Percomorphaceae_D	ANCESTRAL SPECIES	9	ENSGT00940000164087 #8	ENSGT00940000158424 #9	ENSGT00940000157731 #10	ENSGT00940000165979 #11	ENSGT00970000193372.b.a.b	ENSGT00390000010895.a #12	ENSGT00390000013776 #13	ENSGT00940000155954.b #14	ENSGT00530000063489.a #15	ENSGT00940000176917 #16	ENSGT00940000159500 #17	ENSGT00940000166595.b #18	ENSGT00940000156504.i.a #19	ENSGT00940000156948.j #20	ENSGT00390000016324 #21	ENSGT00940000154369.g.b #22	ENSGT01030000234629.C.b #23	ENSGT00950000183086.a.a.b.h.a #24	ENSGT00950000183136.b.b.c #25	ENSGT00940000160165.a.b #26	ENSGT00900000141083.c.b #27	ENSGT00390000006095 #28	ENSGT00940000157522 #29	ENSGT00940000156342.d #30	ENSGT00940000161398.e #31	ENSGT00940000164578.a.a #32	ENSGT00390000004360.a.a #33	ENSGT00950000183115.a.a.a #34	ENSGT00950000183136.b.b.d #35	ENSGT00940000160281 #36	ENSGT00940000161057 #37
Anabantaria	ANCESTRAL SPECIES	9	ENSGT00940000153386.B #7	ENSGT00940000164087 #8	ENSGT00940000158424 #9	ENSGT00940000157731 #10	ENSGT00940000165979 #11	ENSGT00390000010895.a #12	ENSGT00390000013776 #13	ENSGT00940000155954.b #14	ENSGT00530000063489.a #15	ENSGT00940000176917 #16	ENSGT00940000159500 #17	ENSGT00940000166595.b #18	ENSGT00940000156504.i.a #19	ENSGT00940000156948.j #20	ENSGT00390000016324 #21	ENSGT00940000154369.g.b #22	ENSGT01030000234629.C.b #23	ENSGT00950000183086.a.a.b.h.a #24	ENSGT00950000183136.b.b.c #25	ENSGT00940000160165.a.b #26	ENSGT00900000141083.c.b #27	ENSGT00390000006095 #28	ENSGT00940000157522 #29	ENSGT00940000156342.d #30	ENSGT00940000161398.e #31	ENSGT00940000164578.a.a #32	ENSGT00390000004360.a.a #33	ENSGT00950000183115.a.a.a #34	ENSGT00950000183136.b.b.d #35	ENSGT00940000160281 #36	ENSGT00940000161057 #37
Zig-zag eel	MODERN SPECIES	4	ENSMAMG00000011642 #7	prss16 (ENSMAMG00000011675) #8	serpine2 (ENSMAMG00000011683) #9	wdfy1 (ENSMAMG00000011685) #10	dhrs12la (ENSMAMG00000011712) #11	ENSMAMG00000026117 #12	kcne4 (ENSMAMG00000011787) #13	acsl3a (ENSMAMG00000011800) #14	farsb (ENSMAMG00000011835) #15	ENSMAMG00000011897 #16	SGPP2 (ENSMAMG00000011912) #17	ENSMAMG00000011970 #18	pax3b (ENSMAMG00000011978) #19	EPHA4 (ENSMAMG00000012022) #20	pxylp1 (ENSMAMG00000012120) #21	ENSMAMG00000026348 #22	ENSMAMG00000012146 #23	ENSMAMG00000012176 #24	ENSMAMG00000024587 #25	RBP2 (ENSMAMG00000012240) #26	MRPS22 (ENSMAMG00000012264) #28	ENSMAMG00000012296 #29	ENSMAMG00000012347 #30	ENSMAMG00000012374 #31	ENSMAMG00000027547 #32	ENSMAMG00000012469 #33	ENSMAMG00000012502 #34	ENSMAMG00000028330 #36	meis3 (ENSMAMG00000012541) #37	ENSMAMG00000026554	sirt2 (ENSMAMG00000012576)
