Neopterygii ANCESTRAL SPECIES 17 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b ENSGT00390000010895 ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000166595.a ENSGT00940000156504 ENSGT00940000156948 ENSGT00390000016324 ENSGT00940000154369 #22 ENSGT01030000234629.C #23 Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 123 ENSGT00940000165979 ENSGT00970000193372.b.b ENSGT00970000193372.b.a.a ENSGT00390000010895 ENSGT00970000193372.b.a.b ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504 ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C #23 ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00940000160165.a ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e Clupeocephala ANCESTRAL SPECIES 451 ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 Euteleosteomorpha ANCESTRAL SPECIES 63 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.b ##10 ENSGT00940000164492.a.a #10 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00940000161729.m.a ENSGT00940000180772 ENSGT00390000011725.d ENSGT00940000153655.A.b ENSGT00390000011127.d Acanthomorphata ANCESTRAL SPECIES ENSGT00940000164804.a #9 ENSGT00940000164492.b ##10 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000163126.b.b ##20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Euacanthomorphacea ANCESTRAL SPECIES 4 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.b ##10 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.b ##10 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.b ##10 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Percomorphaceae_C ANCESTRAL SPECIES 6 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT00990000206484 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 Percomorphaceae_D ANCESTRAL SPECIES 6 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT00990000206484 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 Anabantaria ANCESTRAL SPECIES 8 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Anabantoidei ANCESTRAL SPECIES 18 ENSGT00940000161872 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Climbing perch MODERN SPECIES 8 ENSATEG00000018108 ENSATEG00000018067 #7 pik3r2 (ENSATEG00000018016) #8 ifi30 (ENSATEG00000017995) #9 ENSATEG00000017963 #10 ENSATEG00000016038 #11 jund (ENSATEG00000017942) #12 pgpep1 (ENSATEG00000017928) #13 upf1 (ENSATEG00000017867) #14 ENSATEG00000017747 #15 ENSATEG00000017729 #17 ENSATEG00000017721 #18 TIMM44 (ENSATEG00000029811) #19 rab11bb (ENSATEG00000017696) #20 ENSATEG00000017679 #21 ENSATEG00000017649 #22 spsb4a (ENSATEG00000017626) #23 zgc:136870 (ENSATEG00000025289) #24 clstn2a (ENSATEG00000017562) #25 NMNAT3 (ENSATEG00000017549) #26 rbp1.1 (ENSATEG00000017531) #27 rbp2b (ENSATEG00000017508) #28 copb2 (ENSATEG00000017430) #29 ENSATEG00000017381 #30 ENSATEG00000017335 #31 ENSATEG00000017306 #32 ENSATEG00000017285 #33 DYNC1I2 (ENSATEG00000017227) #34 ENSATEG00000017182 #35 METAP1D (ENSATEG00000017096) #36 ENSATEG00000017036 #37 Siamese fighting fish MODERN SPECIES 8 MED26 (ENSBSLG00000026361) crtc1a (ENSBSLG00000026358) ENSBSLG00000026355 ENSBSLG00000026340 #7 pik3r2 (ENSBSLG00000026300) #8 ifi30 (ENSBSLG00000026282) #9 ENSBSLG00000026267 #10 RAB3A (ENSBSLG00000026265) #11 jund (ENSBSLG00000026263) #12 upf1 (ENSBSLG00000026232) #14 HOMER3 (ENSBSLG00000026184) #15 CERS4 (ENSBSLG00000026180) #17 TIMM44 (ENSBSLG00000026140) #19 rab11bb (ENSBSLG00000026102) #20 MARCHF2 (ENSBSLG00000026100) #21 slc25a36a (ENSBSLG00000026093) #22 spsb4a (ENSBSLG00000026084) #23 clstn2a (ENSBSLG00000026017) #25 NMNAT3 (ENSBSLG00000025789) #26 rbp1.1 (ENSBSLG00000025786) #27 rbp2b (ENSBSLG00000025784) #28 copb2 (ENSBSLG00000025730) #29 dvl3a (ENSBSLG00000025490) #30 ap2m1a (ENSBSLG00000025307) #31 pcyt1aa (ENSBSLG00000025304) #32 and3 (ENSBSLG00000025301) #33 DYNC1I2 (ENSBSLG00000025146) #34 slc25a12 (ENSBSLG00000024692) #35 metap1d (ENSBSLG00000024664) #36 itga6b (ENSBSLG00000024452) #37 ENSBSLG00000024401 Zig-zag eel MODERN SPECIES 8 ENSMAMG00000005957 #7 pik3r2 (ENSMAMG00000005988) #8 ifi30 (ENSMAMG00000006032) #9 ENSMAMG00000006043 #10 ENSMAMG00000006185 #11 jund (ENSMAMG00000006203) #12 pgpep1 (ENSMAMG00000006217) #13 upf1 (ENSMAMG00000006229) #14 ENSMAMG00000006299 #15 uba52 (ENSMAMG00000006321) #16 ENSMAMG00000006327 #17 ENSMAMG00000006355 #18 ENSMAMG00000006367 #19 rab11bb (ENSMAMG00000006378) #20 ENSMAMG00000006383 #21 ENSMAMG00000024459 #22 spsb4a (ENSMAMG00000006429) #23 zgc:136870 (ENSMAMG00000006438) #24 clstn2a (ENSMAMG00000006456) #25 NMNAT3 (ENSMAMG00000006484) #26 rbp1.1 (ENSMAMG00000006493) #27 rbp2b (ENSMAMG00000006509) #28 copb2 (ENSMAMG00000006528) #29 ENSMAMG00000006605 #30 ENSMAMG00000006654 #31 ENSMAMG00000006685 #32 ENSMAMG00000006711 #33 DYNC1I2 (ENSMAMG00000006738) #34 ENSMAMG00000006786 #35 metap1d (ENSMAMG00000024396) #36 itga6b (ENSMAMG00000006870) #37 Carangaria ANCESTRAL SPECIES 5 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Pleuronectoidei ANCESTRAL SPECIES 1 ENSGT00940000161872 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT00990000206484 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Turbot MODERN SPECIES 19 ENSSMAG00000005337 ENSSMAG00000005306 #7 pik3r2 (ENSSMAG00000005255) #8 ifi30 (ENSSMAG00000005240) #9 ENSSMAG00000005152 #10 ENSSMAG00000005141 #11 jund (ENSSMAG00000005129) #12 pgpep1 (ENSSMAG00000005111) #13 upf1 (ENSSMAG00000005055) #14 ENSSMAG00000005036 #15 ENSSMAG00000004963 #17 ENSSMAG00000004955 #18 ENSSMAG00000004929 #19 rab11bb (ENSSMAG00000004922) #20 ENSSMAG00000004909 #21 slc25a36a (ENSSMAG00000004893) #22 ENSSMAG00000004876 spsb4a (ENSSMAG00000004857) #23 clstn2a (ENSSMAG00000004743) #25 NMNAT3 (ENSSMAG00000022760) #26 rbp1.1 (ENSSMAG00000004704) #27 rbp2b (ENSSMAG00000020703) #28 copb2 (ENSSMAG00000004635) #29 dvl3a (ENSSMAG00000004618) #30 ENSSMAG00000004560 #31 ENSSMAG00000004543 #32 ENSSMAG00000004527 #33 DYNC1I2 (ENSSMAG00000004501) #34 ENSSMAG00000004437 #35 metap1d (ENSSMAG00000004402) #36 itga6b (ENSSMAG00000004319) #37 Tongue sole MODERN SPECIES 12 mrpl34 (ENSCSEG00000011848) ABHD8 (ENSCSEG00000011834) ENSCSEG00000011867 st3gal3b (ENSCSEG00000011962) ENSCSEG00000012026 ptger4c (ENSCSEG00000012031) pif1 (ENSCSEG00000012036) ENSCSEG00000012053 nsun4 (ENSCSEG00000012057) dmbx1a (ENSCSEG00000012068) ENSCSEG00000012095 CTXN1 (ENSCSEG00000012121) #18 TIMM44 (ENSCSEG00000012127) #19 rab11bb (ENSCSEG00000012149) #20 MARCHF2 (ENSCSEG00000012156) #21 slc25a36a (ENSCSEG00000012199) #22 spsb4a (ENSCSEG00000012242) #23 clstn2a (ENSCSEG00000012265) #25 NMNAT3 (ENSCSEG00000012360) #26 rbp1.1 (ENSCSEG00000012366) #27 copb2 (ENSCSEG00000012387) #29 dvl3a (ENSCSEG00000012425) #30 ap2m1a (ENSCSEG00000012443) #31 pcyt1a (ENSCSEG00000013124) #32 and3 (ENSCSEG00000013163) #33 DYNC1I2 (ENSCSEG00000013179) #34 slc25a12 (ENSCSEG00000013220) #35 metap1d (ENSCSEG00000013260) #36 itga6b (ENSCSEG00000013305) #37 ENSCSEG00000013346 ENSCSEG00000013353 Carangaria_A ANCESTRAL SPECIES 2 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Seriola ANCESTRAL SPECIES ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Greater amberjack MODERN SPECIES 83 MAST3 (ENSSDUG00000012940) #7 pik3r2 (ENSSDUG00000013068) #8 ifi30 (ENSSDUG00000013153) #9 ENSSDUG00000013184 #10 RAB3A (ENSSDUG00000013259) #11 jund (ENSSDUG00000013277) #12 pgpep1 (ENSSDUG00000013291) #13 upf1 (ENSSDUG00000013320) #14 HOMER3 (ENSSDUG00000013419) #15 uba52 (ENSSDUG00000013436) #16 CERS4 (ENSSDUG00000013462) #17 CTXN1 (ENSSDUG00000013526) #18 TIMM44 (ENSSDUG00000013532) #19 rab11bb (ENSSDUG00000013558) #20 MARCHF2 (ENSSDUG00000013566) #21 slc25a36a (ENSSDUG00000013585) #22 spsb4a (ENSSDUG00000013610) #23 zgc:136870 (ENSSDUG00000013620) #24 clstn2a (ENSSDUG00000013636) #25 NMNAT3 (ENSSDUG00000013697) #26 rbp1.1 (ENSSDUG00000013706) #27 rbp2b (ENSSDUG00000013743) #28 copb2 (ENSSDUG00000013764) #29 dvl3a (ENSSDUG00000013838) #30 ap2m1a (ENSSDUG00000013877) #31 pcyt1aa (ENSSDUG00000013919) #32 and3 (ENSSDUG00000013946) #33 DYNC1I2 (ENSSDUG00000013954) #34 slc25a12 (ENSSDUG00000014017) #35 metap1d (ENSSDUG00000014092) #36 itga6b (ENSSDUG00000014125) #37 Yellowtail amberjack MODERN SPECIES 3160 MAST3 (ENSSLDG00000021107) #7 pik3r2 (ENSSLDG00000021025) #8 ifi30 (ENSSLDG00000021006) #9 ENSSLDG00000020948 #10 RAB3A (ENSSLDG00000020924) #11 jund (ENSSLDG00000020919) #12 pgpep1 (ENSSLDG00000020900) #13 upf1 (ENSSLDG00000020868) #14 HOMER3 (ENSSLDG00000020840) #15 uba52 (ENSSLDG00000020739) #16 CERS4 (ENSSLDG00000020711) #17 CTXN1 (ENSSLDG00000020704) #18 TIMM44 (ENSSLDG00000020686) #19 rab11bb (ENSSLDG00000020676) #20 MARCHF2 (ENSSLDG00000020670) #21 slc25a36a (ENSSLDG00000020649) #22 zgc:136870 (ENSSLDG00000020640) #24 spsb4a (ENSSLDG00000020633) #23 clstn2a (ENSSLDG00000020561) #25 NMNAT3 (ENSSLDG00000020535) #26 rbp1.1 (ENSSLDG00000020526) #27 rbp2b (ENSSLDG00000020513) #28 copb2 (ENSSLDG00000020433) #29 ENSSLDG00000020405 #30 dvl3a (ENSSLDG00000020388) #30 ap2m1a (ENSSLDG00000020332) #31 pcyt1aa (ENSSLDG00000020304) #32 and3 (ENSSLDG00000020294) #33 DYNC1I2 (ENSSLDG00000020217) #34 slc25a12 (ENSSLDG00000020138) #35 metap1d (ENSSLDG00000020116) #36 Barramundi perch MODERN SPECIES 69 MAST3 (ENSLCAG00010021565) #7 pik3r2 (ENSLCAG00010021561) #8 ifi30 (ENSLCAG00010021559) #9 ENSLCAG00010021553 #10 RAB3A (ENSLCAG00010021537) #11 jund (ENSLCAG00010021531) #12 pgpep1 (ENSLCAG00010021529) #13 upf1 (ENSLCAG00010021515) #14 HOMER3 (ENSLCAG00010021508) #15 uba52 (ENSLCAG00010021500) #16 CERS4 (ENSLCAG00010021499) #17 CTXN1 (ENSLCAG00010021496) #18 TIMM44 (ENSLCAG00010021394) #19 rab11bb (ENSLCAG00010021340) #20 MARCHF2 (ENSLCAG00010021331) #21 slc25a36a (ENSLCAG00010021326) #22 zgc:136870 (ENSLCAG00010021318) #24 spsb4a (ENSLCAG00010021315) #23 clstn2a (ENSLCAG00010021304) #25 NMNAT3 (ENSLCAG00010021301) #26 rbp1.1 (ENSLCAG00010021298) #27 rbp2b (ENSLCAG00010021293) #28 copb2 (ENSLCAG00010020835) #29 dvl3a (ENSLCAG00010020676) #30 ap2m1a (ENSLCAG00010020671) #31 pcyt1aa (ENSLCAG00010020649) #32 and3 (ENSLCAG00010020638) #33 DYNC1I2 (ENSLCAG00010020244) #34 slc25a12 (ENSLCAG00010020138) #35 metap1d (ENSLCAG00010020111) #36 itga6b (ENSLCAG00010019951) #37 Eupercaria ANCESTRAL SPECIES 22 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT00990000206484 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 Tetraodontidae ANCESTRAL SPECIES 13 ENSGT00940000161872 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT00990000206484 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Tetraodon MODERN SPECIES 6 crtc1a (ENSTNIG00000011067) ENSTNIG00000011068 MAST3 (ENSTNIG00000011069) #7 pik3r2 (ENSTNIG00000011070) #8 ifi30 (ENSTNIG00000011071) #9 ENSTNIG00000011072 #10 RAB3A (ENSTNIG00000011073) #11 pgpep1 (ENSTNIG00000011075) #13 upf1 (ENSTNIG00000011076) #14 HOMER3 (ENSTNIG00000011077) #15 ENSTNIG00000011078 #17 CTXN1 (ENSTNIG00000011079) #18 TIMM44 (ENSTNIG00000011080) #19 rab11bb (ENSTNIG00000011081) #20 MARCHF2 (ENSTNIG00000011082) #21 slc25a36a (ENSTNIG00000011083) #22 spsb4a (ENSTNIG00000011084) #23 clstn2a (ENSTNIG00000011085) #25 NMNAT3 (ENSTNIG00000011086) #26 copb2 (ENSTNIG00000011087) #29 dvl3a (ENSTNIG00000011088) #30 ap2m1a (ENSTNIG00000011089) #31 pcyt1aa (ENSTNIG00000011090) #32 and3 (ENSTNIG00000011091) #33 DYNC1I2 (ENSTNIG00000011092) #34 slc25a12 (ENSTNIG00000011093) #35 metap1d (ENSTNIG00000011094) #36 itga6b (ENSTNIG00000011095) #37 rapgef4b (ENSTNIG00000011096) ENSTNIG00000011097 ENSTNIG00000011098 Fugu MODERN SPECIES 14 ENSTRUG00000031956 MAST3 (ENSTRUG00000010313) #7 pik3r2 (ENSTRUG00000010476) #8 ifi30 (ENSTRUG00000010959) #9 ENSTRUG00000011028 #10 RAB3A (ENSTRUG00000011189) #11 jund (ENSTRUG00000024983) #12 pgpep1 (ENSTRUG00000026311) #13 upf1 (ENSTRUG00000000150) #14 HOMER3 (ENSTRUG00000000171) #15 ENSTRUG00000000191 #17 CTXN1 (ENSTRUG00000000204) #18 TIMM44 (ENSTRUG00000000206) #19 rab11bb (ENSTRUG00000033264) #20 MARCHF2 (ENSTRUG00000000243) #21 slc25a36a (ENSTRUG00000000258) #22 ENSTRUG00000000285 spsb4a (ENSTRUG00000023923) #23 clstn2a (ENSTRUG00000000290) #25 NMNAT3 (ENSTRUG00000000361) #26 rbp1.1 (ENSTRUG00000000390) #27 copb2 (ENSTRUG00000000411) #29 dvl3a (ENSTRUG00000000483) #30 ap2m1a (ENSTRUG00000000587) #31 pcyt1aa (ENSTRUG00000000674) #32 and3 (ENSTRUG00000025029) #33 ENSTRUG00000000748 #34 slc25a12 (ENSTRUG00000000852) #35 ENSTRUG00000001321 #37 ENSTRUG00000002461 rapgef4b (ENSTRUG00000002566) Eupecaria_A ANCESTRAL SPECIES 8 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 218 ENSLBEG00000014147 ENSLBEG00000014236 #7 pik3r2 (ENSLBEG00000014394) #8 ifi30 (ENSLBEG00000014482) #9 ENSLBEG00000014543 #10 RAB3A (ENSLBEG00000014792) #11 jund (ENSLBEG00000014823) #12 pgpep1 (ENSLBEG00000014837) #13 upf1 (ENSLBEG00000014862) #14 HOMER3 (ENSLBEG00000014982) #15 ENSLBEG00000015169 #17 CTXN1 (ENSLBEG00000015199) #18 TIMM44 (ENSLBEG00000015213) #19 rab11bb (ENSLBEG00000015248) #20 MARCHF2 (ENSLBEG00000015279) #21 slc25a36a (ENSLBEG00000015309) #22 spsb4a (ENSLBEG00000015356) #23 zgc:136870 (ENSLBEG00000015372) #24 clstn2a (ENSLBEG00000015393) #25 NMNAT3 (ENSLBEG00000015448) #26 rbp1.1 (ENSLBEG00000015461) #27 rbp2b (ENSLBEG00000015473) #28 copb2 (ENSLBEG00000015514) #29 dvl3a (ENSLBEG00000015569) #30 ENSLBEG00000015680 Ballan wrasse MODERN SPECIES 3984 MARCHF2 (ENSLBEG00000001901) #21 ENSLBEG00000001883 #22 Eupecaria_B ANCESTRAL SPECIES 8 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Perciformes ANCESTRAL SPECIES 5 ENSGT00940000157166.d.b #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.f ##16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Cottioidei ANCESTRAL SPECIES 15 ENSGT00940000157166.d.b #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.f ##16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Lumpfish MODERN SPECIES 8 pik3r2 (ENSCLMG00005009644) #8 ifi30 (ENSCLMG00005009629) #9 ENSCLMG00005009477 #10 RAB3A (ENSCLMG00005009473) #11 jund (ENSCLMG00005009472) #12 pgpep1 (ENSCLMG00005009453) #13 upf1 (ENSCLMG00005009276) #14 ENSCLMG00005009267 #15 ENSCLMG00005009265 #15 uba52 (ENSCLMG00005009262) ##16 CERS4 (ENSCLMG00005009260) #17 CTXN1 (ENSCLMG00005009257) #18 TIMM44 (ENSCLMG00005009244) #19 rab11bb (ENSCLMG00005009159) #20 MARCHF2 (ENSCLMG00005009155) #21 slc25a36a (ENSCLMG00005009154) #22 spsb4a (ENSCLMG00005009153) #23 clstn2a (ENSCLMG00005009148) #25 NMNAT3 (ENSCLMG00005009145) #26 rbp1.1 (ENSCLMG00005009141) #27 rbp2b (ENSCLMG00005009140) #28 copb2 (ENSCLMG00005008047) #29 dvl3a (ENSCLMG00005007983) #30 ap2m1a (ENSCLMG00005007959) #31 pcyt1aa (ENSCLMG00005007903) #32 and3 (ENSCLMG00005007900) #33 DYNC1I2 (ENSCLMG00005007699) #34 SLC25A12 (ENSCLMG00005002153) #35 metap1d (ENSCLMG00005002132) #36 ITGA6 (ENSCLMG00005001716) #37 rapgef4b (ENSCLMG00005008934) Stickleback MODERN SPECIES 2 ENSGACG00000015527 MAST3 (ENSGACG00000015523) #7 pik3r2 (ENSGACG00000015520) #8 ifi30 (ENSGACG00000015519) #9 ENSGACG00000015515 #10 RAB3A (ENSGACG00000015513) #11 jund (ENSGACG00000015511) #12 pgpep1 (ENSGACG00000015509) #13 upf1 (ENSGACG00000015504) #14 ENSGACG00000015501 ##15 CERS4 (ENSGACG00000015496) #17 ENSGACG00000015495 TIMM44 (ENSGACG00000015487) #19 rab11bb (ENSGACG00000015479) #20 MARCHF2 (ENSGACG00000015477) #21 slc25a36a (ENSGACG00000015473) #22 spsb4a (ENSGACG00000015471) #23 clstn2a (ENSGACG00000015468) #25 NMNAT3 (ENSGACG00000015460) #26 copb2 (ENSGACG00000015455) #29 dvl3a (ENSGACG00000015451) #30 ap2m1a (ENSGACG00000015444) #31 pcyt1aa (ENSGACG00000015442) #32 and3 (ENSGACG00000015438) #33 DYNC1I2 (ENSGACG00000015431) #34 slc25a12 (ENSGACG00000015426) #35 metap1d (ENSGACG00000015425) #36 itga6b (ENSGACG00000015418) #37 ENSGACG00000015416 ENSGACG00000015414 rapgef4b (ENSGACG00000015410) Perciformes_a ANCESTRAL SPECIES 17 ENSGT00940000157166.d.b #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.f ##16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Pike perch MODERN SPECIES 55 ENSSLUG00000005443 MAST3 (ENSSLUG00000005343) #7 pik3r2 (ENSSLUG00000004691) #8 ifi30 (ENSSLUG00000004635) #9 ENSSLUG00000004338 #10 RAB3A (ENSSLUG00000004254) #11 jund (ENSSLUG00000004248) #12 pgpep1 (ENSSLUG00000004242) #13 upf1 (ENSSLUG00000004153) #14 HOMER3 (ENSSLUG00000004119) #15 ENSSLUG00000004097 #17 CTXN1 (ENSSLUG00000004074) #18 TIMM44 (ENSSLUG00000003631) #19 rab11bb (ENSSLUG00000003397) #20 MARCHF2 (ENSSLUG00000003365) #21 slc25a36a (ENSSLUG00000003329) #22 spsb4a (ENSSLUG00000003305) #23 clstn2a (ENSSLUG00000001936) #25 NMNAT3 (ENSSLUG00000001488) #26 rbp1.1 (ENSSLUG00000001482) #27 rbp2b (ENSSLUG00000024153) #28 copb2 (ENSSLUG00000023763) #29 dvl3a (ENSSLUG00000023682) #30 ap2m1a (ENSSLUG00000023669) #31 pcyt1aa (ENSSLUG00000023650) #32 and3 (ENSSLUG00000023638) #33 DYNC1I2 (ENSSLUG00000021578) #34 slc25a12 (ENSSLUG00000019402) #35 metap1d (ENSSLUG00000019296) #36 ENSSLUG00000018774 #37 rapgef4b (ENSSLUG00000018395) Channel bull blenny MODERN SPECIES 8 ENSCGOG00000018385 #7 pik3r2 (ENSCGOG00000017734) #8 ifi30 (ENSCGOG00000017696) #9 ENSCGOG00000015645 #10 jund (ENSCGOG00000015574) #12 RAB3A (ENSCGOG00000015547) #11 pgpep1 (ENSCGOG00000015544) #13 upf1 (ENSCGOG00000015291) #14 HOMER3 (ENSCGOG00000015280) #15 uba52 (ENSCGOG00000015279) ##16 ENSCGOG00000015260 #17 CTXN1 (ENSCGOG00000015256) #18 TIMM44 (ENSCGOG00000014872) #19 rab11bb (ENSCGOG00000014861) #20 MARCHF2 (ENSCGOG00000014860) #21 slc25a36a (ENSCGOG00000014854) #22 spsb4a (ENSCGOG00000014851) #23 clstn2a (ENSCGOG00000014188) #25 NMNAT3 (ENSCGOG00000014162) #26 rbp1.1 (ENSCGOG00000014153) #27 rbp2b (ENSCGOG00000014126) #28 copb2 (ENSCGOG00000013176) #29 dvl3a (ENSCGOG00000012594) #30 ap2m1a (ENSCGOG00000012546) #31 pcyt1aa (ENSCGOG00000012307) #32 and3 (ENSCGOG00000012296) #33 ENSCGOG00000010097 #34 slc25a12 (ENSCGOG00000022233) #35 metap1d (ENSCGOG00000022166) #36 ITGA6 (ENSCGOG00000021796) #37 ENSCGOG00000021769 Eupecaria_C ANCESTRAL SPECIES 10 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Gilthead seabream MODERN SPECIES 13 pard3ab (ENSSAUG00010023401) NRP1 (ENSSAUG00010023216) itgb1b (ENSSAUG00010019402) ENSSAUG00010019344 ENSSAUG00010019339 ENSSAUG00010019336 ENSSAUG00010019331 arhgap12b (ENSSAUG00010016958) ENSSAUG00010016918 KIF5B (ENSSAUG00010013793) pold3 (ENSSAUG00010013750) ENSSAUG00010013200 CTXN1 (ENSSAUG00010013180) #18 rab11bb (ENSSAUG00010013144) #20 TIMM44 (ENSSAUG00010012552) #19 slc25a36a (ENSSAUG00010012537) #22 spsb4a (ENSSAUG00010012534) #23 clstn2a (ENSSAUG00010027604) #25 NMNAT3 (ENSSAUG00010027602) #26 rbp1.1 (ENSSAUG00010027601) #27 rbp2b (ENSSAUG00010027600) #28 copb2 (ENSSAUG00010027590) #29 dvl3a (ENSSAUG00010027548) #30 ap2m1a (ENSSAUG00010027545) #31 pcyt1aa (ENSSAUG00010027543) #32 and3 (ENSSAUG00010027542) #33 DYNC1I2 (ENSSAUG00010027523) #34 slc25a12 (ENSSAUG00010027446) #35 metap1d (ENSSAUG00010027416) #36 itga6b (ENSSAUG00010027382) #37 ENSSAUG00010027365 Eupercaria_incertae_sedis ANCESTRAL SPECIES 8 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Large yellow croaker MODERN SPECIES 483 ENSLCRG00005023658 #7 pik3r2 (ENSLCRG00005023647) #8 ifi30 (ENSLCRG00005023645) #9 ENSLCRG00005023641 #10 RAB3A (ENSLCRG00005023639) #11 jund (ENSLCRG00005023638) #12 pgpep1 (ENSLCRG00005023637) #13 upf1 (ENSLCRG00005023597) #14 HOMER3 (ENSLCRG00005023593) #15 uba52 (ENSLCRG00005023591) #16 ENSLCRG00005023590 #17 ENSLCRG00005023589 #18 TIMM44 (ENSLCRG00005023576) #19 rab11bb (ENSLCRG00005023575) #20 MARCHF2 (ENSLCRG00005023574) #21 slc25a36a (ENSLCRG00005023573) #22 zgc:136870 (ENSLCRG00005023572) #24 spsb4a (ENSLCRG00005023571) #23 clstn2a (ENSLCRG00005023521) #25 NMNAT3 (ENSLCRG00005023515) #26 rbp1.1 (ENSLCRG00005023514) #27 rbp2b (ENSLCRG00005023513) #28 copb2 (ENSLCRG00005023427) #29 dvl3a (ENSLCRG00005023423) #30 ap2m1a (ENSLCRG00005023420) #31 pcyt1aa (ENSLCRG00005023416) #32 and3 (ENSLCRG00005023413) #33 DYNC1I2 (ENSLCRG00005022746) #34 slc25a12 (ENSLCRG00005022120) #35 metap1d (ENSLCRG00005022102) #36 itga6b (ENSLCRG00005021995) #37 European seabass MODERN SPECIES crtc1a (ENSDLAG00005011972) ENSDLAG00005002544 ENSDLAG00005002659 #7 pik3r2 (ENSDLAG00005003340) #8 ifi30 (ENSDLAG00005003806) #9 ENSDLAG00005003922 #10 ENSDLAG00005026750 #11 jund (ENSDLAG00005033524) #12 upf1 (ENSDLAG00005005647) #14 ENSDLAG00005006531 #15 ENSDLAG00005006568 #17 ENSDLAG00005006586 #18 ENSDLAG00005031877 #19 rab11bb (ENSDLAG00005006977) #20 