Laurasiatheria	ANCESTRAL SPECIES	15				ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00960000189525	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Laurasiatheria_a	ANCESTRAL SPECIES	19				ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00960000189525	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Laurasiatheria_b	ANCESTRAL SPECIES	18				ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00960000189525	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Carnivora	ANCESTRAL SPECIES	6	ENSGT00940000156463 #8	ENSGT00390000001296 #9	ENSGT00940000153104.e.a.a.b #10	ENSGT00940000163095.b #11	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00960000189525	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Caniformia	ANCESTRAL SPECIES	4	ENSGT00940000156463 #8	ENSGT00390000001296 #9	ENSGT00940000153104.e.a.a.b #10	ENSGT00940000163095.b #11	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00960000189525	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00390000012690 #7	ENSGT00940000156463 #8	ENSGT00390000001296 #9	ENSGT00940000153104.e.a.a.b #10	ENSGT00940000163095.b #11	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Mustelinae	ANCESTRAL SPECIES	10	ENSGT00390000012690 #7	ENSGT00940000156463 #8	ENSGT00390000001296 #9	ENSGT00940000153104.e.a.a.b #10	ENSGT00940000163095.b #11	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
American mink	MODERN SPECIES	58	ENSNVIG00000021055	KIF15 (ENSNVIG00000021010) #8	K1143 (ENSNVIG00000020998) #9	ZNF501 (ENSNVIG00000020994) #10	ZNF502 (ENSNVIG00000020983) #11	ATP13A1 (ENSNVIG00000020944) #12	GMIP (ENSNVIG00000020899) #13	LPAR2 (ENSNVIG00000020878) #14	PBX4 (ENSNVIG00000020863) #15	CILP2 (ENSNVIG00000020847) #16	YJEFN3 (ENSNVIG00000020838) #17	NDUFA13 (ENSNVIG00000020832) #18	TSSK6 (ENSNVIG00000020829) #19	GATAD2A (ENSNVIG00000020782) #20	MAU2 (ENSNVIG00000020762) #21	SUGP1 (ENSNVIG00000020747) #22	TM6SF2 (ENSNVIG00000020733) #23	HAPLN4 (ENSNVIG00000020713) #24	NCAN (ENSNVIG00000020377) #25	NR2CA (ENSNVIG00000020303) #26	RFXANK (ENSNVIG00000020264) #27	BORCS8 (ENSNVIG00000020221) #28	MEF2B (ENSNVIG00000020206) #29	TMEM161A (ENSNVIG00000020180) #30	S2542 (ENSNVIG00000020166) #31	ARMC6 (ENSNVIG00000020143) #32	SUGP2 (ENSNVIG00000020116) #33	HOMER3 (ENSNVIG00000020032) #34	DDX49 (ENSNVIG00000020003) #35	COPE (ENSNVIG00000019958) #36	CERS1 (ENSNVIG00000019939) #37
Ferret	MODERN SPECIES	238	EXOSC7 (ENSMPUG00000015336)	ZDHHC3 (ENSMPUG00000015337)	TMEM42 (ENSMPUG00000015339) #7	KIF15 (ENSMPUG00000015344) #8	KIAA1143 (ENSMPUG00000015348) #9	ZNF502 (ENSMPUG00000015349) #11	ATP13A1 (ENSMPUG00000015350) #12	GMIP (ENSMPUG00000015351) #13	LPAR2 (ENSMPUG00000015364) #14	PBX4 (ENSMPUG00000015365) #15	CILP2 (ENSMPUG00000015383) #16	YJEFN3 (ENSMPUG00000015390) #17	TSSK6 (ENSMPUG00000019662) #19	GATAD2A (ENSMPUG00000015399) #20	MAU2 (ENSMPUG00000015402) #21	SUGP1 (ENSMPUG00000015404) #22	TM6SF2 (ENSMPUG00000015407) #23	HAPLN4 (ENSMPUG00000015424) #24	NCAN (ENSMPUG00000015433) #25	NR2C2AP (ENSMPUG00000015462) #26	RFXANK (ENSMPUG00000015469) #27	BORCS8 (ENSMPUG00000015471) #28	MEF2B (ENSMPUG00000015473) #29	TMEM161A (ENSMPUG00000015475) #30	SLC25A42 (ENSMPUG00000015477) #31	SUGP2 (ENSMPUG00000015478) #33	HOMER3 (ENSMPUG00000015484) #34	DDX49 (ENSMPUG00000015485) #35	COPE (ENSMPUG00000015486) #36	CERS1 (ENSMPUG00000015497) #37	GDF1 (ENSMPUG00000015514)
Ursidae	ANCESTRAL SPECIES	11	ENSGT00390000012690 #7	ENSGT00940000156463 #8	ENSGT00390000001296 #9	ENSGT00940000153104.e.a.a.b #10	ENSGT00940000163095.b #11	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Giant Panda	MODERN SPECIES	14	TMEM42 (ENSAMEG00000012098) #7	KIF15 (ENSAMEG00000012038) #8	KIAA1143 (ENSAMEG00000012027) #9	ENSAMEG00000019371 #10	ENSAMEG00000012026 #11	ENSAMEG00000011962 #12	GMIP (ENSAMEG00000011931) #13	LPAR2 (ENSAMEG00000024299) #14	PBX4 (ENSAMEG00000011909) #15	CILP2 (ENSAMEG00000011906) #16	YJEFN3 (ENSAMEG00000030667) #17	NDUFA13 (ENSAMEG00000011893) #18	TSSK6 (ENSAMEG00000019351) #19	GATAD2A (ENSAMEG00000011882) #20	MAU2 (ENSAMEG00000011868) #21	SUGP1 (ENSAMEG00000011838) #22	TM6SF2 (ENSAMEG00000011811) #23	HAPLN4 (ENSAMEG00000027731) #24	NCAN (ENSAMEG00000011734) #25	NR2C2AP (ENSAMEG00000011727) #26	RFXANK (ENSAMEG00000011703) #27	BORCS8 (ENSAMEG00000011698) #28	MEF2B (ENSAMEG00000011682) #29	TMEM161A (ENSAMEG00000011655) #30	SLC25A42 (ENSAMEG00000027218) #31	ARMC6 (ENSAMEG00000011621) #32	SUGP2 (ENSAMEG00000011613) #33	HOMER3 (ENSAMEG00000011595) #34	DDX49 (ENSAMEG00000011566) #35	COPE (ENSAMEG00000011524) #36	CERS1 (ENSAMEG00000011517) #37
