Sarcopterygii	ANCESTRAL SPECIES	94		ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152 #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Tetrapoda	ANCESTRAL SPECIES	21		ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152 #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Amniota	ANCESTRAL SPECIES	14	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Mammalia	ANCESTRAL SPECIES	12	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000172404	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35
Theria	ANCESTRAL SPECIES	9	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000172404	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35
Eutheria	ANCESTRAL SPECIES	4	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000159720	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00950000185410	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00950000185410	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Glires	ANCESTRAL SPECIES	3	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Rodentia	ANCESTRAL SPECIES	4	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Guinea pig	MODERN SPECIES	53	GNGT2 (ENSCPOG00000030054) #7	B4GALNT2 (ENSCPOG00000006191) #8	IGF2BP1 (ENSCPOG00000020174) #9	GIP (ENSCPOG00000023966) #10	SNF8 (ENSCPOG00000020610) #11	UBE2Z (ENSCPOG00000024416) #12	ENSCPOG00000009017 #13	CALCOCO2 (ENSCPOG00000021273) #14	TTLL6 (ENSCPOG00000012509) #15	HOXB13 (ENSCPOG00000013509) #16	HOXB9 (ENSCPOG00000037597) #17	HOXB6 (ENSCPOG00000040707) #18	HOXB5 (ENSCPOG00000030746) #19	ENSCPOG00000010105 #20	ENSCPOG00000010107 #21	HOXB2 (ENSCPOG00000035468) #22	HOXB1 (ENSCPOG00000022183) #23	SKAP1 (ENSCPOG00000022118) #24	SNX11 (ENSCPOG00000020234) #25	CBX1 (ENSCPOG00000034435) #26	NFE2L1 (ENSCPOG00000030805) #27	COPZ2 (ENSCPOG00000019500) #28	CDK5RAP3 (ENSCPOG00000007275) #29	PRR15L (ENSCPOG00000035567) #30	PNPO (ENSCPOG00000003187) #31	SP2 (ENSCPOG00000014943) #32	SP6 (ENSCPOG00000007638) #33	SCRN2 (ENSCPOG00000006929) #34	LRRC46 (ENSCPOG00000006925) #35	MRPL10 (ENSCPOG00000037104) #36	OSBPL7 (ENSCPOG00000006914) #37
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Long-tailed chinchilla	MODERN SPECIES	158	B4GALNT2 (ENSCLAG00000016224) #8	IGF2BP1 (ENSCLAG00000015853) #9	ENSCLAG00000014301 #10	SNF8 (ENSCLAG00000013387) #11	UBE2Z (ENSCLAG00000016068) #12	ATP5MC1 (ENSCLAG00000015723) #13	CALCOCO2 (ENSCLAG00000015881) #14	TTLL6 (ENSCLAG00000013529) #15	HOXB13 (ENSCLAG00000014855) #16	ENSCLAG00000015198 #17	HOXB7 (ENSCLAG00000014906)	HOXB6 (ENSCLAG00000015524) #18	HOXB5 (ENSCLAG00000014374) #19	HOXB4 (ENSCLAG00000014725)	HOXB3 (ENSCLAG00000015322) #21	HOXB2 (ENSCLAG00000015271) #22	HOXB1 (ENSCLAG00000013047) #23	SKAP1 (ENSCLAG00000015423) #24	SNX11 (ENSCLAG00000015837) #25	CBX1 (ENSCLAG00000013587) #26	NFE2L1 (ENSCLAG00000014836) #27	COPZ2 (ENSCLAG00000013544) #28	CDK5RAP3 (ENSCLAG00000012292) #29	PRR15L (ENSCLAG00000017903) #30	PNPO (ENSCLAG00000013871) #31	SP2 (ENSCLAG00000014115) #32	SP6 (ENSCLAG00000016276) #33	LRRC46 (ENSCLAG00000016713) #35	SCRN2 (ENSCLAG00000013965) #34	MRPL10 (ENSCLAG00000015400) #36	OSBPL7 (ENSCLAG00000014839) #37
Degu	MODERN SPECIES	97	B4GALNT2 (ENSODEG00000018456) #8	ENSODEG00000016991 #9	ENSODEG00000017109	GIP (ENSODEG00000017003) #10	ENSODEG00000017032 #11	UBE2Z (ENSODEG00000017306) #12	ATP5MC1 (ENSODEG00000017366) #13	TTLL6 (ENSODEG00000017145) #15	HOXB13 (ENSODEG00000017199) #16	HOXB9 (ENSODEG00000017293) #17	HOXB8 (ENSODEG00000017119)	HOXB6 (ENSODEG00000016988) #18	HOXB5 (ENSODEG00000017253) #19	HOXB4 (ENSODEG00000017038)	HOXB3 (ENSODEG00000017116) #21	HOXB2 (ENSODEG00000017153) #22	HOXB1 (ENSODEG00000017050) #23	SKAP1 (ENSODEG00000017533) #24	SNX11 (ENSODEG00000017458) #25	CBX1 (ENSODEG00000017272) #26	NFE2L1 (ENSODEG00000017348) #27	ENSODEG00000020421	COPZ2 (ENSODEG00000017565) #28	ENSODEG00000017229 #29	PNPO (ENSODEG00000017424) #31	SP2 (ENSODEG00000017126) #32	SP6 (ENSODEG00000017625) #33	SCRN2 (ENSODEG00000017395) #34	LRRC46 (ENSODEG00000017367) #35	MRPL10 (ENSODEG00000017536) #36	OSBPL7 (ENSODEG00000017364) #37
Naked mole-rat female	MODERN SPECIES	12	ENSHGLG00000010703 #10	SNF8 (ENSHGLG00000011519) #11	UBE2Z (ENSHGLG00000016280) #12	ATP5MC1 (ENSHGLG00000035460) #13	CALCOCO2 (ENSHGLG00000012114) #14	TTLL6 (ENSHGLG00000019187) #15	HOXB13 (ENSHGLG00000014634) #16	ENSHGLG00000048296	HOXB9 (ENSHGLG00000014731) #17	HOXB8 (ENSHGLG00000038380)	HOXB7 (ENSHGLG00000045318)	HOXB6 (ENSHGLG00000012400) #18	HOXB5 (ENSHGLG00000039265) #19	HOXB4 (ENSHGLG00000034075)	HOXB3 (ENSHGLG00000010686) #21	HOXB2 (ENSHGLG00000010090) #22	HOXB1 (ENSHGLG00000009781) #23	SKAP1 (ENSHGLG00000014563) #24	SNX11 (ENSHGLG00000016837) #25	CBX1 (ENSHGLG00000013574) #26	NFE2L1 (ENSHGLG00000012592) #27	COPZ2 (ENSHGLG00000018543) #28	CDK5RAP3 (ENSHGLG00000019464) #29	PRR15L (ENSHGLG00000014696) #30	PNPO (ENSHGLG00000013159) #31	SP2 (ENSHGLG00000009902) #32	SP6 (ENSHGLG00000021113) #33	SCRN2 (ENSHGLG00000041375) #34	LRRC46 (ENSHGLG00000035931) #35	MRPL10 (ENSHGLG00000048399) #36	OSBPL7 (ENSHGLG00000012525) #37
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Marmotini	ANCESTRAL SPECIES	8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Squirrel	MODERN SPECIES	90	GIP (ENSSTOG00000004043) #10	SNF8 (ENSSTOG00000004023) #11	UBE2Z (ENSSTOG00000000796) #12	ATP5MC1 (ENSSTOG00000013404) #13	ENSSTOG00000013395 #14	TTLL6 (ENSSTOG00000006016) #15	ENSSTOG00000025444	HOXB13 (ENSSTOG00000014942) #16	HOXB9 (ENSSTOG00000009741) #17	HOXB8 (ENSSTOG00000028337)	HOXB7 (ENSSTOG00000025657)	HOXB6 (ENSSTOG00000020303) #18	HOXB5 (ENSSTOG00000009740) #19	HOXB4 (ENSSTOG00000009734)	HOXB3 (ENSSTOG00000025093) #21	HOXB2 (ENSSTOG00000023586) #22	HOXB1 (ENSSTOG00000028630) #23	SKAP1 (ENSSTOG00000013692) #24	SNX11 (ENSSTOG00000013684) #25	CBX1 (ENSSTOG00000023986) #26	NFE2L1 (ENSSTOG00000013664) #27	ENSSTOG00000027550 #28	CDK5RAP3 (ENSSTOG00000006244) #29	PRR15L (ENSSTOG00000006235) #30	PNPO (ENSSTOG00000006221) #31	SP2 (ENSSTOG00000015926) #32	SP6 (ENSSTOG00000001607) #33	SCRN2 (ENSSTOG00000027108) #34	LRRC46 (ENSSTOG00000002068) #35	MRPL10 (ENSSTOG00000024617) #36	OSBPL7 (ENSSTOG00000001636) #37
Arctic ground squirrel	MODERN SPECIES	46	IGF2BP1 (ENSUPAG00010006100) #9	GIP (ENSUPAG00010006136) #10	SNF8 (ENSUPAG00010006148) #11	UBE2Z (ENSUPAG00010006178) #12	ENSUPAG00010006195	CALCOCO2 (ENSUPAG00010006243) #14	TTLL6 (ENSUPAG00010006267) #15	HOXB13 (ENSUPAG00010006301) #16	HOXB9 (ENSUPAG00010006305) #17	HOXB8 (ENSUPAG00010006310)	HOXB7 (ENSUPAG00010006312)	HOXB6 (ENSUPAG00010006317) #18	HOXB5 (ENSUPAG00010006320) #19	HOXB4 (ENSUPAG00010006325)	HOXB3 (ENSUPAG00010006328) #21	HOXB2 (ENSUPAG00010006336) #22	HOXB1 (ENSUPAG00010006340) #23	SKAP1 (ENSUPAG00010006345) #24	SNX11 (ENSUPAG00010006370) #25	CBX1 (ENSUPAG00010006381) #26	NFE2L1 (ENSUPAG00010006396) #27	COPZ2 (ENSUPAG00010006455) #28	CDK5RAP3 (ENSUPAG00010006466) #29	PRR15L (ENSUPAG00010006473) #30	PNPO (ENSUPAG00010006483) #31	SP2 (ENSUPAG00010006507) #32	SP6 (ENSUPAG00010006522) #33	SCRN2 (ENSUPAG00010006526) #34	LRRC46 (ENSUPAG00010006533) #35	MRPL10 (ENSUPAG00010006539) #36	OSBPL7 (ENSUPAG00010006545) #37
Eurasian red squirrel	MODERN SPECIES	12	GIP (ENSSVLG00005020522) #10	SNF8 (ENSSVLG00005020472) #11	ENSSVLG00005020450	UBE2Z (ENSSVLG00005020428) #12	ATP5MC1 (ENSSVLG00005020344) #13	CALCOCO2 (ENSSVLG00005020296) #14	TTLL6 (ENSSVLG00005020005) #15	HOXB13 (ENSSVLG00005019820) #16	HOXB9 (ENSSVLG00005019725) #17	HOXB8 (ENSSVLG00005019675)	HOXB7 (ENSSVLG00005019618)	HOXB6 (ENSSVLG00005019586) #18	HOXB5 (ENSSVLG00005019546) #19	HOXB4 (ENSSVLG00005019455)	HOXB3 (ENSSVLG00005019421) #21	HOXB2 (ENSSVLG00005019378) #22	HOXB1 (ENSSVLG00005019304) #23	SKAP1 (ENSSVLG00005019232) #24	SNX11 (ENSSVLG00005019122) #25	CBX1 (ENSSVLG00005019034) #26	NFE2L1 (ENSSVLG00005018798) #27	COPZ2 (ENSSVLG00005018641) #28	CDK5RAP3 (ENSSVLG00005018459) #29	PRR15L (ENSSVLG00005018399) #30	PNPO (ENSSVLG00005018295) #31	ENSSVLG00005018218 #32	SP6 (ENSSVLG00005018194) #33	SCRN2 (ENSSVLG00005018077) #34	LRRC46 (ENSSVLG00005018036) #35	MRPL10 (ENSSVLG00005017985) #36	OSBPL7 (ENSSVLG00005017757) #37
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Muroidea	ANCESTRAL SPECIES		ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Cricetidae	ANCESTRAL SPECIES		ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.ab	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.a.a ##26	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.ab	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Northern American deer mouse	MODERN SPECIES	21	Gngt2 (ENSPEMG00000027491) #7	B4galnt2 (ENSPEMG00000020717) #8	Igf2bp1 (ENSPEMG00000021974) #9	Gip (ENSPEMG00000021184) #10	Snf8 (ENSPEMG00000022229) #11	Ube2z (ENSPEMG00000020953) #12	Atp5g1 (ENSPEMG00000020590)	ENSPEMG00000028729 #14	ENSPEMG00000025676 #14	Ttll6 (ENSPEMG00000021918) #15	Hoxb13 (ENSPEMG00000021511) #16	Hoxb9 (ENSPEMG00000027158) #17	Hoxb5 (ENSPEMG00000030101) #19	Hoxb4 (ENSPEMG00000029805)	Hoxb3 (ENSPEMG00000028692) #21	Hoxb2 (ENSPEMG00000029510) #22	Hoxb1 (ENSPEMG00000023977) #23	Skap1 (ENSPEMG00000000585) #24	ENSPEMG00000020286	Snx11 (ENSPEMG00000000381) #25	Cbx1 (ENSPEMG00000020976) ##26	Nfe2l1 (ENSPEMG00000010512) #27	Copz2 (ENSPEMG00000011137) #28	Cdk5rap3 (ENSPEMG00000020712) #29	ENSPEMG00000030963	Prr15l (ENSPEMG00000024436) #30	Pnpo (ENSPEMG00000025094) #31	Sp2 (ENSPEMG00000017112) #32	Sp6 (ENSPEMG00000001231) #33	Scrn2 (ENSPEMG00000020381) #34	Lrrc46 (ENSPEMG00000020507) #35
Prairie vole	MODERN SPECIES	114		ENSMOCG00000004266	ENSMOCG00000021226 #10	Snf8 (ENSMOCG00000016684) #11	Ube2z (ENSMOCG00000018241) #12	ENSMOCG00000013163	Ttll6 (ENSMOCG00000021089) #15	Hoxb13 (ENSMOCG00000021389) #16	Hoxb9 (ENSMOCG00000020312) #17	Hoxb8 (ENSMOCG00000018435)	Hoxb7 (ENSMOCG00000020820)	Hoxb6 (ENSMOCG00000020355) #18	Hoxb5 (ENSMOCG00000014523) #19	Hoxb4 (ENSMOCG00000022964)	Hoxb3 (ENSMOCG00000020739) #21	Hoxb2 (ENSMOCG00000014846) #22	Hoxb1 (ENSMOCG00000002452) #23	Skap1 (ENSMOCG00000018431) #24	Snx11 (ENSMOCG00000019303) #25	Cbx1 (ENSMOCG00000001520) #26	Nfe2l1 (ENSMOCG00000016002) #27	Copz2 (ENSMOCG00000022427) #28	Cdk5rap3 (ENSMOCG00000019534) #29	Prr15l (ENSMOCG00000006695) #30	Pnpo (ENSMOCG00000011655) #31	Sp2 (ENSMOCG00000020935) #32	Sp6 (ENSMOCG00000007065) #33	Scrn2 (ENSMOCG00000019511) #34	Lrrc46 (ENSMOCG00000016707) #35	Mrpl10 (ENSMOCG00000019451) #36	Osbpl7 (ENSMOCG00000021054) #37
Cricetinae	ANCESTRAL SPECIES		ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.`b.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.a.b ##26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Golden Hamster	MODERN SPECIES	674	Gngt2 (ENSMAUG00000019144) #7	B4galnt2 (ENSMAUG00000007916) #8	Gip (ENSMAUG00000009238) #10	Snf8 (ENSMAUG00000001857) #11	Ube2z (ENSMAUG00000007792) #12	ENSMAUG00000021751	Ttll6 (ENSMAUG00000020973) #15	Hoxb13 (ENSMAUG00000008407) #16	Hoxb9 (ENSMAUG00000017720) #17	Hoxb8 (ENSMAUG00000012636)	Hoxb7 (ENSMAUG00000021297)	Hoxb6 (ENSMAUG00000021423) #18	Hoxb5 (ENSMAUG00000021419) #19	Hoxb4 (ENSMAUG00000009367)	Hoxb3 (ENSMAUG00000011251) #21	Hoxb2 (ENSMAUG00000021979) #22	Hoxb1 (ENSMAUG00000013237) #23	Skap1 (ENSMAUG00000022191) #24	Snx11 (ENSMAUG00000021528) #25	ENSMAUG00000003463 ##26	Nfe2l1 (ENSMAUG00000020456) #27	Copz2 (ENSMAUG00000010560) #28	Cdk5rap3 (ENSMAUG00000007991) #29	Pnpo (ENSMAUG00000021706) #31	Sp2 (ENSMAUG00000019269) #32	Sp6 (ENSMAUG00000009667) #33	Scrn2 (ENSMAUG00000010014) #34	Lrrc46 (ENSMAUG00000019416) #35	Mrpl10 (ENSMAUG00000000820) #36	Osbpl7 (ENSMAUG00000013876) #37	Tbx21 (ENSMAUG00000017507)
Chinese hamster chok1gshd	MODERN SPECIES	33	Gip (ENSCGRG00001021533) #10	Snf8 (ENSCGRG00001000737) #11	Ube2z (ENSCGRG00001019150) #12	ENSCGRG00001022606	ENSCGRG00001010560	ENSCGRG00001011435 #14	Ttll6 (ENSCGRG00001018398) #15	Hoxb13 (ENSCGRG00001015060) #16	Hoxb9 (ENSCGRG00001015314) #17	Hoxb8 (ENSCGRG00001020235)	Hoxb7 (ENSCGRG00001021590)	Hoxb6 (ENSCGRG00001015674) #18	Hoxb5 (ENSCGRG00001016167) #19	Hoxb4 (ENSCGRG00001022431)	Hoxb3 (ENSCGRG00001016667) #21	Hoxb2 (ENSCGRG00001017587) #22	Hoxb1 (ENSCGRG00001024619) #23	ENSCGRG00001023355 #24	ENSCGRG00001020759 #24	Snx11 (ENSCGRG00001022221) #25	Cbx1 (ENSCGRG00001014799) ##26	Nfe2l1 (ENSCGRG00001015287) #27	Copz2 (ENSCGRG00001014767) #28	Cdk5rap3 (ENSCGRG00001006966) #29	Prr15l (ENSCGRG00001008926) #30	Pnpo (ENSCGRG00001018189) #31	Sp2 (ENSCGRG00001010976) #32	Sp6 (ENSCGRG00001002797) #33	Scrn2 (ENSCGRG00001022143) #34	Lrrc46 (ENSCGRG00001019758) #35	Mrpl10 (ENSCGRG00001024199) #36
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Mus	ANCESTRAL SPECIES	2	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Mouse	MODERN SPECIES	2	Igf2bp1 (ENSMUSG00000013415) #9	Gip (ENSMUSG00000014351) #10	Snf8 (ENSMUSG00000006058) #11	Ube2z (ENSMUSG00000014349) #12	Atp5g1 (ENSMUSG00000006057)	Calcoco2 (ENSMUSG00000006056) #14	Ttll6 (ENSMUSG00000038756) #15	Hoxb13 (ENSMUSG00000049604) #16	Hoxb9 (ENSMUSG00000020875) #17	Hoxb8 (ENSMUSG00000056648)	Hoxb7 (ENSMUSG00000038721)	Hoxb6 (ENSMUSG00000000690) #18	Hoxb5 (ENSMUSG00000038700) #19	Hoxb4 (ENSMUSG00000038692)	Hoxb3 (ENSMUSG00000048763) #21	Hoxb2 (ENSMUSG00000075588) #22	Hoxb1 (ENSMUSG00000018973) #23	Skap1 (ENSMUSG00000057058) #24	Snx11 (ENSMUSG00000020876) #25	Cbx1 (ENSMUSG00000018666) #26	Nfe2l1 (ENSMUSG00000038615) #27	Copz2 (ENSMUSG00000018672) #28	Cdk5rap3 (ENSMUSG00000018669) #29	Prr15l (ENSMUSG00000047040) #30	Pnpo (ENSMUSG00000018659) #31	Sp2 (ENSMUSG00000018678) #32	Sp6 (ENSMUSG00000038560) #33	Scrn2 (ENSMUSG00000020877) #34	Lrrc46 (ENSMUSG00000020878) #35	Mrpl10 (ENSMUSG00000001445) #36	Osbpl7 (ENSMUSG00000038534) #37
