Tetrapoda	ANCESTRAL SPECIES	50	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00970000194286	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT01060000249150	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Amniota	ANCESTRAL SPECIES	23	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT01060000249150	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Sauria	ANCESTRAL SPECIES	20	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00970000194286	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT01060000249150	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Archelosauria	ANCESTRAL SPECIES	20	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT01060000249150	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Cryptodira	ANCESTRAL SPECIES	19	ENSGT00530000063974.a	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Testudinoidea	ANCESTRAL SPECIES	18	ENSGT00530000063974.a	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Testudinidae	ANCESTRAL SPECIES	20	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719.a #19	ENSGT00960000189525	ENSGT00390000000719.b ##19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Goode s thornscrub tortoise	MODERN SPECIES	14	ENSGEVG00005006831 #7	ENSGEVG00005006786 #8	NR2F6 (ENSGEVG00005006760) #9	BABAM1 (ENSGEVG00005006735) #10	ANKLE1 (ENSGEVG00005006566) #11	ABHD8 (ENSGEVG00005006483) #12	MRPL34 (ENSGEVG00005006469) #13	DDA1 (ENSGEVG00005006430) #14	ANO8 (ENSGEVG00005006292) #15	GTPBP3 (ENSGEVG00005006249) #16	CILP2 (ENSGEVG00005006211) #17	YJEFN3 (ENSGEVG00005006180) #18	NDUFA13 (ENSGEVG00005006122) #19	GATAD2A (ENSGEVG00005006074) #20	MAU2 (ENSGEVG00005005539) #21	SUGP1 (ENSGEVG00005005333) #22	TM6SF2 (ENSGEVG00005005276) #23	HAPLN4 (ENSGEVG00005005235) #24	NCAN (ENSGEVG00005005147) #25	NR2C2AP (ENSGEVG00005005076) #26	RFXANK (ENSGEVG00005005039) #27	BORCS8 (ENSGEVG00005005013) #28	ENSGEVG00005004987 #29	MEF2B (ENSGEVG00005004959) #30	TMEM161A (ENSGEVG00005004899) #31	SLC25A42 (ENSGEVG00005004855) #32	ARMC6 (ENSGEVG00005004824) #33	SUGP2 (ENSGEVG00005004782) #34	ENSGEVG00005004681 #35	HOMER3 (ENSGEVG00005004624) #36	DDX49 (ENSGEVG00005004539) #37
Abingdon island giant tortoise	MODERN SPECIES		ENSCABG00000004188	BABAM1 (ENSCABG00000004192) #10	ANKLE1 (ENSCABG00000004202) #11	ABHD8 (ENSCABG00000004206) #12	MRPL34 (ENSCABG00000004210) #13	DDA1 (ENSCABG00000004212) #14	ANO8 (ENSCABG00000004215) #15	GTPBP3 (ENSCABG00000004223) #16	ENSCABG00000004225	CILP2 (ENSCABG00000004232) #17	YJEFN3 (ENSCABG00000004238) #18	ENSCABG00000004241	ENSCABG00000004244 ##19	GATAD2A (ENSCABG00000004245) #20	MAU2 (ENSCABG00000004254) #21	SUGP1 (ENSCABG00000004858) #22	TM6SF2 (ENSCABG00000004866) #23	HAPLN4 (ENSCABG00000004875) #24	NCAN (ENSCABG00000004882) #25	NR2C2AP (ENSCABG00000004889) #26	RFXANK (ENSCABG00000004891) #27	BORCS8 (ENSCABG00000004894) #28	ENSCABG00000004899 #29	MEF2B (ENSCABG00000004901) #30	TMEM161A (ENSCABG00000004904) #31	SLC25A42 (ENSCABG00000004955) #32	FLRT2 (ENSCABG00000004957)
Emydidae	ANCESTRAL SPECIES	14	ENSGT00940000165052 #8	ENSGT00940000160748 #9	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Three-toed box turtle	MODERN SPECIES	92	NR2F6 (ENSTMTG00000003288) #9	ENSTMTG00000003274	BABAM1 (ENSTMTG00000003264) #10	ANKLE1 (ENSTMTG00000003176) #11	ABHD8 (ENSTMTG00000003154) #12	MRPL34 (ENSTMTG00000003147) #13	DDA1 (ENSTMTG00000003127) #14	ANO8 (ENSTMTG00000003079) #15	GTPBP3 (ENSTMTG00000003053) #16	ENSTMTG00000003038	CILP2 (ENSTMTG00000003015) #17	YJEFN3 (ENSTMTG00000013384) #18	NDUFA13 (ENSTMTG00000013371) #19	GATAD2A (ENSTMTG00000013318) #20	MAU2 (ENSTMTG00000013280) #21	SUGP1 (ENSTMTG00000013266) #22	TM6SF2 (ENSTMTG00000013253) #23	HAPLN4 (ENSTMTG00000013225) #24	NCAN (ENSTMTG00000013156) #25	NR2C2AP (ENSTMTG00000013134) #26	RFXANK (ENSTMTG00000013105) #27	BORCS8 (ENSTMTG00000013093) #28	ENSTMTG00000013028 #29	MEF2B (ENSTMTG00000013005) #30	TMEM161A (ENSTMTG00000012984) #31	SLC25A42 (ENSTMTG00000012962) #32	ARMC6 (ENSTMTG00000012947) #33	SUGP2 (ENSTMTG00000012920) #34	ENSTMTG00000012889 #35	HOMER3 (ENSTMTG00000012853) #36	DDX49 (ENSTMTG00000012790) #37
painted turtle	MODERN SPECIES	771	ENSCPBG00000012401 #7	ENSCPBG00000012402 #8	NR2F6 (ENSCPBG00000012404) #9	BABAM1 (ENSCPBG00000012410) #10	ANKLE1 (ENSCPBG00000012416) #11	ABHD8 (ENSCPBG00000012422) #12	MRPL34 (ENSCPBG00000012424) #13	DDA1 (ENSCPBG00000012426) #14	ANO8 (ENSCPBG00000012431) #15	GTPBP3 (ENSCPBG00000012434) #16	ENSCPBG00000012437	CILP2 (ENSCPBG00000012445) #17	YJEFN3 (ENSCPBG00000012447) #18	GATAD2A (ENSCPBG00000012450) #20	MAU2 (ENSCPBG00000012453) #21	SUGP1 (ENSCPBG00000012455) #22	TM6SF2 (ENSCPBG00000012458) #23	HAPLN4 (ENSCPBG00000012460) #24	NCAN (ENSCPBG00000012461) #25	NR2C2AP (ENSCPBG00000012463) #26	RFXANK (ENSCPBG00000012464) #27	BORCS8 (ENSCPBG00000012467) #28	ENSCPBG00000012469 #29	MEF2B (ENSCPBG00000012471) #30	TMEM161A (ENSCPBG00000012479) #31	SLC25A42 (ENSCPBG00000012483) #32	ARMC6 (ENSCPBG00000012485) #33	SUGP2 (ENSCPBG00000012487) #34	ENSCPBG00000012490 #35	HOMER3 (ENSCPBG00000012496) #36	DDX49 (ENSCPBG00000012500) #37
Chinese turtle	MODERN SPECIES	1790	CCDC124 (ENSPSIG00000013042)	KCNN1 (ENSPSIG00000013049)	ENSPSIG00000013072 #8	NR2F6 (ENSPSIG00000013773) #9	BABAM1 (ENSPSIG00000014350) #10	ANKLE1 (ENSPSIG00000014550) #11	ABHD8 (ENSPSIG00000015080) #12	MRPL34 (ENSPSIG00000001128) #13	DDA1 (ENSPSIG00000015105) #14	GTPBP3 (ENSPSIG00000015510) #16	CILP2 (ENSPSIG00000015529) #17	YJEFN3 (ENSPSIG00000015540) #18	NDUFA13 (ENSPSIG00000015655) #19	GATAD2A (ENSPSIG00000015717) #20	MAU2 (ENSPSIG00000016573) #21	SUGP1 (ENSPSIG00000016889) #22	TM6SF2 (ENSPSIG00000017375) #23	HAPLN4 (ENSPSIG00000017388) #24	NCAN (ENSPSIG00000017408) #25	ENSPSIG00000017603	ENSPSIG00000001137	NR2C2AP (ENSPSIG00000017608) #26	RFXANK (ENSPSIG00000017645) #27	BORCS8 (ENSPSIG00000006585) #28	TMEM161A (ENSPSIG00000006789) #31	SLC25A42 (ENSPSIG00000007452) #32	ARMC6 (ENSPSIG00000008070) #33	SUGP2 (ENSPSIG00000008256) #34	ENSPSIG00000008490 #35	HOMER3 (ENSPSIG00000008524) #36	DDX49 (ENSPSIG00000008625) #37
Archosauria	ANCESTRAL SPECIES	16	ENSGT00530000063974.a	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT01060000249150	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Australian saltwater crocodile	MODERN SPECIES	3	PCSK4 (ENSCPRG00005015619)	REEP6 (ENSCPRG00005015622)	ENSCPRG00005015625	THOP1 (ENSCPRG00005015627)	SGTA (ENSCPRG00005015629)	SLC39A3 (ENSCPRG00005015630)	DIRAS1 (ENSCPRG00005015632)	GNG7 (ENSCPRG00005015637)	GADD45B (ENSCPRG00005015639)	ENSCPRG00005015644	CARTPT (ENSCPRG00005015645)	YJEFN3 (ENSCPRG00005015647) #18	NDUFA13 (ENSCPRG00005015651) #19	GATAD2A (ENSCPRG00005015653) #20	MAU2 (ENSCPRG00005015658) #21	SUGP1 (ENSCPRG00005015667) #22	TM6SF2 (ENSCPRG00005015672) #23	HAPLN4 (ENSCPRG00005015677) #24	NR2C2AP (ENSCPRG00005015681) #26	RFXANK (ENSCPRG00005015684) #27	BORCS8 (ENSCPRG00005015689) #28	ENSCPRG00005015692 #29	MEF2B (ENSCPRG00005015695) #30	TMEM161A (ENSCPRG00005015699) #31	SLC25A42 (ENSCPRG00005015701) #32	ARMC6 (ENSCPRG00005015704) #33	SUGP2 (ENSCPRG00005015708) #34	ENSCPRG00005015709 #35	HOMER3 (ENSCPRG00005015713) #36	DDX49 (ENSCPRG00005015719) #37	COPE (ENSCPRG00005015722)
Aves	ANCESTRAL SPECIES	20	ENSGT00530000063974.a	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT01060000249150	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
African ostrich	MODERN SPECIES	1058														GATAD2A (ENSSCUG00000019070) #20	MAU2 (ENSSCUG00000019069) #21	SUGP1 (ENSSCUG00000019068) #22	TM6SF2 (ENSSCUG00000019067) #23	NR2C2AP (ENSSCUG00000019065) #26	RFXANK (ENSSCUG00000019064) #27	BORCS8 (ENSSCUG00000019063) #28	ENSSCUG00000019062 #29
Neognathae	ANCESTRAL SPECIES	21	ENSGT00530000063974.a	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT01060000249150	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Galloanserae	ANCESTRAL SPECIES	20	ENSGT00530000063974.a	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00970000194286	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649.d #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Phasianidae	ANCESTRAL SPECIES	19	ENSGT00940000160748 #9	ENSGT00530000063974.a	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649.d #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Phasianidae_b	ANCESTRAL SPECIES	20	ENSGT00940000160748 #9	ENSGT00530000063974.a	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00970000194286	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649.d #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Chicken	MODERN SPECIES	20	NR2F6 (ENSGALG00010028581) #9	USHBP1 (ENSGALG00010028583)	BABAM1 (ENSGALG00010028586) #10	ANKLE1 (ENSGALG00010028587) #11	ABHD8 (ENSGALG00010028588) #12	DDA1 (ENSGALG00010028596) #14	ANO8 (ENSGALG00010028601) #15	GTPBP3 (ENSGALG00010028605) #16	PLVAP (ENSGALG00010028607)	ENSGALG00010028610	CILP2 (ENSGALG00010028510) #17	YJEFN3 (ENSGALG00010028511) #18	NDUFA13 (ENSGALG00010028512) #19	GATAD2A (ENSGALG00010028516) #20	MAU2 (ENSGALG00010028518) #21	SUGP1 (ENSGALG00010028523) #22	TM6SF2 (ENSGALG00010028525) #23	HAPLN4 (ENSGALG00010028379) #24	NCAN (ENSGALG00010028386) #25	NR2C2AP (ENSGALG00010028430) #26	RFXANK (ENSGALG00010028432) #27	BORCS8 (ENSGALG00010028439) #28	ENSGALG00010028443 #29	MEF2B (ENSGALG00010028444) #30	TMEM161A (ENSGALG00010028131) #31	SLC25A42 (ENSGALG00010028147) #32	ARMC6 (ENSGALG00010028150) #33	SUGP2 (ENSGALG00010028124) #34	ENSGALG00010028446 #34	ENSGALG00010028152 #35	HOMER3 (ENSGALG00010028744) #36
Turkey	MODERN SPECIES	23	ENSMGAG00000002493	ENSMGAG00000002489	ENSMGAG00000002388	ENSMGAG00000018914	ENSMGAG00000019234	USHBP1 (ENSMGAG00000019092)	ANKLE1 (ENSMGAG00000021903) #11	ABHD8 (ENSMGAG00000001860) #12	DDA1 (ENSMGAG00000003919) #14	ANO8 (ENSMGAG00000003374) #15	GTPBP3 (ENSMGAG00000020218) #16	ENSMGAG00000021153	YJEFN3 (ENSMGAG00000018230) #18	GATAD2A (ENSMGAG00000004036) #20	MAU2 (ENSMGAG00000004012) #21	SUGP1 (ENSMGAG00000003967) #22	TM6SF2 (ENSMGAG00000003934) #23	ENSMGAG00000020085	ENSMGAG00000004088	NDUFS7 (ENSMGAG00000004106)	GAMT (ENSMGAG00000022259)	DAZAP1 (ENSMGAG00000020659)	RPS15 (ENSMGAG00000004229)	APC2 (ENSMGAG00000018235)	ENSMGAG00000004216	ENSMGAG00000004238	ENSMGAG00000022068	ENSMGAG00000004246	ENSMGAG00000004273	THOP1 (ENSMGAG00000004287)	SGTA (ENSMGAG00000004305)
Japanese quail	MODERN SPECIES	20	NR2F6 (ENSCJPG00005011133) #9	USHBP1 (ENSCJPG00005011140)	BABAM1 (ENSCJPG00005011141) #10	ANKLE1 (ENSCJPG00005011145) #11	ABHD8 (ENSCJPG00005011146) #12	MRPL34 (ENSCJPG00005011147) #13	DDA1 (ENSCJPG00005011149) #14	ANO8 (ENSCJPG00005011150) #15	GTPBP3 (ENSCJPG00005011151) #16	ENSCJPG00005011152	CILP2 (ENSCJPG00005011154) #17	YJEFN3 (ENSCJPG00005011155) #18	NDUFA13 (ENSCJPG00005011156) #19	GATAD2A (ENSCJPG00005011157) #20	MAU2 (ENSCJPG00005011158) #21	SUGP1 (ENSCJPG00005011161) #22	TM6SF2 (ENSCJPG00005011166) #23	HAPLN4 (ENSCJPG00005011167) #24	NCAN (ENSCJPG00005011168) #25	ENSCJPG00005011170 #26	RFXANK (ENSCJPG00005011171) #27	BORCS8 (ENSCJPG00005011172) #28	ENSCJPG00005011173 #29	MEF2B (ENSCJPG00005011174) #30	ENSCJPG00005011175	SLC25A42 (ENSCJPG00005011178) #32	ARMC6 (ENSCJPG00005011186) #33	SUGP2 (ENSCJPG00005011187) #34	ENSCJPG00005011188 #35	ENSCJPG00005011189 #36	ENSCJPG00005011190 #36
Anatidae	ANCESTRAL SPECIES	71										ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649.d #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478
Pink-footed goose	MODERN SPECIES	308										ENSABRG00000002971	CILP2 (ENSABRG00000003000) #17	YJEFN3 (ENSABRG00000003014) #18	NDUFA13 (ENSABRG00000003036) #19	GATAD2A (ENSABRG00000003048) #20	MAU2 (ENSABRG00000003093) #21	SUGP1 (ENSABRG00000003136) #22	TM6SF2 (ENSABRG00000003169) #23	HAPLN4 (ENSABRG00000003196) #24	NCAN (ENSABRG00000003206) #25	ENSABRG00000003239 #26	RFXANK (ENSABRG00000003275) #27	BORCS8 (ENSABRG00000003310) #28	ENSABRG00000003339 #29	MEF2B (ENSABRG00000003346) #30	TMEM161A (ENSABRG00000003380) #31	SLC25A42 (ENSABRG00000003394) #32	ARMC6 (ENSABRG00000003410) #33	SUGP2 (ENSABRG00000003433) #34	HOMER3 (ENSABRG00000003480) #36	DDX49 (ENSABRG00000003533) #37	COPE (ENSABRG00000003553)
Duck	MODERN SPECIES	20	ENSAPLG00000028560	ENSAPLG00000029543	GNA11 (ENSAPLG00000004066)	ENSAPLG00000019679	ENSAPLG00000004622	S1PR4 (ENSAPLG00000001591)	NCLN (ENSAPLG00000004844)	CELF5 (ENSAPLG00000005174)	HSD11B1L (ENSAPLG00000005717)	MICOS13 (ENSAPLG00000001598)	ENSAPLG00000005780	ENSAPLG00000006355	ENSAPLG00000020158	ENSAPLG00000019522	MAU2 (ENSAPLG00000002818) #21	SUGP1 (ENSAPLG00000002500) #22	HAPLN4 (ENSAPLG00000000916) #24	ENSAPLG00000017029 #25	NR2C2AP (ENSAPLG00000016443) #26	RFXANK (ENSAPLG00000016423) #27	ENSAPLG00000025930	TMEM161A (ENSAPLG00000006657) #31	SLC25A42 (ENSAPLG00000006582) #32	ARMC6 (ENSAPLG00000006480) #33	SUGP2 (ENSAPLG00000006469) #34	HOMER3 (ENSAPLG00000008170) #36	COPE (ENSAPLG00000008757)	CERS1 (ENSAPLG00000008945)	ENSAPLG00000009148	UPF1 (ENSAPLG00000009175)	ENSAPLG00000009709
Neognathae_b	DUPLICATION
Neognathae_b	ANCESTRAL SPECIES																	ENSGT00410000025695.a.g #22
Passeriformes	ANCESTRAL SPECIES																	ENSGT00410000025695.a.g #22
Passeriformes_d	ANCESTRAL SPECIES																	ENSGT00410000025695.a.g #22
Flycatcher	MODERN SPECIES	20	DAZAP1 (ENSFALG00000014010)	RPS15 (ENSFALG00000014013)	ENSFALG00000027576	ENSFALG00000014022	ENSFALG00000028718	ENSFALG00000014020	ENSFALG00000014025	ENSFALG00000014030	THOP1 (ENSFALG00000009169)	SGTA (ENSFALG00000027653)	ENSFALG00000025438	SLC39A3 (ENSFALG00000027233)	DIRAS1 (ENSFALG00000026581)	ENSFALG00000026177 #19	ENSFALG00000027214	ENSFALG00000010583 #22	TM6SF2 (ENSFALG00000028745) #23	HAPLN4 (ENSFALG00000025367) #24	NCAN (ENSFALG00000008279) #25	NR2C2AP (ENSFALG00000008269) #26	ENSFALG00000027827	ENSFALG00000009275 #36	ENSFALG00000027136	COPE (ENSFALG00000009287)	CERS1 (ENSFALG00000009299)	UPF1 (ENSFALG00000009312)	ENSFALG00000009345	ENSFALG00000025225	CRTC1 (ENSFALG00000009377)	KLHL26 (ENSFALG00000014947)	ENSFALG00000028577
Passeriformes_g	ANCESTRAL SPECIES																	ENSGT00410000025695.a.g #22
Passeroidea	ANCESTRAL SPECIES																	ENSGT00410000025695.a.g #22
Common canary	MODERN SPECIES	173												ENSSCAG00000002718 #20	ENSSCAG00000002712	MAU2 (ENSSCAG00000002706) #21	ENSSCAG00000002704 #22	ENSSCAG00000002697 #22
Neognathae_b	ANCESTRAL SPECIES	22	ENSGT00530000063974.a	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT01060000249150	ENSGT00390000012198 #21	ENSGT00410000025695.a.h #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Passeriformes	ANCESTRAL SPECIES	34					ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00970000194286	ENSGT00390000008152.B.a #17	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT01060000249150	ENSGT00390000012198 #21	ENSGT00410000025695.a.h #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478
Great tit	MODERN SPECIES	282															MAU2 (ENSPMJG00000001205) #21	ENSPMJG00000001215 #22	TM6SF2 (ENSPMJG00000001219) #23	HAPLN4 (ENSPMJG00000001224) #24	NCAN (ENSPMJG00000001279) #25	ENSPMJG00000001294 #26	ENSPMJG00000001342 #27	BORCS8 (ENSPMJG00000001351) #28	ENSPMJG00000001365 #29	MEF2B (ENSPMJG00000001372) #30	ENSPMJG00000001384 #31
Passeriformes_d	ANCESTRAL SPECIES	35					ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019.c #15	ENSGT00390000016851 #16	ENSGT00970000194286	ENSGT00390000008152.B.a #17	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT01060000249150	ENSGT00390000012198 #21	ENSGT00410000025695.a.h #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478
Passeriformes_g	ANCESTRAL SPECIES	39					ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019.c #15	ENSGT00390000016851 #16	ENSGT00970000194286	ENSGT00390000008152.B.a #17	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT01060000249150	ENSGT00390000012198 #21	ENSGT00410000025695.a.h #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Passeroidea	ANCESTRAL SPECIES	38					ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019.c #15	ENSGT00390000016851 #16	ENSGT00970000194286	ENSGT00390000008152.B.a #17	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT01060000249150	ENSGT00390000012198 #21	ENSGT00410000025695.a.h #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Zebra finch	MODERN SPECIES	21	ANO8 (ENSTGUG00000021968) #15	ENSTGUG00000021258 #16	ENSTGUG00000019139	ENSTGUG00000023781	ENSTGUG00000024009 #18	ENSTGUG00000029553 #18	NDUFA13 (ENSTGUG00000027276) #19	GATAD2A (ENSTGUG00000013885) #20	MAU2 (ENSTGUG00000013909) #21	ENSTGUG00000024768 #8	ENSTGUG00000015926 #13	ENSTGUG00000021489 #14	ENSTGUG00000020486 #16	ENSTGUG00000026134	CILP2 (ENSTGUG00000019631) #17	SUGP1 (ENSTGUG00000013941) #22	TM6SF2 (ENSTGUG00000013966) #23	HAPLN4 (ENSTGUG00000019161) #24	NCAN (ENSTGUG00000019059) #25	ENSTGUG00000020853 #26	RFXANK (ENSTGUG00000014033) #27	ENSTGUG00000024488 #28	MEF2B (ENSTGUG00000022364) #30	ENSTGUG00000023122	TMEM161A (ENSTGUG00000025437) #31	SLC25A42 (ENSTGUG00000020561) #32	ARMC6 (ENSTGUG00000001090) #33	SUGP2 (ENSTGUG00000001088) #34	HOMER3 (ENSTGUG00000001080) #36	DDX49 (ENSTGUG00000001072) #37	ENSTGUG00000029565
