Laurasiatheria	ANCESTRAL SPECIES		ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00910000148116	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00910000148116	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Artiodactyla	ANCESTRAL SPECIES		ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b #13	ENSGT01030000234531.A.b.b.b.i.a.a.a.b #10	ENSGT01030000234531.A.b.b.b.i.a.a.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Suina	ANCESTRAL SPECIES	10	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b.b ##15	ENSGT01030000234531.A.b.b.b.i.a.a.a.b #10	ENSGT01030000234531.A.b.b.b.i.a.a.b.c.b #12	ENSGT01030000234531.A.b.b.b.i.a.b.a #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.c.a.b #14	ENSGT01030000234531.A.b.b.b.i.a.a.b.c.a.a #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Pig	MODERN SPECIES	14	ENSSSCG00000033129 #7	ENSSSCG00000059568 #8	ENSSSCG00000055083 #9	ENSSSCG00000031836 #10	ENSSSCG00000044717 #11	ENSSSCG00000063473 #12	ENSSSCG00000059389 #13	ENSSSCG00000040680 #14	ENSSSCG00000037632 #15	LRRC38 (ENSSSCG00000003449) #16	ENSSSCG00000003448 #17	PDPN (ENSSSCG00000003451) #18	PRDM2 (ENSSSCG00000020710) #19	ENSSSCG00000054874 #20	ENSSSCG00000043303 #21	KAZN (ENSSSCG00000037676) #22	TMEM51 (ENSSSCG00000021026) #23	FHAD1 (ENSSSCG00000003455) #24	EFHD2 (ENSSSCG00000003458) #25	CTRC (ENSSSCG00000054068) #26	CELA2A (ENSSSCG00000003459) #27	CASP9 (ENSSSCG00000003460) #28	DNAJC16 (ENSSSCG00000003464) #29	AGMAT (ENSSSCG00000003463) #30	RSC1A1 (ENSSSCG00000003461) #31	PLEKHM2 (ENSSSCG00000003468) #32	SLC25A34 (ENSSSCG00000032950) #33	TMEM82 (ENSSSCG00000003466) #34	FBLIM1 (ENSSSCG00000003465) #35	ZBTB17 (ENSSSCG00000026103) #36	ENSSSCG00000059667 #37
Chacoan peccary	MODERN SPECIES	808	AADACL4 (ENSCWAG00000007106)	AADACL3 (ENSCWAG00000007133)	CFAP107 (ENSCWAG00000007157)	ENSCWAG00000007230 ##15	ENSCWAG00000007389 #10	ENSCWAG00000007596 ##15	ENSCWAG00000007632 #12	ENSCWAG00000007895 #13	ENSCWAG00000007976 #14	ENSCWAG00000008260 #15	ENSCWAG00000009563 ##15	LRRC38 (ENSCWAG00000009598) #16	PDPN (ENSCWAG00000009625) #18	PRDM2 (ENSCWAG00000009695) #19	ENSCWAG00000010143	KAZN (ENSCWAG00000010184) #22	TMEM51 (ENSCWAG00000010594) #23	FHAD1 (ENSCWAG00000010624) #24	EFHD2 (ENSCWAG00000010688) #25	CTRC (ENSCWAG00000010723) #26	ENSCWAG00000010788 #27	CASP9 (ENSCWAG00000010871) #28	DNAJC16 (ENSCWAG00000010911) #29	AGMAT (ENSCWAG00000011107) #30	DDI2 (ENSCWAG00000011183)	RSC1A1 (ENSCWAG00000011233) #31	PLEKHM2 (ENSCWAG00000011249) #32	SLC25A34 (ENSCWAG00000011336) #33	TMEM82 (ENSCWAG00000011399) #34	FBLIM1 (ENSCWAG00000011464) #35	SPEN (ENSCWAG00000011530)
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b #13	ENSGT01030000234531.A.b.b.b.i.a.a.a.b #10	ENSGT01030000234531.A.b.b.b.i.a.a.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b.d #13	ENSGT01030000234531.A.b.b.b.i.b #7	ENSGT01030000234531.A.b.b.b.i.a.b.c #13	ENSGT01030000234531.A.b.b.b.i.a.a.a.b #10	ENSGT01030000234531.A.b.b.b.i.a.a.b.a #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Pecora	ANCESTRAL SPECIES	22					ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a #10	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b #15	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.j ##15	ENSGT01030000234531.A.b.b.b.i.a.b.d #13	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Percora_a	ANCESTRAL SPECIES	15	ENSGT00550000074794.k.b	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.j ##15	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a #10	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b #15	ENSGT01030000234531.A.b.b.b.i.a.b.d #13	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Bovidae	ANCESTRAL SPECIES	15	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.b #13	ENSGT01030000234531.A.b.b.b.i.a.b.c.b #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a #15	ENSGT01030000234531.A.b.b.b.i.a.b.d #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a #10	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Bovinae	ANCESTRAL SPECIES	12	ENSGT01030000234531.A.b.b.b.i.a.b.c.b #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a #15	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a #13	ENSGT01030000234531.A.b.b.b.i.a.b.d #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a #10	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Bos	ANCESTRAL SPECIES	12	ENSGT01030000234531.A.b.b.b.i.a.b.c.b #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a #15	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a #13	ENSGT01030000234531.A.b.b.b.i.a.b.d.d #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a #10	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003.d #35	ENSGT00940000154141.B.t.b	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.b