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc.b #26	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Steppe mouse	MODERN SPECIES	3291	Gip (ENSMSIG00000019162) #10	Snf8 (ENSMSIG00000019072) #11	Ube2z (ENSMSIG00000019038) #12	Atp5g1 (ENSMSIG00000018986)	ENSMSIG00000018956 #14	Ttll6 (ENSMSIG00000018881) #15	Hoxb13 (ENSMSIG00000018865) #16	Hoxb9 (ENSMSIG00000018823) #17	Hoxb8 (ENSMSIG00000018807)	Hoxb7 (ENSMSIG00000018805)	Hoxb6 (ENSMSIG00000018795) #18	Hoxb5 (ENSMSIG00000018787) #19	Hoxb4 (ENSMSIG00000018777)	ENSMSIG00000018776	Hoxb3 (ENSMSIG00000018771) #21	Hoxb2 (ENSMSIG00000018769) #22	Hoxb1 (ENSMSIG00000018752) #23	Skap1 (ENSMSIG00000018601) #24	Snx11 (ENSMSIG00000018546) #25	ENSMSIG00000018520	Cbx1 (ENSMSIG00000018447) #26	Nfe2l1 (ENSMSIG00000018374) #27	Copz2 (ENSMSIG00000018337) #28	Cdk5rap3 (ENSMSIG00000018309) #29	ENSMSIG00000018270 #30	ENSMSIG00000018267 #31	Sp2 (ENSMSIG00000018237) #32	Sp6 (ENSMSIG00000018223) #33	Scrn2 (ENSMSIG00000018202) #34	Lrrc46 (ENSMSIG00000018171) #35	Mrpl10 (ENSMSIG00000018160) #36
spretus	MODERN SPECIES	2	Igf2bp1 (MGP_SPRETEiJ_G0017862) #9	Gip (MGP_SPRETEiJ_G0017863) #10	Snf8 (MGP_SPRETEiJ_G0017864) #11	Ube2z (MGP_SPRETEiJ_G0017865) #12	Atp5g1 (MGP_SPRETEiJ_G0017866)	MGP_SPRETEiJ_G0017867 #14	Ttll6 (MGP_SPRETEiJ_G0017868) #15	Hoxb13 (MGP_SPRETEiJ_G0017869) #16	Hoxb9 (MGP_SPRETEiJ_G0017870) #17	Hoxb8 (MGP_SPRETEiJ_G0017871)	Hoxb7 (MGP_SPRETEiJ_G0017872)	Hoxb6 (MGP_SPRETEiJ_G0017873) #18	Hoxb5 (MGP_SPRETEiJ_G0017874) #19	Hoxb4 (MGP_SPRETEiJ_G0017875)	Hoxb3 (MGP_SPRETEiJ_G0017876) #21	Hoxb2 (MGP_SPRETEiJ_G0017877) #22	Hoxb1 (MGP_SPRETEiJ_G0017878) #23	MGP_SPRETEiJ_G0017879 #24	Snx11 (MGP_SPRETEiJ_G0017880) #25	Cbx1 (MGP_SPRETEiJ_G0017881) #26	MGP_SPRETEiJ_G0017882	Nfe2l1 (MGP_SPRETEiJ_G0017883) #27	Copz2 (MGP_SPRETEiJ_G0017884) #28	Cdk5rap3 (MGP_SPRETEiJ_G0017885) #29	Prr15l (MGP_SPRETEiJ_G0017886) #30	Pnpo (MGP_SPRETEiJ_G0017887) #31	Sp2 (MGP_SPRETEiJ_G0017888) #32	Sp6 (MGP_SPRETEiJ_G0017889) #33	Scrn2 (MGP_SPRETEiJ_G0017890) #34	Lrrc46 (MGP_SPRETEiJ_G0017891) #35	Mrpl10 (MGP_SPRETEiJ_G0017892) #36
Ryukyu mouse	MODERN SPECIES	2	Igf2bp1 (MGP_CAROLIEiJ_G0017016) #9	Gip (MGP_CAROLIEiJ_G0017017) #10	Snf8 (MGP_CAROLIEiJ_G0017018) #11	MGP_CAROLIEiJ_G0017019 #12	MGP_CAROLIEiJ_G0017020	MGP_CAROLIEiJ_G0017021 #14	Ttll6 (MGP_CAROLIEiJ_G0017022) #15	Hoxb13 (MGP_CAROLIEiJ_G0017023) #16	Hoxb9 (MGP_CAROLIEiJ_G0017024) #17	Hoxb8 (MGP_CAROLIEiJ_G0017025)	Hoxb7 (MGP_CAROLIEiJ_G0017026)	Hoxb6 (MGP_CAROLIEiJ_G0017027) #18	Hoxb5 (MGP_CAROLIEiJ_G0017028) #19	Hoxb4 (MGP_CAROLIEiJ_G0017029)	Hoxb3 (MGP_CAROLIEiJ_G0017030) #21	Hoxb2 (MGP_CAROLIEiJ_G0017031) #22	Hoxb1 (MGP_CAROLIEiJ_G0017032) #23	Skap1 (MGP_CAROLIEiJ_G0017033) #24	Snx11 (MGP_CAROLIEiJ_G0017034) #25	Cbx1 (MGP_CAROLIEiJ_G0017035) #26	MGP_CAROLIEiJ_G0017036	Nfe2l1 (MGP_CAROLIEiJ_G0017037) #27	Copz2 (MGP_CAROLIEiJ_G0017038) #28	Cdk5rap3 (MGP_CAROLIEiJ_G0017039) #29	Prr15l (MGP_CAROLIEiJ_G0017040) #30	Pnpo (MGP_CAROLIEiJ_G0017041) #31	Sp2 (MGP_CAROLIEiJ_G0017042) #32	Sp6 (MGP_CAROLIEiJ_G0017043) #33	MGP_CAROLIEiJ_G0017044 #34	Lrrc46 (MGP_CAROLIEiJ_G0017045) #35	Mrpl10 (MGP_CAROLIEiJ_G0017046) #36
Shrew mouse	MODERN SPECIES	5	MGP_PahariEiJ_G0018146 #9	Gip (MGP_PahariEiJ_G0018147) #10	Snf8 (MGP_PahariEiJ_G0018148) #11	Ube2z (MGP_PahariEiJ_G0018149) #12	Atp5g1 (MGP_PahariEiJ_G0018150)	MGP_PahariEiJ_G0018151 #14	Ttll6 (MGP_PahariEiJ_G0018152) #15	Hoxb13 (MGP_PahariEiJ_G0018153) #16	Hoxb9 (MGP_PahariEiJ_G0018154) #17	Hoxb8 (MGP_PahariEiJ_G0018155)	Hoxb7 (MGP_PahariEiJ_G0018156)	Hoxb6 (MGP_PahariEiJ_G0018157) #18	Hoxb5 (MGP_PahariEiJ_G0018158) #19	Hoxb4 (MGP_PahariEiJ_G0018159)	Hoxb3 (MGP_PahariEiJ_G0018160) #21	Hoxb2 (MGP_PahariEiJ_G0018161) #22	Hoxb1 (MGP_PahariEiJ_G0018162) #23	Skap1 (MGP_PahariEiJ_G0018163) #24	Snx11 (MGP_PahariEiJ_G0018164) #25	Cbx1 (MGP_PahariEiJ_G0018165) #26	MGP_PahariEiJ_G0018166	Nfe2l1 (MGP_PahariEiJ_G0018167) #27	Copz2 (MGP_PahariEiJ_G0018168) #28	Cdk5rap3 (MGP_PahariEiJ_G0018169) #29	Prr15l (MGP_PahariEiJ_G0018170) #30	Pnpo (MGP_PahariEiJ_G0018171) #31	Sp2 (MGP_PahariEiJ_G0018172) #32	Sp6 (MGP_PahariEiJ_G0018173) #33	Scrn2 (MGP_PahariEiJ_G0018174) #34	Lrrc46 (MGP_PahariEiJ_G0018175) #35	Mrpl10 (MGP_PahariEiJ_G0018176) #36
Rat	MODERN SPECIES	1	B4galnt2 (ENSRNOG00000067203) #8	Igf2bp1 (ENSRNOG00000006122) #9	Gip (ENSRNOG00000006306) #10	Snf8 (ENSRNOG00000006500) #11	Ube2z (ENSRNOG00000006868) #12	ENSRNOG00000066153 #14	Ttll6 (ENSRNOG00000004939) #15	Hoxb13 (ENSRNOG00000007491) #16	Hoxb9 (ENSRNOG00000007573) #17	Hoxb8 (ENSRNOG00000007585)	Hoxb7 (ENSRNOG00000007611)	Hoxb6 (ENSRNOG00000007823) #18	Hoxb5 (ENSRNOG00000008010) #19	Hoxb4 (ENSRNOG00000008191)	Hoxb3 (ENSRNOG00000008313) #21	Hoxb2 (ENSRNOG00000008365) #22	Hoxb1 (ENSRNOG00000008506) #23	Skap1 (ENSRNOG00000023881) #24	Snx11 (ENSRNOG00000008642) #25	Cbx1 (ENSRNOG00000008689) #26	Nfe2l1 (ENSRNOG00000008830) #27	Copz2 (ENSRNOG00000009225) #28	Cdk5rap3 (ENSRNOG00000048747) #29	Prr15l (ENSRNOG00000049162) #30	Pnpo (ENSRNOG00000046493) #31	Sp2 (ENSRNOG00000010492) #32	Sp6 (ENSRNOG00000023551) #33	Scrn2 (ENSRNOG00000010214) #34	Lrrc46 (ENSRNOG00000009902) #35	Mrpl10 (ENSRNOG00000009567) #36	Osbpl7 (ENSRNOG00000009473) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1028	Igf2bp1 (ENSNGAG00000015679) #9	Gip (ENSNGAG00000020354) #10	Snf8 (ENSNGAG00000001366) #11	Ube2z (ENSNGAG00000024296) #12	ENSNGAG00000024212	ENSNGAG00000023585 #14	Ttll6 (ENSNGAG00000011763) #15	Hoxb13 (ENSNGAG00000011053) #16	Hoxb9 (ENSNGAG00000010851) #17	Hoxb8 (ENSNGAG00000010647)	Hoxb7 (ENSNGAG00000010205)	Hoxb6 (ENSNGAG00000000973) #18	Hoxb5 (ENSNGAG00000023238) #19	Hoxb4 (ENSNGAG00000021768)	Hoxb3 (ENSNGAG00000020227) #21	Hoxb2 (ENSNGAG00000019089) #22	Hoxb1 (ENSNGAG00000018593) #23	Skap1 (ENSNGAG00000012571) #24	Snx11 (ENSNGAG00000010446) #25	Cbx1 (ENSNGAG00000006760) #26	Nfe2l1 (ENSNGAG00000000736) #27	Copz2 (ENSNGAG00000023713) #28	ENSNGAG00000000747 #29	ENSNGAG00000022529	Prr15l (ENSNGAG00000021432) #30	Pnpo (ENSNGAG00000020016) #31	Sp2 (ENSNGAG00000017612) #32	Sp6 (ENSNGAG00000015868) #33	Scrn2 (ENSNGAG00000023806) #34	Lrrc46 (ENSNGAG00000022557) #35	Mrpl10 (ENSNGAG00000022195) #36
Lesser Egyptian jerboa	MODERN SPECIES	56	B4galnt2 (ENSJJAG00000006322) #8	Igf2bp1 (ENSJJAG00000002687) #9	Gip (ENSJJAG00000010688) #10	Snf8 (ENSJJAG00000006012) #11	ENSJJAG00000003530 #12	ENSJJAG00000010301	Ttll6 (ENSJJAG00000010253) #15	Hoxb13 (ENSJJAG00000010401) #16	Hoxb9 (ENSJJAG00000009821) #17	Hoxb8 (ENSJJAG00000002398)	Hoxb7 (ENSJJAG00000001284)	Hoxb6 (ENSJJAG00000000997) #18	Hoxb5 (ENSJJAG00000000763) #19	Hoxb4 (ENSJJAG00000002642)	Hoxb3 (ENSJJAG00000007804) #21	Hoxb2 (ENSJJAG00000009465) #22	Hoxb1 (ENSJJAG00000001073) #23	Skap1 (ENSJJAG00000003458) #24	ENSJJAG00000005754 #25	ENSJJAG00000007753 ##26	Nfe2l1 (ENSJJAG00000006432) #27	Copz2 (ENSJJAG00000001025) #28	ENSJJAG00000002511 #29	Prr15l (ENSJJAG00000006478) #30	Pnpo (ENSJJAG00000023608) #31	Sp2 (ENSJJAG00000003061) #32	Sp6 (ENSJJAG00000006452) #33	Scrn2 (ENSJJAG00000023635) #34	Lrrc46 (ENSJJAG00000010412) #35	Mrpl10 (ENSJJAG00000004046) #36	Osbpl7 (ENSJJAG00000004477) #37
Kangaroo rat	MODERN SPECIES	326	Gngt2 (ENSDORG00000023588) #7	Igf2bp1 (ENSDORG00000014371) #9	Snf8 (ENSDORG00000009262) #11	Ube2z (ENSDORG00000009258) #12	ENSDORG00000008511 #13	ENSDORG00000028385	ENSDORG00000024585 #14	Hoxb13 (ENSDORG00000008369) #16	Hoxb9 (ENSDORG00000027423) #17	Hoxb8 (ENSDORG00000007906)	Hoxb7 (ENSDORG00000007905)	Hoxb6 (ENSDORG00000023877) #18	Hoxb5 (ENSDORG00000007900) #19	Hoxb4 (ENSDORG00000007899)	Hoxb3 (ENSDORG00000007898) #21	Hoxb2 (ENSDORG00000007897) #22	Hoxb1 (ENSDORG00000007896) #23	Snx11 (ENSDORG00000029078) #25	Cbx1 (ENSDORG00000026399) #26	Nfe2l1 (ENSDORG00000000715) #27	Copz2 (ENSDORG00000013441) #28	Prr15l (ENSDORG00000027427) #30	Pnpo (ENSDORG00000014110) #31	Sp2 (ENSDORG00000014109) #32	Sp6 (ENSDORG00000026201) #33	Scrn2 (ENSDORG00000002361) #34	Osbpl7 (ENSDORG00000002354) #37	Tbx21 (ENSDORG00000013302)	Npepps (ENSDORG00000009627)	Socs7 (ENSDORG00000028979)	ENSDORG00000007713
Lagomorpha	ANCESTRAL SPECIES		ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.dc #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Rabbit	MODERN SPECIES	10	B4GALNT2 (ENSOCUG00000003531) #8	IGF2BP1 (ENSOCUG00000004411) #9	GIP (ENSOCUG00000004410) #10	SNF8 (ENSOCUG00000009156) #11	UBE2Z (ENSOCUG00000009159) #12	ATP5MC1 (ENSOCUG00000016225) #13	CALCOCO2 (ENSOCUG00000016209) #14	ENSOCUG00000038154	TTLL6 (ENSOCUG00000006289) #15	HOXB13 (ENSOCUG00000012816) #16	HOXB9 (ENSOCUG00000027316) #17	HOXB8 (ENSOCUG00000029186)	HOXB5 (ENSOCUG00000023093) #19	HOXB6 (ENSOCUG00000011560) #18	HOXB3 (ENSOCUG00000023337) #21	HOXB2 (ENSOCUG00000024951) #22	HOXB1 (ENSOCUG00000001720) #23	SKAP1 (ENSOCUG00000001717) #24	SNX11 (ENSOCUG00000002309) #25	CBX1 (ENSOCUG00000008021) #26	NFE2L1 (ENSOCUG00000022298) #27	COPZ2 (ENSOCUG00000001802) #28	CDK5RAP3 (ENSOCUG00000012325) #29	PRR15L (ENSOCUG00000017489) #30	PNPO (ENSOCUG00000017484) #31	SP2 (ENSOCUG00000027415) #32	SP6 (ENSOCUG00000023482) #33	SCRN2 (ENSOCUG00000009457) #34	LRRC46 (ENSOCUG00000009453) #35	MRPL10 (ENSOCUG00000009452) #36	OSBPL7 (ENSOCUG00000009447) #37
Pika	MODERN SPECIES	3527												ENSOPRG00000000402	HOXB6 (ENSOPRG00000000399) #18	HOXB5 (ENSOPRG00000000394) #19	HOXB3 (ENSOPRG00000000392) #21	HOXB2 (ENSOPRG00000000389) #22
Tree shrew	MODERN SPECIES	88																HOXB2 (ENSTBEG00000015126) #22	SKAP1 (ENSTBEG00000015048) #24	SNX11 (ENSTBEG00000014960) #25	CBX1 (ENSTBEG00000014931) #26
Primates	ANCESTRAL SPECIES	3	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00950000185410	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Simiiformes	ANCESTRAL SPECIES	7	ENSGT01100000264599	ENSGT00390000007843.v #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00390000007843.v #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603.b #36	ENSGT00940000157439 #37
Hominoidea	ANCESTRAL SPECIES	13	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713.h.b #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603.b #36	ENSGT00940000157439 #37
Hominidae	ANCESTRAL SPECIES	16	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713.h.a #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603.b #36	ENSGT00940000157439 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713.h.a.a.b #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603.b #36	ENSGT00940000157439 #37
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713.h.a.a.b #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603.b #36	ENSGT00940000157439 #37
Pan	ANCESTRAL SPECIES	3	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713.h.a.a.b #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603.b #36	ENSGT00940000157439 #37
Bonobo	MODERN SPECIES	8	SNF8 (ENSPPAG00000030822) #11	ENSPPAG00000029824	ENSPPAG00000001213 #12	ATP5MC1 (ENSPPAG00000039996) #13	CALCOCO2 (ENSPPAG00000037813) #14	TTLL6 (ENSPPAG00000036197) #15	HOXB13 (ENSPPAG00000027794) #16	PRAC1 (ENSPPAG00000014004)	HOXB9 (ENSPPAG00000028486) #17	HOXB8 (ENSPPAG00000034804)	HOXB7 (ENSPPAG00000010963)	HOXB6 (ENSPPAG00000032229) #18	HOXB5 (ENSPPAG00000039181) #19	HOXB4 (ENSPPAG00000040659)	HOXB3 (ENSPPAG00000032630) #21	HOXB2 (ENSPPAG00000027417) #22	HOXB1 (ENSPPAG00000039129) #23	SKAP1 (ENSPPAG00000039277) #24	SNX11 (ENSPPAG00000033185) #25	ENSPPAG00000030413 #26	NFE2L1 (ENSPPAG00000031737) #27	COPZ2 (ENSPPAG00000043351) #28	ENSPPAG00000029145 #29	PRR15L (ENSPPAG00000003316) #30	PNPO (ENSPPAG00000038148) #31	SP2 (ENSPPAG00000027065) #32	SP6 (ENSPPAG00000026169) #33	SCRN2 (ENSPPAG00000028214) #34	LRRC46 (ENSPPAG00000038983) #35	MRPL10 (ENSPPAG00000034452) #36	OSBPL7 (ENSPPAG00000027887) #37
Chimpanzee	MODERN SPECIES	8	UBE2Z (ENSPTRG00000009365) #12	ENSPTRG00000051053	ATP5MC1 (ENSPTRG00000009364) #13	CALCOCO2 (ENSPTRG00000009363) #14	TTLL6 (ENSPTRG00000009361) #15	HOXB13 (ENSPTRG00000009360) #16	PRAC2 (ENSPTRG00000048455)	PRAC1 (ENSPTRG00000009359)	HOXB9 (ENSPTRG00000009358) #17	HOXB8 (ENSPTRG00000048497)	HOXB7 (ENSPTRG00000009357)	HOXB6 (ENSPTRG00000009356) #18	HOXB5 (ENSPTRG00000009355) #19	HOXB4 (ENSPTRG00000009354)	HOXB3 (ENSPTRG00000052423) #21	HOXB2 (ENSPTRG00000009352) #22	HOXB1 (ENSPTRG00000009351) #23	SKAP1 (ENSPTRG00000009350) #24	SNX11 (ENSPTRG00000009349) #25	CBX1 (ENSPTRG00000052115) #26	NFE2L1 (ENSPTRG00000022631) #27	COPZ2 (ENSPTRG00000009346) #28	CDK5RAP3 (ENSPTRG00000009345) #29	PRR15L (ENSPTRG00000047216) #30	PNPO (ENSPTRG00000009343) #31	SP2 (ENSPTRG00000009342) #32	SP6 (ENSPTRG00000009340) #33	SCRN2 (ENSPTRG00000009339) #34	LRRC46 (ENSPTRG00000009338) #35	MRPL10 (ENSPTRG00000009337) #36	OSBPL7 (ENSPTRG00000009336) #37