Common canary	MODERN SPECIES	173													ENSSCAG00000002718 #20	ENSSCAG00000002712	MAU2 (ENSSCAG00000002706) #21	ENSSCAG00000002704 #22	ENSSCAG00000002697 #22
Medium ground finch	MODERN SPECIES	522														MAU2 (ENSGFOG00000009789) #21	ENSGFOG00000009783	SUGP1 (ENSGFOG00000009468) #22	ENSGFOG00000009453 #23	HAPLN4 (ENSGFOG00000009448) #24
Flycatcher	MODERN SPECIES	444															ENSFALG00000010868 #21	ENSFALG00000024908 #22
Neognathae_c	ANCESTRAL SPECIES	24	ENSGT00940000160748 #9	ENSGT00530000063974.a	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.h #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Kakapo	MODERN SPECIES	13	ENSSHBG00005015936 #8	NR2F6 (ENSSHBG00005015943) #9	ENSSHBG00005015946	BABAM1 (ENSSHBG00005015951) #10	ANKLE1 (ENSSHBG00005015957) #11	ABHD8 (ENSSHBG00005015962) #12	MRPL34 (ENSSHBG00005015967) #13	ANO8 (ENSSHBG00005015977) #15	GTPBP3 (ENSSHBG00005015979) #16	ENSSHBG00005015986	CILP2 (ENSSHBG00005015990) #17	YJEFN3 (ENSSHBG00005016001) #18	NDUFA13 (ENSSHBG00005016006) #19	GATAD2A (ENSSHBG00005016010) #20	MAU2 (ENSSHBG00005016045) #21	SUGP1 (ENSSHBG00005016077) #22	TM6SF2 (ENSSHBG00005016084) #23	HAPLN4 (ENSSHBG00005016090) #24	NCAN (ENSSHBG00005016099) #25	NR2C2AP (ENSSHBG00005016311) #26	RFXANK (ENSSHBG00005016324) #27	BORCS8 (ENSSHBG00005016340) #28	ENSSHBG00005016346 #29	MEF2B (ENSSHBG00005016361) #30	TMEM161A (ENSSHBG00005016377) #31	SLC25A42 (ENSSHBG00005016405) #32	ARMC6 (ENSSHBG00005016636) #33	SUGP2 (ENSSHBG00005016643) #34	ENSSHBG00005016648 #35	HOMER3 (ENSSHBG00005016668) #36	ENSSHBG00005016679 #36
Golden eagle	MODERN SPECIES	3	NR2F6 (ENSACCG00020005019) #9	USHBP1 (ENSACCG00020005028)	BABAM1 (ENSACCG00020005036) #10	ANKLE1 (ENSACCG00020005042) #11	ABHD8 (ENSACCG00020005049) #12	MRPL34 (ENSACCG00020005054) #13	DDA1 (ENSACCG00020005063) #14	ANO8 (ENSACCG00020005101) #15	GTPBP3 (ENSACCG00020005142) #16	ENSACCG00020005158	CILP2 (ENSACCG00020005178) #17	YJEFN3 (ENSACCG00020005188) #18	NDUFA13 (ENSACCG00020005202) #19	GATAD2A (ENSACCG00020005214) #20	MAU2 (ENSACCG00020005272) #21	SUGP1 (ENSACCG00020005346) #22	TM6SF2 (ENSACCG00020005379) #23	HAPLN4 (ENSACCG00020005415) #24	NCAN (ENSACCG00020005458) #25	ENSACCG00020005528	NR2C2AP (ENSACCG00020005548) #26	RFXANK (ENSACCG00020005611) #27	BORCS8 (ENSACCG00020005634) #28	ENSACCG00020005651 #29	MEF2B (ENSACCG00020005665) #30	TMEM161A (ENSACCG00020005730) #31	SLC25A42 (ENSACCG00020005755) #32	ARMC6 (ENSACCG00020005768) #33	SUGP2 (ENSACCG00020005795) #34	HOMER3 (ENSACCG00020005833) #36	DDX49 (ENSACCG00020005865) #37
Lepidosauria	ANCESTRAL SPECIES	35	ENSGT00940000160748 #9	ENSGT00530000063974.a	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081.m.b #36	ENSGT00940000167763 #35	ENSGT00940000158081.m.a #36
Episquamata	ANCESTRAL SPECIES	18	ENSGT00940000158404	ENSGT00940000159185	ENSGT00940000164108.b	ENSGT00940000163012	ENSGT00440000039287.a.a	ENSGT00670000098179	ENSGT00950000185241.b	ENSGT00940000156705	ENSGT00530000064192	ENSGT00390000000289	ENSGT00940000161021	ENSGT00390000013329	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081.m.a #36	ENSGT00730000111231 #37
Laterata	ANCESTRAL SPECIES	37	ENSGT00940000158404	ENSGT00940000159185	ENSGT00940000164108.b	ENSGT00940000163012	ENSGT00960000192150	ENSGT00670000098179	ENSGT00950000185241.b	ENSGT00940000156705	ENSGT00530000064192	ENSGT00390000000289	ENSGT00940000161021	ENSGT00390000013329	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081.m.a #36	ENSGT00730000111231 #37
Common wall lizard	MODERN SPECIES	9	ENSPMRG00000020648	ENSPMRG00000020652	ENSPMRG00000020659	ACTL9 (ENSPMRG00000020665)	ENSPMRG00000020672	FKBP8 (ENSPMRG00000020683)	ENSPMRG00000020692	ENSPMRG00000020696	KXD1 (ENSPMRG00000020710)	WDR18 (ENSPMRG00000020734)	GRIN3B (ENSPMRG00000020765)	TMEM259 (ENSPMRG00000020879)	NDUFA13 (ENSPMRG00000020953) #19	GATAD2A (ENSPMRG00000020959) #20	MAU2 (ENSPMRG00000021003) #21	SUGP1 (ENSPMRG00000021319) #22	TM6SF2 (ENSPMRG00000021377) #23	HAPLN4 (ENSPMRG00000021383) #24	NCAN (ENSPMRG00000021434) #25	NR2C2AP (ENSPMRG00000021664) #26	RFXANK (ENSPMRG00000021677) #27	ENSPMRG00000021683	ENSPMRG00000021689 #29	MEF2B (ENSPMRG00000021693) #30	TMEM161A (ENSPMRG00000021702) #31	SLC25A42 (ENSPMRG00000021711) #32	ENSPMRG00000021717 #33	ENSPMRG00000021724	ENSPMRG00000021726	ENSPMRG00000021729 #33	ENSPMRG00000021733 #33
Argentine black and white tegu	MODERN SPECIES	106	ENSSMRG00000002608	ADAMTS10 (ENSSMRG00000000856)	ZAP70 (ENSSMRG00000000789)	ACTL9 (ENSSMRG00000000784)	ENSSMRG00000000723	ENSSMRG00000000700	ENSSMRG00000000683	FKBP8 (ENSSMRG00000000670)	KXD1 (ENSSMRG00000000652)	WDR18 (ENSSMRG00000000620)	GRIN3B (ENSSMRG00000000601)	TMEM259 (ENSSMRG00000000592)	NDUFA13 (ENSSMRG00000000580) #19	GATAD2A (ENSSMRG00000000536) #20	MAU2 (ENSSMRG00000000406) #21	SUGP1 (ENSSMRG00000000352) #22	TM6SF2 (ENSSMRG00000000324) #23	HAPLN4 (ENSSMRG00000000158) #24	NCAN (ENSSMRG00000000110) #25	NR2C2AP (ENSSMRG00000000094) #26	RFXANK (ENSSMRG00000000051) #27	BORCS8 (ENSSMRG00000000033) #28	ENSSMRG00000022975 #29	MEF2B (ENSSMRG00000022974) #30	TMEM161A (ENSSMRG00000022973) #31	SLC25A42 (ENSSMRG00000022972) #32	ARMC6 (ENSSMRG00000022971) #33	SUGP2 (ENSSMRG00000022970) #34	ENSSMRG00000022969 #35	HOMER3 (ENSSMRG00000022968) #36	DDX49 (ENSSMRG00000022967) #37
Toxicofera	ANCESTRAL SPECIES	31	ENSGT00940000158870	ENSGT00940000158404	ENSGT00940000159185	ENSGT00940000163012	ENSGT00440000039287.a.a	ENSGT00670000098179	ENSGT00950000185241.b	ENSGT00940000156705	ENSGT00530000064192	ENSGT00390000000289	ENSGT00940000161021	ENSGT00390000013329	ENSGT00390000000719 #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081.m.a #36	ENSGT00730000111231 #37
Lizard	MODERN SPECIES	423																ENSACAG00000008769 #22
Elapidae	ANCESTRAL SPECIES	3	ENSGT00940000158404	ENSGT00940000159185	ENSGT00940000163012.a	ENSGT00940000163012.b	ENSGT00440000039287.a.a	ENSGT00670000098179	ENSGT00950000185241.b	ENSGT00940000156705	ENSGT00530000064192	ENSGT00390000000289	ENSGT00940000161021	ENSGT00390000013329	ENSGT00390000000719.d #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081.m.a #36	ENSGT00730000111231.i.a #37
Indian cobra	MODERN SPECIES		ADAMTS10 (ENSNNAG00000000892)	ZAP70 (ENSNNAG00000000997)	ENSNNAG00000001047	ENSNNAG00000001061	ENSNNAG00000001070	ENSNNAG00000001099	ENSNNAG00000001115	FKBP8 (ENSNNAG00000001152)	KXD1 (ENSNNAG00000001270)	WDR18 (ENSNNAG00000001289)	GRIN3B (ENSNNAG00000001337)	TMEM259 (ENSNNAG00000001408)	NDUFA13 (ENSNNAG00000001445) #19	GATAD2A (ENSNNAG00000001467) #20	MAU2 (ENSNNAG00000001497) #21	SUGP1 (ENSNNAG00000001518) #22	TM6SF2 (ENSNNAG00000001539) #23	ENSNNAG00000001558	HAPLN4 (ENSNNAG00000001578) #24	NCAN (ENSNNAG00000001611) #25	NR2C2AP (ENSNNAG00000001682) #26	RFXANK (ENSNNAG00000001702) #27	BORCS8 (ENSNNAG00000001727) #28	ENSNNAG00000001734 #30	TMEM161A (ENSNNAG00000001750) #31	SLC25A42 (ENSNNAG00000001764) #32	ARMC6 (ENSNNAG00000001775) #33	SUGP2 (ENSNNAG00000001797) #34	ENSNNAG00000001830 #35	HOMER3 (ENSNNAG00000001848) #36	DDX49 (ENSNNAG00000001874) #37
Elapidae_a	ANCESTRAL SPECIES	10	ENSGT00940000158870	ENSGT00940000158404	ENSGT00940000159185	ENSGT00940000163012.a	ENSGT00940000163012.b	ENSGT00440000039287.a.a	ENSGT00670000098179	ENSGT00940000156705	ENSGT00530000064192	ENSGT00390000000289	ENSGT00940000161021	ENSGT00390000013329	ENSGT00390000000719.d #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00950000185950	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081.m.a #36
Acanthophiinae	ANCESTRAL SPECIES	13	ENSGT00940000159808	ENSGT00940000158870	ENSGT00940000158404	ENSGT00940000159185	ENSGT00940000163012.a	ENSGT00940000163012.b	ENSGT00670000098179	ENSGT00940000156705	ENSGT00530000064192	ENSGT00390000000289	ENSGT00940000161021	ENSGT00390000013329	ENSGT00390000000719.d #19	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081.m.a #36	ENSGT00730000111231.i.a #37
Mainland tiger snake	MODERN SPECIES	191						ENSNSUG00000017286	ENSNSUG00000017285	FKBP8 (ENSNSUG00000017284)	ENSNSUG00000017283	WDR18 (ENSNSUG00000017269)	GRIN3B (ENSNSUG00000017267)	TMEM259 (ENSNSUG00000017266)	ENSNSUG00000017264 #19	GATAD2A (ENSNSUG00000017263) #20	MAU2 (ENSNSUG00000017183) #21	SUGP1 (ENSNSUG00000017182) #22	TM6SF2 (ENSNSUG00000017181) #23	HAPLN4 (ENSNSUG00000017180) #24	ENSNSUG00000017179 #25	ENSNSUG00000017178 #25	NR2C2AP (ENSNSUG00000017177) #26	RFXANK (ENSNSUG00000017158) #27	BORCS8 (ENSNSUG00000017157) #28	ENSNSUG00000017155 #29	ENSNSUG00000017154 #30	TMEM161A (ENSNSUG00000017150) #31	SLC25A42 (ENSNSUG00000017149) #32	ARMC6 (ENSNSUG00000017148) #33	SUGP2 (ENSNSUG00000017147) #34	ENSNSUG00000017139 #35	HOMER3 (ENSNSUG00000017134) #36
Eastern brown snake	MODERN SPECIES	10	OAZ1 (ENSPTXG00000002197)	MYO1F (ENSPTXG00000002198)	ADAMTS10 (ENSPTXG00000002208)	ZAP70 (ENSPTXG00000002233)	ENSPTXG00000002235	ENSPTXG00000002236	ENSPTXG00000002239	ENSPTXG00000002240	FKBP8 (ENSPTXG00000002241)	WDR18 (ENSPTXG00000002244)	GRIN3B (ENSPTXG00000002248)	TMEM259 (ENSPTXG00000002329)	ENSPTXG00000002332 #19	GATAD2A (ENSPTXG00000002333) #20	MAU2 (ENSPTXG00000002334) #21	SUGP1 (ENSPTXG00000002335) #22	TM6SF2 (ENSPTXG00000002337) #23	ENSPTXG00000002338 #24	ENSPTXG00000002340 #25	ENSPTXG00000002343 #25	NR2C2AP (ENSPTXG00000002344) #26	RFXANK (ENSPTXG00000002349) #27	BORCS8 (ENSPTXG00000002351) #28	ENSPTXG00000002354	MEF2B (ENSPTXG00000002356) #30	TMEM161A (ENSPTXG00000002360) #31	SLC25A42 (ENSPTXG00000002364) #32	ARMC6 (ENSPTXG00000002367) #33	SUGP2 (ENSPTXG00000002368) #34	ENSPTXG00000002371 #35	ENSPTXG00000002373 #36
Blue-lipped sea krait	MODERN SPECIES	6554																ENSLLTG00000010653 #22
tuatara	MODERN SPECIES	1387	SLC5A5 (ENSSPUG00000007125)	CCDC124 (ENSSPUG00000007177)	KCNN1 (ENSSPUG00000007182)	ENSSPUG00000007197 #8	NR2F6 (ENSSPUG00000007214) #9	BABAM1 (ENSSPUG00000007222) #10	ABHD8 (ENSSPUG00000007232) #12	MRPL34 (ENSSPUG00000007265) #13	DDA1 (ENSSPUG00000007270) #14	GTPBP3 (ENSSPUG00000007326) #16	ENSSPUG00000007338	YJEFN3 (ENSSPUG00000007394) #18	NDUFA13 (ENSSPUG00000007419) #19	GATAD2A (ENSSPUG00000007455) #20	MAU2 (ENSSPUG00000007521) #21	SUGP1 (ENSSPUG00000007840) #22	TM6SF2 (ENSSPUG00000007875) #23	HAPLN4 (ENSSPUG00000007909) #24	NCAN (ENSSPUG00000007934) #25	NR2C2AP (ENSSPUG00000007984) #26	RFXANK (ENSSPUG00000007991) #27	BORCS8 (ENSSPUG00000008006) #28	ENSSPUG00000008012	ENSSPUG00000008020 #30	TMEM161A (ENSSPUG00000008031) #31	SLC25A42 (ENSSPUG00000008044) #32
Mammalia	ANCESTRAL SPECIES	39	ENSGT00390000016934 #10	ENSGT00510000049316 #11	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37
Platypus	MODERN SPECIES	84	BABAM1 (ENSOANG00000041344) #10	ENSOANG00000039006 #11	ABHD8 (ENSOANG00000014712) #12	ENSOANG00000050876	ENSOANG00000040368 #13	ENSOANG00000037822 #14	ANO8 (ENSOANG00000013731) #15	GTPBP3 (ENSOANG00000013734) #16	ENSOANG00000007382	CILP2 (ENSOANG00000046610) #17	YJEFN3 (ENSOANG00000051046) #18	ENSOANG00000045026 #19	ENSOANG00000011547	GATAD2A (ENSOANG00000006409) #20	ENSOANG00000012450 #21	SUGP1 (ENSOANG00000030496) #22	TM6SF2 (ENSOANG00000012176) #23	HAPLN4 (ENSOANG00000029891) #24	ENSOANG00000032130 #25	NR2C2AP (ENSOANG00000040380) #26	ENSOANG00000003658 #27	BORCS8 (ENSOANG00000043258) #28	ENSOANG00000046511 #29	MEF2B (ENSOANG00000010126) #30	TMEM161A (ENSOANG00000011575) #31	SLC25A42 (ENSOANG00000001030) #32	ARMC6 (ENSOANG00000045954) #33	SUGP2 (ENSOANG00000004574) #34	ENSOANG00000043871	ENSOANG00000004573 #35	ENSOANG00000044420 #37
Theria	ANCESTRAL SPECIES	31									ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000167763 #35	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478
Marsupialia	ANCESTRAL SPECIES	1	ENSGT01030000234635.a.a.a.b	ENSGT00940000162852.a	ENSGT00940000162117	ENSGT00390000003207	ENSGT00940000159972	ENSGT00940000162014.f	ENSGT00940000162014.e.b.a.a	ENSGT00940000162014.e.a.a	ENSGT00940000162014.e.a.b	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT01000000216439	ENSGT00500000044957	ENSGT00950000183104.B.a.a	ENSGT00390000004282	ENSGT00390000005318.a	ENSGT00940000161213	ENSGT00390000003420.b
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT01030000234635.a.a.a.b	ENSGT00940000162852.a	ENSGT00940000162117	ENSGT00390000003207	ENSGT00940000159972	ENSGT00940000162014.f.b.a	ENSGT00940000162014.e.b.a.a	ENSGT00940000162014.e.a.a	ENSGT00940000162014.e.a.b	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT01000000216439	ENSGT00500000044957	ENSGT00950000183104.B.a.a	ENSGT00390000004282	ENSGT00390000005318.a	ENSGT00940000161213	ENSGT00390000003420.b
Diprotodontia	ANCESTRAL SPECIES	20	ENSGT00940000158035	ENSGT01030000234635.a.a.a.b	ENSGT00940000162852.a	ENSGT00940000162117	ENSGT00390000003207	ENSGT00940000159972	ENSGT00940000162014.f.b.a	ENSGT00940000162014.e.b.a.a	ENSGT00940000162014.e.a.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT01000000216439	ENSGT00500000044957	ENSGT00950000183104.B.a.a	ENSGT00390000004282	ENSGT00390000005318.a	ENSGT00940000161213	ENSGT00390000003420.b
Diprotodontia_a	ANCESTRAL SPECIES	16	ENSGT00940000158035	ENSGT01030000234635.a.a.a.b	ENSGT00940000162852.a	ENSGT00940000162117	ENSGT00390000003207	ENSGT00940000159972	ENSGT00940000162014.f.b.a	ENSGT00940000162014.e.b.a.a	ENSGT00940000162014.e.a.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753.a #27	ENSGT00390000014856 #28	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT01000000216439	ENSGT00500000044957	ENSGT00950000183104.B.a.a	ENSGT00390000004282	ENSGT00390000005318.a	ENSGT00940000161213	ENSGT00390000003420.b
Common wonbat	MODERN SPECIES	580	ILVBL (ENSVURG00010024855)	SYDE1 (ENSVURG00010024852)	OR1I1 (ENSVURG00010024850)	CASP14 (ENSVURG00010024849)	ENSVURG00010024848	SLC1A6 (ENSVURG00010024846)	ENSVURG00010024843	ENSVURG00010024842	ENSVURG00010024841	ENSVURG00010024840	CILP2 (ENSVURG00010024838) #17	YJEFN3 (ENSVURG00010024837) #18	NDUFA13 (ENSVURG00010024836) #19	TSSK6 (ENSVURG00010024835)	GATAD2A (ENSVURG00010024834) #20	SUGP1 (ENSVURG00010024831) #22	TM6SF2 (ENSVURG00010024830) #23	HAPLN4 (ENSVURG00010024829) #24	ENSVURG00010024827 #25	ENSVURG00010024825 #26	RFXANK (ENSVURG00010024824) #27	BORCS8 (ENSVURG00010024823) #28	ENSVURG00010024799	ENSVURG00010024784	DOHH (ENSVURG00010024782)	FZR1 (ENSVURG00010024780)	TEKTIP1 (ENSVURG00010024778)	MFSD12 (ENSVURG00010024773)	HMG20B (ENSVURG00010024769)	GIPC3 (ENSVURG00010024764)	TBXA2R (ENSVURG00010024759)
koala	MODERN SPECIES	190	SYDE1 (ENSPCIG00000003261)	OR1I1 (ENSPCIG00000003241)	CASP14 (ENSPCIG00000003224)	ENSPCIG00000003213	CCDC105 (ENSPCIG00000003198)	SLC1A6 (ENSPCIG00000003178)	ENSPCIG00000011974	ENSPCIG00000031404	ENSPCIG00000032437	ENSPCIG00000027489	CILP2 (ENSPCIG00000024194) #17	YJEFN3 (ENSPCIG00000024192) #18	NDUFA13 (ENSPCIG00000024191) #19	GATAD2A (ENSPCIG00000024189) #20	MAU2 (ENSPCIG00000024186) #21	SUGP1 (ENSPCIG00000031015) #22	TM6SF2 (ENSPCIG00000024217) #23	HAPLN4 (ENSPCIG00000024218) #24	NCAN (ENSPCIG00000024219) #25	NR2C2AP (ENSPCIG00000024227) #26	ENSPCIG00000024222 #27	BORCS8 (ENSPCIG00000024230) #28	ENSPCIG00000024267	ENSPCIG00000025322	ENSPCIG00000033895	DOHH (ENSPCIG00000025326)	FZR1 (ENSPCIG00000025330)	ENSPCIG00000033355	MFSD12 (ENSPCIG00000025337)	HMG20B (ENSPCIG00000025343)	GIPC3 (ENSPCIG00000025355)
Wallaby	MODERN SPECIES	30															MAU2 (ENSMEUG00000013331) #21	SUGP1 (ENSMEUG00000013320) #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000027731	ENSSHAG00000026661	ENSSHAG00000029122	ENSSHAG00000021148	ENSSHAG00000026593	ENSSHAG00000025267	ENSSHAG00000020667	ENSSHAG00000024947	ENSSHAG00000004029	ENSSHAG00000022278 #17	ENSSHAG00000003518 #18	TSSK6 (ENSSHAG00000001334)	NDUFA13 (ENSSHAG00000031151) #19	GATAD2A (ENSSHAG00000013178) #20	MAU2 (ENSSHAG00000012602) #21	SUGP1 (ENSSHAG00000012361) #22	TM6SF2 (ENSSHAG00000012199) #23	HAPLN4 (ENSSHAG00000012102) #24	ENSSHAG00000011784 #25	ENSSHAG00000026063 #27	ENSSHAG00000031648 #28	ENSSHAG00000010759	ENSSHAG00000008822	DOHH (ENSSHAG00000008794)	FZR1 (ENSSHAG00000007954)	MFSD12 (ENSSHAG00000007626)	HMG20B (ENSSHAG00000007226)	TBXA2R (ENSSHAG00000006677)	ENSSHAG00000006050	PIP5K1C (ENSSHAG00000004499)	ENSSHAG00000027582
Opossum	MODERN SPECIES	2	ENSMODG00000046972	ENSMODG00000007347	ENSMODG00000023782	ENSMODG00000040491	ENSMODG00000046547	ENSMODG00000007250	ENSMODG00000023786	ENSMODG00000050615	ENSMODG00000007234	CILP2 (ENSMODG00000007229) #17	YJEFN3 (ENSMODG00000007212) #18	NDUFA13 (ENSMODG00000007201) #19	TSSK6 (ENSMODG00000023787)	GATAD2A (ENSMODG00000007189) #20	MAU2 (ENSMODG00000007162) #21	SUGP1 (ENSMODG00000007089) #22	TM6SF2 (ENSMODG00000007077) #23	HAPLN4 (ENSMODG00000007055) #24	ENSMODG00000028358 #25	NR2C2AP (ENSMODG00000047700) #26	RFXANK (ENSMODG00000007002) #27	BORCS8 (ENSMODG00000006986) #28	ENSMODG00000006976	NFIC (ENSMODG00000006935)	DOHH (ENSMODG00000006927)	FZR1 (ENSMODG00000006919)	ENSMODG00000047578	MFSD12 (ENSMODG00000006897)	HMG20B (ENSMODG00000006884)	ENSMODG00000006869	TBXA2R (ENSMODG00000006844)
