 (ENSDLEG00000017314)	PLOD1 (ENSDLEG00000017268)	MFN2 (ENSDLEG00000017211)	MIIP (ENSDLEG00000017173)	TNFRSF1B (ENSDLEG00000017139)	VPS13D (ENSDLEG00000015351)	DHRS3 (ENSDLEG00000015176)	CUNH1orf158 (ENSDLEG00000015158)	ENSDLEG00000015097	ENSDLEG00000014811	ENSDLEG00000014598	LRRC38 (ENSDLEG00000014556) #19	PDPN (ENSDLEG00000014539) #20	PRDM2 (ENSDLEG00000014477) #21	ENSDLEG00000014459 ##22	KAZN (ENSDLEG00000014420) #22	TMEM51 (ENSDLEG00000014403) #23	FHAD1 (ENSDLEG00000014350) #24	EFHD2 (ENSDLEG00000014322) #25	CTRC (ENSDLEG00000014286)	ENSDLEG00000014265 #26	CASP9 (ENSDLEG00000014226) #27	DNAJC16 (ENSDLEG00000014190) #28	AGMAT (ENSDLEG00000014173) #29	ENSDLEG00000014150	PLEKHM2 (ENSDLEG00000014078) #31	SLC25A34 (ENSDLEG00000014059) #32	TMEM82 (ENSDLEG00000014032) #33	FBLIM1 (ENSDLEG00000013991) #34	SPEN (ENSDLEG00000013956)	ZBTB17 (ENSDLEG00000013910) #36
Vaquita	MODERN SPECIES		MIIP (ENSPSNG00000012075)	TNFRSF8 (ENSPSNG00000012138)	TNFRSF1B (ENSPSNG00000012455)	VPS13D (ENSPSNG00000012531)	DHRS3 (ENSPSNG00000012639)	CFAP107 (ENSPSNG00000012671)	ENSPSNG00000012759	ENSPSNG00000012912	ENSPSNG00000013025	ENSPSNG00000013486	ENSPSNG00000013599	LRRC38 (ENSPSNG00000014112) #19	PDPN (ENSPSNG00000014169) #20	ENSPSNG00000014314 #21	ENSPSNG00000014427	KAZN (ENSPSNG00000014520) #22	ENSPSNG00000015276	TMEM51 (ENSPSNG00000015327) #23	FHAD1 (ENSPSNG00000015379) #24	ENSPSNG00000015562	EFHD2 (ENSPSNG00000015611) #25	CTRC (ENSPSNG00000015637)	ENSPSNG00000015787 #26	CASP9 (ENSPSNG00000016214) #27	DNAJC16 (ENSPSNG00000016286) #28	AGMAT (ENSPSNG00000016383) #29	DDI2 (ENSPSNG00000016493) #30	RSC1A1 (ENSPSNG00000016538)	PLEKHM2 (ENSPSNG00000000003) #31	SLC25A34 (ENSPSNG00000000006) #32	TMEM82 (ENSPSNG00000000008) #33
Dolphin	MODERN SPECIES	2513																KAZN (ENSTTRG00000017165) #22	ENSTTRG00000017168
Camelidae	ANCESTRAL SPECIES	3	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.b.b	ENSGT01030000234531.A.b.b.b.i.b.a	ENSGT00940000163979	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Arabian camel	DUPLICATION
Arabian camel	MODERN SPECIES	4	PLOD1 (ENSCDRG00005017719)	MFN2 (ENSCDRG00005017822)	MIIP (ENSCDRG00005017918)	TNFRSF8 (ENSCDRG00005017963)	TNFRSF1B (ENSCDRG00005018060)	VPS13D (ENSCDRG00005018211)	DHRS3 (ENSCDRG00005018610)	AADACL3 (ENSCDRG00005018643)	CFAP107 (ENSCDRG00005018678)	ENSCDRG00005018739	ENSCDRG00005018920	ENSCDRG00005019181	PDPN (ENSCDRG00005019191) #20	PRDM2 (ENSCDRG00005019238) #21	ENSCDRG00005019343	ENSCDRG00005019377 #22	TMEM51 (ENSCDRG00005019540) #23	FHAD1 (ENSCDRG00005019578) #24	EFHD2 (ENSCDRG00005019753) #25	CTRC (ENSCDRG00005019769)	ENSCDRG00005019791 #26	CASP9 (ENSCDRG00005019814) #27	DNAJC16 (ENSCDRG00005019829) #28	AGMAT (ENSCDRG00005019855) #29	ENSCDRG00005019881	PLEKHM2 (ENSCDRG00005019947) #31	SLC25A34 (ENSCDRG00005020338) #32	TMEM82 (ENSCDRG00005020345) #33	FBLIM1 (ENSCDRG00005003370) #34	SPEN (ENSCDRG00005003423)	ZBTB17 (ENSCDRG00005003563) #36
Arabian camel	MODERN SPECIES	21	NSMAF (ENSCDRG00005020419)	TOX (ENSCDRG00005020469)	CA8 (ENSCDRG00005020483)	RAB2A (ENSCDRG00005020500)	CHD7 (ENSCDRG00005020522)	CLVS1 (ENSCDRG00005020550)	ASPH (ENSCDRG00005020568)	NKAIN3 (ENSCDRG00005020651)	GGH (ENSCDRG00005020657)	TTPA (ENSCDRG00005020665)	ENSCDRG00005020671	YTHDF3 (ENSCDRG00005020678)	ENSCDRG00005020699	ENSCDRG00005020705	CYP7B1 (ENSCDRG00005020713)	ENSCDRG00005020716 #22	ARMC1 (ENSCDRG00005020720)	MTFR1 (ENSCDRG00005020730)	PDE7A (ENSCDRG00005020748)	DNAJC5B (ENSCDRG00005020764)	TRIM55 (ENSCDRG00005020793)	CRH (ENSCDRG00005020833)	RRS1 (ENSCDRG00005020834)	ADHFE1 (ENSCDRG00005020841)	VXN (ENSCDRG00005020864)	MYBL1 (ENSCDRG00005020892)	VCPIP1 (ENSCDRG00005020916)	SGK3 (ENSCDRG00005020926)	MCMDC2 (ENSCDRG00005020934)	TCF24 (ENSCDRG00005020969)	PPP1R42 (ENSCDRG00005020972)