ENSDLAG00005007195 #21 ENSDLAG00005007214 #22 spsb4a (ENSDLAG00005007295) #23 zgc:136870 (ENSDLAG00005007302) #24 clstn2a (ENSDLAG00005007311) #25 NMNAT3 (ENSDLAG00005007373) #26 rbp1.1 (ENSDLAG00005027822) #27 rbp2b (ENSDLAG00005007381) #28 copb2 (ENSDLAG00005007428) #29 ENSDLAG00005008457 #30 ENSDLAG00005008772 #31 ENSDLAG00005008795 #32 ENSDLAG00005008952 #33 DYNC1I2 (ENSDLAG00005009088) #34 ENSDLAG00005012453 #35 metap1d (ENSDLAG00005014493) #36 itga6b (ENSDLAG00005014588) #37 Ovalentaria ANCESTRAL SPECIES 5 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.b ##10 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Atherinomorphae ANCESTRAL SPECIES 4 ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Cyprinodontiformes ANCESTRAL SPECIES 5 ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Aplocheiloidei ANCESTRAL SPECIES 19 ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Mangrove rivulus MODERN SPECIES 64 odr4 (ENSKMAG00000009510) TPR (ENSKMAG00000009412) dusp12 (ENSKMAG00000009384) ENSKMAG00000009357 OLFML2B (ENSKMAG00000009333) ENSKMAG00000009312 ENSKMAG00000009283 kifap3b (ENSKMAG00000009197) PDC (ENSKMAG00000009178) ENSKMAG00000009157 CERS4 (ENSKMAG00000009138) #17 CTXN1 (ENSKMAG00000009121) #18 TIMM44 (ENSKMAG00000009060) #19 rab11bb (ENSKMAG00000009033) #20 MARCHF2 (ENSKMAG00000009002) #21 slc25a36a (ENSKMAG00000008956) #22 spsb4a (ENSKMAG00000008932) #23 clstn2a (ENSKMAG00000008838) #25 NMNAT3 (ENSKMAG00000008800) #26 rbp1.1 (ENSKMAG00000008788) #27 rbp2b (ENSKMAG00000008760) #28 copb2 (ENSKMAG00000008663) #29 dvl3a (ENSKMAG00000008628) #30 ap2m1a (ENSKMAG00000008592) #31 pcyt1aa (ENSKMAG00000008554) #32 ENSKMAG00000008520 DYNC1I2 (ENSKMAG00000008383) #34 slc25a12 (ENSKMAG00000008292) #35 metap1d (ENSKMAG00000008227) #36 itga6b (ENSKMAG00000008162) #37 ENSKMAG00000008097 Turquoise killifish MODERN SPECIES 1618 PTBP2B (ENSNFUG00015023143) dpydb (ENSNFUG00015023011) C2H1ORF27 (ENSNFUG00015023001) TPRA (ENSNFUG00015021506) prg4a (ENSNFUG00015021413) dusp12 (ENSNFUG00015021389) OLFML2BB (ENSNFUG00015021376) ENSNFUG00015021367 KIFAP3B (ENSNFUG00015020250) OLPD-R (ENSNFUG00015020202) CERS4 (ENSNFUG00015020174) #17 CTXN1 (ENSNFUG00015020167) #18 TIMM44 (ENSNFUG00015020126) #19 Nfu_g_1_020481 (ENSNFUG00015020092) #20 MARCH2 (ENSNFUG00015020081) #21 slc25a36a (ENSNFUG00015020070) #22 SPSB4 (ENSNFUG00015020062) #23 clstn2a (ENSNFUG00015019721) #25 NMNAT3 (ENSNFUG00015019677) #26 NMNAT3 (ENSNFUG00015019671) #27 rbp2b (ENSNFUG00015019621) #28 COPB2 (ENSNFUG00015018238) #29 dvl3a (ENSNFUG00015017928) #30 ENSNFUG00015017891 LINGO3 (ENSNFUG00015017886) ONECUT3 (ENSNFUG00015017880) tcf3a (ENSNFUG00015017863) UQCR11 (ENSNFUG00015017854) mbd3a (ENSNFUG00015017839) MEX3D (ENSNFUG00015017831) BTBD2 (ENSNFUG00015016901) Cyprinodontoidei ANCESTRAL SPECIES 2 ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b.g #37 ENSGT00940000155353.a.a.b.h #37 ENSGT00940000164127.b NAME_4 ANCESTRAL SPECIES 9 ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b.g #37 ENSGT00940000155353.a.a.b.h #37 ENSGT00940000164127.b Mummichog MODERN SPECIES 2326 ENSFHEG00000018261 #17 CTXN1 (ENSFHEG00000018270) #18 TIMM44 (ENSFHEG00000018339) #19 rab11bb (ENSFHEG00000018353) #20 MARCHF2 (ENSFHEG00000018375) #21 slc25a36a (ENSFHEG00000018399) #22 spsb4a (ENSFHEG00000018422) #23 clstn2a (ENSFHEG00000018475) #25 NMNAT3 (ENSFHEG00000018505) #26 rbp1.1 (ENSFHEG00000018522) #27 copb2 (ENSFHEG00000018594) #29 dvl3a (ENSFHEG00000018651) #30 ap2m1a (ENSFHEG00000018703) #31 pcyt1aa (ENSFHEG00000018749) #32 and3 (ENSFHEG00000018762) #33 DYNC1I2 (ENSFHEG00000018845) #34 slc25a12 (ENSFHEG00000018890) #35 metap1d (ENSFHEG00000018950) #36 itga6b (ENSFHEG00000019221) #37 ENSFHEG00000019239 rapgef4b (ENSFHEG00000019375) Sheepshead minnow MODERN SPECIES 336 rab2a (ENSCVAG00000017623) CHD7 (ENSCVAG00000017584) ptbp2b (ENSCVAG00000017566) dpydb (ENSCVAG00000017559) odr4 (ENSCVAG00000017457) TPR (ENSCVAG00000017444) dusp12 (ENSCVAG00000017311) OLFML2B (ENSCVAG00000017284) ENSCVAG00000017271 kifap3b (ENSCVAG00000017254) PDC (ENSCVAG00000017136) ENSCVAG00000017123 #17 TIMM44 (ENSCVAG00000017060) #19 rab11bb (ENSCVAG00000017021) #20 MARCHF2 (ENSCVAG00000016997) #21 slc25a36a (ENSCVAG00000016985) #22 ENSCVAG00000016936 spsb4a (ENSCVAG00000016921) #23 clstn2a (ENSCVAG00000016907) #25 ENSCVAG00000016794 #26 Poeciliinae ANCESTRAL SPECIES 6 ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b.g #37 ENSGT00940000155353.a.a.b.h #37 ENSGT00940000164127.b Poecilia ANCESTRAL SPECIES 19 ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b.g #37 ENSGT00940000155353.a.a.b.h #37 ENSGT00940000164127.b NAME_6 ANCESTRAL SPECIES 228 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b.g #37 ENSGT00940000155353.a.a.b.h #37 ENSGT00940000164127.b Amazon molly MODERN SPECIES 422 rab2a (ENSPFOG00000004786) CHD7 (ENSPFOG00000004891) ptbp2b (ENSPFOG00000005646) dpydb (ENSPFOG00000005785) odr4 (ENSPFOG00000005978) ENSPFOG00000006006 prg4a (ENSPFOG00000006768) dusp12 (ENSPFOG00000006822) ENSPFOG00000020348 OLFML2B (ENSPFOG00000006875) ENSPFOG00000006956 CERS4 (ENSPFOG00000007021) #17 TIMM44 (ENSPFOG00000007215) #19 rab11bb (ENSPFOG00000024114) #20 MARCHF2 (ENSPFOG00000007476) #21 slc25a36a (ENSPFOG00000007512) #22 spsb4a (ENSPFOG00000007613) #23 clstn2a (ENSPFOG00000007644) #25 NMNAT3 (ENSPFOG00000008559) #26 rbp1.1 (ENSPFOG00000023452) #27 copb2 (ENSPFOG00000008606) #29 dvl3a (ENSPFOG00000008888) #30 ap2m1a (ENSPFOG00000009058) #31 pcyt1aa (ENSPFOG00000009131) #32 and3 (ENSPFOG00000009203) #33 DYNC1I2 (ENSPFOG00000009232) #34 slc25a12 (ENSPFOG00000009599) #35 metap1d (ENSPFOG00000009936) #36 itga6b (ENSPFOG00000010117) #37 ENSPFOG00000010742 rapgef4b (ENSPFOG00000010884) Sailfin molly MODERN SPECIES 1959 ENSPLAG00000001628 #17 CTXN1 (ENSPLAG00000001608) #18 TIMM44 (ENSPLAG00000001606) #19 rab11bb (ENSPLAG00000001598) #20 MARCHF2 (ENSPLAG00000001587) #21 slc25a36a (ENSPLAG00000001581) #22 Platyfish MODERN SPECIES 20 dpydb (ENSXMAG00000018645) odr4 (ENSXMAG00000018668) TPR (ENSXMAG00000018684) prg4a (ENSXMAG00000018717) dusp12 (ENSXMAG00000018722) ENSXMAG00000027606 OLFML2B (ENSXMAG00000018729) ENSXMAG00000026629 kifap3b (ENSXMAG00000018739) PDC (ENSXMAG00000018762) ENSXMAG00000018778 #17 CTXN1 (ENSXMAG00000026623) #18 TIMM44 (ENSXMAG00000018819) #19 rab11bb (ENSXMAG00000011926) #20 MARCHF2 (ENSXMAG00000018861) #21 slc25a36a (ENSXMAG00000018866) #22 spsb4a (ENSXMAG00000018887) #23 clstn2a (ENSXMAG00000018890) #25 NMNAT3 (ENSXMAG00000018929) #26 rbp1.1 (ENSXMAG00000018933) #27 copb2 (ENSXMAG00000018937) #29 dvl3a (ENSXMAG00000018981) #30 ap2m1a (ENSXMAG00000019001) #31 pcyt1aa (ENSXMAG00000019014) #32 and3 (ENSXMAG00000019029) #33 DYNC1I2 (ENSXMAG00000019032) #34 slc25a12 (ENSXMAG00000019058) #35 metap1d (ENSXMAG00000019080) #36 itga6b (ENSXMAG00000019094) #37 itga6b (ENSXMAG00000024556) #37 ENSXMAG00000019139 Oryzias ANCESTRAL SPECIES 12 ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Oryzias_b ANCESTRAL SPECIES 8 ENSGT00940000153649.A ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b #17 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Indian medaka MODERN SPECIES 10 CHD7 (ENSOMEG00000016881) ptbp2b (ENSOMEG00000016950) dpydb (ENSOMEG00000017058) odr4 (ENSOMEG00000017193) ENSOMEG00000017267 prg4a (ENSOMEG00000017284) ENSOMEG00000017301 dusp12 (ENSOMEG00000017380) ENSOMEG00000017421 kifap3b (ENSOMEG00000017545) PDC (ENSOMEG00000017603) ENSOMEG00000017667 #17 TIMM44 (ENSOMEG00000017767) #19 rab11bb (ENSOMEG00000017806) #20 MARCHF2 (ENSOMEG00000017834) #21 slc25a36a (ENSOMEG00000017859) #22 spsb4a (ENSOMEG00000017906) #23 clstn2a (ENSOMEG00000017977) #25 NMNAT3 (ENSOMEG00000018039) #26 rbp1.1 (ENSOMEG00000018083) #27 rbp2b (ENSOMEG00000018095) #28 copb2 (ENSOMEG00000018165) #29 dvl3a (ENSOMEG00000018321) #30 ap2m1a (ENSOMEG00000018414) #31 pcyt1aa (ENSOMEG00000018447) #32 and3 (ENSOMEG00000018463) #33 DYNC1I2 (ENSOMEG00000018565) #34 slc25a12 (ENSOMEG00000018711) #35 metap1d (ENSOMEG00000000484) #36 itga6b (ENSOMEG00000018880) #37 ENSOMEG00000018948 Javanese ricefish MODERN SPECIES 8 ca8 (ENSOJAG00000022960) rab2a (ENSOJAG00000022968) ptbp2b (ENSOJAG00000009624) odr4 (ENSOJAG00000011649) TPR (ENSOJAG00000011778) prg4a (ENSOJAG00000014427) dusp12 (ENSOJAG00000014454) OLFML2B (ENSOJAG00000014470) ENSOJAG00000014489 kifap3b (ENSOJAG00000014522) PDC (ENSOJAG00000014844) ENSOJAG00000014871 #17 TIMM44 (ENSOJAG00000014954) #19 rab11bb (ENSOJAG00000015481) #20 MARCHF2 (ENSOJAG00000015558) #21 slc25a36a (ENSOJAG00000015573) #22 spsb4a (ENSOJAG00000015580) #23 clstn2a (ENSOJAG00000015617) #25 NMNAT3 (ENSOJAG00000016137) #26 rbp1.1 (ENSOJAG00000016154) #27 rbp2b (ENSOJAG00000016169) #28 copb2 (ENSOJAG00000016214) #29 dvl3a (ENSOJAG00000017146) #30 ap2m1a (ENSOJAG00000017316) #31 pcyt1aa (ENSOJAG00000017391) #32 and3 (ENSOJAG00000017410) #33 DYNC1I2 (ENSOJAG00000017447) #34 slc25a12 (ENSOJAG00000018766) #35 metap1d (ENSOJAG00000020200) #36 itga6b (ENSOJAG00000020267) #37 ENSOJAG00000020498 Oryzias_a ANCESTRAL SPECIES 7 ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Chinese medaka MODERN SPECIES 522 CHD7 (ENSOSIG00000012096) ptbp2b (ENSOSIG00000012898) dpydb (ENSOSIG00000017085) TPR (ENSOSIG00000017181) prg4a (ENSOSIG00000017475) dusp12 (ENSOSIG00000017483) OLFML2B (ENSOSIG00000017493) ENSOSIG00000017499 kifap3b (ENSOSIG00000017501) PDC (ENSOSIG00000017506) ENSOSIG00000017515 #17 TIMM44 (ENSOSIG00000017570) #19 ENSOSIG00000017572 rab11bb (ENSOSIG00000017577) #20 MARCHF2 (ENSOSIG00000017579) #21 slc25a36a (ENSOSIG00000017582) #22 spsb4a (ENSOSIG00000017585) #23 clstn2a (ENSOSIG00000017760) #25 NMNAT3 (ENSOSIG00000020465) #26 rbp1.1 (ENSOSIG00000020468) #27 rbp2b (ENSOSIG00000020472) #28 copb2 (ENSOSIG00000020483) #29 dvl3a (ENSOSIG00000020491) #30 ap2m1a (ENSOSIG00000020528) #31 pcyt1aa (ENSOSIG00000020532) #32 and3 (ENSOSIG00000020533) #33 DYNC1I2 (ENSOSIG00000020580) #34 slc25a12 (ENSOSIG00000022063) #35 metap1d (ENSOSIG00000022361) #36 itga6b (ENSOSIG00000022367) #37 ENSOSIG00000022372 Japanese Medaka HdrR MODERN SPECIES 8 ptbp2b (ENSORLG00000013557) dpydb (ENSORLG00000013626) odr4 (ENSORLG00000013679) ENSORLG00000013763 prg4a (ENSORLG00000013785) dusp12 (ENSORLG00000013816) ENSORLG00000013860 ENSORLG00000024886 kifap3b (ENSORLG00000013884) pdca (ENSORLG00000013896) ENSORLG00000013903 #17 ENSORLG00000026451 #18 TIMM44 (ENSORLG00000013927) #19 rab11bb (ENSORLG00000013938) #20 ENSORLG00000013951 #21 slc25a36a (ENSORLG00000013978) #22 spsb4a (ENSORLG00000013981) #23 ENSORLG00000026151 #26 clstn2a (ENSORLG00000022231) #25 rbp2b (ENSORLG00000028914) #28 rbp1.1 (ENSORLG00000014005) #27 copb2 (ENSORLG00000014074) #29 dvl3a (ENSORLG00000014122) #30 ap2m1a (ENSORLG00000014164) #31 pcyt1aa (ENSORLG00000014200) #32 and3 (ENSORLG00000014208) #33 DYNC1I2 (ENSORLG00000014246) #34 slc25a12 (ENSORLG00000014305) #35 metap1d (ENSORLG00000014320) #36 itga6b (ENSORLG00000014364) #37 ENSORLG00000014379 Ovalentaria_B ANCESTRAL SPECIES 6 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.b ##10 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Cichlidae ANCESTRAL SPECIES 2 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.b ##10 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Pseudocrenilabrinae ANCESTRAL SPECIES 7 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.b ##10 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 4 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.b ##10 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000181786 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Haplochromini ANCESTRAL SPECIES 2 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.b ##10 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000181786 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Burton s mouthbrooder MODERN SPECIES 306 ENSHBUG00000011494 ENSHBUG00000014224 #7 pik3r2 (ENSHBUG00000014380) #8 ifi30 (ENSHBUG00000014409) #9 ENSHBUG00000014429 #10 RAB3A (ENSHBUG00000014437) #11 jund (ENSHBUG00000014447) #12 pgpep1 (ENSHBUG00000000426) #13 upf1 (ENSHBUG00000014694) #14 ENSHBUG00000014718 HOMER3 (ENSHBUG00000014740) #15 ENSHBUG00000014765 #17 TIMM44 (ENSHBUG00000014769) #19 rab11bb (ENSHBUG00000014777) #20 MARCHF2 (ENSHBUG00000000436) #21 slc25a36a (ENSHBUG00000014826) #22 zgc:136870 (ENSHBUG00000014834) #24 spsb4a (ENSHBUG00000014842) #23 clstn2a (ENSHBUG00000014896) #25 NMNAT3 (ENSHBUG00000014910) #26 rbp1.1 (ENSHBUG00000014944) #27 rbp2b (ENSHBUG00000014989) #28 copb2 (ENSHBUG00000015177) #29 dvl3a (ENSHBUG00000015268) #30 ap2m1a (ENSHBUG00000015302) #31 pcyt1aa (ENSHBUG00000015337) #32 DYNC1I2 (ENSHBUG00000015379) #34 slc25a12 (ENSHBUG00000000996) #35 metap1d (ENSHBUG00000015543) #36 itga6b (ENSHBUG00000000452) #37 ENSHBUG00000015594 Haplochromini_A ANCESTRAL SPECIES 3 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.b ##10 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b P. nyererei MODERN SPECIES 299 ENSPNYG00000003345 #7 pik3r2 (ENSPNYG00000003416) #8 ifi30 (ENSPNYG00000003489) #9 ENSPNYG00000003518 ##10 ENSPNYG00000003553 #10 RAB3A (ENSPNYG00000003624) #11 jund (ENSPNYG00000003650) #12 pgpep1 (ENSPNYG00000003672) #13 upf1 (ENSPNYG00000003694) #14 HOMER3 (ENSPNYG00000003778) #15 ENSPNYG00000003807 #17 uba52 (ENSPNYG00000003911) #16 TIMM44 (ENSPNYG00000004070) #19 rab11bb (ENSPNYG00000004098) #20 MARCHF2 (ENSPNYG00000004130) #21 slc25a36a (ENSPNYG00000004157) #22 spsb4a (ENSPNYG00000004191) #23 zgc:136870 (ENSPNYG00000004207) #24 clstn2a (ENSPNYG00000004231) #25 NMNAT3 (ENSPNYG00000004294) #26 rbp1.1 (ENSPNYG00000004312) #27 rbp2b (ENSPNYG00000004334) #28 copb2 (ENSPNYG00000004364) #29 dvl3a (ENSPNYG00000004421) #30 ap2m1a (ENSPNYG00000004468) #31 pcyt1aa (ENSPNYG00000004498) #32 DYNC1I2 (ENSPNYG00000004520) #34 slc25a12 (ENSPNYG00000004566) #35 metap1d (ENSPNYG00000004632) #36 itga6b (ENSPNYG00000004683) #37 ENSPNYG00000004709 Haplochromini_B ANCESTRAL SPECIES 12 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT01030000234515.a.b.b.b #17 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT01030000234629.C.a #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00940000155442.o.a #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 ENSGT00940000164127.b Eastern happy MODERN SPECIES 9 crtc1a (ENSACLG00000007997) ENSACLG00000007990 ENSACLG00000007576 #7 pik3r2 (ENSACLG00000007541) #8 ifi30 (ENSACLG00000007526) #9 ENSACLG00000007240 #10 RAB3A (ENSACLG00000007231) #11 jund (ENSACLG00000007226) #12 pgpep1 (ENSACLG00000007217) #13 upf1 (ENSACLG00000007181) #14 HOMER3 (ENSACLG00000007133) #15 CERS4 (ENSACLG00000007099) #17 TIMM44 (ENSACLG00000007080) #19 rab11bb (ENSACLG00000007076) #20 MARCHF2 (ENSACLG00000007071) #21 slc25a36a (ENSACLG00000007062) #22 zgc:136870 (ENSACLG00000007054) #24 spsb4a (ENSACLG00000007040) #23 clstn2a (ENSACLG00000006605) #25 NMNAT3 (ENSACLG00000006594) #26 rbp1.1 (ENSACLG00000006586) #27 rbp2b (ENSACLG00000006428) #28 copb2 (ENSACLG00000006378) #29 dvl3a (ENSACLG00000006365) #30 ap2m1a (ENSACLG00000006350) #31 pcyt1aa (ENSACLG00000006334) #32 DYNC1I2 (ENSACLG00000006306) #34 slc25a12 (ENSACLG00000006243) #35 metap1d (ENSACLG00000006206) #36 itga6b (ENSACLG00000005796) #37 ENSACLG00000005763 Zebra mbuna MODERN SPECIES 1100 ENSMZEG00005003826 ENSMZEG00005003753 #7 pik3r2 (ENSMZEG00005003704) #8 ifi30 (ENSMZEG00005003671) #9 ENSMZEG00005003607 #10 RAB3A (ENSMZEG00005003592) #11 jund (ENSMZEG00005003568) #12 pgpep1 (ENSMZEG00005003549) #13 upf1 (ENSMZEG00005003489) #14 HOMER3 (ENSMZEG00005003452) #15 ENSMZEG00005003430 CERS4 (ENSMZEG00005003420) #17 TIMM44 (ENSMZEG00005003361) #19 rab11bb (ENSMZEG00005003352) #20 MARCHF2 (ENSMZEG00005003339) #21 slc25a36a (ENSMZEG00005003295) #22 zgc:136870 (ENSMZEG00005003269) #24 spsb4a (ENSMZEG00005003260) #23 clstn2a (ENSMZEG00005003196) #25 NMNAT3 (ENSMZEG00005003102) #26 rbp1.1 (ENSMZEG00005003083) #27 rbp2b (ENSMZEG00005002902) #28 copb2 (ENSMZEG00005002832) #29 dvl3a (ENSMZEG00005002747) #30 ap2m1a (ENSMZEG00005002719) #31 pcyt1aa (ENSMZEG00005002705) #32 DYNC1I2 (ENSMZEG00005002671) #34 slc25a12 (ENSMZEG00005002619) #35 metap1d (ENSMZEG00005002593) #36 itga6b (ENSMZEG00005002565) #37 ENSMZEG00005002549 Lyretail cichlid MODERN SPECIES 300 ENSNBRG00000000988 #7 pik3r2 (ENSNBRG00000000914) #8 ifi30 (ENSNBRG00000000901) #9 ENSNBRG00000000846 #10 RAB3A (ENSNBRG00000000839) #11 jund (ENSNBRG00000000825) #12 pgpep1 (ENSNBRG00000000761) #13 upf1 (ENSNBRG00000000670) #14 ENSNBRG00000000632 HOMER3 (ENSNBRG00000000598) #15 uba52 (ENSNBRG00000000583) #16 CERS4 (ENSNBRG00000000500) #17 TIMM44 (ENSNBRG00000000376) #19 rab11bb (ENSNBRG00000000372) #20 MARCHF2 (ENSNBRG00000000345) #21 slc25a36a (ENSNBRG00000000318) #22 zgc:136870 (ENSNBRG00000022923) #24 spsb4a (ENSNBRG00000022916) #23 clstn2a (ENSNBRG00000022882) #25 NMNAT3 (ENSNBRG00000022863) #26 rbp1.1 (ENSNBRG00000022813) #27 rbp2b (ENSNBRG00000022801) #28 copb2 (ENSNBRG00000022777) #29 dvl3a (ENSNBRG00000022744) #30 ap2m1a (ENSNBRG00000022722) #31 pcyt1aa (ENSNBRG00000022706) #32 DYNC1I2 (ENSNBRG00000022681) #34 slc25a12 (ENSNBRG00000022645) #35 metap1d (ENSNBRG00000022632) #36 itga6b (ENSNBRG00000022386) #37 ENSNBRG00000022303 Nile tilapia MODERN SPECIES 9 ENSONIG00000010487 ENSONIG00000010481 #7 pik3r2 (ENSONIG00000010477) #8 ifi30 (ENSONIG00000010474) #9 ENSONIG00000010458 #10 RAB3A (ENSONIG00000040136) #11 jund (ENSONIG00000021437) #12 pgpep1 (ENSONIG00000035992) #13 upf1 (ENSONIG00000010452) #14 HOMER3 (ENSONIG00000010448) #15 ENSONIG00000031764 CERS4 (ENSONIG00000010441) #17 TIMM44 (ENSONIG00000010437) #19 ENSONIG00000035378 MARCHF2 (ENSONIG00000010434) #21 slc25a36a (ENSONIG00000010432) #22 spsb4a (ENSONIG00000010430) #23 ENSONIG00000043177 zgc:136870 (ENSONIG00000010431) #24 clstn2a (ENSONIG00000010418) #25 NMNAT3 (ENSONIG00000033479) #26 rbp2b (ENSONIG00000010410) #28 copb2 (ENSONIG00000042202) #29 dvl3a (ENSONIG00000010406) #30 ap2m1a (ENSONIG00000010404) #31 pcyt1aa (ENSONIG00000010401) #32 DYNC1I2 (ENSONIG00000010393) #34 slc25a12 (ENSONIG00000010386) #35 metap1d (ENSONIG00000010384) #36 itga6b (ENSONIG00000010374) #37 ENSONIG00000010372 Midas cichlid MODERN SPECIES 235 pik3r2 (ENSACIG00000020433) #8 IFI30 (ENSACIG00000020300) ENSACIG00000020265 #10 RAB3A (ENSACIG00000020019) #11 jund (ENSACIG00000020001) #12 pgpep1 (ENSACIG00000019992) #13 upf1 (ENSACIG00000019949) #14 lzic (ENSACIG00000019942) HOMER3 (ENSACIG00000019924) #15 uba52 (ENSACIG00000019707) #16 ENSACIG00000019677 #17 CTXN1 (ENSACIG00000019666) #18 TIMM44 (ENSACIG00000019644) #19 rab11bb (ENSACIG00000019631) #20 MARCHF2 (ENSACIG00000019618) #21 slc25a36a (ENSACIG00000019600) #22 zgc:136870 (ENSACIG00000019585) #24 spsb4a (ENSACIG00000019576) #23 ENSACIG00000019567 clstn2a (ENSACIG00000019526) #25 NMNAT3 (ENSACIG00000019503) #26 rbp1.1 (ENSACIG00000019416) #27 rbp2b (ENSACIG00000019401) #28 copb2 (ENSACIG00000019369) #29 dvl3a (ENSACIG00000019339) #30 ap2m1a (ENSACIG00000019325) #31 pcyt1aa (ENSACIG00000019309) #32 ENSACIG00000019302 DYNC1I2 (ENSACIG00000019284) #34 slc25a12 (ENSACIG00000019271) #35 metap1d (ENSACIG00000019257) #36 Pomacentridae ANCESTRAL SPECIES 6 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Pomacentridae_A ANCESTRAL SPECIES 18 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Amphiprion ANCESTRAL SPECIES 56 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.b #11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00390000005067.b #33 ENSGT00940000155442.o #34 ENSGT00940000155963.e #35 ENSGT00940000157735 #36 ENSGT00940000155353.a.a.b #37 Orange clownfish MODERN SPECIES 1 ENSAPEG00000016073 #7 pik3r2 (ENSAPEG00000016119) #8 ifi30 (ENSAPEG00000016204) #9 ENSAPEG00000016224 #10 RAB3A (ENSAPEG00000016297) #11 jund (ENSAPEG00000016308) #12 pgpep1 (ENSAPEG00000016314) #13 upf1 (ENSAPEG00000016344) #14 HOMER3 (ENSAPEG00000016482) #15 uba52 (ENSAPEG00000016505) #16 ENSAPEG00000016515 #17 CTXN1 (ENSAPEG00000016527) #18 TIMM44 (ENSAPEG00000016535) #19 rab11bb (ENSAPEG00000016590) #20 MARCHF2 (ENSAPEG00000016600) #21 slc25a36a (ENSAPEG00000016623) #22 spsb4a (ENSAPEG00000016656) #23 zgc:136870 (ENSAPEG00000016668) #24 clstn2a (ENSAPEG00000016707) #25 NMNAT3 (ENSAPEG00000016768) #26 rbp1.1 (ENSAPEG00000016783) #27 rbp2b (ENSAPEG00000016791) #28 copb2 (ENSAPEG00000016809) #29 dvl3a (ENSAPEG00000016879) #30 ap2m1a (ENSAPEG00000016947) #31 pcyt1aa (ENSAPEG00000016980) #32 and3 (ENSAPEG00000016994) #33 DYNC1I2 (ENSAPEG00000017015) #34 slc25a12 (ENSAPEG00000017081) #35 metap1d (ENSAPEG00000017137) #36 itga6b (ENSAPEG00000017165) #37 Clown anemonefish MODERN SPECIES 694 pik3r2 (ENSAOCG00000001345) #8 ifi30 (ENSAOCG00000018652) #9 ENSAOCG00000018626 #10 ENSAOCG00000001336 #10 RAB3A (ENSAOCG00000018573) #11 jund (ENSAOCG00000018564) #12 pgpep1 (ENSAOCG00000018549) #13 upf1 (ENSAOCG00000018519) #14 HOMER3 (ENSAOCG00000018407) #15 uba52 (ENSAOCG00000018365) #16 ENSAOCG00000018339 #17 CTXN1 (ENSAOCG00000018267) #18 TIMM44 (ENSAOCG00000018254) #19 rab11bb (ENSAOCG00000018239) #20 MARCHF2 (ENSAOCG00000018227) #21 slc25a36a (ENSAOCG00000018206) #22 Spiny chromis MODERN SPECIES 158 myl1 (ENSAPOG00000024090) ENSAPOG00000024069 pik3r2 (ENSAPOG00000024009) #8 ifi30 (ENSAPOG00000023955) #9 ENSAPOG00000023917 #10 RAB3A (ENSAPOG00000000673) #11 jund (ENSAPOG00000023818) #12 pgpep1 (ENSAPOG00000023806) #13 upf1 (ENSAPOG00000023773) #14 HOMER3 (ENSAPOG00000023680) #15 ENSAPOG00000023625 #17 CTXN1 (ENSAPOG00000023565) #18 TIMM44 (ENSAPOG00000023542) #19 rab11bb (ENSAPOG00000023455) #20 MARCHF2 (ENSAPOG00000023418) #21 slc25a36a (ENSAPOG00000023367) #22 spsb4a (ENSAPOG00000023306) #23 zgc:136870 (ENSAPOG00000023257) #24 clstn2a (ENSAPOG00000023252) #25 Bicolor damselfish MODERN SPECIES 1215 ENSSPAG00000011357 #17 CTXN1 (ENSSPAG00000011381) #18 TIMM44 (ENSSPAG00000011387) #19 rab11bb (ENSSPAG00000011419) #20 MARCHF2 (ENSSPAG00000011441) #21 slc25a36a (ENSSPAG00000011459) #22 spsb4a (ENSSPAG00000011489) #23 zgc:136870 (ENSSPAG00000011499) #24 pbdc1 (ENSSPAG00000011515) xpo7 (ENSSPAG00000011560) Tiger tail seahorse MODERN SPECIES 377 si:dkey-56i24.1 (ENSHCOG00000001857) ENSHCOG00000001877 #7 pik3r2 (ENSHCOG00000001948) #8 ifi30 (ENSHCOG00000001984) #9 ENSHCOG00000002081 #10 RAB3A (ENSHCOG00000002125) #11 jund (ENSHCOG00000002134) #12 ENSHCOG00000002184 #15 ENSHCOG00000002352 #17 CTXN1 (ENSHCOG00000002404) #18 rab11bb (ENSHCOG00000002423) #20 MARCHF2 (ENSHCOG00000002433) #21 slc25a36a (ENSHCOG00000002442) #22 spsb4a (ENSHCOG00000002448) #23 clstn2a (ENSHCOG00000002473) #25 NMNAT3 (ENSHCOG00000002482) #26 rbp1.1 (ENSHCOG00000000700) #27 Pinecone sodierfish MODERN SPECIES 8 MAST3 (ENSMMDG00005014384) #7 pik3r2 (ENSMMDG00005014416) #8 ifi30 (ENSMMDG00005015289) #9 ENSMMDG00005015290 #10 RAB3A (ENSMMDG00005015295) #11 jund (ENSMMDG00005015297) #12 pgpep1 (ENSMMDG00005015307) #13 upf1 (ENSMMDG00005015515) #14 HOMER3 (ENSMMDG00005016621) #15 uba52 (ENSMMDG00005016682) #16 ENSMMDG00005016688 #17 CTXN1 (ENSMMDG00005016693) #18 TIMM44 (ENSMMDG00005016705) #19 rab11bb (ENSMMDG00005016770) #20 MARCHF2 (ENSMMDG00005016775) #21 slc25a36a (ENSMMDG00005016779) #22 spsb4a (ENSMMDG00005016781) #23 zgc:136870 (ENSMMDG00005016783) #24 clstn2a (ENSMMDG00005016797) #25 ENSMMDG00005016891 NMNAT3 (ENSMMDG00005016893) #26 rbp1.1 (ENSMMDG00005016895) #27 rbp2b (ENSMMDG00005016897) #28 copb2 (ENSMMDG00005016919) #29 dvl3a (ENSMMDG00005018119) #30 ap2m1a (ENSMMDG00005018230) #31 pcyt1aa (ENSMMDG00005018238) #32 and3 (ENSMMDG00005018246) #33 DYNC1I2 (ENSMMDG00005018308) #34 slc25a12 (ENSMMDG00005021392) #35 metap1d (ENSMMDG00005021571) #36 Cod MODERN SPECIES 21 crtc1a (ENSGMOG00000010220) ENSGMOG00000027994 pik3r2 (ENSGMOG00000010166) #8 ifi30 (ENSGMOG00000010157) #9 ENSGMOG00000000694 #10 ENSGMOG00000000685 #11 ENSGMOG00000000668 #13 ENSGMOG00000024170 #15 ENSGMOG00000018197 #17 ENSGMOG00000010623 #19 ENSGMOG00000027799 ENSGMOG00000028248 ENSGMOG00000031425 ENSGMOG00000009211 ##20 ENSGMOG00000009200 #21 slc25a36a (ENSGMOG00000023978) #22 spsb4a (ENSGMOG00000034486) #23 clstn2a (ENSGMOG00000009159) #25 NMNAT3 (ENSGMOG00000007890) #26 rbp1.1 (ENSGMOG00000026517) #27 rbp2b (ENSGMOG00000035830) #28 copb2 (ENSGMOG00000007877) #29 ENSGMOG00000007864 #30 ENSGMOG00000007857 ##31 ENSGMOG00000007851 #32 ENSGMOG00000025298 #33 DYNC1I2 (ENSGMOG00000018897) #34 ENSGMOG00000018887 #35 metap1d (ENSGMOG00000018879) #36 itga6b (ENSGMOG00000018855) #37 ENSGMOG00000033645 Protacanthopterygii ANCESTRAL SPECIES 60 ENSGT00940000157166.d #7 ENSGT00940000157050.i.a #8 ENSGT00940000164804.a #9 ENSGT00940000164492.a.a #10 ENSGT00940000158959.a.a.a ##11 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.c #13 ENSGT00940000157413.h #14 ENSGT00940000158081.o.b #15 ENSGT00940000153593.e.b #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b #19 ENSGT00940000163126.a.a #20 ENSGT00940000158995.b #21 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182903.a.a.d #30 ENSGT00940000159223.d #31 ENSGT00940000157384.a #32 ENSGT00940000161729.m.a ENSGT00390000011725.d ENSGT00940000153655.A.b ENSGT00390000011127.d ENSGT00390000016906.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 83 ENSGT00940000157166.d.d #7 ENSGT00940000157050.i.a.d #8 ENSGT00940000164804.a.e #9 ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e #10 ENSGT00940000158959.a.a.a.a ##11 ENSGT00940000162806.b.a.g #12 ENSGT00390000015368.a.a.c.h #13 ENSGT00940000157413.h.b #14 ENSGT00940000158081.o.b.c #15 ENSGT00940000153593.e.b.g.a #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00390000000051.b.b #19 ENSGT00940000163126.a.a.c #20 ENSGT00940000158995.b.a #21 ENSGT00940000154369.g.a.g #22 ENSGT01030000234629.C.a.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b.c #25 ENSGT00940000159675.b #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a.b #29 ENSGT00950000182903.a.a.d.f #30 ENSGT00940000159223.d.b #31 ENSGT00940000157384.a.c #32 ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y ENSGT00390000011127.d.c ENSGT00990000213680 ENSGT00940000174564.f Salmoninae_a ANCESTRAL SPECIES 2 ENSGT00940000157166.d.d #7 ENSGT00940000157050.i.a.d #8 ENSGT00940000164804.a.e #9 ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e #10 ENSGT00940000158959.a.a.a.a ##11 ENSGT00940000162806.b.a.g #12 ENSGT00390000015368.a.a.c.h #13 ENSGT00940000157413.h.b #14 ENSGT00940000158081.o.b.c #15 ENSGT00940000153593.e.b.g.b.b.a #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00390000000051.b.b #19 ENSGT00940000163126.a.a.c #20 ENSGT00940000158995.b.a #21 ENSGT00940000154369.g.a.g #22 ENSGT01030000234629.C.a.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b.c #25 ENSGT00940000159675.b #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a.b #29 ENSGT00950000182903.a.a.d.f #30 ENSGT00940000159223.d.b #31 ENSGT00940000157384.a.c #32 ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y ENSGT00390000011127.d.c ENSGT00990000213680 ENSGT00940000174564.f Oncorhynchus ANCESTRAL SPECIES 11 ENSGT00940000157166.d.d #7 ENSGT00940000157050.i.a.d #8 ENSGT00940000164804.a.e #9 ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e #10 ENSGT00940000158959.a.a.a.a ##11 ENSGT00940000162806.b.a.g #12 ENSGT00390000015368.a.a.c.h #13 ENSGT00940000157413.h.b #14 ENSGT00940000158081.o.b.c #15 ENSGT00940000153593.f ##16 ENSGT01030000234515.a.b.b.b #17 ENSGT00390000000051.b.b #19 ENSGT00940000163126.a.a.c #20 ENSGT00940000158995.b.a #21 ENSGT00940000154369.g.a.g #22 ENSGT01030000234629.C.a.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b.c #25 ENSGT00940000159675.b #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a.b #29 ENSGT00950000182903.a.a.d.f #30 ENSGT00940000159223.d.b #31 ENSGT00940000157384.a.c #32 ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y ENSGT00390000011127.d.c ENSGT00940000174564.f ENSGT00940000157030.c.a.e Oncorhynchus_a ANCESTRAL SPECIES 37 ENSGT00940000157166.d.d #7 ENSGT00940000157050.i.a.d #8 ENSGT00940000164804.a.e #9 ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e #10 ENSGT00940000158959.a.a.a.a ##11 ENSGT00940000162806.b.a.g #12 ENSGT00390000015368.a.a.c.h #13 ENSGT00940000157413.h.b #14 ENSGT00940000158081.o.b.c #15 ENSGT00940000153593.e.b.g.b.b.a #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00390000000051.b.b #19 ENSGT00940000163126.a.a.c #20 ENSGT00940000158995.b.a #21 ENSGT00940000154369.g.a.g #22 ENSGT01030000234629.C.a.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b.c #25 ENSGT00940000159675.b #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a.b #29 ENSGT00950000182903.a.a.d.f #30 ENSGT00940000159223.d.b #31 ENSGT00940000157384.a.c #32 ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y ENSGT00390000011127.d.c ENSGT00940000174564.f ENSGT00940000157030.c.a.e Chinook salmon MODERN SPECIES 1 MAST3 (ENSOTSG00005031247) #7 pik3r2 (ENSOTSG00005031258) #8 ifi30 (ENSOTSG00005032065) #9 mpv17l2 (ENSOTSG00005032066) ENSOTSG00005032068 #10 RAB3A (ENSOTSG00005032072) ##11 jund (ENSOTSG00005032073) #12 pgpep1 (ENSOTSG00005032074) #13 upf1 (ENSOTSG00005032079) #14 HOMER3 (ENSOTSG00005032705) #15 uba52 (ENSOTSG00005032711) ##16 ENSOTSG00005032740 #17 TIMM44 (ENSOTSG00005032758) #19 rab11bb (ENSOTSG00005034280) #20 MARCHF2 (ENSOTSG00005034282) #21 slc25a36a (ENSOTSG00005034288) #22 spsb4a (ENSOTSG00005034296) #23 zgc:136870 (ENSOTSG00005034297) #24 clstn2a (ENSOTSG00005034298) #25 rbp1.1 (ENSOTSG00005034697) #27 rbp2b (ENSOTSG00005034699) #28 copb2 (ENSOTSG00005034708) #29 DVL3 (ENSOTSG00005035208) #30 AP2M1 (ENSOTSG00005035211) #31 pcyt1aa (ENSOTSG00005035227) #32 SERP1 (ENSOTSG00005035228) selenot1a (ENSOTSG00005035229) zgc:153615 (ENSOTSG00005035230) ENSOTSG00005035231 ppm1la (ENSOTSG00005035232) otol1a (ENSOTSG00005035233) Coho salmon MODERN SPECIES 23 crtc1a (ENSOKIG00005032750) ENSOKIG00005032770 pik3r2 (ENSOKIG00005032870) #8 ifi30 (ENSOKIG00005032978) #9 mpv17l2 (ENSOKIG00005033005) ENSOKIG00005033039 #10 jund (ENSOKIG00005033465) #12 pgpep1 (ENSOKIG00005033478) #13 upf1 (ENSOKIG00005033533) #14 HOMER3 (ENSOKIG00005034071) #15 uba52 (ENSOKIG00005034082) #16 ENSOKIG00005034115 #17 TIMM44 (ENSOKIG00005034165) #19 rab11bb (ENSOKIG00005034516) #20 MARCHF2 (ENSOKIG00005034573) #21 slc25a36a (ENSOKIG00005034598) #22 spsb4a (ENSOKIG00005034605) #23 ENSOKIG00005034614 clstn2a (ENSOKIG00005034701) #25 rbp1.1 (ENSOKIG00005035895) #27 ENSOKIG00005035958 DVL3 (ENSOKIG00005036594) #30 AP2M1 (ENSOKIG00005036681) #31 pcyt1aa (ENSOKIG00005036745) #32 SERP1 (ENSOKIG00005036785) ENSOKIG00005036801 selenot1a (ENSOKIG00005036806) zgc:153615 (ENSOKIG00005036820) ENSOKIG00005036839 PPM1L (ENSOKIG00005036858) otol1a (ENSOKIG00005036876) Rainbow trout MODERN SPECIES 29 pik3r2 (ENSOMYG00000001470) #8 ifi30 (ENSOMYG00000001539) #9 mpv17l2 (ENSOMYG00000001579) ENSOMYG00000001762 #10 ENSOMYG00000001849 ##11 jund (ENSOMYG00000001855) #12 pgpep1 (ENSOMYG00000001889) #13 upf1 (ENSOMYG00000002069) #14 ENSOMYG00000002121 #15 uba52 (ENSOMYG00000002136) ##16 ENSOMYG00000002163 #17 ENSOMYG00000076562 ENSOMYG00000002736 #19 rb11a (ENSOMYG00000003016) ENSOMYG00000073077 #21 slc25a36a (ENSOMYG00000003050) #22 spsb4a (ENSOMYG00000003071) #23 clstn2a (ENSOMYG00000003476) #25 rbp1 (ENSOMYG00000068944) #27 copb2 (ENSOMYG00000004282) #29 ENSOMYG00000004665 #30 ap2m1 (ENSOMYG00000004709) #31 pcyt1aa (ENSOMYG00000004765) #32 ENSOMYG00000058103 ENSOMYG00000076782 selenot1a (ENSOMYG00000004828) zgc:153615 (ENSOMYG00000004856) ENSOMYG00000069296 ENSOMYG00000004891 ENSOMYG00000004921 ENSOMYG00000005000 Salmo ANCESTRAL SPECIES 35 ENSGT00940000157166.d.d #7 ENSGT00940000157050.i.a.d #8 ENSGT00940000164804.a.e #9 ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e #10 ENSGT00940000158959.a.a.a.a ##11 ENSGT00940000162806.b.a.g #12 ENSGT00390000015368.a.a.c.h #13 ENSGT00940000157413.h.b #14 ENSGT00940000158081.o.b.c #15 ENSGT00940000153593.e.b.g.b.b.a #16 ENSGT01030000234515.a.b.b.b #17 ENSGT00390000000051.b.b #19 ENSGT00940000163126.a.a.c #20 ENSGT00940000158995.b.a #21 ENSGT00940000154369.g.a.g #22 ENSGT01030000234629.C.a.a #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183086.a.a.b.h.b.c #25 ENSGT00990000213390 ENSGT00940000159675.b #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a.b #29 ENSGT00950000182903.a.a.d.f #30 ENSGT00940000159223.d.b #31 ENSGT00940000157384.a.c #32 ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y ENSGT00390000011127.d.c ENSGT00990000213680 River trout MODERN SPECIES 13 MAST3 (ENSSTUG00000045055) #7 pik3r2 (ENSSTUG00000045156) #8 ifi30 (ENSSTUG00000045291) #9 mpv17l2 (ENSSTUG00000045307) ENSSTUG00000045342 #10 RAB3A (ENSSTUG00000045399) ##11 jund (ENSSTUG00000045408) #12 pgpep1 (ENSSTUG00000045411) #13 upf1 (ENSSTUG00000045435) #14 HOMER3 (ENSSTUG00000045507) #15 uba52 (ENSSTUG00000045528) #16 ENSSTUG00000045550 #17 TIMM44 (ENSSTUG00000045610) #19 rab11bb (ENSSTUG00000046273) #20 MARCHF2 (ENSSTUG00000046310) #21 slc25a36a (ENSSTUG00000046315) #22 spsb4a (ENSSTUG00000046366) #23 ENSSTUG00000046370 zgc:136870 (ENSSTUG00000046379) #24 ENSSTUG00000046381 clstn2a (ENSSTUG00000046411) #25 ENSSTUG00000047323 rbp1.1 (ENSSTUG00000047325) #27 copb2 (ENSSTUG00000047339) #29 DVL3 (ENSSTUG00000025749) #30 AP2M1 (ENSSTUG00000025794) #31 pcyt1aa (ENSSTUG00000025829) #32 SERP1 (ENSSTUG00000025883) ENSSTUG00000025900 selenot1a (ENSSTUG00000025910) zgc:153615 (ENSSTUG00000025922) Atlantic salmon MODERN SPECIES 5 MAST3 (ENSSSAG00000073352) #7 pik3r2 (ENSSSAG00000073374) #8 ifi30 (ENSSSAG00000073631) #9 mpv17l2 (ENSSSAG00000103221) ENSSSAG00000073643 #10 JUND (ENSSSAG00000073669) #12 ENSSSAG00000084399 #11 pgpep1 (ENSSSAG00000073672) #13 upf1 (ENSSSAG00000073685) #14 ENSSSAG00000073735 #15 UBIQ (ENSSSAG00000073744) #16 ENSSSAG00000073752 #17 ENSSSAG00000073759 #19 rab11bb (ENSSSAG00000107231) #20 ENSSSAG00000073798 #21 ENSSSAG00000086180 #22 ENSSSAG00000087588 ENSSSAG00000073809 #23 ENSSSAG00000087769 zgc:136870 (ENSSSAG00000073812) #24 clstn2a (ENSSSAG00000073830) #25 ENSSSAG00000111638 ENSSSAG00000074039 RET1 (ENSSSAG00000074041) #27 RBP2 (ENSSSAG00000074042) #28 copb2 (ENSSSAG00000074067) #29 ENSSSAG00000074540 #30 ENSSSAG00000075127 #31 pcyt1aa (ENSSSAG00000075137) #32 ENSSSAG00000075155 selenot1a (ENSSSAG00000039142) Huchen MODERN SPECIES 636 RAB3A (ENSHHUG00000037938) ##11 jund (ENSHHUG00000037933) #12 pgpep1 (ENSHHUG00000037923) #13 upf1 (ENSHHUG00000037879) #14 HOMER3 (ENSHHUG00000037867) #15 uba52 (ENSHHUG00000037841) #16 ENSHHUG00000037767 #17 TIMM44 (ENSHHUG00000037749) #19 rab11bb (ENSHHUG00000037740) #20 MARCHF2 (ENSHHUG00000037734) #21 slc25a36a (ENSHHUG00000037726) #22 ENSHHUG00000037723 spsb4a (ENSHHUG00000037714) #23 clstn2a (ENSHHUG00000037660) #25 ENSHHUG00000037655 Salmoninae ANCESTRAL SPECIES 76 ENSGT00940000157166.d.c #7 ENSGT00940000157050.i.a.c #8 ENSGT00940000164804.a.f #9 ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f #10 ENSGT00940000158959.a.a.a.b ##11 ENSGT00940000162806.b.a.h #12 ENSGT00390000015368.a.a.c.g #13 ENSGT00940000157413.h.a #14 ENSGT00940000158081.o.b.d #15 ENSGT00940000153593.e.b.h #16 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b.a #19 ENSGT00940000163126.a.a.d #20 ENSGT00940000158995.b.b #21 ENSGT00940000154369.g.a.h #22 ENSGT01030000234629.C.a.b #23 ENSGT00950000183086.a.a.b.h.b.d #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675.a #27 ENSGT00900000141083.c.a.a #29 ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e #30 ENSGT00940000159223.d.a #31 ENSGT00940000157384.a.d #32 ENSGT00940000161729.m.a.b ENSGT00390000011725.d.z ENSGT00940000153655.A.b ENSGT00990000209702 ENSGT00390000011127.d.d ENSGT00390000016906.a Huchen MODERN SPECIES 430 MAST3 (ENSHHUG00000014602) #7 pik3r2 (ENSHHUG00000014480) #8 ifi30 (ENSHHUG00000014453) #9 ENSHHUG00000014434 #10 RAB3A (ENSHHUG00000014367) ##11 jund (ENSHHUG00000014358) #12 pgpep1 (ENSHHUG00000014353) #13 upf1 (ENSHHUG00000014328) #14 HOMER3 (ENSHHUG00000014096) #15 uba52 (ENSHHUG00000013789) #16 ENSHHUG00000013743 #17 CTXN1 (ENSHHUG00000013737) #18 TIMM44 (ENSHHUG00000013704) #19 rab11bb (ENSHHUG00000013675) #20 MARCHF2 (ENSHHUG00000013667) #21 slc25a36a (ENSHHUG00000013659) #22 spsb4a (ENSHHUG00000013651) #23 Salmoninae_a ANCESTRAL SPECIES 6 ENSGT00940000157166.d.c #7 ENSGT00940000157050.i.a.c #8 ENSGT00940000164804.a.f #9 ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f #10 ENSGT00940000158959.a.a.a.b ##11 ENSGT00940000162806.b.a.h #12 ENSGT00390000015368.a.a.c.g #13 ENSGT00940000157413.h.a #14 ENSGT00940000158081.o.b.d #15 ENSGT00940000153593.e.b.g.a #16 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b.a #19 ENSGT00940000163126.a.a.d #20 ENSGT00940000158995.b.b #21 ENSGT00940000154369.g.a.h #22 ENSGT01030000234629.C.a.b #23 ENSGT00950000183086.a.a.b.h.b.d #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675.a.b #27 ENSGT00940000159675.a.a #27 ENSGT00900000141083.c.a.a #29 ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e #30 ENSGT00940000159223.d.a #31 ENSGT00940000157384.a.d #32 ENSGT00940000161729.m.a.b.a.a ENSGT00390000011725.d.z ENSGT00940000153655.A.b ENSGT00990000209702 ENSGT00390000011127.d.d Salmo ANCESTRAL SPECIES 5 ENSGT00940000157166.d.c #7 ENSGT00940000157050.i.a.c #8 ENSGT00940000164804.a.f #9 ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f #10 ENSGT00940000158959.a.a.a.b ##11 ENSGT00940000162806.b.a.h #12 ENSGT00390000015368.a.a.c.g #13 ENSGT00940000157413.h.a #14 ENSGT00940000158081.o.b.d #15 ENSGT00940000153593.e.b.g.b.a #16 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b.a #19 ENSGT00940000163126.a.a.d #20 ENSGT00940000158995.b.b #21 ENSGT00940000154369.g.a.h #22 ENSGT01030000234629.C.a.b #23 ENSGT00950000183086.a.a.b.h.b.d #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675.a.b #27 ENSGT00940000159675.a.a #27 ENSGT00900000141083.c.a.a #29 ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e #30 ENSGT00940000159223.d.a #31 ENSGT00940000157384.a.d #32 ENSGT00940000161729.m.a.b.a.a ENSGT00390000011725.d.z ENSGT00940000153655.A.b ENSGT00990000209702 ENSGT00390000011127.d.d Atlantic salmon MODERN SPECIES 22 ENSSSAG00000076863 MAST3 (ENSSSAG00000076870) #7 pik3r2 (ENSSSAG00000076897) #8 ifi30 (ENSSSAG00000077221) #9 mpv17l2 (ENSSSAG00000077227) ENSSSAG00000077260 #10 ENSSSAG00000085555 ##11 jund (ENSSSAG00000077470) #12 upf1 (ENSSSAG00000077507) #14 ENSSSAG00000077729 #15 uba52 (ENSSSAG00000077735) #16 ENSSSAG00000077747 #18 ENSSSAG00000077766 #19 rab11bb (ENSSSAG00000077887) #20 marh2 (ENSSSAG00000077903) #21 slc25a36a (ENSSSAG00000101330) #22 spsb4a (ENSSSAG00000001822) #23 clstn2a (ENSSSAG00000001846) #25 nmnat3 (ENSSSAG00000095565) #26 rbp1.1 (ENSSSAG00000002082) #27 rbp1.1 (ENSSSAG00000084760) #27 copb2 (ENSSSAG00000002265) #29 ENSSSAG00000119258 ENSSSAG00000003034 #30 ap2m1 (ENSSSAG00000072141) #31 ENSSSAG00000099258 PCY1A (ENSSSAG00000003115) #32 SERP1 (ENSSSAG00000003135) selenot1a (ENSSSAG00000103633) ENSSSAG00000003148 ENSSSAG00000003163 River trout MODERN SPECIES 24 MAST3 (ENSSTUG00000047232) #7 pik3r2 (ENSSTUG00000047153) #8 ifi30 (ENSSTUG00000047130) #9 mpv17l2 (ENSSTUG00000047103) ENSSTUG00000047068 #10 RAB3A (ENSSTUG00000047034) ##11 jund (ENSSTUG00000047026) #12 pgpep1 (ENSSTUG00000047019) #13 upf1 (ENSSTUG00000046629) #14 HOMER3 (ENSSTUG00000046586) #15 uba52 (ENSSTUG00000046572) #16 CTXN1 (ENSSTUG00000046563) #18 TIMM44 (ENSSTUG00000046222) #19 rab11bb (ENSSTUG00000046172) #20 MARCHF2 (ENSSTUG00000046167) #21 slc25a36a (ENSSTUG00000046079) #22 spsb4a (ENSSTUG00000046068) #23 ENSSTUG00000046064 clstn2a (ENSSTUG00000045666) #25 NMNAT3 (ENSSTUG00000045643) #26 rbp1.1 (ENSSTUG00000045630) #27 rbp1.1 (ENSSTUG00000045623) #27 copb2 (ENSSTUG00000045123) #29 ENSSTUG00000045094 dvl3a (ENSSTUG00000044755) #30 ap2m1a (ENSSTUG00000044679) #31 pcyt1aa (ENSSTUG00000044654) #32 SERP1 (ENSSTUG00000044645) selenot1a (ENSSTUG00000044625) ENSSTUG00000044619 ENSSTUG00000044605 Oncorhynchus ANCESTRAL SPECIES 15 ENSGT00940000157166.d.c #7 ENSGT00940000157050.i.a.c #8 ENSGT00940000164804.a.f #9 ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f #10 ENSGT00940000158959.a.a.a.b ##11 ENSGT00940000162806.b.a.h #12 ENSGT00390000015368.a.a.c.g #13 ENSGT00940000157413.h.a #14 ENSGT00940000158081.o.b.d #15 ENSGT00940000153593.e.b.g.a #16 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b.a #19 ENSGT00940000163126.a.a.d #20 ENSGT00940000158995.b.b #21 ENSGT00940000154369.g.a.h #22 ENSGT01030000234629.C.a.b #23 ENSGT00950000183086.a.a.b.h.b.d #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675.a.a #27 ENSGT00900000141083.c.a.a #29 ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e #30 ENSGT00940000159223.d.a #31 ENSGT00940000157384.a.d #32 ENSGT00940000161729.m.a.b.a.a ENSGT00390000011725.d.z ENSGT00940000153655.A.b ENSGT00990000209702 ENSGT00390000011127.d.d ENSGT00390000016906.a Rainbow trout MODERN SPECIES 20 ifi30 (ENSOMYG00000046840) #9 ENSOMYG00000046833 ENSOMYG00000046828 ENSOMYG00000046814 #10 ENSOMYG00000046795 ##11 jund (ENSOMYG00000046794) #12 pgpep1 (ENSOMYG00000046787) #13 upf1 (ENSOMYG00000046745) #14 ENSOMYG00000046715 #15 uba52 (ENSOMYG00000046709) #16 ENSOMYG00000059679 ENSOMYG00000046700 #18 ENSOMYG00000046644 #19 rab11bb (ENSOMYG00000046591) #20 ENSOMYG00000046583 #21 slc25a36a (ENSOMYG00000046572) #22 ENSOMYG00000058056 spsb4a (ENSOMYG00000046561) #23 clstn2a (ENSOMYG00000046517) #25 NMNAT3 (ENSOMYG00000046471) #26 rbp1.1 (ENSOMYG00000003879) #27 rbp1.1 (ENSOMYG00000073442) #27 copb2 (ENSOMYG00000046308) #29 ENSOMYG00000046266 dvl3a (ENSOMYG00000046247) #30 ENSOMYG00000046211 #31 pcyt1aa (ENSOMYG00000046197) #32 SERP1 (ENSOMYG00000048273) selenot1a (ENSOMYG00000046175) ENSOMYG00000046167 ENSOMYG00000046154 Oncorhynchus_a ANCESTRAL SPECIES 22 ENSGT00940000157166.d.c #7 ENSGT00940000157050.i.a.c #8 ENSGT00940000164804.a.f #9 ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f #10 ENSGT00940000158959.a.a.a.b ##11 ENSGT00940000162806.b.a.h #12 ENSGT00390000015368.a.a.c.g #13 ENSGT00940000157413.h.a #14 ENSGT00940000158081.o.b.d #15 ENSGT00940000153593.e.b.g.a #16 ENSGT00940000154412.C.c.a #18 ENSGT00390000000051.b.a #19 ENSGT00940000163126.a.a.d #20 ENSGT00940000158995.b.b #21 ENSGT00940000154369.g.a.h #22 ENSGT01030000234629.C.a.b #23 ENSGT00950000183086.a.a.b.h.b.d #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675.a.a #27 ENSGT00900000141083.c.a.a #29 ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e #30 ENSGT00940000159223.d.a #31 ENSGT00940000157384.a.d #32 ENSGT00940000161729.m.a.b.a.a ENSGT00390000011725.d.z ENSGT00940000153655.A.b ENSGT00990000209702 ENSGT00390000011127.d.d ENSGT00390000016906.a Chinook salmon MODERN SPECIES 2888 ifi30 (ENSOTSG00005027386) #9 mpv17l2 (ENSOTSG00005027385) ENSOTSG00005027382 #10 RAB3A (ENSOTSG00005027381) ##11 jund (ENSOTSG00005027380) #12 pgpep1 (ENSOTSG00005027379) #13 upf1 (ENSOTSG00005027257) #14 HOMER3 (ENSOTSG00005027255) #15 uba52 (ENSOTSG00005027254) #16 ENSOTSG00005027252 CTXN1 (ENSOTSG00005027251) #18 TIMM44 (ENSOTSG00005026371) #19 rab11bb (ENSOTSG00005026342) #20 MARCHF2 (ENSOTSG00005026341) #21 SLC25A36 (ENSOTSG00005026340) ##22 slc25a36a (ENSOTSG00005026339) #22 spsb4a (ENSOTSG00005026338) #23 ENSOTSG00005026337 clstn2a (ENSOTSG00005026336) #25 NMNAT3 (ENSOTSG00005026335) #26 rbp1.1 (ENSOTSG00005026334) #27 copb2 (ENSOTSG00005023103) #29 ENSOTSG00005023098 dvl3a (ENSOTSG00005023093) #30 ap2m1a (ENSOTSG00005023092) #31 pcyt1aa (ENSOTSG00005023090) #32 SERP1 (ENSOTSG00005023089) selenot1a (ENSOTSG00005023087) ENSOTSG00005023086 ENSOTSG00005023083 zgc:153615 (ENSOTSG00005023081) Coho salmon MODERN SPECIES 19 ENSOKIG00005015697 pik3r2 (ENSOKIG00005015619) #8 ifi30 (ENSOKIG00005015563) #9 ENSOKIG00005015543 ENSOKIG00005015505 #10 RAB3A (ENSOKIG00005050655) ##11 jund (ENSOKIG00005050651) #12 pgpep1 (ENSOKIG00005050649) #13 upf1 (ENSOKIG00005050636) #14 HOMER3 (ENSOKIG00005050624) #15 uba52 (ENSOKIG00005050621) #16 ENSOKIG00005050619 CTXN1 (ENSOKIG00005050616) #18 rab11bb (ENSOKIG00005050607) #20 MARCHF2 (ENSOKIG00005050598) #21 slc25a36a (ENSOKIG00005050589) #22 TIMM44 (ENSOKIG00005050575) #19 spsb4a (ENSOKIG00005050568) #23 clstn2a (ENSOKIG00005050560) #25 NMNAT3 (ENSOKIG00005050549) #26 rbp1.1 (ENSOKIG00005050546) #27 copb2 (ENSOKIG00005050504) #29 ENSOKIG00005050484 dvl3a (ENSOKIG00005050468) #30 ap2m1a (ENSOKIG00005050452) #31 pcyt1aa (ENSOKIG00005050446) #32 SERP1 (ENSOKIG00005050444) selenot1a (ENSOKIG00005050438) ENSOKIG00005050433 ENSOKIG00005050428 zgc:153615 (ENSOKIG00005050423) Northern pike MODERN SPECIES 2 pik3r2 (ENSELUG00000001241) #8 ifi30 (ENSELUG00000020539) #9 mpv17l2 (ENSELUG00000020559) ENSELUG00000020697 #10 RAB3A (ENSELUG00000032538) ##11 jund (ENSELUG00000020828) #12 pgpep1 (ENSELUG00000020843) #13 upf1 (ENSELUG00000020917) #14 HOMER3 (ENSELUG00000020980) #15 uba52 (ENSELUG00000027664) #16 CERS4 (ENSELUG00000020996) #17 CTXN1 (ENSELUG00000000927) #18 TIMM44 (ENSELUG00000021107) #19 rab11bb (ENSELUG00000021148) #20 MARCHF2 (ENSELUG00000000931) #21 slc25a36a (ENSELUG00000021181) #22 spsb4a (ENSELUG00000021197) #23 clstn2a (ENSELUG00000021303) #25 NMNAT3 (ENSELUG00000021366) #26 rbp1.1 (ENSELUG00000021393) #27 rbp2b (ENSELUG00000021410) #28 copb2 (ENSELUG00000021442) #29 dvl3a (ENSELUG00000021493) #30 ap2m1a (ENSELUG00000021515) #31 pcyt1aa (ENSELUG00000021543) #32 zgc:92744 (ENSELUG00000021578) selenot1a (ENSELUG00000021595) ENSELUG00000021606 zgc:153615 (ENSELUG00000021618) ENSELUG00000021639 zp3b (ENSELUG00000021647) Otomorpha ANCESTRAL SPECIES 38 ENSGT00940000160050 ENSGT00940000160480.c.b ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00980000200268 ENSGT01060000253400 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT00940000154369.h ##22 ENSGT01030000234629.C.d #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675.c #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 Clupeiformes ANCESTRAL SPECIES 283 ENSGT00950000183136.b.b ENSGT00950000183115.a.a.b ENSGT00940000161398.f.c ENSGT00940000161398.f.d ENSGT00940000156342.c ENSGT00940000162075.a.b ENSGT00900000141083.c.a #29 ENSGT00940000159675.c #27 ENSGT00950000183179.b.b #26 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00940000165265.g.a ENSGT00980000200268 ENSGT00940000173713 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.d #23 Atlantic herring MODERN SPECIES 14 ENSCHAG00000000746 ENSCHAG00000000726 ENSCHAG00000000695 ENSCHAG00000000663 ENSCHAG00000000604 ENSCHAG00000026614 ENSCHAG00000026611 ENSCHAG00000026607 ENSCHAG00000026604 ENSCHAG00000026601 ENSCHAG00000026599 ENSCHAG00000026597 ccl34a.3 (ENSCHAG00000026591) ENSCHAG00000026588 epha4a (ENSCHAG00000026105) slc25a36a (ENSCHAG00000026026) #22 SPSB4 (ENSCHAG00000026022) #23 ENSCHAG00000026021 ENSCHAG00000026016 ENSCHAG00000026010 uggt1 (ENSCHAG00000024188) hs6st1a (ENSCHAG00000024080) otomp (ENSCHAG00000024069) acvr1l (ENSCHAG00000024046) d2hgdh (ENSCHAG00000023960) adipoqb (ENSCHAG00000023950) ENSCHAG00000023749 ENSCHAG00000023316 ENSCHAG00000023296 ENSCHAG00000023278 ENSCHAG00000022721 Denticle herring MODERN SPECIES 14 zgc:110158 (ENSDCDG00000000248) ZNF622 (ENSDCDG00000032748) d2hgdh (ENSDCDG00000032743) acvr1l (ENSDCDG00000032726) otomp (ENSDCDG00000032724) ENSDCDG00000032723 ENSDCDG00000032722 hs6st1a (ENSDCDG00000032718) uggt1 (ENSDCDG00000032456) epha4b (ENSDCDG00000032143) ENSDCDG00000032102 ENSDCDG00000032099 ENSDCDG00000032096 epha4a (ENSDCDG00000031988) ENSDCDG00000031974 slc25a36a (ENSDCDG00000031968) #22 spsb4a (ENSDCDG00000031962) #23 clstn2a (ENSDCDG00000030858) #25 NMNAT3 (ENSDCDG00000030776) #26 rbp1.1 (ENSDCDG00000030771) #27 copb2 (ENSDCDG00000030458) #29 foxl2b (ENSDCDG00000030447) per2 (ENSDCDG00000030438) hes6 (ENSDCDG00000030425) itm2cb (ENSDCDG00000030421) lpar5a (ENSDCDG00000030419) GPR55 (ENSDCDG00000030418) gigyf2 (ENSDCDG00000030413) ENSDCDG00000030408 ENSDCDG00000030406 ENSDCDG00000030405 Otophysi ANCESTRAL SPECIES 3 ENSGT00940000160050 ENSGT00940000160480.c.b ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00990000209937 ENSGT01060000253400 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT00940000154369.h ##22 ENSGT01030000234629.C.d #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675.c #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00940000160062.a ENSGT00980000198654 ENSGT00940000157990.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163496.a.i.a ENSGT00940000159567.a.a ENSGT00940000157841 Characiphysae ANCESTRAL SPECIES 35 ENSGT00940000160480.c.b ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00990000209937 ENSGT00990000208442 ENSGT00940000173713 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT01030000234629.C.d #23 ENSGT00950000183116.b.a.a.a.b ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675.c #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT01030000234576.D.a.a.a ENSGT00940000160062.a ENSGT00940000157990.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163496.a.i.a ENSGT00940000159567.a.a ENSGT00940000157841 Characiphysae_b ANCESTRAL SPECIES 33 ENSGT00940000160480.c.b ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00990000209937 ENSGT00990000208442 ENSGT00940000173713 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT00940000154369.g.b.d ##22 ENSGT01030000234629.C.d #23 ENSGT00950000183116.b.a.a.a.b ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675.c #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT01030000234576.D.a.a.a ENSGT00940000160062.a ENSGT00940000157990.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163496.a.i.a ENSGT00940000159567.a.a Characoidei ANCESTRAL SPECIES 20 ENSGT00940000160480.c.b ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00990000209937 ENSGT00990000208442 ENSGT00940000173713 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT01030000234629.C.d #23 ENSGT00950000183116.b.a.a.a.b ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675.c #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT01030000234576.D.a.a.a ENSGT00940000160062.a ENSGT00940000157990.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163520.A.a.a.a.b.a ENSGT00940000157841 ENSGT00940000162200.a.b Mexicana tetra MODERN SPECIES 7 klhl18 (ENSAMXG00000034172) ENSAMXG00000002692 ENSAMXG00000031440 NRBP2 (ENSAMXG00000000298) puf60a (ENSAMXG00000036570) ENSAMXG00000034383 tmub1 (ENSAMXG00000037356) epha4b (ENSAMXG00000016842) ENSAMXG00000036237 ENSAMXG00000042025 ENSAMXG00000038570 ENSAMXG00000036590 ENSAMXG00000030404 epha4a (ENSAMXG00000006290) ENSAMXG00000041103 slc25a36a (ENSAMXG00000006179) #22 zgc:136870 (ENSAMXG00000031894) #24 spsb4a (ENSAMXG00000033897) #23 clstn2a (ENSAMXG00000006013) #25 NMNAT3 (ENSAMXG00000029880) #26 rbp1.1 (ENSAMXG00000036023) #27 rbp2b (ENSAMXG00000038423) #28 copb2 (ENSAMXG00000005818) #29 ENSAMXG00000031441 rem2 (ENSAMXG00000005708) carmil3 (ENSAMXG00000005612) ENSAMXG00000043196 ENSAMXG00000021206 CDH24 (ENSAMXG00000042071) ENSAMXG00000029585 PSMB11 (ENSAMXG00000042921) Red-bellied piranha MODERN SPECIES 363 ENSPNAG00000020792 ccl34a.3 (ENSPNAG00000020777) ENSPNAG00000020755 epha4a (ENSPNAG00000020745) slc25a36a (ENSPNAG00000020683) #22 spsb4a (ENSPNAG00000020657) #23 zgc:136870 (ENSPNAG00000020650) #24 Channel catfish MODERN SPECIES 26 keap1a (ENSIPUG00000008421) Ssbp3 (ENSIPUG00000008191) znf622 (ENSIPUG00000008147) d2hgdh (ENSIPUG00000008094) acvr1l (ENSIPUG00000008043) otomp (ENSIPUG00000008009) ENSIPUG00000008000 hs6st1a (ENSIPUG00000007988) uggt1 (ENSIPUG00000007756) epha4b (ENSIPUG00000007629) ENSIPUG00000007607 ENSIPUG00000007598 ENSIPUG00000007592 ccl20l (ENSIPUG00000007562) epha4 (ENSIPUG00000007517) slc25a36 (ENSIPUG00000007464) #22 spsb4a (ENSIPUG00000007449) #23 clstn2a (ENSIPUG00000007348) #25 RBP2 (ENSIPUG00000007321) #28 Copb2 (ENSIPUG00000007205) #29 ENSIPUG00000007170 REM2 (ENSIPUG00000007149) carmil3 (ENSIPUG00000007075) ENSIPUG00000007045 si:ch211-51h9.6 (ENSIPUG00000007053) ENSIPUG00000007035 ENSIPUG00000007014 ENSIPUG00000007006 ENSIPUG00000007003 ENSIPUG00000006975 psmb5 (ENSIPUG00000006941) Cyprinoidei ANCESTRAL SPECIES 1 ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00990000209937 ENSGT00990000208442 ENSGT00940000173713 ENSGT01060000253400 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.d #23 ENSGT00940000162556.D.b.a #24 ENSGT00950000183116.b.a.a.a.b ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675.c.a #27 ENSGT00940000159675.c.b #27 ENSGT00940000159675.d #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00950000182774.b.b.b.a.b.a ENSGT00940000160062.a ENSGT00980000198654 ENSGT00940000157990.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b Cyprininae ANCESTRAL SPECIES 72 ENSGT00950000183049.C.a.a.h.a ENSGT00390000018047.u ENSGT00550000075086.b ENSGT00940000166078.a ENSGT00940000166763.a ENSGT00950000183071.a.a.b.c.c.c ENSGT00390000004600.b.a.i ENSGT00940000165265.g.a.c ENSGT00990000209937.a.b ENSGT00990000209937.a.a ENSGT00990000209992.B ENSGT00990000208442.a.a ENSGT00940000173713.g ENSGT01030000235105.a ENSGT00940000156948.i.b.b ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.d.b #23 ENSGT00940000162556.D.b.a.a #24 ENSGT00950000183116.b.a.a.a.b.c.b ENSGT00950000183116.b.a.a.a.b.c.a.b ENSGT00950000183086.a.a.b.h.b.b #25 ENSGT00950000183179.b.b.f.b #26 ENSGT00940000159675.c.a #27 ENSGT00940000159675.d.b #27 ENSGT00940000160165.b.b #28 ENSGT00900000141083.c.a.f #29 ENSGT00950000182774.b.b.b.a.b.a ENSGT00940000160062.a.a ENSGT00980000198654.a ENSGT00940000157990.a.a.b ENSGT00940000163496.a.i.b.a.b.a Goldfish DUPLICATION Goldfish MODERN SPECIES 19 gtpbp4 (ENSCARG00000015309) SLCO5A1 (ENSCARG00000015522) LACTB2 (ENSCARG00000015529) ESYT2 (ENSCARG00000015558) ENSCARG00000015846 epha4a (ENSCARG00000015854) ENSCARG00000015929 slc25a36a (ENSCARG00000015937) #22 spsb4a (ENSCARG00000015966) #23 zgc:136870 (ENSCARG00000015971) #24 ENSCARG00000015975 clstn2a (ENSCARG00000016008) #25 ENSCARG00000016560 #26 ENSCARG00000016567 #26 rbp1.2 (ENSCARG00000016577) #27 rbp2b (ENSCARG00000016595) #28 copb2 (ENSCARG00000016644) #29 ENSCARG00000017160 rem2 (ENSCARG00000017167) ENSCARG00000017177 carmil3 (ENSCARG00000017196) ENSCARG00000017326 ENSCARG00000017333 Goldfish MODERN SPECIES 11 ebi3 (ENSCARG00000002858) odf3l2a (ENSCARG00000002864) crlf1a (ENSCARG00000002875) keap1a (ENSCARG00000002888) epha4b (ENSCARG00000002910) ENSCARG00000003065 ENSCARG00000003075 ENSCARG00000003087 ENSCARG00000003094 ENSCARG00000003103 ENSCARG00000003113 ENSCARG00000003134 ENSCARG00000003155 ENSCARG00000003165 epha4a (ENSCARG00000003291) slc25a36a (ENSCARG00000005538) #22 spsb4a (ENSCARG00000005624) #23 zgc:136870 (ENSCARG00000005626) #24 ENSCARG00000005628 clstn2a (ENSCARG00000005654) #25 ENSCARG00000006086 ENSCARG00000006101 #26 RBP1 (ENSCARG00000006111) #27 rbp1.2 (ENSCARG00000006129) #27 rbp2b (ENSCARG00000006140) #28 copb2 (ENSCARG00000006255) #29 rem2 (ENSCARG00000007349) carmil3 (ENSCARG00000007368) rem2 (ENSCARG00000007420) copb2 (ENSCARG00000007476) #29 rbp2b (ENSCARG00000007586) #28 Cyprininae_a DUPLICATION Cyprininae_a ANCESTRAL SPECIES 149 ENSGT00940000166078.b ENSGT00940000166763.b ENSGT00950000183071.a.a.b.c.c.d ENSGT00390000004600.b.a.j ENSGT00940000165265.g.a.d ENSGT00990000209937.b ENSGT00990000208442.b ENSGT00940000173713.g ENSGT01030000235105.b.b ENSGT00990000209992.A ENSGT00990000208442.a.b ENSGT00940000173713.h.a ENSGT01060000253400 ENSGT01030000235105.a ENSGT00940000156948.i.b.b ENSGT00940000154369.g.a.c #22 ENSGT01030000234629.C.d.b #23 ENSGT00940000162556.D.b.a.a #24 ENSGT00950000183116.b.a.a.a.b.c.b ENSGT00950000183116.b.a.a.a.b.c.a.b ENSGT00950000183086.a.a.b.h.b.b #25 ENSGT00950000183179.b.b.f.b #26 ENSGT00940000159675.c.a.b #27 ENSGT00940000159675.c.b #27 ENSGT00940000159675.d.b #27 ENSGT00940000160165.b.b #28 ENSGT00900000141083.c.a.f #29 ENSGT00950000182774.b.b.b.a.b.a ENSGT00940000160062.a.a ENSGT00980000198654.a ENSGT00940000157990.a.a.b Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 791 ENSSGRG00000050135 ENSSGRG00000050136 ENSSGRG00000050138 ENSSGRG00000050139 ENSSGRG00000050140 ENSSGRG00000050142 epha4a (ENSSGRG00000050143) slc25a36a (ENSSGRG00000050151) #22 slc25a36a (ENSSGRG00000050155) #22 spsb4a (ENSSGRG00000050156) #23 ENSSGRG00000050157 ENSSGRG00000050158 clstn2a (ENSSGRG00000050159) #25 ENSSGRG00000050160 Golden-line barbel MODERN SPECIES 791 ENSSGRG00000050135 ENSSGRG00000050136 ENSSGRG00000050138 ENSSGRG00000050139 ENSSGRG00000050140 ENSSGRG00000050142 epha4a (ENSSGRG00000050143) slc25a36a (ENSSGRG00000050151) #22 slc25a36a (ENSSGRG00000050155) #22 spsb4a (ENSSGRG00000050156) #23 ENSSGRG00000050157 ENSSGRG00000050158 clstn2a (ENSSGRG00000050159) #25 ENSSGRG00000050160 Common carp reference MODERN SPECIES 21 otomp (ENSCCRG00000079751) acvr1l (ENSCCRG00000062115) hs6st1a (ENSCCRG00000074522) uggt1 (ENSCCRG00000002547) epha4b (ENSCCRG00000077447) ENSCCRG00000067743 ENSCCRG00000045104 ENSCCRG00000024391 ENSCCRG00000024388 ENSCCRG00000024385 ENSCCRG00000026063 ENSCCRG00000026069 si:ch211-122l24.6 (ENSCCRG00000082253) ENSCCRG00000026157 epha4a (ENSCCRG00000078510) slc25a36a (ENSCCRG00000053985) #22 spsb4a (ENSCCRG00000019229) #23 zgc:136870 (ENSCCRG00000019176) #24 ENSCCRG00000056006 ENSCCRG00000019168 clstn2a (ENSCCRG00000066034) #25 NMNAT3 (ENSCCRG00000012872) #26 RBP1 (ENSCCRG00000055369) #27 rbp1.1 (ENSCCRG00000012885) #27 rbp1.2 (ENSCCRG00000012862) #27 copb2 (ENSCCRG00000080500) #29 si:ch211-119o8.6 (ENSCCRG00000052949) rem2 (ENSCCRG00000000217) ENSCCRG00000000209 carmil3 (ENSCCRG00000000152) ENSCCRG00000072148 Cyprininae_a ANCESTRAL SPECIES 84 ENSGT00950000183049.C.a.a.h.a ENSGT00390000018047.u ENSGT00550000075086.b ENSGT00940000166078.a ENSGT00940000166763.a ENSGT00950000183071.a.a.b.c.c.c ENSGT00390000004600.b.a.i ENSGT00940000165265.g.a.c ENSGT00990000209937.a.b ENSGT00990000209937.a.a ENSGT00990000209992.B ENSGT00990000208442.a.a ENSGT00940000173713.h.b.a ENSGT01030000235105.b.a ENSGT00940000156948.i.b.a ENSGT00940000154369.g.a.d #22 ENSGT01030000234629.C.d.a #23 ENSGT00940000162556.D.b.a.b #24 ENSGT00950000183116.b.a.a.a.b.d ENSGT00950000183116.b.a.a.a.b.c.a.a ENSGT00950000183086.a.a.b.h.b.a #25 ENSGT00950000183179.b.b.f.a #26 ENSGT00940000159675.c.a.a #27 ENSGT00940000159675.d.a #27 ENSGT00940000160165.b.a #28 ENSGT00900000141083.c.a.e #29 ENSGT00940000160062.a.b ENSGT00940000159286.a.a ENSGT00940000157990.a.