Euteleostomi ANCESTRAL SPECIES 7 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT01030000234629.C #23 Actinopterygii ANCESTRAL SPECIES 10 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT01030000234629.C #23 Neopterygii ANCESTRAL SPECIES 17 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000166595.a ENSGT00940000156504 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT01030000234629.C #23 Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 123 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.b ENSGT00970000193372.b.a.a ENSGT00390000010895 ENSGT00970000193372.b.a.b ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504 ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C #23 ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00940000160165.a ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d Clupeocephala ANCESTRAL SPECIES 144 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00970000193372.b.b ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C #23 ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00940000160165.a ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b ENSGT01040000240444.A.b.b ENSGT01030000234571.b.b.a.a.a Euteleosteomorpha ANCESTRAL SPECIES 126 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00940000160165.a ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b ENSGT01040000240444.A.b.b Acanthomorphata ANCESTRAL SPECIES 98 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b ENSGT00940000160165.a ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a Euacanthomorphacea ANCESTRAL SPECIES 8 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b ENSGT00940000160165.a ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00940000160281 ENSGT00940000161057 Percomorphaceae ANCESTRAL SPECIES 8 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b ENSGT00940000160165.a ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00940000160281 ENSGT00940000161057 Percomorphaceae_B ANCESTRAL SPECIES 13 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 Ovalentaria ANCESTRAL SPECIES 8 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 Atherinomorphae ANCESTRAL SPECIES 15 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 Oryzias ANCESTRAL SPECIES 8 ENSGT00950000183078.b.a.b #10 ENSGT00950000182929.A ENSGT00940000163374 #12 ENSGT00940000157786 #13 ENSGT00940000157676 #11 ENSGT00940000155162.o.b #14 ENSGT00940000163520.B.g #15 ENSGT00940000163520.A.b.b.b.b #16 ENSGT00940000163520.A.b.b.a #17 ENSGT00940000162978.a.b #18 ENSGT00940000162775 #19 ENSGT00940000154525.b.b #20 ENSGT00940000165141.a ENSGT00940000159302 ENSGT00390000017365.b #21 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00540000072704 ENSGT00940000157083 ENSGT00390000014712.a.g.a ENSGT00940000157853.a Oryzias_a ANCESTRAL SPECIES 51 ENSGT00950000183078.b.a.b #10 ENSGT00950000182929.A ENSGT00940000163374 #12 ENSGT00940000157786 #13 ENSGT00940000157676 #11 ENSGT00940000155162.o.b #14 ENSGT00940000163520.B.g #15 ENSGT00940000163520.A.b.b.b.b #16 ENSGT00940000163520.A.b.b.a #17 ENSGT00940000162978.a.b #18 ENSGT00940000162775 #19 ENSGT00940000154525.b.b #20 ENSGT00940000165141.a ENSGT00940000159302 ENSGT00390000017365.b #21 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00540000072704 ENSGT00940000157083 ENSGT00390000014712.a.g.a ENSGT00940000157853.a Chinese medaka MODERN SPECIES 1060 ENSOSIG00000003101 #7 SIK3 (ENSOSIG00000003169) #8 SIDT2 (ENSOSIG00000005029) #9 ENSOSIG00000005248 #10 pcsk7 (ENSOSIG00000005269) #11 ENSOSIG00000005840 #12 bace1 (ENSOSIG00000005850) #13 tagln (ENSOSIG00000005871) #14 ENSOSIG00000005876 #15 cbln20 (ENSOSIG00000005879) #16 cbln20 (ENSOSIG00000005881) #17 ENSOSIG00000005884 #18 nudt8 (ENSOSIG00000005885) #19 ENSOSIG00000005887 #20 zgc:162193 (ENSOSIG00000005890) #21 SLC25A36 (ENSOSIG00000005892) #22 spsb4a (ENSOSIG00000005910) #23 CLSTN2 (ENSOSIG00000005916) #24 Japanese Medaka HdrR MODERN SPECIES 4 apoa1b (ENSORLG00000015744) ENSORLG00000028989 #12 ENSORLG00000015728 bace1 (ENSORLG00000025617) #13 pcsk7 (ENSORLG00000015722) #11 tagln (ENSORLG00000015714) #14 ENSORLG00000021874 #15 cbln20 (ENSORLG00000015708) #16 cbln20 (ENSORLG00000015707) #17 ENSORLG00000015701 #18 nudt8 (ENSORLG00000015682) #19 MFRP (ENSORLG00000015680) #20 ENSORLG00000015672 pnkp (ENSORLG00000015667) zgc:162193 (ENSORLG00000015653) #21 ENSORLG00000015639 #22 spsb4a (ENSORLG00000015620) #23 ENSORLG00000015614 #24 lpar5b (ENSORLG00000015601) rbp2a (ENSORLG00000022031) COPB2 (ENSORLG00000015574) mrps22 (ENSORLG00000015543) foxl2a (ENSORLG00000020203) PIK3CB (ENSORLG00000015529) her13 (ENSORLG00000015432) PER2 (ENSORLG00000015456) her8.2 (ENSORLG00000015428) ENSORLG00000026928 ENSORLG00000022288 ENSORLG00000015424 gkup (ENSORLG00000025988) Oryzias_b ANCESTRAL SPECIES 38 ENSGT00950000183078.b.a.b #10 ENSGT00950000182929.A ENSGT00940000163374 #12 ENSGT00940000157786 #13 ENSGT00940000157676 #11 ENSGT00940000155162.o.b #14 ENSGT00940000163520.B.g #15 ENSGT00940000163520.A.b.b.b.b #16 ENSGT00940000163520.A.b.b.a #17 ENSGT00940000162978.a.b #18 ENSGT00940000162775 #19 ENSGT00940000154525.b.b #20 ENSGT00940000165141.a ENSGT00940000159302 ENSGT00390000017365.b #21 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00540000072704 ENSGT00940000157083 ENSGT00390000014712.a.g.a ENSGT00940000157853.a Indian medaka MODERN SPECIES 19 rps4x (ENSOMEG00000020132) cited1 (ENSOMEG00000020143) hdac8 (ENSOMEG00000020217) sycp3 (ENSOMEG00000020251) ENSOMEG00000020344 leap2 (ENSOMEG00000020370) ENSOMEG00000020380 ##17 ENSOMEG00000020389 ENSOMEG00000020407 ENSOMEG00000020415 ENSOMEG00000020449 hnrnpc (ENSOMEG00000020488) ndrg2 (ENSOMEG00000020643) ENSOMEG00000020724 ENSOMEG00000021257 SLC25A36 (ENSOMEG00000021336) #22 spsb4a (ENSOMEG00000021373) #23 ENSOMEG00000021411 znf219 (ENSOMEG00000021440) ENSOMEG00000021462 btr12 (ENSOMEG00000021478) ENSOMEG00000021652 ENSOMEG00000021736 ENSOMEG00000021768 ENSOMEG00000021780 ##17 ENSOMEG00000021794 ENSOMEG00000021810 ENSOMEG00000021820 ENSOMEG00000021859 ENSOMEG00000021875 ENSOMEG00000021881 Javanese ricefish MODERN SPECIES 4 SIK3 (ENSOJAG00000010711) #8 SIDT2 (ENSOJAG00000010763) #9 CEP164 (ENSOJAG00000011238) #10 apoa1b (ENSOJAG00000011266) ENSOJAG00000011303 #12 bace1 (ENSOJAG00000011345) #13 pcsk7 (ENSOJAG00000011470) #11 tagln (ENSOJAG00000012135) #14 ENSOJAG00000012154 #15 cbln20 (ENSOJAG00000012243) #17 ENSOJAG00000012260 #18 nudt8 (ENSOJAG00000012280) #19 ENSOJAG00000012290 pnkp (ENSOJAG00000012584) zgc:162193 (ENSOJAG00000013822) #21 SLC25A36 (ENSOJAG00000013846) #22 spsb4a (ENSOJAG00000013867) #23 CLSTN2 (ENSOJAG00000013906) #24 lpar5b (ENSOJAG00000014509) ENSOJAG00000014518 rbp2a (ENSOJAG00000014549) COPB2 (ENSOJAG00000014602) mrps22 (ENSOJAG00000014852) PIK3CB (ENSOJAG00000014934) PER2 (ENSOJAG00000015635) her13 (ENSOJAG00000016109) her8.2 (ENSOJAG00000016131) ENSOJAG00000016142 usf1l (ENSOJAG00000016387) ENSOJAG00000016398 abcg4b (ENSOJAG00000016402) Cyprinodontiformes ANCESTRAL SPECIES 12 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 Cyprinodontoidei ANCESTRAL SPECIES 9 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 Poeciliinae ANCESTRAL SPECIES 14 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000162556.C.c ENSGT00940000161289 ENSGT00530000063405.b.e ENSGT00940000162996.y.a.b.a ENSGT00510000047299.d ENSGT00940000160721 Poecilia ANCESTRAL SPECIES 2 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000162556.C.c ENSGT00940000161289 ENSGT00530000063405.b.e ENSGT00940000162996.y.a.b.a ENSGT00940000162996.y.a.a.c.a.a ENSGT00510000047299.d NAME_6 ANCESTRAL SPECIES 60 ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000162556.C.c ENSGT00940000161289 ENSGT00530000063405.b.e ENSGT00940000162996.y.a.b.a ENSGT00940000162996.y.a.b.b.b ENSGT00940000162996.y.a.a.c.a.a Amazon molly MODERN SPECIES 325 pxylp1 (ENSPFOG00000008537) SLC25A36 (ENSPFOG00000008439) #22 spsb4a (ENSPFOG00000008391) #23 CLSTN2 (ENSPFOG00000007669) #24 lpar5b (ENSPFOG00000020309) rbp2a (ENSPFOG00000007568) ENSPFOG00000007552 COPB2 (ENSPFOG00000007284) mrps22 (ENSPFOG00000007141) foxl2b (ENSPFOG00000020308) PIK3CB (ENSPFOG00000006566) PER2 (ENSPFOG00000006138) ENSPFOG00000006124 usp2a (ENSPFOG00000005925) tbcela (ENSPFOG00000005811) ENSPFOG00000022258 ENSPFOG00000004739 Sailfin molly MODERN SPECIES 695 pxylp1 (ENSPLAG00000008564) SLC25A36 (ENSPLAG00000008595) #22 spsb4a (ENSPLAG00000008604) #23 Guppy MODERN SPECIES 443 psmd2 (ENSPREG00000010322) serpine2 (ENSPREG00000010402) wdfy1 (ENSPREG00000010455) dhrs12la (ENSPREG00000010484) AP1S3 (ENSPREG00000010517) ENSPREG00000010524 kcne4 (ENSPREG00000010533) acsl3a (ENSPREG00000010542) farsb (ENSPREG00000010583) ENSPREG00000010621 SGPP2 (ENSPREG00000010631) ENSPREG00000010649 pax3b (ENSPREG00000010656) epha4a (ENSPREG00000010744) pxylp1 (ENSPREG00000010798) SLC25A36 (ENSPREG00000010816) #22 spsb4a (ENSPREG00000010844) #23 CLSTN2 (ENSPREG00000010875) #24 lpar5b (ENSPREG00000010933) ENSPREG00000010948 rbp2a (ENSPREG00000010960) ENSPREG00000010971 COPB2 (ENSPREG00000010996) mrps22 (ENSPREG00000011070) PIK3CB (ENSPREG00000011211) PER2 (ENSPREG00000011271) ENSPREG00000011295 usp2a (ENSPREG00000011319) tbcela (ENSPREG00000011348) ENSPREG00000011380 ENSPREG00000011466 Platyfish MODERN SPECIES 9 prss16 (ENSXMAG00000008194) serpine2 (ENSXMAG00000008196) wdfy1 (ENSXMAG00000008220) dhrs12la (ENSXMAG00000008246) ENSXMAG00000008263 AP1S3 (ENSXMAG00000008255) kcne4 (ENSXMAG00000008266) acsl3a (ENSXMAG00000008269) ENSXMAG00000029278 farsb (ENSXMAG00000008280) ENSXMAG00000021789 SGPP2 (ENSXMAG00000008302) pax3b (ENSXMAG00000008304) epha4a (ENSXMAG00000008306) pxylp1 (ENSXMAG00000008348) SLC25A36 (ENSXMAG00000008353) #22 spsb4a (ENSXMAG00000008361) #23 CLSTN2 (ENSXMAG00000008362) #24 lpar5b (ENSXMAG00000020218) rbp2a (ENSXMAG00000006544) COPB2 (ENSXMAG00000006552) mrps22 (ENSXMAG00000006580) ENSXMAG00000029209 foxl2b (ENSXMAG00000020219) PIK3CB (ENSXMAG00000006594) PER2 (ENSXMAG00000006651) ENSXMAG00000006705 usp2a (ENSXMAG00000006708) tbcela (ENSXMAG00000006724) ENSXMAG00000006737 PGAP2 (ENSXMAG00000006831) NAME_4 ANCESTRAL SPECIES 102 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00940000163911.a.a.a.s ENSGT00940000163911.a.a.b.a.a.a.b.d.a.a Mummichog MODERN SPECIES 2202 prss16 (ENSFHEG00000021150) serpine2 (ENSFHEG00000021132) wdfy1 (ENSFHEG00000021120) dhrs12la (ENSFHEG00000021061) AP1S3 (ENSFHEG00000021028) ENSFHEG00000021018 kcne4 (ENSFHEG00000020998) acsl3a (ENSFHEG00000020987) farsb (ENSFHEG00000020939) ENSFHEG00000020916 SGPP2 (ENSFHEG00000020896) ENSFHEG00000020864 pax3b (ENSFHEG00000020858) epha4a (ENSFHEG00000020823) pxylp1 (ENSFHEG00000020749) SLC25A36 (ENSFHEG00000020736) #22 spsb4a (ENSFHEG00000020702) #23 CLSTN2 (ENSFHEG00000020690) #24 lpar5b (ENSFHEG00000020648) rbp2a (ENSFHEG00000020640) ENSFHEG00000020604 COPB2 (ENSFHEG00000020594) mrps22 (ENSFHEG00000020557) foxl2b (ENSFHEG00000020548) ENSFHEG00000020532 PIK3CB (ENSFHEG00000020512) PER2 (ENSFHEG00000020488) ENSFHEG00000020468 Sheepshead minnow MODERN SPECIES 73 SLC25A36 (ENSCVAG00000021401) #22 Aplocheiloidei ANCESTRAL SPECIES 246 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00390000006095 ENSGT00940000157522.b ENSGT00940000156342.d ENSGT00940000161398.e Mangrove rivulus MODERN SPECIES 62 ENSKMAG00000003188 lhx1a (ENSKMAG00000003163) bcas3 (ENSKMAG00000003039) tbx2b (ENSKMAG00000002976) tbx4 (ENSKMAG00000002942) brip1 (ENSKMAG00000002856) PPM1D (ENSKMAG00000002841) appbp2 (ENSKMAG00000002779) ENSKMAG00000002765 USP6 (ENSKMAG00000002625) ENSKMAG00000002543 tmem97 (ENSKMAG00000002514) ULK2 (ENSKMAG00000002479) aldh3a2a (ENSKMAG00000002434) ENSKMAG00000002417 SLC25A36 (ENSKMAG00000002380) #22 spsb4a (ENSKMAG00000002358) #23 ENSKMAG00000002334 CLSTN2 (ENSKMAG00000002240) #24 lpar5b (ENSKMAG00000002207) rbp2a (ENSKMAG00000002179) mrps22 (ENSKMAG00000002163) foxl2b (ENSKMAG00000002135) PIK3CB (ENSKMAG00000002028) PER2 (ENSKMAG00000001995) her13 (ENSKMAG00000001975) Turquoise killifish MODERN SPECIES 1085 SLC25A36 (ENSNFUG00015018450) #22 Ovalentaria_B ANCESTRAL SPECIES 11 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Cichlidae ANCESTRAL SPECIES 33 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000162403 ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d.a.a.b ENSGT00950000183136.b.b.d.b ENSGT00950000183136.b.b.d.a.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 22 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000162403 ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d.a.a.a ENSGT00950000183136.b.b.d.a.a.b.b ENSGT00950000183136.b.b.d.a.a.b.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 25 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000162403 ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d.a.a.a ENSGT00950000183136.b.b.d.a.a.b.b ENSGT00950000183136.b.b.d.a.a.b.a Haplochromini ANCESTRAL SPECIES 35 ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT01100000263520.a.b.a.a.a.b.a.b.c.d.a.a.a ENSGT00940000154907.a.a.x.b ENSGT00970000193449 ENSGT00950000183014.f.a ENSGT00940000162403 ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d.a.a.a.a.a ENSGT00950000183136.b.b.d.a.a.a.a.b ENSGT00950000183136.b.b.d.a.a.a.b Burton s mouthbrooder MODERN SPECIES 349 kcne4 (ENSHBUG00000022240) ENSHBUG00000022286 ENSHBUG00000022296 farsb (ENSHBUG00000022379) SGPP2 (ENSHBUG00000022394) ENSHBUG00000022407 pax3b (ENSHBUG00000022451) epha4a (ENSHBUG00000022511) pxylp1 (ENSHBUG00000022527) SLC25A36 (ENSHBUG00000022561) #22 spsb4a (ENSHBUG00000022597) #23 ENSHBUG00000022617 CLSTN2 (ENSHBUG00000022673) #24 lpar5b (ENSHBUG00000022688) rbp2a (ENSHBUG00000022702) COPB2 (ENSHBUG00000022803) mrps22 (ENSHBUG00000022826) PIK3CB (ENSHBUG00000023142) PER2 (ENSHBUG00000000709) her13 (ENSHBUG00000023176) her8.2 (ENSHBUG00000023184) ENSHBUG00000023216 ITM2C (ENSHBUG00000023261) lpar5b (ENSHBUG00000023274) lpar5b (ENSHBUG00000023292) Haplochromini_A ANCESTRAL SPECIES 40 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d.a.a.a.a.a ENSGT00950000183136.b.b.d.a.a.b.a ENSGT00950000183136.b.b.d.b P. nyererei MODERN SPECIES 378 wdfy1 (ENSPNYG00000011057) dhrs12la (ENSPNYG00000011099) AP1S3 (ENSPNYG00000011149) ENSPNYG00000011372 kcne4 (ENSPNYG00000011382) acsl3a (ENSPNYG00000011402) farsb (ENSPNYG00000011433) ENSPNYG00000011468 ENSPNYG00000011481 SGPP2 (ENSPNYG00000011492) ENSPNYG00000011511 pax3b (ENSPNYG00000011527) ENSPNYG00000011554 epha4a (ENSPNYG00000011571) pxylp1 (ENSPNYG00000011653) SLC25A36 (ENSPNYG00000011731) #22 spsb4a (ENSPNYG00000011766) #23 CLSTN2 (ENSPNYG00000011806) #24 lpar5b (ENSPNYG00000011904) rbp2a (ENSPNYG00000011924) COPB2 (ENSPNYG00000011944) mrps22 (ENSPNYG00000011985) foxl2b (ENSPNYG00000012072) PIK3CB (ENSPNYG00000012104) PER2 (ENSPNYG00000012204) her13 (ENSPNYG00000012240) her8.2 (ENSPNYG00000012263) ENSPNYG00000012316 ITM2C (ENSPNYG00000012355) lpar5b (ENSPNYG00000012388) Haplochromini_B ANCESTRAL SPECIES 9 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d.a.a.a.a.a ENSGT00950000183136.b.b.d.a.a.b.a ENSGT00950000183136.b.b.d.b.a.a Eastern happy MODERN SPECIES 5 dhrs12la (ENSACLG00000014210) ENSACLG00000014191 AP1S3 (ENSACLG00000014183) kcne4 (ENSACLG00000014128) acsl3a (ENSACLG00000014060) ENSACLG00000014051 farsb (ENSACLG00000013951) SGPP2 (ENSACLG00000013928) ENSACLG00000013923 pax3b (ENSACLG00000013881) ENSACLG00000013809 epha4a (ENSACLG00000013751) ENSACLG00000013740 ENSACLG00000013580 pxylp1 (ENSACLG00000013559) SLC25A36 (ENSACLG00000013526) #22 spsb4a (ENSACLG00000013515) #23 ENSACLG00000013213 ENSACLG00000013208 ENSACLG00000013193 CLSTN2 (ENSACLG00000013110) #24 lpar5b (ENSACLG00000012853) rbp2a (ENSACLG00000012843) COPB2 (ENSACLG00000012761) mrps22 (ENSACLG00000012727) PIK3CB (ENSACLG00000012502) PER2 (ENSACLG00000012344) her13 (ENSACLG00000012297) her8.2 (ENSACLG00000012275) ENSACLG00000012262 ITM2C (ENSACLG00000012210) Zebra mbuna MODERN SPECIES 1096 ENSMZEG00005004351 gemin4 (ENSMZEG00005004438) TLCD3A (ENSMZEG00005004444) usp2a (ENSMZEG00005004453) TBCEL (ENSMZEG00005004478) kcne4 (ENSMZEG00005004495) ENSMZEG00005004509 farsb (ENSMZEG00005004544) ENSMZEG00005004588 ENSMZEG00005004594 SGPP2 (ENSMZEG00005004600) ENSMZEG00005004622 pax3b (ENSMZEG00005004628) epha4a (ENSMZEG00005004684) pxylp1 (ENSMZEG00005004789) SLC25A36 (ENSMZEG00005004803) #22 spsb4a (ENSMZEG00005004837) #23 ENSMZEG00005004855 CLSTN2 (ENSMZEG00005004867) #24 ENSMZEG00005004907 rbp2a (ENSMZEG00005004916) COPB2 (ENSMZEG00005004942) mrps22 (ENSMZEG00005005002) foxl2a (ENSMZEG00005005026) nop53 (ENSMZEG00005005033) ENSMZEG00005005051 ENSMZEG00005005059 psma6l (ENSMZEG00005005071) ENSMZEG00005005107 sars2 (ENSMZEG00005005189) si:dkey-260j18.2 (ENSMZEG00005005293) Lyretail cichlid MODERN SPECIES 367 prss16 (ENSNBRG00000003861) serpine2 (ENSNBRG00000003846) wdfy1 (ENSNBRG00000003804) AP1S3 (ENSNBRG00000003658) ENSNBRG00000003634 kcne4 (ENSNBRG00000003631) acsl3a (ENSNBRG00000003327) ENSNBRG00000003270 farsb (ENSNBRG00000003198) SGPP2 (ENSNBRG00000003149) ENSNBRG00000003132 pax3b (ENSNBRG00000003096) epha4a (ENSNBRG00000003033) pxylp1 (ENSNBRG00000002984) ENSNBRG00000002963 SLC25A36 (ENSNBRG00000002942) #22 CLSTN2 (ENSNBRG00000002891) #24 lpar5b (ENSNBRG00000002874) rbp2a (ENSNBRG00000002854) COPB2 (ENSNBRG00000002788) mrps22 (ENSNBRG00000002593) PIK3CB (ENSNBRG00000002386) PER2 (ENSNBRG00000002361) her13 (ENSNBRG00000002345) her8.2 (ENSNBRG00000002319) ENSNBRG00000002297 ITM2C (ENSNBRG00000002259) lpar5b (ENSNBRG00000002226) lpar5b (ENSNBRG00000002212) ENSNBRG00000002192 meis3 (ENSNBRG00000002156) Nile tilapia MODERN SPECIES 5 psmd2 (ENSONIG00000010770) prss16 (ENSONIG00000010768) serpine2 (ENSONIG00000010765) wdfy1 (ENSONIG00000014648) dhrs12la (ENSONIG00000014649) ENSONIG00000014647 kcne4 (ENSONIG00000014646) acsl3a (ENSONIG00000014644) farsb (ENSONIG00000014639) ENSONIG00000036757 SGPP2 (ENSONIG00000014638) ENSONIG00000037185 pax3b (ENSONIG00000014632) epha4a (ENSONIG00000014623) pxylp1 (ENSONIG00000030369) SLC25A36 (ENSONIG00000014617) #22 spsb4a (ENSONIG00000014616) #23 CLSTN2 (ENSONIG00000014608) #24 ENSONIG00000034460 lpar5b (ENSONIG00000020974) rbp2a (ENSONIG00000014606) COPB2 (ENSONIG00000014597) mrps22 (ENSONIG00000014596) ENSONIG00000033377 PIK3CB (ENSONIG00000007924) PER2 (ENSONIG00000007937) ENSONIG00000039254 her13 (ENSONIG00000035460) her8.2 (ENSONIG00000007948) ENSONIG00000007949 ITM2C (ENSONIG00000007951) Midas cichlid MODERN SPECIES 1208 ENSACIG00000007678 SLC25A36 (ENSACIG00000007655) #22 spsb4a (ENSACIG00000007648) #23 CLSTN2 (ENSACIG00000007501) #24 Pomacentridae ANCESTRAL SPECIES 5 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Bicolor damselfish MODERN SPECIES 1489 pxylp1 (ENSSPAG00000017892) SLC25A36 (ENSSPAG00000017838) #22 spsb4a (ENSSPAG00000017828) #23 Pomacentridae_A ANCESTRAL SPECIES 4 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Amphiprion ANCESTRAL SPECIES 6 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00970000193381.a.a.a.a.b.b.a.b.f.a.a.a ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d.c ENSGT01040000240444.A.a.a.b Orange clownfish MODERN SPECIES 23 psmd2 (ENSAPEG00000001498) prss16 (ENSAPEG00000001482) serpine2 (ENSAPEG00000001453) wdfy1 (ENSAPEG00000001381) dhrs12la (ENSAPEG00000001325) SCG2 (ENSAPEG00000001314) AP1S3 (ENSAPEG00000001305) kcne4 (ENSAPEG00000001287) acsl3a (ENSAPEG00000001224) farsb (ENSAPEG00000001153) SGPP2 (ENSAPEG00000001108) ENSAPEG00000001098 pax3b (ENSAPEG00000001057) epha4a (ENSAPEG00000000975) pxylp1 (ENSAPEG00000000923) SLC25A36 (ENSAPEG00000000858) #22 spsb4a (ENSAPEG00000000845) #23 ENSAPEG00000000779 CLSTN2 (ENSAPEG00000000726) #24 lpar5b (ENSAPEG00000000689) rbp2a (ENSAPEG00000000675) ENSAPEG00000000653 COPB2 (ENSAPEG00000000555) mrps22 (ENSAPEG00000000548) PIK3CB (ENSAPEG00000000351) PER2 (ENSAPEG00000000330) her13 (ENSAPEG00000024634) her8.2 (ENSAPEG00000024633) ENSAPEG00000024631 ENSAPEG00000024629 ENSAPEG00000024627 Clown anemonefish MODERN SPECIES 2165 pxylp1 (ENSAOCG00000000768) SLC25A36 (ENSAOCG00000012499) #22 spsb4a (ENSAOCG00000012541) #23 SLC4A1AP (ENSAOCG00000012568) supt7l (ENSAOCG00000012589) Spiny chromis MODERN SPECIES 407 pxylp1 (ENSAPOG00000020055) SLC25A36 (ENSAPOG00000020029) #22 spsb4a (ENSAPOG00000019979) #23 Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Eupercaria ANCESTRAL SPECIES 7 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Tetraodontidae ANCESTRAL SPECIES 10 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00940000160165.a.a.a ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00940000160281 ENSGT00940000161057 ENSGT00940000154866.A Tetraodon MODERN SPECIES 8 psmd2 (ENSTNIG00000014301) prss16 (ENSTNIG00000014302) serpine2 (ENSTNIG00000014303) wdfy1 (ENSTNIG00000014304) dhrs12la (ENSTNIG00000014305) AP1S3 (ENSTNIG00000014306) ENSTNIG00000014307 kcne4 (ENSTNIG00000014308) acsl3a (ENSTNIG00000014309) farsb (ENSTNIG00000014310) eef1b2 (ENSTNIG00000014311) SGPP2 (ENSTNIG00000014312) pax3b (ENSTNIG00000014313) epha4a (ENSTNIG00000014314) pxylp1 (ENSTNIG00000014315) ENSTNIG00000014316 #22 spsb4a (ENSTNIG00000014317) #23 ENSTNIG00000014318 #24 lpar5b (ENSTNIG00000014319) RBP2 (ENSTNIG00000014320) foxl2b (ENSTNIG00000014321) PIK3CB (ENSTNIG00000014322) PER2 (ENSTNIG00000014323) her13 (ENSTNIG00000014324) her8.2 (ENSTNIG00000000385) ENSTNIG00000014325 ITM2C (ENSTNIG00000014326) ENSTNIG00000014327 ENSTNIG00000014328 GJD2 (ENSTNIG00000014329) ENSTNIG00000001535 Fugu MODERN SPECIES 2 prss16 (ENSTRUG00000010946) serpine2 (ENSTRUG00000010637) wdfy1 (ENSTRUG00000010333) dhrs12la (ENSTRUG00000010229) ENSTRUG00000031332 ENSTRUG00000025682 kcne4 (ENSTRUG00000010143) acsl3a (ENSTRUG00000009826) farsb (ENSTRUG00000009483) ENSTRUG00000021552 SGPP2 (ENSTRUG00000009369) ENSTRUG00000021876 pax3b (ENSTRUG00000009198) epha4a (ENSTRUG00000008442) pxylp1 (ENSTRUG00000020231) ENSTRUG00000008215 #22 spsb4a (ENSTRUG00000026889) #23 CLSTN2 (ENSTRUG00000030827) #24 ENSTRUG00000032783 lpar5b (ENSTRUG00000023839) rbp2a (ENSTRUG00000008045) mrps22 (ENSTRUG00000007940) PIK3CB (ENSTRUG00000007179) PER2 (ENSTRUG00000006817) her13 (ENSTRUG00000006688) her8.2 (ENSTRUG00000006663) ENSTRUG00000006438 ITM2C (ENSTRUG00000006075) ENSTRUG00000005924 ENSTRUG00000032831 meis3 (ENSTRUG00000000345) Eupecaria_A ANCESTRAL SPECIES 9 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Ballan wrasse MODERN SPECIES 93 ENSLBEG00000017884 kcne4 (ENSLBEG00000017894) acsl3a (ENSLBEG00000017932) ENSLBEG00000018008 ENSLBEG00000018031 sirt2 (ENSLBEG00000018065) farsb (ENSLBEG00000018127) ENSLBEG00000018194 SGPP2 (ENSLBEG00000018207) ENSLBEG00000018228 pax3b (ENSLBEG00000018254) epha4a (ENSLBEG00000018304) ENSLBEG00000018373 ENSLBEG00000018386 pxylp1 (ENSLBEG00000018402) SLC25A36 (ENSLBEG00000018438) #22 spsb4a (ENSLBEG00000018485) #23 CLSTN2 (ENSLBEG00000018525) #24 lpar5b (ENSLBEG00000018605) rbp2a (ENSLBEG00000018618) COPB2 (ENSLBEG00000018650) mrps22 (ENSLBEG00000018725) Eupecaria_B ANCESTRAL SPECIES 9 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Perciformes ANCESTRAL SPECIES 10 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Cottioidei ANCESTRAL SPECIES 4 ENSGT00940000177736 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00940000160281 ENSGT00940000161057 ENSGT00940000154866.A Lumpfish MODERN SPECIES 4 ENSCLMG00005013019 ENSCLMG00005013017 psmd2 (ENSCLMG00005010698) prss16 (ENSCLMG00005010668) serpine2 (ENSCLMG00005010667) dhrs12la (ENSCLMG00005010665) wdfy1 (ENSCLMG00005010662) ENSCLMG00005010642 kcne4 (ENSCLMG00005010641) acsl3a (ENSCLMG00005010121) farsb (ENSCLMG00005010117) SGPP2 (ENSCLMG00005010114) ENSCLMG00005010110 pax3b (ENSCLMG00005010108) pxylp1 (ENSCLMG00005010107) SLC25A36 (ENSCLMG00005010096) #22 spsb4a (ENSCLMG00005010095) #23 lpar5b (ENSCLMG00005010094) ENSCLMG00005010093 CLSTN2 (ENSCLMG00005010091) #24 rbp2a (ENSCLMG00005010090) COPB2 (ENSCLMG00005010088) mrps22 (ENSCLMG00005010084) PIK3CB (ENSCLMG00005008841) ENSCLMG00005008838 her13 (ENSCLMG00005008837) her8.2 (ENSCLMG00005008835) ENSCLMG00005008834 ITM2C (ENSCLMG00005008833) ENSCLMG00005008832 meis3 (ENSCLMG00005008829) Stickleback MODERN SPECIES dhrs13b.2 (ENSGACG00000005366) smtnl (ENSGACG00000005375) SEBOX (ENSGACG00000005381) tmem199 (ENSGACG00000005384) poldip2 (ENSGACG00000005396) LRRC75A (ENSGACG00000005426) crk (ENSGACG00000005430) ywhae1 (ENSGACG00000005434) myo1cb (ENSGACG00000005438) SLC43A2 (ENSGACG00000005457) pitpnaa (ENSGACG00000005469) inpp5ka (ENSGACG00000005511) ECEL1 (ENSGACG00000005523) zgc:153039 (ENSGACG00000005540) ENSGACG00000005551 SLC25A36 (ENSGACG00000005559) #22 CLSTN2 (ENSGACG00000005585) #24 lpar5b (ENSGACG00000005595) rbp2a (ENSGACG00000005598) COPB2 (ENSGACG00000005621) mrps22 (ENSGACG00000005634) foxl2b (ENSGACG00000005639) PIK3CB (ENSGACG00000005645) ENSGACG00000005662 HES6 (ENSGACG00000005680) ENSGACG00000005684 ENSGACG00000005715 ENSGACG00000005721 ENSGACG00000005725 meis3 (ENSGACG00000005732) ENSGACG00000005744 Perciformes_a ANCESTRAL SPECIES 9 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Pike perch MODERN SPECIES 60 psmd2 (ENSSLUG00000024595) prss16 (ENSSLUG00000024507) serpine2 (ENSSLUG00000024504) dhrs12la (ENSSLUG00000024461) wdfy1 (ENSSLUG00000024451) ENSSLUG00000024445 kcne4 (ENSSLUG00000024444) acsl3a (ENSSLUG00000023868) ENSSLUG00000023744 farsb (ENSSLUG00000023706) SGPP2 (ENSSLUG00000023690) ENSSLUG00000023684 pax3b (ENSSLUG00000023671) epha4a (ENSSLUG00000023403) pxylp1 (ENSSLUG00000023371) SLC25A36 (ENSSLUG00000023361) #22 spsb4a (ENSSLUG00000023357) #23 CLSTN2 (ENSSLUG00000023266) #24 lpar5b (ENSSLUG00000023242) rbp2a (ENSSLUG00000023238) COPB2 (ENSSLUG00000023150) mrps22 (ENSSLUG00000023133) PIK3CB (ENSSLUG00000022808) PER2 (ENSSLUG00000022765) her13 (ENSSLUG00000022759) her8.2 (ENSSLUG00000022756) ENSSLUG00000022753 ENSSLUG00000022750 ITM2C (ENSSLUG00000022743) lpar5b (ENSSLUG00000022740) ENSSLUG00000022736 Channel bull blenny MODERN SPECIES 4 ENSCGOG00000006008 ENSCGOG00000006009 wdfy1 (ENSCGOG00000006020) dhrs12la (ENSCGOG00000006280) ENSCGOG00000006349 kcne4 (ENSCGOG00000006352) acsl3a (ENSCGOG00000006366) farsb (ENSCGOG00000006513) ENSCGOG00000007342 SGPP2 (ENSCGOG00000007343) ENSCGOG00000007347 pax3b (ENSCGOG00000007355) ENSCGOG00000007483 epha4a (ENSCGOG00000007497) pxylp1 (ENSCGOG00000008533) SLC25A36 (ENSCGOG00000008534) #22 spsb4a (ENSCGOG00000008585) #23 CLSTN2 (ENSCGOG00000008630) #24 ENSCGOG00000009663 mrps22 (ENSCGOG00000009668) PIK3CB (ENSCGOG00000009836) her13 (ENSCGOG00000011185) her8.2 (ENSCGOG00000011188) ENSCGOG00000011193 ITM2C (ENSCGOG00000011325) ENSCGOG00000011328 ENSCGOG00000011330 meis3 (ENSCGOG00000011355) ENSCGOG00000011934 sirt2 (ENSCGOG00000011964) dmac2 (ENSCGOG00000012677) Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Eupercaria_incertae_sedis ANCESTRAL SPECIES 5 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00940000160281 ENSGT00940000161057 ENSGT00940000154866.A European seabass MODERN SPECIES 3 ENSDLAG00005015478 ENSDLAG00005013752 prss16 (ENSDLAG00005015483) serpine2 (ENSDLAG00005015524) wdfy1 (ENSDLAG00005015649) dhrs12la (ENSDLAG00005015755) ENSDLAG00005015875 acsl3a (ENSDLAG00005015895) farsb (ENSDLAG00005016391) ENSDLAG00005016506 SGPP2 (ENSDLAG00005016513) ENSDLAG00005032104 pax3b (ENSDLAG00005016542) EPHA4 (ENSDLAG00005017247) pxylp1 (ENSDLAG00005019541) ENSDLAG00005019555 #22 ENSDLAG00005034208 ENSDLAG00005028083 ENSDLAG00005019584 #23 ENSDLAG00005019627 #24 ENSDLAG00005029656 ENSDLAG00005029788 RBP2 (ENSDLAG00005026550) COPB2 (ENSDLAG00005020529) mrps22 (ENSDLAG00005020753) foxl2 (ENSDLAG00005034171) PIK3CB (ENSDLAG00005020770) ENSDLAG00005020824 ENSDLAG00005020871 ENSDLAG00005020875 ENSDLAG00005020882 Large yellow croaker MODERN SPECIES 479 pnkp (ENSLCRG00005017710) ENSLCRG00005017698 #21 ENSLCRG00005017694 #21 dhrs12la (ENSLCRG00005017536) wdfy1 (ENSLCRG00005017521) ENSLCRG00005017520 kcne4 (ENSLCRG00005017519) acsl3a (ENSLCRG00005016039) ENSLCRG00005016024 farsb (ENSLCRG00005015824) SGPP2 (ENSLCRG00005015823) ENSLCRG00005015822 pax3b (ENSLCRG00005015806) epha4a (ENSLCRG00005014647) pxylp1 (ENSLCRG00005014645) SLC25A36 (ENSLCRG00005014644) #22 spsb4a (ENSLCRG00005014643) #23 CLSTN2 (ENSLCRG00005014635) #24 lpar5b (ENSLCRG00005014634) rbp2a (ENSLCRG00005014633) COPB2 (ENSLCRG00005014204) mrps22 (ENSLCRG00005014181) PIK3CB (ENSLCRG00005011368) PER2 (ENSLCRG00005011302) HES6 (ENSLCRG00005011299) her8.2 (ENSLCRG00005011297) ENSLCRG00005011293 ITM2C (ENSLCRG00005011291) lpar5b (ENSLCRG00005011289) ENSLCRG00005011287 ENSLCRG00005011285 Gilthead seabream MODERN SPECIES 11 psmd2 (ENSSAUG00010020121) prss16 (ENSSAUG00010020022) serpine2 (ENSSAUG00010020016) dhrs12la (ENSSAUG00010019998) wdfy1 (ENSSAUG00010019952) ENSSAUG00010019944 kcne4 (ENSSAUG00010019943) acsl3a (ENSSAUG00010019839) ENSSAUG00010019835 farsb (ENSSAUG00010019829) SGPP2 (ENSSAUG00010019825) ENSSAUG00010019823 pax3b (ENSSAUG00010019792) epha4a (ENSSAUG00010016809) pxylp1 (ENSSAUG00010016785) SLC25A36 (ENSSAUG00010016782) #22 spsb4a (ENSSAUG00010016778) #23 CLSTN2 (ENSSAUG00010014662) #24 lpar5b (ENSSAUG00010014631) rbp2a (ENSSAUG00010014627) COPB2 (ENSSAUG00010012728) mrps22 (ENSSAUG00010012665) PIK3CB (ENSSAUG00010011008) PER2 (ENSSAUG00010010319) HES6 (ENSSAUG00010010304) her8.2 (ENSSAUG00010010303) ENSSAUG00010010300 ITM2C (ENSSAUG00010010296) lpar5b (ENSSAUG00010010292) lpar5b (ENSSAUG00010010291) lpar5b (ENSSAUG00010010288) Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Anabantaria ANCESTRAL SPECIES 9 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Zig-zag eel MODERN SPECIES 4 ENSMAMG00000011642 prss16 (ENSMAMG00000011675) serpine2 (ENSMAMG00000011683) wdfy1 (ENSMAMG00000011685) dhrs12la (ENSMAMG00000011712) ENSMAMG00000026117 kcne4 (ENSMAMG00000011787) acsl3a (ENSMAMG00000011800) farsb (ENSMAMG00000011835) ENSMAMG00000011897 SGPP2 (ENSMAMG00000011912) ENSMAMG00000011970 pax3b (ENSMAMG00000011978) EPHA4 (ENSMAMG00000012022) pxylp1 (ENSMAMG00000012120) ENSMAMG00000026348 #22 ENSMAMG00000012146 #23 ENSMAMG00000012176 #24 ENSMAMG00000024587 RBP2 (ENSMAMG00000012240) MRPS22 (ENSMAMG00000012264) ENSMAMG00000012296 ENSMAMG00000012347 ENSMAMG00000012374 ENSMAMG00000027547 ENSMAMG00000012469 ENSMAMG00000012502 ENSMAMG00000028330 meis3 (ENSMAMG00000012541) ENSMAMG00000026554 sirt2 (ENSMAMG00000012576) Anabantoidei ANCESTRAL SPECIES 14 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Siamese fighting fish MODERN SPECIES 4 prss16 (ENSBSLG00000020948) serpine2 (ENSBSLG00000020585) wdfy1 (ENSBSLG00000020575) dhrs12la (ENSBSLG00000020564) ENSBSLG00000020560 kcne4 (ENSBSLG00000020558) acsl3a (ENSBSLG00000019665) ENSBSLG00000019622 farsb (ENSBSLG00000019456) SGPP2 (ENSBSLG00000019393) ENSBSLG00000019391 pax3b (ENSBSLG00000019381) epha4a (ENSBSLG00000018927) pxylp1 (ENSBSLG00000018811) ENSBSLG00000018797 SLC25A36 (ENSBSLG00000018769) #22 spsb4a (ENSBSLG00000018738) #23 CLSTN2 (ENSBSLG00000016943) #24 rbp2a (ENSBSLG00000015872) COPB2 (ENSBSLG00000015276) mrps22 (ENSBSLG00000015161) PIK3CB (ENSBSLG00000013020) ENSBSLG00000012891 her13 (ENSBSLG00000012880) ENSBSLG00000012856 ITM2C (ENSBSLG00000012845) ENSBSLG00000012841 ENSBSLG00000012832 meis3 (ENSBSLG00000012619) ENSBSLG00000012579 sirt2 (ENSBSLG00000012322) Climbing perch MODERN SPECIES 4 ENSATEG00000020752 ENSATEG00000020821 ENSATEG00000020911 prss16 (ENSATEG00000020982) serpine2 (ENSATEG00000020995) wdfy1 (ENSATEG00000021008) dhrs12la (ENSATEG00000021047) ENSATEG00000021367 kcne4 (ENSATEG00000021395) acsl3a (ENSATEG00000021403) farsb (ENSATEG00000021441) SGPP2 (ENSATEG00000021475) pax3b (ENSATEG00000021488) EPHA4 (ENSATEG00000021519) pxylp1 (ENSATEG00000021551) ENSATEG00000021568 #22 ENSATEG00000021585 #23 ENSATEG00000021594 #24 ENSATEG00000021614 ENSATEG00000026860 RBP2 (ENSATEG00000021618) COPB2 (ENSATEG00000021631) MRPS22 (ENSATEG00000021646) PIK3CB (ENSATEG00000021657) ENSATEG00000021691 ENSATEG00000021709 ENSATEG00000025611 ENSATEG00000021754 ITM2C (ENSATEG00000021766) ENSATEG00000021777 ENSATEG00000021783 Carangaria ANCESTRAL SPECIES 8 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Carangaria_A ANCESTRAL SPECIES 37 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Seriola ANCESTRAL SPECIES 51 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Yellowtail amberjack MODERN SPECIES 3091 pxylp1 (ENSSLDG00000025042) SLC25A36 (ENSSLDG00000025033) #22 spsb4a (ENSSLDG00000025027) #23 CLSTN2 (ENSSLDG00000025020) #24 lpar5b (ENSSLDG00000025014) rbp2a (ENSSLDG00000025008) COPB2 (ENSSLDG00000024979) mrps22 (ENSSLDG00000024969) PIK3CB (ENSSLDG00000024911) ENSSLDG00000024851 HES6 (ENSSLDG00000024834) her8.2 (ENSSLDG00000024823) ENSSLDG00000024805 ITM2C (ENSSLDG00000024796) lpar5b (ENSSLDG00000024790) ENSSLDG00000024786 Greater amberjack MODERN SPECIES 114 serpine2 (ENSSDUG00000009476) wdfy1 (ENSSDUG00000009505) dhrs12la (ENSSDUG00000009540) AP1S3 (ENSSDUG00000009569) ENSSDUG00000009583 kcne4 (ENSSDUG00000009590) acsl3a (ENSSDUG00000009608) farsb (ENSSDUG00000009685) ENSSDUG00000009771 SGPP2 (ENSSDUG00000009776) ENSSDUG00000009793 pax3b (ENSSDUG00000009804) epha4a (ENSSDUG00000009839) ENSSDUG00000009883 pxylp1 (ENSSDUG00000009897) SLC25A36 (ENSSDUG00000009920) #22 spsb4a (ENSSDUG00000009950) #23 CLSTN2 (ENSSDUG00000009967) #24 lpar5b (ENSSDUG00000010000) rbp2a (ENSSDUG00000010022) COPB2 (ENSSDUG00000010056) mrps22 (ENSSDUG00000010135) foxl2b (ENSSDUG00000010149) PIK3CB (ENSSDUG00000010182) PER2 (ENSSDUG00000010286) HES6 (ENSSDUG00000010317) her8.2 (ENSSDUG00000010328) ENSSDUG00000010338 ITM2C (ENSSDUG00000010370) lpar5b (ENSSDUG00000010411) ENSSDUG00000010420 Barramundi perch MODERN SPECIES 124 psmd2 (ENSLCAG00010002522) prss16 (ENSLCAG00010002731) serpine2 (ENSLCAG00010002733) wdfy1 (ENSLCAG00010002740) dhrs12la (ENSLCAG00010002752) ENSLCAG00010002758 kcne4 (ENSLCAG00010002760) acsl3a (ENSLCAG00010002837) farsb (ENSLCAG00010003414) ENSLCAG00010003460 SGPP2 (ENSLCAG00010003464) ENSLCAG00010003467 pax3b (ENSLCAG00010003474) epha4a (ENSLCAG00010003599) pxylp1 (ENSLCAG00010004187) SLC25A36 (ENSLCAG00010004194) #22 spsb4a (ENSLCAG00010004206) #23 CLSTN2 (ENSLCAG00010004213) #24 lpar5b (ENSLCAG00010004216) rbp2a (ENSLCAG00010004218) COPB2 (ENSLCAG00010004245) mrps22 (ENSLCAG00010004320) PIK3CB (ENSLCAG00010004460) ENSLCAG00010004908 HES6 (ENSLCAG00010005146) her8.2 (ENSLCAG00010005153) myo7aa (ENSLCAG00010005254) ENSLCAG00010005772 Pleuronectoidei ANCESTRAL SPECIES 13 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183136.b.b.d ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00940000160281 ENSGT00940000161057 ENSGT00940000154866.A Tongue sole MODERN SPECIES 14 bcl9l (ENSCSEG00000006896) ENSCSEG00000006875 TREH (ENSCSEG00000006851) ENSCSEG00000006846 FBXO40 (ENSCSEG00000006833) ttc36 (ENSCSEG00000006840) NECTIN1 (ENSCSEG00000006820) ENSCSEG00000006815 trpc6a (ENSCSEG00000006802) pgr (ENSCSEG00000006795) ENSCSEG00000006789 ARHGAP42 (ENSCSEG00000006717) cntn5 (ENSCSEG00000006697) epha4a (ENSCSEG00000006677) pxylp1 (ENSCSEG00000006664) SLC25A36 (ENSCSEG00000006649) #22 spsb4a (ENSCSEG00000006639) #23 panx1a (ENSCSEG00000006624) ENSCSEG00000006620 clns1a (ENSCSEG00000006611) aqp11 (ENSCSEG00000006605) pak1 (ENSCSEG00000006576) GDPD4 (ENSCSEG00000006568) myo7aa (ENSCSEG00000006533) ompa (ENSCSEG00000006525) CAPN5 (ENSCSEG00000006517) dcun1d5 (ENSCSEG00000006513) CUL5 (ENSCSEG00000006499) SLC35F2 (ENSCSEG00000006494) flot2b (ENSCSEG00000006488) FAM222B (ENSCSEG00000006481) Turbot MODERN SPECIES 15 ENSSMAG00000020563 ENSSMAG00000020589 prss16 (ENSSMAG00000020598) serpine2 (ENSSMAG00000020601) wdfy1 (ENSSMAG00000020603) dhrs12la (ENSSMAG00000020608) ENSSMAG00000020660 kcne4 (ENSSMAG00000020661) acsl3a (ENSSMAG00000020663) farsb (ENSSMAG00000020668) ENSSMAG00000020677 SGPP2 (ENSSMAG00000020680) ENSSMAG00000020682 pax3b (ENSSMAG00000020683) EPHA4 (ENSSMAG00000020688) ENSSMAG00000020692 #22 pxylp1 (ENSSMAG00000020689) ENSSMAG00000020694 #23 ENSSMAG00000027874 ENSSMAG00000020698 #24 ENSSMAG00000020702 RBP2 (ENSSMAG00000025467) COPB2 (ENSSMAG00000020707) MRPS22 (ENSSMAG00000020714) PIK3CB (ENSSMAG00000000112) ENSSMAG00000000129 ENSSMAG00000029620 ENSSMAG00000000161 ENSSMAG00000000166 ENSSMAG00000000194 ENSSMAG00000000173 Tiger tail seahorse MODERN SPECIES 517 wdfy1 (ENSHCOG00000016262) dhrs12la (ENSHCOG00000016289) AP1S3 (ENSHCOG00000016296) ENSHCOG00000016302 kcne4 (ENSHCOG00000016311) ENSHCOG00000016330 acsl3a (ENSHCOG00000016430) farsb (ENSHCOG00000016462) ENSHCOG00000016479 ENSHCOG00000016512 SGPP2 (ENSHCOG00000016537) ENSHCOG00000016554 pax3b (ENSHCOG00000016573) epha4a (ENSHCOG00000016610) pxylp1 (ENSHCOG00000016625) SLC25A36 (ENSHCOG00000016644) #22 spsb4a (ENSHCOG00000016659) #23 CLSTN2 (ENSHCOG00000016690) #24 rbp2a (ENSHCOG00000016710) mrps22 (ENSHCOG00000016713) foxl2b (ENSHCOG00000016718) PIK3CB (ENSHCOG00000016759) PER2 (ENSHCOG00000016767) her13 (ENSHCOG00000016789) her8.2 (ENSHCOG00000016804) ENSHCOG00000016829 ITM2C (ENSHCOG00000016875) meis3 (ENSHCOG00000016923) ENSHCOG00000016940 sirt2 (ENSHCOG00000016976) dmac2 (ENSHCOG00000017106) Pinecone sodierfish MODERN SPECIES 4 psmd2 (ENSMMDG00005019038) prss16 (ENSMMDG00005019100) serpine2 (ENSMMDG00005019108) wdfy1 (ENSMMDG00005019117) dhrs12la (ENSMMDG00005019127) ENSMMDG00005019130 kcne4 (ENSMMDG00005019132) acsl3a (ENSMMDG00005019162) farsb (ENSMMDG00005001237) ENSMMDG00005001539 SGPP2 (ENSMMDG00005001557) ENSMMDG00005001621 pax3b (ENSMMDG00005001645) epha4a (ENSMMDG00005001794) pxylp1 (ENSMMDG00005003638) SLC25A36 (ENSMMDG00005003650) #22 spsb4a (ENSMMDG00005003678) #23 CLSTN2 (ENSMMDG00005003696) #24 lpar5b (ENSMMDG00005003739) rbp2a (ENSMMDG00005003743) COPB2 (ENSMMDG00005003752) mrps22 (ENSMMDG00005003761) PIK3CB (ENSMMDG00005003879) ENSMMDG00005007371 her13 (ENSMMDG00005008258) her8.2 (ENSMMDG00005008260) ENSMMDG00005008264 ITM2C (ENSMMDG00005008270) lpar5b (ENSMMDG00005008271) ENSMMDG00005008273 ENSMMDG00005008275 Cod MODERN SPECIES 7 ENSGMOG00000034276 ENSGMOG00000008966 ENSGMOG00000029247 kcnj13 (ENSGMOG00000030777) ENSGMOG00000009010 ENSGMOG00000009019 tpst1 (ENSGMOG00000009059) tnfaip1 (ENSGMOG00000009025) ENSGMOG00000009038 aldh3a2a (ENSGMOG00000009087) ENSGMOG00000030909 ENSGMOG00000014227 ENSGMOG00000024699 ENSGMOG00000023021 pxylp1 (ENSGMOG00000025794) ENSGMOG00000001882 #22 ENSGMOG00000008804 #23 ENSGMOG00000008822 #24 ENSGMOG00000028813 ENSGMOG00000022668 RBP2 (ENSGMOG00000013916) COPB2 (ENSGMOG00000013927) MRPS22 (ENSGMOG00000013972) PIK3CB (ENSGMOG00000013996) ENSGMOG00000014046 ENSGMOG00000027451 ENSGMOG00000028584 ENSGMOG00000033018 ENSGMOG00000029526 ENSGMOG00000014166 ENSGMOG00000010627 Protacanthopterygii ANCESTRAL SPECIES 15 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00940000175263 ENSGT01030000235000 ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j.a ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.b #23 ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00940000160165.a ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b ENSGT01040000240444.A.b.