Euteleosteomorpha ANCESTRAL SPECIES 159 ENSGT01100000263614 ENSGT00940000161135 ENSGT00950000182841.a ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00940000157917.a.a #24 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00940000160292 ENSGT00940000153222.a.b.a ENSGT00940000154700 ENSGT00950000182838.A.a.a ENSGT00940000167194 ENSGT00940000160972 ENSGT00940000158268.b ENSGT00440000037417.B.a ENSGT00390000014700.b.a.b.b.a Protacanthopterygii ANCESTRAL SPECIES 54 ENSGT00930000151196.a.b ENSGT00940000161121 ENSGT01050000244900.a.b.f.b ENSGT00940000167425 ENSGT00940000164717.a ENSGT00940000164903.a.e ENSGT00940000167839 ENSGT00940000165368 ENSGT00940000167630 ENSGT00940000166481 ENSGT00390000002069 ENSGT00940000160609.e ENSGT01060000248595.b.a.b.b.a.b ENSGT00940000164511.C #19 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00940000157917.a.a.b #24 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00940000159275.b ENSGT00940000154664.h.j Salmoninae ANCESTRAL SPECIES 767 ENSGT00940000164511.C.k.b.b #19 ENSGT00950000182818.A.o #21 ENSGT00940000162682.B.b #22 ENSGT00940000157917.a.a.b.b #24 ENSGT00530000064085.d.b #25 ENSGT00390000008812.b.b.b.b #26 ENSGT00530000063301.a.a.c.b.a.b #29 ENSGT00940000158951.f.c #30 ENSGT00940000165079.b.b #31 ENSGT00940000163377.a.b.b.a.b #32 Salmoninae_a ANCESTRAL SPECIES 120 ENSGT00950000182841.a.m.b ENSGT00940000166981.e.a #18 ENSGT00940000160609.f.e ENSGT00940000164511.C.k.b.b #19 ENSGT00950000182818.A.o.a ##21 ENSGT00940000162682.B.b #22 ENSGT00940000157917.a.a.b.b #24 ENSGT00530000064085.d.b #25 ENSGT00390000008812.b.b.b.b #26 ENSGT00530000063301.a.a.c.b.a.b #29 ENSGT00940000158951.f.c #30 ENSGT00940000165079.b.b #31 ENSGT00940000163377.a.b.b.a.b #32 ENSGT00940000159252.b.b.b ENSGT00940000160492.f #33 ENSGT00950000183143.c.b.m ENSGT00390000002810.l ENSGT00550000074873.ob.a.a.b.b #34 ENSGT01030000234629.E.a.b.c #35 ENSGT00940000153496.a.a.r.b.a #37 ENSGT00940000153496.a.a.r.a ##37 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000182841.a.m.b ENSGT00940000166981.e.a #18 ENSGT00940000164511.C.k.b.b #19 ENSGT00950000182818.A.o.a ##21 ENSGT00950000182818.A.o.b #21 ENSGT00940000162682.B.b #22 ENSGT00940000157917.a.a.b.b #24 ENSGT00530000064085.d.b #25 ENSGT00390000008812.b.b.b.b #26 ENSGT00530000063301.a.a.c.b.a.b #29 ENSGT00940000158951.f.c #30 ENSGT00940000165079.b.b #31 ENSGT00940000163377.a.b.b.a.b #32 ENSGT00940000160492.f #33 ENSGT00550000074873.ob.a.a.b.b #34 ENSGT01030000234629.E.a.b.c #35 ENSGT00940000153496.a.a.r.b.a #37 ENSGT00390000007652.c ENSGT00390000003337.f.b ENSGT00390000006617.f ENSGT00940000158837.g.b.b Rainbow trout MODERN SPECIES 22 ENSOMYG00000021406 #18 ENSOMYG00000046940 #19 ENSOMYG00000071216 #20 ENSOMYG00000046921 #21 ENSOMYG00000046919 #22 ENSOMYG00000053599 #23 ENSOMYG00000046850 #24 ENSOMYG00000046756 #25 ENSOMYG00000063379 #26 ENSOMYG00000053810 #27 ENSOMYG00000051375 #28 ENSOMYG00000046708 #29 ENSOMYG00000046701 #30 ENSOMYG00000046697 #31 ENSOMYG00000046695 #32 ENSOMYG00000046626 #33 ENSOMYG00000046565 #34 ENSOMYG00000046560 #35 ENSOMYG00000057237 #36 mapk8ip3 (ENSOMYG00000046505) #37 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00950000182841.a.m.b ENSGT00940000166981.e.a #18 ENSGT00940000160609.f.e ENSGT00940000164511.C.k.b.b #19 ENSGT00950000182818.A.o.a ##21 ENSGT00940000162682.B.b #22 ENSGT00940000157917.a.a.b.b #24 ENSGT00530000064085.d.b #25 ENSGT00390000008812.b.b.b.b #26 ENSGT00530000063301.a.a.c.b.a.b #29 ENSGT00940000158951.f.c #30 ENSGT00940000165079.b.b #31 ENSGT00940000163377.a.b.b.a.b #32 ENSGT00940000160492.f #33 ENSGT00550000074873.ob.a.a.b.b #34 ENSGT01030000234629.E.a.b.c #35 ENSGT00940000153496.a.a.r.b.a #37 ENSGT00390000007652.c ENSGT00390000003337.f.b ENSGT00390000006617.f ENSGT00940000158837.g.b.b Chinook salmon MODERN SPECIES ENSOTSG00005010771 WDFY4 (ENSOTSG00005010761) vstm4a (ENSOTSG00005010759) drgx (ENSOTSG00005010758) ENSOTSG00005010757 sprn (ENSOTSG00005010756) ENSOTSG00005010755 ENSOTSG00005010754 SRF (ENSOTSG00005010753) ENSOTSG00005010751 ENSOTSG00005010749 syt5a (ENSOTSG00005010748) #18 tnnt1 (ENSOTSG00005010747) ENSOTSG00005010733 #19 prl2 (ENSOTSG00005010731) ##21 dusp3b (ENSOTSG00005010730) #22 THRA (ENSOTSG00005009816) #24 nsfa (ENSOTSG00005009601) #25 cdk5r1a (ENSOTSG00005009599) #26 PSMD11 (ENSOTSG00005009598) #29 DLX3 (ENSOTSG00005009596) #30 