Boreoeutheria	ANCESTRAL SPECIES		ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Carnivora	ANCESTRAL SPECIES	1	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37
Caniformia	ANCESTRAL SPECIES	2	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000170703.b	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37
Mustelinae	ANCESTRAL SPECIES		ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800.c #9	ENSGT00950000183083.b #10	ENSGT00940000170703.b	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744.c #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37
Ferret	MODERN SPECIES	167	MIIP (ENSMPUG00000016386) #7	TNFRSF8 (ENSMPUG00000016383) #8	TNFRSF1B (ENSMPUG00000016381) #9	VPS13D (ENSMPUG00000016376) #10	ENSMPUG00000016374 #11	ENSMPUG00000016373 #12	DHRS3 (ENSMPUG00000016371) #13	AADACL4 (ENSMPUG00000016369) #14	AADACL3 (ENSMPUG00000016368) #15	CFAP107 (ENSMPUG00000016365) #16	ENSMPUG00000016357 #17	LRRC38 (ENSMPUG00000016355) #18	PDPN (ENSMPUG00000016354) #19	ENSMPUG00000016353 #20	PRDM2 (ENSMPUG00000016352) #21	KAZN (ENSMPUG00000016351) #22	TMEM51 (ENSMPUG00000016350) #23	FHAD1 (ENSMPUG00000016348) #24	EFHD2 (ENSMPUG00000016346) #25	CTRC (ENSMPUG00000016345) #26	CASP9 (ENSMPUG00000016342) #27	DNAJC16 (ENSMPUG00000016341) #28	AGMAT (ENSMPUG00000016340) #29	DDI2 (ENSMPUG00000016332) #30	RSC1A1 (ENSMPUG00000018833) #31	PLEKHM2 (ENSMPUG00000016329) #32	SLC25A34 (ENSMPUG00000016326) #33	TMEM82 (ENSMPUG00000016323) #34	FBLIM1 (ENSMPUG00000016318) #35	SPEN (ENSMPUG00000016317) #36	ZBTB17 (ENSMPUG00000016313) #37
American mink	MODERN SPECIES	9	MFN2 (ENSNVIG00000010611)	MIIP (ENSNVIG00000010630) #7	TNFRSF8 (ENSNVIG00000010646) #8	ENSNVIG00000010660 #9	ENSNVIG00000010689 ##9	VPS13D (ENSNVIG00000010731) #10	ENSNVIG00000010956	DHRS3 (ENSNVIG00000010957) #13	ADCL4 (ENSNVIG00000010972) #14	AADACL3 (ENSNVIG00000010988) #15	CFAP107 (ENSNVIG00000010992) #16	LRRC38 (ENSNVIG00000011014) #18	PDPN (ENSNVIG00000011020) #19	PRDM2 (ENSNVIG00000011077) #21	ENSNVIG00000011151	KAZN (ENSNVIG00000011169) #22	TMEM51 (ENSNVIG00000011243) #23	FHAD1 (ENSNVIG00000011294) #24	EFHD2 (ENSNVIG00000011427) #25	CTRC (ENSNVIG00000011438) #26	CASP9 (ENSNVIG00000011449) #27	DJC16 (ENSNVIG00000011474) #28	AGMAT (ENSNVIG00000011545) #29	DDI2 (ENSNVIG00000011569) #30	ENSNVIG00000011620 #31	PLEKHM2 (ENSNVIG00000011636) #32	SLC25A34 (ENSNVIG00000011676) #33	TMEM82 (ENSNVIG00000011685) #34	FBLI1 (ENSNVIG00000011696) #35	SPEN (ENSNVIG00000011765) #36	ZBTB17 (ENSNVIG00000011847) #37
Ursidae	ANCESTRAL SPECIES		ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000170703.b	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37	ENSGT00390000000265
Ursus	ANCESTRAL SPECIES		ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT00940000162571 #18	ENSGT00940000163979	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957.y #37	ENSGT00390000000265
American black bear	MODERN SPECIES	1361																KAZN (ENSUAMG00000007169) #22
Polar bear	MODERN SPECIES	189	NPPB (ENSUMAG00000022754)	PLOD1 (ENSUMAG00000022265)	MFN2 (ENSUMAG00000022141)	MIIP (ENSUMAG00000022126) #7	TNFRSF8 (ENSUMAG00000022114) #8	ENSUMAG00000022101 #9	ENSUMAG00000022092	VPS13D (ENSUMAG00000021837) #10	DHRS3 (ENSUMAG00000021788) #13	AADACL4 (ENSUMAG00000021786) #14	AADACL3 (ENSUMAG00000021783) #15	CFAP107 (ENSUMAG00000021780) #16	ENSUMAG00000021779	ENSUMAG00000021778 #19	PRDM2 (ENSUMAG00000021770) #21	KAZN (ENSUMAG00000021744) #22	ENSUMAG00000021738 #23	FHAD1 (ENSUMAG00000021726) #24	EFHD2 (ENSUMAG00000021718) #25	CTRC (ENSUMAG00000021713) #26	CASP9 (ENSUMAG00000021709) #27	DNAJC16 (ENSUMAG00000021707) #28	AGMAT (ENSUMAG00000021705) #29	ENSUMAG00000021700 #31	PLEKHM2 (ENSUMAG00000021666) #32	SLC25A34 (ENSUMAG00000021659) #33	FBLIM1 (ENSUMAG00000021656) #35	SPEN (ENSUMAG00000021641) #36	ENSUMAG00000021628 #37	SRARP (ENSUMAG00000021624)	HSPB7 (ENSUMAG00000021617)
Giant Panda	MODERN SPECIES	2	KIAA2013 (ENSAMEG00000009882)	PLOD1 (ENSAMEG00000009887)	MFN2 (ENSAMEG00000010033)	MIIP (ENSAMEG00000010114) #7	TNFRSF8 (ENSAMEG00000010132) #8	TNFRSF1B (ENSAMEG00000010153) #9	VPS13D (ENSAMEG00000010179) #10	ENSAMEG00000000611	DHRS3 (ENSAMEG00000006744) #13	AADACL4 (ENSAMEG00000006740) #14	AADACL3 (ENSAMEG00000030191) #15	CFAP107 (ENSAMEG00000006730) #16	LRRC38 (ENSAMEG00000006725) #18	PDPN (ENSAMEG00000029968) #19	PRDM2 (ENSAMEG00000006714) #21	KAZN (ENSAMEG00000011994) #22	TMEM51 (ENSAMEG00000027328) #23	FHAD1 (ENSAMEG00000011967) #24	ENSAMEG00000027158 #25	ENSAMEG00000011940 #26	ENSAMEG00000011912 #27	ENSAMEG00000011891 #28	AGMAT (ENSAMEG00000011881) #29	ENSAMEG00000018736 #31	PLEKHM2 (ENSAMEG00000011853) #32	SLC25A34 (ENSAMEG00000011844) #33	TMEM82 (ENSAMEG00000011841) #34	FBLIM1 (ENSAMEG00000011829) #35	SPEN (ENSAMEG00000011817) #36	ENSAMEG00000030804 #37	SRARP (ENSAMEG00000030564)
Canidae	ANCESTRAL SPECIES	14	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215.c #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT01040000241632	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37
Red fox	MODERN SPECIES	88	MIIP (ENSVVUG00000028595) #8	TNFRSF1B (ENSVVUG00000028616) #9	VPS13D (ENSVVUG00000028650) #10	ENSVVUG00000028868	DHRS3 (ENSVVUG00000028869) #13	AADACL4 (ENSVVUG00000028871) #14	AADACL3 (ENSVVUG00000028875) #15	CUNH1orf158 (ENSVVUG00000028877) #16	ENSVVUG00000028879 #18	PDPN (ENSVVUG00000028880) #19	PRDM2 (ENSVVUG00000028889) #21	ENSVVUG00000028901	ENSVVUG00000028903	ENSVVUG00000028915	ENSVVUG00000028916 ##22	KAZN (ENSVVUG00000028921) #22	TMEM51 (ENSVVUG00000028929) #23	FHAD1 (ENSVVUG00000028931) #24	EFHD2 (ENSVVUG00000028938) #25	CASP9 (ENSVVUG00000028939) #27	CTRC (ENSVVUG00000028940) #26	DNAJC16 (ENSVVUG00000028941) #28	AGMAT (ENSVVUG00000028942) #29	DDI2 (ENSVVUG00000028943) #30	RSC1A1 (ENSVVUG00000028944) #31	PLEKHM2 (ENSVVUG00000028945) #32	SLC25A34 (ENSVVUG00000028947) #33	TMEM82 (ENSVVUG00000028948) #34	FBLIM1 (ENSVVUG00000028949) #35	SPEN (ENSVVUG00000028951) #36	ZBTB17 (ENSVVUG00000028953) #37
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215.c #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT01040000241632	ENSGT00940000158724 #13	ENSGT00940000163565	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37
Dog	MODERN SPECIES	11	NPPA (ENSCAFG00845001994)	KIAA2013 (ENSCAFG00845001915)	PLOD1 (ENSCAFG00845001815)	MFN2 (ENSCAFG00845001739)	MIIP (ENSCAFG00845001629) #8	TNFRSF1B (ENSCAFG00845001488) #9	ENSCAFG00845001458	ENSCAFG00845001424	DHRS3 (ENSCAFG00845001328) #13	ENSCAFG00845001302	AADACL3 (ENSCAFG00845001278) #15	CFAP107 (ENSCAFG00845001256) #16	LRRC38 (ENSCAFG00845001236) #18	PDPN (ENSCAFG00845001081) #19	PRDM2 (ENSCAFG00845001004) #21	KAZN (ENSCAFG00845000851) #22	TMEM51 (ENSCAFG00845000766) #23	FHAD1 (ENSCAFG00845000555) #24	ENSCAFG00845000444 #26	CASP9 (ENSCAFG00845000379) #27	DNAJC16 (ENSCAFG00845000315) #28	AGMAT (ENSCAFG00845000281) #29	ENSCAFG00845000240 #31	PLEKHM2 (ENSCAFG00845004994) #32	SLC25A34 (ENSCAFG00845004977) #33	TMEM82 (ENSCAFG00845004965) #34	FBLIM1 (ENSCAFG00845004948) #35	SPEN (ENSCAFG00845004928) #36	ZBTB17 (ENSCAFG00845004912) #37	SRARP (ENSCAFG00845004899)	HSPB7 (ENSCAFG00845004889)
Dingo	MODERN SPECIES	41								DHRS3 (ENSCAFG00020004688) #13	AADACL4 (ENSCAFG00020004697) #14	AADACL3 (ENSCAFG00020004712) #15	CFAP107 (ENSCAFG00020004715) #16	LRRC38 (ENSCAFG00020004735) #18	PDPN (ENSCAFG00020004738) #19	PRDM2 (ENSCAFG00020004754) #21	ENSCAFG00020004760 ##22	KAZN (ENSCAFG00020004768) #22	ENSCAFG00020004777	TMEM51 (ENSCAFG00020004778) #23	FHAD1 (ENSCAFG00020004782) #24	ENSCAFG00020004790 #25	CTRC (ENSCAFG00020004793) #26	CASP9 (ENSCAFG00020004802) #27	ENSCAFG00020004806 #28	AGMAT (ENSCAFG00020004808) #29	DDI2 (ENSCAFG00020004832) #30	RSC1A1 (ENSCAFG00020004838) #31	PLEKHM2 (ENSCAFG00020004845) #32	SLC25A34 (ENSCAFG00020004858) #33	TMEM82 (ENSCAFG00020004877) #34	FBLIM1 (ENSCAFG00020004885) #35	ENSCAFG00020004893 #36
Felidae	ANCESTRAL SPECIES	18	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37
Panthera	ANCESTRAL SPECIES	4	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37
Tiger	DUPLICATION
Tiger	MODERN SPECIES	187	MFN2 (ENSPTIG00000020008)	ENSPTIG00000019970 #7	ENSPTIG00000019424 #8	TNFRSF1B (ENSPTIG00000018597) #9	VPS13D (ENSPTIG00000017066) #10	DHRS3 (ENSPTIG00000016902) #13	AADACL4 (ENSPTIG00000015939) #14	AADACL3 (ENSPTIG00000015446) #15	CFAP107 (ENSPTIG00000015353) #16	ENSPTIG00000014625 #17	ENSPTIG00000013585 #19	PRDM2 (ENSPTIG00000013350) #21	ENSPTIG00000013314	ENSPTIG00000013102	ENSPTIG00000012597 #22	ENSPTIG00000012333 #22	ENSPTIG00000012301 #23	ENSPTIG00000011875 #24	CTRC (ENSPTIG00000011663) #26	CASP9 (ENSPTIG00000011356) #27	DNAJC16 (ENSPTIG00000010992) #28	AGMAT (ENSPTIG00000010031) #29	DDI2 (ENSPTIG00000009951) #30	PLEKHM2 (ENSPTIG00000009093) #32	SLC25A34 (ENSPTIG00000008906) #33	ENSPTIG00000008568 #35	SRARP (ENSPTIG00000007048)	HSPB7 (ENSPTIG00000006884)	ENSPTIG00000004645	FAM131C (ENSPTIG00000002805)	EPHA2 (ENSPTIG00000000837)
Tiger	MODERN SPECIES	187	PLOD1 (ENSPTIG00000020156)	MFN2 (ENSPTIG00000020008)	ENSPTIG00000019970 #7	ENSPTIG00000019424 #8	TNFRSF1B (ENSPTIG00000018597) #9	VPS13D (ENSPTIG00000017066) #10	DHRS3 (ENSPTIG00000016902) #13	AADACL4 (ENSPTIG00000015939) #14	AADACL3 (ENSPTIG00000015446) #15	CFAP107 (ENSPTIG00000015353) #16	ENSPTIG00000014625 #17	ENSPTIG00000013585 #19	PRDM2 (ENSPTIG00000013350) #21	ENSPTIG00000013314	ENSPTIG00000013102	ENSPTIG00000012597 #22	ENSPTIG00000012333 #22	ENSPTIG00000012301 #23	ENSPTIG00000011875 #24	CTRC (ENSPTIG00000011663) #26	CASP9 (ENSPTIG00000011356) #27	DNAJC16 (ENSPTIG00000010992) #28	AGMAT (ENSPTIG00000010031) #29	DDI2 (ENSPTIG00000009951) #30	PLEKHM2 (ENSPTIG00000009093) #32	SLC25A34 (ENSPTIG00000008906) #33	ENSPTIG00000008568 #35	SRARP (ENSPTIG00000007048)	HSPB7 (ENSPTIG00000006884)	ENSPTIG00000004645	FAM131C (ENSPTIG00000002805)
Panthera_a	ANCESTRAL SPECIES	14	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37
lion	DUPLICATION
lion	MODERN SPECIES	8	MIIP (ENSPLOG00000006597) #7	ENSPLOG00000006579 #8	TNFRSF1B (ENSPLOG00000006521) #9	VPS13D (ENSPLOG00000006024) #10	DHRS3 (ENSPLOG00000005821) #13	AADACL4 (ENSPLOG00000005774) #14	AADACL3 (ENSPLOG00000005743) #15	CFAP107 (ENSPLOG00000005718) #16	ENSPLOG00000005536 #17	LRRC38 (ENSPLOG00000005430) #18	PDPN (ENSPLOG00000005381) #19	PRDM2 (ENSPLOG00000005291) #21	ENSPLOG00000005262	ENSPLOG00000005254 ##22	ENSPLOG00000005241 #22	ENSPLOG00000005226 #22	TMEM51 (ENSPLOG00000005219) #23	ENSPLOG00000005191 #24	EFHD2 (ENSPLOG00000005163) #25	CTRC (ENSPLOG00000005134) #26	CASP9 (ENSPLOG00000005099) #27	DNAJC16 (ENSPLOG00000005054) #28	AGMAT (ENSPLOG00000005024) #29	DDI2 (ENSPLOG00000004991) #30	PLEKHM2 (ENSPLOG00000004965) #32	SLC25A34 (ENSPLOG00000004954) #33	TMEM82 (ENSPLOG00000004930) #34	FBLIM1 (ENSPLOG00000004900) #35	SPEN (ENSPLOG00000004845) #36	ZBTB17 (ENSPLOG00000004804) #37	SRARP (ENSPLOG00000004770)
lion	MODERN SPECIES	8	MFN2 (ENSPLOG00000006631)	MIIP (ENSPLOG00000006597) #7	ENSPLOG00000006579 #8	TNFRSF1B (ENSPLOG00000006521) #9	VPS13D (ENSPLOG00000006024) #10	DHRS3 (ENSPLOG00000005821) #13	AADACL4 (ENSPLOG00000005774) #14	AADACL3 (ENSPLOG00000005743) #15	CFAP107 (ENSPLOG00000005718) #16	ENSPLOG00000005536 #17	LRRC38 (ENSPLOG00000005430) #18	PDPN (ENSPLOG00000005381) #19	PRDM2 (ENSPLOG00000005291) #21	ENSPLOG00000005262	ENSPLOG00000005254 ##22	ENSPLOG00000005241 #22	ENSPLOG00000005226 #22	TMEM51 (ENSPLOG00000005219) #23	ENSPLOG00000005191 #24	EFHD2 (ENSPLOG00000005163) #25	CTRC (ENSPLOG00000005134) #26	CASP9 (ENSPLOG00000005099) #27	DNAJC16 (ENSPLOG00000005054) #28	AGMAT (ENSPLOG00000005024) #29	DDI2 (ENSPLOG00000004991) #30	PLEKHM2 (ENSPLOG00000004965) #32	SLC25A34 (ENSPLOG00000004954) #33	TMEM82 (ENSPLOG00000004930) #34	FBLIM1 (ENSPLOG00000004900) #35	SPEN (ENSPLOG00000004845) #36	ZBTB17 (ENSPLOG00000004804) #37