Anabantoidei	ANCESTRAL SPECIES	14	ENSGT00940000153386.B #7	ENSGT00940000164087 #8	ENSGT00940000158424 #9	ENSGT00940000157731 #10	ENSGT00940000165979 #11	ENSGT00390000010895.a #12	ENSGT00390000013776 #13	ENSGT00940000155954.b #14	ENSGT00530000063489.a #15	ENSGT00940000176917 #16	ENSGT00940000159500 #17	ENSGT00940000166595.b #18	ENSGT00940000156504.i.a #19	ENSGT00940000156948.j #20	ENSGT00390000016324 #21	ENSGT00940000154369.g.b #22	ENSGT01030000234629.C.b #23	ENSGT00950000183086.a.a.b.h.a #24	ENSGT00950000183136.b.b.c #25	ENSGT00940000160165.a.b #26	ENSGT00900000141083.c.b #27	ENSGT00390000006095 #28	ENSGT00940000157522 #29	ENSGT00940000156342.d #30	ENSGT00940000161398.e #31	ENSGT00940000164578.a.a #32	ENSGT00390000004360.a.a #33	ENSGT00950000183115.a.a.a #34	ENSGT00950000183136.b.b.d #35	ENSGT00940000160281 #36	ENSGT00940000161057 #37
Siamese fighting fish	MODERN SPECIES	4	prss16 (ENSBSLG00000020948) #8	serpine2 (ENSBSLG00000020585) #9	wdfy1 (ENSBSLG00000020575) #10	dhrs12la (ENSBSLG00000020564) #11	ENSBSLG00000020560 #12	kcne4 (ENSBSLG00000020558) #13	acsl3a (ENSBSLG00000019665) #14	ENSBSLG00000019622 #16	farsb (ENSBSLG00000019456) #15	SGPP2 (ENSBSLG00000019393) #17	ENSBSLG00000019391 #18	pax3b (ENSBSLG00000019381) #19	epha4a (ENSBSLG00000018927) #20	pxylp1 (ENSBSLG00000018811) #21	ENSBSLG00000018797	SLC25A36 (ENSBSLG00000018769) #22	spsb4a (ENSBSLG00000018738) #23	CLSTN2 (ENSBSLG00000016943) #24	rbp2a (ENSBSLG00000015872) #26	COPB2 (ENSBSLG00000015276) #27	mrps22 (ENSBSLG00000015161) #28	PIK3CB (ENSBSLG00000013020) #29	ENSBSLG00000012891 #30	her13 (ENSBSLG00000012880) #31	ENSBSLG00000012856 #33	ITM2C (ENSBSLG00000012845) #34	ENSBSLG00000012841 #25	ENSBSLG00000012832 #36	meis3 (ENSBSLG00000012619) #37	ENSBSLG00000012579	sirt2 (ENSBSLG00000012322)
Climbing perch	MODERN SPECIES	4	ENSATEG00000020752	ENSATEG00000020821	ENSATEG00000020911 #7	prss16 (ENSATEG00000020982) #8	serpine2 (ENSATEG00000020995) #9	wdfy1 (ENSATEG00000021008) #10	dhrs12la (ENSATEG00000021047) #11	ENSATEG00000021367 #12	kcne4 (ENSATEG00000021395) #13	acsl3a (ENSATEG00000021403) #14	farsb (ENSATEG00000021441) #15	SGPP2 (ENSATEG00000021475) #17	pax3b (ENSATEG00000021488) #19	EPHA4 (ENSATEG00000021519) #20	pxylp1 (ENSATEG00000021551) #21	ENSATEG00000021568 #22	ENSATEG00000021585 #23	ENSATEG00000021594 #24	ENSATEG00000021614 #25	ENSATEG00000026860	RBP2 (ENSATEG00000021618) #26	COPB2 (ENSATEG00000021631) #27	MRPS22 (ENSATEG00000021646) #28	PIK3CB (ENSATEG00000021657) #29	ENSATEG00000021691 #30	ENSATEG00000021709 #31	ENSATEG00000025611 #32	ENSATEG00000021754 #33	ITM2C (ENSATEG00000021766) #34	ENSATEG00000021777 #35	ENSATEG00000021783 #36