Eutheria	ANCESTRAL SPECIES	24					ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Boreoeutheria	ANCESTRAL SPECIES	18				ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Laurasiatheria	ANCESTRAL SPECIES	15				ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Laurasiatheria_a	ANCESTRAL SPECIES	19				ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Artiodactyla	ANCESTRAL SPECIES	22						ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Suina	ANCESTRAL SPECIES	39	ENSGT00940000160338	ENSGT00940000162750	ENSGT00530000063632.B	ENSGT00960000186612.A.m.b	ENSGT00960000186612.A.m.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Pig	MODERN SPECIES	10	MGAT1 (ENSSSCG00000014538)	ENSSSCG00000033438	ENSSSCG00000043984	ENSSSCG00000038707	ENSSSCG00000061333	ATP13A1 (ENSSSCG00000013930)	GMIP (ENSSSCG00000013931)	LPAR2 (ENSSSCG00000013932)	PBX4 (ENSSSCG00000013933)	CILP2 (ENSSSCG00000013934) #17	YJEFN3 (ENSSSCG00000013935) #18	NDUFA13 (ENSSSCG00000056961) #19	TSSK6 (ENSSSCG00000013937)	GATAD2A (ENSSSCG00000013938) #20	MAU2 (ENSSSCG00000021664) #21	SUGP1 (ENSSSCG00000036970) #22	ENSSSCG00000048260	TM6SF2 (ENSSSCG00000059192) #23	HAPLN4 (ENSSSCG00000034887) #24	NCAN (ENSSSCG00000032131) #25	NR2C2AP (ENSSSCG00000023658) #26	RFXANK (ENSSSCG00000036310) #27	BORCS8 (ENSSSCG00000044084) #28	MEF2B (ENSSSCG00000030351) #30	TMEM161A (ENSSSCG00000033168) #31	SLC25A42 (ENSSSCG00000013927) #32	ENSSSCG00000044637	ARMC6 (ENSSSCG00000049430) #33	SUGP2 (ENSSSCG00000025839) #34	HOMER3 (ENSSSCG00000013919) #36	DDX49 (ENSSSCG00000025329) #37
Chacoan peccary	MODERN SPECIES	769	BTNL9 (ENSCWAG00000009419)	ZFP62 (ENSCWAG00000009392)	MGAT1 (ENSCWAG00000009379)	ENSCWAG00000009337	ENSCWAG00000009299	ATP13A1 (ENSCWAG00000009122)	GMIP (ENSCWAG00000009054)	LPAR2 (ENSCWAG00000009001)	PBX4 (ENSCWAG00000008974)	CILP2 (ENSCWAG00000008907) #17	YJEFN3 (ENSCWAG00000008846) #18	NDUFA13 (ENSCWAG00000008819) #19	TSSK6 (ENSCWAG00000008796)	GATAD2A (ENSCWAG00000008702) #20	MAU2 (ENSCWAG00000008506) #21	SUGP1 (ENSCWAG00000008452) #22	TM6SF2 (ENSCWAG00000008344) #23	HAPLN4 (ENSCWAG00000008277) #24	NCAN (ENSCWAG00000007920) #25	NR2C2AP (ENSCWAG00000007805) #26	RFXANK (ENSCWAG00000020046) #27	BORCS8 (ENSCWAG00000019997) #28	MEF2B (ENSCWAG00000019951) #30	TMEM161A (ENSCWAG00000019820) #31	SLC25A42 (ENSCWAG00000019779) #32	ARMC6 (ENSCWAG00000019757) #33	SUGP2 (ENSCWAG00000019735) #34	HOMER3 (ENSCWAG00000019671) #36	DDX49 (ENSCWAG00000019644) #37	COPE (ENSCWAG00000019578)	CERS1 (ENSCWAG00000019515)
Artiodactyla_a	ANCESTRAL SPECIES	23						ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Artiodactyla_b	ANCESTRAL SPECIES	23						ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000163783	ENSGT00950000183069.b	ENSGT00950000183216.d.a.a.b.a.a.a.b.b	ENSGT00950000183216.d.a.a.b.a.a.b.b.a.a	ENSGT00940000162084	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000154619.g.b.a.a	ENSGT00940000163146	ENSGT00940000162532	ENSGT00940000162241	ENSGT00940000163783	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Sperm whale	MODERN SPECIES	11	ZNF317 (ENSPCTG00005013391)	OR7G3 (ENSPCTG00005013334)	ENSPCTG00005013280	ENSPCTG00005013185	ENSPCTG00005013155	ENSPCTG00005013134	ATP13A1 (ENSPCTG00005013057)	GMIP (ENSPCTG00005012997)	LPAR2 (ENSPCTG00005012960)	ENSPCTG00005012928	ENSPCTG00005012911	CILP2 (ENSPCTG00005012782) #17	YJEFN3 (ENSPCTG00005012712) #18	NDUFA13 (ENSPCTG00005012668) #19	TSSK6 (ENSPCTG00005012651)	SUGP1 (ENSPCTG00005012419) #22	TM6SF2 (ENSPCTG00005012374) #23	HAPLN4 (ENSPCTG00005012308) #24	NCAN (ENSPCTG00005012150) #25	NR2C2AP (ENSPCTG00005012090) #26	RFXANK (ENSPCTG00005012057) #27	BORCS8 (ENSPCTG00005011972) #28	CRTC1 (ENSPCTG00005011514)	COMP (ENSPCTG00005011285)	KLHL26 (ENSPCTG00005011236)	ENSPCTG00005011193	PGPEP1 (ENSPCTG00005011099)	MAP1S (ENSPCTG00005011006)	UNC13A (ENSPCTG00005008632)	KCNN1 (ENSPCTG00005008359)	ENSPCTG00005008284
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.a.b	ENSGT00440000039287	ENSGT00940000163783	ENSGT00940000162532	ENSGT00940000162241	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719.g #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Dolphin	MODERN SPECIES	2460						ATP13A1 (ENSTTRG00000009893)	GMIP (ENSTTRG00000009891)	LPAR2 (ENSTTRG00000009889)	PBX4 (ENSTTRG00000009886)	CILP2 (ENSTTRG00000009884) #17	YJEFN3 (ENSTTRG00000009882) #18	NDUFA13 (ENSTTRG00000009880) #19	TSSK6 (ENSTTRG00000009879)	GATAD2A (ENSTTRG00000009875) #20	MAU2 (ENSTTRG00000009871) #21	SUGP1 (ENSTTRG00000009868) #22	TM6SF2 (ENSTTRG00000009863) #23	HAPLN4 (ENSTTRG00000009848) #24
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00440000039287	ENSGT00940000163783	ENSGT00940000162532	ENSGT00940000162241	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000018299.eb.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719.g #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00440000039287	ENSGT00940000163783	ENSGT00940000162532	ENSGT00940000162241	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000018299.eb.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719.g #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Narwhal	MODERN SPECIES	298	ZNF317 (ENSMMNG00015005671)	ENSMMNG00015005730	ENSMMNG00015005751	IFT20 (ENSMMNG00015005765)	ATP13A1 (ENSMMNG00015005783)	GMIP (ENSMMNG00015005835)	LPAR2 (ENSMMNG00015005899)	ENSMMNG00015005954	ENSMMNG00015006078	CILP2 (ENSMMNG00015006092) #17	YJEFN3 (ENSMMNG00015006128) #18	ENSMMNG00015006145 #19	TSSK6 (ENSMMNG00015006158)	GATAD2A (ENSMMNG00015006177) #20	MAU2 (ENSMMNG00015006228) #21	SUGP1 (ENSMMNG00015006270) #22	TM6SF2 (ENSMMNG00015006300) #23	HAPLN4 (ENSMMNG00015006325) #24	NCAN (ENSMMNG00015006441) #25	ENSMMNG00015006667 #26	RFXANK (ENSMMNG00015006700) #27	BORCS8 (ENSMMNG00015006726) #28	MEF2B (ENSMMNG00015006749) #30	TMEM161A (ENSMMNG00015006783) #31	SLC25A42 (ENSMMNG00015006831) #32	ARMC6 (ENSMMNG00015006856) #33	SUGP2 (ENSMMNG00015006879) #34	HOMER3 (ENSMMNG00015006915) #36	DDX49 (ENSMMNG00015006955) #37	COPE (ENSMMNG00015007007)	CERS1 (ENSMMNG00015007051)
Beluga whale	MODERN SPECIES	27	ZNF317 (ENSDLEG00000009793)	ENSDLEG00000009767	ENSDLEG00000009743	ENSDLEG00000009736	ATP13A1 (ENSDLEG00000009604)	GMIP (ENSDLEG00000009515)	LPAR2 (ENSDLEG00000009491)	ENSDLEG00000009478	ENSDLEG00000009459	CILP2 (ENSDLEG00000009413) #17	YJEFN3 (ENSDLEG00000009396) #18	ENSDLEG00000009372 #19	TSSK6 (ENSDLEG00000009362)	GATAD2A (ENSDLEG00000009307) #20	MAU2 (ENSDLEG00000009190) #21	SUGP1 (ENSDLEG00000009158) #22	TM6SF2 (ENSDLEG00000009148) #23	HAPLN4 (ENSDLEG00000006247) #24	NCAN (ENSDLEG00000006241) #25	ENSDLEG00000006238 #26	RFXANK (ENSDLEG00000006230) #27	ENSDLEG00000006226	MEF2B (ENSDLEG00000006219) #30	TMEM161A (ENSDLEG00000006213) #31	SLC25A42 (ENSDLEG00000006206) #32	ARMC6 (ENSDLEG00000006199) #33	SUGP2 (ENSDLEG00000006190) #34	HOMER3 (ENSDLEG00000006185) #36	DDX49 (ENSDLEG00000006176) #37	COPE (ENSDLEG00000006169)	CERS1 (ENSDLEG00000006163)
Vaquita	MODERN SPECIES	14	ZNF317 (ENSPSNG00000000646)	ENSPSNG00000000667	ENSPSNG00000000682	ENSPSNG00000000694	ENSPSNG00000000709	ATP13A1 (ENSPSNG00000000739)	GMIP (ENSPSNG00000000833)	LPAR2 (ENSPSNG00000000922)	ENSPSNG00000000937	ENSPSNG00000000965	CILP2 (ENSPSNG00000000993) #17	YJEFN3 (ENSPSNG00000001047) #18	TSSK6 (ENSPSNG00000001081)	GATAD2A (ENSPSNG00000001112) #20	MAU2 (ENSPSNG00000001203) #21	SUGP1 (ENSPSNG00000001311) #22	TM6SF2 (ENSPSNG00000001343) #23	HAPLN4 (ENSPSNG00000001367) #24	NCAN (ENSPSNG00000001532) #25	NR2C2AP (ENSPSNG00000001752) #26	RFXANK (ENSPSNG00000001779) #27	MEF2B (ENSPSNG00000001853) #30	TMEM161A (ENSPSNG00000001898) #31	SLC25A42 (ENSPSNG00000001921) #32	ARMC6 (ENSPSNG00000001939) #33	SUGP2 (ENSPSNG00000001966) #34	HOMER3 (ENSPSNG00000002016) #36	DDX49 (ENSPSNG00000002062) #37	COPE (ENSPSNG00000002124)	CERS1 (ENSPSNG00000002156)	GDF1 (ENSPSNG00000002175)
Blue whale	MODERN SPECIES	14	ENSBMSG00010002262	ENSBMSG00010002274	ENSBMSG00010002290	OR7C1 (ENSBMSG00010002299)	ENSBMSG00010002309	ATP13A1 (ENSBMSG00010002333)	GMIP (ENSBMSG00010002416)	LPAR2 (ENSBMSG00010002465)	ENSBMSG00010002474	ENSBMSG00010002498	CILP2 (ENSBMSG00010002559) #17	YJEFN3 (ENSBMSG00010002588) #18	TSSK6 (ENSBMSG00010002611)	GATAD2A (ENSBMSG00010002620) #20	MAU2 (ENSBMSG00010002666) #21	SUGP1 (ENSBMSG00010002719) #22	TM6SF2 (ENSBMSG00010002725) #23	HAPLN4 (ENSBMSG00010002737) #24	NCAN (ENSBMSG00010002745) #25	NR2C2AP (ENSBMSG00010002762) #26	RFXANK (ENSBMSG00010002771) #27	ENSBMSG00010002783	MEF2B (ENSBMSG00010003849) #30	TMEM161A (ENSBMSG00010003877) #31	SLC25A42 (ENSBMSG00010003900) #32	ARMC6 (ENSBMSG00010003914) #33	SUGP2 (ENSBMSG00010003931) #34	HOMER3 (ENSBMSG00010003958) #36	DDX49 (ENSBMSG00010004039) #37	COPE (ENSBMSG00010004064)	CERS1 (ENSBMSG00010004105)
Pecora	ANCESTRAL SPECIES		ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00730000111029.e.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Yarkand deer	MODERN SPECIES	32	SNAP47 (ENSCHYG00000010619)	JMJD4 (ENSCHYG00000010663)	ENSCHYG00000010707	ZNF354B (ENSCHYG00000010723)	ENSCHYG00000010766	ATP13A1 (ENSCHYG00000010816)	GMIP (ENSCHYG00000011272)	LPAR2 (ENSCHYG00000011542)	PBX4 (ENSCHYG00000011654)	CILP2 (ENSCHYG00000012104) #17	YJEFN3 (ENSCHYG00000012151) #18	NDUFA13 (ENSCHYG00000012188) #19	TSSK6 (ENSCHYG00000012255)	GATAD2A (ENSCHYG00000012277) #20	MAU2 (ENSCHYG00000012428) #21	SUGP1 (ENSCHYG00000012677) #22	TM6SF2 (ENSCHYG00000012851) #23	HAPLN4 (ENSCHYG00000012901) #24	NCAN (ENSCHYG00000012951) #25	NR2C2AP (ENSCHYG00000013015) #26	RFXANK (ENSCHYG00000013090) #27	BORCS8 (ENSCHYG00000013210) #28	MEF2B (ENSCHYG00000013347) #30	TMEM161A (ENSCHYG00000013806) #31	SLC25A42 (ENSCHYG00000014137) #32	ARMC6 (ENSCHYG00000014214) #33	SUGP2 (ENSCHYG00000014360) #34	ENSCHYG00000014561 #36	DDX49 (ENSCHYG00000015448) #37	CERS1 (ENSCHYG00000015529)	GDF1 (ENSCHYG00000015658)
Percora_a	ANCESTRAL SPECIES		ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00730000111029.e.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Bovidae	ANCESTRAL SPECIES		ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00730000111029.e.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Bovinae	ANCESTRAL SPECIES	34	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00730000111029.e.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Bos	ANCESTRAL SPECIES	34	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00730000111029.e.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Bos_a	ANCESTRAL SPECIES	29	ENSGT00940000160510	ENSGT00940000159618	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Domestic yak	MODERN SPECIES	27	PRSS38 (ENSBGRG00000002987)	SNAP47 (ENSBGRG00000002943)	JMJD4 (ENSBGRG00000002925)	ZNF354B (ENSBGRG00000002905)	ENSBGRG00000002896	ATP13A1 (ENSBGRG00000002465)	GMIP (ENSBGRG00000002278)	LPAR2 (ENSBGRG00000002227)	PBX4 (ENSBGRG00000002159)	CILP2 (ENSBGRG00000002130) #17	YJEFN3 (ENSBGRG00000002015) #18	TSSK6 (ENSBGRG00000001976)	GATAD2A (ENSBGRG00000001936) #20	ENSBGRG00000001911	MAU2 (ENSBGRG00000001879) #21	SUGP1 (ENSBGRG00000001817) #22	TM6SF2 (ENSBGRG00000001786) #23	HAPLN4 (ENSBGRG00000001768) #24	NCAN (ENSBGRG00000001688) #25	NR2C2AP (ENSBGRG00000001646) #26	RFXANK (ENSBGRG00000001549) #27	ENSBGRG00000001503 #28	MEF2B (ENSBGRG00000001435) #30	TMEM161A (ENSBGRG00000001322) #31	SLC25A42 (ENSBGRG00000001293) #32	ARMC6 (ENSBGRG00000001271) #33	SUGP2 (ENSBGRG00000001227) #34	ENSBGRG00000001213 #36	HOMER3 (ENSBGRG00000001163) #36	DDX49 (ENSBGRG00000001122) #37	COPE (ENSBGRG00000001045)
Wild yak	MODERN SPECIES	984																SUGP1 (ENSBMUG00000014735) #22	TM6SF2 (ENSBMUG00000014742) #23	ENSBMUG00000014766 #24	NCAN (ENSBMUG00000014781) #25	NR2C2AP (ENSBMUG00000014819) #26	RFXANK (ENSBMUG00000014864) #27	BORCS8 (ENSBMUG00000014902) #28	MEF2B (ENSBMUG00000014926) #30	TMEM161A (ENSBMUG00000014965) #31	SLC25A42 (ENSBMUG00000014988) #32	ARMC6 (ENSBMUG00000015012) #33	SUGP2 (ENSBMUG00000015048) #34	HOMER3 (ENSBMUG00000015101) #36	DDX49 (ENSBMUG00000015132) #37	COPE (ENSBMUG00000015145)	CERS1 (ENSBMUG00000015159)
Bos_b	ANCESTRAL SPECIES	36	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00730000111029.e.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Hybrid Bos Indicus	MODERN SPECIES	26	ENSBIXG00005011249	ENSBIXG00005001061	ENSBIXG00005011259	SNAP47 (ENSBIXG00005011285)	JMJD4 (ENSBIXG00005005916)	ENSBIXG00005000504	ZNF354B (ENSBIXG00005011307)	ENSBIXG00005011324	ATP13A1 (ENSBIXG00005011383)	GMIP (ENSBIXG00005011455)	LPAR2 (ENSBIXG00005011498)	PBX4 (ENSBIXG00005011533)	CILP2 (ENSBIXG00005011569) #17	GATAD2A (ENSBIXG00005011721) #20	MAU2 (ENSBIXG00005011825) #21	SUGP1 (ENSBIXG00005011882) #22	TM6SF2 (ENSBIXG00005011902) #23	HAPLN4 (ENSBIXG00005006424) #24	NCAN (ENSBIXG00005011939) #25	NR2C2AP (ENSBIXG00005011976) #26	RFXANK (ENSBIXG00005012032) #27	BORCS8 (ENSBIXG00005012065) #28	MEF2B (ENSBIXG00005012139) #30	TMEM161A (ENSBIXG00005007436) #31	SLC25A42 (ENSBIXG00005012191) #32	ARMC6 (ENSBIXG00005012220) #33	SUGP2 (ENSBIXG00005001278) #34	HOMER3 (ENSBIXG00005000373) #36	DDX49 (ENSBIXG00005012358) #37	COPE (ENSBIXG00005012672)	UPF1 (ENSBIXG00005012808)
Cow	MODERN SPECIES	26	PRSS38 (ENSBTAG00000013977)	SNAP47 (ENSBTAG00000004188)	JMJD4 (ENSBTAG00000004191)	ZNF354B (ENSBTAG00000017123)	ENSBTAG00000052161	ATP13A1 (ENSBTAG00000007128)	GMIP (ENSBTAG00000015144)	LPAR2 (ENSBTAG00000004652)	PBX4 (ENSBTAG00000009975)	CILP2 (ENSBTAG00000014969) #17	YJEFN3 (ENSBTAG00000014968) #18	NDUFA13 (ENSBTAG00000007812) #19	TSSK6 (ENSBTAG00000006649)	GATAD2A (ENSBTAG00000003034) #20	MAU2 (ENSBTAG00000006124) #21	SUGP1 (ENSBTAG00000006116) #22	TM6SF2 (ENSBTAG00000016042) #23	HAPLN4 (ENSBTAG00000001765) #24	NCAN (ENSBTAG00000001764) #25	NR2C2AP (ENSBTAG00000001763) #26	RFXANK (ENSBTAG00000001762) #27	BORCS8 (ENSBTAG00000025817) #28	MEF2B (ENSBTAG00000001818) #30	TMEM161A (ENSBTAG00000001817) #31	SLC25A42 (ENSBTAG00000001816) #32	ARMC6 (ENSBTAG00000013291) #33	SUGP2 (ENSBTAG00000013288) #34	HOMER3 (ENSBTAG00000000813) #36	DDX49 (ENSBTAG00000000811) #37	COPE (ENSBTAG00000000810)	CERS1 (ENSBTAG00000037729)
American bison	MODERN SPECIES	3165	PRSS38 (ENSBBBG00000016108)	SNAP47 (ENSBBBG00000007139)	JMJD4 (ENSBBBG00000016083)	ZNF354B (ENSBBBG00000016063)	ENSBBBG00000016056	ATP13A1 (ENSBBBG00000003990)	GMIP (ENSBBBG00000016022)	LPAR2 (ENSBBBG00000015996)	PBX4 (ENSBBBG00000015984)	CILP2 (ENSBBBG00000015975) #17	YJEFN3 (ENSBBBG00000015957) #18	NDUFA13 (ENSBBBG00000015950) #19	TSSK6 (ENSBBBG00000015942)	GATAD2A (ENSBBBG00000015939) #20	MAU2 (ENSBBBG00000003961) #21	SUGP1 (ENSBBBG00000015892) #22	TM6SF2 (ENSBBBG00000015869) #23	HAPLN4 (ENSBBBG00000015855) #24	NCAN (ENSBBBG00000003940) #25	NR2C2AP (ENSBBBG00000003931) #26	RFXANK (ENSBBBG00000015745) #27	ENSBBBG00000015701 #28	MEF2B (ENSBBBG00000007138) #30	TMEM161A (ENSBBBG00000007455) #31	ARMC6 (ENSBBBG00000015629) #33	SUGP2 (ENSBBBG00000003426) #34	ENSBBBG00000003456 #36	ENSBBBG00000003467 #36	DDX49 (ENSBBBG00000015616) #37	COPE (ENSBBBG00000015595)	CERS1 (ENSBBBG00000015545)
Caprinae	ANCESTRAL SPECIES	32	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570	ENSGT00730000111029.e.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Rambouillet Sheep	MODERN SPECIES	21	ENSOARG00020018666	WNT9A (ENSOARG00020018708)	PRSS38 (ENSOARG00020018766)	SNAP47 (ENSOARG00020018819)	ZNF354B (ENSOARG00020018905)	ENSOARG00020018960	ATP13A1 (ENSOARG00020019002)	GMIP (ENSOARG00020019185)	LPAR2 (ENSOARG00020019376)	CILP2 (ENSOARG00020019527) #17	YJEFN3 (ENSOARG00020019633) #18	NDUFA13 (ENSOARG00020019709) #19	TSSK6 (ENSOARG00020019749)	GATAD2A (ENSOARG00020019767) #20	MAU2 (ENSOARG00020019838) #21	SUGP1 (ENSOARG00020019993) #22	TM6SF2 (ENSOARG00020020089) #23	HAPLN4 (ENSOARG00020020166) #24	NR2C2AP (ENSOARG00020020240) #26	RFXANK (ENSOARG00020020308) #27	BORCS8 (ENSOARG00020020354) #28	MEF2B (ENSOARG00020020398) #30	TMEM161A (ENSOARG00020020857) #31	SLC25A42 (ENSOARG00020020909) #32	ARMC6 (ENSOARG00020020947) #33	SUGP2 (ENSOARG00020021040) #34	ENSOARG00020021129 #36	DDX49 (ENSOARG00020021548) #37	CERS1 (ENSOARG00020021615)	UPF1 (ENSOARG00020003352)	COMP (ENSOARG00020003569)
Goat	MODERN SPECIES	26	ENSCHIG00000004906	SNAP47 (ENSCHIG00000025042)	JMJD4 (ENSCHIG00000001908)	ZNF354B (ENSCHIG00000024384)	ENSCHIG00000027175	ATP13A1 (ENSCHIG00000027146)	GMIP (ENSCHIG00000006935)	LPAR2 (ENSCHIG00000026267)	PBX4 (ENSCHIG00000020490)	CILP2 (ENSCHIG00000016599) #17	YJEFN3 (ENSCHIG00000022695) #18	NDUFA13 (ENSCHIG00000005106) #19	TSSK6 (ENSCHIG00000012857)	GATAD2A (ENSCHIG00000022449) #20	MAU2 (ENSCHIG00000018574) #21	SUGP1 (ENSCHIG00000024169) #22	TM6SF2 (ENSCHIG00000009497) #23	HAPLN4 (ENSCHIG00000017398) #24	NCAN (ENSCHIG00000023523) #25	NR2C2AP (ENSCHIG00000026754) #26	RFXANK (ENSCHIG00000009697) #27	BORCS8 (ENSCHIG00000023514) #28	MEF2B (ENSCHIG00000009022) #30	TMEM161A (ENSCHIG00000015703) #31	SLC25A42 (ENSCHIG00000017224) #32	ARMC6 (ENSCHIG00000022745) #33	SUGP2 (ENSCHIG00000000571) #34	HOMER3 (ENSCHIG00000013425) #36	DDX49 (ENSCHIG00000019910) #37	COPE (ENSCHIG00000019197)	CERS1 (ENSCHIG00000021209)