Ursus	ANCESTRAL SPECIES	5	ENSGT00390000012690 #7	ENSGT00940000156463 #8	ENSGT00390000001296 #9	ENSGT00940000153104.e.a.a.b #10	ENSGT00940000163095.b #11	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Polar bear	MODERN SPECIES	255	ENSUMAG00000005734	TMEM42 (ENSUMAG00000005738) #7	KIF15 (ENSUMAG00000005764) #8	KIAA1143 (ENSUMAG00000005959) #9	ZNF501 (ENSUMAG00000005963) #10	ZNF502 (ENSUMAG00000005965) #11	ATP13A1 (ENSUMAG00000005989) #12	GMIP (ENSUMAG00000006087) #13	LPAR2 (ENSUMAG00000006117) #14	PBX4 (ENSUMAG00000006125) #15	ENSUMAG00000006179 #17	NDUFA13 (ENSUMAG00000006183) #18	TSSK6 (ENSUMAG00000006185) #19	GATAD2A (ENSUMAG00000006192) #20	MAU2 (ENSUMAG00000006229) #21	SUGP1 (ENSUMAG00000006358) #22	TM6SF2 (ENSUMAG00000006368) #23	NCAN (ENSUMAG00000006378) #25	NR2C2AP (ENSUMAG00000006411) #26	RFXANK (ENSUMAG00000006419) #27	BORCS8 (ENSUMAG00000006425) #28	MEF2B (ENSUMAG00000006437) #29	TMEM161A (ENSUMAG00000006455) #30	SLC25A42 (ENSUMAG00000006458) #31	ARMC6 (ENSUMAG00000006462) #32	SUGP2 (ENSUMAG00000006467) #33	HOMER3 (ENSUMAG00000006477) #34	DDX49 (ENSUMAG00000006489) #35	COPE (ENSUMAG00000006505) #36	UPF1 (ENSUMAG00000006652)	COMP (ENSUMAG00000007436)
American black bear	DUPLICATION
American black bear	MODERN SPECIES		ENSUAMG00000001974	ENSUAMG00000001965	TMEM42 (ENSUAMG00000001960) #7	KIF15 (ENSUAMG00000001916) #8	KIAA1143 (ENSUAMG00000001910) #9	ZNF501 (ENSUAMG00000001908) #10	ZNF502 (ENSUAMG00000001904) #11	ATP13A1 (ENSUAMG00000001148) #12	LPAR2 (ENSUAMG00000001027) #14	PBX4 (ENSUAMG00000000763) #15	CILP2 (ENSUAMG00000000697) #16	YJEFN3 (ENSUAMG00000000690) #17	NDUFA13 (ENSUAMG00000000686) #18	TSSK6 (ENSUAMG00000000680) #19	GATAD2A (ENSUAMG00000000666) #20	ENSUAMG00000000653 #22	MAU2 (ENSUAMG00000000016) #21	SUGP1 (ENSUAMG00000000010) #22	TM6SF2 (ENSUAMG00000000009) #23	HAPLN4 (ENSUAMG00000000008) #24	NCAN (ENSUAMG00000000007) #25	NR2C2AP (ENSUAMG00000000006) #26	RFXANK (ENSUAMG00000000005) #27	BORCS8 (ENSUAMG00000000004) #28	MEF2B (ENSUAMG00000000003) #29	TMEM161A (ENSUAMG00000000002) #30	SLC25A42 (ENSUAMG00000000001) #31
American black bear	MODERN SPECIES		TMEM42 (ENSUAMG00000001960) #7	KIF15 (ENSUAMG00000001916) #8	KIAA1143 (ENSUAMG00000001910) #9	ZNF501 (ENSUAMG00000001908) #10	ZNF502 (ENSUAMG00000001904) #11	ATP13A1 (ENSUAMG00000001148) #12	LPAR2 (ENSUAMG00000001027) #14	PBX4 (ENSUAMG00000000763) #15	CILP2 (ENSUAMG00000000697) #16	YJEFN3 (ENSUAMG00000000690) #17	NDUFA13 (ENSUAMG00000000686) #18	TSSK6 (ENSUAMG00000000680) #19	GATAD2A (ENSUAMG00000000666) #20	ENSUAMG00000000653 #22	MAU2 (ENSUAMG00000000016) #21	SUGP1 (ENSUAMG00000000010) #22	TM6SF2 (ENSUAMG00000000009) #23	HAPLN4 (ENSUAMG00000000008) #24	NCAN (ENSUAMG00000000007) #25	NR2C2AP (ENSUAMG00000000006) #26	RFXANK (ENSUAMG00000000005) #27	BORCS8 (ENSUAMG00000000004) #28	MEF2B (ENSUAMG00000000003) #29	TMEM161A (ENSUAMG00000000002) #30	SLC25A42 (ENSUAMG00000000001) #31
Canidae	ANCESTRAL SPECIES		ENSGT00940000156463 #8	ENSGT00390000001296 #9	ENSGT00950000182890.D.d.c.d	ENSGT00940000163095.b #11	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00960000189525	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478.b #36	ENSGT01030000234515.b #37
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00940000156463 #8	ENSGT00390000001296 #9	ENSGT00950000182890.D.d.c.d	ENSGT00940000163095.b #11	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00960000189525	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478.b #36	ENSGT01030000234515.b #37
Dingo	MODERN SPECIES	112	TMEM42 (ENSCAFG00020013305) #7	KIF15 (ENSCAFG00020013252) #8	KIAA1143 (ENSCAFG00020013246) #9	ZNF502 (ENSCAFG00020013240) #11	ATP13A1 (ENSCAFG00020012802) #12	GMIP (ENSCAFG00020012761) #13	LPAR2 (ENSCAFG00020012758) #14	PBX4 (ENSCAFG00020012739) #15	CILP2 (ENSCAFG00020012728) #16	YJEFN3 (ENSCAFG00020012724) #17	ENSCAFG00020012723	NDUFA13 (ENSCAFG00020012721) #18	TSSK6 (ENSCAFG00020012717) #19	GATAD2A (ENSCAFG00020012715) #20	MAU2 (ENSCAFG00020012543) #21	SUGP1 (ENSCAFG00020012508) #22	TM6SF2 (ENSCAFG00020012504) #23	HAPLN4 (ENSCAFG00020012500) #24	NCAN (ENSCAFG00020012454) #25	NR2C2AP (ENSCAFG00020012443) #26	RFXANK (ENSCAFG00020012437) #27	BORCS8 (ENSCAFG00020012435) #28	MEF2B (ENSCAFG00020012425) #29	TMEM161A (ENSCAFG00020012412) #30	SLC25A42 (ENSCAFG00020012408) #31	ARMC6 (ENSCAFG00020012404) #32	SUGP2 (ENSCAFG00020012392) #33	HOMER3 (ENSCAFG00020012389) #34	DDX49 (ENSCAFG00020012375) #35	COPE (ENSCAFG00020012363) #36	CERS1 (ENSCAFG00020012351) #37
Dog	MODERN SPECIES	12	ENSCAFG00845013403 #7	KIF15 (ENSCAFG00845013570) #8	KIAA1143 (ENSCAFG00845013959) #9	ENSCAFG00845013976	ENSCAFG00845014000 #11	ATP13A1 (ENSCAFG00845014060) #12	GMIP (ENSCAFG00845014134) #13	LPAR2 (ENSCAFG00845014191) #14	PBX4 (ENSCAFG00845014230) #15	CILP2 (ENSCAFG00845014273) #16	YJEFN3 (ENSCAFG00845014306) #17	NDUFA13 (ENSCAFG00845014336) #18	TSSK6 (ENSCAFG00845014349) #19	GATAD2A (ENSCAFG00845014383) #20	MAU2 (ENSCAFG00845014470) #21	SUGP1 (ENSCAFG00845014514) #22	TM6SF2 (ENSCAFG00845014561) #23	HAPLN4 (ENSCAFG00845014588) #24	NCAN (ENSCAFG00845014625) #25	RFXANK (ENSCAFG00845014775) #27	NR2C2AP (ENSCAFG00845018085) #26	BORCS8 (ENSCAFG00845018185) #28	MEF2B (ENSCAFG00845018253) #29	TMEM161A (ENSCAFG00845018423) #30	SLC25A42 (ENSCAFG00845018653) #31	ARMC6 (ENSCAFG00845018765) #32	SUGP2 (ENSCAFG00845018888) #33	HOMER3 (ENSCAFG00845019115) #34	DDX49 (ENSCAFG00845019266) #35	COPE (ENSCAFG00845019400) #36	CERS1 (ENSCAFG00845019662) #37