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163496.a.i.b.a.a.a Common carp reference MODERN SPECIES 29 ENSCCRG00000011191 d2hgdh (ENSCCRG00000011782) acvr1l (ENSCCRG00000011267) otomp (ENSCCRG00000011789) hs6st1a (ENSCCRG00000082051) uggt1 (ENSCCRG00000037592) epha4b (ENSCCRG00000076007) ENSCCRG00000054238 ENSCCRG00000080585 ENSCCRG00000065317 ENSCCRG00000066870 ENSCCRG00000082671 ENSCCRG00000077253 ENSCCRG00000035312 epha4a (ENSCCRG00000081582) slc25a36a (ENSCCRG00000060891) #22 spsb4a (ENSCCRG00000044649) #23 zgc:136870 (ENSCCRG00000059635) #24 ENSCCRG00000077349 ENSCCRG00000074438 ENSCCRG00000010953 ENSCCRG00000010951 clstn2a (ENSCCRG00000032694) #25 ENSCCRG00000044641 ENSCCRG00000044638 NMNAT3 (ENSCCRG00000012853) #26 RBP1 (ENSCCRG00000012851) #27 rbp1.2 (ENSCCRG00000012849) #27 rbp2b (ENSCCRG00000006096) #28 copb2 (ENSCCRG00000006200) #29 rem2 (ENSCCRG00000006109) Zebrafish MODERN SPECIES 11 crlf1a (ENSDARG00000024365) keap1a (ENSDARG00000016132) SSBP4 (ENSDARG00000056490) ZNF622 (ENSDARG00000014692) d2hgdh (ENSDARG00000060210) acvr1l (ENSDARG00000014986) otomp (ENSDARG00000040306) hs6st1a (ENSDARG00000054754) uggt1 (ENSDARG00000054746) epha4b (ENSDARG00000011600) ccl34a.4 (ENSDARG00000090873) ccl34a.3 (ENSDARG00000094983) si:ch211-122l24.6 (ENSDARG00000112759) ENSDARG00000112125 epha4a (ENSDARG00000054454) slc25a36a (ENSDARG00000038731) #22 zgc:136870 (ENSDARG00000054837) #24 spsb4a (ENSDARG00000016084) #23 ENSDARG00000095040 clstn2a (ENSDARG00000060637) #25 NMNAT3 (ENSDARG00000077034) #26 rbp1.1 (ENSDARG00000018077) #27 rbp1.2 (ENSDARG00000038742) #27 rbp2b (ENSDARG00000093774) #28 copb2 (ENSDARG00000038743) #29 si:ch211-119o8.6 (ENSDARG00000026972) rem2 (ENSDARG00000074064) ENSDARG00000075562 carmil3 (ENSDARG00000086990) ENSDARG00000111637 CDH24 (ENSDARG00000077996) Osteoglossiformes ANCESTRAL SPECIES 61 ENSGT00390000008688.k.b ENSGT00940000160337.e ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979.e ENSGT00970000193372.b.a.b ENSGT00390000010895.d ENSGT00390000013776 ENSGT00940000155954.a.l ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504 ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.f #23 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.e #23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00940000160165.a ##28 ENSGT00900000141083.c.a #29 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.f ENSGT00940000164578.a.a ENSGT00390000004360.a.b.b ENSGT00950000183115.a ENSGT01040000240444.A.b.b ENSGT01040000240444.A.b.a.a ENSGT01030000234571.b.b.a.a.a P. kingsleyae MODERN SPECIES 111 gosr1 (ENSPKIG00000010461) TRARG1 (ENSPKIG00000010449) prss16 (ENSPKIG00000010431) serpine2 (ENSPKIG00000010406) wdfy1 (ENSPKIG00000010305) dhrs12la (ENSPKIG00000010266) AP1S3 (ENSPKIG00000010242) SCG2 (ENSPKIG00000010228) kcne4 (ENSPKIG00000010211) ACSL3 (ENSPKIG00000010165) SGPP2 (ENSPKIG00000010148) ENSPKIG00000010136 pax3b (ENSPKIG00000010111) EPHA4 (ENSPKIG00000010074) pxylp1 (ENSPKIG00000010037) slc25a36a (ENSPKIG00000009989) #22 SPSB4 (ENSPKIG00000009953) #23 ENSPKIG00000009866 ##25 rbp2a (ENSPKIG00000009801) ##28 copb2 (ENSPKIG00000009722) #29 PIK3CB (ENSPKIG00000009555) PER2 (ENSPKIG00000009456) hes6 (ENSPKIG00000009399) her8.2 (ENSPKIG00000009382) CAB39 (ENSPKIG00000009349) itm2cb (ENSPKIG00000009323) gpr55a (ENSPKIG00000009312) GPR55 (ENSPKIG00000009300) NGEF (ENSPKIG00000009273) kcnj13 (ENSPKIG00000009260) GIGYF2 (ENSPKIG00000009220) Asian bonytongue MODERN SPECIES 1 CPD (ENSSFOG00015014346) gosr1 (ENSSFOG00015014396) TRARG1 (ENSSFOG00015014426) prss16 (ENSSFOG00015014443) serpine2 (ENSSFOG00015014492) wdfy1 (ENSSFOG00015014504) dhrs12la (ENSSFOG00015014554) scg2b (ENSSFOG00015014650) kcne4 (ENSSFOG00015026676) acsl3b (ENSSFOG00015014664) SGPP2 (ENSSFOG00015033117) ENSSFOG00015029785 pax3b (ENSSFOG00015014722) epha4a (ENSSFOG00015014754) pxylp1 (ENSSFOG00015030762) slc25a36a (ENSSFOG00015014829) #22 spsb4b (ENSSFOG00015032747) #23 CLSTN2 (ENSSFOG00015014863) ##25 RBP2 (ENSSFOG00015014921) ##28 copb2 (ENSSFOG00015014936) #29 PIK3CB (ENSSFOG00015015008) PER2 (ENSSFOG00015015057) hes6 (ENSSFOG00015015081) her8.2 (ENSSFOG00015015100) CAB39 (ENSSFOG00015027019) itm2cb (ENSSFOG00015015139) gpr55a (ENSSFOG00015015155) GPR55 (ENSSFOG00015015163) NGEF (ENSSFOG00015015175) gigyf2 (ENSSFOG00015015193) kcnj13 (ENSSFOG00015015213) Osteoglossocephalai ANCESTRAL SPECIES 123 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.b ENSGT00970000193372.b.a.a ENSGT00390000010895 ENSGT00970000193372.b.a.b ENSGT00390000013776 ENSGT00940000155954.a ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504 ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C #23 ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675 #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00940000160165.a ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d Clupeocephala ANCESTRAL SPECIES 144 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00970000193372.b.b ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C #23 ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00940000160165.a ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b ENSGT01040000240444.A.b.b ENSGT01030000234571.b.b.a.a.a Euteleosteomorpha ANCESTRAL SPECIES 126 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00940000160165.a ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b ENSGT01040000240444.A.b.b Acanthomorphata ANCESTRAL SPECIES 98 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b ENSGT00940000160165.a ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a Euacanthomorphacea ANCESTRAL SPECIES 8 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b ENSGT00940000160165.a ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00940000160281 ENSGT00940000161057 Percomorphaceae ANCESTRAL SPECIES 8 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b ENSGT00940000160165.a ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00940000160281 ENSGT00940000161057 Tiger tail seahorse MODERN SPECIES 517 wdfy1 (ENSHCOG00000016262) dhrs12la (ENSHCOG00000016289) AP1S3 (ENSHCOG00000016296) ENSHCOG00000016302 kcne4 (ENSHCOG00000016311) ENSHCOG00000016330 acsl3a (ENSHCOG00000016430) farsb (ENSHCOG00000016462) ENSHCOG00000016479 ENSHCOG00000016512 SGPP2 (ENSHCOG00000016537) ENSHCOG00000016554 pax3b (ENSHCOG00000016573) epha4a (ENSHCOG00000016610) pxylp1 (ENSHCOG00000016625) SLC25A36 (ENSHCOG00000016644) ##22 spsb4a (ENSHCOG00000016659) ##23 CLSTN2 (ENSHCOG00000016690) ##25 rbp2a (ENSHCOG00000016710) ##28 mrps22 (ENSHCOG00000016713) foxl2b (ENSHCOG00000016718) PIK3CB (ENSHCOG00000016759) PER2 (ENSHCOG00000016767) her13 (ENSHCOG00000016789) her8.2 (ENSHCOG00000016804) ENSHCOG00000016829 ITM2C (ENSHCOG00000016875) meis3 (ENSHCOG00000016923) ENSHCOG00000016940 sirt2 (ENSHCOG00000016976) dmac2 (ENSHCOG00000017106) Percomorphaceae_B ANCESTRAL SPECIES 13 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Eupercaria ANCESTRAL SPECIES 7 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Tetraodontidae ANCESTRAL SPECIES 10 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00940000160165.a.a.a ##28 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00940000160281 ENSGT00940000161057 ENSGT00940000154866.A Tetraodon MODERN SPECIES 8 psmd2 (ENSTNIG00000014301) prss16 (ENSTNIG00000014302) serpine2 (ENSTNIG00000014303) wdfy1 (ENSTNIG00000014304) dhrs12la (ENSTNIG00000014305) AP1S3 (ENSTNIG00000014306) ENSTNIG00000014307 kcne4 (ENSTNIG00000014308) acsl3a (ENSTNIG00000014309) farsb (ENSTNIG00000014310) eef1b2 (ENSTNIG00000014311) SGPP2 (ENSTNIG00000014312) pax3b (ENSTNIG00000014313) epha4a (ENSTNIG00000014314) pxylp1 (ENSTNIG00000014315) ENSTNIG00000014316 ##22 spsb4a (ENSTNIG00000014317) ##23 ENSTNIG00000014318 ##25 lpar5b (ENSTNIG00000014319) RBP2 (ENSTNIG00000014320) ##28 foxl2b (ENSTNIG00000014321) PIK3CB (ENSTNIG00000014322) PER2 (ENSTNIG00000014323) her13 (ENSTNIG00000014324) her8.2 (ENSTNIG00000000385) ENSTNIG00000014325 ITM2C (ENSTNIG00000014326) ENSTNIG00000014327 ENSTNIG00000014328 GJD2 (ENSTNIG00000014329) ENSTNIG00000001535 Fugu MODERN SPECIES 2 prss16 (ENSTRUG00000010946) serpine2 (ENSTRUG00000010637) wdfy1 (ENSTRUG00000010333) dhrs12la (ENSTRUG00000010229) ENSTRUG00000031332 ENSTRUG00000025682 kcne4 (ENSTRUG00000010143) acsl3a (ENSTRUG00000009826) farsb (ENSTRUG00000009483) ENSTRUG00000021552 SGPP2 (ENSTRUG00000009369) ENSTRUG00000021876 pax3b (ENSTRUG00000009198) epha4a (ENSTRUG00000008442) pxylp1 (ENSTRUG00000020231) ENSTRUG00000008215 ##22 spsb4a (ENSTRUG00000026889) ##23 CLSTN2 (ENSTRUG00000030827) ##25 ENSTRUG00000032783 lpar5b (ENSTRUG00000023839) rbp2a (ENSTRUG00000008045) ##28 mrps22 (ENSTRUG00000007940) PIK3CB (ENSTRUG00000007179) PER2 (ENSTRUG00000006817) her13 (ENSTRUG00000006688) her8.2 (ENSTRUG00000006663) ENSTRUG00000006438 ITM2C (ENSTRUG00000006075) ENSTRUG00000005924 ENSTRUG00000032831 meis3 (ENSTRUG00000000345) Eupecaria_A ANCESTRAL SPECIES 9 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Ballan wrasse MODERN SPECIES 93 ENSLBEG00000017884 kcne4 (ENSLBEG00000017894) acsl3a (ENSLBEG00000017932) ENSLBEG00000018008 ENSLBEG00000018031 sirt2 (ENSLBEG00000018065) farsb (ENSLBEG00000018127) ENSLBEG00000018194 SGPP2 (ENSLBEG00000018207) ENSLBEG00000018228 pax3b (ENSLBEG00000018254) epha4a (ENSLBEG00000018304) ENSLBEG00000018373 ENSLBEG00000018386 pxylp1 (ENSLBEG00000018402) SLC25A36 (ENSLBEG00000018438) ##22 spsb4a (ENSLBEG00000018485) ##23 CLSTN2 (ENSLBEG00000018525) ##25 lpar5b (ENSLBEG00000018605) rbp2a (ENSLBEG00000018618) ##28 COPB2 (ENSLBEG00000018650) ##29 mrps22 (ENSLBEG00000018725) Eupecaria_B ANCESTRAL SPECIES 9 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Perciformes ANCESTRAL SPECIES 10 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Cottioidei ANCESTRAL SPECIES 4 ENSGT00940000177736 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00940000160281 ENSGT00940000161057 ENSGT00940000154866.A Lumpfish MODERN SPECIES 4 ENSCLMG00005013019 ENSCLMG00005013017 psmd2 (ENSCLMG00005010698) prss16 (ENSCLMG00005010668) serpine2 (ENSCLMG00005010667) dhrs12la (ENSCLMG00005010665) wdfy1 (ENSCLMG00005010662) ENSCLMG00005010642 kcne4 (ENSCLMG00005010641) acsl3a (ENSCLMG00005010121) farsb (ENSCLMG00005010117) SGPP2 (ENSCLMG00005010114) ENSCLMG00005010110 pax3b (ENSCLMG00005010108) pxylp1 (ENSCLMG00005010107) SLC25A36 (ENSCLMG00005010096) ##22 spsb4a (ENSCLMG00005010095) ##23 lpar5b (ENSCLMG00005010094) ENSCLMG00005010093 CLSTN2 (ENSCLMG00005010091) ##25 rbp2a (ENSCLMG00005010090) ##28 COPB2 (ENSCLMG00005010088) ##29 mrps22 (ENSCLMG00005010084) PIK3CB (ENSCLMG00005008841) ENSCLMG00005008838 her13 (ENSCLMG00005008837) her8.2 (ENSCLMG00005008835) ENSCLMG00005008834 ITM2C (ENSCLMG00005008833) ENSCLMG00005008832 meis3 (ENSCLMG00005008829) Stickleback MODERN SPECIES dhrs13b.2 (ENSGACG00000005366) smtnl (ENSGACG00000005375) SEBOX (ENSGACG00000005381) tmem199 (ENSGACG00000005384) poldip2 (ENSGACG00000005396) LRRC75A (ENSGACG00000005426) crk (ENSGACG00000005430) ywhae1 (ENSGACG00000005434) myo1cb (ENSGACG00000005438) SLC43A2 (ENSGACG00000005457) pitpnaa (ENSGACG00000005469) inpp5ka (ENSGACG00000005511) ECEL1 (ENSGACG00000005523) zgc:153039 (ENSGACG00000005540) ENSGACG00000005551 SLC25A36 (ENSGACG00000005559) ##22 CLSTN2 (ENSGACG00000005585) ##25 lpar5b (ENSGACG00000005595) rbp2a (ENSGACG00000005598) ##28 COPB2 (ENSGACG00000005621) ##29 mrps22 (ENSGACG00000005634) foxl2b (ENSGACG00000005639) PIK3CB (ENSGACG00000005645) ENSGACG00000005662 HES6 (ENSGACG00000005680) ENSGACG00000005684 ENSGACG00000005715 ENSGACG00000005721 ENSGACG00000005725 meis3 (ENSGACG00000005732) ENSGACG00000005744 Perciformes_a ANCESTRAL SPECIES 9 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Pike perch MODERN SPECIES 60 psmd2 (ENSSLUG00000024595) prss16 (ENSSLUG00000024507) serpine2 (ENSSLUG00000024504) dhrs12la (ENSSLUG00000024461) wdfy1 (ENSSLUG00000024451) ENSSLUG00000024445 kcne4 (ENSSLUG00000024444) acsl3a (ENSSLUG00000023868) ENSSLUG00000023744 farsb (ENSSLUG00000023706) SGPP2 (ENSSLUG00000023690) ENSSLUG00000023684 pax3b (ENSSLUG00000023671) epha4a (ENSSLUG00000023403) pxylp1 (ENSSLUG00000023371) SLC25A36 (ENSSLUG00000023361) ##22 spsb4a (ENSSLUG00000023357) ##23 CLSTN2 (ENSSLUG00000023266) ##25 lpar5b (ENSSLUG00000023242) rbp2a (ENSSLUG00000023238) ##28 COPB2 (ENSSLUG00000023150) ##29 mrps22 (ENSSLUG00000023133) PIK3CB (ENSSLUG00000022808) PER2 (ENSSLUG00000022765) her13 (ENSSLUG00000022759) her8.2 (ENSSLUG00000022756) ENSSLUG00000022753 ENSSLUG00000022750 ITM2C (ENSSLUG00000022743) lpar5b (ENSSLUG00000022740) ENSSLUG00000022736 Channel bull blenny MODERN SPECIES 4 ENSCGOG00000006008 ENSCGOG00000006009 wdfy1 (ENSCGOG00000006020) dhrs12la (ENSCGOG00000006280) ENSCGOG00000006349 kcne4 (ENSCGOG00000006352) acsl3a (ENSCGOG00000006366) farsb (ENSCGOG00000006513) ENSCGOG00000007342 SGPP2 (ENSCGOG00000007343) ENSCGOG00000007347 pax3b (ENSCGOG00000007355) ENSCGOG00000007483 epha4a (ENSCGOG00000007497) pxylp1 (ENSCGOG00000008533) SLC25A36 (ENSCGOG00000008534) ##22 spsb4a (ENSCGOG00000008585) ##23 CLSTN2 (ENSCGOG00000008630) ##25 ENSCGOG00000009663 mrps22 (ENSCGOG00000009668) PIK3CB (ENSCGOG00000009836) her13 (ENSCGOG00000011185) her8.2 (ENSCGOG00000011188) ENSCGOG00000011193 ITM2C (ENSCGOG00000011325) ENSCGOG00000011328 ENSCGOG00000011330 meis3 (ENSCGOG00000011355) ENSCGOG00000011934 sirt2 (ENSCGOG00000011964) dmac2 (ENSCGOG00000012677) Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Eupercaria_incertae_sedis ANCESTRAL SPECIES 5 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00940000160281 ENSGT00940000161057 ENSGT00940000154866.A European seabass MODERN SPECIES 3 ENSDLAG00005015478 ENSDLAG00005013752 prss16 (ENSDLAG00005015483) serpine2 (ENSDLAG00005015524) wdfy1 (ENSDLAG00005015649) dhrs12la (ENSDLAG00005015755) ENSDLAG00005015875 acsl3a (ENSDLAG00005015895) farsb (ENSDLAG00005016391) ENSDLAG00005016506 SGPP2 (ENSDLAG00005016513) ENSDLAG00005032104 pax3b (ENSDLAG00005016542) EPHA4 (ENSDLAG00005017247) pxylp1 (ENSDLAG00005019541) ENSDLAG00005019555 ##22 ENSDLAG00005034208 ENSDLAG00005028083 ENSDLAG00005019584 ##23 ENSDLAG00005019627 ##25 ENSDLAG00005029656 ENSDLAG00005029788 RBP2 (ENSDLAG00005026550) ##28 COPB2 (ENSDLAG00005020529) ##29 mrps22 (ENSDLAG00005020753) foxl2 (ENSDLAG00005034171) PIK3CB (ENSDLAG00005020770) ENSDLAG00005020824 ENSDLAG00005020871 ENSDLAG00005020875 ENSDLAG00005020882 Large yellow croaker MODERN SPECIES 479 pnkp (ENSLCRG00005017710) ENSLCRG00005017698 ENSLCRG00005017694 dhrs12la (ENSLCRG00005017536) wdfy1 (ENSLCRG00005017521) ENSLCRG00005017520 kcne4 (ENSLCRG00005017519) acsl3a (ENSLCRG00005016039) ENSLCRG00005016024 farsb (ENSLCRG00005015824) SGPP2 (ENSLCRG00005015823) ENSLCRG00005015822 pax3b (ENSLCRG00005015806) epha4a (ENSLCRG00005014647) pxylp1 (ENSLCRG00005014645) SLC25A36 (ENSLCRG00005014644) ##22 spsb4a (ENSLCRG00005014643) ##23 CLSTN2 (ENSLCRG00005014635) ##25 lpar5b (ENSLCRG00005014634) rbp2a (ENSLCRG00005014633) ##28 COPB2 (ENSLCRG00005014204) ##29 mrps22 (ENSLCRG00005014181) PIK3CB (ENSLCRG00005011368) PER2 (ENSLCRG00005011302) HES6 (ENSLCRG00005011299) her8.2 (ENSLCRG00005011297) ENSLCRG00005011293 ITM2C (ENSLCRG00005011291) lpar5b (ENSLCRG00005011289) ENSLCRG00005011287 ENSLCRG00005011285 Gilthead seabream MODERN SPECIES 11 psmd2 (ENSSAUG00010020121) prss16 (ENSSAUG00010020022) serpine2 (ENSSAUG00010020016) dhrs12la (ENSSAUG00010019998) wdfy1 (ENSSAUG00010019952) ENSSAUG00010019944 kcne4 (ENSSAUG00010019943) acsl3a (ENSSAUG00010019839) ENSSAUG00010019835 farsb (ENSSAUG00010019829) SGPP2 (ENSSAUG00010019825) ENSSAUG00010019823 pax3b (ENSSAUG00010019792) epha4a (ENSSAUG00010016809) pxylp1 (ENSSAUG00010016785) SLC25A36 (ENSSAUG00010016782) ##22 spsb4a (ENSSAUG00010016778) ##23 CLSTN2 (ENSSAUG00010014662) ##25 lpar5b (ENSSAUG00010014631) rbp2a (ENSSAUG00010014627) ##28 COPB2 (ENSSAUG00010012728) ##29 mrps22 (ENSSAUG00010012665) PIK3CB (ENSSAUG00010011008) PER2 (ENSSAUG00010010319) HES6 (ENSSAUG00010010304) her8.2 (ENSSAUG00010010303) ENSSAUG00010010300 ITM2C (ENSSAUG00010010296) lpar5b (ENSSAUG00010010292) lpar5b (ENSSAUG00010010291) lpar5b (ENSSAUG00010010288) Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Anabantaria ANCESTRAL SPECIES 9 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Zig-zag eel MODERN SPECIES 4 ENSMAMG00000011642 prss16 (ENSMAMG00000011675) serpine2 (ENSMAMG00000011683) wdfy1 (ENSMAMG00000011685) dhrs12la (ENSMAMG00000011712) ENSMAMG00000026117 kcne4 (ENSMAMG00000011787) acsl3a (ENSMAMG00000011800) farsb (ENSMAMG00000011835) ENSMAMG00000011897 SGPP2 (ENSMAMG00000011912) ENSMAMG00000011970 pax3b (ENSMAMG00000011978) EPHA4 (ENSMAMG00000012022) pxylp1 (ENSMAMG00000012120) ENSMAMG00000026348 ##22 ENSMAMG00000012146 ##23 ENSMAMG00000012176 ##25 ENSMAMG00000024587 RBP2 (ENSMAMG00000012240) ##28 MRPS22 (ENSMAMG00000012264) ENSMAMG00000012296 ENSMAMG00000012347 ENSMAMG00000012374 ENSMAMG00000027547 ENSMAMG00000012469 ENSMAMG00000012502 ENSMAMG00000028330 meis3 (ENSMAMG00000012541) ENSMAMG00000026554 sirt2 (ENSMAMG00000012576) Anabantoidei ANCESTRAL SPECIES 14 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Siamese fighting fish MODERN SPECIES 4 prss16 (ENSBSLG00000020948) serpine2 (ENSBSLG00000020585) wdfy1 (ENSBSLG00000020575) dhrs12la (ENSBSLG00000020564) ENSBSLG00000020560 kcne4 (ENSBSLG00000020558) acsl3a (ENSBSLG00000019665) ENSBSLG00000019622 farsb (ENSBSLG00000019456) SGPP2 (ENSBSLG00000019393) ENSBSLG00000019391 pax3b (ENSBSLG00000019381) epha4a (ENSBSLG00000018927) pxylp1 (ENSBSLG00000018811) ENSBSLG00000018797 SLC25A36 (ENSBSLG00000018769) ##22 spsb4a (ENSBSLG00000018738) ##23 CLSTN2 (ENSBSLG00000016943) ##25 rbp2a (ENSBSLG00000015872) ##28 COPB2 (ENSBSLG00000015276) ##29 mrps22 (ENSBSLG00000015161) PIK3CB (ENSBSLG00000013020) ENSBSLG00000012891 her13 (ENSBSLG00000012880) ENSBSLG00000012856 ITM2C (ENSBSLG00000012845) ENSBSLG00000012841 ENSBSLG00000012832 meis3 (ENSBSLG00000012619) ENSBSLG00000012579 sirt2 (ENSBSLG00000012322) Climbing perch MODERN SPECIES 4 ENSATEG00000020752 ENSATEG00000020821 ENSATEG00000020911 prss16 (ENSATEG00000020982) serpine2 (ENSATEG00000020995) wdfy1 (ENSATEG00000021008) dhrs12la (ENSATEG00000021047) ENSATEG00000021367 kcne4 (ENSATEG00000021395) acsl3a (ENSATEG00000021403) farsb (ENSATEG00000021441) SGPP2 (ENSATEG00000021475) pax3b (ENSATEG00000021488) EPHA4 (ENSATEG00000021519) pxylp1 (ENSATEG00000021551) ENSATEG00000021568 ##22 ENSATEG00000021585 ##23 ENSATEG00000021594 ##25 ENSATEG00000021614 ENSATEG00000026860 RBP2 (ENSATEG00000021618) ##28 COPB2 (ENSATEG00000021631) ##29 MRPS22 (ENSATEG00000021646) PIK3CB (ENSATEG00000021657) ENSATEG00000021691 ENSATEG00000021709 ENSATEG00000025611 ENSATEG00000021754 ITM2C (ENSATEG00000021766) ENSATEG00000021777 ENSATEG00000021783 Carangaria ANCESTRAL SPECIES 8 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Carangaria_A ANCESTRAL SPECIES 37 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Seriola ANCESTRAL SPECIES 51 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Yellowtail amberjack MODERN SPECIES 3091 pxylp1 (ENSSLDG00000025042) SLC25A36 (ENSSLDG00000025033) ##22 spsb4a (ENSSLDG00000025027) ##23 CLSTN2 (ENSSLDG00000025020) ##25 lpar5b (ENSSLDG00000025014) rbp2a (ENSSLDG00000025008) ##28 COPB2 (ENSSLDG00000024979) ##29 mrps22 (ENSSLDG00000024969) PIK3CB (ENSSLDG00000024911) ENSSLDG00000024851 HES6 (ENSSLDG00000024834) her8.2 (ENSSLDG00000024823) ENSSLDG00000024805 ITM2C (ENSSLDG00000024796) lpar5b (ENSSLDG00000024790) ENSSLDG00000024786 Greater amberjack MODERN SPECIES 114 serpine2 (ENSSDUG00000009476) wdfy1 (ENSSDUG00000009505) dhrs12la (ENSSDUG00000009540) AP1S3 (ENSSDUG00000009569) ENSSDUG00000009583 kcne4 (ENSSDUG00000009590) acsl3a (ENSSDUG00000009608) farsb (ENSSDUG00000009685) ENSSDUG00000009771 SGPP2 (ENSSDUG00000009776) ENSSDUG00000009793 pax3b (ENSSDUG00000009804) epha4a (ENSSDUG00000009839) ENSSDUG00000009883 pxylp1 (ENSSDUG00000009897) SLC25A36 (ENSSDUG00000009920) ##22 spsb4a (ENSSDUG00000009950) ##23 CLSTN2 (ENSSDUG00000009967) ##25 lpar5b (ENSSDUG00000010000) rbp2a (ENSSDUG00000010022) ##28 COPB2 (ENSSDUG00000010056) ##29 mrps22 (ENSSDUG00000010135) foxl2b (ENSSDUG00000010149) PIK3CB (ENSSDUG00000010182) PER2 (ENSSDUG00000010286) HES6 (ENSSDUG00000010317) her8.2 (ENSSDUG00000010328) ENSSDUG00000010338 ITM2C (ENSSDUG00000010370) lpar5b (ENSSDUG00000010411) ENSSDUG00000010420 Barramundi perch MODERN SPECIES 124 psmd2 (ENSLCAG00010002522) prss16 (ENSLCAG00010002731) serpine2 (ENSLCAG00010002733) wdfy1 (ENSLCAG00010002740) dhrs12la (ENSLCAG00010002752) ENSLCAG00010002758 kcne4 (ENSLCAG00010002760) acsl3a (ENSLCAG00010002837) farsb (ENSLCAG00010003414) ENSLCAG00010003460 SGPP2 (ENSLCAG00010003464) ENSLCAG00010003467 pax3b (ENSLCAG00010003474) epha4a (ENSLCAG00010003599) pxylp1 (ENSLCAG00010004187) SLC25A36 (ENSLCAG00010004194) ##22 spsb4a (ENSLCAG00010004206) ##23 CLSTN2 (ENSLCAG00010004213) ##25 lpar5b (ENSLCAG00010004216) rbp2a (ENSLCAG00010004218) ##28 COPB2 (ENSLCAG00010004245) ##29 mrps22 (ENSLCAG00010004320) PIK3CB (ENSLCAG00010004460) ENSLCAG00010004908 HES6 (ENSLCAG00010005146) her8.2 (ENSLCAG00010005153) myo7aa (ENSLCAG00010005254) ENSLCAG00010005772 Pleuronectoidei ANCESTRAL SPECIES 13 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.d ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00940000160281 ENSGT00940000161057 ENSGT00940000154866.A Tongue sole MODERN SPECIES 14 bcl9l (ENSCSEG00000006896) ENSCSEG00000006875 TREH (ENSCSEG00000006851) ENSCSEG00000006846 FBXO40 (ENSCSEG00000006833) ttc36 (ENSCSEG00000006840) NECTIN1 (ENSCSEG00000006820) ENSCSEG00000006815 trpc6a (ENSCSEG00000006802) pgr (ENSCSEG00000006795) ENSCSEG00000006789 ARHGAP42 (ENSCSEG00000006717) cntn5 (ENSCSEG00000006697) epha4a (ENSCSEG00000006677) pxylp1 (ENSCSEG00000006664) SLC25A36 (ENSCSEG00000006649) ##22 spsb4a (ENSCSEG00000006639) ##23 panx1a (ENSCSEG00000006624) ENSCSEG00000006620 clns1a (ENSCSEG00000006611) aqp11 (ENSCSEG00000006605) pak1 (ENSCSEG00000006576) GDPD4 (ENSCSEG00000006568) myo7aa (ENSCSEG00000006533) ompa (ENSCSEG00000006525) CAPN5 (ENSCSEG00000006517) dcun1d5 (ENSCSEG00000006513) CUL5 (ENSCSEG00000006499) SLC35F2 (ENSCSEG00000006494) flot2b (ENSCSEG00000006488) FAM222B (ENSCSEG00000006481) Turbot MODERN SPECIES 15 ENSSMAG00000020563 ENSSMAG00000020589 prss16 (ENSSMAG00000020598) serpine2 (ENSSMAG00000020601) wdfy1 (ENSSMAG00000020603) dhrs12la (ENSSMAG00000020608) ENSSMAG00000020660 kcne4 (ENSSMAG00000020661) acsl3a (ENSSMAG00000020663) farsb (ENSSMAG00000020668) ENSSMAG00000020677 SGPP2 (ENSSMAG00000020680) ENSSMAG00000020682 pax3b (ENSSMAG00000020683) EPHA4 (ENSSMAG00000020688) ENSSMAG00000020692 ##22 pxylp1 (ENSSMAG00000020689) ENSSMAG00000020694 ##23 ENSSMAG00000027874 ENSSMAG00000020698 ##25 ENSSMAG00000020702 RBP2 (ENSSMAG00000025467) ##28 