Suina	ANCESTRAL SPECIES	10	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.c.b	ENSGT01030000234531.A.b.b.b.i.a.b.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.c.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.c.a.a	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Chacoan peccary	MODERN SPECIES	808	AADACL4 (ENSCWAG00000007106)	AADACL3 (ENSCWAG00000007133)	CFAP107 (ENSCWAG00000007157)	ENSCWAG00000007230	ENSCWAG00000007389	ENSCWAG00000007596	ENSCWAG00000007632	ENSCWAG00000007895	ENSCWAG00000007976	ENSCWAG00000008260	ENSCWAG00000009563	LRRC38 (ENSCWAG00000009598) #19	PDPN (ENSCWAG00000009625) #20	PRDM2 (ENSCWAG00000009695) #21	ENSCWAG00000010143	KAZN (ENSCWAG00000010184) #22	TMEM51 (ENSCWAG00000010594) #23	FHAD1 (ENSCWAG00000010624) #24	EFHD2 (ENSCWAG00000010688) #25	CTRC (ENSCWAG00000010723)	ENSCWAG00000010788 #26	CASP9 (ENSCWAG00000010871) #27	DNAJC16 (ENSCWAG00000010911) #28	AGMAT (ENSCWAG00000011107) #29	DDI2 (ENSCWAG00000011183) #30	RSC1A1 (ENSCWAG00000011233)	PLEKHM2 (ENSCWAG00000011249) #31	SLC25A34 (ENSCWAG00000011336) #32	TMEM82 (ENSCWAG00000011399) #33	FBLIM1 (ENSCWAG00000011464) #34	SPEN (ENSCWAG00000011530)
Pig	MODERN SPECIES	14	ENSSSCG00000033129	ENSSSCG00000059568	ENSSSCG00000055083	ENSSSCG00000031836	ENSSSCG00000044717	ENSSSCG00000063473	ENSSSCG00000059389	ENSSSCG00000040680	ENSSSCG00000037632	LRRC38 (ENSSSCG00000003449) #19	ENSSSCG00000003448	PDPN (ENSSSCG00000003451) #20	PRDM2 (ENSSSCG00000020710) #21	ENSSSCG00000054874	ENSSSCG00000043303	KAZN (ENSSSCG00000037676) #22	TMEM51 (ENSSSCG00000021026) #23	FHAD1 (ENSSSCG00000003455) #24	EFHD2 (ENSSSCG00000003458) #25	CTRC (ENSSSCG00000054068)	CELA2A (ENSSSCG00000003459) #26	CASP9 (ENSSSCG00000003460) #27	DNAJC16 (ENSSSCG00000003464) #28	AGMAT (ENSSSCG00000003463) #29	RSC1A1 (ENSSSCG00000003461)	PLEKHM2 (ENSSSCG00000003468) #31	SLC25A34 (ENSSSCG00000032950) #32	TMEM82 (ENSSSCG00000003466) #33	FBLIM1 (ENSSSCG00000003465) #34	ZBTB17 (ENSSSCG00000026103) #36	ENSSSCG00000059667
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Carnivora	ANCESTRAL SPECIES	1	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Caniformia	ANCESTRAL SPECIES	2	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000170703.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Ursidae	ANCESTRAL SPECIES		ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000170703.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36	ENSGT00390000000265 #37
Ursus	ANCESTRAL SPECIES		ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT00940000162571 #19	ENSGT00940000163979	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957.y #36	ENSGT00390000000265 #37
American black bear	MODERN SPECIES	1361																KAZN (ENSUAMG00000007169) #22
Polar bear	MODERN SPECIES	189	NPPB (ENSUMAG00000022754)	PLOD1 (ENSUMAG00000022265)	MFN2 (ENSUMAG00000022141)	MIIP (ENSUMAG00000022126)	TNFRSF8 (ENSUMAG00000022114)	ENSUMAG00000022101	ENSUMAG00000022092	VPS13D (ENSUMAG00000021837)	DHRS3 (ENSUMAG00000021788)	AADACL4 (ENSUMAG00000021786)	AADACL3 (ENSUMAG00000021783)	CFAP107 (ENSUMAG00000021780)	ENSUMAG00000021779	ENSUMAG00000021778 #20	PRDM2 (ENSUMAG00000021770) #21	KAZN (ENSUMAG00000021744) #22	ENSUMAG00000021738 #23	FHAD1 (ENSUMAG00000021726) #24	EFHD2 (ENSUMAG00000021718) #25	CTRC (ENSUMAG00000021713)	CASP9 (ENSUMAG00000021709) #27	DNAJC16 (ENSUMAG00000021707) #28	AGMAT (ENSUMAG00000021705) #29	ENSUMAG00000021700	PLEKHM2 (ENSUMAG00000021666) #31	SLC25A34 (ENSUMAG00000021659) #32	FBLIM1 (ENSUMAG00000021656) #34	SPEN (ENSUMAG00000021641)	ENSUMAG00000021628 #36	SRARP (ENSUMAG00000021624) #37	HSPB7 (ENSUMAG00000021617)
