Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000013727.c ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b #7 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00390000002770 #21 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Glires ANCESTRAL SPECIES ENSGT00390000013727.c ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b #7 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00390000002770 #21 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Rodentia ANCESTRAL SPECIES ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.e.b ##7 ENSGT01030000234531.A.b.b.b.f ##7 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00390000002770 #21 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Rodentia_B ANCESTRAL SPECIES ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.e.b ##7 ENSGT01030000234531.A.b.b.b.e.a #7 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00390000002770 #21 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Myomorpha ANCESTRAL SPECIES 3 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630.a ENSGT00940000157630.b.b ENSGT00940000157630.b.a ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.e.b ##7 ENSGT01030000234531.A.b.b.b.e.a #7 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00390000002770 #21 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Muroidea ANCESTRAL SPECIES 3 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630.a.a ENSGT00940000157630.a.b ENSGT00940000157630.b.b ENSGT00940000157630.b.a ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.e.b ##7 ENSGT01030000234531.A.b.b.b.e.a.b #15 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00390000002770 #21 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00940000157630.a.a.b ENSGT00940000157630.a.b ENSGT00940000163565 ENSGT00940000157630.b.a ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.e.b ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b #7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #14 ENSGT01030000234531.A.b.b.b.e.a.b.b #15 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00390000002770 #21 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Murinae ANCESTRAL SPECIES 2 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.e.b ##7 ENSGT01030000234531.A.b.b.b.e.a.b.a ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a #7 ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a #8 ENSGT01030000234531.A.b.b.b.e.a.a.b #9 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #14 ENSGT01030000234531.A.b.b.b.e.a.b.b #15 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00390000002770 #21 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 ENSGT00940000159957 #37 Rat MODERN SPECIES 15 Pramef17 (ENSRNOG00000042820) #7 RGD1306186 (ENSRNOG00000037039) #8 LOC120103107 (ENSRNOG00000047341) #9 Oog1 (ENSRNOG00000027142) #10 ENSRNOG00000065869 #11 Pramef5 (ENSRNOG00000067307) #12 Oog3 (ENSRNOG00000033000) #13 Pramef8 (ENSRNOG00000027278) #14 Pramef27 (ENSRNOG00000027328) #15 Lrrc38 (ENSRNOG00000015264) #16 Pdpn (ENSRNOG00000014961) #17 ENSRNOG00000070725 #18 LOC100359951 (ENSRNOG00000071148) #19 Prdm2 (ENSRNOG00000033522) #20 6330411D24Rik (ENSRNOG00000065736) #21 Kazn (ENSRNOG00000014322) #22 ENSRNOG00000070661 #23 Tmem51 (ENSRNOG00000014197) #24 Fhad1 (ENSRNOG00000028064) #25 Efhd2 (ENSRNOG00000013783) #26 Ctrc (ENSRNOG00000013745) #27 Cela2a (ENSRNOG00000013628) #28 Casp9 (ENSRNOG00000012944) #29 Dnajc16 (ENSRNOG00000012503) #30 Agmat (ENSRNOG00000012315) #31 Ddi2 (ENSRNOG00000012274) #32 Plekhm2 (ENSRNOG00000012163) #33 Tmem82 (ENSRNOG00000011970) #34 Fblim1 (ENSRNOG00000011774) #35 Spen (ENSRNOG00000033556) #36 Zbtb17 (ENSRNOG00000010436) #37 Mus ANCESTRAL SPECIES 3 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.e.b ##7 ENSGT01030000234531.A.b.b.b.e.a.b.a ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a #7 ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.b #8 ENSGT01030000234531.A.b.b.b.e.a.a.b #9 ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.a #8 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #14 ENSGT01030000234531.A.b.b.b.e.a.b.b #15 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00390000002770 #21 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 