COPB2 (ENSSMAG00000020707) ##29 MRPS22 (ENSSMAG00000020714) PIK3CB (ENSSMAG00000000112) ENSSMAG00000000129 ENSSMAG00000029620 ENSSMAG00000000161 ENSSMAG00000000166 ENSSMAG00000000194 ENSSMAG00000000173 Ovalentaria ANCESTRAL SPECIES 8 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 Atherinomorphae ANCESTRAL SPECIES 15 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 Cyprinodontiformes ANCESTRAL SPECIES 12 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 Cyprinodontoidei ANCESTRAL SPECIES 9 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 Poeciliinae ANCESTRAL SPECIES 14 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000162556.C.c ##24 ENSGT00940000161289 ENSGT00530000063405.b.e ENSGT00940000162996.y.a.b.a ENSGT00510000047299.d ENSGT00940000160721 Poecilia ANCESTRAL SPECIES 2 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000162556.C.c ##24 ENSGT00940000161289 ENSGT00530000063405.b.e ENSGT00940000162996.y.a.b.a ENSGT00940000162996.y.a.a.c.a.a ENSGT00510000047299.d NAME_6 ANCESTRAL SPECIES 60 ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000162556.C.c ##24 ENSGT00940000161289 ENSGT00530000063405.b.e ENSGT00940000162996.y.a.b.a ENSGT00940000162996.y.a.b.b.b ENSGT00940000162996.y.a.a.c.a.a Amazon molly MODERN SPECIES 325 pxylp1 (ENSPFOG00000008537) SLC25A36 (ENSPFOG00000008439) ##22 spsb4a (ENSPFOG00000008391) ##23 CLSTN2 (ENSPFOG00000007669) ##25 lpar5b (ENSPFOG00000020309) rbp2a (ENSPFOG00000007568) ##28 ENSPFOG00000007552 COPB2 (ENSPFOG00000007284) ##29 mrps22 (ENSPFOG00000007141) foxl2b (ENSPFOG00000020308) PIK3CB (ENSPFOG00000006566) PER2 (ENSPFOG00000006138) ENSPFOG00000006124 ##24 usp2a (ENSPFOG00000005925) tbcela (ENSPFOG00000005811) ENSPFOG00000022258 ENSPFOG00000004739 Sailfin molly MODERN SPECIES 695 pxylp1 (ENSPLAG00000008564) SLC25A36 (ENSPLAG00000008595) ##22 spsb4a (ENSPLAG00000008604) ##23 Guppy MODERN SPECIES 443 psmd2 (ENSPREG00000010322) serpine2 (ENSPREG00000010402) wdfy1 (ENSPREG00000010455) dhrs12la (ENSPREG00000010484) AP1S3 (ENSPREG00000010517) ENSPREG00000010524 kcne4 (ENSPREG00000010533) acsl3a (ENSPREG00000010542) farsb (ENSPREG00000010583) ENSPREG00000010621 SGPP2 (ENSPREG00000010631) ENSPREG00000010649 pax3b (ENSPREG00000010656) epha4a (ENSPREG00000010744) pxylp1 (ENSPREG00000010798) SLC25A36 (ENSPREG00000010816) ##22 spsb4a (ENSPREG00000010844) ##23 CLSTN2 (ENSPREG00000010875) ##25 lpar5b (ENSPREG00000010933) ENSPREG00000010948 rbp2a (ENSPREG00000010960) ##28 ENSPREG00000010971 COPB2 (ENSPREG00000010996) ##29 mrps22 (ENSPREG00000011070) PIK3CB (ENSPREG00000011211) PER2 (ENSPREG00000011271) ENSPREG00000011295 usp2a (ENSPREG00000011319) tbcela (ENSPREG00000011348) ENSPREG00000011380 ENSPREG00000011466 Platyfish MODERN SPECIES 9 prss16 (ENSXMAG00000008194) serpine2 (ENSXMAG00000008196) wdfy1 (ENSXMAG00000008220) dhrs12la (ENSXMAG00000008246) ENSXMAG00000008263 AP1S3 (ENSXMAG00000008255) kcne4 (ENSXMAG00000008266) acsl3a (ENSXMAG00000008269) ENSXMAG00000029278 farsb (ENSXMAG00000008280) ENSXMAG00000021789 SGPP2 (ENSXMAG00000008302) pax3b (ENSXMAG00000008304) epha4a (ENSXMAG00000008306) pxylp1 (ENSXMAG00000008348) SLC25A36 (ENSXMAG00000008353) ##22 spsb4a (ENSXMAG00000008361) ##23 CLSTN2 (ENSXMAG00000008362) ##25 lpar5b (ENSXMAG00000020218) rbp2a (ENSXMAG00000006544) ##28 COPB2 (ENSXMAG00000006552) ##29 mrps22 (ENSXMAG00000006580) ENSXMAG00000029209 foxl2b (ENSXMAG00000020219) PIK3CB (ENSXMAG00000006594) PER2 (ENSXMAG00000006651) ENSXMAG00000006705 ##24 usp2a (ENSXMAG00000006708) tbcela (ENSXMAG00000006724) ENSXMAG00000006737 PGAP2 (ENSXMAG00000006831) NAME_4 ANCESTRAL SPECIES 102 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00940000163911.a.a.a.s ENSGT00940000163911.a.a.b.a.a.a.b.d.a.a Mummichog MODERN SPECIES 2202 prss16 (ENSFHEG00000021150) serpine2 (ENSFHEG00000021132) wdfy1 (ENSFHEG00000021120) dhrs12la (ENSFHEG00000021061) AP1S3 (ENSFHEG00000021028) ENSFHEG00000021018 kcne4 (ENSFHEG00000020998) acsl3a (ENSFHEG00000020987) farsb (ENSFHEG00000020939) ENSFHEG00000020916 SGPP2 (ENSFHEG00000020896) ENSFHEG00000020864 pax3b (ENSFHEG00000020858) epha4a (ENSFHEG00000020823) pxylp1 (ENSFHEG00000020749) SLC25A36 (ENSFHEG00000020736) ##22 spsb4a (ENSFHEG00000020702) ##23 CLSTN2 (ENSFHEG00000020690) ##25 lpar5b (ENSFHEG00000020648) rbp2a (ENSFHEG00000020640) ##28 ENSFHEG00000020604 ##29 COPB2 (ENSFHEG00000020594) ##29 mrps22 (ENSFHEG00000020557) foxl2b (ENSFHEG00000020548) ENSFHEG00000020532 PIK3CB (ENSFHEG00000020512) PER2 (ENSFHEG00000020488) ENSFHEG00000020468 Sheepshead minnow MODERN SPECIES 73 SLC25A36 (ENSCVAG00000021401) ##22 Aplocheiloidei ANCESTRAL SPECIES 246 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00390000006095 ENSGT00940000157522.b ENSGT00940000156342.d ENSGT00940000161398.e Mangrove rivulus MODERN SPECIES 62 ENSKMAG00000003188 lhx1a (ENSKMAG00000003163) bcas3 (ENSKMAG00000003039) tbx2b (ENSKMAG00000002976) tbx4 (ENSKMAG00000002942) brip1 (ENSKMAG00000002856) PPM1D (ENSKMAG00000002841) appbp2 (ENSKMAG00000002779) ENSKMAG00000002765 USP6 (ENSKMAG00000002625) ENSKMAG00000002543 tmem97 (ENSKMAG00000002514) ULK2 (ENSKMAG00000002479) aldh3a2a (ENSKMAG00000002434) ENSKMAG00000002417 SLC25A36 (ENSKMAG00000002380) ##22 spsb4a (ENSKMAG00000002358) ##23 ENSKMAG00000002334 CLSTN2 (ENSKMAG00000002240) ##25 lpar5b (ENSKMAG00000002207) rbp2a (ENSKMAG00000002179) ##28 mrps22 (ENSKMAG00000002163) foxl2b (ENSKMAG00000002135) PIK3CB (ENSKMAG00000002028) PER2 (ENSKMAG00000001995) her13 (ENSKMAG00000001975) Turquoise killifish MODERN SPECIES 1085 SLC25A36 (ENSNFUG00015018450) ##22 Oryzias ANCESTRAL SPECIES 8 ENSGT00950000183078.b.a.b ENSGT00950000182929.A ENSGT00940000163374 ENSGT00940000157786 ENSGT00940000157676 ENSGT00940000155162.o.b ENSGT00940000163520.B.g ENSGT00940000163520.A.b.b.b.b ENSGT00940000163520.A.b.b.a ENSGT00940000162978.a.b ENSGT00940000162775 ENSGT00940000154525.b.b ENSGT00940000165141.a ENSGT00940000159302 ENSGT00390000017365.b ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00540000072704 ENSGT00940000157083 ENSGT00390000014712.a.g.a ENSGT00940000157853.a Oryzias_b ANCESTRAL SPECIES 38 ENSGT00950000183078.b.a.b ENSGT00950000182929.A ENSGT00940000163374 ENSGT00940000157786 ENSGT00940000157676 ENSGT00940000155162.o.b ENSGT00940000163520.B.g ENSGT00940000163520.A.b.b.b.b ENSGT00940000163520.A.b.b.a ENSGT00940000162978.a.b ENSGT00940000162775 ENSGT00940000154525.b.b ENSGT00940000165141.a ENSGT00940000159302 ENSGT00390000017365.b ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00540000072704 ENSGT00940000157083 ENSGT00390000014712.a.g.a ENSGT00940000157853.a Indian medaka MODERN SPECIES 19 rps4x (ENSOMEG00000020132) cited1 (ENSOMEG00000020143) hdac8 (ENSOMEG00000020217) sycp3 (ENSOMEG00000020251) ENSOMEG00000020344 leap2 (ENSOMEG00000020370) ENSOMEG00000020380 ENSOMEG00000020389 ENSOMEG00000020407 ENSOMEG00000020415 ENSOMEG00000020449 hnrnpc (ENSOMEG00000020488) ndrg2 (ENSOMEG00000020643) ENSOMEG00000020724 ENSOMEG00000021257 SLC25A36 (ENSOMEG00000021336) ##22 spsb4a (ENSOMEG00000021373) ##23 ENSOMEG00000021411 znf219 (ENSOMEG00000021440) ENSOMEG00000021462 btr12 (ENSOMEG00000021478) ENSOMEG00000021652 ENSOMEG00000021736 ENSOMEG00000021768 ENSOMEG00000021780 ENSOMEG00000021794 ENSOMEG00000021810 ENSOMEG00000021820 ENSOMEG00000021859 ENSOMEG00000021875 ENSOMEG00000021881 Javanese ricefish MODERN SPECIES 4 SIK3 (ENSOJAG00000010711) SIDT2 (ENSOJAG00000010763) CEP164 (ENSOJAG00000011238) apoa1b (ENSOJAG00000011266) ENSOJAG00000011303 bace1 (ENSOJAG00000011345) pcsk7 (ENSOJAG00000011470) tagln (ENSOJAG00000012135) ENSOJAG00000012154 cbln20 (ENSOJAG00000012243) ENSOJAG00000012260 nudt8 (ENSOJAG00000012280) ENSOJAG00000012290 pnkp (ENSOJAG00000012584) zgc:162193 (ENSOJAG00000013822) SLC25A36 (ENSOJAG00000013846) ##22 spsb4a (ENSOJAG00000013867) ##23 CLSTN2 (ENSOJAG00000013906) ##25 lpar5b (ENSOJAG00000014509) ENSOJAG00000014518 rbp2a (ENSOJAG00000014549) ##28 COPB2 (ENSOJAG00000014602) ##29 mrps22 (ENSOJAG00000014852) PIK3CB (ENSOJAG00000014934) PER2 (ENSOJAG00000015635) her13 (ENSOJAG00000016109) her8.2 (ENSOJAG00000016131) ENSOJAG00000016142 usf1l (ENSOJAG00000016387) ENSOJAG00000016398 abcg4b (ENSOJAG00000016402) Oryzias_a ANCESTRAL SPECIES 51 ENSGT00950000183078.b.a.b ENSGT00950000182929.A ENSGT00940000163374 ENSGT00940000157786 ENSGT00940000157676 ENSGT00940000155162.o.b ENSGT00940000163520.B.g ENSGT00940000163520.A.b.b.b.b ENSGT00940000163520.A.b.b.a ENSGT00940000162978.a.b ENSGT00940000162775 ENSGT00940000154525.b.b ENSGT00940000165141.a ENSGT00940000159302 ENSGT00390000017365.b ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00540000072704 ENSGT00940000157083 ENSGT00390000014712.a.g.a ENSGT00940000157853.a Japanese Medaka HdrR MODERN SPECIES 4 apoa1b (ENSORLG00000015744) ENSORLG00000028989 ENSORLG00000015728 bace1 (ENSORLG00000025617) pcsk7 (ENSORLG00000015722) tagln (ENSORLG00000015714) ENSORLG00000021874 cbln20 (ENSORLG00000015708) cbln20 (ENSORLG00000015707) ENSORLG00000015701 nudt8 (ENSORLG00000015682) MFRP (ENSORLG00000015680) ENSORLG00000015672 pnkp (ENSORLG00000015667) zgc:162193 (ENSORLG00000015653) ENSORLG00000015639 ##22 spsb4a (ENSORLG00000015620) ##23 ENSORLG00000015614 ##25 lpar5b (ENSORLG00000015601) rbp2a (ENSORLG00000022031) ##28 COPB2 (ENSORLG00000015574) ##29 mrps22 (ENSORLG00000015543) foxl2a (ENSORLG00000020203) PIK3CB (ENSORLG00000015529) her13 (ENSORLG00000015432) PER2 (ENSORLG00000015456) her8.2 (ENSORLG00000015428) ENSORLG00000026928 ENSORLG00000022288 ENSORLG00000015424 gkup (ENSORLG00000025988) Chinese medaka MODERN SPECIES 1060 ENSOSIG00000003101 SIK3 (ENSOSIG00000003169) SIDT2 (ENSOSIG00000005029) ENSOSIG00000005248 pcsk7 (ENSOSIG00000005269) ENSOSIG00000005840 bace1 (ENSOSIG00000005850) tagln (ENSOSIG00000005871) ENSOSIG00000005876 cbln20 (ENSOSIG00000005879) cbln20 (ENSOSIG00000005881) ENSOSIG00000005884 nudt8 (ENSOSIG00000005885) ENSOSIG00000005887 zgc:162193 (ENSOSIG00000005890) SLC25A36 (ENSOSIG00000005892) ##22 spsb4a (ENSOSIG00000005910) ##23 CLSTN2 (ENSOSIG00000005916) ##25 Ovalentaria_B ANCESTRAL SPECIES 11 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Cichlidae ANCESTRAL SPECIES 33 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000162403 ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d.a.a.b ENSGT00950000183136.b.b.d.b ENSGT00950000183136.b.b.d.a.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 22 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000162403 ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d.a.a.a ENSGT00950000183136.b.b.d.a.a.b.b ENSGT00950000183136.b.b.d.a.a.b.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 25 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000162403 ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d.a.a.a ENSGT00950000183136.b.b.d.a.a.b.b ENSGT00950000183136.b.b.d.a.a.b.a Haplochromini ANCESTRAL SPECIES 35 ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT01100000263520.a.b.a.a.a.b.a.b.c.d.a.a.a ENSGT00940000154907.a.a.x.b ENSGT00970000193449 ENSGT00950000183014.f.a ENSGT00940000162403 ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d.a.a.a.a.a ENSGT00950000183136.b.b.d.a.a.a.a.b ENSGT00950000183136.b.b.d.a.a.a.b Burton s mouthbrooder MODERN SPECIES 349 kcne4 (ENSHBUG00000022240) ENSHBUG00000022286 ENSHBUG00000022296 farsb (ENSHBUG00000022379) SGPP2 (ENSHBUG00000022394) ENSHBUG00000022407 pax3b (ENSHBUG00000022451) epha4a (ENSHBUG00000022511) pxylp1 (ENSHBUG00000022527) SLC25A36 (ENSHBUG00000022561) ##22 spsb4a (ENSHBUG00000022597) ##23 ENSHBUG00000022617 CLSTN2 (ENSHBUG00000022673) ##25 lpar5b (ENSHBUG00000022688) rbp2a (ENSHBUG00000022702) ##28 COPB2 (ENSHBUG00000022803) ##29 mrps22 (ENSHBUG00000022826) PIK3CB (ENSHBUG00000023142) PER2 (ENSHBUG00000000709) her13 (ENSHBUG00000023176) her8.2 (ENSHBUG00000023184) ENSHBUG00000023216 ITM2C (ENSHBUG00000023261) lpar5b (ENSHBUG00000023274) lpar5b (ENSHBUG00000023292) Haplochromini_A ANCESTRAL SPECIES 40 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d.a.a.a.a.a ENSGT00950000183136.b.b.d.a.a.b.a ENSGT00950000183136.b.b.d.b P. nyererei MODERN SPECIES 378 wdfy1 (ENSPNYG00000011057) dhrs12la (ENSPNYG00000011099) AP1S3 (ENSPNYG00000011149) ENSPNYG00000011372 kcne4 (ENSPNYG00000011382) acsl3a (ENSPNYG00000011402) farsb (ENSPNYG00000011433) ENSPNYG00000011468 ENSPNYG00000011481 SGPP2 (ENSPNYG00000011492) ENSPNYG00000011511 pax3b (ENSPNYG00000011527) ENSPNYG00000011554 epha4a (ENSPNYG00000011571) pxylp1 (ENSPNYG00000011653) SLC25A36 (ENSPNYG00000011731) ##22 spsb4a (ENSPNYG00000011766) ##23 CLSTN2 (ENSPNYG00000011806) ##25 lpar5b (ENSPNYG00000011904) rbp2a (ENSPNYG00000011924) ##28 COPB2 (ENSPNYG00000011944) ##29 mrps22 (ENSPNYG00000011985) foxl2b (ENSPNYG00000012072) PIK3CB (ENSPNYG00000012104) PER2 (ENSPNYG00000012204) her13 (ENSPNYG00000012240) her8.2 (ENSPNYG00000012263) ENSPNYG00000012316 ITM2C (ENSPNYG00000012355) lpar5b (ENSPNYG00000012388) Haplochromini_B ANCESTRAL SPECIES 9 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d.a.a.a.a.a ENSGT00950000183136.b.b.d.a.a.b.a ENSGT00950000183136.b.b.d.b.a.a Eastern happy MODERN SPECIES 5 dhrs12la (ENSACLG00000014210) ENSACLG00000014191 AP1S3 (ENSACLG00000014183) kcne4 (ENSACLG00000014128) acsl3a (ENSACLG00000014060) ENSACLG00000014051 farsb (ENSACLG00000013951) SGPP2 (ENSACLG00000013928) ENSACLG00000013923 pax3b (ENSACLG00000013881) ENSACLG00000013809 epha4a (ENSACLG00000013751) ENSACLG00000013740 ENSACLG00000013580 pxylp1 (ENSACLG00000013559) SLC25A36 (ENSACLG00000013526) ##22 spsb4a (ENSACLG00000013515) ##23 ENSACLG00000013213 ENSACLG00000013208 ENSACLG00000013193 CLSTN2 (ENSACLG00000013110) ##25 lpar5b (ENSACLG00000012853) rbp2a (ENSACLG00000012843) ##28 COPB2 (ENSACLG00000012761) ##29 mrps22 (ENSACLG00000012727) PIK3CB (ENSACLG00000012502) PER2 (ENSACLG00000012344) her13 (ENSACLG00000012297) her8.2 (ENSACLG00000012275) ENSACLG00000012262 ITM2C (ENSACLG00000012210) Zebra mbuna MODERN SPECIES 1096 ENSMZEG00005004351 gemin4 (ENSMZEG00005004438) TLCD3A (ENSMZEG00005004444) usp2a (ENSMZEG00005004453) TBCEL (ENSMZEG00005004478) kcne4 (ENSMZEG00005004495) ENSMZEG00005004509 farsb (ENSMZEG00005004544) ENSMZEG00005004588 ENSMZEG00005004594 SGPP2 (ENSMZEG00005004600) ENSMZEG00005004622 pax3b (ENSMZEG00005004628) epha4a (ENSMZEG00005004684) pxylp1 (ENSMZEG00005004789) SLC25A36 (ENSMZEG00005004803) ##22 spsb4a (ENSMZEG00005004837) ##23 ENSMZEG00005004855 CLSTN2 (ENSMZEG00005004867) ##25 ENSMZEG00005004907 rbp2a (ENSMZEG00005004916) ##28 COPB2 (ENSMZEG00005004942) ##29 mrps22 (ENSMZEG00005005002) foxl2a (ENSMZEG00005005026) nop53 (ENSMZEG00005005033) ENSMZEG00005005051 ENSMZEG00005005059 psma6l (ENSMZEG00005005071) ENSMZEG00005005107 sars2 (ENSMZEG00005005189) si:dkey-260j18.2 (ENSMZEG00005005293) Lyretail cichlid MODERN SPECIES 367 prss16 (ENSNBRG00000003861) serpine2 (ENSNBRG00000003846) wdfy1 (ENSNBRG00000003804) AP1S3 (ENSNBRG00000003658) ENSNBRG00000003634 kcne4 (ENSNBRG00000003631) acsl3a (ENSNBRG00000003327) ENSNBRG00000003270 farsb (ENSNBRG00000003198) SGPP2 (ENSNBRG00000003149) ENSNBRG00000003132 pax3b (ENSNBRG00000003096) epha4a (ENSNBRG00000003033) pxylp1 (ENSNBRG00000002984) ENSNBRG00000002963 SLC25A36 (ENSNBRG00000002942) ##22 CLSTN2 (ENSNBRG00000002891) ##25 lpar5b (ENSNBRG00000002874) rbp2a (ENSNBRG00000002854) ##28 COPB2 (ENSNBRG00000002788) ##29 mrps22 (ENSNBRG00000002593) PIK3CB (ENSNBRG00000002386) PER2 (ENSNBRG00000002361) her13 (ENSNBRG00000002345) her8.2 (ENSNBRG00000002319) ENSNBRG00000002297 ITM2C (ENSNBRG00000002259) lpar5b (ENSNBRG00000002226) lpar5b (ENSNBRG00000002212) ENSNBRG00000002192 meis3 (ENSNBRG00000002156) Nile tilapia MODERN SPECIES 5 psmd2 (ENSONIG00000010770) prss16 (ENSONIG00000010768) serpine2 (ENSONIG00000010765) wdfy1 (ENSONIG00000014648) dhrs12la (ENSONIG00000014649) ENSONIG00000014647 kcne4 (ENSONIG00000014646) acsl3a (ENSONIG00000014644) farsb (ENSONIG00000014639) ENSONIG00000036757 SGPP2 (ENSONIG00000014638) ENSONIG00000037185 pax3b (ENSONIG00000014632) epha4a (ENSONIG00000014623) pxylp1 (ENSONIG00000030369) SLC25A36 (ENSONIG00000014617) ##22 spsb4a (ENSONIG00000014616) ##23 CLSTN2 (ENSONIG00000014608) ##25 ENSONIG00000034460 lpar5b (ENSONIG00000020974) rbp2a (ENSONIG00000014606) ##28 COPB2 (ENSONIG00000014597) ##29 mrps22 (ENSONIG00000014596) ENSONIG00000033377 PIK3CB (ENSONIG00000007924) PER2 (ENSONIG00000007937) ENSONIG00000039254 her13 (ENSONIG00000035460) her8.2 (ENSONIG00000007948) ENSONIG00000007949 ITM2C (ENSONIG00000007951) Midas cichlid MODERN SPECIES 1208 ENSACIG00000007678 SLC25A36 (ENSACIG00000007655) ##22 spsb4a (ENSACIG00000007648) ##23 CLSTN2 (ENSACIG00000007501) ##25 Pomacentridae ANCESTRAL SPECIES 5 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Bicolor damselfish MODERN SPECIES 1489 pxylp1 (ENSSPAG00000017892) SLC25A36 (ENSSPAG00000017838) ##22 spsb4a (ENSSPAG00000017828) ##23 Pomacentridae_A ANCESTRAL SPECIES 4 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d ENSGT00940000160281 ENSGT00940000161057 Amphiprion ANCESTRAL SPECIES 6 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00970000193381.a.a.a.a.b.b.a.b.f.a.a.a ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b.d.c ENSGT01040000240444.A.a.a.b Orange clownfish MODERN SPECIES 23 psmd2 (ENSAPEG00000001498) prss16 (ENSAPEG00000001482) serpine2 (ENSAPEG00000001453) wdfy1 (ENSAPEG00000001381) dhrs12la (ENSAPEG00000001325) SCG2 (ENSAPEG00000001314) AP1S3 (ENSAPEG00000001305) kcne4 (ENSAPEG00000001287) acsl3a (ENSAPEG00000001224) farsb (ENSAPEG00000001153) SGPP2 (ENSAPEG00000001108) ENSAPEG00000001098 pax3b (ENSAPEG00000001057) epha4a (ENSAPEG00000000975) pxylp1 (ENSAPEG00000000923) SLC25A36 (ENSAPEG00000000858) ##22 spsb4a (ENSAPEG00000000845) ##23 ENSAPEG00000000779 CLSTN2 (ENSAPEG00000000726) ##25 lpar5b (ENSAPEG00000000689) rbp2a (ENSAPEG00000000675) ##28 ENSAPEG00000000653 ##29 COPB2 (ENSAPEG00000000555) ##29 mrps22 (ENSAPEG00000000548) PIK3CB (ENSAPEG00000000351) PER2 (ENSAPEG00000000330) her13 (ENSAPEG00000024634) her8.2 (ENSAPEG00000024633) ENSAPEG00000024631 ENSAPEG00000024629 ENSAPEG00000024627 Clown anemonefish MODERN SPECIES 2165 pxylp1 (ENSAOCG00000000768) SLC25A36 (ENSAOCG00000012499) ##22 spsb4a (ENSAOCG00000012541) ##23 SLC4A1AP (ENSAOCG00000012568) supt7l (ENSAOCG00000012589) Spiny chromis MODERN SPECIES 407 pxylp1 (ENSAPOG00000020055) SLC25A36 (ENSAPOG00000020029) ##22 spsb4a (ENSAPOG00000019979) ##23 Pinecone sodierfish MODERN SPECIES 4 psmd2 (ENSMMDG00005019038) prss16 (ENSMMDG00005019100) serpine2 (ENSMMDG00005019108) wdfy1 (ENSMMDG00005019117) dhrs12la (ENSMMDG00005019127) ENSMMDG00005019130 kcne4 (ENSMMDG00005019132) acsl3a (ENSMMDG00005019162) farsb (ENSMMDG00005001237) ENSMMDG00005001539 SGPP2 (ENSMMDG00005001557) ENSMMDG00005001621 pax3b (ENSMMDG00005001645) epha4a (ENSMMDG00005001794) pxylp1 (ENSMMDG00005003638) SLC25A36 (ENSMMDG00005003650) ##22 spsb4a (ENSMMDG00005003678) ##23 CLSTN2 (ENSMMDG00005003696) ##25 lpar5b (ENSMMDG00005003739) rbp2a (ENSMMDG00005003743) ##28 COPB2 (ENSMMDG00005003752) ##29 mrps22 (ENSMMDG00005003761) PIK3CB (ENSMMDG00005003879) ENSMMDG00005007371 her13 (ENSMMDG00005008258) her8.2 (ENSMMDG00005008260) ENSMMDG00005008264 ITM2C (ENSMMDG00005008270) lpar5b (ENSMMDG00005008271) ENSMMDG00005008273 ENSMMDG00005008275 Cod MODERN SPECIES 7 ENSGMOG00000034276 ENSGMOG00000008966 ENSGMOG00000029247 kcnj13 (ENSGMOG00000030777) ENSGMOG00000009010 ENSGMOG00000009019 tpst1 (ENSGMOG00000009059) tnfaip1 (ENSGMOG00000009025) ENSGMOG00000009038 aldh3a2a (ENSGMOG00000009087) ENSGMOG00000030909 ENSGMOG00000014227 ENSGMOG00000024699 ENSGMOG00000023021 pxylp1 (ENSGMOG00000025794) ENSGMOG00000001882 ##22 ENSGMOG00000008804 ##23 ENSGMOG00000008822 ##25 ENSGMOG00000028813 ENSGMOG00000022668 RBP2 (ENSGMOG00000013916) ##28 COPB2 (ENSGMOG00000013927) ##29 MRPS22 (ENSGMOG00000013972) PIK3CB (ENSGMOG00000013996) ENSGMOG00000014046 ENSGMOG00000027451 ENSGMOG00000028584 ENSGMOG00000033018 ENSGMOG00000029526 ENSGMOG00000014166 ENSGMOG00000010627 Protacanthopterygii ANCESTRAL SPECIES 15 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00940000175263 ENSGT01030000235000 ENSGT01030000234582.e.a ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j.a ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.b ##23 ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00940000160165.a ##28 ENSGT00900000141083.c.b ##29 ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b ENSGT01040000240444.A.b.