Human	MODERN SPECIES	8	SNF8 (ENSG00000159210) #11	UBE2Z (ENSG00000159202) #12	ATP5MC1 (ENSG00000159199) #13	CALCOCO2 (ENSG00000136436) #14	TTLL6 (ENSG00000170703) #15	HOXB13 (ENSG00000159184) #16	PRAC2 (ENSG00000229637)	PRAC1 (ENSG00000159182)	HOXB9 (ENSG00000170689) #17	HOXB8 (ENSG00000120068)	HOXB7 (ENSG00000260027)	HOXB6 (ENSG00000108511) #18	HOXB5 (ENSG00000120075) #19	HOXB4 (ENSG00000182742)	HOXB3 (ENSG00000120093) #21	HOXB2 (ENSG00000173917) #22	HOXB1 (ENSG00000120094) #23	SKAP1 (ENSG00000141293) #24	SNX11 (ENSG00000002919) #25	CBX1 (ENSG00000108468) #26	NFE2L1 (ENSG00000082641) #27	COPZ2 (ENSG00000005243) #28	CDK5RAP3 (ENSG00000108465) #29	PRR15L (ENSG00000167183) #30	PNPO (ENSG00000108439) #31	SP2 (ENSG00000167182) #32	SP6 (ENSG00000189120) #33	SCRN2 (ENSG00000141295) #34	LRRC46 (ENSG00000141294) #35	MRPL10 (ENSG00000159111) #36	OSBPL7 (ENSG00000006025) #37
Gorilla	MODERN SPECIES	18	ENSGGOG00000041818 #12	ENSGGOG00000041027	ATP5MC1 (ENSGGOG00000001626) #13	ENSGGOG00000040493	CALCOCO2 (ENSGGOG00000005537) #14	TTLL6 (ENSGGOG00000001947) #15	HOXB13 (ENSGGOG00000001945) #16	ENSGGOG00000042122	PRAC1 (ENSGGOG00000027105)	ENSGGOG00000036688 #17	HOXB8 (ENSGGOG00000039810)	HOXB7 (ENSGGOG00000002637)	HOXB6 (ENSGGOG00000002634) #18	HOXB5 (ENSGGOG00000023582) #19	HOXB3 (ENSGGOG00000012838) #21	HOXB2 (ENSGGOG00000009910) #22	HOXB1 (ENSGGOG00000009904) #23	SKAP1 (ENSGGOG00000012624) #24	ENSGGOG00000025896	CBX1 (ENSGGOG00000024063) #26	NFE2L1 (ENSGGOG00000002268) #27	COPZ2 (ENSGGOG00000002264) #28	ENSGGOG00000022994 #29	PRR15L (ENSGGOG00000037816) #30	PNPO (ENSGGOG00000003786) #31	SP2 (ENSGGOG00000005330) #32	SP6 (ENSGGOG00000036261) #33	SCRN2 (ENSGGOG00000004547) #34	LRRC46 (ENSGGOG00000012667) #35	MRPL10 (ENSGGOG00000015353) #36	OSBPL7 (ENSGGOG00000015344) #37
Orangutan	MODERN SPECIES	8	ENSPPYG00000008911 #11	UBE2Z (ENSPPYG00000032681) #12	ATP5MC1 (ENSPPYG00000008909) #13	CALCOCO2 (ENSPPYG00000008907) #14	TTLL6 (ENSPPYG00000008906) #15	HOXB13 (ENSPPYG00000008904) #16	ENSPPYG00000036609	PRAC1 (ENSPPYG00000008903)	HOXB9 (ENSPPYG00000008902) #17	HOXB8 (ENSPPYG00000038542)	HOXB7 (ENSPPYG00000008901)	HOXB6 (ENSPPYG00000008899) #18	HOXB5 (ENSPPYG00000008898) #19	HOXB4 (ENSPPYG00000008897)	HOXB3 (ENSPPYG00000008896) #21	HOXB2 (ENSPPYG00000008895) #22	HOXB1 (ENSPPYG00000008894) #23	SKAP1 (ENSPPYG00000008893) #24	SNX11 (ENSPPYG00000008892) #25	ENSPPYG00000008891 ##26	NFE2L1 (ENSPPYG00000036998) #27	ENSPPYG00000008889 #28	CDK5RAP3 (ENSPPYG00000008888) #29	PRR15L (ENSPPYG00000008887) #30	PNPO (ENSPPYG00000040967) #31	SP2 (ENSPPYG00000008885) #32	SP6 (ENSPPYG00000008884) #33	SCRN2 (ENSPPYG00000008883) #34	LRRC46 (ENSPPYG00000032761) #35	MRPL10 (ENSPPYG00000008881) #36	OSBPL7 (ENSPPYG00000008880) #37
Gibbon	MODERN SPECIES	105	ENSNLEG00000002931 #7	B4GALNT2 (ENSNLEG00000002844) #8	IGF2BP1 (ENSNLEG00000002786) #9	GIP (ENSNLEG00000002767) #10	SNF8 (ENSNLEG00000002743) #11	ENSNLEG00000002739 #12	ATP5MC1 (ENSNLEG00000002718) #13	CALCOCO2 (ENSNLEG00000002619) #14	TTLL6 (ENSNLEG00000002601) #15	HOXB13 (ENSNLEG00000002594) #16	ENSNLEG00000036120	ENSNLEG00000029075	HOXB6 (ENSNLEG00000002585) #18	HOXB5 (ENSNLEG00000002574) #19	HOXB4 (ENSNLEG00000002570)	HOXB2 (ENSNLEG00000002566) #22	ENSNLEG00000018815 #23	SKAP1 (ENSNLEG00000002519) #24	SNX11 (ENSNLEG00000002479) #25	ENSNLEG00000002435 #26	NFE2L1 (ENSNLEG00000002415) #27	ENSNLEG00000002409 #28	ENSNLEG00000002109 #29	PRR15L (ENSNLEG00000002102) #30	PNPO (ENSNLEG00000002062) #31	ENSNLEG00000002058 #32	SP6 (ENSNLEG00000002050) #33	SCRN2 (ENSNLEG00000001940) #34	LRRC46 (ENSNLEG00000001902) #35	MRPL10 (ENSNLEG00000001803) #36	OSBPL7 (ENSNLEG00000001657) #37
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00390000007843.u.a #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603.b #36	ENSGT00940000157439 #37
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00390000007843.u.a #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603.b #36	ENSGT00940000157439 #37
Vervet Monkey	MODERN SPECIES	7	IGF2BP1 (ENSCSAG00000002487) #9	GIP (ENSCSAG00000002491) #10	SNF8 (ENSCSAG00000002494) #11	UBE2Z (ENSCSAG00000002496) #12	ATP5MC1 (ENSCSAG00000002502) #13	CALCOCO2 (ENSCSAG00000002506) #14	TTLL6 (ENSCSAG00000002511) #15	HOXB13 (ENSCSAG00000002517) #16	HOXB9 (ENSCSAG00000002521) #17	HOXB8 (ENSCSAG00000002523)	HOXB7 (ENSCSAG00000002524)	HOXB6 (ENSCSAG00000002526) #18	HOXB5 (ENSCSAG00000002529) #19	HOXB4 (ENSCSAG00000002530)	HOXB3 (ENSCSAG00000002533) #21	HOXB2 (ENSCSAG00000002536) #22	HOXB1 (ENSCSAG00000002538) #23	ENSCSAG00000019043	SKAP1 (ENSCSAG00000002542) #24	SNX11 (ENSCSAG00000002545) #25	CBX1 (ENSCSAG00000002547) #26	NFE2L1 (ENSCSAG00000002550) #27	COPZ2 (ENSCSAG00000002558) #28	CDK5RAP3 (ENSCSAG00000002562) #29	PRR15L (ENSCSAG00000019042) #30	PNPO (ENSCSAG00000002565) #31	SP2 (ENSCSAG00000002567) #32	SP6 (ENSCSAG00000019041) #33	SCRN2 (ENSCSAG00000002569) #34	LRRC46 (ENSCSAG00000002574) #35	MRPL10 (ENSCSAG00000002576) #36
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603.b #36	ENSGT00940000157439 #37
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00390000007843.u.a #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603.b #36	ENSGT00940000157439 #37
Olive baboon	MODERN SPECIES	8	SNF8 (ENSPANG00000022831) #11	UBE2Z (ENSPANG00000022830) #12	ATP5MC1 (ENSPANG00000022880) #13	CALCOCO2 (ENSPANG00000022881) #14	ENSPANG00000049214	TTLL6 (ENSPANG00000022885) #15	HOXB13 (ENSPANG00000048407) #16	PRAC1 (ENSPANG00000034268)	HOXB9 (ENSPANG00000022896) #17	HOXB8 (ENSPANG00000022895)	HOXB7 (ENSPANG00000041701)	HOXB6 (ENSPANG00000022891) #18	HOXB5 (ENSPANG00000022889) #19	HOXB4 (ENSPANG00000022888)	ENSPANG00000045928	HOXB2 (ENSPANG00000034765) #22	HOXB1 (ENSPANG00000022886) #23	SKAP1 (ENSPANG00000022897) #24	ENSPANG00000026200	SNX11 (ENSPANG00000022898) #25	CBX1 (ENSPANG00000022906) #26	NFE2L1 (ENSPANG00000022904) #27	COPZ2 (ENSPANG00000022903) #28	CDK5RAP3 (ENSPANG00000022902) #29	PNPO (ENSPANG00000022924) #31	SP2 (ENSPANG00000022922) #32	SP6 (ENSPANG00000017158) #33	SCRN2 (ENSPANG00000022920) #34	LRRC46 (ENSPANG00000022918) #35	MRPL10 (ENSPANG00000022926) #36	OSBPL7 (ENSPANG00000022928) #37
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00390000007843.u.a #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603.b #36	ENSGT00940000157439 #37
Drill	MODERN SPECIES	1297	GIP (ENSMLEG00000032963) #10	SNF8 (ENSMLEG00000037501) #11	UBE2Z (ENSMLEG00000043345) #12	ATP5MC1 (ENSMLEG00000026746) #13	CALCOCO2 (ENSMLEG00000034129) #14	TTLL6 (ENSMLEG00000023683) #15	HOXB13 (ENSMLEG00000043860) #16	PRAC1 (ENSMLEG00000033309)	HOXB9 (ENSMLEG00000030602) #17	HOXB8 (ENSMLEG00000007179)	HOXB7 (ENSMLEG00000042331)	HOXB6 (ENSMLEG00000029580) #18	HOXB5 (ENSMLEG00000009970) #19	HOXB3 (ENSMLEG00000026268) #21	HOXB4 (ENSMLEG00000029897)	HOXB2 (ENSMLEG00000031955) #22	HOXB1 (ENSMLEG00000037557) #23	SKAP1 (ENSMLEG00000029308) #24	SNX11 (ENSMLEG00000039008) #25	CBX1 (ENSMLEG00000038745) #26	NFE2L1 (ENSMLEG00000039330) #27	COPZ2 (ENSMLEG00000039090) #28	CDK5RAP3 (ENSMLEG00000033869) #29	PRR15L (ENSMLEG00000020212) #30	PNPO (ENSMLEG00000040872) #31	SP2 (ENSMLEG00000032228) #32	SP6 (ENSMLEG00000027177) #33	SCRN2 (ENSMLEG00000041491) #34	LRRC46 (ENSMLEG00000031583) #35	MRPL10 (ENSMLEG00000042780) #36	OSBPL7 (ENSMLEG00000040663) #37
Sooty mangabey	MODERN SPECIES	564	SNF8 (ENSCATG00000038375) #11	UBE2Z (ENSCATG00000038755) #12	ATP5MC1 (ENSCATG00000030174) #13	CALCOCO2 (ENSCATG00000007708) #14	ENSCATG00000016293	TTLL6 (ENSCATG00000029768) #15	HOXB13 (ENSCATG00000041758) #16	PRAC1 (ENSCATG00000038550)	HOXB9 (ENSCATG00000002169) #17	HOXB8 (ENSCATG00000025318)	HOXB7 (ENSCATG00000042829)	HOXB6 (ENSCATG00000043342) #18	HOXB5 (ENSCATG00000027616) #19	HOXB3 (ENSCATG00000031126) #21	HOXB4 (ENSCATG00000040704)	HOXB2 (ENSCATG00000035238) #22	HOXB1 (ENSCATG00000035575) #23	SKAP1 (ENSCATG00000044458) #24	ENSCATG00000019817	SNX11 (ENSCATG00000030351) #25	ENSCATG00000034735 ##26	NFE2L1 (ENSCATG00000040775) #27	COPZ2 (ENSCATG00000042708) #28	CDK5RAP3 (ENSCATG00000006699) #29	PRR15L (ENSCATG00000020186) #30	PNPO (ENSCATG00000039934) #31	ENSCATG00000003341 #32	SP6 (ENSCATG00000020123) #33	SCRN2 (ENSCATG00000038846) #34	LRRC46 (ENSCATG00000031406) #35	MRPL10 (ENSCATG00000035686) #36
Macaca	ANCESTRAL SPECIES	4	ENSGT00940000159091 #12	ENSGT00940000154298.a.b.e #13	ENSGT00950000183025.a #14	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603.b #36	ENSGT00940000157439 #37
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00390000007843.u.a #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b.e #13	ENSGT00950000183025.a #14	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT01100000263493.a.b.b.a.a.b.b.a.a.a.a.a.a.a.d.a.b.b	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00940000157439 #37
Rhesus	MODERN SPECIES	7	GIP (ENSMMUG00000049405) #10	SNF8 (ENSMMUG00000021087) #11	UBE2Z (ENSMMUG00000057164) #12	ATP5MC1 (ENSMMUG00000013395) #13	ENSMMUG00000016305	TTLL6 (ENSMMUG00000003436) #15	HOXB13 (ENSMMUG00000060879) #16	PRAC1 (ENSMMUG00000053394)	HOXB9 (ENSMMUG00000052505) #17	HOXB8 (ENSMMUG00000020868)	HOXB7 (ENSMMUG00000055324)	HOXB6 (ENSMMUG00000062283) #18	HOXB5 (ENSMMUG00000051420) #19	ENSMMUG00000045203	HOXB4 (ENSMMUG00000052130)	HOXB2 (ENSMMUG00000057001) #22	HOXB1 (ENSMMUG00000022212) #23	SKAP1 (ENSMMUG00000050742) #24	SNX11 (ENSMMUG00000020658) #25	CBX1 (ENSMMUG00000019882) #26	NFE2L1 (ENSMMUG00000021935) #27	COPZ2 (ENSMMUG00000021934) #28	CDK5RAP3 (ENSMMUG00000004760) #29	PRR15L (ENSMMUG00000050551) #30	PNPO (ENSMMUG00000003325) #31	SP2 (ENSMMUG00000004765) #32	ENSMMUG00000053935	SP6 (ENSMMUG00000061952) #33	MRPL10 (ENSMMUG00000021486) #34	LRRC46 (ENSMMUG00000061605) #35	OSBPL7 (ENSMMUG00000019039) #37
Crab-eating macaque	MODERN SPECIES	7	ENSMFAG00000055147	CALCOCO2 (ENSMFAG00000000840) #14	ENSMFAG00000030534	ENSMFAG00000059251	TTLL6 (ENSMFAG00000035518) #15	HOXB13 (ENSMFAG00000039799) #16	PRAC1 (ENSMFAG00000039547)	ENSMFAG00000047612	HOXB9 (ENSMFAG00000062545) #17	HOXB8 (ENSMFAG00000033418)	HOXB7 (ENSMFAG00000039298)	HOXB6 (ENSMFAG00000002294) #18	HOXB5 (ENSMFAG00000042418) #19	HOXB4 (ENSMFAG00000041000)	ENSMFAG00000062776	HOXB2 (ENSMFAG00000034146) #22	HOXB1 (ENSMFAG00000052359) #23	SKAP1 (ENSMFAG00000038763) #24	ENSMFAG00000048147	ENSMFAG00000047205	SNX11 (ENSMFAG00000001845) #25	CBX1 (ENSMFAG00000036790) #26	NFE2L1 (ENSMFAG00000035583) #27	COPZ2 (ENSMFAG00000045896) #28	CDK5RAP3 (ENSMFAG00000046364) #29	PRR15L (ENSMFAG00000030161) #30	PNPO (ENSMFAG00000039285) #31	SP2 (ENSMFAG00000038712) #32	ENSMFAG00000052999	SP6 (ENSMFAG00000030247) #33	ENSMFAG00000030335 #34
Pig-tailed macaque	MODERN SPECIES	494	UBE2Z (ENSMNEG00000040572) #12	ENSMNEG00000011359 #13	ENSMNEG00000027016	CALCOCO2 (ENSMNEG00000041410) #14	TTLL6 (ENSMNEG00000035034) #15	HOXB13 (ENSMNEG00000036275) #16	PRAC2 (ENSMNEG00000038796)	PRAC1 (ENSMNEG00000045191)	HOXB9 (ENSMNEG00000045476) #17	HOXB8 (ENSMNEG00000034944)	HOXB7 (ENSMNEG00000040001)	HOXB6 (ENSMNEG00000042554) #18	HOXB5 (ENSMNEG00000039003) #19	HOXB4 (ENSMNEG00000032435)	HOXB3 (ENSMNEG00000032425) #21	HOXB2 (ENSMNEG00000043416) #22	HOXB1 (ENSMNEG00000036848) #23	ENSMNEG00000033446	SKAP1 (ENSMNEG00000015541) #24	SNX11 (ENSMNEG00000034920) #25	CBX1 (ENSMNEG00000039720) #26	NFE2L1 (ENSMNEG00000037921) #27	COPZ2 (ENSMNEG00000038720) #28	CDK5RAP3 (ENSMNEG00000029039) #29	PRR15L (ENSMNEG00000028174) #30	PNPO (ENSMNEG00000037010) #31	SP2 (ENSMNEG00000029577) #32	SP6 (ENSMNEG00000023861) #33	SCRN2 (ENSMNEG00000031786) #34	LRRC46 (ENSMNEG00000037035) #35	MRPL10 (ENSMNEG00000030905) #36
Rhinopithecus	ANCESTRAL SPECIES	19	ENSGT00390000007843.u.a #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603.b #36	ENSGT00940000157439 #37
Black snub-nosed monkey	MODERN SPECIES	1661	SNF8 (ENSRBIG00000038039) #11	UBE2Z (ENSRBIG00000038578) #12	ATP5MC1 (ENSRBIG00000026711) #13	CALCOCO2 (ENSRBIG00000035235) #14	TTLL6 (ENSRBIG00000035925) #15	HOXB13 (ENSRBIG00000035598) #16	PRAC2 (ENSRBIG00000032698)	PRAC1 (ENSRBIG00000041996)	HOXB9 (ENSRBIG00000035654) #17	HOXB8 (ENSRBIG00000043329)	HOXB7 (ENSRBIG00000039896)	HOXB6 (ENSRBIG00000029050) #18	HOXB5 (ENSRBIG00000015821) #19	HOXB4 (ENSRBIG00000036141)	HOXB3 (ENSRBIG00000036705) #21	HOXB2 (ENSRBIG00000029105) #22	HOXB1 (ENSRBIG00000041849) #23	SKAP1 (ENSRBIG00000042563) #24	SNX11 (ENSRBIG00000030129) #25	ENSRBIG00000027048 #26	NFE2L1 (ENSRBIG00000034817) #27	COPZ2 (ENSRBIG00000038810) #28	CDK5RAP3 (ENSRBIG00000039441) #29	PRR15L (ENSRBIG00000030176) #30	PNPO (ENSRBIG00000042160) #31	SP2 (ENSRBIG00000032526) #32	ENSRBIG00000039530	TXNDC2 (ENSRBIG00000040108)	ENSRBIG00000040735	OCRL (ENSRBIG00000041702)
Golden snub-nosed monkey	MODERN SPECIES	585	GIP (ENSRROG00000029793) #10	SNF8 (ENSRROG00000041052) #11	UBE2Z (ENSRROG00000038314) #12	ATP5MC1 (ENSRROG00000031127) #13	CALCOCO2 (ENSRROG00000042598) #14	TTLL6 (ENSRROG00000044208) #15	HOXB13 (ENSRROG00000042147) #16	PRAC2 (ENSRROG00000033208)	PRAC1 (ENSRROG00000039006)	HOXB9 (ENSRROG00000044654) #17	HOXB8 (ENSRROG00000045349)	HOXB7 (ENSRROG00000035066)	HOXB6 (ENSRROG00000028093) #18	HOXB5 (ENSRROG00000030674) #19	HOXB3 (ENSRROG00000037630) #21	HOXB2 (ENSRROG00000044849) #22	HOXB1 (ENSRROG00000042747) #23	SKAP1 (ENSRROG00000031517) #24	SNX11 (ENSRROG00000029464) #25	CBX1 (ENSRROG00000041227) #26	NFE2L1 (ENSRROG00000044774) #27	COPZ2 (ENSRROG00000030969) #28	CDK5RAP3 (ENSRROG00000044651) #29	PRR15L (ENSRROG00000009484) #30	PNPO (ENSRROG00000044027) #31	SP2 (ENSRROG00000037481) #32	SP6 (ENSRROG00000008983) #33	SCRN2 (ENSRROG00000037252) #34	LRRC46 (ENSRROG00000039559) #35	MRPL10 (ENSRROG00000033938) #36	OSBPL7 (ENSRROG00000017659) #37