ENSGT00940000159957 #37 Mus_A ANCESTRAL SPECIES 3 ENSGT01030000234531.A.b.b.b.e.b ##7 ENSGT01030000234531.A.b.b.b.e.a.b.a ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a #7 ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.b #8 ENSGT01030000234531.A.b.b.b.e.a.a.b #9 ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.a #8 ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.a ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #14 ENSGT01030000234531.A.b.b.b.e.a.b.b #15 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00390000002770 #21 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 ENSGT00940000159957 #37 Mus_B ANCESTRAL SPECIES 5 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.e.b ##7 ENSGT01030000234531.A.b.b.b.e.a.b.a ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a.b ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a #7 ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.b #8 ENSGT01030000234531.A.b.b.b.e.a.a.b.a.a.b #9 ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.a ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #14 ENSGT01030000234531.A.b.b.b.e.a.b.b #15 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00390000002770 #21 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 ENSGT00940000159957 #37 Mus_C ANCESTRAL SPECIES 2 ENSGT00860000136337 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.e.b ##7 ENSGT01030000234531.A.b.b.b.e.a.b.a ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a.b ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a #7 ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.b #8 ENSGT01030000234531.A.b.b.b.e.a.a.b.a.a.b #9 ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.a ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #14 ENSGT01030000234531.A.b.b.b.e.a.b.b #15 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 ENSGT00940000159957 #37 spretus MODERN SPECIES 13 MGP_SPRETEiJ_G0027754 #9 MGP_SPRETEiJ_G0027753 #9 MGP_SPRETEiJ_G0027752 ##7 MGP_SPRETEiJ_G0027751 ##7 MGP_SPRETEiJ_G0027750 ##7 MGP_SPRETEiJ_G0027749 ##7 MGP_SPRETEiJ_G0027748 ##7 MGP_SPRETEiJ_G0027747 ##7 MGP_SPRETEiJ_G0027746 #9 Oog4 (MGP_SPRETEiJ_G0027745) ##7 Pramel12 (MGP_SPRETEiJ_G0027744) #14 Pramel1 (MGP_SPRETEiJ_G0027743) #15 Lrrc38 (MGP_SPRETEiJ_G0027742) #16 Pdpn (MGP_SPRETEiJ_G0027741) #17 Prdm2 (MGP_SPRETEiJ_G0027740) #20 Kazn (MGP_SPRETEiJ_G0027739) #22 Tmem51 (MGP_SPRETEiJ_G0027738) #24 Fhad1 (MGP_SPRETEiJ_G0027737) #25 Efhd2 (MGP_SPRETEiJ_G0027736) #26 MGP_SPRETEiJ_G0027735 Cela2a (MGP_SPRETEiJ_G0027734) #28 Casp9 (MGP_SPRETEiJ_G0027733) #29 Dnajc16 (MGP_SPRETEiJ_G0027732) #30 Agmat (MGP_SPRETEiJ_G0027731) #31 MGP_SPRETEiJ_G0027730 #32 MGP_SPRETEiJ_G0027729 #32 Plekhm2 (MGP_SPRETEiJ_G0027728) #33 Slc25a34 (MGP_SPRETEiJ_G0027727) Tmem82 (MGP_SPRETEiJ_G0027726) #34 Fblim1 (MGP_SPRETEiJ_G0027725) #35 Spen (MGP_SPRETEiJ_G0027724) #36 Steppe mouse MODERN SPECIES 3329 ENSMSIG00000015535 #9 Oog4 (ENSMSIG00000015458) ##7 Pramel12 (ENSMSIG00000015426) #14 Pramel1 (ENSMSIG00000015411) #15 ENSMSIG00000015393 #16 Pdpn (ENSMSIG00000015317) #17 ENSMSIG00000015307 Prdm2 (ENSMSIG00000015257) #20 ENSMSIG00000015235 ##22 Kazn (ENSMSIG00000015206) #22 ENSMSIG00000015199 Tmem51 (ENSMSIG00000015190) #24 Fhad1 (ENSMSIG00000014775) #25 Efhd2 (ENSMSIG00000014750) #26 ENSMSIG00000014707 #27 Cela2a (ENSMSIG00000014686) #28 Casp9 (ENSMSIG00000014653) #29 Dnajc16 (ENSMSIG00000014635) #30 Agmat (ENSMSIG00000014614) #31 ENSMSIG00000014561 #32 Plekhm2 (ENSMSIG00000014394) #33 Slc25a34 (ENSMSIG00000014377) Tmem82 (ENSMSIG00000014350) #34 Fblim1 (ENSMSIG00000014313) #35 Spen (ENSMSIG00000014208) #36 Mouse MODERN SPECIES 13 Pramel24 (ENSMUSG00000046435) #9 Pramel23 (ENSMUSG00000070617) #8 Pramel22 (ENSMUSG00000078513) #8 Pramel21 (ENSMUSG00000066688) #9 Pramel20 (ENSMUSG00000070618) ##7 Gm13057 (ENSMUSG00000096154) ##7 Gm13040 (ENSMUSG00000070616) ##7 Gm13043 (ENSMUSG00000095409) ##7 Oog4 (ENSMUSG00000047799) ##7 Pramel12 (ENSMUSG00000046862) #14 Pramel1 (ENSMUSG00000041805) #15 Lrrc38 (ENSMUSG00000028584) #16 Pdpn (ENSMUSG00000028583) #17 Prdm2 (ENSMUSG00000057637) #20 6330411D24Rik (ENSMUSG00000110067) #21 Kazn (ENSMUSG00000040606) #22 Tmem51 (ENSMUSG00000040616) #24 Fhad1 (ENSMUSG00000051435) #25 Efhd2 (ENSMUSG00000040659) #26 Ctrc (ENSMUSG00000062478) Cela2a (ENSMUSG00000058579) #28 Casp9 (ENSMUSG00000028914) #29 Dnajc16 (ENSMUSG00000040697) #30 Agmat (ENSMUSG00000040706) #31 Rsc1a1 (ENSMUSG00000040715) #32 Ddi2 (ENSMUSG00000078515) #32 Plekhm2 (ENSMUSG00000028917) #33 Slc25a34 (ENSMUSG00000040740) Tmem82 (ENSMUSG00000043085) #34 Fblim1 (ENSMUSG00000006219) #35 Spen (ENSMUSG00000040761) #36 Ryukyu mouse MODERN SPECIES 13 Aadacl4fm2 (MGP_CAROLIEiJ_G0026774) Aadacl4fm1 (MGP_CAROLIEiJ_G0026773) Aadacl3 (MGP_CAROLIEiJ_G0026772) MGP_CAROLIEiJ_G0026771 Cfap107 (MGP_CAROLIEiJ_G0026770) Pramel13 (MGP_CAROLIEiJ_G0026769) ##7 MGP_CAROLIEiJ_G0026768 #7 MGP_CAROLIEiJ_G0026767 #7 MGP_CAROLIEiJ_G0026766 ##7 Oog4 (MGP_CAROLIEiJ_G0026765) ##7 Pramel12 (MGP_CAROLIEiJ_G0026764) #14 Pramel1 (MGP_CAROLIEiJ_G0026763) #15 Lrrc38 (MGP_CAROLIEiJ_G0026762) #16 Pdpn (MGP_CAROLIEiJ_G0026761) #17 Prdm2 (MGP_CAROLIEiJ_G0026760) #20 Kazn (MGP_CAROLIEiJ_G0026759) #22 Tmem51 (MGP_CAROLIEiJ_G0026758) #24 Fhad1 (MGP_CAROLIEiJ_G0026757) #25 Efhd2 (MGP_CAROLIEiJ_G0026756) #26 MGP_CAROLIEiJ_G0026755 MGP_CAROLIEiJ_G0026754 #29 Dnajc16 (MGP_CAROLIEiJ_G0026753) #30 Agmat (MGP_CAROLIEiJ_G0026752) #31 MGP_CAROLIEiJ_G0026751 #32 MGP_CAROLIEiJ_G0026750 #32 Plekhm2 (MGP_CAROLIEiJ_G0026749) #33 Slc25a34 (MGP_CAROLIEiJ_G0026748) Tmem82 (MGP_CAROLIEiJ_G0026747) #34 Fblim1 (MGP_CAROLIEiJ_G0026746) #35 Spen (MGP_CAROLIEiJ_G0026745) #36 Zbtb17 (MGP_CAROLIEiJ_G0026744) #37 Shrew mouse MODERN SPECIES 19 Pramel15 (MGP_PahariEiJ_G0029106) ##7 MGP_PahariEiJ_G0029105 ##7 MGP_PahariEiJ_G0029104 ##7 MGP_PahariEiJ_G0029103 ##7 MGP_PahariEiJ_G0029102 ##7 MGP_PahariEiJ_G0029101 ##7 MGP_PahariEiJ_G0029100 ##7 MGP_PahariEiJ_G0029099 ##7 MGP_PahariEiJ_G0029098 #7 MGP_PahariEiJ_G0029097 #7 Pramel12 (MGP_PahariEiJ_G0029096) #14 Pramel1 (MGP_PahariEiJ_G0029095) #15 Lrrc38 (MGP_PahariEiJ_G0029094) #16 Pdpn (MGP_PahariEiJ_G0029093) #17 Prdm2 (MGP_PahariEiJ_G0029092) #20 Kazn (MGP_PahariEiJ_G0029091) #22 Tmem51 (MGP_PahariEiJ_G0029090) #24 Fhad1 (MGP_PahariEiJ_G0029089) #25 Efhd2 (MGP_PahariEiJ_G0029088) #26 MGP_PahariEiJ_G0029087 Cela2a (MGP_PahariEiJ_G0029086) #28 Casp9 (MGP_PahariEiJ_G0029085) #29 Dnajc16 (MGP_PahariEiJ_G0029084) #30 Agmat (MGP_PahariEiJ_G0029083) #31 MGP_PahariEiJ_G0029082 #32 MGP_PahariEiJ_G0029081 #32 Plekhm2 (MGP_PahariEiJ_G0029080) #33 Slc25a34 (MGP_PahariEiJ_G0029079) Tmem82 (MGP_PahariEiJ_G0029078) #34 Fblim1 (MGP_PahariEiJ_G0029077) #35 Spen (MGP_PahariEiJ_G0029076) #36 Cricetidae ANCESTRAL SPECIES 2 ENSGT00940000157630.a.a.a ENSGT00940000157630.a.a.b ENSGT00940000157630.a.b ENSGT00940000163565 ENSGT00940000157630.b.a ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.e.b ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b #7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #14 ENSGT01030000234531.A.b.b.b.e.a.b.b #15 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Cricetinae ANCESTRAL SPECIES 5 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630.a.a.b ENSGT00940000157630.a.b ENSGT00940000157630.b.b ENSGT00940000157630.b.a ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.e.b ##7 ENSGT01030000234531.A.b.b.b.e.a.b.a ##7 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #14 ENSGT01030000234531.A.b.b.b.e.a.b.b #15 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 726 Pramel12 (ENSMAUG00000013165) #14 Pramel1 (ENSMAUG00000017344) #15 Lrrc38 (ENSMAUG00000019684) #16 Pdpn (ENSMAUG00000013176) #17 Prdm2 (ENSMAUG00000017021) #20 ENSMAUG00000009108 #22 ENSMAUG00000010094 #22 Tmem51 (ENSMAUG00000007940) #24 Fhad1 (ENSMAUG00000001064) #25 Efhd2 (ENSMAUG00000001147) #26 ENSMAUG00000007283 #27 Cela2a (ENSMAUG00000010885) #28 Casp9 (ENSMAUG00000014326) #29 Dnajc16 (ENSMAUG00000021653) #30 Agmat (ENSMAUG00000022247) #31 ENSMAUG00000020325 Plekhm2 (ENSMAUG00000010838) #33 Slc25a34 (ENSMAUG00000020022) Tmem82 (ENSMAUG00000007567) #34 Fblim1 (ENSMAUG00000018139) #35 Spen (ENSMAUG00000008318) #36 Zbtb17 (ENSMAUG00000001376) #37 Golden Hamster MODERN SPECIES 726 Pramel12 (ENSMAUG00000013165) #14 Pramel1 (ENSMAUG00000017344) #15 Lrrc38 (ENSMAUG00000019684) #16 Pdpn (ENSMAUG00000013176) #17 Prdm2 (ENSMAUG00000017021) #20 