Siberian musk deer	MODERN SPECIES	1231					ATP13A1 (ENSMMSG00000018140)	GMIP (ENSMMSG00000018067)	LPAR2 (ENSMMSG00000018021)	PBX4 (ENSMMSG00000017955)	CILP2 (ENSMMSG00000017925) #17	YJEFN3 (ENSMMSG00000017864) #18	ENSMMSG00000017802 #19	TSSK6 (ENSMMSG00000017779)	ENSMMSG00000017748	GATAD2A (ENSMMSG00000017683) #20	MAU2 (ENSMMSG00000017598) #21	SUGP1 (ENSMMSG00000017541) #22	TM6SF2 (ENSMMSG00000017487) #23	HAPLN4 (ENSMMSG00000017463) #24	NCAN (ENSMMSG00000017015) #25	NR2C2AP (ENSMMSG00000016963) #26	RFXANK (ENSMMSG00000016859) #27	BORCS8 (ENSMMSG00000016823) #28	MEF2B (ENSMMSG00000016211) #30	TMEM161A (ENSMMSG00000016113) #31	SLC25A42 (ENSMMSG00000022673) #32	ARMC6 (ENSMMSG00000022659) #33	SUGP2 (ENSMMSG00000022643) #34	HOMER3 (ENSMMSG00000022598) #36	DDX49 (ENSMMSG00000022565) #37	COPE (ENSMMSG00000022538)	CERS1 (ENSMMSG00000022516)
Camelidae	ANCESTRAL SPECIES	64							ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643.a	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Arabian camel	MODERN SPECIES	14	GABRG2 (ENSCDRG00005009620)	GABRA1 (ENSCDRG00005010066)	GABRA6 (ENSCDRG00005010202)	GABRB2 (ENSCDRG00005010424)	ENSCDRG00005010558	ATP10B (ENSCDRG00005010580)	ATP13A1 (ENSCDRG00005011036)	GMIP (ENSCDRG00005011233)	LPAR2 (ENSCDRG00005011318)	PBX4 (ENSCDRG00005011358)	CILP2 (ENSCDRG00005011464) #17	YJEFN3 (ENSCDRG00005011508) #18	TSSK6 (ENSCDRG00005011623)	GATAD2A (ENSCDRG00005011647) #20	MAU2 (ENSCDRG00005011821) #21	SUGP1 (ENSCDRG00005011946) #22	TM6SF2 (ENSCDRG00005012037) #23	HAPLN4 (ENSCDRG00005012163) #24	NCAN (ENSCDRG00005012212) #25	NR2C2AP (ENSCDRG00005012299) #26	RFXANK (ENSCDRG00005012616) #27	ENSCDRG00005012691 #28	MEF2B (ENSCDRG00005012755) #30	TMEM161A (ENSCDRG00005012779) #31	SLC25A42 (ENSCDRG00005012927) #32	ARMC6 (ENSCDRG00005012979) #33	SUGP2 (ENSCDRG00005013031) #34	HOMER3 (ENSCDRG00005013258) #36	DDX49 (ENSCDRG00005013373) #37	COPE (ENSCDRG00005013441)	CERS1 (ENSCDRG00005013600)
Alpaca	MODERN SPECIES	2871																SUGP1 (ENSVPAG00000002122) #22	ENSVPAG00000002121 #23	NCAN (ENSVPAG00000002120) #25
Laurasiatheria_b	ANCESTRAL SPECIES	18				ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Carnivora	ANCESTRAL SPECIES	6	ENSGT00940000156463	ENSGT00390000001296	ENSGT00940000153104.e.a.a.b	ENSGT00940000163095.b	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Felidae	ANCESTRAL SPECIES	17	ENSGT00390000012690	ENSGT00940000156463	ENSGT00390000001296	ENSGT00950000182890.D.d.c	ENSGT00940000163095.b	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Panthera	ANCESTRAL SPECIES	1	ENSGT00390000012690	ENSGT00940000156463.e	ENSGT00390000001296	ENSGT00950000182890.D.d.c	ENSGT00940000163095.b	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Panthera_a	ANCESTRAL SPECIES		ENSGT00390000012690	ENSGT00940000156463.e	ENSGT00390000001296	ENSGT00950000182890.D.d.c	ENSGT00940000163095.b	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
lion	MODERN SPECIES	2	TMEM42 (ENSPLOG00000001938)	KIF15 (ENSPLOG00000001861)	KIAA1143 (ENSPLOG00000001819)	ENSPLOG00000001812	ZNF502 (ENSPLOG00000001805)	ATP13A1 (ENSPLOG00000001767)	GMIP (ENSPLOG00000001614)	LPAR2 (ENSPLOG00000001569)	PBX4 (ENSPLOG00000001560)	CILP2 (ENSPLOG00000001532) #17	YJEFN3 (ENSPLOG00000001517) #18	NDUFA13 (ENSPLOG00000001502) #19	TSSK6 (ENSPLOG00000001493)	GATAD2A (ENSPLOG00000001463) #20	MAU2 (ENSPLOG00000001424) #21	SUGP1 (ENSPLOG00000001334) #22	TM6SF2 (ENSPLOG00000001308) #23	HAPLN4 (ENSPLOG00000001286) #24	NCAN (ENSPLOG00000001120) #25	ENSPLOG00000000980 #26	RFXANK (ENSPLOG00000000919) #27	BORCS8 (ENSPLOG00000000887) #28	MEF2B (ENSPLOG00000000863) #30	TMEM161A (ENSPLOG00000000833) #31	SLC25A42 (ENSPLOG00000000808) #32	ARMC6 (ENSPLOG00000000792) #33	SUGP2 (ENSPLOG00000000772) #34	HOMER3 (ENSPLOG00000000722) #36	DDX49 (ENSPLOG00000000667) #37	COPE (ENSPLOG00000000628)	CERS1 (ENSPLOG00000000599)
leopard	MODERN SPECIES	68	KIF15 (ENSPPRG00000010780)	KIAA1143 (ENSPPRG00000011059)	ENSPPRG00000015943	ZNF502 (ENSPPRG00000011352)	ENSPPRG00000011672	ATP13A1 (ENSPPRG00000014180)	GMIP (ENSPPRG00000016893)	LPAR2 (ENSPPRG00000018123)	PBX4 (ENSPPRG00000020424)	CILP2 (ENSPPRG00000023737) #17	YJEFN3 (ENSPPRG00000023619) #18	NDUFA13 (ENSPPRG00000022807) #19	TSSK6 (ENSPPRG00000016235)	GATAD2A (ENSPPRG00000000270) #20	MAU2 (ENSPPRG00000000643) #21	SUGP1 (ENSPPRG00000000880) #22	TM6SF2 (ENSPPRG00000001208) #23	HAPLN4 (ENSPPRG00000001581) #24	NR2C2AP (ENSPPRG00000003111) #26	RFXANK (ENSPPRG00000004266) #27	BORCS8 (ENSPPRG00000004580) #28	MEF2B (ENSPPRG00000006317) #30	TMEM161A (ENSPPRG00000008638) #31	SLC25A42 (ENSPPRG00000008936) #32	ARMC6 (ENSPPRG00000009582) #33	SUGP2 (ENSPPRG00000010924) #34	HOMER3 (ENSPPRG00000013004) #36	DDX49 (ENSPPRG00000013274) #37	COPE (ENSPPRG00000019668)	CERS1 (ENSPPRG00000021419)	GDF1 (ENSPPRG00000024438)
Tiger	MODERN SPECIES	281	TMEM42 (ENSPTIG00000013807)	ENSPTIG00000013744	ENSPTIG00000013732	KIAA1143 (ENSPTIG00000013723)	ENSPTIG00000006544	ZNF502 (ENSPTIG00000013634)	GMIP (ENSPTIG00000013444)	LPAR2 (ENSPTIG00000013412)	PBX4 (ENSPTIG00000013405)	CILP2 (ENSPTIG00000013349) #17	YJEFN3 (ENSPTIG00000013321) #18	NDUFA13 (ENSPTIG00000013303) #19	TSSK6 (ENSPTIG00000006514)	GATAD2A (ENSPTIG00000013272) #20	MAU2 (ENSPTIG00000013179) #21	SUGP1 (ENSPTIG00000013061) #22	TM6SF2 (ENSPTIG00000013026) #23	HAPLN4 (ENSPTIG00000013017) #24	NR2C2AP (ENSPTIG00000012962) #26	RFXANK (ENSPTIG00000012655) #27	BORCS8 (ENSPTIG00000012610) #28	MEF2B (ENSPTIG00000012475) #30	TMEM161A (ENSPTIG00000012395) #31	SLC25A42 (ENSPTIG00000012354) #32	ARMC6 (ENSPTIG00000012073) #33	SUGP2 (ENSPTIG00000012003) #34	HOMER3 (ENSPTIG00000011533) #36	DDX49 (ENSPTIG00000011259) #37	COPE (ENSPTIG00000010957)	CERS1 (ENSPTIG00000010849)	GDF1 (ENSPTIG00000010670)
Cat	MODERN SPECIES	1	TMEM42 (ENSFCAG00000007645)	KIF15 (ENSFCAG00000007640)	KIAA1143 (ENSFCAG00000007638)	ENSFCAG00000042601	ZNF502 (ENSFCAG00000024223)	ATP13A1 (ENSFCAG00000014541)	GMIP (ENSFCAG00000014540)	LPAR2 (ENSFCAG00000014538)	PBX4 (ENSFCAG00000014536)	CILP2 (ENSFCAG00000014331) #17	YJEFN3 (ENSFCAG00000014330) #18	NDUFA13 (ENSFCAG00000014329) #19	TSSK6 (ENSFCAG00000014328)	GATAD2A (ENSFCAG00000014327) #20	MAU2 (ENSFCAG00000009780) #21	SUGP1 (ENSFCAG00000009779) #22	HAPLN4 (ENSFCAG00000022898) #24	NCAN (ENSFCAG00000008376) #25	NR2C2AP (ENSFCAG00000009777) #26	RFXANK (ENSFCAG00000009775) #27	BORCS8 (ENSFCAG00000047348) #28	MEF2B (ENSFCAG00000009774) #30	TMEM161A (ENSFCAG00000009771) #31	SLC25A42 (ENSFCAG00000009770) #32	ARMC6 (ENSFCAG00000009767) #33	SUGP2 (ENSFCAG00000009765) #34	HOMER3 (ENSFCAG00000009762) #36	DDX49 (ENSFCAG00000009760) #37	CERS1 (ENSFCAG00000023920)	UPF1 (ENSFCAG00000009757)	COMP (ENSFCAG00000009754)
Caniformia	ANCESTRAL SPECIES	4	ENSGT00940000156463	ENSGT00390000001296	ENSGT00940000153104.e.a.a.b	ENSGT00940000163095.b	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Canidae	ANCESTRAL SPECIES		ENSGT00940000156463	ENSGT00390000001296	ENSGT00950000182890.D.d.c.d	ENSGT00940000163095.b	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478.b	ENSGT01030000234515.b
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00940000156463	ENSGT00390000001296	ENSGT00950000182890.D.d.c.d	ENSGT00940000163095.b	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00960000189525	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478.b	ENSGT01030000234515.b
Dingo	MODERN SPECIES	112	TMEM42 (ENSCAFG00020013305)	KIF15 (ENSCAFG00020013252)	KIAA1143 (ENSCAFG00020013246)	ZNF502 (ENSCAFG00020013240)	ATP13A1 (ENSCAFG00020012802)	GMIP (ENSCAFG00020012761)	LPAR2 (ENSCAFG00020012758)	PBX4 (ENSCAFG00020012739)	CILP2 (ENSCAFG00020012728) #17	YJEFN3 (ENSCAFG00020012724) #18	ENSCAFG00020012723	NDUFA13 (ENSCAFG00020012721) #19	TSSK6 (ENSCAFG00020012717)	GATAD2A (ENSCAFG00020012715) #20	MAU2 (ENSCAFG00020012543) #21	SUGP1 (ENSCAFG00020012508) #22	TM6SF2 (ENSCAFG00020012504) #23	HAPLN4 (ENSCAFG00020012500) #24	NCAN (ENSCAFG00020012454) #25	NR2C2AP (ENSCAFG00020012443) #26	RFXANK (ENSCAFG00020012437) #27	BORCS8 (ENSCAFG00020012435) #28	MEF2B (ENSCAFG00020012425) #30	TMEM161A (ENSCAFG00020012412) #31	SLC25A42 (ENSCAFG00020012408) #32	ARMC6 (ENSCAFG00020012404) #33	SUGP2 (ENSCAFG00020012392) #34	HOMER3 (ENSCAFG00020012389) #36	DDX49 (ENSCAFG00020012375) #37	COPE (ENSCAFG00020012363)	CERS1 (ENSCAFG00020012351)
Dog	MODERN SPECIES	12	ENSCAFG00845013403	KIF15 (ENSCAFG00845013570)	KIAA1143 (ENSCAFG00845013959)	ENSCAFG00845013976	ENSCAFG00845014000	ATP13A1 (ENSCAFG00845014060)	GMIP (ENSCAFG00845014134)	LPAR2 (ENSCAFG00845014191)	PBX4 (ENSCAFG00845014230)	CILP2 (ENSCAFG00845014273) #17	YJEFN3 (ENSCAFG00845014306) #18	NDUFA13 (ENSCAFG00845014336) #19	TSSK6 (ENSCAFG00845014349)	GATAD2A (ENSCAFG00845014383) #20	MAU2 (ENSCAFG00845014470) #21	SUGP1 (ENSCAFG00845014514) #22	TM6SF2 (ENSCAFG00845014561) #23	HAPLN4 (ENSCAFG00845014588) #24	NCAN (ENSCAFG00845014625) #25	RFXANK (ENSCAFG00845014775) #27	NR2C2AP (ENSCAFG00845018085) #26	BORCS8 (ENSCAFG00845018185) #28	MEF2B (ENSCAFG00845018253) #30	TMEM161A (ENSCAFG00845018423) #31	SLC25A42 (ENSCAFG00845018653) #32	ARMC6 (ENSCAFG00845018765) #33	SUGP2 (ENSCAFG00845018888) #34	HOMER3 (ENSCAFG00845019115) #36	DDX49 (ENSCAFG00845019266) #37	COPE (ENSCAFG00845019400)	CERS1 (ENSCAFG00845019662)
Red fox	MODERN SPECIES	5	TMEM42 (ENSVVUG00000007057)	KIF15 (ENSVVUG00000007077)	KIAA1143 (ENSVVUG00000007169)	ENSVVUG00000007176	ZNF502 (ENSVVUG00000007182)	ATP13A1 (ENSVVUG00000007184)	GMIP (ENSVVUG00000007227)	LPAR2 (ENSVVUG00000007473)	PBX4 (ENSVVUG00000007478)	CILP2 (ENSVVUG00000007489) #17	YJEFN3 (ENSVVUG00000007502) #18	NDUFA13 (ENSVVUG00000007513) #19	TSSK6 (ENSVVUG00000007516)	GATAD2A (ENSVVUG00000007522) #20	MAU2 (ENSVVUG00000007527) #21	SUGP1 (ENSVVUG00000007569) #22	TM6SF2 (ENSVVUG00000007584) #23	HAPLN4 (ENSVVUG00000007594) #24	NCAN (ENSVVUG00000007597) #25	NR2C2AP (ENSVVUG00000007609) #26	RFXANK (ENSVVUG00000007633) #27	BORCS8 (ENSVVUG00000007667) #28	MEF2B (ENSVVUG00000007672) #30	TMEM161A (ENSVVUG00000007683) #31	SLC25A42 (ENSVVUG00000007728) #32	ARMC6 (ENSVVUG00000007731) #33	SUGP2 (ENSVVUG00000007744) #34	HOMER3 (ENSVVUG00000007758) #36	DDX49 (ENSVVUG00000007767) #37	ENSVVUG00000007777	CERS1 (ENSVVUG00000007783)
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00390000012690	ENSGT00940000156463	ENSGT00390000001296	ENSGT00940000153104.e.a.a.b	ENSGT00940000163095.b	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Mustelinae	ANCESTRAL SPECIES	10	ENSGT00390000012690	ENSGT00940000156463	ENSGT00390000001296	ENSGT00940000153104.e.a.a.b	ENSGT00940000163095.b	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
American mink	MODERN SPECIES	58	ENSNVIG00000021055	KIF15 (ENSNVIG00000021010)	K1143 (ENSNVIG00000020998)	ZNF501 (ENSNVIG00000020994)	ZNF502 (ENSNVIG00000020983)	ATP13A1 (ENSNVIG00000020944)	GMIP (ENSNVIG00000020899)	LPAR2 (ENSNVIG00000020878)	PBX4 (ENSNVIG00000020863)	CILP2 (ENSNVIG00000020847) #17	YJEFN3 (ENSNVIG00000020838) #18	NDUFA13 (ENSNVIG00000020832) #19	TSSK6 (ENSNVIG00000020829)	GATAD2A (ENSNVIG00000020782) #20	MAU2 (ENSNVIG00000020762) #21	SUGP1 (ENSNVIG00000020747) #22	TM6SF2 (ENSNVIG00000020733) #23	HAPLN4 (ENSNVIG00000020713) #24	NCAN (ENSNVIG00000020377) #25	NR2CA (ENSNVIG00000020303) #26	RFXANK (ENSNVIG00000020264) #27	BORCS8 (ENSNVIG00000020221) #28	MEF2B (ENSNVIG00000020206) #30	TMEM161A (ENSNVIG00000020180) #31	S2542 (ENSNVIG00000020166) #32	ARMC6 (ENSNVIG00000020143) #33	SUGP2 (ENSNVIG00000020116) #34	HOMER3 (ENSNVIG00000020032) #36	DDX49 (ENSNVIG00000020003) #37	COPE (ENSNVIG00000019958)	CERS1 (ENSNVIG00000019939)
Ferret	MODERN SPECIES	238	EXOSC7 (ENSMPUG00000015336)	ZDHHC3 (ENSMPUG00000015337)	TMEM42 (ENSMPUG00000015339)	KIF15 (ENSMPUG00000015344)	KIAA1143 (ENSMPUG00000015348)	ZNF502 (ENSMPUG00000015349)	ATP13A1 (ENSMPUG00000015350)	GMIP (ENSMPUG00000015351)	LPAR2 (ENSMPUG00000015364)	PBX4 (ENSMPUG00000015365)	CILP2 (ENSMPUG00000015383) #17	YJEFN3 (ENSMPUG00000015390) #18	TSSK6 (ENSMPUG00000019662)	GATAD2A (ENSMPUG00000015399) #20	MAU2 (ENSMPUG00000015402) #21	SUGP1 (ENSMPUG00000015404) #22	TM6SF2 (ENSMPUG00000015407) #23	HAPLN4 (ENSMPUG00000015424) #24	NCAN (ENSMPUG00000015433) #25	NR2C2AP (ENSMPUG00000015462) #26	RFXANK (ENSMPUG00000015469) #27	BORCS8 (ENSMPUG00000015471) #28	MEF2B (ENSMPUG00000015473) #30	TMEM161A (ENSMPUG00000015475) #31	SLC25A42 (ENSMPUG00000015477) #32	SUGP2 (ENSMPUG00000015478) #34	HOMER3 (ENSMPUG00000015484) #36	DDX49 (ENSMPUG00000015485) #37	COPE (ENSMPUG00000015486)	CERS1 (ENSMPUG00000015497)	GDF1 (ENSMPUG00000015514)
Ursidae	ANCESTRAL SPECIES	11	ENSGT00390000012690	ENSGT00940000156463	ENSGT00390000001296	ENSGT00940000153104.e.a.a.b	ENSGT00940000163095.b	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Giant Panda	MODERN SPECIES	14	TMEM42 (ENSAMEG00000012098)	KIF15 (ENSAMEG00000012038)	KIAA1143 (ENSAMEG00000012027)	ENSAMEG00000019371	ENSAMEG00000012026	ENSAMEG00000011962	GMIP (ENSAMEG00000011931)	LPAR2 (ENSAMEG00000024299)	PBX4 (ENSAMEG00000011909)	CILP2 (ENSAMEG00000011906) #17	YJEFN3 (ENSAMEG00000030667) #18	NDUFA13 (ENSAMEG00000011893) #19	TSSK6 (ENSAMEG00000019351)	GATAD2A (ENSAMEG00000011882) #20	MAU2 (ENSAMEG00000011868) #21	SUGP1 (ENSAMEG00000011838) #22	TM6SF2 (ENSAMEG00000011811) #23	HAPLN4 (ENSAMEG00000027731) #24	NCAN (ENSAMEG00000011734) #25	NR2C2AP (ENSAMEG00000011727) #26	RFXANK (ENSAMEG00000011703) #27	BORCS8 (ENSAMEG00000011698) #28	MEF2B (ENSAMEG00000011682) #30	TMEM161A (ENSAMEG00000011655) #31	SLC25A42 (ENSAMEG00000027218) #32	ARMC6 (ENSAMEG00000011621) #33	SUGP2 (ENSAMEG00000011613) #34	HOMER3 (ENSAMEG00000011595) #36	DDX49 (ENSAMEG00000011566) #37	COPE (ENSAMEG00000011524)	CERS1 (ENSAMEG00000011517)
Ursus	ANCESTRAL SPECIES	5	ENSGT00390000012690	ENSGT00940000156463	ENSGT00390000001296	ENSGT00940000153104.e.a.a.b	ENSGT00940000163095.b	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Polar bear	MODERN SPECIES	255	ENSUMAG00000005734	TMEM42 (ENSUMAG00000005738)	KIF15 (ENSUMAG00000005764)	KIAA1143 (ENSUMAG00000005959)	ZNF501 (ENSUMAG00000005963)	ZNF502 (ENSUMAG00000005965)	ATP13A1 (ENSUMAG00000005989)	GMIP (ENSUMAG00000006087)	LPAR2 (ENSUMAG00000006117)	PBX4 (ENSUMAG00000006125)	ENSUMAG00000006179 #18	NDUFA13 (ENSUMAG00000006183) #19	TSSK6 (ENSUMAG00000006185)	GATAD2A (ENSUMAG00000006192) #20	MAU2 (ENSUMAG00000006229) #21	SUGP1 (ENSUMAG00000006358) #22	TM6SF2 (ENSUMAG00000006368) #23	NCAN (ENSUMAG00000006378) #25	NR2C2AP (ENSUMAG00000006411) #26	RFXANK (ENSUMAG00000006419) #27	BORCS8 (ENSUMAG00000006425) #28	MEF2B (ENSUMAG00000006437) #30	TMEM161A (ENSUMAG00000006455) #31	SLC25A42 (ENSUMAG00000006458) #32	ARMC6 (ENSUMAG00000006462) #33	SUGP2 (ENSUMAG00000006467) #34	HOMER3 (ENSUMAG00000006477) #36	DDX49 (ENSUMAG00000006489) #37	COPE (ENSUMAG00000006505)	UPF1 (ENSUMAG00000006652)	COMP (ENSUMAG00000007436)
American black bear	DUPLICATION
American black bear	MODERN SPECIES		ENSUAMG00000001974	ENSUAMG00000001965	TMEM42 (ENSUAMG00000001960)	KIF15 (ENSUAMG00000001916)	KIAA1143 (ENSUAMG00000001910)	ZNF501 (ENSUAMG00000001908)	ZNF502 (ENSUAMG00000001904)	ATP13A1 (ENSUAMG00000001148)	LPAR2 (ENSUAMG00000001027)	PBX4 (ENSUAMG00000000763)	CILP2 (ENSUAMG00000000697) #17	YJEFN3 (ENSUAMG00000000690) #18	NDUFA13 (ENSUAMG00000000686) #19	TSSK6 (ENSUAMG00000000680)	GATAD2A (ENSUAMG00000000666) #20	ENSUAMG00000000653 #22	MAU2 (ENSUAMG00000000016) #21	SUGP1 (ENSUAMG00000000010) #22	TM6SF2 (ENSUAMG00000000009) #23	HAPLN4 (ENSUAMG00000000008) #24	NCAN (ENSUAMG00000000007) #25	NR2C2AP (ENSUAMG00000000006) #26	RFXANK (ENSUAMG00000000005) #27	BORCS8 (ENSUAMG00000000004) #28	MEF2B (ENSUAMG00000000003) #30	TMEM161A (ENSUAMG00000000002) #31	SLC25A42 (ENSUAMG00000000001) #32
American black bear	MODERN SPECIES		TMEM42 (ENSUAMG00000001960)	KIF15 (ENSUAMG00000001916)	KIAA1143 (ENSUAMG00000001910)	ZNF501 (ENSUAMG00000001908)	ZNF502 (ENSUAMG00000001904)	ATP13A1 (ENSUAMG00000001148)	LPAR2 (ENSUAMG00000001027)	PBX4 (ENSUAMG00000000763)	CILP2 (ENSUAMG00000000697) #17	YJEFN3 (ENSUAMG00000000690) #18	NDUFA13 (ENSUAMG00000000686) #19	TSSK6 (ENSUAMG00000000680)	GATAD2A (ENSUAMG00000000666) #20	ENSUAMG00000000653 #22	MAU2 (ENSUAMG00000000016) #21	SUGP1 (ENSUAMG00000000010) #22	TM6SF2 (ENSUAMG00000000009) #23	HAPLN4 (ENSUAMG00000000008) #24	NCAN (ENSUAMG00000000007) #25	NR2C2AP (ENSUAMG00000000006) #26	RFXANK (ENSUAMG00000000005) #27	BORCS8 (ENSUAMG00000000004) #28	MEF2B (ENSUAMG00000000003) #30	TMEM161A (ENSUAMG00000000002) #31	SLC25A42 (ENSUAMG00000000001) #32
Laurasiatheria_c	ANCESTRAL SPECIES	16					ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Chiroptera	ANCESTRAL SPECIES	44						ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Microchiroptera	ANCESTRAL SPECIES	43					ENSGT00940000157178	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Greater horseshoe bat	MODERN SPECIES	9	TMA16 (ENSRFEG00010007959)	ENSRFEG00010007896	MARCHF1 (ENSRFEG00010007829)	LPL (ENSRFEG00010007714)	ENSRFEG00010007665	ATP13A1 (ENSRFEG00010007191)	GMIP (ENSRFEG00010007096)	LPAR2 (ENSRFEG00010007041)	PBX4 (ENSRFEG00010006894)	CILP2 (ENSRFEG00010006782) #17	YJEFN3 (ENSRFEG00010006740) #18	NDUFA13 (ENSRFEG00010006692) #19	TSSK6 (ENSRFEG00010006656)	GATAD2A (ENSRFEG00010006588) #20	MAU2 (ENSRFEG00010006479) #21	SUGP1 (ENSRFEG00010006391) #22	TM6SF2 (ENSRFEG00010006340) #23	HAPLN4 (ENSRFEG00010006311) #24	NCAN (ENSRFEG00010006275) #25	NR2C2AP (ENSRFEG00010006230) #26	RFXANK (ENSRFEG00010006139) #27	BORCS8 (ENSRFEG00010006052) #28	MEF2B (ENSRFEG00010005974) #30	TMEM161A (ENSRFEG00010005885) #31	SLC25A42 (ENSRFEG00010005823) #32	ARMC6 (ENSRFEG00010005797) #33	SUGP2 (ENSRFEG00010005746) #34	HOMER3 (ENSRFEG00010005693) #36	DDX49 (ENSRFEG00010005585) #37	CERS1 (ENSRFEG00010005439)	GDF1 (ENSRFEG00010020888)