Bos_a	ANCESTRAL SPECIES	8	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.b #10	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.b #13	ENSGT01030000234531.A.b.b.b.i.a.b.c.b #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a #13	ENSGT01030000234531.A.b.b.b.i.a.b.d.d #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a #10	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00390000002770 #20	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003.d #35	ENSGT00940000154141.B.t.b	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.b
Wild yak	MODERN SPECIES	185														ENSBMUG00000025697 #19	ENSBMUG00000025687 #20	KAZN (ENSBMUG00000025682) #22	TMEM51 (ENSBMUG00000025671) #23	FHAD1 (ENSBMUG00000025658) #24	EFHD2 (ENSBMUG00000025629) #25	CTRC (ENSBMUG00000025619) #26	ENSBMUG00000025605 #27	CASP9 (ENSBMUG00000025595) #28	DNAJC16 (ENSBMUG00000025587) #29	AGMAT (ENSBMUG00000025575) #30	ENSBMUG00000025563 #31	PLEKHM2 (ENSBMUG00000025554) #32	SLC25A34 (ENSBMUG00000025524) #33	TMEM82 (ENSBMUG00000025518) #34	FBLIM1 (ENSBMUG00000025515) #35	SPEN (ENSBMUG00000025507)	ZBTB17 (ENSBMUG00000025489) #36
Domestic yak	MODERN SPECIES	5	ENSBGRG00000021633	ENSBGRG00000021586 #13	ENSBGRG00000021556 #15	ENSBGRG00000021508 #13	ENSBGRG00000021485 #13	ENSBGRG00000021466 #13	ENSBGRG00000021449 #13	ENSBGRG00000021430 #15	ENSBGRG00000021379 #10	ENSBGRG00000021323 #15	ENSBGRG00000021291 #15	LRRC38 (ENSBGRG00000021255) #16	ENSBGRG00000021152 #18	PRDM2 (ENSBGRG00000020945) #19	ENSBGRG00000020912	KAZN (ENSBGRG00000020603) #22	TMEM51 (ENSBGRG00000020549) #23	FHAD1 (ENSBGRG00000020058) #24	EFHD2 (ENSBGRG00000020005) #25	CTRC (ENSBGRG00000019947) #26	ENSBGRG00000019856 #27	CASP9 (ENSBGRG00000019581) #28	DNAJC16 (ENSBGRG00000019367) #29	AGMAT (ENSBGRG00000019283) #30	ENSBGRG00000019177 #31	PLEKHM2 (ENSBGRG00000019013) #32	SLC25A34 (ENSBGRG00000018908) #33	TMEM82 (ENSBGRG00000018870) #34	ENSBGRG00000018722 #35	ENSBGRG00000018679	ENSBGRG00000018650
Bos_b	ANCESTRAL SPECIES	27	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.b #13	ENSGT01030000234531.A.b.b.b.i.a.b.c.b #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a #15	ENSGT01030000234531.A.b.b.b.i.a.b.d.d #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a #10	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003.d #35	ENSGT00940000154141.B.t.b	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.b	ENSGT00940000157087.a.b
Cow	DUPLICATION
Cow	MODERN SPECIES	7	ENSBTAG00000050338 #13	ENSBTAG00000051639 #13	ENSBTAG00000054788 #13	ENSBTAG00000031507 #13	ENSBTAG00000053200 #13	ENSBTAG00000054475 #15	ENSBTAG00000046630 #10	ENSBTAG00000051014 #13	ENSBTAG00000054147 #15	ENSBTAG00000050422 #15	ENSBTAG00000024791 #15	LRRC38 (ENSBTAG00000017883) #16	PDPN (ENSBTAG00000001788) #18	PRDM2 (ENSBTAG00000020552) #19	ENSBTAG00000050764 ##22	ENSBTAG00000054228 #22	KAZN (ENSBTAG00000015606) #22	TMEM51 (ENSBTAG00000005300) #23	FHAD1 (ENSBTAG00000002408) #24	EFHD2 (ENSBTAG00000009048) #25	CTRC (ENSBTAG00000024497) #27	CELA2A (ENSBTAG00000024496) #27	CASP9 (ENSBTAG00000002472) #28	DNAJC16 (ENSBTAG00000002476) #29	AGMAT (ENSBTAG00000002478) #30	ENSBTAG00000039662 #31	PLEKHM2 (ENSBTAG00000018722) #32	SLC25A34 (ENSBTAG00000018723) #33	TMEM82 (ENSBTAG00000018724) #34	FBLIM1 (ENSBTAG00000018725) #35	SPEN (ENSBTAG00000018729)
Cow	MODERN SPECIES	7	ENSBTAG00000051639 #13	ENSBTAG00000054788 #13	ENSBTAG00000031507 #13	ENSBTAG00000053200 #13	ENSBTAG00000054475 #15	ENSBTAG00000046630 #10	ENSBTAG00000051014 #13	ENSBTAG00000054147 #15	ENSBTAG00000050422 #15	ENSBTAG00000024791 #15	LRRC38 (ENSBTAG00000017883) #16	PDPN (ENSBTAG00000001788) #18	PRDM2 (ENSBTAG00000020552) #19	ENSBTAG00000050764 ##22	ENSBTAG00000054228 #22	KAZN (ENSBTAG00000015606) #22	TMEM51 (ENSBTAG00000005300) #23	FHAD1 (ENSBTAG00000002408) #24	EFHD2 (ENSBTAG00000009048) #25	CTRC (ENSBTAG00000024497) #27	CELA2A (ENSBTAG00000024496) #27	CASP9 (ENSBTAG00000002472) #28	DNAJC16 (ENSBTAG00000002476) #29	AGMAT (ENSBTAG00000002478) #30	ENSBTAG00000039662 #31	PLEKHM2 (ENSBTAG00000018722) #32	SLC25A34 (ENSBTAG00000018723) #33	TMEM82 (ENSBTAG00000018724) #34	FBLIM1 (ENSBTAG00000018725) #35	SPEN (ENSBTAG00000018729)	ZBTB17 (ENSBTAG00000018730) #36
Hybrid Bos Indicus	MODERN SPECIES	7	ENSBIXG00005008982 #10	ENSBIXG00005009342 #15	ENSBIXG00005007254 #13	ENSBIXG00005009912 #15	ENSBIXG00005006987 #15	ENSBIXG00005010103 #13	ENSBIXG00005000864 #15	ENSBIXG00005000883 #10	ENSBIXG00005010457 #15	ENSBIXG00005010530 #15	ENSBIXG00005006420 #15	LRRC38 (ENSBIXG00005000595) #16	ENSBIXG00005000979 #18	PRDM2 (ENSBIXG00005007097) #19	ENSBIXG00005005375	KAZN (ENSBIXG00005011261) #22	TMEM51 (ENSBIXG00005011327) #23	FHAD1 (ENSBIXG00005011647) #24	EFHD2 (ENSBIXG00005011720) #25	ENSBIXG00005011756 #27	ENSBIXG00005005955 #27	CASP9 (ENSBIXG00005005479) #28	DNAJC16 (ENSBIXG00005001178) #29	AGMAT (ENSBIXG00005000434) #30	ENSBIXG00005011928 #31	PLEKHM2 (ENSBIXG00005012000) #32	SLC25A34 (ENSBIXG00005012016) #33	TMEM82 (ENSBIXG00005012046) #34	FBLIM1 (ENSBIXG00005012085) #35	ENSBIXG00005012103	ENSBIXG00005012123