Red fox	MODERN SPECIES	5	TMEM42 (ENSVVUG00000007057) #7	KIF15 (ENSVVUG00000007077) #8	KIAA1143 (ENSVVUG00000007169) #9	ENSVVUG00000007176	ZNF502 (ENSVVUG00000007182) #11	ATP13A1 (ENSVVUG00000007184) #12	GMIP (ENSVVUG00000007227) #13	LPAR2 (ENSVVUG00000007473) #14	PBX4 (ENSVVUG00000007478) #15	CILP2 (ENSVVUG00000007489) #16	YJEFN3 (ENSVVUG00000007502) #17	NDUFA13 (ENSVVUG00000007513) #18	TSSK6 (ENSVVUG00000007516) #19	GATAD2A (ENSVVUG00000007522) #20	MAU2 (ENSVVUG00000007527) #21	SUGP1 (ENSVVUG00000007569) #22	TM6SF2 (ENSVVUG00000007584) #23	HAPLN4 (ENSVVUG00000007594) #24	NCAN (ENSVVUG00000007597) #25	NR2C2AP (ENSVVUG00000007609) #26	RFXANK (ENSVVUG00000007633) #27	BORCS8 (ENSVVUG00000007667) #28	MEF2B (ENSVVUG00000007672) #29	TMEM161A (ENSVVUG00000007683) #30	SLC25A42 (ENSVVUG00000007728) #31	ARMC6 (ENSVVUG00000007731) #32	SUGP2 (ENSVVUG00000007744) #33	HOMER3 (ENSVVUG00000007758) #34	DDX49 (ENSVVUG00000007767) #35	ENSVVUG00000007777 #36	CERS1 (ENSVVUG00000007783) #37
Felidae	ANCESTRAL SPECIES	17	ENSGT00390000012690 #7	ENSGT00940000156463 #8	ENSGT00390000001296 #9	ENSGT00950000182890.D.d.c	ENSGT00940000163095.b #11	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Panthera	ANCESTRAL SPECIES	1	ENSGT00390000012690 #7	ENSGT00940000156463.e #8	ENSGT00390000001296 #9	ENSGT00950000182890.D.d.c	ENSGT00940000163095.b #11	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Panthera_a	ANCESTRAL SPECIES		ENSGT00390000012690 #7	ENSGT00940000156463.e #8	ENSGT00390000001296 #9	ENSGT00950000182890.D.d.c	ENSGT00940000163095.b #11	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
lion	MODERN SPECIES	2	TMEM42 (ENSPLOG00000001938) #7	KIF15 (ENSPLOG00000001861) #8	KIAA1143 (ENSPLOG00000001819) #9	ENSPLOG00000001812	ZNF502 (ENSPLOG00000001805) #11	ATP13A1 (ENSPLOG00000001767) #12	GMIP (ENSPLOG00000001614) #13	LPAR2 (ENSPLOG00000001569) #14	PBX4 (ENSPLOG00000001560) #15	CILP2 (ENSPLOG00000001532) #16	YJEFN3 (ENSPLOG00000001517) #17	NDUFA13 (ENSPLOG00000001502) #18	TSSK6 (ENSPLOG00000001493) #19	GATAD2A (ENSPLOG00000001463) #20	MAU2 (ENSPLOG00000001424) #21	SUGP1 (ENSPLOG00000001334) #22	TM6SF2 (ENSPLOG00000001308) #23	HAPLN4 (ENSPLOG00000001286) #24	NCAN (ENSPLOG00000001120) #25	ENSPLOG00000000980 #26	RFXANK (ENSPLOG00000000919) #27	BORCS8 (ENSPLOG00000000887) #28	MEF2B (ENSPLOG00000000863) #29	TMEM161A (ENSPLOG00000000833) #30	SLC25A42 (ENSPLOG00000000808) #31	ARMC6 (ENSPLOG00000000792) #32	SUGP2 (ENSPLOG00000000772) #33	HOMER3 (ENSPLOG00000000722) #34	DDX49 (ENSPLOG00000000667) #35	COPE (ENSPLOG00000000628) #36	CERS1 (ENSPLOG00000000599) #37
leopard	MODERN SPECIES	68	KIF15 (ENSPPRG00000010780) #8	KIAA1143 (ENSPPRG00000011059) #9	ENSPPRG00000015943	ZNF502 (ENSPPRG00000011352) #11	ENSPPRG00000011672	ATP13A1 (ENSPPRG00000014180) #12	GMIP (ENSPPRG00000016893) #13	LPAR2 (ENSPPRG00000018123) #14	PBX4 (ENSPPRG00000020424) #15	CILP2 (ENSPPRG00000023737) #16	YJEFN3 (ENSPPRG00000023619) #17	NDUFA13 (ENSPPRG00000022807) #18	TSSK6 (ENSPPRG00000016235) #19	GATAD2A (ENSPPRG00000000270) #20	MAU2 (ENSPPRG00000000643) #21	SUGP1 (ENSPPRG00000000880) #22	TM6SF2 (ENSPPRG00000001208) #23	HAPLN4 (ENSPPRG00000001581) #24	NR2C2AP (ENSPPRG00000003111) #26	RFXANK (ENSPPRG00000004266) #27	BORCS8 (ENSPPRG00000004580) #28	MEF2B (ENSPPRG00000006317) #29	TMEM161A (ENSPPRG00000008638) #30	SLC25A42 (ENSPPRG00000008936) #31	ARMC6 (ENSPPRG00000009582) #32	SUGP2 (ENSPPRG00000010924) #33	HOMER3 (ENSPPRG00000013004) #34	DDX49 (ENSPPRG00000013274) #35	COPE (ENSPPRG00000019668) #36	CERS1 (ENSPPRG00000021419) #37	GDF1 (ENSPPRG00000024438)
Tiger	MODERN SPECIES	281	TMEM42 (ENSPTIG00000013807) #7	ENSPTIG00000013744 #8	ENSPTIG00000013732 #8	KIAA1143 (ENSPTIG00000013723) #9	ENSPTIG00000006544	ZNF502 (ENSPTIG00000013634) #11	GMIP (ENSPTIG00000013444) #13	LPAR2 (ENSPTIG00000013412) #14	PBX4 (ENSPTIG00000013405) #15	CILP2 (ENSPTIG00000013349) #16	YJEFN3 (ENSPTIG00000013321) #17	NDUFA13 (ENSPTIG00000013303) #18	TSSK6 (ENSPTIG00000006514) #19	GATAD2A (ENSPTIG00000013272) #20	MAU2 (ENSPTIG00000013179) #21	SUGP1 (ENSPTIG00000013061) #22	TM6SF2 (ENSPTIG00000013026) #23	HAPLN4 (ENSPTIG00000013017) #24	NR2C2AP (ENSPTIG00000012962) #26	RFXANK (ENSPTIG00000012655) #27	BORCS8 (ENSPTIG00000012610) #28	MEF2B (ENSPTIG00000012475) #29	TMEM161A (ENSPTIG00000012395) #30	SLC25A42 (ENSPTIG00000012354) #31	ARMC6 (ENSPTIG00000012073) #32	SUGP2 (ENSPTIG00000012003) #33	HOMER3 (ENSPTIG00000011533) #34	DDX49 (ENSPTIG00000011259) #35	COPE (ENSPTIG00000010957) #36	CERS1 (ENSPTIG00000010849) #37	GDF1 (ENSPTIG00000010670)