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00390000007843.u.a #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Cebidae	ANCESTRAL SPECIES	10	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.u.a #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000154172.gb.b.b.b	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a.t.b #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT01050000247531	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000154172.gb.b.b.b	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Capuchin	MODERN SPECIES	228						HOXB13 (ENSCCAG00000036871) #16	ENSCCAG00000036164	ENSCCAG00000019672	HOXB7 (ENSCCAG00000023947)	HOXB9 (ENSCCAG00000035938) #17	HOXB8 (ENSCCAG00000026051)	HOXB6 (ENSCCAG00000022842) #18	HOXB5 (ENSCCAG00000036867) #19	HOXB4 (ENSCCAG00000020311)	HOXB3 (ENSCCAG00000013598) #21	HOXB2 (ENSCCAG00000024035) #22	HOXB1 (ENSCCAG00000027667) #23	ENSCCAG00000019181	SKAP1 (ENSCCAG00000035663) #24	SNX11 (ENSCCAG00000030167) #25	CBX1 (ENSCCAG00000025085) #26	NFE2L1 (ENSCCAG00000029090) #27	COPZ2 (ENSCCAG00000021292) #28	CDK5RAP3 (ENSCCAG00000038053) #29	PNPO (ENSCCAG00000029175) #31	SP2 (ENSCCAG00000038047) #32	SP6 (ENSCCAG00000020330) #33	SCRN2 (ENSCCAG00000031435) #34	LRRC46 (ENSCCAG00000030568) #35	MRPL10 (ENSCCAG00000023150) #36	OSBPL7 (ENSCCAG00000034097) #37
Bolivian squirrel monkey	MODERN SPECIES	86	ENSSBOG00000028176	UBE2Z (ENSSBOG00000036224) #12	ENSSBOG00000028794	CALCOCO2 (ENSSBOG00000035276) #14	TTLL6 (ENSSBOG00000028908) #15	HOXB13 (ENSSBOG00000029964) #16	PRAC2 (ENSSBOG00000032603)	ENSSBOG00000030794	HOXB9 (ENSSBOG00000030218) #17	HOXB8 (ENSSBOG00000034884)	HOXB7 (ENSSBOG00000020028)	HOXB6 (ENSSBOG00000031900) #18	HOXB5 (ENSSBOG00000018198) #19	HOXB4 (ENSSBOG00000024432)	HOXB3 (ENSSBOG00000030844) #21	HOXB2 (ENSSBOG00000025070) #22	HOXB1 (ENSSBOG00000034875) #23	ENSSBOG00000019520	SKAP1 (ENSSBOG00000029434) #24	SNX11 (ENSSBOG00000026967) #25	ENSSBOG00000031880 ##26	NFE2L1 (ENSSBOG00000023867) #27	COPZ2 (ENSSBOG00000033633) #28	CDK5RAP3 (ENSSBOG00000033272) #29	PRR15L (ENSSBOG00000019240) #30	PNPO (ENSSBOG00000021213) #31	SP2 (ENSSBOG00000029098) #32	SP6 (ENSSBOG00000014210) #33	SCRN2 (ENSSBOG00000027391) #34	LRRC46 (ENSSBOG00000026980) #35	MRPL10 (ENSSBOG00000004214) #36
Marmoset	MODERN SPECIES	17	IGF2BP1 (ENSCJAG00000007258) #9	GIP (ENSCJAG00000007300) #10	SNF8 (ENSCJAG00000007322) #11	UBE2Z (ENSCJAG00000007326) #12	ATP5MC1 (ENSCJAG00000075375) #13	CALCOCO2 (ENSCJAG00000007375) #14	TTLL6 (ENSCJAG00000007395) #15	HOXB13 (ENSCJAG00000007437) #16	HOXB9 (ENSCJAG00000007442) #17	HOXB8 (ENSCJAG00000045730)	HOXB7 (ENSCJAG00000007457)	HOXB6 (ENSCJAG00000007467) #18	HOXB5 (ENSCJAG00000007472) #19	HOXB4 (ENSCJAG00000007480)	HOXB3 (ENSCJAG00000007487) #21	HOXB2 (ENSCJAG00000007494) #22	HOXB1 (ENSCJAG00000007496) #23	ENSCJAG00000038853	SKAP1 (ENSCJAG00000007504) #24	SNX11 (ENSCJAG00000039549) #25	CBX1 (ENSCJAG00000042052) #26	NFE2L1 (ENSCJAG00000007542) #27	ENSCJAG00000058197	COPZ2 (ENSCJAG00000007567) #28	CDK5RAP3 (ENSCJAG00000007669) #29	PRR15L (ENSCJAG00000044487) #30	PNPO (ENSCJAG00000007693) #31	SP2 (ENSCJAG00000007713) #32	SP6 (ENSCJAG00000043946) #33	SCRN2 (ENSCJAG00000047705) #34	LRRC46 (ENSCJAG00000007776) #35
Mas night monkey	MODERN SPECIES	481	SNF8 (ENSANAG00000032764) #11	UBE2Z (ENSANAG00000029636) #12	ATP5MC1 (ENSANAG00000024881) #13	ENSANAG00000020581 #14	TTLL6 (ENSANAG00000031133) #15	PRAC2 (ENSANAG00000025557)	HOXB13 (ENSANAG00000023991) #16	ENSANAG00000030331	HOXB9 (ENSANAG00000035156) #17	HOXB8 (ENSANAG00000028346)	HOXB7 (ENSANAG00000025513)	HOXB6 (ENSANAG00000023964) #18	HOXB5 (ENSANAG00000024299) #19	HOXB4 (ENSANAG00000024005)	HOXB3 (ENSANAG00000032072) #21	HOXB2 (ENSANAG00000023626) #22	HOXB1 (ENSANAG00000032306) #23	ENSANAG00000023400	SKAP1 (ENSANAG00000026853) #24	SNX11 (ENSANAG00000022588) #25	ENSANAG00000036853 ##26	NFE2L1 (ENSANAG00000027606) #27	COPZ2 (ENSANAG00000023309) #28	CDK5RAP3 (ENSANAG00000021880) #29	PNPO (ENSANAG00000026080) #31	SP2 (ENSANAG00000032738) #32	SP6 (ENSANAG00000019338) #33	SCRN2 (ENSANAG00000021482) #34	LRRC46 (ENSANAG00000028496) #35	MRPL10 (ENSANAG00000022792) #36	OSBPL7 (ENSANAG00000021406) #37
Tarsier	MODERN SPECIES	4193										HOXB7 (ENSTSYG00000028173)	HOXB6 (ENSTSYG00000031001) #18	HOXB5 (ENSTSYG00000032912) #19	HOXB4 (ENSTSYG00000026874)	ENSTSYG00000029322	HOXB3 (ENSTSYG00000035231) #21	HOXB2 (ENSTSYG00000004903) #22	HOXB1 (ENSTSYG00000004656) #23
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00950000185410	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590.h #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00950000185410	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590.h #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Mouse lemur	MODERN SPECIES	7	ENSMICG00000013324 #9	GIP (ENSMICG00000013317) #10	SNF8 (ENSMICG00000013305) #11	UBE2Z (ENSMICG00000046102) #12	ENSMICG00000003414	CALCOCO2 (ENSMICG00000015330) #14	TTLL6 (ENSMICG00000007549) #15	HOXB13 (ENSMICG00000007546) #16	HOXB9 (ENSMICG00000038413) #17	HOXB8 (ENSMICG00000045961)	HOXB7 (ENSMICG00000007539)	HOXB6 (ENSMICG00000042216) #18	HOXB5 (ENSMICG00000047139) #19	HOXB4 (ENSMICG00000043173)	HOXB3 (ENSMICG00000007522) #21	HOXB2 (ENSMICG00000038222) #22	HOXB1 (ENSMICG00000048152) #23	SKAP1 (ENSMICG00000047158) #24	ENSMICG00000029923	SNX11 (ENSMICG00000014741) #25	NFE2L1 (ENSMICG00000014716) #27	ENSMICG00000009510 #26	COPZ2 (ENSMICG00000014097) #28	CDK5RAP3 (ENSMICG00000014077) #29	ENSMICG00000014065 #31	SP2 (ENSMICG00000036051) #32	SP6 (ENSMICG00000047695) #33	SCRN2 (ENSMICG00000004823) #34	LRRC46 (ENSMICG00000004816) #35	MRPL10 (ENSMICG00000048091) #36	OSBPL7 (ENSMICG00000004799) #37
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00950000185410	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590.h #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Coquerels sifaka	MODERN SPECIES	120	IGF2BP1 (ENSPCOG00000006475) #9	GIP (ENSPCOG00000024832) #10	SNF8 (ENSPCOG00000026895) #11	UBE2Z (ENSPCOG00000014816) #12	ENSPCOG00000008741	CALCOCO2 (ENSPCOG00000021998) #14	TTLL6 (ENSPCOG00000021391) #15	HOXB13 (ENSPCOG00000018182) #16	HOXB9 (ENSPCOG00000027130) #17	HOXB8 (ENSPCOG00000024853)	HOXB7 (ENSPCOG00000028248)	HOXB6 (ENSPCOG00000019931) #18	HOXB5 (ENSPCOG00000015692) #19	HOXB4 (ENSPCOG00000022963)	HOXB3 (ENSPCOG00000020113) #21	HOXB2 (ENSPCOG00000017380) #22	HOXB1 (ENSPCOG00000025930) #23	SKAP1 (ENSPCOG00000022221) #24	SNX11 (ENSPCOG00000011015) #25	ENSPCOG00000010902 #26	NFE2L1 (ENSPCOG00000021740) #27	COPZ2 (ENSPCOG00000018359) #28	CDK5RAP3 (ENSPCOG00000016598) #29	PNPO (ENSPCOG00000017906) #31	SP2 (ENSPCOG00000017198) #32	SP6 (ENSPCOG00000008529) #33	SCRN2 (ENSPCOG00000014438) #34	LRRC46 (ENSPCOG00000015829) #35	MRPL10 (ENSPCOG00000025492) #36	OSBPL7 (ENSPCOG00000019714) #37	TBX21 (ENSPCOG00000014387)
Greater bamboo lemur	MODERN SPECIES	168	IGF2BP1 (ENSPSMG00000020445) #9	GIP (ENSPSMG00000020432) #10	SNF8 (ENSPSMG00000020426) #11	UBE2Z (ENSPSMG00000020387) #12	ENSPSMG00000020369	CALCOCO2 (ENSPSMG00000020308) #14	ENSPSMG00000020243 #15	HOXB13 (ENSPSMG00000020237) #16	HOXB9 (ENSPSMG00000020232) #17	HOXB8 (ENSPSMG00000020227)	HOXB7 (ENSPSMG00000020218)	HOXB6 (ENSPSMG00000020209) #18	HOXB5 (ENSPSMG00000020200) #19	HOXB4 (ENSPSMG00000020187)	HOXB3 (ENSPSMG00000020182) #21	HOXB2 (ENSPSMG00000020176) #22	HOXB1 (ENSPSMG00000020167) #23	SKAP1 (ENSPSMG00000020161) #24	SNX11 (ENSPSMG00000020139) #25	CBX1 (ENSPSMG00000020119) #26
Bushbaby	MODERN SPECIES	133	GIP (ENSOGAG00000010130) #10	ENSOGAG00000001269 #11	UBE2Z (ENSOGAG00000001267) #12	ATP5MC1 (ENSOGAG00000011713) #13	CALCOCO2 (ENSOGAG00000011709) #14	TTLL6 (ENSOGAG00000011701) #15	HOXB13 (ENSOGAG00000032643) #16	ENSOGAG00000034464	HOXB9 (ENSOGAG00000008668) #17	HOXB8 (ENSOGAG00000029480)	HOXB7 (ENSOGAG00000008667)	HOXB6 (ENSOGAG00000008661) #18	HOXB5 (ENSOGAG00000032432) #19	HOXB4 (ENSOGAG00000033709)	HOXB3 (ENSOGAG00000032090) #21	HOXB2 (ENSOGAG00000029280) #22	HOXB1 (ENSOGAG00000031645) #23	SKAP1 (ENSOGAG00000015855) #24	SNX11 (ENSOGAG00000015854) #25	CBX1 (ENSOGAG00000005658) #26	NFE2L1 (ENSOGAG00000025191) #27	COPZ2 (ENSOGAG00000004954) #28	CDK5RAP3 (ENSOGAG00000004951) #29	PRR15L (ENSOGAG00000006187) #30	PNPO (ENSOGAG00000006186) #31	SP2 (ENSOGAG00000030380) #32	SP6 (ENSOGAG00000030282) #33	SCRN2 (ENSOGAG00000006181) #34	LRRC46 (ENSOGAG00000006177) #35	MRPL10 (ENSOGAG00000006173) #36	OSBPL7 (ENSOGAG00000006166) #37
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00950000185410	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155029.c.b #22
Common shrew	MODERN SPECIES	5391																HOXB2 (ENSSARG00000008539) #22
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00950000185410	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00950000185410	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Suina	ANCESTRAL SPECIES		ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Chacoan peccary	MODERN SPECIES	145	IGF2BP1 (ENSCWAG00000022044) #9	GIP (ENSCWAG00000022046) #10	SNF8 (ENSCWAG00000022048) #11	UBE2Z (ENSCWAG00000022050) #12	ATP5MC1 (ENSCWAG00000022052) #13	CALCOCO2 (ENSCWAG00000022056) #14	TTLL6 (ENSCWAG00000022059) #15	HOXB13 (ENSCWAG00000022063) #16	HOXB9 (ENSCWAG00000022065) #17	HOXB8 (ENSCWAG00000022066)	HOXB7 (ENSCWAG00000022067)	HOXB6 (ENSCWAG00000022069) #18	HOXB5 (ENSCWAG00000022071) #19	HOXB4 (ENSCWAG00000022074)	HOXB3 (ENSCWAG00000022077) #21	HOXB2 (ENSCWAG00000022078) #22	HOXB1 (ENSCWAG00000022080) #23	SKAP1 (ENSCWAG00000000046) #24	SNX11 (ENSCWAG00000000070) #25	CBX1 (ENSCWAG00000000121) #26	NFE2L1 (ENSCWAG00000000185) #27	COPZ2 (ENSCWAG00000000341) #28	CDK5RAP3 (ENSCWAG00000000377) #29	PRR15L (ENSCWAG00000000410) #30	PNPO (ENSCWAG00000000427) #31	SP2 (ENSCWAG00000000474) #32	SP6 (ENSCWAG00000000502) #33	SCRN2 (ENSCWAG00000000520) #34	LRRC46 (ENSCWAG00000000570) #35	MRPL10 (ENSCWAG00000000589) #36	OSBPL7 (ENSCWAG00000000623) #37
Pig	MODERN SPECIES	3	IGF2BP1 (ENSSSCG00000023128) #9	GIP (ENSSSCG00000026330) #10	SNF8 (ENSSSCG00000021461) #11	UBE2Z (ENSSSCG00000025638) #12	ATP5MC1 (ENSSSCG00000017544) #13	CALCOCO2 (ENSSSCG00000017543) #14	TTLL6 (ENSSSCG00000017542) #15	HOXB13 (ENSSSCG00000017541) #16	HOXB9 (ENSSSCG00000061856) #17	HOXB8 (ENSSSCG00000017537)	HOXB7 (ENSSSCG00000017538)	HOXB6 (ENSSSCG00000017539) #18	HOXB5 (ENSSSCG00000017540) #19	HOXB4 (ENSSSCG00000017535)	HOXB3 (ENSSSCG00000017534) #21	HOXB2 (ENSSSCG00000017533) #22	HOXB1 (ENSSSCG00000017532) #23	SKAP1 (ENSSSCG00000017527) #24	SNX11 (ENSSSCG00000017528) #25	CBX1 (ENSSSCG00000017529) #26	NFE2L1 (ENSSSCG00000017525) #27	COPZ2 (ENSSSCG00000017526) #28	CDK5RAP3 (ENSSSCG00000017524) #29	PRR15L (ENSSSCG00000054179) #30	PNPO (ENSSSCG00000032782) #31	SP2 (ENSSSCG00000017516) #32	SP6 (ENSSSCG00000017522) #33	SCRN2 (ENSSSCG00000017521) #34	LRRC46 (ENSSSCG00000017520) #35	MRPL10 (ENSSSCG00000017519) #36	OSBPL7 (ENSSSCG00000017518) #37
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00950000185410	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Camelidae	ANCESTRAL SPECIES	60	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.a.a ##26	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00950000185410	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Arabian camel	MODERN SPECIES	7	IGF2BP1 (ENSCDRG00005016778) #9	GIP (ENSCDRG00005016991) #10	ENSCDRG00005017040 #11	ENSCDRG00005017061	UBE2Z (ENSCDRG00005017075) #12	ENSCDRG00005017142	CALCOCO2 (ENSCDRG00005017213) #14	TTLL6 (ENSCDRG00005017585) #15	HOXB13 (ENSCDRG00005017741) #16	HOXB9 (ENSCDRG00005017862) #17	HOXB7 (ENSCDRG00005018007)	HOXB6 (ENSCDRG00005018029) #18	HOXB5 (ENSCDRG00005018055) #19	HOXB4 (ENSCDRG00005018079)	HOXB3 (ENSCDRG00005018104) #21	HOXB2 (ENSCDRG00005018121) #22	HOXB1 (ENSCDRG00005018147) #23	SKAP1 (ENSCDRG00005018166) #24	SNX11 (ENSCDRG00005018232) #25	CBX1 (ENSCDRG00005018330) ##26	NFE2L1 (ENSCDRG00005018357) #27	ENSCDRG00005018515	COPZ2 (ENSCDRG00005018538) #28	CDK5RAP3 (ENSCDRG00005018564) #29	PRR15L (ENSCDRG00005018636) #30	SP2 (ENSCDRG00005018756) #32	SP6 (ENSCDRG00005018791) #33	SCRN2 (ENSCDRG00005018805) #34	LRRC46 (ENSCDRG00005018865) #35	MRPL10 (ENSCDRG00005018906) #36	OSBPL7 (ENSCDRG00005018943) #37
Alpaca	MODERN SPECIES	3027																HOXB2 (ENSVPAG00000010121) #22	SKAP1 (ENSVPAG00000010119) #24	CBX1 (ENSVPAG00000010117) #26	NFE2L1 (ENSVPAG00000010116) #27
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00950000185410	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Cetacea	ANCESTRAL SPECIES	5	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.g	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.g	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.g	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Dolphin	MODERN SPECIES	4465									HOXB9 (ENSTTRG00000012262) #17	HOXB8 (ENSTTRG00000012260)	ENSTTRG00000012257	HOXB6 (ENSTTRG00000012252) #18	HOXB5 (ENSTTRG00000012251) #19	HOXB4 (ENSTTRG00000012249)	HOXB3 (ENSTTRG00000012246) #21	HOXB2 (ENSTTRG00000012244) #22	HOXB1 (ENSTTRG00000012240) #23