American bison	MODERN SPECIES	3204	ENSBBBG00000001187 #10	ENSBBBG00000000878 #15	ENSBBBG00000003594 #13	ENSBBBG00000006952 #13	ENSBBBG00000003702 #15	ENSBBBG00000003719 #13	ENSBBBG00000015055 #13	ENSBBBG00000015074 #15	ENSBBBG00000015138 #10	ENSBBBG00000015151 #15	ENSBBBG00000003551 #15	ENSBBBG00000015198 #15	LRRC38 (ENSBBBG00000015206) #16	ENSBBBG00000015215 #18	PRDM2 (ENSBBBG00000015229) #19	KAZN (ENSBBBG00000015286) #22	TMEM51 (ENSBBBG00000015300) #23	FHAD1 (ENSBBBG00000001305) #24	EFHD2 (ENSBBBG00000001289) #25	ENSBBBG00000001259 #27	ENSBBBG00000003506 #27	CASP9 (ENSBBBG00000003489) #28	DNAJC16 (ENSBBBG00000015369) #29	AGMAT (ENSBBBG00000015382) #30	DDI2 (ENSBBBG00000003839)	RSC1A1 (ENSBBBG00000015392) #31	PLEKHM2 (ENSBBBG00000003857) #32	SLC25A34 (ENSBBBG00000015510) #33	TMEM82 (ENSBBBG00000007137) #34	FBLIM1 (ENSBBBG00000015556) #35	ENSBBBG00000015562
Caprinae	ANCESTRAL SPECIES	12	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.b #10	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.b.d #13	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.b #13	ENSGT01030000234531.A.b.b.b.i.a.b.c.b.a #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.a #15	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a.h #13	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Rambouillet Sheep	MODERN SPECIES	3	ENSOARG00020010409 #13	ENSOARG00020010369 #13	ENSOARG00020010311 #10	ENSOARG00020010268 #13	ENSOARG00020009699 #13	ENSOARG00020009442 #13	ENSOARG00020009412 #13	ENSOARG00020009341 #13	ENSOARG00020009285 #15	ENSOARG00020009198 #15	ENSOARG00020020120 #15	LRRC38 (ENSOARG00020020097) #16	PDPN (ENSOARG00020020058) #18	PRDM2 (ENSOARG00020019392) #19	ENSOARG00020019315	KAZN (ENSOARG00020018607) #22	TMEM51 (ENSOARG00020018527) #23	FHAD1 (ENSOARG00020018014) #24	EFHD2 (ENSOARG00020017962) #25	CTRC (ENSOARG00020017905) #26	ENSOARG00020017822 #27	CASP9 (ENSOARG00020017778) #28	DNAJC16 (ENSOARG00020017433) #29	AGMAT (ENSOARG00020017341) #30	PLEKHM2 (ENSOARG00020016680) #32	SLC25A34 (ENSOARG00020016601) #33	TMEM82 (ENSOARG00020016514) #34	FBLIM1 (ENSOARG00020016382) #35	SPEN (ENSOARG00020016226)	ZBTB17 (ENSOARG00020015851) #36	SAMD11 (ENSOARG00020015279)
Goat	MODERN SPECIES	7	ENSCHIG00000016311	AADACL3 (ENSCHIG00000019769)	CFAP107 (ENSCHIG00000011019)	ENSCHIG00000020333 #10	ENSCHIG00000014888 #13	ENSCHIG00000008224 #13	ENSCHIG00000020507 #15	ENSCHIG00000014501 #13	ENSCHIG00000004814 #13	ENSCHIG00000014605 #15	LRRC38 (ENSCHIG00000025277) #16	PDPN (ENSCHIG00000018527) #18	PRDM2 (ENSCHIG00000023399) #19	ENSCHIG00000010486 ##22	ENSCHIG00000006445	KAZN (ENSCHIG00000017691) #22	TMEM51 (ENSCHIG00000026268) #23	FHAD1 (ENSCHIG00000025559) #24	EFHD2 (ENSCHIG00000014798) #25	ENSCHIG00000024451 #27	ENSCHIG00000024541 #27	CASP9 (ENSCHIG00000011738) #28	DNAJC16 (ENSCHIG00000015911) #29	AGMAT (ENSCHIG00000026472) #30	DDI2 (ENSCHIG00000018822)	RSC1A1 (ENSCHIG00000007845) #31	PLEKHM2 (ENSCHIG00000024452) #32	SLC25A34 (ENSCHIG00000019912) #33	TMEM82 (ENSCHIG00000003584) #34	FBLIM1 (ENSCHIG00000017802) #35	ENSCHIG00000026022
Siberian musk deer	MODERN SPECIES	389	ENSMMSG00000022549 #15	ENSMMSG00000022796 #13	ENSMMSG00000022826 #13	ENSMMSG00000004665 #13	ENSMMSG00000005072 ##15	ENSMMSG00000005284 #13	ENSMMSG00000005419 #15	ENSMMSG00000005559 #13	ENSMMSG00000005659 #10	ENSMMSG00000005756 #15	ENSMMSG00000005826 #15	ENSMMSG00000006132 #15	LRRC38 (ENSMMSG00000006158) #16	PDPN (ENSMMSG00000006182) #18	PRDM2 (ENSMMSG00000006211) #19	KAZN (ENSMMSG00000006323) #22	TMEM51 (ENSMMSG00000006826) #23	FHAD1 (ENSMMSG00000006911) #24	EFHD2 (ENSMMSG00000007253) #25	ENSMMSG00000007296 #27	ENSMMSG00000007363 #27	CASP9 (ENSMMSG00000007413) #28	DNAJC16 (ENSMMSG00000007464) #29	AGMAT (ENSMMSG00000007536) #30	ENSMMSG00000007570	RSC1A1 (ENSMMSG00000007605) #31	PLEKHM2 (ENSMMSG00000007626) #32	SLC25A34 (ENSMMSG00000007677) #33	TMEM82 (ENSMMSG00000007707) #34	FBLIM1 (ENSMMSG00000007749) #35	SPEN (ENSMMSG00000007827)
Yarkand deer	MODERN SPECIES	5	ENSCHYG00000025611 ##15	ENSCHYG00000025592	ENSCHYG00000025542 #15	ENSCHYG00000025520 #15	ENSCHYG00000025494 #13	ENSCHYG00000025470 #13	ENSCHYG00000025459	ENSCHYG00000025443	ENSCHYG00000025290 #13	ENSCHYG00000025053 #15	ENSCHYG00000024944 #10	ENSCHYG00000024866 #15	LRRC38 (ENSCHYG00000024848) #16	PDPN (ENSCHYG00000024833) #18	PRDM2 (ENSCHYG00000024667) #19	KAZN (ENSCHYG00000024327) #22	TMEM51 (ENSCHYG00000024288) #23	FHAD1 (ENSCHYG00000024072) #24	ENSCHYG00000023937 #27	ENSCHYG00000023761 #27	CASP9 (ENSCHYG00000023723) #28	DNAJC16 (ENSCHYG00000023597) #29	AGMAT (ENSCHYG00000023518) #30	ENSCHYG00000023341 #31	PLEKHM2 (ENSCHYG00000023065) #32	ENSCHYG00000022975 #33	TMEM82 (ENSCHYG00000022909) #34	FBLIM1 (ENSCHYG00000022827) #35	SPEN (ENSCHYG00000022636)	ZBTB17 (ENSCHYG00000022216) #36	SAMD11 (ENSCHYG00000021909)