Cat	MODERN SPECIES	1	TMEM42 (ENSFCAG00000007645) #7	KIF15 (ENSFCAG00000007640) #8	KIAA1143 (ENSFCAG00000007638) #9	ENSFCAG00000042601	ZNF502 (ENSFCAG00000024223) #11	ATP13A1 (ENSFCAG00000014541) #12	GMIP (ENSFCAG00000014540) #13	LPAR2 (ENSFCAG00000014538) #14	PBX4 (ENSFCAG00000014536) #15	CILP2 (ENSFCAG00000014331) #16	YJEFN3 (ENSFCAG00000014330) #17	NDUFA13 (ENSFCAG00000014329) #18	TSSK6 (ENSFCAG00000014328) #19	GATAD2A (ENSFCAG00000014327) #20	MAU2 (ENSFCAG00000009780) #21	SUGP1 (ENSFCAG00000009779) #22	HAPLN4 (ENSFCAG00000022898) #24	NCAN (ENSFCAG00000008376) #25	NR2C2AP (ENSFCAG00000009777) #26	RFXANK (ENSFCAG00000009775) #27	BORCS8 (ENSFCAG00000047348) #28	MEF2B (ENSFCAG00000009774) #29	TMEM161A (ENSFCAG00000009771) #30	SLC25A42 (ENSFCAG00000009770) #31	ARMC6 (ENSFCAG00000009767) #32	SUGP2 (ENSFCAG00000009765) #33	HOMER3 (ENSFCAG00000009762) #34	DDX49 (ENSFCAG00000009760) #35	CERS1 (ENSFCAG00000023920) #36	UPF1 (ENSFCAG00000009757)	COMP (ENSFCAG00000009754)
Laurasiatheria_c	ANCESTRAL SPECIES	16					ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Chiroptera	ANCESTRAL SPECIES	44						ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Microchiroptera	ANCESTRAL SPECIES	43					ENSGT00940000157178	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Greater horseshoe bat	MODERN SPECIES	9	TMA16 (ENSRFEG00010007959)	ENSRFEG00010007896	MARCHF1 (ENSRFEG00010007829)	LPL (ENSRFEG00010007714)	ENSRFEG00010007665	ATP13A1 (ENSRFEG00010007191) #12	GMIP (ENSRFEG00010007096) #13	LPAR2 (ENSRFEG00010007041) #14	PBX4 (ENSRFEG00010006894) #15	CILP2 (ENSRFEG00010006782) #16	YJEFN3 (ENSRFEG00010006740) #17	NDUFA13 (ENSRFEG00010006692) #18	TSSK6 (ENSRFEG00010006656) #19	GATAD2A (ENSRFEG00010006588) #20	MAU2 (ENSRFEG00010006479) #21	SUGP1 (ENSRFEG00010006391) #22	TM6SF2 (ENSRFEG00010006340) #23	HAPLN4 (ENSRFEG00010006311) #24	NCAN (ENSRFEG00010006275) #25	NR2C2AP (ENSRFEG00010006230) #26	RFXANK (ENSRFEG00010006139) #27	BORCS8 (ENSRFEG00010006052) #28	MEF2B (ENSRFEG00010005974) #29	TMEM161A (ENSRFEG00010005885) #30	SLC25A42 (ENSRFEG00010005823) #31	ARMC6 (ENSRFEG00010005797) #32	SUGP2 (ENSRFEG00010005746) #33	HOMER3 (ENSRFEG00010005693) #34	DDX49 (ENSRFEG00010005585) #35	CERS1 (ENSRFEG00010005439) #37	GDF1 (ENSRFEG00010020888)
Microbat	MODERN SPECIES	1248					ENSMLUG00000026606	LPL (ENSMLUG00000000724)	ATP13A1 (ENSMLUG00000007903) #12	GMIP (ENSMLUG00000023678) #13	LPAR2 (ENSMLUG00000007886) #14	CILP2 (ENSMLUG00000017369) #16	YJEFN3 (ENSMLUG00000017368) #17	NDUFA13 (ENSMLUG00000017367) #18	TSSK6 (ENSMLUG00000017365) #19	GATAD2A (ENSMLUG00000017364) #20	MAU2 (ENSMLUG00000017362) #21	SUGP1 (ENSMLUG00000017360) #22	TM6SF2 (ENSMLUG00000027634) #23	HAPLN4 (ENSMLUG00000017358) #24	NCAN (ENSMLUG00000017356) #25	NR2C2AP (ENSMLUG00000017355) #26	RFXANK (ENSMLUG00000017354) #27	BORCS8 (ENSMLUG00000025095) #28	MEF2B (ENSMLUG00000003299) #29	TMEM161A (ENSMLUG00000017352) #30	SLC25A42 (ENSMLUG00000012208) #31	ENSMLUG00000012203 #32	SUGP2 (ENSMLUG00000012189) #33	ENSMLUG00000025755	HOMER3 (ENSMLUG00000012170) #34	DDX49 (ENSMLUG00000012159) #35	COPE (ENSMLUG00000012147) #36
Megabat	MODERN SPECIES	1678							ATP13A1 (ENSPVAG00000017462) #12	GMIP (ENSPVAG00000017461) #13	LPAR2 (ENSPVAG00000017460) #14	PBX4 (ENSPVAG00000017459) #15	CILP2 (ENSPVAG00000017456) #16	YJEFN3 (ENSPVAG00000017455) #17	NDUFA13 (ENSPVAG00000017454) #18	GATAD2A (ENSPVAG00000017453) #20	MAU2 (ENSPVAG00000017452) #21	SUGP1 (ENSPVAG00000017451) #22	TM6SF2 (ENSPVAG00000017449) #23	HAPLN4 (ENSPVAG00000017448) #24	NCAN (ENSPVAG00000017445) #25	NR2C2AP (ENSPVAG00000017442) #26	RFXANK (ENSPVAG00000017440) #27	MEF2B (ENSPVAG00000017435) #29
Equus	ANCESTRAL SPECIES	23	ENSGT00940000162327	ENSGT00940000163610	ENSGT00940000161175	ENSGT01100000263521.a.a.b.a.b.b	ENSGT00390000018500.a	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643 #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00940000160464 #19	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37	ENSGT00940000162926
Donkey	MODERN SPECIES		ENSEASG00005006758	ENSEASG00005006754	ZNF692 (ENSEASG00005006750)	ZNF672 (ENSEASG00005035295)	ENSEASG00005006747	ENSEASG00005006649 #12	GMIP (ENSEASG00005006622) #13	LPAR2 (ENSEASG00005031542) #14	ENSEASG00005033171 #15	CILP2 (ENSEASG00005006616) #16	YJEFN3 (ENSEASG00005006613) #17	ENSEASG00005028100	TSSK6 (ENSEASG00005006607) #19	GATAD2A (ENSEASG00005006602) #20	MAU2 (ENSEASG00005006596) #21	SUGP1 (ENSEASG00005006593) #22	HAPLN4 (ENSEASG00005006590) #24	NCAN (ENSEASG00005006587) #25	NR2C2AP (ENSEASG00005027263) #26	RFXANK (ENSEASG00005006582) #27	BORCS8 (ENSEASG00005006580) #28	MEF2B (ENSEASG00005006578) #29	TMEM161A (ENSEASG00005006575) #30	SLC25A42 (ENSEASG00005006570) #31	ARMC6 (ENSEASG00005006568) #32	SUGP2 (ENSEASG00005006565) #33	HOMER3 (ENSEASG00005006562) #34	DDX49 (ENSEASG00005006560) #35	COPE (ENSEASG00005006557) #36	CERS1 (ENSEASG00005030456) #37	GDF1 (ENSEASG00005029430)
Horse	MODERN SPECIES	13	ZNF672 (ENSECAG00000013991)	SH3BP5L (ENSECAG00000000789)	ENSECAG00000049438	ENSECAG00000045987	ENSECAG00000040482	ATP13A1 (ENSECAG00000020569) #12	GMIP (ENSECAG00000011647) #13	LPAR2 (ENSECAG00000009148) #14	ENSECAG00000044009 #15	CILP2 (ENSECAG00000000250) #16	YJEFN3 (ENSECAG00000018123) #17	TSSK6 (ENSECAG00000051056) #19	ENSECAG00000017590	GATAD2A (ENSECAG00000012875) #20	MAU2 (ENSECAG00000001359) #21	SUGP1 (ENSECAG00000013871) #22	HAPLN4 (ENSECAG00000020045) #24	NCAN (ENSECAG00000016115) #25	NR2C2AP (ENSECAG00000015219) #26	RFXANK (ENSECAG00000009442) #27	BORCS8 (ENSECAG00000007592) #28	MEF2B (ENSECAG00000022642) #29	TMEM161A (ENSECAG00000013963) #30	SLC25A42 (ENSECAG00000011367) #31	ARMC6 (ENSECAG00000006428) #32	SUGP2 (ENSECAG00000000129) #33	HOMER3 (ENSECAG00000023105) #34	DDX49 (ENSECAG00000012194) #35	COPE (ENSECAG00000024390) #36	CERS1 (ENSECAG00000052582) #37	GDF1 (ENSECAG00000026851)