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.g	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.g	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Beluga whale	MODERN SPECIES	26	IGF2BP1 (ENSDLEG00000004887) #9	GIP (ENSDLEG00000004882) #10	SNF8 (ENSDLEG00000004876) #11	UBE2Z (ENSDLEG00000004871) #12	ATP5G1 (ENSDLEG00000004867)	CALCOCO2 (ENSDLEG00000004861) #14	TTLL6 (ENSDLEG00000004850) #15	HOXB13 (ENSDLEG00000004844) #16	HOXB9 (ENSDLEG00000004838) #17	HOXB8 (ENSDLEG00000004837)	HOXB7 (ENSDLEG00000004834)	HOXB6 (ENSDLEG00000004829) #18	HOXB5 (ENSDLEG00000004826) #19	HOXB4 (ENSDLEG00000004820)	HOXB3 (ENSDLEG00000004817) #21	HOXB2 (ENSDLEG00000004813) #22	HOXB1 (ENSDLEG00000004807) #23	SKAP1 (ENSDLEG00000004779) #24	SNX11 (ENSDLEG00000004765) #25	CBX1 (ENSDLEG00000004754) ##26	NFE2L1 (ENSDLEG00000004744) #27	ENSDLEG00000004734	COPZ2 (ENSDLEG00000004721) #28	CDK5RAP3 (ENSDLEG00000004709) #29	PRR15L (ENSDLEG00000004704) #30	PNPO (ENSDLEG00000004701) #31	SP2 (ENSDLEG00000004697) #32	SP6 (ENSDLEG00000004694) #33	SCRN2 (ENSDLEG00000004688) #34	ENSDLEG00000004684	MRPL10 (ENSDLEG00000004678) #36
Narwhal	MODERN SPECIES	316	IGF2BP1 (ENSMMNG00015022053) #9	GIP (ENSMMNG00015022055) #10	ENSMMNG00015022056 #11	UBE2Z (ENSMMNG00015022057) #12	ENSMMNG00015022058	CALCOCO2 (ENSMMNG00015022060) #14	TTLL6 (ENSMMNG00015015987) #15	HOXB13 (ENSMMNG00015016080) #16	HOXB9 (ENSMMNG00015016160) #17	HOXB8 (ENSMMNG00015016175)	HOXB7 (ENSMMNG00015016197)	HOXB6 (ENSMMNG00015016215) #18	HOXB5 (ENSMMNG00015016235) #19	HOXB4 (ENSMMNG00015016252)	HOXB3 (ENSMMNG00015016287) #21	HOXB2 (ENSMMNG00015016324) #22	HOXB1 (ENSMMNG00015016356) #23	SKAP1 (ENSMMNG00015016386) #24	SNX11 (ENSMMNG00015016452) #25	CBX1 (ENSMMNG00015016582) #26	NFE2L1 (ENSMMNG00015016634) #27	COPZ2 (ENSMMNG00015016743) #28	CDK5RAP3 (ENSMMNG00015016820) #29	PRR15L (ENSMMNG00015016868) #30	PNPO (ENSMMNG00015016895) #31	SP2 (ENSMMNG00015016948) #32	SP6 (ENSMMNG00015016969) #33	SCRN2 (ENSMMNG00015016985) #34	LRRC46 (ENSMMNG00015017038) #35	MRPL10 (ENSMMNG00015017084) #36	OSBPL7 (ENSMMNG00015017115) #37
Vaquita	MODERN SPECIES	12	IGF2BP1 (ENSPSNG00000016168) #9	GIP (ENSPSNG00000016483) #10	SNF8 (ENSPSNG00000016533) #11	UBE2Z (ENSPSNG00000016576) #12	ENSPSNG00000016635	CALCOCO2 (ENSPSNG00000016749) #14	TTLL6 (ENSPSNG00000017015) #15	HOXB13 (ENSPSNG00000017233) #16	HOXB9 (ENSPSNG00000017398) #17	HOXB8 (ENSPSNG00000017436)	HOXB7 (ENSPSNG00000017482)	HOXB6 (ENSPSNG00000017525) #18	HOXB5 (ENSPSNG00000017559) #19	HOXB4 (ENSPSNG00000017604)	HOXB3 (ENSPSNG00000017636) #21	HOXB2 (ENSPSNG00000017708) #22	HOXB1 (ENSPSNG00000017728) #23	SKAP1 (ENSPSNG00000017760) #24	SNX11 (ENSPSNG00000017889) #25	ENSPSNG00000017984 #26	NFE2L1 (ENSPSNG00000018052) #27	COPZ2 (ENSPSNG00000018262) #28	CDK5RAP3 (ENSPSNG00000018321) #29	PRR15L (ENSPSNG00000018399) #30	PNPO (ENSPSNG00000018423) #31	SP2 (ENSPSNG00000018528) #32	SP6 (ENSPSNG00000018568) #33	SCRN2 (ENSPSNG00000018588) #34	LRRC46 (ENSPSNG00000018676) #35	ENSPSNG00000018757	OSBPL7 (ENSPSNG00000018799) #37
Sperm whale	MODERN SPECIES	5	IGF2BP1 (ENSPCTG00005004404) #9	GIP (ENSPCTG00005004443) #10	ENSPCTG00005004464	SNF8 (ENSPCTG00005004481) #11	ATP5MC1 (ENSPCTG00005004516) #12	CALCOCO2 (ENSPCTG00005004611) #14	TTLL6 (ENSPCTG00005004739) #15	HOXB13 (ENSPCTG00005004788) #16	HOXB9 (ENSPCTG00005004847) #17	HOXB8 (ENSPCTG00005004864)	HOXB7 (ENSPCTG00005004882)	HOXB6 (ENSPCTG00005004887) #18	HOXB5 (ENSPCTG00005004905) #19	HOXB4 (ENSPCTG00005004920)	HOXB3 (ENSPCTG00005004930) #21	HOXB2 (ENSPCTG00005004951) #22	HOXB1 (ENSPCTG00005004966) #23	SKAP1 (ENSPCTG00005004985) #24	CBX1 (ENSPCTG00005005034) #26	ENSPCTG00005005083 #32	TBX21 (ENSPCTG00005005105)	TBKBP1 (ENSPCTG00005005144)	KPNB1 (ENSPCTG00005005195)	NPEPPS (ENSPCTG00005005245)	GPR179 (ENSPCTG00005005545)	SOCS7 (ENSPCTG00005005634)	ARHGAP23 (ENSPCTG00005005753)	SRCIN1 (ENSPCTG00005005823)	ENSPCTG00005006189	PSMB3 (ENSPCTG00005006224)	PIP4K2B (ENSPCTG00005006258)
Blue whale	MODERN SPECIES	12	GIP (ENSBMSG00010017026) #10	SNF8 (ENSBMSG00010017067) #11	UBE2Z (ENSBMSG00010017102) #12	ATP5MC1 (ENSBMSG00010017142) #13	ENSBMSG00010017179	CALCOCO2 (ENSBMSG00010017255) #14	TTLL6 (ENSBMSG00010017444) #15	HOXB13 (ENSBMSG00010017547) #16	HOXB9 (ENSBMSG00010017655) #17	HOXB8 (ENSBMSG00010017685)	HOXB7 (ENSBMSG00010017724)	HOXB6 (ENSBMSG00010017746) #18	HOXB5 (ENSBMSG00010017772) #19	HOXB4 (ENSBMSG00010017814)	HOXB3 (ENSBMSG00010017838) #21	HOXB2 (ENSBMSG00010017860) #22	HOXB1 (ENSBMSG00010017892) #23	SKAP1 (ENSBMSG00010017921) #24	SNX11 (ENSBMSG00010018006) #25	CBX1 (ENSBMSG00010018099) #26	NFE2L1 (ENSBMSG00010018163) #27	COPZ2 (ENSBMSG00010018306) #28	CDK5RAP3 (ENSBMSG00010018481) #29	PRR15L (ENSBMSG00010018513) #30	PNPO (ENSBMSG00010018544) #31	SP2 (ENSBMSG00010018607) #32	SP6 (ENSBMSG00010018628) #33	ENSBMSG00010018650	ENSBMSG00010018673	ENSBMSG00010018688	ENSBMSG00010018708
Pecora	ANCESTRAL SPECIES	1	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00950000185410	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Yarkand deer	MODERN SPECIES	28	GIP (ENSCHYG00000004425) #10	SNF8 (ENSCHYG00000004443) #11	UBE2Z (ENSCHYG00000004456) #12	ENSCHYG00000004476	ENSCHYG00000004493	ENSCHYG00000004521 #14	TTLL6 (ENSCHYG00000004571) #15	HOXB13 (ENSCHYG00000004599) #16	HOXB9 (ENSCHYG00000004623) #17	HOXB8 (ENSCHYG00000004637)	HOXB7 (ENSCHYG00000004645)	HOXB6 (ENSCHYG00000004651) #18	HOXB5 (ENSCHYG00000004658) #19	HOXB4 (ENSCHYG00000004668)	HOXB3 (ENSCHYG00000004670) #21	HOXB2 (ENSCHYG00000004674) #22	HOXB1 (ENSCHYG00000004684) #23	SKAP1 (ENSCHYG00000004692) #24	ENSCHYG00000004720	SNX11 (ENSCHYG00000004737) #25	CBX1 (ENSCHYG00000004750) #26	NFE2L1 (ENSCHYG00000004781) #27	COPZ2 (ENSCHYG00000004829) #28	ENSCHYG00000004851	CDK5RAP3 (ENSCHYG00000000101) #29	PRR15L (ENSCHYG00000000125) #30	PNPO (ENSCHYG00000000157) #31	SP2 (ENSCHYG00000000198) #32	SP6 (ENSCHYG00000000221) #33	SCRN2 (ENSCHYG00000000227) #34	LRRC46 (ENSCHYG00000000251) #35
Percora_a	ANCESTRAL SPECIES	2	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Siberian musk deer	MODERN SPECIES	1210	GIP (ENSMMSG00000024503) #10	ENSMMSG00000024504 #11	UBE2Z (ENSMMSG00000024505) #12	ATP5MC1 (ENSMMSG00000024506) #13	CALCOCO2 (ENSMMSG00000024509) #14	TTLL6 (ENSMMSG00000024514) #15	HOXB13 (ENSMMSG00000024516) #16	HOXB9 (ENSMMSG00000024520) #17	HOXB8 (ENSMMSG00000024522)	HOXB7 (ENSMMSG00000024523)	HOXB6 (ENSMMSG00000024525) #18	HOXB5 (ENSMMSG00000024526) #19	HOXB4 (ENSMMSG00000024528)	ENSMMSG00000024530	HOXB3 (ENSMMSG00000024531) #21	HOXB2 (ENSMMSG00000024532) #22	HOXB1 (ENSMMSG00000024533) #23	ENSMMSG00000024535	SKAP1 (ENSMMSG00000024536) #24	SNX11 (ENSMMSG00000024538) #25	CBX1 (ENSMMSG00000024540) #26	NFE2L1 (ENSMMSG00000024541) #27	COPZ2 (ENSMMSG00000024546) #28	CDK5RAP3 (ENSMMSG00000024548) #29	PRR15L (ENSMMSG00000024549) #30	PNPO (ENSMMSG00000024550) #31	SP2 (ENSMMSG00000024551) #32	SP6 (ENSMMSG00000018224) #33	SCRN2 (ENSMMSG00000018238) #34	LRRC46 (ENSMMSG00000018351) #35	MRPL10 (ENSMMSG00000018396) #36
Bovidae	ANCESTRAL SPECIES	2	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Caprinae	ANCESTRAL SPECIES	1	ENSGT00390000005121 #10	ENSGT00390000007843.g.a #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000154688.b.j	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Rambouillet Sheep	MODERN SPECIES	2	IGF2BP1 (ENSOARG00020022766) #9	GIP (ENSOARG00020022695) #10	UBE2Z (ENSOARG00020022664) #12	ATP5MC1 (ENSOARG00020022590)	CALCOCO2 (ENSOARG00020022295) #14	ENSOARG00020022258 #15	SNF8 (ENSOARG00020022227) #11	HOXB13 (ENSOARG00020022195) #16	HOXB9 (ENSOARG00020022138) #17	HOXB8 (ENSOARG00020022064)	HOXB7 (ENSOARG00020022042)	HOXB6 (ENSOARG00020022021) #18	HOXB5 (ENSOARG00020022004) #19	HOXB4 (ENSOARG00020021954)	HOXB3 (ENSOARG00020021943) #21	HOXB2 (ENSOARG00020021907) #22	HOXB1 (ENSOARG00020021886) #23	SKAP1 (ENSOARG00020021817) #24	SNX11 (ENSOARG00020021783) #25	CBX1 (ENSOARG00020021741) #26	NFE2L1 (ENSOARG00020021460) #27	COPZ2 (ENSOARG00020021377) #28	CDK5RAP3 (ENSOARG00020021339) #29	PRR15L (ENSOARG00020021319) #30	PNPO (ENSOARG00020021017) #31	SP2 (ENSOARG00020020972) #32	SP6 (ENSOARG00020020944) #33	SCRN2 (ENSOARG00020020770) #34	LRRC46 (ENSOARG00020020663) #35	MRPL10 (ENSOARG00020020614) #36	OSBPL7 (ENSOARG00020020494) #37
Goat	MODERN SPECIES	10	GIP (ENSCHIG00000010936) #10	SNF8 (ENSCHIG00000014794) #11	ENSCHIG00000020962	UBE2Z (ENSCHIG00000003883) #12	ENSCHIG00000016881	CALCOCO2 (ENSCHIG00000025313) #14	TTLL6 (ENSCHIG00000022654) #15	HOXB13 (ENSCHIG00000026703) #16	HOXB9 (ENSCHIG00000022791) #17	HOXB8 (ENSCHIG00000015504)	HOXB7 (ENSCHIG00000017532)	HOXB6 (ENSCHIG00000008881) #18	HOXB5 (ENSCHIG00000023147) #19	HOXB4 (ENSCHIG00000025323)	HOXB3 (ENSCHIG00000013978) #21	HOXB2 (ENSCHIG00000025836) #22	HOXB1 (ENSCHIG00000017872) #23	ENSCHIG00000010180	ENSCHIG00000015920 #24	ENSCHIG00000026878 #24	SNX11 (ENSCHIG00000017547) #25	CBX1 (ENSCHIG00000010985) #26	NFE2L1 (ENSCHIG00000015427) #27	COPZ2 (ENSCHIG00000026544) #28	CDK5RAP3 (ENSCHIG00000025420) #29	PRR15L (ENSCHIG00000008261) #30	PNPO (ENSCHIG00000004606) #31	SP2 (ENSCHIG00000018648) #32	SP6 (ENSCHIG00000009897) #33	SCRN2 (ENSCHIG00000026802) #34	LRRC46 (ENSCHIG00000015497) #35
Bovinae	ANCESTRAL SPECIES		ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
American bison	MODERN SPECIES	3101	B4GALNT2 (ENSBBBG00000021305) #8	IGF2BP1 (ENSBBBG00000021334) #9	GIP (ENSBBBG00000021349) #10	SNF8 (ENSBBBG00000021356) #11	UBE2Z (ENSBBBG00000021371) #12	ATP5MC1 (ENSBBBG00000021377) #13	CALCOCO2 (ENSBBBG00000005726) #14	TTLL6 (ENSBBBG00000021540) #15	HOXB13 (ENSBBBG00000021546) #16	HOXB9 (ENSBBBG00000021558) #17	HOXB7 (ENSBBBG00000021565)	HOXB6 (ENSBBBG00000021567) #18	HOXB5 (ENSBBBG00000021577) #19	HOXB4 (ENSBBBG00000021585)	HOXB3 (ENSBBBG00000005740) #21	HOXB2 (ENSBBBG00000021598) #22	HOXB1 (ENSBBBG00000021601) #23	SKAP1 (ENSBBBG00000021634) #24	SNX11 (ENSBBBG00000021652) #25	ENSBBBG00000021675 ##26	NFE2L1 (ENSBBBG00000021740) #27	COPZ2 (ENSBBBG00000021782) #28	CDK5RAP3 (ENSBBBG00000021808) #29	PRR15L (ENSBBBG00000021809) #30	PNPO (ENSBBBG00000021862) #31	SP2 (ENSBBBG00000021914) #32	SP6 (ENSBBBG00000021924) #33	SCRN2 (ENSBBBG00000021958) #34	LRRC46 (ENSBBBG00000021972) #35	MRPL10 (ENSBBBG00000021983) #36	OSBPL7 (ENSBBBG00000022056) #37
Bos	ANCESTRAL SPECIES	1	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000154688.b.k.a	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.i #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590.e.b #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Bos_b	ANCESTRAL SPECIES	15	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000154688.b.k.a	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.i #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590.e.b #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Cow	MODERN SPECIES	10	IGF2BP1 (ENSBTAG00000011736) #9	GIP (ENSBTAG00000005045) #10	SNF8 (ENSBTAG00000018803) #11	UBE2Z (ENSBTAG00000018802) #12	ATP5MC1 (ENSBTAG00000018339)	CALCOCO2 (ENSBTAG00000007935) #14	TTLL6 (ENSBTAG00000009332) #15	HOXB13 (ENSBTAG00000014663) #16	HOXB9 (ENSBTAG00000054623) #17	HOXB8 (ENSBTAG00000054162)	HOXB7 (ENSBTAG00000005546)	HOXB6 (ENSBTAG00000050006) #18	HOXB5 (ENSBTAG00000045835) #19	HOXB4 (ENSBTAG00000039599)	HOXB3 (ENSBTAG00000021427) #21	HOXB2 (ENSBTAG00000009979) #22	HOXB1 (ENSBTAG00000007603) #23	SKAP1 (ENSBTAG00000000641) #24	SNX11 (ENSBTAG00000020321) #25	CBX1 (ENSBTAG00000002949) #26	NFE2L1 (ENSBTAG00000013653) #27	COPZ2 (ENSBTAG00000039954) #28	CDK5RAP3 (ENSBTAG00000014202) #29	PRR15L (ENSBTAG00000012249) #30	PNPO (ENSBTAG00000012259) #31	SP2 (ENSBTAG00000013740) #32	SP6 (ENSBTAG00000001825) #33	SCRN2 (ENSBTAG00000001828) #34	LRRC46 (ENSBTAG00000001830) #35	MRPL10 (ENSBTAG00000001832) #36	OSBPL7 (ENSBTAG00000013523) #37
Hybrid Bos Indicus	MODERN SPECIES	10	IGF2BP1 (ENSBIXG00005007917) #9	GIP (ENSBIXG00005007892) #10	SNF8 (ENSBIXG00005007866) #11	UBE2Z (ENSBIXG00005029277) #12	ENSBIXG00005029305	CALCOCO2 (ENSBIXG00005029366) #14	ENSBIXG00005029447 #15	HOXB13 (ENSBIXG00005029474) #16	HOXB9 (ENSBIXG00005029519) #17	HOXB8 (ENSBIXG00005029530)	HOXB7 (ENSBIXG00005029546)	HOXB6 (ENSBIXG00005029554) #18	HOXB5 (ENSBIXG00005029559) #19	HOXB4 (ENSBIXG00005029577)	HOXB3 (ENSBIXG00005029591) #21	HOXB2 (ENSBIXG00005029607) #22	HOXB1 (ENSBIXG00005029618) #23	ENSBIXG00005029636	SKAP1 (ENSBIXG00005029657) #24	SNX11 (ENSBIXG00005029679) #25	CBX1 (ENSBIXG00005029691) #26	NFE2L1 (ENSBIXG00005029748) #27	COPZ2 (ENSBIXG00005029862) #28	CDK5RAP3 (ENSBIXG00005029886) #29	PRR15L (ENSBIXG00005029905) #30	PNPO (ENSBIXG00005029918) #31	ENSBIXG00005029934 #32	SP6 (ENSBIXG00005029948) #33	SCRN2 (ENSBIXG00005029976) #34	LRRC46 (ENSBIXG00005030008) #35	MRPL10 (ENSBIXG00005030023) #36