Cetacea	ANCESTRAL SPECIES		ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b.d #13	ENSGT01030000234531.A.b.b.b.i.a.b.c #13	ENSGT01030000234531.A.b.b.b.i.a.a.a.b #10	ENSGT01030000234531.A.b.b.b.i.b #7	ENSGT01030000234531.A.b.b.b.i.a.a.a.a ##15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Blue whale	MODERN SPECIES		TNFRSF1B (ENSBMSG00010007324)	VPS13D (ENSBMSG00010007384)	DHRS3 (ENSBMSG00010007478)	AADACL4 (ENSBMSG00010007488)	CFAP107 (ENSBMSG00010007511)	ENSBMSG00010007532 #13	ENSBMSG00010007544 #13	ENSBMSG00010007602 #10	ENSBMSG00010007792 #7	ENSBMSG00010007917 ##15	ENSBMSG00010007941 #15	ENSBMSG00010007958 #15	LRRC38 (ENSBMSG00010007987) #16	PDPN (ENSBMSG00010007995) #18	PRDM2 (ENSBMSG00010008032) #19	KAZN (ENSBMSG00010008100) #22	ENSBMSG00010008186	ENSBMSG00010008193	TMEM51 (ENSBMSG00010008196) #23	FHAD1 (ENSBMSG00010008207) #24	ENSBMSG00010008241	EFHD2 (ENSBMSG00010008253) #25	CTRC (ENSBMSG00010008262) #26	ENSBMSG00010008297 #27	CASP9 (ENSBMSG00010008360) #28	DNAJC16 (ENSBMSG00010008382) #29	AGMAT (ENSBMSG00010008410) #30	ENSBMSG00010008433 #31	PLEKHM2 (ENSBMSG00010008480) #32	SLC25A34 (ENSBMSG00010008526) #33	TMEM82 (ENSBMSG00010008539) #34
Odontoceti	ANCESTRAL SPECIES		ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b.d #13	ENSGT01030000234531.A.b.b.b.i.a.a.a.b #10	ENSGT01030000234531.A.b.b.b.i.b #7	ENSGT01030000234531.A.b.b.b.i.a.a.a.a ##15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Sperm whale	MODERN SPECIES	214																ENSPCTG00005014737 #22
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b.d #13	ENSGT01030000234531.A.b.b.b.i.b #7	ENSGT01030000234531.A.b.b.b.i.a.a.a.a ##15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b.d #13	ENSGT01030000234531.A.b.b.b.i.b #7	ENSGT01030000234531.A.b.b.b.i.a.a.a.a ##15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Monodontidae	ANCESTRAL SPECIES		ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.a.b.d #13	ENSGT01030000234531.A.b.b.b.i.b #7	ENSGT01030000234531.A.b.b.b.i.a.a.a.a ##15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a #15	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Narwhal	MODERN SPECIES	304	TNFRSF1B (ENSMMNG00015006400)	VPS13D (ENSMMNG00015006173)	DHRS3 (ENSMMNG00015006042)	AADACL3 (ENSMMNG00015006022)	CFAP107 (ENSMMNG00015006001)	ENSMMNG00015005979 #13	ENSMMNG00015005966 #7	ENSMMNG00015005942 ##15	ENSMMNG00015005928 #15	ENSMMNG00015005863 #15	LRRC38 (ENSMMNG00015005800) #16	PDPN (ENSMMNG00015005780) #18	ENSMMNG00015005757	PRDM2 (ENSMMNG00015005720) #19	ENSMMNG00015005668	KAZN (ENSMMNG00015005583) #22	TMEM51 (ENSMMNG00015005532) #23	FHAD1 (ENSMMNG00015005493) #24	EFHD2 (ENSMMNG00015005471) #25	CTRC (ENSMMNG00015005454) #26	ENSMMNG00015005395 #27	CASP9 (ENSMMNG00015005353) #28	DNAJC16 (ENSMMNG00015005297) #29	AGMAT (ENSMMNG00015005248) #30	DDI2 (ENSMMNG00015009565)	RSC1A1 (ENSMMNG00015009553) #31	PLEKHM2 (ENSMMNG00015009498) #32	SLC25A34 (ENSMMNG00015009466) #33	TMEM82 (ENSMMNG00015009449) #34	FBLIM1 (ENSMMNG00015009423) #35	SPEN (ENSMMNG00015009352)
Beluga whale	MODERN SPECIES	51	KIAA2013 (ENSDLEG00000017314)	PLOD1 (ENSDLEG00000017268)	MFN2 (ENSDLEG00000017211)	MIIP (ENSDLEG00000017173)	TNFRSF1B (ENSDLEG00000017139)	VPS13D (ENSDLEG00000015351)	DHRS3 (ENSDLEG00000015176)	CUNH1orf158 (ENSDLEG00000015158)	ENSDLEG00000015097 #13	ENSDLEG00000014811 #7	ENSDLEG00000014598 ##15	LRRC38 (ENSDLEG00000014556) #16	PDPN (ENSDLEG00000014539) #18	PRDM2 (ENSDLEG00000014477) #19	ENSDLEG00000014459 ##22	KAZN (ENSDLEG00000014420) #22	TMEM51 (ENSDLEG00000014403) #23	FHAD1 (ENSDLEG00000014350) #24	EFHD2 (ENSDLEG00000014322) #25	CTRC (ENSDLEG00000014286) #26	ENSDLEG00000014265 #27	CASP9 (ENSDLEG00000014226) #28	DNAJC16 (ENSDLEG00000014190) #29	AGMAT (ENSDLEG00000014173) #30	ENSDLEG00000014150 #31	PLEKHM2 (ENSDLEG00000014078) #32	SLC25A34 (ENSDLEG00000014059) #33	TMEM82 (ENSDLEG00000014032) #34	FBLIM1 (ENSDLEG00000013991) #35	SPEN (ENSDLEG00000013956)	ZBTB17 (ENSDLEG00000013910) #36
Vaquita	MODERN SPECIES		MIIP (ENSPSNG00000012075)	TNFRSF8 (ENSPSNG00000012138)	TNFRSF1B (ENSPSNG00000012455)	VPS13D (ENSPSNG00000012531)	DHRS3 (ENSPSNG00000012639)	CFAP107 (ENSPSNG00000012671)	ENSPSNG00000012759 #13	ENSPSNG00000012912 #7	ENSPSNG00000013025 ##15	ENSPSNG00000013486 #15	ENSPSNG00000013599 #15	LRRC38 (ENSPSNG00000014112) #16	PDPN (ENSPSNG00000014169) #18	ENSPSNG00000014314 #19	ENSPSNG00000014427	KAZN (ENSPSNG00000014520) #22	ENSPSNG00000015276	TMEM51 (ENSPSNG00000015327) #23	FHAD1 (ENSPSNG00000015379) #24	ENSPSNG00000015562	EFHD2 (ENSPSNG00000015611) #25	CTRC (ENSPSNG00000015637) #26	ENSPSNG00000015787 #27	CASP9 (ENSPSNG00000016214) #28	DNAJC16 (ENSPSNG00000016286) #29	AGMAT (ENSPSNG00000016383) #30	DDI2 (ENSPSNG00000016493)	RSC1A1 (ENSPSNG00000016538) #31	PLEKHM2 (ENSPSNG00000000003) #32	SLC25A34 (ENSPSNG00000000006) #33	TMEM82 (ENSPSNG00000000008) #34
Dolphin	MODERN SPECIES	2513																KAZN (ENSTTRG00000017165) #22	ENSTTRG00000017168
Camelidae	ANCESTRAL SPECIES	3	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b.i.b.b #7	ENSGT01030000234531.A.b.b.b.i.b.a #7	ENSGT00940000163979	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00390000002770 #20	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Arabian camel	DUPLICATION