dlx4a (ENSOTSG00005009595) #31 ENSOTSG00005009594 #32 SEZ6L2 (ENSOTSG00005009418) #33 ATP6V0C (ENSOTSG00005009413) #34 spsb3a (ENSOTSG00005009412) #35 mapk8ip3 (ENSOTSG00005009375) #37 CRAMP1 (ENSOTSG00005009373) tmem11 (ENSOTSG00005009371) ENSOTSG00005009357 ENSOTSG00005009356 Coho salmon MODERN SPECIES 1 COLGALT1 (ENSOKIG00005035949) ENSOKIG00005035844 ENSOKIG00005035795 atp13a1 (ENSOKIG00005035082) pbx4 (ENSOKIG00005034919) ENSOKIG00005034731 ENSOKIG00005034693 STXBP2 (ENSOKIG00005034430) ENSOKIG00005034389 XAB2 (ENSOKIG00005033079) ENSOKIG00005032994 #18 ENSOKIG00005032824 ENSOKIG00005032481 #19 ENSOKIG00005032442 ENSOKIG00005032418 #21 dusp3b (ENSOKIG00005032411) #22 THRA (ENSOKIG00005032167) #24 NSF (ENSOKIG00005030932) #25 CDK5R1 (ENSOKIG00005030823) #26 PSMD11 (ENSOKIG00005030783) #29 DLX3 (ENSOKIG00005030773) #30 ENSOKIG00005030742 #31 ENSOKIG00005030686 #32 SEZ6L2 (ENSOKIG00005030576) #33 SPSB3 (ENSOKIG00005030546) #35 mapk8ip3 (ENSOKIG00005029868) #37 ENSOKIG00005029815 #34 jpt2 (ENSOKIG00005029781) CRAMP1 (ENSOKIG00005029739) tmem11 (ENSOKIG00005029724) ENSOKIG00005029359 Salmo ANCESTRAL SPECIES 64 ENSGT00940000166981.e.a #18 ENSGT00940000160609.f.e ENSGT00940000164511.C.k.b.b #19 ENSGT00950000182818.A.o.a ##21 ENSGT00940000162682.B.b #22 ENSGT00940000157917.a.a.b.b #24 ENSGT00530000064085.d.b #25 ENSGT00390000008812.b.b.b.b #26 ENSGT00530000063301.a.a.c.b.a.b #29 ENSGT00940000158951.f.c #30 ENSGT00940000165079.b.b #31 ENSGT00940000163377.a.b.b.a.b #32 ENSGT00940000159252.b.b.b ENSGT00940000160492.f #33 ENSGT00950000183143.c.b.m ENSGT00390000002810.l ENSGT00550000074873.ob.a.a.b.b #34 ENSGT01030000234629.E.a.b.c #35 ENSGT00940000153496.a.a.r.a ##37 ENSGT00390000007652.c Atlantic salmon MODERN SPECIES 15 ENSSSAG00000031377 #18 ENSSSAG00000015328 ENSSSAG00000065652 ENSSSAG00000034084 #19 ENSSSAG00000031162 ##21 ENSSSAG00000088009 #22 ENSSSAG00000057762 #24 ENSSSAG00000102800 ENSSSAG00000041588 #25 ENSSSAG00000083996 #26 ENSSSAG00000120584 #29 ENSSSAG00000082098 #30 HEBP2 (ENSSSAG00000045682) #32 ENSSSAG00000045730 ENSSSAG00000045889 #33 ENSSSAG00000052647 ENSSSAG00000102969 ENSSSAG00000106267 ENSSSAG00000095306 #34 ENSSSAG00000114586 #35 mapk8ip3 (ENSSSAG00000053437) ##37 River trout MODERN SPECIES 33 C4orf54 (ENSSTUG00000021705) mttp (ENSSTUG00000021829) ENSSTUG00000023319 tspan5b (ENSSTUG00000023336) rps6 (ENSSTUG00000023472) ENSSTUG00000023560 dnaja1 (ENSSTUG00000023788) ENSSTUG00000023848 ENSSTUG00000023852 ENSSTUG00000023865 syt5a (ENSSTUG00000023918) #18 tnnt1 (ENSSTUG00000023957) ENSSTUG00000024016 ENSSTUG00000024119 #19 prl (ENSSTUG00000025286) ##21 dusp3b (ENSSTUG00000025300) #22 THRA (ENSSTUG00000025312) #24 nsfa (ENSSTUG00000025460) #25 cdk5r1a (ENSSTUG00000027621) #26 PSMD11 (ENSSTUG00000027628) #29 DLX3 (ENSSTUG00000027720) #30 dlx4a (ENSSTUG00000027729) #31 ENSSTUG00000027742 #32 ENSSTUG00000027796 ENSSTUG00000027813 SEZ6L2 (ENSSTUG00000027824) #33 kctd13 (ENSSTUG00000027924) xpo6 (ENSSTUG00000027955) ENSSTUG00000029153 ATP6V0C (ENSSTUG00000029160) #34 spsb3a (ENSSTUG00000029182) #35 Huchen MODERN SPECIES 148 ENSHHUG00000035952 ENSHHUG00000035967 cdipt (ENSHHUG00000035972) ENSHHUG00000035986 ENSHHUG00000036192 ENSHHUG00000036197 aldh16a1 (ENSHHUG00000036204) ENSHHUG00000036222 syt5a (ENSHHUG00000036574) #18 tnnt1 (ENSHHUG00000036584) ENSHHUG00000036592 ENSHHUG00000036645 ENSHHUG00000036652 #19 ENSHHUG00000036765 prl (ENSHHUG00000036766) #21 dusp3b (ENSHHUG00000036821) #22 THRA (ENSHHUG00000036832) ##24 Acanthomorphata ANCESTRAL SPECIES 232 ENSGT00940000161135 ENSGT00950000182841.a ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 Euacanthomorphacea ANCESTRAL SPECIES 118 ENSGT00940000161135 ENSGT00950000182841.a ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 Percomorphaceae ANCESTRAL SPECIES 3 ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00390000006679.b ENSGT00940000156584.e.b ENSGT00940000174909 ENSGT00390000016209 ENSGT00940000160534 ENSGT00950000183197.a ENSGT00940000156447.a.b ENSGT00940000159997 Percomorphaceae_B ANCESTRAL SPECIES 2 ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00390000006679.b ENSGT00940000173491 ENSGT00940000177154 ENSGT00940000156584.e.b ENSGT00940000155311.A.a ENSGT00390000016209 ENSGT00940000160534 ENSGT00950000183197.a Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000162682.B.b #22 Eupercaria ANCESTRAL SPECIES 3 ENSGT00390000000022.a ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00390000006679.b ENSGT00940000173491 ENSGT00940000177154 ENSGT00940000156584.e.b ENSGT00940000164625.o.b.a.b ENSGT00940000164625.o.a ENSGT00940000155311.A.a ENSGT00390000016209 Eupecaria_A ANCESTRAL SPECIES 5 ENSGT00390000000022.a ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00390000006679.b ENSGT00940000173491 ENSGT00940000177154 ENSGT00940000156584.e.b ENSGT00940000164625.o.b.a.b ENSGT00940000164625.o.a ENSGT00940000155311.A.a ENSGT00390000016209 Eupecaria_B ANCESTRAL SPECIES ENSGT00390000000022.a ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00390000006679.b ENSGT00940000173491 ENSGT00940000177154 ENSGT00940000156584.e.b ENSGT00940000164625.o.b.a.b ENSGT00940000164625.o.a ENSGT00940000155311.A.a ENSGT00390000016209 Eupecaria_C ANCESTRAL SPECIES 17 ENSGT00390000000022.a ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00390000006679.b ENSGT00940000173491 ENSGT00940000163460.a.a.b ENSGT00940000156584.e.b ENSGT00940000177241.e ENSGT00940000174883 ENSGT00940000164625.o.a ENSGT00940000155311.A.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 26 ENSGT00390000000022.a ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00390000006679.b ENSGT00940000173491 ENSGT00940000163460.a.a.b ENSGT00940000156584.e.b ENSGT00940000174883 ENSGT00940000164625.o.a ENSGT00940000155311.A.a ENSGT00390000016209 European seabass MODERN SPECIES 21 carhsp1 (ENSDLAG00005018917) nat15 (ENSDLAG00005018922) dnase1 (ENSDLAG00005027246) eci1 (ENSDLAG00005018955) ENSDLAG00005018972 ENSDLAG00005019012 ENSDLAG00005019052 aldh16a1 (ENSDLAG00005020092) fthl31 (ENSDLAG00005026383) syt5a (ENSDLAG00005020187) #18 tnnt1 (ENSDLAG00005018111) pih1d1 (ENSDLAG00005034590) ENSDLAG00005020330 ENSDLAG00005021039 #19 prl (ENSDLAG00005021555) #21 dusp3b (ENSDLAG00005015143) #22 ENSDLAG00005015185 ##24 ENSDLAG00005032908 ENSDLAG00005016002 nsfa (ENSDLAG00005016019) #25 ENSDLAG00005031697 #26 ENSDLAG00005017138 ENSDLAG00005032181 #29 ENSDLAG00005017346 #31 ENSDLAG00005032733 ENSDLAG00005033811 ENSDLAG00005033367 ENSDLAG00005030687 ENSDLAG00005033637 ENSDLAG00005015851 ENSDLAG00005024545 Large yellow croaker MODERN SPECIES 483 oclnb (ENSLCRG00005014280) sdf2l1 (ENSLCRG00005014283) marveld2b (ENSLCRG00005014285) ENSLCRG00005014286 syt5a (ENSLCRG00005014287) #18 fthl27 (ENSLCRG00005014290) aldh16a1 (ENSLCRG00005014294) ENSLCRG00005014300 ENSLCRG00005015490 ENSLCRG00005015492 eci1 (ENSLCRG00005015495) dnase1 (ENSLCRG00005015503) dnase1 (ENSLCRG00005015504) nat15 (ENSLCRG00005015506) carhsp1 (ENSLCRG00005015508) dusp3b (ENSLCRG00005015510) #22 thraa (ENSLCRG00005015522) ##24 nsfa (ENSLCRG00005015738) #25 cdk5r1a (ENSLCRG00005017151) #26 rpain (ENSLCRG00005017152) PSMD11 (ENSLCRG00005017156) #29 DLX3 (ENSLCRG00005017174) #30 ENSLCRG00005017175 #31 nags (ENSLCRG00005017176) ENSLCRG00005017177 ENSLCRG00005017178 coa3b (ENSLCRG00005017181) col1a1a (ENSLCRG00005017192) ENSLCRG00005019213 ENSLCRG00005019214 ENSLCRG00005019215 Gilthead seabream MODERN SPECIES 15 nat15 (ENSSAUG00010021540) dnase1 (ENSSAUG00010021537) eci1 (ENSSAUG00010021536) ENSSAUG00010021370 ENSSAUG00010021365 ENSSAUG00010021362 ENSSAUG00010019937 aldh16a1 (ENSSAUG00010019869) fthl31 (ENSSAUG00010019861) syt5a (ENSSAUG00010019859) #18 sTnT1 (ENSSAUG00010019858) pih1d1 (ENSSAUG00010019855) ENSSAUG00010018348 ENSSAUG00010018270 #19 prl (ENSSAUG00010018269) #21 dusp3b (ENSSAUG00010018268) #22 thraa (ENSSAUG00010017310) ##24 nsfa (ENSSAUG00010017283) #25 cdk5r1a (ENSSAUG00010017277) #26 rpain (ENSSAUG00010026054) PSMD11 (ENSSAUG00010026051) #29 DLX3 (ENSSAUG00010026049) #30 ENSSAUG00010026048 #31 nags (ENSSAUG00010026047) ENSSAUG00010026046 ENSSAUG00010026045 coa3b (ENSSAUG00010026043) col1a1a (ENSSAUG00010019190) ENSSAUG00010018971 pex12 (ENSSAUG00010018968) HDAC5 (ENSSAUG00010017838) Perciformes ANCESTRAL SPECIES 1 ENSGT00390000000022.a ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00390000006679.b ENSGT00940000173491 ENSGT00940000177154 ENSGT00940000156584.e.b ENSGT00940000164625.o.b.a.b ENSGT00940000155311.A.a ENSGT00390000016209 ENSGT00940000160534 Perciformes_a ANCESTRAL SPECIES 1 ENSGT00390000000022.a ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00390000006679.b ENSGT00940000173491 ENSGT00940000156584.e.b