Bos_a	ANCESTRAL SPECIES		ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000154688.b.k.a	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b.i #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590.e.b #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Wild yak	MODERN SPECIES	319	IGF2BP1 (ENSBMUG00000000549) #9	GIP (ENSBMUG00000000594) #10	SNF8 (ENSBMUG00000000607) #11	UBE2Z (ENSBMUG00000000624) #12	ENSBMUG00000000644	CALCOCO2 (ENSBMUG00000000720) #14	ENSBMUG00000000753 #15	HOXB13 (ENSBMUG00000000770) #16	HOXB9 (ENSBMUG00000000804) #17	HOXB8 (ENSBMUG00000000824)	HOXB7 (ENSBMUG00000000832)	HOXB6 (ENSBMUG00000000839) #18	HOXB5 (ENSBMUG00000000849) #19	HOXB4 (ENSBMUG00000000867)	HOXB3 (ENSBMUG00000000876) #21	HOXB2 (ENSBMUG00000000885) #22	HOXB1 (ENSBMUG00000000891) #23	ENSBMUG00000000901	SKAP1 (ENSBMUG00000000925) #24	SNX11 (ENSBMUG00000000953) #25	CBX1 (ENSBMUG00000000974) #26	NFE2L1 (ENSBMUG00000001054) #27	COPZ2 (ENSBMUG00000001081) #28	CDK5RAP3 (ENSBMUG00000001110) #29	ENSBMUG00000001125 #30	PNPO (ENSBMUG00000001160) #31	SP2 (ENSBMUG00000001179) #32
Domestic yak	MODERN SPECIES	10	B4GALNT2 (ENSBGRG00000022672) #8	IGF2BP1 (ENSBGRG00000022442) #9	GIP (ENSBGRG00000022397) #10	SNF8 (ENSBGRG00000022296) #11	UBE2Z (ENSBGRG00000022223) #12	ENSBGRG00000022156	CALCOCO2 (ENSBGRG00000021810) #14	TTLL6 (ENSBGRG00000021744) #15	HOXB13 (ENSBGRG00000021718) #16	HOXB9 (ENSBGRG00000021683) #17	HOXB8 (ENSBGRG00000021618)	HOXB6 (ENSBGRG00000021579) #18	HOXB5 (ENSBGRG00000021555) #19	HOXB4 (ENSBGRG00000021501)	HOXB3 (ENSBGRG00000021464) #21	HOXB2 (ENSBGRG00000021425) #22	HOXB1 (ENSBGRG00000021404) #23	SKAP1 (ENSBGRG00000021202) #24	SNX11 (ENSBGRG00000021141) #25	CBX1 (ENSBGRG00000021062) #26	NFE2L1 (ENSBGRG00000020783) #27	COPZ2 (ENSBGRG00000020574) #28	CDK5RAP3 (ENSBGRG00000020283) #29	ENSBGRG00000020194 #30	PNPO (ENSBGRG00000019898) #31	ENSBGRG00000019774 #32	SP6 (ENSBGRG00000019744) #33	SCRN2 (ENSBGRG00000019672) #34	LRRC46 (ENSBGRG00000019490) #35	MRPL10 (ENSBGRG00000019422) #36	OSBPL7 (ENSBGRG00000019260) #37
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00950000185410	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Carnivora	ANCESTRAL SPECIES	9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00950000185410	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Caniformia	ANCESTRAL SPECIES	6	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00950000185410	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Canidae	ANCESTRAL SPECIES	2	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.c	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.c	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Dog	MODERN SPECIES	37	IGF2BP1 (ENSCAFG00845010596) #9	GIP (ENSCAFG00845010532) #10	SNF8 (ENSCAFG00845010455) #11	UBE2Z (ENSCAFG00845010395) #12	ATP5MC1 (ENSCAFG00845010336)	CALCOCO2 (ENSCAFG00845010119) #14	TTLL6 (ENSCAFG00845010017) #15	HOXB13 (ENSCAFG00845009992) #16	HOXB9 (ENSCAFG00845009956) #17	HOXB8 (ENSCAFG00845009931)	HOXB7 (ENSCAFG00845009899)	HOXB6 (ENSCAFG00845009871) #18	HOXB5 (ENSCAFG00845009832) #19	HOXB4 (ENSCAFG00845017264)	HOXB3 (ENSCAFG00845017188) #21	HOXB2 (ENSCAFG00845017142) #22	HOXB1 (ENSCAFG00845017096) #23	SKAP1 (ENSCAFG00845016959) #24	SNX11 (ENSCAFG00845016720) #25	CBX1 (ENSCAFG00845016596) #26	NFE2L1 (ENSCAFG00845016388) #27	COPZ2 (ENSCAFG00845016156) #28	CDK5RAP3 (ENSCAFG00845016051) #29	ENSCAFG00845016000	PRR15L (ENSCAFG00845015978) #30	PNPO (ENSCAFG00845015876) #31	SP2 (ENSCAFG00845015786) #32	SP6 (ENSCAFG00845015746) #33	SCRN2 (ENSCAFG00845015686) #34	LRRC46 (ENSCAFG00845015603) #35	MRPL10 (ENSCAFG00845015539) #36
Dingo	MODERN SPECIES	150	IGF2BP1 (ENSCAFG00020023369) #9	GIP (ENSCAFG00020023360) #10	SNF8 (ENSCAFG00020023354) #11	UBE2Z (ENSCAFG00020023351) #12	ENSCAFG00020023349	CALCOCO2 (ENSCAFG00020023334) #14	TTLL6 (ENSCAFG00020023324) #15	HOXB13 (ENSCAFG00020023319) #16	HOXB9 (ENSCAFG00020023312) #17	HOXB8 (ENSCAFG00020023306)	ENSCAFG00020023303	HOXB6 (ENSCAFG00020023302) #18	HOXB5 (ENSCAFG00020023301) #19	HOXB4 (ENSCAFG00020023297)	HOXB3 (ENSCAFG00020023294) #21	HOXB2 (ENSCAFG00020023293) #22	HOXB1 (ENSCAFG00020023290) #23	SKAP1 (ENSCAFG00020023287) #24	SNX11 (ENSCAFG00020023282) #25	CBX1 (ENSCAFG00020023275) #26	NFE2L1 (ENSCAFG00020023270) #27	COPZ2 (ENSCAFG00020023263) #28	CDK5RAP3 (ENSCAFG00020023258) #29	PRR15L (ENSCAFG00020023256) #30	PNPO (ENSCAFG00020023249) #31	SP2 (ENSCAFG00020023246) #32	SP6 (ENSCAFG00020023243) #33	SCRN2 (ENSCAFG00020023238) #34	LRRC46 (ENSCAFG00020023236) #35	MRPL10 (ENSCAFG00020023232) #36	OSBPL7 (ENSCAFG00020023225) #37
Red fox	MODERN SPECIES	20	IGF2BP1 (ENSVVUG00000003451) #9	GIP (ENSVVUG00000003440) #10	SNF8 (ENSVVUG00000003434) #11	UBE2Z (ENSVVUG00000003424) #12	ATP5MC1 (ENSVVUG00000003411)	CALCOCO2 (ENSVVUG00000003399) #14	TTLL6 (ENSVVUG00000003393) #15	HOXB13 (ENSVVUG00000003382) #16	HOXB9 (ENSVVUG00000003367) #17	HOXB8 (ENSVVUG00000003366)	HOXB7 (ENSVVUG00000003360)	HOXB6 (ENSVVUG00000003359) #18	HOXB5 (ENSVVUG00000003354) #19	ENSVVUG00000003340	HOXB3 (ENSVVUG00000003329) #21	HOXB2 (ENSVVUG00000003328) #22	HOXB1 (ENSVVUG00000003325) #23	SKAP1 (ENSVVUG00000003297) #24	SNX11 (ENSVVUG00000003276) #25	ENSVVUG00000003272 #26	NFE2L1 (ENSVVUG00000003262) #27	COPZ2 (ENSVVUG00000003249) #28	CDK5RAP3 (ENSVVUG00000003227) #29	PRR15L (ENSVVUG00000003218) #30	PNPO (ENSVVUG00000003178) #31	SP2 (ENSVVUG00000003171) #32	SP6 (ENSVVUG00000003167) #33	SCRN2 (ENSVVUG00000003154) #34	LRRC46 (ENSVVUG00000003146) #35	MRPL10 (ENSVVUG00000003141) #36	ENSVVUG00000003127 #37
Caniformia_b	ANCESTRAL SPECIES	21	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00950000185410	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Mustelinae	ANCESTRAL SPECIES	2	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00950000185410	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
American mink	MODERN SPECIES	92	GIP (ENSNVIG00000006361) #10	ENSNVIG00000006352 #11	ENSNVIG00000006339	UBE2Z (ENSNVIG00000006316) #12	ENSNVIG00000006295	CALCOCO2 (ENSNVIG00000006167) #14	TTLL6 (ENSNVIG00000006132) #15	HOXB13 (ENSNVIG00000006117) #16	HOXB9 (ENSNVIG00000006082) #17	HOXB8 (ENSNVIG00000006066)	HOXB7 (ENSNVIG00000006060)	HOXB6 (ENSNVIG00000006053) #18	HOXB5 (ENSNVIG00000006049) #19	HOXB4 (ENSNVIG00000006040)	HOXB3 (ENSNVIG00000006032) #21	HOXB2 (ENSNVIG00000006024) #22	HOXB1 (ENSNVIG00000006017) #23	ENSNVIG00000006009	SKAP1 (ENSNVIG00000005974) #24	SNX11 (ENSNVIG00000005959) #25	CBX1 (ENSNVIG00000005946) #26	NFE2L1 (ENSNVIG00000005857) #27	ENSNVIG00000005842	COPZ2 (ENSNVIG00000005837) #28	CDK5RAP3 (ENSNVIG00000005742) #29	PR15L (ENSNVIG00000005731) #30	PNPO (ENSNVIG00000005692) #31	SP2 (ENSNVIG00000005673) #32	SP6 (ENSNVIG00000005667) #33	SCRN2 (ENSNVIG00000005641) #34	LRRC46 (ENSNVIG00000005619) #35
Ferret	MODERN SPECIES	270	B4GALNT2 (ENSMPUG00000015373) #8	IGF2BP1 (ENSMPUG00000015358) #9	GIP (ENSMPUG00000015357) #10	SNF8 (ENSMPUG00000015356) #11	UBE2Z (ENSMPUG00000015342) #12	ENSMPUG00000015341	CALCOCO2 (ENSMPUG00000015338) #14	TTLL6 (ENSMPUG00000015335) #15	HOXB13 (ENSMPUG00000015332) #16	HOXB9 (ENSMPUG00000015330) #17	HOXB8 (ENSMPUG00000015329)	HOXB7 (ENSMPUG00000015328)	HOXB6 (ENSMPUG00000015322) #18	HOXB5 (ENSMPUG00000015316) #19	HOXB4 (ENSMPUG00000015310)	HOXB2 (ENSMPUG00000015309) #22	HOXB1 (ENSMPUG00000015307) #23	SKAP1 (ENSMPUG00000015305) #24	SNX11 (ENSMPUG00000015303) #25	CBX1 (ENSMPUG00000015302) ##26	NFE2L1 (ENSMPUG00000015301) #27	COPZ2 (ENSMPUG00000015292) #28	CDK5RAP3 (ENSMPUG00000015291) #29	PRR15L (ENSMPUG00000020087) #30	PNPO (ENSMPUG00000015290) #31	SP2 (ENSMPUG00000015289) #32	SP6 (ENSMPUG00000020086) #33	SCRN2 (ENSMPUG00000015288) #34	LRRC46 (ENSMPUG00000015287) #35	MRPL10 (ENSMPUG00000015278) #36	OSBPL7 (ENSMPUG00000015276) #37
Ursidae	ANCESTRAL SPECIES	18	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00950000185410	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Ursus	ANCESTRAL SPECIES	67	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00950000185410	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
American black bear	MODERN SPECIES	4290															HOXB3 (ENSUAMG00000008864) #21	HOXB2 (ENSUAMG00000008866) #22	HOXB1 (ENSUAMG00000008868) #23
Giant Panda	MODERN SPECIES	4	GIP (ENSAMEG00000005081) #10	SNF8 (ENSAMEG00000005062) #11	UBE2Z (ENSAMEG00000005049) #12	ATP5MC1 (ENSAMEG00000005038)	CALCOCO2 (ENSAMEG00000005015) #14	ENSAMEG00000005000 #15	HOXB13 (ENSAMEG00000026873) #16	ENSAMEG00000026258	HOXB9 (ENSAMEG00000024921) #17	ENSAMEG00000004982	HOXB7 (ENSAMEG00000004977)	HOXB6 (ENSAMEG00000004971) #18	HOXB5 (ENSAMEG00000004967) #19	HOXB4 (ENSAMEG00000028329)	HOXB3 (ENSAMEG00000027375) #21	HOXB2 (ENSAMEG00000030987) #22	HOXB1 (ENSAMEG00000004935) #23	SKAP1 (ENSAMEG00000004919) #24	SNX11 (ENSAMEG00000004898) #25	CBX1 (ENSAMEG00000004890) #26	NFE2L1 (ENSAMEG00000004881) #27	COPZ2 (ENSAMEG00000004850) #28	ENSAMEG00000030152	CDK5RAP3 (ENSAMEG00000004818) #29	PRR15L (ENSAMEG00000025744) #30	PNPO (ENSAMEG00000004786) #31	SP2 (ENSAMEG00000004772) #32	SCRN2 (ENSAMEG00000004751) #34	LRRC46 (ENSAMEG00000004734) #35	MRPL10 (ENSAMEG00000004722) #36	OSBPL7 (ENSAMEG00000004670) #37
Felidae	ANCESTRAL SPECIES	8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.f.a	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000013771.p	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00950000185410	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35
Panthera	ANCESTRAL SPECIES	14	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.f.a	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000013771.p	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00950000185410	ENSGT00390000004405.b #28	ENSGT00940000154534.a #30	ENSGT00390000000713 #29	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35
Tiger	MODERN SPECIES	230	ZNF652 (ENSPTIG00000010615)	ABI3 (ENSPTIG00000011177)	GNGT2 (ENSPTIG00000011802) #7	B4GALNT2 (ENSPTIG00000012803) #8	IGF2BP1 (ENSPTIG00000013291) #9	GIP (ENSPTIG00000016604) #10	SNF8 (ENSPTIG00000017017) #11	UBE2Z (ENSPTIG00000017872) #12	ENSPTIG00000018508	CALCOCO2 (ENSPTIG00000020855) #14	TTLL6 (ENSPTIG00000010570) #15	ENSPTIG00000013326 #16	HOXB7 (ENSPTIG00000014471)	HOXB5 (ENSPTIG00000014877) #19	HOXB4 (ENSPTIG00000014995)	HOXB2 (ENSPTIG00000015306) #22	HOXB1 (ENSPTIG00000015694) #23	SKAP1 (ENSPTIG00000016493) #24	SNX11 (ENSPTIG00000018316) #25	CBX1 (ENSPTIG00000020896) ##26	NFE2L1 (ENSPTIG00000021715) #27	ENSPTIG00000007047	COPZ2 (ENSPTIG00000007508) #28	CDK5RAP3 (ENSPTIG00000009086) #29	PNPO (ENSPTIG00000012157) #31	SP2 (ENSPTIG00000014873) #32	SCRN2 (ENSPTIG00000016232) #34	LRRC46 (ENSPTIG00000018466) #35	MRPL10 (ENSPTIG00000018968) #36	ENSPTIG00000019388 #37	TBX21 (ENSPTIG00000001553)
Panthera_a	ANCESTRAL SPECIES	13	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.f.a	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000013771.p	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00940000154534.a #30	ENSGT00390000000713 #29	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
leopard	MODERN SPECIES	67	IGF2BP1 (ENSPPRG00000008067) #9	GIP (ENSPPRG00000007119) #10	ENSPPRG00000007008 #11	UBE2Z (ENSPPRG00000005626) #12	ENSPPRG00000005588	CALCOCO2 (ENSPPRG00000004550) #14	TTLL6 (ENSPPRG00000003004) #15	HOXB13 (ENSPPRG00000001633) #16	HOXB9 (ENSPPRG00000001578) #17	HOXB8 (ENSPPRG00000001156)	HOXB7 (ENSPPRG00000000666)	HOXB6 (ENSPPRG00000000532) #18	HOXB5 (ENSPPRG00000000333) #19	HOXB4 (ENSPPRG00000000220)	HOXB3 (ENSPPRG00000022415) #21	HOXB2 (ENSPPRG00000020926) #22	HOXB1 (ENSPPRG00000017656) #23	ENSPPRG00000017115	ENSPPRG00000016613	SKAP1 (ENSPPRG00000015336) #24	SNX11 (ENSPPRG00000012061) #25	CBX1 (ENSPPRG00000009475) #26	NFE2L1 (ENSPPRG00000009101) #27	COPZ2 (ENSPPRG00000006801) #28	CDK5RAP3 (ENSPPRG00000006376) #29	PNPO (ENSPPRG00000005037) #31	SP2 (ENSPPRG00000003332) #32	SP6 (ENSPPRG00000016089) #33	SCRN2 (ENSPPRG00000002730) #34	LRRC46 (ENSPPRG00000001915) #35	MRPL10 (ENSPPRG00000001188) #36
lion	MODERN SPECIES	14	GIP (ENSPLOG00000021311) #10	SNF8 (ENSPLOG00000021370) #11	UBE2Z (ENSPLOG00000021399) #12	ENSPLOG00000021422	CALCOCO2 (ENSPLOG00000021469) #14	TTLL6 (ENSPLOG00000021506) #15	HOXB13 (ENSPLOG00000021590) #16	ENSPLOG00000021606	HOXB9 (ENSPLOG00000021630) #17	HOXB8 (ENSPLOG00000021645)	HOXB7 (ENSPLOG00000021659)	HOXB6 (ENSPLOG00000021669) #18	HOXB5 (ENSPLOG00000021683) #19	HOXB4 (ENSPLOG00000021697)	HOXB3 (ENSPLOG00000021711) #21	HOXB2 (ENSPLOG00000021733) #22	HOXB1 (ENSPLOG00000021742) #23	ENSPLOG00000021761	SKAP1 (ENSPLOG00000021790) #24	SNX11 (ENSPLOG00000021872) #25	CBX1 (ENSPLOG00000021907) #26	NFE2L1 (ENSPLOG00000021931) #27	COPZ2 (ENSPLOG00000021972) #28	CDK5RAP3 (ENSPLOG00000022033) #29	PRR15L (ENSPLOG00000022093) #30	SP2 (ENSPLOG00000022101) #32	SP6 (ENSPLOG00000022115) #33	SCRN2 (ENSPLOG00000022130) #34	LRRC46 (ENSPLOG00000005433) #35	MRPL10 (ENSPLOG00000005459) #36	OSBPL7 (ENSPLOG00000005563) #37
Cat	MODERN SPECIES	245	IGF2BP1 (ENSFCAG00000002454) #9	GIP (ENSFCAG00000008946) #10	SNF8 (ENSFCAG00000008944) #11	UBE2Z (ENSFCAG00000045462) #12	ENSFCAG00000002344	CALCOCO2 (ENSFCAG00000010622) #14	TTLL6 (ENSFCAG00000010617) #15	HOXB13 (ENSFCAG00000002120) #16	HOXB9 (ENSFCAG00000035234) #17	HOXB8 (ENSFCAG00000036979)	HOXB7 (ENSFCAG00000002118)	HOXB6 (ENSFCAG00000034768) #18	HOXB5 (ENSFCAG00000039068) #19	HOXB4 (ENSFCAG00000051422)	HOXB3 (ENSFCAG00000006408) #21	HOXB2 (ENSFCAG00000045039) #22	HOXB1 (ENSFCAG00000028151) #23	ENSFCAG00000034133	SKAP1 (ENSFCAG00000004784) #24	SNX11 (ENSFCAG00000009371) #25	CBX1 (ENSFCAG00000006056) ##26	NFE2L1 (ENSFCAG00000009369) #27	COPZ2 (ENSFCAG00000034233) #28	CDK5RAP3 (ENSFCAG00000009367) #29	PRR15L (ENSFCAG00000009366) #30	PNPO (ENSFCAG00000001300) #31	SP2 (ENSFCAG00000009365) #32	SP6 (ENSFCAG00000009363) #33	SCRN2 (ENSFCAG00000009362) #34	LRRC46 (ENSFCAG00000045119) #35	MRPL10 (ENSFCAG00000009360) #36