Microbat	MODERN SPECIES	1248					ENSMLUG00000026606	LPL (ENSMLUG00000000724)	ATP13A1 (ENSMLUG00000007903)	GMIP (ENSMLUG00000023678)	LPAR2 (ENSMLUG00000007886)	CILP2 (ENSMLUG00000017369) #17	YJEFN3 (ENSMLUG00000017368) #18	NDUFA13 (ENSMLUG00000017367) #19	TSSK6 (ENSMLUG00000017365)	GATAD2A (ENSMLUG00000017364) #20	MAU2 (ENSMLUG00000017362) #21	SUGP1 (ENSMLUG00000017360) #22	TM6SF2 (ENSMLUG00000027634) #23	HAPLN4 (ENSMLUG00000017358) #24	NCAN (ENSMLUG00000017356) #25	NR2C2AP (ENSMLUG00000017355) #26	RFXANK (ENSMLUG00000017354) #27	BORCS8 (ENSMLUG00000025095) #28	MEF2B (ENSMLUG00000003299) #30	TMEM161A (ENSMLUG00000017352) #31	SLC25A42 (ENSMLUG00000012208) #32	ENSMLUG00000012203 #33	SUGP2 (ENSMLUG00000012189) #34	ENSMLUG00000025755	HOMER3 (ENSMLUG00000012170) #36	DDX49 (ENSMLUG00000012159) #37	COPE (ENSMLUG00000012147)
Megabat	MODERN SPECIES	1678							ATP13A1 (ENSPVAG00000017462)	GMIP (ENSPVAG00000017461)	LPAR2 (ENSPVAG00000017460)	PBX4 (ENSPVAG00000017459)	CILP2 (ENSPVAG00000017456) #17	YJEFN3 (ENSPVAG00000017455) #18	NDUFA13 (ENSPVAG00000017454) #19	GATAD2A (ENSPVAG00000017453) #20	MAU2 (ENSPVAG00000017452) #21	SUGP1 (ENSPVAG00000017451) #22	TM6SF2 (ENSPVAG00000017449) #23	HAPLN4 (ENSPVAG00000017448) #24	NCAN (ENSPVAG00000017445) #25	NR2C2AP (ENSPVAG00000017442) #26	RFXANK (ENSPVAG00000017440) #27	MEF2B (ENSPVAG00000017435) #30
Equus	ANCESTRAL SPECIES	23	ENSGT00940000162327	ENSGT00940000163610	ENSGT00940000161175	ENSGT01100000263521.a.a.b.a.b.b	ENSGT00390000018500.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00940000160464	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00940000162926
Donkey	MODERN SPECIES		ENSEASG00005006758	ENSEASG00005006754	ZNF692 (ENSEASG00005006750)	ZNF672 (ENSEASG00005035295)	ENSEASG00005006747	ENSEASG00005006649	GMIP (ENSEASG00005006622)	LPAR2 (ENSEASG00005031542)	ENSEASG00005033171	CILP2 (ENSEASG00005006616) #17	YJEFN3 (ENSEASG00005006613) #18	ENSEASG00005028100	TSSK6 (ENSEASG00005006607)	GATAD2A (ENSEASG00005006602) #20	MAU2 (ENSEASG00005006596) #21	SUGP1 (ENSEASG00005006593) #22	HAPLN4 (ENSEASG00005006590) #24	NCAN (ENSEASG00005006587) #25	NR2C2AP (ENSEASG00005027263) #26	RFXANK (ENSEASG00005006582) #27	BORCS8 (ENSEASG00005006580) #28	MEF2B (ENSEASG00005006578) #30	TMEM161A (ENSEASG00005006575) #31	SLC25A42 (ENSEASG00005006570) #32	ARMC6 (ENSEASG00005006568) #33	SUGP2 (ENSEASG00005006565) #34	HOMER3 (ENSEASG00005006562) #36	DDX49 (ENSEASG00005006560) #37	COPE (ENSEASG00005006557)	CERS1 (ENSEASG00005030456)	GDF1 (ENSEASG00005029430)
Horse	MODERN SPECIES	13	ZNF672 (ENSECAG00000013991)	SH3BP5L (ENSECAG00000000789)	ENSECAG00000049438	ENSECAG00000045987	ENSECAG00000040482	ATP13A1 (ENSECAG00000020569)	GMIP (ENSECAG00000011647)	LPAR2 (ENSECAG00000009148)	ENSECAG00000044009	CILP2 (ENSECAG00000000250) #17	YJEFN3 (ENSECAG00000018123) #18	TSSK6 (ENSECAG00000051056)	ENSECAG00000017590	GATAD2A (ENSECAG00000012875) #20	MAU2 (ENSECAG00000001359) #21	SUGP1 (ENSECAG00000013871) #22	HAPLN4 (ENSECAG00000020045) #24	NCAN (ENSECAG00000016115) #25	NR2C2AP (ENSECAG00000015219) #26	RFXANK (ENSECAG00000009442) #27	BORCS8 (ENSECAG00000007592) #28	MEF2B (ENSECAG00000022642) #30	TMEM161A (ENSECAG00000013963) #31	SLC25A42 (ENSECAG00000011367) #32	ARMC6 (ENSECAG00000006428) #33	SUGP2 (ENSECAG00000000129) #34	HOMER3 (ENSECAG00000023105) #36	DDX49 (ENSECAG00000012194) #37	COPE (ENSECAG00000024390)	CERS1 (ENSECAG00000052582)	GDF1 (ENSECAG00000026851)
Euarchontoglires	ANCESTRAL SPECIES	18					ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Primates	ANCESTRAL SPECIES	18					ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Strepsirrhini	DUPLICATION
Strepsirrhini	ANCESTRAL SPECIES																	ENSGT00410000025695.a.k #22
Bushbaby	MODERN SPECIES	220	CCDC124 (ENSOGAG00000012293)	SLC5A5 (ENSOGAG00000012290)	RPL18A (ENSOGAG00000031828)	JAK3 (ENSOGAG00000009777)	ENSOGAG00000029158	B3GNT3 (ENSOGAG00000001205)	FCHO1 (ENSOGAG00000006490)	MAP1S (ENSOGAG00000025035)	UNC13A (ENSOGAG00000027473)	COLGALT1 (ENSOGAG00000000093)	NIBAN3 (ENSOGAG00000000092)	PGLS (ENSOGAG00000000091)	SLC27A1 (ENSOGAG00000000089)	NXNL1 (ENSOGAG00000031624)	TMEM221 (ENSOGAG00000003706)	ENSOGAG00000027569 #22	MVB12A (ENSOGAG00000030761)	PLVAP (ENSOGAG00000032556)	GTPBP3 (ENSOGAG00000007014) #16	ANO8 (ENSOGAG00000007006) #15	DDA1 (ENSOGAG00000003701) #14	MRPL34 (ENSOGAG00000028616) #13	ABHD8 (ENSOGAG00000007003) #12	ANKLE1 (ENSOGAG00000008404) #11	BABAM1 (ENSOGAG00000008400) #10	USHBP1 (ENSOGAG00000008395)	NR2F6 (ENSOGAG00000030281) #9	MYO9B (ENSOGAG00000008379)	HAUS8 (ENSOGAG00000034468)	ENSOGAG00000031673	F2RL3 (ENSOGAG00000028611)
Strepsirrhini	ANCESTRAL SPECIES	33					ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.l #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Lemuriformes	ANCESTRAL SPECIES	45					ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.l #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Lemuriformes_a	ANCESTRAL SPECIES	65					ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.l #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Coquerels sifaka	MODERN SPECIES	589					ZNF14 (ENSPCOG00000028861)	ATP13A1 (ENSPCOG00000020533)	GMIP (ENSPCOG00000026022)	LPAR2 (ENSPCOG00000020323)	PBX4 (ENSPCOG00000016827)	CILP2 (ENSPCOG00000016451) #17	YJEFN3 (ENSPCOG00000028351) #18	NDUFA13 (ENSPCOG00000015544) #19	TSSK6 (ENSPCOG00000012813)	GATAD2A (ENSPCOG00000019794) #20	MAU2 (ENSPCOG00000020236) #21	SUGP1 (ENSPCOG00000017524) #22	TM6SF2 (ENSPCOG00000024818) #23	HAPLN4 (ENSPCOG00000023645) #24	NCAN (ENSPCOG00000015066) #25	NR2C2AP (ENSPCOG00000023079) #26	RFXANK (ENSPCOG00000019783) #27	BORCS8 (ENSPCOG00000016887) #28	MEF2B (ENSPCOG00000024251) #30	TMEM161A (ENSPCOG00000012683) #31	SLC25A42 (ENSPCOG00000026001) #32	ARMC6 (ENSPCOG00000017481) #33	SUGP2 (ENSPCOG00000016042) #34	HOMER3 (ENSPCOG00000014798) #36	DDX49 (ENSPCOG00000024973) #37	COPE (ENSPCOG00000015758)	GDF1 (ENSPCOG00000015607)
Greater bamboo lemur	MODERN SPECIES	392						GMIP (ENSPSMG00000002524)	LPAR2 (ENSPSMG00000002408)	PBX4 (ENSPSMG00000002398)	ENSPSMG00000002390	CILP2 (ENSPSMG00000002378) #17	YJEFN3 (ENSPSMG00000002364) #18	NDUFA13 (ENSPSMG00000002354) #19	TSSK6 (ENSPSMG00000002343)	GATAD2A (ENSPSMG00000002335) #20	MAU2 (ENSPSMG00000002309) #21	SUGP1 (ENSPSMG00000002255) #22	TM6SF2 (ENSPSMG00000002208) #23	HAPLN4 (ENSPSMG00000002199) #24	NCAN (ENSPSMG00000002186) #25	NR2C2AP (ENSPSMG00000002131) #26	RFXANK (ENSPSMG00000002047) #27	BORCS8 (ENSPSMG00000002009) #28	MEF2B (ENSPSMG00000001996) #30	TMEM161A (ENSPSMG00000001938) #31	SLC25A42 (ENSPSMG00000001893) #32	ARMC6 (ENSPSMG00000001861) #33	SUGP2 (ENSPSMG00000001742) #34	HOMER3 (ENSPSMG00000001606) #36	DDX49 (ENSPSMG00000001520) #37	COPE (ENSPSMG00000001405)	CERS1 (ENSPSMG00000001173)
Mouse lemur	MODERN SPECIES	16	ENSMICG00000038248	ACP5 (ENSMICG00000007032)	ELOF1 (ENSMICG00000011684)	CNN1 (ENSMICG00000011674)	ECSIT (ENSMICG00000043164)	ATP13A1 (ENSMICG00000005954)	GMIP (ENSMICG00000005944)	LPAR2 (ENSMICG00000047382)	PBX4 (ENSMICG00000005939)	CILP2 (ENSMICG00000038618) #17	YJEFN3 (ENSMICG00000043804) #18	NDUFA13 (ENSMICG00000027711) #19	TSSK6 (ENSMICG00000031087)	GATAD2A (ENSMICG00000015636) #20	MAU2 (ENSMICG00000015603) #21	ENSMICG00000047505 #22	ELAVL3 (ENSMICG00000016528)	PRKCSH (ENSMICG00000009913)	ODAD3 (ENSMICG00000009897)	RGL3 (ENSMICG00000009876)	EPOR (ENSMICG00000034457)	SWSAP1 (ENSMICG00000005683)	PLPPR2 (ENSMICG00000036197)	CCDC159 (ENSMICG00000004075)	TMEM205 (ENSMICG00000044601)	RAB3D (ENSMICG00000031435)	TSPAN16 (ENSMICG00000042148)	DOCK6 (ENSMICG00000004040)	ANGPTL8 (ENSMICG00000042533)	KANK2 (ENSMICG00000004036)	SPC24 (ENSMICG00000045263)
Bushbaby	MODERN SPECIES	220	BMS1 (ENSOGAG00000006511)	ZNF248 (ENSOGAG00000029260)	ENSOGAG00000034716	ZNF25 (ENSOGAG00000032242)	ENSOGAG00000003983	ATP13A1 (ENSOGAG00000002592)	GMIP (ENSOGAG00000002588)	LPAR2 (ENSOGAG00000034025)	PBX4 (ENSOGAG00000007450)	CILP2 (ENSOGAG00000028615) #17	YJEFN3 (ENSOGAG00000033582) #18	NDUFA13 (ENSOGAG00000007445) #19	TSSK6 (ENSOGAG00000027271)	GATAD2A (ENSOGAG00000007442) #20	MAU2 (ENSOGAG00000009979) #21	ENSOGAG00000009975 #22	TM6SF2 (ENSOGAG00000028833) #23	HAPLN4 (ENSOGAG00000009972) #24	NCAN (ENSOGAG00000010954) #25	NR2C2AP (ENSOGAG00000033463) #26	RFXANK (ENSOGAG00000010950) #27	BORCS8 (ENSOGAG00000028427) #28	MEF2B (ENSOGAG00000001694) #30	TMEM161A (ENSOGAG00000015720) #31	SLC25A42 (ENSOGAG00000007251) #32	ARMC6 (ENSOGAG00000007536) #33	SUGP2 (ENSOGAG00000024068) #34	HOMER3 (ENSOGAG00000008261) #36	DDX49 (ENSOGAG00000008259) #37	COPE (ENSOGAG00000031639)	CERS1 (ENSOGAG00000033679)
Haplorrhini	ANCESTRAL SPECIES	14					ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00390000010067	ENSGT00940000161356	ENSGT00390000001014	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Platyrrhini	ANCESTRAL SPECIES	25	ENSGT00390000010067.c	ENSGT00940000161356	ENSGT00390000001014.n	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a.g.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081.g.a #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Mas night monkey	MODERN SPECIES	1353	ENSANAG00000023146	ENSANAG00000002572	ZNF14 (ENSANAG00000032489)	ENSANAG00000000491	ATP13A1 (ENSANAG00000033092)	GMIP (ENSANAG00000001734)	LPAR2 (ENSANAG00000036455)	ENSANAG00000038455	PBX4 (ENSANAG00000032208)	CILP2 (ENSANAG00000024220) #17	YJEFN3 (ENSANAG00000026506) #18	NDUFA13 (ENSANAG00000033597) #19	TSSK6 (ENSANAG00000020096)	GATAD2A (ENSANAG00000038065) #20	MAU2 (ENSANAG00000026794) #21	SUGP1 (ENSANAG00000028538) #22	TM6SF2 (ENSANAG00000034245) #23	HAPLN4 (ENSANAG00000024057) #24	ENSANAG00000035988 #25	NR2C2AP (ENSANAG00000035166) #26	RFXANK (ENSANAG00000025466) #27	BORCS8 (ENSANAG00000034161) #28	MEF2B (ENSANAG00000020769) #30	TMEM161A (ENSANAG00000034160) #31	SLC25A42 (ENSANAG00000030310) #32	ARMC6 (ENSANAG00000025554) #33	SUGP2 (ENSANAG00000027159) #34	ENSANAG00000020793 #36	DDX49 (ENSANAG00000031415) #37	COPE (ENSANAG00000018604)	GDF1 (ENSANAG00000037936)
Cebidae	ANCESTRAL SPECIES	8	ENSGT00940000161356	ENSGT00390000001014.n	ENSGT00940000154251.A.a.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a.g.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081.g.a #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Marmoset	MODERN SPECIES	14	ENSCJAG00000072189	ENSCJAG00000071921	ENSCJAG00000060061	ZNF14 (ENSCJAG00000005527)	ZNF101 (ENSCJAG00000005545)	GMIP (ENSCJAG00000005633)	LPAR2 (ENSCJAG00000005646)	ENSCJAG00000023241	ENSCJAG00000070214	ENSCJAG00000073644	CILP2 (ENSCJAG00000005650) #17	YJEFN3 (ENSCJAG00000005654) #18	ENSCJAG00000043112 #19	GATAD2A (ENSCJAG00000040704) #20	MAU2 (ENSCJAG00000039088) #21	SUGP1 (ENSCJAG00000005755) #22	TM6SF2 (ENSCJAG00000039656) #23	HAPLN4 (ENSCJAG00000073329) #24	ENSCJAG00000070942	NCAN (ENSCJAG00000008512) #25	NR2C2AP (ENSCJAG00000019782) #26	RFXANK (ENSCJAG00000019775) #27	BORCS8 (ENSCJAG00000046526) #28	MEF2B (ENSCJAG00000019767) #30	TMEM161A (ENSCJAG00000019759) #31	SLC25A42 (ENSCJAG00000044017) #32	ARMC6 (ENSCJAG00000019747) #33	SUGP2 (ENSCJAG00000019714) #34	HOMER3 (ENSCJAG00000080144) #36	DDX49 (ENSCJAG00000042114) #37	COPE (ENSCJAG00000019706)
Cebidae_a	ANCESTRAL SPECIES	48			ENSGT00940000154251.A.a.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a.g.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081.g.a #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Capuchin	MODERN SPECIES	280	ENSCCAG00000033064	ENSCCAG00000016414	ZNF682 (ENSCCAG00000000964)	ZNF14 (ENSCCAG00000035187)	ZNF101 (ENSCCAG00000032395)	ATP13A1 (ENSCCAG00000033311)	GMIP (ENSCCAG00000030811)	LPAR2 (ENSCCAG00000036944)	PBX4 (ENSCCAG00000028260)	CILP2 (ENSCCAG00000025104) #17	YJEFN3 (ENSCCAG00000036770) #18	ENSCCAG00000027170 #19	TSSK6 (ENSCCAG00000019676)	GATAD2A (ENSCCAG00000036212) #20	MAU2 (ENSCCAG00000031923) #21	SUGP1 (ENSCCAG00000024177) #22	TM6SF2 (ENSCCAG00000030646) #23	HAPLN4 (ENSCCAG00000030280) #24	NCAN (ENSCCAG00000029973) #25	NR2C2AP (ENSCCAG00000034992) #26	RFXANK (ENSCCAG00000034756) #27	BORCS8 (ENSCCAG00000026464) #28	MEF2B (ENSCCAG00000025516) #30	ENSCCAG00000034387 #31	SLC25A42 (ENSCCAG00000028461) #32	ARMC6 (ENSCCAG00000027993) #33	SUGP2 (ENSCCAG00000023178) #34	HOMER3 (ENSCCAG00000024819) #36	DDX49 (ENSCCAG00000036092) #37	COPE (ENSCCAG00000036516)	CERS1 (ENSCCAG00000033033)
Bolivian squirrel monkey	MODERN SPECIES	199			ENSSBOG00000024223	ZNF14 (ENSSBOG00000029592)	ZNF101 (ENSSBOG00000033857)	ATP13A1 (ENSSBOG00000033381)	GMIP (ENSSBOG00000036091)	LPAR2 (ENSSBOG00000029005)	ENSSBOG00000031282	CILP2 (ENSSBOG00000026211) #17	YJEFN3 (ENSSBOG00000021793) #18	NDUFA13 (ENSSBOG00000019126) #19	TSSK6 (ENSSBOG00000018199)	GATAD2A (ENSSBOG00000029481) #20	MAU2 (ENSSBOG00000034577) #21	SUGP1 (ENSSBOG00000020160) #22	TM6SF2 (ENSSBOG00000031897) #23	HAPLN4 (ENSSBOG00000028603) #24	NCAN (ENSSBOG00000033005) #25	NR2C2AP (ENSSBOG00000031337) #26	RFXANK (ENSSBOG00000022019) #27	BORCS8 (ENSSBOG00000022945) #28	MEF2B (ENSSBOG00000024550) #30	TMEM161A (ENSSBOG00000031066) #31	SLC25A42 (ENSSBOG00000024288) #32	ENSSBOG00000024227 #33	SUGP2 (ENSSBOG00000020629) #34	HOMER3 (ENSSBOG00000030722) #36	DDX49 (ENSSBOG00000035812) #37	COPE (ENSSBOG00000014113)	CERS1 (ENSSBOG00000000038)
Catarrhini	DUPLICATION
Catarrhini	ANCESTRAL SPECIES																	ENSGT00410000025695.a.m #22
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT00410000025695.a.m #22
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00410000025695.a.m #22
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00410000025695.a.m #22
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00410000025695.a.m #22
Cercopithecinae_d	ANCESTRAL SPECIES																	ENSGT00410000025695.a.m #22
Sooty mangabey	MODERN SPECIES	309	ENSCATG00000045028	LMNB1 (ENSCATG00000034925)	MARCHF3 (ENSCATG00000015290)	ENSCATG00000033679	MEGF10 (ENSCATG00000045270)	PRRC1 (ENSCATG00000031589)	CTXN3 (ENSCATG00000018324)	CCDC192 (ENSCATG00000042132)	SLC12A2 (ENSCATG00000023575)	FBN2 (ENSCATG00000038815)	SLC27A6 (ENSCATG00000007497)	ISOC1 (ENSCATG00000039096)	ADAMTS19 (ENSCATG00000038533)	MINAR2 (ENSCATG00000035432)	CHSY3 (ENSCATG00000038876)	ENSCATG00000035240 #22	ENSCATG00000037620	LYRM7 (ENSCATG00000037078)	CDC42SE2 (ENSCATG00000034894)	RAPGEF6 (ENSCATG00000040471)	FNIP1 (ENSCATG00000036918)	MEIKIN (ENSCATG00000037472)	ACSL6 (ENSCATG00000013697)	IL3 (ENSCATG00000041084)	CSF2 (ENSCATG00000042168)	P4HA2 (ENSCATG00000037172)	PDLIM4 (ENSCATG00000018873)	SLC22A4 (ENSCATG00000039145)	SLC22A5 (ENSCATG00000030925)	ENSCATG00000032180	IRF1 (ENSCATG00000036411)
Catarrhini	DUPLICATION
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000154251.A.a.b	ENSGT00940000162960.A	ENSGT00940000153236.a.a.b.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.n.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856.d #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00910000148304	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000162960.A	ENSGT00490000043385.u.a.b	ENSGT00940000153236.a.a.b.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.n.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856.d #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00910000148304	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478
Hominidae	ANCESTRAL SPECIES		ENSGT00940000162960.A	ENSGT00490000043385.u.a.b	ENSGT00940000153236.a.a.b.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.n.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856.d #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000162960.A	ENSGT00490000043385.u.a.b	ENSGT00940000153236.a.a.b.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.n.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856.d #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000162960.A	ENSGT00490000043385.u.a.b	ENSGT00940000153236.a.a.b.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.n.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856.d #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Pan	ANCESTRAL SPECIES	14	ENSGT00940000162960.A	ENSGT00490000043385.u.a.b	ENSGT00940000153236.a.a.b.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.n.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856.d #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Bonobo	MODERN SPECIES	10	ENSPPAG00000039166	ENSPPAG00000040622	ENSPPAG00000028827	ZNF14 (ENSPPAG00000036864)	ZNF101 (ENSPPAG00000028690)	ATP13A1 (ENSPPAG00000042644)	GMIP (ENSPPAG00000037482)	LPAR2 (ENSPPAG00000043772)	PBX4 (ENSPPAG00000035891)	CILP2 (ENSPPAG00000035758) #17	YJEFN3 (ENSPPAG00000025286) #18	ENSPPAG00000016456 #19	TSSK6 (ENSPPAG00000022354)	GATAD2A (ENSPPAG00000003218) #20	MAU2 (ENSPPAG00000032359) #21	SUGP1 (ENSPPAG00000037102) #22	TM6SF2 (ENSPPAG00000043499) #23	HAPLN4 (ENSPPAG00000013291) #24	NCAN (ENSPPAG00000003961) #25	NR2C2AP (ENSPPAG00000008303) #26	RFXANK (ENSPPAG00000032045) #27	BORCS8 (ENSPPAG00000033735) #28	MEF2B (ENSPPAG00000029747) #30	TMEM161A (ENSPPAG00000041901) #31	SLC25A42 (ENSPPAG00000036060) #32	ARMC6 (ENSPPAG00000040716) #33	SUGP2 (ENSPPAG00000043787) #34	HOMER3 (ENSPPAG00000037113) #36	DDX49 (ENSPPAG00000035217) #37	COPE (ENSPPAG00000020767)	CERS1 (ENSPPAG00000036380)