leopard	MODERN SPECIES	37	MFN2 (ENSPPRG00000007167)	MIIP (ENSPPRG00000006601) #7	TNFRSF8 (ENSPPRG00000006333) #8	TNFRSF1B (ENSPPRG00000004270) #9	VPS13D (ENSPPRG00000003625) #10	DHRS3 (ENSPPRG00000003032) #13	AADACL4 (ENSPPRG00000002552) #14	AADACL3 (ENSPPRG00000002379) #15	CFAP107 (ENSPPRG00000002122) #16	ENSPPRG00000001268 #17	LRRC38 (ENSPPRG00000000810) #18	PDPN (ENSPPRG00000000655) #19	PRDM2 (ENSPPRG00000022577) #21	ENSPPRG00000020081	ENSPPRG00000014940	ENSPPRG00000014628 #22	ENSPPRG00000012106	TMEM51 (ENSPPRG00000011953) #23	ENSPPRG00000011408 #24	EFHD2 (ENSPPRG00000010382) #25	CTRC (ENSPPRG00000009465) #26	CASP9 (ENSPPRG00000009345) #27	DNAJC16 (ENSPPRG00000008217) #28	AGMAT (ENSPPRG00000007223) #29	DDI2 (ENSPPRG00000007095) #30	RSC1A1 (ENSPPRG00000014925) #31	PLEKHM2 (ENSPPRG00000006492) #32	SLC25A34 (ENSPPRG00000004027) #33	TMEM82 (ENSPPRG00000003864) #34	FBLIM1 (ENSPPRG00000003677) #35	ZBTB17 (ENSPPRG00000002547) #37
Cat	MODERN SPECIES	239	NPPB (ENSFCAG00000000072)	KIAA2013 (ENSFCAG00000030474)	PLOD1 (ENSFCAG00000000074)	MFN2 (ENSFCAG00000000076)	MIIP (ENSFCAG00000000077) #7	TNFRSF8 (ENSFCAG00000001453) #8	TNFRSF1B (ENSFCAG00000003778) #9	VPS13D (ENSFCAG00000003779) #10	DHRS3 (ENSFCAG00000000576) #13	AADACL3 (ENSFCAG00000031519) #15	CFAP107 (ENSFCAG00000027769) #16	ENSFCAG00000023782 #17	LRRC38 (ENSFCAG00000000580) #18	PDPN (ENSFCAG00000007570) #19	PRDM2 (ENSFCAG00000032471) #21	KAZN (ENSFCAG00000038995) #22	TMEM51 (ENSFCAG00000043261) #23	ENSFCAG00000003267 #24	EFHD2 (ENSFCAG00000041741) #25	CTRC (ENSFCAG00000003268) #26	CASP9 (ENSFCAG00000026776) #27	DNAJC16 (ENSFCAG00000011582) #28	AGMAT (ENSFCAG00000011584) #29	ENSFCAG00000011585 #31	PLEKHM2 (ENSFCAG00000011586) #32	SLC25A34 (ENSFCAG00000011588) #33	TMEM82 (ENSFCAG00000011589) #34	FBLIM1 (ENSFCAG00000011590) #35	SPEN (ENSFCAG00000010165) #36	ZBTB17 (ENSFCAG00000023421) #37	SRARP (ENSFCAG00000044158)
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000154513.A	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b.l #36
Equus	ANCESTRAL SPECIES	2	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b.j #10	ENSGT01040000241632	ENSGT00940000158724 #13	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b.k #36	ENSGT00940000157087.a.b.l #36
Horse	MODERN SPECIES	11	PLOD1 (ENSECAG00000022842)	MFN2 (ENSECAG00000016296)	MIIP (ENSECAG00000014794) #7	TNFRSF8 (ENSECAG00000014108) #8	TNFRSF1B (ENSECAG00000012481) #9	VPS13D (ENSECAG00000016150) #10	ENSECAG00000045103 #10	DHRS3 (ENSECAG00000013582) #13	AADACL3 (ENSECAG00000013280) #15	CFAP107 (ENSECAG00000033407) #16	ENSECAG00000010285 #17	LRRC38 (ENSECAG00000010195) #18	ENSECAG00000032595 #19	ENSECAG00000050440 #21	PRDM2 (ENSECAG00000008911)	KAZN (ENSECAG00000006829) #22	FHAD1 (ENSECAG00000025126) #24	CTRC (ENSECAG00000025069) #26	ENSECAG00000020902	CASP9 (ENSECAG00000017291) #27	DNAJC16 (ENSECAG00000010422) #28	AGMAT (ENSECAG00000008308) #29	ENSECAG00000041115 #31	PLEKHM2 (ENSECAG00000014652) #32	SLC25A34 (ENSECAG00000013382) #33	TMEM82 (ENSECAG00000013016) #34	FBLIM1 (ENSECAG00000011874) #35	ENSECAG00000050306 #36	SPEN (ENSECAG00000008833) #36	ZBTB17 (ENSECAG00000024826) #37	SRARP (ENSECAG00000024814)
Donkey	MODERN SPECIES	25	TNFRSF8 (ENSEASG00005016474) #8	TNFRSF1B (ENSEASG00005033534) #9	VPS13D (ENSEASG00005016180) #10	ENSEASG00005031338	DHRS3 (ENSEASG00005016047) #13	AADACL3 (ENSEASG00005027488) #15	ENSEASG00005008351	CFAP107 (ENSEASG00005016042) #16	ENSEASG00005015988 #17	ENSEASG00005015978 #18	ENSEASG00005015975 #19	ENSEASG00005028661	PRDM2 (ENSEASG00005015970) #21	ENSEASG00005027620	ENSEASG00005037107	ENSEASG00005032223 #22	TMEM51 (ENSEASG00005015962) #23	FHAD1 (ENSEASG00005015958) #24	EFHD2 (ENSEASG00005015953) #25	CTRC (ENSEASG00005015948) #26	ENSEASG00005015940	CASP9 (ENSEASG00005015937) #27	DNAJC16 (ENSEASG00005015931) #28	AGMAT (ENSEASG00005015929) #29	ENSEASG00005015927 #31	PLEKHM2 (ENSEASG00005015922) #32	SLC25A34 (ENSEASG00005031113) #33	TMEM82 (ENSEASG00005015917) #34	FBLIM1 (ENSEASG00005015915) #35	ENSEASG00005028986 #36	ENSEASG00005032545 #36
Chiroptera	ANCESTRAL SPECIES		ENSGT00940000154513.A	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b.l #36
Megabat	MODERN SPECIES	2995																KAZN (ENSPVAG00000006039) #22	ENSPVAG00000006042	TMEM51 (ENSPVAG00000006044) #23	ENSPVAG00000006045 #24
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00940000154513.A	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b.l #36
Greater horseshoe bat	MODERN SPECIES	27	PLOD1 (ENSRFEG00010017314)	MFN2 (ENSRFEG00010017368)	MIIP (ENSRFEG00010007938) #7	TNFRSF8 (ENSRFEG00010008019) #8	TNFRSF1B (ENSRFEG00010008246) #9	VPS13D (ENSRFEG00010008330) #10	DHRS3 (ENSRFEG00010008475) #13	ENSRFEG00010008557 #16	ENSRFEG00010008603 #15	ENSRFEG00010008691 #15	ENSRFEG00010008754 #16	ENSRFEG00010008828 #17	LRRC38 (ENSRFEG00010008885) #18	PDPN (ENSRFEG00010008924) #19	PRDM2 (ENSRFEG00010009040) #21	KAZN (ENSRFEG00010009239) #22	TMEM51 (ENSRFEG00010009731) #23	FHAD1 (ENSRFEG00010009808) #24	EFHD2 (ENSRFEG00010010221) #25	CTRC (ENSRFEG00010010289) #26	ENSRFEG00010010440	CASP9 (ENSRFEG00010010566) #27	DNAJC16 (ENSRFEG00010010616) #28	AGMAT (ENSRFEG00010010690) #29	ENSRFEG00010010770 #31	PLEKHM2 (ENSRFEG00010010902) #32	SLC25A34 (ENSRFEG00010011058) #33	TMEM82 (ENSRFEG00010011094) #34	FBLIM1 (ENSRFEG00010011168) #35	SPEN (ENSRFEG00010011277) #36	ZBTB17 (ENSRFEG00010011332) #37
Microbat	DUPLICATION
Microbat	MODERN SPECIES	2767																ENSMLUG00000009858 #22
Microbat	MODERN SPECIES	1593																ENSMLUG00000009830 #22	TMEM51 (ENSMLUG00000009586) #23
Artiodactyla	ANCESTRAL SPECIES		ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.i.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.i.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.i.a.b.d #17	ENSGT01030000234531.A.b.b.b.i.b #17	ENSGT01030000234531.A.b.b.b.i.a.b.c #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Pecora	ANCESTRAL SPECIES	22					ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b #17	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.j #17	ENSGT01030000234531.A.b.b.b.i.a.b.d #17	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Percora_a	ANCESTRAL SPECIES	15	ENSGT00550000074794.k.b	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.j #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.i.a.b.d #17	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Bovidae	ANCESTRAL SPECIES	15	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.b.c.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.b.d #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Bovinae	ANCESTRAL SPECIES	12	ENSGT01030000234531.A.b.b.b.i.a.b.c.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.b.d #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Bos	ANCESTRAL SPECIES	12	ENSGT01030000234531.A.b.b.b.i.a.b.c.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.b.d.d #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003.d #35	ENSGT00940000154141.B.t.b	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.b
Bos_a	ANCESTRAL SPECIES	8	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.b.c.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.b.d.d #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003.d #35	ENSGT00940000154141.B.t.b	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.b
Wild yak	MODERN SPECIES	185														ENSBMUG00000025697 #21	ENSBMUG00000025687	KAZN (ENSBMUG00000025682) #22	TMEM51 (ENSBMUG00000025671) #23	FHAD1 (ENSBMUG00000025658) #24	EFHD2 (ENSBMUG00000025629) #25	CTRC (ENSBMUG00000025619) #26	ENSBMUG00000025605	CASP9 (ENSBMUG00000025595) #27	DNAJC16 (ENSBMUG00000025587) #28	AGMAT (ENSBMUG00000025575) #29	ENSBMUG00000025563 #31	PLEKHM2 (ENSBMUG00000025554) #32	SLC25A34 (ENSBMUG00000025524) #33	TMEM82 (ENSBMUG00000025518) #34	FBLIM1 (ENSBMUG00000025515) #35	SPEN (ENSBMUG00000025507) #36	ZBTB17 (ENSBMUG00000025489) #37
Domestic yak	MODERN SPECIES	5	ENSBGRG00000021633	ENSBGRG00000021586 #17	ENSBGRG00000021556 #17	ENSBGRG00000021508 #17	ENSBGRG00000021485 #17	ENSBGRG00000021466 #17	ENSBGRG00000021449 #17	ENSBGRG00000021430 #17	ENSBGRG00000021379 #17	ENSBGRG00000021323 #17	ENSBGRG00000021291 #17	LRRC38 (ENSBGRG00000021255) #18	ENSBGRG00000021152 #19	PRDM2 (ENSBGRG00000020945) #21	ENSBGRG00000020912	KAZN (ENSBGRG00000020603) #22	TMEM51 (ENSBGRG00000020549) #23	FHAD1 (ENSBGRG00000020058) #24	EFHD2 (ENSBGRG00000020005) #25	CTRC (ENSBGRG00000019947) #26	ENSBGRG00000019856	CASP9 (ENSBGRG00000019581) #27	DNAJC16 (ENSBGRG00000019367) #28	AGMAT (ENSBGRG00000019283) #29	ENSBGRG00000019177 #31	PLEKHM2 (ENSBGRG00000019013) #32	SLC25A34 (ENSBGRG00000018908) #33	TMEM82 (ENSBGRG00000018870) #34	ENSBGRG00000018722 #35	ENSBGRG00000018679	ENSBGRG00000018650
Bos_b	ANCESTRAL SPECIES	27	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.b.c.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.b.d.d #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003.d #35	ENSGT00940000154141.B.t.b	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.b	ENSGT00940000157087.a.b #36
Cow	DUPLICATION
Cow	MODERN SPECIES	7	ENSBTAG00000050338 #17	ENSBTAG00000051639 #17	ENSBTAG00000054788 #17	ENSBTAG00000031507 #17	ENSBTAG00000053200 #17	ENSBTAG00000054475 #17	ENSBTAG00000046630 #17	ENSBTAG00000051014 #17	ENSBTAG00000054147 #17	ENSBTAG00000050422 #17	ENSBTAG00000024791 #17	LRRC38 (ENSBTAG00000017883) #18	PDPN (ENSBTAG00000001788) #19	PRDM2 (ENSBTAG00000020552) #21	ENSBTAG00000050764 ##22	ENSBTAG00000054228 #22	KAZN (ENSBTAG00000015606) #22	TMEM51 (ENSBTAG00000005300) #23	FHAD1 (ENSBTAG00000002408) #24	EFHD2 (ENSBTAG00000009048) #25	CTRC (ENSBTAG00000024497)	CELA2A (ENSBTAG00000024496)	CASP9 (ENSBTAG00000002472) #27	DNAJC16 (ENSBTAG00000002476) #28	AGMAT (ENSBTAG00000002478) #29	ENSBTAG00000039662 #31	PLEKHM2 (ENSBTAG00000018722) #32	SLC25A34 (ENSBTAG00000018723) #33	TMEM82 (ENSBTAG00000018724) #34	FBLIM1 (ENSBTAG00000018725) #35	SPEN (ENSBTAG00000018729) #36
Cow	MODERN SPECIES	7	ENSBTAG00000051639 #17	ENSBTAG00000054788 #17	ENSBTAG00000031507 #17	ENSBTAG00000053200 #17	ENSBTAG00000054475 #17	ENSBTAG00000046630 #17	ENSBTAG00000051014 #17	ENSBTAG00000054147 #17	ENSBTAG00000050422 #17	ENSBTAG00000024791 #17	LRRC38 (ENSBTAG00000017883) #18	PDPN (ENSBTAG00000001788) #19	PRDM2 (ENSBTAG00000020552) #21	ENSBTAG00000050764 ##22	ENSBTAG00000054228 #22	KAZN (ENSBTAG00000015606) #22	TMEM51 (ENSBTAG00000005300) #23	FHAD1 (ENSBTAG00000002408) #24	EFHD2 (ENSBTAG00000009048) #25	CTRC (ENSBTAG00000024497)	CELA2A (ENSBTAG00000024496)	CASP9 (ENSBTAG00000002472) #27	DNAJC16 (ENSBTAG00000002476) #28	AGMAT (ENSBTAG00000002478) #29	ENSBTAG00000039662 #31	PLEKHM2 (ENSBTAG00000018722) #32	SLC25A34 (ENSBTAG00000018723) #33	TMEM82 (ENSBTAG00000018724) #34	FBLIM1 (ENSBTAG00000018725) #35	SPEN (ENSBTAG00000018729) #36	ZBTB17 (ENSBTAG00000018730) #37
Hybrid Bos Indicus	MODERN SPECIES	7	ENSBIXG00005008982 #17	ENSBIXG00005009342 #17	ENSBIXG00005007254 #17	ENSBIXG00005009912 #17	ENSBIXG00005006987 #17	ENSBIXG00005010103 #17	ENSBIXG00005000864 #17	ENSBIXG00005000883 #17	ENSBIXG00005010457 #17	ENSBIXG00005010530 #17	ENSBIXG00005006420 #17	LRRC38 (ENSBIXG00005000595) #18	ENSBIXG00005000979 #19	PRDM2 (ENSBIXG00005007097) #21	ENSBIXG00005005375	KAZN (ENSBIXG00005011261) #22	TMEM51 (ENSBIXG00005011327) #23	FHAD1 (ENSBIXG00005011647) #24	EFHD2 (ENSBIXG00005011720) #25	ENSBIXG00005011756	ENSBIXG00005005955	CASP9 (ENSBIXG00005005479) #27	DNAJC16 (ENSBIXG00005001178) #28	AGMAT (ENSBIXG00005000434) #29	ENSBIXG00005011928 #31	PLEKHM2 (ENSBIXG00005012000) #32	SLC25A34 (ENSBIXG00005012016) #33	TMEM82 (ENSBIXG00005012046) #34	FBLIM1 (ENSBIXG00005012085) #35	ENSBIXG00005012103	ENSBIXG00005012123
American bison	MODERN SPECIES	3204	ENSBBBG00000001187 #17	ENSBBBG00000000878 #17	ENSBBBG00000003594 #17	ENSBBBG00000006952 #17	ENSBBBG00000003702 #17	ENSBBBG00000003719 #17	ENSBBBG00000015055 #17	ENSBBBG00000015074 #17	ENSBBBG00000015138 #17	ENSBBBG00000015151 #17	ENSBBBG00000003551 #17	ENSBBBG00000015198 #17	LRRC38 (ENSBBBG00000015206) #18	ENSBBBG00000015215 #19	PRDM2 (ENSBBBG00000015229) #21	KAZN (ENSBBBG00000015286) #22	TMEM51 (ENSBBBG00000015300) #23	FHAD1 (ENSBBBG00000001305) #24	EFHD2 (ENSBBBG00000001289) #25	ENSBBBG00000001259	ENSBBBG00000003506	CASP9 (ENSBBBG00000003489) #27	DNAJC16 (ENSBBBG00000015369) #28	AGMAT (ENSBBBG00000015382) #29	DDI2 (ENSBBBG00000003839) #30	RSC1A1 (ENSBBBG00000015392) #31	PLEKHM2 (ENSBBBG00000003857) #32	SLC25A34 (ENSBBBG00000015510) #33	TMEM82 (ENSBBBG00000007137) #34	FBLIM1 (ENSBBBG00000015556) #35	ENSBBBG00000015562