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 588 ENSGT00390000016324.n.a ENSGT00940000154369.g.b.a ##22 ENSGT01030000234629.C.b.a ##23 ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a.b.b ##25 ENSGT00950000183086.a.a.b.h.a.a ##25 ENSGT00940000160165.a.c ##28 ENSGT00900000141083.c.b.c ##29 ENSGT00390000006095.d ENSGT00940000162075.db.b.a ENSGT00940000157522.d.b ENSGT00940000157522.d.a.b ENSGT00940000161398.e.a ENSGT00940000164578.a.a.a ENSGT00390000004360.a.a.b ENSGT00950000183115.a.a.a.b Huchen MODERN SPECIES 1548 pxylp1 (ENSHHUG00000036325) SLC25A36 (ENSHHUG00000036314) ##22 spsb4a (ENSHHUG00000036312) ##23 ENSHHUG00000036301 ##25 Salmoninae_a ANCESTRAL SPECIES 3 ENSGT00940000164087 ENSGT00940000158424.c ENSGT00940000157731.e.a ENSGT00940000165979.a ENSGT00940000157731.f.a ENSGT00390000010895.a.a ENSGT00390000013776.d ENSGT00940000155954.b.a ENSGT01030000234582.e.a.wc.b ENSGT00530000063489.a.c ENSGT00940000159500.j ENSGT00940000166595.b.d ENSGT00940000156504.i.a.f ENSGT00940000156948.j.a.b ENSGT00390000016324.m.a ENSGT00940000154369.g.b.a ##22 ENSGT01030000234629.C.b.a ##23 ENSGT00530000064220.a ENSGT00950000183086.a.a.b.h.a.a ##25 ENSGT00940000160165.a.c ##28 ENSGT00900000141083.c.b.c ##29 ENSGT00390000006095.d ENSGT00940000162075.db.b.a ENSGT00940000157522.d.b ENSGT00940000161398.e.a ENSGT00940000164578.a.a.a ENSGT00390000004360.a.a.b ENSGT00950000183115.a.a.a.b ENSGT00950000183136.b.b.i.b ENSGT01040000240444.A.b.b.e.b ENSGT01030000234571.b.b.a.a.a.b Oncorhynchus ANCESTRAL SPECIES 14 ENSGT00940000153386.B.i ENSGT00940000164087 ENSGT00940000158424.c ENSGT00940000165979.a ENSGT00940000157731.f.a ENSGT00390000010895.a.a ENSGT00390000013776.d ENSGT00940000155954.b.a ENSGT01030000234582.e.a.wc.b ENSGT00530000063489.a.c ENSGT00940000159500.j ENSGT00940000166595.b.d ENSGT00940000156504.i.a.f ENSGT00940000156948.j.a.b ENSGT00390000016324.m.a ENSGT00940000154369.g.b.a ##22 ENSGT01030000234629.C.b.a ##23 ENSGT00530000064220.a ENSGT00950000183086.a.a.b.h.a.a ##25 ENSGT00940000160165.a.c ##28 ENSGT00900000141083.c.b.c ##29 ENSGT00940000157522.d.a.a ENSGT00940000161398.e.a ENSGT00940000164578.a.a.a ENSGT00390000004360.a.a.b ENSGT00950000183115.a.a.a.b ENSGT00950000183136.b.b.i.b ENSGT01040000240444.A.b.b.e.b ENSGT01030000234571.b.b.a.a.a.b ENSGT00390000012058.c.a.d ENSGT00990000203615.b.a.b.f Oncorhynchus_a ANCESTRAL SPECIES 32 ENSGT00940000153386.B.i ENSGT00940000164087.e ENSGT00940000158424.c ENSGT00940000165979.a ENSGT00940000157731.f.a ENSGT00390000010895.a.a ENSGT00390000013776.d ENSGT00940000155954.b.a ENSGT01030000234582.e.a.wc.b ENSGT00530000063489.a.c ENSGT00940000159500.j ENSGT00940000166595.b.d ENSGT00940000156504.i.a.f ENSGT00940000156948.j.a.b ENSGT00390000016324.m.a ENSGT00940000154369.g.b.a ##22 ENSGT01030000234629.C.b.a ##23 ENSGT00530000064220.a ENSGT00950000183086.a.a.b.h.a.a ##25 ENSGT00940000160165.a.c ##28 ENSGT00900000141083.c.b.c ##29 ENSGT00940000157522.d.a.a ENSGT00940000161398.e.a ENSGT00940000164578.a.a.a ENSGT00390000004360.a.a.b ENSGT00950000183115.a.a.a.b ENSGT00950000183136.b.b.i.b ENSGT01040000240444.A.b.b.e.b ENSGT01030000234571.b.b.a.a.a.b ENSGT00390000012058.c.a.d ENSGT00990000203615.b.a.b.f Coho salmon MODERN SPECIES 6 prss16 (ENSOKIG00005033142) serpine2 (ENSOKIG00005033223) wdfy1 (ENSOKIG00005033259) dhrs12la (ENSOKIG00005033327) ENSOKIG00005033654 kcne4 (ENSOKIG00005033667) acsl3a (ENSOKIG00005033681) ENSOKIG00005033822 MOGAT1 (ENSOKIG00005033840) farsb (ENSOKIG00005033852) SGPP2 (ENSOKIG00005033954) ENSOKIG00005033983 pax3b (ENSOKIG00005033994) EPHA4 (ENSOKIG00005034081) pxylp1 (ENSOKIG00005034194) SLC25A36 (ENSOKIG00005034220) ##22 spsb4a (ENSOKIG00005034305) ##23 ENSOKIG00005034314 CLSTN2 (ENSOKIG00005034370) ##25 RBP2 (ENSOKIG00005034789) ##28 ENSOKIG00005034810 COPB2 (ENSOKIG00005034824) ##29 ENSOKIG00005034947 ENSOKIG00005034995 ENSOKIG00005035105 PIK3CB (ENSOKIG00005035228) her13 (ENSOKIG00005036977) her8.2 (ENSOKIG00005036998) ENSOKIG00005037011 ITM2C (ENSOKIG00005037042) lpar5b (ENSOKIG00005037066) Chinook salmon MODERN SPECIES 4 smc4 (ENSOTSG00005033673) ENSOTSG00005033659 ENSOTSG00005033658 HES6 (ENSOTSG00005033657) her8.2 (ENSOTSG00005033653) ENSOTSG00005033646 ITM2C (ENSOTSG00005033643) lpar5b (ENSOTSG00005033642) gpr55a (ENSOTSG00005033641) NGEF (ENSOTSG00005033262) efhd1 (ENSOTSG00005033260) kcnj13 (ENSOTSG00005033259) GAL3ST2 (ENSOTSG00005033258) dok1b (ENSOTSG00005033257) ENSOTSG00005033255 SLC25A36 (ENSOTSG00005033254) ##22 spsb4a (ENSOTSG00005033252) ##23 ENSOTSG00005033250 ##25 ENSOTSG00005033247 ENSOTSG00005033242 chrd (ENSOTSG00005033240) alp3 (ENSOTSG00005037268) ENSOTSG00005037262 PSMD2 (ENSOTSG00005037069) prss16 (ENSOTSG00005037067) dhrs12la (ENSOTSG00005037066) wdfy1 (ENSOTSG00005036581) SCG2 (ENSOTSG00005036580) kcne4 (ENSOTSG00005036579) acsl3a (ENSOTSG00005036578) MOGAT1 (ENSOTSG00005036575) Rainbow trout MODERN SPECIES 19 wdfy1 (ENSOMYG00000041744) dhrs12la (ENSOMYG00000041779) ENSOMYG00000067981 ENSOMYG00000053039 kcne4 (ENSOMYG00000045256) acsl3a (ENSOMYG00000062951) MOGAT1 (ENSOMYG00000045261) farsb (ENSOMYG00000045269) ENSOMYG00000075686 ENSOMYG00000045286 SGPP2 (ENSOMYG00000045289) ENSOMYG00000045293 pax3b (ENSOMYG00000045319) EPHA4 (ENSOMYG00000045497) pxylp1 (ENSOMYG00000045548) ENSOMYG00000045536 ##22 SPSB4 (ENSOMYG00000045534) ##23 ENSOMYG00000045523 ##25 ENSOMYG00000037636 ##28 ENSOMYG00000037604 ##29 ENSOMYG00000070221 ENSOMYG00000060003 ENSOMYG00000037526 ENSOMYG00000064208 ENSOMYG00000037470 ENSOMYG00000058394 ENSOMYG00000037364 ENSOMYG00000037359 ENSOMYG00000037347 ENSOMYG00000037339 lpar5b (ENSOMYG00000037327) Salmo ANCESTRAL SPECIES 7 ENSGT00940000164087 ENSGT00940000158424.c ENSGT00940000157731.e.a ENSGT00940000165979.a ENSGT00970000193372.b.a.b.a ENSGT00390000010895.a.a ENSGT00390000013776.d ENSGT00940000155954.b.a ENSGT01030000234582.e.a.wc.b ENSGT00530000063489.a.c ENSGT00940000159500.j ENSGT00940000166595.b.d ENSGT00940000156504.i.a.f ENSGT00940000156948.j.a.b ENSGT00390000016324.m.a ENSGT00940000154369.g.b.a ##22 ENSGT01030000234629.C.b.a ##23 ENSGT00950000183086.a.a.b.h.a.a ##25 ENSGT00940000160165.a.c ##28 ENSGT00900000141083.c.b.c ##29 ENSGT00390000006095.d ENSGT00940000162075.db.b.a ENSGT00940000157522.d.b ENSGT00940000161398.e.a ENSGT00940000164578.a.a.a ENSGT00390000004360.a.a.b ENSGT00950000183115.a.a.a.b ENSGT00950000183136.b.b.i.b ENSGT01040000240444.A.b.b.e.b ENSGT01030000234571.b.b.a.a.a.b ENSGT00390000012058.c.a.d Atlantic salmon MODERN SPECIES 12 wdfy1 (ENSSSAG00000078262) dhrs12la (ENSSSAG00000078330) AP1S3 (ENSSSAG00000106401) ENSSSAG00000097433 kcne4 (ENSSSAG00000092694) acsl3a (ENSSSAG00000090701) MOGAT1 (ENSSSAG00000006217) farsb (ENSSSAG00000006297) SGPP2 (ENSSSAG00000006428) ENSSSAG00000087087 pax3b (ENSSSAG00000006484) EPHA4 (ENSSSAG00000006756) ENSSSAG00000096046 ENSSSAG00000111346 acpl2 (ENSSSAG00000067856) ENSSSAG00000068023 ##22 ENSSSAG00000068016 ##23 ENSSSAG00000111589 ##25 ENSSSAG00000107920 COPB2 (ENSSSAG00000054694) ##29 mrps22 (ENSSSAG00000085488) ENSSSAG00000120199 PIK3CB (ENSSSAG00000044156) HES6 (ENSSSAG00000043968) ENSSSAG00000043963 ENSSSAG00000043918 ENSSSAG00000043844 gpr55a (ENSSSAG00000087199) ngef (ENSSSAG00000043373) ENSSSAG00000087441 ENSSSAG00000119253 River trout MODERN SPECIES 18 prss16 (ENSSTUG00000016559) serpine2 (ENSSTUG00000016576) wdfy1 (ENSSTUG00000016617) dhrs12la (ENSSTUG00000016709) SCG2 (ENSSTUG00000016849) kcne4 (ENSSTUG00000016852) acsl3a (ENSSTUG00000016868) ENSSTUG00000017223 ENSSTUG00000017231 farsb (ENSSTUG00000017360) ENSSTUG00000017986 ENSSTUG00000017993 pax3b (ENSSTUG00000018005) EPHA4 (ENSSTUG00000018120) pxylp1 (ENSSTUG00000018182) SLC25A36 (ENSSTUG00000018198) ##22 spsb4a (ENSSTUG00000018223) ##23 ENSSTUG00000018228 ##25 RBP2 (ENSSTUG00000018242) ##28 COPB2 (ENSSTUG00000018264) ##29 ENSSTUG00000018500 mrps22 (ENSSTUG00000018509) ENSSTUG00000018557 PIK3CB (ENSSTUG00000018608) ENSSTUG00000019232 her13 (ENSSTUG00000019266) her8.2 (ENSSTUG00000019275) ENSSTUG00000019280 ITM2C (ENSSTUG00000019293) lpar5b (ENSSTUG00000019342) gpr55a (ENSSTUG00000019362) Salmoninae ANCESTRAL SPECIES 493 ENSGT00390000010895.a.b ENSGT00390000013776.c ENSGT00940000155954.b.b.a.a ENSGT01030000234582.e.a.wc.a ENSGT00530000063489.a.d ENSGT00940000159500.i ENSGT01030000234582.e.a.wc.b ENSGT00530000063489.a.c ENSGT00940000159500.j ENSGT00940000166595.b ENSGT00940000156504.i.a.f ENSGT00940000156948.j.a.b ENSGT00390000016324.m ENSGT00940000156504.i.a.e ENSGT00940000156948.j.a.a ENSGT00940000154369.g.b.b ##22 ENSGT01030000234629.C.b.b ##23 Huchen MODERN SPECIES 4417 SLC25A36 (ENSHHUG00000044269) ##22 spsb4a (ENSHHUG00000044267) ##23 Salmoninae_a ANCESTRAL SPECIES 56 ENSGT00940000158424.d ENSGT00940000157731.e.b ENSGT00940000165979.b ENSGT00940000157731.f.b ENSGT00390000010895.a.b ENSGT00390000013776.c ENSGT00940000155954.b.b.b ENSGT00940000155954.b.b.a.a ENSGT01030000234582.e.a.wc.a ENSGT00530000063489.a.d ENSGT00940000159500.i ENSGT00940000166595.b.c ENSGT00940000156504.i.a.e ENSGT00940000156948.j.a.a ENSGT00390000016324.m.b ENSGT00940000154369.g.b.b ##22 ENSGT01030000234629.C.b.b ##23 ENSGT00530000064220.b ENSGT00950000183086.a.a.b.h.a.b.b ##25 ENSGT00940000160165.a.d ##28 ENSGT00900000141083.c.b.d ##29 ENSGT00390000006095.c ENSGT00940000162075.db.b.b ENSGT00940000157522.c ENSGT00940000161398.e.b ENSGT00940000164578.a.a.b ENSGT00390000004360.a.a.a ENSGT00950000183115.a.a.a.a ENSGT00950000183136.b.b.i.a ENSGT01040000240444.A.b.b.e.a ENSGT01030000234571.b.b.a.a.a.a Oncorhynchus ANCESTRAL SPECIES 57 ENSGT00940000154648.a.b.b ENSGT00940000153386.B.j ENSGT00940000158424.d ENSGT00940000165979.b ENSGT00940000157731.f.b ENSGT00390000010895.a.b ENSGT00390000013776.c ENSGT00940000155954.b.b.b ENSGT01030000234582.e.a.wc.a ENSGT00530000063489.a.d ENSGT00940000159500.i ENSGT00940000166595.b.c ENSGT00940000156504.i.a.e ENSGT00940000156948.j.a.a ENSGT00390000016324.m.b ENSGT00940000154369.g.b.b ##22 ENSGT01030000234629.C.b.b ##23 ENSGT00530000064220.b ENSGT00950000183086.a.a.b.h.a.b.b ##25 ENSGT00940000160165.a.d ##28 ENSGT00900000141083.c.b.d ##29 ENSGT00390000006095.c ENSGT00940000157522.c ENSGT00940000161398.e.b ENSGT00940000164578.a.a.b ENSGT00390000004360.a.a.a ENSGT00950000183115.a.a.a.a ENSGT01040000240444.A.b.b.e.a ENSGT01030000234571.b.b.a.a.a.a ENSGT00390000012058.c.a.c ENSGT00990000203615.b.a.b.e Rainbow trout MODERN SPECIES 16 serpine2 (ENSOMYG00000042953) wdfy1 (ENSOMYG00000042987) dhrs12la (ENSOMYG00000043025) ENSOMYG00000043148 ENSOMYG00000043153 acsl3a (ENSOMYG00000051839) MOGAT1 (ENSOMYG00000043158) farsb (ENSOMYG00000043179) SGPP2 (ENSOMYG00000043206) ENSOMYG00000043211 pax3b (ENSOMYG00000043216) EPHA4 (ENSOMYG00000043230) ENSOMYG00000068412 ENSOMYG00000055905 ENSOMYG00000043266 ##23 ENSOMYG00000043294 ##22 ENSOMYG00000043246 ENSOMYG00000043305 ##25 rbp2a (ENSOMYG00000043708) ##28 COPB2 (ENSOMYG00000062074) ##29 MRPS22 (ENSOMYG00000043703) PIK3CB (ENSOMYG00000043608) ENSOMYG00000043546 ENSOMYG00000043536 ENSOMYG00000043529 gpr55a (ENSOMYG00000043522) ENSOMYG00000043509 efhd1 (ENSOMYG00000043478) kcnj13 (ENSOMYG00000043477) ENSOMYG00000064329 ENSOMYG00000071106 Oncorhynchus_a ANCESTRAL SPECIES 78 ENSGT00940000154648.a.b.b ENSGT00940000153386.B.j ENSGT00940000158424.d ENSGT00940000165979.b ENSGT00940000157731.f.b ENSGT00390000010895.a.b ENSGT00390000013776.c ENSGT00940000155954.b.b.b ENSGT01030000234582.e.a.wc.a ENSGT00530000063489.a.d ENSGT00940000159500.i ENSGT00940000166595.b.c ENSGT00940000156504.i.a.e ENSGT00940000156948.j.a.a ENSGT00390000016324.m.b ENSGT00940000154369.g.b.b ##22 ENSGT01030000234629.C.b.b ##23 ENSGT00530000064220.b ENSGT00950000183086.a.a.b.h.a.b.b ##25 ENSGT00940000160165.a.d ##28 ENSGT00900000141083.c.b.d ##29 ENSGT00390000006095.c ENSGT00940000157522.c ENSGT00940000161398.e.b ENSGT00940000164578.a.a.b ENSGT00390000004360.a.a.a ENSGT00950000183115.a.a.a.a ENSGT01040000240444.A.b.b.e.a ENSGT01030000234571.b.b.a.a.a.a ENSGT00390000012058.c.a.c ENSGT00990000203615.b.a.b.e Coho salmon MODERN SPECIES 9 PSMD2 (ENSOKIG00005024834) SERPINE2 (ENSOKIG00005024649) dhrs12la (ENSOKIG00005024421) wdfy1 (ENSOKIG00005024308) SCG2 (ENSOKIG00005024280) ENSOKIG00005024276 kcne4 (ENSOKIG00005024271) acsl3a (ENSOKIG00005023041) MOGAT1 (ENSOKIG00005022988) farsb (ENSOKIG00005022847) SGPP2 (ENSOKIG00005022801) ENSOKIG00005022784 pax3b (ENSOKIG00005022662) EPHA4 (ENSOKIG00005021217) pxylp1 (ENSOKIG00005021145) SLC25A36 (ENSOKIG00005021117) ##22 SPSB4 (ENSOKIG00005021110) ##23 ENSOKIG00005021104 CLSTN2 (ENSOKIG00005020906) ##25 rbp2a (ENSOKIG00005020847) ##28 COPB2 (ENSOKIG00005020802) ##29 mrps22 (ENSOKIG00005020794) PIK3CB (ENSOKIG00005019301) HES6 (ENSOKIG00005019217) ENSOKIG00005019210 ENSOKIG00005019198 ITM2C (ENSOKIG00005019191) gpr55a (ENSOKIG00005019189) ENSOKIG00005019083 efhd1 (ENSOKIG00005019062) kcnj13 (ENSOKIG00005019057) Chinook salmon MODERN SPECIES 5 COPB2 (ENSOTSG00005005339) ##29 mrps22 (ENSOTSG00005005336) PIK3CB (ENSOTSG00005005287) ENSOTSG00005005274 her8.2 (ENSOTSG00005005273) ENSOTSG00005005271 ITM2C (ENSOTSG00005005269) gpr55a (ENSOTSG00005005266) ENSOTSG00005004687 efhd1 (ENSOTSG00005004680) kcnj13 (ENSOTSG00005004678) GAL3ST2 (ENSOTSG00005004675) hnrnpr (ENSOTSG00005004663) SMCO4 (ENSOTSG00005004661) ENSOTSG00005004660 SLC25A36 (ENSOTSG00005004658) ##22 spsb4a (ENSOTSG00005004657) ##23 ENSOTSG00005004656 ENSOTSG00005004655 ##25 EPHA4 (ENSOTSG00005004652) pax3b (ENSOTSG00005004639) ENSOTSG00005004637 ENSOTSG00005004636 ENSOTSG00005004635 SGPP2 (ENSOTSG00005004634) farsb (ENSOTSG00005004507) MOGAT1 (ENSOTSG00005004499) ENSOTSG00005004498 SCG2 (ENSOTSG00005004497) dhrs12la (ENSOTSG00005004480) wdfy1 (ENSOTSG00005004479) Salmo ANCESTRAL SPECIES 18 ENSGT00940000153386.B.j ENSGT00940000158424.d ENSGT00940000157731.e.b ENSGT00940000165979.b.a ENSGT00970000193372.b.a.b.b ENSGT00390000010895.a.b ENSGT00390000013776.c ENSGT00940000155954.b.b.a.a ENSGT01030000234582.e.a.wc.a ENSGT00530000063489.a.d ENSGT00940000159500.i ENSGT00940000166595.b.c ENSGT00940000156504.i.a.e ENSGT00940000156948.j.a.a ENSGT00390000016324.m.b ENSGT00940000154369.g.b.b ##22 ENSGT01030000234629.C.b.b ##23 ENSGT00530000064220.b ENSGT00950000183086.a.a.b.h.a.b.b ##25 ENSGT00940000160165.a.d ##28 ENSGT00390000006095.c ENSGT00940000162075.db.b.b ENSGT00940000157522.c ENSGT00940000161398.e.b ENSGT00940000164578.a.a.b ENSGT00390000004360.a.a.a ENSGT00950000183115.a.a.a.a ENSGT00950000183136.b.b.i.a ENSGT01040000240444.A.b.b.e.a ENSGT01030000234571.b.b.a.a.a.a ENSGT00390000012058.c.a.c River trout MODERN SPECIES 4 PSMD2 (ENSSTUG00000003015) serpine2 (ENSSTUG00000004095) wdfy1 (ENSSTUG00000004442) dhrs12la (ENSSTUG00000004618) SCG2 (ENSSTUG00000004694) kcne4 (ENSSTUG00000004697) acsl3a (ENSSTUG00000004701) MOGAT1 (ENSSTUG00000004706) farsb (ENSSTUG00000004736) SGPP2 (ENSSTUG00000004993) ENSSTUG00000005010 pax3b (ENSSTUG00000005031) ENSSTUG00000005147 EPHA4 (ENSSTUG00000005206) pxylp1 (ENSSTUG00000006679) SLC25A36 (ENSSTUG00000006696) ##22 spsb4a (ENSSTUG00000006771) ##23 ENSSTUG00000006772 CLSTN2 (ENSSTUG00000006813) ##25 rbp2a (ENSSTUG00000007216) ##28 mrps22 (ENSSTUG00000007231) ENSSTUG00000007276 ENSSTUG00000008129 HES6 (ENSSTUG00000008183) her8.2 (ENSSTUG00000008190) ENSSTUG00000008198 ITM2C (ENSSTUG00000008227) lpar5b (ENSSTUG00000008234) gpr55a (ENSSTUG00000008236) ENSSTUG00000008240 efhd1 (ENSSTUG00000008303) Atlantic salmon MODERN SPECIES 28 serpine2 (ENSSSAG00000046301) wdfy1 (ENSSSAG00000056785) dhrs12la (ENSSSAG00000057066) AP1S3 (ENSSSAG00000112646) ENSSSAG00000101506 kcne4 (ENSSSAG00000056752) acsl3a (ENSSSAG00000068061) mogt1 (ENSSSAG00000057167) farsb (ENSSSAG00000057206) SGPP2 (ENSSSAG00000057757) ENSSSAG00000103189 ENSSSAG00000120692 pax3b (ENSSSAG00000057843) EPHA4 (ENSSSAG00000092983) pxylp1 (ENSSSAG00000057141) ENSSSAG00000101149 ##22 SPSB4 (ENSSSAG00000057105) ##23 ENSSSAG00000057097 CLSTN2 (ENSSSAG00000057150) ##25 ENSSSAG00000046286 ##28 mrps22 (ENSSSAG00000046262) ENSSSAG00000082803 ENSSSAG00000061272 HES6 (ENSSSAG00000061216) ENSSSAG00000088398 ENSSSAG00000061151 ITM2C (ENSSSAG00000061118) gpr55a (ENSSSAG00000120052) ENSSSAG00000060567 efhd1 (ENSSSAG00000060520) kcnj13 (ENSSSAG00000060505) Northern pike MODERN SPECIES ENSELUG00000015157 psmd2 (ENSELUG00000015058) prss16 (ENSELUG00000015027) serpine2 (ENSELUG00000015004) wdfy1 (ENSELUG00000014992) dhrs12la (ENSELUG00000014951) ENSELUG00000014895 kcne4 (ENSELUG00000014891) acsl3a (ENSELUG00000014878) farsb (ENSELUG00000014767) SGPP2 (ENSELUG00000014716) ENSELUG00000014710 pax3b (ENSELUG00000014699) EPHA4 (ENSELUG00000014650) pxylp1 (ENSELUG00000000536) SLC25A36 (ENSELUG00000014542) ##22 spsb4a (ENSELUG00000014517) ##23 ENSELUG00000033315 CLSTN2 (ENSELUG00000000534) ##25 rbp2a (ENSELUG00000000526) ##28 COPB2 (ENSELUG00000014429) ##29 mrps22 (ENSELUG00000014349) PIK3CB (ENSELUG00000014140) PER2 (ENSELUG00000014096) her13 (ENSELUG00000014037) her8.2 (ENSELUG00000014014) ENSELUG00000014008 ITM2C (ENSELUG00000013990) lpar5b (ENSELUG00000013976) gpr55a (ENSELUG00000013972) NGEF (ENSELUG00000013959) Otomorpha ANCESTRAL SPECIES 480 ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.i.a ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.c #23 ENSGT00950000183086.a.a.b.h.a ##25 Otophysi ANCESTRAL SPECIES 351 ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.i.a ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.e.a ENSGT01030000234629.C.c #23 ENSGT00950000183086.a.a.b.h.a ##25 Characiphysae ANCESTRAL SPECIES 77 ENSGT00940000164640 ENSGT00390000012596.e ENSGT00940000157704.a.a ENSGT00940000175356 ENSGT00940000157718.c ENSGT00940000156181.B ENSGT00940000158610.d ENSGT01050000244924.a.b.h ENSGT00390000000954 ENSGT00390000004175.b ENSGT01010000222313.A.b.a.d.g.a ENSGT00940000154539.a.a.e ENSGT01100000263547.a.b.b.b.a.a ENSGT00940000156948.i.a ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.e.a ENSGT01030000234629.C.c #23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00530000063252.b ENSGT00940000155418.a.b.b ENSGT00940000160603 ENSGT00940000159510 ENSGT00940000180166 Characiphysae_b DUPLICATION Characiphysae_b ANCESTRAL SPECIES 63 ENSGT00940000164640 ENSGT00390000012596.e ENSGT00940000157704.a.a ENSGT00940000175356 ENSGT00940000157718.c ENSGT00940000156181.B ENSGT00940000158610.d ENSGT01050000244924.a.b.h ENSGT00390000000954 ENSGT00390000004175.b ENSGT01010000222313.A.b.a.d.g.a ENSGT00940000154539.a.a.e ENSGT01100000263547.a.b.b.b.a.a ENSGT00940000156948.i.a ENSGT00390000016324 ENSGT00940000154369.g.b.c ##22 ENSGT01030000234629.C.c #23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183155.a.b.a.a.a ENSGT00530000063252.b ENSGT00940000155418.a.b.b ENSGT00940000160603 ENSGT00940000159510 Characoidei ANCESTRAL SPECIES 257 ENSGT01050000244924.a.b.h ENSGT00390000000954 ENSGT00390000004175.b ENSGT01010000222313.A.b.a.d.g.a ENSGT00940000154539.a.a.e ENSGT01100000263547.a.b.b.b.a.a ENSGT00940000156948.i.a ENSGT00390000016324 ENSGT00940000154369.g.b.c ##22 ENSGT01030000234629.C.c #23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00950000183155.a.b.a.a.a ENSGT00530000063252.b ENSGT00940000155418.a.b.b ENSGT00940000160603 ENSGT00940000159510 Mexicana tetra MODERN SPECIES ENSAMXG00000006345 #10 rab3aa (ENSAMXG00000043573) ##11 AGTR1 (ENSAMXG00000025929) gyg1a (ENSAMXG00000036673) HLTF (ENSAMXG00000006359) ENSAMXG00000036626 pccb (ENSAMXG00000006365) msl2a (ENSAMXG00000032232) nceh1a (ENSAMXG00000038667) PPP2R3A (ENSAMXG00000006377) si:dkey-10f21.4 (ENSAMXG00000033409) cnn3b (ENSAMXG00000038181) ENSAMXG00000006396 EPHA4 (ENSAMXG00000006406) pxylp1 (ENSAMXG00000038336) SLC25A36 (ENSAMXG00000033723) ##22 spsb4b (ENSAMXG00000010781) #23 CLSTN2 (ENSAMXG00000010806) ##25 ENSAMXG00000039784 fndc3ba (ENSAMXG00000006332) ENSAMXG00000029621 pld1a (ENSAMXG00000006319) tnika (ENSAMXG00000006314) slc2a2 (ENSAMXG00000006312) eif5a2 (ENSAMXG00000043662) slc7a14a (ENSAMXG00000006310) cldn11a (ENSAMXG00000040638) GRIN3B (ENSAMXG00000006305) ENSAMXG00000030466 ENSAMXG00000038294 plppr3a (ENSAMXG00000043542) Red-bellied piranha MODERN SPECIES 354 SLC25A36 (ENSPNAG00000027426) ##22 spsb4b (ENSPNAG00000027380) #23 CLSTN2 (ENSPNAG00000027368) ##25 ENSPNAG00000027284 FCGBP (ENSPNAG00000007016) ENSPNAG00000026893 ENSPNAG00000026851 ENSPNAG00000026842 kirrel3l (ENSPNAG00000005512) Electric eel MODERN SPECIES 19 ENSEEEG00000018699 agla (ENSEEEG00000018672) FRRS1 (ENSEEEG00000018668) ENSEEEG00000018667 PLPPR4 (ENSEEEG00000018666) plppr5a (ENSEEEG00000018665) ptbp2b (ENSEEEG00000017730) RWDD3 (ENSEEEG00000017675) hccsa.1 (ENSEEEG00000017674) ENSEEEG00000017672 si:dkey-10f21.4 (ENSEEEG00000017670) cnn3b (ENSEEEG00000017666) ENSEEEG00000017663 EPHA4 (ENSEEEG00000017658) pxylp1 (ENSEEEG00000017644) SLC25A36 (ENSEEEG00000017640) ##22 spsb4b (ENSEEEG00000017639) #23 ENSEEEG00000017625 ##25 ENSEEEG00000017623 ENSEEEG00000017622 ENSEEEG00000017620 APLP1 (ENSEEEG00000017609) ST14 (ENSEEEG00000017594) kirrel3l (ENSEEEG00000017586) nphs1 (ENSEEEG00000017583) ENSEEEG00000017577 ENSEEEG00000017574 ENSEEEG00000017572 ENSEEEG00000017570 ENSEEEG00000017568 Characiphysae_b ANCESTRAL SPECIES 33 ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00990000209937 ENSGT00990000208442 ENSGT00940000173713 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT00940000154369.g.b.d ##22 ENSGT01030000234629.C.d #23 ENSGT00950000183116.b.a.a.a.b ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675.c #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT01030000234576.D.a.a.a ENSGT00940000160062.a ENSGT00940000157990.