ENSGT00940000164625.o.b.a.b ENSGT00940000155311.A.a ENSGT00390000016209 ENSGT00940000160534 ENSGT00950000183197.a Pike perch MODERN SPECIES 186 ppm1f (ENSSLUG00000019793) ENSSLUG00000017966 ENSSLUG00000017855 #19 prl (ENSSLUG00000017842) #21 dusp3b (ENSSLUG00000017833) #22 thraa (ENSSLUG00000017093) ##24 nsfa (ENSSLUG00000015251) #25 CDK5R1 (ENSSLUG00000015146) #26 JUP (ENSSLUG00000011733) rbfox1 (ENSSLUG00000011578) Cottioidei ANCESTRAL SPECIES 1 ENSGT00390000005584 ENSGT00390000005605 ENSGT00940000154819.a.b.c.a ENSGT00940000156887.a ENSGT00530000063000.a.a.b.i ENSGT00940000157700.d ENSGT00950000183144.B ENSGT00940000161195.a.a ENSGT00940000160152 ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00940000155510 ENSGT00940000157917.b ##24 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00940000164506.b.b ENSGT00940000160257 ENSGT00940000167287 ENSGT00940000160315 ENSGT00940000157552.s.b ENSGT00390000016298.a ENSGT00390000000053.b ENSGT00940000159680 ENSGT01010000222313.A.b.a.c ENSGT00940000158145.b ENSGT00940000169385 Stickleback MODERN SPECIES 10 spc24 (ENSGACG00000006733) kri1 (ENSGACG00000006712) ldlra (ENSGACG00000006705) smarca4a (ENSGACG00000006691) ENSGACG00000006688 MAST1 (ENSGACG00000006669) rtbdn (ENSGACG00000006658) junbb (ENSGACG00000006654) hook2 (ENSGACG00000006640) syt5a (ENSGACG00000006630) #18 tnnt1 (ENSGACG00000006626) pih1d1 (ENSGACG00000006615) ENSGACG00000006606 ENSGACG00000006598 #19 prl (ENSGACG00000006561) #21 dusp3b (ENSGACG00000006555) #22 ENSGACG00000006554 thraa (ENSGACG00000006540) ##24 nsfa (ENSGACG00000006514) #25 CDK5R1 (ENSGACG00000006504) #26 tspan35 (ENSGACG00000006494) ZNF653 (ENSGACG00000006483) swsap1 (ENSGACG00000006482) epor (ENSGACG00000006477) rab3db (ENSGACG00000006453) tmem205 (ENSGACG00000006448) elof1 (ENSGACG00000006444) CNN1 (ENSGACG00000006412) plppr2a (ENSGACG00000006409) ENSGACG00000006406 ENSGACG00000006401 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00940000162682.B.b #22 Carangaria ANCESTRAL SPECIES ENSGT00940000162682.B.b #22 Carangaria_A ANCESTRAL SPECIES 12 ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00940000177154 ENSGT00970000198135 ENSGT00940000156584.e.b ENSGT00940000155311.A.a ENSGT00390000016209 ENSGT00940000160534 ENSGT00950000183197.a ENSGT00940000156447.a.b Seriola ANCESTRAL SPECIES 23 ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000004690.a.a ENSGT00940000166711 ENSGT00390000003628.a.b ENSGT00940000164286.j.b.a.a.a ENSGT00940000163871.b ENSGT00940000155348.B.c ENSGT00940000160643.i ENSGT00940000168246 ENSGT01030000234785 Greater amberjack MODERN SPECIES 50 dnase1 (ENSSDUG00000007677) eci1 (ENSSDUG00000007662) ENSSDUG00000007480 ENSSDUG00000007430 ENSSDUG00000007417 ENSSDUG00000007362 aldh16a1 (ENSSDUG00000007340) fthl31 (ENSSDUG00000007323) syt5a (ENSSDUG00000007236) #18 tnnt1 (ENSSDUG00000007148) pih1d1 (ENSSDUG00000007123) ENSSDUG00000007071 ENSSDUG00000007024 #19 si:dkey-16p21.8 (ENSSDUG00000007015) prl (ENSSDUG00000006996) #21 dusp3b (ENSSDUG00000006978) #22 thraa (ENSSDUG00000006951) ##24 nsfa (ENSSDUG00000006845) #25 cdk5r1a (ENSSDUG00000006827) #26 rpain (ENSSDUG00000006821) PSMD11 (ENSSDUG00000006787) #29 DLX3 (ENSSDUG00000006765) #30 ENSSDUG00000006757 #31 ENSSDUG00000006740 rpl23 (ENSSDUG00000006698) ENSSDUG00000006658 smarce1 (ENSSDUG00000006627) ENSSDUG00000006614 ENSSDUG00000006592 mpp2a (ENSSDUG00000006569) pyya (ENSSDUG00000006560) Yellowtail amberjack MODERN SPECIES 2955 dnase1 (ENSSLDG00000016089) eci1 (ENSSLDG00000016059) ENSSLDG00000015999 ENSSLDG00000015890 ENSSLDG00000015877 ENSSLDG00000015812 aldh16a1 (ENSSLDG00000015707) fthl31 (ENSSLDG00000015658) syt5a (ENSSLDG00000015628) #18 tnnt1 (ENSSLDG00000015604) pih1d1 (ENSSLDG00000015582) ENSSLDG00000015534 ENSSLDG00000015474 #19 si:dkey-16p21.8 (ENSSLDG00000015459) prl (ENSSLDG00000014273) #21 dusp3b (ENSSLDG00000013974) #22 thraa (ENSSLDG00000013953) ##24 nsfa (ENSSLDG00000013833) #25 cdk5r1a (ENSSLDG00000013777) #26 rpain (ENSSLDG00000013756) PSMD11 (ENSSLDG00000013717) #29 DLX3 (ENSSLDG00000013683) #30 ENSSLDG00000013663 #31 ENSSLDG00000013653 ENSSLDG00000013635 rpl23 (ENSSLDG00000013573) ENSSLDG00000013555 smarce1 (ENSSLDG00000013531) ENSSLDG00000013513 ENSSLDG00000013486 mpp2a (ENSSLDG00000013449) Barramundi perch MODERN SPECIES 435 ENSLCAG00010018294 ENSLCAG00010018168 #19 prl (ENSLCAG00010018133) #21 