Giant Panda	MODERN SPECIES	2	KIAA2013 (ENSAMEG00000009882)	PLOD1 (ENSAMEG00000009887)	MFN2 (ENSAMEG00000010033)	MIIP (ENSAMEG00000010114)	TNFRSF8 (ENSAMEG00000010132)	TNFRSF1B (ENSAMEG00000010153)	VPS13D (ENSAMEG00000010179)	ENSAMEG00000000611	DHRS3 (ENSAMEG00000006744)	AADACL4 (ENSAMEG00000006740)	AADACL3 (ENSAMEG00000030191)	CFAP107 (ENSAMEG00000006730)	LRRC38 (ENSAMEG00000006725) #19	PDPN (ENSAMEG00000029968) #20	PRDM2 (ENSAMEG00000006714) #21	KAZN (ENSAMEG00000011994) #22	TMEM51 (ENSAMEG00000027328) #23	FHAD1 (ENSAMEG00000011967) #24	ENSAMEG00000027158 #25	ENSAMEG00000011940	ENSAMEG00000011912 #27	ENSAMEG00000011891 #28	AGMAT (ENSAMEG00000011881) #29	ENSAMEG00000018736	PLEKHM2 (ENSAMEG00000011853) #31	SLC25A34 (ENSAMEG00000011844) #32	TMEM82 (ENSAMEG00000011841) #33	FBLIM1 (ENSAMEG00000011829) #34	SPEN (ENSAMEG00000011817)	ENSAMEG00000030804 #36	SRARP (ENSAMEG00000030564) #37
Mustelinae	ANCESTRAL SPECIES		ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800.c	ENSGT00950000183083.b	ENSGT00940000170703.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744.c	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
American mink	MODERN SPECIES	9	MFN2 (ENSNVIG00000010611)	MIIP (ENSNVIG00000010630)	TNFRSF8 (ENSNVIG00000010646)	ENSNVIG00000010660	ENSNVIG00000010689	VPS13D (ENSNVIG00000010731)	ENSNVIG00000010956	DHRS3 (ENSNVIG00000010957)	ADCL4 (ENSNVIG00000010972)	AADACL3 (ENSNVIG00000010988)	CFAP107 (ENSNVIG00000010992)	LRRC38 (ENSNVIG00000011014) #19	PDPN (ENSNVIG00000011020) #20	PRDM2 (ENSNVIG00000011077) #21	ENSNVIG00000011151	KAZN (ENSNVIG00000011169) #22	TMEM51 (ENSNVIG00000011243) #23	FHAD1 (ENSNVIG00000011294) #24	EFHD2 (ENSNVIG00000011427) #25	CTRC (ENSNVIG00000011438)	CASP9 (ENSNVIG00000011449) #27	DJC16 (ENSNVIG00000011474) #28	AGMAT (ENSNVIG00000011545) #29	DDI2 (ENSNVIG00000011569) #30	ENSNVIG00000011620	PLEKHM2 (ENSNVIG00000011636) #31	SLC25A34 (ENSNVIG00000011676) #32	TMEM82 (ENSNVIG00000011685) #33	FBLI1 (ENSNVIG00000011696) #34	SPEN (ENSNVIG00000011765)	ZBTB17 (ENSNVIG00000011847) #36
Ferret	MODERN SPECIES	167	MIIP (ENSMPUG00000016386)	TNFRSF8 (ENSMPUG00000016383)	TNFRSF1B (ENSMPUG00000016381)	VPS13D (ENSMPUG00000016376)	ENSMPUG00000016374	ENSMPUG00000016373	DHRS3 (ENSMPUG00000016371)	AADACL4 (ENSMPUG00000016369)	AADACL3 (ENSMPUG00000016368)	CFAP107 (ENSMPUG00000016365)	ENSMPUG00000016357	LRRC38 (ENSMPUG00000016355) #19	PDPN (ENSMPUG00000016354) #20	ENSMPUG00000016353	PRDM2 (ENSMPUG00000016352) #21	KAZN (ENSMPUG00000016351) #22	TMEM51 (ENSMPUG00000016350) #23	FHAD1 (ENSMPUG00000016348) #24	EFHD2 (ENSMPUG00000016346) #25	CTRC (ENSMPUG00000016345)	CASP9 (ENSMPUG00000016342) #27	DNAJC16 (ENSMPUG00000016341) #28	AGMAT (ENSMPUG00000016340) #29	DDI2 (ENSMPUG00000016332) #30	RSC1A1 (ENSMPUG00000018833)	PLEKHM2 (ENSMPUG00000016329) #31	SLC25A34 (ENSMPUG00000016326) #32	TMEM82 (ENSMPUG00000016323) #33	FBLIM1 (ENSMPUG00000016318) #34	SPEN (ENSMPUG00000016317)	ZBTB17 (ENSMPUG00000016313) #36
Canidae	ANCESTRAL SPECIES	14	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215.c	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT01040000241632	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Red fox	MODERN SPECIES	88	MIIP (ENSVVUG00000028595)	TNFRSF1B (ENSVVUG00000028616)	VPS13D (ENSVVUG00000028650)	ENSVVUG00000028868	DHRS3 (ENSVVUG00000028869)	AADACL4 (ENSVVUG00000028871)	AADACL3 (ENSVVUG00000028875)	CUNH1orf158 (ENSVVUG00000028877)	ENSVVUG00000028879 #19	PDPN (ENSVVUG00000028880) #20	PRDM2 (ENSVVUG00000028889) #21	ENSVVUG00000028901	ENSVVUG00000028903	ENSVVUG00000028915	ENSVVUG00000028916 ##22	KAZN (ENSVVUG00000028921) #22	TMEM51 (ENSVVUG00000028929) #23	FHAD1 (ENSVVUG00000028931) #24	EFHD2 (ENSVVUG00000028938) #25	CASP9 (ENSVVUG00000028939) #27	CTRC (ENSVVUG00000028940)	DNAJC16 (ENSVVUG00000028941) #28	AGMAT (ENSVVUG00000028942) #29	DDI2 (ENSVVUG00000028943) #30	RSC1A1 (ENSVVUG00000028944)	PLEKHM2 (ENSVVUG00000028945) #31	SLC25A34 (ENSVVUG00000028947) #32	TMEM82 (ENSVVUG00000028948) #33	FBLIM1 (ENSVVUG00000028949) #34	SPEN (ENSVVUG00000028951)	ZBTB17 (ENSVVUG00000028953) #36