ENSMAUG00000009108 #22 ENSMAUG00000010094 #22 Tmem51 (ENSMAUG00000007940) #24 Fhad1 (ENSMAUG00000001064) #25 Efhd2 (ENSMAUG00000001147) #26 ENSMAUG00000007283 #27 Cela2a (ENSMAUG00000010885) #28 Casp9 (ENSMAUG00000014326) #29 Dnajc16 (ENSMAUG00000021653) #30 Agmat (ENSMAUG00000022247) #31 ENSMAUG00000020325 Plekhm2 (ENSMAUG00000010838) #33 Slc25a34 (ENSMAUG00000020022) Tmem82 (ENSMAUG00000007567) #34 Fblim1 (ENSMAUG00000018139) #35 Spen (ENSMAUG00000008318) #36 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 111 Vps13d (ENSCGRG00001023868) Dhrs3 (ENSCGRG00001012549) Aadacl4fm4 (ENSCGRG00001018913) Aadacl4 (ENSCGRG00001021022) ENSCGRG00001024601 Aadacl4fm1 (ENSCGRG00001024757) Aadacl3 (ENSCGRG00001024964) Cfap107 (ENSCGRG00001025039) Pramel13 (ENSCGRG00001018269) ##7 Pramel15 (ENSCGRG00001024569) ##7 Pramel12 (ENSCGRG00001024998) #14 Pramel1 (ENSCGRG00001003207) #15 Lrrc38 (ENSCGRG00001015382) #16 Pdpn (ENSCGRG00001019750) #17 Prdm2 (ENSCGRG00001020470) #20 ENSCGRG00001022553 #22 Tmem51 (ENSCGRG00001023938) #24 ENSCGRG00001024256 #22 Fhad1 (ENSCGRG00001024955) #25 Efhd2 (ENSCGRG00001016692) #26 ENSCGRG00001018143 #27 ENSCGRG00001024391 #28 Casp9 (ENSCGRG00001012293) #29 Dnajc16 (ENSCGRG00001019382) #30 Agmat (ENSCGRG00001022077) #31 ENSCGRG00001024250 #32 Plekhm2 (ENSCGRG00001011209) #33 Slc25a34 (ENSCGRG00001021299) Tmem82 (ENSCGRG00001022720) #34 Fblim1 (ENSCGRG00001024160) #35 Spen (ENSCGRG00001007725) #36 Chinese hamster chok1gshd MODERN SPECIES 111 Aadacl4fm4 (ENSCGRG00001018913) Aadacl4 (ENSCGRG00001021022) ENSCGRG00001024601 Aadacl4fm1 (ENSCGRG00001024757) Aadacl3 (ENSCGRG00001024964) Cfap107 (ENSCGRG00001025039) Pramel13 (ENSCGRG00001018269) ##7 Pramel15 (ENSCGRG00001024569) ##7 Pramel12 (ENSCGRG00001024998) #14 Pramel1 (ENSCGRG00001003207) #15 Lrrc38 (ENSCGRG00001015382) #16 Pdpn (ENSCGRG00001019750) #17 Prdm2 (ENSCGRG00001020470) #20 ENSCGRG00001022553 #22 Tmem51 (ENSCGRG00001023938) #24 ENSCGRG00001024256 #22 Fhad1 (ENSCGRG00001024955) #25 Efhd2 (ENSCGRG00001016692) #26 ENSCGRG00001018143 #27 ENSCGRG00001024391 #28 Casp9 (ENSCGRG00001012293) #29 Dnajc16 (ENSCGRG00001019382) #30 Agmat (ENSCGRG00001022077) #31 ENSCGRG00001024250 #32 Plekhm2 (ENSCGRG00001011209) #33 Slc25a34 (ENSCGRG00001021299) Tmem82 (ENSCGRG00001022720) #34 Fblim1 (ENSCGRG00001024160) #35 Spen (ENSCGRG00001007725) #36 Zbtb17 (ENSCGRG00001019408) #37 Srarp (ENSCGRG00001024454) Cricetidae_B ANCESTRAL SPECIES 2 ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #14 ENSGT01030000234531.A.b.b.b.e.a.b.b #15 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 1 ENSMOCG00000005802 E330021D16Rik (ENSMOCG00000006042) Usp9x (ENSMOCG00000009609) ENSMOCG00000008046 Ddx3x (ENSMOCG00000014170) Nyx (ENSMOCG00000018188) Cask (ENSMOCG00000007637) Gpr34 (ENSMOCG00000016433) Gpr82 (ENSMOCG00000003874) ENSMOCG00000016039 Lrrc38 (ENSMOCG00000014237) #16 ENSMOCG00000015618 ENSMOCG00000018838 ENSMOCG00000021077 #20 ENSMOCG00000002830 #22 ENSMOCG00000007192 #22 Tmem51 (ENSMOCG00000009847) #24 Fhad1 (ENSMOCG00000015308) #25 Efhd2 (ENSMOCG00000002945) #26 ENSMOCG00000006919 #27 Cela2a (ENSMOCG00000019141) #28 Casp9 (ENSMOCG00000020323) #29 Dnajc16 (ENSMOCG00000018345) #30 Agmat (ENSMOCG00000006579) #31 ENSMOCG00000008741 Plekhm2 (ENSMOCG00000016353) #33 Slc25a34 (ENSMOCG00000001770) Tmem82 (ENSMOCG00000004076) #34 Spen (ENSMOCG00000016083) #36 Zbtb17 (ENSMOCG00000005017) #37 Hspb7 (ENSMOCG00000015401) Prairie vole MODERN SPECIES 1 ENSMOCG00000016742 ENSMOCG00000005802 E330021D16Rik (ENSMOCG00000006042) Usp9x (ENSMOCG00000009609) ENSMOCG00000008046 Ddx3x (ENSMOCG00000014170) Nyx (ENSMOCG00000018188) Cask (ENSMOCG00000007637) Gpr34 (ENSMOCG00000016433) Gpr82 (ENSMOCG00000003874) ENSMOCG00000016039 Lrrc38 (ENSMOCG00000014237) #16 ENSMOCG00000015618 ENSMOCG00000018838 ENSMOCG00000021077 #20 ENSMOCG00000002830 #22 ENSMOCG00000007192 #22 Tmem51 (ENSMOCG00000009847) #24 Fhad1 (ENSMOCG00000015308) #25 Efhd2 (ENSMOCG00000002945) #26 ENSMOCG00000006919 #27 Cela2a (ENSMOCG00000019141) #28 Casp9 (ENSMOCG00000020323) #29 Dnajc16 (ENSMOCG00000018345) #30 Agmat (ENSMOCG00000006579) #31 ENSMOCG00000008741 Plekhm2 (ENSMOCG00000016353) #33 Slc25a34 (ENSMOCG00000001770) Tmem82 (ENSMOCG00000004076) #34 Spen (ENSMOCG00000016083) #36 Zbtb17 (ENSMOCG00000005017) #37 Northern American deer mouse MODERN SPECIES 11 Pank4 (ENSPEMG00000018726) Hes5 (ENSPEMG00000031266) Tnfrsf14 (ENSPEMG00000016250) Prxl2b (ENSPEMG00000016639) Mmel1 (ENSPEMG00000015360) ENSPEMG00000003914 Actrt2 (ENSPEMG00000014225) ENSPEMG00000027963 Pramel12 (ENSPEMG00000023636) #14 ENSPEMG00000025426 ##7 Pramel1 (ENSPEMG00000021753) #15 Lrrc38 (ENSPEMG00000027448) #16 Pdpn (ENSPEMG00000007524) #17 Prdm2 (ENSPEMG00000023130) #20 ENSPEMG00000028452 ##22 Kazn (ENSPEMG00000021311) #22 Tmem51 (ENSPEMG00000031341) #24 Fhad1 (ENSPEMG00000005222) #25 Efhd2 (ENSPEMG00000001500) #26 ENSPEMG00000009764 #28 Cela2a (ENSPEMG00000023249) #28 Casp9 (ENSPEMG00000022246) #29 Dnajc16 (ENSPEMG00000023576) #30 Agmat (ENSPEMG00000022206) #31 ENSPEMG00000021491 ENSPEMG00000029595 #32 Plekhm2 (ENSPEMG00000024198) #33 Slc25a34 (ENSPEMG00000009951) Tmem82 (ENSPEMG00000021877) #34 Fblim1 (ENSPEMG00000022333) #35 Spen (ENSPEMG00000022997) #36 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1803 ENSNGAG00000013647 #22 ENSNGAG00000018275 #22 Tmem51 (ENSNGAG00000012512) #24 Fhad1 (ENSNGAG00000002450) #25 Efhd2 (ENSNGAG00000018634) #26 ENSNGAG00000020581 #27 Cela2a (ENSNGAG00000019296) #28 Casp9 (ENSNGAG00000003405) #29 Dnajc16 (ENSNGAG00000013158) #30 Agmat (ENSNGAG00000006410) #31 ENSNGAG00000008573 ENSNGAG00000011605 #32 Plekhm2 (ENSNGAG00000018802) #33 Slc25a34 (ENSNGAG00000019484) Tmem82 (ENSNGAG00000020347) #34 Fblim1 (ENSNGAG00000017164) #35 Upper Galilee mountains blind mole rat MODERN SPECIES 1803 ENSNGAG00000013647 #22 ENSNGAG00000018275 #22 Tmem51 (ENSNGAG00000012512) #24 Fhad1 (ENSNGAG00000002450) #25 Efhd2 (ENSNGAG00000018634) #26 ENSNGAG00000020581 #27 Cela2a (ENSNGAG00000019296) #28 Casp9 (ENSNGAG00000003405) #29 Dnajc16 (ENSNGAG00000013158) #30 Agmat (ENSNGAG00000006410) #31 ENSNGAG00000008573 ENSNGAG00000011605 #32 Plekhm2 (ENSNGAG00000018802) #33 Slc25a34 (ENSNGAG00000019484) Tmem82 (ENSNGAG00000020347) #34 Fblim1 (ENSNGAG00000017164) #35 Spen (ENSNGAG00000000641) #36 Lesser Egyptian jerboa MODERN SPECIES 63 Tnfrsf1b (ENSJJAG00000010813) Vps13d (ENSJJAG00000013581) Dhrs3 (ENSJJAG00000010964) ENSJJAG00000011214 ENSJJAG00000010939 ENSJJAG00000009632 Aadacl4fm1 (ENSJJAG00000011655) Aadacl3 (ENSJJAG00000011110) Cfap107 (ENSJJAG00000012706) ENSJJAG00000013886 ##7 ENSJJAG00000011316 ##7 ENSJJAG00000007952 ##7 Lrrc38 (ENSJJAG00000010300) #16 Pdpn (ENSJJAG00000011298) #17 Prdm2 (ENSJJAG00000013245) #20 Kazn (ENSJJAG00000013027) #22 Tmem51 (ENSJJAG00000007750) #24 Fhad1 (ENSJJAG00000011545) #25 Efhd2 (ENSJJAG00000005238) #26 ENSJJAG00000011961 #27 Cela2a (ENSJJAG00000012004) #28 ENSJJAG00000010832 Dnajc16 (ENSJJAG00000007639) #30 Agmat (ENSJJAG00000000771) #31 ENSJJAG00000008758 ENSJJAG00000002222 #32 Plekhm2 (ENSJJAG00000009735) #33 Slc25a34 (ENSJJAG00000001837) Tmem82 (ENSJJAG00000011441) #34 Fblim1 (ENSJJAG00000013123) #35 Spen (ENSJJAG00000010882) #36 Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 380 Fam151a (ENSDORG00000013808) Acot11 (ENSDORG00000013806) Ssbp3 (ENSDORG00000002296) Mrpl37 (ENSDORG00000002294) Cyb5rl (ENSDORG00000002291) Cdcp2 (ENSDORG00000002289) Tceanc2 (ENSDORG00000029310) ENSDORG00000002286 Ldlrad1 (ENSDORG00000002283) Lrrc42 (ENSDORG00000004216) Hspb11 (ENSDORG00000015267) Dio1 (ENSDORG00000015264) Yipf1 (ENSDORG00000015262) ENSDORG00000011209 #17 Prdm2 (ENSDORG00000012558) #20 ENSDORG00000016542 #22 ENSDORG00000023515 #22 Tmem51 (ENSDORG00000015453) #24 Fhad1 (ENSDORG00000005392) #25 Efhd2 (ENSDORG00000026861) #26 ENSDORG00000016574 #27 Cela2a (ENSDORG00000006593) #28 ENSDORG00000003973 Dnajc16 (ENSDORG00000003972) #30 Agmat (ENSDORG00000003970) #31 ENSDORG00000012305 ENSDORG00000027846 #32 Plekhm2 (ENSDORG00000008849) #33 Slc25a34 (ENSDORG00000008853) Tmem82 (ENSDORG00000008854) #34 Fblim1 (ENSDORG00000002591) #35 Kangaroo rat MODERN SPECIES 380 Acot11 (ENSDORG00000013806) Ssbp3 (ENSDORG00000002296) Mrpl37 (ENSDORG00000002294) Cyb5rl (ENSDORG00000002291) Cdcp2 (ENSDORG00000002289) Tceanc2 (ENSDORG00000029310) ENSDORG00000002286 Ldlrad1 (ENSDORG00000002283) Lrrc42 (ENSDORG00000004216) Hspb11 (ENSDORG00000015267) Dio1 (ENSDORG00000015264) Yipf1 (ENSDORG00000015262) ENSDORG00000011209 #17 Prdm2 (ENSDORG00000012558) #20 ENSDORG00000016542 #22 ENSDORG00000023515 #22 Tmem51 (ENSDORG00000015453) #24 Fhad1 (ENSDORG00000005392) #25 Efhd2 (ENSDORG00000026861) #26 ENSDORG00000016574 #27 Cela2a (ENSDORG00000006593) #28 ENSDORG00000003973 Dnajc16 (ENSDORG00000003972) #30 Agmat (ENSDORG00000003970) #31 ENSDORG00000012305 ENSDORG00000027846 #32 Plekhm2 (ENSDORG00000008849) #33 Slc25a34 (ENSDORG00000008853) Tmem82 (ENSDORG00000008854) #34 Fblim1 (ENSDORG00000002591) #35 Spen (ENSDORG00000023909) #36 Rodentia_A ANCESTRAL SPECIES ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.e.b ##7 ENSGT01030000234531.A.b.b.b.f ##7 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00390000002770 #21 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Sciuridae ANCESTRAL SPECIES 3 ENSGT01030000234558.A.a.a.b ENSGT00390000013727.c ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.f.b.b ##7 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Marmotini ANCESTRAL SPECIES ENSGT00390000007643 ENSGT01030000234558.A.a.a.b ENSGT00390000013727.c ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630.c ENSGT00940000162160 ENSGT00390000014553 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Marmotini_b ANCESTRAL SPECIES ENSGT00390000007643 ENSGT01030000234558.A.a.a.b ENSGT00390000013727.c ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630.c ENSGT00940000162160 ENSGT00390000014553 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00940000154570.a.b ##22 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Squirrel DUPLICATION Squirrel MODERN SPECIES 74 NPPB (ENSSTOG00000020778) KIAA2013 (ENSSTOG00000027586) PLOD1 (ENSSTOG00000009927) MFN2 (ENSSTOG00000005705) MIIP (ENSSTOG00000024734) TNFRSF1B (ENSSTOG00000024605) VPS13D (ENSSTOG00000005519) DHRS3 (ENSSTOG00000016015) AADACL4 (ENSSTOG00000019534) AADACL3 (ENSSTOG00000007059) CFAP107 (ENSSTOG00000009816) LRRC38 (ENSSTOG00000023111) #16 PDPN (ENSSTOG00000032629) #17 PRDM2 (ENSSTOG00000019848) #20 ENSSTOG00000023112 #22 ENSSTOG00000030433 #22 TMEM51 (ENSSTOG00000020167) #24 FHAD1 (ENSSTOG00000023646) #25 EFHD2 (ENSSTOG00000025403) #26 ENSSTOG00000032931 #27 ENSSTOG00000021532 #28 ENSSTOG00000028042 DNAJC16 (ENSSTOG00000013804) #30 AGMAT (ENSSTOG00000013813) #31 DDI2 (ENSSTOG00000019447) RSC1A1 (ENSSTOG00000025982) #32 PLEKHM2 (ENSSTOG00000013821) #33 SLC25A34 (ENSSTOG00000013833) TMEM82 (ENSSTOG00000025954) #34 FBLIM1 (ENSSTOG00000028645) #35 ENSSTOG00000029207 Squirrel MODERN SPECIES 74 ENSSTOG00000007663 NPPB (ENSSTOG00000020778) KIAA2013 (ENSSTOG00000027586) PLOD1 (ENSSTOG00000009927) MFN2 (ENSSTOG00000005705) MIIP (ENSSTOG00000024734) TNFRSF1B (ENSSTOG00000024605) VPS13D (ENSSTOG00000005519) DHRS3 (ENSSTOG00000016015) AADACL4 (ENSSTOG00000019534) AADACL3 (ENSSTOG00000007059) CFAP107 (ENSSTOG00000009816) LRRC38 (ENSSTOG00000023111) #16 PDPN (ENSSTOG00000032629) #17 PRDM2 (ENSSTOG00000019848) #20 ENSSTOG00000023112 #22 ENSSTOG00000030433 #22 TMEM51 (ENSSTOG00000020167) #24 FHAD1 (ENSSTOG00000023646) #25 EFHD2 (ENSSTOG00000025403) #26 ENSSTOG00000032931 #27 ENSSTOG00000021532 #28 ENSSTOG00000028042 DNAJC16 (ENSSTOG00000013804) #30 AGMAT (ENSSTOG00000013813) #31 DDI2 (ENSSTOG00000019447) RSC1A1 (ENSSTOG00000025982) #32 PLEKHM2 (ENSSTOG00000013821) #33 SLC25A34 (ENSSTOG00000013833) TMEM82 (ENSSTOG00000025954) #34 FBLIM1 (ENSSTOG00000028645) #35 Arctic ground squirrel MODERN SPECIES 451 LRRC38 (ENSUPAG00010007763) #16 PDPN (ENSUPAG00010007766) #17 PRDM2 (ENSUPAG00010007769) #20 ENSUPAG00010007797 ##22 KAZN (ENSUPAG00010007804) #22 TMEM51 (ENSUPAG00010007834) #24 FHAD1 (ENSUPAG00010007841) #25 EFHD2 (ENSUPAG00010007892) #26 Alpin marmot MODERN SPECIES 15 LRRC38 (ENSMMMG00000021887) #16 ENSMMMG00000021882 #17 PRDM2 (ENSMMMG00000021858) #20 KAZN (ENSMMMG00000021835) #22 TMEM51 (ENSMMMG00000021802) #24 FHAD1 (ENSMMMG00000021774) #25 EFHD2 (ENSMMMG00000021754) #26 ENSMMMG00000021744 #28 CASP9 (ENSMMMG00000021730) #29 DNAJC16 (ENSMMMG00000021719) #30 AGMAT (ENSMMMG00000021713) #31 DDI2 (ENSMMMG00000021707) PLEKHM2 (ENSMMMG00000021689) #33 SLC25A34 (ENSMMMG00000021668) TMEM82 (ENSMMMG00000021661) #34 FBLIM1 (ENSMMMG00000021649) #35 