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 588 ENSGT00390000016324.n.a ENSGT00940000154369.g.b.a #22 ENSGT01030000234629.C.b.a #23 ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a.b.b #24 ENSGT00950000183086.a.a.b.h.a.a #24 ENSGT00940000160165.a.c ENSGT00900000141083.c.b.c ENSGT00390000006095.d ENSGT00940000162075.db.b.a ENSGT00940000157522.d.b ENSGT00940000157522.d.a.b ENSGT00940000161398.e.a ENSGT00940000164578.a.a.a ENSGT00390000004360.a.a.b ENSGT00950000183115.a.a.a.b Huchen MODERN SPECIES 1548 pxylp1 (ENSHHUG00000036325) SLC25A36 (ENSHHUG00000036314) #22 spsb4a (ENSHHUG00000036312) #23 ENSHHUG00000036301 #24 Salmoninae_a ANCESTRAL SPECIES 3 ENSGT00940000164087 ENSGT00940000158424.c ENSGT00940000157731.e.a ENSGT00940000165979.a ENSGT00940000157731.f.a ENSGT00390000010895.a.a ENSGT00390000013776.d ENSGT00940000155954.b.a ENSGT01030000234582.e.a.wc.b ENSGT00530000063489.a.c ENSGT00940000159500.j ENSGT00940000166595.b.d ENSGT00940000156504.i.a.f ENSGT00940000156948.j.a.b ENSGT00390000016324.m.a ENSGT00940000154369.g.b.a #22 ENSGT01030000234629.C.b.a #23 ENSGT00530000064220.a ENSGT00950000183086.a.a.b.h.a.a #24 ENSGT00940000160165.a.c ENSGT00900000141083.c.b.c ENSGT00390000006095.d ENSGT00940000162075.db.b.a ENSGT00940000157522.d.b ENSGT00940000161398.e.a ENSGT00940000164578.a.a.a ENSGT00390000004360.a.a.b ENSGT00950000183115.a.a.a.b ENSGT00950000183136.b.b.i.b ENSGT01040000240444.A.b.b.e.b ENSGT01030000234571.b.b.a.a.a.b Oncorhynchus ANCESTRAL SPECIES 14 ENSGT00940000153386.B.i ENSGT00940000164087 ENSGT00940000158424.c ENSGT00940000165979.a ENSGT00940000157731.f.a ENSGT00390000010895.a.a ENSGT00390000013776.d ENSGT00940000155954.b.a ENSGT01030000234582.e.a.wc.b ENSGT00530000063489.a.c ENSGT00940000159500.j ENSGT00940000166595.b.d ENSGT00940000156504.i.a.f ENSGT00940000156948.j.a.b ENSGT00390000016324.m.a ENSGT00940000154369.g.b.a #22 ENSGT01030000234629.C.b.a #23 ENSGT00530000064220.a ENSGT00950000183086.a.a.b.h.a.a #24 ENSGT00940000160165.a.c ENSGT00900000141083.c.b.c ENSGT00940000157522.d.a.a ENSGT00940000161398.e.a ENSGT00940000164578.a.a.a ENSGT00390000004360.a.a.b ENSGT00950000183115.a.a.a.b ENSGT00950000183136.b.b.i.b ENSGT01040000240444.A.b.b.e.b ENSGT01030000234571.b.b.a.a.a.b ENSGT00390000012058.c.a.d ENSGT00990000203615.b.a.b.f Oncorhynchus_a ANCESTRAL SPECIES 32 ENSGT00940000153386.B.i ENSGT00940000164087.e ENSGT00940000158424.c ENSGT00940000165979.a ENSGT00940000157731.f.a ENSGT00390000010895.a.a ENSGT00390000013776.d ENSGT00940000155954.b.a ENSGT01030000234582.e.a.wc.b ENSGT00530000063489.a.c ENSGT00940000159500.j ENSGT00940000166595.b.d ENSGT00940000156504.i.a.f ENSGT00940000156948.j.a.b ENSGT00390000016324.m.a ENSGT00940000154369.g.b.a #22 ENSGT01030000234629.C.b.a #23 ENSGT00530000064220.a ENSGT00950000183086.a.a.b.h.a.a #24 ENSGT00940000160165.a.c ENSGT00900000141083.c.b.c ENSGT00940000157522.d.a.a ENSGT00940000161398.e.a ENSGT00940000164578.a.a.a ENSGT00390000004360.a.a.b ENSGT00950000183115.a.a.a.b ENSGT00950000183136.b.b.i.b ENSGT01040000240444.A.b.b.e.b ENSGT01030000234571.b.b.a.a.a.b ENSGT00390000012058.c.a.d ENSGT00990000203615.b.a.b.f Coho salmon MODERN SPECIES 6 prss16 (ENSOKIG00005033142) serpine2 (ENSOKIG00005033223) wdfy1 (ENSOKIG00005033259) dhrs12la (ENSOKIG00005033327) ENSOKIG00005033654 kcne4 (ENSOKIG00005033667) acsl3a (ENSOKIG00005033681) ENSOKIG00005033822 MOGAT1 (ENSOKIG00005033840) farsb (ENSOKIG00005033852) SGPP2 (ENSOKIG00005033954) ENSOKIG00005033983 pax3b (ENSOKIG00005033994) EPHA4 (ENSOKIG00005034081) pxylp1 (ENSOKIG00005034194) SLC25A36 (ENSOKIG00005034220) #22 spsb4a (ENSOKIG00005034305) #23 ENSOKIG00005034314 CLSTN2 (ENSOKIG00005034370) #24 RBP2 (ENSOKIG00005034789) ENSOKIG00005034810 COPB2 (ENSOKIG00005034824) ENSOKIG00005034947 ENSOKIG00005034995 ENSOKIG00005035105 PIK3CB (ENSOKIG00005035228) her13 (ENSOKIG00005036977) her8.2 (ENSOKIG00005036998) ENSOKIG00005037011 ITM2C (ENSOKIG00005037042) lpar5b (ENSOKIG00005037066) Chinook salmon MODERN SPECIES 4 smc4 (ENSOTSG00005033673) ENSOTSG00005033659 ENSOTSG00005033658 HES6 (ENSOTSG00005033657) her8.2 (ENSOTSG00005033653) ENSOTSG00005033646 ITM2C (ENSOTSG00005033643) lpar5b (ENSOTSG00005033642) gpr55a (ENSOTSG00005033641) NGEF (ENSOTSG00005033262) efhd1 (ENSOTSG00005033260) kcnj13 (ENSOTSG00005033259) GAL3ST2 (ENSOTSG00005033258) dok1b (ENSOTSG00005033257) ENSOTSG00005033255 SLC25A36 (ENSOTSG00005033254) #22 spsb4a (ENSOTSG00005033252) #23 ENSOTSG00005033250 #24 ENSOTSG00005033247 ENSOTSG00005033242 chrd (ENSOTSG00005033240) alp3 (ENSOTSG00005037268) ENSOTSG00005037262 PSMD2 (ENSOTSG00005037069) prss16 (ENSOTSG00005037067) dhrs12la (ENSOTSG00005037066) wdfy1 (ENSOTSG00005036581) SCG2 (ENSOTSG00005036580) kcne4 (ENSOTSG00005036579) acsl3a (ENSOTSG00005036578) MOGAT1 (ENSOTSG00005036575) Rainbow trout MODERN SPECIES 19 wdfy1 (ENSOMYG00000041744) dhrs12la (ENSOMYG00000041779) ENSOMYG00000067981 ENSOMYG00000053039 kcne4 (ENSOMYG00000045256) acsl3a (ENSOMYG00000062951) MOGAT1 (ENSOMYG00000045261) farsb (ENSOMYG00000045269) ENSOMYG00000075686 ENSOMYG00000045286 SGPP2 (ENSOMYG00000045289) ENSOMYG00000045293 pax3b (ENSOMYG00000045319) EPHA4 (ENSOMYG00000045497) pxylp1 (ENSOMYG00000045548) ENSOMYG00000045536 #22 SPSB4 (ENSOMYG00000045534) #23 ENSOMYG00000045523 #24 ENSOMYG00000037636 ENSOMYG00000037604 ENSOMYG00000070221 ENSOMYG00000060003 ENSOMYG00000037526 ENSOMYG00000064208 ENSOMYG00000037470 ENSOMYG00000058394 ENSOMYG00000037364 ENSOMYG00000037359 ENSOMYG00000037347 ENSOMYG00000037339 lpar5b (ENSOMYG00000037327) Salmo ANCESTRAL SPECIES 7 ENSGT00940000164087 ENSGT00940000158424.c ENSGT00940000157731.e.a ENSGT00940000165979.a ENSGT00970000193372.b.a.b.a ENSGT00390000010895.a.a ENSGT00390000013776.d ENSGT00940000155954.b.a ENSGT01030000234582.e.a.wc.b ENSGT00530000063489.a.c ENSGT00940000159500.j ENSGT00940000166595.b.d ENSGT00940000156504.i.a.f ENSGT00940000156948.j.a.b ENSGT00390000016324.m.a ENSGT00940000154369.g.b.a #22 ENSGT01030000234629.C.b.a #23 ENSGT00950000183086.a.a.b.h.a.a #24 ENSGT00940000160165.a.c ENSGT00900000141083.c.b.c ENSGT00390000006095.d ENSGT00940000162075.db.b.a ENSGT00940000157522.d.b ENSGT00940000161398.e.a ENSGT00940000164578.a.a.a ENSGT00390000004360.a.a.b ENSGT00950000183115.a.a.a.b ENSGT00950000183136.b.b.i.b ENSGT01040000240444.A.b.b.e.b ENSGT01030000234571.b.b.a.a.a.b ENSGT00390000012058.c.a.d Atlantic salmon MODERN SPECIES 12 wdfy1 (ENSSSAG00000078262) dhrs12la (ENSSSAG00000078330) AP1S3 (ENSSSAG00000106401) ENSSSAG00000097433 kcne4 (ENSSSAG00000092694) acsl3a (ENSSSAG00000090701) MOGAT1 (ENSSSAG00000006217) farsb (ENSSSAG00000006297) SGPP2 (ENSSSAG00000006428) ENSSSAG00000087087 pax3b (ENSSSAG00000006484) EPHA4 (ENSSSAG00000006756) ENSSSAG00000096046 ENSSSAG00000111346 acpl2 (ENSSSAG00000067856) ENSSSAG00000068023 #22 ENSSSAG00000068016 #23 ENSSSAG00000111589 #24 ENSSSAG00000107920 COPB2 (ENSSSAG00000054694) mrps22 (ENSSSAG00000085488) ENSSSAG00000120199 PIK3CB (ENSSSAG00000044156) HES6 (ENSSSAG00000043968) ENSSSAG00000043963 ENSSSAG00000043918 ENSSSAG00000043844 gpr55a (ENSSSAG00000087199) ngef (ENSSSAG00000043373) ENSSSAG00000087441 ENSSSAG00000119253 River trout MODERN SPECIES 18 prss16 (ENSSTUG00000016559) serpine2 (ENSSTUG00000016576) wdfy1 (ENSSTUG00000016617) dhrs12la (ENSSTUG00000016709) SCG2 (ENSSTUG00000016849) kcne4 (ENSSTUG00000016852) acsl3a (ENSSTUG00000016868) ENSSTUG00000017223 ENSSTUG00000017231 farsb (ENSSTUG00000017360) ENSSTUG00000017986 ENSSTUG00000017993 pax3b (ENSSTUG00000018005) EPHA4 (ENSSTUG00000018120) pxylp1 (ENSSTUG00000018182) SLC25A36 (ENSSTUG00000018198) #22 spsb4a (ENSSTUG00000018223) #23 ENSSTUG00000018228 #24 RBP2 (ENSSTUG00000018242) COPB2 (ENSSTUG00000018264) ENSSTUG00000018500 mrps22 (ENSSTUG00000018509) ENSSTUG00000018557 PIK3CB (ENSSTUG00000018608) ENSSTUG00000019232 her13 (ENSSTUG00000019266) her8.2 (ENSSTUG00000019275) ENSSTUG00000019280 ITM2C (ENSSTUG00000019293) lpar5b (ENSSTUG00000019342) gpr55a (ENSSTUG00000019362) Salmoninae ANCESTRAL SPECIES 493 ENSGT00390000010895.a.b ENSGT00390000013776.c ENSGT00940000155954.b.b.a.a ENSGT01030000234582.e.a.wc.a ENSGT00530000063489.a.d ENSGT00940000159500.i ENSGT01030000234582.e.a.wc.b ENSGT00530000063489.a.c ENSGT00940000159500.j ENSGT00940000166595.b ENSGT00940000156504.i.a.f ENSGT00940000156948.j.a.b ENSGT00390000016324.m ENSGT00940000156504.i.a.e ENSGT00940000156948.j.a.a ENSGT00940000154369.g.b.b #22 ENSGT01030000234629.C.b.b #23 Huchen MODERN SPECIES 4417 SLC25A36 (ENSHHUG00000044269) #22 spsb4a (ENSHHUG00000044267) #23 Salmoninae_a ANCESTRAL SPECIES 56 ENSGT00940000158424.d ENSGT00940000157731.e.b ENSGT00940000165979.b ENSGT00940000157731.f.b ENSGT00390000010895.a.b ENSGT00390000013776.c ENSGT00940000155954.b.b.b ENSGT00940000155954.b.b.a.a ENSGT01030000234582.e.a.wc.a ENSGT00530000063489.a.d ENSGT00940000159500.i ENSGT00940000166595.b.c ENSGT00940000156504.i.a.e ENSGT00940000156948.j.a.a ENSGT00390000016324.m.b ENSGT00940000154369.g.b.b #22 ENSGT01030000234629.C.b.b #23 ENSGT00530000064220.b ENSGT00950000183086.a.a.b.h.a.b.b #24 ENSGT00940000160165.a.d ENSGT00900000141083.c.b.d ENSGT00390000006095.c ENSGT00940000162075.db.b.b ENSGT00940000157522.c ENSGT00940000161398.e.b ENSGT00940000164578.a.a.b ENSGT00390000004360.a.a.a ENSGT00950000183115.a.a.a.a ENSGT00950000183136.b.b.i.a ENSGT01040000240444.A.b.b.e.a ENSGT01030000234571.b.b.a.a.a.a Oncorhynchus ANCESTRAL SPECIES 57 ENSGT00940000154648.a.b.b ENSGT00940000153386.B.j ENSGT00940000158424.d ENSGT00940000165979.b ENSGT00940000157731.f.b ENSGT00390000010895.a.b ENSGT00390000013776.c ENSGT00940000155954.b.b.b ENSGT01030000234582.e.a.wc.a ENSGT00530000063489.a.d ENSGT00940000159500.i ENSGT00940000166595.b.c ENSGT00940000156504.i.a.e ENSGT00940000156948.j.a.a ENSGT00390000016324.m.b ENSGT00940000154369.g.b.b #22 ENSGT01030000234629.C.b.b #23 ENSGT00530000064220.b ENSGT00950000183086.a.a.b.h.a.b.b #24 ENSGT00940000160165.a.d ENSGT00900000141083.c.b.d ENSGT00390000006095.c ENSGT00940000157522.c ENSGT00940000161398.e.b ENSGT00940000164578.a.a.b ENSGT00390000004360.a.a.a ENSGT00950000183115.a.a.a.a ENSGT01040000240444.A.b.b.e.a ENSGT01030000234571.b.b.a.a.a.a ENSGT00390000012058.c.a.c ENSGT00990000203615.b.a.b.e Rainbow trout MODERN SPECIES 16 serpine2 (ENSOMYG00000042953) wdfy1 (ENSOMYG00000042987) dhrs12la (ENSOMYG00000043025) ENSOMYG00000043148 ENSOMYG00000043153 acsl3a (ENSOMYG00000051839) MOGAT1 (ENSOMYG00000043158) farsb (ENSOMYG00000043179) SGPP2 (ENSOMYG00000043206) ENSOMYG00000043211 pax3b (ENSOMYG00000043216) EPHA4 (ENSOMYG00000043230) ENSOMYG00000068412 ENSOMYG00000055905 ENSOMYG00000043266 #23 ENSOMYG00000043294 #22 ENSOMYG00000043246 ENSOMYG00000043305 #24 rbp2a (ENSOMYG00000043708) COPB2 (ENSOMYG00000062074) MRPS22 (ENSOMYG00000043703) PIK3CB (ENSOMYG00000043608) ENSOMYG00000043546 ENSOMYG00000043536 ENSOMYG00000043529 gpr55a (ENSOMYG00000043522) ENSOMYG00000043509 efhd1 (ENSOMYG00000043478) kcnj13 (ENSOMYG00000043477) ENSOMYG00000064329 ENSOMYG00000071106 Oncorhynchus_a ANCESTRAL SPECIES 78 ENSGT00940000154648.a.b.b ENSGT00940000153386.B.j ENSGT00940000158424.d ENSGT00940000165979.b ENSGT00940000157731.f.b ENSGT00390000010895.a.b ENSGT00390000013776.c ENSGT00940000155954.b.b.b ENSGT01030000234582.e.a.wc.a ENSGT00530000063489.a.d ENSGT00940000159500.i ENSGT00940000166595.b.c ENSGT00940000156504.i.a.e ENSGT00940000156948.j.a.a ENSGT00390000016324.m.b ENSGT00940000154369.g.b.b #22 ENSGT01030000234629.C.b.b #23 ENSGT00530000064220.b ENSGT00950000183086.a.a.b.h.a.b.b #24 ENSGT00940000160165.a.d ENSGT00900000141083.c.b.d ENSGT00390000006095.c ENSGT00940000157522.c ENSGT00940000161398.e.b ENSGT00940000164578.a.a.b ENSGT00390000004360.a.a.a ENSGT00950000183115.a.a.a.a ENSGT01040000240444.A.b.b.e.a ENSGT01030000234571.b.b.a.a.a.a ENSGT00390000012058.c.a.c ENSGT00990000203615.b.a.b.e Coho salmon MODERN SPECIES 9 PSMD2 (ENSOKIG00005024834) SERPINE2 (ENSOKIG00005024649) dhrs12la (ENSOKIG00005024421) wdfy1 (ENSOKIG00005024308) SCG2 (ENSOKIG00005024280) ENSOKIG00005024276 kcne4 (ENSOKIG00005024271) acsl3a (ENSOKIG00005023041) MOGAT1 (ENSOKIG00005022988) farsb (ENSOKIG00005022847) SGPP2 (ENSOKIG00005022801) ENSOKIG00005022784 pax3b (ENSOKIG00005022662) EPHA4 (ENSOKIG00005021217) pxylp1 (ENSOKIG00005021145) SLC25A36 (ENSOKIG00005021117) #22 SPSB4 (ENSOKIG00005021110) #23 ENSOKIG00005021104 CLSTN2 (ENSOKIG00005020906) #24 rbp2a (ENSOKIG00005020847) COPB2 (ENSOKIG00005020802) mrps22 (ENSOKIG00005020794) PIK3CB (ENSOKIG00005019301) HES6 (ENSOKIG00005019217) ENSOKIG00005019210 ENSOKIG00005019198 ITM2C (ENSOKIG00005019191) gpr55a (ENSOKIG00005019189) ENSOKIG00005019083 efhd1 (ENSOKIG00005019062) kcnj13 (ENSOKIG00005019057) Chinook salmon MODERN SPECIES 5 COPB2 (ENSOTSG00005005339) mrps22 (ENSOTSG00005005336) PIK3CB (ENSOTSG00005005287) ENSOTSG00005005274 her8.2 (ENSOTSG00005005273) ENSOTSG00005005271 ITM2C (ENSOTSG00005005269) gpr55a (ENSOTSG00005005266) ENSOTSG00005004687 efhd1 (ENSOTSG00005004680) kcnj13 (ENSOTSG00005004678) GAL3ST2 (ENSOTSG00005004675) hnrnpr (ENSOTSG00005004663) SMCO4 (ENSOTSG00005004661) ENSOTSG00005004660 SLC25A36 (ENSOTSG00005004658) #22 spsb4a (ENSOTSG00005004657) #23 ENSOTSG00005004656 ENSOTSG00005004655 #24 EPHA4 (ENSOTSG00005004652) pax3b (ENSOTSG00005004639) ENSOTSG00005004637 ENSOTSG00005004636 ENSOTSG00005004635 SGPP2 (ENSOTSG00005004634) farsb (ENSOTSG00005004507) MOGAT1 (ENSOTSG00005004499) ENSOTSG00005004498 SCG2 (ENSOTSG00005004497) dhrs12la (ENSOTSG00005004480) wdfy1 (ENSOTSG00005004479) Salmo ANCESTRAL SPECIES 18 ENSGT00940000153386.B.j ENSGT00940000158424.d ENSGT00940000157731.e.b ENSGT00940000165979.b.a ENSGT00970000193372.b.a.b.b ENSGT00390000010895.a.b ENSGT00390000013776.c ENSGT00940000155954.b.b.a.a ENSGT01030000234582.e.a.wc.a ENSGT00530000063489.a.d ENSGT00940000159500.i ENSGT00940000166595.b.c ENSGT00940000156504.i.a.e ENSGT00940000156948.j.a.a ENSGT00390000016324.m.b ENSGT00940000154369.g.b.b #22 ENSGT01030000234629.C.b.b #23 ENSGT00530000064220.b ENSGT00950000183086.a.a.b.h.a.b.b #24 ENSGT00940000160165.a.d ENSGT00390000006095.c ENSGT00940000162075.db.b.b ENSGT00940000157522.c ENSGT00940000161398.e.b ENSGT00940000164578.a.a.b ENSGT00390000004360.a.a.a ENSGT00950000183115.a.a.a.a ENSGT00950000183136.b.b.i.a ENSGT01040000240444.A.b.b.e.a ENSGT01030000234571.b.b.a.a.a.a ENSGT00390000012058.c.a.c River trout MODERN SPECIES 4 PSMD2 (ENSSTUG00000003015) serpine2 (ENSSTUG00000004095) wdfy1 (ENSSTUG00000004442) dhrs12la (ENSSTUG00000004618) SCG2 (ENSSTUG00000004694) kcne4 (ENSSTUG00000004697) acsl3a (ENSSTUG00000004701) MOGAT1 (ENSSTUG00000004706) farsb (ENSSTUG00000004736) SGPP2 (ENSSTUG00000004993) ENSSTUG00000005010 pax3b (ENSSTUG00000005031) ENSSTUG00000005147 EPHA4 (ENSSTUG00000005206) pxylp1 (ENSSTUG00000006679) SLC25A36 (ENSSTUG00000006696) #22 spsb4a (ENSSTUG00000006771) #23 ENSSTUG00000006772 CLSTN2 (ENSSTUG00000006813) #24 rbp2a (ENSSTUG00000007216) mrps22 (ENSSTUG00000007231) ENSSTUG00000007276 ENSSTUG00000008129 HES6 (ENSSTUG00000008183) her8.2 (ENSSTUG00000008190) ENSSTUG00000008198 ITM2C (ENSSTUG00000008227) lpar5b (ENSSTUG00000008234) gpr55a (ENSSTUG00000008236) ENSSTUG00000008240 efhd1 (ENSSTUG00000008303) Atlantic salmon MODERN SPECIES 28 serpine2 (ENSSSAG00000046301) wdfy1 (ENSSSAG00000056785) dhrs12la (ENSSSAG00000057066) AP1S3 (ENSSSAG00000112646) ENSSSAG00000101506 kcne4 (ENSSSAG00000056752) acsl3a (ENSSSAG00000068061) mogt1 (ENSSSAG00000057167) farsb (ENSSSAG00000057206) SGPP2 (ENSSSAG00000057757) ENSSSAG00000103189 ENSSSAG00000120692 pax3b (ENSSSAG00000057843) EPHA4 (ENSSSAG00000092983) pxylp1 (ENSSSAG00000057141) ENSSSAG00000101149 #22 SPSB4 (ENSSSAG00000057105) #23 ENSSSAG00000057097 CLSTN2 (ENSSSAG00000057150) #24 ENSSSAG00000046286 mrps22 (ENSSSAG00000046262) ENSSSAG00000082803 ENSSSAG00000061272 HES6 (ENSSSAG00000061216) ENSSSAG00000088398 ENSSSAG00000061151 ITM2C (ENSSSAG00000061118) gpr55a (ENSSSAG00000120052) ENSSSAG00000060567 efhd1 (ENSSSAG00000060520) kcnj13 (ENSSSAG00000060505) Northern pike MODERN SPECIES ENSELUG00000015157 psmd2 (ENSELUG00000015058) prss16 (ENSELUG00000015027) serpine2 (ENSELUG00000015004) wdfy1 (ENSELUG00000014992) dhrs12la (ENSELUG00000014951) ENSELUG00000014895 kcne4 (ENSELUG00000014891) acsl3a (ENSELUG00000014878) farsb (ENSELUG00000014767) SGPP2 (ENSELUG00000014716) ENSELUG00000014710 pax3b (ENSELUG00000014699) EPHA4 (ENSELUG00000014650) pxylp1 (ENSELUG00000000536) SLC25A36 (ENSELUG00000014542) #22 spsb4a (ENSELUG00000014517) #23 ENSELUG00000033315 CLSTN2 (ENSELUG00000000534) #24 rbp2a (ENSELUG00000000526) COPB2 (ENSELUG00000014429) mrps22 (ENSELUG00000014349) PIK3CB (ENSELUG00000014140) PER2 (ENSELUG00000014096) her13 (ENSELUG00000014037) her8.2 (ENSELUG00000014014) ENSELUG00000014008 ITM2C (ENSELUG00000013990) lpar5b (ENSELUG00000013976) gpr55a (ENSELUG00000013972) NGEF (ENSELUG00000013959) Otomorpha ANCESTRAL SPECIES 480 ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.i.a ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.c #23 ENSGT00950000183086.a.a.b.h.a #24 Otophysi ANCESTRAL SPECIES 351 ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.i.a ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.e.a ENSGT01030000234629.C.c #23 ENSGT00950000183086.a.a.b.h.a #24 Characiphysae ANCESTRAL SPECIES 77 ENSGT00940000164640 ENSGT00390000012596.e ENSGT00940000157704.a.a ENSGT00940000175356 ENSGT00940000157718.c ENSGT00940000156181.B ENSGT00940000158610.d ENSGT01050000244924.a.b.h ENSGT00390000000954 ENSGT00390000004175.b ENSGT01010000222313.A.b.a.d.g.a ENSGT00940000154539.a.a.e ENSGT01100000263547.a.b.b.b.a.a ENSGT00940000156948.i.a ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.e.a ENSGT01030000234629.C.c #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00530000063252.b ENSGT00940000155418.a.b.b ENSGT00940000160603 ENSGT00940000159510 ENSGT00940000180166 Characiphysae_b DUPLICATION Characiphysae_b ANCESTRAL SPECIES 63 ENSGT00940000164640 ENSGT00390000012596.e ENSGT00940000157704.a.a ENSGT00940000175356 ENSGT00940000157718.c ENSGT00940000156181.B ENSGT00940000158610.d ENSGT01050000244924.a.b.h ENSGT00390000000954 ENSGT00390000004175.b ENSGT01010000222313.A.b.a.d.g.a ENSGT00940000154539.a.a.e ENSGT01100000263547.a.b.b.b.a.a ENSGT00940000156948.i.a ENSGT00390000016324 ENSGT00940000154369.g.b.c #22 ENSGT01030000234629.C.c #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183155.a.b.a.a.a ENSGT00530000063252.b ENSGT00940000155418.a.b.b ENSGT00940000160603 ENSGT00940000159510 Characoidei ANCESTRAL SPECIES 257 ENSGT01050000244924.a.b.h ENSGT00390000000954 ENSGT00390000004175.b ENSGT01010000222313.A.b.a.d.g.a ENSGT00940000154539.a.a.e ENSGT01100000263547.a.b.b.b.a.a ENSGT00940000156948.i.a ENSGT00390000016324 ENSGT00940000154369.g.b.c #22 ENSGT01030000234629.C.c #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183155.a.b.a.a.a ENSGT00530000063252.b ENSGT00940000155418.a.b.b ENSGT00940000160603 ENSGT00940000159510 Mexicana tetra MODERN SPECIES ENSAMXG00000006345 rab3aa (ENSAMXG00000043573) AGTR1 (ENSAMXG00000025929) gyg1a (ENSAMXG00000036673) HLTF (ENSAMXG00000006359) ENSAMXG00000036626 pccb (ENSAMXG00000006365) msl2a (ENSAMXG00000032232) nceh1a (ENSAMXG00000038667) PPP2R3A (ENSAMXG00000006377) si:dkey-10f21.4 (ENSAMXG00000033409) cnn3b (ENSAMXG00000038181) ENSAMXG00000006396 EPHA4 (ENSAMXG00000006406) pxylp1 (ENSAMXG00000038336) SLC25A36 (ENSAMXG00000033723) #22 spsb4b (ENSAMXG00000010781) #23 CLSTN2 (ENSAMXG00000010806) #24 ENSAMXG00000039784 fndc3ba (ENSAMXG00000006332) ENSAMXG00000029621 pld1a (ENSAMXG00000006319) tnika (ENSAMXG00000006314) slc2a2 (ENSAMXG00000006312) eif5a2 (ENSAMXG00000043662) slc7a14a (ENSAMXG00000006310) cldn11a (ENSAMXG00000040638) GRIN3B (ENSAMXG00000006305) ENSAMXG00000030466 ENSAMXG00000038294 plppr3a (ENSAMXG00000043542) Red-bellied piranha MODERN SPECIES 354 SLC25A36 (ENSPNAG00000027426) #22 spsb4b (ENSPNAG00000027380) #23 CLSTN2 (ENSPNAG00000027368) #24 ENSPNAG00000027284 FCGBP (ENSPNAG00000007016) ENSPNAG00000026893 ENSPNAG00000026851 ENSPNAG00000026842 kirrel3l (ENSPNAG00000005512) Electric eel MODERN SPECIES 19 ENSEEEG00000018699 agla (ENSEEEG00000018672) FRRS1 (ENSEEEG00000018668) ENSEEEG00000018667 PLPPR4 (ENSEEEG00000018666) plppr5a (ENSEEEG00000018665) ptbp2b (ENSEEEG00000017730) RWDD3 (ENSEEEG00000017675) hccsa.1 (ENSEEEG00000017674) ENSEEEG00000017672 si:dkey-10f21.4 (ENSEEEG00000017670) cnn3b (ENSEEEG00000017666) ENSEEEG00000017663 EPHA4 (ENSEEEG00000017658) pxylp1 (ENSEEEG00000017644) SLC25A36 (ENSEEEG00000017640) #22 spsb4b (ENSEEEG00000017639) #23 ENSEEEG00000017625 #24 ENSEEEG00000017623 ENSEEEG00000017622 ENSEEEG00000017620 APLP1 (ENSEEEG00000017609) ST14 (ENSEEEG00000017594) kirrel3l (ENSEEEG00000017586) nphs1 (ENSEEEG00000017583) ENSEEEG00000017577 ENSEEEG00000017574 ENSEEEG00000017572 ENSEEEG00000017570 ENSEEEG00000017568 Characiphysae_b ANCESTRAL SPECIES 33 ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00990000209937 ENSGT00990000208442 ENSGT00940000173713 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT00940000154369.g.b.d #22 ENSGT01030000234629.C.d #23 ENSGT00950000183116.b.a.a.a.b ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675.c ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT01030000234576.D.a.a.a ENSGT00940000160062.a ENSGT00940000157990.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163496.a.i.a ENSGT00940000159567.a.a ENSGT00940000163520.A.a.a.a.b.a ##17 ENSGT00940000157841 Electric eel MODERN SPECIES 935 SLC25A36 (ENSEEEG00000005340) #22 spsb4a (ENSEEEG00000005338) #23 Channel catfish MODERN SPECIES 8 ENSIPUG00000019233 smco4 (ENSIPUG00000019226) agla (ENSIPUG00000019133) ENSIPUG00000019125 PALMD (ENSIPUG00000019112) PLPPR4 (ENSIPUG00000019080) plppr5a (ENSIPUG00000019064) ENSIPUG00000019046 ptbp2b (ENSIPUG00000019002) rwdd3 (ENSIPUG00000018984) hccsa.1 (ENSIPUG00000018962) si:dkey-10f21.4 (ENSIPUG00000018940) cnn3b (ENSIPUG00000018922) ENSIPUG00000018904 pxylp1 (ENSIPUG00000018814) SLC25A36 (ENSIPUG00000018795) #22 ENSIPUG00000018782 spsb4b (ENSIPUG00000018765) #23 CLSTN2 (ENSIPUG00000018732) #24 aplp1 (ENSIPUG00000018710) ST14 (ENSIPUG00000018652) Kirrel (ENSIPUG00000018590) ENSIPUG00000018575 nphs1 (ENSIPUG00000018528) ENSIPUG00000018518 zbtb32 (ENSIPUG00000018508) or71at1 (ENSIPUG00000018502) or71al2 (ENSIPUG00000018490) zp2l1 (ENSIPUG00000018481) ENSIPUG00000018477 ENSIPUG00000018472 Cyprinoidei ANCESTRAL SPECIES 129 ENSGT00940000156253.a.b ENSGT00940000159077.j ENSGT00940000159077.i ENSGT00940000164824.B.a ENSGT00940000164824.A ENSGT00940000156294.c.b ENSGT00530000063946.a.b ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.i.a ENSGT01100000263547.a.b.b.b.b.a.b.b.a ENSGT01100000263547.a.b.b.b.b.a.b.b.b ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.e.a ENSGT00940000154308.D.c.b.b.b.a.b.b.b ENSGT01030000234629.C.c #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT01100000263547.a.b.b.b.b.a.b.a.a.b.a.a.a.b ENSGT00940000156013 ENSGT00390000005285 ENSGT00940000169425 ENSGT00940000160117.k.b ENSGT00940000166267.b.b.a ENSGT00940000160117.l ENSGT00940000166267.b.b.b ENSGT00940000154981.bb.a ENSGT00950000182923.B.a ENSGT00990000203615.b.a.b Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 189 ENSGT00940000158344.a.a.b ENSGT01100000263547.a.b.b.b.b.a.b.a.a.b.a.a.b.b.b.a ENSGT00940000156253.a.b.c.a ENSGT00940000159077.j ENSGT00940000159077.i.a.a ENSGT00940000164824.B.a.a ENSGT00940000164824.A ENSGT00940000156294.c.b.f ENSGT00530000063946.a.b.b ENSGT00530000063489.a.a ENSGT00940000159500 ENSGT00940000166595.b.b ENSGT00940000156504.i.a.g.b ENSGT00940000156948.i.a.a ENSGT00390000016324.l ENSGT00940000154369.g.b.e.a #22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.e.a ENSGT01030000234629.C.c.b #23 ENSGT00950000183086.a.a.b.h.a.d #24 ENSGT01100000263547.a.b.b.b.b.a.b.a.a.b.a.a.a.a.a.a.b ENSGT00940000156013.l ENSGT00390000005285 ENSGT00940000169425.b ENSGT00940000160117.l ENSGT00940000166267.b.b.b.b ENSGT00940000154981.bb.a.q ENSGT00950000182923.B.a.i ENSGT00990000203615.b.a.b.g ENSGT00390000012058.c.a.a Cyprininae_a ANCESTRAL SPECIES 38 ENSGT00940000159077.j ENSGT00940000159077.i.a.a ENSGT00940000164824.B.a.a ENSGT00940000156294.c.b.f ENSGT00530000063946.a.b.b ENSGT00530000063489.a.b ENSGT00940000166595.b.a ENSGT00940000156504.i.a.h ENSGT00530000063489.a.a ENSGT00940000159500 ENSGT00940000166595.b.b ENSGT00940000156504.i.a.g.b ENSGT01080000257462.a.b.a.b.b.b ENSGT00940000156948.i.a.a ENSGT00390000016324.l ENSGT00940000154369.g.b.e.a #22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.e.a ENSGT01030000234629.C.c.b #23 ENSGT00950000183086.a.a.b.h.a.d #24 ENSGT01100000263547.a.b.b.b.b.a.b.a.a.b.a.a.a.a.a.a.b ENSGT00940000156013.l ENSGT00390000005285 ENSGT00940000169425.a ENSGT00940000160117.k.b ENSGT00940000166267.b.b.b.a ENSGT00940000154981.bb.a.r ENSGT00950000182923.B.a.j ENSGT00990000203615.b.a.b.h ENSGT00390000012058.c.a.b ENSGT01030000234571.b.b.a.a.a.e ENSGT01040000240444.A.b.b.h Common carp reference MODERN SPECIES 26 GRIK1 (ENSCCRG00000018827) cldn8.3 (ENSCCRG00000059355) CLDN8 (ENSCCRG00000025005) cldn8.2 (ENSCCRG00000076559) TIAM1 (ENSCCRG00000023012) scaf4b (ENSCCRG00000032084) farsb (ENSCCRG00000027027) SGPP2 (ENSCCRG00000077548) ENSCCRG00000056137 pax3b (ENSCCRG00000027071) ENSCCRG00000079537 ENSCCRG00000036826 EPHA4 (ENSCCRG00000026981) ENSCCRG00000065828 pxylp1 (ENSCCRG00000070709) ENSCCRG00000074832 #22 ENSCCRG00000022567 ENSCCRG00000022580 spsb4b (ENSCCRG00000022582) #23 ENSCCRG00000055486 #24 ENSCCRG00000081656 ENSCCRG00000053636 ENSCCRG00000080057 usp16 (ENSCCRG00000024055) usp16 (ENSCCRG00000024052) ENSCCRG00000069762 ENSCCRG00000027122 fat3a (ENSCCRG00000018989) ENSCCRG00000078408 kcnj13 (ENSCCRG00000063062) efhd1 (ENSCCRG00000042422) Goldfish MODERN SPECIES 6 cldn8.3 (ENSCARG00000007720) CLDN8 (ENSCARG00000007725) cldn8.2 (ENSCARG00000007742) ENSCARG00000007749 TIAM1 (ENSCARG00000007774) scaf4b (ENSCARG00000007928) farsb (ENSCARG00000007948) ENSCARG00000008019 pax3b (ENSCARG00000008023) ENSCARG00000008029 ENSCARG00000008035 ENSCARG00000008039 EPHA4 (ENSCARG00000008070) ENSCARG00000008636 pxylp1 (ENSCARG00000008647) SLC25A36 (ENSCARG00000008668) #22 ENSCARG00000008693 ftr72 (ENSCARG00000008685) ENSCARG00000008698 ENSCARG00000008700 spsb4b (ENSCARG00000008708) #23 CLSTN2 (ENSCARG00000008713) #24 ENSCARG00000008725 ENSCARG00000008761 efhd1 (ENSCARG00000009024) kcnj13 (ENSCARG00000009029) GAL3ST2 (ENSCARG00000009035) robo2 (ENSCARG00000009107) ENSCARG00000010820 ROBO1 (ENSCARG00000010981) ENSCARG00000015097 Cyprininae ANCESTRAL SPECIES 856 ENSGT00940000156504.i.a.g.a ENSGT01080000257462.a.a.a.b.b ENSGT00940000156948.i.a.b ENSGT01100000263547.a.b.b.b.b.a.b.b.a.a.a ENSGT01100000263547.a.b.b.b.b.a.b.b.b ENSGT00390000016324.k ENSGT00940000154369.g.b.e.b #22 Goldfish DUPLICATION Goldfish MODERN SPECIES 4 ENSCARG00000017564 TIAM1 (ENSCARG00000017412) scaf4b (ENSCARG00000017368) farsb (ENSCARG00000017236) SGPP2 (ENSCARG00000017193) ENSCARG00000017184 pax3b (ENSCARG00000017178) pax3b (ENSCARG00000017170) ENSCARG00000017162 ENSCARG00000017155 EPHA4 (ENSCARG00000016541) ENSCARG00000016487 ENSCARG00000016463 ENSCARG00000016455 pxylp1 (ENSCARG00000016445) SLC25A36 (ENSCARG00000016421) #22 ENSCARG00000016398 ENSCARG00000016385 spsb4b (ENSCARG00000016379) #23 CLSTN2 (ENSCARG00000016313) #24 ENSCARG00000016306 ENSCARG00000016299 ENSCARG00000016295 ENSCARG00000016289 ENSCARG00000016285 dnaaf9 (ENSCARG00000016094) cfd (ENSCARG00000016075) foxi2 (ENSCARG00000016066) fgfr3 (ENSCARG00000013122) ENSCARG00000012970 letm1 (ENSCARG00000011981) Goldfish MODERN SPECIES 34 GRIK1 (ENSCARG00000035281) CLDN8 (ENSCARG00000035263) cldn8.2 (ENSCARG00000035259) ENSCARG00000035257 TIAM1 (ENSCARG00000035143) scaf4b (ENSCARG00000035110) farsb (ENSCARG00000034953) SGPP2 (ENSCARG00000034923) ENSCARG00000034916 pax3b (ENSCARG00000034899) ENSCARG00000034883 EPHA4 (ENSCARG00000034428) ENSCARG00000034369 ENSCARG00000034324 pxylp1 (ENSCARG00000034293) SLC25A36 (ENSCARG00000034257) #22 ENSCARG00000034212 ENSCARG00000034196 ENSCARG00000034180 ENSCARG00000034169 ENSCARG00000034115 ENSCARG00000034050 wsb1 (ENSCARG00000034018) ENSCARG00000034003 cuedc1b (ENSCARG00000033982) vezf1b (ENSCARG00000033960) ENSCARG00000032192 OMG (ENSCARG00000032138) ENSCARG00000032129 NF1 (ENSCARG00000031607) akap1b (ENSCARG00000031328) Cyprininae_a ANCESTRAL SPECIES 585 ENSGT00940000156504.i.a.g.a ENSGT01080000257462.a.a.a.b.b ENSGT00940000156948.i.a.b ENSGT01100000263547.a.b.b.b.b.a.b.b.a.a.a ENSGT01100000263547.a.b.b.b.b.a.b.b.b ENSGT00390000016324.k ENSGT00940000154369.g.b.e.b #22 ENSGT00940000154308.D.c.b.b.b.a.b.b.b ENSGT01030000234629.C.c.a #23 ENSGT00950000183086.a.a.b.h.a.c #24 Common carp reference MODERN SPECIES 39 ENSCCRG00000074529 ENSCCRG00000024558 cldn8.2 (ENSCCRG00000063127) TIAM1 (ENSCCRG00000001831) scaf4b (ENSCCRG00000027095) farsb (ENSCCRG00000027083) ENSCCRG00000027080 SGPP2 (ENSCCRG00000054393) pax3b (ENSCCRG00000071060) ENSCCRG00000027000 ENSCCRG00000070321 ENSCCRG00000056242 EPHA4 (ENSCCRG00000019015) ENSCCRG00000072090 pxylp1 (ENSCCRG00000078562) ENSCCRG00000028342 #22 ENSCCRG00000071838 ENSCCRG00000028351 ENSCCRG00000011030 ENSCCRG00000011026 #23 ENSCCRG00000075956 #24 ENSCCRG00000064253 ENSCCRG00000082540 ENSCCRG00000066272 ENSCCRG00000080261 usp16 (ENSCCRG00000029085) ENSCCRG00000029090 ENSCCRG00000067250 fat3a (ENSCCRG00000063995) ENSCCRG00000082279 kcnj13 (ENSCCRG00000076232) Cyprininae ANCESTRAL SPECIES ENSGT00940000154369.g.b.f #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000154369.g.b.f #22 Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 73 GRIK1 (ENSSGRG00000008992) cldn8.3 (ENSSGRG00000008987) cldn8.2 (ENSSGRG00000008985) TIAM1 (ENSSGRG00000008434) scaf4b (ENSSGRG00000008411) farsb (ENSSGRG00000007425) SGPP2 (ENSSGRG00000007349) ENSSGRG00000007347 pax3b (ENSSGRG00000007345) ENSSGRG00000007343 ENSSGRG00000007340 ENSSGRG00000007336 ENSSGRG00000007334 EPHA4 (ENSSGRG00000006736) pxylp1 (ENSSGRG00000006720) SLC25A36 (ENSSGRG00000006703) #22 ENSSGRG00000006700 ENSSGRG00000006699 spsb4b (ENSSGRG00000006694) #23 CLSTN2 (ENSSGRG00000006350) #24 usp16 (ENSSGRG00000006314) ENSSGRG00000006306 ENSSGRG00000006302 ENSSGRG00000006298 fat3a (ENSSGRG00000005012) ENSSGRG00000004978 ENSSGRG00000004977 GAL3ST2 (ENSSGRG00000004973) GAL3ST2 (ENSSGRG00000004971) kcnj13 (ENSSGRG00000004969) efhd1 (ENSSGRG00000004966) Golden-line barbel MODERN SPECIES 659 ENSSGRG00000026318 ENSSGRG00000026316 cldn8.2 (ENSSGRG00000026315) TIAM1 (ENSSGRG00000026313) scaf4b (ENSSGRG00000026311) farsb (ENSSGRG00000026019) SGPP2 (ENSSGRG00000026004) ENSSGRG00000026003 pax3b (ENSSGRG00000026002) ENSSGRG00000026001 ENSSGRG00000025999 ENSSGRG00000025998 ENSSGRG00000025997 EPHA4 (ENSSGRG00000024704) pxylp1 (ENSSGRG00000024678) SLC25A36 (ENSSGRG00000024676) #22 ENSSGRG00000024674 ENSSGRG00000024673 ENSSGRG00000024671 ENSSGRG00000024670 CLSTN2 (ENSSGRG00000024668) #24 Zebrafish MODERN SPECIES 6 ENSDARG00000088274 GRIK1 (ENSDARG00000040627) cldn8.2 (ENSDARG00000040628) cldn8.3 (ENSDARG00000099950) TIAM1 (ENSDARG00000025920) scaf4b (ENSDARG00000018854) farsb (ENSDARG00000016864) SGPP2 (ENSDARG00000079608) pax3b (ENSDARG00000028348) ENSDARG00000097725 EPHA4 (ENSDARG00000010767) ENSDARG00000095665 ENSDARG00000077673 ENSDARG00000096545 pxylp1 (ENSDARG00000040644) SLC25A36 (ENSDARG00000015915) #22 ENSDARG00000098004 ftr72 (ENSDARG00000026704) ENSDARG00000095298 ENSDARG00000097679 ENSDARG00000076093 ENSDARG00000097373 ENSDARG00000040536 ENSDARG00000053800 spsb4b (ENSDARG00000040538) #23 CLSTN2 (ENSDARG00000060638) #24 ENSDARG00000093532 ENSDARG00000094350 ENSDARG00000078101 ENSDARG00000076819 ENSDARG00000095528 Osteoglossiformes ANCESTRAL SPECIES 61 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979.e ENSGT00970000193372.b.a.b ENSGT00390000010895.d ENSGT00390000013776 ENSGT00940000155954.a.l ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504 ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.f #23 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.e #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00940000160165.a ENSGT00900000141083.c.a ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.f ENSGT00940000164578.a.a ENSGT00390000004360.a.b.b ENSGT00950000183115.a ENSGT01040000240444.A.b.b ENSGT01040000240444.A.b.a.a ENSGT01030000234571.b.b.a.a.a ENSGT00940000156108.c ENSGT00990000203615.b.a.b P. kingsleyae MODERN SPECIES 168 mterf4 (ENSPKIG00000014785) ENSPKIG00000014802 KLHL6 (ENSPKIG00000014846) PAK2 (ENSPKIG00000014902) ing5b (ENSPKIG00000015034) d2hgdh (ENSPKIG00000015069) acvr1l (ENSPKIG00000015113) otomp (ENSPKIG00000015159) HS6ST1 (ENSPKIG00000015216) uggt1 (ENSPKIG00000015319) ek1 (ENSPKIG00000015583) ENSPKIG00000015614 ENSPKIG00000015635 ENSPKIG00000015662 EPHA4 (ENSPKIG00000015684) ENSPKIG00000015745 #22 spsb4a (ENSPKIG00000015796) #23 CFAP57 (ENSPKIG00000015827) ENSPKIG00000015853 ANGPTL3 (ENSPKIG00000015888) ENSPKIG00000015961 LRP8 (ENSPKIG00000016024) ENSPKIG00000016072 ENSPKIG00000016085 FEM1A (ENSPKIG00000016096) sin3b (ENSPKIG00000016126) haus5 (ENSPKIG00000016198) fzr1a (ENSPKIG00000016265) ENSPKIG00000016343 ENSPKIG00000016358 mfsd12a (ENSPKIG00000016382) Osteoglossocephalai ANCESTRAL SPECIES 123 ENSGT00940000165979 ENSGT00970000193372.b.b ENSGT00970000193372.b.a.a ENSGT00390000010895 ENSGT00970000193372.b.a.b ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504 ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b #22 ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C #23 ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00940000160165.a ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e Clupeocephala ANCESTRAL SPECIES 451 ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a Otomorpha ANCESTRAL SPECIES 38 ENSGT00940000160050 ENSGT00940000160480.c.b ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00980000200268 ENSGT01060000253400 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT00940000154369.h ##22 ENSGT01030000234629.C.d #23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675.c ENSGT00940000160165.b ENSGT00900000141083.c.a Clupeiformes ANCESTRAL SPECIES 283 ENSGT00950000183136.b.b ENSGT00950000183115.a.a.b ENSGT00940000161398.f.c ENSGT00940000161398.f.d ENSGT00940000156342.c ENSGT00940000162075.a.b ENSGT00900000141083.c.a ENSGT00940000159675.c ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00940000165265.g.a ENSGT00980000200268 ENSGT00940000173713 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.d #23 Atlantic herring MODERN SPECIES 14 ENSCHAG00000000746 ENSCHAG00000000726 ENSCHAG00000000695 ENSCHAG00000000663 ENSCHAG00000000604 ENSCHAG00000026614 ENSCHAG00000026611 ENSCHAG00000026607 ENSCHAG00000026604 ENSCHAG00000026601 ENSCHAG00000026599 ENSCHAG00000026597 ccl34a.3 (ENSCHAG00000026591) ENSCHAG00000026588 epha4a (ENSCHAG00000026105) slc25a36a (ENSCHAG00000026026) ##22 SPSB4 (ENSCHAG00000026022) #23 ENSCHAG00000026021 ENSCHAG00000026016 ENSCHAG00000026010 uggt1 (ENSCHAG00000024188) hs6st1a (ENSCHAG00000024080) otomp (ENSCHAG00000024069) acvr1l (ENSCHAG00000024046) d2hgdh (ENSCHAG00000023960) adipoqb (ENSCHAG00000023950) ENSCHAG00000023749 ENSCHAG00000023316 ENSCHAG00000023296 ENSCHAG00000023278 ENSCHAG00000022721 Denticle herring MODERN SPECIES 14 zgc:110158 (ENSDCDG00000000248) ZNF622 (ENSDCDG00000032748) d2hgdh (ENSDCDG00000032743) acvr1l (ENSDCDG00000032726) otomp (ENSDCDG00000032724) ENSDCDG00000032723 ENSDCDG00000032722 hs6st1a (ENSDCDG00000032718) uggt1 (ENSDCDG00000032456) epha4b (ENSDCDG00000032143) ENSDCDG00000032102 ENSDCDG00000032099 ENSDCDG00000032096 epha4a (ENSDCDG00000031988) ENSDCDG00000031974 slc25a36a (ENSDCDG00000031968) ##22 spsb4a (ENSDCDG00000031962) #23 clstn2a (ENSDCDG00000030858) ##24 NMNAT3 (ENSDCDG00000030776) rbp1.1 (ENSDCDG00000030771) copb2 (ENSDCDG00000030458) foxl2b (ENSDCDG00000030447) per2 (ENSDCDG00000030438) hes6 (ENSDCDG00000030425) itm2cb (ENSDCDG00000030421) lpar5a (ENSDCDG00000030419) GPR55 (ENSDCDG00000030418) gigyf2 (ENSDCDG00000030413) ENSDCDG00000030408 ENSDCDG00000030406 ENSDCDG00000030405 Otophysi ANCESTRAL SPECIES 3 ENSGT00940000160050 ENSGT00940000160480.c.b ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00990000209937 ENSGT01060000253400 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT00940000154369.h ##22 ENSGT01030000234629.C.d #23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675.c ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00940000160062.a ENSGT00980000198654 ENSGT00940000157990.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163496.a.i.a ENSGT00940000159567.a.a ENSGT00940000157841 Characiphysae ANCESTRAL SPECIES 35 ENSGT00940000160480.c.b ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00990000209937 ENSGT00990000208442 ENSGT00940000173713 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT01030000234629.C.d #23 ENSGT00950000183116.b.a.a.a.b ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675.c ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT01030000234576.D.a.a.a ENSGT00940000160062.a ENSGT00940000157990.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163496.a.i.a ENSGT00940000159567.a.a ENSGT00940000157841 Characiphysae_b ANCESTRAL SPECIES 33 ENSGT00940000160480.c.b ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00990000209937 ENSGT00990000208442 ENSGT00940000173713 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT00940000154369.g.b.d #22 ENSGT01030000234629.C.d #23 ENSGT00950000183116.b.a.a.a.b ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675.c ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT01030000234576.D.a.a.a ENSGT00940000160062.a ENSGT00940000157990.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163496.a.i.a ENSGT00940000159567.a.a Characoidei ANCESTRAL SPECIES 20 ENSGT00940000160480.c.b ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00990000209937 ENSGT00990000208442 ENSGT00940000173713 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT01030000234629.C.d #23 ENSGT00950000183116.b.a.a.a.b ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675.c ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT01030000234576.D.a.a.a ENSGT00940000160062.a ENSGT00940000157990.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163520.A.a.a.a.b.a ##17 ENSGT00940000157841 ENSGT00940000162200.a.b Mexicana tetra MODERN SPECIES 7 klhl18 (ENSAMXG00000034172) ENSAMXG00000002692 ENSAMXG00000031440 NRBP2 (ENSAMXG00000000298) puf60a (ENSAMXG00000036570) ENSAMXG00000034383 tmub1 (ENSAMXG00000037356) epha4b (ENSAMXG00000016842) ENSAMXG00000036237 ENSAMXG00000042025 ENSAMXG00000038570 ENSAMXG00000036590 ENSAMXG00000030404 epha4a (ENSAMXG00000006290) ENSAMXG00000041103 slc25a36a (ENSAMXG00000006179) ##22 zgc:136870 (ENSAMXG00000031894) spsb4a (ENSAMXG00000033897) #23 clstn2a (ENSAMXG00000006013) ##24 NMNAT3 (ENSAMXG00000029880) rbp1.1 (ENSAMXG00000036023) rbp2b (ENSAMXG00000038423) copb2 (ENSAMXG00000005818) ENSAMXG00000031441 rem2 (ENSAMXG00000005708) carmil3 (ENSAMXG00000005612) ENSAMXG00000043196 ENSAMXG00000021206 CDH24 (ENSAMXG00000042071) ENSAMXG00000029585 ##17 PSMB11 (ENSAMXG00000042921) Red-bellied piranha MODERN SPECIES 363 ENSPNAG00000020792 ccl34a.3 (ENSPNAG00000020777) ENSPNAG00000020755 epha4a (ENSPNAG00000020745) slc25a36a (ENSPNAG00000020683) ##22 spsb4a (ENSPNAG00000020657) #23 zgc:136870 (ENSPNAG00000020650) Channel catfish MODERN SPECIES 26 keap1a (ENSIPUG00000008421) Ssbp3 (ENSIPUG00000008191) znf622 (ENSIPUG00000008147) d2hgdh (ENSIPUG00000008094) acvr1l (ENSIPUG00000008043) otomp (ENSIPUG00000008009) ENSIPUG00000008000 hs6st1a (ENSIPUG00000007988) uggt1 (ENSIPUG00000007756) epha4b (ENSIPUG00000007629) ENSIPUG00000007607 ENSIPUG00000007598 ENSIPUG00000007592 ccl20l (ENSIPUG00000007562) epha4 (ENSIPUG00000007517) slc25a36 (ENSIPUG00000007464) ##22 spsb4a (ENSIPUG00000007449) #23 clstn2a (ENSIPUG00000007348) ##24 RBP2 (ENSIPUG00000007321) Copb2 (ENSIPUG00000007205) ENSIPUG00000007170 REM2 (ENSIPUG00000007149) carmil3 (ENSIPUG00000007075) ENSIPUG00000007045 si:ch211-51h9.6 (ENSIPUG00000007053) ENSIPUG00000007035 ENSIPUG00000007014 ENSIPUG00000007006 ENSIPUG00000007003 ENSIPUG00000006975 psmb5 (ENSIPUG00000006941) Cyprinoidei ANCESTRAL SPECIES 1 ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00990000209937 ENSGT00990000208442 ENSGT00940000173713 ENSGT01060000253400 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.d #23 ENSGT00940000162556.D.b.a ENSGT00950000183116.b.a.a.a.b ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675.c.a ENSGT00940000159675.c.b ENSGT00940000159675.d ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182774.b.b.b.a.b.a ENSGT00940000160062.a ENSGT00980000198654 ENSGT00940000157990.