Caprinae	ANCESTRAL SPECIES	12	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.b.d #17	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.b.c.b.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a.h #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Rambouillet Sheep	MODERN SPECIES	3	ENSOARG00020010409 #17	ENSOARG00020010369 #17	ENSOARG00020010311 #17	ENSOARG00020010268 #17	ENSOARG00020009699 #17	ENSOARG00020009442 #17	ENSOARG00020009412 #17	ENSOARG00020009341 #17	ENSOARG00020009285 #17	ENSOARG00020009198 #17	ENSOARG00020020120 #17	LRRC38 (ENSOARG00020020097) #18	PDPN (ENSOARG00020020058) #19	PRDM2 (ENSOARG00020019392) #21	ENSOARG00020019315	KAZN (ENSOARG00020018607) #22	TMEM51 (ENSOARG00020018527) #23	FHAD1 (ENSOARG00020018014) #24	EFHD2 (ENSOARG00020017962) #25	CTRC (ENSOARG00020017905) #26	ENSOARG00020017822	CASP9 (ENSOARG00020017778) #27	DNAJC16 (ENSOARG00020017433) #28	AGMAT (ENSOARG00020017341) #29	PLEKHM2 (ENSOARG00020016680) #32	SLC25A34 (ENSOARG00020016601) #33	TMEM82 (ENSOARG00020016514) #34	FBLIM1 (ENSOARG00020016382) #35	SPEN (ENSOARG00020016226) #36	ZBTB17 (ENSOARG00020015851) #37	SAMD11 (ENSOARG00020015279)
Goat	MODERN SPECIES	7	ENSCHIG00000016311	AADACL3 (ENSCHIG00000019769) #15	CFAP107 (ENSCHIG00000011019) #16	ENSCHIG00000020333 #17	ENSCHIG00000014888 #17	ENSCHIG00000008224 #17	ENSCHIG00000020507 #17	ENSCHIG00000014501 #17	ENSCHIG00000004814 #17	ENSCHIG00000014605 #17	LRRC38 (ENSCHIG00000025277) #18	PDPN (ENSCHIG00000018527) #19	PRDM2 (ENSCHIG00000023399) #21	ENSCHIG00000010486 ##22	ENSCHIG00000006445	KAZN (ENSCHIG00000017691) #22	TMEM51 (ENSCHIG00000026268) #23	FHAD1 (ENSCHIG00000025559) #24	EFHD2 (ENSCHIG00000014798) #25	ENSCHIG00000024451	ENSCHIG00000024541	CASP9 (ENSCHIG00000011738) #27	DNAJC16 (ENSCHIG00000015911) #28	AGMAT (ENSCHIG00000026472) #29	DDI2 (ENSCHIG00000018822) #30	RSC1A1 (ENSCHIG00000007845) #31	PLEKHM2 (ENSCHIG00000024452) #32	SLC25A34 (ENSCHIG00000019912) #33	TMEM82 (ENSCHIG00000003584) #34	FBLIM1 (ENSCHIG00000017802) #35	ENSCHIG00000026022
Siberian musk deer	MODERN SPECIES	389	ENSMMSG00000022549 #17	ENSMMSG00000022796 #17	ENSMMSG00000022826 #17	ENSMMSG00000004665 #17	ENSMMSG00000005072 #17	ENSMMSG00000005284 #17	ENSMMSG00000005419 #17	ENSMMSG00000005559 #17	ENSMMSG00000005659 #17	ENSMMSG00000005756 #17	ENSMMSG00000005826 #17	ENSMMSG00000006132 #17	LRRC38 (ENSMMSG00000006158) #18	PDPN (ENSMMSG00000006182) #19	PRDM2 (ENSMMSG00000006211) #21	KAZN (ENSMMSG00000006323) #22	TMEM51 (ENSMMSG00000006826) #23	FHAD1 (ENSMMSG00000006911) #24	EFHD2 (ENSMMSG00000007253) #25	ENSMMSG00000007296	ENSMMSG00000007363	CASP9 (ENSMMSG00000007413) #27	DNAJC16 (ENSMMSG00000007464) #28	AGMAT (ENSMMSG00000007536) #29	ENSMMSG00000007570 #30	RSC1A1 (ENSMMSG00000007605) #31	PLEKHM2 (ENSMMSG00000007626) #32	SLC25A34 (ENSMMSG00000007677) #33	TMEM82 (ENSMMSG00000007707) #34	FBLIM1 (ENSMMSG00000007749) #35	SPEN (ENSMMSG00000007827) #36
Yarkand deer	MODERN SPECIES	5	ENSCHYG00000025611 #17	ENSCHYG00000025592	ENSCHYG00000025542 #17	ENSCHYG00000025520 #17	ENSCHYG00000025494 #17	ENSCHYG00000025470 #17	ENSCHYG00000025459	ENSCHYG00000025443	ENSCHYG00000025290 #17	ENSCHYG00000025053 #17	ENSCHYG00000024944 #17	ENSCHYG00000024866 #17	LRRC38 (ENSCHYG00000024848) #18	PDPN (ENSCHYG00000024833) #19	PRDM2 (ENSCHYG00000024667) #21	KAZN (ENSCHYG00000024327) #22	TMEM51 (ENSCHYG00000024288) #23	FHAD1 (ENSCHYG00000024072) #24	ENSCHYG00000023937	ENSCHYG00000023761	CASP9 (ENSCHYG00000023723) #27	DNAJC16 (ENSCHYG00000023597) #28	AGMAT (ENSCHYG00000023518) #29	ENSCHYG00000023341 #31	PLEKHM2 (ENSCHYG00000023065) #32	ENSCHYG00000022975 #33	TMEM82 (ENSCHYG00000022909) #34	FBLIM1 (ENSCHYG00000022827) #35	SPEN (ENSCHYG00000022636) #36	ZBTB17 (ENSCHYG00000022216) #37	SAMD11 (ENSCHYG00000021909)
Cetacea	ANCESTRAL SPECIES		ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.i.a.b.d #17	ENSGT01030000234531.A.b.b.b.i.a.b.c #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Blue whale	MODERN SPECIES		TNFRSF1B (ENSBMSG00010007324) #9	VPS13D (ENSBMSG00010007384) #10	DHRS3 (ENSBMSG00010007478) #13	AADACL4 (ENSBMSG00010007488) #14	CFAP107 (ENSBMSG00010007511) #16	ENSBMSG00010007532 #17	ENSBMSG00010007544 #17	ENSBMSG00010007602 #17	ENSBMSG00010007792 #17	ENSBMSG00010007917 #17	ENSBMSG00010007941 #17	ENSBMSG00010007958 #17	LRRC38 (ENSBMSG00010007987) #18	PDPN (ENSBMSG00010007995) #19	PRDM2 (ENSBMSG00010008032) #21	KAZN (ENSBMSG00010008100) #22	ENSBMSG00010008186	ENSBMSG00010008193	TMEM51 (ENSBMSG00010008196) #23	FHAD1 (ENSBMSG00010008207) #24	ENSBMSG00010008241	EFHD2 (ENSBMSG00010008253) #25	CTRC (ENSBMSG00010008262) #26	ENSBMSG00010008297	CASP9 (ENSBMSG00010008360) #27	DNAJC16 (ENSBMSG00010008382) #28	AGMAT (ENSBMSG00010008410) #29	ENSBMSG00010008433 #31	PLEKHM2 (ENSBMSG00010008480) #32	SLC25A34 (ENSBMSG00010008526) #33	TMEM82 (ENSBMSG00010008539) #34
Odontoceti	ANCESTRAL SPECIES		ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.i.a.b.d #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Sperm whale	MODERN SPECIES	214																ENSPCTG00005014737 #22
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.i.a.b.d #17	ENSGT01030000234531.A.b.b.b.i.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.i.a.b.d #17	ENSGT01030000234531.A.b.b.b.i.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Monodontidae	ANCESTRAL SPECIES		ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.i.a.b.d #17	ENSGT01030000234531.A.b.b.b.i.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Narwhal	MODERN SPECIES	304	TNFRSF1B (ENSMMNG00015006400) #9	VPS13D (ENSMMNG00015006173) #10	DHRS3 (ENSMMNG00015006042) #13	AADACL3 (ENSMMNG00015006022) #15	CFAP107 (ENSMMNG00015006001) #16	ENSMMNG00015005979 #17	ENSMMNG00015005966 #17	ENSMMNG00015005942 #17	ENSMMNG00015005928 #17	ENSMMNG00015005863 #17	LRRC38 (ENSMMNG00015005800) #18	PDPN (ENSMMNG00015005780) #19	ENSMMNG00015005757	PRDM2 (ENSMMNG00015005720) #21	ENSMMNG00015005668	KAZN (ENSMMNG00015005583) #22	TMEM51 (ENSMMNG00015005532) #23	FHAD1 (ENSMMNG00015005493) #24	EFHD2 (ENSMMNG00015005471) #25	CTRC (ENSMMNG00015005454) #26	ENSMMNG00015005395	CASP9 (ENSMMNG00015005353) #27	DNAJC16 (ENSMMNG00015005297) #28	AGMAT (ENSMMNG00015005248) #29	DDI2 (ENSMMNG00015009565) #30	RSC1A1 (ENSMMNG00015009553) #31	PLEKHM2 (ENSMMNG00015009498) #32	SLC25A34 (ENSMMNG00015009466) #33	TMEM82 (ENSMMNG00015009449) #34	FBLIM1 (ENSMMNG00015009423) #35	SPEN (ENSMMNG00015009352) #36
Beluga whale	MODERN SPECIES	51	KIAA2013 (ENSDLEG00000017314)	PLOD1 (ENSDLEG00000017268)	MFN2 (ENSDLEG00000017211)	MIIP (ENSDLEG00000017173) #7	TNFRSF1B (ENSDLEG00000017139) #9	VPS13D (ENSDLEG00000015351) #10	DHRS3 (ENSDLEG00000015176) #13	CUNH1orf158 (ENSDLEG00000015158) #16	ENSDLEG00000015097 #17	ENSDLEG00000014811 #17	ENSDLEG00000014598 #17	LRRC38 (ENSDLEG00000014556) #18	PDPN (ENSDLEG00000014539) #19	PRDM2 (ENSDLEG00000014477) #21	ENSDLEG00000014459 ##22	KAZN (ENSDLEG00000014420) #22	TMEM51 (ENSDLEG00000014403) #23	FHAD1 (ENSDLEG00000014350) #24	EFHD2 (ENSDLEG00000014322) #25	CTRC (ENSDLEG00000014286) #26	ENSDLEG00000014265	CASP9 (ENSDLEG00000014226) #27	DNAJC16 (ENSDLEG00000014190) #28	AGMAT (ENSDLEG00000014173) #29	ENSDLEG00000014150 #31	PLEKHM2 (ENSDLEG00000014078) #32	SLC25A34 (ENSDLEG00000014059) #33	TMEM82 (ENSDLEG00000014032) #34	FBLIM1 (ENSDLEG00000013991) #35	SPEN (ENSDLEG00000013956) #36	ZBTB17 (ENSDLEG00000013910) #37
Vaquita	MODERN SPECIES		MIIP (ENSPSNG00000012075) #7	TNFRSF8 (ENSPSNG00000012138) #8	TNFRSF1B (ENSPSNG00000012455) #9	VPS13D (ENSPSNG00000012531) #10	DHRS3 (ENSPSNG00000012639) #13	CFAP107 (ENSPSNG00000012671) #16	ENSPSNG00000012759 #17	ENSPSNG00000012912 #17	ENSPSNG00000013025 #17	ENSPSNG00000013486 #17	ENSPSNG00000013599 #17	LRRC38 (ENSPSNG00000014112) #18	PDPN (ENSPSNG00000014169) #19	ENSPSNG00000014314 #21	ENSPSNG00000014427	KAZN (ENSPSNG00000014520) #22	ENSPSNG00000015276	TMEM51 (ENSPSNG00000015327) #23	FHAD1 (ENSPSNG00000015379) #24	ENSPSNG00000015562	EFHD2 (ENSPSNG00000015611) #25	CTRC (ENSPSNG00000015637) #26	ENSPSNG00000015787	CASP9 (ENSPSNG00000016214) #27	DNAJC16 (ENSPSNG00000016286) #28	AGMAT (ENSPSNG00000016383) #29	DDI2 (ENSPSNG00000016493) #30	RSC1A1 (ENSPSNG00000016538) #31	PLEKHM2 (ENSPSNG00000000003) #32	SLC25A34 (ENSPSNG00000000006) #33	TMEM82 (ENSPSNG00000000008) #34
Dolphin	MODERN SPECIES	2513																KAZN (ENSTTRG00000017165) #22	ENSTTRG00000017168
Camelidae	ANCESTRAL SPECIES	3	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.i.b.b #17	ENSGT01030000234531.A.b.b.b.i.b.a #17	ENSGT00940000163979	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Arabian camel	DUPLICATION
Arabian camel	MODERN SPECIES	4	PLOD1 (ENSCDRG00005017719)	MFN2 (ENSCDRG00005017822)	MIIP (ENSCDRG00005017918) #7	TNFRSF8 (ENSCDRG00005017963) #8	TNFRSF1B (ENSCDRG00005018060) #9	VPS13D (ENSCDRG00005018211) #10	DHRS3 (ENSCDRG00005018610) #13	AADACL3 (ENSCDRG00005018643) #15	CFAP107 (ENSCDRG00005018678) #16	ENSCDRG00005018739 #17	ENSCDRG00005018920 #17	ENSCDRG00005019181	PDPN (ENSCDRG00005019191) #19	PRDM2 (ENSCDRG00005019238) #21	ENSCDRG00005019343	ENSCDRG00005019377 #22	TMEM51 (ENSCDRG00005019540) #23	FHAD1 (ENSCDRG00005019578) #24	EFHD2 (ENSCDRG00005019753) #25	CTRC (ENSCDRG00005019769) #26	ENSCDRG00005019791	CASP9 (ENSCDRG00005019814) #27	DNAJC16 (ENSCDRG00005019829) #28	AGMAT (ENSCDRG00005019855) #29	ENSCDRG00005019881 #31	PLEKHM2 (ENSCDRG00005019947) #32	SLC25A34 (ENSCDRG00005020338) #33	TMEM82 (ENSCDRG00005020345) #34	FBLIM1 (ENSCDRG00005003370) #35	SPEN (ENSCDRG00005003423) #36	ZBTB17 (ENSCDRG00005003563) #37
Arabian camel	MODERN SPECIES	21	NSMAF (ENSCDRG00005020419)	TOX (ENSCDRG00005020469)	CA8 (ENSCDRG00005020483)	RAB2A (ENSCDRG00005020500)	CHD7 (ENSCDRG00005020522)	CLVS1 (ENSCDRG00005020550)	ASPH (ENSCDRG00005020568)	NKAIN3 (ENSCDRG00005020651)	GGH (ENSCDRG00005020657)	TTPA (ENSCDRG00005020665)	ENSCDRG00005020671	YTHDF3 (ENSCDRG00005020678)	ENSCDRG00005020699	ENSCDRG00005020705	CYP7B1 (ENSCDRG00005020713)	ENSCDRG00005020716 #22	ARMC1 (ENSCDRG00005020720)	MTFR1 (ENSCDRG00005020730)	PDE7A (ENSCDRG00005020748)	DNAJC5B (ENSCDRG00005020764)	TRIM55 (ENSCDRG00005020793)	CRH (ENSCDRG00005020833)	RRS1 (ENSCDRG00005020834)	ADHFE1 (ENSCDRG00005020841)	VXN (ENSCDRG00005020864)	MYBL1 (ENSCDRG00005020892)	VCPIP1 (ENSCDRG00005020916)	SGK3 (ENSCDRG00005020926)	MCMDC2 (ENSCDRG00005020934)	TCF24 (ENSCDRG00005020969)	PPP1R42 (ENSCDRG00005020972)
Suina	ANCESTRAL SPECIES	10	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.i.a.b.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.c.b #17	ENSGT01030000234531.A.b.b.b.i.a.b.a #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.c.a.b #17	ENSGT01030000234531.A.b.b.b.i.a.a.b.c.a.a #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Chacoan peccary	MODERN SPECIES	808	AADACL4 (ENSCWAG00000007106) #14	AADACL3 (ENSCWAG00000007133) #15	CFAP107 (ENSCWAG00000007157) #16	ENSCWAG00000007230 #17	ENSCWAG00000007389 #17	ENSCWAG00000007596 #17	ENSCWAG00000007632 #17	ENSCWAG00000007895 #17	ENSCWAG00000007976 #17	ENSCWAG00000008260 #17	ENSCWAG00000009563 #17	LRRC38 (ENSCWAG00000009598) #18	PDPN (ENSCWAG00000009625) #19	PRDM2 (ENSCWAG00000009695) #21	ENSCWAG00000010143	KAZN (ENSCWAG00000010184) #22	TMEM51 (ENSCWAG00000010594) #23	FHAD1 (ENSCWAG00000010624) #24	EFHD2 (ENSCWAG00000010688) #25	CTRC (ENSCWAG00000010723) #26	ENSCWAG00000010788	CASP9 (ENSCWAG00000010871) #27	DNAJC16 (ENSCWAG00000010911) #28	AGMAT (ENSCWAG00000011107) #29	DDI2 (ENSCWAG00000011183) #30	RSC1A1 (ENSCWAG00000011233) #31	PLEKHM2 (ENSCWAG00000011249) #32	SLC25A34 (ENSCWAG00000011336) #33	TMEM82 (ENSCWAG00000011399) #34	FBLIM1 (ENSCWAG00000011464) #35	SPEN (ENSCWAG00000011530) #36