dusp3b (ENSLCAG00010018132) #22 thraa (ENSLCAG00010018125) ##24 nsfa (ENSLCAG00010017941) #25 cdk5r1a (ENSLCAG00010017907) #26 rpain (ENSLCAG00010017903) PSMD11 (ENSLCAG00010017874) #29 DLX3 (ENSLCAG00010017862) #30 ENSLCAG00010017861 #31 nags (ENSLCAG00010017859) Anabantaria ANCESTRAL SPECIES ENSGT00940000162682.B.b #22 Zig-zag eel MODERN SPECIES 22 ENSMAMG00000017875 ENSMAMG00000017850 ENSMAMG00000017838 ENSMAMG00000017792 ENSMAMG00000017736 ENSMAMG00000017691 JMJD6 (ENSMAMG00000017683) ENSMAMG00000025844 ENSMAMG00000024527 ENSMAMG00000017633 ENSMAMG00000025220 ENSMAMG00000024437 ENSMAMG00000017598 ENSMAMG00000017590 ENSMAMG00000028217 ENSMAMG00000017579 #22 ENSMAMG00000017557 ENSMAMG00000017550 ENSMAMG00000017542 #31 ENSMAMG00000017532 #30 ENSMAMG00000017496 #29 ENSMAMG00000017466 #26 ENSMAMG00000017422 #25 ENSMAMG00000024678 ENSMAMG00000017402 ##24 ENSMAMG00000017365 prl (ENSMAMG00000017357) #21 ENSMAMG00000017315 #19 ENSMAMG00000017238 pih1d1 (ENSMAMG00000017192) tnnt1 (ENSMAMG00000017171) Ovalentaria ANCESTRAL SPECIES 1 ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a.p ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT01100000263513.a.a.b.b.b.b.b.a.b.b ENSGT00390000006679.b ENSGT00940000173491 ENSGT00940000177154 ENSGT00940000156584.e.b ENSGT00940000155311.A.a ENSGT00390000016209 ENSGT00940000160534 Ovalentaria_B ANCESTRAL SPECIES ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a.p ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT01100000263513.a.a.b.b.b.b.b.a.b.b ENSGT00390000006679.b.n ENSGT00940000173491 ENSGT00940000177154 ENSGT00940000156584.e.b ENSGT00940000164625.o.a ENSGT00940000155311.A.a ENSGT00390000016209 Cichlidae ANCESTRAL SPECIES 117 ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A.s #21 ENSGT00950000182818.A.t #21 ENSGT00940000162682.B.b #22 Pseudocrenilabrinae ANCESTRAL SPECIES 234 ENSGT00950000182818.A.t #21 ENSGT00940000162682.B.b #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES 38 ENSGT00530000064157.b ENSGT00390000012078.a.b ENSGT00950000182916.a.b.a.a.a.b.a.b ENSGT00390000013719 ENSGT00950000182917.a.b.b ENSGT00950000182841.a.o.a.c.a ENSGT01060000248575.D.c.b.b.a.l ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A.s #21 ENSGT00950000182818.A.t #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00390000006679.b.m.a ENSGT00390000006679.b.n.a.b ENSGT00390000006679.b.n.b.a ENSGT00940000173491 ENSGT00390000006679.b.n.a.a ENSGT00940000156584.e.b ENSGT00940000164625.o.a ENSGT00940000155311.A.a Haplochromini ANCESTRAL SPECIES 57 ENSGT00530000064157.b ENSGT00390000012078.a.b.i ENSGT00950000182916.a.b.a.a.a.b.a.b ENSGT00390000013719 ENSGT00950000182917.a.b.b ENSGT00950000182841.a.o.a.c.a.a ENSGT01060000248575.D.c.b.b.a.l ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A.s #21 ENSGT00950000182818.A.t #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00390000006679.b.m.a ENSGT00390000006679.b.n.a.b ENSGT00390000006679.b.n.b.a ENSGT00940000173491 ENSGT00940000177154.c ENSGT00390000006679.b.n.a.a ENSGT00940000156584.e.b ENSGT00940000164625.o.a Haplochromini_A ANCESTRAL SPECIES 43 ENSGT00940000157022 ENSGT00530000064157.b ENSGT00390000012078.a.b.i ENSGT00950000182916.a.b.a.a.a.b.a.b ENSGT00390000013719 ENSGT00950000182917.a.b.b ENSGT01060000248575.D.c.b.b.a.l ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A.s #21 ENSGT00950000182818.A.t #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00390000006679.b.m.a ENSGT00940000179732 ENSGT00390000006679.b.n.b.a ENSGT00940000173491 ENSGT00940000177154.c ENSGT00390000006679.b.n.a.a ENSGT00940000156584.e.b ENSGT01060000249103 Haplochromini_B ANCESTRAL SPECIES 31 ENSGT00390000012078.a.b.i ENSGT00950000182916.a.b.a.a.a.b.a.b ENSGT00390000013719 ENSGT00950000182917.a.b.b ENSGT00950000182841.a.o.a.c.a.a.a.b ENSGT00950000182841.a.o.a.c.a.a.a.a ENSGT01060000248575.D.c.b.b.a.l ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A.s #21 ENSGT00950000182818.A.t #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00390000006679.b.m.a ENSGT00390000006679.b.n.a.b ENSGT00940000179732 ENSGT00390000006679.b.n.b.a ENSGT00940000173491 ENSGT00940000177154.c ENSGT00390000006679.b.n.a.a ENSGT00940000156584.e.b Eastern happy MODERN SPECIES 16 ENSACLG00000008628 syt5a (ENSACLG00000008620) #18 tnnt1 (ENSACLG00000008610) pih1d1 (ENSACLG00000008577) ENSACLG00000008105 