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b Cyprininae ANCESTRAL SPECIES 72 ENSGT00950000183049.C.a.a.h.a ENSGT00390000018047.u ENSGT00550000075086.b ENSGT00940000166078.a ENSGT00940000166763.a ENSGT00950000183071.a.a.b.c.c.c ENSGT00390000004600.b.a.i ENSGT00940000165265.g.a.c ENSGT00990000209937.a.b ENSGT00990000209937.a.a ENSGT00990000209992.B ENSGT00990000208442.a.a ENSGT00940000173713.g ENSGT01030000235105.a ENSGT00940000156948.i.b.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.d.b #23 ENSGT00940000162556.D.b.a.a ENSGT00950000183116.b.a.a.a.b.c.b ENSGT00950000183116.b.a.a.a.b.c.a.b ENSGT00950000183086.a.a.b.h.b.b ##24 ENSGT00950000183179.b.b.f.b ENSGT00940000159675.c.a ENSGT00940000159675.d.b ENSGT00940000160165.b.b ENSGT00900000141083.c.a.f ENSGT00950000182774.b.b.b.a.b.a ENSGT00940000160062.a.a ENSGT00980000198654.a ENSGT00940000157990.a.a.b ENSGT00940000163496.a.i.b.a.b.a Goldfish DUPLICATION Goldfish MODERN SPECIES 19 gtpbp4 (ENSCARG00000015309) SLCO5A1 (ENSCARG00000015522) LACTB2 (ENSCARG00000015529) ESYT2 (ENSCARG00000015558) ENSCARG00000015846 epha4a (ENSCARG00000015854) ENSCARG00000015929 slc25a36a (ENSCARG00000015937) ##22 spsb4a (ENSCARG00000015966) #23 zgc:136870 (ENSCARG00000015971) ENSCARG00000015975 clstn2a (ENSCARG00000016008) ##24 ENSCARG00000016560 ENSCARG00000016567 rbp1.2 (ENSCARG00000016577) rbp2b (ENSCARG00000016595) copb2 (ENSCARG00000016644) ENSCARG00000017160 rem2 (ENSCARG00000017167) ENSCARG00000017177 carmil3 (ENSCARG00000017196) ENSCARG00000017326 ENSCARG00000017333 Goldfish MODERN SPECIES 11 ebi3 (ENSCARG00000002858) odf3l2a (ENSCARG00000002864) crlf1a (ENSCARG00000002875) keap1a (ENSCARG00000002888) epha4b (ENSCARG00000002910) ENSCARG00000003065 ENSCARG00000003075 ENSCARG00000003087 ENSCARG00000003094 ENSCARG00000003103 ENSCARG00000003113 ENSCARG00000003134 ENSCARG00000003155 ENSCARG00000003165 epha4a (ENSCARG00000003291) slc25a36a (ENSCARG00000005538) ##22 spsb4a (ENSCARG00000005624) #23 zgc:136870 (ENSCARG00000005626) ENSCARG00000005628 clstn2a (ENSCARG00000005654) ##24 ENSCARG00000006086 ENSCARG00000006101 RBP1 (ENSCARG00000006111) rbp1.2 (ENSCARG00000006129) rbp2b (ENSCARG00000006140) copb2 (ENSCARG00000006255) rem2 (ENSCARG00000007349) carmil3 (ENSCARG00000007368) rem2 (ENSCARG00000007420) copb2 (ENSCARG00000007476) rbp2b (ENSCARG00000007586) Cyprininae_a DUPLICATION Cyprininae_a ANCESTRAL SPECIES 149 ENSGT00940000166078.b ENSGT00940000166763.b ENSGT00950000183071.a.a.b.c.c.d ENSGT00390000004600.b.a.j ENSGT00940000165265.g.a.d ENSGT00990000209937.b ENSGT00990000208442.b ENSGT00940000173713.g ENSGT01030000235105.b.b ENSGT00990000209992.A ENSGT00990000208442.a.b ENSGT00940000173713.h.a ENSGT01060000253400 ENSGT01030000235105.a ENSGT00940000156948.i.b.b ENSGT00940000154369.g.a.c ##22 ENSGT01030000234629.C.d.b #23 ENSGT00940000162556.D.b.a.a ENSGT00950000183116.b.a.a.a.b.c.b ENSGT00950000183116.b.a.a.a.b.c.a.b ENSGT00950000183086.a.a.b.h.b.b ##24 ENSGT00950000183179.b.b.f.b ENSGT00940000159675.c.a.b ENSGT00940000159675.c.b ENSGT00940000159675.d.b ENSGT00940000160165.b.b ENSGT00900000141083.c.a.f ENSGT00950000182774.b.b.b.a.b.a ENSGT00940000160062.a.a ENSGT00980000198654.a ENSGT00940000157990.a.a.b Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 791 ENSSGRG00000050135 ENSSGRG00000050136 ENSSGRG00000050138 ENSSGRG00000050139 ENSSGRG00000050140 ENSSGRG00000050142 epha4a (ENSSGRG00000050143) slc25a36a (ENSSGRG00000050151) ##22 slc25a36a (ENSSGRG00000050155) ##22 spsb4a (ENSSGRG00000050156) #23 ENSSGRG00000050157 ENSSGRG00000050158 clstn2a (ENSSGRG00000050159) ##24 ENSSGRG00000050160 Golden-line barbel MODERN SPECIES 791 ENSSGRG00000050135 ENSSGRG00000050136 ENSSGRG00000050138 ENSSGRG00000050139 ENSSGRG00000050140 ENSSGRG00000050142 epha4a (ENSSGRG00000050143) slc25a36a (ENSSGRG00000050151) ##22 slc25a36a (ENSSGRG00000050155) ##22 spsb4a (ENSSGRG00000050156) #23 ENSSGRG00000050157 ENSSGRG00000050158 clstn2a (ENSSGRG00000050159) ##24 ENSSGRG00000050160 Common carp reference MODERN SPECIES 21 otomp (ENSCCRG00000079751) acvr1l (ENSCCRG00000062115) hs6st1a (ENSCCRG00000074522) uggt1 (ENSCCRG00000002547) epha4b (ENSCCRG00000077447) ENSCCRG00000067743 ENSCCRG00000045104 ENSCCRG00000024391 ENSCCRG00000024388 ENSCCRG00000024385 ENSCCRG00000026063 ENSCCRG00000026069 si:ch211-122l24.6 (ENSCCRG00000082253) ENSCCRG00000026157 epha4a (ENSCCRG00000078510) slc25a36a (ENSCCRG00000053985) ##22 spsb4a (ENSCCRG00000019229) #23 zgc:136870 (ENSCCRG00000019176) ENSCCRG00000056006 ENSCCRG00000019168 clstn2a (ENSCCRG00000066034) ##24 NMNAT3 (ENSCCRG00000012872) RBP1 (ENSCCRG00000055369) rbp1.1 (ENSCCRG00000012885) rbp1.2 (ENSCCRG00000012862) copb2 (ENSCCRG00000080500) si:ch211-119o8.6 (ENSCCRG00000052949) rem2 (ENSCCRG00000000217) ENSCCRG00000000209 carmil3 (ENSCCRG00000000152) ENSCCRG00000072148 Cyprininae_a ANCESTRAL SPECIES 84 ENSGT00950000183049.C.a.a.h.a ENSGT00390000018047.u ENSGT00550000075086.b ENSGT00940000166078.a ENSGT00940000166763.a ENSGT00950000183071.a.a.b.c.c.c ENSGT00390000004600.b.a.i ENSGT00940000165265.g.a.c ENSGT00990000209937.a.b ENSGT00990000209937.a.a ENSGT00990000209992.B ENSGT00990000208442.a.a ENSGT00940000173713.h.b.a ENSGT01030000235105.b.a ENSGT00940000156948.i.b.a ENSGT00940000154369.g.a.d ##22 ENSGT01030000234629.C.d.a #23 ENSGT00940000162556.D.b.a.b ENSGT00950000183116.b.a.a.a.b.d ENSGT00950000183116.b.a.a.a.b.c.a.a ENSGT00950000183086.a.a.b.h.b.a ##24 ENSGT00950000183179.b.b.f.a ENSGT00940000159675.c.a.a ENSGT00940000159675.d.a ENSGT00940000160165.b.a ENSGT00900000141083.c.a.e ENSGT00940000160062.a.b ENSGT00940000159286.a.a ENSGT00940000157990.a.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163496.a.i.b.a.a.a Common carp reference MODERN SPECIES 29 ENSCCRG00000011191 d2hgdh (ENSCCRG00000011782) acvr1l (ENSCCRG00000011267) otomp (ENSCCRG00000011789) hs6st1a (ENSCCRG00000082051) uggt1 (ENSCCRG00000037592) epha4b (ENSCCRG00000076007) ENSCCRG00000054238 ENSCCRG00000080585 ENSCCRG00000065317 ENSCCRG00000066870 ENSCCRG00000082671 ENSCCRG00000077253 ENSCCRG00000035312 epha4a (ENSCCRG00000081582) slc25a36a (ENSCCRG00000060891) ##22 spsb4a (ENSCCRG00000044649) #23 zgc:136870 (ENSCCRG00000059635) ENSCCRG00000077349 ENSCCRG00000074438 ENSCCRG00000010953 ENSCCRG00000010951 clstn2a (ENSCCRG00000032694) ##24 ENSCCRG00000044641 ENSCCRG00000044638 NMNAT3 (ENSCCRG00000012853) RBP1 (ENSCCRG00000012851) rbp1.2 (ENSCCRG00000012849) rbp2b (ENSCCRG00000006096) copb2 (ENSCCRG00000006200) rem2 (ENSCCRG00000006109) Zebrafish MODERN SPECIES 11 crlf1a (ENSDARG00000024365) keap1a (ENSDARG00000016132) SSBP4 (ENSDARG00000056490) ZNF622 (ENSDARG00000014692) d2hgdh (ENSDARG00000060210) acvr1l (ENSDARG00000014986) otomp (ENSDARG00000040306) hs6st1a (ENSDARG00000054754) uggt1 (ENSDARG00000054746) epha4b (ENSDARG00000011600) ccl34a.4 (ENSDARG00000090873) ccl34a.3 (ENSDARG00000094983) si:ch211-122l24.6 (ENSDARG00000112759) ENSDARG00000112125 epha4a (ENSDARG00000054454) slc25a36a (ENSDARG00000038731) ##22 zgc:136870 (ENSDARG00000054837) spsb4a (ENSDARG00000016084) #23 ENSDARG00000095040 clstn2a (ENSDARG00000060637) ##24 NMNAT3 (ENSDARG00000077034) rbp1.1 (ENSDARG00000018077) rbp1.2 (ENSDARG00000038742) rbp2b (ENSDARG00000093774) copb2 (ENSDARG00000038743) si:ch211-119o8.6 (ENSDARG00000026972) rem2 (ENSDARG00000074064) ENSDARG00000075562 carmil3 (ENSDARG00000086990) ENSDARG00000111637 CDH24 (ENSDARG00000077996) Euteleosteomorpha ANCESTRAL SPECIES 63 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000161729.m.a ENSGT00940000180772 ENSGT00390000011725.d ENSGT00940000153655.A.b ENSGT00390000011127.d Acanthomorphata ANCESTRAL SPECIES ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000163126.b.b ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Euacanthomorphacea ANCESTRAL SPECIES 4 ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Ovalentaria ANCESTRAL SPECIES 5 ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Atherinomorphae ANCESTRAL SPECIES 4 ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Cyprinodontiformes ANCESTRAL SPECIES 5 ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Aplocheiloidei ANCESTRAL SPECIES 19 ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Mangrove rivulus MODERN SPECIES 64 odr4 (ENSKMAG00000009510) TPR (ENSKMAG00000009412) dusp12 (ENSKMAG00000009384) ENSKMAG00000009357 OLFML2B (ENSKMAG00000009333) ENSKMAG00000009312 ENSKMAG00000009283 kifap3b (ENSKMAG00000009197) PDC (ENSKMAG00000009178) ENSKMAG00000009157 CERS4 (ENSKMAG00000009138) CTXN1 (ENSKMAG00000009121) TIMM44 (ENSKMAG00000009060) rab11bb (ENSKMAG00000009033) MARCHF2 (ENSKMAG00000009002) slc25a36a (ENSKMAG00000008956) ##22 spsb4a (ENSKMAG00000008932) ##23 clstn2a (ENSKMAG00000008838) ##24 NMNAT3 (ENSKMAG00000008800) rbp1.1 (ENSKMAG00000008788) rbp2b (ENSKMAG00000008760) copb2 (ENSKMAG00000008663) dvl3a (ENSKMAG00000008628) ap2m1a (ENSKMAG00000008592) pcyt1aa (ENSKMAG00000008554) ENSKMAG00000008520 DYNC1I2 (ENSKMAG00000008383) slc25a12 (ENSKMAG00000008292) metap1d (ENSKMAG00000008227) itga6b (ENSKMAG00000008162) ENSKMAG00000008097 Turquoise killifish MODERN SPECIES 1618 PTBP2B (ENSNFUG00015023143) dpydb (ENSNFUG00015023011) C2H1ORF27 (ENSNFUG00015023001) TPRA (ENSNFUG00015021506) prg4a (ENSNFUG00015021413) dusp12 (ENSNFUG00015021389) OLFML2BB (ENSNFUG00015021376) ENSNFUG00015021367 KIFAP3B (ENSNFUG00015020250) OLPD-R (ENSNFUG00015020202) CERS4 (ENSNFUG00015020174) CTXN1 (ENSNFUG00015020167) TIMM44 (ENSNFUG00015020126) Nfu_g_1_020481 (ENSNFUG00015020092) MARCH2 (ENSNFUG00015020081) slc25a36a (ENSNFUG00015020070) ##22 SPSB4 (ENSNFUG00015020062) ##23 clstn2a (ENSNFUG00015019721) ##24 NMNAT3 (ENSNFUG00015019677) NMNAT3 (ENSNFUG00015019671) rbp2b (ENSNFUG00015019621) COPB2 (ENSNFUG00015018238) dvl3a (ENSNFUG00015017928) ENSNFUG00015017891 LINGO3 (ENSNFUG00015017886) ONECUT3 (ENSNFUG00015017880) tcf3a (ENSNFUG00015017863) UQCR11 (ENSNFUG00015017854) mbd3a (ENSNFUG00015017839) MEX3D (ENSNFUG00015017831) BTBD2 (ENSNFUG00015016901) Cyprinodontoidei ANCESTRAL SPECIES 2 ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b.g ENSGT00940000155353.a.a.b.h ENSGT00940000164127.b NAME_4 ANCESTRAL SPECIES 9 ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b.g ENSGT00940000155353.a.a.b.h ENSGT00940000164127.b Mummichog MODERN SPECIES 2326 ENSFHEG00000018261 CTXN1 (ENSFHEG00000018270) TIMM44 (ENSFHEG00000018339) rab11bb (ENSFHEG00000018353) MARCHF2 (ENSFHEG00000018375) slc25a36a (ENSFHEG00000018399) ##22 spsb4a (ENSFHEG00000018422) ##23 clstn2a (ENSFHEG00000018475) ##24 NMNAT3 (ENSFHEG00000018505) rbp1.1 (ENSFHEG00000018522) copb2 (ENSFHEG00000018594) dvl3a (ENSFHEG00000018651) ap2m1a (ENSFHEG00000018703) pcyt1aa (ENSFHEG00000018749) and3 (ENSFHEG00000018762) DYNC1I2 (ENSFHEG00000018845) slc25a12 (ENSFHEG00000018890) metap1d (ENSFHEG00000018950) itga6b (ENSFHEG00000019221) ENSFHEG00000019239 rapgef4b (ENSFHEG00000019375) Sheepshead minnow MODERN SPECIES 336 rab2a (ENSCVAG00000017623) CHD7 (ENSCVAG00000017584) ptbp2b (ENSCVAG00000017566) dpydb (ENSCVAG00000017559) odr4 (ENSCVAG00000017457) TPR (ENSCVAG00000017444) dusp12 (ENSCVAG00000017311) OLFML2B (ENSCVAG00000017284) ENSCVAG00000017271 kifap3b (ENSCVAG00000017254) PDC (ENSCVAG00000017136) ENSCVAG00000017123 TIMM44 (ENSCVAG00000017060) rab11bb (ENSCVAG00000017021) MARCHF2 (ENSCVAG00000016997) slc25a36a (ENSCVAG00000016985) ##22 ENSCVAG00000016936 spsb4a (ENSCVAG00000016921) ##23 clstn2a (ENSCVAG00000016907) ##24 ENSCVAG00000016794 Poeciliinae ANCESTRAL SPECIES 6 ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b.g ENSGT00940000155353.a.a.b.h ENSGT00940000164127.b Poecilia ANCESTRAL SPECIES 19 ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b.g ENSGT00940000155353.a.a.b.h ENSGT00940000164127.b NAME_6 ANCESTRAL SPECIES 228 ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b.g ENSGT00940000155353.a.a.b.h ENSGT00940000164127.b Amazon molly MODERN SPECIES 422 rab2a (ENSPFOG00000004786) CHD7 (ENSPFOG00000004891) ptbp2b (ENSPFOG00000005646) dpydb (ENSPFOG00000005785) odr4 (ENSPFOG00000005978) ENSPFOG00000006006 prg4a (ENSPFOG00000006768) dusp12 (ENSPFOG00000006822) ENSPFOG00000020348 OLFML2B (ENSPFOG00000006875) ENSPFOG00000006956 CERS4 (ENSPFOG00000007021) TIMM44 (ENSPFOG00000007215) rab11bb (ENSPFOG00000024114) MARCHF2 (ENSPFOG00000007476) slc25a36a (ENSPFOG00000007512) ##22 spsb4a (ENSPFOG00000007613) ##23 clstn2a (ENSPFOG00000007644) ##24 NMNAT3 (ENSPFOG00000008559) rbp1.1 (ENSPFOG00000023452) copb2 (ENSPFOG00000008606) dvl3a (ENSPFOG00000008888) ap2m1a (ENSPFOG00000009058) pcyt1aa (ENSPFOG00000009131) and3 (ENSPFOG00000009203) DYNC1I2 (ENSPFOG00000009232) slc25a12 (ENSPFOG00000009599) metap1d (ENSPFOG00000009936) itga6b (ENSPFOG00000010117) ENSPFOG00000010742 rapgef4b (ENSPFOG00000010884) Sailfin molly MODERN SPECIES 1959 ENSPLAG00000001628 CTXN1 (ENSPLAG00000001608) TIMM44 (ENSPLAG00000001606) rab11bb (ENSPLAG00000001598) MARCHF2 (ENSPLAG00000001587) slc25a36a (ENSPLAG00000001581) ##22 Platyfish MODERN SPECIES 20 dpydb (ENSXMAG00000018645) odr4 (ENSXMAG00000018668) TPR (ENSXMAG00000018684) prg4a (ENSXMAG00000018717) dusp12 (ENSXMAG00000018722) ENSXMAG00000027606 OLFML2B (ENSXMAG00000018729) ENSXMAG00000026629 kifap3b (ENSXMAG00000018739) PDC (ENSXMAG00000018762) ENSXMAG00000018778 CTXN1 (ENSXMAG00000026623) TIMM44 (ENSXMAG00000018819) rab11bb (ENSXMAG00000011926) MARCHF2 (ENSXMAG00000018861) slc25a36a (ENSXMAG00000018866) ##22 spsb4a (ENSXMAG00000018887) ##23 clstn2a (ENSXMAG00000018890) ##24 NMNAT3 (ENSXMAG00000018929) rbp1.1 (ENSXMAG00000018933) copb2 (ENSXMAG00000018937) dvl3a (ENSXMAG00000018981) ap2m1a (ENSXMAG00000019001) pcyt1aa (ENSXMAG00000019014) and3 (ENSXMAG00000019029) DYNC1I2 (ENSXMAG00000019032) slc25a12 (ENSXMAG00000019058) metap1d (ENSXMAG00000019080) itga6b (ENSXMAG00000019094) itga6b (ENSXMAG00000024556) ENSXMAG00000019139 Oryzias ANCESTRAL SPECIES 12 ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Oryzias_b ANCESTRAL SPECIES 8 ENSGT00940000153649.A ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Indian medaka MODERN SPECIES 10 CHD7 (ENSOMEG00000016881) ptbp2b (ENSOMEG00000016950) dpydb (ENSOMEG00000017058) odr4 (ENSOMEG00000017193) ENSOMEG00000017267 prg4a (ENSOMEG00000017284) ENSOMEG00000017301 dusp12 (ENSOMEG00000017380) ENSOMEG00000017421 kifap3b (ENSOMEG00000017545) PDC (ENSOMEG00000017603) ENSOMEG00000017667 TIMM44 (ENSOMEG00000017767) rab11bb (ENSOMEG00000017806) MARCHF2 (ENSOMEG00000017834) slc25a36a (ENSOMEG00000017859) ##22 spsb4a (ENSOMEG00000017906) ##23 clstn2a (ENSOMEG00000017977) ##24 NMNAT3 (ENSOMEG00000018039) rbp1.1 (ENSOMEG00000018083) rbp2b (ENSOMEG00000018095) copb2 (ENSOMEG00000018165) dvl3a (ENSOMEG00000018321) ap2m1a (ENSOMEG00000018414) pcyt1aa (ENSOMEG00000018447) and3 (ENSOMEG00000018463) DYNC1I2 (ENSOMEG00000018565) slc25a12 (ENSOMEG00000018711) metap1d (ENSOMEG00000000484) itga6b (ENSOMEG00000018880) ENSOMEG00000018948 Javanese ricefish MODERN SPECIES 8 ca8 (ENSOJAG00000022960) rab2a (ENSOJAG00000022968) ptbp2b (ENSOJAG00000009624) odr4 (ENSOJAG00000011649) TPR (ENSOJAG00000011778) prg4a (ENSOJAG00000014427) dusp12 (ENSOJAG00000014454) OLFML2B (ENSOJAG00000014470) ENSOJAG00000014489 kifap3b (ENSOJAG00000014522) PDC (ENSOJAG00000014844) ENSOJAG00000014871 TIMM44 (ENSOJAG00000014954) rab11bb (ENSOJAG00000015481) MARCHF2 (ENSOJAG00000015558) slc25a36a (ENSOJAG00000015573) ##22 spsb4a (ENSOJAG00000015580) ##23 clstn2a (ENSOJAG00000015617) ##24 NMNAT3 (ENSOJAG00000016137) rbp1.1 (ENSOJAG00000016154) rbp2b (ENSOJAG00000016169) copb2 (ENSOJAG00000016214) dvl3a (ENSOJAG00000017146) ap2m1a (ENSOJAG00000017316) pcyt1aa (ENSOJAG00000017391) and3 (ENSOJAG00000017410) DYNC1I2 (ENSOJAG00000017447) slc25a12 (ENSOJAG00000018766) metap1d (ENSOJAG00000020200) itga6b (ENSOJAG00000020267) ENSOJAG00000020498 Oryzias_a ANCESTRAL SPECIES 7 ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Chinese medaka MODERN SPECIES 522 CHD7 (ENSOSIG00000012096) ptbp2b (ENSOSIG00000012898) dpydb (ENSOSIG00000017085) TPR (ENSOSIG00000017181) prg4a (ENSOSIG00000017475) dusp12 (ENSOSIG00000017483) OLFML2B (ENSOSIG00000017493) ENSOSIG00000017499 kifap3b (ENSOSIG00000017501) PDC (ENSOSIG00000017506) ENSOSIG00000017515 TIMM44 (ENSOSIG00000017570) ENSOSIG00000017572 rab11bb (ENSOSIG00000017577) MARCHF2 (ENSOSIG00000017579) slc25a36a (ENSOSIG00000017582) ##22 spsb4a (ENSOSIG00000017585) ##23 clstn2a (ENSOSIG00000017760) ##24 NMNAT3 (ENSOSIG00000020465) rbp1.1 (ENSOSIG00000020468) rbp2b (ENSOSIG00000020472) copb2 (ENSOSIG00000020483) dvl3a (ENSOSIG00000020491) ap2m1a (ENSOSIG00000020528) pcyt1aa (ENSOSIG00000020532) and3 (ENSOSIG00000020533) DYNC1I2 (ENSOSIG00000020580) slc25a12 (ENSOSIG00000022063) metap1d (ENSOSIG00000022361) itga6b (ENSOSIG00000022367) ENSOSIG00000022372 Japanese Medaka HdrR MODERN SPECIES 8 ptbp2b (ENSORLG00000013557) dpydb (ENSORLG00000013626) odr4 (ENSORLG00000013679) ENSORLG00000013763 prg4a (ENSORLG00000013785) dusp12 (ENSORLG00000013816) ENSORLG00000013860 ENSORLG00000024886 kifap3b (ENSORLG00000013884) pdca (ENSORLG00000013896) ENSORLG00000013903 ENSORLG00000026451 TIMM44 (ENSORLG00000013927) rab11bb (ENSORLG00000013938) ENSORLG00000013951 slc25a36a (ENSORLG00000013978) ##22 spsb4a (ENSORLG00000013981) ##23 ENSORLG00000026151 clstn2a (ENSORLG00000022231) ##24 rbp2b (ENSORLG00000028914) rbp1.1 (ENSORLG00000014005) copb2 (ENSORLG00000014074) dvl3a (ENSORLG00000014122) ap2m1a (ENSORLG00000014164) pcyt1aa (ENSORLG00000014200) and3 (ENSORLG00000014208) DYNC1I2 (ENSORLG00000014246) slc25a12 (ENSORLG00000014305) metap1d (ENSORLG00000014320) itga6b (ENSORLG00000014364) ENSORLG00000014379 Ovalentaria_B ANCESTRAL SPECIES 6 ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Cichlidae ANCESTRAL SPECIES 2 ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Pseudocrenilabrinae ANCESTRAL SPECIES 7 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 4 ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000181786 ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Haplochromini ANCESTRAL SPECIES 2 ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000181786 ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Burton s mouthbrooder MODERN SPECIES 306 ENSHBUG00000011494 ENSHBUG00000014224 pik3r2 (ENSHBUG00000014380) ifi30 (ENSHBUG00000014409) ENSHBUG00000014429 RAB3A (ENSHBUG00000014437) jund (ENSHBUG00000014447) pgpep1 (ENSHBUG00000000426) upf1 (ENSHBUG00000014694) ENSHBUG00000014718 HOMER3 (ENSHBUG00000014740) ENSHBUG00000014765 TIMM44 (ENSHBUG00000014769) rab11bb (ENSHBUG00000014777) MARCHF2 (ENSHBUG00000000436) slc25a36a (ENSHBUG00000014826) ##22 zgc:136870 (ENSHBUG00000014834) spsb4a (ENSHBUG00000014842) ##23 clstn2a (ENSHBUG00000014896) ##24 NMNAT3 (ENSHBUG00000014910) rbp1.1 (ENSHBUG00000014944) rbp2b (ENSHBUG00000014989) copb2 (ENSHBUG00000015177) dvl3a (ENSHBUG00000015268) ap2m1a (ENSHBUG00000015302) pcyt1aa (ENSHBUG00000015337) DYNC1I2 (ENSHBUG00000015379) slc25a12 (ENSHBUG00000000996) metap1d (ENSHBUG00000015543) itga6b (ENSHBUG00000000452) ENSHBUG00000015594 Haplochromini_A ANCESTRAL SPECIES 3 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b P. nyererei MODERN SPECIES 299 ENSPNYG00000003345 pik3r2 (ENSPNYG00000003416) ifi30 (ENSPNYG00000003489) ENSPNYG00000003518 ENSPNYG00000003553 RAB3A (ENSPNYG00000003624) jund (ENSPNYG00000003650) pgpep1 (ENSPNYG00000003672) upf1 (ENSPNYG00000003694) HOMER3 (ENSPNYG00000003778) ENSPNYG00000003807 uba52 (ENSPNYG00000003911) TIMM44 (ENSPNYG00000004070) rab11bb (ENSPNYG00000004098) MARCHF2 (ENSPNYG00000004130) slc25a36a (ENSPNYG00000004157) ##22 spsb4a (ENSPNYG00000004191) ##23 zgc:136870 (ENSPNYG00000004207) clstn2a (ENSPNYG00000004231) ##24 NMNAT3 (ENSPNYG00000004294) rbp1.1 (ENSPNYG00000004312) rbp2b (ENSPNYG00000004334) copb2 (ENSPNYG00000004364) dvl3a (ENSPNYG00000004421) ap2m1a (ENSPNYG00000004468) pcyt1aa (ENSPNYG00000004498) DYNC1I2 (ENSPNYG00000004520) slc25a12 (ENSPNYG00000004566) metap1d (ENSPNYG00000004632) itga6b (ENSPNYG00000004683) ENSPNYG00000004709 Haplochromini_B ANCESTRAL SPECIES 12 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000155442.o.a ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Eastern happy MODERN SPECIES 9 crtc1a (ENSACLG00000007997) ENSACLG00000007990 ENSACLG00000007576 pik3r2 (ENSACLG00000007541) ifi30 (ENSACLG00000007526) ENSACLG00000007240 RAB3A (ENSACLG00000007231) jund (ENSACLG00000007226) pgpep1 (ENSACLG00000007217) upf1 (ENSACLG00000007181) HOMER3 (ENSACLG00000007133) CERS4 (ENSACLG00000007099) TIMM44 (ENSACLG00000007080) rab11bb (ENSACLG00000007076) MARCHF2 (ENSACLG00000007071) slc25a36a (ENSACLG00000007062) ##22 zgc:136870 (ENSACLG00000007054) spsb4a (ENSACLG00000007040) ##23 clstn2a (ENSACLG00000006605) ##24 NMNAT3 (ENSACLG00000006594) rbp1.1 (ENSACLG00000006586) rbp2b (ENSACLG00000006428) copb2 (ENSACLG00000006378) dvl3a (ENSACLG00000006365) ap2m1a (ENSACLG00000006350) pcyt1aa (ENSACLG00000006334) DYNC1I2 (ENSACLG00000006306) slc25a12 (ENSACLG00000006243) metap1d (ENSACLG00000006206) itga6b (ENSACLG00000005796) ENSACLG00000005763 Zebra mbuna MODERN SPECIES 1100 ENSMZEG00005003826 ENSMZEG00005003753 pik3r2 (ENSMZEG00005003704) ifi30 (ENSMZEG00005003671) ENSMZEG00005003607 RAB3A (ENSMZEG00005003592) jund (ENSMZEG00005003568) pgpep1 (ENSMZEG00005003549) upf1 (ENSMZEG00005003489) HOMER3 (ENSMZEG00005003452) ENSMZEG00005003430 CERS4 (ENSMZEG00005003420) TIMM44 (ENSMZEG00005003361) rab11bb (ENSMZEG00005003352) MARCHF2 (ENSMZEG00005003339) slc25a36a (ENSMZEG00005003295) ##22 zgc:136870 (ENSMZEG00005003269) spsb4a (ENSMZEG00005003260) ##23 clstn2a (ENSMZEG00005003196) ##24 NMNAT3 (ENSMZEG00005003102) rbp1.1 (ENSMZEG00005003083) rbp2b (ENSMZEG00005002902) copb2 (ENSMZEG00005002832) dvl3a (ENSMZEG00005002747) ap2m1a (ENSMZEG00005002719) pcyt1aa (ENSMZEG00005002705) DYNC1I2 (ENSMZEG00005002671) slc25a12 (ENSMZEG00005002619) metap1d (ENSMZEG00005002593) itga6b (ENSMZEG00005002565) ENSMZEG00005002549 Lyretail cichlid MODERN SPECIES 300 ENSNBRG00000000988 pik3r2 (ENSNBRG00000000914) ifi30 (ENSNBRG00000000901) ENSNBRG00000000846 RAB3A (ENSNBRG00000000839) jund (ENSNBRG00000000825) pgpep1 (ENSNBRG00000000761) upf1 (ENSNBRG00000000670) ENSNBRG00000000632 HOMER3 (ENSNBRG00000000598) uba52 (ENSNBRG00000000583) CERS4 (ENSNBRG00000000500) TIMM44 (ENSNBRG00000000376) rab11bb (ENSNBRG00000000372) MARCHF2 (ENSNBRG00000000345) slc25a36a (ENSNBRG00000000318) ##22 zgc:136870 (ENSNBRG00000022923) spsb4a (ENSNBRG00000022916) ##23 clstn2a (ENSNBRG00000022882) ##24 NMNAT3 (ENSNBRG00000022863) rbp1.1 (ENSNBRG00000022813) rbp2b (ENSNBRG00000022801) copb2 (ENSNBRG00000022777) dvl3a (ENSNBRG00000022744) ap2m1a (ENSNBRG00000022722) pcyt1aa (ENSNBRG00000022706) DYNC1I2 (ENSNBRG00000022681) slc25a12 (ENSNBRG00000022645) metap1d (ENSNBRG00000022632) itga6b (ENSNBRG00000022386) ENSNBRG00000022303 Nile tilapia MODERN SPECIES 9 ENSONIG00000010487 ENSONIG00000010481 pik3r2 (ENSONIG00000010477) ifi30 (ENSONIG00000010474) ENSONIG00000010458 RAB3A (ENSONIG00000040136) jund (ENSONIG00000021437) pgpep1 (ENSONIG00000035992) upf1 (ENSONIG00000010452) HOMER3 (ENSONIG00000010448) ENSONIG00000031764 CERS4 (ENSONIG00000010441) TIMM44 (ENSONIG00000010437) ENSONIG00000035378 MARCHF2 (ENSONIG00000010434) slc25a36a (ENSONIG00000010432) ##22 spsb4a (ENSONIG00000010430) ##23 ENSONIG00000043177 zgc:136870 (ENSONIG00000010431) clstn2a (ENSONIG00000010418) ##24 NMNAT3 (ENSONIG00000033479) rbp2b (ENSONIG00000010410) copb2 (ENSONIG00000042202) dvl3a (ENSONIG00000010406) ap2m1a (ENSONIG00000010404) pcyt1aa (ENSONIG00000010401) DYNC1I2 (ENSONIG00000010393) slc25a12 (ENSONIG00000010386) metap1d (ENSONIG00000010384) itga6b (ENSONIG00000010374) ENSONIG00000010372 Midas cichlid MODERN SPECIES 235 pik3r2 (ENSACIG00000020433) IFI30 (ENSACIG00000020300) ENSACIG00000020265 RAB3A (ENSACIG00000020019) jund (ENSACIG00000020001) pgpep1 (ENSACIG00000019992) upf1 (ENSACIG00000019949) lzic (ENSACIG00000019942) HOMER3 (ENSACIG00000019924) uba52 (ENSACIG00000019707) ENSACIG00000019677 CTXN1 (ENSACIG00000019666) TIMM44 (ENSACIG00000019644) rab11bb (ENSACIG00000019631) MARCHF2 (ENSACIG00000019618) slc25a36a (ENSACIG00000019600) ##22 zgc:136870 (ENSACIG00000019585) spsb4a (ENSACIG00000019576) ##23 ENSACIG00000019567 clstn2a (ENSACIG00000019526) ##24 NMNAT3 (ENSACIG00000019503) rbp1.1 (ENSACIG00000019416) rbp2b (ENSACIG00000019401) copb2 (ENSACIG00000019369) dvl3a (ENSACIG00000019339) ap2m1a (ENSACIG00000019325) pcyt1aa (ENSACIG00000019309) ENSACIG00000019302 DYNC1I2 (ENSACIG00000019284) slc25a12 (ENSACIG00000019271) metap1d (ENSACIG00000019257) Pomacentridae ANCESTRAL SPECIES 6 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Pomacentridae_A ANCESTRAL SPECIES 18 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Amphiprion ANCESTRAL SPECIES 56 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Orange clownfish MODERN SPECIES 1 ENSAPEG00000016073 pik3r2 (ENSAPEG00000016119) ifi30 (ENSAPEG00000016204) ENSAPEG00000016224 RAB3A (ENSAPEG00000016297) jund (ENSAPEG00000016308) pgpep1 (ENSAPEG00000016314) upf1 (ENSAPEG00000016344) HOMER3 (ENSAPEG00000016482) uba52 (ENSAPEG00000016505) ENSAPEG00000016515 CTXN1 (ENSAPEG00000016527) TIMM44 (ENSAPEG00000016535) rab11bb (ENSAPEG00000016590) MARCHF2 (ENSAPEG00000016600) slc25a36a (ENSAPEG00000016623) ##22 spsb4a (ENSAPEG00000016656) ##23 zgc:136870 (ENSAPEG00000016668) clstn2a (ENSAPEG00000016707) ##24 NMNAT3 (ENSAPEG00000016768) rbp1.1 (ENSAPEG00000016783) rbp2b (ENSAPEG00000016791) copb2 (ENSAPEG00000016809) dvl3a (ENSAPEG00000016879) ap2m1a (ENSAPEG00000016947) pcyt1aa (ENSAPEG00000016980) and3 (ENSAPEG00000016994) DYNC1I2 (ENSAPEG00000017015) slc25a12 (ENSAPEG00000017081) metap1d (ENSAPEG00000017137) itga6b (ENSAPEG00000017165) Clown anemonefish MODERN SPECIES 694 pik3r2 (ENSAOCG00000001345) ifi30 (ENSAOCG00000018652) ENSAOCG00000018626 ENSAOCG00000001336 RAB3A (ENSAOCG00000018573) jund (ENSAOCG00000018564) pgpep1 (ENSAOCG00000018549) upf1 (ENSAOCG00000018519) HOMER3 (ENSAOCG00000018407) uba52 (ENSAOCG00000018365) ENSAOCG00000018339 CTXN1 (ENSAOCG00000018267) TIMM44 (ENSAOCG00000018254) rab11bb (ENSAOCG00000018239) MARCHF2 (ENSAOCG00000018227) slc25a36a (ENSAOCG00000018206) ##22 Spiny chromis MODERN SPECIES 158 myl1 (ENSAPOG00000024090) ENSAPOG00000024069 pik3r2 (ENSAPOG00000024009) ifi30 (ENSAPOG00000023955) ENSAPOG00000023917 RAB3A (ENSAPOG00000000673) jund (ENSAPOG00000023818) pgpep1 (ENSAPOG00000023806) upf1 (ENSAPOG00000023773) HOMER3 (ENSAPOG00000023680) ENSAPOG00000023625 CTXN1 (ENSAPOG00000023565) TIMM44 (ENSAPOG00000023542) rab11bb (ENSAPOG00000023455) MARCHF2 (ENSAPOG00000023418) slc25a36a (ENSAPOG00000023367) ##22 spsb4a (ENSAPOG00000023306) ##23 zgc:136870 (ENSAPOG00000023257) clstn2a (ENSAPOG00000023252) ##24 Bicolor damselfish MODERN SPECIES 1215 ENSSPAG00000011357 CTXN1 (ENSSPAG00000011381) TIMM44 (ENSSPAG00000011387) rab11bb (ENSSPAG00000011419) MARCHF2 (ENSSPAG00000011441) slc25a36a (ENSSPAG00000011459) ##22 spsb4a (ENSSPAG00000011489) ##23 zgc:136870 (ENSSPAG00000011499) pbdc1 (ENSSPAG00000011515) xpo7 (ENSSPAG00000011560) Percomorphaceae_C ANCESTRAL SPECIES 6 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT00990000206484 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Percomorphaceae_D ANCESTRAL SPECIES 6 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT00990000206484 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Anabantaria ANCESTRAL SPECIES 8 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Anabantoidei ANCESTRAL SPECIES 18 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Climbing perch MODERN SPECIES 8 ENSATEG00000018108 ENSATEG00000018067 pik3r2 (ENSATEG00000018016) ifi30 (ENSATEG00000017995) ENSATEG00000017963 ENSATEG00000016038 jund (ENSATEG00000017942) pgpep1 (ENSATEG00000017928) upf1 (ENSATEG00000017867) ENSATEG00000017747 ENSATEG00000017729 ENSATEG00000017721 TIMM44 (ENSATEG00000029811) rab11bb (ENSATEG00000017696) ENSATEG00000017679 ENSATEG00000017649 ##22 spsb4a (ENSATEG00000017626) ##23 zgc:136870 (ENSATEG00000025289) clstn2a (ENSATEG00000017562) ##24 NMNAT3 (ENSATEG00000017549) rbp1.1 (ENSATEG00000017531) rbp2b (ENSATEG00000017508) copb2 (ENSATEG00000017430) ENSATEG00000017381 ENSATEG00000017335 ENSATEG00000017306 ENSATEG00000017285 DYNC1I2 (ENSATEG00000017227) ENSATEG00000017182 METAP1D (ENSATEG00000017096) ENSATEG00000017036 Siamese fighting fish MODERN SPECIES 8 MED26 (ENSBSLG00000026361) crtc1a (ENSBSLG00000026358) ENSBSLG00000026355 ENSBSLG00000026340 pik3r2 (ENSBSLG00000026300) ifi30 (ENSBSLG00000026282) ENSBSLG00000026267 RAB3A (ENSBSLG00000026265) jund (ENSBSLG00000026263) upf1 (ENSBSLG00000026232) HOMER3 (ENSBSLG00000026184) CERS4 (ENSBSLG00000026180) TIMM44 (ENSBSLG00000026140) rab11bb (ENSBSLG00000026102) MARCHF2 (ENSBSLG00000026100) slc25a36a (ENSBSLG00000026093) ##22 spsb4a (ENSBSLG00000026084) ##23 clstn2a (ENSBSLG00000026017) ##24 NMNAT3 (ENSBSLG00000025789) rbp1.1 (ENSBSLG00000025786) rbp2b (ENSBSLG00000025784) copb2 (ENSBSLG00000025730) dvl3a (ENSBSLG00000025490) ap2m1a (ENSBSLG00000025307) pcyt1aa (ENSBSLG00000025304) and3 (ENSBSLG00000025301) DYNC1I2 (ENSBSLG00000025146) slc25a12 (ENSBSLG00000024692) metap1d (ENSBSLG00000024664) itga6b (ENSBSLG00000024452) ENSBSLG00000024401 Zig-zag eel MODERN SPECIES 8 ENSMAMG00000005957 pik3r2 (ENSMAMG00000005988) ifi30 (ENSMAMG00000006032) ENSMAMG00000006043 ENSMAMG00000006185 jund (ENSMAMG00000006203) pgpep1 (ENSMAMG00000006217) upf1 (ENSMAMG00000006229) ENSMAMG00000006299 uba52 (ENSMAMG00000006321) ENSMAMG00000006327 ENSMAMG00000006355 ENSMAMG00000006367 rab11bb (ENSMAMG00000006378) ENSMAMG00000006383 ENSMAMG00000024459 ##22 spsb4a (ENSMAMG00000006429) ##23 zgc:136870 (ENSMAMG00000006438) clstn2a (ENSMAMG00000006456) ##24 NMNAT3 (ENSMAMG00000006484) rbp1.1 (ENSMAMG00000006493) rbp2b (ENSMAMG00000006509) copb2 (ENSMAMG00000006528) ENSMAMG00000006605 ENSMAMG00000006654 ENSMAMG00000006685 ENSMAMG00000006711 DYNC1I2 (ENSMAMG00000006738) ENSMAMG00000006786 metap1d (ENSMAMG00000024396) itga6b (ENSMAMG00000006870) Carangaria ANCESTRAL SPECIES 5 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Pleuronectoidei ANCESTRAL SPECIES 1 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT00990000206484 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Turbot MODERN SPECIES 19 ENSSMAG00000005337 ENSSMAG00000005306 pik3r2 (ENSSMAG00000005255) ifi30 (ENSSMAG00000005240) ENSSMAG00000005152 ENSSMAG00000005141 jund (ENSSMAG00000005129) pgpep1 (ENSSMAG00000005111) upf1 (ENSSMAG00000005055) ENSSMAG00000005036 ENSSMAG00000004963 ENSSMAG00000004955 ENSSMAG00000004929 rab11bb (ENSSMAG00000004922) ENSSMAG00000004909 slc25a36a (ENSSMAG00000004893) ##22 ENSSMAG00000004876 spsb4a (ENSSMAG00000004857) ##23 clstn2a (ENSSMAG00000004743) ##24 NMNAT3 (ENSSMAG00000022760) rbp1.1 (ENSSMAG00000004704) rbp2b (ENSSMAG00000020703) copb2 (ENSSMAG00000004635) dvl3a (ENSSMAG00000004618) ENSSMAG00000004560 ENSSMAG00000004543 ENSSMAG00000004527 DYNC1I2 (ENSSMAG00000004501) ENSSMAG00000004437 metap1d (ENSSMAG00000004402) itga6b (ENSSMAG00000004319) Tongue sole MODERN SPECIES 12 mrpl34 (ENSCSEG00000011848) ABHD8 (ENSCSEG00000011834) ENSCSEG00000011867 st3gal3b (ENSCSEG00000011962) ENSCSEG00000012026 ptger4c (ENSCSEG00000012031) pif1 (ENSCSEG00000012036) ENSCSEG00000012053 nsun4 (ENSCSEG00000012057) dmbx1a (ENSCSEG00000012068) ENSCSEG00000012095 CTXN1 (ENSCSEG00000012121) TIMM44 (ENSCSEG00000012127) rab11bb (ENSCSEG00000012149) MARCHF2 (ENSCSEG00000012156) slc25a36a (ENSCSEG00000012199) ##22 spsb4a (ENSCSEG00000012242) ##23 clstn2a (ENSCSEG00000012265) ##24 NMNAT3 (ENSCSEG00000012360) rbp1.1 (ENSCSEG00000012366) copb2 (ENSCSEG00000012387) dvl3a (ENSCSEG00000012425) ap2m1a (ENSCSEG00000012443) pcyt1a (ENSCSEG00000013124) and3 (ENSCSEG00000013163) DYNC1I2 (ENSCSEG00000013179) slc25a12 (ENSCSEG00000013220) metap1d (ENSCSEG00000013260) itga6b (ENSCSEG00000013305) ENSCSEG00000013346 ENSCSEG00000013353 Carangaria_A ANCESTRAL SPECIES 2 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Seriola ANCESTRAL SPECIES ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Greater amberjack MODERN SPECIES 83 MAST3 (ENSSDUG00000012940) pik3r2 (ENSSDUG00000013068) ifi30 (ENSSDUG00000013153) ENSSDUG00000013184 RAB3A (ENSSDUG00000013259) jund (ENSSDUG00000013277) pgpep1 (ENSSDUG00000013291) upf1 (ENSSDUG00000013320) HOMER3 (ENSSDUG00000013419) uba52 (ENSSDUG00000013436) CERS4 (ENSSDUG00000013462) CTXN1 (ENSSDUG00000013526) TIMM44 (ENSSDUG00000013532) rab11bb (ENSSDUG00000013558) MARCHF2 (ENSSDUG00000013566) slc25a36a (ENSSDUG00000013585) ##22 spsb4a (ENSSDUG00000013610) ##23 zgc:136870 (ENSSDUG00000013620) clstn2a (ENSSDUG00000013636) ##24 NMNAT3 (ENSSDUG00000013697) rbp1.1 (ENSSDUG00000013706) rbp2b (ENSSDUG00000013743) copb2 (ENSSDUG00000013764) dvl3a (ENSSDUG00000013838) ap2m1a (ENSSDUG00000013877) pcyt1aa (ENSSDUG00000013919) and3 (ENSSDUG00000013946) DYNC1I2 (ENSSDUG00000013954) slc25a12 (ENSSDUG00000014017) metap1d (ENSSDUG00000014092) itga6b (ENSSDUG00000014125) Yellowtail amberjack MODERN SPECIES 3160 MAST3 (ENSSLDG00000021107) pik3r2 (ENSSLDG00000021025) ifi30 (ENSSLDG00000021006) ENSSLDG00000020948 RAB3A (ENSSLDG00000020924) jund (ENSSLDG00000020919) pgpep1 (ENSSLDG00000020900) upf1 (ENSSLDG00000020868) HOMER3 (ENSSLDG00000020840) uba52 (ENSSLDG00000020739) CERS4 (ENSSLDG00000020711) CTXN1 (ENSSLDG00000020704) TIMM44 (ENSSLDG00000020686) rab11bb (ENSSLDG00000020676) MARCHF2 (ENSSLDG00000020670) slc25a36a (ENSSLDG00000020649) ##22 zgc:136870 (ENSSLDG00000020640) spsb4a (ENSSLDG00000020633) ##23 clstn2a (ENSSLDG00000020561) ##24 NMNAT3 (ENSSLDG00000020535) rbp1.1 (ENSSLDG00000020526) rbp2b (ENSSLDG00000020513) copb2 (ENSSLDG00000020433) ENSSLDG00000020405 dvl3a (ENSSLDG00000020388) ap2m1a (ENSSLDG00000020332) pcyt1aa (ENSSLDG00000020304) and3 (ENSSLDG00000020294) DYNC1I2 (ENSSLDG00000020217) slc25a12 (ENSSLDG00000020138) metap1d (ENSSLDG00000020116) Barramundi perch MODERN SPECIES 69 MAST3 (ENSLCAG00010021565) pik3r2 (ENSLCAG00010021561) ifi30 (ENSLCAG00010021559) ENSLCAG00010021553 RAB3A (ENSLCAG00010021537) jund (ENSLCAG00010021531) pgpep1 (ENSLCAG00010021529) upf1 (ENSLCAG00010021515) HOMER3 (ENSLCAG00010021508) uba52 (ENSLCAG00010021500) CERS4 (ENSLCAG00010021499) CTXN1 (ENSLCAG00010021496) TIMM44 (ENSLCAG00010021394) rab11bb (ENSLCAG00010021340) MARCHF2 (ENSLCAG00010021331) slc25a36a (ENSLCAG00010021326) ##22 zgc:136870 (ENSLCAG00010021318) spsb4a (ENSLCAG00010021315) ##23 clstn2a (ENSLCAG00010021304) ##24 NMNAT3 (ENSLCAG00010021301) rbp1.1 (ENSLCAG00010021298) rbp2b (ENSLCAG00010021293) copb2 (ENSLCAG00010020835) dvl3a (ENSLCAG00010020676) ap2m1a (ENSLCAG00010020671) pcyt1aa (ENSLCAG00010020649) and3 (ENSLCAG00010020638) DYNC1I2 (ENSLCAG00010020244) slc25a12 (ENSLCAG00010020138) metap1d (ENSLCAG00010020111) itga6b (ENSLCAG00010019951) Eupercaria ANCESTRAL SPECIES 22 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT00990000206484 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Tetraodontidae ANCESTRAL SPECIES 13 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT00990000206484 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Tetraodon MODERN SPECIES 6 crtc1a (ENSTNIG00000011067) ENSTNIG00000011068 MAST3 (ENSTNIG00000011069) pik3r2 (ENSTNIG00000011070) ifi30 (ENSTNIG00000011071) ENSTNIG00000011072 RAB3A (ENSTNIG00000011073) pgpep1 (ENSTNIG00000011075) upf1 (ENSTNIG00000011076) HOMER3 (ENSTNIG00000011077) ENSTNIG00000011078 CTXN1 (ENSTNIG00000011079) TIMM44 (ENSTNIG00000011080) rab11bb (ENSTNIG00000011081) MARCHF2 (ENSTNIG00000011082) slc25a36a (ENSTNIG00000011083) ##22 spsb4a (ENSTNIG00000011084) ##23 clstn2a (ENSTNIG00000011085) ##24 NMNAT3 (ENSTNIG00000011086) copb2 (ENSTNIG00000011087) dvl3a (ENSTNIG00000011088) ap2m1a (ENSTNIG00000011089) pcyt1aa (ENSTNIG00000011090) and3 (ENSTNIG00000011091) DYNC1I2 (ENSTNIG00000011092) slc25a12 (ENSTNIG00000011093) metap1d (ENSTNIG00000011094) itga6b (ENSTNIG00000011095) rapgef4b (ENSTNIG00000011096) ENSTNIG00000011097 ENSTNIG00000011098 Fugu MODERN SPECIES 14 ENSTRUG00000031956 MAST3 (ENSTRUG00000010313) pik3r2 (ENSTRUG00000010476) ifi30 (ENSTRUG00000010959) ENSTRUG00000011028 RAB3A (ENSTRUG00000011189) jund (ENSTRUG00000024983) pgpep1 (ENSTRUG00000026311) upf1 (ENSTRUG00000000150) HOMER3 (ENSTRUG00000000171) ENSTRUG00000000191 CTXN1 (ENSTRUG00000000204) TIMM44 (ENSTRUG00000000206) rab11bb (ENSTRUG00000033264) MARCHF2 (ENSTRUG00000000243) slc25a36a (ENSTRUG00000000258) ##22 ENSTRUG00000000285 spsb4a (ENSTRUG00000023923) ##23 clstn2a (ENSTRUG00000000290) ##24 NMNAT3 (ENSTRUG00000000361) rbp1.1 (ENSTRUG00000000390) copb2 (ENSTRUG00000000411) dvl3a (ENSTRUG00000000483) ap2m1a (ENSTRUG00000000587) pcyt1aa (ENSTRUG00000000674) and3 (ENSTRUG00000025029) ENSTRUG00000000748 slc25a12 (ENSTRUG00000000852) ENSTRUG00000001321 ENSTRUG00000002461 rapgef4b (ENSTRUG00000002566) Eupecaria_A ANCESTRAL SPECIES 8 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 218 ENSLBEG00000014147 ENSLBEG00000014236 pik3r2 (ENSLBEG00000014394) ifi30 (ENSLBEG00000014482) ENSLBEG00000014543 RAB3A (ENSLBEG00000014792) jund (ENSLBEG00000014823) pgpep1 (ENSLBEG00000014837) upf1 (ENSLBEG00000014862) HOMER3 (ENSLBEG00000014982) ENSLBEG00000015169 CTXN1 (ENSLBEG00000015199) TIMM44 (ENSLBEG00000015213) rab11bb (ENSLBEG00000015248) MARCHF2 (ENSLBEG00000015279) slc25a36a (ENSLBEG00000015309) ##22 spsb4a (ENSLBEG00000015356) ##23 zgc:136870 (ENSLBEG00000015372) clstn2a (ENSLBEG00000015393) ##24 NMNAT3 (ENSLBEG00000015448) rbp1.1 (ENSLBEG00000015461) rbp2b (ENSLBEG00000015473) copb2 (ENSLBEG00000015514) dvl3a (ENSLBEG00000015569) ENSLBEG00000015680 Ballan wrasse MODERN SPECIES 3984 MARCHF2 (ENSLBEG00000001901) ENSLBEG00000001883 ##22 Eupecaria_B ANCESTRAL SPECIES 8 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Perciformes ANCESTRAL SPECIES 5 ENSGT00940000157166.d.b ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.f ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Cottioidei ANCESTRAL SPECIES 15 ENSGT00940000157166.d.b ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.f ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Lumpfish MODERN SPECIES 8 pik3r2 (ENSCLMG00005009644) ifi30 (ENSCLMG00005009629) ENSCLMG00005009477 RAB3A (ENSCLMG00005009473) jund (ENSCLMG00005009472) pgpep1 (ENSCLMG00005009453) upf1 (ENSCLMG00005009276) ENSCLMG00005009267 ENSCLMG00005009265 uba52 (ENSCLMG00005009262) CERS4 (ENSCLMG00005009260) CTXN1 (ENSCLMG00005009257) TIMM44 (ENSCLMG00005009244) rab11bb (ENSCLMG00005009159) MARCHF2 (ENSCLMG00005009155) slc25a36a (ENSCLMG00005009154) ##22 spsb4a (ENSCLMG00005009153) ##23 clstn2a (ENSCLMG00005009148) ##24 NMNAT3 (ENSCLMG00005009145) rbp1.1 (ENSCLMG00005009141) rbp2b (ENSCLMG00005009140) copb2 (ENSCLMG00005008047) dvl3a (ENSCLMG00005007983) ap2m1a (ENSCLMG00005007959) pcyt1aa (ENSCLMG00005007903) and3 (ENSCLMG00005007900) DYNC1I2 (ENSCLMG00005007699) SLC25A12 (ENSCLMG00005002153) metap1d (ENSCLMG00005002132) ITGA6 (ENSCLMG00005001716) rapgef4b (ENSCLMG00005008934) Stickleback MODERN SPECIES 2 ENSGACG00000015527 MAST3 (ENSGACG00000015523) pik3r2 (ENSGACG00000015520) ifi30 (ENSGACG00000015519) ENSGACG00000015515 RAB3A (ENSGACG00000015513) jund (ENSGACG00000015511) pgpep1 (ENSGACG00000015509) upf1 (ENSGACG00000015504) ENSGACG00000015501 CERS4 (ENSGACG00000015496) ENSGACG00000015495 TIMM44 (ENSGACG00000015487) rab11bb (ENSGACG00000015479) MARCHF2 (ENSGACG00000015477) slc25a36a (ENSGACG00000015473) ##22 spsb4a (ENSGACG00000015471) ##23 clstn2a (ENSGACG00000015468) ##24 NMNAT3 (ENSGACG00000015460) copb2 (ENSGACG00000015455) dvl3a (ENSGACG00000015451) ap2m1a (ENSGACG00000015444) pcyt1aa (ENSGACG00000015442) and3 (ENSGACG00000015438) DYNC1I2 (ENSGACG00000015431) slc25a12 (ENSGACG00000015426) metap1d (ENSGACG00000015425) itga6b (ENSGACG00000015418) ENSGACG00000015416 ENSGACG00000015414 rapgef4b (ENSGACG00000015410) Perciformes_a ANCESTRAL SPECIES 17 ENSGT00940000157166.d.b ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.f ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b ENSGT00940000164127.b Pike perch MODERN SPECIES 55 ENSSLUG00000005443 MAST3 (ENSSLUG00000005343) pik3r2 (ENSSLUG00000004691) ifi30 (ENSSLUG00000004635) ENSSLUG00000004338 RAB3A (ENSSLUG00000004254) jund (ENSSLUG00000004248) pgpep1 (ENSSLUG00000004242) upf1 (ENSSLUG00000004153) HOMER3 (ENSSLUG00000004119) ENSSLUG00000004097 CTXN1 (ENSSLUG00000004074) TIMM44 (ENSSLUG00000003631) rab11bb (ENSSLUG00000003397) MARCHF2 (ENSSLUG00000003365) slc25a36a (ENSSLUG00000003329) ##22 spsb4a (ENSSLUG00000003305) ##23 clstn2a (ENSSLUG00000001936) ##24 NMNAT3 (ENSSLUG00000001488) rbp1.1 (ENSSLUG00000001482) rbp2b (ENSSLUG00000024153) copb2 (ENSSLUG00000023763) dvl3a (ENSSLUG00000023682) ap2m1a (ENSSLUG00000023669) pcyt1aa (ENSSLUG00000023650) and3 (ENSSLUG00000023638) DYNC1I2 (ENSSLUG00000021578) slc25a12 (ENSSLUG00000019402) metap1d (ENSSLUG00000019296) ENSSLUG00000018774 rapgef4b (ENSSLUG00000018395) Channel bull blenny MODERN SPECIES 8 ENSCGOG00000018385 pik3r2 (ENSCGOG00000017734) ifi30 (ENSCGOG00000017696) ENSCGOG00000015645 jund (ENSCGOG00000015574) RAB3A (ENSCGOG00000015547) pgpep1 (ENSCGOG00000015544) upf1 (ENSCGOG00000015291) HOMER3 (ENSCGOG00000015280) uba52 (ENSCGOG00000015279) ENSCGOG00000015260 CTXN1 (ENSCGOG00000015256) TIMM44 (ENSCGOG00000014872) rab11bb (ENSCGOG00000014861) MARCHF2 (ENSCGOG00000014860) slc25a36a (ENSCGOG00000014854) ##22 spsb4a (ENSCGOG00000014851) ##23 clstn2a (ENSCGOG00000014188) ##24 NMNAT3 (ENSCGOG00000014162) rbp1.1 (ENSCGOG00000014153) rbp2b (ENSCGOG00000014126) copb2 (ENSCGOG00000013176) dvl3a (ENSCGOG00000012594) ap2m1a (ENSCGOG00000012546) pcyt1aa (ENSCGOG00000012307) and3 (ENSCGOG00000012296) ENSCGOG00000010097 slc25a12 (ENSCGOG00000022233) metap1d (ENSCGOG00000022166) ITGA6 (ENSCGOG00000021796) ENSCGOG00000021769 Eupecaria_C ANCESTRAL SPECIES 10 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Gilthead seabream MODERN SPECIES 13 pard3ab (ENSSAUG00010023401) NRP1 (ENSSAUG00010023216) itgb1b (ENSSAUG00010019402) ENSSAUG00010019344 ENSSAUG00010019339 ENSSAUG00010019336 ENSSAUG00010019331 arhgap12b (ENSSAUG00010016958) ENSSAUG00010016918 KIF5B (ENSSAUG00010013793) pold3 (ENSSAUG00010013750) ENSSAUG00010013200 CTXN1 (ENSSAUG00010013180) rab11bb (ENSSAUG00010013144) TIMM44 (ENSSAUG00010012552) slc25a36a (ENSSAUG00010012537) ##22 spsb4a (ENSSAUG00010012534) ##23 clstn2a (ENSSAUG00010027604) ##24 NMNAT3 (ENSSAUG00010027602) rbp1.1 (ENSSAUG00010027601) rbp2b (ENSSAUG00010027600) copb2 (ENSSAUG00010027590) dvl3a (ENSSAUG00010027548) ap2m1a (ENSSAUG00010027545) pcyt1aa (ENSSAUG00010027543) and3 (ENSSAUG00010027542) DYNC1I2 (ENSSAUG00010027523) slc25a12 (ENSSAUG00010027446) metap1d (ENSSAUG00010027416) itga6b (ENSSAUG00010027382) ENSSAUG00010027365 Eupercaria_incertae_sedis ANCESTRAL SPECIES 8 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b Large yellow croaker MODERN SPECIES 483 ENSLCRG00005023658 pik3r2 (ENSLCRG00005023647) ifi30 (ENSLCRG00005023645) ENSLCRG00005023641 RAB3A (ENSLCRG00005023639) jund (ENSLCRG00005023638) pgpep1 (ENSLCRG00005023637) upf1 (ENSLCRG00005023597) HOMER3 (ENSLCRG00005023593) uba52 (ENSLCRG00005023591) ENSLCRG00005023590 ENSLCRG00005023589 TIMM44 (ENSLCRG00005023576) rab11bb (ENSLCRG00005023575) MARCHF2 (ENSLCRG00005023574) slc25a36a (ENSLCRG00005023573) ##22 zgc:136870 (ENSLCRG00005023572) spsb4a (ENSLCRG00005023571) ##23 clstn2a (ENSLCRG00005023521) ##24 NMNAT3 (ENSLCRG00005023515) rbp1.1 (ENSLCRG00005023514) rbp2b (ENSLCRG00005023513) copb2 (ENSLCRG00005023427) dvl3a (ENSLCRG00005023423) ap2m1a (ENSLCRG00005023420) pcyt1aa (ENSLCRG00005023416) and3 (ENSLCRG00005023413) DYNC1I2 (ENSLCRG00005022746) slc25a12 (ENSLCRG00005022120) metap1d (ENSLCRG00005022102) itga6b (ENSLCRG00005021995) European seabass MODERN SPECIES crtc1a (ENSDLAG00005011972) ENSDLAG00005002544 ENSDLAG00005002659 pik3r2 (ENSDLAG00005003340) ifi30 (ENSDLAG00005003806) ENSDLAG00005003922 ENSDLAG00005026750 jund (ENSDLAG00005033524) upf1 (ENSDLAG00005005647) ENSDLAG00005006531 ENSDLAG00005006568 ENSDLAG00005006586 ENSDLAG00005031877 rab11bb (ENSDLAG00005006977) ENSDLAG00005007195 ENSDLAG00005007214 ##22 spsb4a (ENSDLAG00005007295) ##23 zgc:136870 (ENSDLAG00005007302) clstn2a (ENSDLAG00005007311) ##24 NMNAT3 (ENSDLAG00005007373) rbp1.1 (ENSDLAG00005027822) rbp2b (ENSDLAG00005007381) copb2 (ENSDLAG00005007428) ENSDLAG00005008457 ENSDLAG00005008772 ENSDLAG00005008795 ENSDLAG00005008952 DYNC1I2 (ENSDLAG00005009088) ENSDLAG00005012453 metap1d (ENSDLAG00005014493) itga6b (ENSDLAG00005014588) Tiger tail seahorse MODERN SPECIES 377 si:dkey-56i24.1 (ENSHCOG00000001857) ENSHCOG00000001877 pik3r2 (ENSHCOG00000001948) ifi30 (ENSHCOG00000001984) ENSHCOG00000002081 RAB3A (ENSHCOG00000002125) jund (ENSHCOG00000002134) ENSHCOG00000002184 ENSHCOG00000002352 CTXN1 (ENSHCOG00000002404) rab11bb (ENSHCOG00000002423) MARCHF2 (ENSHCOG00000002433) slc25a36a (ENSHCOG00000002442) ##22 spsb4a (ENSHCOG00000002448) ##23 clstn2a (ENSHCOG00000002473) ##24 NMNAT3 (ENSHCOG00000002482) rbp1.1 (ENSHCOG00000000700) Pinecone sodierfish MODERN SPECIES 8 MAST3 (ENSMMDG00005014384) pik3r2 (ENSMMDG00005014416) ifi30 (ENSMMDG00005015289) ENSMMDG00005015290 RAB3A (ENSMMDG00005015295) jund (ENSMMDG00005015297) pgpep1 (ENSMMDG00005015307) upf1 (ENSMMDG00005015515) HOMER3 (ENSMMDG00005016621) uba52 (ENSMMDG00005016682) ENSMMDG00005016688 CTXN1 (ENSMMDG00005016693) TIMM44 (ENSMMDG00005016705) rab11bb (ENSMMDG00005016770) MARCHF2 (ENSMMDG00005016775) slc25a36a (ENSMMDG00005016779) ##22 spsb4a (ENSMMDG00005016781) ##23 zgc:136870 (ENSMMDG00005016783) clstn2a (ENSMMDG00005016797) ##24 ENSMMDG00005016891 NMNAT3 (ENSMMDG00005016893) rbp1.1 (ENSMMDG00005016895) rbp2b (ENSMMDG00005016897) copb2 (ENSMMDG00005016919) dvl3a (ENSMMDG00005018119) ap2m1a (ENSMMDG00005018230) pcyt1aa (ENSMMDG00005018238) and3 (ENSMMDG00005018246) DYNC1I2 (ENSMMDG00005018308) slc25a12 (ENSMMDG00005021392) metap1d (ENSMMDG00005021571) Cod MODERN SPECIES 21 crtc1a (ENSGMOG00000010220) ENSGMOG00000027994 pik3r2 (ENSGMOG00000010166) ifi30 (ENSGMOG00000010157) ENSGMOG00000000694 ENSGMOG00000000685 ENSGMOG00000000668 ENSGMOG00000024170 ENSGMOG00000018197 ENSGMOG00000010623 ENSGMOG00000027799 ENSGMOG00000028248 ENSGMOG00000031425 ENSGMOG00000009211 ENSGMOG00000009200 slc25a36a (ENSGMOG00000023978) ##22 spsb4a (ENSGMOG00000034486) ##23 clstn2a (ENSGMOG00000009159) ##24 NMNAT3 (ENSGMOG00000007890) rbp1.1 (ENSGMOG00000026517) rbp2b (ENSGMOG00000035830) copb2 (ENSGMOG00000007877) ENSGMOG00000007864 ENSGMOG00000007857 ENSGMOG00000007851 ENSGMOG00000025298 DYNC1I2 (ENSGMOG00000018897) ENSGMOG00000018887 metap1d (ENSGMOG00000018879) itga6b (ENSGMOG00000018855) ENSGMOG00000033645 Protacanthopterygii ANCESTRAL SPECIES 60 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.a.a ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a ENSGT00940000158995.b ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000161729.m.a ENSGT00390000011725.d ENSGT00940000153655.A.b ENSGT00390000011127.d ENSGT00390000016906.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 83 ENSGT00940000157166.d.d ENSGT00940000157050.i.a.d ENSGT00940000164804.a.e ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e ENSGT00940000158959.a.a.a.a ENSGT00940000162806.b.a.g ENSGT00390000015368.a.a.c.h ENSGT00940000157413.h.b ENSGT00940000158081.o.b.c ENSGT00940000153593.e.b.g.a ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b.b ENSGT00940000163126.a.a.c ENSGT00940000158995.b.a ENSGT00940000154369.g.a.g ##22 ENSGT01030000234629.C.a.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b.c ##24 ENSGT00940000159675.b ENSGT00940000160165.b ENSGT00900000141083.c.a.b ENSGT00950000182903.a.a.d.f ENSGT00940000159223.d.b ENSGT00940000157384.a.c ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y ENSGT00390000011127.d.c ENSGT00990000213680 ENSGT00940000174564.f Salmoninae_a ANCESTRAL SPECIES 2 ENSGT00940000157166.d.d ENSGT00940000157050.i.a.d ENSGT00940000164804.a.e ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e ENSGT00940000158959.a.a.a.a ENSGT00940000162806.b.a.g ENSGT00390000015368.a.a.c.h ENSGT00940000157413.h.b ENSGT00940000158081.o.b.c ENSGT00940000153593.e.b.g.b.b.a ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b.b ENSGT00940000163126.a.a.c ENSGT00940000158995.b.a ENSGT00940000154369.g.a.g ##22 ENSGT01030000234629.C.a.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b.c ##24 ENSGT00940000159675.b ENSGT00940000160165.b ENSGT00900000141083.c.a.b ENSGT00950000182903.a.a.d.f ENSGT00940000159223.d.b ENSGT00940000157384.a.c ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y ENSGT00390000011127.d.c ENSGT00990000213680 ENSGT00940000174564.f Oncorhynchus ANCESTRAL SPECIES 11 ENSGT00940000157166.d.d ENSGT00940000157050.i.a.d ENSGT00940000164804.a.e ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e ENSGT00940000158959.a.a.a.a ENSGT00940000162806.b.a.g ENSGT00390000015368.a.a.c.h ENSGT00940000157413.h.b ENSGT00940000158081.o.b.c ENSGT00940000153593.f ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b.b ENSGT00940000163126.a.a.c ENSGT00940000158995.b.a ENSGT00940000154369.g.a.g ##22 ENSGT01030000234629.C.a.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b.c ##24 ENSGT00940000159675.b ENSGT00940000160165.b ENSGT00900000141083.c.a.b ENSGT00950000182903.a.a.d.f ENSGT00940000159223.d.b ENSGT00940000157384.a.c ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y ENSGT00390000011127.d.c ENSGT00940000174564.f ENSGT00940000157030.c.a.e Oncorhynchus_a ANCESTRAL SPECIES 37 ENSGT00940000157166.d.d ENSGT00940000157050.i.a.d ENSGT00940000164804.a.e ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e ENSGT00940000158959.a.a.a.a ENSGT00940000162806.b.a.g ENSGT00390000015368.a.a.c.h ENSGT00940000157413.h.b ENSGT00940000158081.o.b.c ENSGT00940000153593.e.b.g.b.b.a ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b.b ENSGT00940000163126.a.a.c ENSGT00940000158995.b.a ENSGT00940000154369.g.a.g ##22 ENSGT01030000234629.C.a.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b.c ##24 ENSGT00940000159675.b ENSGT00940000160165.b ENSGT00900000141083.c.a.b ENSGT00950000182903.a.a.d.f ENSGT00940000159223.d.b ENSGT00940000157384.a.c ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y ENSGT00390000011127.d.c ENSGT00940000174564.f ENSGT00940000157030.c.a.e Chinook salmon MODERN SPECIES 1 MAST3 (ENSOTSG00005031247) pik3r2 (ENSOTSG00005031258) ifi30 (ENSOTSG00005032065) mpv17l2 (ENSOTSG00005032066) ENSOTSG00005032068 RAB3A (ENSOTSG00005032072) jund (ENSOTSG00005032073) pgpep1 (ENSOTSG00005032074) upf1 (ENSOTSG00005032079) HOMER3 (ENSOTSG00005032705) uba52 (ENSOTSG00005032711) ENSOTSG00005032740 TIMM44 (ENSOTSG00005032758) rab11bb (ENSOTSG00005034280) MARCHF2 (ENSOTSG00005034282) slc25a36a (ENSOTSG00005034288) ##22 spsb4a (ENSOTSG00005034296) ##23 zgc:136870 (ENSOTSG00005034297) clstn2a (ENSOTSG00005034298) ##24 rbp1.1 (ENSOTSG00005034697) rbp2b (ENSOTSG00005034699) copb2 (ENSOTSG00005034708) DVL3 (ENSOTSG00005035208) AP2M1 (ENSOTSG00005035211) pcyt1aa (ENSOTSG00005035227) SERP1 (ENSOTSG00005035228) selenot1a (ENSOTSG00005035229) zgc:153615 (ENSOTSG00005035230) ENSOTSG00005035231 ppm1la (ENSOTSG00005035232) otol1a (ENSOTSG00005035233) Coho salmon MODERN SPECIES 23 crtc1a (ENSOKIG00005032750) ENSOKIG00005032770 pik3r2 (ENSOKIG00005032870) ifi30 (ENSOKIG00005032978) mpv17l2 (ENSOKIG00005033005) ENSOKIG00005033039 jund (ENSOKIG00005033465) pgpep1 (ENSOKIG00005033478) upf1 (ENSOKIG00005033533) HOMER3 (ENSOKIG00005034071) uba52 (ENSOKIG00005034082) ENSOKIG00005034115 TIMM44 (ENSOKIG00005034165) rab11bb (ENSOKIG00005034516) MARCHF2 (ENSOKIG00005034573) slc25a36a (ENSOKIG00005034598) ##22 spsb4a (ENSOKIG00005034605) ##23 ENSOKIG00005034614 clstn2a (ENSOKIG00005034701) ##24 rbp1.1 (ENSOKIG00005035895) ENSOKIG00005035958 DVL3 (ENSOKIG00005036594) AP2M1 (ENSOKIG00005036681) pcyt1aa (ENSOKIG00005036745) SERP1 (ENSOKIG00005036785) ENSOKIG00005036801 selenot1a (ENSOKIG00005036806) zgc:153615 (ENSOKIG00005036820) ENSOKIG00005036839 PPM1L (ENSOKIG00005036858) otol1a (ENSOKIG00005036876) Rainbow trout MODERN SPECIES 29 pik3r2 (ENSOMYG00000001470) ifi30 (ENSOMYG00000001539) mpv17l2 (ENSOMYG00000001579) ENSOMYG00000001762 ENSOMYG00000001849 jund (ENSOMYG00000001855) pgpep1 (ENSOMYG00000001889) upf1 (ENSOMYG00000002069) ENSOMYG00000002121 uba52 (ENSOMYG00000002136) ENSOMYG00000002163 ENSOMYG00000076562 ENSOMYG00000002736 rb11a (ENSOMYG00000003016) ENSOMYG00000073077 slc25a36a (ENSOMYG00000003050) ##22 spsb4a (ENSOMYG00000003071) ##23 clstn2a (ENSOMYG00000003476) ##24 rbp1 (ENSOMYG00000068944) copb2 (ENSOMYG00000004282) ENSOMYG00000004665 ap2m1 (ENSOMYG00000004709) pcyt1aa (ENSOMYG00000004765) ENSOMYG00000058103 ENSOMYG00000076782 selenot1a (ENSOMYG00000004828) zgc:153615 (ENSOMYG00000004856) ENSOMYG00000069296 ENSOMYG00000004891 ENSOMYG00000004921 ENSOMYG00000005000 Salmo ANCESTRAL SPECIES 35 ENSGT00940000157166.d.d ENSGT00940000157050.i.a.d ENSGT00940000164804.a.e ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e ENSGT00940000158959.a.a.a.a ENSGT00940000162806.b.a.g ENSGT00390000015368.a.a.c.h ENSGT00940000157413.h.b ENSGT00940000158081.o.b.c ENSGT00940000153593.e.b.g.b.b.a ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b.b ENSGT00940000163126.a.a.c ENSGT00940000158995.b.a ENSGT00940000154369.g.a.g ##22 ENSGT01030000234629.C.a.a ##23 ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b.c ##24 ENSGT00990000213390 ENSGT00940000159675.b ENSGT00940000160165.b ENSGT00900000141083.c.a.b ENSGT00950000182903.a.a.d.f ENSGT00940000159223.d.b ENSGT00940000157384.a.c ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y ENSGT00390000011127.d.c ENSGT00990000213680 River trout MODERN SPECIES 13 MAST3 (ENSSTUG00000045055) pik3r2 (ENSSTUG00000045156) ifi30 (ENSSTUG00000045291) mpv17l2 (ENSSTUG00000045307) ENSSTUG00000045342 RAB3A (ENSSTUG00000045399) jund (ENSSTUG00000045408) pgpep1 (ENSSTUG00000045411) upf1 (ENSSTUG00000045435) HOMER3 (ENSSTUG00000045507) uba52 (ENSSTUG00000045528) ENSSTUG00000045550 TIMM44 (ENSSTUG00000045610) rab11bb (ENSSTUG00000046273) MARCHF2 (ENSSTUG00000046310) slc25a36a (ENSSTUG00000046315) ##22 spsb4a (ENSSTUG00000046366) ##23 ENSSTUG00000046370 zgc:136870 (ENSSTUG00000046379) ENSSTUG00000046381 clstn2a (ENSSTUG00000046411) ##24 ENSSTUG00000047323 rbp1.1 (ENSSTUG00000047325) copb2 (ENSSTUG00000047339) DVL3 (ENSSTUG00000025749) AP2M1 (ENSSTUG00000025794) pcyt1aa (ENSSTUG00000025829) SERP1 (ENSSTUG00000025883) ENSSTUG00000025900 selenot1a (ENSSTUG00000025910) zgc:153615 (ENSSTUG00000025922) Atlantic salmon MODERN SPECIES 5 MAST3 (ENSSSAG00000073352) pik3r2 (ENSSSAG00000073374) ifi30 (ENSSSAG00000073631) mpv17l2 (ENSSSAG00000103221) ENSSSAG00000073643 JUND (ENSSSAG00000073669) ENSSSAG00000084399 pgpep1 (ENSSSAG00000073672) upf1 (ENSSSAG00000073685) ENSSSAG00000073735 UBIQ (ENSSSAG00000073744) ENSSSAG00000073752 ENSSSAG00000073759 rab11bb (ENSSSAG00000107231) ENSSSAG00000073798 ENSSSAG00000086180 ##22 ENSSSAG00000087588 ENSSSAG00000073809 ##23 ENSSSAG00000087769 zgc:136870 (ENSSSAG00000073812) clstn2a (ENSSSAG00000073830) ##24 ENSSSAG00000111638 ENSSSAG00000074039 RET1 (ENSSSAG00000074041) RBP2 (ENSSSAG00000074042) copb2 (ENSSSAG00000074067) ENSSSAG00000074540 ENSSSAG00000075127 pcyt1aa (ENSSSAG00000075137) ENSSSAG00000075155 selenot1a (ENSSSAG00000039142) Huchen MODERN SPECIES 636 RAB3A (ENSHHUG00000037938) jund (ENSHHUG00000037933) pgpep1 (ENSHHUG00000037923) upf1 (ENSHHUG00000037879) HOMER3 (ENSHHUG00000037867) uba52 (ENSHHUG00000037841) ENSHHUG00000037767 TIMM44 (ENSHHUG00000037749) rab11bb (ENSHHUG00000037740) MARCHF2 (ENSHHUG00000037734) slc25a36a (ENSHHUG00000037726) ##22 ENSHHUG00000037723 spsb4a (ENSHHUG00000037714) ##23 clstn2a (ENSHHUG00000037660) ##24 ENSHHUG00000037655 Salmoninae ANCESTRAL SPECIES 76 ENSGT00940000157166.d.c ENSGT00940000157050.i.a.c ENSGT00940000164804.a.f ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f ENSGT00940000158959.a.a.a.b ENSGT00940000162806.b.a.h ENSGT00390000015368.a.a.c.g ENSGT00940000157413.h.a ENSGT00940000158081.o.b.d ENSGT00940000153593.e.b.h ENSGT00940000154412.C.c.a ENSGT00390000000051.b.a ENSGT00940000163126.a.a.d ENSGT00940000158995.b.b ENSGT00940000154369.g.a.h ##22 ENSGT01030000234629.C.a.b ##23 ENSGT00950000183086.a.a.b.h.b.d ##24 ENSGT00950000183179.b.b ENSGT00940000159675.a ENSGT00900000141083.c.a.a ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e ENSGT00940000159223.d.a ENSGT00940000157384.a.d ENSGT00940000161729.m.a.b ENSGT00390000011725.d.z ENSGT00940000153655.A.b ENSGT00990000209702 ENSGT00390000011127.d.d ENSGT00390000016906.a Huchen MODERN SPECIES 430 MAST3 (ENSHHUG00000014602) pik3r2 (ENSHHUG00000014480) ifi30 (ENSHHUG00000014453) ENSHHUG00000014434 RAB3A (ENSHHUG00000014367) jund (ENSHHUG00000014358) pgpep1 (ENSHHUG00000014353) upf1 (ENSHHUG00000014328) HOMER3 (ENSHHUG00000014096) uba52 (ENSHHUG00000013789) ENSHHUG00000013743 CTXN1 (ENSHHUG00000013737) TIMM44 (ENSHHUG00000013704) rab11bb (ENSHHUG00000013675) MARCHF2 (ENSHHUG00000013667) slc25a36a (ENSHHUG00000013659) ##22 spsb4a (ENSHHUG00000013651) ##23 Salmoninae_a ANCESTRAL SPECIES 6 ENSGT00940000157166.d.c ENSGT00940000157050.i.a.c ENSGT00940000164804.a.f ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f ENSGT00940000158959.a.a.a.b ENSGT00940000162806.b.a.h ENSGT00390000015368.a.a.c.g ENSGT00940000157413.h.a ENSGT00940000158081.o.b.d ENSGT00940000153593.e.b.g.a ENSGT00940000154412.C.c.a ENSGT00390000000051.b.a ENSGT00940000163126.a.a.d ENSGT00940000158995.b.b ENSGT00940000154369.g.a.h ##22 ENSGT01030000234629.C.a.b ##23 ENSGT00950000183086.a.a.b.h.b.d ##24 ENSGT00950000183179.b.b ENSGT00940000159675.a.b ENSGT00940000159675.a.a ENSGT00900000141083.c.a.a ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e ENSGT00940000159223.d.a ENSGT00940000157384.a.d ENSGT00940000161729.m.a.b.a.a ENSGT00390000011725.d.z ENSGT00940000153655.A.b ENSGT00990000209702 ENSGT00390000011127.d.d Salmo ANCESTRAL SPECIES 5 ENSGT00940000157166.d.c ENSGT00940000157050.i.a.c ENSGT00940000164804.a.f ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f ENSGT00940000158959.a.a.a.b ENSGT00940000162806.b.a.h ENSGT00390000015368.a.a.c.g ENSGT00940000157413.h.a ENSGT00940000158081.o.b.d ENSGT00940000153593.e.b.g.b.a ENSGT00940000154412.C.c.a ENSGT00390000000051.b.a ENSGT00940000163126.a.a.d ENSGT00940000158995.b.b ENSGT00940000154369.g.a.h ##22 ENSGT01030000234629.C.a.b ##23 ENSGT00950000183086.a.a.b.h.b.d ##24 ENSGT00950000183179.b.b ENSGT00940000159675.a.b ENSGT00940000159675.a.a ENSGT00900000141083.c.a.a ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e ENSGT00940000159223.d.a ENSGT00940000157384.a.d ENSGT00940000161729.m.a.b.a.a ENSGT00390000011725.d.z ENSGT00940000153655.A.b ENSGT00990000209702 ENSGT00390000011127.d.d Atlantic salmon MODERN SPECIES 22 ENSSSAG00000076863 MAST3 (ENSSSAG00000076870) pik3r2 (ENSSSAG00000076897) ifi30 (ENSSSAG00000077221) mpv17l2 (ENSSSAG00000077227) ENSSSAG00000077260 ENSSSAG00000085555 jund (ENSSSAG00000077470) upf1 (ENSSSAG00000077507) ENSSSAG00000077729 uba52 (ENSSSAG00000077735) ENSSSAG00000077747 ENSSSAG00000077766 rab11bb (ENSSSAG00000077887) marh2 (ENSSSAG00000077903) slc25a36a (ENSSSAG00000101330) ##22 spsb4a (ENSSSAG00000001822) ##23 clstn2a (ENSSSAG00000001846) ##24 nmnat3 (ENSSSAG00000095565) rbp1.1 (ENSSSAG00000002082) rbp1.1 (ENSSSAG00000084760) copb2 (ENSSSAG00000002265) ENSSSAG00000119258 ENSSSAG00000003034 ap2m1 (ENSSSAG00000072141) ENSSSAG00000099258 PCY1A (ENSSSAG00000003115) SERP1 (ENSSSAG00000003135) selenot1a (ENSSSAG00000103633) ENSSSAG00000003148 ENSSSAG00000003163 River trout MODERN SPECIES 24 MAST3 (ENSSTUG00000047232) pik3r2 (ENSSTUG00000047153) ifi30 (ENSSTUG00000047130) mpv17l2 (ENSSTUG00000047103) ENSSTUG00000047068 RAB3A (ENSSTUG00000047034) jund (ENSSTUG00000047026) pgpep1 (ENSSTUG00000047019) upf1 (ENSSTUG00000046629) HOMER3 (ENSSTUG00000046586) uba52 (ENSSTUG00000046572) CTXN1 (ENSSTUG00000046563) TIMM44 (ENSSTUG00000046222) rab11bb (ENSSTUG00000046172) MARCHF2 (ENSSTUG00000046167) slc25a36a (ENSSTUG00000046079) ##22 spsb4a (ENSSTUG00000046068) ##23 ENSSTUG00000046064 clstn2a (ENSSTUG00000045666) ##24 NMNAT3 (ENSSTUG00000045643) rbp1.1 (ENSSTUG00000045630) rbp1.1 (ENSSTUG00000045623) copb2 (ENSSTUG00000045123) ENSSTUG00000045094 dvl3a (ENSSTUG00000044755) ap2m1a (ENSSTUG00000044679) pcyt1aa (ENSSTUG00000044654) SERP1 (ENSSTUG00000044645) selenot1a (ENSSTUG00000044625) ENSSTUG00000044619 ENSSTUG00000044605 Oncorhynchus ANCESTRAL SPECIES 15 ENSGT00940000157166.d.c ENSGT00940000157050.i.a.c ENSGT00940000164804.a.f ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f ENSGT00940000158959.a.a.a.b ENSGT00940000162806.b.a.h ENSGT00390000015368.a.a.c.g ENSGT00940000157413.h.a ENSGT00940000158081.o.b.d ENSGT00940000153593.e.b.g.a ENSGT00940000154412.C.c.a ENSGT00390000000051.b.a ENSGT00940000163126.a.a.d ENSGT00940000158995.b.b ENSGT00940000154369.g.a.h ##22 ENSGT01030000234629.C.a.b ##23 ENSGT00950000183086.a.a.b.h.b.d ##24 ENSGT00950000183179.b.b ENSGT00940000159675.a.a ENSGT00900000141083.c.a.a ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e ENSGT00940000159223.d.a ENSGT00940000157384.a.d ENSGT00940000161729.m.a.b.a.a ENSGT00390000011725.d.z ENSGT00940000153655.A.b ENSGT00990000209702 ENSGT00390000011127.d.d ENSGT00390000016906.a Rainbow trout MODERN SPECIES 20 ifi30 (ENSOMYG00000046840) ENSOMYG00000046833 ENSOMYG00000046828 ENSOMYG00000046814 ENSOMYG00000046795 jund (ENSOMYG00000046794) pgpep1 (ENSOMYG00000046787) upf1 (ENSOMYG00000046745) ENSOMYG00000046715 uba52 (ENSOMYG00000046709) ENSOMYG00000059679 ENSOMYG00000046700 ENSOMYG00000046644 rab11bb (ENSOMYG00000046591) ENSOMYG00000046583 slc25a36a (ENSOMYG00000046572) ##22 ENSOMYG00000058056 spsb4a (ENSOMYG00000046561) ##23 clstn2a (ENSOMYG00000046517) ##24 NMNAT3 (ENSOMYG00000046471) rbp1.1 (ENSOMYG00000003879) rbp1.1 (ENSOMYG00000073442) copb2 (ENSOMYG00000046308) ENSOMYG00000046266 dvl3a (ENSOMYG00000046247) ENSOMYG00000046211 pcyt1aa (ENSOMYG00000046197) SERP1 (ENSOMYG00000048273) selenot1a (ENSOMYG00000046175) ENSOMYG00000046167 ENSOMYG00000046154 Oncorhynchus_a ANCESTRAL SPECIES 22 ENSGT00940000157166.d.c ENSGT00940000157050.i.a.c ENSGT00940000164804.a.f ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f ENSGT00940000158959.a.a.a.b ENSGT00940000162806.b.a.h ENSGT00390000015368.a.a.c.g ENSGT00940000157413.h.a ENSGT00940000158081.o.b.d ENSGT00940000153593.e.b.g.a ENSGT00940000154412.C.c.a ENSGT00390000000051.b.a ENSGT00940000163126.a.a.d ENSGT00940000158995.b.b ENSGT00940000154369.g.a.h ##22 ENSGT01030000234629.C.a.b ##23 ENSGT00950000183086.a.a.b.h.b.d ##24 ENSGT00950000183179.b.b ENSGT00940000159675.a.a ENSGT00900000141083.c.a.a ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e ENSGT00940000159223.d.a ENSGT00940000157384.a.d ENSGT00940000161729.m.a.b.a.a ENSGT00390000011725.d.z ENSGT00940000153655.A.b ENSGT00990000209702 ENSGT00390000011127.d.d ENSGT00390000016906.a Chinook salmon MODERN SPECIES 2888 ifi30 (ENSOTSG00005027386) mpv17l2 (ENSOTSG00005027385) ENSOTSG00005027382 RAB3A (ENSOTSG00005027381) jund (ENSOTSG00005027380) pgpep1 (ENSOTSG00005027379) upf1 (ENSOTSG00005027257) HOMER3 (ENSOTSG00005027255) uba52 (ENSOTSG00005027254) ENSOTSG00005027252 CTXN1 (ENSOTSG00005027251) TIMM44 (ENSOTSG00005026371) rab11bb (ENSOTSG00005026342) MARCHF2 (ENSOTSG00005026341) SLC25A36 (ENSOTSG00005026340) ##22 slc25a36a (ENSOTSG00005026339) ##22 spsb4a (ENSOTSG00005026338) ##23 ENSOTSG00005026337 clstn2a (ENSOTSG00005026336) ##24 NMNAT3 (ENSOTSG00005026335) rbp1.1 (ENSOTSG00005026334) copb2 (ENSOTSG00005023103) ENSOTSG00005023098 dvl3a (ENSOTSG00005023093) ap2m1a (ENSOTSG00005023092) pcyt1aa (ENSOTSG00005023090) SERP1 (ENSOTSG00005023089) selenot1a (ENSOTSG00005023087) ENSOTSG00005023086 ENSOTSG00005023083 zgc:153615 (ENSOTSG00005023081) Coho salmon MODERN SPECIES 19 ENSOKIG00005015697 pik3r2 (ENSOKIG00005015619) ifi30 (ENSOKIG00005015563) ENSOKIG00005015543 ENSOKIG00005015505 RAB3A (ENSOKIG00005050655) jund (ENSOKIG00005050651) pgpep1 (ENSOKIG00005050649) upf1 (ENSOKIG00005050636) HOMER3 (ENSOKIG00005050624) uba52 (ENSOKIG00005050621) ENSOKIG00005050619 CTXN1 (ENSOKIG00005050616) rab11bb (ENSOKIG00005050607) MARCHF2 (ENSOKIG00005050598) slc25a36a (ENSOKIG00005050589) ##22 TIMM44 (ENSOKIG00005050575) spsb4a (ENSOKIG00005050568) ##23 clstn2a (ENSOKIG00005050560) ##24 NMNAT3 (ENSOKIG00005050549) rbp1.1 (ENSOKIG00005050546) copb2 (ENSOKIG00005050504) ENSOKIG00005050484 dvl3a (ENSOKIG00005050468) ap2m1a (ENSOKIG00005050452) pcyt1aa (ENSOKIG00005050446) SERP1 (ENSOKIG00005050444) selenot1a (ENSOKIG00005050438) ENSOKIG00005050433 ENSOKIG00005050428 zgc:153615 (ENSOKIG00005050423) Northern pike MODERN SPECIES 2 pik3r2 (ENSELUG00000001241) ifi30 (ENSELUG00000020539) mpv17l2 (ENSELUG00000020559) ENSELUG00000020697 RAB3A (ENSELUG00000032538) jund (ENSELUG00000020828) pgpep1 (ENSELUG00000020843) upf1 (ENSELUG00000020917) HOMER3 (ENSELUG00000020980) uba52 (ENSELUG00000027664) CERS4 (ENSELUG00000020996) CTXN1 (ENSELUG00000000927) TIMM44 (ENSELUG00000021107) rab11bb (ENSELUG00000021148) MARCHF2 (ENSELUG00000000931) slc25a36a (ENSELUG00000021181) ##22 spsb4a (ENSELUG00000021197) ##23 clstn2a (ENSELUG00000021303) ##24 NMNAT3 (ENSELUG00000021366) rbp1.1 (ENSELUG00000021393) rbp2b (ENSELUG00000021410) copb2 (ENSELUG00000021442) dvl3a (ENSELUG00000021493) ap2m1a (ENSELUG00000021515) pcyt1aa (ENSELUG00000021543) zgc:92744 (ENSELUG00000021578) selenot1a (ENSELUG00000021595) ENSELUG00000021606 zgc:153615 (ENSELUG00000021618) ENSELUG00000021639 zp3b (ENSELUG00000021647) Osteoglossiformes ANCESTRAL SPECIES 61 ENSGT00390000008688.k.b ENSGT00940000160337.e ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979.e ENSGT00970000193372.b.a.b ENSGT00390000010895.d ENSGT00390000013776 ENSGT00940000155954.a.l ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504 ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.a ##22 ENSGT01030000234629.C.f #23 ENSGT00940000154369.g.b #22 ENSGT01030000234629.C.e #23 ENSGT00950000183086.a.a.b.h.a #24 ENSGT00940000160165.a ENSGT00900000141083.c.a ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.f ENSGT00940000164578.a.a ENSGT00390000004360.a.b.b ENSGT00950000183115.a ENSGT01040000240444.A.b.b ENSGT01040000240444.A.b.a.a ENSGT01030000234571.b.b.a.a.a P. kingsleyae MODERN SPECIES 111 gosr1 (ENSPKIG00000010461) TRARG1 (ENSPKIG00000010449) prss16 (ENSPKIG00000010431) serpine2 (ENSPKIG00000010406) wdfy1 (ENSPKIG00000010305) dhrs12la (ENSPKIG00000010266) AP1S3 (ENSPKIG00000010242) SCG2 (ENSPKIG00000010228) kcne4 (ENSPKIG00000010211) ACSL3 (ENSPKIG00000010165) SGPP2 (ENSPKIG00000010148) ENSPKIG00000010136 pax3b (ENSPKIG00000010111) EPHA4 (ENSPKIG00000010074) pxylp1 (ENSPKIG00000010037) slc25a36a (ENSPKIG00000009989) ##22 SPSB4 (ENSPKIG00000009953) #23 ENSPKIG00000009866 #24 rbp2a (ENSPKIG00000009801) copb2 (ENSPKIG00000009722) PIK3CB (ENSPKIG00000009555) PER2 (ENSPKIG00000009456) hes6 (ENSPKIG00000009399) her8.2 (ENSPKIG00000009382) CAB39 (ENSPKIG00000009349) itm2cb (ENSPKIG00000009323) gpr55a (ENSPKIG00000009312) GPR55 (ENSPKIG00000009300) NGEF (ENSPKIG00000009273) kcnj13 (ENSPKIG00000009260) GIGYF2 (ENSPKIG00000009220) Asian bonytongue MODERN SPECIES 1 CPD (ENSSFOG00015014346) gosr1 (ENSSFOG00015014396) TRARG1 (ENSSFOG00015014426) prss16 (ENSSFOG00015014443) serpine2 (ENSSFOG00015014492) wdfy1 (ENSSFOG00015014504) dhrs12la (ENSSFOG00015014554) scg2b (ENSSFOG00015014650) kcne4 (ENSSFOG00015026676) acsl3b (ENSSFOG00015014664) SGPP2 (ENSSFOG00015033117) ENSSFOG00015029785 pax3b (ENSSFOG00015014722) epha4a (ENSSFOG00015014754) pxylp1 (ENSSFOG00015030762) slc25a36a (ENSSFOG00015014829) ##22 spsb4b (ENSSFOG00015032747) #23 CLSTN2 (ENSSFOG00015014863) #24 RBP2 (ENSSFOG00015014921) copb2 (ENSSFOG00015014936) PIK3CB (ENSSFOG00015015008) PER2 (ENSSFOG00015015057) hes6 (ENSSFOG00015015081) her8.2 (ENSSFOG00015015100) CAB39 (ENSSFOG00015027019) itm2cb (ENSSFOG00015015139) gpr55a (ENSSFOG00015015155) GPR55 (ENSSFOG00015015163) NGEF (ENSSFOG00015015175) gigyf2 (ENSSFOG00015015193) kcnj13 (ENSSFOG00015015213) Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Ovalentaria ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Poeciliinae ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Poecilia ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Guppy DUPLICATION Guppy MODERN SPECIES 447 ENSPREG00000014589 ENSPREG00000014558 prg4a (ENSPREG00000014538) dusp12 (ENSPREG00000014521) OLFML2B (ENSPREG00000014496) ENSPREG00000014488 ENSPREG00000014481 kifap3b (ENSPREG00000014417) PDC (ENSPREG00000014388) ENSPREG00000014369 CTXN1 (ENSPREG00000014346) TIMM44 (ENSPREG00000014295) rab11bb (ENSPREG00000014269) MARCHF2 (ENSPREG00000014259) ENSPREG00000014251 ##22 ENSPREG00000014238 ##22 spsb4a (ENSPREG00000014221) ##23 clstn2a (ENSPREG00000014196) ##24 NMNAT3 (ENSPREG00000014156) rbp1.1 (ENSPREG00000014144) copb2 (ENSPREG00000014106) ENSPREG00000014095 dvl3a (ENSPREG00000014078) ap2m1a (ENSPREG00000014057) pcyt1aa (ENSPREG00000014022) and3 (ENSPREG00000014008) DYNC1I2 (ENSPREG00000013942) slc25a12 (ENSPREG00000013884) ENSPREG00000013866 metap1d (ENSPREG00000013845) itga6b (ENSPREG00000013714) Guppy MODERN SPECIES 447 odr4 (ENSPREG00000014667) ENSPREG00000014589 ENSPREG00000014558 prg4a (ENSPREG00000014538) dusp12 (ENSPREG00000014521) OLFML2B (ENSPREG00000014496) ENSPREG00000014488 ENSPREG00000014481 kifap3b (ENSPREG00000014417) PDC (ENSPREG00000014388) ENSPREG00000014369 CTXN1 (ENSPREG00000014346) TIMM44 (ENSPREG00000014295) rab11bb (ENSPREG00000014269) MARCHF2 (ENSPREG00000014259) ENSPREG00000014251 ##22 ENSPREG00000014238 ##22 spsb4a (ENSPREG00000014221) ##23 clstn2a (ENSPREG00000014196) ##24 NMNAT3 (ENSPREG00000014156) rbp1.1 (ENSPREG00000014144) copb2 (ENSPREG00000014106) ENSPREG00000014095 dvl3a (ENSPREG00000014078) ap2m1a (ENSPREG00000014057) pcyt1aa (ENSPREG00000014022) and3 (ENSPREG00000014008) DYNC1I2 (ENSPREG00000013942) slc25a12 (ENSPREG00000013884) ENSPREG00000013866 metap1d (ENSPREG00000013845) NAME_4 ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Sheepshead minnow MODERN SPECIES 870 ENSCVAG00000013718 ENSCVAG00000013707 pxylp1 (ENSCVAG00000013694) ENSCVAG00000013683 ##22 spsb4a (ENSCVAG00000013675) #23 Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Turquoise killifish MODERN SPECIES 357 ZGC (ENSNFUG00015019539) USF1 (ENSNFUG00015019601) ENSNFUG00015019635 ENSNFUG00015019642 ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Salmoninae ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Chinook salmon MODERN SPECIES 2888 pik3r2 (ENSOTSG00005027388) ifi30 (ENSOTSG00005027386) mpv17l2 (ENSOTSG00005027385) ENSOTSG00005027382 RAB3A (ENSOTSG00005027381) jund (ENSOTSG00005027380) pgpep1 (ENSOTSG00005027379) upf1 (ENSOTSG00005027257) HOMER3 (ENSOTSG00005027255) uba52 (ENSOTSG00005027254) ENSOTSG00005027252 CTXN1 (ENSOTSG00005027251) TIMM44 (ENSOTSG00005026371) rab11bb (ENSOTSG00005026342) MARCHF2 (ENSOTSG00005026341) SLC25A36 (ENSOTSG00005026340) ##22 slc25a36a (ENSOTSG00005026339) ##22 spsb4a (ENSOTSG00005026338) ##23 ENSOTSG00005026337 clstn2a (ENSOTSG00005026336) ##24 NMNAT3 (ENSOTSG00005026335) rbp1.1 (ENSOTSG00005026334) copb2 (ENSOTSG00005023103) ENSOTSG00005023098 dvl3a (ENSOTSG00005023093) ap2m1a (ENSOTSG00005023092) pcyt1aa (ENSOTSG00005023090) SERP1 (ENSOTSG00005023089) selenot1a (ENSOTSG00005023087) ENSOTSG00005023086 ENSOTSG00005023083 Otomorpha ANCESTRAL SPECIES 38 ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00980000200268 ENSGT01060000253400 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT00940000154369.h ##22 ENSGT01030000234629.C.d #23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675.c ENSGT00940000160165.b ENSGT00900000141083.c.a Otophysi ANCESTRAL SPECIES 3 ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00990000209937 ENSGT01060000253400 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a ##22 ENSGT00940000162556.D.b.a ENSGT00940000154369.h ##22 ENSGT01030000234629.C.d #23 ENSGT00950000183086.a.a.b.h.b ##24 ENSGT00950000183179.b.b ENSGT00940000159675.c ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00940000160062.a ENSGT00980000198654 ENSGT00940000157990.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163496.a.i.a ENSGT00940000159567.a.a ENSGT00940000157841 ENSGT00940000162200.a.b ENSGT00390000001141 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Cyprininae ANCESTRAL SPECIES 71 ENSGT00940000173713.h.b.a ENSGT01030000235105.b.a ENSGT00940000156948.i.b.a ENSGT00940000154369.h ##22 ENSGT01030000234629.C.d.a #23 ENSGT00940000162556.D.b.a.b ENSGT00950000183116.b.a.a.a.b.d ENSGT00950000183086.a.a.b.h.b.a ##24 ENSGT00950000183179.b.b.f.a ENSGT00940000159675.d.a ENSGT00940000160165.b.a ENSGT00900000141083.c.a.e ENSGT00940000160062.a.b ENSGT00980000198654.b ENSGT00940000157990.a.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163496.a.i.b.a.a ENSGT00940000159567.a.a.f ENSGT00940000157841.c Cyprininae_a ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Golden-line barbel MODERN SPECIES 49 epha4b (ENSSGRG00000005765) ENSSGRG00000005766 ENSSGRG00000005767 ENSSGRG00000005768 ENSSGRG00000005769 epha4a (ENSSGRG00000005777) SLC25A36 (ENSSGRG00000005873) ##22 spsb4a (ENSSGRG00000005875) #23 ENSSGRG00000005879 ENSSGRG00000005980 ENSSGRG00000005982 clstn2a (ENSSGRG00000006002) ##24 NMNAT3 (ENSSGRG00000006155) RBP1 (ENSSGRG00000006159) rbp1.2 (ENSSGRG00000006162) rbp2b (ENSSGRG00000006166) copb2 (ENSSGRG00000006200) ENSSGRG00000007680 rem2 (ENSSGRG00000007681) carmil3 (ENSSGRG00000007688) ehf (ENSSGRG00000007691) ric8a (ENSSGRG00000007694) Spotted gar MODERN SPECIES 652 FAM124B (ENSLOCG00000003983) prss16 (ENSLOCG00000003995) serpine2 (ENSLOCG00000004009) wdfy1 (ENSLOCG00000004030) dhrs12la (ENSLOCG00000004049) ap1s3a (ENSLOCG00000004062) scg2b (ENSLOCG00000004078) acsl3b (ENSLOCG00000004093) MOGAT1 (ENSLOCG00000004115) farsb (ENSLOCG00000004136) SGPP2 (ENSLOCG00000004157) ENSLOCG00000017388 pax3b (ENSLOCG00000004189) epha4a (ENSLOCG00000004201) pxylp1 (ENSLOCG00000004225) slc25a36a (ENSLOCG00000004239) #22 ENSLOCG00000004257 ##23 ENSLOCG00000004271 clstn2a (ENSLOCG00000004289) #24 rbp1.1 (ENSLOCG00000004318) rbp2a (ENSLOCG00000004353) copb2 (ENSLOCG00000004368) mrps22 (ENSLOCG00000004403) foxl2b (ENSLOCG00000017389) PIK3CB (ENSLOCG00000004421) per2 (ENSLOCG00000004441) hes6 (ENSLOCG00000004463) her8.2 (ENSLOCG00000004481) CAB39 (ENSLOCG00000004495) itm2ca (ENSLOCG00000004510) lpar5a (ENSLOCG00000004527) Reedfish MODERN SPECIES 10 prss16 (ENSECRG00000006358) serpine2 (ENSECRG00000006348) wdfy1 (ENSECRG00000006326) ap1s3a (ENSECRG00000006313) scg2b (ENSECRG00000006306) ENSECRG00000006298 acsl3b (ENSECRG00000006284) farsb (ENSECRG00000006261) SGPP2 (ENSECRG00000006254) ENSECRG00000006249 pax3b (ENSECRG00000006222) ENSECRG00000006209 epha4a (ENSECRG00000006165) pxylp1 (ENSECRG00000006136) ENSECRG00000006127 slc25a36a (ENSECRG00000006114) #22 ENSECRG00000006105 ##23 clstn2a (ENSECRG00000006071) #24 rbp1.2 (ENSECRG00000006044) rbp2a (ENSECRG00000006038) ENSECRG00000005613 ENSECRG00000005533 copb2 (ENSECRG00000005501) ENSECRG00000005481 ENSECRG00000005473 copb2 (ENSECRG00000005450) mrps22 (ENSECRG00000005428) foxl2b (ENSECRG00000005423) PIK3CB (ENSECRG00000005393) per2 (ENSECRG00000005382) hes6 (ENSECRG00000005369) Sarcopterygii ANCESTRAL SPECIES 5 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT01030000234629.C #23 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 ENSGT00390000004360.a.b.b ENSGT00950000183115.a Coelacanth MODERN SPECIES 582 PXYLP1 (ENSLACG00000008983) SLC25A36 (ENSLACG00000011101) #22 ENSLACG00000013302 ##23 ENSLACG00000014538 #24 ENSLACG00000015143 #24 ENSLACG00000015843 Tetrapoda ANCESTRAL SPECIES 12 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT01030000234629.C #23 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000159217 ENSGT00390000011553 ENSGT00940000156342 ENSGT00940000161398 Anura ANCESTRAL SPECIES 13 ENSGT00940000160269 ENSGT01050000244888.b.a.c.b ENSGT00940000157819 ENSGT00940000161551.a ENSGT00940000154674 ENSGT00910000144305 ENSGT00390000015458 ENSGT00940000155866 ENSGT01030000234590.A.b.a.b.b ENSGT01030000234590.A.b.a.b.a ENSGT00940000165445 ENSGT01030000234590.A.b.b ENSGT00510000046760.b ENSGT00390000008489 ENSGT00950000183086.a.a.b #24 ENSGT00940000154369 #22 ENSGT01030000234629.B ##23 ENSGT00390000016324 ENSGT00940000155066 ENSGT00590000083134.a.b ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000156948 ENSGT01030000235098 ENSGT00940000156504 ENSGT00940000166595.a ENSGT00940000159500 ENSGT00530000063489.a ENSGT01030000234582.e.a ENSGT00940000155954.a ENSGT00390000013776 Leishan spiny toad MODERN SPECIES 7 CP (ENSLLEG00000005746) TM4SF18 (ENSLLEG00000005651) TM4SF1 (ENSLLEG00000005612) ENSLLEG00000005527 ENSLLEG00000005480 ENSLLEG00000005442 ENSLLEG00000005417 ENSLLEG00000005390 WWTR1 (ENSLLEG00000005366) COMMD2 (ENSLLEG00000005341) ENSLLEG00000005333 ENSLLEG00000005324 CLSTN2 (ENSLLEG00000005271) #24 ENSLLEG00000005247 ENSLLEG00000005240 SLC25A36 (ENSLLEG00000005215) #22 ENSLLEG00000005189 ##23 ENSLLEG00000005157 PXYLP1 (ENSLLEG00000005138) ENSLLEG00000005128 CUL3 (ENSLLEG00000005001) FAM124B (ENSLLEG00000004969) ENSLLEG00000004931 ENSLLEG00000004908 ENSLLEG00000004900 ENSLLEG00000004893 SERPINE2 (ENSLLEG00000004875) ENSLLEG00000004816 ENSLLEG00000004809 ENSLLEG00000004784 ENSLLEG00000014155 Frog MODERN SPECIES 5 ENSXETG00000033023 cpa3 (ENSXETG00000016076) ENSXETG00000048131 gyg1 (ENSXETG00000016072) hltf (ENSXETG00000029917) hps3 (ENSXETG00000016060) cp (ENSXETG00000031159) tm4sf18 (ENSXETG00000036355) tm4sf1 (ENSXETG00000016042) XB5764007 [provisional:ggt1] (ENSXETG00000033992) XB5965330 [provisional] (ENSXETG00000016019) wwtr1 (ENSXETG00000016011) commd2 (ENSXETG00000043998) clstn2 (ENSXETG00000020738) #24 ENSXETG00000047502 slc25a36 (ENSXETG00000020731) #22 ENSXETG00000048032 spsb4 (ENSXETG00000039510) ##23 pxylp1 (ENSXETG00000030599) cul3 (ENSXETG00000008183) fam124b (ENSXETG00000028080) XB5767034 [provisional] (ENSXETG00000008182) serpine2 (ENSXETG00000028081) ENSXETG00000049265 epha4 (ENSXETG00000007614) ENSXETG00000038525 pax3 (ENSXETG00000007640) ENSXETG00000043863 ENSXETG00000035642 sgpp2 (ENSXETG00000030642) farsb (ENSXETG00000002934) Amniota ANCESTRAL SPECIES 13 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT01030000234629.C #23 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 ENSGT00390000004360.a.b.b Mammalia ANCESTRAL SPECIES 72 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT01030000234629.C #23 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 ENSGT00390000004360.a.b.b ENSGT00950000183115.a Platypus DUPLICATION Platypus MODERN SPECIES BIRC6 (ENSOANG00000004758) TTC27 (ENSOANG00000002333) LTBP1 (ENSOANG00000002334) RASGRP3 (ENSOANG00000002336) ENSOANG00000002340 ENSOANG00000021254 CILK1 (ENSOANG00000041751) FBXO9 (ENSOANG00000002341) GCM1 (ENSOANG00000048416) ELOVL5 (ENSOANG00000011799) GCLC (ENSOANG00000002861) KLHL31 (ENSOANG00000031343) ENSOANG00000005996 LRRC1 (ENSOANG00000037357) TINAG (ENSOANG00000003592) ENSOANG00000037791 #22 FAM83B (ENSOANG00000013832) ENSOANG00000001461 ENSOANG00000040855 ENSOANG00000051235 HMGCLL1 (ENSOANG00000050502) BMP5 (ENSOANG00000048834) ENSOANG00000010078 ENSOANG00000037887 ENSOANG00000028846 ENSOANG00000044351 ZNF451 (ENSOANG00000013803) BAG2 (ENSOANG00000045205) RAB23 (ENSOANG00000036074) ENSOANG00000037097 KHDRBS2 (ENSOANG00000032105) Platypus MODERN SPECIES RAP2B (ENSOANG00000045350) ARHGEF26 (ENSOANG00000044706) DHX36 (ENSOANG00000007079) GPR149 (ENSOANG00000041736) MME (ENSOANG00000009510) PLCH1 (ENSOANG00000012464) ENSOANG00000010032 SLC33A1 (ENSOANG00000010031) GMPS (ENSOANG00000013670) ENSOANG00000010029 KCNAB1 (ENSOANG00000038732) SSR3 (ENSOANG00000041038) TIPARP (ENSOANG00000051335) LEKR1 (ENSOANG00000028954) PXYLP1 (ENSOANG00000022504) SLC25A36 (ENSOANG00000050040) #22 ENSOANG00000012051 ##23 TRIM42 (ENSOANG00000014969) CLSTN2 (ENSOANG00000000204) #24 ENSOANG00000002680 ENSOANG00000041359 RBP1 (ENSOANG00000002683) RBP2 (ENSOANG00000002685) COPB2 (ENSOANG00000003417) MRPS22 (ENSOANG00000037094) FOXL2 (ENSOANG00000042175) PIK3CB (ENSOANG00000014698) ENSOANG00000003058 PER2 (ENSOANG00000003059) ENSOANG00000003062 ENSOANG00000011082 Theria ANCESTRAL SPECIES 40 ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369 #22 ENSGT01030000234629.C #23 ENSGT00390000016324 Marsupialia ANCESTRAL SPECIES 5 ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369 #22 ENSGT00390000016324 ENSGT00990000204054 ENSGT00530000063529.C ENSGT00940000167875 ENSGT00940000160622 ENSGT00390000005140.b.b ENSGT00390000013989.a ENSGT00950000183071.a.a.b ENSGT00390000004600.b.a ENSGT00440000037733 ENSGT00390000010397.b ENSGT00390000004912 ENSGT00730000111130 ENSGT00390000018525.b ENSGT01100000263537.b.a.a.b.a Opossum MODERN SPECIES 3 MRAS (ENSMODG00000018565) ESYT3 (ENSMODG00000018569) CEP70 (ENSMODG00000018573) FAIM (ENSMODG00000018576) PIK3CB (ENSMODG00000018581) FOXL2 (ENSMODG00000018597) ENSMODG00000028472 MRPS22 (ENSMODG00000018598) COPB2 (ENSMODG00000018599) RBP2 (ENSMODG00000018602) RBP1 (ENSMODG00000018603) NMNAT3 (ENSMODG00000018604) ENSMODG00000051113 CLSTN2 (ENSMODG00000018610) #24 TRIM42 (ENSMODG00000018613) SLC25A36 (ENSMODG00000018620) #22 ENSMODG00000018624 ##23 RPL36AL (ENSMODG00000024968) PXYLP1 (ENSMODG00000018625) ENSMODG00000024966 ENSMODG00000018626 ENSMODG00000018631 FAM168B (ENSMODG00000018633) ENSMODG00000018634 ENSMODG00000037582 ENSMODG00000024963 HS6ST1 (ENSMODG00000018639) UGGT1 (ENSMODG00000018642) ENSMODG00000043774 ENSMODG00000050900 SAP130 (ENSMODG00000018648) Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369 #22 ENSGT00390000016324 ENSGT00990000204054 ENSGT00530000063529.C ENSGT00940000167875 ENSGT00940000160622 ENSGT00390000005140.b.b ENSGT00390000013989.a ENSGT00950000183071.a.a.b ENSGT00390000004600.b.a ENSGT00440000037733 ENSGT00390000010397.b ENSGT00390000004912 ENSGT00730000111130 ENSGT00390000018525.b ENSGT01100000263537.b.a.a.b.a Diprotodontia ANCESTRAL SPECIES 23 ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369 #22 Diprotodontia_a ANCESTRAL SPECIES 24 ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369 #22 Common wonbat MODERN SPECIES 1139 MRAS (ENSVURG00010008717) ESYT3 (ENSVURG00010008736) CEP70 (ENSVURG00010008751) FAIM (ENSVURG00010008782) PIK3CB (ENSVURG00010008817) FOXL2 (ENSVURG00010008846) ENSVURG00010008860 MRPS22 (ENSVURG00010008866) COPB2 (ENSVURG00010008881) RBP2 (ENSVURG00010008964) RBP1 (ENSVURG00010008993) NMNAT3 (ENSVURG00010009001) CLSTN2 (ENSVURG00010009024) #24 TRIM42 (ENSVURG00010009040) ENSVURG00010009052 SLC25A36 (ENSVURG00010009063) #22 ENSVURG00010009083 ##23 koala MODERN SPECIES 23 MRAS (ENSPCIG00000006467) ESYT3 (ENSPCIG00000006456) CEP70 (ENSPCIG00000006448) FAIM (ENSPCIG00000006445) PIK3CB (ENSPCIG00000006433) FOXL2 (ENSPCIG00000024624) MRPS22 (ENSPCIG00000024621) COPB2 (ENSPCIG00000024620) RBP2 (ENSPCIG00000012414) RBP1 (ENSPCIG00000012413) NMNAT3 (ENSPCIG00000012409) ENSPCIG00000023599 CLSTN2 (ENSPCIG00000036104) #24 TRIM42 (ENSPCIG00000019455) ENSPCIG00000019446 SLC25A36 (ENSPCIG00000019442) #22 ENSPCIG00000019436 ##23 ENSPCIG00000030929 ENSPCIG00000034081 ENSPCIG00000033567 Wallaby MODERN SPECIES 2304 ENSMEUG00000008270 #22 Tasmanian devil MODERN SPECIES 2 NME9 (ENSSHAG00000008437) MRAS (ENSSHAG00000009032) ESYT3 (ENSSHAG00000010128) CEP70 (ENSSHAG00000031907) FAIM (ENSSHAG00000002345) PIK3CB (ENSSHAG00000000088) FOXL2 (ENSSHAG00000024160) MRPS22 (ENSSHAG00000011106) COPB2 (ENSSHAG00000011236) RBP2 (ENSSHAG00000012168) RBP1 (ENSSHAG00000012948) NMNAT3 (ENSSHAG00000013356) ENSSHAG00000020575 CLSTN2 (ENSSHAG00000022228) #24 TRIM42 (ENSSHAG00000017626) ENSSHAG00000018069 #22 ENSSHAG00000018135 ##23 ENSSHAG00000031210 ENSSHAG00000023007 ENSSHAG00000004997 ENSSHAG00000006183 ENSSHAG00000031252 ENSSHAG00000011465 ENSSHAG00000025615 ENSSHAG00000011809 ENSSHAG00000025125 ENSSHAG00000013543 UGGT1 (ENSSHAG00000013788) SAP130 (ENSSHAG00000025799) ENSSHAG00000021871 POLR2D (ENSSHAG00000024766) Eutheria ANCESTRAL SPECIES 5 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369 #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00910000147942 ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Atlantogenata ANCESTRAL SPECIES 45 ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369 #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Xenarthra ANCESTRAL SPECIES 768 ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369 #22 ENSGT01030000234629.C #23 Sloth MODERN SPECIES 1342 SLC25A36 (ENSCHOG00000003314) #22 Armadillo MODERN SPECIES 458 MRPS22 (ENSDNOG00000019339) RBP2 (ENSDNOG00000013605) RBP1 (ENSDNOG00000025423) NMNAT3 (ENSDNOG00000041490) CLSTN2 (ENSDNOG00000003077) #24 TRIM42 (ENSDNOG00000009507) SLC25A36 (ENSDNOG00000004117) #22 SPSB4 (ENSDNOG00000044117) #23 Afrotheria ANCESTRAL SPECIES 59 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369 #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000161292 Tenrec MODERN SPECIES 1555 SLC25A36 (ENSETEG00000016383) #22 Afrotheria_a ANCESTRAL SPECIES 57 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369 #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000161292 Hyrax MODERN SPECIES 1222 ENSPCAG00000010522 #22 Elephant MODERN SPECIES 383 RBP1 (ENSLAFG00000022319) NMNAT3 (ENSLAFG00000009824) CLSTN2 (ENSLAFG00000017595) #24 TRIM42 (ENSLAFG00000008928) SLC25A36 (ENSLAFG00000001428) #22 SPSB4 (ENSLAFG00000004961) #23 PXYLP1 (ENSLAFG00000010318) RASA2 (ENSLAFG00000004893) RNF7 (ENSLAFG00000005263) GRK7 (ENSLAFG00000005265) ATP1B3 (ENSLAFG00000010553) TFDP2 (ENSLAFG00000010557) GK5 (ENSLAFG00000008661) XRN1 (ENSLAFG00000015426) ATR (ENSLAFG00000015442) PLS1 (ENSLAFG00000008746) TRPC1 (ENSLAFG00000004282) PCOLCE2 (ENSLAFG00000004287) U2SURP (ENSLAFG00000002566) CHST2 (ENSLAFG00000001355) Boreoeutheria DUPLICATION Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Glires ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Lagomorpha ANCESTRAL SPECIES 6 ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.c.a #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909.i.a ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Rabbit DUPLICATION Rabbit MODERN SPECIES TPD52L3 (ENSOCUG00000016443) ENSOCUG00000014925 ENSOCUG00000013813 ENSOCUG00000011554 KIAA2026 (ENSOCUG00000016474) MLANA (ENSOCUG00000016469) ERMP1 (ENSOCUG00000017609) RIC1 (ENSOCUG00000010108) ENSOCUG00000032240 CD274 (ENSOCUG00000008117) PLGRKT (ENSOCUG00000008095) ENSOCUG00000025640 ENSOCUG00000030357 ENSOCUG00000038359 ENSOCUG00000030169 ENSOCUG00000037426 #22 ENSOCUG00000031086 INSL6 (ENSOCUG00000013682) ENSOCUG00000037721 JAK2 (ENSOCUG00000016853) RCL1 (ENSOCUG00000008161) ENSOCUG00000013279 #22 ENSOCUG00000011411 CDC37L1 (ENSOCUG00000003468) SPATA6L (ENSOCUG00000003455) PLPP6 (ENSOCUG00000003465) ENSOCUG00000022202 ENSOCUG00000026987 ENSOCUG00000013264 ENSOCUG00000036407 GLIS3 (ENSOCUG00000023004) Rabbit MODERN SPECIES 5 MRAS (ENSOCUG00000005929) ESYT3 (ENSOCUG00000009461) ENSOCUG00000009469 FAIM (ENSOCUG00000009724) PIK3CB (ENSOCUG00000004899) ENSOCUG00000022605 ENSOCUG00000009136 ENSOCUG00000021261 ENSOCUG00000039263 MRPS22 (ENSOCUG00000001119) COPB2 (ENSOCUG00000001120) RBP2 (ENSOCUG00000008146) ENSOCUG00000006264 CLSTN2 (ENSOCUG00000002557) #24 TRIM42 (ENSOCUG00000005488) ENSOCUG00000002085 #22 PXYLP1 (ENSOCUG00000007855) ZBTB38 (ENSOCUG00000003699) RASA2 (ENSOCUG00000001219) GRK7 (ENSOCUG00000000636) ATP1B3 (ENSOCUG00000000338) TFDP2 (ENSOCUG00000016458) GK5 (ENSOCUG00000014237) XRN1 (ENSOCUG00000001861) ATR (ENSOCUG00000001874) PLS1 (ENSOCUG00000017700) TRPC1 (ENSOCUG00000017709) PCOLCE2 (ENSOCUG00000013111) PAQR9 (ENSOCUG00000016734) U2SURP (ENSOCUG00000012121) CHST2 (ENSOCUG00000012132) Rodentia ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Rodentia_B ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Myomorpha ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Lesser Egyptian jerboa MODERN SPECIES 139 ENSJJAG00000000513 ENSJJAG00000013279 ENSJJAG00000000081 Pgk1 (ENSJJAG00000023664) ENSJJAG00000023542 ENSJJAG00000023347 ENSJJAG00000016547 Cysltr1 (ENSJJAG00000015881) Rtl3 (ENSJJAG00000014790) Lpar4 (ENSJJAG00000014526) P2ry10 (ENSJJAG00000013101) Gpr174 (ENSJJAG00000013177) Itm2a (ENSJJAG00000017652) Tbx22 (ENSJJAG00000013684) Chmp1b2 (ENSJJAG00000010993) ENSJJAG00000005298 #22 ENSJJAG00000021152 ENSJJAG00000017346 ENSJJAG00000014632 ENSJJAG00000012761 ENSJJAG00000005391 Muroidea ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Muroidea_A ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Cricetidae ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Cricetinae ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Golden Hamster MODERN SPECIES 719 ENSMAUG00000005643 Mrps22 (ENSMAUG00000009906) Copb2 (ENSMAUG00000002677) Rbp2 (ENSMAUG00000001165) Rbp1 (ENSMAUG00000000350) Nmnat3 (ENSMAUG00000014608) Clstn2 (ENSMAUG00000007746) #24 Trim42 (ENSMAUG00000011369) Slc25a36 (ENSMAUG00000010528) #22 Spsb4 (ENSMAUG00000001794) #23 Pxylp1 (ENSMAUG00000001196) Zbtb38 (ENSMAUG00000000765) Rasa2 (ENSMAUG00000006323) Gm28729 (ENSMAUG00000018725) ENSMAUG00000016180 Tfdp2 (ENSMAUG00000016744) Gk5 (ENSMAUG00000014487) ENSMAUG00000014268 Atr (ENSMAUG00000013539) Pls1 (ENSMAUG00000014147) Trpc1 (ENSMAUG00000010246) Pcolce2 (ENSMAUG00000013362) ENSMAUG00000009255 Chst2 (ENSMAUG00000006721) Murinae ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Rat MODERN SPECIES 15 Coq3 (ENSRNOG00000009974) Faxc (ENSRNOG00000010106) ENSRNOG00000071090 Fbxl4 (ENSRNOG00000005641) Pou3f2 (ENSRNOG00000063836) Mms22l (ENSRNOG00000006996) Klhl32 (ENSRNOG00000007441) Ndufaf4 (ENSRNOG00000007506) ENSRNOG00000069171 Gpr63 (ENSRNOG00000007675) Fhl5 (ENSRNOG00000007680) Ufl1 (ENSRNOG00000007831) AABR07047293.1 (ENSRNOG00000032078) Fut9 (ENSRNOG00000070149) Manea (ENSRNOG00000008626) Slc25a36-ps1 (ENSRNOG00000064371) #22 Epha7 (ENSRNOG00000007030) RGD1562265 (ENSRNOG00000069296) Map3k7 (ENSRNOG00000005724) Bach2 (ENSRNOG00000006170) Gja10 (ENSRNOG00000006478) Casp8ap2 (ENSRNOG00000006487) Mdn1 (ENSRNOG00000047513) Lyrm2 (ENSRNOG00000043105) Ankrd6 (ENSRNOG00000007110) Ggact-ps3 (ENSRNOG00000067156) Rragd (ENSRNOG00000007331) Ube2j1 (ENSRNOG00000007434) Gabrr2 (ENSRNOG00000007490) Gabrr1 (ENSRNOG00000007603) Pm20d2 (ENSRNOG00000007755) Mus ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Mus_A ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Mus_B ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Mus_C ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Steppe mouse MODERN SPECIES 2521 ENSMSIG00000006555 #22 Rodentia_A ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 69 TRIM42 (ENSODEG00000009982) ENSODEG00000009644 #22 SPSB4 (ENSODEG00000010189) #23 PXYLP1 (ENSODEG00000009182) ENSODEG00000019578 ENSODEG00000019641 ZBTB38 (ENSODEG00000010676) ENSODEG00000009714 RASA2 (ENSODEG00000008895) ENSODEG00000010594 ENSODEG00000010015 ENSODEG00000009611 ENSODEG00000010281 GRK7 (ENSODEG00000009406) ENSODEG00000010038 TFDP2 (ENSODEG00000009381) GK5 (ENSODEG00000009274) Degu MODERN SPECIES 75 ENSODEG00000007234 ENSODEG00000006880 #22 ENSODEG00000006327 ENSODEG00000009646 REP15 (ENSODEG00000019622) ENSODEG00000009117 MRPS35 (ENSODEG00000006203) ENSODEG00000006408 MANSC4 (ENSODEG00000005858) ENSODEG00000006858 ENSODEG00000006481 KLHL42 (ENSODEG00000006031) ENSODEG00000007050 PTHLH (ENSODEG00000007369) ENSODEG00000006868 EYA4 (ENSODEG00000006283) ENSODEG00000019226 Degu DUPLICATION Degu MODERN SPECIES 354 ENSODEG00000000165 #22 ENSODEG00000000184 ENSODEG00000000206 ENSODEG00000000252 ENSODEG00000018541 Degu MODERN SPECIES 87 LIPJ (ENSODEG00000004545) ENSODEG00000005297 LIPF (ENSODEG00000005106) LIPK (ENSODEG00000004941) LIPN (ENSODEG00000005009) LIPM (ENSODEG00000004722) ANKRD22 (ENSODEG00000006197) ENSODEG00000005966 ACTA2 (ENSODEG00000005541) ENSODEG00000005184 LIPA (ENSODEG00000005659) ENSODEG00000006311 SLC16A12 (ENSODEG00000006954) PANK1 (ENSODEG00000006515) ENSODEG00000019069 ENSODEG00000004557 #22 KIF20B (ENSODEG00000005304) ENSODEG00000019106 HTR7 (ENSODEG00000004910) ENSODEG00000004530 ANKRD1 (ENSODEG00000005129) PCGF5 (ENSODEG00000004787) ENSODEG00000005047 HECTD2 (ENSODEG00000004980) PPP1R3C (ENSODEG00000006013) TNKS2 (ENSODEG00000004816) BTAF1 (ENSODEG00000005172) ENSODEG00000005031 CPEB3 (ENSODEG00000004591) ENSODEG00000004464 MARCHF5 (ENSODEG00000004219) Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 27 RNF7 (ENSHGLG00000038279) RASA2 (ENSHGLG00000012050) ZBTB38 (ENSHGLG00000011669) PXYLP1 (ENSHGLG00000014087) ENSHGLG00000014428 SPSB4 (ENSHGLG00000013816) #23 ENSHGLG00000021114 ENSHGLG00000045813 #22 ENSHGLG00000041508 ENSHGLG00000013325 ENSHGLG00000049519 ENSHGLG00000020964 ENSHGLG00000044512 ENSHGLG00000012472 #24 NMNAT3 (ENSHGLG00000012035) ENSHGLG00000012202 #22 ENSHGLG00000036615 RBP2 (ENSHGLG00000011738) COPB2 (ENSHGLG00000011244) ENSHGLG00000010873 PRR23C (ENSHGLG00000037355) ENSHGLG00000040288 FOXL2 (ENSHGLG00000032272) ENSHGLG00000010934 FAIM (ENSHGLG00000040397) ENSHGLG00000014334 ESYT3 (ENSHGLG00000014239) ENSHGLG00000014269 MRAS (ENSHGLG00000048838) NME9 (ENSHGLG00000014916) ENSHGLG00000014743 Naked mole-rat female MODERN SPECIES 4 ENSHGLG00000042956 EXOC6 (ENSHGLG00000012531) HHEX (ENSHGLG00000033111) KIF11 (ENSHGLG00000014395) IDE (ENSHGLG00000012665) MARCH5 (ENSHGLG00000044946) CPEB3 (ENSHGLG00000014022) BTAF1 (ENSHGLG00000010425) FGFBP3 (ENSHGLG00000046261) TNKS2 (ENSHGLG00000018423) PPP1R3C (ENSHGLG00000045942) ENSHGLG00000033981 HECTD2 (ENSHGLG00000013810) PCGF5 (ENSHGLG00000016348) ENSHGLG00000047830 ENSHGLG00000016315 #22 ENSHGLG00000016279 ENSHGLG00000013072 ENSHGLG00000011172 ENSHGLG00000037303 ENSHGLG00000041517 ENSHGLG00000012239 ENSHGLG00000020968 ENSHGLG00000010782 ENSHGLG00000043314 PANK1 (ENSHGLG00000010521) SLC16A12 (ENSHGLG00000007331) IFIT5 (ENSHGLG00000043608) ENSHGLG00000012010 ENSHGLG00000011005 IFIT3 (ENSHGLG00000049612) Naked mole-rat female MODERN SPECIES 3 KCNV2 (ENSHGLG00000015810) VLDLR (ENSHGLG00000016113) ENSHGLG00000016566 ENSHGLG00000035043 ENSHGLG00000005215 ENSHGLG00000013697 ENSHGLG00000035319 ENSHGLG00000036415 ENSHGLG00000033430 DMRT3 (ENSHGLG00000012858) DMRT1 (ENSHGLG00000043033) KANK1 (ENSHGLG00000012000) ENSHGLG00000045832 ENSHGLG00000050403 DOCK8 (ENSHGLG00000016578) ENSHGLG00000020779 #22 CBWD3 (ENSHGLG00000015962) ENSHGLG00000046909 PGM5 (ENSHGLG00000013086) TMEM252 (ENSHGLG00000033131) ENSHGLG00000040794 ENSHGLG00000045896 PABIR1 (ENSHGLG00000021429) PIP5K1B (ENSHGLG00000015519) FXN (ENSHGLG00000013859) TJP2 (ENSHGLG00000015590) ENSHGLG00000031959 ENTREP1 (ENSHGLG00000014108) ENSHGLG00000021076 APBA1 (ENSHGLG00000007815) ENSHGLG00000035765 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 2 ENSHGLG00000039341 ENSHGLG00000018160 PDS5B (ENSHGLG00000006670) ENSHGLG00000006974 KL (ENSHGLG00000005334) ENSHGLG00000018786 ENSHGLG00000032772 ENSHGLG00000021355 ENSHGLG00000019417 ENSHGLG00000021428 ENSHGLG00000013996 ENSHGLG00000004608 MAB21L1 (ENSHGLG00000035394) ENSHGLG00000003756 ENSHGLG00000037090 ENSHGLG00000003703 #22 ENSHGLG00000010793 CCDC169 (ENSHGLG00000032864) SPG20 (ENSHGLG00000003791) CCNA1 (ENSHGLG00000002880) SERTM1 (ENSHGLG00000047070) RFXAP (ENSHGLG00000004899) ENSHGLG00000050490 ALG5 (ENSHGLG00000003783) EXOSC8 (ENSHGLG00000002963) SUPT20H (ENSHGLG00000013900) ENSHGLG00000021175 POSTN (ENSHGLG00000000277) TRPC4 (ENSHGLG00000000330) ENSHGLG00000000363 FREM2 (ENSHGLG00000000398) Naked mole-rat female MODERN SPECIES 30 ENSHGLG00000048702 ENSHGLG00000001971 ENSHGLG00000000221 ENSHGLG00000033193 ENSHGLG00000034757 ENSHGLG00000039296 ENSHGLG00000034656 ENSHGLG00000044284 ENSHGLG00000033332 ENSHGLG00000008507 ENSHGLG00000048640 ENSHGLG00000049420 PMS1 (ENSHGLG00000037505) ENSHGLG00000019772 ENSHGLG00000002523 ENSHGLG00000042502 #22 ENSHGLG00000049973 ENSHGLG00000019493 ENSHGLG00000047695 ENSHGLG00000039573 ENSHGLG00000011573 ENSHGLG00000012521 ENSHGLG00000046512 ADNP2 (ENSHGLG00000033188) ENSHGLG00000042552 ENSHGLG00000032332 ENSHGLG00000038675 ENSHGLG00000037787 ENSHGLG00000034431 ENSHGLG00000035275 ENSHGLG00000038818 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000032924 ENSHGLG00000042766 ENSHGLG00000034367 ENSHGLG00000038645 ENSHGLG00000000175 ENSHGLG00000037631 ENSHGLG00000032834 ENSHGLG00000042678 ENSHGLG00000007029 ENSHGLG00000000188 ENSHGLG00000046083 ENSHGLG00000038259 ENSHGLG00000041060 ENSHGLG00000044426 ENSHGLG00000047327 ENSHGLG00000019892 #22 ENSHGLG00000002392 ENSHGLG00000002330 ENSHGLG00000050758 ENSHGLG00000040327 ENSHGLG00000002242 TSPAN6 (ENSHGLG00000042596) SRPX2 (ENSHGLG00000001326) ENSHGLG00000003770 ENSHGLG00000034333 ENSHGLG00000045820 ENSHGLG00000050470 ENSHGLG00000019778 ENSHGLG00000001633 ENSHGLG00000042291 ENSHGLG00000033611 Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000037583 ENSHGLG00000004407 ENSHGLG00000039059 SOX3 (ENSHGLG00000039208) ENSHGLG00000047068 ATP11C (ENSHGLG00000007759) ENSHGLG00000009095 MCF2 (ENSHGLG00000013161) F9 (ENSHGLG00000050058) ENSHGLG00000034867 ENSHGLG00000034873 ENSHGLG00000033865 ENSHGLG00000007629 ENSHGLG00000040882 ENSHGLG00000046515 ENSHGLG00000010972 #22 ENSHGLG00000041497 ENSHGLG00000033794 GPR101 (ENSHGLG00000044397) ENSHGLG00000011055 ARHGEF6 (ENSHGLG00000004195) ENSHGLG00000045770 CD40LG (ENSHGLG00000046347) VGLL1 (ENSHGLG00000037465) HTATSF1 (ENSHGLG00000005328) BRS3 (ENSHGLG00000018193) ADGRG4 (ENSHGLG00000018882) ENSHGLG00000007640 FHL1 (ENSHGLG00000018952) SLC9A6 (ENSHGLG00000018809) ENSHGLG00000042796 Primates ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Lemuriformes ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Mouse lemur MODERN SPECIES 31 NCOA2 (ENSMICG00000002452) PRDM14 (ENSMICG00000002448) SLCO5A1 (ENSMICG00000010526) TRPA1 (ENSMICG00000001691) ENSMICG00000042578 ZFHX4 (ENSMICG00000008252) ENSMICG00000030756 ENSMICG00000044291 PKIA (ENSMICG00000045782) ZC2HC1A (ENSMICG00000028311) IL7 (ENSMICG00000007412) STMN2 (ENSMICG00000026842) HEY1 (ENSMICG00000001913) MRPS28 (ENSMICG00000044873) TPD52 (ENSMICG00000027857) ENSMICG00000044395 #22 ZBTB10 (ENSMICG00000007243) ZNF704 (ENSMICG00000001305) PAG1 (ENSMICG00000001308) ENSMICG00000001311 PMP2 (ENSMICG00000038741) FABP4 (ENSMICG00000005313) FABP9 (ENSMICG00000046393) FABP12 (ENSMICG00000048103) ENSMICG00000005324 ENSMICG00000026542 ZFAND1 (ENSMICG00000016889) CHMP4C (ENSMICG00000026865) SNX16 (ENSMICG00000013943) ENSMICG00000030669 ENSMICG00000030206 Haplorrhini ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Simiiformes ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Catarrhini ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Cercopithecinae ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Macaca ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Macaca_a ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Rhesus MODERN SPECIES 17 FAM177A1 (ENSMMUG00000060802) SRP54 (ENSMMUG00000015073) BAZ1A (ENSMMUG00000058073) CFL2 (ENSMMUG00000039560) SNX6 (ENSMMUG00000012576) ENSMMUG00000054661 EAPP (ENSMMUG00000056506) ENSMMUG00000054885 ENSMMUG00000018813 SPTSSA (ENSMMUG00000049364) ENSMMUG00000057166 ENSMMUG00000064654 EGLN3 (ENSMMUG00000000040) ENSMMUG00000054677 NPAS3 (ENSMMUG00000014839) ENSMMUG00000062990 #22 AKAP6 (ENSMMUG00000015128) ARHGAP5 (ENSMMUG00000016346) ENSMMUG00000056320 ENSMMUG00000054094 NUBPL (ENSMMUG00000012726) GPR33 (ENSMMUG00000015703) DTD2 (ENSMMUG00000050472) HEATR5A (ENSMMUG00000011779) HECTD1 (ENSMMUG00000003120) AP4S1 (ENSMMUG00000003123) STRN3 (ENSMMUG00000011515) COCH (ENSMMUG00000011514) SCFD1 (ENSMMUG00000019692) G2E3 (ENSMMUG00000019691) ENSMMUG00000064617 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Drill MODERN SPECIES 1304 ENSMLEG00000031390 EGLN3 (ENSMLEG00000032022) ENSMLEG00000039479 NPAS3 (ENSMLEG00000043179) AKAP6 (ENSMLEG00000036457) ENSMLEG00000036445 #22 ENSMLEG00000009505 ARHGAP5 (ENSMLEG00000039354) ENSMLEG00000026995 NUBPL (ENSMLEG00000003291) ENSMLEG00000006609 Olive baboon MODERN SPECIES 17 NFKBIA (ENSPANG00000021245) PSMA6 (ENSPANG00000029375) PRORP (ENSPANG00000025053) PPP2R3C (ENSPANG00000024268) FAM177A1 (ENSPANG00000038043) SRP54 (ENSPANG00000023853) BAZ1A (ENSPANG00000021332) CFL2 (ENSPANG00000021779) ENSPANG00000022563 EAPP (ENSPANG00000018424) SPTSSA (ENSPANG00000044993) ENSPANG00000039055 EGLN3 (ENSPANG00000047484) NPAS3 (ENSPANG00000021333) AKAP6 (ENSPANG00000022397) ENSPANG00000038010 #22 ENSPANG00000038472 ARHGAP5 (ENSPANG00000024272) ENSPANG00000047627 NUBPL (ENSPANG00000021781) GPR33 (ENSPANG00000021666) DTD2 (ENSPANG00000021336) HEATR5A (ENSPANG00000000801) HECTD1 (ENSPANG00000017149) ENSPANG00000017427 STRN3 (ENSPANG00000020458) COCH (ENSPANG00000011160) ENSPANG00000038938 SCFD1 (ENSPANG00000016614) G2E3 (ENSPANG00000015300) PRKD1 (ENSPANG00000009943) Laurasiatheria ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Artiodactyla ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Pecora ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Percora_a ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Bovidae ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Bovinae ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Bos ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Bos_a ANCESTRAL SPECIES 5 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.db.c.c ENSGT00390000007772.db.c.d ENSGT00390000007772.db.d.g ENSGT00390000007772.db.d.h ENSGT00390000007772.eb ENSGT00390000006095 ENSGT00900000141083.d.a ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.c.a #22 ENSGT01030000234629.C #23 ENSGT00910000144184.r ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000171658.a ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b.eb ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b Domestic yak MODERN SPECIES FAIM (ENSBGRG00000001673) PIK3CB (ENSBGRG00000001650) FOXL2 (ENSBGRG00000001637) ENSBGRG00000001624 ENSBGRG00000001619 ENSBGRG00000001609 ENSBGRG00000001602 ENSBGRG00000001595 MRPS22 (ENSBGRG00000001541) ENSBGRG00000001520 RBP2 (ENSBGRG00000001501) NMNAT3 (ENSBGRG00000001428) CLSTN2 (ENSBGRG00000001375) #24 TRIM42 (ENSBGRG00000001357) ENSBGRG00000001349 SLC25A36 (ENSBGRG00000001317) #22 SPSB4 (ENSBGRG00000001297) #23 ENSBGRG00000001284 PXYLP1 (ENSBGRG00000001263) ZBTB38 (ENSBGRG00000001246) RASA2 (ENSBGRG00000001166) RNF7 (ENSBGRG00000001134) GRK7 (ENSBGRG00000001107) ATP1B3 (ENSBGRG00000001064) ENSBGRG00000001057 TFDP2 (ENSBGRG00000001010) GK5 (ENSBGRG00000000970) XRN1 (ENSBGRG00000000705) ATR (ENSBGRG00000000428) PLS1 (ENSBGRG00000000350) TRPC1 (ENSBGRG00000000286) Cetacea ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Blue whale MODERN SPECIES 10 ENSBMSG00010018180 ENSBMSG00010018203 ENSBMSG00010018244 ZNF805 (ENSBMSG00010018298) AURKC (ENSBMSG00010018326) ZNF264 (ENSBMSG00010018348) ENSBMSG00010018383 ENSBMSG00010018399 ENSBMSG00010018415 ENSBMSG00010018464 ENSBMSG00010018534 ZFP28 (ENSBMSG00010018605) ZNF470 (ENSBMSG00010018649) ZNF471 (ENSBMSG00010018695) ENSBMSG00010018735 ENSBMSG00010018758 #22 ENSBMSG00010018775 ZNF667 (ENSBMSG00010018797) ENSBMSG00010018823 ENSBMSG00010018862 ZNF444 (ENSBMSG00010018891) ZNF787 (ENSBMSG00010018928) NLRP5 (ENSBMSG00010018963) NLRP8 (ENSBMSG00010019003) NLRP13 (ENSBMSG00010019062) NLRP9 (ENSBMSG00010019259) ENSBMSG00010019868 ENSBMSG00010019891 EPN1 (ENSBMSG00010019952) U2AF2 (ENSBMSG00010019987) CCDC106 (ENSBMSG00010020015) Odontoceti ANCESTRAL SPECIES 118 ENSGT00950000182890.C ENSGT00940000154369.c.a #22 Sperm whale MODERN SPECIES 8 ENSPCTG00005010924 ZNF304 (ENSPCTG00005010859) ENSPCTG00005010820 AURKC (ENSPCTG00005010628) ENSPCTG00005010453 PEG3 (ENSPCTG00005010336) ENSPCTG00005010274 ENSPCTG00005010189 ENSPCTG00005010116 ENSPCTG00005009918 ENSPCTG00005009823 ZNF470 (ENSPCTG00005009701) ZNF71 (ENSPCTG00005009668) ENSPCTG00005009564 ENSPCTG00005009515 ENSPCTG00005009470 #22 ZNF582 (ENSPCTG00005009434) ZNF583 (ENSPCTG00005009409) ZNF667 (ENSPCTG00005009390) ZNF444 (ENSPCTG00005009304) ZSCAN5B (ENSPCTG00005009248) ZNF787 (ENSPCTG00005009211) NLRP5 (ENSPCTG00005009090) NLRP8 (ENSPCTG00005008982) NLRP9 (ENSPCTG00005008820) ENSPCTG00005008776 ENSPCTG00005008761 ENSPCTG00005008732 EPN1 (ENSPCTG00005008604) NAT14 (ENSPCTG00005008522) ENSPCTG00005008464 Odontoceti_a ANCESTRAL SPECIES 119 ENSGT00950000182890.C ENSGT00940000154369.c.a #22 Odontoceti_b ANCESTRAL SPECIES 8 ENSGT00390000017601 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT00950000184123 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00950000185419 ENSGT00940000154788.ib.b.b.a ENSGT00940000154369.c.a #22 ENSGT00940000157772 ENSGT00530000064170.e ENSGT01020000230598 ENSGT00390000007535.b.a ENSGT00390000006684 ENSGT00940000156806 ENSGT00940000153558.b.i.b.a.a.h ENSGT00940000155007 ENSGT00940000155244 ENSGT00450000040296 ENSGT00550000074817 ENSGT00940000156325 ENSGT00940000159054 ENSGT00940000157242 ENSGT00390000018619 Vaquita DUPLICATION Vaquita MODERN SPECIES 17 IZUMO3 (ENSPSNG00000001537) ENSPSNG00000001579 TUSC1 (ENSPSNG00000001586) CAAP1 (ENSPSNG00000001609) PLAA (ENSPSNG00000001649) IFT74 (ENSPSNG00000001698) LRRC19 (ENSPSNG00000001725) TEK (ENSPSNG00000001842) ENSPSNG00000001974 MOB3B (ENSPSNG00000001987) IFNK (ENSPSNG00000002003) C9orf72 (ENSPSNG00000002018) LINGO2 (ENSPSNG00000002038) ENSPSNG00000002047 ENSPSNG00000002077 ENSPSNG00000002105 #22 ACO1 (ENSPSNG00000002130) ENSPSNG00000002178 TOPORS (ENSPSNG00000002196) SMIM27 (ENSPSNG00000002212) ENSPSNG00000002234 TMEM215 (ENSPSNG00000002251) APTX (ENSPSNG00000002301) ENSPSNG00000002376 SMU1 (ENSPSNG00000002392) B4GALT1 (ENSPSNG00000002474) BAG1 (ENSPSNG00000002526) CHMP5 (ENSPSNG00000002557) NFX1 (ENSPSNG00000002583) ENSPSNG00000002630 ENSPSNG00000002719 Vaquita MODERN SPECIES 10 ENSPSNG00000015127 ENSPSNG00000015342 ENSPSNG00000015371 ENSPSNG00000015396 ENSPSNG00000015476 ENSPSNG00000015626 ENSPSNG00000015712 ENSPSNG00000015795 ZFP28 (ENSPSNG00000015821) ZNF470 (ENSPSNG00000015974) ZNF71 (ENSPSNG00000016086) SMIM17 (ENSPSNG00000016183) ENSPSNG00000016198 ZNF471 (ENSPSNG00000016218) ENSPSNG00000016279 ENSPSNG00000016304 #22 ENSPSNG00000016359 ZNF667 (ENSPSNG00000016393) ENSPSNG00000016461 ZNF444 (ENSPSNG00000016522) ZNF787 (ENSPSNG00000016570) NLRP5 (ENSPSNG00000016644) NLRP8 (ENSPSNG00000016940) NLRP9 (ENSPSNG00000017077) ENSPSNG00000017198 ENSPSNG00000017266 EPN1 (ENSPSNG00000017341) U2AF2 (ENSPSNG00000017435) CCDC106 (ENSPSNG00000017514) ZNF581 (ENSPSNG00000017612) ZNF580 (ENSPSNG00000017641) Monodontidae ANCESTRAL SPECIES 3 ENSGT00940000163177.r ENSGT00940000161016.A.a ENSGT00950000182890.D.c.b.a.b.a.b ENSGT00940000159953.B.a.a ENSGT00940000161619 ENSGT00940000162525 ENSGT00560000078607.A.b.b ENSGT01100000263552.g.b.a.b ENSGT00940000162376 ENSGT00940000163087 ENSGT00940000163677.a.b.a.a.a.b.a ENSGT00940000163774 ENSGT00490000044430 ENSGT00940000161954.f ENSGT00940000162794 ENSGT00940000154369.c.a #22 ENSGT00940000161925 ENSGT00390000021477 ENSGT00940000154432 ENSGT00940000163048.i ENSGT00940000162893 ENSGT00940000163064 ENSGT00940000162898 ENSGT00940000163909 ENSGT00940000163218 ENSGT00940000163187 ENSGT00940000160411 ENSGT00940000155556.d ENSGT00390000013183 ENSGT00940000163608 ENSGT00940000163086 Narwhal MODERN SPECIES 296 ENSMMNG00015000445 ZNF805 (ENSMMNG00015000417) AURKC (ENSMMNG00015000396) ENSMMNG00015000369 ENSMMNG00015000297 ENSMMNG00015000277 ENSMMNG00015000266 ENSMMNG00015000254 ZFP28 (ENSMMNG00015000228) ZNF470 (ENSMMNG00015000201) ZNF71 (ENSMMNG00015000162) ENSMMNG00015000142 SMIM17 (ENSMMNG00015000122) ZNF471 (ENSMMNG00015000097) ENSMMNG00015000073 ENSMMNG00015000059 #22 ENSMMNG00015000034 ENSMMNG00015003841 ZNF667 (ENSMMNG00015003823) ENSMMNG00015003799 ZNF444 (ENSMMNG00015003768) ZNF787 (ENSMMNG00015003755) NLRP5 (ENSMMNG00015003682) NLRP8 (ENSMMNG00015003546) NLRP9 (ENSMMNG00015003516) ENSMMNG00015003476 EPN1 (ENSMMNG00015003437) U2AF2 (ENSMMNG00015003391) CCDC106 (ENSMMNG00015003349) ZNF581 (ENSMMNG00015003326) ZNF580 (ENSMMNG00015003315) Beluga whale DUPLICATION Beluga whale MODERN SPECIES 50 ELAVL2 (ENSDLEG00000020736) IZUMO3 (ENSDLEG00000020742) ENSDLEG00000020744 TUSC1 (ENSDLEG00000020748) ENSDLEG00000020753 CAAP1 (ENSDLEG00000020758) PLAA (ENSDLEG00000020764) IFT74 (ENSDLEG00000020767) LRRC19 (ENSDLEG00000020775) TEK (ENSDLEG00000020783) MOB3B (ENSDLEG00000020809) IFNK (ENSDLEG00000020813) CUNH9orf72 (ENSDLEG00000020817) LINGO2 (ENSDLEG00000020824) ENSDLEG00000020832 ENSDLEG00000020841 #22 ACO1 (ENSDLEG00000020847) TOPORS (ENSDLEG00000020871) NDUFB6 (ENSDLEG00000020877) TMEM215 (ENSDLEG00000020888) APTX (ENSDLEG00000020896) DNAJA1 (ENSDLEG00000020908) SMU1 (ENSDLEG00000020915) B4GALT1 (ENSDLEG00000020924) BAG1 (ENSDLEG00000020931) CHMP5 (ENSDLEG00000020937) NFX1 (ENSDLEG00000020947) ENSDLEG00000020955 ENSDLEG00000020958 TFCP2 (ENSDLEG00000020960) ENSDLEG00000007746 Beluga whale MODERN SPECIES 14 ENSDLEG00000001282 ENSDLEG00000001290 ENSDLEG00000001303 ZNF805 (ENSDLEG00000001315) AURKC (ENSDLEG00000001323) PEG3 (ENSDLEG00000001351) ENSDLEG00000001372 ENSDLEG00000001389 ZFP28 (ENSDLEG00000001400) ZNF470 (ENSDLEG00000001414) ENSDLEG00000001427 ZNF71 (ENSDLEG00000001429) SMIM17 (ENSDLEG00000001436) ZNF471 (ENSDLEG00000001443) ZNF582 (ENSDLEG00000001451) ENSDLEG00000001464 #22 ZNF583 (ENSDLEG00000001471) ZNF667 (ENSDLEG00000001493) ENSDLEG00000001506 ENSDLEG00000001515 ZNF444 (ENSDLEG00000001529) ZNF787 (ENSDLEG00000001537) NLRP5 (ENSDLEG00000001552) NLRP8 (ENSDLEG00000001601) NLRP9 (ENSDLEG00000001669) ENSDLEG00000001881 EPN1 (ENSDLEG00000001891) U2AF2 (ENSDLEG00000001899) CCDC106 (ENSDLEG00000001913) ZNF581 (ENSDLEG00000001929) ZNF580 (ENSDLEG00000001934) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Carnivora ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 Caniformia ANCESTRAL SPECIES ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Canidae ANCESTRAL SPECIES 24 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Canis_lupus ANCESTRAL SPECIES 27 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00390000007772.y.b ENSGT00390000007772.z ENSGT00390000007772.y.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00950000185721 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00980000200423 ENSGT00950000183097.a.b Dingo MODERN SPECIES 80 CEP70 (ENSCAFG00020008176) ENSCAFG00020008186 FAIM (ENSCAFG00020008189) PIK3CB (ENSCAFG00020008199) ENSCAFG00020008227 ENSCAFG00020008230 ENSCAFG00020008234 ENSCAFG00020008235 ENSCAFG00020008237 COPB2 (ENSCAFG00020008249) RBP2 (ENSCAFG00020008262) RBP1 (ENSCAFG00020008276) NMNAT3 (ENSCAFG00020008280) CLSTN2 (ENSCAFG00020008307) #24 TRIM42 (ENSCAFG00020008472) ENSCAFG00020008476 #22 ENSCAFG00020008487 #22 SPSB4 (ENSCAFG00020008496) #23 PXYLP1 (ENSCAFG00020008503) ZBTB38 (ENSCAFG00020008519) RASA2 (ENSCAFG00020008540) ENSCAFG00020008615 ENSCAFG00020008621 GRK7 (ENSCAFG00020008625) ATP1B3 (ENSCAFG00020008628) TFDP2 (ENSCAFG00020008640) GK5 (ENSCAFG00020008666) XRN1 (ENSCAFG00020009120) ATR (ENSCAFG00020009248) ENSCAFG00020009852 PLS1 (ENSCAFG00020009887) Red fox MODERN SPECIES 154 ARMC8 (ENSVVUG00000026584) NME9 (ENSVVUG00000026576) MRAS (ENSVVUG00000026571) ESYT3 (ENSVVUG00000026562) CEP70 (ENSVVUG00000026556) ENSVVUG00000026555 FAIM (ENSVVUG00000026552) PIK3CB (ENSVVUG00000026537) ENSVVUG00000026525 MRPS22 (ENSVVUG00000026523) COPB2 (ENSVVUG00000026520) RBP2 (ENSVVUG00000026518) NMNAT3 (ENSVVUG00000026514) CLSTN2 (ENSVVUG00000026267) #24 TRIM42 (ENSVVUG00000026257) ENSVVUG00000026251 #22 ENSVVUG00000026249 #22 SPSB4 (ENSVVUG00000026246) #23 ENSVVUG00000026242 ZBTB38 (ENSVVUG00000026241) ENSVVUG00000026240 RASA2 (ENSVVUG00000026237) RNF7 (ENSVVUG00000026234) GRK7 (ENSVVUG00000026233) ATP1B3 (ENSVVUG00000026231) TFDP2 (ENSVVUG00000026228) GK5 (ENSVVUG00000026188) XRN1 (ENSVVUG00000024461) ATR (ENSVVUG00000024124) PLS1 (ENSVVUG00000021572) TRPC1 (ENSVVUG00000021513) Caniformia_b ANCESTRAL SPECIES ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Ursidae ANCESTRAL SPECIES 1 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522.n ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Ursus ANCESTRAL SPECIES 14 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522.n ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 American black bear MODERN SPECIES 1640 ENSUAMG00000013183 #22 ENSUAMG00000013182 #22 SPSB4 (ENSUAMG00000013181) #23 PXYLP1 (ENSUAMG00000013180) Polar bear MODERN SPECIES 112 ARMC8 (ENSUMAG00000015000) ENSUMAG00000014994 MRAS (ENSUMAG00000014965) ESYT3 (ENSUMAG00000014888) CEP70 (ENSUMAG00000014864) FAIM (ENSUMAG00000014858) PIK3CB (ENSUMAG00000014852) ENSUMAG00000014826 ENSUMAG00000014822 MRPS22 (ENSUMAG00000014808) COPB2 (ENSUMAG00000014799) RBP2 (ENSUMAG00000014792) NMNAT3 (ENSUMAG00000014788) CLSTN2 (ENSUMAG00000014685) #24 TRIM42 (ENSUMAG00000014662) ENSUMAG00000014634 #22 ENSUMAG00000014622 #22 PXYLP1 (ENSUMAG00000014596) ZBTB38 (ENSUMAG00000014585) RASA2 (ENSUMAG00000013878) RNF7 (ENSUMAG00000013758) GRK7 (ENSUMAG00000013754) ATP1B3 (ENSUMAG00000013750) TFDP2 (ENSUMAG00000013741) GK5 (ENSUMAG00000013679) XRN1 (ENSUMAG00000013625) ATR (ENSUMAG00000013217) PLS1 (ENSUMAG00000013168) TRPC1 (ENSUMAG00000012988) PCOLCE2 (ENSUMAG00000012927) PAQR9 (ENSUMAG00000012908) Mustelinae ANCESTRAL SPECIES ENSGT00940000154369.c.a #22 American mink MODERN SPECIES 133 GPAT3 (ENSNVIG00000004017) ABRAXAS1 (ENSNVIG00000004035) MRPS18C (ENSNVIG00000004056) HELQ (ENSNVIG00000004072) HPSE (ENSNVIG00000004142) ENSNVIG00000004169 #22 ENSNVIG00000004178 ENSNVIG00000004190 PLAC8 (ENSNVIG00000004230) COPS4 (ENSNVIG00000004246) LIN54 (ENSNVIG00000004292) THAP9 (ENSNVIG00000004414) SEC31A (ENSNVIG00000004445) SCD5 (ENSNVIG00000004692) T150C (ENSNVIG00000004713) ENOPH1 (ENSNVIG00000004745) ENSNVIG00000004759 HNRNPD (ENSNVIG00000004778) ENSNVIG00000004837 RASGEF1B (ENSNVIG00000004857) PRKG2 (ENSNVIG00000004908) Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154369.c.b #22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000154369.c.b #22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000154369.c.b #22 Glires ANCESTRAL SPECIES ENSGT00940000154369.c.b #22 Rodentia ANCESTRAL SPECIES ENSGT00940000154369.c.b #22 Rodentia_A ANCESTRAL SPECIES ENSGT00940000154369.c.b #22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000154369.c.b #22 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000036714 ENSHGLG00000047228 SFMBT2 (ENSHGLG00000037639) ITIH5 (ENSHGLG00000011827) ENSHGLG00000006958 ITIH2 (ENSHGLG00000018567) KIN (ENSHGLG00000005095) Atp5f1c (ENSHGLG00000045723) ENSHGLG00000041554 TAF3 (ENSHGLG00000008290) ENSHGLG00000050450 ENSHGLG00000038697 ENSHGLG00000035414 ENSHGLG00000020814 ENSHGLG00000050579 ENSHGLG00000045477 #22 ENSHGLG00000017139 ENSHGLG00000039822 ENSHGLG00000014055 ENSHGLG00000042375 ENSHGLG00000001374 ENSHGLG00000042740 ECHDC3 (ENSHGLG00000038864) PROSER2 (ENSHGLG00000046574) ENSHGLG00000015176 ENSHGLG00000018501 PFKP (ENSHGLG00000009173) ENSHGLG00000040372 ENSHGLG00000018945 ADARB2 (ENSHGLG00000014550) ENSHGLG00000039263 Naked mole-rat female MODERN SPECIES 25 ENSHGLG00000036506 ENSHGLG00000038073 ENSHGLG00000042570 ENSHGLG00000048068 ENSHGLG00000043201 ENSHGLG00000008871 ENSHGLG00000009574 ENSHGLG00000049662 NR2F1 (ENSHGLG00000009458) POU5F2 (ENSHGLG00000013034) FAM172A (ENSHGLG00000011178) KIAA0825 (ENSHGLG00000014311) SLF1 (ENSHGLG00000014354) MCTP1 (ENSHGLG00000005301) FAM81B (ENSHGLG00000007192) ENSHGLG00000048654 #22 SKIC3 (ENSHGLG00000008877) ARSK (ENSHGLG00000005198) ENSHGLG00000005654 GPR150 (ENSHGLG00000007069) ENSHGLG00000040806 SPATA9 (ENSHGLG00000004797) ENSHGLG00000004921 GLRX (ENSHGLG00000005062) ENSHGLG00000005783 ENSHGLG00000006449 ENSHGLG00000042299 PCSK1 (ENSHGLG00000007524) ENSHGLG00000041240 ENSHGLG00000004596 ENSHGLG00000008968 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 8 ENSHGLG00000039977 ENSHGLG00000000518 ENSHGLG00000049232 ENSHGLG00000019649 ENSHGLG00000002824 ENSHGLG00000013299 ENSHGLG00000047428 ENSHGLG00000010762 ENSHGLG00000043644 ENSHGLG00000036703 Slc16a7 (ENSHGLG00000036881) ENSHGLG00000040614 ENSHGLG00000037422 ENSHGLG00000044059 ENSHGLG00000050491 ENSHGLG00000016613 #22 FAM19A2 (ENSHGLG00000035697) ENSHGLG00000034106 ENSHGLG00000016056 ENSHGLG00000016131 ENSHGLG00000039710 ENSHGLG00000049877 ENSHGLG00000013476 ENSHGLG00000034771 ENSHGLG00000016300 ENSHGLG00000035338 RXYLT1 (ENSHGLG00000014305) ENSHGLG00000035246 SRGAP1 (ENSHGLG00000009171) KICS2 (ENSHGLG00000036040) ENSHGLG00000036595 Naked mole-rat female MODERN SPECIES ENSHGLG00000006115 ENSHGLG00000033230 ##10 RGS17 (ENSHGLG00000007180) ENSHGLG00000003207 ENSHGLG00000003375 FBXO5 (ENSHGLG00000003460) ENSHGLG00000003666 VIP (ENSHGLG00000003764) MYCT1 (ENSHGLG00000003966) ENSHGLG00000004180 ENSHGLG00000047622 ENSHGLG00000041227 ENSHGLG00000005683 ESR1 (ENSHGLG00000001873) ENSHGLG00000016358 ENSHGLG00000046338 #22 CCDC170 (ENSHGLG00000002356) ARMT1 (ENSHGLG00000046933) RMND1 (ENSHGLG00000006256) ZBTB2 (ENSHGLG00000041496) AKAP12 (ENSHGLG00000008686) MTHFD1L (ENSHGLG00000010567) ENSHGLG00000003082 ENSHGLG00000046296 ENSHGLG00000012265 ENSHGLG00000036728 ENSHGLG00000012404 ENSHGLG00000012691 ENSHGLG00000039077 ENSHGLG00000035878 ENSHGLG00000006945 Naked mole-rat female MODERN SPECIES 23 FAF2 (ENSHGLG00000033567) CLTB (ENSHGLG00000048248) HIGD2A (ENSHGLG00000038701) NOP16 (ENSHGLG00000045329) ARL10 (ENSHGLG00000005509) ENSHGLG00000005591 ENSHGLG00000040734 ENSHGLG00000006385 ENSHGLG00000036140 ENSHGLG00000034727 THOC3 (ENSHGLG00000008773) CPLX2 (ENSHGLG00000033963) HRH2 (ENSHGLG00000018733) SFXN1 (ENSHGLG00000045847) DRD1 (ENSHGLG00000016781) ENSHGLG00000036934 #22 ENSHGLG00000049074 MSX2 (ENSHGLG00000017569) NSG2 (ENSHGLG00000006062) ENSHGLG00000041184 ENSHGLG00000049916 C5orf47 (ENSHGLG00000040572) CPEB4 (ENSHGLG00000008897) ENSHGLG00000041881 STC2 (ENSHGLG00000017592) NKX2-5 (ENSHGLG00000017269) BNIP1 (ENSHGLG00000018031) ENSHGLG00000017817 ENSHGLG00000021190 ENSHGLG00000018219 ENSHGLG00000017100 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 5 ENSHGLG00000048989 SLC13A1 (ENSHGLG00000019390) IQUB (ENSHGLG00000007200) NDUFA5 (ENSHGLG00000042692) ASB15 (ENSHGLG00000004129) LMOD2 (ENSHGLG00000003814) WASL (ENSHGLG00000008493) ENSHGLG00000007516 SPAM1 (ENSHGLG00000006133) TMEM229A (ENSHGLG00000039371) ENSHGLG00000036156 GPR37 (ENSHGLG00000032710) POT1 (ENSHGLG00000003954) ENSHGLG00000042213 ENSHGLG00000049918 ENSHGLG00000002212 #22 ENSHGLG00000007144 ENSHGLG00000006403 ENSHGLG00000005743 ENSHGLG00000010213 ENSHGLG00000016657 ENSHGLG00000041627 NPVF (ENSHGLG00000017985) NFE2L3 (ENSHGLG00000017200) ENSHGLG00000015396 ENSHGLG00000014772 ENSHGLG00000050650 SKAP2 (ENSHGLG00000042970) ENSHGLG00000045030 ENSHGLG00000036434 HOXA1 (ENSHGLG00000018117) Naked mole-rat female MODERN SPECIES 19 PAPSS1 (ENSHGLG00000001783) ENSHGLG00000044153 DKK2 (ENSHGLG00000032510) GIMD1 (ENSHGLG00000003404) AIMP1 (ENSHGLG00000003860) TBCK (ENSHGLG00000008209) ENSHGLG00000034242 NPNT (ENSHGLG00000001987) GSTCD (ENSHGLG00000001718) ENSHGLG00000050195 INTS12 (ENSHGLG00000002096) ARHGEF38 (ENSHGLG00000034470) ENSHGLG00000001427 PPA2 (ENSHGLG00000001457) ENSHGLG00000037331 ENSHGLG00000000800 #22 ENSHGLG00000001051 ENSHGLG00000020122 ENSHGLG00000000542 SLC9B2 (ENSHGLG00000034315) ENSHGLG00000040534 ENSHGLG00000003170 ENSHGLG00000004201 ENSHGLG00000004957 ENSHGLG00000037895 ENSHGLG00000002727 ENSHGLG00000038348 SLC39A8 (ENSHGLG00000034409) ENSHGLG00000003263 ENSHGLG00000042982 BANK1 (ENSHGLG00000002512) Lagomorpha ANCESTRAL SPECIES ENSGT00940000154369.c.b #22 Rabbit MODERN SPECIES 14 ENSOCUG00000023338 SYBU (ENSOCUG00000004730) EBAG9 (ENSOCUG00000004726) PKHD1L1 (ENSOCUG00000004688) ENY2 (ENSOCUG00000030501) NUDCD1 (ENSOCUG00000004673) TRHR (ENSOCUG00000003833) ENSOCUG00000039638 ENSOCUG00000037614 TMEM74 (ENSOCUG00000000175) EMC2 (ENSOCUG00000002461) ENSOCUG00000027337 EIF3E (ENSOCUG00000008050) RSPO2 (ENSOCUG00000000779) ANGPT1 (ENSOCUG00000003722) ENSOCUG00000023959 #22 ABRA (ENSOCUG00000006570) OXR1 (ENSOCUG00000000462) ZFPM2 (ENSOCUG00000005930) LRP12 (ENSOCUG00000002245) DPYS (ENSOCUG00000011148) ENSOCUG00000004398 ENSOCUG00000025731 ENSOCUG00000033506 RIMS2 (ENSOCUG00000011775) SLC25A32 (ENSOCUG00000009191) DCAF13 (ENSOCUG00000009197) FZD6 (ENSOCUG00000009180) ENSOCUG00000021507 ENSOCUG00000013717 ATP6V1C1 (ENSOCUG00000017814) Laurasiatheria ANCESTRAL SPECIES ENSGT00940000154369.c.b #22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000154369.c.b #22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000154369.c.b #22 Carnivora ANCESTRAL SPECIES ENSGT00940000154369.c.b #22 Caniformia ANCESTRAL SPECIES ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Caniformia_b ANCESTRAL SPECIES ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Ursidae ANCESTRAL SPECIES 1 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522.n ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Ursus ANCESTRAL SPECIES 14 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522.n ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Polar bear MODERN SPECIES 112 ENSUMAG00000014994 MRAS (ENSUMAG00000014965) ESYT3 (ENSUMAG00000014888) CEP70 (ENSUMAG00000014864) FAIM (ENSUMAG00000014858) PIK3CB (ENSUMAG00000014852) ENSUMAG00000014826 ENSUMAG00000014822 MRPS22 (ENSUMAG00000014808) COPB2 (ENSUMAG00000014799) RBP2 (ENSUMAG00000014792) NMNAT3 (ENSUMAG00000014788) CLSTN2 (ENSUMAG00000014685) #24 TRIM42 (ENSUMAG00000014662) ENSUMAG00000014634 #22 ENSUMAG00000014622 #22 PXYLP1 (ENSUMAG00000014596) ZBTB38 (ENSUMAG00000014585) RASA2 (ENSUMAG00000013878) RNF7 (ENSUMAG00000013758) GRK7 (ENSUMAG00000013754) ATP1B3 (ENSUMAG00000013750) TFDP2 (ENSUMAG00000013741) GK5 (ENSUMAG00000013679) XRN1 (ENSUMAG00000013625) ATR (ENSUMAG00000013217) PLS1 (ENSUMAG00000013168) TRPC1 (ENSUMAG00000012988) PCOLCE2 (ENSUMAG00000012927) PAQR9 (ENSUMAG00000012908) SLC9A9 (ENSUMAG00000012650) American black bear MODERN SPECIES 1640 ENSUAMG00000013183 #22 ENSUAMG00000013182 #22 SPSB4 (ENSUAMG00000013181) #23 PXYLP1 (ENSUAMG00000013180) Canidae ANCESTRAL SPECIES 24 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Red fox MODERN SPECIES 154 NME9 (ENSVVUG00000026576) MRAS (ENSVVUG00000026571) ESYT3 (ENSVVUG00000026562) CEP70 (ENSVVUG00000026556) ENSVVUG00000026555 FAIM (ENSVVUG00000026552) PIK3CB (ENSVVUG00000026537) ENSVVUG00000026525 MRPS22 (ENSVVUG00000026523) COPB2 (ENSVVUG00000026520) RBP2 (ENSVVUG00000026518) NMNAT3 (ENSVVUG00000026514) CLSTN2 (ENSVVUG00000026267) #24 TRIM42 (ENSVVUG00000026257) ENSVVUG00000026251 #22 ENSVVUG00000026249 #22 SPSB4 (ENSVVUG00000026246) #23 ENSVVUG00000026242 ZBTB38 (ENSVVUG00000026241) ENSVVUG00000026240 RASA2 (ENSVVUG00000026237) RNF7 (ENSVVUG00000026234) GRK7 (ENSVVUG00000026233) ATP1B3 (ENSVVUG00000026231) TFDP2 (ENSVVUG00000026228) GK5 (ENSVVUG00000026188) XRN1 (ENSVVUG00000024461) ATR (ENSVVUG00000024124) PLS1 (ENSVVUG00000021572) TRPC1 (ENSVVUG00000021513) PCOLCE2 (ENSVVUG00000021509) Canis_lupus ANCESTRAL SPECIES 27 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00390000007772.y.b ENSGT00390000007772.z ENSGT00390000007772.y.