Carangaria	ANCESTRAL SPECIES	8	ENSGT00940000164087 #8	ENSGT00940000158424 #9	ENSGT00940000157731 #10	ENSGT00940000165979 #11	ENSGT00970000193372.b.a.b	ENSGT00390000010895.a #12	ENSGT00390000013776 #13	ENSGT00940000155954.b #14	ENSGT00530000063489.a #15	ENSGT00940000176917 #16	ENSGT00940000159500 #17	ENSGT00940000166595.b #18	ENSGT00940000156504.i.a #19	ENSGT00940000156948.j #20	ENSGT00390000016324 #21	ENSGT00940000154369.g.b #22	ENSGT01030000234629.C.b #23	ENSGT00950000183086.a.a.b.h.a #24	ENSGT00950000183136.b.b.c #25	ENSGT00940000160165.a.b #26	ENSGT00900000141083.c.b #27	ENSGT00390000006095 #28	ENSGT00940000157522 #29	ENSGT00940000156342.d #30	ENSGT00940000161398.e #31	ENSGT00940000164578.a.a #32	ENSGT00390000004360.a.a #33	ENSGT00950000183115.a.a.a #34	ENSGT00950000183136.b.b.d #35	ENSGT00940000160281 #36	ENSGT00940000161057 #37
Carangaria_A	ANCESTRAL SPECIES	37	ENSGT00940000164087 #8	ENSGT00940000158424 #9	ENSGT00940000157731 #10	ENSGT00940000165979 #11	ENSGT00970000193372.b.a.b	ENSGT00390000010895.a #12	ENSGT00390000013776 #13	ENSGT00940000155954.b #14	ENSGT00530000063489.a #15	ENSGT00940000176917 #16	ENSGT00940000159500 #17	ENSGT00940000166595.b #18	ENSGT00940000156504.i.a #19	ENSGT00940000156948.j #20	ENSGT00390000016324 #21	ENSGT00940000154369.g.b #22	ENSGT01030000234629.C.b #23	ENSGT00950000183086.a.a.b.h.a #24	ENSGT00950000183136.b.b.c #25	ENSGT00940000160165.a.b #26	ENSGT00900000141083.c.b #27	ENSGT00390000006095 #28	ENSGT00940000157522 #29	ENSGT00940000156342.d #30	ENSGT00940000161398.e #31	ENSGT00940000164578.a.a #32	ENSGT00390000004360.a.a #33	ENSGT00950000183115.a.a.a #34	ENSGT00950000183136.b.b.d #35	ENSGT00940000160281 #36	ENSGT00940000161057 #37
Seriola	ANCESTRAL SPECIES	51	ENSGT00940000164087 #8	ENSGT00940000158424 #9	ENSGT00940000157731 #10	ENSGT00940000165979 #11	ENSGT00970000193372.b.a.b	ENSGT00390000010895.a #12	ENSGT00390000013776 #13	ENSGT00940000155954.b #14	ENSGT00530000063489.a #15	ENSGT00940000176917 #16	ENSGT00940000159500 #17	ENSGT00940000166595.b #18	ENSGT00940000156504.i.a #19	ENSGT00940000156948.j #20	ENSGT00390000016324 #21	ENSGT00940000154369.g.b #22	ENSGT01030000234629.C.b #23	ENSGT00950000183086.a.a.b.h.a #24	ENSGT00950000183136.b.b.c #25	ENSGT00940000160165.a.b #26	ENSGT00900000141083.c.b #27	ENSGT00390000006095 #28	ENSGT00940000157522 #29	ENSGT00940000156342.d #30	ENSGT00940000161398.e #31	ENSGT00940000164578.a.a #32	ENSGT00390000004360.a.a #33	ENSGT00950000183115.a.a.a #34	ENSGT00950000183136.b.b.d #35	ENSGT00940000160281 #36	ENSGT00940000161057 #37