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Microchiroptera	ANCESTRAL SPECIES		ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Greater horseshoe bat	MODERN SPECIES	13	SNF8 (ENSRFEG00010021745) #11	UBE2Z (ENSRFEG00010021755) #12	ENSRFEG00010021766	CALCOCO2 (ENSRFEG00010021784) #14	ENSRFEG00010021798	TTLL6 (ENSRFEG00010021801) #15	HOXB13 (ENSRFEG00010021808) #16	HOXB9 (ENSRFEG00010021814) #17	HOXB8 (ENSRFEG00010021818)	HOXB7 (ENSRFEG00010021823)	HOXB6 (ENSRFEG00010021831) #18	HOXB5 (ENSRFEG00010021836) #19	HOXB4 (ENSRFEG00010021844)	ENSRFEG00010021849	HOXB3 (ENSRFEG00010021853) #21	HOXB2 (ENSRFEG00010021859) #22	HOXB1 (ENSRFEG00010021864) #23	SKAP1 (ENSRFEG00010021866) #24	SNX11 (ENSRFEG00010021879) #25	CBX1 (ENSRFEG00010021893) #26	NFE2L1 (ENSRFEG00010021900) #27	COPZ2 (ENSRFEG00010021918) #28	CDK5RAP3 (ENSRFEG00010021928) #29	PRR15L (ENSRFEG00010021936) #30	PNPO (ENSRFEG00010021942) #31	SP2 (ENSRFEG00010021950) #32	SP6 (ENSRFEG00010021957) #33	SCRN2 (ENSRFEG00010021961) #34	LRRC46 (ENSRFEG00010008197) #35	MRPL10 (ENSRFEG00010008230) #36	OSBPL7 (ENSRFEG00010008272) #37
Microbat	MODERN SPECIES	2739																ENSMLUG00000008433 #22
Megabat	MODERN SPECIES	334							HOXB13 (ENSPVAG00000015531) #16	ENSPVAG00000015530	HOXB8 (ENSPVAG00000015529)	HOXB7 (ENSPVAG00000015528)	ENSPVAG00000015526	HOXB6 (ENSPVAG00000015525) #18	HOXB5 (ENSPVAG00000015524) #19	HOXB4 (ENSPVAG00000015523)	HOXB3 (ENSPVAG00000015522) #21	ENSPVAG00000015521 #22	HOXB1 (ENSPVAG00000015520) #23	SKAP1 (ENSPVAG00000015519) #24	SNX11 (ENSPVAG00000015518) #25
Equus	ANCESTRAL SPECIES		ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Donkey	MODERN SPECIES	4	SNF8 (ENSEASG00005000402) #11	ENSEASG00005030756	UBE2Z (ENSEASG00005000404) #12	ENSEASG00005032484	ENSEASG00005026420 #14	CALCOCO2 (ENSEASG00005000430) #14	ENSEASG00005037375 #15	ENSEASG00005000438 #15	HOXB13 (ENSEASG00005025083) #16	HOXB9 (ENSEASG00005000527) #17	HOXB8 (ENSEASG00005024978)	HOXB7 (ENSEASG00005000556)	HOXB5 (ENSEASG00005000563) #19	HOXB6 (ENSEASG00005000560) #18	HOXB3 (ENSEASG00005000581) #21	HOXB2 (ENSEASG00005000585) #22	HOXB1 (ENSEASG00005000594) #23	SKAP1 (ENSEASG00005000601) #24	SNX11 (ENSEASG00005000605) #25	CBX1 (ENSEASG00005000607) #26	NFE2L1 (ENSEASG00005000634) #27	COPZ2 (ENSEASG00005000641) #28	CDK5RAP3 (ENSEASG00005000658) #29	PRR15L (ENSEASG00005000660) #30	PNPO (ENSEASG00005028794) #31	SP2 (ENSEASG00005000667) #32	SP6 (ENSEASG00005036407) #33	SCRN2 (ENSEASG00005000671) #34	LRRC46 (ENSEASG00005000676) #35	MRPL10 (ENSEASG00005027403) #36	OSBPL7 (ENSEASG00005000733) #37
Horse	MODERN SPECIES	2	IGF2BP1 (ENSECAG00000009723) #9	GIP (ENSECAG00000008172) #10	ENSECAG00000046431	SNF8 (ENSECAG00000022092) #11	UBE2Z (ENSECAG00000021160) #12	ATP5MC1 (ENSECAG00000019908)	CALCOCO2 (ENSECAG00000015498) #14	ENSECAG00000059603 #15	TTLL6 (ENSECAG00000014417) #15	HOXB13 (ENSECAG00000013619) #16	HOXB9 (ENSECAG00000036001) #17	HOXB8 (ENSECAG00000034473)	HOXB5 (ENSECAG00000012439) #19	HOXB4 (ENSECAG00000028576)	HOXB3 (ENSECAG00000002707) #21	HOXB2 (ENSECAG00000012423) #22	HOXB1 (ENSECAG00000011628) #23	SKAP1 (ENSECAG00000010544) #24	SNX11 (ENSECAG00000008117) #25	CBX1 (ENSECAG00000008048) #26	NFE2L1 (ENSECAG00000007777) #27	COPZ2 (ENSECAG00000024471) #28	CDK5RAP3 (ENSECAG00000018688) #29	PRR15L (ENSECAG00000002658) #30	PNPO (ENSECAG00000014995) #31	SP2 (ENSECAG00000012859) #32	SP6 (ENSECAG00000012853) #33	SCRN2 (ENSECAG00000009826) #34	LRRC46 (ENSECAG00000007543) #35	OSBPL7 (ENSECAG00000019067) #37	TBX21 (ENSECAG00000018160)
Atlantogenata	ANCESTRAL SPECIES	1	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Afrotheria	ANCESTRAL SPECIES	2	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Afrotheria_a	ANCESTRAL SPECIES	2	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439 #37
Elephant	MODERN SPECIES	310	UBE2Z (ENSLAFG00000006606) #12	ATP5MC1 (ENSLAFG00000004537) #13	CALCOCO2 (ENSLAFG00000016693) #14	ENSLAFG00000027009	TTLL6 (ENSLAFG00000003368) #15	ENSLAFG00000026602	HOXB13 (ENSLAFG00000011262) #16	HOXB9 (ENSLAFG00000013600) #17	HOXB8 (ENSLAFG00000030682)	HOXB7 (ENSLAFG00000030637)	HOXB6 (ENSLAFG00000013593) #18	HOXB5 (ENSLAFG00000013590) #19	HOXB4 (ENSLAFG00000013588)	HOXB3 (ENSLAFG00000030335) #21	ENSLAFG00000030505	HOXB2 (ENSLAFG00000030161) #22	ENSLAFG00000031610 #23	SKAP1 (ENSLAFG00000018530) #24	SNX11 (ENSLAFG00000018529) #25	CBX1 (ENSLAFG00000018526) #26	NFE2L1 (ENSLAFG00000018523) #27	ENSLAFG00000015209 #28	ENSLAFG00000030284	CDK5RAP3 (ENSLAFG00000000339) #29	PRR15L (ENSLAFG00000015553) #30	PNPO (ENSLAFG00000015550) #31	SP2 (ENSLAFG00000021817) #32	SP6 (ENSLAFG00000010701) #33	SCRN2 (ENSLAFG00000025964) #34	LRRC46 (ENSLAFG00000006826) #35	MRPL10 (ENSLAFG00000028127) #36
Hyrax	MODERN SPECIES	9097															HOXB3 (ENSPCAG00000007683) #21	HOXB2 (ENSPCAG00000007667) #22
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000155029.c.b #22
Armadillo	MODERN SPECIES	231																ENSDNOG00000047374 #22
Marsupialia	ANCESTRAL SPECIES	13	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Marsupialia_b	ANCESTRAL SPECIES	16	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Diprotodontia	ANCESTRAL SPECIES	9	ENSGT00390000006679.b.b #8	ENSGT00940000160427 #9	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Wallaby	MODERN SPECIES	12825																HOXB2 (ENSMEUG00000003516) #22	HOXB1 (ENSMEUG00000003514) #23
Diprotodontia_a	ANCESTRAL SPECIES	11	ENSGT00390000006679.b.b #8	ENSGT00940000160427 #9	ENSGT00390000007843 #11	ENSGT00940000159091.e #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
koala	MODERN SPECIES	67	GNGT2 (ENSPCIG00000013109) #7	B4GALNT2 (ENSPCIG00000003606) #8	IGF2BP1 (ENSPCIG00000013111) #9	SNF8 (ENSPCIG00000013302) #11	ENSPCIG00000013305 #12	ATP5MC1 (ENSPCIG00000013306) #13	CALCOCO2 (ENSPCIG00000010432) #14	TTLL6 (ENSPCIG00000030247) #15	HOXB13 (ENSPCIG00000030249) #16	HOXB9 (ENSPCIG00000030251) #17	HOXB7 (ENSPCIG00000000064)	HOXB6 (ENSPCIG00000000076) #18	HOXB5 (ENSPCIG00000031080) #19	HOXB4 (ENSPCIG00000000195)	HOXB3 (ENSPCIG00000000217) #21	HOXB2 (ENSPCIG00000000295) #22	HOXB1 (ENSPCIG00000033449) #23	SKAP1 (ENSPCIG00000000339) #24	SNX11 (ENSPCIG00000000612) #25	CBX1 (ENSPCIG00000000630) #26	NFE2L1 (ENSPCIG00000000720) #27	COPZ2 (ENSPCIG00000000757) #28	CDK5RAP3 (ENSPCIG00000000798) #29	PRR15L (ENSPCIG00000000814) #30	PNPO (ENSPCIG00000000828) #31	ENSPCIG00000000834	SP2 (ENSPCIG00000000843) #32	SP6 (ENSPCIG00000000873) #33	SCRN2 (ENSPCIG00000000883) #34	LRRC46 (ENSPCIG00000000900) #35	MRPL10 (ENSPCIG00000031062) #36
Common wonbat	MODERN SPECIES	1037	ABI3 (ENSVURG00010007788)	GNGT2 (ENSVURG00010007781) #7	B4GALNT2 (ENSVURG00010007761) #8	IGF2BP1 (ENSVURG00010007702) #9	SNF8 (ENSVURG00010007691) #11	ENSVURG00010007663 #12	CALCOCO2 (ENSVURG00010007642) #14	HOXB13 (ENSVURG00010007629) #16	HOXB9 (ENSVURG00010007619) #17	HOXB8 (ENSVURG00010007609)	HOXB7 (ENSVURG00010007606)	HOXB6 (ENSVURG00010007602) #18	HOXB5 (ENSVURG00010007599) #19	HOXB4 (ENSVURG00010007589)	HOXB3 (ENSVURG00010007587) #21	HOXB2 (ENSVURG00010007579) #22	HOXB1 (ENSVURG00010007572) #23	SKAP1 (ENSVURG00010007559) #24	SNX11 (ENSVURG00010007541) #25	CBX1 (ENSVURG00010007537) #26	NFE2L1 (ENSVURG00010007465) #27	COPZ2 (ENSVURG00010007430) #28	CDK5RAP3 (ENSVURG00010007403) #29	PRR15L (ENSVURG00010007394) #30	PNPO (ENSVURG00010007376) #31	ENSVURG00010007365	SP2 (ENSVURG00010007347) #32	SP6 (ENSVURG00010007336) #33	SCRN2 (ENSVURG00010007326) #34	LRRC46 (ENSVURG00010007320) #35	MRPL10 (ENSVURG00010007313) #36
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000014937 #8	ENSSHAG00000014639 #8	IGF2BP1 (ENSSHAG00000014259) #9	ENSSHAG00000014119 #10	SNF8 (ENSSHAG00000013985) #11	UBE2Z (ENSSHAG00000020994) #12	ATP5MC1 (ENSSHAG00000013859) #13	CALCOCO2 (ENSSHAG00000022264) #14	TTLL6 (ENSSHAG00000013396) #15	HOXB13 (ENSSHAG00000013189) #16	HOXB9 (ENSSHAG00000012684) #17	HOXB8 (ENSSHAG00000023021)	HOXB7 (ENSSHAG00000022783)	HOXB5 (ENSSHAG00000024100) #19	HOXB3 (ENSSHAG00000031207) #21	HOXB2 (ENSSHAG00000012232) #22	HOXB1 (ENSSHAG00000012150) #23	ENSSHAG00000029678	SNX11 (ENSSHAG00000029423) #25	CBX1 (ENSSHAG00000023789) #26	NFE2L1 (ENSSHAG00000026195) #27	COPZ2 (ENSSHAG00000023675) #28	CDK5RAP3 (ENSSHAG00000006548) #29	PRR15L (ENSSHAG00000025985) #30	PNPO (ENSSHAG00000023730) #31	ENSSHAG00000005930	SP2 (ENSSHAG00000005633) #32	SP6 (ENSSHAG00000030597) #33	SCRN2 (ENSSHAG00000003868) #34	LRRC46 (ENSSHAG00000003740) #35	MRPL10 (ENSSHAG00000030224) #36
Opossum	MODERN SPECIES	1	IGF2BP1 (ENSMODG00000012268) #9	ENSMODG00000028269 #10	SNF8 (ENSMODG00000012276) #11	UBE2Z (ENSMODG00000046619) #12	ENSMODG00000012296	ENSMODG00000029509 #14	ENSMODG00000012306 #14	ENSMODG00000025670 #15	HOXB13 (ENSMODG00000012310) #16	HOXB9 (ENSMODG00000012329) #17	HOXB7 (ENSMODG00000044053)	HOXB6 (ENSMODG00000012334) #18	HOXB5 (ENSMODG00000012338) #19	HOXB4 (ENSMODG00000042083)	HOXB3 (ENSMODG00000012344) #21	HOXB2 (ENSMODG00000012347) #22	HOXB1 (ENSMODG00000046816) #23	SKAP1 (ENSMODG00000012360) #24	SNX11 (ENSMODG00000051179) #25	CBX1 (ENSMODG00000012368) #26	NFE2L1 (ENSMODG00000012375) #27	COPZ2 (ENSMODG00000012424) #28	CDK5RAP3 (ENSMODG00000012439) #29	PRR15L (ENSMODG00000024090) #30	PNPO (ENSMODG00000012446) #31	ENSMODG00000050066	SP2 (ENSMODG00000012452) #32	SP6 (ENSMODG00000012454) #33	SCRN2 (ENSMODG00000012467) #34	LRRC46 (ENSMODG00000012473) #35	MRPL10 (ENSMODG00000038269) #36
Platypus	MODERN SPECIES	2	B4GALNT2 (ENSOANG00000042946) #8	IGF2BP1 (ENSOANG00000014859) #9	SNF8 (ENSOANG00000050758) #11	UBE2Z (ENSOANG00000042370) #12	ATP5MC1 (ENSOANG00000049234) #13	ENSOANG00000021387 #14	ENSOANG00000007312 #15	HOXB13 (ENSOANG00000007689) #16	HOXB9 (ENSOANG00000005338) #17	HOXB8 (ENSOANG00000047281)	HOXB7 (ENSOANG00000051269)	HOXB6 (ENSOANG00000050952) #18	HOXB5 (ENSOANG00000051056) #19	HOXB4 (ENSOANG00000042426)	HOXB3 (ENSOANG00000039840) #21	HOXB2 (ENSOANG00000041050) #22	HOXB1 (ENSOANG00000010307) #23	ENSOANG00000044458	SKAP1 (ENSOANG00000010840) #24	ENSOANG00000039817 #25	CBX1 (ENSOANG00000049057) #26	NFE2L1 (ENSOANG00000043783) #27	ENSOANG00000048116 #29	PRR15L (ENSOANG00000013452) #30	PNPO (ENSOANG00000013451) #31	ENSOANG00000049621	SP2 (ENSOANG00000050083) #32	SCRN2 (ENSOANG00000001540) #34	ENSOANG00000001541 #35	MRPL10 (ENSOANG00000006797) #36	OSBPL7 (ENSOANG00000012288) #37
Sauria	ANCESTRAL SPECIES	26	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Lepidosauria	ANCESTRAL SPECIES	23	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.c.a ##26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Episquamata	ANCESTRAL SPECIES	5	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000165938	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.c.a ##26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Toxicofera	ANCESTRAL SPECIES	4	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000165938	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.c.a ##26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00960000192469	ENSGT00390000000603 #36
Elapidae	ANCESTRAL SPECIES	5	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000165938	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230.g	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.c.a ##26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590.b #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00960000192469	ENSGT00390000000603 #36
Elapidae_a	ANCESTRAL SPECIES	19	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000165938	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230.g	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.c.a ##26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590.b #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00960000192469	ENSGT00390000000603 #36
Acanthophiinae	ANCESTRAL SPECIES	19	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT01100000263641.a	ENSGT00960000191601	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529.g	ENSGT00940000161230.g	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.c.a ##26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590.b #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00960000192469	ENSGT00390000000603 #36	ENSGT00940000157439.c #37
Eastern brown snake	MODERN SPECIES	49	IGF2BP1 (ENSPTXG00000013878) #9	SNF8 (ENSPTXG00000013881) #11	UBE2Z (ENSPTXG00000013882) #12	ATP5MC1 (ENSPTXG00000013884) #13	ENSPTXG00000013886 #14	ENSPTXG00000013887	ENSPTXG00000013890	HOXB13 (ENSPTXG00000013892) #16	HOXB9 (ENSPTXG00000013894) #17	ENSPTXG00000013896	ENSPTXG00000013897	HOXB6 (ENSPTXG00000013898) #18	HOXB5 (ENSPTXG00000013900) #19	HOXB4 (ENSPTXG00000013902)	HOXB3 (ENSPTXG00000013904) #21	HOXB2 (ENSPTXG00000013905) #22	HOXB1 (ENSPTXG00000013906) #23	ENSPTXG00000013907	SKAP1 (ENSPTXG00000013908) #24	SNX11 (ENSPTXG00000013909) #25	ENSPTXG00000013911 ##26	NFE2L1 (ENSPTXG00000013912) #27	COPZ2 (ENSPTXG00000013913) #28	CDK5RAP3 (ENSPTXG00000013914) #29	PRR15L (ENSPTXG00000013915) #30	PNPO (ENSPTXG00000013916) #31	ENSPTXG00000013917 #32	SP6 (ENSPTXG00000013918) #33	SCRN2 (ENSPTXG00000013919) #34	ENSPTXG00000013920	MRPL10 (ENSPTXG00000013921) #36