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00950000185721 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00980000200423 ENSGT00950000183097.a.b ENSGT01060000248594.f Dingo MODERN SPECIES 80 ENSCAFG00020008186 FAIM (ENSCAFG00020008189) PIK3CB (ENSCAFG00020008199) ENSCAFG00020008227 ENSCAFG00020008230 ENSCAFG00020008234 ENSCAFG00020008235 ENSCAFG00020008237 COPB2 (ENSCAFG00020008249) RBP2 (ENSCAFG00020008262) RBP1 (ENSCAFG00020008276) NMNAT3 (ENSCAFG00020008280) CLSTN2 (ENSCAFG00020008307) #24 TRIM42 (ENSCAFG00020008472) ENSCAFG00020008476 #22 ENSCAFG00020008487 #22 SPSB4 (ENSCAFG00020008496) #23 PXYLP1 (ENSCAFG00020008503) ZBTB38 (ENSCAFG00020008519) RASA2 (ENSCAFG00020008540) ENSCAFG00020008615 ENSCAFG00020008621 GRK7 (ENSCAFG00020008625) ATP1B3 (ENSCAFG00020008628) TFDP2 (ENSCAFG00020008640) GK5 (ENSCAFG00020008666) XRN1 (ENSCAFG00020009120) ATR (ENSCAFG00020009248) ENSCAFG00020009852 PLS1 (ENSCAFG00020009887) TRPC1 (ENSCAFG00020010411) Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00910000147942 ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00910000147942 ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00910000147942 ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Carnivora ANCESTRAL SPECIES 10 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Caniformia ANCESTRAL SPECIES ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f Canidae ANCESTRAL SPECIES 24 ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f Canis_lupus ANCESTRAL SPECIES 27 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00390000007772.y.b ENSGT00390000007772.z ENSGT00390000007772.y.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00950000185721 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00980000200423 Dog MODERN SPECIES 15 ENSCAFG00845025659 ENSCAFG00845025691 FAIM (ENSCAFG00845025733) PIK3CB (ENSCAFG00845025921) PRR23A (ENSCAFG00845026853) ENSCAFG00845026883 ENSCAFG00845026940 ENSCAFG00845026965 MRPS22 (ENSCAFG00845027000) COPB2 (ENSCAFG00845027083) RBP2 (ENSCAFG00845027313) ENSCAFG00845027390 NMNAT3 (ENSCAFG00845027464) CLSTN2 (ENSCAFG00845027590) #24 TRIM42 (ENSCAFG00845027689) SLC25A36 (ENSCAFG00845027764) #22 SPSB4 (ENSCAFG00845027830) #23 PXYLP1 (ENSCAFG00845027868) ZBTB38 (ENSCAFG00845028009) RASA2 (ENSCAFG00845028112) ENSCAFG00845028197 ENSCAFG00845028212 GRK7 (ENSCAFG00845028236) ATP1B3 (ENSCAFG00845028285) TFDP2 (ENSCAFG00845028411) GK5 (ENSCAFG00845028559) XRN1 (ENSCAFG00845028618) ATR (ENSCAFG00845028753) ENSCAFG00845028887 PLS1 (ENSCAFG00845028912) TRPC1 (ENSCAFG00845028972) Caniformia_b ANCESTRAL SPECIES ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f Mustelinae ANCESTRAL SPECIES 59 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Ferret MODERN SPECIES 534 ENSMPUG00000012326 ENSMPUG00000012325 ENSMPUG00000012323 SLC25A36 (ENSMPUG00000012317) #22 SPSB4 (ENSMPUG00000012312) #23 PXYLP1 (ENSMPUG00000012309) American mink MODERN SPECIES 201 SLC25A36 (ENSNVIG00000013950) #22 SPSB4 (ENSNVIG00000013938) #23 PXYLP1 (ENSNVIG00000013915) ZBTB38 (ENSNVIG00000013906) ENSNVIG00000013900 RASA2 (ENSNVIG00000013822) RBX2 (ENSNVIG00000013786) GRK7 (ENSNVIG00000013769) ENSNVIG00000013754 ENSNVIG00000013749 TFDP2 (ENSNVIG00000013598) GK5 (ENSNVIG00000013575) XRN1 (ENSNVIG00000013389) ATR (ENSNVIG00000013314) PLS1 (ENSNVIG00000013238) TRPC1 (ENSNVIG00000013187) Ursidae ANCESTRAL SPECIES 1 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522.n ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT00940000154369.c.a #22 ENSGT00940000154369.c.b #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f Giant Panda MODERN SPECIES 16 ESYT3 (ENSAMEG00000006849) CEP70 (ENSAMEG00000004094) FAIM (ENSAMEG00000005221) PIK3CB (ENSAMEG00000005226) FOXL2 (ENSAMEG00000025713) ENSAMEG00000025901 ENSAMEG00000027748 ENSAMEG00000028418 COPB2 (ENSAMEG00000005657) RBP2 (ENSAMEG00000003834) RBP1 (ENSAMEG00000024877) ENSAMEG00000026229 ENSAMEG00000024606 CLSTN2 (ENSAMEG00000015696) #24 TRIM42 (ENSAMEG00000016501) SLC25A36 (ENSAMEG00000016498) #22 SPSB4 (ENSAMEG00000016489) #23 PXYLP1 (ENSAMEG00000016481) ZBTB38 (ENSAMEG00000019668) RASA2 (ENSAMEG00000016471) RNF7 (ENSAMEG00000029757) GRK7 (ENSAMEG00000012428) ENSAMEG00000028514 ATP1B3 (ENSAMEG00000012443) TFDP2 (ENSAMEG00000012466) GK5 (ENSAMEG00000012501) XRN1 (ENSAMEG00000012538) ATR (ENSAMEG00000012578) PLS1 (ENSAMEG00000012619) TRPC1 (ENSAMEG00000012683) PCOLCE2 (ENSAMEG00000012725) Felidae ANCESTRAL SPECIES 9 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Panthera ANCESTRAL SPECIES 12 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT01020000230346.C.g.a ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Panthera_a ANCESTRAL SPECIES 17 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.`b.a ENSGT00390000007772.ab ENSGT00390000007772.`b.b ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT01020000230346.C.g.a ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT00940000156502.e.b ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 lion MODERN SPECIES 9 ESYT3 (ENSPLOG00000012831) CEP70 (ENSPLOG00000013152) FAIM (ENSPLOG00000013468) PIK3CB (ENSPLOG00000013554) FOXL2 (ENSPLOG00000013618) ENSPLOG00000013639 ENSPLOG00000013653 ENSPLOG00000013664 MRPS22 (ENSPLOG00000013676) COPB2 (ENSPLOG00000013716) RBP2 (ENSPLOG00000013963) RBP1 (ENSPLOG00000014001) NMNAT3 (ENSPLOG00000014115) CLSTN2 (ENSPLOG00000014213) #24 TRIM42 (ENSPLOG00000014367) SLC25A36 (ENSPLOG00000014443) #22 SPSB4 (ENSPLOG00000014502) #23 PXYLP1 (ENSPLOG00000014550) ZBTB38 (ENSPLOG00000014693) RASA2 (ENSPLOG00000014718) RNF7 (ENSPLOG00000014770) GRK7 (ENSPLOG00000014829) ATP1B3 (ENSPLOG00000014889) TFDP2 (ENSPLOG00000014941) ENSPLOG00000015088 ENSPLOG00000015121 GK5 (ENSPLOG00000015158) XRN1 (ENSPLOG00000015299) ATR (ENSPLOG00000015412) PLS1 (ENSPLOG00000015495) TRPC1 (ENSPLOG00000015566) leopard MODERN SPECIES 5 FAIM (ENSPPRG00000002499) PIK3CB (ENSPPRG00000001380) ENSPPRG00000022943 FOXL2 (ENSPPRG00000023122) ENSPPRG00000015543 ENSPPRG00000015532 ENSPPRG00000015526 MRPS22 (ENSPPRG00000023721) COPB2 (ENSPPRG00000024757) RBP2 (ENSPPRG00000024816) RBP1 (ENSPPRG00000022489) NMNAT3 (ENSPPRG00000020994) CLSTN2 (ENSPPRG00000017546) #24 TRIM42 (ENSPPRG00000016034) ENSPPRG00000015570 SLC25A36 (ENSPPRG00000015256) #22 SPSB4 (ENSPPRG00000014139) #23 PXYLP1 (ENSPPRG00000013368) ZBTB38 (ENSPPRG00000015363) RASA2 (ENSPPRG00000012757) RNF7 (ENSPPRG00000010875) GRK7 (ENSPPRG00000010184) ATP1B3 (ENSPPRG00000009308) TFDP2 (ENSPPRG00000008909) ENSPPRG00000015257 GK5 (ENSPPRG00000007419) XRN1 (ENSPPRG00000007125) ATR (ENSPPRG00000003180) PLS1 (ENSPPRG00000002354) TRPC1 (ENSPPRG00000000533) PCOLCE2 (ENSPPRG00000000105) Tiger MODERN SPECIES 242 RBP2 (ENSPTIG00000019472) RBP1 (ENSPTIG00000018689) ENSPTIG00000018457 CLSTN2 (ENSPTIG00000017838) #24 TRIM42 (ENSPTIG00000017506) ENSPTIG00000017087 SLC25A36 (ENSPTIG00000015621) #22 SPSB4 (ENSPTIG00000015447) #23 PXYLP1 (ENSPTIG00000013939) ZBTB38 (ENSPTIG00000005500) RASA2 (ENSPTIG00000010804) RNF7 (ENSPTIG00000010047) GRK7 (ENSPTIG00000009733) ENSPTIG00000009651 ENSPTIG00000005462 TFDP2 (ENSPTIG00000006460) GK5 (ENSPTIG00000005036) XRN1 (ENSPTIG00000021081) ATR (ENSPTIG00000018572) PLS1 (ENSPTIG00000014589) TRPC1 (ENSPTIG00000009946) PCOLCE2 (ENSPTIG00000009436) Cat MODERN SPECIES 240 MRAS (ENSFCAG00000026623) ESYT3 (ENSFCAG00000013002) CEP70 (ENSFCAG00000013006) FAIM (ENSFCAG00000044712) PIK3CB (ENSFCAG00000002828) FOXL2 (ENSFCAG00000045890) ENSFCAG00000044931 ENSFCAG00000041019 MRPS22 (ENSFCAG00000001464) COPB2 (ENSFCAG00000001465) RBP2 (ENSFCAG00000001467) RBP1 (ENSFCAG00000034212) NMNAT3 (ENSFCAG00000046056) CLSTN2 (ENSFCAG00000002429) #24 TRIM42 (ENSFCAG00000001651) SLC25A36 (ENSFCAG00000035204) #22 SPSB4 (ENSFCAG00000025256) #23 PXYLP1 (ENSFCAG00000022336) ZBTB38 (ENSFCAG00000030922) RASA2 (ENSFCAG00000002561) RNF7 (ENSFCAG00000037838) GRK7 (ENSFCAG00000010128) ATP1B3 (ENSFCAG00000030431) ENSFCAG00000028193 ENSFCAG00000048032 TFDP2 (ENSFCAG00000003086) GK5 (ENSFCAG00000003088) XRN1 (ENSFCAG00000027589) ATR (ENSFCAG00000018078) PLS1 (ENSFCAG00000030454) TRPC1 (ENSFCAG00000022271) Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Chiroptera ANCESTRAL SPECIES 19 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 Microchiroptera ANCESTRAL SPECIES 16 ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT00390000013132.y.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00440000033958 Microbat MODERN SPECIES 945 ARMC8 (ENSMLUG00000001644) NME9 (ENSMLUG00000001649) ESYT3 (ENSMLUG00000007937) CEP70 (ENSMLUG00000007973) FAIM (ENSMLUG00000002496) PIK3CB (ENSMLUG00000000124) ENSMLUG00000011579 MRPS22 (ENSMLUG00000015608) COPB2 (ENSMLUG00000015621) RBP2 (ENSMLUG00000004818) ENSMLUG00000004824 NMNAT3 (ENSMLUG00000005705) CLSTN2 (ENSMLUG00000005298) #24 TRIM42 (ENSMLUG00000008678) ENSMLUG00000025970 SLC25A36 (ENSMLUG00000001464) #22 SPSB4 (ENSMLUG00000001564) #23 PXYLP1 (ENSMLUG00000012502) ZBTB38 (ENSMLUG00000012512) RASA2 (ENSMLUG00000007834) TFDP2 (ENSMLUG00000014707) ENSMLUG00000007878 GRK7 (ENSMLUG00000030484) ATP1B3 (ENSMLUG00000011339) ENSMLUG00000010633 TMEM43 (ENSMLUG00000010638) XPC (ENSMLUG00000010655) LSM3 (ENSMLUG00000010677) SLC6A6 (ENSMLUG00000003862) GRIP2 (ENSMLUG00000003868) CCDC174 (ENSMLUG00000010390) Greater horseshoe bat MODERN SPECIES 8 CEP70 (ENSRFEG00010012184) FAIM (ENSRFEG00010012708) PIK3CB (ENSRFEG00010012826) ENSRFEG00010012943 ENSRFEG00010012951 ENSRFEG00010012973 ENSRFEG00010012997 MRPS22 (ENSRFEG00010013009) COPB2 (ENSRFEG00010013082) RBP2 (ENSRFEG00010013165) RBP1 (ENSRFEG00010013215) NMNAT3 (ENSRFEG00010013358) ENSRFEG00010013420 CLSTN2 (ENSRFEG00010013540) #24 TRIM42 (ENSRFEG00010013822) SLC25A36 (ENSRFEG00010013926) #22 SPSB4 (ENSRFEG00010014088) #23 PXYLP1 (ENSRFEG00010014126) ZBTB38 (ENSRFEG00010014220) RASA2 (ENSRFEG00010014242) ENSRFEG00010014323 RNF7 (ENSRFEG00010014386) ATP1B3 (ENSRFEG00010014478) ENSRFEG00010014549 CHCHD4 (ENSRFEG00010015265) TMEM43 (ENSRFEG00010015322) XPC (ENSRFEG00010015501) LSM3 (ENSRFEG00010015559) SLC6A6 (ENSRFEG00010015647) GRIP2 (ENSRFEG00010015722) ENSRFEG00010016101 Megabat MODERN SPECIES 7826 SLC25A36 (ENSPVAG00000007958) #22 Equus ANCESTRAL SPECIES 5 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00940000168009 ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Donkey MODERN SPECIES 13 CEP70 (ENSEASG00005003768) ENSEASG00005003767 FAIM (ENSEASG00005003765) ENSEASG00005003759 PIK3CB (ENSEASG00005003757) FOXL2 (ENSEASG00005035226) ENSEASG00005035070 ENSEASG00005034865 MRPS22 (ENSEASG00005003738) COPB2 (ENSEASG00005003731) RBP2 (ENSEASG00005037574) NMNAT3 (ENSEASG00005023895) ENSEASG00005003712 CLSTN2 (ENSEASG00005003683) #24 TRIM42 (ENSEASG00005003676) SLC25A36 (ENSEASG00005003673) #22 SPSB4 (ENSEASG00005003671) #23 PXYLP1 (ENSEASG00005024376) ZBTB38 (ENSEASG00005038051) RASA2 (ENSEASG00005003659) ENSEASG00005027864 GRK7 (ENSEASG00005003655) ATP1B3 (ENSEASG00005003651) ENSEASG00005003649 TFDP2 (ENSEASG00005003645) GK5 (ENSEASG00005003607) XRN1 (ENSEASG00005002687) ATR (ENSEASG00005002097) PLS1 (ENSEASG00005000633) TRPC1 (ENSEASG00005000262) PCOLCE2 (ENSEASG00005000245) Horse MODERN SPECIES 7 MRAS (ENSECAG00000018736) ESYT3 (ENSECAG00000019060) CEP70 (ENSECAG00000022064) FAIM (ENSECAG00000023744) PIK3CB (ENSECAG00000023941) FOXL2 (ENSECAG00000034891) ENSECAG00000047572 MRPS22 (ENSECAG00000013272) COPB2 (ENSECAG00000015099) ENSECAG00000034060 RBP2 (ENSECAG00000020170) NMNAT3 (ENSECAG00000021932) ENSECAG00000001591 CLSTN2 (ENSECAG00000022054) #24 TRIM42 (ENSECAG00000008921) SLC25A36 (ENSECAG00000010094) #22 SPSB4 (ENSECAG00000010241) #23 PXYLP1 (ENSECAG00000010807) ZBTB38 (ENSECAG00000010836) RASA2 (ENSECAG00000010845) RNF7 (ENSECAG00000026883) GRK7 (ENSECAG00000018719) ATP1B3 (ENSECAG00000019885) TFDP2 (ENSECAG00000021725) GK5 (ENSECAG00000045044) ENSECAG00000055509 XRN1 (ENSECAG00000056093) ATR (ENSECAG00000013285) PLS1 (ENSECAG00000014408) TRPC1 (ENSECAG00000018048) PCOLCE2 (ENSECAG00000020485) Artiodactyla ANCESTRAL SPECIES 2 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.db ENSGT00390000007772.eb ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00910000147942 ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Suina ANCESTRAL SPECIES 1 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.db.a ENSGT00390000007772.eb ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Pig MODERN SPECIES 4 ENSSSCG00000055839 ENSSSCG00000059936 ENSSSCG00000060407 ENSSSCG00000053353 ENSSSCG00000046938 ENSSSCG00000056463 ENSSSCG00000057835 ENSSSCG00000049490 MRPS22 (ENSSSCG00000035771) COPB2 (ENSSSCG00000011662) RBP2 (ENSSSCG00000011663) RBP1 (ENSSSCG00000011664) NMNAT3 (ENSSSCG00000031142) CLSTN2 (ENSSSCG00000011666) #24 TRIM42 (ENSSSCG00000011668) SLC25A36 (ENSSSCG00000036855) #22 SPSB4 (ENSSSCG00000034369) #23 PXYLP1 (ENSSSCG00000011670) ZBTB38 (ENSSSCG00000022073) RASA2 (ENSSSCG00000011672) ENSSSCG00000041863 RNF7 (ENSSSCG00000029774) GRK7 (ENSSSCG00000011675) ENSSSCG00000011676 TFDP2 (ENSSSCG00000037647) ENSSSCG00000036302 ENSSSCG00000058234 ENSSSCG00000048998 ENSSSCG00000034370 ENSSSCG00000046587 GK5 (ENSSSCG00000011677) Chacoan peccary MODERN SPECIES 943 CEP70 (ENSCWAG00000012773) FAIM (ENSCWAG00000013000) PIK3CB (ENSCWAG00000013095) FOXL2 (ENSCWAG00000013310) ENSCWAG00000013326 ENSCWAG00000013334 MRPS22 (ENSCWAG00000013353) COPB2 (ENSCWAG00000013414) RBP2 (ENSCWAG00000013512) ENSCWAG00000013587 RBP1 (ENSCWAG00000013607) NMNAT3 (ENSCWAG00000013679) CLSTN2 (ENSCWAG00000013840) #24 TRIM42 (ENSCWAG00000013961) SLC25A36 (ENSCWAG00000014021) #22 SPSB4 (ENSCWAG00000011320) #23 PXYLP1 (ENSCWAG00000011368) ZBTB38 (ENSCWAG00000011564) RASA2 (ENSCWAG00000011597) Artiodactyla_a ANCESTRAL SPECIES 8 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.db ENSGT00390000007772.eb ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Camelidae ANCESTRAL SPECIES ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00390000007772.db ENSGT00390000007772.eb ENSGT00390000006095 ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Arabian camel MODERN SPECIES MRAS (ENSCDRG00005007126) ESYT3 (ENSCDRG00005007177) CEP70 (ENSCDRG00005007301) FAIM (ENSCDRG00005007514) PIK3CB (ENSCDRG00005007566) ENSCDRG00005007675 ENSCDRG00005007870 ENSCDRG00005007910 MRPS22 (ENSCDRG00005007928) ENSCDRG00005007972 RBP2 (ENSCDRG00005008064) RBP1 (ENSCDRG00005008110) NMNAT3 (ENSCDRG00005008148) CLSTN2 (ENSCDRG00005008241) #24 TRIM42 (ENSCDRG00005008390) SLC25A36 (ENSCDRG00005008462) #22 SPSB4 (ENSCDRG00005008558) #23 PXYLP1 (ENSCDRG00005008608) ZBTB38 (ENSCDRG00005008946) RASA2 (ENSCDRG00005008964) RNF7 (ENSCDRG00005009202) GRK7 (ENSCDRG00005009268) ATP1B3 (ENSCDRG00005009339) TFDP2 (ENSCDRG00005009411) GK5 (ENSCDRG00005009714) XRN1 (ENSCDRG00005009918) ATR (ENSCDRG00005010671) PLS1 (ENSCDRG00005010969) TRPC1 (ENSCDRG00005011182) PCOLCE2 (ENSCDRG00005011354) U2SURP (ENSCDRG00005012054) Alpaca MODERN SPECIES 1337 ENSVPAG00000008290 #24 TRIM42 (ENSVPAG00000008291) SLC25A36 (ENSVPAG00000008292) #22 Artiodactyla_b ANCESTRAL SPECIES 6 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.db.c ENSGT00390000007772.db.d ENSGT00390000007772.eb ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00990000212240 ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Pecora ANCESTRAL SPECIES 8 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.db.c.c ENSGT00390000007772.db.d ENSGT00390000007772.eb ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b.eb ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00990000212240 ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f Percora_a DUPLICATION Percora_a ANCESTRAL SPECIES 7 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.db.c.c ENSGT00390000007772.db.d ENSGT00390000007772.eb ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d.a #22 ENSGT01030000234629.C #23 ENSGT00910000144184.r ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b.eb ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00990000212240 ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b Bovidae ANCESTRAL SPECIES 9 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.db.c.c ENSGT00390000007772.db.d ENSGT00390000007772.eb ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d.a #22 ENSGT01030000234629.C #23 ENSGT00910000144184.r ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b.eb ENSGT00910000147942.a ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f Bovinae ANCESTRAL SPECIES 6 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.db.c.c ENSGT00390000007772.db.c.d ENSGT00390000007772.db.d.g ENSGT00390000007772.db.d.h ENSGT00390000007772.eb ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d.a #22 ENSGT01030000234629.C #23 ENSGT00910000144184.r ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000171658.a ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b.eb ENSGT00910000147942.a ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b Bos ANCESTRAL SPECIES 7 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.db.c.c ENSGT00390000007772.db.c.d ENSGT00390000007772.db.d.g ENSGT00390000007772.db.d.h ENSGT00390000007772.eb ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d.a #22 ENSGT01030000234629.C #23 ENSGT00910000144184.r ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000171658.a ENSGT00940000155481 ENSGT00940000160511 ENSGT00910000147942.a ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f Bos_b ANCESTRAL SPECIES 5 ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.a.b.b.a.a.a.a.b ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.db.c.c ENSGT00390000007772.db.d.g ENSGT00390000007772.db.d.h ENSGT00390000007772.eb ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d.a #22 ENSGT01030000234629.C #23 ENSGT00910000144184.r ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b.eb ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f Hybrid Bos Indicus MODERN SPECIES ENSBIXG00005029024 FAIM (ENSBIXG00005002037) PIK3CB (ENSBIXG00005001996) FOXL2 (ENSBIXG00005029068) ENSBIXG00005029071 ENSBIXG00005001969 ENSBIXG00005029080 ENSBIXG00005005148 ENSBIXG00005029095 MRPS22 (ENSBIXG00005005189) COPB2 (ENSBIXG00005001816) RBP2 (ENSBIXG00005001783) ENSBIXG00005029214 CLSTN2 (ENSBIXG00005029240) #24 TRIM42 (ENSBIXG00005001565) SLC25A36 (ENSBIXG00005001539) #22 SPSB4 (ENSBIXG00005001522) #23 ENSBIXG00005005286 PXYLP1 (ENSBIXG00005029247) ZBTB38 (ENSBIXG00005005290) RASA2 (ENSBIXG00005005293) RNF7 (ENSBIXG00005005297) GRK7 (ENSBIXG00005029666) ATP1B3 (ENSBIXG00005029659) ENSBIXG00005029647 ENSBIXG00005029643 TFDP2 (ENSBIXG00005029603) GK5 (ENSBIXG00005029572) ENSBIXG00005029562 XRN1 (ENSBIXG00005029509) ATR (ENSBIXG00005029438) Cow MODERN SPECIES PIK3CB (ENSBTAG00000006909) FOXL2 (ENSBTAG00000031277) ENSBTAG00000045637 ENSBTAG00000048724 ENSBTAG00000051220 ENSBTAG00000046738 ENSBTAG00000046040 MRPS22 (ENSBTAG00000047608) COPB2 (ENSBTAG00000014843) RBP2 (ENSBTAG00000015056) RBP1 (ENSBTAG00000020028) NMNAT3 (ENSBTAG00000051936) CLSTN2 (ENSBTAG00000008714) #24 TRIM42 (ENSBTAG00000018346) ENSBTAG00000052041 SLC25A36 (ENSBTAG00000015310) #22 SPSB4 (ENSBTAG00000009115) #23 ENSBTAG00000050470 PXYLP1 (ENSBTAG00000050763) ZBTB38 (ENSBTAG00000040061) RASA2 (ENSBTAG00000015413) RNF7 (ENSBTAG00000002185) GRK7 (ENSBTAG00000021886) ATP1B3 (ENSBTAG00000014140) ENSBTAG00000019007 TFDP2 (ENSBTAG00000006222) GK5 (ENSBTAG00000018138) XRN1 (ENSBTAG00000011524) ATR (ENSBTAG00000011529) PLS1 (ENSBTAG00000023429) TRPC1 (ENSBTAG00000002232) Bos_a ANCESTRAL SPECIES ENSGT00940000154369.d.a #22 Wild yak MODERN SPECIES 1920 ENSBMUG00000002251 #22 American bison MODERN SPECIES 3298 FAIM (ENSBBBG00000003997) PIK3CB (ENSBBBG00000016142) FOXL2 (ENSBBBG00000016154) ENSBBBG00000016159 ENSBBBG00000016164 ENSBBBG00000004011 ENSBBBG00000016174 ENSBBBG00000016176 MRPS22 (ENSBBBG00000016196) COPB2 (ENSBBBG00000016249) RBP2 (ENSBBBG00000016260) ENSBBBG00000016274 NMNAT3 (ENSBBBG00000016315) CLSTN2 (ENSBBBG00000016341) #24 TRIM42 (ENSBBBG00000016347) ENSBBBG00000016376 #22 SPSB4 (ENSBBBG00000008334) #23 ENSBBBG00000004054 PXYLP1 (ENSBBBG00000016417) ZBTB38 (ENSBBBG00000016426) RASA2 (ENSBBBG00000016517) ENSBBBG00000016540 RNF7 (ENSBBBG00000004080) GRK7 (ENSBBBG00000016561) ATP1B3 (ENSBBBG00000016573) ENSBBBG00000016579 ENSBBBG00000004088 TFDP2 (ENSBBBG00000016664) GK5 (ENSBBBG00000016698) XRN1 (ENSBBBG00000009064) ATR (ENSBBBG00000008122) Caprinae ANCESTRAL SPECIES 8 ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00390000007772.eb ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d.a #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b.eb.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Goat MODERN SPECIES NME9 (ENSCHIG00000014298) MRAS (ENSCHIG00000025837) ESYT3 (ENSCHIG00000015996) CEP70 (ENSCHIG00000002428) FAIM (ENSCHIG00000017833) ENSCHIG00000016904 PIK3CB (ENSCHIG00000019728) ENSCHIG00000015101 MRPS22 (ENSCHIG00000027042) COPB2 (ENSCHIG00000022228) RBP2 (ENSCHIG00000027152) RBP1 (ENSCHIG00000020909) NMNAT3 (ENSCHIG00000026289) CLSTN2 (ENSCHIG00000022240) #24 TRIM42 (ENSCHIG00000015242) ENSCHIG00000022243 #22 SPSB4 (ENSCHIG00000008629) #23 ENSCHIG00000020425 PXYLP1 (ENSCHIG00000025350) ZBTB38 (ENSCHIG00000010094) RASA2 (ENSCHIG00000002573) RNF7 (ENSCHIG00000013336) GRK7 (ENSCHIG00000012094) ENSCHIG00000027094 ENSCHIG00000017443 TFDP2 (ENSCHIG00000009621) GK5 (ENSCHIG00000017817) XRN1 (ENSCHIG00000019192) ATR (ENSCHIG00000021916) PLS1 (ENSCHIG00000007676) TRPC1 (ENSCHIG00000020690) Rambouillet Sheep MODERN SPECIES FAIM (ENSOARG00020011065) PIK3CB (ENSOARG00020010835) ENSOARG00020010746 FOXL2 (ENSOARG00020010684) ENSOARG00020010654 ENSOARG00020010633 ENSOARG00020010569 MRPS22 (ENSOARG00020010500) COPB2 (ENSOARG00020010262) RBP2 (ENSOARG00020010203) RBP1 (ENSOARG00020010135) NMNAT3 (ENSOARG00020009718) CLSTN2 (ENSOARG00020009535) #24 TRIM42 (ENSOARG00020009485) ENSOARG00020009460 SLC25A36 (ENSOARG00020009173) #22 SPSB4 (ENSOARG00020009123) #23 PXYLP1 (ENSOARG00020008991) ZBTB38 (ENSOARG00020008974) RASA2 (ENSOARG00020008530) RNF7 (ENSOARG00020008414) GRK7 (ENSOARG00020008372) ATP1B3 (ENSOARG00020008329) ENSOARG00020008278 ENSOARG00020008237 TFDP2 (ENSOARG00020007870) ENSOARG00020007831 GK5 (ENSOARG00020007690) XRN1 (ENSOARG00020007309) ATR (ENSOARG00020006427) ENSOARG00020006395 Siberian musk deer MODERN SPECIES 1183 ESYT3 (ENSMMSG00000008214) ENSMMSG00000007946 FAIM (ENSMMSG00000007872) PIK3CB (ENSMMSG00000007788) ENSMMSG00000007747 ENSMMSG00000007696 ENSMMSG00000007679 ENSMMSG00000007660 MRPS22 (ENSMMSG00000007623) COPB2 (ENSMMSG00000007584) RBP2 (ENSMMSG00000007546) RBP1 (ENSMMSG00000007523) NMNAT3 (ENSMMSG00000007475) CLSTN2 (ENSMMSG00000007374) #24 TRIM42 (ENSMMSG00000007340) SLC25A36 (ENSMMSG00000007138) #22 SPSB4 (ENSMMSG00000007102) #23 ENSMMSG00000007071 PXYLP1 (ENSMMSG00000006978) RASA2 (ENSMMSG00000006905) RNF7 (ENSMMSG00000006837) GRK7 (ENSMMSG00000006798) ENSMMSG00000006771 ENSMMSG00000006756 ENSMMSG00000006733 TFDP2 (ENSMMSG00000006589) GK5 (ENSMMSG00000006474) XRN1 (ENSMMSG00000006235) ATR (ENSMMSG00000006162) PLS1 (ENSMMSG00000006112) TRPC1 (ENSMMSG00000006046) Percora_a ANCESTRAL SPECIES ENSGT00940000154369.d.b #22 Bovidae ANCESTRAL SPECIES ENSGT00940000154369.d.b #22 Bovinae ANCESTRAL SPECIES ENSGT00940000154369.d.b #22 Bos ANCESTRAL SPECIES ENSGT00940000154369.d.b #22 Bos_a ANCESTRAL SPECIES ENSGT00940000154369.d.b #22 Wild yak MODERN SPECIES 1097 ENSBMUG00000004712 #22 American bison MODERN SPECIES 3184 ENSBBBG00000004275 #22 ENSBBBG00000017270 ENSBBBG00000017291 ADGRB3 (ENSBBBG00000017379) LMBRD1 (ENSBBBG00000017604) COL19A1 (ENSBBBG00000017675) COL9A1 (ENSBBBG00000017784) ENSBBBG00000004384 FAM135A (ENSBBBG00000008563) SDHAF4 (ENSBBBG00000018050) SMAP1 (ENSBBBG00000018079) B3GAT2 (ENSBBBG00000018087) Caprinae ANCESTRAL SPECIES ENSGT00940000154369.d.b #22 Goat MODERN SPECIES 5 ARHGAP39 (ENSCHIG00000006436) COMMD5 (ENSCHIG00000011280) ZNF7 (ENSCHIG00000008847) RPL8 (ENSCHIG00000025056) ZNF34 (ENSCHIG00000017722) C8orf33 (ENSCHIG00000002449) ZNF16 (ENSCHIG00000020215) ZNF250 (ENSCHIG00000022921) ENSCHIG00000008396 ENSCHIG00000017744 PHF3 (ENSCHIG00000014650) ENSCHIG00000016048 ENSCHIG00000014408 ENSCHIG00000024399 ENSCHIG00000021052 ENSCHIG00000010208 #22 ADGRB3 (ENSCHIG00000014726) LMBRD1 (ENSCHIG00000008693) ENSCHIG00000016312 FAM135A (ENSCHIG00000013509) ENSCHIG00000008368 SDHAF4 (ENSCHIG00000006266) SMAP1 (ENSCHIG00000015060) B3GAT2 (ENSCHIG00000018487) OGFRL1 (ENSCHIG00000021433) RIMS1 (ENSCHIG00000011011) ENSCHIG00000010809 KCNQ5 (ENSCHIG00000018348) ENSCHIG00000021014 OOEP (ENSCHIG00000024113) ENSCHIG00000017351 Yarkand deer MODERN SPECIES 10 ENSCHYG00000013546 ENSCHYG00000013518 ENSCHYG00000025718 ENSCHYG00000025710 ENSCHYG00000025695 ENSCHYG00000025687 ENSCHYG00000025659 MRPS22 (ENSCHYG00000025593) COPB2 (ENSCHYG00000025389) RBP2 (ENSCHYG00000025312) RBP1 (ENSCHYG00000025267) ENSCHYG00000025250 CLSTN2 (ENSCHYG00000025188) #24 TRIM42 (ENSCHYG00000025165) ENSCHYG00000025156 SLC25A36 (ENSCHYG00000025011) #22 SPSB4 (ENSCHYG00000024998) #23 PXYLP1 (ENSCHYG00000024922) ZBTB38 (ENSCHYG00000024909) RASA2 (ENSCHYG00000024595) RNF7 (ENSCHYG00000024540) GRK7 (ENSCHYG00000024502) ENSCHYG00000024452 ENSCHYG00000024429 ENSCHYG00000024409 TFDP2 (ENSCHYG00000024201) GK5 (ENSCHYG00000024077) XRN1 (ENSCHYG00000023362) ATR (ENSCHYG00000022692) PLS1 (ENSCHYG00000022526) TRPC1 (ENSCHYG00000022264) Cetacea ANCESTRAL SPECIES 10 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.eb ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00990000212240 ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Odontoceti ANCESTRAL SPECIES 9 ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00990000212240 ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Sperm whale DUPLICATION Sperm whale MODERN SPECIES PIK3CB (ENSPCTG00005000147) NMNAT3 (ENSPCTG00005000146) RBP1 (ENSPCTG00005000145) RBP2 (ENSPCTG00005000144) COPB2 (ENSPCTG00005000143) MRPS22 (ENSPCTG00005000142) ENSPCTG00005000141 ENSPCTG00005000140 ENSPCTG00005000138 ENSPCTG00005000137 ENSPCTG00005000136 ENSPCTG00005000135 FOXL2 (ENSPCTG00005000133) CLSTN2 (ENSPCTG00005000131) #24 TRIM42 (ENSPCTG00005000130) SLC25A36 (ENSPCTG00005000128) #22 SPSB4 (ENSPCTG00005000126) #23 PXYLP1 (ENSPCTG00005000125) ZBTB38 (ENSPCTG00005000124) RASA2 (ENSPCTG00005000123) RNF7 (ENSPCTG00005000121) GRK7 (ENSPCTG00005000120) ATP1B3 (ENSPCTG00005000118) ENSPCTG00005000117 TFDP2 (ENSPCTG00005000116) GK5 (ENSPCTG00005000115) XRN1 (ENSPCTG00005000114) ATR (ENSPCTG00005000113) PLS1 (ENSPCTG00005000112) TRPC1 (ENSPCTG00005000111) PCOLCE2 (ENSPCTG00005000110) Sperm whale MODERN SPECIES 2 ENSPCTG00005000527 UCN3 (ENSPCTG00005000494) TUBAL3 (ENSPCTG00005000483) NET1 (ENSPCTG00005005113) CALML5 (ENSPCTG00005005095) CALML3 (ENSPCTG00005005081) ASB13 (ENSPCTG00005005043) TASOR2 (ENSPCTG00005004785) GDI2 (ENSPCTG00005004676) ANKRD16 (ENSPCTG00005004609) FBH1 (ENSPCTG00005004495) RBM17 (ENSPCTG00005004471) ENSPCTG00005004454 PFKFB3 (ENSPCTG00005004371) PRKCQ (ENSPCTG00005004106) ENSPCTG00005004068 #22 SFMBT2 (ENSPCTG00005004060) ITIH5 (ENSPCTG00005004041) ITIH2 (ENSPCTG00005003986) KIN (ENSPCTG00005003946) ATP5F1C (ENSPCTG00005003924) TAF3 (ENSPCTG00005003910) GATA3 (ENSPCTG00005003895) CELF2 (ENSPCTG00005003796) USP6NL (ENSPCTG00005003752) PROSER2 (ENSPCTG00005003747) UPF2 (ENSPCTG00005003703) DHTKD1 (ENSPCTG00005003657) SEC61A2 (ENSPCTG00005003601) NUDT5 (ENSPCTG00005003572) CDC123 (ENSPCTG00005003548) Odontoceti_a ANCESTRAL SPECIES 8 ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00990000212240 ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714.f ENSGT00940000155714.e ENSGT00950000183097.a.b ENSGT01060000248594.f Odontoceti_b ANCESTRAL SPECIES 9 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00950000182878.b.a.c.a.a.b.o.a.a.b.a ENSGT00940000162075 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00940000154937.m ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00510000049510.j ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714.f ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Vaquita MODERN SPECIES 15 PIK3CB (ENSPSNG00000015153) ENSPSNG00000015240 FOXL2 (ENSPSNG00000015301) ENSPSNG00000015338 ENSPSNG00000015359 ENSPSNG00000015372 ENSPSNG00000015393 MRPS22 (ENSPSNG00000015570) COPB2 (ENSPSNG00000015632) RBP2 (ENSPSNG00000015711) RBP1 (ENSPSNG00000015785) ENSPSNG00000015860 ENSPSNG00000006348 CLSTN2 (ENSPSNG00000006409) #24 TRIM42 (ENSPSNG00000006478) SLC25A36 (ENSPSNG00000006521) #22 SPSB4 (ENSPSNG00000006561) #23 ZBTB38 (ENSPSNG00000006604) RASA2 (ENSPSNG00000007185) RNF7 (ENSPSNG00000008117) GRK7 (ENSPSNG00000008164) ATP1B3 (ENSPSNG00000008203) ENSPSNG00000008244 TFDP2 (ENSPSNG00000008314) ENSPSNG00000008603 ENSPSNG00000008620 GK5 (ENSPSNG00000008649) XRN1 (ENSPSNG00000008771) ATR (ENSPSNG00000008915) PLS1 (ENSPSNG00000008996) TRPC1 (ENSPSNG00000009055) Monodontidae ANCESTRAL SPECIES 23 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00950000182878.b.a.c.a.a.b.o.a.a.b.a ENSGT00940000162075 ENSGT00390000007772.db.c.b ENSGT00390000007772.db.c.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00940000154937.m ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00510000049510.j ENSGT00990000212240 ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714.f ENSGT00950000183097.a.b ENSGT01060000248594.f Beluga whale MODERN SPECIES 18 PIK3CB (ENSDLEG00000000922) ENSDLEG00000000978 FOXL2 (ENSDLEG00000000988) ENSDLEG00000001003 ENSDLEG00000001013 ENSDLEG00000001020 ENSDLEG00000001031 MRPS22 (ENSDLEG00000001044) COPB2 (ENSDLEG00000001067) RBP2 (ENSDLEG00000001101) RBP1 (ENSDLEG00000001122) NMNAT3 (ENSDLEG00000001136) ENSDLEG00000001151 CLSTN2 (ENSDLEG00000001185) #24 TRIM42 (ENSDLEG00000001364) SLC25A36 (ENSDLEG00000001393) #22 SPSB4 (ENSDLEG00000001437) #23 PXYLP1 (ENSDLEG00000001445) ZBTB38 (ENSDLEG00000001456) RASA2 (ENSDLEG00000001473) ENSDLEG00000001540 RNF7 (ENSDLEG00000001551) GRK7 (ENSDLEG00000001565) ATP1B3 (ENSDLEG00000001587) ENSDLEG00000001620 TFDP2 (ENSDLEG00000001700) ENSDLEG00000002016 GK5 (ENSDLEG00000002054) XRN1 (ENSDLEG00000002314) ATR (ENSDLEG00000002842) ENSDLEG00000002868 Narwhal DUPLICATION Narwhal DUPLICATION Narwhal MODERN SPECIES 297 CEP70 (ENSMMNG00015002438) FAIM (ENSMMNG00015002383) PIK3CB (ENSMMNG00015002338) FOXL2 (ENSMMNG00015002300) ENSMMNG00015002276 ENSMMNG00015002267 ENSMMNG00015002255 MRPS22 (ENSMMNG00015002233) COPB2 (ENSMMNG00015002153) RBP2 (ENSMMNG00015002106) RBP1 (ENSMMNG00015002084) NMNAT3 (ENSMMNG00015002017) ENSMMNG00015001951 CLSTN2 (ENSMMNG00015001908) #24 TRIM42 (ENSMMNG00015001882) ENSMMNG00015001759 #22 SPSB4 (ENSMMNG00015001726) #23 PXYLP1 (ENSMMNG00015001696) ZBTB38 (ENSMMNG00015001678) RASA2 (ENSMMNG00015001646) RNF7 (ENSMMNG00015001619) GRK7 (ENSMMNG00015001595) ENSMMNG00015001573 ATP1B3 (ENSMMNG00015001546) ENSMMNG00015001532 TFDP2 (ENSMMNG00015001329) GK5 (ENSMMNG00015001246) XRN1 (ENSMMNG00015001039) ATR (ENSMMNG00015000820) PLS1 (ENSMMNG00015000766) TRPC1 (ENSMMNG00015000693) Narwhal MODERN SPECIES 312 ELAVL2 (ENSMMNG00015020789) IZUMO3 (ENSMMNG00015020736) ENSMMNG00015020712 TUSC1 (ENSMMNG00015020705) CAAP1 (ENSMMNG00015020689) PLAA (ENSMMNG00015020666) LRRC19 (ENSMMNG00015020655) IFT74 (ENSMMNG00015020629) TEK (ENSMMNG00015020478) EQTN (ENSMMNG00015020384) IFNK (ENSMMNG00015020369) MOB3B (ENSMMNG00015020353) C9orf72 (ENSMMNG00015020313) LINGO2 (ENSMMNG00015020298) ENSMMNG00015020280 ENSMMNG00015020250 #22 ACO1 (ENSMMNG00015020219) TOPORS (ENSMMNG00015020111) SMIM27 (ENSMMNG00015020089) ENSMMNG00015020067 ENSMMNG00015020043 TMEM215 (ENSMMNG00015020032) APTX (ENSMMNG00015019891) ENSMMNG00015019827 SMU1 (ENSMMNG00015019783) B4GALT1 (ENSMMNG00015019757) ENSMMNG00015019735 BAG1 (ENSMMNG00015019712) CHMP5 (ENSMMNG00015019686) NFX1 (ENSMMNG00015019641) ENSMMNG00015019525 Narwhal MODERN SPECIES 308 ENSMMNG00015017940 UCN3 (ENSMMNG00015017920) TUBAL3 (ENSMMNG00015017890) NET1 (ENSMMNG00015017849) CALML5 (ENSMMNG00015017830) CALML3 (ENSMMNG00015017819) ASB13 (ENSMMNG00015017787) ENSMMNG00015017743 ANKRD16 (ENSMMNG00015017710) FBH1 (ENSMMNG00015017638) IL15RA (ENSMMNG00015017551) IL2RA (ENSMMNG00015017505) RBM17 (ENSMMNG00015017475) PFKFB3 (ENSMMNG00015017388) PRKCQ (ENSMMNG00015017162) ENSMMNG00015017079 #22 SFMBT2 (ENSMMNG00015017052) ITIH5 (ENSMMNG00015016997) ITIH2 (ENSMMNG00015016956) KIN (ENSMMNG00015016917) ATP5F1C (ENSMMNG00015016884) TAF3 (ENSMMNG00015016836) GATA3 (ENSMMNG00015016810) CELF2 (ENSMMNG00015016638) USP6NL (ENSMMNG00015016486) ENSMMNG00015016430 PROSER2 (ENSMMNG00015016407) UPF2 (ENSMMNG00015016353) DHTKD1 (ENSMMNG00015016221) ENSMMNG00015015938 ENSMMNG00015015766 Dolphin DUPLICATION Dolphin MODERN SPECIES 3506 ENSTTRG00000003288 #22 SPSB4 (ENSTTRG00000003289) #23 PXYLP1 (ENSTTRG00000003290) Dolphin MODERN SPECIES 5739 ENSTTRG00000004756 #22 Blue whale DUPLICATION Blue whale MODERN SPECIES 15 FOXL2 (ENSBMSG00010002293) ENSBMSG00010002310 ENSBMSG00010002319 ENSBMSG00010002332 ENSBMSG00010002354 ENSBMSG00010002363 ENSBMSG00010002375 MRPS22 (ENSBMSG00010002393) COPB2 (ENSBMSG00010002410) ENSBMSG00010002432 RBP2 (ENSBMSG00010002440) RBP1 (ENSBMSG00010002450) NMNAT3 (ENSBMSG00010002472) CLSTN2 (ENSBMSG00010002499) #24 TRIM42 (ENSBMSG00010002516) SLC25A36 (ENSBMSG00010002537) #22 ENSBMSG00010002556 SPSB4 (ENSBMSG00010002565) #23 PXYLP1 (ENSBMSG00010002600) ZBTB38 (ENSBMSG00010002653) RASA2 (ENSBMSG00010002664) RNF7 (ENSBMSG00010002685) GRK7 (ENSBMSG00010002693) ENSBMSG00010002711 ENSBMSG00010002724 TFDP2 (ENSBMSG00010002750) GK5 (ENSBMSG00010002815) XRN1 (ENSBMSG00010002838) ATR (ENSBMSG00010002907) PLS1 (ENSBMSG00010002998) TRPC1 (ENSBMSG00010003018) Blue whale MODERN SPECIES 11 CALML5 (ENSBMSG00010006274) CALML3 (ENSBMSG00010006268) ASB13 (ENSBMSG00010006256) TASOR2 (ENSBMSG00010006201) ENSBMSG00010006160 ANKRD16 (ENSBMSG00010006137) FBH1 (ENSBMSG00010006104) IL15RA (ENSBMSG00010006072) IL2RA (ENSBMSG00010006033) ENSBMSG00010006019 RBM17 (ENSBMSG00010006011) PFKFB3 (ENSBMSG00010005913) ENSBMSG00010005873 PRKCQ (ENSBMSG00010005729) ENSBMSG00010005682 ENSBMSG00010005677 #22 SFMBT2 (ENSBMSG00010005646) ITIH5 (ENSBMSG00010005624) ITIH2 (ENSBMSG00010005568) ENSBMSG00010005543 ENSBMSG00010005532 TAF3 (ENSBMSG00010005518) GATA3 (ENSBMSG00010005511) CELF2 (ENSBMSG00010005435) USP6NL (ENSBMSG00010005348) ECHDC3 (ENSBMSG00010005323) PROSER2 (ENSBMSG00010005318) UPF2 (ENSBMSG00010005302) DHTKD1 (ENSBMSG00010005281) ENSBMSG00010005247 ENSBMSG00010005208 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000154369.d #22 Hedgehog MODERN SPECIES 1602 SLC25A36 (ENSEEUG00000004745) #22 Common shrew MODERN SPECIES 1088 SLC25A36 (ENSSARG00000005498) #22 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Primates ANCESTRAL SPECIES 1 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Haplorrhini ANCESTRAL SPECIES 5 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Simiiformes ANCESTRAL SPECIES 1 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00410000029590 ENSGT00390000007772.