Arabian camel	MODERN SPECIES	4	PLOD1 (ENSCDRG00005017719)	MFN2 (ENSCDRG00005017822)	MIIP (ENSCDRG00005017918)	TNFRSF8 (ENSCDRG00005017963)	TNFRSF1B (ENSCDRG00005018060)	VPS13D (ENSCDRG00005018211)	DHRS3 (ENSCDRG00005018610)	AADACL3 (ENSCDRG00005018643)	CFAP107 (ENSCDRG00005018678)	ENSCDRG00005018739 #7	ENSCDRG00005018920 #7	ENSCDRG00005019181	PDPN (ENSCDRG00005019191) #18	PRDM2 (ENSCDRG00005019238) #19	ENSCDRG00005019343 #20	ENSCDRG00005019377 #22	TMEM51 (ENSCDRG00005019540) #23	FHAD1 (ENSCDRG00005019578) #24	EFHD2 (ENSCDRG00005019753) #25	CTRC (ENSCDRG00005019769) #26	ENSCDRG00005019791 #27	CASP9 (ENSCDRG00005019814) #28	DNAJC16 (ENSCDRG00005019829) #29	AGMAT (ENSCDRG00005019855) #30	ENSCDRG00005019881 #31	PLEKHM2 (ENSCDRG00005019947) #32	SLC25A34 (ENSCDRG00005020338) #33	TMEM82 (ENSCDRG00005020345) #34	FBLIM1 (ENSCDRG00005003370) #35	SPEN (ENSCDRG00005003423)	ZBTB17 (ENSCDRG00005003563) #36
Arabian camel	MODERN SPECIES	21	NSMAF (ENSCDRG00005020419)	TOX (ENSCDRG00005020469)	CA8 (ENSCDRG00005020483)	RAB2A (ENSCDRG00005020500)	CHD7 (ENSCDRG00005020522)	CLVS1 (ENSCDRG00005020550)	ASPH (ENSCDRG00005020568)	NKAIN3 (ENSCDRG00005020651)	GGH (ENSCDRG00005020657)	TTPA (ENSCDRG00005020665)	ENSCDRG00005020671	YTHDF3 (ENSCDRG00005020678)	ENSCDRG00005020699	ENSCDRG00005020705	CYP7B1 (ENSCDRG00005020713)	ENSCDRG00005020716 #22	ARMC1 (ENSCDRG00005020720)	MTFR1 (ENSCDRG00005020730)	PDE7A (ENSCDRG00005020748)	DNAJC5B (ENSCDRG00005020764)	TRIM55 (ENSCDRG00005020793)	CRH (ENSCDRG00005020833)	RRS1 (ENSCDRG00005020834)	ADHFE1 (ENSCDRG00005020841)	VXN (ENSCDRG00005020864)	MYBL1 (ENSCDRG00005020892)	VCPIP1 (ENSCDRG00005020916)	SGK3 (ENSCDRG00005020926)	MCMDC2 (ENSCDRG00005020934)	TCF24 (ENSCDRG00005020969)	PPP1R42 (ENSCDRG00005020972)
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00910000148116	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b
Carnivora	ANCESTRAL SPECIES	1	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00910000148116	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Caniformia	ANCESTRAL SPECIES	2	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000170703.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00910000148116	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Ursidae	ANCESTRAL SPECIES		ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000170703.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b	ENSGT00940000159957 #36	ENSGT00390000000265
Ursus	ANCESTRAL SPECIES		ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT00940000162571 #16	ENSGT00940000163979	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b	ENSGT00940000159957.y #36	ENSGT00390000000265
American black bear	MODERN SPECIES	1361																KAZN (ENSUAMG00000007169) #22
Polar bear	MODERN SPECIES	189	NPPB (ENSUMAG00000022754)	PLOD1 (ENSUMAG00000022265)	MFN2 (ENSUMAG00000022141)	MIIP (ENSUMAG00000022126)	TNFRSF8 (ENSUMAG00000022114)	ENSUMAG00000022101	ENSUMAG00000022092	VPS13D (ENSUMAG00000021837)	DHRS3 (ENSUMAG00000021788)	AADACL4 (ENSUMAG00000021786)	AADACL3 (ENSUMAG00000021783)	CFAP107 (ENSUMAG00000021780)	ENSUMAG00000021779	ENSUMAG00000021778 #18	PRDM2 (ENSUMAG00000021770) #19	KAZN (ENSUMAG00000021744) #22	ENSUMAG00000021738 #23	FHAD1 (ENSUMAG00000021726) #24	EFHD2 (ENSUMAG00000021718) #25	CTRC (ENSUMAG00000021713) #26	CASP9 (ENSUMAG00000021709) #28	DNAJC16 (ENSUMAG00000021707) #29	AGMAT (ENSUMAG00000021705) #30	ENSUMAG00000021700 #31	PLEKHM2 (ENSUMAG00000021666) #32	SLC25A34 (ENSUMAG00000021659) #33	FBLIM1 (ENSUMAG00000021656) #35	SPEN (ENSUMAG00000021641)	ENSUMAG00000021628 #36	SRARP (ENSUMAG00000021624)	HSPB7 (ENSUMAG00000021617)
Giant Panda	MODERN SPECIES	2	KIAA2013 (ENSAMEG00000009882)	PLOD1 (ENSAMEG00000009887)	MFN2 (ENSAMEG00000010033)	MIIP (ENSAMEG00000010114)	TNFRSF8 (ENSAMEG00000010132)	TNFRSF1B (ENSAMEG00000010153)	VPS13D (ENSAMEG00000010179)	ENSAMEG00000000611	DHRS3 (ENSAMEG00000006744)	AADACL4 (ENSAMEG00000006740)	AADACL3 (ENSAMEG00000030191)	CFAP107 (ENSAMEG00000006730)	LRRC38 (ENSAMEG00000006725) #16	PDPN (ENSAMEG00000029968) #18	PRDM2 (ENSAMEG00000006714) #19	KAZN (ENSAMEG00000011994) #22	TMEM51 (ENSAMEG00000027328) #23	FHAD1 (ENSAMEG00000011967) #24	ENSAMEG00000027158 #25	ENSAMEG00000011940 #26	ENSAMEG00000011912 #28	ENSAMEG00000011891 #29	AGMAT (ENSAMEG00000011881) #30	ENSAMEG00000018736 #31	PLEKHM2 (ENSAMEG00000011853) #32	SLC25A34 (ENSAMEG00000011844) #33	TMEM82 (ENSAMEG00000011841) #34	FBLIM1 (ENSAMEG00000011829) #35	SPEN (ENSAMEG00000011817)	ENSAMEG00000030804 #36	SRARP (ENSAMEG00000030564)
Mustelinae	ANCESTRAL SPECIES		ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800.c	ENSGT00950000183083.b	ENSGT00940000170703.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00910000148116	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744.c #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