Pig	MODERN SPECIES	14	ENSSSCG00000033129 #17	ENSSSCG00000059568 #17	ENSSSCG00000055083 #17	ENSSSCG00000031836 #17	ENSSSCG00000044717 #17	ENSSSCG00000063473 #17	ENSSSCG00000059389 #17	ENSSSCG00000040680 #17	ENSSSCG00000037632 #17	LRRC38 (ENSSSCG00000003449) #18	ENSSSCG00000003448	PDPN (ENSSSCG00000003451) #19	PRDM2 (ENSSSCG00000020710) #21	ENSSSCG00000054874	ENSSSCG00000043303	KAZN (ENSSSCG00000037676) #22	TMEM51 (ENSSSCG00000021026) #23	FHAD1 (ENSSSCG00000003455) #24	EFHD2 (ENSSSCG00000003458) #25	CTRC (ENSSSCG00000054068) #26	CELA2A (ENSSSCG00000003459)	CASP9 (ENSSSCG00000003460) #27	DNAJC16 (ENSSSCG00000003464) #28	AGMAT (ENSSSCG00000003463) #29	RSC1A1 (ENSSSCG00000003461) #31	PLEKHM2 (ENSSSCG00000003468) #32	SLC25A34 (ENSSSCG00000032950) #33	TMEM82 (ENSSSCG00000003466) #34	FBLIM1 (ENSSSCG00000003465) #35	ZBTB17 (ENSSSCG00000026103) #37	ENSSSCG00000059667
Eulipotyphla	ANCESTRAL SPECIES	2573																ENSGT00940000154570.b #22	ENSGT00400000022892
Hedgehog	MODERN SPECIES	8037																ENSEEUG00000015196 #22
Common shrew	MODERN SPECIES	6313																ENSSARG00000009702 #22	ENSSARG00000009715
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Primates	ANCESTRAL SPECIES	4	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b #17	ENSGT01030000234531.A.b.b.b.a #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00390000002770	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b #17	ENSGT01030000234531.A.b.b.b.a #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Lemuriformes	ANCESTRAL SPECIES		ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b.b #17	ENSGT01030000234531.A.b.b.b.a.b #17	ENSGT01030000234531.A.b.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.a.a #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Lemuriformes_a	ANCESTRAL SPECIES	7	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b.b #17	ENSGT01030000234531.A.b.b.b.a.a #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Coquerels sifaka	MODERN SPECIES	900	MFN2 (ENSPCOG00000010547)	MIIP (ENSPCOG00000014777) #7	ENSPCOG00000022060 #8	TNFRSF1B (ENSPCOG00000018465) #9	VPS13D (ENSPCOG00000017635) #10	DHRS3 (ENSPCOG00000027844) #13	AADACL4 (ENSPCOG00000025753) #14	CFAP107 (ENSPCOG00000022017) #16	ENSPCOG00000023311 #17	ENSPCOG00000028229 #17	ENSPCOG00000028711 #17	ENSPCOG00000015938 #17	LRRC38 (ENSPCOG00000023206) #18	PDPN (ENSPCOG00000022665) #19	PRDM2 (ENSPCOG00000023710) #21	KAZN (ENSPCOG00000025583) #22	TMEM51 (ENSPCOG00000025555) #23	FHAD1 (ENSPCOG00000017698) #24	EFHD2 (ENSPCOG00000014457) #25	CTRC (ENSPCOG00000014099) #26	ENSPCOG00000018911	CASP9 (ENSPCOG00000027379) #27	DNAJC16 (ENSPCOG00000021369) #28	AGMAT (ENSPCOG00000005823) #29	DDI2 (ENSPCOG00000011783) #30	PLEKHM2 (ENSPCOG00000023290) #32	SLC25A34 (ENSPCOG00000017561) #33	TMEM82 (ENSPCOG00000012886) #34	FBLIM1 (ENSPCOG00000021197) #35	SPEN (ENSPCOG00000021735) #36	ZBTB17 (ENSPCOG00000003554) #37
Greater bamboo lemur	MODERN SPECIES	166	MFN2 (ENSPSMG00000014294)	MIIP (ENSPSMG00000014217) #7	TNFRSF8 (ENSPSMG00000014207) #8	TNFRSF1B (ENSPSMG00000014195) #9	VPS13D (ENSPSMG00000013901) #10	DHRS3 (ENSPSMG00000013313) #13	AADACL4 (ENSPSMG00000013305) #14	CFAP107 (ENSPSMG00000013301) #16	ENSPSMG00000013286 #17	ENSPSMG00000013280 #17	ENSPSMG00000013272 #17	LRRC38 (ENSPSMG00000013268) #18	ENSPSMG00000013262 #19	PRDM2 (ENSPSMG00000013250) #21	ENSPSMG00000013232	KAZN (ENSPSMG00000013157) #22	ENSPSMG00000013074	TMEM51 (ENSPSMG00000013065) #23	FHAD1 (ENSPSMG00000013063) #24	EFHD2 (ENSPSMG00000013047) #25	CTRC (ENSPSMG00000013040) #26	ENSPSMG00000013036	CASP9 (ENSPSMG00000013007) #27	DNAJC16 (ENSPSMG00000012961) #28
Mouse lemur	MODERN SPECIES	11	NPPA (ENSMICG00000003392)	NPPB (ENSMICG00000032500)	KIAA2013 (ENSMICG00000001756)	PLOD1 (ENSMICG00000002720)	MFN2 (ENSMICG00000002730)	MIIP (ENSMICG00000038774) #7	TNFRSF8 (ENSMICG00000012084) #8	TNFRSF1B (ENSMICG00000012100) #9	VPS13D (ENSMICG00000012119) #10	DHRS3 (ENSMICG00000012203) #13	ENSMICG00000047522 #17	ENSMICG00000011663 #17	LRRC38 (ENSMICG00000046922) #18	ENSMICG00000017804 #19	PRDM2 (ENSMICG00000017803) #21	KAZN (ENSMICG00000003804) #22	TMEM51 (ENSMICG00000033140) #23	FHAD1 (ENSMICG00000003833) #24	EFHD2 (ENSMICG00000030850) #25	CTRC (ENSMICG00000003309) #26	ENSMICG00000046629	CASP9 (ENSMICG00000003854) #27	DNAJC16 (ENSMICG00000003462) #28	AGMAT (ENSMICG00000045332) #29	RSC1A1 (ENSMICG00000013122) #31	PLEKHM2 (ENSMICG00000013125) #32	SLC25A34 (ENSMICG00000036236) #33	TMEM82 (ENSMICG00000044062) #34	FBLIM1 (ENSMICG00000007384) #35	SPEN (ENSMICG00000030994) #36	ZBTB17 (ENSMICG00000001933) #37
Bushbaby	MODERN SPECIES	124	NRIP1 (ENSOGAG00000007232)	USP25 (ENSOGAG00000013720)	ENSOGAG00000032134	CXADR (ENSOGAG00000013301)	ENSOGAG00000013303	C21orf91 (ENSOGAG00000013306)	CHODL (ENSOGAG00000028485)	TMPRSS15 (ENSOGAG00000014298)	NCAM2 (ENSOGAG00000002889)	MRPL39 (ENSOGAG00000001642)	JAM2 (ENSOGAG00000001645)	GABPA (ENSOGAG00000001648)	ENSOGAG00000033847	ADAMTS1 (ENSOGAG00000029316)	ADAMTS5 (ENSOGAG00000013024)	KAZN (ENSOGAG00000007214) #22	TMEM51 (ENSOGAG00000009791) #23	ENSOGAG00000025217 #24	EFHD2 (ENSOGAG00000025793) #25	CTRC (ENSOGAG00000009802) #26	ENSOGAG00000029665	CASP9 (ENSOGAG00000009809) #27	DNAJC16 (ENSOGAG00000005431) #28	AGMAT (ENSOGAG00000005438) #29	DDI2 (ENSOGAG00000027709) #30	RSC1A1 (ENSOGAG00000005439) #31	PLEKHM2 (ENSOGAG00000008570) #32	SLC25A34 (ENSOGAG00000033455) #33	TMEM82 (ENSOGAG00000008573) #34	SPEN (ENSOGAG00000025110) #36	ZBTB17 (ENSOGAG00000005075) #37
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000163565	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b #17	ENSGT01030000234531.A.b.b.b.a #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Tarsier	MODERN SPECIES	3305															ENSTSYG00000035711	KAZN (ENSTSYG00000004799) #22	TMEM51 (ENSTSYG00000032579) #23
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000163565	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b.f #17	ENSGT01030000234531.A.b.b.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.a #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000154570.b.u #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000154570.b.u #22
Marmoset	MODERN SPECIES	19	PLOD1 (ENSCJAG00000013459)	MFN2 (ENSCJAG00000013494)	MIIP (ENSCJAG00000013541) #7	ENSCJAG00000013559 #8	TNFRSF1B (ENSCJAG00000013571) #9	VPS13D (ENSCJAG00000013580) #10	ENSCJAG00000084788	DHRS3 (ENSCJAG00000013708) #13	ENSCJAG00000076214	ENSCJAG00000013722 #15	CFAP107 (ENSCJAG00000040949) #16	ENSCJAG00000013747 #17	LRRC38 (ENSCJAG00000013769) #18	PDPN (ENSCJAG00000013772) #19	PRDM2 (ENSCJAG00000013782) #21	KAZN (ENSCJAG00000008920) #22	TMEM51 (ENSCJAG00000008910) #23	FHAD1 (ENSCJAG00000008888) #24	EFHD2 (ENSCJAG00000068517) #25	CTRC (ENSCJAG00000008844) #26	ENSCJAG00000008785	CASP9 (ENSCJAG00000008732) #27	DNAJC16 (ENSCJAG00000008656) #28	ENSCJAG00000084076	AGMAT (ENSCJAG00000008645) #29	DDI2 (ENSCJAG00000008625) #30	RSC1A1 (ENSCJAG00000040229) #31	PLEKHM2 (ENSCJAG00000008601) #32	SLC25A34 (ENSCJAG00000008596) #33	TMEM82 (ENSCJAG00000008582) #34	FBLIM1 (ENSCJAG00000008580) #35
Mas night monkey	MODERN SPECIES	760	TUBA8 (ENSANAG00000020993)	PEX26 (ENSANAG00000033468)	ENSANAG00000024037	MICAL3 (ENSANAG00000021919)	BID (ENSANAG00000035339)	BCL2L13 (ENSANAG00000017578)	ENSANAG00000037241	SLC25A18 (ENSANAG00000036909)	ENSANAG00000021362	CECR2 (ENSANAG00000035159)	ENSANAG00000038012	ENSANAG00000027660	HDHD5 (ENSANAG00000022048)	TMEM121B (ENSANAG00000024835)	ENSANAG00000033260	ENSANAG00000031012 #22	ENSANAG00000025732	ENSANAG00000034686	RTN4R (ENSANAG00000032599)	CCDC188 (ENSANAG00000028823)	ZDHHC8 (ENSANAG00000032330)	ENSANAG00000024454	TRMT2A (ENSANAG00000035461)	DGCR8 (ENSANAG00000013710)	TANGO2 (ENSANAG00000035133)	ARVCF (ENSANAG00000029182)	COMT (ENSANAG00000024217)	TXNRD2 (ENSANAG00000020052)	GNB1L (ENSANAG00000015533)	TBX1 (ENSANAG00000024241)	GP1BB (ENSANAG00000033423)
Platyrrhini	ANCESTRAL SPECIES		ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.a #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b.v #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Cebidae	ANCESTRAL SPECIES	1	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000163565	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.a #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b.v #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Cebidae_a	ANCESTRAL SPECIES		ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000163565	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.a #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b.v #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Capuchin	MODERN SPECIES	15	MFN2 (ENSCCAG00000026866)	MIIP (ENSCCAG00000026110) #7	TNFRSF8 (ENSCCAG00000037813) #8	TNFRSF1B (ENSCCAG00000020210) #9	VPS13D (ENSCCAG00000037026) #10	ENSCCAG00000032853	DHRS3 (ENSCCAG00000019005) #13	AADACL4 (ENSCCAG00000031095) #14	AADACL3 (ENSCCAG00000015991) #15	CFAP107 (ENSCCAG00000023379) #16	ENSCCAG00000032669 #17	ENSCCAG00000034267 #17	LRRC38 (ENSCCAG00000016310) #18	PDPN (ENSCCAG00000021068) #19	PRDM2 (ENSCCAG00000025776) #21	KAZN (ENSCCAG00000023463) #22	ENSCCAG00000025007	ENSCCAG00000037569	TMEM51 (ENSCCAG00000033420) #23	FHAD1 (ENSCCAG00000035375) #24	EFHD2 (ENSCCAG00000019849) #25	CTRC (ENSCCAG00000037721) #26	ENSCCAG00000025250	CASP9 (ENSCCAG00000020237) #27	DNAJC16 (ENSCCAG00000022839) #28	ENSCCAG00000034120	AGMAT (ENSCCAG00000030030) #29	DDI2 (ENSCCAG00000036965) #30	PLEKHM2 (ENSCCAG00000028587) #32	SLC25A34 (ENSCCAG00000030859) #33	TMEM82 (ENSCCAG00000019233) #34
Bolivian squirrel monkey	MODERN SPECIES	110													LRRC38 (ENSSBOG00000033893) #18	ENSSBOG00000028333 #19	PRDM2 (ENSSBOG00000018480) #21	KAZN (ENSSBOG00000033671) #22	TMEM51 (ENSSBOG00000033958) #23	FHAD1 (ENSSBOG00000000586) #24	EFHD2 (ENSSBOG00000032949) #25	CTRC (ENSSBOG00000025369) #26	ENSSBOG00000030351	CASP9 (ENSSBOG00000009264) #27	ENSSBOG00000024838	DNAJC16 (ENSSBOG00000035624) #28	AGMAT (ENSSBOG00000034495) #29	RSC1A1 (ENSSBOG00000032268) #31	PLEKHM2 (ENSSBOG00000033401) #32	SLC25A34 (ENSSBOG00000029337) #33	TMEM82 (ENSSBOG00000026126) #34	FBLIM1 (ENSSBOG00000019159) #35	SPEN (ENSSBOG00000028770) #36
Mas night monkey	MODERN SPECIES	1281											LRRC38 (ENSANAG00000026363) #18	PDPN (ENSANAG00000031735) #19	PRDM2 (ENSANAG00000035735) #21	ENSANAG00000028761	ENSANAG00000027957	ENSANAG00000021055 #22	TMEM51 (ENSANAG00000029829) #23	FHAD1 (ENSANAG00000032478) #24	EFHD2 (ENSANAG00000038054) #25	CTRC (ENSANAG00000038501) #26	ENSANAG00000007520	CASP9 (ENSANAG00000034956) #27	ENSANAG00000036452	DNAJC16 (ENSANAG00000026140) #28	AGMAT (ENSANAG00000026751) #29	RSC1A1 (ENSANAG00000030823) #31	PLEKHM2 (ENSANAG00000037103) #32	SLC25A34 (ENSANAG00000036756) #33	TMEM82 (ENSANAG00000026990) #34	FBLIM1 (ENSANAG00000032942) #35	SPEN (ENSANAG00000034428) #36
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b.f.b #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b #17	ENSGT01030000234531.A.b.b.b.a.e #17	ENSGT01030000234531.A.b.b.b.b.b.f.a #17	ENSGT01030000234531.A.b.b.b.b.b.e.a #17	ENSGT01030000234531.A.b.b.b.a.f #17	ENSGT00940000162571 #18	ENSGT00950000183107.a.b.a.tb.a	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a.pb	ENSGT01030000234528.B.a.a.qb	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a.e #17	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.b #17	ENSGT01030000234531.A.b.b.b.a.e.a #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b #17	ENSGT01030000234531.A.b.b.b.a.e.b #17	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.a #17	ENSGT01030000234531.A.b.b.b.b.b.e.a #17	ENSGT01030000234531.A.b.b.b.a.f #17	ENSGT00940000162571 #18	ENSGT00950000183107.a.b.a.tb.a	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a.pb	ENSGT01030000234528.B.a.a.qb	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003.f #35