Chimpanzee	MODERN SPECIES	10	ZNF253 (ENSPTRG00000029074)	ENSPTRG00000045322	ZNF506 (ENSPTRG00000010755)	ZNF14 (ENSPTRG00000022814)	ZNF101 (ENSPTRG00000045970)	ATP13A1 (ENSPTRG00000010747)	GMIP (ENSPTRG00000010746)	LPAR2 (ENSPTRG00000010745)	PBX4 (ENSPTRG00000010744)	CILP2 (ENSPTRG00000010743) #17	YJEFN3 (ENSPTRG00000010742) #18	NDUFA13 (ENSPTRG00000010741) #19	ENSPTRG00000043712	GATAD2A (ENSPTRG00000010739) #20	MAU2 (ENSPTRG00000010738) #21	SUGP1 (ENSPTRG00000010737) #22	TM6SF2 (ENSPTRG00000010736) #23	HAPLN4 (ENSPTRG00000033676) #24	NCAN (ENSPTRG00000010734) #25	NR2C2AP (ENSPTRG00000010733) #26	RFXANK (ENSPTRG00000010732) #27	BORCS8 (ENSPTRG00000039907) #28	MEF2B (ENSPTRG00000010731) #30	TMEM161A (ENSPTRG00000010730) #31	SLC25A42 (ENSPTRG00000010729) #32	ARMC6 (ENSPTRG00000010728) #33	SUGP2 (ENSPTRG00000010727) #34	HOMER3 (ENSPTRG00000010726) #36	DDX49 (ENSPTRG00000010725) #37	COPE (ENSPTRG00000010723)	CERS1 (ENSPTRG00000039869)
Human	MODERN SPECIES	10	ZNF253 (ENSG00000256771)	ZNF506 (ENSG00000081665)	ZNF14 (ENSG00000105708)	ZNF101 (ENSG00000181896)	ATP13A1 (ENSG00000105726)	GMIP (ENSG00000089639)	LPAR2 (ENSG00000064547)	PBX4 (ENSG00000105717)	CILP2 (ENSG00000160161) #17	YJEFN3 (ENSG00000250067) #18	ENSG00000258674	NDUFA13 (ENSG00000186010) #19	TSSK6 (ENSG00000178093)	GATAD2A (ENSG00000167491) #20	MAU2 (ENSG00000129933) #21	SUGP1 (ENSG00000105705) #22	TM6SF2 (ENSG00000213996) #23	HAPLN4 (ENSG00000187664) #24	NCAN (ENSG00000130287) #25	NR2C2AP (ENSG00000184162) #26	RFXANK (ENSG00000064490) #27	BORCS8 (ENSG00000254901) #28	BORCS8-MEF2B (ENSG00000064489)	MEF2B (ENSG00000213999) #30	TMEM161A (ENSG00000064545) #31	SLC25A42 (ENSG00000181035) #32	ARMC6 (ENSG00000105676) #33	SUGP2 (ENSG00000064607) #34	HOMER3 (ENSG00000051128) #36	DDX49 (ENSG00000105671) #37	COPE (ENSG00000105669)
Gorilla	MODERN SPECIES	10	ZNF93 (ENSGGOG00000001955)	ENSGGOG00000043851	ENSGGOG00000022087	ZNF14 (ENSGGOG00000022750)	ZNF101 (ENSGGOG00000006033)	ATP13A1 (ENSGGOG00000006026)	GMIP (ENSGGOG00000006016)	LPAR2 (ENSGGOG00000006010)	PBX4 (ENSGGOG00000006000)	CILP2 (ENSGGOG00000005993) #17	YJEFN3 (ENSGGOG00000005985) #18	NDUFA13 (ENSGGOG00000040690) #19	TSSK6 (ENSGGOG00000042656)	GATAD2A (ENSGGOG00000005973) #20	MAU2 (ENSGGOG00000002989) #21	SUGP1 (ENSGGOG00000002984) #22	TM6SF2 (ENSGGOG00000002983) #23	HAPLN4 (ENSGGOG00000002981) #24	NCAN (ENSGGOG00000002977) #25	NR2C2AP (ENSGGOG00000012536) #26	RFXANK (ENSGGOG00000012530) #27	BORCS8 (ENSGGOG00000044155) #28	MEF2B (ENSGGOG00000009730) #30	TMEM161A (ENSGGOG00000022481) #31	SLC25A42 (ENSGGOG00000008113) #32	ARMC6 (ENSGGOG00000006708) #33	SUGP2 (ENSGGOG00000013540) #34	HOMER3 (ENSGGOG00000007011) #36	DDX49 (ENSGGOG00000037966) #37	COPE (ENSGGOG00000006987)	ENSGGOG00000025662
Orangutan	MODERN SPECIES	10	ZNF682 (ENSPPYG00000040895)	ENSPPYG00000035360	ENSPPYG00000009781	ZNF14 (ENSPPYG00000009778)	ZNF101 (ENSPPYG00000009777)	ATP13A1 (ENSPPYG00000009776)	GMIP (ENSPPYG00000009775)	LPAR2 (ENSPPYG00000009774)	PBX4 (ENSPPYG00000035724)	CILP2 (ENSPPYG00000009773) #17	YJEFN3 (ENSPPYG00000009772) #18	NDUFA13 (ENSPPYG00000036460) #19	TSSK6 (ENSPPYG00000009770)	GATAD2A (ENSPPYG00000009769) #20	MAU2 (ENSPPYG00000009767) #21	SUGP1 (ENSPPYG00000009766) #22	TM6SF2 (ENSPPYG00000009765) #23	HAPLN4 (ENSPPYG00000009764) #24	NCAN (ENSPPYG00000009763) #25	NR2C2AP (ENSPPYG00000009762) #26	RFXANK (ENSPPYG00000009761) #27	BORCS8 (ENSPPYG00000039532) #28	MEF2B (ENSPPYG00000009760) #30	TMEM161A (ENSPPYG00000009759) #31	SLC25A42 (ENSPPYG00000009758) #32	ARMC6 (ENSPPYG00000009757) #33	SUGP2 (ENSPPYG00000009756) #34	HOMER3 (ENSPPYG00000035001) #36	DDX49 (ENSPPYG00000009755) #37	COPE (ENSPPYG00000009753)	CERS1 (ENSPPYG00000029471)
Gibbon	MODERN SPECIES		ENSNLEG00000031307	ZNF506 (ENSNLEG00000006340)	ZNF14 (ENSNLEG00000006339)	ZNF101 (ENSNLEG00000006338)	ATP13A1 (ENSNLEG00000006315)	ENSNLEG00000006312	PBX4 (ENSNLEG00000006307)	ENSNLEG00000034918	ENSNLEG00000018526	CILP2 (ENSNLEG00000006302) #17	YJEFN3 (ENSNLEG00000027046) #18	NDUFA13 (ENSNLEG00000006289) #19	TSSK6 (ENSNLEG00000019216)	GATAD2A (ENSNLEG00000006277) #20	MAU2 (ENSNLEG00000026855) #21	SUGP1 (ENSNLEG00000006236) #22	TM6SF2 (ENSNLEG00000006229) #23	HAPLN4 (ENSNLEG00000006225) #24	NCAN (ENSNLEG00000006221) #25	NR2C2AP (ENSNLEG00000006212) #26	RFXANK (ENSNLEG00000006200) #27	ENSNLEG00000006195 #28	MEF2B (ENSNLEG00000006191) #30	ENSNLEG00000006186 #31	SLC25A42 (ENSNLEG00000027898) #32	ENSNLEG00000006185	ARMC6 (ENSNLEG00000006169) #33	SUGP2 (ENSNLEG00000006162) #34	HOMER3 (ENSNLEG00000006154) #36	DDX49 (ENSNLEG00000006136) #37	COPE (ENSNLEG00000006090)
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00940000162960.A	ENSGT00940000153236.a.a.b.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.n.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856.d #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00910000148304	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000162960.A.c	ENSGT01100000263495.E	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.n.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856.d #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00910000148304	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478
Vervet Monkey	MODERN SPECIES	25	ZNF682 (ENSCSAG00000005029)	ENSCSAG00000005034	ENSCSAG00000005037	ENSCSAG00000005039	ZNF14 (ENSCSAG00000005044)	ZNF101 (ENSCSAG00000005048)	ATP13A1 (ENSCSAG00000005054)	GMIP (ENSCSAG00000005061)	LPAR2 (ENSCSAG00000005063)	PBX4 (ENSCSAG00000005070)	CILP2 (ENSCSAG00000005072) #17	NDUFA13 (ENSCSAG00000005084) #19	TSSK6 (ENSCSAG00000018500)	GATAD2A (ENSCSAG00000005096) #20	MAU2 (ENSCSAG00000005122) #21	SUGP1 (ENSCSAG00000005148) #22	TM6SF2 (ENSCSAG00000005157) #23	HAPLN4 (ENSCSAG00000005162) #24	NCAN (ENSCSAG00000005190) #25	NR2C2AP (ENSCSAG00000005205) #26	RFXANK (ENSCSAG00000005210) #27	BORCS8 (ENSCSAG00000005214) #28	MEF2B (ENSCSAG00000005217) #30	TMEM161A (ENSCSAG00000005220) #31	SLC25A42 (ENSCSAG00000005223) #32	ARMC6 (ENSCSAG00000005225) #33	SUGP2 (ENSCSAG00000005226) #34	HOMER3 (ENSCSAG00000005233) #36	DDX49 (ENSCSAG00000005251) #37	COPE (ENSCSAG00000005262)	CERS1 (ENSCSAG00000005267)
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000162960.A.c	ENSGT01100000263495.E	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.n.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856.d #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00910000148304	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478
Macaca	ANCESTRAL SPECIES	21	ENSGT00940000162960.A.c	ENSGT00940000153236.a.a.b.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.n.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856.d #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00910000148304	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478
Pig-tailed macaque	MODERN SPECIES	76	ZNF506 (ENSMNEG00000037374)	ZNF14 (ENSMNEG00000020785)	ENSMNEG00000042306	ZNF101 (ENSMNEG00000034981)	ATP13A1 (ENSMNEG00000029828)	GMIP (ENSMNEG00000042233)	LPAR2 (ENSMNEG00000042518)	PBX4 (ENSMNEG00000041601)	ENSMNEG00000010618	CILP2 (ENSMNEG00000034197) #17	YJEFN3 (ENSMNEG00000037092) #18	NDUFA13 (ENSMNEG00000039567) #19	TSSK6 (ENSMNEG00000009045)	ENSMNEG00000043233 #20	MAU2 (ENSMNEG00000034232) #21	SUGP1 (ENSMNEG00000042010) #22	TM6SF2 (ENSMNEG00000043588) #23	HAPLN4 (ENSMNEG00000034804) #24	NCAN (ENSMNEG00000029669) #25	RFXANK (ENSMNEG00000025165) #27	NR2C2AP (ENSMNEG00000037479) #26	BORCS8 (ENSMNEG00000033374) #28	MEF2B (ENSMNEG00000041102) #30	TMEM161A (ENSMNEG00000027465) #31	SLC25A42 (ENSMNEG00000043911) #32	ENSMNEG00000030397	ARMC6 (ENSMNEG00000043051) #33	SUGP2 (ENSMNEG00000043062) #34	HOMER3 (ENSMNEG00000042042) #36	DDX49 (ENSMNEG00000029654) #37	COPE (ENSMNEG00000031787)
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000154251.A.a.b	ENSGT00940000162960.A.c	ENSGT00940000153236.a.a.b.b	ENSGT00940000165497.F.b.b.a.a.a	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00940000160464	ENSGT00390000004097.a.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.n.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00940000162926
Rhesus	MODERN SPECIES	10	ZNF93 (ENSMMUG00000054055)	ENSMMUG00000061017	ZNF506 (ENSMMUG00000028833)	ENSMMUG00000062373	ZNF14 (ENSMMUG00000021989)	ENSMMUG00000005860	ATP13A1 (ENSMMUG00000043400)	GMIP (ENSMMUG00000003036)	LPAR2 (ENSMMUG00000000654)	PBX4 (ENSMMUG00000048108)	CILP2 (ENSMMUG00000011352) #17	YJEFN3 (ENSMMUG00000011351) #18	TSSK6 (ENSMMUG00000049072)	GATAD2A (ENSMMUG00000003164) #20	MAU2 (ENSMMUG00000008931) #21	SUGP1 (ENSMMUG00000028834) #22	TM6SF2 (ENSMMUG00000008576) #23	HAPLN4 (ENSMMUG00000008578) #24	NCAN (ENSMMUG00000062498) #25	NR2C2AP (ENSMMUG00000010723) #26	RFXANK (ENSMMUG00000010722) #27	BORCS8 (ENSMMUG00000018368) #30	TMEM161A (ENSMMUG00000018367) #31	SLC25A42 (ENSMMUG00000019669) #32	ARMC6 (ENSMMUG00000019668) #33	SUGP2 (ENSMMUG00000019665) #34	HOMER3 (ENSMMUG00000023294) #36	DDX49 (ENSMMUG00000023293) #37	COPE (ENSMMUG00000023291)	CERS1 (ENSMMUG00000059247)	GDF1 (ENSMMUG00000023290)
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000003085 #20	ENSMFAG00000039432	ZNF93 (ENSMFAG00000035382)	ZNF506 (ENSMFAG00000039702)	ENSMFAG00000056328	ZNF14 (ENSMFAG00000042563)	ZNF101 (ENSMFAG00000042473)	ATP13A1 (ENSMFAG00000045331)	LPAR2 (ENSMFAG00000040780)	GMIP (ENSMFAG00000046087)	PBX4 (ENSMFAG00000031948)	CILP2 (ENSMFAG00000064577) #17	YJEFN3 (ENSMFAG00000011503) #18	ENSMFAG00000002152 #20	MAU2 (ENSMFAG00000041829) #21	SUGP1 (ENSMFAG00000031157) #22	TM6SF2 (ENSMFAG00000006917) #23	HAPLN4 (ENSMFAG00000029816) #24	NCAN (ENSMFAG00000043588) #25	NR2C2AP (ENSMFAG00000042311) #26	RFXANK (ENSMFAG00000003753) #27	MEF2B (ENSMFAG00000032755) #30	SLC25A42 (ENSMFAG00000039473) #32	TMEM161A (ENSMFAG00000043553) #31	ARMC6 (ENSMFAG00000000505) #33	SUGP2 (ENSMFAG00000040352) #34	HOMER3 (ENSMFAG00000031509) #36	DDX49 (ENSMFAG00000044697) #37	COPE (ENSMFAG00000038870)	GDF1 (ENSMFAG00000064570)	CERS1 (ENSMFAG00000044990)
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00940000162960.A.c	ENSGT01100000263495.E	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.n.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856.d #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Olive baboon	MODERN SPECIES	12	ZNF682 (ENSPANG00000017939)	ZNF93 (ENSPANG00000015321)	ENSPANG00000046193	ZNF506 (ENSPANG00000007279)	ZNF14 (ENSPANG00000006684)	ATP13A1 (ENSPANG00000003160)	GMIP (ENSPANG00000020293)	LPAR2 (ENSPANG00000020387)	PBX4 (ENSPANG00000004463)	CILP2 (ENSPANG00000002530) #17	YJEFN3 (ENSPANG00000015322) #18	NDUFA13 (ENSPANG00000001628) #19	TSSK6 (ENSPANG00000005919)	GATAD2A (ENSPANG00000011632) #20	MAU2 (ENSPANG00000002876) #21	SUGP1 (ENSPANG00000014398) #22	TM6SF2 (ENSPANG00000017375) #23	HAPLN4 (ENSPANG00000004385) #24	NCAN (ENSPANG00000017942) #25	NR2C2AP (ENSPANG00000017708) #26	RFXANK (ENSPANG00000011633) #27	BORCS8 (ENSPANG00000034354) #28	MEF2B (ENSPANG00000023043) #30	TMEM161A (ENSPANG00000023920) #31	SLC25A42 (ENSPANG00000004441) #32	ARMC6 (ENSPANG00000002531) #33	SUGP2 (ENSPANG00000004442) #34	HOMER3 (ENSPANG00000004386) #36	DDX49 (ENSPANG00000003161) #37	COPE (ENSPANG00000002532)	CERS1 (ENSPANG00000005280)
Cercopithecinae_d	ANCESTRAL SPECIES	8	ENSGT00940000162960.A.c	ENSGT01100000263495.E	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.n.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856.d #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Sooty mangabey	MODERN SPECIES	347	ENSCATG00000039728 #20	ZNF93 (ENSCATG00000042867)	ENSCATG00000037145	ZNF14 (ENSCATG00000028572)	ZNF101 (ENSCATG00000020203)	ATP13A1 (ENSCATG00000034481)	GMIP (ENSCATG00000030063)	LPAR2 (ENSCATG00000036510)	PBX4 (ENSCATG00000035336)	CILP2 (ENSCATG00000040476) #17	YJEFN3 (ENSCATG00000037712) #18	NDUFA13 (ENSCATG00000038956) #19	TSSK6 (ENSCATG00000003439)	ENSCATG00000035199 #20	MAU2 (ENSCATG00000015302) #21	SUGP1 (ENSCATG00000033059) #22	TM6SF2 (ENSCATG00000038371) #23	HAPLN4 (ENSCATG00000033215) #24	NCAN (ENSCATG00000033037) #25	NR2C2AP (ENSCATG00000035313) #26	RFXANK (ENSCATG00000032949) #27	BORCS8 (ENSCATG00000034039) #28	MEF2B (ENSCATG00000031174) #30	TMEM161A (ENSCATG00000036119) #31	SLC25A42 (ENSCATG00000035155) #32	ARMC6 (ENSCATG00000032065) #33	SUGP2 (ENSCATG00000029755) #34	HOMER3 (ENSCATG00000036483) #36	DDX49 (ENSCATG00000032577) #37	COPE (ENSCATG00000038467)	CERS1 (ENSCATG00000033850)
Drill	MODERN SPECIES	160	ENSMLEG00000039824	ZNF506 (ENSMLEG00000035015)	ZNF14 (ENSMLEG00000024882)	ENSMLEG00000034754	ZNF101 (ENSMLEG00000038564)	ATP13A1 (ENSMLEG00000038891)	GMIP (ENSMLEG00000015104)	LPAR2 (ENSMLEG00000038948)	ENSMLEG00000038352	PBX4 (ENSMLEG00000028081)	CILP2 (ENSMLEG00000038834) #17	NDUFA13 (ENSMLEG00000027225) #19	TSSK6 (ENSMLEG00000010320)	GATAD2A (ENSMLEG00000040547) #20	MAU2 (ENSMLEG00000035371) #21	SUGP1 (ENSMLEG00000043364) #22	TM6SF2 (ENSMLEG00000027647) #23	HAPLN4 (ENSMLEG00000043866) #24	NCAN (ENSMLEG00000035960) #25	NR2C2AP (ENSMLEG00000026610) #26	RFXANK (ENSMLEG00000007628) #27	BORCS8 (ENSMLEG00000036175) #28	MEF2B (ENSMLEG00000002780) #30	TMEM161A (ENSMLEG00000041570) #31	SLC25A42 (ENSMLEG00000038599) #32	ARMC6 (ENSMLEG00000039585) #33	SUGP2 (ENSMLEG00000036719) #34	HOMER3 (ENSMLEG00000042234) #36	DDX49 (ENSMLEG00000042550) #37	COPE (ENSMLEG00000042923)	CERS1 (ENSMLEG00000020659)
Rhinopithecus	ANCESTRAL SPECIES			ENSGT00940000153236.a.a.b.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a.n.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856.d #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Black snub-nosed monkey	MODERN SPECIES	1576			ENSRBIG00000030741	ZNF14 (ENSRBIG00000042038)	ZNF101 (ENSRBIG00000029302)	ATP13A1 (ENSRBIG00000028613)	GMIP (ENSRBIG00000034503)	LPAR2 (ENSRBIG00000028307)	PBX4 (ENSRBIG00000043379)	CILP2 (ENSRBIG00000033619) #17	YJEFN3 (ENSRBIG00000044837) #18	NDUFA13 (ENSRBIG00000029310) #19	TSSK6 (ENSRBIG00000020631)	ENSRBIG00000029752 #20	MAU2 (ENSRBIG00000036077) #21	SUGP1 (ENSRBIG00000035555) #22	TM6SF2 (ENSRBIG00000035648) #23	HAPLN4 (ENSRBIG00000028696) #24	NCAN (ENSRBIG00000028711) #25	RFXANK (ENSRBIG00000027696) #27	NR2C2AP (ENSRBIG00000035480) #26	BORCS8 (ENSRBIG00000044655) #28	MEF2B (ENSRBIG00000037482) #30	TMEM161A (ENSRBIG00000035635) #31	SLC25A42 (ENSRBIG00000027977) #32	ENSRBIG00000034545	ARMC6 (ENSRBIG00000038109) #33	SUGP2 (ENSRBIG00000020354) #34	HOMER3 (ENSRBIG00000038778) #36	DDX49 (ENSRBIG00000030758) #37	COPE (ENSRBIG00000040843)
Golden snub-nosed monkey	MODERN SPECIES	2586		ZNF506 (ENSRROG00000034835)	ZNF14 (ENSRROG00000034519)	ENSRROG00000040378	ZNF101 (ENSRROG00000034698)	ATP13A1 (ENSRROG00000033237)	GMIP (ENSRROG00000033996)	LPAR2 (ENSRROG00000044369)	PBX4 (ENSRROG00000033089)	CILP2 (ENSRROG00000044306) #17	YJEFN3 (ENSRROG00000040358) #18	NDUFA13 (ENSRROG00000043641) #19	TSSK6 (ENSRROG00000027240)	ENSRROG00000031855 #20	MAU2 (ENSRROG00000032649) #21	SUGP1 (ENSRROG00000030048) #22	TM6SF2 (ENSRROG00000036675) #23	HAPLN4 (ENSRROG00000029649) #24	NCAN (ENSRROG00000037872) #25	NR2C2AP (ENSRROG00000033994) #26	RFXANK (ENSRROG00000028283) #27	BORCS8 (ENSRROG00000045680) #28	MEF2B (ENSRROG00000033740) #30	TMEM161A (ENSRROG00000024629) #31	SLC25A42 (ENSRROG00000040352) #32	ARMC6 (ENSRROG00000034739) #33	SUGP2 (ENSRROG00000029264) #34	HOMER3 (ENSRROG00000038822) #36	DDX49 (ENSRROG00000032460) #37	COPE (ENSRROG00000032396)	CERS1 (ENSRROG00000038529)
Catarrhini	ANCESTRAL SPECIES																	ENSGT00410000025695.a.n.b #22
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT00410000025695.a.n.b #22
Rhinopithecus	ANCESTRAL SPECIES	856																ENSGT00410000025695.a.n.b #22	ENSGT00940000162576	ENSGT00940000154158.k.b.b.a.b
Golden snub-nosed monkey	MODERN SPECIES	1897																ENSRROG00000031017 #22	ATXN7L3B (ENSRROG00000013750)	ENSRROG00000033934
Black snub-nosed monkey	MODERN SPECIES	118																ENSRBIG00000037600 #22	ATXN7L3B (ENSRBIG00000018753)	ENSRBIG00000042017
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00410000025695.a.n.b #22
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00530000063626.b	ENSGT00390000001285	ENSGT00950000183039.A	ENSGT00940000156088	ENSGT00940000157212.B	ENSGT00940000158153	ENSGT00390000005727.a.b.b.cb	ENSGT00940000160214	ENSGT00390000001116	ENSGT00940000161088	ENSGT00390000017998	ENSGT00940000156786	ENSGT00940000156429	ENSGT00950000182885.A.b	ENSGT00940000155878	ENSGT00410000025695.a.n.b #22	ENSGT00940000162576	ENSGT00910000147024	ENSGT00940000157371	ENSGT00940000159670	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00390000017839.o.b.b.b.f	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT01050000244986.b.b.d.a.a.b