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215.c	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT01040000241632	ENSGT00940000158724	ENSGT00940000163565	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Dog	MODERN SPECIES	11	NPPA (ENSCAFG00845001994)	KIAA2013 (ENSCAFG00845001915)	PLOD1 (ENSCAFG00845001815)	MFN2 (ENSCAFG00845001739)	MIIP (ENSCAFG00845001629)	TNFRSF1B (ENSCAFG00845001488)	ENSCAFG00845001458	ENSCAFG00845001424	DHRS3 (ENSCAFG00845001328)	ENSCAFG00845001302	AADACL3 (ENSCAFG00845001278)	CFAP107 (ENSCAFG00845001256)	LRRC38 (ENSCAFG00845001236) #19	PDPN (ENSCAFG00845001081) #20	PRDM2 (ENSCAFG00845001004) #21	KAZN (ENSCAFG00845000851) #22	TMEM51 (ENSCAFG00845000766) #23	FHAD1 (ENSCAFG00845000555) #24	ENSCAFG00845000444	CASP9 (ENSCAFG00845000379) #27	DNAJC16 (ENSCAFG00845000315) #28	AGMAT (ENSCAFG00845000281) #29	ENSCAFG00845000240	PLEKHM2 (ENSCAFG00845004994) #31	SLC25A34 (ENSCAFG00845004977) #32	TMEM82 (ENSCAFG00845004965) #33	FBLIM1 (ENSCAFG00845004948) #34	SPEN (ENSCAFG00845004928)	ZBTB17 (ENSCAFG00845004912) #36	SRARP (ENSCAFG00845004899) #37	HSPB7 (ENSCAFG00845004889)
Dingo	MODERN SPECIES	41								DHRS3 (ENSCAFG00020004688)	AADACL4 (ENSCAFG00020004697)	AADACL3 (ENSCAFG00020004712)	CFAP107 (ENSCAFG00020004715)	LRRC38 (ENSCAFG00020004735) #19	PDPN (ENSCAFG00020004738) #20	PRDM2 (ENSCAFG00020004754) #21	ENSCAFG00020004760 ##22	KAZN (ENSCAFG00020004768) #22	ENSCAFG00020004777	TMEM51 (ENSCAFG00020004778) #23	FHAD1 (ENSCAFG00020004782) #24	ENSCAFG00020004790 #25	CTRC (ENSCAFG00020004793)	CASP9 (ENSCAFG00020004802) #27	ENSCAFG00020004806 #28	AGMAT (ENSCAFG00020004808) #29	DDI2 (ENSCAFG00020004832) #30	RSC1A1 (ENSCAFG00020004838)	PLEKHM2 (ENSCAFG00020004845) #31	SLC25A34 (ENSCAFG00020004858) #32	TMEM82 (ENSCAFG00020004877) #33	FBLIM1 (ENSCAFG00020004885) #34	ENSCAFG00020004893
Felidae	ANCESTRAL SPECIES	18	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Panthera	ANCESTRAL SPECIES	4	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Tiger	DUPLICATION
Tiger	MODERN SPECIES	187	MFN2 (ENSPTIG00000020008)	ENSPTIG00000019970	ENSPTIG00000019424	TNFRSF1B (ENSPTIG00000018597)	VPS13D (ENSPTIG00000017066)	DHRS3 (ENSPTIG00000016902)	AADACL4 (ENSPTIG00000015939)	AADACL3 (ENSPTIG00000015446)	CFAP107 (ENSPTIG00000015353)	ENSPTIG00000014625	ENSPTIG00000013585 #20	PRDM2 (ENSPTIG00000013350) #21	ENSPTIG00000013314	ENSPTIG00000013102	ENSPTIG00000012597 #22	ENSPTIG00000012333 #22	ENSPTIG00000012301 #23	ENSPTIG00000011875 #24	CTRC (ENSPTIG00000011663)	CASP9 (ENSPTIG00000011356) #27	DNAJC16 (ENSPTIG00000010992) #28	AGMAT (ENSPTIG00000010031) #29	DDI2 (ENSPTIG00000009951) #30	PLEKHM2 (ENSPTIG00000009093) #31	SLC25A34 (ENSPTIG00000008906) #32	ENSPTIG00000008568 #34	SRARP (ENSPTIG00000007048) #37	HSPB7 (ENSPTIG00000006884)	ENSPTIG00000004645	FAM131C (ENSPTIG00000002805)	EPHA2 (ENSPTIG00000000837)
Tiger	MODERN SPECIES	187	PLOD1 (ENSPTIG00000020156)	MFN2 (ENSPTIG00000020008)	ENSPTIG00000019970	ENSPTIG00000019424	TNFRSF1B (ENSPTIG00000018597)	VPS13D (ENSPTIG00000017066)	DHRS3 (ENSPTIG00000016902)	AADACL4 (ENSPTIG00000015939)	AADACL3 (ENSPTIG00000015446)	CFAP107 (ENSPTIG00000015353)	ENSPTIG00000014625	ENSPTIG00000013585 #20	PRDM2 (ENSPTIG00000013350) #21	ENSPTIG00000013314	ENSPTIG00000013102	ENSPTIG00000012597 #22	ENSPTIG00000012333 #22	ENSPTIG00000012301 #23	ENSPTIG00000011875 #24	CTRC (ENSPTIG00000011663)	CASP9 (ENSPTIG00000011356) #27	DNAJC16 (ENSPTIG00000010992) #28	AGMAT (ENSPTIG00000010031) #29	DDI2 (ENSPTIG00000009951) #30	PLEKHM2 (ENSPTIG00000009093) #31	SLC25A34 (ENSPTIG00000008906) #32	ENSPTIG00000008568 #34	SRARP (ENSPTIG00000007048) #37	HSPB7 (ENSPTIG00000006884)	ENSPTIG00000004645	FAM131C (ENSPTIG00000002805)
Panthera_a	ANCESTRAL SPECIES	14	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
lion	DUPLICATION