Hominidae	ANCESTRAL SPECIES	3	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a.e #17	ENSGT01030000234531.A.b.b.b.b.b.f.b #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.a.f #17	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.a #17	ENSGT01030000234531.A.b.b.b.a.e.b.b #17	ENSGT01030000234531.A.b.b.b.b.b.f.a.b #17	ENSGT01030000234531.A.b.b.b.b.b.e.a #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b #17	ENSGT01030000234531.A.b.b.b.a.f #17	ENSGT00940000162571 #18	ENSGT00950000183107.a.b.a.tb.a	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a.pb	ENSGT01030000234528.B.a.a.qb	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003.f #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a.e #17	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.b #17	ENSGT01030000234531.A.b.b.b.a.e.a #17	ENSGT00940000153402.c.b.a.b.a.a	ENSGT01030000234531.A.b.b.b.a.e.b.b.c #17	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.a.b.a #17	ENSGT01030000234531.A.b.b.b.b.b.e.a.b #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b #17	ENSGT01030000234531.A.b.b.b.a.f #17	ENSGT00940000162571 #18	ENSGT00950000183107.a.b.a.tb.a	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000009710.p.a	ENSGT00940000154570.b #22	ENSGT00940000167437.a	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a.pb	ENSGT01030000234528.B.a.a.qb	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a.e #17	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.b #17	ENSGT01030000234531.A.b.b.b.a.e.a #17	ENSGT00940000153402.c.b.a.b.a.a.d	ENSGT01030000234531.A.b.b.b.a.e.b.b.c #17	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.a.b.a #17	ENSGT01030000234531.A.b.b.b.b.b.e.a.b #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b #17	ENSGT01030000234531.A.b.b.b.a.f #17	ENSGT00940000162571 #18	ENSGT00950000183107.a.b.a.tb.a	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000009710.p.a	ENSGT00940000154570.b #22	ENSGT00940000167437.a	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a.pb	ENSGT01030000234528.B.a.a.qb	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33
Pan	ANCESTRAL SPECIES		ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a.e #17	ENSGT01030000234531.A.b.b.b.b.b.f.a.a.b #17	ENSGT01030000234531.A.b.b.b.a.e.a #17	ENSGT01030000234531.A.b.b.b.b.b.f.a.b #17	ENSGT01030000234531.A.b.b.b.b.b.e.a.b #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b #17	ENSGT01030000234531.A.b.b.b.a.f #17	ENSGT00940000162571 #18	ENSGT00950000183107.a.b.a.tb.a	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000009710.p.a	ENSGT00940000154570.b #22	ENSGT00940000167437.a	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a.pb	ENSGT01030000234528.B.a.a.qb	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33
Chimpanzee	MODERN SPECIES		AADACL4 (ENSPTRG00000030826) #14	AADACL3 (ENSPTRG00000000168) #15	CFAP107 (ENSPTRG00000000170) #16	PRAMEF12 (ENSPTRG00000030821) #17	ENSPTRG00000031360 #17	ENSPTRG00000030818 #17	ENSPTRG00000030823 #17	ENSPTRG00000030824 #17	PRAMEF19 (ENSPTRG00000030819) #17	PRAMEF17 (ENSPTRG00000030820) #17	PRAMEF20 (ENSPTRG00000041322) #17	LRRC38 (ENSPTRG00000000182) #18	ENSPTRG00000042868	PDPN (ENSPTRG00000000184) #19	PRDM2 (ENSPTRG00000000185) #21	KAZN (ENSPTRG00000000186) #22	ENSPTRG00000049061	ENSPTRG00000030816	ENSPTRG00000048250	TMEM51 (ENSPTRG00000000193) #23	FHAD1 (ENSPTRG00000000194) #24	EFHD2 (ENSPTRG00000050778) #25	CTRC (ENSPTRG00000000197) #26	CELA2A (ENSPTRG00000034262)	CELA2B (ENSPTRG00000049760)	CASP9 (ENSPTRG00000000200) #27	DNAJC16 (ENSPTRG00000000201) #28	AGMAT (ENSPTRG00000000202) #29	DDI2 (ENSPTRG00000024059) #30	PLEKHM2 (ENSPTRG00000000205) #32	SLC25A34 (ENSPTRG00000000206) #33
Bonobo	MODERN SPECIES		TNFRSF8 (ENSPPAG00000033492) #8	TNFRSF1B (ENSPPAG00000033471) #9	VPS13D (ENSPPAG00000033746) #10	DHRS3 (ENSPPAG00000043366) #13	ENSPPAG00000043843	CFAP107 (ENSPPAG00000033402) #16	PRAMEF12 (ENSPPAG00000038324) #17	ENSPPAG00000030003 #17	ENSPPAG00000013902 #17	PRAMEF17 (ENSPPAG00000027375) #17	PRAMEF20 (ENSPPAG00000034456) #17	LRRC38 (ENSPPAG00000027892) #18	ENSPPAG00000030116	ENSPPAG00000039265 #19	PRDM2 (ENSPPAG00000036677) #21	KAZN (ENSPPAG00000007694) #22	ENSPPAG00000030734	ENSPPAG00000009276	TMEM51 (ENSPPAG00000027626) #23	FHAD1 (ENSPPAG00000013425) #24	EFHD2 (ENSPPAG00000029402) #25	CTRC (ENSPPAG00000033889) #26	CELA2A (ENSPPAG00000030039)	CELA2B (ENSPPAG00000041434)	CASP9 (ENSPPAG00000043312) #27	DNAJC16 (ENSPPAG00000038752) #28	AGMAT (ENSPPAG00000027720) #29	DDI2 (ENSPPAG00000038331) #30	RSC1A1 (ENSPPAG00000024018) #31	PLEKHM2 (ENSPPAG00000036158) #32	SLC25A34 (ENSPPAG00000042365) #33
Human	MODERN SPECIES		HNRNPCL4 (ENSG00000179412)	PRAMEF9 (ENSG00000204505) #17	PRAMEF13 (ENSG00000279169) #17	PRAMEF18 (ENSG00000279804) #17	PRAMEF5 (ENSG00000270601) #17	PRAMEF8 (ENSG00000182330) #17	PRAMEF33 (ENSG00000237700) #17	PRAMEF15 (ENSG00000204501) #17	PRAMEF14 (ENSG00000204481) #17	PRAMEF19 (ENSG00000204480) #17	PRAMEF17 (ENSG00000204479) #17	PRAMEF20 (ENSG00000204478) #17	LRRC38 (ENSG00000162494) #18	PDPN (ENSG00000162493) #19	PRDM2 (ENSG00000116731) #21	KAZN (ENSG00000189337) #22	TMEM51 (ENSG00000171729) #23	FHAD1 (ENSG00000142621) #24	EFHD2 (ENSG00000142634) #25	CTRC (ENSG00000162438) #26	CELA2A (ENSG00000142615)	CELA2B (ENSG00000215704)	CASP9 (ENSG00000132906) #27	DNAJC16 (ENSG00000116138) #28	AGMAT (ENSG00000116771) #29	DDI2 (ENSG00000197312) #30	RSC1A1 (ENSG00000215695) #31	PLEKHM2 (ENSG00000116786) #32	SLC25A34 (ENSG00000162461) #33	TMEM82 (ENSG00000162460) #34	FBLIM1 (ENSG00000162458) #35
Gorilla	MODERN SPECIES		ENSGGOG00000024298 #17	ENSGGOG00000009211 #17	ENSGGOG00000002008 #17	ENSGGOG00000023201 #17	PRAMEF18 (ENSGGOG00000027485) #17	ENSGGOG00000040856 #17	ENSGGOG00000001999 #17	ENSGGOG00000025050 #17	ENSGGOG00000027127 #17	PRAMEF17 (ENSGGOG00000002014) #17	ENSGGOG00000023851 #17	LRRC38 (ENSGGOG00000003598) #18	ENSGGOG00000006226	ENSGGOG00000010242 #19	PRDM2 (ENSGGOG00000005678) #21	KAZN (ENSGGOG00000013613) #22	ENSGGOG00000038135	ENSGGOG00000007474	TMEM51 (ENSGGOG00000028096) #23	FHAD1 (ENSGGOG00000000691) #24	EFHD2 (ENSGGOG00000006667) #25	CTRC (ENSGGOG00000006673) #26	CELA2A (ENSGGOG00000013964)	CELA2B (ENSGGOG00000036765)	CASP9 (ENSGGOG00000001961) #27	DNAJC16 (ENSGGOG00000002611) #28	AGMAT (ENSGGOG00000015172) #29	ENSGGOG00000028428	DDI2 (ENSGGOG00000013537) #30	PLEKHM2 (ENSGGOG00000015173) #32	SLC25A34 (ENSGGOG00000015182) #33
Orangutan	MODERN SPECIES		ENSPPYG00000032923 #17	ENSPPYG00000041518 #17	ENSPPYG00000037430 #17	ENSPPYG00000040014 #17	ENSPPYG00000036925 #17	ENSPPYG00000038915 #17	ENSPPYG00000030931	ENSPPYG00000031128 #17	ENSPPYG00000001860	ENSPPYG00000035652 #17	ENSPPYG00000030098 #17	LRRC38 (ENSPPYG00000010676) #18	ENSPPYG00000001857	ENSPPYG00000001856 #19	PRDM2 (ENSPPYG00000001855) #21	KAZN (ENSPPYG00000001854) #22	ENSPPYG00000001850 #23	FHAD1 (ENSPPYG00000001848) #24	EFHD2 (ENSPPYG00000036146) #25	CTRC (ENSPPYG00000001846) #26	CELA2A (ENSPPYG00000034416)	ENSPPYG00000010674	CELA2B (ENSPPYG00000001845)	CASP9 (ENSPPYG00000001844) #27	DNAJC16 (ENSPPYG00000001843) #28	AGMAT (ENSPPYG00000001842) #29	DDI2 (ENSPPYG00000001841) #30	RSC1A1 (ENSPPYG00000031265) #31	PLEKHM2 (ENSPPYG00000001840) #32	SLC25A34 (ENSPPYG00000037176) #33	TMEM82 (ENSPPYG00000001838) #34
Gibbon	MODERN SPECIES	16	CFAP107 (ENSNLEG00000009848) #16	ENSNLEG00000033314 #17	ENSNLEG00000030346 #17	ENSNLEG00000009851 #17	ENSNLEG00000031836 #17	ENSNLEG00000036088 #17	ENSNLEG00000009861 #17	ENSNLEG00000009866 #17	ENSNLEG00000009870 #17	ENSNLEG00000009879 #17	PRAMEF20 (ENSNLEG00000009881) #17	LRRC38 (ENSNLEG00000009883) #18	ENSNLEG00000032775	ENSNLEG00000036224 #19	PRDM2 (ENSNLEG00000009887) #21	KAZN (ENSNLEG00000007579) #22	ENSNLEG00000009890	ENSNLEG00000032060	TMEM51 (ENSNLEG00000007586) #23	FHAD1 (ENSNLEG00000007592) #24	EFHD2 (ENSNLEG00000007602) #25	CTRC (ENSNLEG00000007606) #26	CELA2A (ENSNLEG00000026921)	CELA2B (ENSNLEG00000007611)	CASP9 (ENSNLEG00000007614) #27	DNAJC16 (ENSNLEG00000007619) #28	AGMAT (ENSNLEG00000007628) #29	DDI2 (ENSNLEG00000018559) #30	PLEKHM2 (ENSNLEG00000007636) #32	SLC25A34 (ENSNLEG00000007644) #33	TMEM82 (ENSNLEG00000007645) #34
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b.f.b #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c #17	ENSGT00940000153402.c.b.a.b.a.a	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d #17	ENSGT01030000234531.A.b.b.b.a.e #17	ENSGT01030000234531.A.b.b.b.b.b.f.a #17	ENSGT01030000234531.A.b.b.b.b.b.e.a #17	ENSGT01030000234531.A.b.b.b.a.f #17	ENSGT00940000163979	ENSGT00940000162571 #18	ENSGT00950000183107.a.b.a.tb.a	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a.pb.c	ENSGT01030000234528.B.a.a.qb	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34
Rhinopithecus	ANCESTRAL SPECIES	936															ENSGT00940000159410 #21	ENSGT00940000154570.b #22
Black snub-nosed monkey	MODERN SPECIES	1975															PRDM2 (ENSRBIG00000030596) #21	KAZN (ENSRBIG00000034054) #22
Golden snub-nosed monkey	MODERN SPECIES	2071															PRDM2 (ENSRROG00000041096) #21	KAZN (ENSRROG00000031681) #22
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b.f.b #17	ENSGT01030000234531.A.b.b.b.a.e.d #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d #17	ENSGT01030000234531.A.b.b.b.a.e.c #17	ENSGT01030000234531.A.b.b.b.b.b.f.a #17	ENSGT01030000234531.A.b.b.b.b.b.e.a #17	ENSGT01030000234531.A.b.b.b.a.f #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b.d #26	ENSGT01030000234528.B.a.a.pb.d.b.b	ENSGT00940000153216.a.b.c #26	ENSGT01030000234528.B.a.a.pb.c	ENSGT01030000234528.B.a.a.qb	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32
Vervet Monkey	MODERN SPECIES	12	DHRS3 (ENSCSAG00000000811) #13	ENSCSAG00000000812	AADACL3 (ENSCSAG00000000813) #15	CFAP107 (ENSCSAG00000000814) #16	PRAMEF12 (ENSCSAG00000000815) #17	ENSCSAG00000000637	ENSCSAG00000000816 #17	ENSCSAG00000000817 #17	ENSCSAG00000000818 #17	ENSCSAG00000000819 #17	ENSCSAG00000000820 #17	PRAMEF20 (ENSCSAG00000000821) #17	LRRC38 (ENSCSAG00000000822) #18	PDPN (ENSCSAG00000000823) #19	PRDM2 (ENSCSAG00000000824) #21	KAZN (ENSCSAG00000000825) #22	TMEM51 (ENSCSAG00000000827) #23	ENSCSAG00000000828 #24	FHAD1 (ENSCSAG00000000829) #24	EFHD2 (ENSCSAG00000000830) #25	CTRC (ENSCSAG00000000831) #26	CELA2B (ENSCSAG00000000832)	CASP9 (ENSCSAG00000000833) #27	DNAJC16 (ENSCSAG00000000834) #28	AGMAT (ENSCSAG00000000835) #29	RSC1A1 (ENSCSAG00000000836) #31	PLEKHM2 (ENSCSAG00000000837) #32	SLC25A34 (ENSCSAG00000000838) #33	TMEM82 (ENSCSAG00000000839) #34	FBLIM1 (ENSCSAG00000000840) #35	SPEN (ENSCSAG00000000841) #36
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b.f.b #17	ENSGT01030000234531.A.b.b.b.a.e.d #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d #17	ENSGT01030000234531.A.b.b.b.a.e.c #17	ENSGT01030000234531.A.b.b.b.b.b.f.a #17	ENSGT01030000234531.A.b.b.b.b.b.e.a #17	ENSGT01030000234531.A.b.b.b.a.f #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b.d #26	ENSGT01030000234528.B.a.a.pb.d.b.b	ENSGT00940000153216.a.b.c #26	ENSGT01030000234528.B.a.a.pb.c	ENSGT01030000234528.B.a.a.qb	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32
Macaca	ANCESTRAL SPECIES		ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b.f.b #17	ENSGT01030000234531.A.b.b.b.a.e.d #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d #17	ENSGT01030000234531.A.b.b.b.a.e.c #17	ENSGT01030000234531.A.b.b.b.b.b.f.a #17	ENSGT01030000234531.A.b.b.b.b.b.e.a #17	ENSGT01030000234531.A.b.b.b.a.f #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009776.j.b	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b.d #26	ENSGT01030000234528.B.a.a.pb.d.b.b	ENSGT00940000153216.a.b.c #26	ENSGT01030000234528.B.a.a.pb.c	ENSGT01030000234528.B.a.a.qb	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33
Pig-tailed macaque	MODERN SPECIES	508	DHRS3 (ENSMNEG00000035781) #13	AADACL4 (ENSMNEG00000044859) #14	AADACL3 (ENSMNEG00000034202) #15	CFAP107 (ENSMNEG00000039150) #16	PRAMEF12 (ENSMNEG00000029190) #17	ENSMNEG00000035213 #17	ENSMNEG00000039998 #17	ENSMNEG00000029126 #17	ENSMNEG00000030236 #17	ENSMNEG00000033443 #17	ENSMNEG00000041850 #17	PRAMEF20 (ENSMNEG00000043597) #17	LRRC38 (ENSMNEG00000043446) #18	PDPN (ENSMNEG00000043777) #19	PRDM2 (ENSMNEG00000039705) #21	KAZN (ENSMNEG00000038651) #22	ENSMNEG00000027989	TMEM51 (ENSMNEG00000030790) #23	FHAD1 (ENSMNEG00000045473) #24	EFHD2 (ENSMNEG00000029503) #25	CTRC (ENSMNEG00000029283) #26	ENSMNEG00000033814	ENSMNEG00000034527	CELA2B (ENSMNEG00000035015)	CASP9 (ENSMNEG00000032453) #27	DNAJC16 (ENSMNEG00000015068) #28	AGMAT (ENSMNEG00000038882) #29	RSC1A1 (ENSMNEG00000027911) #31	PLEKHM2 (ENSMNEG00000027232) #32	SLC25A34 (ENSMNEG00000029592) #33	TMEM82 (ENSMNEG00000044140) #34