Macaca	ANCESTRAL SPECIES	6	ENSGT00530000063626.b	ENSGT00390000001285	ENSGT00950000183039.A	ENSGT00940000156088	ENSGT00940000157212.B	ENSGT00940000158153	ENSGT00390000005727.a.b.b.cb	ENSGT00940000160214	ENSGT00390000001116	ENSGT00940000161088	ENSGT00390000017998	ENSGT00940000156786	ENSGT00940000156429	ENSGT00950000182885.A.b	ENSGT00940000155878	ENSGT00410000025695.a.n.b #22	ENSGT00940000162576	ENSGT00910000147024	ENSGT00940000157371	ENSGT00940000159670	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.lb	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT01050000244986.b.b.d.a.a.b	ENSGT00390000009168.hb
Pig-tailed macaque	MODERN SPECIES	517	CNOT2 (ENSMNEG00000045426)	KCNMB4 (ENSMNEG00000039891)	PTPRB (ENSMNEG00000033910)	ENSMNEG00000030996	PTPRR (ENSMNEG00000031531)	TSPAN8 (ENSMNEG00000043021)	ENSMNEG00000005986	LGR5 (ENSMNEG00000043876)	ZFC3H1 (ENSMNEG00000008807)	THAP2 (ENSMNEG00000038799)	TMEM19 (ENSMNEG00000032989)	RAB21 (ENSMNEG00000037678)	TBC1D15 (ENSMNEG00000044834)	TPH2 (ENSMNEG00000036855)	TRHDE (ENSMNEG00000038410)	ENSMNEG00000035574 #22	ATXN7L3B (ENSMNEG00000006304)	ENSMNEG00000002104	KCNC2 (ENSMNEG00000035997)	CAPS2 (ENSMNEG00000011146)	GLIPR1L1 (ENSMNEG00000028603)	GLIPR1L2 (ENSMNEG00000044396)	GLIPR1 (ENSMNEG00000044536)	ENSMNEG00000034922	ENSMNEG00000045114	ENSMNEG00000040738	PHLDA1 (ENSMNEG00000033607)	NAP1L1 (ENSMNEG00000035793)	BBS10 (ENSMNEG00000040224)	ENSMNEG00000030308	OSBPL8 (ENSMNEG00000028835)
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00530000063626.b	ENSGT00390000001285	ENSGT00950000183039.A	ENSGT00940000156088	ENSGT00940000157212.B	ENSGT00940000158153	ENSGT00390000005727.a.b.b.cb	ENSGT00940000160214	ENSGT00390000001116	ENSGT00940000161088	ENSGT00390000017998	ENSGT00940000156786	ENSGT00940000156429	ENSGT00950000182885.A.b	ENSGT00940000155878	ENSGT00410000025695.a.n.b #22	ENSGT00940000162576	ENSGT00940000157371	ENSGT00940000159670	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00940000158854.ab.a	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00390000009168.hb	ENSGT00530000063074.b.b	ENSGT00940000154980
Cercopithecinae_d	ANCESTRAL SPECIES	3	ENSGT00530000063626.b	ENSGT00390000001285	ENSGT00950000183039.A	ENSGT00940000156088	ENSGT00940000157212.B	ENSGT00940000158153	ENSGT00390000005727.a.b.b.cb	ENSGT00940000160214	ENSGT00390000001116	ENSGT00940000161088	ENSGT00390000017998	ENSGT00940000156786	ENSGT00940000156429	ENSGT00950000182885.A.b	ENSGT00940000155878	ENSGT00410000025695.a.n.b #22	ENSGT00940000162576	ENSGT00940000157371	ENSGT00940000159670	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00390000018052.k	ENSGT00940000158854.ab.a	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00390000009168.hb	ENSGT00530000063074.b.b
Sooty mangabey	MODERN SPECIES	582	KCNMB4 (ENSCATG00000026892)	PTPRB (ENSCATG00000033946)	PTPRR (ENSCATG00000040356)	ENSCATG00000032640	TSPAN8 (ENSCATG00000031127)	ENSCATG00000032435	LGR5 (ENSCATG00000039556)	ZFC3H1 (ENSCATG00000016321)	THAP2 (ENSCATG00000038126)	TMEM19 (ENSCATG00000035854)	RAB21 (ENSCATG00000029219)	TBC1D15 (ENSCATG00000032820)	ENSCATG00000033175	TPH2 (ENSCATG00000037085)	TRHDE (ENSCATG00000005594)	ENSCATG00000033580 #22	ATXN7L3B (ENSCATG00000002045)	KCNC2 (ENSCATG00000034752)	CAPS2 (ENSCATG00000044038)	GLIPR1L1 (ENSCATG00000035838)	GLIPR1L2 (ENSCATG00000032595)	GLIPR1 (ENSCATG00000007700)	KRR1 (ENSCATG00000038219)	ENSCATG00000040362	ENSCATG00000010102	NAP1L1 (ENSCATG00000032285)	ENSCATG00000039964	BBS10 (ENSCATG00000042101)	OSBPL8 (ENSCATG00000036635)	ENSCATG00000005498	ENSCATG00000039522
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	5844																ENSTSYG00000033354 #22
Tarsier	MODERN SPECIES	4863											YJEFN3 (ENSTSYG00000036056) #18	NDUFA13 (ENSTSYG00000012695) #19	TSSK6 (ENSTSYG00000027337)	GATAD2A (ENSTSYG00000000285) #20	MAU2 (ENSTSYG00000005181) #21	SUGP1 (ENSTSYG00000005329) #22	TM6SF2 (ENSTSYG00000029039) #23
Euarchontoglires_A	ANCESTRAL SPECIES	20					ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Tree shrew	MODERN SPECIES	118																ENSTBEG00000016501 #22
Glires	ANCESTRAL SPECIES	21					ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Rodentia	ANCESTRAL SPECIES	17						ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Rodentia_A	ANCESTRAL SPECIES	16						ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00940000158279	ENSGT00940000159742	ENSGT00940000160737	ENSGT00390000000410	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.a.b	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Marmotini	ANCESTRAL SPECIES	12	ENSGT00940000160737	ENSGT00390000000410	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.a.b	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.b	ENSGT00950000182755.b.a.a.b.a.a.l	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Alpin marmot	MODERN SPECIES	24	ENSMMMG00000003867	ENSMMMG00000003860	ENSMMMG00000003852	ENSMMMG00000003843	ATP13A1 (ENSMMMG00000003751)	GMIP (ENSMMMG00000003685)	LPAR2 (ENSMMMG00000003676)	ENSMMMG00000003669	PBX4 (ENSMMMG00000003652)	CILP2 (ENSMMMG00000003635) #17	YJEFN3 (ENSMMMG00000003614) #18	NDUFA13 (ENSMMMG00000003609) #19	TSSK6 (ENSMMMG00000003603)	GATAD2A (ENSMMMG00000003539) #20	MAU2 (ENSMMMG00000003432) #21	SUGP1 (ENSMMMG00000003416) #22	TM6SF2 (ENSMMMG00000003397) #23	HAPLN4 (ENSMMMG00000003386) #24	NCAN (ENSMMMG00000003066) #25	NR2C2AP (ENSMMMG00000003044) #26	RFXANK (ENSMMMG00000003029) #27	BORCS8 (ENSMMMG00000003015) #28	MEF2B (ENSMMMG00000002982) #30	TMEM161A (ENSMMMG00000002937) #31	SLC25A42 (ENSMMMG00000002914) #32	ARMC6 (ENSMMMG00000002877) #33	SUGP2 (ENSMMMG00000002743) #34	HOMER3 (ENSMMMG00000002691) #36	DDX49 (ENSMMMG00000002658) #37	COPE (ENSMMMG00000002634)	CERS1 (ENSMMMG00000002619)
Marmotini_b	ANCESTRAL SPECIES	12	ENSGT00940000160737	ENSGT00390000000410	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.a.b	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.b	ENSGT00950000182755.b.a.a.b.a.a.l	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Arctic ground squirrel	MODERN SPECIES	73	CDC25A (ENSUPAG00010017812)	ENSUPAG00010017839	CAMP (ENSUPAG00010017843)	ENSUPAG00010017852	ENSUPAG00010017854	ENSUPAG00010017861	ATP13A1 (ENSUPAG00010017873)	GMIP (ENSUPAG00010017934)	LPAR2 (ENSUPAG00010017989)	PBX4 (ENSUPAG00010017995)	CILP2 (ENSUPAG00010018008) #17	YJEFN3 (ENSUPAG00010018017) #18	TSSK6 (ENSUPAG00010018027)	GATAD2A (ENSUPAG00010018036) #20	MAU2 (ENSUPAG00010018075) #21	SUGP1 (ENSUPAG00010018104) #22	TM6SF2 (ENSUPAG00010018116) #23	HAPLN4 (ENSUPAG00010018121) #24	NCAN (ENSUPAG00010018127) #25	NR2C2AP (ENSUPAG00010018146) #26	RFXANK (ENSUPAG00010018152) #27	BORCS8 (ENSUPAG00010018165) #28	MEF2B (ENSUPAG00010018172) #30	TMEM161A (ENSUPAG00010018179) #31	SLC25A42 (ENSUPAG00010018191) #32	ARMC6 (ENSUPAG00010018208) #33	SUGP2 (ENSUPAG00010018216) #34	HOMER3 (ENSUPAG00010018230) #36	DDX49 (ENSUPAG00010018246) #37	COPE (ENSUPAG00010018276)	CERS1 (ENSUPAG00010018294)
Squirrel	MODERN SPECIES	196	ENSSTOG00000024015	CDC25A (ENSSTOG00000015144)	ENSSTOG00000034924	CAMP (ENSSTOG00000015157)	ATP13A1 (ENSSTOG00000007205)	GMIP (ENSSTOG00000007176)	LPAR2 (ENSSTOG00000021678)	PBX4 (ENSSTOG00000007166)	ENSSTOG00000019762	CILP2 (ENSSTOG00000026823) #17	YJEFN3 (ENSSTOG00000023979) #18	NDUFA13 (ENSSTOG00000022888) #19	TSSK6 (ENSSTOG00000021351)	GATAD2A (ENSSTOG00000022640) #20	MAU2 (ENSSTOG00000001026) #21	SUGP1 (ENSSTOG00000001020) #22	TM6SF2 (ENSSTOG00000025054) #23	HAPLN4 (ENSSTOG00000007240) #24	NCAN (ENSSTOG00000001012) #25	NR2C2AP (ENSSTOG00000001006) #26	RFXANK (ENSSTOG00000024080) #27	BORCS8 (ENSSTOG00000025422) #28	MEF2B (ENSSTOG00000005895) #30	TMEM161A (ENSSTOG00000005867) #31	SLC25A42 (ENSSTOG00000022047) #32	ARMC6 (ENSSTOG00000012997) #33	SUGP2 (ENSSTOG00000026887) #34	HOMER3 (ENSSTOG00000029095) #36	DDX49 (ENSSTOG00000006749) #37	COPE (ENSSTOG00000006736)	CERS1 (ENSSTOG00000029010)
Eurasian red squirrel	MODERN SPECIES	7	ENSSVLG00005018685	ZNF670 (ENSSVLG00005018638)	ENSSVLG00005018591	ENSSVLG00005018572	ENSSVLG00005018537	ATP13A1 (ENSSVLG00005018497)	GMIP (ENSSVLG00005018416)	LPAR2 (ENSSVLG00005018364)	PBX4 (ENSSVLG00005018272)	CILP2 (ENSSVLG00005018243) #17	YJEFN3 (ENSSVLG00005018175) #18	NDUFA13 (ENSSVLG00005018132) #19	TSSK6 (ENSSVLG00005018119)	GATAD2A (ENSSVLG00005018054) #20	MAU2 (ENSSVLG00005017993) #21	SUGP1 (ENSSVLG00005017843) #22	TM6SF2 (ENSSVLG00005017792) #23	HAPLN4 (ENSSVLG00005017756) #24	ENSSVLG00005017692	NCAN (ENSSVLG00005017503) #25	NR2C2AP (ENSSVLG00005017403) #26	RFXANK (ENSSVLG00005017362) #27	BORCS8 (ENSSVLG00005017305) #28	MEF2B (ENSSVLG00005017215) #30	TMEM161A (ENSSVLG00005017057) #31	SLC25A42 (ENSSVLG00005017005) #32	ARMC6 (ENSSVLG00005016951) #33	SUGP2 (ENSSVLG00005016823) #34	HOMER3 (ENSSVLG00005016701) #36	DDX49 (ENSSVLG00005016654) #37	COPE (ENSSVLG00005016567)
Hystricomorpha	ANCESTRAL SPECIES	47							ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Hystricomorpha_a	ANCESTRAL SPECIES	55	ENSGT00940000157924	ENSGT00390000013811	ENSGT00940000160466	ENSGT00940000161678	ENSGT00940000157246	ENSGT01030000234542.b.b.a.a.a.b	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Hystricomorpha_b	ANCESTRAL SPECIES	66	ENSGT00940000157924	ENSGT00390000013811	ENSGT00940000160466	ENSGT00940000161678	ENSGT00940000157246	ENSGT01030000234542.b.b.a.a.a.b	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Long-tailed chinchilla	MODERN SPECIES	231	TPM4 (ENSCLAG00000006213)	ENSCLAG00000006263	ENSCLAG00000006498	DDX11 (ENSCLAG00000007090)	ENSCLAG00000007229	ENSCLAG00000007428	ATP13A1 (ENSCLAG00000009549)	GMIP (ENSCLAG00000008010)	LPAR2 (ENSCLAG00000016969)	CILP2 (ENSCLAG00000015928) #17	YJEFN3 (ENSCLAG00000016158) #18	NDUFA13 (ENSCLAG00000016915) #19	TSSK6 (ENSCLAG00000018107)	GATAD2A (ENSCLAG00000010160) #20	MAU2 (ENSCLAG00000006535) #21	SUGP1 (ENSCLAG00000003512) #22	TM6SF2 (ENSCLAG00000003633) #23	HAPLN4 (ENSCLAG00000003955) #24	NCAN (ENSCLAG00000004140) #25	NR2C2AP (ENSCLAG00000004378) #26	RFXANK (ENSCLAG00000004632) #27	BORCS8 (ENSCLAG00000004959) #28	MEF2B (ENSCLAG00000007377) #30	TMEM161A (ENSCLAG00000007578) #31	SLC25A42 (ENSCLAG00000008004) #32	ARMC6 (ENSCLAG00000008215) #33	SUGP2 (ENSCLAG00000011375) #34	HOMER3 (ENSCLAG00000011599) #36	DDX49 (ENSCLAG00000012844) #37	COPE (ENSCLAG00000003621)	CERS1 (ENSCLAG00000003897)
Degu	MODERN SPECIES	323			ENSODEG00000011437	ENSODEG00000010301	ENSODEG00000011452	ENSODEG00000019897	ATP13A1 (ENSODEG00000010691)	GMIP (ENSODEG00000010205)	LPAR2 (ENSODEG00000010920)	CILP2 (ENSODEG00000010764) #17	YJEFN3 (ENSODEG00000011107) #18	NDUFA13 (ENSODEG00000013435) #19	TSSK6 (ENSODEG00000020032)	GATAD2A (ENSODEG00000013506) #20	MAU2 (ENSODEG00000012887) #21	SUGP1 (ENSODEG00000011538) #22	TM6SF2 (ENSODEG00000010936) #23	HAPLN4 (ENSODEG00000011689) #24	NCAN (ENSODEG00000011699) #25	NR2C2AP (ENSODEG00000011486) #26	RFXANK (ENSODEG00000013006) #27	BORCS8 (ENSODEG00000013003) #28	MEF2B (ENSODEG00000012357) #30	TMEM161A (ENSODEG00000012343) #31	SLC25A42 (ENSODEG00000012168) #32	ARMC6 (ENSODEG00000012613) #33	SUGP2 (ENSODEG00000012058) #34	HOMER3 (ENSODEG00000014870) #36	DDX49 (ENSODEG00000011203) #37	COPE (ENSODEG00000011547)	CERS1 (ENSODEG00000011214)
Guinea pig	MODERN SPECIES	72						ENSCPOG00000022796	ATP13A1 (ENSCPOG00000011167)	GMIP (ENSCPOG00000011161)	LPAR2 (ENSCPOG00000012652)	CILP2 (ENSCPOG00000007219) #17	YJEFN3 (ENSCPOG00000023842) #18	NDUFA13 (ENSCPOG00000019995) #19	TSSK6 (ENSCPOG00000024320)	GATAD2A (ENSCPOG00000015396) #20	MAU2 (ENSCPOG00000003755) #21	SUGP1 (ENSCPOG00000007797) #22	TM6SF2 (ENSCPOG00000022916) #23	HAPLN4 (ENSCPOG00000023683) #24	NR2C2AP (ENSCPOG00000032927) #26	RFXANK (ENSCPOG00000003121) #27	BORCS8 (ENSCPOG00000036178) #28	MEF2B (ENSCPOG00000032781) #30	TMEM161A (ENSCPOG00000013640) #31	SLC25A42 (ENSCPOG00000013086) #32	ARMC6 (ENSCPOG00000006374) #33	SUGP2 (ENSCPOG00000006372) #34	HOMER3 (ENSCPOG00000004565) #36	DDX49 (ENSCPOG00000013626) #37	COPE (ENSCPOG00000013624)	CERS1 (ENSCPOG00000033783)	GDF1 (ENSCPOG00000031791)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000020580	ENSHGLG00000049921	ENSHGLG00000039559	ENSHGLG00000046812	ENSHGLG00000044603	ENSHGLG00000042271	ENSHGLG00000003184	ENSHGLG00000013806	LPAR2 (ENSHGLG00000035704)	CILP2 (ENSHGLG00000018931) #17	YJEFN3 (ENSHGLG00000019524) #18	NDUFA13 (ENSHGLG00000018628) #19	TSSK6 (ENSHGLG00000020778)	GATAD2A (ENSHGLG00000003176) #20	ENSHGLG00000049094 #21	ENSHGLG00000048186 #22	ENSHGLG00000039617 #34	ENSHGLG00000042474 #22	TM6SF2 (ENSHGLG00000004113) #23	HAPLN4 (ENSHGLG00000003896) #24	NCAN (ENSHGLG00000034381) #25	NR2C2AP (ENSHGLG00000033726) #26	RFXANK (ENSHGLG00000003396) #27	MEF2BNB (ENSHGLG00000047513) #28	ENSHGLG00000003123 #30	TMEM161A (ENSHGLG00000009517) #31	SLC25A42 (ENSHGLG00000008826) #32	ARMC6 (ENSHGLG00000008147) #33	HOMER3 (ENSHGLG00000006851) #36	ENSHGLG00000006789 #37	COPE (ENSHGLG00000006648)
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000039559	ENSHGLG00000046812	ENSHGLG00000044603	ENSHGLG00000042271	ENSHGLG00000003184	ENSHGLG00000013806	LPAR2 (ENSHGLG00000035704)	CILP2 (ENSHGLG00000018931) #17	YJEFN3 (ENSHGLG00000019524) #18	NDUFA13 (ENSHGLG00000018628) #19	TSSK6 (ENSHGLG00000020778)	GATAD2A (ENSHGLG00000003176) #20	ENSHGLG00000049094 #21	ENSHGLG00000048186 #22	ENSHGLG00000039617 #34	ENSHGLG00000042474 #22	TM6SF2 (ENSHGLG00000004113) #23	HAPLN4 (ENSHGLG00000003896) #24	NCAN (ENSHGLG00000034381) #25	NR2C2AP (ENSHGLG00000033726) #26	RFXANK (ENSHGLG00000003396) #27	MEF2BNB (ENSHGLG00000047513) #28	ENSHGLG00000003123 #30	TMEM161A (ENSHGLG00000009517) #31	SLC25A42 (ENSHGLG00000008826) #32	ARMC6 (ENSHGLG00000008147) #33	HOMER3 (ENSHGLG00000006851) #36	ENSHGLG00000006789 #37	COPE (ENSHGLG00000006648)	CERS1 (ENSHGLG00000013716)	GDF1 (ENSHGLG00000042377)
Rodentia_B	ANCESTRAL SPECIES	37						ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Kangaroo rat	MODERN SPECIES	427	Med26 (ENSDORG00000012119)	Cherp (ENSDORG00000027623)	Calr3 (ENSDORG00000013084)	Eps15l1 (ENSDORG00000012303)	Fam32a (ENSDORG00000027872)	Cib3 (ENSDORG00000002313)	Rab8a (ENSDORG00000028823)	ENSDORG00000027508	ENSDORG00000012240	Atp13a1 (ENSDORG00000005185)	Gmip (ENSDORG00000005179)	Lpar2 (ENSDORG00000023437)	Tssk6 (ENSDORG00000008538)	Gatad2a (ENSDORG00000008536) #20	Mau2 (ENSDORG00000004918) #21	ENSDORG00000024315 #22	Tm6sf2 (ENSDORG00000004913) #23	Hapln4 (ENSDORG00000004912) #24	Nr2c2ap (ENSDORG00000001440) #26	Rfxank (ENSDORG00000001449) #27	Borcs8 (ENSDORG00000027906) #28	ENSDORG00000011003 #30	ENSDORG00000010999 #31	Slc25a42 (ENSDORG00000010998) #32	ENSDORG00000004418 #33	Sugp2 (ENSDORG00000011519) #34	ENSDORG00000004302 #36	Ddx49 (ENSDORG00000004301) #37	Cope (ENSDORG00000004298)	ENSDORG00000023557	Upf1 (ENSDORG00000009984)
Myomorpha	ANCESTRAL SPECIES	43						ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Lesser Egyptian jerboa	MODERN SPECIES	127	Abhd8 (ENSJJAG00000010342) #12	Mrpl34 (ENSJJAG00000018808) #13	Dda1 (ENSJJAG00000021059) #14	Ano8 (ENSJJAG00000011527) #15	Plvap (ENSJJAG00000000206)	Ccdc194 (ENSJJAG00000013119)	Mvb12a (ENSJJAG00000019047)	Atp13a1 (ENSJJAG00000010806)	Gmip (ENSJJAG00000013017)	Lpar2 (ENSJJAG00000022302)	Pbx4 (ENSJJAG00000010902)	Ndufa13 (ENSJJAG00000021903) #19	Tssk6 (ENSJJAG00000006030)	Gatad2a (ENSJJAG00000014763) #20	Mau2 (ENSJJAG00000021815) #21	Sugp1 (ENSJJAG00000013477) #22	Tm6sf2 (ENSJJAG00000023997) #23	Hapln4 (ENSJJAG00000016332) #24	Ncan (ENSJJAG00000018295) #25	Nr2c2ap (ENSJJAG00000023882) #26	Mef2b (ENSJJAG00000009955) #30	Slc25a42 (ENSJJAG00000018672) #32	Armc6 (ENSJJAG00000014237) #33	Sugp2 (ENSJJAG00000005264) #34	Homer3 (ENSJJAG00000014551) #36	Cope (ENSJJAG00000017037)	ENSJJAG00000016264	ENSJJAG00000000262	Upf1 (ENSJJAG00000023151)	Comp (ENSJJAG00000011685)	Crtc1 (ENSJJAG00000014073)
Muroidea	ANCESTRAL SPECIES	47			ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	1870		Zfp868 (ENSNGAG00000021523)	Zfp869 (ENSNGAG00000024282)	ENSNGAG00000022982	Zfp866 (ENSNGAG00000012916)	Atp13a1 (ENSNGAG00000021636)	Gmip (ENSNGAG00000012947)	Lpar2 (ENSNGAG00000022925)	Pbx4 (ENSNGAG00000013031)	Cilp2 (ENSNGAG00000011748) #17	Yjefn3 (ENSNGAG00000021673) #18	Ndufa13 (ENSNGAG00000023080) #19	Tssk6 (ENSNGAG00000001299)	Gatad2a (ENSNGAG00000004469) #20	Mau2 (ENSNGAG00000015571) #21	Sugp1 (ENSNGAG00000018965) #22	Tm6sf2 (ENSNGAG00000020192) #23	Hapln4 (ENSNGAG00000014554) #24	Ncan (ENSNGAG00000022597) #25	Nr2c2ap (ENSNGAG00000010770) #26	Rfxank (ENSNGAG00000012986) #27	Borcs8 (ENSNGAG00000023653) #28	Mef2b (ENSNGAG00000010342) #30	Tmem161a (ENSNGAG00000023788) #31	Slc25a42 (ENSNGAG00000023980) #32	Armc6 (ENSNGAG00000021205) #33	Sugp2 (ENSNGAG00000005936) #34	Homer3 (ENSNGAG00000015803) #36	Ddx49 (ENSNGAG00000019673) #37	Cope (ENSNGAG00000022394)	ENSNGAG00000022292