Artiodactyla	ANCESTRAL SPECIES	22						ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Suina	ANCESTRAL SPECIES	39	ENSGT00940000160338	ENSGT00940000162750	ENSGT00530000063632.B	ENSGT00960000186612.A.m.b	ENSGT00960000186612.A.m.a	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Pig	MODERN SPECIES	10	MGAT1 (ENSSSCG00000014538)	ENSSSCG00000033438	ENSSSCG00000043984	ENSSSCG00000038707	ENSSSCG00000061333	ATP13A1 (ENSSSCG00000013930) #12	GMIP (ENSSSCG00000013931) #13	LPAR2 (ENSSSCG00000013932) #14	PBX4 (ENSSSCG00000013933) #15	CILP2 (ENSSSCG00000013934) #16	YJEFN3 (ENSSSCG00000013935) #17	NDUFA13 (ENSSSCG00000056961) #18	TSSK6 (ENSSSCG00000013937) #19	GATAD2A (ENSSSCG00000013938) #20	MAU2 (ENSSSCG00000021664) #21	SUGP1 (ENSSSCG00000036970) #22	ENSSSCG00000048260	TM6SF2 (ENSSSCG00000059192) #23	HAPLN4 (ENSSSCG00000034887) #24	NCAN (ENSSSCG00000032131) #25	NR2C2AP (ENSSSCG00000023658) #26	RFXANK (ENSSSCG00000036310) #27	BORCS8 (ENSSSCG00000044084) #28	MEF2B (ENSSSCG00000030351) #29	TMEM161A (ENSSSCG00000033168) #30	SLC25A42 (ENSSSCG00000013927) #31	ENSSSCG00000044637	ARMC6 (ENSSSCG00000049430) #32	SUGP2 (ENSSSCG00000025839) #33	HOMER3 (ENSSSCG00000013919) #34	DDX49 (ENSSSCG00000025329) #35
Chacoan peccary	MODERN SPECIES	769	BTNL9 (ENSCWAG00000009419)	ZFP62 (ENSCWAG00000009392)	MGAT1 (ENSCWAG00000009379)	ENSCWAG00000009337	ENSCWAG00000009299	ATP13A1 (ENSCWAG00000009122) #12	GMIP (ENSCWAG00000009054) #13	LPAR2 (ENSCWAG00000009001) #14	PBX4 (ENSCWAG00000008974) #15	CILP2 (ENSCWAG00000008907) #16	YJEFN3 (ENSCWAG00000008846) #17	NDUFA13 (ENSCWAG00000008819) #18	TSSK6 (ENSCWAG00000008796) #19	GATAD2A (ENSCWAG00000008702) #20	MAU2 (ENSCWAG00000008506) #21	SUGP1 (ENSCWAG00000008452) #22	TM6SF2 (ENSCWAG00000008344) #23	HAPLN4 (ENSCWAG00000008277) #24	NCAN (ENSCWAG00000007920) #25	NR2C2AP (ENSCWAG00000007805) #26	RFXANK (ENSCWAG00000020046) #27	BORCS8 (ENSCWAG00000019997) #28	MEF2B (ENSCWAG00000019951) #29	TMEM161A (ENSCWAG00000019820) #30	SLC25A42 (ENSCWAG00000019779) #31	ARMC6 (ENSCWAG00000019757) #32	SUGP2 (ENSCWAG00000019735) #33	HOMER3 (ENSCWAG00000019671) #34	DDX49 (ENSCWAG00000019644) #35	COPE (ENSCWAG00000019578) #36	CERS1 (ENSCWAG00000019515) #37
Artiodactyla_a	ANCESTRAL SPECIES	23						ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Artiodactyla_b	ANCESTRAL SPECIES	23						ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000163783	ENSGT00950000183069.b	ENSGT00950000183216.d.a.a.b.a.a.a.b.b	ENSGT00950000183216.d.a.a.b.a.a.b.b.a.a	ENSGT00940000162084	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000154619.g.b.a.a	ENSGT00940000163146	ENSGT00940000162532	ENSGT00940000162241	ENSGT00940000163783	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Sperm whale	MODERN SPECIES	11	ZNF317 (ENSPCTG00005013391)	OR7G3 (ENSPCTG00005013334)	ENSPCTG00005013280	ENSPCTG00005013185	ENSPCTG00005013155	ENSPCTG00005013134	ATP13A1 (ENSPCTG00005013057) #12	GMIP (ENSPCTG00005012997) #13	LPAR2 (ENSPCTG00005012960) #14	ENSPCTG00005012928 #15	ENSPCTG00005012911	CILP2 (ENSPCTG00005012782) #16	YJEFN3 (ENSPCTG00005012712) #17	NDUFA13 (ENSPCTG00005012668) #18	TSSK6 (ENSPCTG00005012651) #19	SUGP1 (ENSPCTG00005012419) #22	TM6SF2 (ENSPCTG00005012374) #23	HAPLN4 (ENSPCTG00005012308) #24	NCAN (ENSPCTG00005012150) #25	NR2C2AP (ENSPCTG00005012090) #26	RFXANK (ENSPCTG00005012057) #27	BORCS8 (ENSPCTG00005011972) #28	CRTC1 (ENSPCTG00005011514)	COMP (ENSPCTG00005011285)	KLHL26 (ENSPCTG00005011236)	ENSPCTG00005011193	PGPEP1 (ENSPCTG00005011099)	MAP1S (ENSPCTG00005011006)	UNC13A (ENSPCTG00005008632)	KCNN1 (ENSPCTG00005008359)	ENSPCTG00005008284
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.a.b	ENSGT00440000039287	ENSGT00940000163783	ENSGT00940000162532	ENSGT00940000162241	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719.g #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Dolphin	MODERN SPECIES	2460						ATP13A1 (ENSTTRG00000009893) #12	GMIP (ENSTTRG00000009891) #13	LPAR2 (ENSTTRG00000009889) #14	PBX4 (ENSTTRG00000009886) #15	CILP2 (ENSTTRG00000009884) #16	YJEFN3 (ENSTTRG00000009882) #17	NDUFA13 (ENSTTRG00000009880) #18	TSSK6 (ENSTTRG00000009879) #19	GATAD2A (ENSTTRG00000009875) #20	MAU2 (ENSTTRG00000009871) #21	SUGP1 (ENSTTRG00000009868) #22	TM6SF2 (ENSTTRG00000009863) #23	HAPLN4 (ENSTTRG00000009848) #24