Macaca_a	ANCESTRAL SPECIES		ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b.f.b #17	ENSGT01030000234531.A.b.b.b.a.e.d #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d #17	ENSGT01030000234531.A.b.b.b.a.e.c #17	ENSGT01030000234531.A.b.b.b.b.b.f.a #17	ENSGT01030000234531.A.b.b.b.b.b.e.a #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00910000148116	ENSGT01100000263493.a.b.b.a.a.a.a.a.b	ENSGT01100000263493.a.b.a.b.a.a.b.a.b.b.b.a.b.a.b	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.b.a	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b.c #26	ENSGT01030000234528.B.a.a.pb.c	ENSGT01030000234528.B.a.a.qb	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35
Rhesus	MODERN SPECIES		CFAP107 (ENSMMUG00000021870) #16	PRAMEF12 (ENSMMUG00000056436) #17	ENSMMUG00000057550 #17	ENSMMUG00000054309 #17	ENSMMUG00000055233 #17	ENSMMUG00000056227 #17	ENSMMUG00000058440 #17	ENSMMUG00000054892 #17	ENSMMUG00000058407 #17	LRRC38 (ENSMMUG00000053824) #18	PDPN (ENSMMUG00000000145) #19	PRDM2 (ENSMMUG00000017040) #21	ENSMMUG00000050642	ENSMMUG00000059275	ENSMMUG00000059157	KAZN (ENSMMUG00000023070) #22	TMEM51 (ENSMMUG00000006164) #23	FHAD1 (ENSMMUG00000003987) #24	ENSMMUG00000053235	EFHD2 (ENSMMUG00000050246) #25	ENSMMUG00000058742	ENSMMUG00000060541 #26	ENSMMUG00000053550	ENSMMUG00000064552	CELA2B (ENSMMUG00000031821)	CASP9 (ENSMMUG00000018163) #27	DNAJC16 (ENSMMUG00000032244) #28	AGMAT (ENSMMUG00000002802) #29	RSC1A1 (ENSMMUG00000019912) #31	PLEKHM2 (ENSMMUG00000016281) #32	SLC25A34 (ENSMMUG00000060152) #33
Crab-eating macaque	DUPLICATION
Crab-eating macaque	MODERN SPECIES		ENSMFAG00000064937 #17	ENSMFAG00000051805 #17	ENSMFAG00000003419 #17	ENSMFAG00000032967 #17	ENSMFAG00000042798 #17	PRAMEF20 (ENSMFAG00000037490) #17	ENSMFAG00000065006	ENSMFAG00000035413	PDPN (ENSMFAG00000001482) #19	ENSMFAG00000037989 #21	ENSMFAG00000060287	ENSMFAG00000061860	ENSMFAG00000053475	ENSMFAG00000060810	ENSMFAG00000033310 #22	ENSMFAG00000050473 #22	TMEM51 (ENSMFAG00000031613) #23	ENSMFAG00000030840 #24	ENSMFAG00000044896 #25	ENSMFAG00000058946	CELA2B (ENSMFAG00000034080)	CASP9 (ENSMFAG00000044632) #27	DNAJC16 (ENSMFAG00000036417) #28	AGMAT (ENSMFAG00000055350) #29	RSC1A1 (ENSMFAG00000040011) #31	PLEKHM2 (ENSMFAG00000044082) #32	SLC25A34 (ENSMFAG00000060774) #33	ENSMFAG00000055220	TMEM82 (ENSMFAG00000044352) #34	FBLIM1 (ENSMFAG00000044716) #35	ENSMFAG00000044321
Crab-eating macaque	MODERN SPECIES		ENSMFAG00000037280 #17	ENSMFAG00000064937 #17	ENSMFAG00000051805 #17	ENSMFAG00000003419 #17	ENSMFAG00000032967 #17	ENSMFAG00000042798 #17	PRAMEF20 (ENSMFAG00000037490) #17	ENSMFAG00000065006	ENSMFAG00000035413	PDPN (ENSMFAG00000001482) #19	ENSMFAG00000037989 #21	ENSMFAG00000060287	ENSMFAG00000061860	ENSMFAG00000053475	ENSMFAG00000060810	ENSMFAG00000033310 #22	ENSMFAG00000050473 #22	TMEM51 (ENSMFAG00000031613) #23	ENSMFAG00000030840 #24	ENSMFAG00000044896 #25	ENSMFAG00000058946	CELA2B (ENSMFAG00000034080)	CASP9 (ENSMFAG00000044632) #27	DNAJC16 (ENSMFAG00000036417) #28	AGMAT (ENSMFAG00000055350) #29	RSC1A1 (ENSMFAG00000040011) #31	PLEKHM2 (ENSMFAG00000044082) #32	SLC25A34 (ENSMFAG00000060774) #33	ENSMFAG00000055220	TMEM82 (ENSMFAG00000044352) #34	FBLIM1 (ENSMFAG00000044716) #35
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b.f.b #17	ENSGT01030000234531.A.b.b.b.a.e.d #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d #17	ENSGT01030000234531.A.b.b.b.a.e.c #17	ENSGT01030000234531.A.b.b.b.b.b.f.a #17	ENSGT01030000234531.A.b.b.b.b.b.e.a #17	ENSGT01030000234531.A.b.b.b.a.f #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b.d #26	ENSGT01030000234528.B.a.a.qb	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Olive baboon	MODERN SPECIES		MIIP (ENSPANG00000014730) #7	TNFRSF8 (ENSPANG00000007874) #8	TNFRSF1B (ENSPANG00000006627) #9	VPS13D (ENSPANG00000008050) #10	DHRS3 (ENSPANG00000013326) #13	AADACL4 (ENSPANG00000009070) #14	AADACL3 (ENSPANG00000000763) #15	CFAP107 (ENSPANG00000013325) #16	ENSPANG00000032026 #17	ENSPANG00000019717	ENSPANG00000008813 #17	ENSPANG00000013765 #17	LRRC38 (ENSPANG00000050121) #18	PDPN (ENSPANG00000009068) #19	PRDM2 (ENSPANG00000007508) #21	KAZN (ENSPANG00000005382) #22	ENSPANG00000040374	ENSPANG00000045260 #23	ENSPANG00000019569 #24	EFHD2 (ENSPANG00000021488) #25	CELA2B (ENSPANG00000015026)	CASP9 (ENSPANG00000001073) #27	DNAJC16 (ENSPANG00000015571) #28	AGMAT (ENSPANG00000019715) #29	DDI2 (ENSPANG00000015838) #30	RSC1A1 (ENSPANG00000041977) #31	PLEKHM2 (ENSPANG00000012689) #32	SLC25A34 (ENSPANG00000020306) #33	TMEM82 (ENSPANG00000018591) #34	FBLIM1 (ENSPANG00000019414) #35	SPEN (ENSPANG00000006293) #36
Cercopithecinae_d	ANCESTRAL SPECIES	42	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.a.e.c #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d #17	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c #17	ENSGT01030000234531.A.b.b.b.a.e.d #17	ENSGT01030000234531.A.b.b.b.b.b.f.b #17	ENSGT01030000234531.A.b.b.b.b.a #17	ENSGT01030000234531.A.b.b.b.b.b.f.a #17	ENSGT01030000234531.A.b.b.b.b.b.e.a #17	ENSGT01030000234531.A.b.b.b.a.f #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b.d #26	ENSGT00940000153216.a.b.c #26	ENSGT01030000234528.B.a.a.pb.d.b.a
Sooty mangabey	MODERN SPECIES	207				ENSCATG00000032922 #17	ENSCATG00000015317 #17	ENSCATG00000024574 #17	ENSCATG00000030660 #17	ENSCATG00000031710 #17	ENSCATG00000037206 #17	ENSCATG00000038414 #17	ENSCATG00000034140 #17	PRAMEF20 (ENSCATG00000022537) #17	LRRC38 (ENSCATG00000035670) #18	PDPN (ENSCATG00000039975) #19	PRDM2 (ENSCATG00000029261) #21	KAZN (ENSCATG00000039305) #22	TMEM51 (ENSCATG00000032156) #23	FHAD1 (ENSCATG00000034677) #24	EFHD2 (ENSCATG00000010218) #25	ENSCATG00000031108 #26	ENSCATG00000032298 #26	ENSCATG00000034453	ENSCATG00000028825
Drill	MODERN SPECIES	1510																KAZN (ENSMLEG00000023176) #22	TMEM51 (ENSMLEG00000036022) #23	FHAD1 (ENSMLEG00000039315) #24	EFHD2 (ENSMLEG00000000134) #25	ENSMLEG00000032088 #26	ENSMLEG00000033462 #26	CELA2A (ENSMLEG00000036762)
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Tree shrew	MODERN SPECIES	4846																KAZN (ENSTBEG00000001870) #22	ENSTBEG00000002855	TMEM51 (ENSTBEG00000004964) #23
Glires	ANCESTRAL SPECIES		ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Rodentia	ANCESTRAL SPECIES		ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.f #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.e.a #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630.a #14	ENSGT00940000157630.b.b #14	ENSGT00940000157630.b.a #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.e.a #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Muroidea	ANCESTRAL SPECIES	3	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630.a.a #14	ENSGT00940000157630.a.b #14	ENSGT00940000157630.b.b #14	ENSGT00940000157630.b.a #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.e.a.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	1803																ENSNGAG00000013647 #22	ENSNGAG00000018275 #22	Tmem51 (ENSNGAG00000012512) #23	Fhad1 (ENSNGAG00000002450) #24	Efhd2 (ENSNGAG00000018634) #25	ENSNGAG00000020581 #26	Cela2a (ENSNGAG00000019296)	Casp9 (ENSNGAG00000003405) #27	Dnajc16 (ENSNGAG00000013158) #28	Agmat (ENSNGAG00000006410) #29	ENSNGAG00000008573 #30	ENSNGAG00000011605 #31	Plekhm2 (ENSNGAG00000018802) #32	Slc25a34 (ENSNGAG00000019484) #33	Tmem82 (ENSNGAG00000020347) #34	Fblim1 (ENSNGAG00000017164) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	1803															ENSNGAG00000013647 #22	ENSNGAG00000018275 #22	Tmem51 (ENSNGAG00000012512) #23	Fhad1 (ENSNGAG00000002450) #24	Efhd2 (ENSNGAG00000018634) #25	ENSNGAG00000020581 #26	Cela2a (ENSNGAG00000019296)	Casp9 (ENSNGAG00000003405) #27	Dnajc16 (ENSNGAG00000013158) #28	Agmat (ENSNGAG00000006410) #29	ENSNGAG00000008573 #30	ENSNGAG00000011605 #31	Plekhm2 (ENSNGAG00000018802) #32	Slc25a34 (ENSNGAG00000019484) #33	Tmem82 (ENSNGAG00000020347) #34	Fblim1 (ENSNGAG00000017164) #35	Spen (ENSNGAG00000000641) #36
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000157630.a.a.b #14	ENSGT00940000157630.a.b #14	ENSGT00940000163565	ENSGT00940000157630.b.a #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Murinae	ANCESTRAL SPECIES	2	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37
Mus	ANCESTRAL SPECIES	3	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37
Mus_A	ANCESTRAL SPECIES	3	ENSGT01030000234531.A.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37
Mus_B	ANCESTRAL SPECIES	5	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.b.a.a.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37
Mus_C	ANCESTRAL SPECIES	2	ENSGT00860000136337	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.b.a.a.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.b.a.a.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36	ENSGT00940000159957 #37
spretus	MODERN SPECIES	13	MGP_SPRETEiJ_G0027754 #17	MGP_SPRETEiJ_G0027753 #17	MGP_SPRETEiJ_G0027752 #17	MGP_SPRETEiJ_G0027751 #17	MGP_SPRETEiJ_G0027750 #17	MGP_SPRETEiJ_G0027749 #17	MGP_SPRETEiJ_G0027748 #17	MGP_SPRETEiJ_G0027747 #17	MGP_SPRETEiJ_G0027746 #17	Oog4 (MGP_SPRETEiJ_G0027745) #17	Pramel12 (MGP_SPRETEiJ_G0027744) #17	Pramel1 (MGP_SPRETEiJ_G0027743) #17	Lrrc38 (MGP_SPRETEiJ_G0027742) #18	Pdpn (MGP_SPRETEiJ_G0027741) #19	Prdm2 (MGP_SPRETEiJ_G0027740) #21	Kazn (MGP_SPRETEiJ_G0027739) #22	Tmem51 (MGP_SPRETEiJ_G0027738) #23	Fhad1 (MGP_SPRETEiJ_G0027737) #24	Efhd2 (MGP_SPRETEiJ_G0027736) #25	MGP_SPRETEiJ_G0027735	Cela2a (MGP_SPRETEiJ_G0027734)	Casp9 (MGP_SPRETEiJ_G0027733) #27	Dnajc16 (MGP_SPRETEiJ_G0027732) #28	Agmat (MGP_SPRETEiJ_G0027731) #29	MGP_SPRETEiJ_G0027730 #31	MGP_SPRETEiJ_G0027729 #31	Plekhm2 (MGP_SPRETEiJ_G0027728) #32	Slc25a34 (MGP_SPRETEiJ_G0027727) #33	Tmem82 (MGP_SPRETEiJ_G0027726) #34	Fblim1 (MGP_SPRETEiJ_G0027725) #35	Spen (MGP_SPRETEiJ_G0027724) #36
Steppe mouse	MODERN SPECIES	3329							ENSMSIG00000015535 #17	Oog4 (ENSMSIG00000015458) #17	Pramel12 (ENSMSIG00000015426) #17	Pramel1 (ENSMSIG00000015411) #17	ENSMSIG00000015393 #18	Pdpn (ENSMSIG00000015317) #19	ENSMSIG00000015307	Prdm2 (ENSMSIG00000015257) #21	ENSMSIG00000015235 ##22	Kazn (ENSMSIG00000015206) #22	ENSMSIG00000015199	Tmem51 (ENSMSIG00000015190) #23	Fhad1 (ENSMSIG00000014775) #24	Efhd2 (ENSMSIG00000014750) #25	ENSMSIG00000014707 #26	Cela2a (ENSMSIG00000014686)	Casp9 (ENSMSIG00000014653) #27	Dnajc16 (ENSMSIG00000014635) #28	Agmat (ENSMSIG00000014614) #29	ENSMSIG00000014561 #31	Plekhm2 (ENSMSIG00000014394) #32	Slc25a34 (ENSMSIG00000014377) #33	Tmem82 (ENSMSIG00000014350) #34	Fblim1 (ENSMSIG00000014313) #35	Spen (ENSMSIG00000014208) #36
Mouse	MODERN SPECIES	13	Pramel24 (ENSMUSG00000046435) #17	Pramel23 (ENSMUSG00000070617) #17	Pramel22 (ENSMUSG00000078513) #17	Pramel21 (ENSMUSG00000066688) #17	Pramel20 (ENSMUSG00000070618) #17	Gm13057 (ENSMUSG00000096154) #17	Gm13040 (ENSMUSG00000070616) #17	Gm13043 (ENSMUSG00000095409) #17	Oog4 (ENSMUSG00000047799) #17	Pramel12 (ENSMUSG00000046862) #17	Pramel1 (ENSMUSG00000041805) #17	Lrrc38 (ENSMUSG00000028584) #18	Pdpn (ENSMUSG00000028583) #19	Prdm2 (ENSMUSG00000057637) #21	6330411D24Rik (ENSMUSG00000110067)	Kazn (ENSMUSG00000040606) #22	Tmem51 (ENSMUSG00000040616) #23	Fhad1 (ENSMUSG00000051435) #24	Efhd2 (ENSMUSG00000040659) #25	Ctrc (ENSMUSG00000062478)	Cela2a (ENSMUSG00000058579)	Casp9 (ENSMUSG00000028914) #27	Dnajc16 (ENSMUSG00000040697) #28	Agmat (ENSMUSG00000040706) #29	Rsc1a1 (ENSMUSG00000040715) #31	Ddi2 (ENSMUSG00000078515) #31	Plekhm2 (ENSMUSG00000028917) #32	Slc25a34 (ENSMUSG00000040740) #33	Tmem82 (ENSMUSG00000043085) #34	Fblim1 (ENSMUSG00000006219) #35	Spen (ENSMUSG00000040761) #36