Muroidea_A	ANCESTRAL SPECIES	28	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a	ENSGT00950000182755.b.a.a.b.a.a.k.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.b.a	ENSGT00950000182755.b.a.a.b.a.a.k.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Cricetidae	ANCESTRAL SPECIES	30	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a	ENSGT00950000182755.b.a.a.b.a.a.k.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.b.a	ENSGT00950000182755.b.a.a.b.a.a.k.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Cricetidae_B	ANCESTRAL SPECIES	17	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a	ENSGT00950000182755.b.a.a.b.a.a.k.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.b.a	ENSGT00950000182755.b.a.a.b.a.a.k.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Northern American deer mouse	MODERN SPECIES	8	Zfp868 (ENSPEMG00000006111)	Zfp964 (ENSPEMG00000010305)	Zfp869 (ENSPEMG00000000596)	Zfp963 (ENSPEMG00000011994)	Zfp866 (ENSPEMG00000012624)	Atp13a1 (ENSPEMG00000018771)	Gmip (ENSPEMG00000006786)	Lpar2 (ENSPEMG00000012110)	Pbx4 (ENSPEMG00000010841)	Cilp2 (ENSPEMG00000008010) #17	Yjefn3 (ENSPEMG00000011764) #18	Ndufa13 (ENSPEMG00000007743) #19	Tssk6 (ENSPEMG00000007183)	Gatad2a (ENSPEMG00000012515) #20	Mau2 (ENSPEMG00000016559) #21	Sugp1 (ENSPEMG00000009253) #22	Tm6sf2 (ENSPEMG00000016397) #23	Hapln4 (ENSPEMG00000029211) #24	Ncan (ENSPEMG00000012564) #25	Nr2c2ap (ENSPEMG00000001962) #26	Rfxank (ENSPEMG00000007761) #27	Borcs8 (ENSPEMG00000010340) #28	Mef2b (ENSPEMG00000018054) #30	Tmem161a (ENSPEMG00000016451) #31	Slc25a42 (ENSPEMG00000011354) #32	Armc6 (ENSPEMG00000012468) #33	Sugp2 (ENSPEMG00000009700) #34	Homer3 (ENSPEMG00000016382) #36	Ddx49 (ENSPEMG00000009238) #37	Cope (ENSPEMG00000018557)	ENSPEMG00000012430
Prairie vole	MODERN SPECIES	164	Zfp868 (ENSMOCG00000002776)	Zfp964 (ENSMOCG00000003187)	Zfp869 (ENSMOCG00000001013)	Zfp963 (ENSMOCG00000016227)	Zfp866 (ENSMOCG00000007573)	Atp13a1 (ENSMOCG00000001496)	ENSMOCG00000019025	Lpar2 (ENSMOCG00000014804)	Pbx4 (ENSMOCG00000001326)	Cilp2 (ENSMOCG00000018051) #17	Yjefn3 (ENSMOCG00000019664) #18	Ndufa13 (ENSMOCG00000015070) #19	Tssk6 (ENSMOCG00000007466)	Gatad2a (ENSMOCG00000001060) #20	Mau2 (ENSMOCG00000003213) #21	Sugp1 (ENSMOCG00000014670) #22	Tm6sf2 (ENSMOCG00000018885) #23	Hapln4 (ENSMOCG00000000353) #24	Ncan (ENSMOCG00000020207) #25	Nr2c2ap (ENSMOCG00000003423) #26	Rfxank (ENSMOCG00000021751) #27	ENSMOCG00000008996 #28	Mef2b (ENSMOCG00000000308) #30	Tmem161a (ENSMOCG00000018852) #31	Slc25a42 (ENSMOCG00000012570) #32	Armc6 (ENSMOCG00000014288) #33	Sugp2 (ENSMOCG00000009704) #34	Homer3 (ENSMOCG00000013590) #36	Ddx49 (ENSMOCG00000018690) #37	Cope (ENSMOCG00000014940)	ENSMOCG00000004861
Cricetinae	ANCESTRAL SPECIES	36	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a	ENSGT00950000182755.b.a.a.b.a.a.k.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.b.a	ENSGT00950000182755.b.a.a.b.a.a.k.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Chinese hamster chok1gshd	MODERN SPECIES	184	Zfp868 (ENSCGRG00001024449)	Zfp964 (ENSCGRG00001016061)	Zfp869 (ENSCGRG00001022854)	Zfp963 (ENSCGRG00001021819)	Zfp866 (ENSCGRG00001019443)	Atp13a1 (ENSCGRG00001012808)	Gmip (ENSCGRG00001000197)	Lpar2 (ENSCGRG00001015085)	Pbx4 (ENSCGRG00001014693)	Cilp2 (ENSCGRG00001007338) #17	Yjefn3 (ENSCGRG00001023789) #18	Ndufa13 (ENSCGRG00001022785) #19	Tssk6 (ENSCGRG00001010147)	Gatad2a (ENSCGRG00001018413) #20	Mau2 (ENSCGRG00001009180) #21	Sugp1 (ENSCGRG00001021250) #22	Tm6sf2 (ENSCGRG00001019424) #23	Hapln4 (ENSCGRG00001018509) #24	Ncan (ENSCGRG00001015055) #25	Nr2c2ap (ENSCGRG00001011302) #26	Rfxank (ENSCGRG00001000782) #27	Borcs8 (ENSCGRG00001020163) #28	Mef2b (ENSCGRG00001014460) #30	Tmem161a (ENSCGRG00001022808) #31	Slc25a42 (ENSCGRG00001022045) #32	Armc6 (ENSCGRG00001019296) #33	Sugp2 (ENSCGRG00001018264) #34	Homer3 (ENSCGRG00001014952) #36	Ddx49 (ENSCGRG00001009467) #37	COPE (ENSCGRG00001024248)	ENSCGRG00001019774
Golden Hamster	MODERN SPECIES	831	ENSMAUG00000000837	Zfp868 (ENSMAUG00000007713)	Zfp964 (ENSMAUG00000017867)	Zfp963 (ENSMAUG00000012846)	Zfp866 (ENSMAUG00000013777)	Atp13a1 (ENSMAUG00000022087)	Gmip (ENSMAUG00000020071)	Lpar2 (ENSMAUG00000020957)	Pbx4 (ENSMAUG00000000855)	Cilp2 (ENSMAUG00000005034) #17	Yjefn3 (ENSMAUG00000021666) #18	Ndufa13 (ENSMAUG00000019158) #19	Tssk6 (ENSMAUG00000008397)	Gatad2a (ENSMAUG00000021128) #20	Mau2 (ENSMAUG00000021335) #21	Sugp1 (ENSMAUG00000016683) #22	Tm6sf2 (ENSMAUG00000001556) #23	Hapln4 (ENSMAUG00000011983) #24	Ncan (ENSMAUG00000007276) #25	Nr2c2ap (ENSMAUG00000003921) #26	Rfxank (ENSMAUG00000002477) #27	Borcs8 (ENSMAUG00000014785) #28	Mef2b (ENSMAUG00000006774) #30	Tmem161a (ENSMAUG00000011694) #31	Slc25a42 (ENSMAUG00000018082) #32	Armc6 (ENSMAUG00000011324) #33	Sugp2 (ENSMAUG00000011371) #34	Homer3 (ENSMAUG00000014150) #36	Ddx49 (ENSMAUG00000010235) #37	Cope (ENSMAUG00000016322)	ENSMAUG00000011350
Murinae	ANCESTRAL SPECIES	23	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a	ENSGT00950000182755.b.a.a.b.a.a.k.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.b.a	ENSGT00950000182755.b.a.a.b.a.a.k.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Rat	MODERN SPECIES	7	LOC102551257 (ENSRNOG00000067812)	Zfp964 (ENSRNOG00000042504)	Zfp869 (ENSRNOG00000033351)	Zfp866 (ENSRNOG00000042580)	LOC108348302 (ENSRNOG00000011492)	Atp13a1 (ENSRNOG00000010776)	Gmip (ENSRNOG00000027257)	Lpar2 (ENSRNOG00000010758)	Pbx4 (ENSRNOG00000010736)	Cilp2 (ENSRNOG00000020622) #17	Yjefn3 (ENSRNOG00000039191) #18	Ndufa13 (ENSRNOG00000020602) #19	Tssk6 (ENSRNOG00000020599)	Gatad2a (ENSRNOG00000022173) #20	Mau2 (ENSRNOG00000020526) #21	Sugp1 (ENSRNOG00000052111) #22	Tm6sf2 (ENSRNOG00000042237) #23	Hapln4 (ENSRNOG00000049949) #24	Ncan (ENSRNOG00000048036) #25	Nr2c2ap (ENSRNOG00000022247) #26	Rfxank (ENSRNOG00000033318) #27	Borcs8 (ENSRNOG00000020427) #28	Mef2b (ENSRNOG00000020400) #30	Tmem161a (ENSRNOG00000020390) #31	Slc25a42 (ENSRNOG00000020345) #32	Armc6 (ENSRNOG00000020280) #33	Sugp2 (ENSRNOG00000020269) #34	Homer3 (ENSRNOG00000020229) #36	Ddx49 (ENSRNOG00000022368) #37	Cope (ENSRNOG00000020178)	Cers1 (ENSRNOG00000067124)
Mus	ANCESTRAL SPECIES	6	ENSGT00950000182755.b.a.a.b.a.a.k.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.b.a	ENSGT00940000164244.b	ENSGT00950000182755.b.a.a.b.a.a.k.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Shrew mouse	MODERN SPECIES	10	Zfp964 (MGP_PahariEiJ_G0021576)	Zfp869 (MGP_PahariEiJ_G0021577)	Zfp963 (MGP_PahariEiJ_G0021578)	MGP_PahariEiJ_G0021579	Zfp866 (MGP_PahariEiJ_G0021580)	Atp13a1 (MGP_PahariEiJ_G0021581)	Gmip (MGP_PahariEiJ_G0021582)	Lpar2 (MGP_PahariEiJ_G0021583)	Pbx4 (MGP_PahariEiJ_G0021584)	Cilp2 (MGP_PahariEiJ_G0021585) #17	Yjefn3 (MGP_PahariEiJ_G0021586) #18	Ndufa13 (MGP_PahariEiJ_G0021587) #19	Tssk6 (MGP_PahariEiJ_G0021588)	Gatad2a (MGP_PahariEiJ_G0021589) #20	Mau2 (MGP_PahariEiJ_G0021590) #21	Sugp1 (MGP_PahariEiJ_G0021591) #22	Tm6sf2 (MGP_PahariEiJ_G0021592) #23	Hapln4 (MGP_PahariEiJ_G0021593) #24	Ncan (MGP_PahariEiJ_G0021594) #25	Rfxank (MGP_PahariEiJ_G0021595) #27	Nr2c2ap (MGP_PahariEiJ_G0021596) #26	MGP_PahariEiJ_G0021597 #30	MGP_PahariEiJ_G0021598 #30	Tmem161a (MGP_PahariEiJ_G0021599) #31	Slc25a42 (MGP_PahariEiJ_G0021600) #32	Armc6 (MGP_PahariEiJ_G0021601) #33	Sugp2 (MGP_PahariEiJ_G0021602) #34	Homer3 (MGP_PahariEiJ_G0021603) #36	Ddx49 (MGP_PahariEiJ_G0021604) #37	Cope (MGP_PahariEiJ_G0021605)	MGP_PahariEiJ_G0021606
Mus_A	ANCESTRAL SPECIES	8	ENSGT00950000182755.b.a.a.b.a.a.k.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.b.a	ENSGT00940000164244.b	ENSGT00950000182755.b.a.a.b.a.a.k.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Ryukyu mouse	MODERN SPECIES	17	Zfp964 (MGP_CAROLIEiJ_G0031111)	Zfp869 (MGP_CAROLIEiJ_G0031112)	Zfp963 (MGP_CAROLIEiJ_G0031113)	MGP_CAROLIEiJ_G0031114	Zfp866 (MGP_CAROLIEiJ_G0031115)	Atp13a1 (MGP_CAROLIEiJ_G0031116)	Gmip (MGP_CAROLIEiJ_G0031117)	Lpar2 (MGP_CAROLIEiJ_G0031118)	Pbx4 (MGP_CAROLIEiJ_G0031119)	Cilp2 (MGP_CAROLIEiJ_G0031120) #17	Yjefn3 (MGP_CAROLIEiJ_G0031121) #18	Ndufa13 (MGP_CAROLIEiJ_G0031122) #19	Tssk6 (MGP_CAROLIEiJ_G0031123)	Gatad2a (MGP_CAROLIEiJ_G0031124) #20	Mau2 (MGP_CAROLIEiJ_G0031125) #21	Sugp1 (MGP_CAROLIEiJ_G0031126) #22	Tm6sf2 (MGP_CAROLIEiJ_G0031127) #23	Hapln4 (MGP_CAROLIEiJ_G0031128) #24	Ncan (MGP_CAROLIEiJ_G0031129) #25	Rfxank (MGP_CAROLIEiJ_G0031130) #27	Nr2c2ap (MGP_CAROLIEiJ_G0031131) #26	MGP_CAROLIEiJ_G0031132 #30	MGP_CAROLIEiJ_G0031133 #30	Tmem161a (MGP_CAROLIEiJ_G0031134) #31	Slc25a42 (MGP_CAROLIEiJ_G0031135) #32	Armc6 (MGP_CAROLIEiJ_G0031136) #33	Sugp2 (MGP_CAROLIEiJ_G0031137) #34	Homer3 (MGP_CAROLIEiJ_G0031138) #36	Ddx49 (MGP_CAROLIEiJ_G0031139) #37	Cope (MGP_CAROLIEiJ_G0031140)	MGP_CAROLIEiJ_G0031141
Mus_B	ANCESTRAL SPECIES	6	ENSGT00950000182755.b.a.a.b.a.a.k.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.b.a	ENSGT00940000164244.b	ENSGT00950000182755.b.a.a.b.a.a.k.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
Mouse	MODERN SPECIES	17	Zfp964 (ENSMUSG00000091764)	Zfp869 (ENSMUSG00000054648)	Zfp963 (ENSMUSG00000092260)	Gm20422 (ENSMUSG00000092544)	Zfp866 (ENSMUSG00000043090)	Atp13a1 (ENSMUSG00000031862)	Gmip (ENSMUSG00000036246)	Lpar2 (ENSMUSG00000031861)	Pbx4 (ENSMUSG00000031860)	Cilp2 (ENSMUSG00000044006) #17	Yjefn3 (ENSMUSG00000048967) #18	Ndufa13 (ENSMUSG00000036199) #19	Tssk6 (ENSMUSG00000047654)	Gatad2a (ENSMUSG00000036180) #20	Mau2 (ENSMUSG00000031858) #21	Sugp1 (ENSMUSG00000011306) #22	Tm6sf2 (ENSMUSG00000036151) #23	Hapln4 (ENSMUSG00000007594) #24	Ncan (ENSMUSG00000002341) #25	Rfxank (ENSMUSG00000036120) #27	Nr2c2ap (ENSMUSG00000071078) #26	Borcs8 (ENSMUSG00000002345) #28	Mef2b (ENSMUSG00000079033) #30	Tmem161a (ENSMUSG00000002342) #31	Slc25a42 (ENSMUSG00000002346) #32	Armc6 (ENSMUSG00000002343) #33	Sugp2 (ENSMUSG00000036054) #34	Homer3 (ENSMUSG00000003573) #36	Ddx49 (ENSMUSG00000057788) #37	Cope (ENSMUSG00000055681)	Cers1 (ENSMUSG00000087408)
Mus_C	ANCESTRAL SPECIES	5	ENSGT00950000182755.b.a.a.b.a.a.k.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b	ENSGT00950000182755.b.a.a.b.a.a.k.b.a	ENSGT00940000164244.b	ENSGT00950000182755.b.a.a.b.a.a.k.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT01030000234515.b
spretus	MODERN SPECIES	17	Zfp964 (MGP_SPRETEiJ_G0032229)	Zfp869 (MGP_SPRETEiJ_G0032230)	Zfp963 (MGP_SPRETEiJ_G0032231)	MGP_SPRETEiJ_G0032232	Zfp866 (MGP_SPRETEiJ_G0032233)	Atp13a1 (MGP_SPRETEiJ_G0032234)	Gmip (MGP_SPRETEiJ_G0032235)	Lpar2 (MGP_SPRETEiJ_G0032236)	Pbx4 (MGP_SPRETEiJ_G0032237)	Cilp2 (MGP_SPRETEiJ_G0032238) #17	Yjefn3 (MGP_SPRETEiJ_G0032239) #18	Ndufa13 (MGP_SPRETEiJ_G0032240) #19	Tssk6 (MGP_SPRETEiJ_G0032241)	Gatad2a (MGP_SPRETEiJ_G0032242) #20	Mau2 (MGP_SPRETEiJ_G0032243) #21	Sugp1 (MGP_SPRETEiJ_G0032244) #22	Tm6sf2 (MGP_SPRETEiJ_G0032245) #23	Hapln4 (MGP_SPRETEiJ_G0032246) #24	Ncan (MGP_SPRETEiJ_G0032247) #25	Rfxank (MGP_SPRETEiJ_G0032248) #27	Nr2c2ap (MGP_SPRETEiJ_G0032249) #26	MGP_SPRETEiJ_G0032250 #30	MGP_SPRETEiJ_G0032251 #30	Tmem161a (MGP_SPRETEiJ_G0032252) #31	Slc25a42 (MGP_SPRETEiJ_G0032253) #32	Armc6 (MGP_SPRETEiJ_G0032254) #33	Sugp2 (MGP_SPRETEiJ_G0032255) #34	Homer3 (MGP_SPRETEiJ_G0032256) #36	Ddx49 (MGP_SPRETEiJ_G0032257) #37	Cope (MGP_SPRETEiJ_G0032258)	MGP_SPRETEiJ_G0032259
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	2734									Pbx4 (ENSMSIG00000032030)	Cilp2 (ENSMSIG00000032031) #17	Yjefn3 (ENSMSIG00000032032) #18	Ndufa13 (ENSMSIG00000032033) #19	Tssk6 (ENSMSIG00000032034)	Gatad2a (ENSMSIG00000032035) #20	Mau2 (ENSMSIG00000032036) #21	Sugp1 (ENSMSIG00000032037) #22	Tm6sf2 (ENSMSIG00000032038) #23	Hapln4 (ENSMSIG00000032039) #24	Ncan (ENSMSIG00000032040) #25	Nr2c2ap (ENSMSIG00000032043) #26	Rfxank (ENSMSIG00000032044) #27	Borcs8 (ENSMSIG00000032045) #28	ENSMSIG00000032046 #30	Tmem161a (ENSMSIG00000032047) #31	Slc25a42 (ENSMSIG00000032048) #32	Armc6 (ENSMSIG00000032049) #33	Sugp2 (ENSMSIG00000032050) #34	Homer3 (ENSMSIG00000032051) #36	Ddx49 (ENSMSIG00000032052) #37	Cope (ENSMSIG00000032053)	ENSMSIG00000032054
Steppe mouse	MODERN SPECIES	1033																ENSMSIG00000001784 #22
Lagomorpha	ANCESTRAL SPECIES	270												ENSGT00940000160464	ENSGT01090000261752	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26
Pika	MODERN SPECIES	3990															ENSOPRG00000018947 #21	SUGP1 (ENSOPRG00000004247) #22	ENSOPRG00000018692 #23	HAPLN4 (ENSOPRG00000004236) #24	NCAN (ENSOPRG00000004179) #25	NR2C2AP (ENSOPRG00000004162) #26
Rabbit	DUPLICATION
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	831															ENSOCUG00000011101	ENSOCUG00000024929 #22	ENSOCUG00000024634 #22	ENSOCUG00000036988	ENSOCUG00000037609
Rabbit	MODERN SPECIES	831														ENSOCUG00000011101	ENSOCUG00000024929 #22	ENSOCUG00000024634 #22	ENSOCUG00000036988	ENSOCUG00000037609
Rabbit	MODERN SPECIES	858												TSSK6 (ENSOCUG00000026975)	ENSOCUG00000039262	GATAD2A (ENSOCUG00000017513) #20	MAU2 (ENSOCUG00000002263) #21	ENSOCUG00000038816 #22
Atlantogenata	ANCESTRAL SPECIES	42						ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT00940000162926
Afrotheria	ANCESTRAL SPECIES	45						ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT00940000162926
Afrotheria_a	ANCESTRAL SPECIES	44						ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000000719 #19	ENSGT00940000160464	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478	ENSGT00940000162926
Elephant	MODERN SPECIES	270	ENSLAFG00000028505	ENSLAFG00000003168	KLHL17 (ENSLAFG00000003167)	ENSLAFG00000025891	ENSLAFG00000031243	ENSLAFG00000030867	ATP13A1 (ENSLAFG00000008396)	GMIP (ENSLAFG00000008389)	LPAR2 (ENSLAFG00000008384)	CILP2 (ENSLAFG00000025674) #17	YJEFN3 (ENSLAFG00000009481) #18	NDUFA13 (ENSLAFG00000022064) #19	TSSK6 (ENSLAFG00000027015)	GATAD2A (ENSLAFG00000009470) #20	MAU2 (ENSLAFG00000021412) #21	SUGP1 (ENSLAFG00000017363) #22	TM6SF2 (ENSLAFG00000021853) #23	HAPLN4 (ENSLAFG00000031107) #24	NCAN (ENSLAFG00000015356) #25	NR2C2AP (ENSLAFG00000017559) #26	RFXANK (ENSLAFG00000017554) #27	BORCS8 (ENSLAFG00000031264) #28	ENSLAFG00000026493	MEF2B (ENSLAFG00000029184) #30	TMEM161A (ENSLAFG00000012976) #31	SLC25A42 (ENSLAFG00000003608) #32	ARMC6 (ENSLAFG00000021876) #33	SUGP2 (ENSLAFG00000018646) #34	CRLF1 (ENSLAFG00000008358)	HOMER3 (ENSLAFG00000002936) #36	DDX49 (ENSLAFG00000002934) #37
Hyrax	MODERN SPECIES	6558															MAU2 (ENSPCAG00000014835) #21	SUGP1 (ENSPCAG00000014760) #22	TM6SF2 (ENSPCAG00000014712) #23	HAPLN4 (ENSPCAG00000014625) #24
Xenarthra	ANCESTRAL SPECIES																	ENSGT00410000025695.a #22
Armadillo	MODERN SPECIES	4186																ENSDNOG00000045088 #22
Anura	ANCESTRAL SPECIES	119		ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000162805	ENSGT00390000007336 #12	ENSGT00390000012240 #13	ENSGT00390000007029 #14	ENSGT00940000157019 #15	ENSGT00390000016851 #16	ENSGT00390000006166	ENSGT00970000194286	ENSGT00390000008152.B.a #17	ENSGT00390000007227.b #18	ENSGT00390000004097.a #20	ENSGT00390000012198 #21	ENSGT00410000025695.a #22	ENSGT00390000012913.a #23	ENSGT00940000160926 #24	ENSGT00940000158649 #25	ENSGT00390000017748 #26	ENSGT00940000160753 #27	ENSGT00390000014856 #28	ENSGT00940000165199 #29	ENSGT00940000160699 #30	ENSGT00390000000672.a.a #31	ENSGT00940000158163 #32	ENSGT00390000002913 #33	ENSGT00410000025695.b #34	ENSGT00940000158081 #36	ENSGT00730000111231 #37	ENSGT00390000003478
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000016620	ENSLLEG00000016656	ENSLLEG00000016943	ENSLLEG00000016967	ENSLLEG00000017004	ENSLLEG00000017036	UPF1 (ENSLLEG00000017156)	AP1M1 (ENSLLEG00000018290)	CIB3 (ENSLLEG00000019959)	ENSLLEG00000020029	RAB8A (ENSLLEG00000020123)	TPM4 (ENSLLEG00000020308)	ENSLLEG00000020874	GATAD2A (ENSLLEG00000020909) #20	MAU2 (ENSLLEG00000021086) #21	SUGP1 (ENSLLEG00000021601) #22	TM6SF2 (ENSLLEG00000021856) #23	HAPLN4 (ENSLLEG00000022101) #24	NCAN (ENSLLEG00000022173) #25	ENSLLEG00000022581	ENSLLEG00000022604	NR2C2AP (ENSLLEG00000022668) #26	RFXANK (ENSLLEG00000022726) #27	BORCS8 (ENSLLEG00000022858) #28	ENSLLEG00000022900 #29	MEF2B (ENSLLEG00000022939) #30	TMEM161A (ENSLLEG00000023032) #31	SLC25A42 (ENSLLEG00000023359) #32	ENSLLEG00000023562	ARMC6 (ENSLLEG00000023586) #33	SUGP2 (ENSLLEG00000023662) #34
Frog	MODERN SPECIES		rnf170 (ENSXETG00000027376)	hook3 (ENSXETG00000010213)	trabd2a (ENSXETG00000013102)	abhd8 (ENSXETG00000013090) #12	MRPL34 (ENSXETG00000036912) #13	dda1 (ENSXETG00000013089) #14	ano8 (ENSXETG00000013077) #15	gtpbp3 (ENSXETG00000013066) #16	ENSXETG00000042229	plvap (ENSXETG00000036707)	cilp2 (ENSXETG00000013064) #17	yjefn3 (ENSXETG00000013061) #18	exosc3 (ENSXETG00000013060)	gatad2a (ENSXETG00000013053) #20	mau2 (ENSXETG00000013046) #21	sugp1 (ENSXETG00000013044) #22	borcs8 (ENSXETG00000040421) #28	rfxank (ENSXETG00000013042) #27	nr2c2ap (ENSXETG00000037690) #26	ncan (ENSXETG00000014328) #25	hapln4 (ENSXETG00000014330) #24	tm6sf2 (ENSXETG00000014331) #23	tmem221 (ENSXETG00000036930) #29	tmem161a (ENSXETG00000014335) #31	slc25a42 (ENSXETG00000014336) #32	armc6 (ENSXETG00000014338) #33	sugp2 (ENSXETG00000030450) #34	micos13 (ENSXETG00000039864)	hsd11b1l (ENSXETG00000014342)	celf5 (ENSXETG00000014344)	s1pr4 (ENSXETG00000044238)