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00440000039287	ENSGT00940000163783	ENSGT00940000162532	ENSGT00940000162241	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000018299.eb.a	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719.g #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00440000039287	ENSGT00940000163783	ENSGT00940000162532	ENSGT00940000162241	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000018299.eb.a	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719.g #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Narwhal	MODERN SPECIES	298	ZNF317 (ENSMMNG00015005671)	ENSMMNG00015005730	ENSMMNG00015005751	IFT20 (ENSMMNG00015005765)	ATP13A1 (ENSMMNG00015005783) #12	GMIP (ENSMMNG00015005835) #13	LPAR2 (ENSMMNG00015005899) #14	ENSMMNG00015005954 #15	ENSMMNG00015006078	CILP2 (ENSMMNG00015006092) #16	YJEFN3 (ENSMMNG00015006128) #17	ENSMMNG00015006145 #18	TSSK6 (ENSMMNG00015006158) #19	GATAD2A (ENSMMNG00015006177) #20	MAU2 (ENSMMNG00015006228) #21	SUGP1 (ENSMMNG00015006270) #22	TM6SF2 (ENSMMNG00015006300) #23	HAPLN4 (ENSMMNG00015006325) #24	NCAN (ENSMMNG00015006441) #25	ENSMMNG00015006667 #26	RFXANK (ENSMMNG00015006700) #27	BORCS8 (ENSMMNG00015006726) #28	MEF2B (ENSMMNG00015006749) #29	TMEM161A (ENSMMNG00015006783) #30	SLC25A42 (ENSMMNG00015006831) #31	ARMC6 (ENSMMNG00015006856) #32	SUGP2 (ENSMMNG00015006879) #33	HOMER3 (ENSMMNG00015006915) #34	DDX49 (ENSMMNG00015006955) #35	COPE (ENSMMNG00015007007) #36	CERS1 (ENSMMNG00015007051) #37
Beluga whale	MODERN SPECIES	27	ZNF317 (ENSDLEG00000009793)	ENSDLEG00000009767	ENSDLEG00000009743	ENSDLEG00000009736	ATP13A1 (ENSDLEG00000009604) #12	GMIP (ENSDLEG00000009515) #13	LPAR2 (ENSDLEG00000009491) #14	ENSDLEG00000009478 #15	ENSDLEG00000009459	CILP2 (ENSDLEG00000009413) #16	YJEFN3 (ENSDLEG00000009396) #17	ENSDLEG00000009372 #18	TSSK6 (ENSDLEG00000009362) #19	GATAD2A (ENSDLEG00000009307) #20	MAU2 (ENSDLEG00000009190) #21	SUGP1 (ENSDLEG00000009158) #22	TM6SF2 (ENSDLEG00000009148) #23	HAPLN4 (ENSDLEG00000006247) #24	NCAN (ENSDLEG00000006241) #25	ENSDLEG00000006238 #26	RFXANK (ENSDLEG00000006230) #27	ENSDLEG00000006226	MEF2B (ENSDLEG00000006219) #29	TMEM161A (ENSDLEG00000006213) #30	SLC25A42 (ENSDLEG00000006206) #31	ARMC6 (ENSDLEG00000006199) #32	SUGP2 (ENSDLEG00000006190) #33	HOMER3 (ENSDLEG00000006185) #34	DDX49 (ENSDLEG00000006176) #35	COPE (ENSDLEG00000006169) #36	CERS1 (ENSDLEG00000006163) #37
Vaquita	MODERN SPECIES	14	ZNF317 (ENSPSNG00000000646)	ENSPSNG00000000667	ENSPSNG00000000682	ENSPSNG00000000694	ENSPSNG00000000709	ATP13A1 (ENSPSNG00000000739) #12	GMIP (ENSPSNG00000000833) #13	LPAR2 (ENSPSNG00000000922) #14	ENSPSNG00000000937 #15	ENSPSNG00000000965	CILP2 (ENSPSNG00000000993) #16	YJEFN3 (ENSPSNG00000001047) #17	TSSK6 (ENSPSNG00000001081) #19	GATAD2A (ENSPSNG00000001112) #20	MAU2 (ENSPSNG00000001203) #21	SUGP1 (ENSPSNG00000001311) #22	TM6SF2 (ENSPSNG00000001343) #23	HAPLN4 (ENSPSNG00000001367) #24	NCAN (ENSPSNG00000001532) #25	NR2C2AP (ENSPSNG00000001752) #26	RFXANK (ENSPSNG00000001779) #27	MEF2B (ENSPSNG00000001853) #29	TMEM161A (ENSPSNG00000001898) #30	SLC25A42 (ENSPSNG00000001921) #31	ARMC6 (ENSPSNG00000001939) #32	SUGP2 (ENSPSNG00000001966) #33	HOMER3 (ENSPSNG00000002016) #34	DDX49 (ENSPSNG00000002062) #35	COPE (ENSPSNG00000002124) #36	CERS1 (ENSPSNG00000002156) #37	GDF1 (ENSPSNG00000002175)
Blue whale	MODERN SPECIES	14	ENSBMSG00010002262	ENSBMSG00010002274	ENSBMSG00010002290	OR7C1 (ENSBMSG00010002299)	ENSBMSG00010002309	ATP13A1 (ENSBMSG00010002333) #12	GMIP (ENSBMSG00010002416) #13	LPAR2 (ENSBMSG00010002465) #14	ENSBMSG00010002474	ENSBMSG00010002498 #15	CILP2 (ENSBMSG00010002559) #16	YJEFN3 (ENSBMSG00010002588) #17	TSSK6 (ENSBMSG00010002611) #19	GATAD2A (ENSBMSG00010002620) #20	MAU2 (ENSBMSG00010002666) #21	SUGP1 (ENSBMSG00010002719) #22	TM6SF2 (ENSBMSG00010002725) #23	HAPLN4 (ENSBMSG00010002737) #24	NCAN (ENSBMSG00010002745) #25	NR2C2AP (ENSBMSG00010002762) #26	RFXANK (ENSBMSG00010002771) #27	ENSBMSG00010002783	MEF2B (ENSBMSG00010003849) #29	TMEM161A (ENSBMSG00010003877) #30	SLC25A42 (ENSBMSG00010003900) #31	ARMC6 (ENSBMSG00010003914) #32	SUGP2 (ENSBMSG00010003931) #33	HOMER3 (ENSBMSG00010003958) #34	DDX49 (ENSBMSG00010004039) #35	COPE (ENSBMSG00010004064) #36	CERS1 (ENSBMSG00010004105) #37
Pecora	ANCESTRAL SPECIES		ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00730000111029.e.a	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Yarkand deer	MODERN SPECIES	32	SNAP47 (ENSCHYG00000010619)	JMJD4 (ENSCHYG00000010663)	ENSCHYG00000010707	ZNF354B (ENSCHYG00000010723)	ENSCHYG00000010766	ATP13A1 (ENSCHYG00000010816) #12	GMIP (ENSCHYG00000011272) #13	LPAR2 (ENSCHYG00000011542) #14	PBX4 (ENSCHYG00000011654) #15	CILP2 (ENSCHYG00000012104) #16	YJEFN3 (ENSCHYG00000012151) #17	NDUFA13 (ENSCHYG00000012188) #18	TSSK6 (ENSCHYG00000012255) #19	GATAD2A (ENSCHYG00000012277) #20	MAU2 (ENSCHYG00000012428) #21	SUGP1 (ENSCHYG00000012677) #22	TM6SF2 (ENSCHYG00000012851) #23	HAPLN4 (ENSCHYG00000012901) #24	NCAN (ENSCHYG00000012951) #25	NR2C2AP (ENSCHYG00000013015) #26	RFXANK (ENSCHYG00000013090) #27	BORCS8 (ENSCHYG00000013210) #28	MEF2B (ENSCHYG00000013347) #29	TMEM161A (ENSCHYG00000013806) #30	SLC25A42 (ENSCHYG00000014137) #31	ARMC6 (ENSCHYG00000014214) #32	SUGP2 (ENSCHYG00000014360) #33	ENSCHYG00000014561 #34	DDX49 (ENSCHYG00000015448) #35	CERS1 (ENSCHYG00000015529) #37	GDF1 (ENSCHYG00000015658)