Ryukyu mouse	MODERN SPECIES	13	Aadacl4fm2 (MGP_CAROLIEiJ_G0026774)	Aadacl4fm1 (MGP_CAROLIEiJ_G0026773) #14	Aadacl3 (MGP_CAROLIEiJ_G0026772) #15	MGP_CAROLIEiJ_G0026771	Cfap107 (MGP_CAROLIEiJ_G0026770) #16	Pramel13 (MGP_CAROLIEiJ_G0026769) #17	MGP_CAROLIEiJ_G0026768 #17	MGP_CAROLIEiJ_G0026767 #17	MGP_CAROLIEiJ_G0026766 #17	Oog4 (MGP_CAROLIEiJ_G0026765) #17	Pramel12 (MGP_CAROLIEiJ_G0026764) #17	Pramel1 (MGP_CAROLIEiJ_G0026763) #17	Lrrc38 (MGP_CAROLIEiJ_G0026762) #18	Pdpn (MGP_CAROLIEiJ_G0026761) #19	Prdm2 (MGP_CAROLIEiJ_G0026760) #21	Kazn (MGP_CAROLIEiJ_G0026759) #22	Tmem51 (MGP_CAROLIEiJ_G0026758) #23	Fhad1 (MGP_CAROLIEiJ_G0026757) #24	Efhd2 (MGP_CAROLIEiJ_G0026756) #25	MGP_CAROLIEiJ_G0026755	MGP_CAROLIEiJ_G0026754 #27	Dnajc16 (MGP_CAROLIEiJ_G0026753) #28	Agmat (MGP_CAROLIEiJ_G0026752) #29	MGP_CAROLIEiJ_G0026751 #31	MGP_CAROLIEiJ_G0026750 #31	Plekhm2 (MGP_CAROLIEiJ_G0026749) #32	Slc25a34 (MGP_CAROLIEiJ_G0026748) #33	Tmem82 (MGP_CAROLIEiJ_G0026747) #34	Fblim1 (MGP_CAROLIEiJ_G0026746) #35	Spen (MGP_CAROLIEiJ_G0026745) #36	Zbtb17 (MGP_CAROLIEiJ_G0026744) #37
Shrew mouse	MODERN SPECIES	19	Pramel15 (MGP_PahariEiJ_G0029106) #17	MGP_PahariEiJ_G0029105 #17	MGP_PahariEiJ_G0029104 #17	MGP_PahariEiJ_G0029103 #17	MGP_PahariEiJ_G0029102 #17	MGP_PahariEiJ_G0029101 #17	MGP_PahariEiJ_G0029100 #17	MGP_PahariEiJ_G0029099 #17	MGP_PahariEiJ_G0029098 #17	MGP_PahariEiJ_G0029097 #17	Pramel12 (MGP_PahariEiJ_G0029096) #17	Pramel1 (MGP_PahariEiJ_G0029095) #17	Lrrc38 (MGP_PahariEiJ_G0029094) #18	Pdpn (MGP_PahariEiJ_G0029093) #19	Prdm2 (MGP_PahariEiJ_G0029092) #21	Kazn (MGP_PahariEiJ_G0029091) #22	Tmem51 (MGP_PahariEiJ_G0029090) #23	Fhad1 (MGP_PahariEiJ_G0029089) #24	Efhd2 (MGP_PahariEiJ_G0029088) #25	MGP_PahariEiJ_G0029087	Cela2a (MGP_PahariEiJ_G0029086)	Casp9 (MGP_PahariEiJ_G0029085) #27	Dnajc16 (MGP_PahariEiJ_G0029084) #28	Agmat (MGP_PahariEiJ_G0029083) #29	MGP_PahariEiJ_G0029082 #31	MGP_PahariEiJ_G0029081 #31	Plekhm2 (MGP_PahariEiJ_G0029080) #32	Slc25a34 (MGP_PahariEiJ_G0029079) #33	Tmem82 (MGP_PahariEiJ_G0029078) #34	Fblim1 (MGP_PahariEiJ_G0029077) #35	Spen (MGP_PahariEiJ_G0029076) #36
Rat	MODERN SPECIES	15	Pramef17 (ENSRNOG00000042820) #17	RGD1306186 (ENSRNOG00000037039) #17	LOC120103107 (ENSRNOG00000047341) #17	Oog1 (ENSRNOG00000027142) #17	ENSRNOG00000065869 #17	Pramef5 (ENSRNOG00000067307) #17	Oog3 (ENSRNOG00000033000) #17	Pramef8 (ENSRNOG00000027278) #17	Pramef27 (ENSRNOG00000027328) #17	Lrrc38 (ENSRNOG00000015264) #18	Pdpn (ENSRNOG00000014961) #19	ENSRNOG00000070725	LOC100359951 (ENSRNOG00000071148)	Prdm2 (ENSRNOG00000033522) #21	6330411D24Rik (ENSRNOG00000065736)	Kazn (ENSRNOG00000014322) #22	ENSRNOG00000070661	Tmem51 (ENSRNOG00000014197) #23	Fhad1 (ENSRNOG00000028064) #24	Efhd2 (ENSRNOG00000013783) #25	Ctrc (ENSRNOG00000013745) #26	Cela2a (ENSRNOG00000013628)	Casp9 (ENSRNOG00000012944) #27	Dnajc16 (ENSRNOG00000012503) #28	Agmat (ENSRNOG00000012315) #29	Ddi2 (ENSRNOG00000012274) #31	Plekhm2 (ENSRNOG00000012163) #32	Tmem82 (ENSRNOG00000011970) #34	Fblim1 (ENSRNOG00000011774) #35	Spen (ENSRNOG00000033556) #36	Zbtb17 (ENSRNOG00000010436) #37
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00940000157630.a.a.a #14	ENSGT00940000157630.a.a.b #14	ENSGT00940000157630.a.b #14	ENSGT00940000163565	ENSGT00940000157630.b.a #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630.a.a.b #14	ENSGT00940000157630.a.b #14	ENSGT00940000157630.b.b #14	ENSGT00940000157630.b.a #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.a #17	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	726										Pramel12 (ENSMAUG00000013165) #17	Pramel1 (ENSMAUG00000017344) #17	Lrrc38 (ENSMAUG00000019684) #18	Pdpn (ENSMAUG00000013176) #19	Prdm2 (ENSMAUG00000017021) #21	ENSMAUG00000009108 #22	ENSMAUG00000010094 #22	Tmem51 (ENSMAUG00000007940) #23	Fhad1 (ENSMAUG00000001064) #24	Efhd2 (ENSMAUG00000001147) #25	ENSMAUG00000007283 #26	Cela2a (ENSMAUG00000010885)	Casp9 (ENSMAUG00000014326) #27	Dnajc16 (ENSMAUG00000021653) #28	Agmat (ENSMAUG00000022247) #29	ENSMAUG00000020325 #30	Plekhm2 (ENSMAUG00000010838) #32	Slc25a34 (ENSMAUG00000020022) #33	Tmem82 (ENSMAUG00000007567) #34	Fblim1 (ENSMAUG00000018139) #35	Spen (ENSMAUG00000008318) #36	Zbtb17 (ENSMAUG00000001376) #37
Golden Hamster	MODERN SPECIES	726											Pramel12 (ENSMAUG00000013165) #17	Pramel1 (ENSMAUG00000017344) #17	Lrrc38 (ENSMAUG00000019684) #18	Pdpn (ENSMAUG00000013176) #19	Prdm2 (ENSMAUG00000017021) #21	ENSMAUG00000009108 #22	ENSMAUG00000010094 #22	Tmem51 (ENSMAUG00000007940) #23	Fhad1 (ENSMAUG00000001064) #24	Efhd2 (ENSMAUG00000001147) #25	ENSMAUG00000007283 #26	Cela2a (ENSMAUG00000010885)	Casp9 (ENSMAUG00000014326) #27	Dnajc16 (ENSMAUG00000021653) #28	Agmat (ENSMAUG00000022247) #29	ENSMAUG00000020325 #30	Plekhm2 (ENSMAUG00000010838) #32	Slc25a34 (ENSMAUG00000020022) #33	Tmem82 (ENSMAUG00000007567) #34	Fblim1 (ENSMAUG00000018139) #35	Spen (ENSMAUG00000008318) #36
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	111	Vps13d (ENSCGRG00001023868) #10	Dhrs3 (ENSCGRG00001012549) #13	Aadacl4fm4 (ENSCGRG00001018913) #14	Aadacl4 (ENSCGRG00001021022) #14	ENSCGRG00001024601 #14	Aadacl4fm1 (ENSCGRG00001024757) #14	Aadacl3 (ENSCGRG00001024964) #15	Cfap107 (ENSCGRG00001025039) #16	Pramel13 (ENSCGRG00001018269) #17	Pramel15 (ENSCGRG00001024569) #17	Pramel12 (ENSCGRG00001024998) #17	Pramel1 (ENSCGRG00001003207) #17	Lrrc38 (ENSCGRG00001015382) #18	Pdpn (ENSCGRG00001019750) #19	Prdm2 (ENSCGRG00001020470) #21	ENSCGRG00001022553 #22	Tmem51 (ENSCGRG00001023938) #23	ENSCGRG00001024256 #22	Fhad1 (ENSCGRG00001024955) #24	Efhd2 (ENSCGRG00001016692) #25	ENSCGRG00001018143 #26	ENSCGRG00001024391	Casp9 (ENSCGRG00001012293) #27	Dnajc16 (ENSCGRG00001019382) #28	Agmat (ENSCGRG00001022077) #29	ENSCGRG00001024250 #31	Plekhm2 (ENSCGRG00001011209) #32	Slc25a34 (ENSCGRG00001021299) #33	Tmem82 (ENSCGRG00001022720) #34	Fblim1 (ENSCGRG00001024160) #35	Spen (ENSCGRG00001007725) #36
Chinese hamster chok1gshd	MODERN SPECIES	111	Aadacl4fm4 (ENSCGRG00001018913) #14	Aadacl4 (ENSCGRG00001021022) #14	ENSCGRG00001024601 #14	Aadacl4fm1 (ENSCGRG00001024757) #14	Aadacl3 (ENSCGRG00001024964) #15	Cfap107 (ENSCGRG00001025039) #16	Pramel13 (ENSCGRG00001018269) #17	Pramel15 (ENSCGRG00001024569) #17	Pramel12 (ENSCGRG00001024998) #17	Pramel1 (ENSCGRG00001003207) #17	Lrrc38 (ENSCGRG00001015382) #18	Pdpn (ENSCGRG00001019750) #19	Prdm2 (ENSCGRG00001020470) #21	ENSCGRG00001022553 #22	Tmem51 (ENSCGRG00001023938) #23	ENSCGRG00001024256 #22	Fhad1 (ENSCGRG00001024955) #24	Efhd2 (ENSCGRG00001016692) #25	ENSCGRG00001018143 #26	ENSCGRG00001024391	Casp9 (ENSCGRG00001012293) #27	Dnajc16 (ENSCGRG00001019382) #28	Agmat (ENSCGRG00001022077) #29	ENSCGRG00001024250 #31	Plekhm2 (ENSCGRG00001011209) #32	Slc25a34 (ENSCGRG00001021299) #33	Tmem82 (ENSCGRG00001022720) #34	Fblim1 (ENSCGRG00001024160) #35	Spen (ENSCGRG00001007725) #36	Zbtb17 (ENSCGRG00001019408) #37	Srarp (ENSCGRG00001024454)
Cricetidae_B	ANCESTRAL SPECIES	2										ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b #17	ENSGT01030000234531.A.b.b.b.e.a.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	1	ENSMOCG00000005802	E330021D16Rik (ENSMOCG00000006042)	Usp9x (ENSMOCG00000009609)	ENSMOCG00000008046	Ddx3x (ENSMOCG00000014170)	Nyx (ENSMOCG00000018188)	Cask (ENSMOCG00000007637)	Gpr34 (ENSMOCG00000016433)	Gpr82 (ENSMOCG00000003874)	ENSMOCG00000016039	Lrrc38 (ENSMOCG00000014237) #18	ENSMOCG00000015618	ENSMOCG00000018838	ENSMOCG00000021077 #21	ENSMOCG00000002830 #22	ENSMOCG00000007192 #22	Tmem51 (ENSMOCG00000009847) #23	Fhad1 (ENSMOCG00000015308) #24	Efhd2 (ENSMOCG00000002945) #25	ENSMOCG00000006919 #26	Cela2a (ENSMOCG00000019141)	Casp9 (ENSMOCG00000020323) #27	Dnajc16 (ENSMOCG00000018345) #28	Agmat (ENSMOCG00000006579) #29	ENSMOCG00000008741 #30	Plekhm2 (ENSMOCG00000016353) #32	Slc25a34 (ENSMOCG00000001770) #33	Tmem82 (ENSMOCG00000004076) #34	Spen (ENSMOCG00000016083) #36	Zbtb17 (ENSMOCG00000005017) #37	Hspb7 (ENSMOCG00000015401)
Prairie vole	MODERN SPECIES	1	ENSMOCG00000016742	ENSMOCG00000005802	E330021D16Rik (ENSMOCG00000006042)	Usp9x (ENSMOCG00000009609)	ENSMOCG00000008046	Ddx3x (ENSMOCG00000014170)	Nyx (ENSMOCG00000018188)	Cask (ENSMOCG00000007637)	Gpr34 (ENSMOCG00000016433)	Gpr82 (ENSMOCG00000003874)	ENSMOCG00000016039	Lrrc38 (ENSMOCG00000014237) #18	ENSMOCG00000015618	ENSMOCG00000018838	ENSMOCG00000021077 #21	ENSMOCG00000002830 #22	ENSMOCG00000007192 #22	Tmem51 (ENSMOCG00000009847) #23	Fhad1 (ENSMOCG00000015308) #24	Efhd2 (ENSMOCG00000002945) #25	ENSMOCG00000006919 #26	Cela2a (ENSMOCG00000019141)	Casp9 (ENSMOCG00000020323) #27	Dnajc16 (ENSMOCG00000018345) #28	Agmat (ENSMOCG00000006579) #29	ENSMOCG00000008741 #30	Plekhm2 (ENSMOCG00000016353) #32	Slc25a34 (ENSMOCG00000001770) #33	Tmem82 (ENSMOCG00000004076) #34	Spen (ENSMOCG00000016083) #36	Zbtb17 (ENSMOCG00000005017) #37
Northern American deer mouse	MODERN SPECIES	11	Pank4 (ENSPEMG00000018726)	Hes5 (ENSPEMG00000031266)	Tnfrsf14 (ENSPEMG00000016250)	Prxl2b (ENSPEMG00000016639)	Mmel1 (ENSPEMG00000015360)	ENSPEMG00000003914	Actrt2 (ENSPEMG00000014225)	ENSPEMG00000027963	Pramel12 (ENSPEMG00000023636) #17	ENSPEMG00000025426 ##17	Pramel1 (ENSPEMG00000021753) #17	Lrrc38 (ENSPEMG00000027448) #18	Pdpn (ENSPEMG00000007524) #19	Prdm2 (ENSPEMG00000023130) #21	ENSPEMG00000028452 ##22	Kazn (ENSPEMG00000021311) #22	Tmem51 (ENSPEMG00000031341) #23	Fhad1 (ENSPEMG00000005222) #24	Efhd2 (ENSPEMG00000001500) #25	ENSPEMG00000009764	Cela2a (ENSPEMG00000023249)	Casp9 (ENSPEMG00000022246) #27	Dnajc16 (ENSPEMG00000023576) #28	Agmat (ENSPEMG00000022206) #29	ENSPEMG00000021491 #30	ENSPEMG00000029595 #31	Plekhm2 (ENSPEMG00000024198) #32	Slc25a34 (ENSPEMG00000009951) #33	Tmem82 (ENSPEMG00000021877) #34	Fblim1 (ENSPEMG00000022333) #35	Spen (ENSPEMG00000022997) #36
Lesser Egyptian jerboa	MODERN SPECIES	63	Tnfrsf1b (ENSJJAG00000010813) #9	Vps13d (ENSJJAG00000013581) #10	Dhrs3 (ENSJJAG00000010964) #13	ENSJJAG00000011214 #14	ENSJJAG00000010939 #14	ENSJJAG00000009632 #14	Aadacl4fm1 (ENSJJAG00000011655) #14	Aadacl3 (ENSJJAG00000011110) #15	Cfap107 (ENSJJAG00000012706) #16	ENSJJAG00000013886 #17	ENSJJAG00000011316 ##17	ENSJJAG00000007952 #17	Lrrc38 (ENSJJAG00000010300) #18	Pdpn (ENSJJAG00000011298) #19	Prdm2 (ENSJJAG00000013245) #21	Kazn (ENSJJAG00000013027) #22	Tmem51 (ENSJJAG00000007750) #23	Fhad1 (ENSJJAG00000011545) #24	Efhd2 (ENSJJAG00000005238) #25	ENSJJAG00000011961 #26	Cela2a (ENSJJAG00000012004)	ENSJJAG00000010832	Dnajc16 (ENSJJAG00000007639) #28	Agmat (ENSJJAG00000000771) #29	ENSJJAG00000008758 #30	ENSJJAG00000002222 #31	Plekhm2 (ENSJJAG00000009735) #32	Slc25a34 (ENSJJAG00000001837) #33	Tmem82 (ENSJJAG00000011441) #34	Fblim1 (ENSJJAG00000013123) #35	Spen (ENSJJAG00000010882) #36
Kangaroo rat	DUPLICATION
Kangaroo rat	MODERN SPECIES	380	Fam151a (ENSDORG00000013808)	Acot11 (ENSDORG00000013806)	Ssbp3 (ENSDORG00000002296)	Mrpl37 (ENSDORG00000002294)	Cyb5rl (ENSDORG00000002291)	Cdcp2 (ENSDORG00000002289)	Tceanc2 (ENSDORG00000029310)	ENSDORG00000002286	Ldlrad1 (ENSDORG00000002283)	Lrrc42 (ENSDORG00000004216)	Hspb11 (ENSDORG00000015267)	Dio1 (ENSDORG00000015264)	Yipf1 (ENSDORG00000015262)	ENSDORG00000011209 #19	Prdm2 (ENSDORG00000012558) #21	ENSDORG00000016542 #22	ENSDORG00000023515 #22	Tmem51 (ENSDORG00000015453) #23	Fhad1 (ENSDORG00000005392) #24	Efhd2 (ENSDORG00000026861) #25	ENSDORG00000016574 #26	Cela2a (ENSDORG00000006593)	ENSDORG00000003973	Dnajc16 (ENSDORG00000003972) #28	Agmat (ENSDORG00000003970) #29	ENSDORG00000012305 #30	ENSDORG00000027846 #31	Plekhm2 (ENSDORG00000008849) #32	Slc25a34 (ENSDORG00000008853) #33	Tmem82 (ENSDORG00000008854) #34	Fblim1 (ENSDORG00000002591) #35
Kangaroo rat	MODERN SPECIES	380	Acot11 (ENSDORG00000013806)	Ssbp3 (ENSDORG00000002296)	Mrpl37 (ENSDORG00000002294)	Cyb5rl (ENSDORG00000002291)	Cdcp2 (ENSDORG00000002289)	Tceanc2 (ENSDORG00000029310)	ENSDORG00000002286	Ldlrad1 (ENSDORG00000002283)	Lrrc42 (ENSDORG00000004216)	Hspb11 (ENSDORG00000015267)	Dio1 (ENSDORG00000015264)	Yipf1 (ENSDORG00000015262)	ENSDORG00000011209 #19	Prdm2 (ENSDORG00000012558) #21	ENSDORG00000016542 #22	ENSDORG00000023515 #22	Tmem51 (ENSDORG00000015453) #23	Fhad1 (ENSDORG00000005392) #24	Efhd2 (ENSDORG00000026861) #25	ENSDORG00000016574 #26	Cela2a (ENSDORG00000006593)	ENSDORG00000003973	Dnajc16 (ENSDORG00000003972) #28	Agmat (ENSDORG00000003970) #29	ENSDORG00000012305 #30	ENSDORG00000027846 #31	Plekhm2 (ENSDORG00000008849) #32	Slc25a34 (ENSDORG00000008853) #33	Tmem82 (ENSDORG00000008854) #34	Fblim1 (ENSDORG00000002591) #35	Spen (ENSDORG00000023909) #36