Yellowtail amberjack	MODERN SPECIES	3091															pxylp1 (ENSSLDG00000025042) #21	SLC25A36 (ENSSLDG00000025033) #22	spsb4a (ENSSLDG00000025027) #23	CLSTN2 (ENSSLDG00000025020) #24	lpar5b (ENSSLDG00000025014) #25	rbp2a (ENSSLDG00000025008) #26	COPB2 (ENSSLDG00000024979) #27	mrps22 (ENSSLDG00000024969) #28	PIK3CB (ENSSLDG00000024911) #29	ENSSLDG00000024851 #30	HES6 (ENSSLDG00000024834) #31	her8.2 (ENSSLDG00000024823) #32	ENSSLDG00000024805 #33	ITM2C (ENSSLDG00000024796) #34	lpar5b (ENSSLDG00000024790) #35	ENSSLDG00000024786
Greater amberjack	MODERN SPECIES	114	serpine2 (ENSSDUG00000009476) #9	wdfy1 (ENSSDUG00000009505) #10	dhrs12la (ENSSDUG00000009540) #11	AP1S3 (ENSSDUG00000009569)	ENSSDUG00000009583 #12	kcne4 (ENSSDUG00000009590) #13	acsl3a (ENSSDUG00000009608) #14	farsb (ENSSDUG00000009685) #15	ENSSDUG00000009771 #16	SGPP2 (ENSSDUG00000009776) #17	ENSSDUG00000009793 #18	pax3b (ENSSDUG00000009804) #19	epha4a (ENSSDUG00000009839) #20	ENSSDUG00000009883 #20	pxylp1 (ENSSDUG00000009897) #21	SLC25A36 (ENSSDUG00000009920) #22	spsb4a (ENSSDUG00000009950) #23	CLSTN2 (ENSSDUG00000009967) #24	lpar5b (ENSSDUG00000010000) #25	rbp2a (ENSSDUG00000010022) #26	COPB2 (ENSSDUG00000010056) #27	mrps22 (ENSSDUG00000010135) #28	foxl2b (ENSSDUG00000010149)	PIK3CB (ENSSDUG00000010182) #29	PER2 (ENSSDUG00000010286) #30	HES6 (ENSSDUG00000010317) #31	her8.2 (ENSSDUG00000010328) #32	ENSSDUG00000010338 #33	ITM2C (ENSSDUG00000010370) #34	lpar5b (ENSSDUG00000010411) #35	ENSSDUG00000010420 #36
Barramundi perch	MODERN SPECIES	124	psmd2 (ENSLCAG00010002522) #7	prss16 (ENSLCAG00010002731) #8	serpine2 (ENSLCAG00010002733) #9	wdfy1 (ENSLCAG00010002740) #10	dhrs12la (ENSLCAG00010002752) #11	ENSLCAG00010002758 #12	kcne4 (ENSLCAG00010002760) #13	acsl3a (ENSLCAG00010002837) #14	farsb (ENSLCAG00010003414) #15	ENSLCAG00010003460 #16	SGPP2 (ENSLCAG00010003464) #17	ENSLCAG00010003467 #18	pax3b (ENSLCAG00010003474) #19	epha4a (ENSLCAG00010003599) #20	pxylp1 (ENSLCAG00010004187) #21	SLC25A36 (ENSLCAG00010004194) #22	spsb4a (ENSLCAG00010004206) #23	CLSTN2 (ENSLCAG00010004213) #24	lpar5b (ENSLCAG00010004216) #25	rbp2a (ENSLCAG00010004218) #26	COPB2 (ENSLCAG00010004245) #27	mrps22 (ENSLCAG00010004320) #28	PIK3CB (ENSLCAG00010004460) #29	ENSLCAG00010004908 #30	HES6 (ENSLCAG00010005146) #31	her8.2 (ENSLCAG00010005153) #32	myo7aa (ENSLCAG00010005254)	ENSLCAG00010005772