lion	MODERN SPECIES	8	MIIP (ENSPLOG00000006597)	ENSPLOG00000006579	TNFRSF1B (ENSPLOG00000006521)	VPS13D (ENSPLOG00000006024)	DHRS3 (ENSPLOG00000005821)	AADACL4 (ENSPLOG00000005774)	AADACL3 (ENSPLOG00000005743)	CFAP107 (ENSPLOG00000005718)	ENSPLOG00000005536	LRRC38 (ENSPLOG00000005430) #19	PDPN (ENSPLOG00000005381) #20	PRDM2 (ENSPLOG00000005291) #21	ENSPLOG00000005262	ENSPLOG00000005254 ##22	ENSPLOG00000005241 #22	ENSPLOG00000005226 #22	TMEM51 (ENSPLOG00000005219) #23	ENSPLOG00000005191 #24	EFHD2 (ENSPLOG00000005163) #25	CTRC (ENSPLOG00000005134)	CASP9 (ENSPLOG00000005099) #27	DNAJC16 (ENSPLOG00000005054) #28	AGMAT (ENSPLOG00000005024) #29	DDI2 (ENSPLOG00000004991) #30	PLEKHM2 (ENSPLOG00000004965) #31	SLC25A34 (ENSPLOG00000004954) #32	TMEM82 (ENSPLOG00000004930) #33	FBLIM1 (ENSPLOG00000004900) #34	SPEN (ENSPLOG00000004845)	ZBTB17 (ENSPLOG00000004804) #36	SRARP (ENSPLOG00000004770) #37
lion	MODERN SPECIES	8	MFN2 (ENSPLOG00000006631)	MIIP (ENSPLOG00000006597)	ENSPLOG00000006579	TNFRSF1B (ENSPLOG00000006521)	VPS13D (ENSPLOG00000006024)	DHRS3 (ENSPLOG00000005821)	AADACL4 (ENSPLOG00000005774)	AADACL3 (ENSPLOG00000005743)	CFAP107 (ENSPLOG00000005718)	ENSPLOG00000005536	LRRC38 (ENSPLOG00000005430) #19	PDPN (ENSPLOG00000005381) #20	PRDM2 (ENSPLOG00000005291) #21	ENSPLOG00000005262	ENSPLOG00000005254 ##22	ENSPLOG00000005241 #22	ENSPLOG00000005226 #22	TMEM51 (ENSPLOG00000005219) #23	ENSPLOG00000005191 #24	EFHD2 (ENSPLOG00000005163) #25	CTRC (ENSPLOG00000005134)	CASP9 (ENSPLOG00000005099) #27	DNAJC16 (ENSPLOG00000005054) #28	AGMAT (ENSPLOG00000005024) #29	DDI2 (ENSPLOG00000004991) #30	PLEKHM2 (ENSPLOG00000004965) #31	SLC25A34 (ENSPLOG00000004954) #32	TMEM82 (ENSPLOG00000004930) #33	FBLIM1 (ENSPLOG00000004900) #34	SPEN (ENSPLOG00000004845)	ZBTB17 (ENSPLOG00000004804) #36
leopard	MODERN SPECIES	37	MFN2 (ENSPPRG00000007167)	MIIP (ENSPPRG00000006601)	TNFRSF8 (ENSPPRG00000006333)	TNFRSF1B (ENSPPRG00000004270)	VPS13D (ENSPPRG00000003625)	DHRS3 (ENSPPRG00000003032)	AADACL4 (ENSPPRG00000002552)	AADACL3 (ENSPPRG00000002379)	CFAP107 (ENSPPRG00000002122)	ENSPPRG00000001268	LRRC38 (ENSPPRG00000000810) #19	PDPN (ENSPPRG00000000655) #20	PRDM2 (ENSPPRG00000022577) #21	ENSPPRG00000020081	ENSPPRG00000014940	ENSPPRG00000014628 #22	ENSPPRG00000012106	TMEM51 (ENSPPRG00000011953) #23	ENSPPRG00000011408 #24	EFHD2 (ENSPPRG00000010382) #25	CTRC (ENSPPRG00000009465)	CASP9 (ENSPPRG00000009345) #27	DNAJC16 (ENSPPRG00000008217) #28	AGMAT (ENSPPRG00000007223) #29	DDI2 (ENSPPRG00000007095) #30	RSC1A1 (ENSPPRG00000014925)	PLEKHM2 (ENSPPRG00000006492) #31	SLC25A34 (ENSPPRG00000004027) #32	TMEM82 (ENSPPRG00000003864) #33	FBLIM1 (ENSPPRG00000003677) #34	ZBTB17 (ENSPPRG00000002547) #36
Cat	MODERN SPECIES	239	NPPB (ENSFCAG00000000072)	KIAA2013 (ENSFCAG00000030474)	PLOD1 (ENSFCAG00000000074)	MFN2 (ENSFCAG00000000076)	MIIP (ENSFCAG00000000077)	TNFRSF8 (ENSFCAG00000001453)	TNFRSF1B (ENSFCAG00000003778)	VPS13D (ENSFCAG00000003779)	DHRS3 (ENSFCAG00000000576)	AADACL3 (ENSFCAG00000031519)	CFAP107 (ENSFCAG00000027769)	ENSFCAG00000023782	LRRC38 (ENSFCAG00000000580) #19	PDPN (ENSFCAG00000007570) #20	PRDM2 (ENSFCAG00000032471) #21	KAZN (ENSFCAG00000038995) #22	TMEM51 (ENSFCAG00000043261) #23	ENSFCAG00000003267 #24	EFHD2 (ENSFCAG00000041741) #25	CTRC (ENSFCAG00000003268)	CASP9 (ENSFCAG00000026776) #27	DNAJC16 (ENSFCAG00000011582) #28	AGMAT (ENSFCAG00000011584) #29	ENSFCAG00000011585	PLEKHM2 (ENSFCAG00000011586) #31	SLC25A34 (ENSFCAG00000011588) #32	TMEM82 (ENSFCAG00000011589) #33	FBLIM1 (ENSFCAG00000011590) #34	SPEN (ENSFCAG00000010165)	ZBTB17 (ENSFCAG00000023421) #36	SRARP (ENSFCAG00000044158) #37
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000154513.A	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b.l
Equus	ANCESTRAL SPECIES	2	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b.j	ENSGT01040000241632	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b.k	ENSGT00940000157087.a.b.l