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163496.a.i.a ENSGT00940000159567.a.a ENSGT00940000163520.A.a.a.a.b.a ENSGT00940000157841 Electric eel MODERN SPECIES 935 SLC25A36 (ENSEEEG00000005340) ##22 spsb4a (ENSEEEG00000005338) #23 Channel catfish MODERN SPECIES 8 ENSIPUG00000019233 smco4 (ENSIPUG00000019226) agla (ENSIPUG00000019133) ENSIPUG00000019125 PALMD (ENSIPUG00000019112) PLPPR4 (ENSIPUG00000019080) plppr5a (ENSIPUG00000019064) ENSIPUG00000019046 ptbp2b (ENSIPUG00000019002) rwdd3 (ENSIPUG00000018984) hccsa.1 (ENSIPUG00000018962) si:dkey-10f21.4 (ENSIPUG00000018940) cnn3b (ENSIPUG00000018922) ENSIPUG00000018904 pxylp1 (ENSIPUG00000018814) SLC25A36 (ENSIPUG00000018795) ##22 ENSIPUG00000018782 spsb4b (ENSIPUG00000018765) #23 CLSTN2 (ENSIPUG00000018732) ##25 aplp1 (ENSIPUG00000018710) ST14 (ENSIPUG00000018652) Kirrel (ENSIPUG00000018590) ENSIPUG00000018575 nphs1 (ENSIPUG00000018528) ENSIPUG00000018518 zbtb32 (ENSIPUG00000018508) or71at1 (ENSIPUG00000018502) or71al2 (ENSIPUG00000018490) zp2l1 (ENSIPUG00000018481) ENSIPUG00000018477 ENSIPUG00000018472 Cyprinoidei ANCESTRAL SPECIES 129 ENSGT00940000156253.a.b ENSGT00940000159077.j ENSGT00940000159077.i ENSGT00940000164824.B.a ENSGT00940000164824.A ENSGT00940000156294.c.b ENSGT00530000063946.a.b ENSGT00530000063489.a ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.i.a ENSGT01100000263547.a.b.b.b.b.a.b.b.a ENSGT01100000263547.a.b.b.b.b.a.b.b.b ENSGT00390000016324 ENSGT00940000154369.g.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.e.a ENSGT00940000154308.D.c.b.b.b.a.b.b.b ENSGT01030000234629.C.c #23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT01100000263547.a.b.b.b.b.a.b.a.a.b.a.a.a.b ENSGT00940000156013 ENSGT00390000005285 ENSGT00940000169425 ENSGT00940000160117.k.b ENSGT00940000166267.b.b.a ENSGT00940000160117.l ENSGT00940000166267.b.b.b ENSGT00940000154981.bb.a ENSGT00950000182923.B.a ENSGT00990000203615.b.a.b Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 189 ENSGT00940000158344.a.a.b ENSGT01100000263547.a.b.b.b.b.a.b.a.a.b.a.a.b.b.b.a ENSGT00940000156253.a.b.c.a ENSGT00940000159077.j ENSGT00940000159077.i.a.a ENSGT00940000164824.B.a.a ENSGT00940000164824.A ENSGT00940000156294.c.b.f ENSGT00530000063946.a.b.b ENSGT00530000063489.a.a ENSGT00940000159500 ENSGT00940000166595.b.b ENSGT00940000156504.i.a.g.b ENSGT00940000156948.i.a.a ENSGT00390000016324.l ENSGT00940000154369.g.b.e.a ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.e.a ENSGT01030000234629.C.c.b #23 ENSGT00950000183086.a.a.b.h.a.d ##25 ENSGT01100000263547.a.b.b.b.b.a.b.a.a.b.a.a.a.a.a.a.b ENSGT00940000156013.l ENSGT00390000005285 ENSGT00940000169425.b ENSGT00940000160117.l ENSGT00940000166267.b.b.b.b ENSGT00940000154981.bb.a.q ENSGT00950000182923.B.a.i ENSGT00990000203615.b.a.b.g ENSGT00390000012058.c.a.a Cyprininae_a ANCESTRAL SPECIES 38 ENSGT00940000159077.j ENSGT00940000159077.i.a.a ENSGT00940000164824.B.a.a ENSGT00940000156294.c.b.f ENSGT00530000063946.a.b.b ENSGT00530000063489.a.b ENSGT00940000166595.b.a ENSGT00940000156504.i.a.h ENSGT00530000063489.a.a ENSGT00940000159500 ENSGT00940000166595.b.b ENSGT00940000156504.i.a.g.b ENSGT01080000257462.a.b.a.b.b.b ENSGT00940000156948.i.a.a ENSGT00390000016324.l ENSGT00940000154369.g.b.e.a ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.e.a ENSGT01030000234629.C.c.b #23 ENSGT00950000183086.a.a.b.h.a.d ##25 ENSGT01100000263547.a.b.b.b.b.a.b.a.a.b.a.a.a.a.a.a.b ENSGT00940000156013.l ENSGT00390000005285 ENSGT00940000169425.a ENSGT00940000160117.k.b ENSGT00940000166267.b.b.b.a ENSGT00940000154981.bb.a.r ENSGT00950000182923.B.a.j ENSGT00990000203615.b.a.b.h ENSGT00390000012058.c.a.b ENSGT01030000234571.b.b.a.a.a.e ENSGT01040000240444.A.b.b.h Common carp reference MODERN SPECIES 26 GRIK1 (ENSCCRG00000018827) cldn8.3 (ENSCCRG00000059355) CLDN8 (ENSCCRG00000025005) cldn8.2 (ENSCCRG00000076559) TIAM1 (ENSCCRG00000023012) scaf4b (ENSCCRG00000032084) farsb (ENSCCRG00000027027) SGPP2 (ENSCCRG00000077548) ENSCCRG00000056137 pax3b (ENSCCRG00000027071) ENSCCRG00000079537 ENSCCRG00000036826 EPHA4 (ENSCCRG00000026981) ENSCCRG00000065828 pxylp1 (ENSCCRG00000070709) ENSCCRG00000074832 ##22 ENSCCRG00000022567 ENSCCRG00000022580 spsb4b (ENSCCRG00000022582) #23 ENSCCRG00000055486 ##25 ENSCCRG00000081656 ENSCCRG00000053636 ENSCCRG00000080057 usp16 (ENSCCRG00000024055) usp16 (ENSCCRG00000024052) ENSCCRG00000069762 ENSCCRG00000027122 fat3a (ENSCCRG00000018989) ENSCCRG00000078408 kcnj13 (ENSCCRG00000063062) efhd1 (ENSCCRG00000042422) Goldfish MODERN SPECIES 6 cldn8.3 (ENSCARG00000007720) CLDN8 (ENSCARG00000007725) cldn8.2 (ENSCARG00000007742) ENSCARG00000007749 TIAM1 (ENSCARG00000007774) scaf4b (ENSCARG00000007928) farsb (ENSCARG00000007948) ENSCARG00000008019 pax3b (ENSCARG00000008023) ENSCARG00000008029 ENSCARG00000008035 ENSCARG00000008039 EPHA4 (ENSCARG00000008070) ENSCARG00000008636 pxylp1 (ENSCARG00000008647) SLC25A36 (ENSCARG00000008668) ##22 ENSCARG00000008693 ftr72 (ENSCARG00000008685) ENSCARG00000008698 ENSCARG00000008700 spsb4b (ENSCARG00000008708) #23 CLSTN2 (ENSCARG00000008713) ##25 ENSCARG00000008725 ENSCARG00000008761 efhd1 (ENSCARG00000009024) kcnj13 (ENSCARG00000009029) GAL3ST2 (ENSCARG00000009035) robo2 (ENSCARG00000009107) ENSCARG00000010820 ROBO1 (ENSCARG00000010981) ENSCARG00000015097 Cyprininae ANCESTRAL SPECIES 856 ENSGT00940000156504.i.a.g.a ENSGT01080000257462.a.a.a.b.b ENSGT00940000156948.i.a.b ENSGT01100000263547.a.b.b.b.b.a.b.b.a.a.a ENSGT01100000263547.a.b.b.b.b.a.b.b.b ENSGT00390000016324.k ENSGT00940000154369.g.b.e.b ##22 Goldfish DUPLICATION Goldfish MODERN SPECIES 4 ENSCARG00000017564 TIAM1 (ENSCARG00000017412) scaf4b (ENSCARG00000017368) farsb (ENSCARG00000017236) SGPP2 (ENSCARG00000017193) ENSCARG00000017184 pax3b (ENSCARG00000017178) pax3b (ENSCARG00000017170) ENSCARG00000017162 ENSCARG00000017155 EPHA4 (ENSCARG00000016541) ENSCARG00000016487 ENSCARG00000016463 ENSCARG00000016455 pxylp1 (ENSCARG00000016445) SLC25A36 (ENSCARG00000016421) ##22 ENSCARG00000016398 ENSCARG00000016385 spsb4b (ENSCARG00000016379) #23 CLSTN2 (ENSCARG00000016313) ##25 ENSCARG00000016306 ENSCARG00000016299 ENSCARG00000016295 ENSCARG00000016289 ENSCARG00000016285 dnaaf9 (ENSCARG00000016094) cfd (ENSCARG00000016075) foxi2 (ENSCARG00000016066) fgfr3 (ENSCARG00000013122) ENSCARG00000012970 letm1 (ENSCARG00000011981) Goldfish MODERN SPECIES 34 GRIK1 (ENSCARG00000035281) CLDN8 (ENSCARG00000035263) cldn8.2 (ENSCARG00000035259) ENSCARG00000035257 TIAM1 (ENSCARG00000035143) scaf4b (ENSCARG00000035110) farsb (ENSCARG00000034953) SGPP2 (ENSCARG00000034923) ENSCARG00000034916 pax3b (ENSCARG00000034899) ENSCARG00000034883 EPHA4 (ENSCARG00000034428) ENSCARG00000034369 ENSCARG00000034324 pxylp1 (ENSCARG00000034293) SLC25A36 (ENSCARG00000034257) ##22 ENSCARG00000034212 ENSCARG00000034196 ENSCARG00000034180 ENSCARG00000034169 ENSCARG00000034115 ENSCARG00000034050 wsb1 (ENSCARG00000034018) ENSCARG00000034003 cuedc1b (ENSCARG00000033982) vezf1b (ENSCARG00000033960) ENSCARG00000032192 OMG (ENSCARG00000032138) ENSCARG00000032129 NF1 (ENSCARG00000031607) akap1b (ENSCARG00000031328) Cyprininae_a ANCESTRAL SPECIES 585 ENSGT00940000156504.i.a.g.a ENSGT01080000257462.a.a.a.b.b ENSGT00940000156948.i.a.b ENSGT01100000263547.a.b.b.b.b.a.b.b.a.a.a ENSGT01100000263547.a.b.b.b.b.a.b.b.b ENSGT00390000016324.k ENSGT00940000154369.g.b.e.b ##22 ENSGT00940000154308.D.c.b.b.b.a.b.b.b ENSGT01030000234629.C.c.a #23 ENSGT00950000183086.a.a.b.h.a.c ##25 Common carp reference MODERN SPECIES 39 ENSCCRG00000074529 ENSCCRG00000024558 cldn8.2 (ENSCCRG00000063127) TIAM1 (ENSCCRG00000001831) scaf4b (ENSCCRG00000027095) farsb (ENSCCRG00000027083) ENSCCRG00000027080 SGPP2 (ENSCCRG00000054393) pax3b (ENSCCRG00000071060) ENSCCRG00000027000 ENSCCRG00000070321 ENSCCRG00000056242 EPHA4 (ENSCCRG00000019015) ENSCCRG00000072090 pxylp1 (ENSCCRG00000078562) ENSCCRG00000028342 ##22 ENSCCRG00000071838 ENSCCRG00000028351 ENSCCRG00000011030 ENSCCRG00000011026 #23 ENSCCRG00000075956 ##25 ENSCCRG00000064253 ENSCCRG00000082540 ENSCCRG00000066272 ENSCCRG00000080261 usp16 (ENSCCRG00000029085) ENSCCRG00000029090 ENSCCRG00000067250 fat3a (ENSCCRG00000063995) ENSCCRG00000082279 kcnj13 (ENSCCRG00000076232) Cyprininae ANCESTRAL SPECIES ENSGT00940000154369.g.b.f ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000154369.g.b.f ##22 Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 73 GRIK1 (ENSSGRG00000008992) cldn8.3 (ENSSGRG00000008987) cldn8.2 (ENSSGRG00000008985) TIAM1 (ENSSGRG00000008434) scaf4b (ENSSGRG00000008411) farsb (ENSSGRG00000007425) SGPP2 (ENSSGRG00000007349) ENSSGRG00000007347 pax3b (ENSSGRG00000007345) ENSSGRG00000007343 ENSSGRG00000007340 ENSSGRG00000007336 ENSSGRG00000007334 EPHA4 (ENSSGRG00000006736) pxylp1 (ENSSGRG00000006720) SLC25A36 (ENSSGRG00000006703) ##22 ENSSGRG00000006700 ENSSGRG00000006699 spsb4b (ENSSGRG00000006694) #23 CLSTN2 (ENSSGRG00000006350) ##25 usp16 (ENSSGRG00000006314) ENSSGRG00000006306 ENSSGRG00000006302 ENSSGRG00000006298 fat3a (ENSSGRG00000005012) ENSSGRG00000004978 ENSSGRG00000004977 GAL3ST2 (ENSSGRG00000004973) GAL3ST2 (ENSSGRG00000004971) kcnj13 (ENSSGRG00000004969) efhd1 (ENSSGRG00000004966) Golden-line barbel MODERN SPECIES 659 ENSSGRG00000026318 ENSSGRG00000026316 cldn8.2 (ENSSGRG00000026315) TIAM1 (ENSSGRG00000026313) scaf4b (ENSSGRG00000026311) farsb (ENSSGRG00000026019) SGPP2 (ENSSGRG00000026004) ENSSGRG00000026003 pax3b (ENSSGRG00000026002) ENSSGRG00000026001 ENSSGRG00000025999 ENSSGRG00000025998 ENSSGRG00000025997 EPHA4 (ENSSGRG00000024704) pxylp1 (ENSSGRG00000024678) SLC25A36 (ENSSGRG00000024676) ##22 ENSSGRG00000024674 ENSSGRG00000024673 ENSSGRG00000024671 ENSSGRG00000024670 CLSTN2 (ENSSGRG00000024668) ##25 Zebrafish MODERN SPECIES 6 ENSDARG00000088274 GRIK1 (ENSDARG00000040627) cldn8.2 (ENSDARG00000040628) cldn8.3 (ENSDARG00000099950) TIAM1 (ENSDARG00000025920) scaf4b (ENSDARG00000018854) farsb (ENSDARG00000016864) SGPP2 (ENSDARG00000079608) pax3b (ENSDARG00000028348) ENSDARG00000097725 EPHA4 (ENSDARG00000010767) ENSDARG00000095665 ENSDARG00000077673 ENSDARG00000096545 pxylp1 (ENSDARG00000040644) SLC25A36 (ENSDARG00000015915) ##22 ENSDARG00000098004 ftr72 (ENSDARG00000026704) ENSDARG00000095298 ENSDARG00000097679 ENSDARG00000076093 ENSDARG00000097373 ENSDARG00000040536 ENSDARG00000053800 spsb4b (ENSDARG00000040538) #23 CLSTN2 (ENSDARG00000060638) ##25 ENSDARG00000093532 ENSDARG00000094350 ENSDARG00000078101 ENSDARG00000076819 ENSDARG00000095528 Osteoglossiformes ANCESTRAL SPECIES 61 ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979.e ENSGT00970000193372.b.a.b ENSGT00390000010895.d ENSGT00390000013776 ENSGT00940000155954.a.l ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504 ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.a #22 ENSGT01030000234629.C.f #23 ENSGT00940000154369.g.b ##22 ENSGT01030000234629.C.e #23 ENSGT00950000183086.a.a.b.h.a ##25 ENSGT00940000160165.a ##28 ENSGT00900000141083.c.a #29 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.f ENSGT00940000164578.a.a ENSGT00390000004360.a.b.b ENSGT00950000183115.a ENSGT01040000240444.A.b.b ENSGT01040000240444.A.b.a.a ENSGT01030000234571.b.b.a.a.a ENSGT00940000156108.c ENSGT00990000203615.b.a.b P. kingsleyae MODERN SPECIES 168 mterf4 (ENSPKIG00000014785) ENSPKIG00000014802 KLHL6 (ENSPKIG00000014846) PAK2 (ENSPKIG00000014902) ing5b (ENSPKIG00000015034) d2hgdh (ENSPKIG00000015069) acvr1l (ENSPKIG00000015113) otomp (ENSPKIG00000015159) HS6ST1 (ENSPKIG00000015216) uggt1 (ENSPKIG00000015319) ek1 (ENSPKIG00000015583) ENSPKIG00000015614 ENSPKIG00000015635 ENSPKIG00000015662 EPHA4 (ENSPKIG00000015684) ENSPKIG00000015745 ##22 spsb4a (ENSPKIG00000015796) #23 CFAP57 (ENSPKIG00000015827) ENSPKIG00000015853 ANGPTL3 (ENSPKIG00000015888) ENSPKIG00000015961 LRP8 (ENSPKIG00000016024) ENSPKIG00000016072 ENSPKIG00000016085 FEM1A (ENSPKIG00000016096) sin3b (ENSPKIG00000016126) haus5 (ENSPKIG00000016198) fzr1a (ENSPKIG00000016265) ENSPKIG00000016343 ENSPKIG00000016358 mfsd12a (ENSPKIG00000016382) Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Ovalentaria ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Poeciliinae ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Poecilia ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Guppy DUPLICATION Guppy MODERN SPECIES 447 ENSPREG00000014589 ENSPREG00000014558 prg4a (ENSPREG00000014538) dusp12 (ENSPREG00000014521) OLFML2B (ENSPREG00000014496) ENSPREG00000014488 ENSPREG00000014481 kifap3b (ENSPREG00000014417) PDC (ENSPREG00000014388) ENSPREG00000014369 #17 CTXN1 (ENSPREG00000014346) #18 TIMM44 (ENSPREG00000014295) #19 rab11bb (ENSPREG00000014269) #20 MARCHF2 (ENSPREG00000014259) #21 ENSPREG00000014251 ##22 ENSPREG00000014238 ##22 spsb4a (ENSPREG00000014221) #23 clstn2a (ENSPREG00000014196) #25 NMNAT3 (ENSPREG00000014156) #26 rbp1.1 (ENSPREG00000014144) #27 copb2 (ENSPREG00000014106) #29 ENSPREG00000014095 #30 dvl3a (ENSPREG00000014078) #30 ap2m1a (ENSPREG00000014057) #31 pcyt1aa (ENSPREG00000014022) #32 and3 (ENSPREG00000014008) #33 DYNC1I2 (ENSPREG00000013942) #34 slc25a12 (ENSPREG00000013884) #35 ENSPREG00000013866 metap1d (ENSPREG00000013845) #36 itga6b (ENSPREG00000013714) #37 Guppy MODERN SPECIES 447 odr4 (ENSPREG00000014667) ENSPREG00000014589 ENSPREG00000014558 prg4a (ENSPREG00000014538) dusp12 (ENSPREG00000014521) OLFML2B (ENSPREG00000014496) ENSPREG00000014488 ENSPREG00000014481 kifap3b (ENSPREG00000014417) PDC (ENSPREG00000014388) ENSPREG00000014369 #17 CTXN1 (ENSPREG00000014346) #18 TIMM44 (ENSPREG00000014295) #19 rab11bb (ENSPREG00000014269) #20 MARCHF2 (ENSPREG00000014259) #21 ENSPREG00000014251 ##22 ENSPREG00000014238 ##22 spsb4a (ENSPREG00000014221) #23 clstn2a (ENSPREG00000014196) #25 NMNAT3 (ENSPREG00000014156) #26 rbp1.1 (ENSPREG00000014144) #27 copb2 (ENSPREG00000014106) #29 ENSPREG00000014095 #30 dvl3a (ENSPREG00000014078) #30 ap2m1a (ENSPREG00000014057) #31 pcyt1aa (ENSPREG00000014022) #32 and3 (ENSPREG00000014008) #33 DYNC1I2 (ENSPREG00000013942) #34 slc25a12 (ENSPREG00000013884) #35 ENSPREG00000013866 metap1d (ENSPREG00000013845) #36 NAME_4 ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Sheepshead minnow MODERN SPECIES 870 ENSCVAG00000013718 ENSCVAG00000013707 pxylp1 (ENSCVAG00000013694) ENSCVAG00000013683 ##22 spsb4a (ENSCVAG00000013675) ##23 Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Turquoise killifish MODERN SPECIES 357 ZGC (ENSNFUG00015019539) USF1 (ENSNFUG00015019601) ENSNFUG00015019635 ENSNFUG00015019642 ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Salmoninae ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Chinook salmon MODERN SPECIES 2888 pik3r2 (ENSOTSG00005027388) #8 ifi30 (ENSOTSG00005027386) #9 mpv17l2 (ENSOTSG00005027385) ENSOTSG00005027382 #10 RAB3A (ENSOTSG00005027381) ##11 jund (ENSOTSG00005027380) #12 pgpep1 (ENSOTSG00005027379) #13 upf1 (ENSOTSG00005027257) #14 HOMER3 (ENSOTSG00005027255) #15 uba52 (ENSOTSG00005027254) #16 ENSOTSG00005027252 CTXN1 (ENSOTSG00005027251) #18 TIMM44 (ENSOTSG00005026371) #19 rab11bb (ENSOTSG00005026342) #20 MARCHF2 (ENSOTSG00005026341) #21 SLC25A36 (ENSOTSG00005026340) ##22 slc25a36a (ENSOTSG00005026339) #22 spsb4a (ENSOTSG00005026338) #23 ENSOTSG00005026337 clstn2a (ENSOTSG00005026336) #25 NMNAT3 (ENSOTSG00005026335) #26 rbp1.1 (ENSOTSG00005026334) #27 copb2 (ENSOTSG00005023103) #29 ENSOTSG00005023098 dvl3a (ENSOTSG00005023093) #30 ap2m1a (ENSOTSG00005023092) #31 pcyt1aa (ENSOTSG00005023090) #32 SERP1 (ENSOTSG00005023089) selenot1a (ENSOTSG00005023087) ENSOTSG00005023086 ENSOTSG00005023083 Otomorpha ANCESTRAL SPECIES 38 ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00980000200268 ENSGT01060000253400 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT00940000154369.h ##22 ENSGT01030000234629.C.d #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675.c #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 Otophysi ANCESTRAL SPECIES 3 ENSGT00940000156569.a.b.a ENSGT00940000165458 ENSGT00390000018047 ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c.c ENSGT00390000004600.b.a ENSGT00940000165265.g.a ENSGT00990000209937 ENSGT01060000253400 ENSGT01030000235105 ENSGT00940000156948.i.b ENSGT00940000154369.g.a #22 ENSGT00940000162556.D.b.a #24 ENSGT00940000154369.h ##22 ENSGT01030000234629.C.d #23 ENSGT00950000183086.a.a.b.h.b #25 ENSGT00950000183179.b.b #26 ENSGT00940000159675.c #27 ENSGT00940000160165.b #28 ENSGT00900000141083.c.a #29 ENSGT00940000160062.a ENSGT00980000198654 ENSGT00940000157990.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163496.a.i.a ENSGT00940000159567.a.a ENSGT00940000157841 ENSGT00940000162200.a.b ENSGT00390000001141 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Cyprininae ANCESTRAL SPECIES 71 ENSGT00940000173713.h.b.a ENSGT01030000235105.b.a ENSGT00940000156948.i.b.a ENSGT00940000154369.h ##22 ENSGT01030000234629.C.d.a #23 ENSGT00940000162556.D.b.a.b #24 ENSGT00950000183116.b.a.a.a.b.d ENSGT00950000183086.a.a.b.h.b.a #25 ENSGT00950000183179.b.b.f.a #26 ENSGT00940000159675.d.a #27 ENSGT00940000160165.b.a #28 ENSGT00900000141083.c.a.e #29 ENSGT00940000160062.a.b ENSGT00980000198654.b ENSGT00940000157990.a.a.a ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.b ENSGT00940000163496.a.i.b.a.a ENSGT00940000159567.a.a.f ENSGT00940000157841.c Cyprininae_a ANCESTRAL SPECIES ENSGT00940000154369.h ##22 Golden-line barbel MODERN SPECIES 49 epha4b (ENSSGRG00000005765) ENSSGRG00000005766 ENSSGRG00000005767 ENSSGRG00000005768 ENSSGRG00000005769 epha4a (ENSSGRG00000005777) SLC25A36 (ENSSGRG00000005873) ##22 spsb4a (ENSSGRG00000005875) #23 ENSSGRG00000005879 ENSSGRG00000005980 ENSSGRG00000005982 clstn2a (ENSSGRG00000006002) #25 NMNAT3 (ENSSGRG00000006155) #26 RBP1 (ENSSGRG00000006159) #27 rbp1.2 (ENSSGRG00000006162) #27 rbp2b (ENSSGRG00000006166) #28 copb2 (ENSSGRG00000006200) #29 ENSSGRG00000007680 rem2 (ENSSGRG00000007681) carmil3 (ENSSGRG00000007688) ehf (ENSSGRG00000007691) ric8a (ENSSGRG00000007694) Spotted gar MODERN SPECIES 652 FAM124B (ENSLOCG00000003983) prss16 (ENSLOCG00000003995) serpine2 (ENSLOCG00000004009) wdfy1 (ENSLOCG00000004030) dhrs12la (ENSLOCG00000004049) ap1s3a (ENSLOCG00000004062) scg2b (ENSLOCG00000004078) acsl3b (ENSLOCG00000004093) MOGAT1 (ENSLOCG00000004115) farsb (ENSLOCG00000004136) SGPP2 (ENSLOCG00000004157) ENSLOCG00000017388 pax3b (ENSLOCG00000004189) epha4a (ENSLOCG00000004201) pxylp1 (ENSLOCG00000004225) slc25a36a (ENSLOCG00000004239) #22 ENSLOCG00000004257 ##23 ENSLOCG00000004271 clstn2a (ENSLOCG00000004289) #25 rbp1.1 (ENSLOCG00000004318) #27 rbp2a (ENSLOCG00000004353) #28 copb2 (ENSLOCG00000004368) ##29 mrps22 (ENSLOCG00000004403) foxl2b (ENSLOCG00000017389) PIK3CB (ENSLOCG00000004421) per2 (ENSLOCG00000004441) hes6 (ENSLOCG00000004463) her8.2 (ENSLOCG00000004481) CAB39 (ENSLOCG00000004495) itm2ca (ENSLOCG00000004510) lpar5a (ENSLOCG00000004527)