ENSACLG00000008095 ENSACLG00000008092 ENSACLG00000008067 ENSACLG00000007402 ENSACLG00000007398 ENSACLG00000007357 #19 si:dkey-16p21.8 (ENSACLG00000007348) prl (ENSACLG00000007341) #21 prl (ENSACLG00000007323) #21 ENSACLG00000007318 dusp3b (ENSACLG00000007299) #22 thraa (ENSACLG00000007247) ##24 nsfa (ENSACLG00000007069) #25 cdk5r1a (ENSACLG00000007067) #26 rpain (ENSACLG00000007056) PSMD11 (ENSACLG00000007023) #29 DLX3 (ENSACLG00000007018) #30 ENSACLG00000007015 #31 nags (ENSACLG00000007000) ENSACLG00000006986 ENSACLG00000006981 ENSACLG00000006968 ENSACLG00000006958 ENSACLG00000006948 ENSACLG00000006944 ENSACLG00000006873 Zebra mbuna MODERN SPECIES 1107 ENSMZEG00005022729 ENSMZEG00005022723 ENSMZEG00005022719 smg1 (ENSMZEG00005022705) hao1 (ENSMZEG00005022689) ENSMZEG00005022683 ENSMZEG00005022677 ENSMZEG00005022675 ENSMZEG00005022671 ENSMZEG00005022667 ENSMZEG00005018971 ENSMZEG00005018859 #19 si:dkey-16p21.8 (ENSMZEG00005018855) prl (ENSMZEG00005018848) #21 prl (ENSMZEG00005018843) #21 dusp3b (ENSMZEG00005018840) #22 thraa (ENSMZEG00005018835) ##24 nsfa (ENSMZEG00005018814) #25 rpain (ENSMZEG00005018807) PSMD11 (ENSMZEG00005018796) #29 cdk5r1a (ENSMZEG00005018790) #26 DLX3 (ENSMZEG00005018784) #30 ENSMZEG00005018781 #31 nags (ENSMZEG00005018774) ENSMZEG00005018769 ENSMZEG00005018765 ENSMZEG00005018763 ENSMZEG00005018760 ENSMZEG00005018746 coa3b (ENSMZEG00005018739) ENSMZEG00005018733 P. nyererei MODERN SPECIES 589 ENSPNYG00000019485 ENSPNYG00000019432 #19 si:dkey-16p21.8 (ENSPNYG00000019417) prl (ENSPNYG00000019408) #21 prl (ENSPNYG00000019398) #21 dusp3b (ENSPNYG00000019374) #22 thraa (ENSPNYG00000019352) ##24 nsfa (ENSPNYG00000019302) #25 cdk5r1a (ENSPNYG00000019291) #26 rpain (ENSPNYG00000019275) PSMD11 (ENSPNYG00000019232) #29 DLX3 (ENSPNYG00000019215) #30 ENSPNYG00000019206 #31 nags (ENSPNYG00000019192) Burton s mouthbrooder MODERN SPECIES 633 ENSHBUG00000009891 ENSHBUG00000009782 #19 si:dkey-16p21.8 (ENSHBUG00000009726) prl (ENSHBUG00000009708) #21 prl (ENSHBUG00000009682) #21 dusp3b (ENSHBUG00000009667) #22 thraa (ENSHBUG00000009639) ##24 nsfa (ENSHBUG00000009607) #25 cdk5r1a (ENSHBUG00000009502) #26 rpain (ENSHBUG00000009479) PSMD11 (ENSHBUG00000009457) #29 DLX3 (ENSHBUG00000009425) #30 dlx4a (ENSHBUG00000009402) #31 Lyretail cichlid MODERN SPECIES 424 ENSNBRG00000012344 gng13b (ENSNBRG00000012350) rad23aa (ENSNBRG00000012360) ENSNBRG00000012399 nfixb (ENSNBRG00000012439) zgc:158403 (ENSNBRG00000012460) ENSNBRG00000012493 syt5a (ENSNBRG00000012503) #18 tnnt1 (ENSNBRG00000012511) ENSNBRG00000012528 ENSNBRG00000012560 ENSNBRG00000012571 #19 si:dkey-16p21.8 (ENSNBRG00000012621) prl (ENSNBRG00000012633) #21 prl (ENSNBRG00000012705) #21 dusp3b (ENSNBRG00000013098) #22 thraa (ENSNBRG00000013365) ##24 nsfa (ENSNBRG00000014850) #25 cdk5r1a (ENSNBRG00000015130) #26 rpain (ENSNBRG00000015144) PSMD11 (ENSNBRG00000015159) #29 DLX3 (ENSNBRG00000015183) #30 ENSNBRG00000015209 #31 nags (ENSNBRG00000015229) ENSNBRG00000015267 Midas cichlid MODERN SPECIES 252 ENSACIG00000011993 ENSACIG00000011959 ENSACIG00000011943 ENSACIG00000011901 #19 si:dkey-16p21.8 (ENSACIG00000011894) prl (ENSACIG00000011586) #21 prl (ENSACIG00000011341) #21 dusp3b (ENSACIG00000011305) #22 ENSACIG00000011295 KLHL10 (ENSACIG00000011276) thraa (ENSACIG00000011258) ##24 nsfa (ENSACIG00000011229) #25 Atherinomorphae ANCESTRAL SPECIES 25 ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a.p ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00940000173491 ENSGT00940000163460.a.a.b ENSGT00940000168246 ENSGT00940000160643.i ENSGT00940000155348.B.c ENSGT00940000163871.b ENSGT00390000003628.a.b ENSGT00940000166711 Cyprinodontiformes ANCESTRAL SPECIES 3 ENSGT00390000008314 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a.p ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00940000173491 ENSGT00940000163460.a.a.b Aplocheiloidei ANCESTRAL SPECIES 272 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 Mangrove rivulus MODERN SPECIES 249 ENSKMAG00000012947 ENSKMAG00000012959 ENSKMAG00000012989 #19 si:dkey-16p21.8 (ENSKMAG00000013074) prl (ENSKMAG00000013086) #21 ENSKMAG00000013145 ENSKMAG00000013158 dusp3b (ENSKMAG00000013170) #22 ENSKMAG00000013200 ENSKMAG00000013256 GAL3ST2 (ENSKMAG00000013266) thraa (ENSKMAG00000013299) ##24 nsfa (ENSKMAG00000013366) #25 cdk5r1a (ENSKMAG00000013498) #26 rpain (ENSKMAG00000013511) PSMD11 (ENSKMAG00000013540) #29 DLX3 (ENSKMAG00000013672) #30 dlx4a (ENSKMAG00000013682) #31 Turquoise killifish MODERN SPECIES 1612 AL929222.1 (ENSNFUG00015002740) CARHSP1 (ENSNFUG00015002731) NAT15 (ENSNFUG00015002728) nat15 (ENSNFUG00015002723) dnase1 (ENSNFUG00015002715) eci1 (ENSNFUG00015002710) ENSNFUG00015002648 Nfu_g_1_019576 (ENSNFUG00015002624) ENSNFUG00015002552 ALDH16A1 (ENSNFUG00015002487) FTL (ENSNFUG00015002448) ENSNFUG00015002428 syt5a (ENSNFUG00015002424) #18 tnnt1 (ENSNFUG00015002416) ENSNFUG00015002413 dusp3b (ENSNFUG00015002412) #22 thraa (ENSNFUG00015002280) ##24 NSFA (ENSNFUG00015002129) #25 CDK5R1 (ENSNFUG00015002104) #26 RPAIN (ENSNFUG00015002100) PSMD11 (ENSNFUG00015002058) #29 DLX3 (ENSNFUG00015002037) #30 ENSNFUG00015002031 #31 ENSNFUG00015002027 ENG (ENSNFUG00015001805) ENSNFUG00015001798 Nfu_g_1_019756 (ENSNFUG00015001794) DDX39A (ENSNFUG00015001735) ENSNFUG00015001721 TXN2 (ENSNFUG00015001719) ENSNFUG00015001716 Cyprinodontoidei ANCESTRAL SPECIES 22 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a.o.a ENSGT00950000182841.a.p ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00940000173491 ENSGT00940000163460.a.a.b.c.b Poeciliinae ANCESTRAL SPECIES 1 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a.o.a ENSGT00950000182841.a.p ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00940000173491 ENSGT00940000163460.a.a.b.c.b.b ENSGT00940000163460.a.a.b.c.a ENSGT00940000164817 ENSGT00940000153578.B ENSGT00940000156435 ENSGT00390000007164 ENSGT00940000171636 Poecilia ANCESTRAL SPECIES 18 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a.o.a ENSGT00950000182841.a.p ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00940000173491 ENSGT00940000163460.a.a.b.c.b.b ENSGT00940000163460.a.a.b.c.a.b ENSGT00940000163460.a.a.b.c.a.a ENSGT00940000164817 ENSGT00940000153578.B ENSGT00940000156435 ENSGT00390000007164 NAME_6 ANCESTRAL SPECIES 146 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00530000064085.d #25 ENSGT00390000008812.b.b.b #26 ENSGT00390000006416 ENSGT00530000063301.a.a.c.b #29 ENSGT00940000158951.f #30 ENSGT00940000165079.b #31 ENSGT00390000005602 ENSGT00940000173491 ENSGT00940000177154.e ENSGT00940000163460.a.a.b.c.b.b ENSGT00940000163460.a.a.b.c.a.b ENSGT00940000163460.a.a.b.c.a.a ENSGT00940000164817 ENSGT00940000153578.B ENSGT00940000156435 Amazon molly MODERN SPECIES 470 ENSPFOG00000013658 ENSPFOG00000013670 ENSPFOG00000013976 #19 prl (ENSPFOG00000014103) #21 dusp3b (ENSPFOG00000014124) #22 thraa (ENSPFOG00000014136) ##24 nsfa (ENSPFOG00000014187) #25 CDK5R1 (ENSPFOG00000014375) #26 rpain (ENSPFOG00000014385) PSMD11 (ENSPFOG00000014420) #29 DLX3 (ENSPFOG00000014463) #30 ENSPFOG00000014479 #31 nags (ENSPFOG00000014497) ENSPFOG00000014546 ENSPFOG00000014563 ENSPFOG00000014565 ENSPFOG00000022331 ENSPFOG00000014593 ppl (ENSPFOG00000014679) glyr1 (ENSPFOG00000014804) Sailfin molly MODERN SPECIES 2697 prl (ENSPLAG00000022680) #21 dusp3b (ENSPLAG00000021496) #22 thraa (ENSPLAG00000021459) ##24 Guppy MODERN SPECIES 460 eci1 (ENSPREG00000012624) ENSPREG00000012609 ENSPREG00000012600 ENSPREG00000012532 aldh16a1 (ENSPREG00000012471) ENSPREG00000012446 syt5a (ENSPREG00000012368) #18 tnnt1 (ENSPREG00000012247) pih1d1 (ENSPREG00000012193) ENSPREG00000012179 ENSPREG00000012140 ENSPREG00000012125 ENSPREG00000012086 #19 si:dkey-16p21.8 (ENSPREG00000012071) prl (ENSPREG00000012058) #21 dusp3b (ENSPREG00000012040) #22 thraa (ENSPREG00000011986) ##24 nsfa (ENSPREG00000011863) #25 CDK5R1 (ENSPREG00000011818) #26 rpain (ENSPREG00000011787) PSMD11 (ENSPREG00000011747) #29 ENSPREG00000011723 #30 ENSPREG00000011713 #31 nags (ENSPREG00000011693) coa3b (ENSPREG00000011679) ENSPREG00000011672 ENSPREG00000011660 cbln10 (ENSPREG00000011645) ENSPREG00000011637 ENSPREG00000011590 ppl (ENSPREG00000011553) Platyfish MODERN SPECIES 7 ENSXMAG00000008636 tlcd5b (ENSXMAG00000025250) ENSXMAG00000028060 ENSXMAG00000008617 aldh16a1 (ENSXMAG00000008597) ENSXMAG00000008596 ENSXMAG00000022350 ENSXMAG00000028409 syt5a (ENSXMAG00000018006) #18 tnnt1 (ENSXMAG00000008583) pih1d1 (ENSXMAG00000008571) ENSXMAG00000010850 ENSXMAG00000010845 #19 si:dkey-16p21.8 (ENSXMAG00000020973) prl (ENSXMAG00000010841) #21 dusp3b (ENSXMAG00000028844) #22 thraa (ENSXMAG00000010829) ##24 ENSXMAG00000028514 nsfa (ENSXMAG00000010812) #25 ENSXMAG00000025449 cdk5r1a (ENSXMAG00000010811) #26 rpain (ENSXMAG00000010808) PSMD11 (ENSXMAG00000010693) #29 DLX3 (ENSXMAG00000010690) #30 ENSXMAG00000021845 #31 nags (ENSXMAG00000013316) coa3b (ENSXMAG00000025633) ENSXMAG00000028747 ENSXMAG00000022744 ENSXMAG00000026028 ENSXMAG00000007211 NAME_4 ANCESTRAL SPECIES ENSGT00940000162682.B.b #22 Sheepshead minnow MODERN SPECIES 1971 ENSCVAG00000002443 dusp3b (ENSCVAG00000002437) #22 Oryzias ANCESTRAL SPECIES ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a.p.c ENSGT00950000182841.a.p.d ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000156584.e.b ENSGT00940000164903.b ENSGT00940000159091 ENSGT00940000157981.a.b ENSGT00940000167564 ENSGT00940000159029 ENSGT00940000161386 ENSGT00940000161529 ENSGT00940000165065.a ENSGT00940000158354.c.b ENSGT00940000162072 Oryzias_b ANCESTRAL SPECIES 43 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00940000157742.a.h.b.d.a ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000174909 ENSGT00940000156584.e.b ENSGT00940000164903.b ENSGT00940000159091 ENSGT00940000157981.a.b ENSGT00940000167564 ENSGT00940000159029 ENSGT00940000161386 ENSGT00940000161529 ENSGT00940000165065.a Indian medaka MODERN SPECIES 9 epor (ENSOMEG00000010366) swsap1 (ENSOMEG00000010382) ZNF653 (ENSOMEG00000010400) tspan35 (ENSOMEG00000010413) ENSOMEG00000010427 zgc:158403 (ENSOMEG00000010538) nfixb (ENSOMEG00000010862) rad23aa (ENSOMEG00000010957) gng13b (ENSOMEG00000010977) ENSOMEG00000010985 ENSOMEG00000011000 ENSOMEG00000011077 ENSOMEG00000011186 #19 si:dkey-16p21.8 (ENSOMEG00000011207) prl (ENSOMEG00000011227) #21 dusp3b (ENSOMEG00000011244) #22 thraa (ENSOMEG00000011291) ##24 ENSOMEG00000011319 TANC2 (ENSOMEG00000011411) cyb561 (ENSOMEG00000011454) HDAC5 (ENSOMEG00000011665) pex12 (ENSOMEG00000011719) ENSOMEG00000011759 eve1 (ENSOMEG00000011771) hoxb13a (ENSOMEG00000011777) hoxb9a (ENSOMEG00000011785) hoxb8a (ENSOMEG00000011855) ENSOMEG00000011874 HOXB5 (ENSOMEG00000011882) hoxb4a (ENSOMEG00000011889) hoxb3a (ENSOMEG00000012003) Javanese ricefish MODERN SPECIES 22 ENSOJAG00000020087 prmt1 (ENSOJAG00000019709) ENSOJAG00000019672 trpm4a (ENSOJAG00000019555) cln3 (ENSOJAG00000019459) ENSOJAG00000019444 dus1l (ENSOJAG00000019355) ENSOJAG00000019331 ENSOJAG00000019307 ENSOJAG00000019282 tnnt1 (ENSOJAG00000019214) pih1d1 (ENSOJAG00000019180) ENSOJAG00000017467 ENSOJAG00000017257 #19 prl (ENSOJAG00000017242) #21 dusp3b (ENSOJAG00000017234) #22 THRA (ENSOJAG00000016706) ##24 ENSOJAG00000016653 ENSOJAG00000016614 TANC2 (ENSOJAG00000014610) cyb561 (ENSOJAG00000014547) ENSOJAG00000014535 HDAC5 (ENSOJAG00000014523) pex12 (ENSOJAG00000014515) ENSOJAG00000014499 kcnc3a (ENSOJAG00000007326) ube2z (ENSOJAG00000007274) atp5mc1 (ENSOJAG00000007185) eve1 (ENSOJAG00000007159) hoxb13a (ENSOJAG00000007146) hoxb9a (ENSOJAG00000007135) Oryzias_a ANCESTRAL SPECIES 20 ENSGT00950000182846.b ENSGT00390000005678 ENSGT01100000263484.C.b.b ENSGT00650000094974.a ENSGT00940000157744.c ENSGT00940000161135 ENSGT00950000182841.a.p.c ENSGT00950000182841.a.p.d ENSGT00940000166981 #18 ENSGT00940000160609.f ENSGT00510000048192 ENSGT01060000248595.b.a.b.b.a.a ENSGT00940000164511.C #19 ENSGT00980000198607 ENSGT00950000182818.A #21 ENSGT00940000162682.B.b #22 ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000156584.e.b ENSGT00940000164903.b ENSGT00940000159091 ENSGT00940000157981.a.b ENSGT00940000167564 ENSGT00940000159029 ENSGT00940000161386 ENSGT00940000161529 ENSGT00940000165065.a ENSGT00940000158354.c.b ENSGT00940000162072 Japanese Medaka HdrR MODERN SPECIES 22 dnase1 (ENSORLG00000016693) eci1 (ENSORLG00000016704) ENSORLG00000016708 ENSORLG00000025723 ENSORLG00000016728 aldh16a1 (ENSORLG00000016761) ENSORLG00000027266 ENSORLG00000016774 syt5a (ENSORLG00000016779) #18 tnnt1 (ENSORLG00000016788) pih1d1 (ENSORLG00000016801) ENSORLG00000016883 ENSORLG00000016916 #19 si:dkey-16p21.8 (ENSORLG00000022994) prl (ENSORLG00000016928) #21 dusp3b (ENSORLG00000022760) #22 thraa (ENSORLG00000016941) ##24 ENSORLG00000028632 ENSORLG00000024506 ENSORLG00000027877 ##20 ENSORLG00000023067 ENSORLG00000023280 ENSORLG00000022454 ENSORLG00000025689 ENSORLG00000016958 cyb561 (ENSORLG00000016966) HDAC5 (ENSORLG00000016994) pex12 (ENSORLG00000017001) ENSORLG00000017003 col1a1a (ENSORLG00000017013) ENSORLG00000022724 Chinese medaka MODERN SPECIES 2875 dusp3b (ENSOSIG00000001365) #22