American mink	MODERN SPECIES	9	MFN2 (ENSNVIG00000010611)	MIIP (ENSNVIG00000010630)	TNFRSF8 (ENSNVIG00000010646)	ENSNVIG00000010660	ENSNVIG00000010689	VPS13D (ENSNVIG00000010731)	ENSNVIG00000010956	DHRS3 (ENSNVIG00000010957)	ADCL4 (ENSNVIG00000010972)	AADACL3 (ENSNVIG00000010988)	CFAP107 (ENSNVIG00000010992)	LRRC38 (ENSNVIG00000011014) #16	PDPN (ENSNVIG00000011020) #18	PRDM2 (ENSNVIG00000011077) #19	ENSNVIG00000011151	KAZN (ENSNVIG00000011169) #22	TMEM51 (ENSNVIG00000011243) #23	FHAD1 (ENSNVIG00000011294) #24	EFHD2 (ENSNVIG00000011427) #25	CTRC (ENSNVIG00000011438) #26	CASP9 (ENSNVIG00000011449) #28	DJC16 (ENSNVIG00000011474) #29	AGMAT (ENSNVIG00000011545) #30	DDI2 (ENSNVIG00000011569)	ENSNVIG00000011620 #31	PLEKHM2 (ENSNVIG00000011636) #32	SLC25A34 (ENSNVIG00000011676) #33	TMEM82 (ENSNVIG00000011685) #34	FBLI1 (ENSNVIG00000011696) #35	SPEN (ENSNVIG00000011765)	ZBTB17 (ENSNVIG00000011847) #36
Ferret	MODERN SPECIES	167	MIIP (ENSMPUG00000016386)	TNFRSF8 (ENSMPUG00000016383)	TNFRSF1B (ENSMPUG00000016381)	VPS13D (ENSMPUG00000016376)	ENSMPUG00000016374	ENSMPUG00000016373	DHRS3 (ENSMPUG00000016371)	AADACL4 (ENSMPUG00000016369)	AADACL3 (ENSMPUG00000016368)	CFAP107 (ENSMPUG00000016365)	ENSMPUG00000016357 #15	LRRC38 (ENSMPUG00000016355) #16	PDPN (ENSMPUG00000016354) #18	ENSMPUG00000016353	PRDM2 (ENSMPUG00000016352) #19	KAZN (ENSMPUG00000016351) #22	TMEM51 (ENSMPUG00000016350) #23	FHAD1 (ENSMPUG00000016348) #24	EFHD2 (ENSMPUG00000016346) #25	CTRC (ENSMPUG00000016345) #26	CASP9 (ENSMPUG00000016342) #28	DNAJC16 (ENSMPUG00000016341) #29	AGMAT (ENSMPUG00000016340) #30	DDI2 (ENSMPUG00000016332)	RSC1A1 (ENSMPUG00000018833) #31	PLEKHM2 (ENSMPUG00000016329) #32	SLC25A34 (ENSMPUG00000016326) #33	TMEM82 (ENSMPUG00000016323) #34	FBLIM1 (ENSMPUG00000016318) #35	SPEN (ENSMPUG00000016317)	ZBTB17 (ENSMPUG00000016313) #36
Canidae	ANCESTRAL SPECIES	14	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215.c	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT01040000241632	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Red fox	MODERN SPECIES	88	MIIP (ENSVVUG00000028595)	TNFRSF1B (ENSVVUG00000028616)	VPS13D (ENSVVUG00000028650)	ENSVVUG00000028868	DHRS3 (ENSVVUG00000028869)	AADACL4 (ENSVVUG00000028871)	AADACL3 (ENSVVUG00000028875)	CUNH1orf158 (ENSVVUG00000028877)	ENSVVUG00000028879 #16	PDPN (ENSVVUG00000028880) #18	PRDM2 (ENSVVUG00000028889) #19	ENSVVUG00000028901	ENSVVUG00000028903	ENSVVUG00000028915	ENSVVUG00000028916 ##22	KAZN (ENSVVUG00000028921) #22	TMEM51 (ENSVVUG00000028929) #23	FHAD1 (ENSVVUG00000028931) #24	EFHD2 (ENSVVUG00000028938) #25	CASP9 (ENSVVUG00000028939) #28	CTRC (ENSVVUG00000028940) #26	DNAJC16 (ENSVVUG00000028941) #29	AGMAT (ENSVVUG00000028942) #30	DDI2 (ENSVVUG00000028943)	RSC1A1 (ENSVVUG00000028944) #31	PLEKHM2 (ENSVVUG00000028945) #32	SLC25A34 (ENSVVUG00000028947) #33	TMEM82 (ENSVVUG00000028948) #34	FBLIM1 (ENSVVUG00000028949) #35	SPEN (ENSVVUG00000028951)	ZBTB17 (ENSVVUG00000028953) #36
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215.c	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT01040000241632	ENSGT00940000158724	ENSGT00940000163565	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Dog	MODERN SPECIES	11	NPPA (ENSCAFG00845001994)	KIAA2013 (ENSCAFG00845001915)	PLOD1 (ENSCAFG00845001815)	MFN2 (ENSCAFG00845001739)	MIIP (ENSCAFG00845001629)	TNFRSF1B (ENSCAFG00845001488)	ENSCAFG00845001458	ENSCAFG00845001424	DHRS3 (ENSCAFG00845001328)	ENSCAFG00845001302	AADACL3 (ENSCAFG00845001278)	CFAP107 (ENSCAFG00845001256)	LRRC38 (ENSCAFG00845001236) #16	PDPN (ENSCAFG00845001081) #18	PRDM2 (ENSCAFG00845001004) #19	KAZN (ENSCAFG00845000851) #22	TMEM51 (ENSCAFG00845000766) #23	FHAD1 (ENSCAFG00845000555) #24	ENSCAFG00845000444 #26	CASP9 (ENSCAFG00845000379) #28	DNAJC16 (ENSCAFG00845000315) #29	AGMAT (ENSCAFG00845000281) #30	ENSCAFG00845000240 #31	PLEKHM2 (ENSCAFG00845004994) #32	SLC25A34 (ENSCAFG00845004977) #33	TMEM82 (ENSCAFG00845004965) #34	FBLIM1 (ENSCAFG00845004948) #35	SPEN (ENSCAFG00845004928)	ZBTB17 (ENSCAFG00845004912) #36	SRARP (ENSCAFG00845004899)	HSPB7 (ENSCAFG00845004889)
Dingo	MODERN SPECIES	41								DHRS3 (ENSCAFG00020004688)	AADACL4 (ENSCAFG00020004697)	AADACL3 (ENSCAFG00020004712)	CFAP107 (ENSCAFG00020004715)	LRRC38 (ENSCAFG00020004735) #16	PDPN (ENSCAFG00020004738) #18	PRDM2 (ENSCAFG00020004754) #19	ENSCAFG00020004760 ##22	KAZN (ENSCAFG00020004768) #22	ENSCAFG00020004777	TMEM51 (ENSCAFG00020004778) #23	FHAD1 (ENSCAFG00020004782) #24	ENSCAFG00020004790 #25	CTRC (ENSCAFG00020004793) #26	CASP9 (ENSCAFG00020004802) #28	ENSCAFG00020004806 #29	AGMAT (ENSCAFG00020004808) #30	DDI2 (ENSCAFG00020004832)	RSC1A1 (ENSCAFG00020004838) #31	PLEKHM2 (ENSCAFG00020004845) #32	SLC25A34 (ENSCAFG00020004858) #33	TMEM82 (ENSCAFG00020004877) #34	FBLIM1 (ENSCAFG00020004885) #35	ENSCAFG00020004893
Felidae	ANCESTRAL SPECIES	18	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00910000148116	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Panthera	ANCESTRAL SPECIES	4	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00910000148116	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
Tiger	DUPLICATION