Percora_a	ANCESTRAL SPECIES		ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00730000111029.e.a	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Bovidae	ANCESTRAL SPECIES		ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00730000111029.e.a	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Bovinae	ANCESTRAL SPECIES	34	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00730000111029.e.a	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Bos	ANCESTRAL SPECIES	34	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00730000111029.e.a	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Bos_a	ANCESTRAL SPECIES	29	ENSGT00940000160510	ENSGT00940000159618	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Domestic yak	MODERN SPECIES	27	PRSS38 (ENSBGRG00000002987)	SNAP47 (ENSBGRG00000002943)	JMJD4 (ENSBGRG00000002925)	ZNF354B (ENSBGRG00000002905)	ENSBGRG00000002896	ATP13A1 (ENSBGRG00000002465) #12	GMIP (ENSBGRG00000002278) #13	LPAR2 (ENSBGRG00000002227) #14	PBX4 (ENSBGRG00000002159) #15	CILP2 (ENSBGRG00000002130) #16	YJEFN3 (ENSBGRG00000002015) #17	TSSK6 (ENSBGRG00000001976) #19	GATAD2A (ENSBGRG00000001936) #20	ENSBGRG00000001911	MAU2 (ENSBGRG00000001879) #21	SUGP1 (ENSBGRG00000001817) #22	TM6SF2 (ENSBGRG00000001786) #23	HAPLN4 (ENSBGRG00000001768) #24	NCAN (ENSBGRG00000001688) #25	NR2C2AP (ENSBGRG00000001646) #26	RFXANK (ENSBGRG00000001549) #27	ENSBGRG00000001503 #28	MEF2B (ENSBGRG00000001435) #29	TMEM161A (ENSBGRG00000001322) #30	SLC25A42 (ENSBGRG00000001293) #31	ARMC6 (ENSBGRG00000001271) #32	SUGP2 (ENSBGRG00000001227) #33	ENSBGRG00000001213 #34	HOMER3 (ENSBGRG00000001163) #34	DDX49 (ENSBGRG00000001122) #35	COPE (ENSBGRG00000001045) #36
Wild yak	MODERN SPECIES	984																SUGP1 (ENSBMUG00000014735) #22	TM6SF2 (ENSBMUG00000014742) #23	ENSBMUG00000014766 #24	NCAN (ENSBMUG00000014781) #25	NR2C2AP (ENSBMUG00000014819) #26	RFXANK (ENSBMUG00000014864) #27	BORCS8 (ENSBMUG00000014902) #28	MEF2B (ENSBMUG00000014926) #29	TMEM161A (ENSBMUG00000014965) #30	SLC25A42 (ENSBMUG00000014988) #31	ARMC6 (ENSBMUG00000015012) #32	SUGP2 (ENSBMUG00000015048) #33	HOMER3 (ENSBMUG00000015101) #34	DDX49 (ENSBMUG00000015132) #35	COPE (ENSBMUG00000015145) #36	CERS1 (ENSBMUG00000015159) #37
Bos_b	ANCESTRAL SPECIES	36	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00730000111029.e.a	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Hybrid Bos Indicus	MODERN SPECIES	26	ENSBIXG00005011249	ENSBIXG00005001061	ENSBIXG00005011259	SNAP47 (ENSBIXG00005011285)	JMJD4 (ENSBIXG00005005916)	ENSBIXG00005000504	ZNF354B (ENSBIXG00005011307)	ENSBIXG00005011324	ATP13A1 (ENSBIXG00005011383) #12	GMIP (ENSBIXG00005011455) #13	LPAR2 (ENSBIXG00005011498) #14	PBX4 (ENSBIXG00005011533) #15	CILP2 (ENSBIXG00005011569) #16	GATAD2A (ENSBIXG00005011721) #20	MAU2 (ENSBIXG00005011825) #21	SUGP1 (ENSBIXG00005011882) #22	TM6SF2 (ENSBIXG00005011902) #23	HAPLN4 (ENSBIXG00005006424) #24	NCAN (ENSBIXG00005011939) #25	NR2C2AP (ENSBIXG00005011976) #26	RFXANK (ENSBIXG00005012032) #27	BORCS8 (ENSBIXG00005012065) #28	MEF2B (ENSBIXG00005012139) #29	TMEM161A (ENSBIXG00005007436) #30	SLC25A42 (ENSBIXG00005012191) #31	ARMC6 (ENSBIXG00005012220) #32	SUGP2 (ENSBIXG00005001278) #33	HOMER3 (ENSBIXG00005000373) #34	DDX49 (ENSBIXG00005012358) #35	COPE (ENSBIXG00005012672) #36	UPF1 (ENSBIXG00005012808)
Cow	MODERN SPECIES	26	PRSS38 (ENSBTAG00000013977)	SNAP47 (ENSBTAG00000004188)	JMJD4 (ENSBTAG00000004191)	ZNF354B (ENSBTAG00000017123)	ENSBTAG00000052161	ATP13A1 (ENSBTAG00000007128) #12	GMIP (ENSBTAG00000015144) #13	LPAR2 (ENSBTAG00000004652) #14	PBX4 (ENSBTAG00000009975) #15	CILP2 (ENSBTAG00000014969) #16	YJEFN3 (ENSBTAG00000014968) #17	NDUFA13 (ENSBTAG00000007812) #18	TSSK6 (ENSBTAG00000006649) #19	GATAD2A (ENSBTAG00000003034) #20	MAU2 (ENSBTAG00000006124) #21	SUGP1 (ENSBTAG00000006116) #22	TM6SF2 (ENSBTAG00000016042) #23	HAPLN4 (ENSBTAG00000001765) #24	NCAN (ENSBTAG00000001764) #25	NR2C2AP (ENSBTAG00000001763) #26	RFXANK (ENSBTAG00000001762) #27	BORCS8 (ENSBTAG00000025817) #28	MEF2B (ENSBTAG00000001818) #29	TMEM161A (ENSBTAG00000001817) #30	SLC25A42 (ENSBTAG00000001816) #31	ARMC6 (ENSBTAG00000013291) #32	SUGP2 (ENSBTAG00000013288) #33	HOMER3 (ENSBTAG00000000813) #34	DDX49 (ENSBTAG00000000811) #35	COPE (ENSBTAG00000000810) #36	CERS1 (ENSBTAG00000037729) #37
American bison	MODERN SPECIES	3165	PRSS38 (ENSBBBG00000016108)	SNAP47 (ENSBBBG00000007139)	JMJD4 (ENSBBBG00000016083)	ZNF354B (ENSBBBG00000016063)	ENSBBBG00000016056	ATP13A1 (ENSBBBG00000003990) #12	GMIP (ENSBBBG00000016022) #13	LPAR2 (ENSBBBG00000015996) #14	PBX4 (ENSBBBG00000015984) #15	CILP2 (ENSBBBG00000015975) #16	YJEFN3 (ENSBBBG00000015957) #17	NDUFA13 (ENSBBBG00000015950) #18	TSSK6 (ENSBBBG00000015942) #19	GATAD2A (ENSBBBG00000015939) #20	MAU2 (ENSBBBG00000003961) #21	SUGP1 (ENSBBBG00000015892) #22	TM6SF2 (ENSBBBG00000015869) #23	HAPLN4 (ENSBBBG00000015855) #24	NCAN (ENSBBBG00000003940) #25	NR2C2AP (ENSBBBG00000003931) #26	RFXANK (ENSBBBG00000015745) #27	ENSBBBG00000015701 #28	MEF2B (ENSBBBG00000007138) #29	TMEM161A (ENSBBBG00000007455) #30	ARMC6 (ENSBBBG00000015629) #32	SUGP2 (ENSBBBG00000003426) #33	ENSBBBG00000003456 #34	ENSBBBG00000003467 #34	DDX49 (ENSBBBG00000015616) #35	COPE (ENSBBBG00000015595) #36	CERS1 (ENSBBBG00000015545) #37