Horse	MODERN SPECIES	11	PLOD1 (ENSECAG00000022842)	MFN2 (ENSECAG00000016296)	MIIP (ENSECAG00000014794)	TNFRSF8 (ENSECAG00000014108)	TNFRSF1B (ENSECAG00000012481)	VPS13D (ENSECAG00000016150)	ENSECAG00000045103	DHRS3 (ENSECAG00000013582)	AADACL3 (ENSECAG00000013280)	CFAP107 (ENSECAG00000033407)	ENSECAG00000010285	LRRC38 (ENSECAG00000010195) #19	ENSECAG00000032595 #20	ENSECAG00000050440 #21	PRDM2 (ENSECAG00000008911)	KAZN (ENSECAG00000006829) #22	FHAD1 (ENSECAG00000025126) #24	CTRC (ENSECAG00000025069)	ENSECAG00000020902 #26	CASP9 (ENSECAG00000017291) #27	DNAJC16 (ENSECAG00000010422) #28	AGMAT (ENSECAG00000008308) #29	ENSECAG00000041115	PLEKHM2 (ENSECAG00000014652) #31	SLC25A34 (ENSECAG00000013382) #32	TMEM82 (ENSECAG00000013016) #33	FBLIM1 (ENSECAG00000011874) #34	ENSECAG00000050306	SPEN (ENSECAG00000008833)	ZBTB17 (ENSECAG00000024826) #36	SRARP (ENSECAG00000024814) #37
Donkey	MODERN SPECIES	25	TNFRSF8 (ENSEASG00005016474)	TNFRSF1B (ENSEASG00005033534)	VPS13D (ENSEASG00005016180)	ENSEASG00005031338	DHRS3 (ENSEASG00005016047)	AADACL3 (ENSEASG00005027488)	ENSEASG00005008351	CFAP107 (ENSEASG00005016042)	ENSEASG00005015988	ENSEASG00005015978 #19	ENSEASG00005015975 #20	ENSEASG00005028661	PRDM2 (ENSEASG00005015970) #21	ENSEASG00005027620	ENSEASG00005037107	ENSEASG00005032223 #22	TMEM51 (ENSEASG00005015962) #23	FHAD1 (ENSEASG00005015958) #24	EFHD2 (ENSEASG00005015953) #25	CTRC (ENSEASG00005015948)	ENSEASG00005015940 #26	CASP9 (ENSEASG00005015937) #27	DNAJC16 (ENSEASG00005015931) #28	AGMAT (ENSEASG00005015929) #29	ENSEASG00005015927	PLEKHM2 (ENSEASG00005015922) #31	SLC25A34 (ENSEASG00005031113) #32	TMEM82 (ENSEASG00005015917) #33	FBLIM1 (ENSEASG00005015915) #34	ENSEASG00005028986	ENSEASG00005032545
Chiroptera	ANCESTRAL SPECIES		ENSGT00940000154513.A	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b.l
Megabat	MODERN SPECIES	2995																KAZN (ENSPVAG00000006039) #22	ENSPVAG00000006042	TMEM51 (ENSPVAG00000006044) #23	ENSPVAG00000006045 #24
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00940000154513.A	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b	ENSGT00940000162571 #19	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b.l
Greater horseshoe bat	MODERN SPECIES	27	PLOD1 (ENSRFEG00010017314)	MFN2 (ENSRFEG00010017368)	MIIP (ENSRFEG00010007938)	TNFRSF8 (ENSRFEG00010008019)	TNFRSF1B (ENSRFEG00010008246)	VPS13D (ENSRFEG00010008330)	DHRS3 (ENSRFEG00010008475)	ENSRFEG00010008557	ENSRFEG00010008603	ENSRFEG00010008691	ENSRFEG00010008754	ENSRFEG00010008828	LRRC38 (ENSRFEG00010008885) #19	PDPN (ENSRFEG00010008924) #20	PRDM2 (ENSRFEG00010009040) #21	KAZN (ENSRFEG00010009239) #22	TMEM51 (ENSRFEG00010009731) #23	FHAD1 (ENSRFEG00010009808) #24	EFHD2 (ENSRFEG00010010221) #25	CTRC (ENSRFEG00010010289)	ENSRFEG00010010440 #26	CASP9 (ENSRFEG00010010566) #27	DNAJC16 (ENSRFEG00010010616) #28	AGMAT (ENSRFEG00010010690) #29	ENSRFEG00010010770	PLEKHM2 (ENSRFEG00010010902) #31	SLC25A34 (ENSRFEG00010011058) #32	TMEM82 (ENSRFEG00010011094) #33	FBLIM1 (ENSRFEG00010011168) #34	SPEN (ENSRFEG00010011277)	ZBTB17 (ENSRFEG00010011332) #36
Microbat	DUPLICATION
Microbat	MODERN SPECIES	2767																ENSMLUG00000009858 #22
Microbat	MODERN SPECIES	1593																ENSMLUG00000009830 #22	TMEM51 (ENSMLUG00000009586) #23
Atlantogenata	ANCESTRAL SPECIES	4	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b	ENSGT00940000161054	ENSGT00940000163979	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00400000022892	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016.j #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34
Afrotheria	ANCESTRAL SPECIES	14	ENSGT00940000154513.A	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.e.a	ENSGT00940000163979	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00400000022892	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744.a	ENSGT00390000015175 #31	ENSGT00940000160016.j #32	ENSGT00500000045021 #33	ENSGT00940000157087.a.b
Afrotheria_a	ANCESTRAL SPECIES	14	ENSGT00940000154513.A	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.e.a.b	ENSGT00940000163979	ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744.a	ENSGT00390000015175 #31	ENSGT00940000160016.j #32	ENSGT00500000045021 #33	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Hyrax	MODERN SPECIES	6703																KAZN (ENSPCAG00000007597) #22