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Catarrhini ANCESTRAL SPECIES 2 ENSGT00940000157522 ENSGT00940000162075 ENSGT00410000029590 ENSGT00390000007772.a.c.b ENSGT00390000007772.a.c.a ENSGT00390000007772.a.d ENSGT00910000147180 ENSGT00910000147082 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.v ENSGT01090000260040.b.b.b.b.a.a.a.a ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00940000157522 ENSGT00940000162075 ENSGT00410000029590 ENSGT00390000007772.a.c.b ENSGT00390000007772.a.c.a ENSGT00390000007772.a.d ENSGT00910000147180 ENSGT00910000147082 ENSGT00390000006095.s ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT01090000260040.b.b.b.b.a.a.a.a ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT00510000046985.i ENSGT01000000214434.A ENSGT00940000156225.d ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00940000157522 ENSGT00940000162075 ENSGT00410000029590 ENSGT00390000007772.a.c.b ENSGT00390000007772.a.c.a ENSGT00390000007772.a.d ENSGT00910000147180 ENSGT00910000147082 ENSGT00390000006095.s ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT00510000046985.i ENSGT01000000214434.A ENSGT00940000156225.d ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f Vervet Monkey DUPLICATION Vervet Monkey MODERN SPECIES 16 INSM2 (ENSCSAG00000019401) ENSCSAG00000015517 NFKBIA (ENSCSAG00000015526) PSMA6 (ENSCSAG00000015552) PRORP (ENSCSAG00000015561) PPP2R3C (ENSCSAG00000015566) FAM177A1 (ENSCSAG00000015569) SRP54 (ENSCSAG00000015575) BAZ1A (ENSCSAG00000015625) ENSCSAG00000015638 SNX6 (ENSCSAG00000015642) EAPP (ENSCSAG00000015646) SPTSSA (ENSCSAG00000015651) EGLN3 (ENSCSAG00000015653) NPAS3 (ENSCSAG00000015658) ENSCSAG00000019400 #22 AKAP6 (ENSCSAG00000015666) ARHGAP5 (ENSCSAG00000015675) ENSCSAG00000015689 NUBPL (ENSCSAG00000015694) GPR33 (ENSCSAG00000019399) DTD2 (ENSCSAG00000015699) HEATR5A (ENSCSAG00000015711) HECTD1 (ENSCSAG00000015728) STRN3 (ENSCSAG00000015737) COCH (ENSCSAG00000015743) SCFD1 (ENSCSAG00000015756) G2E3 (ENSCSAG00000015791) ENSCSAG00000015799 PRKD1 (ENSCSAG00000015806) ENSCSAG00000015809 Vervet Monkey MODERN SPECIES 5 FHL2 (ENSCSAG00000017069) C2orf49 (ENSCSAG00000017074) TGFBRAP1 (ENSCSAG00000017075) GPR45 (ENSCSAG00000019430) MRPS9 (ENSCSAG00000017079) POU3F3 (ENSCSAG00000019429) TMEM182 (ENSCSAG00000017082) MFSD9 (ENSCSAG00000017085) SLC9A2 (ENSCSAG00000017090) SLC9A4 (ENSCSAG00000017094) IL18RAP (ENSCSAG00000017102) IL18R1 (ENSCSAG00000017115) IL1RL1 (ENSCSAG00000017123) IL1RL2 (ENSCSAG00000017133) IL1R1 (ENSCSAG00000017139) ENSCSAG00000017144 #22 IL1R2 (ENSCSAG00000017148) ENSCSAG00000019428 MAP4K4 (ENSCSAG00000017152) RFX8 (ENSCSAG00000017155) CREG2 (ENSCSAG00000017159) RNF149 (ENSCSAG00000017163) CNOT11 (ENSCSAG00000017167) TBC1D8 (ENSCSAG00000017170) NPAS2 (ENSCSAG00000017176) ENSCSAG00000017183 CHST10 (ENSCSAG00000017188) LONRF2 (ENSCSAG00000017190) AFF3 (ENSCSAG00000017193) REV1 (ENSCSAG00000017200) EIF5B (ENSCSAG00000017209) Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00940000162075 ENSGT00410000029590 ENSGT00390000007772.a.c.b ENSGT00390000007772.a.d ENSGT00910000147180 ENSGT00910000147082 ENSGT00390000006095.s ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00910000147512 ENSGT00910000147447 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT00510000046985.i ENSGT01000000214434.A ENSGT00940000156225.d ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f Macaca ANCESTRAL SPECIES 5 ENSGT00940000162075 ENSGT00410000029590 ENSGT00390000007772.a.c.b ENSGT00390000007772.a.d ENSGT00910000147180 ENSGT00910000147082 ENSGT00390000006095.s ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00910000147512 ENSGT00910000147447 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT00510000046985.i ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Pig-tailed macaque MODERN SPECIES 443 FAIM (ENSMNEG00000027770) PIK3CB (ENSMNEG00000001166) FOXL2NB (ENSMNEG00000029429) ENSMNEG00000022093 ENSMNEG00000006917 MRPS22 (ENSMNEG00000034447) COPB2 (ENSMNEG00000039119) RBP2 (ENSMNEG00000040865) ENSMNEG00000039456 RBP1 (ENSMNEG00000042493) NMNAT3 (ENSMNEG00000034277) CLSTN2 (ENSMNEG00000038192) #24 ENSMNEG00000010088 ENSMNEG00000022589 TRIM42 (ENSMNEG00000045001) SLC25A36 (ENSMNEG00000040083) #22 ENSMNEG00000042747 SPSB4 (ENSMNEG00000028739) #23 PXYLP1 (ENSMNEG00000041720) RASA2 (ENSMNEG00000034452) ENSMNEG00000039256 RNF7 (ENSMNEG00000027808) GRK7 (ENSMNEG00000032651) ATP1B3 (ENSMNEG00000035434) TFDP2 (ENSMNEG00000039976) ENSMNEG00000045190 GK5 (ENSMNEG00000038743) XRN1 (ENSMNEG00000034217) ATR (ENSMNEG00000006874) PLS1 (ENSMNEG00000015383) TRPC1 (ENSMNEG00000030705) Macaca_a ANCESTRAL SPECIES 5 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00410000029590 ENSGT00390000007772.a.c.b ENSGT00390000007772.a.d ENSGT00910000147180 ENSGT00910000147082 ENSGT00390000006095.s ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Crab-eating macaque DUPLICATION Crab-eating macaque MODERN SPECIES 11 ESYT3 (ENSMFAG00000038263) CEP70 (ENSMFAG00000038255) FAIM (ENSMFAG00000038121) PIK3CB (ENSMFAG00000002622) FOXL2NB (ENSMFAG00000002086) PRR23A (ENSMFAG00000064336) ENSMFAG00000030211 ENSMFAG00000030216 MRPS22 (ENSMFAG00000035834) COPB2 (ENSMFAG00000030752) RBP2 (ENSMFAG00000039548) RBP1 (ENSMFAG00000031658) NMNAT3 (ENSMFAG00000044228) CLSTN2 (ENSMFAG00000044664) #24 TRIM42 (ENSMFAG00000014452) ENSMFAG00000031013 #22 ENSMFAG00000042001 PXYLP1 (ENSMFAG00000045625) ZBTB38 (ENSMFAG00000021549) ENSMFAG00000030557 RNF7 (ENSMFAG00000051836) GRK7 (ENSMFAG00000001701) ATP1B3 (ENSMFAG00000040649) TFDP2 (ENSMFAG00000040035) GK5 (ENSMFAG00000039065) XRN1 (ENSMFAG00000032599) ATR (ENSMFAG00000001151) ENSMFAG00000054854 PLS1 (ENSMFAG00000002207) TRPC1 (ENSMFAG00000001111) PCOLCE2 (ENSMFAG00000001242) Crab-eating macaque MODERN SPECIES 17 BAZ1A (ENSMFAG00000043129) ENSMFAG00000049174 CFL2 (ENSMFAG00000001352) ENSMFAG00000062650 ENSMFAG00000053943 SNX6 (ENSMFAG00000040770) EAPP (ENSMFAG00000002843) ENSMFAG00000062453 ENSMFAG00000060787 ENSMFAG00000030913 SPTSSA (ENSMFAG00000048755) ENSMFAG00000058983 EGLN3 (ENSMFAG00000036942) ENSMFAG00000057891 NPAS3 (ENSMFAG00000043431) ENSMFAG00000000440 #22 AKAP6 (ENSMFAG00000040818) ARHGAP5 (ENSMFAG00000000350) NUBPL (ENSMFAG00000038751) ENSMFAG00000054026 ENSMFAG00000062632 GPR33 (ENSMFAG00000038012) DTD2 (ENSMFAG00000044459) HEATR5A (ENSMFAG00000031414) HECTD1 (ENSMFAG00000038044) ENSMFAG00000032637 STRN3 (ENSMFAG00000030208) COCH (ENSMFAG00000043586) SCFD1 (ENSMFAG00000039675) G2E3 (ENSMFAG00000033929) PRKD1 (ENSMFAG00000039957) Rhesus MODERN SPECIES 11 ESYT3 (ENSMMUG00000007757) CEP70 (ENSMMUG00000007760) FAIM (ENSMMUG00000008664) PIK3CB (ENSMMUG00000008666) FOXL2 (ENSMMUG00000053063) FOXL2NB (ENSMMUG00000049225) PRR23A (ENSMMUG00000050483) PRR23C (ENSMMUG00000055295) ENSMMUG00000054284 MRPS22 (ENSMMUG00000003048) COPB2 (ENSMMUG00000003051) RBP2 (ENSMMUG00000051934) RBP1 (ENSMMUG00000000290) CLSTN2 (ENSMMUG00000003169) #24 TRIM42 (ENSMMUG00000021392) SLC25A36 (ENSMMUG00000022153) #22 SPSB4 (ENSMMUG00000053344) #23 PXYLP1 (ENSMMUG00000019697) ZBTB38 (ENSMMUG00000031526) RASA2 (ENSMMUG00000009418) RNF7 (ENSMMUG00000006648) GRK7 (ENSMMUG00000007387) ATP1B3 (ENSMMUG00000060612) TFDP2 (ENSMMUG00000011134) GK5 (ENSMMUG00000012151) ENSMMUG00000058668 XRN1 (ENSMMUG00000014038) ATR (ENSMMUG00000007927) PLS1 (ENSMMUG00000055990) TRPC1 (ENSMMUG00000012405) PCOLCE2 (ENSMMUG00000012406) Cercopithecinae_b ANCESTRAL SPECIES ENSGT00390000007364 ENSGT00940000157522 ENSGT00410000029590 ENSGT00390000007772.a.d ENSGT00910000147180 ENSGT00910000147082 ENSGT00390000006095.s ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00910000147512 ENSGT00910000147447 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT01000000214434.A ENSGT00940000156225.d ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Olive baboon MODERN SPECIES 11 ENSPANG00000045868 FOXL2 (ENSPANG00000045964) FOXL2NB (ENSPANG00000034278) ENSPANG00000046989 PRR23C (ENSPANG00000048299) ENSPANG00000031215 MRPS22 (ENSPANG00000021219) COPB2 (ENSPANG00000007050) RBP2 (ENSPANG00000010059) RBP1 (ENSPANG00000036167) NMNAT3 (ENSPANG00000005203) CLSTN2 (ENSPANG00000017988) #24 TRIM42 (ENSPANG00000007233) ENSPANG00000046237 ENSPANG00000050186 SLC25A36 (ENSPANG00000004802) #22 SPSB4 (ENSPANG00000020402) #23 PXYLP1 (ENSPANG00000018293) ZBTB38 (ENSPANG00000018989) RASA2 (ENSPANG00000010060) RNF7 (ENSPANG00000008716) GRK7 (ENSPANG00000026216) ENSPANG00000051223 ATP1B3 (ENSPANG00000016869) TFDP2 (ENSPANG00000005825) GK5 (ENSPANG00000016944) XRN1 (ENSPANG00000010638) ATR (ENSPANG00000005574) PLS1 (ENSPANG00000002797) TRPC1 (ENSPANG00000017825) PCOLCE2 (ENSPANG00000005937) Cercopithecinae_d ANCESTRAL SPECIES 16 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00410000029590 ENSGT00910000147180 ENSGT00910000147082 ENSGT00390000006095.s ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00910000147512 ENSGT00910000147447 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT01000000214434.A ENSGT00940000156225.d ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Drill MODERN SPECIES 367 TRIM42 (ENSMLEG00000035317) ENSMLEG00000037031 SLC25A36 (ENSMLEG00000039216) #22 SPSB4 (ENSMLEG00000037292) #23 Sooty mangabey MODERN SPECIES 656 CEP70 (ENSCATG00000013493) FAIM (ENSCATG00000045167) PIK3CB (ENSCATG00000035624) FOXL2NB (ENSCATG00000036502) ENSCATG00000040710 ENSCATG00000008634 ENSCATG00000044414 COPB2 (ENSCATG00000038728) RBP2 (ENSCATG00000002512) RBP1 (ENSCATG00000018519) NMNAT3 (ENSCATG00000031087) CLSTN2 (ENSCATG00000036787) #24 ENSCATG00000045166 ENSCATG00000005820 TRIM42 (ENSCATG00000029341) SLC25A36 (ENSCATG00000031849) #22 SPSB4 (ENSCATG00000038455) #23 PXYLP1 (ENSCATG00000036840) ZBTB38 (ENSCATG00000005041) RASA2 (ENSCATG00000033775) RNF7 (ENSCATG00000042225) GRK7 (ENSCATG00000018025) ATP1B3 (ENSCATG00000040498) TFDP2 (ENSCATG00000035711) GK5 (ENSCATG00000033849) ENSCATG00000031692 XRN1 (ENSCATG00000041794) ATR (ENSCATG00000034316) PLS1 (ENSCATG00000034817) TRPC1 (ENSCATG00000034251) PCOLCE2 (ENSCATG00000025595) Rhinopithecus ANCESTRAL SPECIES 110 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00410000029590 ENSGT00910000147180 ENSGT00390000006095.s ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.b.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT00510000046985.i ENSGT01000000214434.A ENSGT00940000156225.d ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f Black snub-nosed monkey MODERN SPECIES 1652 ENSRBIG00000035558 COPB2 (ENSRBIG00000043802) RBP2 (ENSRBIG00000038535) RBP1 (ENSRBIG00000035559) NMNAT3 (ENSRBIG00000038555) CLSTN2 (ENSRBIG00000035431) #24 TRIM42 (ENSRBIG00000039037) SLC25A36 (ENSRBIG00000042542) #22 Golden snub-nosed monkey MODERN SPECIES 2072 TRIM42 (ENSRROG00000033793) SLC25A36 (ENSRROG00000037476) #22 ENSRROG00000028830 SPSB4 (ENSRROG00000043824) #23 PXYLP1 (ENSRROG00000022663) ZBTB38 (ENSRROG00000009960) RASA2 (ENSRROG00000039486) ENSRROG00000038402 ENSRROG00000030523 GRK7 (ENSRROG00000038885) ATP1B3 (ENSRROG00000030567) TFDP2 (ENSRROG00000033835) ENSRROG00000034265 GK5 (ENSRROG00000029129) ENSRROG00000043111 ENSRROG00000044183 Hominoidea ANCESTRAL SPECIES 2 ENSGT00940000157522 ENSGT00940000162075 ENSGT00410000029590 ENSGT00390000007772.a.c.b ENSGT00390000007772.a.c.a ENSGT00390000007772.a.d ENSGT00910000147180 ENSGT00910000147082 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.v ENSGT01090000260040.b.b.b.b.a.a.a.a ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f Gibbon MODERN SPECIES 23 ESYT3 (ENSNLEG00000004209) CEP70 (ENSNLEG00000004252) FAIM (ENSNLEG00000004331) PIK3CB (ENSNLEG00000004334) ENSNLEG00000004379 ENSNLEG00000036042 ENSNLEG00000035567 COPB2 (ENSNLEG00000004381) RBP2 (ENSNLEG00000004446) RBP1 (ENSNLEG00000004461) ENSNLEG00000030080 NMNAT3 (ENSNLEG00000004471) CLSTN2 (ENSNLEG00000004476) #24 ENSNLEG00000034232 TRIM42 (ENSNLEG00000004507) SLC25A36 (ENSNLEG00000004520) #22 SPSB4 (ENSNLEG00000004536) #23 ENSNLEG00000033738 ENSNLEG00000034016 PXYLP1 (ENSNLEG00000004544) ZBTB38 (ENSNLEG00000004569) ENSNLEG00000036178 RASA2 (ENSNLEG00000004575) RNF7 (ENSNLEG00000033882) GRK7 (ENSNLEG00000004658) ENSNLEG00000018218 ENSNLEG00000027455 ENSNLEG00000035658 TFDP2 (ENSNLEG00000031256) GK5 (ENSNLEG00000004695) XRN1 (ENSNLEG00000004726) Hominidae ANCESTRAL SPECIES 2 ENSGT00940000157522 ENSGT00940000162075 ENSGT00410000029590 ENSGT00390000007772.a.c.b ENSGT00390000007772.a.c.a ENSGT00390000007772.a.d ENSGT00910000147180 ENSGT00910000147082 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.v ENSGT01090000260040.b.b.b.b.a.a.a.a ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x.a ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f Orangutan MODERN SPECIES 16 CEP70 (ENSPPYG00000014144) FAIM (ENSPPYG00000014145) PIK3CB (ENSPPYG00000014147) FOXL2 (ENSPPYG00000014148) FOXL2NB (ENSPPYG00000038270) PRR23A (ENSPPYG00000014151) PRR23B (ENSPPYG00000014152) PRR23C (ENSPPYG00000014153) MRPS22 (ENSPPYG00000036169) COPB2 (ENSPPYG00000014155) RBP2 (ENSPPYG00000014156) RBP1 (ENSPPYG00000014157) ENSPPYG00000014158 CLSTN2 (ENSPPYG00000014159) #24 TRIM42 (ENSPPYG00000014160) SLC25A36 (ENSPPYG00000040461) #22 SPSB4 (ENSPPYG00000014162) #23 PXYLP1 (ENSPPYG00000014163) ZBTB38 (ENSPPYG00000031145) ENSPPYG00000040016 RASA2 (ENSPPYG00000014165) ENSPPYG00000031196 GRK7 (ENSPPYG00000014168) ENSPPYG00000033921 ATP1B3 (ENSPPYG00000014169) TFDP2 (ENSPPYG00000014170) GK5 (ENSPPYG00000014171) XRN1 (ENSPPYG00000014172) ATR (ENSPPYG00000014173) PLS1 (ENSPPYG00000014174) TRPC1 (ENSPPYG00000014175) Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00940000157522 ENSGT00940000162075 ENSGT00410000029590 ENSGT00390000007772.a.c.b ENSGT00390000007772.a.c.a ENSGT00390000007772.a.d ENSGT00910000147180 ENSGT00910000147082 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT01090000260040.b.b.b.b.a.a.a.a ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x.a.a ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Gorilla MODERN SPECIES 16 PIK3CB (ENSGGOG00000009579) FOXL2 (ENSGGOG00000024690) FOXL2NB (ENSGGOG00000042930) PRR23A (ENSGGOG00000038502) PRR23B (ENSGGOG00000036512) PRR23C (ENSGGOG00000043485) MRPS22 (ENSGGOG00000014871) ENSGGOG00000039588 ENSGGOG00000005780 RBP2 (ENSGGOG00000010274) RBP1 (ENSGGOG00000012301) NMNAT3 (ENSGGOG00000012306) ENSGGOG00000014226 CLSTN2 (ENSGGOG00000007929) #24 TRIM42 (ENSGGOG00000010587) SLC25A36 (ENSGGOG00000024554) #22 SPSB4 (ENSGGOG00000011522) #23 PXYLP1 (ENSGGOG00000001732) RASA2 (ENSGGOG00000023738) ENSGGOG00000037216 RNF7 (ENSGGOG00000001829) GRK7 (ENSGGOG00000013256) ATP1B3 (ENSGGOG00000027111) TFDP2 (ENSGGOG00000007878) GK5 (ENSGGOG00000003657) XRN1 (ENSGGOG00000008047) ATR (ENSGGOG00000008083) PLS1 (ENSGGOG00000002849) TRPC1 (ENSGGOG00000026926) PCOLCE2 (ENSGGOG00000007872) U2SURP (ENSGGOG00000005563) Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00940000157522 ENSGT00940000162075 ENSGT00410000029590 ENSGT00390000007772.a.c.b ENSGT00390000007772.a.c.a ENSGT00390000007772.a.d ENSGT00910000147180 ENSGT00910000147082 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT01090000260040.b.b.b.b.a.a.a.a ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x.a.a ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Human MODERN SPECIES 15 CEP70 (ENSG00000114107) FAIM (ENSG00000158234) PIK3CB (ENSG00000051382) FOXL2 (ENSG00000183770) FOXL2NB (ENSG00000206262) PRR23A (ENSG00000206260) MRPS22 (ENSG00000175110) PRR23B (ENSG00000184814) PRR23C (ENSG00000233701) COPB2 (ENSG00000184432) RBP2 (ENSG00000114113) RBP1 (ENSG00000114115) NMNAT3 (ENSG00000163864) CLSTN2 (ENSG00000158258) #24 TRIM42 (ENSG00000155890) SLC25A36 (ENSG00000114120) #22 SPSB4 (ENSG00000175093) #23 PXYLP1 (ENSG00000155893) ZBTB38 (ENSG00000177311) RASA2 (ENSG00000155903) RNF7 (ENSG00000114125) GRK7 (ENSG00000114124) ATP1B3 (ENSG00000069849) TFDP2 (ENSG00000114126) GK5 (ENSG00000175066) XRN1 (ENSG00000114127) ATR (ENSG00000175054) PLS1 (ENSG00000120756) TRPC1 (ENSG00000144935) PCOLCE2 (ENSG00000163710) PAQR9 (ENSG00000188582) Pan ANCESTRAL SPECIES 2 ENSGT00940000157522 ENSGT00410000029590 ENSGT00390000007772.a.c.b ENSGT00390000007772.a.c.a ENSGT00390000007772.a.d ENSGT00910000147180 ENSGT00910000147082 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00910000147512 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT01090000260040.b.b.b.b.a.a.a.a ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x.a.a ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Bonobo MODERN SPECIES 16 PIK3CB (ENSPPAG00000031755) FOXL2NB (ENSPPAG00000011213) PRR23B (ENSPPAG00000001951) PRR23C (ENSPPAG00000039221) ENSPPAG00000003060 ENSPPAG00000027270 MRPS22 (ENSPPAG00000025143) COPB2 (ENSPPAG00000035821) RBP2 (ENSPPAG00000031530) RBP1 (ENSPPAG00000027809) ENSPPAG00000038038 ENSPPAG00000044006 CLSTN2 (ENSPPAG00000036614) #24 ENSPPAG00000041953 TRIM42 (ENSPPAG00000028240) SLC25A36 (ENSPPAG00000030739) #22 SPSB4 (ENSPPAG00000029910) #23 PXYLP1 (ENSPPAG00000030848) RASA2 (ENSPPAG00000036725) ENSPPAG00000042586 RNF7 (ENSPPAG00000036147) GRK7 (ENSPPAG00000037494) ENSPPAG00000038971 TFDP2 (ENSPPAG00000031311) GK5 (ENSPPAG00000041760) XRN1 (ENSPPAG00000010180) ATR (ENSPPAG00000042807) PLS1 (ENSPPAG00000042289) TRPC1 (ENSPPAG00000004252) PCOLCE2 (ENSPPAG00000029354) PAQR9 (ENSPPAG00000009521) Chimpanzee MODERN SPECIES 16 FOXL2NB (ENSPTRG00000048064) PRR23A (ENSPTRG00000040873) PRR23B (ENSPTRG00000015455) PRR23C (ENSPTRG00000030111) ENSPTRG00000049861 ENSPTRG00000045823 MRPS22 (ENSPTRG00000015458) COPB2 (ENSPTRG00000015459) RBP2 (ENSPTRG00000015460) RBP1 (ENSPTRG00000015461) NMNAT3 (ENSPTRG00000015462) ENSPTRG00000045045 CLSTN2 (ENSPTRG00000015463) #24 ENSPTRG00000044651 TRIM42 (ENSPTRG00000015465) SLC25A36 (ENSPTRG00000015467) #22 SPSB4 (ENSPTRG00000015468) #23 PXYLP1 (ENSPTRG00000015469) ZBTB38 (ENSPTRG00000030108) RASA2 (ENSPTRG00000015472) ENSPTRG00000046551 RNF7 (ENSPTRG00000039248) GRK7 (ENSPTRG00000052431) ATP1B3 (ENSPTRG00000015476) TFDP2 (ENSPTRG00000015479) GK5 (ENSPTRG00000015480) XRN1 (ENSPTRG00000015482) ATR (ENSPTRG00000015483) PLS1 (ENSPTRG00000015484) TRPC1 (ENSPTRG00000015485) PCOLCE2 (ENSPTRG00000015486) Platyrrhini ANCESTRAL SPECIES 22 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00410000029590 ENSGT00390000007772.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.a ENSGT00940000160511 ENSGT01030000234579.A.b.y.a ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Mas night monkey MODERN SPECIES 401 ENSANAG00000032380 SLC25A36 (ENSANAG00000028870) #22 SPSB4 (ENSANAG00000033201) #23 ENSANAG00000025990 ZBTB38 (ENSANAG00000017076) RASA2 (ENSANAG00000034912) ENSANAG00000032669 ENSANAG00000028682 GRK7 (ENSANAG00000034218) ENSANAG00000031514 TFDP2 (ENSANAG00000022473) GK5 (ENSANAG00000028250) XRN1 (ENSANAG00000029013) ATR (ENSANAG00000025376) PLS1 (ENSANAG00000033207) TRPC1 (ENSANAG00000020387) PCOLCE2 (ENSANAG00000033412) Cebidae ANCESTRAL SPECIES 22 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00410000029590 ENSGT00390000007772.a.e ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.a ENSGT00940000160511 ENSGT01030000234579.A.b.y.a ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Cebidae_a ANCESTRAL SPECIES 12 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00410000029590 ENSGT00390000007772.a.e ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000158201 ENSGT00940000155481.u.a ENSGT00940000160511 ENSGT01030000234579.A.b.z ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b.k ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 ENSGT00390000010687.a.a Capuchin MODERN SPECIES 30 ESYT3 (ENSCCAG00000028893) CEP70 (ENSCCAG00000031960) ENSCCAG00000024754 ENSCCAG00000030899 PIK3CB (ENSCCAG00000028623) FOXL2NB (ENSCCAG00000029666) ENSCCAG00000001067 MRPS22 (ENSCCAG00000031308) COPB2 (ENSCCAG00000022997) RBP2 (ENSCCAG00000034429) RBP1 (ENSCCAG00000037002) NMNAT3 (ENSCCAG00000036866) CLSTN2 (ENSCCAG00000029042) #24 TRIM42 (ENSCCAG00000033251) SLC25A36 (ENSCCAG00000036553) #22 SPSB4 (ENSCCAG00000032923) #23 PXYLP1 (ENSCCAG00000037463) RASA2 (ENSCCAG00000037845) RNF7 (ENSCCAG00000020264) GRK7 (ENSCCAG00000025796) ENSCCAG00000034843 TFDP2 (ENSCCAG00000026731) ENSCCAG00000032480 GK5 (ENSCCAG00000028734) XRN1 (ENSCCAG00000034800) ATR (ENSCCAG00000037606) ENSCCAG00000002177 TRPC1 (ENSCCAG00000034231) PCOLCE2 (ENSCCAG00000033830) PAQR9 (ENSCCAG00000029369) Bolivian squirrel monkey MODERN SPECIES 204 FOXL2NB (ENSSBOG00000027764) ENSSBOG00000023833 MRPS22 (ENSSBOG00000006732) COPB2 (ENSSBOG00000029777) RBP2 (ENSSBOG00000026602) RBP1 (ENSSBOG00000029287) NMNAT3 (ENSSBOG00000021646) CLSTN2 (ENSSBOG00000028495) #24 TRIM42 (ENSSBOG00000024063) SLC25A36 (ENSSBOG00000033900) #22 SPSB4 (ENSSBOG00000027901) #23 PXYLP1 (ENSSBOG00000030966) RASA2 (ENSSBOG00000015504) ENSSBOG00000020609 GRK7 (ENSSBOG00000029455) ATP1B3 (ENSSBOG00000025166) ENSSBOG00000005873 TFDP2 (ENSSBOG00000029977) GK5 (ENSSBOG00000010917) XRN1 (ENSSBOG00000029561) ATR (ENSSBOG00000031886) PLS1 (ENSSBOG00000026765) TRPC1 (ENSSBOG00000025787) PCOLCE2 (ENSSBOG00000027101) CMTM8 (ENSSBOG00000032763) Marmoset MODERN SPECIES 8 FAIM (ENSCJAG00000002299) ENSCJAG00000076544 PIK3CB (ENSCJAG00000002252) FOXL2 (ENSCJAG00000041357) FOXL2NB (ENSCJAG00000002249) ENSCJAG00000002248 ENSCJAG00000046249 MRPS22 (ENSCJAG00000002236) COPB2 (ENSCJAG00000002200) RBP2 (ENSCJAG00000002188) ENSCJAG00000085868 ENSCJAG00000079234 NMNAT3 (ENSCJAG00000041699) CLSTN2 (ENSCJAG00000002137) #24 TRIM42 (ENSCJAG00000002126) SLC25A36 (ENSCJAG00000002092) #22 SPSB4 (ENSCJAG00000002091) #23 PXYLP1 (ENSCJAG00000002072) ENSCJAG00000079923 ZBTB38 (ENSCJAG00000048397) ENSCJAG00000076787 RASA2 (ENSCJAG00000001994) ENSCJAG00000082838 GRK7 (ENSCJAG00000001987) ENSCJAG00000001981 ENSCJAG00000001950 GK5 (ENSCJAG00000001924) XRN1 (ENSCJAG00000001872) ATR (ENSCJAG00000001797) PLS1 (ENSCJAG00000001762) TRPC1 (ENSCJAG00000001739) Tarsier MODERN SPECIES 3641 SLC25A36 (ENSTSYG00000007817) #22 ENSTSYG00000032343 SPSB4 (ENSTSYG00000003562) #23 PXYLP1 (ENSTSYG00000031200) Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909.d ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Lemuriformes ANCESTRAL SPECIES 30 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909.d ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES ENSMICG00000049365 ENSMICG00000049206 KPNA4 (ENSMICG00000049332) ARL14 (ENSMICG00000049117) ENSMICG00000049540 ENSMICG00000049189 PPM1L (ENSMICG00000049405) ENSMICG00000049361 NMD3 (ENSMICG00000049196) SPTSSB (ENSMICG00000048968) OTOL1 (ENSMICG00000049331) RBP1 (ENSMICG00000048900) ENSMICG00000048995 CLSTN2 (ENSMICG00000049019) #24 TRIM42 (ENSMICG00000049317) ENSMICG00000048906 #22 SPSB4 (ENSMICG00000049106) #23 PXYLP1 (ENSMICG00000048945) ZBTB38 (ENSMICG00000049344) RASA2 (ENSMICG00000049339) RNF7 (ENSMICG00000049320) GRK7 (ENSMICG00000049413) ATP1B3 (ENSMICG00000049313) ENSMICG00000049520 TFDP2 (ENSMICG00000049186) GK5 (ENSMICG00000049424) XRN1 (ENSMICG00000048948) ATR (ENSMICG00000049477) PLS1 (ENSMICG00000049092) TRPC1 (ENSMICG00000049470) PCOLCE2 (ENSMICG00000048890) Mouse lemur MODERN SPECIES 169 ENSMICG00000030636 ENSMICG00000036554 TMLHE (ENSMICG00000010663) RAB39B (ENSMICG00000044410) VBP1 (ENSMICG00000033175) BRCC3 (ENSMICG00000036150) MTCP1 (ENSMICG00000037190) CMC4 (ENSMICG00000046262) ENSMICG00000028940 ENSMICG00000047033 ENSMICG00000036428 ENSMICG00000046481 ENSMICG00000007052 F8 (ENSMICG00000029671) ENSMICG00000037635 ENSMICG00000009653 #22 ENSMICG00000048060 SMIM9 (ENSMICG00000043321) MPP1 (ENSMICG00000002828) ENSMICG00000002818 GAB3 (ENSMICG00000000264) FLNA (ENSMICG00000004663) EMD (ENSMICG00000004682) ENSMICG00000033705 DNASE1L1 (ENSMICG00000035242) TAFAZZIN (ENSMICG00000030766) ATP6AP1 (ENSMICG00000016405) GDI1 (ENSMICG00000016418) FAM50A (ENSMICG00000016428) PLXNA3 (ENSMICG00000016439) UBL4A (ENSMICG00000016459) Lemuriformes_a ANCESTRAL SPECIES 53 ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00390000007772.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909.d ENSGT00940000153988.B.f ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Coquerels sifaka MODERN SPECIES 123 MRAS (ENSPCOG00000023517) ESYT3 (ENSPCOG00000003756) CEP70 (ENSPCOG00000014192) FAIM (ENSPCOG00000018872) PIK3CB (ENSPCOG00000019996) ENSPCOG00000012505 ENSPCOG00000022269 MRPS22 (ENSPCOG00000003593) COPB2 (ENSPCOG00000017801) RBP2 (ENSPCOG00000017331) RBP1 (ENSPCOG00000017114) NMNAT3 (ENSPCOG00000021175) CLSTN2 (ENSPCOG00000024936) #24 ENSPCOG00000016353 TRIM42 (ENSPCOG00000027829) SLC25A36 (ENSPCOG00000000490) #22 Greater bamboo lemur MODERN SPECIES 413 MRAS (ENSPSMG00000020026) ESYT3 (ENSPSMG00000020044) CEP70 (ENSPSMG00000020133) FAIM (ENSPSMG00000020153) PIK3CB (ENSPSMG00000020194) ENSPSMG00000020225 ENSPSMG00000020236 MRPS22 (ENSPSMG00000020288) COPB2 (ENSPSMG00000020353) ENSPSMG00000020368 RBP2 (ENSPSMG00000020371) RBP1 (ENSPSMG00000020385) NMNAT3 (ENSPSMG00000020415) CLSTN2 (ENSPSMG00000020453) #24 TRIM42 (ENSPSMG00000020469) SLC25A36 (ENSPSMG00000020544) #22 ENSPSMG00000020562 SPSB4 (ENSPSMG00000020563) #23 PXYLP1 (ENSPSMG00000020682) ZBTB38 (ENSPSMG00000020710) RASA2 (ENSPSMG00000020773) RNF7 (ENSPSMG00000020807) GRK7 (ENSPSMG00000020813) ATP1B3 (ENSPSMG00000020824) Bushbaby MODERN SPECIES 147 CEP70 (ENSOGAG00000004043) FAIM (ENSOGAG00000004045) PIK3CB (ENSOGAG00000004047) ENSOGAG00000033392 ENSOGAG00000015899 ENSOGAG00000031233 ENSOGAG00000024655 MRPS22 (ENSOGAG00000010261) COPB2 (ENSOGAG00000010265) RBP2 (ENSOGAG00000010271) ENSOGAG00000033121 RBP1 (ENSOGAG00000004262) NMNAT3 (ENSOGAG00000004263) CLSTN2 (ENSOGAG00000017033) #24 TRIM42 (ENSOGAG00000009994) SLC25A36 (ENSOGAG00000003805) #22 SPSB4 (ENSOGAG00000027600) #23 PXYLP1 (ENSOGAG00000009393) ZBTB38 (ENSOGAG00000009394) RASA2 (ENSOGAG00000002470) RNF7 (ENSOGAG00000008659) GRK7 (ENSOGAG00000009576) ATP1B3 (ENSOGAG00000008662) TFDP2 (ENSOGAG00000000168) GK5 (ENSOGAG00000000169) XRN1 (ENSOGAG00000000170) ATR (ENSOGAG00000000171) PLS1 (ENSOGAG00000000755) TRPC1 (ENSOGAG00000000759) PCOLCE2 (ENSOGAG00000013136) PAQR9 (ENSOGAG00000003917) Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909 ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Tree shrew MODERN SPECIES 541 SLC25A36 (ENSTBEG00000001759) #22 Glires ANCESTRAL SPECIES 2 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Lagomorpha ANCESTRAL SPECIES ENSGT00940000154369.d #22 Pika MODERN SPECIES 358 SLC25A36 (ENSOPRG00000011568) #22 Rabbit MODERN SPECIES KCNV2 (ENSOCUG00000004385) ENSOCUG00000004189 ENSOCUG00000039572 RFX3 (ENSOCUG00000014086) ENSOCUG00000023393 ENSOCUG00000027590 GLIS3 (ENSOCUG00000023004) ENSOCUG00000036407 ENSOCUG00000013264 ENSOCUG00000026987 ENSOCUG00000022202 PLPP6 (ENSOCUG00000003465) SPATA6L (ENSOCUG00000003455) CDC37L1 (ENSOCUG00000003468) ENSOCUG00000011411 ENSOCUG00000013279 #22 RCL1 (ENSOCUG00000008161) JAK2 (ENSOCUG00000016853) ENSOCUG00000037721 INSL6 (ENSOCUG00000013682) ENSOCUG00000031086 ENSOCUG00000037426 #22 ENSOCUG00000030169 ENSOCUG00000038359 ENSOCUG00000030357 ENSOCUG00000025640 PLGRKT (ENSOCUG00000008095) CD274 (ENSOCUG00000008117) ENSOCUG00000032240 RIC1 (ENSOCUG00000010108) ERMP1 (ENSOCUG00000017609) Rodentia ANCESTRAL SPECIES 2 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Rodentia_B ANCESTRAL SPECIES 2 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Myomorpha ANCESTRAL SPECIES 58 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Muroidea ANCESTRAL SPECIES 71 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Upper Galilee mountains blind mole rat MODERN SPECIES 1116 Trim42 (ENSNGAG00000000065) Slc25a36 (ENSNGAG00000001592) #22 Spsb4 (ENSNGAG00000012066) #23 ENSNGAG00000012676 Muroidea_A ANCESTRAL SPECIES 6 ENSGT00390000009029 ENSGT00390000007364.b ENSGT00940000157522 ENSGT00940000154829.d ENSGT00390000007364.a ENSGT00940000162075 ENSGT00390000007772.f ENSGT00390000007772.e ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Murinae ANCESTRAL SPECIES 3 ENSGT00390000007364.b ENSGT00940000157522 ENSGT00940000154829.d ENSGT00390000007364.a ENSGT00940000162075 ENSGT01050000248377 ENSGT00390000007772.f ENSGT00390000007772.e ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00960000192143 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Mus ANCESTRAL SPECIES 4 ENSGT00940000154829.d ENSGT00390000007364.a ENSGT00940000162075 ENSGT01050000248377 ENSGT00390000007772.f ENSGT00390000007772.e.g ENSGT00390000007772.e.h.b ENSGT00390000007772.e.h.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00960000192143 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Mus_A ANCESTRAL SPECIES 4 ENSGT00940000157522 ENSGT00940000154829.d ENSGT00390000007364.a ENSGT00940000162075 ENSGT01050000248377 ENSGT00390000007772.f ENSGT00390000007772.e.g ENSGT00390000007772.e.h.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00960000192143 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Mus_B ANCESTRAL SPECIES 3 ENSGT00940000154829.d ENSGT00390000007364.a ENSGT00940000162075 ENSGT01050000248377 ENSGT00390000007772.f ENSGT00390000007772.e.g ENSGT00390000007772.e.h.b ENSGT00390000007772.e.h.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481.q.b ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00960000192143 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Mouse MODERN SPECIES 18 Pik3cb (ENSMUSG00000032462) Gm1123 (ENSMUSG00000044860) Faim (ENSMUSG00000032463) Foxl2 (ENSMUSG00000050397) 7420426K07Rik (ENSMUSG00000074123) Prr23a3 (ENSMUSG00000090470) Prr23a2 (ENSMUSG00000063058) Prr23a1 (ENSMUSG00000091080) Mrps22 (ENSMUSG00000032459) Copb2 (ENSMUSG00000032458) Rbp2 (ENSMUSG00000032454) Rbp1 (ENSMUSG00000046402) Nmnat3 (ENSMUSG00000032456) Clstn2 (ENSMUSG00000032452) #24 Trim42 (ENSMUSG00000032451) Slc25a36 (ENSMUSG00000032449) #22 Spsb4 (ENSMUSG00000046997) #23 Pxylp1 (ENSMUSG00000043587) Zbtb38 (ENSMUSG00000040433) Rasa2 (ENSMUSG00000032413) Gm28729 (ENSMUSG00000099564) Rnf7 (ENSMUSG00000051234) Atp1b3 (ENSMUSG00000032412) Tfdp2 (ENSMUSG00000032411) Gk5 (ENSMUSG00000041440) Xrn1 (ENSMUSG00000032410) Atr (ENSMUSG00000032409) Pls1 (ENSMUSG00000049493) Trpc1 (ENSMUSG00000032839) Pcolce2 (ENSMUSG00000015354) Paqr9 (ENSMUSG00000064225) Mus_C ANCESTRAL SPECIES 23 ENSGT00940000157522 ENSGT00940000154829.d ENSGT00390000007364.a ENSGT00940000162075 ENSGT01050000248377 ENSGT00390000007772.f ENSGT00390000007772.e.g ENSGT00390000007772.e.h.a ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.q.b ENSGT00530000068221 ENSGT00940000155481.r ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00960000192143 ENSGT00950000183097.a.b ENSGT01060000248594.f Steppe mouse MODERN SPECIES 3378 Foxl2 (ENSMSIG00000014987) ENSMSIG00000014993 7420426K07Rik (ENSMSIG00000015012) ENSMSIG00000015018 Prr23a3 (ENSMSIG00000015032) Prr23a1 (ENSMSIG00000015037) Mrps22 (ENSMSIG00000015058) Copb2 (ENSMSIG00000015074) ENSMSIG00000015116 Rbp2 (ENSMSIG00000015122) ENSMSIG00000015144 Nmnat3 (ENSMSIG00000015178) Clstn2 (ENSMSIG00000015272) #24 Trim42 (ENSMSIG00000015370) ENSMSIG00000015401 Slc25a36 (ENSMSIG00000015406) #22 Spsb4 (ENSMSIG00000015457) #23 ENSMSIG00000015465 Pxylp1 (ENSMSIG00000015485) ENSMSIG00000015549 ENSMSIG00000015553 ENSMSIG00000015558 Zbtb38 (ENSMSIG00000015564) Rasa2 (ENSMSIG00000015576) Gm28729 (ENSMSIG00000015659) ENSMSIG00000015688 Atp1b3 (ENSMSIG00000015722) Tfdp2 (ENSMSIG00000015771) ENSMSIG00000015907 Xrn1 (ENSMSIG00000016035) Atr (ENSMSIG00000016256) spretus MODERN SPECIES 18 Pik3cb (MGP_SPRETEiJ_G0033702) Faim (MGP_SPRETEiJ_G0033701) Foxl2 (MGP_SPRETEiJ_G0033700) 7420426K07Rik (MGP_SPRETEiJ_G0033699) MGP_SPRETEiJ_G0033698 MGP_SPRETEiJ_G0033697 MGP_SPRETEiJ_G0033696 Mrps22 (MGP_SPRETEiJ_G0033695) Copb2 (MGP_SPRETEiJ_G0033694) Rbp2 (MGP_SPRETEiJ_G0033693) Rbp1 (MGP_SPRETEiJ_G0033692) MGP_SPRETEiJ_G0033691 Nmnat3 (MGP_SPRETEiJ_G0033690) Clstn2 (MGP_SPRETEiJ_G0033689) #24 Trim42 (MGP_SPRETEiJ_G0033688) Slc25a36 (MGP_SPRETEiJ_G0033687) #22 Spsb4 (MGP_SPRETEiJ_G0033686) #23 Pxylp1 (MGP_SPRETEiJ_G0033685) Zbtb38 (MGP_SPRETEiJ_G0033684) Rasa2 (MGP_SPRETEiJ_G0033683) Rnf7 (MGP_SPRETEiJ_G0033682) Atp1b3 (MGP_SPRETEiJ_G0033681) Tfdp2 (MGP_SPRETEiJ_G0033680) Gk5 (MGP_SPRETEiJ_G0033679) Xrn1 (MGP_SPRETEiJ_G0033678) Atr (MGP_SPRETEiJ_G0033677) Pls1 (MGP_SPRETEiJ_G0033676) Trpc1 (MGP_SPRETEiJ_G0033675) Pcolce2 (MGP_SPRETEiJ_G0033674) Paqr9 (MGP_SPRETEiJ_G0033673) U2surp (MGP_SPRETEiJ_G0033672) Ryukyu mouse MODERN SPECIES 18 Pik3cb (MGP_CAROLIEiJ_G0032558) Gm1123 (MGP_CAROLIEiJ_G0032557) Faim (MGP_CAROLIEiJ_G0032556) Foxl2 (MGP_CAROLIEiJ_G0032555) 7420426K07Rik (MGP_CAROLIEiJ_G0032554) MGP_CAROLIEiJ_G0032553 MGP_CAROLIEiJ_G0032552 MGP_CAROLIEiJ_G0032551 Mrps22 (MGP_CAROLIEiJ_G0032550) Copb2 (MGP_CAROLIEiJ_G0032549) Rbp2 (MGP_CAROLIEiJ_G0032548) Rbp1 (MGP_CAROLIEiJ_G0032547) Nmnat3 (MGP_CAROLIEiJ_G0032546) Clstn2 (MGP_CAROLIEiJ_G0032545) #24 Trim42 (MGP_CAROLIEiJ_G0032544) Slc25a36 (MGP_CAROLIEiJ_G0032543) #22 Spsb4 (MGP_CAROLIEiJ_G0032542) #23 Pxylp1 (MGP_CAROLIEiJ_G0032541) Zbtb38 (MGP_CAROLIEiJ_G0032540) Rasa2 (MGP_CAROLIEiJ_G0032539) Atp1b3 (MGP_CAROLIEiJ_G0032538) Tfdp2 (MGP_CAROLIEiJ_G0032537) Xrn1 (MGP_CAROLIEiJ_G0032535) MGP_CAROLIEiJ_G0032534 MGP_CAROLIEiJ_G0032533 Trpc1 (MGP_CAROLIEiJ_G0032532) Paqr9 (MGP_CAROLIEiJ_G0032531) MGP_CAROLIEiJ_G0032530 Chst2 (MGP_CAROLIEiJ_G0032529) MGP_CAROLIEiJ_G0032527 Plod2 (MGP_CAROLIEiJ_G0032526) Shrew mouse MODERN SPECIES 1 Faiml (MGP_PahariEiJ_G0015428) Pik3cb (MGP_PahariEiJ_G0015427) Faim (MGP_PahariEiJ_G0015426) Foxl2 (MGP_PahariEiJ_G0015425) MGP_PahariEiJ_G0015424 MGP_PahariEiJ_G0015423 MGP_PahariEiJ_G0015422 Prr23a2 (MGP_PahariEiJ_G0015421) Mrps22 (MGP_PahariEiJ_G0015420) Copb2 (MGP_PahariEiJ_G0015419) Rbp2 (MGP_PahariEiJ_G0015418) Rbp1 (MGP_PahariEiJ_G0015417) Nmnat3 (MGP_PahariEiJ_G0015416) Clstn2 (MGP_PahariEiJ_G0015415) #24 Trim42 (MGP_PahariEiJ_G0015414) Slc25a36 (MGP_PahariEiJ_G0015413) #22 Spsb4 (MGP_PahariEiJ_G0015412) #23 Pxylp1 (MGP_PahariEiJ_G0015411) Zbtb38 (MGP_PahariEiJ_G0015410) Rasa2 (MGP_PahariEiJ_G0015409) MGP_PahariEiJ_G0015408 Atp1b3 (MGP_PahariEiJ_G0015407) Tfdp2 (MGP_PahariEiJ_G0015406) Gk5 (MGP_PahariEiJ_G0015405) Xrn1 (MGP_PahariEiJ_G0015404) Atr (MGP_PahariEiJ_G0015403) Pls1 (MGP_PahariEiJ_G0015402) Trpc1 (MGP_PahariEiJ_G0015401) Pcolce2 (MGP_PahariEiJ_G0015400) Paqr9 (MGP_PahariEiJ_G0015399) U2surp (MGP_PahariEiJ_G0015398) Rat DUPLICATION Rat MODERN SPECIES 18 Faim (ENSRNOG00000030069) Foxl2 (ENSRNOG00000017190) ENSRNOG00000067226 Prr23d1 (ENSRNOG00000061716) Prr23a2 (ENSRNOG00000065507) Prr23d2 (ENSRNOG00000067755) Prr23a1 (ENSRNOG00000070252) Mrps22 (ENSRNOG00000047984) Copb2 (ENSRNOG00000060723) Rbp2 (ENSRNOG00000013932) Rbp1 (ENSRNOG00000013794) Nmnat3 (ENSRNOG00000013585) Clstn2 (ENSRNOG00000043085) #24 Trim42 (ENSRNOG00000048975) Rps17 (ENSRNOG00000045885) Slc25a36 (ENSRNOG00000013802) #22 AABR07071210.1 (ENSRNOG00000023330) Spsb4 (ENSRNOG00000012862) #23 Pxylp1 (ENSRNOG00000012480) Zbtb38 (ENSRNOG00000012386) Rasa2 (ENSRNOG00000011909) LOC102551788 (ENSRNOG00000053034) Rnf7 (ENSRNOG00000011663) AABR07067339.1 (ENSRNOG00000022456) Atp1b3 (ENSRNOG00000011501) AABR07071195.1 (ENSRNOG00000030296) Tfdp2 (ENSRNOG00000011241) Gk5 (ENSRNOG00000010942) Xrn1 (ENSRNOG00000042951) ENSRNOG00000066967 Atr (ENSRNOG00000010027) Rat MODERN SPECIES 10 Lrrc29 (ENSRNOG00000025231) Elmo3 (ENSRNOG00000015800) E2f4 (ENSRNOG00000015708) Matcap1 (ENSRNOG00000015625) Nol3 (ENSRNOG00000015588) Hsf4 (ENSRNOG00000015253) Fbxl8 (ENSRNOG00000015242) Tradd (ENSRNOG00000015179) B3gnt9 (ENSRNOG00000053895) Phaf1 (ENSRNOG00000014668) Cbfb (ENSRNOG00000014647) Ces4a (ENSRNOG00000014257) ENSRNOG00000066514 Ces2h (ENSRNOG00000039079) Ces2g (ENSRNOG00000070043) Slc25a36l1 (ENSRNOG00000054284) #22 ENSRNOG00000070405 Rps27a-ps6 (ENSRNOG00000029317) Nr3c2 (ENSRNOG00000034007) LOC102552913 (ENSRNOG00000027022) Arhgap10 (ENSRNOG00000013152) Prmt9 (ENSRNOG00000012928) Tmem184c (ENSRNOG00000012860) Ednra (ENSRNOG00000012721) ENSRNOG00000062839 Ttc29 (ENSRNOG00000012342) Pou4f2 (ENSRNOG00000012167) AABR07043626.1 (ENSRNOG00000033487) Rbmxl1 (ENSRNOG00000062375) Slc10a7 (ENSRNOG00000011991) Zfp827 (ENSRNOG00000011697) Cricetidae ANCESTRAL SPECIES 4 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364.b ENSGT00940000157522 ENSGT00940000154829.d ENSGT00390000007364.a ENSGT00940000162075 ENSGT00390000007772.e ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Cricetinae ANCESTRAL SPECIES 6 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364.b ENSGT00940000157522 ENSGT00940000154829.d ENSGT00390000007364.a ENSGT00940000162075 ENSGT00390000007772.e ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Chinese hamster chok1gshd MODERN SPECIES 284 Pik3cb (ENSCGRG00001015103) Gm1123 (ENSCGRG00001017449) Faim (ENSCGRG00001020799) Foxl2 (ENSCGRG00001004934) ENSCGRG00001011938 ENSCGRG00001023558 ENSCGRG00001012181 Mrps22 (ENSCGRG00001010107) Copb2 (ENSCGRG00001000296) ENSCGRG00001007659 Rbp2 (ENSCGRG00001013198) Rbp1 (ENSCGRG00001020893) Nmnat3 (ENSCGRG00001022660) Clstn2 (ENSCGRG00001020983) #24 Trim42 (ENSCGRG00001002575) Slc25a36 (ENSCGRG00001006109) #22 Spsb4 (ENSCGRG00001018096) #23 Pxylp1 (ENSCGRG00001018642) Zbtb38 (ENSCGRG00001001498) Rasa2 (ENSCGRG00001008148) Gm28729 (ENSCGRG00001023152) ENSCGRG00001019917 Atp1b3 (ENSCGRG00001014009) Tfdp2 (ENSCGRG00001015207) Gk5 (ENSCGRG00001021959) Xrn1 (ENSCGRG00001019411) Atr (ENSCGRG00001018561) Pls1 (ENSCGRG00001019620) Trpc1 (ENSCGRG00001008354) Pcolce2 (ENSCGRG00001024152) Paqr9 (ENSCGRG00001011034) Cricetidae_B ANCESTRAL SPECIES 23 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364.b ENSGT00940000157522 ENSGT00940000154829.d ENSGT00390000007364.a ENSGT00940000162075 ENSGT00390000007772.e ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 Prairie vole MODERN SPECIES 95 ENSMOCG00000012631 Mrps22 (ENSMOCG00000020667) Copb2 (ENSMOCG00000014780) Rbp2 (ENSMOCG00000012766) Rbp1 (ENSMOCG00000016179) Nmnat3 (ENSMOCG00000011048) ENSMOCG00000018441 Clstn2 (ENSMOCG00000001008) #24 Trim42 (ENSMOCG00000001679) Slc25a36 (ENSMOCG00000019824) #22 Spsb4 (ENSMOCG00000012549) #23 Pxylp1 (ENSMOCG00000009663) Zbtb38 (ENSMOCG00000017136) Rasa2 (ENSMOCG00000000075) Gm28729 (ENSMOCG00000015027) ENSMOCG00000019098 Atp1b3 (ENSMOCG00000007305) Tfdp2 (ENSMOCG00000004728) Gk5 (ENSMOCG00000000891) Xrn1 (ENSMOCG00000008665) Atr (ENSMOCG00000015022) Pls1 (ENSMOCG00000001489) Trpc1 (ENSMOCG00000000260) Pcolce2 (ENSMOCG00000008199) Paqr9 (ENSMOCG00000001088) Northern American deer mouse MODERN SPECIES 20 ENSPEMG00000026638 Pik3cb (ENSPEMG00000021133) Gm1123 (ENSPEMG00000008461) Faim (ENSPEMG00000015497) Foxl2 (ENSPEMG00000005563) ENSPEMG00000025013 ENSPEMG00000026694 ENSPEMG00000025370 Mrps22 (ENSPEMG00000020399) Copb2 (ENSPEMG00000015558) Rbp2 (ENSPEMG00000016242) Rbp1 (ENSPEMG00000020449) Nmnat3 (ENSPEMG00000020493) Clstn2 (ENSPEMG00000020916) #24 Trim42 (ENSPEMG00000020887) Slc25a36 (ENSPEMG00000029457) #22 Spsb4 (ENSPEMG00000021848) #23 Pxylp1 (ENSPEMG00000027594) ENSPEMG00000001384 Zbtb38 (ENSPEMG00000021180) ENSPEMG00000020968 Rasa2 (ENSPEMG00000020689) Gm28729 (ENSPEMG00000021490) ENSPEMG00000020541 ENSPEMG00000025894 Tfdp2 (ENSPEMG00000020459) Gk5 (ENSPEMG00000021213) ENSPEMG00000028629 Xrn1 (ENSPEMG00000020610) Atr (ENSPEMG00000022407) Pls1 (ENSPEMG00000023583) Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 103 ENSJJAG00000021667 Mrps22 (ENSJJAG00000021884) Copb2 (ENSJJAG00000022143) Rbp2 (ENSJJAG00000022560) Rbp1 (ENSJJAG00000022589) Nmnat3 (ENSJJAG00000000403) ENSJJAG00000000784 Clstn2 (ENSJJAG00000005508) #24 Trim42 (ENSJJAG00000019829) ENSJJAG00000020244 #22 Spsb4 (ENSJJAG00000020473) #23 Pxylp1 (ENSJJAG00000020595) Zbtb38 (ENSJJAG00000020897) Rasa2 (ENSJJAG00000021872) Gm28729 (ENSJJAG00000023069) ENSJJAG00000023206 ENSJJAG00000000084 Tfdp2 (ENSJJAG00000000515) Gk5 (ENSJJAG00000002736) Xrn1 (ENSJJAG00000010863) Atr (ENSJJAG00000015162) Pls1 (ENSJJAG00000017370) Trpc1 (ENSJJAG00000018439) Pcolce2 (ENSJJAG00000019087) ENSJJAG00000014039 Lesser Egyptian jerboa MODERN SPECIES 190 Fez1 (ENSJJAG00000019444) Pknox2 (ENSJJAG00000019019) Tmem218 (ENSJJAG00000018579) Slc37a2 (ENSJJAG00000015861) Hepacam (ENSJJAG00000015662) Robo4 (ENSJJAG00000019076) Robo3 (ENSJJAG00000012565) Msantd2 (ENSJJAG00000022389) Esam (ENSJJAG00000023863) Vsig2 (ENSJJAG00000023365) Nrgn (ENSJJAG00000023345) Spa17 (ENSJJAG00000022651) Siae (ENSJJAG00000020788) Tbrg1 (ENSJJAG00000020520) Panx3 (ENSJJAG00000020454) ENSJJAG00000019544 #22 ENSJJAG00000019340 Or8b8 (ENSJJAG00000014220) Or8b42 (ENSJJAG00000012000) ENSJJAG00000011808 ENSJJAG00000011560 ENSJJAG00000010890 Tmem225 (ENSJJAG00000006368) ENSJJAG00000012696 ENSJJAG00000003819 Or10d1 (ENSJJAG00000001467) ENSJJAG00000001018 ENSJJAG00000021921 ENSJJAG00000021829 ENSJJAG00000012345 ENSJJAG00000012327 Kangaroo rat MODERN SPECIES 443 Clstn2 (ENSDORG00000015895) #24 Trim42 (ENSDORG00000009003) Slc25a36 (ENSDORG00000011634) #22 Pxylp1 (ENSDORG00000009808) ENSDORG00000005705 Rasa2 (ENSDORG00000001995) Gm28729 (ENSDORG00000029603) ENSDORG00000025570 ENSDORG00000029879 ENSDORG00000023219 Gk5 (ENSDORG00000023582) Xrn1 (ENSDORG00000013833) Atr (ENSDORG00000000389) Pls1 (ENSDORG00000009841) Trpc1 (ENSDORG00000013958) Pcolce2 (ENSDORG00000013959) ENSDORG00000005201 Slc9a9 (ENSDORG00000011135) Rodentia_A ANCESTRAL SPECIES 5 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Hystricomorpha ANCESTRAL SPECIES 6 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Hystricomorpha_a DUPLICATION Hystricomorpha_a ANCESTRAL SPECIES 4 ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d.u #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Hystricomorpha_b ANCESTRAL SPECIES 45 ENSGT00390000003033 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d.u #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481 ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 215 MRPS22 (ENSCLAG00000001705) COPB2 (ENSCLAG00000001365) RBP2 (ENSCLAG00000002887) RBP1 (ENSCLAG00000001341) NMNAT3 (ENSCLAG00000001306) CLSTN2 (ENSCLAG00000001170) #24 TRIM42 (ENSCLAG00000001061) ENSCLAG00000001033 #22 SPSB4 (ENSCLAG00000000956) #23 PXYLP1 (ENSCLAG00000005226) ZBTB38 (ENSCLAG00000005110) RASA2 (ENSCLAG00000004874) ENSCLAG00000004716 ATP1B3 (ENSCLAG00000004199) TFDP2 (ENSCLAG00000003994) GK5 (ENSCLAG00000003833) XRN1 (ENSCLAG00000001451) ATR (ENSCLAG00000001152) PLS1 (ENSCLAG00000001023) TRPC1 (ENSCLAG00000003616) PCOLCE2 (ENSCLAG00000001585) PAQR9 (ENSCLAG00000017569) ENSCLAG00000001331 Long-tailed chinchilla MODERN SPECIES 128 ALDH1L1 (ENSCLAG00000005505) KLF15 (ENSCLAG00000010869) CFAP100 (ENSCLAG00000015844) ZXDC (ENSCLAG00000007278) UROC1 (ENSCLAG00000003335) CHST13 (ENSCLAG00000005485) ENSCLAG00000005993 ENSCLAG00000006235 ENSCLAG00000003147 ENSCLAG00000003596 NET1 (ENSCLAG00000003970) CALML3 (ENSCLAG00000006016) ASB13 (ENSCLAG00000006056) TASOR2 (ENSCLAG00000006738) GDI2 (ENSCLAG00000006137) ENSCLAG00000006473 #22 ANKRD16 (ENSCLAG00000006802) FBH1 (ENSCLAG00000008089) IL15RA (ENSCLAG00000009610) IL2RA (ENSCLAG00000017080) RBM17 (ENSCLAG00000012195) PFKFB3 (ENSCLAG00000003410) PRKCQ (ENSCLAG00000005924) ENSCLAG00000012960 ITIH5 (ENSCLAG00000013526) ITIH2 (ENSCLAG00000014958) ENSCLAG00000008690 ATP5F1C (ENSCLAG00000009245) ENSCLAG00000009624 GATA3 (ENSCLAG00000009680) CELF2 (ENSCLAG00000010311) Guinea pig MODERN SPECIES 8 ARMC8 (ENSCPOG00000008104) NME9 (ENSCPOG00000008114) MRAS (ENSCPOG00000034906) ESYT3 (ENSCPOG00000008125) CEP70 (ENSCPOG00000008134) FAIM (ENSCPOG00000019872) PIK3CB (ENSCPOG00000000884) ENSCPOG00000038087 MRPS22 (ENSCPOG00000034779) COPB2 (ENSCPOG00000014668) RBP2 (ENSCPOG00000004129) RBP1 (ENSCPOG00000033535) NMNAT3 (ENSCPOG00000034365) CLSTN2 (ENSCPOG00000003011) #24 TRIM42 (ENSCPOG00000012108) SLC25A36 (ENSCPOG00000019810) #22 SPSB4 (ENSCPOG00000033038) #23 PXYLP1 (ENSCPOG00000035466) ZBTB38 (ENSCPOG00000033797) RASA2 (ENSCPOG00000014013) ENSCPOG00000032259 RNF7 (ENSCPOG00000036031) GRK7 (ENSCPOG00000013262) ENSCPOG00000003739 TFDP2 (ENSCPOG00000013203) GK5 (ENSCPOG00000004732) ENSCPOG00000003458 ENSCPOG00000035199 ATR (ENSCPOG00000007001) PLS1 (ENSCPOG00000003196) TRPC1 (ENSCPOG00000003198) Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000154369.d.v #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000154369.d.v #22 Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 166 ENSCLAG00000004213 BIN1 (ENSCLAG00000003943) ERCC3 (ENSCLAG00000002965) MAP3K2 (ENSCLAG00000002850) PROC (ENSCLAG00000002690) IWS1 (ENSCLAG00000008232) MYO7B (ENSCLAG00000006979) GPR17 (ENSCLAG00000005855) LIMS2 (ENSCLAG00000005260) WDR33 (ENSCLAG00000005199) POLR2D (ENSCLAG00000004449) AMMECR1L (ENSCLAG00000004252) SAP130 (ENSCLAG00000002622) UGGT1 (ENSCLAG00000004844) HS6ST1 (ENSCLAG00000004326) ENSCLAG00000004147 #22 PLEKHB2 (ENSCLAG00000003807) FAM168B (ENSCLAG00000008876) SMIM39 (ENSCLAG00000009161) ENSCLAG00000008181 ENSCLAG00000003703 PTPN18 (ENSCLAG00000003389) IMP4 (ENSCLAG00000003199) CCDC115 (ENSCLAG00000003015) Long-tailed chinchilla MODERN SPECIES 122 BFSP1 (ENSCLAG00000013897) PCSK2 (ENSCLAG00000012372) OTOR (ENSCLAG00000016622) ENSCLAG00000014771 ENSCLAG00000012327 ENSCLAG00000010315 FLRT3 (ENSCLAG00000014984) MACROD2 (ENSCLAG00000014137) SEL1L2 (ENSCLAG00000014367) NDUFAF5 (ENSCLAG00000015585) ENSCLAG00000013266 ENSCLAG00000013154 ENSCLAG00000012594 TASP1 (ENSCLAG00000014601) ISM1 (ENSCLAG00000010948) ENSCLAG00000010570 #22 SPTLC3 (ENSCLAG00000010757) ENSCLAG00000015652 BTBD3 (ENSCLAG00000016652) JAG1 (ENSCLAG00000015718) SLX4IP (ENSCLAG00000013662) MKKS (ENSCLAG00000011755) SNAP25 (ENSCLAG00000013458) ANKEF1 (ENSCLAG00000012742) PAK5 (ENSCLAG00000011785) LAMP5 (ENSCLAG00000015136) PLCB4 (ENSCLAG00000010896) PLCB1 (ENSCLAG00000012974) TMX4 (ENSCLAG00000012074) HAO1 (ENSCLAG00000014360) BMP2 (ENSCLAG00000014626) Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 27 FOXL2 (ENSHGLG00000032272) ENSHGLG00000040288 PRR23C (ENSHGLG00000037355) ENSHGLG00000010873 COPB2 (ENSHGLG00000011244) RBP2 (ENSHGLG00000011738) ENSHGLG00000036615 ENSHGLG00000012202 #22 NMNAT3 (ENSHGLG00000012035) ENSHGLG00000012472 #24 ENSHGLG00000044512 ENSHGLG00000020964 ENSHGLG00000049519 ENSHGLG00000013325 ENSHGLG00000041508 ENSHGLG00000045813 #22 ENSHGLG00000021114 SPSB4 (ENSHGLG00000013816) #23 ENSHGLG00000014428 PXYLP1 (ENSHGLG00000014087) ZBTB38 (ENSHGLG00000011669) RASA2 (ENSHGLG00000012050) RNF7 (ENSHGLG00000038279) ENSHGLG00000033069 GRK7 (ENSHGLG00000012629) ENSHGLG00000012755 TFDP2 (ENSHGLG00000013441) ENSHGLG00000033455 GK5 (ENSHGLG00000014374) XRN1 (ENSHGLG00000014476) ATR (ENSHGLG00000016875) Naked mole-rat female MODERN SPECIES 24 DGAT2 (ENSHGLG00000003971) ENSHGLG00000039982 UVRAG (ENSHGLG00000003077) WNT11 (ENSHGLG00000010701) THAP12 (ENSHGLG00000043567) GVQW3 (ENSHGLG00000047967) EMSY (ENSHGLG00000006473) LRRC32 (ENSHGLG00000019111) ENSHGLG00000019386 ENSHGLG00000019448 ENSHGLG00000046732 ENSHGLG00000040669 ENSHGLG00000046387 ENSHGLG00000043666 ENSHGLG00000007972 ENSHGLG00000017959 #22 ACER3 (ENSHGLG00000010087) ENSHGLG00000037392 OMP (ENSHGLG00000046318) CAPN5 (ENSHGLG00000002816) MYO7A (ENSHGLG00000011345) GDPD4 (ENSHGLG00000003760) ENSHGLG00000019999 PAK1 (ENSHGLG00000046220) AQP11 (ENSHGLG00000003550) ENSHGLG00000002326 RSF1 (ENSHGLG00000002695) AAMDC (ENSHGLG00000003585) ENSHGLG00000005234 ENSHGLG00000019142 ENSHGLG00000041450 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 26 ENSHGLG00000029658 CCNG2 (ENSHGLG00000015913) CCNI (ENSHGLG00000015949) ENSHGLG00000015983 ENSHGLG00000013102 ENSHGLG00000013314 ENSHGLG00000042382 ENSHGLG00000013496 CCDC158 (ENSHGLG00000013896) ENSHGLG00000049041 ENSHGLG00000017769 ENSHGLG00000043503 SCARB2 (ENSHGLG00000017432) NUP54 (ENSHGLG00000017448) CXCL11 (ENSHGLG00000016538) ENSHGLG00000041661 #22 ART3 (ENSHGLG00000017461) ENSHGLG00000016552 ENSHGLG00000016573 ENSHGLG00000050712 ENSHGLG00000016586 ENSHGLG00000019105 ENSHGLG00000018847 ENSHGLG00000017614 ENSHGLG00000041551 ENSHGLG00000015456 ENSHGLG00000014031 ENSHGLG00000013831 ENSHGLG00000008738 ENSHGLG00000044534 ENSHGLG00000015484 Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000010289 ENSHGLG00000050979 FABP1 (ENSHGLG00000050149) SMYD1 (ENSHGLG00000050629) ENSHGLG00000042877 ENSHGLG00000037617 ENSHGLG00000038505 ENSHGLG00000004771 ENSHGLG00000048608 ENSHGLG00000033472 RMND5A (ENSHGLG00000034710) RNF103 (ENSHGLG00000006072) ENSHGLG00000020192 CHMP3 (ENSHGLG00000007476) KDM3A (ENSHGLG00000008133) ENSHGLG00000009499 #22 REEP1 (ENSHGLG00000033995) MRPL35 (ENSHGLG00000042289) ENSHGLG00000049882 IMMT (ENSHGLG00000004647) PTCD3 (ENSHGLG00000007937) ENSHGLG00000006334 ENSHGLG00000050264 ST3GAL5 (ENSHGLG00000015817) ATOH8 (ENSHGLG00000013394) ENSHGLG00000033431 SFTPB (ENSHGLG00000016430) USP39 (ENSHGLG00000015846) C2orf68 (ENSHGLG00000036696) TMEM150A (ENSHGLG00000010994) RNF181 (ENSHGLG00000045564) Sciuridae ANCESTRAL SPECIES 26 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772 ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481.n ENSGT00940000160511 ENSGT01030000234579.A.b ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Marmotini ANCESTRAL SPECIES 25 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.l ENSGT00390000007772.k ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481.n ENSGT00940000160511 ENSGT01030000234579.A.b.p ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Alpin marmot MODERN SPECIES 19 NME9 (ENSMMMG00000017916) MRAS (ENSMMMG00000017903) ESYT3 (ENSMMMG00000017877) CEP70 (ENSMMMG00000017837) FAIM (ENSMMMG00000017805) PIK3CB (ENSMMMG00000017795) ENSMMMG00000017792 ENSMMMG00000017780 MRPS22 (ENSMMMG00000017768) COPB2 (ENSMMMG00000017742) RBP2 (ENSMMMG00000017732) RBP1 (ENSMMMG00000017717) NMNAT3 (ENSMMMG00000017702) CLSTN2 (ENSMMMG00000017668) #24 TRIM42 (ENSMMMG00000017638) SLC25A36 (ENSMMMG00000017615) #22 ENSMMMG00000017610 #23 PXYLP1 (ENSMMMG00000017602) ENSMMMG00000017581 RASA2 (ENSMMMG00000017563) ENSMMMG00000017545 RNF7 (ENSMMMG00000017538) ENSMMMG00000017532 TFDP2 (ENSMMMG00000017474) GK5 (ENSMMMG00000017449) ENSMMMG00000017439 XRN1 (ENSMMMG00000017320) ENSMMMG00000017314 ATR (ENSMMMG00000017237) PLS1 (ENSMMMG00000017219) TRPC1 (ENSMMMG00000017198) Marmotini_b ANCESTRAL SPECIES 46 ENSGT00940000162486 ENSGT00940000156353 ENSGT00940000161072 ENSGT00390000009029 ENSGT00390000007364 ENSGT00940000157522 ENSGT00940000162075 ENSGT00390000007772.k ENSGT00390000006095 ENSGT00900000141083.d ENSGT00940000160165 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b #24 ENSGT00530000064220 ENSGT00940000154369.d #22 ENSGT01030000234629.C #23 ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00530000068221 ENSGT00940000155481.n ENSGT00940000160511 ENSGT01030000234579.A.b.p ENSGT00940000157909.j ENSGT01000000214434.A ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 Arctic ground squirrel MODERN SPECIES 35 ESYT3 (ENSUPAG00010007626) CEP70 (ENSUPAG00010007665) FAIM (ENSUPAG00010007724) PIK3CB (ENSUPAG00010007758) FOXL2 (ENSUPAG00010007800) ENSUPAG00010007805 ENSUPAG00010007807 MRPS22 (ENSUPAG00010007811) COPB2 (ENSUPAG00010007828) RBP2 (ENSUPAG00010007849) RBP1 (ENSUPAG00010007876) NMNAT3 (ENSUPAG00010007888) CLSTN2 (ENSUPAG00010007944) #24 TRIM42 (ENSUPAG00010007998) ENSUPAG00010008012 SLC25A36 (ENSUPAG00010008022) #22 SPSB4 (ENSUPAG00010008032) #23 PXYLP1 (ENSUPAG00010008036) ZBTB38 (ENSUPAG00010008043) RASA2 (ENSUPAG00010008044) ENSUPAG00010008087 ENSUPAG00010008104 GRK7 (ENSUPAG00010008111) ATP1B3 (ENSUPAG00010008116) TFDP2 (ENSUPAG00010008140) GK5 (ENSUPAG00010008189) XRN1 (ENSUPAG00010008232) ATR (ENSUPAG00010008391) PLS1 (ENSUPAG00010008455) TRPC1 (ENSUPAG00010008473) PCOLCE2 (ENSUPAG00010008520) Squirrel MODERN SPECIES 140 ESYT3 (ENSSTOG00000012541) ENSSTOG00000034283 FAIM (ENSSTOG00000001255) ENSSTOG00000022812 PIK3CB (ENSSTOG00000001257) FOXL2 (ENSSTOG00000026426) MRPS22 (ENSSTOG00000014224) ENSSTOG00000024304 COPB2 (ENSSTOG00000014231) RBP2 (ENSSTOG00000027268) RBP1 (ENSSTOG00000005673) NMNAT3 (ENSSTOG00000005679) CLSTN2 (ENSSTOG00000002012) #24 TRIM42 (ENSSTOG00000020710) ENSSTOG00000025591 SLC25A36 (ENSSTOG00000022588) #22 SPSB4 (ENSSTOG00000024795) #23 PXYLP1 (ENSSTOG00000024318) ZBTB38 (ENSSTOG00000025333) RASA2 (ENSSTOG00000010098) ENSSTOG00000031767 RNF7 (ENSSTOG00000014964) Grk7 (ENSSTOG00000021157) ENSSTOG00000013235 TFDP2 (ENSSTOG00000013241) GK5 (ENSSTOG00000013540) XRN1 (ENSSTOG00000013552) ATR (ENSSTOG00000021792) ENSSTOG00000034418 PLS1 (ENSSTOG00000009305) TRPC1 (ENSSTOG00000024889) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 17 ENSSVLG00005007667 LIF (ENSSVLG00005007682) OSM (ENSSVLG00005007718) CASTOR1 (ENSSVLG00005007779) TBC1D10A (ENSSVLG00005007816) SF3A1 (ENSSVLG00005007864) ENSSVLG00005007897 ENSSVLG00005007919 RNF215 (ENSSVLG00005007941) SEC14L2 (ENSSVLG00005008012) MTFP1 (ENSSVLG00005008139) SEC14L3 (ENSSVLG00005008199) SEC14L4 (ENSSVLG00005008388) SEC14L6 (ENSSVLG00005008512) ENSSVLG00005008578 ENSSVLG00005008599 #22 GAL3ST1 (ENSSVLG00005008641) PES1 (ENSSVLG00005008673) TCN2 (ENSSVLG00005008715) SLC35E4 (ENSSVLG00005008774) ENSSVLG00005008790 C5orf52 (ENSSVLG00005008815) OSBP2 (ENSSVLG00005008927) MORC2 (ENSSVLG00005009391) ENSSVLG00005009558 SMTN (ENSSVLG00005009610) SELENOM (ENSSVLG00005009730) INPP5J (ENSSVLG00005009829) PLA2G3 (ENSSVLG00005010180) RNF185 (ENSSVLG00005010368) LIMK2 (ENSSVLG00005010456) Eurasian red squirrel MODERN SPECIES 3 ENSSVLG00005020500 NTPCR (ENSSVLG00005020544) ENSSVLG00005020618 ENSSVLG00005020659 ENSSVLG00005020688 ENSSVLG00005020717 ENSSVLG00005020751 ENSSVLG00005020782 ENSSVLG00005020823 ENSSVLG00005020855 ENSSVLG00005020890 ENSSVLG00005020924 ENSSVLG00005020973 ENSSVLG00005020985 ENSSVLG00005021014 ENSSVLG00005021055 #22 ENSSVLG00005021066 ENSSVLG00005021091 ENSSVLG00005021128 ENSSVLG00005021177 ENSSVLG00005021226 ENSSVLG00005021275 ENSSVLG00005021299 ENSSVLG00005021338 ENSSVLG00005021359 FZD8 (ENSSVLG00005021417) GJD4 (ENSSVLG00005021504) CCNY (ENSSVLG00005021552) ENSSVLG00005021670 ENSSVLG00005021688 CREM (ENSSVLG00005021874) Sauria ANCESTRAL SPECIES 9 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000159217 ENSGT00730000111282 ENSGT00940000156796.k.a.b ENSGT00940000156342 ENSGT00940000161398 Archelosauria ANCESTRAL SPECIES 11 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000159217 ENSGT00730000111282 ENSGT00940000156796.k.a.b ENSGT00940000156342 ENSGT00940000161398 Archosauria ANCESTRAL SPECIES 10 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 ENSGT00390000004360.a.b.b ENSGT00950000183115.a Aves ANCESTRAL SPECIES 13 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 ENSGT00390000004360.a.b.b ENSGT00950000183115.a Neognathae ANCESTRAL SPECIES 9 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00530000067525 ENSGT00940000158980 ENSGT00940000158370 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 Galloanserae ANCESTRAL SPECIES 16 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00530000067525 ENSGT00940000158370 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 ENSGT00390000004360.a.b.b Anatidae ANCESTRAL SPECIES 40 ENSGT00940000155066 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 ENSGT00390000004360.a.b.b ENSGT00950000183115.a ENSGT01040000240444.A.b.b Pink-footed goose MODERN SPECIES 102 SLC25A36 (ENSABRG00000007700) #22 ENSABRG00000007688 ##23 TRIM42 (ENSABRG00000007666) CLSTN2 (ENSABRG00000007646) #24 NMNAT3 (ENSABRG00000007625) RBP1 (ENSABRG00000007622) RBP2 (ENSABRG00000007617) COPB2 (ENSABRG00000007599) MRPS22 (ENSABRG00000007587) PIK3CB (ENSABRG00000007550) ENSABRG00000007534 PER2 (ENSABRG00000007500) ENSABRG00000007496 CAB39 (ENSABRG00000007491) ITM2C (ENSABRG00000007488) ENSABRG00000007481 Duck MODERN SPECIES 27 ENSAPLG00000008050 CUL3 (ENSAPLG00000008361) SERPINE2 (ENSAPLG00000008646) AP1S3 (ENSAPLG00000009698) SCG2 (ENSAPLG00000001800) WDFY1 (ENSAPLG00000009281) KCNE4 (ENSAPLG00000001808) ACSL3 (ENSAPLG00000009888) MOGAT1 (ENSAPLG00000010112) FARSB (ENSAPLG00000010292) SGPP2 (ENSAPLG00000010903) PAX3 (ENSAPLG00000011062) ENSAPLG00000026154 EPHA4 (ENSAPLG00000009611) PXYLP1 (ENSAPLG00000004284) SLC25A36 (ENSAPLG00000025953) #22 ENSAPLG00000021209 ENSAPLG00000009878 ##23 TRIM42 (ENSAPLG00000004454) CLSTN2 (ENSAPLG00000004577) #24 ENSAPLG00000002699 RBP1 (ENSAPLG00000002750) RBP2 (ENSAPLG00000002772) COPB2 (ENSAPLG00000002884) MRPS22 (ENSAPLG00000003534) PIK3CB (ENSAPLG00000003554) ENSAPLG00000004255 PER2 (ENSAPLG00000004326) HES6 (ENSAPLG00000020110) ENSAPLG00000005097 CAB39 (ENSAPLG00000005148) Phasianidae ANCESTRAL SPECIES 9 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b.c #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00530000067525 ENSGT00940000158370 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 ENSGT00390000004360.a.b.b Japanese quail MODERN SPECIES 27 FAM124B (ENSCJPG00005005807) SERPINE2 (ENSCJPG00005005800) WDFY1 (ENSCJPG00005005798) AP1S3 (ENSCJPG00005005795) KCNE4 (ENSCJPG00005005790) ACSL3 (ENSCJPG00005005784) MOGAT1 (ENSCJPG00005005782) FARSB (ENSCJPG00005005780) SGPP2 (ENSCJPG00005005778) ENSCJPG00005005776 PAX3 (ENSCJPG00005005775) ENSCJPG00005005774 EPHA4 (ENSCJPG00005005771) ENSCJPG00005005764 PXYLP1 (ENSCJPG00005005759) SLC25A36 (ENSCJPG00005005758) #22 ENSCJPG00005005756 ##23 TRIM42 (ENSCJPG00005005755) CLSTN2 (ENSCJPG00005005748) #24 NMNAT3 (ENSCJPG00005005694) RBP1 (ENSCJPG00005005691) RBP2 (ENSCJPG00005005688) COPB2 (ENSCJPG00005005687) MRPS22 (ENSCJPG00005005683) PIK3CB (ENSCJPG00005005633) ENSCJPG00005005629 ENSCJPG00005005627 PER2 (ENSCJPG00005005589) HES6 (ENSCJPG00005005585) ENSCJPG00005005581 CAB39 (ENSCJPG00005005578) Phasianidae_b ANCESTRAL SPECIES 12 ENSGT00940000155066 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b.c #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 ENSGT00390000004360.a.b.b ENSGT00950000183115.a Chicken MODERN SPECIES 38 FAM124B (ENSGALG00010025990) SERPINE2 (ENSGALG00010025982) WDFY1 (ENSGALG00010026704) AP1S3 (ENSGALG00010025932) SCG2 (ENSGALG00010025890) KCNE4 (ENSGALG00010025787) ACSL3 (ENSGALG00010025705) MOGAT1 (ENSGALG00010023597) FARSB (ENSGALG00010023588) SGPP2 (ENSGALG00010023552) PAX3 (ENSGALG00010025378) ENSGALG00010025367 EPHA4 (ENSGALG00010025364) ENSGALG00010025354 PXYLP1 (ENSGALG00010025346) SLC25A36 (ENSGALG00010025316) #22 SPSB2 (ENSGALG00010025297) ##23 TRIM42 (ENSGALG00010025265) CLSTN2 (ENSGALG00010025242) #24 NMNAT3 (ENSGALG00010026692) RBP1 (ENSGALG00010025172) RBP2 (ENSGALG00010025169) COPB2 (ENSGALG00010025139) MRPS22 (ENSGALG00010025160) FOXL2 (ENSGALG00010026018) PIK3CB (ENSGALG00010025125) VAMP2 (ENSGALG00010025072) PER2 (ENSGALG00010025047) HES6 (ENSGALG00010025028) HES6 (ENSGALG00010024997) CAB39 (ENSGALG00010024970) Turkey MODERN SPECIES 2 ENSMGAG00000022745 ENSMGAG00000021375 ENSMGAG00000020127 ENSMGAG00000004187 ENSMGAG00000004286 ENSMGAG00000018100 ENSMGAG00000020979 FOXL2 (ENSMGAG00000019126) NMNAT3 (ENSMGAG00000004458) ENSMGAG00000004383 ENSMGAG00000004374 ENSMGAG00000016811 #24 ENSMGAG00000004493 #24 ENSMGAG00000004566 ENSMGAG00000004584 ##23 ENSMGAG00000004589 #22 ENSMGAG00000021733 ENSMGAG00000004596 ENSMGAG00000019250 ENSMGAG00000004608 ENSMGAG00000019363 ENSMGAG00000017564 ENSMGAG00000004670 ENSMGAG00000004653 MOGAT1 (ENSMGAG00000004817) ENSMGAG00000004828 ENSMGAG00000004870 ENSMGAG00000021429 ENSMGAG00000015990 ENSMGAG00000004875 ENSMGAG00000004891 Neognathae_b ANCESTRAL SPECIES 11 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00530000067525 ENSGT00940000158980 ENSGT00940000158370 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 Passeriformes ANCESTRAL SPECIES 9 ENSGT00940000155066 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00940000153518.d.a ENSGT01100000263537.b.a.a.b.a ENSGT00940000166878 ENSGT00940000157247 ENSGT00720000108834 ENSGT00940000154505.B ENSGT00940000159041 ENSGT00950000182887.C.b.a ENSGT00940000175729 ENSGT00940000153936.a ENSGT00940000156202.a ENSGT00950000182944.B.b ENSGT01030000234571.b.b.a.a.a ENSGT00390000008993 ENSGT00990000203615.b.a.b Passeriformes_d ANCESTRAL SPECIES 10 ENSGT00940000155066 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00940000153518.d.a ENSGT01100000263537.b.a.a.b.a ENSGT00940000166878 ENSGT00940000157247 ENSGT00720000108834 ENSGT00940000154505.B ENSGT00940000159041 ENSGT00950000182887.C.b.a ENSGT00940000175729 ENSGT00940000153936.a ENSGT00940000156202.a ENSGT00950000182944.B.b ENSGT01030000234571.b.b.a.a.a ENSGT00390000008993 ENSGT00990000203615.b.a.b Passeriformes_g ANCESTRAL SPECIES 11 ENSGT00940000155066 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00940000153518.d.a ENSGT01100000263537.b.a.a.b.a ENSGT00940000166878 ENSGT00940000157247 ENSGT00720000108834 ENSGT00940000154505.B ENSGT00940000159041 ENSGT00950000182887.C.b.a ENSGT00940000175729 ENSGT00940000153936.a ENSGT00940000156202.a ENSGT00950000182944.B.b ENSGT01030000234571.b.b.a.a.a ENSGT00390000008993 ENSGT00940000156108 Passeroidea ANCESTRAL SPECIES 13 ENSGT00940000155066 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00940000153518.d.a ENSGT01100000263537.b.a.a.b.a ENSGT00940000166878 ENSGT00940000157247 ENSGT00720000108834 ENSGT00940000154505.B ENSGT00940000159041 ENSGT00950000182887.C.b.a ENSGT00940000175729 ENSGT00940000153936.a ENSGT00940000156202.a ENSGT00950000182944.B.b ENSGT01030000234571.b.b.a.a.a ENSGT00390000008993 ENSGT00990000203615.b.a.b Common canary MODERN SPECIES 10 CUL3 (ENSSCAG00000002602) FAM124B (ENSSCAG00000002606) SERPINE2 (ENSSCAG00000002609) WDFY1 (ENSSCAG00000002625) AP1S3 (ENSSCAG00000002691) SCG2 (ENSSCAG00000002699) KCNE4 (ENSSCAG00000002705) ACSL3 (ENSSCAG00000002711) MOGAT1 (ENSSCAG00000002733) FARSB (ENSSCAG00000002780) SGPP2 (ENSSCAG00000002994) PAX3 (ENSSCAG00000003019) ENSSCAG00000003032 EPHA4 (ENSSCAG00000003040) PXYLP1 (ENSSCAG00000003054) SLC25A36 (ENSSCAG00000003059) #22 ENSSCAG00000003069 ##23 ENSSCAG00000003079 LIMS2 (ENSSCAG00000003083) GPR17 (ENSSCAG00000003090) ENSSCAG00000003094 MYO7B (ENSSCAG00000003107) IWS1 (ENSSCAG00000003130) PROC (ENSSCAG00000003139) DGKD (ENSSCAG00000003157) SAG (ENSSCAG00000003184) ATG16L1 (ENSSCAG00000003190) INPP5D (ENSSCAG00000003212) NEU2 (ENSSCAG00000003223) NGEF (ENSSCAG00000003231) SNORC (ENSSCAG00000003236) Zebra finch MODERN SPECIES 31 CUL3 (ENSTGUG00000007980) FAM124B (ENSTGUG00000029286) SERPINE2 (ENSTGUG00000007943) WDFY1 (ENSTGUG00000007912) AP1S3 (ENSTGUG00000007904) SCG2 (ENSTGUG00000007900) KCNE4 (ENSTGUG00000023353) ACSL3 (ENSTGUG00000007845) MOGAT1 (ENSTGUG00000007842) FARSB (ENSTGUG00000007788) SGPP2 (ENSTGUG00000007779) PAX3 (ENSTGUG00000007761) ENSTGUG00000021930 EPHA4 (ENSTGUG00000007665) PXYLP1 (ENSTGUG00000007659) SLC25A36 (ENSTGUG00000007651) #22 ENSTGUG00000007647 ##23 ENSTGUG00000025554 ENSTGUG00000022271 ENSTGUG00000029358 ENSTGUG00000023783 ENSTGUG00000020553 ENSTGUG00000029165 ENSTGUG00000029447 ENSTGUG00000025371 ENSTGUG00000027398 ENSTGUG00000024381 GPR17 (ENSTGUG00000007646) MYO7B (ENSTGUG00000007532) IWS1 (ENSTGUG00000007520) LIMS2 (ENSTGUG00000007623) Medium ground finch MODERN SPECIES 199 EPHA4 (ENSGFOG00000014205) PXYLP1 (ENSGFOG00000014207) SLC25A36 (ENSGFOG00000014209) #22 ENSGFOG00000014211 ##23 Flycatcher MODERN SPECIES 28 CUL3 (ENSFALG00000006780) FAM124B (ENSFALG00000006778) SERPINE2 (ENSFALG00000006776) WDFY1 (ENSFALG00000026942) AP1S3 (ENSFALG00000028533) SCG2 (ENSFALG00000006760) KCNE4 (ENSFALG00000015211) ACSL3 (ENSFALG00000006757) MOGAT1 (ENSFALG00000023623) FARSB (ENSFALG00000006739) SGPP2 (ENSFALG00000026365) PAX3 (ENSFALG00000006722) ENSFALG00000023049 EPHA4 (ENSFALG00000006700) ENSFALG00000006686 ENSFALG00000006675 #22 ENSFALG00000006668 ##23 LIMS2 (ENSFALG00000013584) ENSFALG00000013579 IWS1 (ENSFALG00000013574) ENSFALG00000028243 DGKD (ENSFALG00000013560) SAG (ENSFALG00000026069) ATG16L1 (ENSFALG00000013524) INPP5D (ENSFALG00000013517) SNORC (ENSFALG00000013501) NGEF (ENSFALG00000013507) KCNJ13 (ENSFALG00000026278) GIGYF2 (ENSFALG00000013495) EFHD1 (ENSFALG00000010489) ENSFALG00000013490 Great tit MODERN SPECIES 29 FAM124B (ENSPMJG00000017198) SERPINE2 (ENSPMJG00000017197) WDFY1 (ENSPMJG00000017196) AP1S3 (ENSPMJG00000017195) SCG2 (ENSPMJG00000017194) KCNE4 (ENSPMJG00000017192) ACSL3 (ENSPMJG00000017191) MOGAT1 (ENSPMJG00000017190) FARSB (ENSPMJG00000017151) SGPP2 (ENSPMJG00000017148) PAX3 (ENSPMJG00000017147) ENSPMJG00000017144 EPHA4 (ENSPMJG00000017141) ENSPMJG00000017139 PXYLP1 (ENSPMJG00000017127) SLC25A36 (ENSPMJG00000017124) #22 ENSPMJG00000017122 ##23 GPR17 (ENSPMJG00000017121) LIMS2 (ENSPMJG00000017119) MYO7B (ENSPMJG00000017117) IWS1 (ENSPMJG00000017115) PROC (ENSPMJG00000017111) DGKD (ENSPMJG00000017102) SAG (ENSPMJG00000017101) ATG16L1 (ENSPMJG00000017098) INPP5D (ENSPMJG00000017097) NEU2 (ENSPMJG00000017096) NGEF (ENSPMJG00000017095) SNORC (ENSPMJG00000017094) KCNJ13 (ENSPMJG00000017093) GIGYF2 (ENSPMJG00000017090) Neognathae_c ANCESTRAL SPECIES 13 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 ENSGT00390000004360.a.b.b ENSGT00950000183115.a Kakapo MODERN SPECIES 25 BTBD8 (ENSSHBG00005006173) C1orf146 (ENSSHBG00005006211) GLMN (ENSSHBG00005006260) RPAP2 (ENSSHBG00005006361) GFI1 (ENSSHBG00005006385) EVI5 (ENSSHBG00005006419) RPL5 (ENSSHBG00005006441) DIPK1A (ENSSHBG00005006475) MTF2 (ENSSHBG00005006490) TMED5 (ENSSHBG00005006506) CCDC18 (ENSSHBG00005006585) ENSSHBG00005006839 DR1 (ENSSHBG00005006857) FNBP1L (ENSSHBG00005006896) BCAR3 (ENSSHBG00005006986) SLC25A36 (ENSSHBG00005007014) #22 ENSSHBG00005007033 ##23 TRIM42 (ENSSHBG00005007054) CLSTN2 (ENSSHBG00005007183) #24 NMNAT3 (ENSSHBG00005007222) RBP1 (ENSSHBG00005007232) RBP2 (ENSSHBG00005007248) COPB2 (ENSSHBG00005007264) MRPS22 (ENSSHBG00005007308) FOXL2 (ENSSHBG00005007319) PIK3CB (ENSSHBG00005007477) ENSSHBG00005007848 PER2 (ENSSHBG00005007954) HES6 (ENSSHBG00005008658) ENSSHBG00005008662 CAB39 (ENSSHBG00005008666) Golden eagle MODERN SPECIES 1 FAM124B (ENSACCG00020007051) SERPINE2 (ENSACCG00020007080) WDFY1 (ENSACCG00020007105) ENSACCG00020007119 ENSACCG00020007126 SCG2 (ENSACCG00020005068) KCNE4 (ENSACCG00020005072) ACSL3 (ENSACCG00020005082) MOGAT1 (ENSACCG00020005091) FARSB (ENSACCG00020005096) SGPP2 (ENSACCG00020005110) PAX3 (ENSACCG00020005131) ENSACCG00020005157 EPHA4 (ENSACCG00020005170) PXYLP1 (ENSACCG00020005184) SLC25A36 (ENSACCG00020005189) #22 ENSACCG00020005199 ##23 TRIM42 (ENSACCG00020005220) CLSTN2 (ENSACCG00020005238) #24 NMNAT3 (ENSACCG00020005249) RBP1 (ENSACCG00020005256) RBP2 (ENSACCG00020005269) COPB2 (ENSACCG00020005277) MRPS22 (ENSACCG00020005295) FOXL2 (ENSACCG00020005312) PIK3CB (ENSACCG00020005323) ENSACCG00020005349 PER2 (ENSACCG00020005365) HES6 (ENSACCG00020005395) ENSACCG00020005406 CAB39 (ENSACCG00020005422) African ostrich MODERN SPECIES 574 PAX3 (ENSSCUG00000012144) ENSSCUG00000012148 EPHA4 (ENSSCUG00000012153) PXYLP1 (ENSSCUG00000012172) SLC25A36 (ENSSCUG00000012178) #22 ENSSCUG00000012180 ##23 TRIM42 (ENSSCUG00000012183) CLSTN2 (ENSSCUG00000012194) #24 NMNAT3 (ENSSCUG00000012203) RBP1 (ENSSCUG00000012204) RBP2 (ENSSCUG00000012206) COPB2 (ENSSCUG00000012209) MRPS22 (ENSSCUG00000012212) PIK3CB (ENSSCUG00000012221) VAMP2 (ENSSCUG00000012229) PER2 (ENSSCUG00000012234) ENSSCUG00000012243 CAB39 (ENSSCUG00000012244) ITM2C (ENSSCUG00000012247) ENSSCUG00000012248 Australian saltwater crocodile MODERN SPECIES 30 SERPINE2 (ENSCPRG00005004494) WDFY1 (ENSCPRG00005004500) AP1S3 (ENSCPRG00005004514) SCG2 (ENSCPRG00005004524) KCNE4 (ENSCPRG00005004528) ACSL3 (ENSCPRG00005004534) ENSCPRG00005004541 ENSCPRG00005004549 MOGAT1 (ENSCPRG00005004550) FARSB (ENSCPRG00005004555) SGPP2 (ENSCPRG00005004586) PAX3 (ENSCPRG00005004603) ENSCPRG00005004614 EPHA4 (ENSCPRG00005004622) PXYLP1 (ENSCPRG00005004643) SLC25A36 (ENSCPRG00005004653) #22 ENSCPRG00005004663 ##23 ENSCPRG00005004666 TRIM42 (ENSCPRG00005004672) CLSTN2 (ENSCPRG00005004695) #24 NMNAT3 (ENSCPRG00005004704) RBP1 (ENSCPRG00005004706) RBP2 (ENSCPRG00005004717) COPB2 (ENSCPRG00005004722) MRPS22 (ENSCPRG00005004730) PIK3CB (ENSCPRG00005004745) ENSCPRG00005004754 PER2 (ENSCPRG00005004773) CAB39 (ENSCPRG00005004789) TBCCD1 (ENSCPRG00005004793) DNAJB11 (ENSCPRG00005004800) Cryptodira ANCESTRAL SPECIES 16 ENSGT00940000155066 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000159217 ENSGT00730000111282 ENSGT00940000156796.k.a.b ENSGT00940000156342 ENSGT00940000161398 Testudinoidea ANCESTRAL SPECIES 9 ENSGT00940000155066 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b.d ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 ENSGT00390000004360.a.b.b ENSGT00950000183115.a Testudinidae ANCESTRAL SPECIES 7 ENSGT00940000155066 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b.d ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000156342 ENSGT00940000161398 ENSGT00390000004360.a.b.b ENSGT00950000183115.a ENSGT01040000240444.A.b.b Goode s thornscrub tortoise MODERN SPECIES 23 FAM124B (ENSGEVG00005016543) SERPINE2 (ENSGEVG00005016569) WDFY1 (ENSGEVG00005016657) AP1S3 (ENSGEVG00005016701) SCG2 (ENSGEVG00005016731) KCNE4 (ENSGEVG00005016754) ACSL3 (ENSGEVG00005016782) MOGAT1 (ENSGEVG00005016871) FARSB (ENSGEVG00005017015) SGPP2 (ENSGEVG00005017114) PAX3 (ENSGEVG00005017224) ENSGEVG00005017559 ENSGEVG00005017628 EPHA4 (ENSGEVG00005017645) PXYLP1 (ENSGEVG00005017771) SLC25A36 (ENSGEVG00005017843) #22 ENSGEVG00005017927 ##23 TRIM42 (ENSGEVG00005017959) CLSTN2 (ENSGEVG00005018072) #24 NMNAT3 (ENSGEVG00005018195) RBP1 (ENSGEVG00005018209) RBP2 (ENSGEVG00005018221) COPB2 (ENSGEVG00005018260) MRPS22 (ENSGEVG00005018314) FOXL2 (ENSGEVG00005018340) PIK3CB (ENSGEVG00005018356) ENSGEVG00005018395 PER2 (ENSGEVG00005018424) HES6 (ENSGEVG00005018447) CAB39 (ENSGEVG00005018464) ITM2C (ENSGEVG00005018476) Abingdon island giant tortoise MODERN SPECIES 2844 PXYLP1 (ENSCABG00000022320) SLC25A36 (ENSCABG00000022319) #22 ENSCABG00000022315 ##23 Emydidae ANCESTRAL SPECIES 3 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b.c ENSGT00970000193372.b.d ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00390000014827 ENSGT00940000158980 ENSGT00940000158370 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 ENSGT00390000004360.a.b.b painted turtle MODERN SPECIES 2434 FAM124B (ENSCPBG00000019375) SERPINE2 (ENSCPBG00000019374) WDFY1 (ENSCPBG00000019370) ENSCPBG00000019368 ENSCPBG00000019367 SCG2 (ENSCPBG00000019366) KCNE4 (ENSCPBG00000019365) ACSL3 (ENSCPBG00000019360) MOGAT1 (ENSCPBG00000019353) FARSB (ENSCPBG00000019346) SGPP2 (ENSCPBG00000019345) PAX3 (ENSCPBG00000019341) ENSCPBG00000019339 EPHA4 (ENSCPBG00000019328) ENSCPBG00000019320 SLC25A36 (ENSCPBG00000019317) #22 ENSCPBG00000019314 ##23 TRIM42 (ENSCPBG00000019276) CLSTN2 (ENSCPBG00000019275) #24 NMNAT3 (ENSCPBG00000019274) COPB2 (ENSCPBG00000019270) MRPS22 (ENSCPBG00000019266) FOXL2 (ENSCPBG00000019264) PIK3CB (ENSCPBG00000019258) ENSCPBG00000019253 PER2 (ENSCPBG00000019251) HES6 (ENSCPBG00000019247) ENSCPBG00000019245 CAB39 (ENSCPBG00000019243) ENSCPBG00000019241 ITM2C (ENSCPBG00000019239) Three-toed box turtle MODERN SPECIES 32 CUL3 (ENSTMTG00000014940) FAM124B (ENSTMTG00000014914) SERPINE2 (ENSTMTG00000014900) WDFY1 (ENSTMTG00000014887) AP1S3 (ENSTMTG00000014876) SCG2 (ENSTMTG00000014865) KCNE4 (ENSTMTG00000014859) ACSL3 (ENSTMTG00000014822) MOGAT1 (ENSTMTG00000014800) FARSB (ENSTMTG00000014771) SGPP2 (ENSTMTG00000014737) PAX3 (ENSTMTG00000014721) ENSTMTG00000014711 EPHA4 (ENSTMTG00000014666) PXYLP1 (ENSTMTG00000014648) SLC25A36 (ENSTMTG00000014593) #22 ENSTMTG00000014582 ENSTMTG00000014570 ##23 TRIM42 (ENSTMTG00000014485) CLSTN2 (ENSTMTG00000014354) #24 NMNAT3 (ENSTMTG00000014326) RBP2 (ENSTMTG00000014304) COPB2 (ENSTMTG00000014241) MRPS22 (ENSTMTG00000014213) FOXL2 (ENSTMTG00000014207) PIK3CB (ENSTMTG00000014166) VAMP3 (ENSTMTG00000014154) ENSTMTG00000014143 ENSTMTG00000014115 HES6 (ENSTMTG00000014101) ENSTMTG00000014085 Chinese turtle MODERN SPECIES 2015 ENSPSIG00000000807 KCNE4 (ENSPSIG00000000798) ACSL3 (ENSPSIG00000004390) MOGAT1 (ENSPSIG00000004347) FARSB (ENSPSIG00000006248) SGPP2 (ENSPSIG00000006129) PAX3 (ENSPSIG00000005535) EPHA4 (ENSPSIG00000004922) PXYLP1 (ENSPSIG00000004901) ENSPSIG00000000789 ENSPSIG00000000778 SLC25A36 (ENSPSIG00000004696) #22 ENSPSIG00000004670 ##23 TRIM42 (ENSPSIG00000004519) Lepidosauria ANCESTRAL SPECIES 12 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00390000013732 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000159217 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 tuatara MODERN SPECIES 305 SLC25A36 (ENSSPUG00000000437) #22 Episquamata ANCESTRAL SPECIES 2 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00390000013732 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000159217 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 Laterata ANCESTRAL SPECIES ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000175758 ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00390000013732 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 ENSGT00390000004360.a.b.b ENSGT00950000183115.a Argentine black and white tegu MODERN SPECIES 19 SERPINE2 (ENSSMRG00000002329) WDFY1 (ENSSMRG00000002326) AP1S3 (ENSSMRG00000002321) SCG2 (ENSSMRG00000002298) KCNE4 (ENSSMRG00000002277) ACSL3 (ENSSMRG00000002269) MOGAT1 (ENSSMRG00000002254) FARSB (ENSSMRG00000002235) SGPP2 (ENSSMRG00000002228) ENSSMRG00000002225 PAX3 (ENSSMRG00000002224) ENSSMRG00000002218 EPHA4 (ENSSMRG00000002197) ENSSMRG00000002183 PXYLP1 (ENSSMRG00000002178) SLC25A36 (ENSSMRG00000002163) #22 ENSSMRG00000002148 ##23 ENSSMRG00000002005 TRIM42 (ENSSMRG00000001885) CLSTN2 (ENSSMRG00000001834) #24 ENSSMRG00000001786 NMNAT3 (ENSSMRG00000001769) RBP1 (ENSSMRG00000001756) RBP2 (ENSSMRG00000001753) MRI1 (ENSSMRG00000001749) COPB2 (ENSSMRG00000001722) MRPS22 (ENSSMRG00000001713) FOXL2 (ENSSMRG00000001687) PIK3CB (ENSSMRG00000001668) ENSSMRG00000001635 PER2 (ENSSMRG00000001601) Common wall lizard MODERN SPECIES 13 SERPINE2 (ENSPMRG00000016493) WDFY1 (ENSPMRG00000016470) AP1S3 (ENSPMRG00000016466) SCG2 (ENSPMRG00000016462) ENSPMRG00000016455 ENSPMRG00000016451 ACSL3 (ENSPMRG00000016441) MOGAT1 (ENSPMRG00000016432) FARSB (ENSPMRG00000016424) SGPP2 (ENSPMRG00000016417) ENSPMRG00000016413 PAX3 (ENSPMRG00000016396) ENSPMRG00000016389 EPHA4 (ENSPMRG00000016372) PXYLP1 (ENSPMRG00000016358) SLC25A36 (ENSPMRG00000016340) #22 ENSPMRG00000016325 ##23 ENSPMRG00000016321 TRIM42 (ENSPMRG00000016295) ENSPMRG00000016287 CLSTN2 (ENSPMRG00000016218) #24 NMNAT3 (ENSPMRG00000016195) RBP2 (ENSPMRG00000016180) MRI1 (ENSPMRG00000016166) COPB2 (ENSPMRG00000016103) MRPS22 (ENSPMRG00000016079) FOXL2 (ENSPMRG00000016072) PIK3CB (ENSPMRG00000016065) ENSPMRG00000016057 PER2 (ENSPMRG00000016046) HES6 (ENSPMRG00000016042) Toxicofera ANCESTRAL SPECIES 2 ENSGT00940000155066 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT00940000156504 ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00390000013732 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000159217 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 Lizard MODERN SPECIES 1017 PXYLP1 (ENSACAG00000040553) ENSACAG00000013996 #22 ENSACAG00000015473 ##23 Elapidae ANCESTRAL SPECIES 4 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT01000000218546 ENSGT00940000156504.b ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b.e #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00390000013732 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000159217 ENSGT00950000183089.o.b ENSGT01100000263567.a.b ENSGT01060000248528.b.jh.a.a.b Indian cobra MODERN SPECIES 3 CUL3 (ENSNNAG00000007984) FAM124B (ENSNNAG00000007967) SERPINE2 (ENSNNAG00000007931) WDFY1 (ENSNNAG00000007862) AP1S3 (ENSNNAG00000007837) SCG2 (ENSNNAG00000007798) ACSL3 (ENSNNAG00000007693) FARSB (ENSNNAG00000007607) SGPP2 (ENSNNAG00000015724) ENSNNAG00000015709 ENSNNAG00000015699 PAX3 (ENSNNAG00000015441) ENSNNAG00000015419 EPHA4 (ENSNNAG00000015388) PXYLP1 (ENSNNAG00000015378) SLC25A36 (ENSNNAG00000015340) #22 ENSNNAG00000015327 ##23 TRIM42 (ENSNNAG00000015273) CLSTN2 (ENSNNAG00000015133) #24 RBP1 (ENSNNAG00000015115) NMNAT3 (ENSNNAG00000015091) RBP2 (ENSNNAG00000015069) MRI1 (ENSNNAG00000015056) COPB2 (ENSNNAG00000015032) MRPS22 (ENSNNAG00000014999) FOXL2 (ENSNNAG00000014984) PIK3CB (ENSNNAG00000014925) ENSNNAG00000014869 PER2 (ENSNNAG00000014610) ENSNNAG00000014568 ENSNNAG00000014557 Elapidae_a ANCESTRAL SPECIES ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT01000000218546 ENSGT00940000156504.b ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b.e #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00390000013732 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370 ENSGT00940000159217.q ENSGT00950000183089.o.b ENSGT01100000263567.a.b ENSGT01060000248528.b.jh.a.a.b Acanthophiinae DUPLICATION Acanthophiinae ANCESTRAL SPECIES 1 ENSGT00590000083134.a.b ENSGT00940000158424 ENSGT00940000157731 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.a ENSGT01000000218546 ENSGT00940000156504.b ENSGT01030000235098 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369.e #22 ENSGT00530000064220 ENSGT00950000183086.a.a.b.e #24 ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00390000013732 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000158370.p ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578 ENSGT00390000004360.a.b.b Eastern brown snake MODERN SPECIES 16 ENSPTXG00000003408 CUL3 (ENSPTXG00000003406) SERPINE2 (ENSPTXG00000003403) WDFY1 (ENSPTXG00000003400) AP1S3 (ENSPTXG00000003399) SCG2 (ENSPTXG00000003397) KCNE4 (ENSPTXG00000003396) ACSL3 (ENSPTXG00000003394) FARSB (ENSPTXG00000003392) SGPP2 (ENSPTXG00000003390) ENSPTXG00000003388 PAX3 (ENSPTXG00000003372) ENSPTXG00000003370 EPHA4 (ENSPTXG00000001699) PXYLP1 (ENSPTXG00000001675) SLC25A36 (ENSPTXG00000001673) #22 ENSPTXG00000001672 ##23 TRIM42 (ENSPTXG00000001536) CLSTN2 (ENSPTXG00000001530) #24 NMNAT3 (ENSPTXG00000001519) RBP1 (ENSPTXG00000001517) RBP2 (ENSPTXG00000001513) MRI1 (ENSPTXG00000001490) COPB2 (ENSPTXG00000001487) MRPS22 (ENSPTXG00000001484) FOXL2 (ENSPTXG00000001482) PIK3CB (ENSPTXG00000001480) ENSPTXG00000001401 ENSPTXG00000001395 ENSPTXG00000001392 ENSPTXG00000001389 Mainland tiger snake MODERN SPECIES FAM124B (ENSNSUG00000014485) SERPINE2 (ENSNSUG00000014478) WDFY1 (ENSNSUG00000014398) SCG2 (ENSNSUG00000014397) ENSNSUG00000014396 ACSL3 (ENSNSUG00000014239) ENSNSUG00000014238 FARSB (ENSNSUG00000014230) SGPP2 (ENSNSUG00000014229) ENSNSUG00000014228 ENSNSUG00000014227 PAX3 (ENSNSUG00000014226) ENSNSUG00000014225 EPHA4 (ENSNSUG00000014222) PXYLP1 (ENSNSUG00000014220) ENSNSUG00000014219 #22 ENSNSUG00000014218 ##23 TRIM42 (ENSNSUG00000014212) CLSTN2 (ENSNSUG00000014211) #24 NMNAT3 (ENSNSUG00000014210) RBP1 (ENSNSUG00000014209) RBP2 (ENSNSUG00000014208) MRI1 (ENSNSUG00000014207) COPB2 (ENSNSUG00000013758) MRPS22 (ENSNSUG00000013757) FOXL2 (ENSNSUG00000013756) PIK3CB (ENSNSUG00000013753) ENSNSUG00000013752 ENSNSUG00000013751 HES6 (ENSNSUG00000013748) CAB39 (ENSNSUG00000013747) Acanthophiinae ANCESTRAL SPECIES ENSGT00940000154369.f #22 Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 170 ENSNSUG00000019065 #22 ENSNSUG00000019067 ENSNSUG00000019068 ENSNSUG00000019069 Mainland tiger snake MODERN SPECIES 171 ENSNSUG00000019071 #22 ENSNSUG00000019073 ENSNSUG00000019074 ENSNSUG00000019075 Blue-lipped sea krait MODERN SPECIES 6742 SLC25A36 (ENSLLTG00000015002) #22