ENSMMMG00000021647 ZBTB17 (ENSMMMG00000021636) #37 SRARP (ENSMMMG00000021634) Eurasian red squirrel MODERN SPECIES MFN2 (ENSSVLG00005006764) MIIP (ENSSVLG00005006797) TNFRSF8 (ENSSVLG00005006831) ENSSVLG00005006934 TNFRSF1B (ENSSVLG00005006983) VPS13D (ENSSVLG00005007158) DHRS3 (ENSSVLG00005007738) ENSSVLG00005007795 ENSSVLG00005007846 AADACL3 (ENSSVLG00005007922) CFAP107 (ENSSVLG00005007956) ENSSVLG00005008079 ##7 LRRC38 (ENSSVLG00005008488) #16 PDPN (ENSSVLG00005008527) #17 PRDM2 (ENSSVLG00005008674) #20 KAZN (ENSSVLG00005008929) #22 TMEM51 (ENSSVLG00005009207) #24 FHAD1 (ENSSVLG00005009255) #25 EFHD2 (ENSSVLG00005009504) #26 CTRC (ENSSVLG00005009531) #27 ENSSVLG00005009617 #28 ENSSVLG00005009810 #28 ENSSVLG00005009886 DNAJC16 (ENSSVLG00005009925) #30 ENSSVLG00005009978 AGMAT (ENSSVLG00005010003) #31 DDI2 (ENSSVLG00005010074) RSC1A1 (ENSSVLG00005010092) #32 PLEKHM2 (ENSSVLG00005010150) #33 SLC25A34 (ENSSVLG00005010194) TMEM82 (ENSSVLG00005010237) #34 Hystricomorpha ANCESTRAL SPECIES 4 ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630.h ENSGT00940000157630.g.a ENSGT00940000157630.g.b ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.e.b.c ##7 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000170582 ENSGT00940000159410 #20 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Naked mole-rat female MODERN SPECIES 26 ENSHGLG00000007958 TCEANC2 (ENSHGLG00000046573) ENSHGLG00000043225 LRRC42 (ENSHGLG00000000742) ENSHGLG00000001352 ENSHGLG00000040583 ENSHGLG00000042903 ENSHGLG00000046232 NDC1 (ENSHGLG00000001547) ENSHGLG00000041952 LRP8 (ENSHGLG00000001818) ENSHGLG00000001648 ENSHGLG00000002034 CPT2 (ENSHGLG00000003070) ENSHGLG00000035804 ENSHGLG00000009940 #22 TMEM51 (ENSHGLG00000013366) #24 FHAD1 (ENSHGLG00000018196) #25 EFHD2 (ENSHGLG00000046486) #26 CTRC (ENSHGLG00000018486) #27 ENSHGLG00000016895 #28 CASP9 (ENSHGLG00000019310) #29 DNAJC16 (ENSHGLG00000014574) #30 AGMAT (ENSHGLG00000007473) #31 ENSHGLG00000038027 #32 PLEKHM2 (ENSHGLG00000007190) #33 SLC25A34 (ENSHGLG00000032560) TMEM82 (ENSHGLG00000011424) #34 FBLIM1 (ENSHGLG00000019134) #35 ENSHGLG00000014407 SPEN (ENSHGLG00000032487) #36 Hystricomorpha_a ANCESTRAL SPECIES 1 ENSGT01030000234558.A.a.a.b ENSGT00390000013727.c ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630.h ENSGT00940000157630.g.a ENSGT00940000157630.g.b ENSGT00940000162160 ENSGT00390000014553 ENSGT00940000162571 #16 ENSGT00940000170582 ENSGT00940000159410 #20 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Hystricomorpha_b ANCESTRAL SPECIES 7 ENSGT00940000162571 #16 ENSGT00940000170582 ENSGT00940000159410 #20 ENSGT00940000154570.b #22 ENSGT00390000009278 #24 ENSGT00940000154171.A #25 ENSGT00390000012058.c.b #26 ENSGT00940000153216.a.b #27 ENSGT01030000234528.B.a.a #28 ENSGT00940000159698 #29 ENSGT00940000155851 #30 ENSGT00950000183195.a #31 ENSGT00950000182999.a.a ENSGT00390000005744 #32 ENSGT00390000015175 #33 ENSGT00940000160016 ENSGT00500000045021 #34 ENSGT00940000159003 #35 ENSGT00940000157087.a.b #36 Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 234 LRRC38 (ENSCLAG00000002559) #16 ENSCLAG00000002299 PRDM2 (ENSCLAG00000004362) #20 ENSCLAG00000003967 #22 ENSCLAG00000003684 #22 TMEM51 (ENSCLAG00000003533) #24 FHAD1 (ENSCLAG00000012202) #25 EFHD2 (ENSCLAG00000014606) #26 CTRC (ENSCLAG00000010834) #27 ENSCLAG00000010512 #28 CASP9 (ENSCLAG00000003082) #29 DNAJC16 (ENSCLAG00000002114) #30 AGMAT (ENSCLAG00000004055) #31 ENSCLAG00000003693 #32 PLEKHM2 (ENSCLAG00000003128) #33 SLC25A34 (ENSCLAG00000002647) TMEM82 (ENSCLAG00000004347) #34 FBLIM1 (ENSCLAG00000003668) #35 SPEN (ENSCLAG00000002018) #36 Long-tailed chinchilla MODERN SPECIES 234 LRRC38 (ENSCLAG00000002559) #16 ENSCLAG00000002299 PRDM2 (ENSCLAG00000004362) #20 ENSCLAG00000003967 #22 ENSCLAG00000003684 #22 TMEM51 (ENSCLAG00000003533) #24 FHAD1 (ENSCLAG00000012202) #25 EFHD2 (ENSCLAG00000014606) #26 CTRC (ENSCLAG00000010834) #27 ENSCLAG00000010512 #28 CASP9 (ENSCLAG00000003082) #29 DNAJC16 (ENSCLAG00000002114) #30 AGMAT (ENSCLAG00000004055) #31 ENSCLAG00000003693 #32 PLEKHM2 (ENSCLAG00000003128) #33 SLC25A34 (ENSCLAG00000002647) TMEM82 (ENSCLAG00000004347) #34 FBLIM1 (ENSCLAG00000003668) #35 SPEN (ENSCLAG00000002018) #36 ZBTB17 (ENSCLAG00000006044) #37 Degu DUPLICATION Degu MODERN SPECIES 133 PRDM2 (ENSODEG00000017400) #20 ENSODEG00000016425 #22 ENSODEG00000016473 #22 TMEM51 (ENSODEG00000016454) #24 FHAD1 (ENSODEG00000016605) #25 EFHD2 (ENSODEG00000016306) #26 CTRC (ENSODEG00000016340) #27 ENSODEG00000020480 ENSODEG00000016581 #28 ENSODEG00000016480 DNAJC16 (ENSODEG00000016313) #30 AGMAT (ENSODEG00000016792) #31 DDI2 (ENSODEG00000016549) RSC1A1 (ENSODEG00000016320) #32 PLEKHM2 (ENSODEG00000016981) #33 SLC25A34 (ENSODEG00000016800) TMEM82 (ENSODEG00000016458) #34 Degu MODERN SPECIES 133 PRDM2 (ENSODEG00000017400) #20 ENSODEG00000016425 #22 ENSODEG00000016473 #22 TMEM51 (ENSODEG00000016454) #24 FHAD1 (ENSODEG00000016605) #25 EFHD2 (ENSODEG00000016306) #26 CTRC (ENSODEG00000016340) #27 ENSODEG00000020480 ENSODEG00000016581 #28 ENSODEG00000016480 DNAJC16 (ENSODEG00000016313) #30 AGMAT (ENSODEG00000016792) #31 DDI2 (ENSODEG00000016549) RSC1A1 (ENSODEG00000016320) #32 PLEKHM2 (ENSODEG00000016981) #33 SLC25A34 (ENSODEG00000016800) TMEM82 (ENSODEG00000016458) #34 FBLIM1 (ENSODEG00000016558) #35 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 25 PLOD1 (ENSCPOG00000020909) MFN2 (ENSCPOG00000006834) MIIP (ENSCPOG00000032652) ENSCPOG00000009191 TNFRSF1B (ENSCPOG00000020299) VPS13D (ENSCPOG00000010440) DHRS3 (ENSCPOG00000001600) ENSCPOG00000010237 ENSCPOG00000015038 ENSCPOG00000011374 AADACL3 (ENSCPOG00000000228) CFAP107 (ENSCPOG00000003643) LRRC38 (ENSCPOG00000031681) #16 ENSCPOG00000038973 PRDM2 (ENSCPOG00000038436) #20 ENSCPOG00000007591 #22 ENSCPOG00000035462 #22 TMEM51 (ENSCPOG00000035704) #24 FHAD1 (ENSCPOG00000014449) #25 EFHD2 (ENSCPOG00000022076) #26 CTRC (ENSCPOG00000034507) #27 ENSCPOG00000039418 #28 ENSCPOG00000038747 #28 CASP9 (ENSCPOG00000012051) #29 DNAJC16 (ENSCPOG00000012059) #30 AGMAT (ENSCPOG00000026931) #31 DDI2 (ENSCPOG00000020885) RSC1A1 (ENSCPOG00000012066) #32 PLEKHM2 (ENSCPOG00000012069) #33 SLC25A34 (ENSCPOG00000012078) TMEM82 (ENSCPOG00000012084) #34 Guinea pig MODERN SPECIES 25 MFN2 (ENSCPOG00000006834) MIIP (ENSCPOG00000032652) ENSCPOG00000009191 TNFRSF1B (ENSCPOG00000020299) VPS13D (ENSCPOG00000010440) DHRS3 (ENSCPOG00000001600) ENSCPOG00000010237 ENSCPOG00000015038 ENSCPOG00000011374 AADACL3 (ENSCPOG00000000228) CFAP107 (ENSCPOG00000003643) LRRC38 (ENSCPOG00000031681) #16 ENSCPOG00000038973 PRDM2 (ENSCPOG00000038436) #20 ENSCPOG00000007591 #22 ENSCPOG00000035462 #22 TMEM51 (ENSCPOG00000035704) #24 FHAD1 (ENSCPOG00000014449) #25 EFHD2 (ENSCPOG00000022076) #26 CTRC (ENSCPOG00000034507) #27 ENSCPOG00000039418 #28 ENSCPOG00000038747 #28 CASP9 (ENSCPOG00000012051) #29 DNAJC16 (ENSCPOG00000012059) #30 AGMAT (ENSCPOG00000026931) #31 DDI2 (ENSCPOG00000020885) RSC1A1 (ENSCPOG00000012066) #32 PLEKHM2 (ENSCPOG00000012069) #33 SLC25A34 (ENSCPOG00000012078) TMEM82 (ENSCPOG00000012084) #34 FBLIM1 (ENSCPOG00000024867) #35 Lagomorpha ANCESTRAL SPECIES 140 ENSGT01030000234558.A.a.a.b ENSGT00390000013727.c ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.c #7 ENSGT00940000162571 #16 ENSGT00390000000013 #17 ENSGT00940000159410 #20 ENSGT00390000002770 #21 ENSGT00940000154570.b #22 Pika MODERN SPECIES 4282 KAZN (ENSOPRG00000008867) #22 ENSOPRG00000008955 Rabbit DUPLICATION Rabbit MODERN SPECIES 472 TNFRSF8 (ENSOCUG00000015925) TNFRSF1B (ENSOCUG00000014127) VPS13D (ENSOCUG00000005551) ENSOCUG00000029199 ENSOCUG00000003422 ENSOCUG00000026490 AADACL3 (ENSOCUG00000025025) CFAP107 (ENSOCUG00000007517) ENSOCUG00000008348 #7 LRRC38 (ENSOCUG00000010759) #16 PDPN (ENSOCUG00000005899) #17 ENSOCUG00000030212 PRDM2 (ENSOCUG00000009605) #20 ENSOCUG00000028991 #21 ENSOCUG00000017106 #22 ENSOCUG00000033717 #22 Rabbit MODERN SPECIES 472 ENSOCUG00000003525 TNFRSF8 (ENSOCUG00000015925) TNFRSF1B (ENSOCUG00000014127) VPS13D (ENSOCUG00000005551) ENSOCUG00000029199 ENSOCUG00000003422 ENSOCUG00000026490 AADACL3 (ENSOCUG00000025025) CFAP107 (ENSOCUG00000007517) ENSOCUG00000008348 #7 LRRC38 (ENSOCUG00000010759) #16 PDPN (ENSOCUG00000005899) #17 ENSOCUG00000030212 PRDM2 (ENSOCUG00000009605) #20 ENSOCUG00000028991 #21 ENSOCUG00000017106 #22 ENSOCUG00000033717 #22 Tree shrew MODERN SPECIES 4846 KAZN (ENSTBEG00000001870) #22 ENSTBEG00000002855 TMEM51 (ENSTBEG00000004964) #24