Elephant	MODERN SPECIES	270	KIAA2013 (ENSLAFG00000030460)	ENSLAFG00000020696	PLOD1 (ENSLAFG00000000373)	MFN2 (ENSLAFG00000000377)	MIIP (ENSLAFG00000032600)	ENSLAFG00000008445	ENSLAFG00000000218	VPS13D (ENSLAFG00000000219)	DHRS3 (ENSLAFG00000014902)	ENSLAFG00000005997	CFAP107 (ENSLAFG00000017710)	ENSLAFG00000005998	ENSLAFG00000009340	ENSLAFG00000010389 #20	PRDM2 (ENSLAFG00000012229) #21	KAZN (ENSLAFG00000000305) #22	TMEM51 (ENSLAFG00000012901) #23	FHAD1 (ENSLAFG00000015693) #24	EFHD2 (ENSLAFG00000015705) #25	CTRC (ENSLAFG00000027946)	ENSLAFG00000015756 #26	CASP9 (ENSLAFG00000015764) #27	DNAJC16 (ENSLAFG00000013518) #28	AGMAT (ENSLAFG00000013524) #29	DDI2 (ENSLAFG00000020709) #30	ENSLAFG00000015103	PLEKHM2 (ENSLAFG00000004509) #31	SLC25A34 (ENSLAFG00000004515) #32	TMEM82 (ENSLAFG00000029120) #33	SPEN (ENSLAFG00000004524)	ZBTB17 (ENSLAFG00000004528) #36
Tenrec	MODERN SPECIES	7961																KAZN (ENSETEG00000012121) #22	ENSETEG00000012125
Xenarthra	ANCESTRAL SPECIES	1068												ENSGT00390000000013 #20	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22
Armadillo	MODERN SPECIES	2546										ENSDNOG00000032634 #20	ENSDNOG00000032461	PRDM2 (ENSDNOG00000012965) #21	ENSDNOG00000031918	ENSDNOG00000005794	ENSDNOG00000047927 ##22	ENSDNOG00000032076 #22
Sloth	MODERN SPECIES	7100																ENSCHOG00000010610 #22
Marsupialia	ANCESTRAL SPECIES	10	ENSGT00940000154513.A	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000163565	ENSGT00390000014553	ENSGT00940000162571 #19	ENSGT00940000167236	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000156650.h	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.c #30	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00940000163565	ENSGT00390000014553	ENSGT00940000162571 #19	ENSGT00940000167236	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000156650.h	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.c #30	ENSGT00390000005744	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34
Diprotodontia	ANCESTRAL SPECIES	3	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00940000163565	ENSGT00390000014553	ENSGT00940000162571 #19	ENSGT00940000167236	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000156650.h	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.c #30	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
Diprotodontia_a	ANCESTRAL SPECIES	4	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00940000163565	ENSGT00390000014553	ENSGT00940000162571 #19	ENSGT00940000167236	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b	ENSGT01030000234528.B.a.a #26	ENSGT00940000159698 #27	ENSGT00940000156650.h	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.c #30	ENSGT00390000015175 #31	ENSGT00940000160016 #32	ENSGT00500000045021 #33	ENSGT00940000159003 #34	ENSGT00940000157087.a.b
koala	MODERN SPECIES	8	KIAA2013 (ENSPCIG00000030263)	PLOD1 (ENSPCIG00000030260)	MFN2 (ENSPCIG00000030255)	ENSPCIG00000030620	ENSPCIG00000034907	ENSPCIG00000020125	VPS13D (ENSPCIG00000020924)	DHRS3 (ENSPCIG00000023864)	ENSPCIG00000031887	ENSPCIG00000036476	ENSPCIG00000002654	LRRC38 (ENSPCIG00000013352) #19	ENSPCIG00000032121	PRDM2 (ENSPCIG00000036392) #21	ENSPCIG00000028562 ##22	KAZN (ENSPCIG00000028561) #22	TMEM51 (ENSPCIG00000028556) #23	ENSPCIG00000028555	ENSPCIG00000028552 #24	EFHD2 (ENSPCIG00000028551) #25	CTRC (ENSPCIG00000028550)	ENSPCIG00000028549 #26	CASP9 (ENSPCIG00000028548) #27	ENSPCIG00000028547	DNAJC16 (ENSPCIG00000016773) #28	AGMAT (ENSPCIG00000016772) #29	ENSPCIG00000028545 #30	PLEKHM2 (ENSPCIG00000028544) #31	SLC25A34 (ENSPCIG00000028542) #32	TMEM82 (ENSPCIG00000028540) #33	FBLIM1 (ENSPCIG00000015953) #34