Rodentia_A	ANCESTRAL SPECIES		ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.e.b #17	ENSGT01030000234531.A.b.b.b.f #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Sciuridae	ANCESTRAL SPECIES	3	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.f.b.b #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Marmotini	ANCESTRAL SPECIES		ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630.c #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Marmotini_b	ANCESTRAL SPECIES		ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630.c #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Squirrel	DUPLICATION
Squirrel	MODERN SPECIES	74	NPPB (ENSSTOG00000020778)	KIAA2013 (ENSSTOG00000027586)	PLOD1 (ENSSTOG00000009927)	MFN2 (ENSSTOG00000005705)	MIIP (ENSSTOG00000024734) #7	TNFRSF1B (ENSSTOG00000024605) #9	VPS13D (ENSSTOG00000005519) #10	DHRS3 (ENSSTOG00000016015) #13	AADACL4 (ENSSTOG00000019534) #14	AADACL3 (ENSSTOG00000007059) #15	CFAP107 (ENSSTOG00000009816) #16	LRRC38 (ENSSTOG00000023111) #18	PDPN (ENSSTOG00000032629) #19	PRDM2 (ENSSTOG00000019848) #21	ENSSTOG00000023112 #22	ENSSTOG00000030433 #22	TMEM51 (ENSSTOG00000020167) #23	FHAD1 (ENSSTOG00000023646) #24	EFHD2 (ENSSTOG00000025403) #25	ENSSTOG00000032931 #26	ENSSTOG00000021532	ENSSTOG00000028042	DNAJC16 (ENSSTOG00000013804) #28	AGMAT (ENSSTOG00000013813) #29	DDI2 (ENSSTOG00000019447) #30	RSC1A1 (ENSSTOG00000025982) #31	PLEKHM2 (ENSSTOG00000013821) #32	SLC25A34 (ENSSTOG00000013833) #33	TMEM82 (ENSSTOG00000025954) #34	FBLIM1 (ENSSTOG00000028645) #35	ENSSTOG00000029207
Squirrel	MODERN SPECIES	74	ENSSTOG00000007663	NPPB (ENSSTOG00000020778)	KIAA2013 (ENSSTOG00000027586)	PLOD1 (ENSSTOG00000009927)	MFN2 (ENSSTOG00000005705)	MIIP (ENSSTOG00000024734) #7	TNFRSF1B (ENSSTOG00000024605) #9	VPS13D (ENSSTOG00000005519) #10	DHRS3 (ENSSTOG00000016015) #13	AADACL4 (ENSSTOG00000019534) #14	AADACL3 (ENSSTOG00000007059) #15	CFAP107 (ENSSTOG00000009816) #16	LRRC38 (ENSSTOG00000023111) #18	PDPN (ENSSTOG00000032629) #19	PRDM2 (ENSSTOG00000019848) #21	ENSSTOG00000023112 #22	ENSSTOG00000030433 #22	TMEM51 (ENSSTOG00000020167) #23	FHAD1 (ENSSTOG00000023646) #24	EFHD2 (ENSSTOG00000025403) #25	ENSSTOG00000032931 #26	ENSSTOG00000021532	ENSSTOG00000028042	DNAJC16 (ENSSTOG00000013804) #28	AGMAT (ENSSTOG00000013813) #29	DDI2 (ENSSTOG00000019447) #30	RSC1A1 (ENSSTOG00000025982) #31	PLEKHM2 (ENSSTOG00000013821) #32	SLC25A34 (ENSSTOG00000013833) #33	TMEM82 (ENSSTOG00000025954) #34	FBLIM1 (ENSSTOG00000028645) #35
Arctic ground squirrel	MODERN SPECIES	451												LRRC38 (ENSUPAG00010007763) #18	PDPN (ENSUPAG00010007766) #19	PRDM2 (ENSUPAG00010007769) #21	ENSUPAG00010007797 ##22	KAZN (ENSUPAG00010007804) #22	TMEM51 (ENSUPAG00010007834) #23	FHAD1 (ENSUPAG00010007841) #24	EFHD2 (ENSUPAG00010007892) #25
Alpin marmot	MODERN SPECIES	15													LRRC38 (ENSMMMG00000021887) #18	ENSMMMG00000021882 #19	PRDM2 (ENSMMMG00000021858) #21	KAZN (ENSMMMG00000021835) #22	TMEM51 (ENSMMMG00000021802) #23	FHAD1 (ENSMMMG00000021774) #24	EFHD2 (ENSMMMG00000021754) #25	ENSMMMG00000021744	CASP9 (ENSMMMG00000021730) #27	DNAJC16 (ENSMMMG00000021719) #28	AGMAT (ENSMMMG00000021713) #29	DDI2 (ENSMMMG00000021707) #30	PLEKHM2 (ENSMMMG00000021689) #32	SLC25A34 (ENSMMMG00000021668) #33	TMEM82 (ENSMMMG00000021661) #34	FBLIM1 (ENSMMMG00000021649) #35	ENSMMMG00000021647	ZBTB17 (ENSMMMG00000021636) #37	SRARP (ENSMMMG00000021634)
Eurasian red squirrel	MODERN SPECIES		MFN2 (ENSSVLG00005006764)	MIIP (ENSSVLG00005006797) #7	TNFRSF8 (ENSSVLG00005006831) #8	ENSSVLG00005006934	TNFRSF1B (ENSSVLG00005006983) #9	VPS13D (ENSSVLG00005007158) #10	DHRS3 (ENSSVLG00005007738) #13	ENSSVLG00005007795 #14	ENSSVLG00005007846 #14	AADACL3 (ENSSVLG00005007922) #15	CFAP107 (ENSSVLG00005007956) #16	ENSSVLG00005008079 #17	LRRC38 (ENSSVLG00005008488) #18	PDPN (ENSSVLG00005008527) #19	PRDM2 (ENSSVLG00005008674) #21	KAZN (ENSSVLG00005008929) #22	TMEM51 (ENSSVLG00005009207) #23	FHAD1 (ENSSVLG00005009255) #24	EFHD2 (ENSSVLG00005009504) #25	CTRC (ENSSVLG00005009531) #26	ENSSVLG00005009617	ENSSVLG00005009810	ENSSVLG00005009886	DNAJC16 (ENSSVLG00005009925) #28	ENSSVLG00005009978	AGMAT (ENSSVLG00005010003) #29	DDI2 (ENSSVLG00005010074) #30	RSC1A1 (ENSSVLG00005010092) #31	PLEKHM2 (ENSSVLG00005010150) #32	SLC25A34 (ENSSVLG00005010194) #33	TMEM82 (ENSSVLG00005010237) #34
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630.h #14	ENSGT00940000157630.g.a #14	ENSGT00940000157630.g.b #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.e.b.c #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000170582	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000007958	TCEANC2 (ENSHGLG00000046573)	ENSHGLG00000043225	LRRC42 (ENSHGLG00000000742)	ENSHGLG00000001352	ENSHGLG00000040583	ENSHGLG00000042903	ENSHGLG00000046232	NDC1 (ENSHGLG00000001547)	ENSHGLG00000041952	LRP8 (ENSHGLG00000001818)	ENSHGLG00000001648	ENSHGLG00000002034	CPT2 (ENSHGLG00000003070)	ENSHGLG00000035804	ENSHGLG00000009940 #22	TMEM51 (ENSHGLG00000013366) #23	FHAD1 (ENSHGLG00000018196) #24	EFHD2 (ENSHGLG00000046486) #25	CTRC (ENSHGLG00000018486) #26	ENSHGLG00000016895	CASP9 (ENSHGLG00000019310) #27	DNAJC16 (ENSHGLG00000014574) #28	AGMAT (ENSHGLG00000007473) #29	ENSHGLG00000038027 #31	PLEKHM2 (ENSHGLG00000007190) #32	SLC25A34 (ENSHGLG00000032560) #33	TMEM82 (ENSHGLG00000011424) #34	FBLIM1 (ENSHGLG00000019134) #35	ENSHGLG00000014407	SPEN (ENSHGLG00000032487) #36
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630.h #14	ENSGT00940000157630.g.a #14	ENSGT00940000157630.g.b #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT00940000162571 #18	ENSGT00940000170582	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Hystricomorpha_b	ANCESTRAL SPECIES	7													ENSGT00940000162571 #18	ENSGT00940000170582	ENSGT00940000159410 #21	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a	ENSGT00940000159698 #27	ENSGT00940000155851 #28	ENSGT00950000183195.a #29	ENSGT00950000182999.a.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b #36
Long-tailed chinchilla	DUPLICATION
Long-tailed chinchilla	MODERN SPECIES	234													LRRC38 (ENSCLAG00000002559) #18	ENSCLAG00000002299	PRDM2 (ENSCLAG00000004362) #21	ENSCLAG00000003967 #22	ENSCLAG00000003684 #22	TMEM51 (ENSCLAG00000003533) #23	FHAD1 (ENSCLAG00000012202) #24	EFHD2 (ENSCLAG00000014606) #25	CTRC (ENSCLAG00000010834) #26	ENSCLAG00000010512	CASP9 (ENSCLAG00000003082) #27	DNAJC16 (ENSCLAG00000002114) #28	AGMAT (ENSCLAG00000004055) #29	ENSCLAG00000003693 #31	PLEKHM2 (ENSCLAG00000003128) #32	SLC25A34 (ENSCLAG00000002647) #33	TMEM82 (ENSCLAG00000004347) #34	FBLIM1 (ENSCLAG00000003668) #35	SPEN (ENSCLAG00000002018) #36
Long-tailed chinchilla	MODERN SPECIES	234												LRRC38 (ENSCLAG00000002559) #18	ENSCLAG00000002299	PRDM2 (ENSCLAG00000004362) #21	ENSCLAG00000003967 #22	ENSCLAG00000003684 #22	TMEM51 (ENSCLAG00000003533) #23	FHAD1 (ENSCLAG00000012202) #24	EFHD2 (ENSCLAG00000014606) #25	CTRC (ENSCLAG00000010834) #26	ENSCLAG00000010512	CASP9 (ENSCLAG00000003082) #27	DNAJC16 (ENSCLAG00000002114) #28	AGMAT (ENSCLAG00000004055) #29	ENSCLAG00000003693 #31	PLEKHM2 (ENSCLAG00000003128) #32	SLC25A34 (ENSCLAG00000002647) #33	TMEM82 (ENSCLAG00000004347) #34	FBLIM1 (ENSCLAG00000003668) #35	SPEN (ENSCLAG00000002018) #36	ZBTB17 (ENSCLAG00000006044) #37
Degu	DUPLICATION
Degu	MODERN SPECIES	133															PRDM2 (ENSODEG00000017400) #21	ENSODEG00000016425 #22	ENSODEG00000016473 #22	TMEM51 (ENSODEG00000016454) #23	FHAD1 (ENSODEG00000016605) #24	EFHD2 (ENSODEG00000016306) #25	CTRC (ENSODEG00000016340) #26	ENSODEG00000020480	ENSODEG00000016581	ENSODEG00000016480	DNAJC16 (ENSODEG00000016313) #28	AGMAT (ENSODEG00000016792) #29	DDI2 (ENSODEG00000016549) #30	RSC1A1 (ENSODEG00000016320) #31	PLEKHM2 (ENSODEG00000016981) #32	SLC25A34 (ENSODEG00000016800) #33	TMEM82 (ENSODEG00000016458) #34
Degu	MODERN SPECIES	133														PRDM2 (ENSODEG00000017400) #21	ENSODEG00000016425 #22	ENSODEG00000016473 #22	TMEM51 (ENSODEG00000016454) #23	FHAD1 (ENSODEG00000016605) #24	EFHD2 (ENSODEG00000016306) #25	CTRC (ENSODEG00000016340) #26	ENSODEG00000020480	ENSODEG00000016581	ENSODEG00000016480	DNAJC16 (ENSODEG00000016313) #28	AGMAT (ENSODEG00000016792) #29	DDI2 (ENSODEG00000016549) #30	RSC1A1 (ENSODEG00000016320) #31	PLEKHM2 (ENSODEG00000016981) #32	SLC25A34 (ENSODEG00000016800) #33	TMEM82 (ENSODEG00000016458) #34	FBLIM1 (ENSODEG00000016558) #35
Guinea pig	DUPLICATION
Guinea pig	MODERN SPECIES	25	PLOD1 (ENSCPOG00000020909)	MFN2 (ENSCPOG00000006834)	MIIP (ENSCPOG00000032652) #7	ENSCPOG00000009191 #8	TNFRSF1B (ENSCPOG00000020299) #9	VPS13D (ENSCPOG00000010440) #10	DHRS3 (ENSCPOG00000001600) #13	ENSCPOG00000010237 #14	ENSCPOG00000015038 #14	ENSCPOG00000011374 #14	AADACL3 (ENSCPOG00000000228) #15	CFAP107 (ENSCPOG00000003643) #16	LRRC38 (ENSCPOG00000031681) #18	ENSCPOG00000038973	PRDM2 (ENSCPOG00000038436) #21	ENSCPOG00000007591 #22	ENSCPOG00000035462 #22	TMEM51 (ENSCPOG00000035704) #23	FHAD1 (ENSCPOG00000014449) #24	EFHD2 (ENSCPOG00000022076) #25	CTRC (ENSCPOG00000034507) #26	ENSCPOG00000039418	ENSCPOG00000038747	CASP9 (ENSCPOG00000012051) #27	DNAJC16 (ENSCPOG00000012059) #28	AGMAT (ENSCPOG00000026931) #29	DDI2 (ENSCPOG00000020885) #30	RSC1A1 (ENSCPOG00000012066) #31	PLEKHM2 (ENSCPOG00000012069) #32	SLC25A34 (ENSCPOG00000012078) #33	TMEM82 (ENSCPOG00000012084) #34
Guinea pig	MODERN SPECIES	25	MFN2 (ENSCPOG00000006834)	MIIP (ENSCPOG00000032652) #7	ENSCPOG00000009191 #8	TNFRSF1B (ENSCPOG00000020299) #9	VPS13D (ENSCPOG00000010440) #10	DHRS3 (ENSCPOG00000001600) #13	ENSCPOG00000010237 #14	ENSCPOG00000015038 #14	ENSCPOG00000011374 #14	AADACL3 (ENSCPOG00000000228) #15	CFAP107 (ENSCPOG00000003643) #16	LRRC38 (ENSCPOG00000031681) #18	ENSCPOG00000038973	PRDM2 (ENSCPOG00000038436) #21	ENSCPOG00000007591 #22	ENSCPOG00000035462 #22	TMEM51 (ENSCPOG00000035704) #23	FHAD1 (ENSCPOG00000014449) #24	EFHD2 (ENSCPOG00000022076) #25	CTRC (ENSCPOG00000034507) #26	ENSCPOG00000039418	ENSCPOG00000038747	CASP9 (ENSCPOG00000012051) #27	DNAJC16 (ENSCPOG00000012059) #28	AGMAT (ENSCPOG00000026931) #29	DDI2 (ENSCPOG00000020885) #30	RSC1A1 (ENSCPOG00000012066) #31	PLEKHM2 (ENSCPOG00000012069) #32	SLC25A34 (ENSCPOG00000012078) #33	TMEM82 (ENSCPOG00000012084) #34	FBLIM1 (ENSCPOG00000024867) #35
Lagomorpha	ANCESTRAL SPECIES	140	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768 #7	ENSGT00510000049215 #8	ENSGT00940000161800 #9	ENSGT00950000183083.b #10	ENSGT00940000158724 #13	ENSGT00940000157630 #14	ENSGT00940000162160 #15	ENSGT00390000014553 #16	ENSGT01030000234531.A.b.b.b.c #17	ENSGT00940000162571 #18	ENSGT00390000000013 #19	ENSGT00940000159410 #21	ENSGT00390000002770	ENSGT00940000154570.b #22
Pika	MODERN SPECIES	4282																KAZN (ENSOPRG00000008867) #22	ENSOPRG00000008955
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	472	TNFRSF8 (ENSOCUG00000015925) #8	TNFRSF1B (ENSOCUG00000014127) #9	VPS13D (ENSOCUG00000005551) #10	ENSOCUG00000029199 #13	ENSOCUG00000003422 #14	ENSOCUG00000026490 #14	AADACL3 (ENSOCUG00000025025) #15	CFAP107 (ENSOCUG00000007517) #16	ENSOCUG00000008348 #17	LRRC38 (ENSOCUG00000010759) #18	PDPN (ENSOCUG00000005899) #19	ENSOCUG00000030212	PRDM2 (ENSOCUG00000009605) #21	ENSOCUG00000028991	ENSOCUG00000017106 #22	ENSOCUG00000033717 #22
Rabbit	MODERN SPECIES	472	ENSOCUG00000003525 #7	TNFRSF8 (ENSOCUG00000015925) #8	TNFRSF1B (ENSOCUG00000014127) #9	VPS13D (ENSOCUG00000005551) #10	ENSOCUG00000029199 #13	ENSOCUG00000003422 #14	ENSOCUG00000026490 #14	AADACL3 (ENSOCUG00000025025) #15	CFAP107 (ENSOCUG00000007517) #16	ENSOCUG00000008348 #17	LRRC38 (ENSOCUG00000010759) #18	PDPN (ENSOCUG00000005899) #19	ENSOCUG00000030212	PRDM2 (ENSOCUG00000009605) #21	ENSOCUG00000028991	ENSOCUG00000017106 #22	ENSOCUG00000033717 #22