Tiger	MODERN SPECIES	187	MFN2 (ENSPTIG00000020008)	ENSPTIG00000019970	ENSPTIG00000019424	TNFRSF1B (ENSPTIG00000018597)	VPS13D (ENSPTIG00000017066)	DHRS3 (ENSPTIG00000016902)	AADACL4 (ENSPTIG00000015939)	AADACL3 (ENSPTIG00000015446)	CFAP107 (ENSPTIG00000015353)	ENSPTIG00000014625 #15	ENSPTIG00000013585 #18	PRDM2 (ENSPTIG00000013350) #19	ENSPTIG00000013314	ENSPTIG00000013102 #20	ENSPTIG00000012597 #22	ENSPTIG00000012333 #22	ENSPTIG00000012301 #23	ENSPTIG00000011875 #24	CTRC (ENSPTIG00000011663) #26	CASP9 (ENSPTIG00000011356) #28	DNAJC16 (ENSPTIG00000010992) #29	AGMAT (ENSPTIG00000010031) #30	DDI2 (ENSPTIG00000009951)	PLEKHM2 (ENSPTIG00000009093) #32	SLC25A34 (ENSPTIG00000008906) #33	ENSPTIG00000008568 #35	SRARP (ENSPTIG00000007048)	HSPB7 (ENSPTIG00000006884)	ENSPTIG00000004645	FAM131C (ENSPTIG00000002805)	EPHA2 (ENSPTIG00000000837)
Tiger	MODERN SPECIES	187	PLOD1 (ENSPTIG00000020156)	MFN2 (ENSPTIG00000020008)	ENSPTIG00000019970	ENSPTIG00000019424	TNFRSF1B (ENSPTIG00000018597)	VPS13D (ENSPTIG00000017066)	DHRS3 (ENSPTIG00000016902)	AADACL4 (ENSPTIG00000015939)	AADACL3 (ENSPTIG00000015446)	CFAP107 (ENSPTIG00000015353)	ENSPTIG00000014625 #15	ENSPTIG00000013585 #18	PRDM2 (ENSPTIG00000013350) #19	ENSPTIG00000013314	ENSPTIG00000013102 #20	ENSPTIG00000012597 #22	ENSPTIG00000012333 #22	ENSPTIG00000012301 #23	ENSPTIG00000011875 #24	CTRC (ENSPTIG00000011663) #26	CASP9 (ENSPTIG00000011356) #28	DNAJC16 (ENSPTIG00000010992) #29	AGMAT (ENSPTIG00000010031) #30	DDI2 (ENSPTIG00000009951)	PLEKHM2 (ENSPTIG00000009093) #32	SLC25A34 (ENSPTIG00000008906) #33	ENSPTIG00000008568 #35	SRARP (ENSPTIG00000007048)	HSPB7 (ENSPTIG00000006884)	ENSPTIG00000004645	FAM131C (ENSPTIG00000002805)
Panthera_a	ANCESTRAL SPECIES	14	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00910000148116	ENSGT00390000002770 #20	ENSGT00940000154570.a.b ##22	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b	ENSGT00940000159957 #36
lion	DUPLICATION
lion	MODERN SPECIES	8	MIIP (ENSPLOG00000006597)	ENSPLOG00000006579	TNFRSF1B (ENSPLOG00000006521)	VPS13D (ENSPLOG00000006024)	DHRS3 (ENSPLOG00000005821)	AADACL4 (ENSPLOG00000005774)	AADACL3 (ENSPLOG00000005743)	CFAP107 (ENSPLOG00000005718)	ENSPLOG00000005536 #15	LRRC38 (ENSPLOG00000005430) #16	PDPN (ENSPLOG00000005381) #18	PRDM2 (ENSPLOG00000005291) #19	ENSPLOG00000005262 #20	ENSPLOG00000005254 ##22	ENSPLOG00000005241 #22	ENSPLOG00000005226 #22	TMEM51 (ENSPLOG00000005219) #23	ENSPLOG00000005191 #24	EFHD2 (ENSPLOG00000005163) #25	CTRC (ENSPLOG00000005134) #26	CASP9 (ENSPLOG00000005099) #28	DNAJC16 (ENSPLOG00000005054) #29	AGMAT (ENSPLOG00000005024) #30	DDI2 (ENSPLOG00000004991)	PLEKHM2 (ENSPLOG00000004965) #32	SLC25A34 (ENSPLOG00000004954) #33	TMEM82 (ENSPLOG00000004930) #34	FBLIM1 (ENSPLOG00000004900) #35	SPEN (ENSPLOG00000004845)	ZBTB17 (ENSPLOG00000004804) #36	SRARP (ENSPLOG00000004770)
lion	MODERN SPECIES	8	MFN2 (ENSPLOG00000006631)	MIIP (ENSPLOG00000006597)	ENSPLOG00000006579	TNFRSF1B (ENSPLOG00000006521)	VPS13D (ENSPLOG00000006024)	DHRS3 (ENSPLOG00000005821)	AADACL4 (ENSPLOG00000005774)	AADACL3 (ENSPLOG00000005743)	CFAP107 (ENSPLOG00000005718)	ENSPLOG00000005536 #15	LRRC38 (ENSPLOG00000005430) #16	PDPN (ENSPLOG00000005381) #18	PRDM2 (ENSPLOG00000005291) #19	ENSPLOG00000005262 #20	ENSPLOG00000005254 ##22	ENSPLOG00000005241 #22	ENSPLOG00000005226 #22	TMEM51 (ENSPLOG00000005219) #23	ENSPLOG00000005191 #24	EFHD2 (ENSPLOG00000005163) #25	CTRC (ENSPLOG00000005134) #26	CASP9 (ENSPLOG00000005099) #28	DNAJC16 (ENSPLOG00000005054) #29	AGMAT (ENSPLOG00000005024) #30	DDI2 (ENSPLOG00000004991)	PLEKHM2 (ENSPLOG00000004965) #32	SLC25A34 (ENSPLOG00000004954) #33	TMEM82 (ENSPLOG00000004930) #34	FBLIM1 (ENSPLOG00000004900) #35	SPEN (ENSPLOG00000004845)	ZBTB17 (ENSPLOG00000004804) #36
leopard	MODERN SPECIES	37	MFN2 (ENSPPRG00000007167)	MIIP (ENSPPRG00000006601)	TNFRSF8 (ENSPPRG00000006333)	TNFRSF1B (ENSPPRG00000004270)	VPS13D (ENSPPRG00000003625)	DHRS3 (ENSPPRG00000003032)	AADACL4 (ENSPPRG00000002552)	AADACL3 (ENSPPRG00000002379)	CFAP107 (ENSPPRG00000002122)	ENSPPRG00000001268 #15	LRRC38 (ENSPPRG00000000810) #16	PDPN (ENSPPRG00000000655) #18	PRDM2 (ENSPPRG00000022577) #19	ENSPPRG00000020081	ENSPPRG00000014940 #20	ENSPPRG00000014628 #22	ENSPPRG00000012106	TMEM51 (ENSPPRG00000011953) #23	ENSPPRG00000011408 #24	EFHD2 (ENSPPRG00000010382) #25	CTRC (ENSPPRG00000009465) #26	CASP9 (ENSPPRG00000009345) #28	DNAJC16 (ENSPPRG00000008217) #29	AGMAT (ENSPPRG00000007223) #30	DDI2 (ENSPPRG00000007095)	RSC1A1 (ENSPPRG00000014925) #31	PLEKHM2 (ENSPPRG00000006492) #32	SLC25A34 (ENSPPRG00000004027) #33	TMEM82 (ENSPPRG00000003864) #34	FBLIM1 (ENSPPRG00000003677) #35	ZBTB17 (ENSPPRG00000002547) #36