Common wonbat	MODERN SPECIES	914													LRRC38 (ENSVURG00010001587) #19	PRDM2 (ENSVURG00010001574) #21	ENSVURG00010001538 ##22	KAZN (ENSVURG00010001526) #22	TMEM51 (ENSVURG00010001506) #23	EFHD2 (ENSVURG00010001485) #25	CTRC (ENSVURG00010001470)	ENSVURG00010001449 #26	CASP9 (ENSVURG00010001427) #27	DNAJC16 (ENSVURG00010001370) #28	AGMAT (ENSVURG00010001334) #29	ENSVURG00010001299 #30	PLEKHM2 (ENSVURG00010001231) #31	SLC25A34 (ENSVURG00010001209) #32	TMEM82 (ENSVURG00010001195) #33	FBLIM1 (ENSVURG00010001182) #34	SPEN (ENSVURG00010001113)	ZBTB17 (ENSVURG00010001068) #36	HSPB7 (ENSVURG00010001060)
Wallaby	MODERN SPECIES	9555																KAZN (ENSMEUG00000011809) #22
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000008550	ENSSHAG00000028300	KIAA2013 (ENSSHAG00000027614)	MFN2 (ENSSHAG00000029532)	ENSSHAG00000024945	ENSSHAG00000023378	ENSSHAG00000009156	ENSSHAG00000005496	DHRS3 (ENSSHAG00000004396)	ENSSHAG00000029446	ENSSHAG00000005662	CFAP107 (ENSSHAG00000005025)	LRRC38 (ENSSHAG00000022953) #19	ENSSHAG00000015346	PRDM2 (ENSSHAG00000014550) #21	KAZN (ENSSHAG00000003020) #22	TMEM51 (ENSSHAG00000021615) #23	EFHD2 (ENSSHAG00000024172) #25	CTRC (ENSSHAG00000010348)	ENSSHAG00000010173 #26	CASP9 (ENSSHAG00000009783) #27	ENSSHAG00000023715	DNAJC16 (ENSSHAG00000023312) #28	AGMAT (ENSSHAG00000009265) #29	ENSSHAG00000031158	PLEKHM2 (ENSSHAG00000007916) #31	ENSSHAG00000022872 #33	FBLIM1 (ENSSHAG00000006716) #34	SPEN (ENSSHAG00000027193)	ZBTB17 (ENSSHAG00000004679) #36	HSPB7 (ENSSHAG00000002023)
Opossum	MODERN SPECIES	3	ENSMODG00000013144	ENSMODG00000045413	ENSMODG00000013137	KCNK6 (ENSMODG00000013130)	YIF1B (ENSMODG00000013126)	ENSMODG00000013117	ENSMODG00000023798	SIPA1L3 (ENSMODG00000013113)	VPS13D (ENSMODG00000012443)	DHRS3 (ENSMODG00000012387)	ENSMODG00000012382	CFAP107 (ENSMODG00000025501)	LRRC38 (ENSMODG00000012379) #19	PRDM2 (ENSMODG00000012362) #21	ENSMODG00000042736 ##22	KAZN (ENSMODG00000012346) #22	TMEM51 (ENSMODG00000012339) #23	CADM4 (ENSMODG00000020835)	ENSMODG00000028135	ENSMODG00000020833	SMG9 (ENSMODG00000020832)	ENSMODG00000043239	ENSMODG00000020830	ENSMODG00000020831	ENSMODG00000020829	ENSMODG00000041549	ENSMODG00000040397	ENSMODG00000045966	HAS1 (ENSMODG00000020827)	ENSMODG00000043283	ENSMODG00000029011
Platypus	DUPLICATION
Platypus	MODERN SPECIES	16	NPPA (ENSOANG00000002739)	ENSOANG00000050191	KIAA2013 (ENSOANG00000036754)	PLOD1 (ENSOANG00000004585)	MFN2 (ENSOANG00000001700)	ENSOANG00000042109	ENSOANG00000040177	ENSOANG00000044937	VPS13D (ENSOANG00000006103)	DHRS3 (ENSOANG00000049465)	ENSOANG00000006098	ENSOANG00000006097	LRRC38 (ENSOANG00000047051) #19	PDPN (ENSOANG00000045878)	PRDM2 (ENSOANG00000009908) #21	ENSOANG00000013898 #22	ENSOANG00000012958 #22	TMEM51 (ENSOANG00000047456) #23	ENSOANG00000046034	ENSOANG00000015311 #24	EFHD2 (ENSOANG00000036701) #25	CTRC (ENSOANG00000003636)	ENSOANG00000009837 #26	CASP9 (ENSOANG00000009836) #27	DNAJC16 (ENSOANG00000044846) #28	AGMAT (ENSOANG00000036729) #29	ENSOANG00000012072	PLEKHM2 (ENSOANG00000005720) #31	SLC25A34 (ENSOANG00000048062) #32	ENSOANG00000008988 #33	FBLIM1 (ENSOANG00000022612) #34
Platypus	MODERN SPECIES	16	ENSOANG00000050191	KIAA2013 (ENSOANG00000036754)	PLOD1 (ENSOANG00000004585)	MFN2 (ENSOANG00000001700)	ENSOANG00000042109	ENSOANG00000040177	ENSOANG00000044937	VPS13D (ENSOANG00000006103)	DHRS3 (ENSOANG00000049465)	ENSOANG00000006098	ENSOANG00000006097	LRRC38 (ENSOANG00000047051) #19	PDPN (ENSOANG00000045878)	PRDM2 (ENSOANG00000009908) #21	ENSOANG00000013898 #22	ENSOANG00000012958 #22	TMEM51 (ENSOANG00000047456) #23	ENSOANG00000046034	ENSOANG00000015311 #24	EFHD2 (ENSOANG00000036701) #25	CTRC (ENSOANG00000003636)	ENSOANG00000009837 #26	CASP9 (ENSOANG00000009836) #27	DNAJC16 (ENSOANG00000044846) #28	AGMAT (ENSOANG00000036729) #29	ENSOANG00000012072	PLEKHM2 (ENSOANG00000005720) #31	SLC25A34 (ENSOANG00000048062) #32	ENSOANG00000008988 #33	FBLIM1 (ENSOANG00000022612) #34	SPEN (ENSOANG00000050773)