Pleuronectoidei	ANCESTRAL SPECIES	13	ENSGT00940000164087 #8	ENSGT00940000158424 #9	ENSGT00940000157731 #10	ENSGT00940000165979 #11	ENSGT00970000193372.b.a.b	ENSGT00390000010895.a #12	ENSGT00390000013776 #13	ENSGT00940000155954.b #14	ENSGT00530000063489.a #15	ENSGT00940000176917 #16	ENSGT00940000159500 #17	ENSGT00940000166595.b #18	ENSGT00940000156504.i.a #19	ENSGT00940000156948.j #20	ENSGT00390000016324 #21	ENSGT00940000154369.g.b #22	ENSGT01030000234629.C.b #23	ENSGT00950000183086.a.a.b.h.a #24	ENSGT00950000183136.b.b.d #35	ENSGT00940000160165.a.b #26	ENSGT00900000141083.c.b #27	ENSGT00390000006095 #28	ENSGT00940000157522 #29	ENSGT00940000156342.d #30	ENSGT00940000161398.e #31	ENSGT00940000164578.a.a #32	ENSGT00390000004360.a.a #33	ENSGT00950000183115.a.a.a #34	ENSGT00940000160281 #36	ENSGT00940000161057 #37	ENSGT00940000154866.A
Tongue sole	MODERN SPECIES	14	bcl9l (ENSCSEG00000006896)	ENSCSEG00000006875	TREH (ENSCSEG00000006851)	ENSCSEG00000006846	FBXO40 (ENSCSEG00000006833)	ttc36 (ENSCSEG00000006840)	NECTIN1 (ENSCSEG00000006820)	ENSCSEG00000006815	trpc6a (ENSCSEG00000006802)	pgr (ENSCSEG00000006795)	ENSCSEG00000006789	ARHGAP42 (ENSCSEG00000006717)	cntn5 (ENSCSEG00000006697)	epha4a (ENSCSEG00000006677) #20	pxylp1 (ENSCSEG00000006664) #21	SLC25A36 (ENSCSEG00000006649) #22	spsb4a (ENSCSEG00000006639) #23	panx1a (ENSCSEG00000006624)	ENSCSEG00000006620	clns1a (ENSCSEG00000006611)	aqp11 (ENSCSEG00000006605)	pak1 (ENSCSEG00000006576)	GDPD4 (ENSCSEG00000006568)	myo7aa (ENSCSEG00000006533)	ompa (ENSCSEG00000006525)	CAPN5 (ENSCSEG00000006517)	dcun1d5 (ENSCSEG00000006513)	CUL5 (ENSCSEG00000006499)	SLC35F2 (ENSCSEG00000006494)	flot2b (ENSCSEG00000006488)	FAM222B (ENSCSEG00000006481)
Turbot	MODERN SPECIES	15	ENSSMAG00000020563	ENSSMAG00000020589 #7	prss16 (ENSSMAG00000020598) #8	serpine2 (ENSSMAG00000020601) #9	wdfy1 (ENSSMAG00000020603) #10	dhrs12la (ENSSMAG00000020608) #11	ENSSMAG00000020660 #12	kcne4 (ENSSMAG00000020661) #13	acsl3a (ENSSMAG00000020663) #14	farsb (ENSSMAG00000020668) #15	ENSSMAG00000020677 #16	SGPP2 (ENSSMAG00000020680) #17	ENSSMAG00000020682	pax3b (ENSSMAG00000020683) #19	EPHA4 (ENSSMAG00000020688) #20	ENSSMAG00000020692 #22	pxylp1 (ENSSMAG00000020689) #21	ENSSMAG00000020694 #23	ENSSMAG00000027874	ENSSMAG00000020698 #24	ENSSMAG00000020702 #35	RBP2 (ENSSMAG00000025467) #26	COPB2 (ENSSMAG00000020707) #27	MRPS22 (ENSSMAG00000020714) #28	PIK3CB (ENSSMAG00000000112) #29	ENSSMAG00000000129 #30	ENSSMAG00000029620 #31	ENSSMAG00000000161 #32	ENSSMAG00000000166 #33	ENSSMAG00000000194	ENSSMAG00000000173 #34