Cat	MODERN SPECIES	239	NPPB (ENSFCAG00000000072)	KIAA2013 (ENSFCAG00000030474)	PLOD1 (ENSFCAG00000000074)	MFN2 (ENSFCAG00000000076)	MIIP (ENSFCAG00000000077)	TNFRSF8 (ENSFCAG00000001453)	TNFRSF1B (ENSFCAG00000003778)	VPS13D (ENSFCAG00000003779)	DHRS3 (ENSFCAG00000000576)	AADACL3 (ENSFCAG00000031519)	CFAP107 (ENSFCAG00000027769)	ENSFCAG00000023782 #15	LRRC38 (ENSFCAG00000000580) #16	PDPN (ENSFCAG00000007570) #18	PRDM2 (ENSFCAG00000032471) #19	KAZN (ENSFCAG00000038995) #22	TMEM51 (ENSFCAG00000043261) #23	ENSFCAG00000003267 #24	EFHD2 (ENSFCAG00000041741) #25	CTRC (ENSFCAG00000003268) #26	CASP9 (ENSFCAG00000026776) #28	DNAJC16 (ENSFCAG00000011582) #29	AGMAT (ENSFCAG00000011584) #30	ENSFCAG00000011585 #31	PLEKHM2 (ENSFCAG00000011586) #32	SLC25A34 (ENSFCAG00000011588) #33	TMEM82 (ENSFCAG00000011589) #34	FBLIM1 (ENSFCAG00000011590) #35	SPEN (ENSFCAG00000010165)	ZBTB17 (ENSFCAG00000023421) #36	SRARP (ENSFCAG00000044158)
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000154513.A	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b.l
Equus	ANCESTRAL SPECIES	2	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b.j	ENSGT01040000241632	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00390000002770 #20	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b.k	ENSGT00940000157087.a.b.l
Horse	MODERN SPECIES	11	PLOD1 (ENSECAG00000022842)	MFN2 (ENSECAG00000016296)	MIIP (ENSECAG00000014794)	TNFRSF8 (ENSECAG00000014108)	TNFRSF1B (ENSECAG00000012481)	VPS13D (ENSECAG00000016150)	ENSECAG00000045103	DHRS3 (ENSECAG00000013582)	AADACL3 (ENSECAG00000013280)	CFAP107 (ENSECAG00000033407)	ENSECAG00000010285 #15	LRRC38 (ENSECAG00000010195) #16	ENSECAG00000032595 #18	ENSECAG00000050440 #19	PRDM2 (ENSECAG00000008911)	KAZN (ENSECAG00000006829) #22	FHAD1 (ENSECAG00000025126) #24	CTRC (ENSECAG00000025069) #26	ENSECAG00000020902 #27	CASP9 (ENSECAG00000017291) #28	DNAJC16 (ENSECAG00000010422) #29	AGMAT (ENSECAG00000008308) #30	ENSECAG00000041115 #31	PLEKHM2 (ENSECAG00000014652) #32	SLC25A34 (ENSECAG00000013382) #33	TMEM82 (ENSECAG00000013016) #34	FBLIM1 (ENSECAG00000011874) #35	ENSECAG00000050306	SPEN (ENSECAG00000008833)	ZBTB17 (ENSECAG00000024826) #36	SRARP (ENSECAG00000024814)
Donkey	MODERN SPECIES	25	TNFRSF8 (ENSEASG00005016474)	TNFRSF1B (ENSEASG00005033534)	VPS13D (ENSEASG00005016180)	ENSEASG00005031338	DHRS3 (ENSEASG00005016047)	AADACL3 (ENSEASG00005027488)	ENSEASG00005008351	CFAP107 (ENSEASG00005016042)	ENSEASG00005015988 #15	ENSEASG00005015978 #16	ENSEASG00005015975 #18	ENSEASG00005028661	PRDM2 (ENSEASG00005015970) #19	ENSEASG00005027620 #20	ENSEASG00005037107	ENSEASG00005032223 #22	TMEM51 (ENSEASG00005015962) #23	FHAD1 (ENSEASG00005015958) #24	EFHD2 (ENSEASG00005015953) #25	CTRC (ENSEASG00005015948) #26	ENSEASG00005015940 #27	CASP9 (ENSEASG00005015937) #28	DNAJC16 (ENSEASG00005015931) #29	AGMAT (ENSEASG00005015929) #30	ENSEASG00005015927 #31	PLEKHM2 (ENSEASG00005015922) #32	SLC25A34 (ENSEASG00005031113) #33	TMEM82 (ENSEASG00005015917) #34	FBLIM1 (ENSEASG00005015915) #35	ENSEASG00005028986	ENSEASG00005032545
Chiroptera	ANCESTRAL SPECIES		ENSGT00940000154513.A	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b.l
Megabat	MODERN SPECIES	2995																KAZN (ENSPVAG00000006039) #22	ENSPVAG00000006042	TMEM51 (ENSPVAG00000006044) #23	ENSPVAG00000006045 #24
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00940000154513.A	ENSGT00390000007643	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00390000003768	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000162160	ENSGT00390000014553	ENSGT01030000234531.A.b.b.b #15	ENSGT00940000162571 #16	ENSGT00390000000013 #18	ENSGT00940000159410 #19	ENSGT00940000154570.b #22	ENSGT00390000009278 #23	ENSGT00940000154171.A #24	ENSGT00390000012058.c.b #25	ENSGT00940000153216.a.b #26	ENSGT01030000234528.B.a.a #27	ENSGT00940000159698 #28	ENSGT00940000155851 #29	ENSGT00950000183195.a #30	ENSGT00950000182999.a.a	ENSGT00390000005744 #31	ENSGT00390000015175 #32	ENSGT00940000160016 #33	ENSGT00500000045021 #34	ENSGT00940000159003 #35	ENSGT00940000157087.a.b.l
Greater horseshoe bat	MODERN SPECIES	27	PLOD1 (ENSRFEG00010017314)	MFN2 (ENSRFEG00010017368)	MIIP (ENSRFEG00010007938)	TNFRSF8 (ENSRFEG00010008019)	TNFRSF1B (ENSRFEG00010008246)	VPS13D (ENSRFEG00010008330)	DHRS3 (ENSRFEG00010008475)	ENSRFEG00010008557	ENSRFEG00010008603	ENSRFEG00010008691	ENSRFEG00010008754	ENSRFEG00010008828 #15	LRRC38 (ENSRFEG00010008885) #16	PDPN (ENSRFEG00010008924) #18	PRDM2 (ENSRFEG00010009040) #19	KAZN (ENSRFEG00010009239) #22	TMEM51 (ENSRFEG00010009731) #23	FHAD1 (ENSRFEG00010009808) #24	EFHD2 (ENSRFEG00010010221) #25	CTRC (ENSRFEG00010010289) #26	ENSRFEG00010010440 #27	CASP9 (ENSRFEG00010010566) #28	DNAJC16 (ENSRFEG00010010616) #29	AGMAT (ENSRFEG00010010690) #30	ENSRFEG00010010770 #31	PLEKHM2 (ENSRFEG00010010902) #32	SLC25A34 (ENSRFEG00010011058) #33	TMEM82 (ENSRFEG00010011094) #34	FBLIM1 (ENSRFEG00010011168) #35	SPEN (ENSRFEG00010011277)	ZBTB17 (ENSRFEG00010011332) #36
Microbat	DUPLICATION
Microbat	MODERN SPECIES	2767																ENSMLUG00000009858 #22
Microbat	MODERN SPECIES	1593																ENSMLUG00000009830 #22	TMEM51 (ENSMLUG00000009586) #23
Eulipotyphla	ANCESTRAL SPECIES	2573																ENSGT00940000154570.b #22	ENSGT00400000022892
Hedgehog	MODERN SPECIES	8037																ENSEEUG00000015196 #22
Common shrew	MODERN SPECIES	6313																ENSSARG00000009702 #22	ENSSARG00000009715