Caprinae	ANCESTRAL SPECIES	32	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00730000111029.e.a	ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00390000000719 #18	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Rambouillet Sheep	MODERN SPECIES	21	ENSOARG00020018666	WNT9A (ENSOARG00020018708)	PRSS38 (ENSOARG00020018766)	SNAP47 (ENSOARG00020018819)	ZNF354B (ENSOARG00020018905)	ENSOARG00020018960	ATP13A1 (ENSOARG00020019002) #12	GMIP (ENSOARG00020019185) #13	LPAR2 (ENSOARG00020019376) #14	CILP2 (ENSOARG00020019527) #16	YJEFN3 (ENSOARG00020019633) #17	NDUFA13 (ENSOARG00020019709) #18	TSSK6 (ENSOARG00020019749) #19	GATAD2A (ENSOARG00020019767) #20	MAU2 (ENSOARG00020019838) #21	SUGP1 (ENSOARG00020019993) #22	TM6SF2 (ENSOARG00020020089) #23	HAPLN4 (ENSOARG00020020166) #24	NR2C2AP (ENSOARG00020020240) #26	RFXANK (ENSOARG00020020308) #27	BORCS8 (ENSOARG00020020354) #28	MEF2B (ENSOARG00020020398) #29	TMEM161A (ENSOARG00020020857) #30	SLC25A42 (ENSOARG00020020909) #31	ARMC6 (ENSOARG00020020947) #32	SUGP2 (ENSOARG00020021040) #33	ENSOARG00020021129 #34	DDX49 (ENSOARG00020021548) #35	CERS1 (ENSOARG00020021615) #37	UPF1 (ENSOARG00020003352)	COMP (ENSOARG00020003569)
Goat	MODERN SPECIES	26	ENSCHIG00000004906	SNAP47 (ENSCHIG00000025042)	JMJD4 (ENSCHIG00000001908)	ZNF354B (ENSCHIG00000024384)	ENSCHIG00000027175	ATP13A1 (ENSCHIG00000027146) #12	GMIP (ENSCHIG00000006935) #13	LPAR2 (ENSCHIG00000026267) #14	PBX4 (ENSCHIG00000020490) #15	CILP2 (ENSCHIG00000016599) #16	YJEFN3 (ENSCHIG00000022695) #17	NDUFA13 (ENSCHIG00000005106) #18	TSSK6 (ENSCHIG00000012857) #19	GATAD2A (ENSCHIG00000022449) #20	MAU2 (ENSCHIG00000018574) #21	SUGP1 (ENSCHIG00000024169) #22	TM6SF2 (ENSCHIG00000009497) #23	HAPLN4 (ENSCHIG00000017398) #24	NCAN (ENSCHIG00000023523) #25	NR2C2AP (ENSCHIG00000026754) #26	RFXANK (ENSCHIG00000009697) #27	BORCS8 (ENSCHIG00000023514) #28	MEF2B (ENSCHIG00000009022) #29	TMEM161A (ENSCHIG00000015703) #30	SLC25A42 (ENSCHIG00000017224) #31	ARMC6 (ENSCHIG00000022745) #32	SUGP2 (ENSCHIG00000000571) #33	HOMER3 (ENSCHIG00000013425) #34	DDX49 (ENSCHIG00000019910) #35	COPE (ENSCHIG00000019197) #36	CERS1 (ENSCHIG00000021209) #37
Siberian musk deer	MODERN SPECIES	1231					ATP13A1 (ENSMMSG00000018140) #12	GMIP (ENSMMSG00000018067) #13	LPAR2 (ENSMMSG00000018021) #14	PBX4 (ENSMMSG00000017955) #15	CILP2 (ENSMMSG00000017925) #16	YJEFN3 (ENSMMSG00000017864) #17	ENSMMSG00000017802 #18	TSSK6 (ENSMMSG00000017779) #19	ENSMMSG00000017748	GATAD2A (ENSMMSG00000017683) #20	MAU2 (ENSMMSG00000017598) #21	SUGP1 (ENSMMSG00000017541) #22	TM6SF2 (ENSMMSG00000017487) #23	HAPLN4 (ENSMMSG00000017463) #24	NCAN (ENSMMSG00000017015) #25	NR2C2AP (ENSMMSG00000016963) #26	RFXANK (ENSMMSG00000016859) #27	BORCS8 (ENSMMSG00000016823) #28	MEF2B (ENSMMSG00000016211) #29	TMEM161A (ENSMMSG00000016113) #30	SLC25A42 (ENSMMSG00000022673) #31	ARMC6 (ENSMMSG00000022659) #32	SUGP2 (ENSMMSG00000022643) #33	HOMER3 (ENSMMSG00000022598) #34	DDX49 (ENSMMSG00000022565) #35	COPE (ENSMMSG00000022538) #36	CERS1 (ENSMMSG00000022516) #37
Camelidae	ANCESTRAL SPECIES	64							ENSGT00550000075064 #12	ENSGT00950000183110.a #13	ENSGT01050000244941.B.c #14	ENSGT00940000162643.a #15	ENSGT00390000008152.B.a #16	ENSGT00390000007227.b #17	ENSGT00940000160464 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #29	ENSGT00390000000672.a.a #30	ENSGT00940000158163 #31	ENSGT00390000002913 #32	ENSGT00410000025695.b #33	ENSGT00940000158081 #34	ENSGT00730000111231 #35	ENSGT00390000003478 #36	ENSGT01030000234515.b #37
Arabian camel	MODERN SPECIES	14	GABRG2 (ENSCDRG00005009620)	GABRA1 (ENSCDRG00005010066)	GABRA6 (ENSCDRG00005010202)	GABRB2 (ENSCDRG00005010424)	ENSCDRG00005010558	ATP10B (ENSCDRG00005010580)	ATP13A1 (ENSCDRG00005011036) #12	GMIP (ENSCDRG00005011233) #13	LPAR2 (ENSCDRG00005011318) #14	PBX4 (ENSCDRG00005011358) #15	CILP2 (ENSCDRG00005011464) #16	YJEFN3 (ENSCDRG00005011508) #17	TSSK6 (ENSCDRG00005011623) #19	GATAD2A (ENSCDRG00005011647) #20	MAU2 (ENSCDRG00005011821) #21	SUGP1 (ENSCDRG00005011946) #22	TM6SF2 (ENSCDRG00005012037) #23	HAPLN4 (ENSCDRG00005012163) #24	NCAN (ENSCDRG00005012212) #25	NR2C2AP (ENSCDRG00005012299) #26	RFXANK (ENSCDRG00005012616) #27	ENSCDRG00005012691 #28	MEF2B (ENSCDRG00005012755) #29	TMEM161A (ENSCDRG00005012779) #30	SLC25A42 (ENSCDRG00005012927) #31	ARMC6 (ENSCDRG00005012979) #32	SUGP2 (ENSCDRG00005013031) #33	HOMER3 (ENSCDRG00005013258) #34	DDX49 (ENSCDRG00005013373) #35	COPE (ENSCDRG00005013441) #36	CERS1 (ENSCDRG00005013600) #37
Alpaca	MODERN SPECIES	2871																SUGP1 (ENSVPAG00000002122) #22	ENSVPAG00000002121 #23	NCAN (ENSVPAG00000002120) #25