Mainland tiger snake	MODERN SPECIES	29	UBE2Z (ENSNSUG00000007428) #12	ATP5MC1 (ENSNSUG00000007429) #13	ENSNSUG00000007431 #14	ENSNSUG00000007433	ENSNSUG00000007436	ENSNSUG00000007438	ENSNSUG00000007439 #15	HOXB13 (ENSNSUG00000007440) #16	HOXB9 (ENSNSUG00000007441) #17	ENSNSUG00000007442	ENSNSUG00000007443	HOXB6 (ENSNSUG00000007444) #18	HOXB5 (ENSNSUG00000007445) #19	HOXB4 (ENSNSUG00000007447)	HOXB3 (ENSNSUG00000007448) #21	HOXB2 (ENSNSUG00000007449) #22	HOXB1 (ENSNSUG00000007450) #23	SKAP1 (ENSNSUG00000007452) #24	SNX11 (ENSNSUG00000007454) #25	ENSNSUG00000007455 ##26	NFE2L1 (ENSNSUG00000007456) #27	COPZ2 (ENSNSUG00000007459) #28	CDK5RAP3 (ENSNSUG00000007503) #29	PRR15L (ENSNSUG00000007504) #30	PNPO (ENSNSUG00000007506) #31	ENSNSUG00000007509 #32	SP6 (ENSNSUG00000007513) #33	SCRN2 (ENSNSUG00000007517) #34	ENSNSUG00000007519	MRPL10 (ENSNSUG00000007520) #36	OSBPL7 (ENSNSUG00000007592) #37
Blue-lipped sea krait	MODERN SPECIES	9907									HOXB9 (ENSLLTG00000013388) #17	HOXB8 (ENSLLTG00000013376)	HOXB7 (ENSLLTG00000013372)	HOXB6 (ENSLLTG00000013367) #18	HOXB5 (ENSLLTG00000013362) #19	HOXB4 (ENSLLTG00000013356)	HOXB3 (ENSLLTG00000013351) #21	HOXB2 (ENSLLTG00000013346) #22	HOXB1 (ENSLLTG00000013341) #23
Indian cobra	MODERN SPECIES	337	IGF2BP1 (ENSNNAG00000009591) #9	SNF8 (ENSNNAG00000009568) #11	UBE2Z (ENSNNAG00000009539) #12	ATP5MC1 (ENSNNAG00000009523) #13	ENSNNAG00000009498 #14	ENSNNAG00000009486	ENSNNAG00000009471	HOXB13 (ENSNNAG00000009423) #16	HOXB9 (ENSNNAG00000009384) #17	HOXB8 (ENSNNAG00000009361)	HOXB7 (ENSNNAG00000009344)	HOXB6 (ENSNNAG00000009328) #18	HOXB5 (ENSNNAG00000009308) #19	HOXB4 (ENSNNAG00000009277)	HOXB3 (ENSNNAG00000009256) #21	HOXB2 (ENSNNAG00000009232) #22	HOXB1 (ENSNNAG00000009145) #23	SNX11 (ENSNNAG00000009074) #25	ENSNNAG00000009045 ##26	NFE2L1 (ENSNNAG00000009022) #27	COPZ2 (ENSNNAG00000008924) #28	CDK5RAP3 (ENSNNAG00000008878) #29	PRR15L (ENSNNAG00000008859) #30	PNPO (ENSNNAG00000008837) #31	ENSNNAG00000008826 #32	SP6 (ENSNNAG00000008820) #33	SCRN2 (ENSNNAG00000008774) #34	ENSNNAG00000008753	MRPL10 (ENSNNAG00000008730) #36	OSBPL7 (ENSNNAG00000008187) #37	TBX21 (ENSNNAG00000008104)
Lizard	MODERN SPECIES	5	ENSACAG00000006291 #10	SNF8 (ENSACAG00000036858) #11	UBE2Z (ENSACAG00000006311) #12	ENSACAG00000042101	ATP5MC1 (ENSACAG00000035288) #13	ENSACAG00000006352 #14	ENSACAG00000035828	TTLL6 (ENSACAG00000006363) #15	HOXB9 (ENSACAG00000040887) #17	HOXB8 (ENSACAG00000036553)	HOXB7 (ENSACAG00000041279)	HOXB6 (ENSACAG00000034900) #18	HOXB5 (ENSACAG00000042998) #19	HOXB4 (ENSACAG00000006499)	HOXB3 (ENSACAG00000006508) #21	HOXB2 (ENSACAG00000006521) #22	HOXB1 (ENSACAG00000035547) #23	ENSACAG00000041448	ENSACAG00000034966	SKAP1 (ENSACAG00000006534) #24	SNX11 (ENSACAG00000006556) #25	ENSACAG00000006594 ##26	NFE2L1 (ENSACAG00000006615) #27	COPZ2 (ENSACAG00000006651) #28	CDK5RAP3 (ENSACAG00000006686) #29	PRR15L (ENSACAG00000006762) #30	PNPO (ENSACAG00000006764) #31	SP2 (ENSACAG00000006793) #32	SP6 (ENSACAG00000006831) #33	SCRN2 (ENSACAG00000006837) #34	LRRC46 (ENSACAG00000006887) #35
Laterata	ANCESTRAL SPECIES	11	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000165938.a	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.c.a ##26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Common wall lizard	MODERN SPECIES	4	SNF8 (ENSPMRG00000013111) #11	UBE2Z (ENSPMRG00000013116) #12	ENSPMRG00000013122 #13	ENSPMRG00000013127 #14	ENSPMRG00000013134	ENSPMRG00000013136	ENSPMRG00000013141	TTLL6 (ENSPMRG00000013146) #15	HOXB9 (ENSPMRG00000013158) #17	HOXB8 (ENSPMRG00000013160)	HOXB7 (ENSPMRG00000013164)	HOXB6 (ENSPMRG00000013165) #18	HOXB5 (ENSPMRG00000013170) #19	HOXB4 (ENSPMRG00000013173)	HOXB3 (ENSPMRG00000013178) #21	HOXB2 (ENSPMRG00000013183) #22	HOXB1 (ENSPMRG00000013189) #23	ENSPMRG00000013192	CBX1 (ENSPMRG00000013202) ##26	SNX11 (ENSPMRG00000013221) #25	NFE2L1 (ENSPMRG00000013246) #27	ENSPMRG00000013258	COPZ2 (ENSPMRG00000013275) #28	CDK5RAP3 (ENSPMRG00000013294) #29	PNPO (ENSPMRG00000013310) #31	ENSPMRG00000013316	SP2 (ENSPMRG00000013320) #32	SP6 (ENSPMRG00000013329) #33	SCRN2 (ENSPMRG00000013336) #34	LRRC46 (ENSPMRG00000013345) #35	OSBPL7 (ENSPMRG00000013357) #37
Argentine black and white tegu	MODERN SPECIES	32	SNF8 (ENSSMRG00000021827) #11	UBE2Z (ENSSMRG00000021828) #12	ENSSMRG00000021829	CALCOCO2 (ENSSMRG00000021830) #14	ENSSMRG00000021831	ENSSMRG00000021832	ENSSMRG00000021833 #15	HOXB13 (ENSSMRG00000021834) #16	HOXB9 (ENSSMRG00000021835) #17	HOXB8 (ENSSMRG00000021836)	HOXB7 (ENSSMRG00000021837)	HOXB6 (ENSSMRG00000021838) #18	HOXB5 (ENSSMRG00000021839) #19	HOXB4 (ENSSMRG00000021841)	HOXB3 (ENSSMRG00000021842) #21	HOXB2 (ENSSMRG00000021844) #22	HOXB1 (ENSSMRG00000021845) #23	SKAP1 (ENSSMRG00000021847) #24	SNX11 (ENSSMRG00000021848) #25	CBX1 (ENSSMRG00000021849) ##26	NFE2L1 (ENSSMRG00000021850) #27	COPZ2 (ENSSMRG00000021851) #28	CDK5RAP3 (ENSSMRG00000021852) #29	PRR15L (ENSSMRG00000021853) #30	PNPO (ENSSMRG00000021854) #31	ENSSMRG00000021855	SP2 (ENSSMRG00000021856) #32	SP6 (ENSSMRG00000021857) #33	SCRN2 (ENSSMRG00000021858) #34	LRRC46 (ENSSMRG00000000025) #35	MRPL10 (ENSSMRG00000000096) #36
Archelosauria	ANCESTRAL SPECIES	21	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Cryptodira	ANCESTRAL SPECIES	23	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Testudinoidea	ANCESTRAL SPECIES	19	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Emydidae	ANCESTRAL SPECIES	26	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
painted turtle	MODERN SPECIES	2394	IGF2BP1 (ENSCPBG00000027315) #9	GIP (ENSCPBG00000027322) #10	SNF8 (ENSCPBG00000027324) #11	UBE2Z (ENSCPBG00000027326) #12	ATP5MC1 (ENSCPBG00000027327) #13	CALCOCO2 (ENSCPBG00000027328) #14	TTLL6 (ENSCPBG00000027332) #15	HOXB13 (ENSCPBG00000027335) #16	HOXB9 (ENSCPBG00000027339) #17	HOXB8 (ENSCPBG00000027340)	HOXB7 (ENSCPBG00000027341)	HOXB3 (ENSCPBG00000027344) #21	HOXB6 (ENSCPBG00000027348) #18	HOXB5 (ENSCPBG00000027349) #19	ENSCPBG00000027351	HOXB2 (ENSCPBG00000027352) #22	HOXB1 (ENSCPBG00000027354) #23	SKAP1 (ENSCPBG00000027357) #24	SNX11 (ENSCPBG00000027362) #25	CBX1 (ENSCPBG00000027366) #26	NFE2L1 (ENSCPBG00000027369) #27	COPZ2 (ENSCPBG00000027373) #28	CDK5RAP3 (ENSCPBG00000027376) #29	PRR15L (ENSCPBG00000027380) #30	PNPO (ENSCPBG00000027382) #31	ENSCPBG00000027388	SP2 (ENSCPBG00000027391) #32	SP6 (ENSCPBG00000027395) #33	SCRN2 (ENSCPBG00000027397) #34	LRRC46 (ENSCPBG00000027399) #35	MRPL10 (ENSCPBG00000027401) #36
Three-toed box turtle	MODERN SPECIES	91	IGF2BP1 (ENSTMTG00000007859) #9	GIP (ENSTMTG00000007840) #10	SNF8 (ENSTMTG00000007821) #11	UBE2Z (ENSTMTG00000007812) #12	ATP5MC1 (ENSTMTG00000007797) #13	CALCOCO2 (ENSTMTG00000007745) #14	ENSTMTG00000007723 #15	HOXB13 (ENSTMTG00000007711) #16	HOXB9 (ENSTMTG00000007702) #17	HOXB8 (ENSTMTG00000007693)	HOXB7 (ENSTMTG00000007684)	HOXB6 (ENSTMTG00000007672) #18	HOXB5 (ENSTMTG00000007666) #19	HOXB4 (ENSTMTG00000007660)	HOXB3 (ENSTMTG00000007653) #21	HOXB2 (ENSTMTG00000007640) #22	HOXB1 (ENSTMTG00000007622) #23	SKAP1 (ENSTMTG00000007393) #24	SNX11 (ENSTMTG00000007347) #25	CBX1 (ENSTMTG00000007333) #26	NFE2L1 (ENSTMTG00000007320) #27	COPZ2 (ENSTMTG00000007271) #28	CDK5RAP3 (ENSTMTG00000007229) #29	PRR15L (ENSTMTG00000007217) #30	PNPO (ENSTMTG00000007206) #31	ENSTMTG00000007188	SP2 (ENSTMTG00000007171) #32	ENSTMTG00000007161 #33	SCRN2 (ENSTMTG00000007144) #34	ENSTMTG00000007129	MRPL10 (ENSTMTG00000007114) #36
Testudinidae	ANCESTRAL SPECIES	24	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Goode s thornscrub tortoise	MODERN SPECIES	15	IGF2BP1 (ENSGEVG00005018150) #9	ENSGEVG00005018109 #10	SNF8 (ENSGEVG00005018088) #11	UBE2Z (ENSGEVG00005018038) #12	ATP5MC1 (ENSGEVG00005018012) #13	CALCOCO2 (ENSGEVG00005017985) #14	ENSGEVG00005017952 #15	HOXB13 (ENSGEVG00005017930) #16	HOXB9 (ENSGEVG00005017896) #17	HOXB8 (ENSGEVG00005017871)	HOXB7 (ENSGEVG00005017847)	HOXB6 (ENSGEVG00005017822) #18	HOXB5 (ENSGEVG00005017800) #19	HOXB4 (ENSGEVG00005017783)	HOXB3 (ENSGEVG00005017763) #21	HOXB2 (ENSGEVG00005017753) #22	HOXB1 (ENSGEVG00005017735) #23	SKAP1 (ENSGEVG00005017712) #24	SNX11 (ENSGEVG00005017693) #25	CBX1 (ENSGEVG00005017682) #26	NFE2L1 (ENSGEVG00005017658) #27	COPZ2 (ENSGEVG00005017626) #28	CDK5RAP3 (ENSGEVG00005017600) #29	PRR15L (ENSGEVG00005017586) #30	PNPO (ENSGEVG00005017569) #31	ENSGEVG00005017553	SP2 (ENSGEVG00005017526) #32	SCRN2 (ENSGEVG00005017480) #34	LRRC46 (ENSGEVG00005017463) #35	MRPL10 (ENSGEVG00005017446) #36	ENSGEVG00005017409 #37
Abingdon island giant tortoise	MODERN SPECIES	1609	IGF2BP1 (ENSCABG00000002771) #9	GIP (ENSCABG00000002769) #10	SNF8 (ENSCABG00000002767) #11	UBE2Z (ENSCABG00000002765) #12	ATP5MC1 (ENSCABG00000002763) #13	CALCOCO2 (ENSCABG00000002761) #14	TTLL6 (ENSCABG00000002759) #15	HOXB13 (ENSCABG00000002758) #16	HOXB9 (ENSCABG00000002754) #17	HOXB8 (ENSCABG00000002750)	HOXB7 (ENSCABG00000002742)	HOXB6 (ENSCABG00000002738) #18	HOXB5 (ENSCABG00000002737) #19	HOXB4 (ENSCABG00000002736)	HOXB3 (ENSCABG00000002733) #21	HOXB2 (ENSCABG00000002731) #22	HOXB1 (ENSCABG00000002728) #23	SKAP1 (ENSCABG00000002721) #24	SNX11 (ENSCABG00000002717) #25	CBX1 (ENSCABG00000002713) #26	NFE2L1 (ENSCABG00000002708) #27	COPZ2 (ENSCABG00000002681) #28	CDK5RAP3 (ENSCABG00000002680) #29	PRR15L (ENSCABG00000002679) #30	PNPO (ENSCABG00000002678) #31	ENSCABG00000002677	SP2 (ENSCABG00000002675) #32	SP6 (ENSCABG00000002674) #33	SCRN2 (ENSCABG00000002671) #34	ENSCABG00000002668	MRPL10 (ENSCABG00000002666) #36
Archosauria	ANCESTRAL SPECIES	20	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Australian saltwater crocodile	MODERN SPECIES	60	GIP (ENSCPRG00005007298) #10	SNF8 (ENSCPRG00005007296) #11	UBE2Z (ENSCPRG00005007294) #12	ATP5MC1 (ENSCPRG00005007292) #13	ENSCPRG00005007273 #14	TTLL6 (ENSCPRG00005007263) #15	ENSCPRG00005007261	HOXB13 (ENSCPRG00005007259) #16	HOXB9 (ENSCPRG00005007240) #17	HOXB8 (ENSCPRG00005007236)	HOXB7 (ENSCPRG00005007234)	HOXB6 (ENSCPRG00005007226) #18	HOXB5 (ENSCPRG00005007222) #19	HOXB4 (ENSCPRG00005007218)	HOXB3 (ENSCPRG00005007217) #21	HOXB2 (ENSCPRG00005007216) #22	HOXB1 (ENSCPRG00005007211) #23	SKAP1 (ENSCPRG00005007201) #24	SNX11 (ENSCPRG00005007185) #25	CBX1 (ENSCPRG00005007181) #26	NFE2L1 (ENSCPRG00005007178) #27	COPZ2 (ENSCPRG00005007172) #28	CDK5RAP3 (ENSCPRG00005007163) #29	PRR15L (ENSCPRG00005007160) #30	PNPO (ENSCPRG00005007155) #31	ENSCPRG00005007151	SP2 (ENSCPRG00005007150) #32	SP6 (ENSCPRG00005007147) #33	SCRN2 (ENSCPRG00005007138) #34	LRRC46 (ENSCPRG00005007132) #35	MRPL10 (ENSCPRG00005007129) #36
Aves	ANCESTRAL SPECIES	26	ENSGT01100000263525.b.a #7	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
African ostrich	MODERN SPECIES	625		PHB1 (ENSSCUG00000008422)	ZNF652 (ENSSCUG00000008426)	GNGT2 (ENSSCUG00000008427) #7	IGF2BP1 (ENSSCUG00000008429) #9	GIP (ENSSCUG00000008435) #10	SNF8 (ENSSCUG00000008438) #11	UBE2Z (ENSSCUG00000008440) #12	CALCOCO2 (ENSSCUG00000008444) #14	HOXB9 (ENSSCUG00000008450) #17	HOXB8 (ENSSCUG00000008451)	HOXB7 (ENSSCUG00000008454)	HOXB5 (ENSSCUG00000008457) #19	HOXB4 (ENSSCUG00000008461)	HOXB3 (ENSSCUG00000008463) #21	HOXB2 (ENSSCUG00000008465) #22	HOXB1 (ENSSCUG00000008466) #23	SKAP1 (ENSSCUG00000008467) #24	SNX11 (ENSSCUG00000008468) #25	CBX1 (ENSSCUG00000008469) #26	NFE2L1 (ENSSCUG00000008470) #27	ENSSCUG00000008471 #29	ENSSCUG00000008472 #29	PRR15L (ENSSCUG00000008473) #30	PNPO (ENSSCUG00000008474) #31	SP2 (ENSSCUG00000008476) #32
Neognathae	ANCESTRAL SPECIES	23	ENSGT01100000263525.b.a #7	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Neognathae_b	ANCESTRAL SPECIES	23	ENSGT01100000263525.b.a #7	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Neognathae_c	ANCESTRAL SPECIES	26	ENSGT01100000263525.b.a #7	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Golden eagle	MODERN SPECIES	24	GNGT2 (ENSACCG00020006019) #7	IGF2BP1 (ENSACCG00020006001) #9	GIP (ENSACCG00020005975) #10	SNF8 (ENSACCG00020005957) #11	UBE2Z (ENSACCG00020005940) #12	ENSACCG00020005924	CALCOCO2 (ENSACCG00020005903) #14	HOXB13 (ENSACCG00020005876) #16	HOXB9 (ENSACCG00020005856) #17	HOXB8 (ENSACCG00020005840)	HOXB7 (ENSACCG00020005829)	HOXB6 (ENSACCG00020005822) #18	HOXB5 (ENSACCG00020005810) #19	HOXB4 (ENSACCG00020005789)	HOXB3 (ENSACCG00020005780) #21	HOXB2 (ENSACCG00020005767) #22	HOXB1 (ENSACCG00020005760) #23	ENSACCG00020005744	SKAP1 (ENSACCG00020005684) #24	SNX11 (ENSACCG00020005654) #25	CBX1 (ENSACCG00020005635) #26	NFE2L1 (ENSACCG00020005624) #27	ENSACCG00020005600	CDK5RAP3 (ENSACCG00020005558) #29	PRR15L (ENSACCG00020005531) #30	PNPO (ENSACCG00020005520) #31	ENSACCG00020005504	SP2 (ENSACCG00020005484) #32	SCRN2 (ENSACCG00020005452) #34	LRRC46 (ENSACCG00020005432) #35	MRPL10 (ENSACCG00020005421) #36
Kakapo	MODERN SPECIES	12	GNGT2 (ENSSHBG00005014459) #7	IGF2BP1 (ENSSHBG00005014472) #9	GIP (ENSSHBG00005014482) #10	SNF8 (ENSSHBG00005014495) #11	UBE2Z (ENSSHBG00005014518) #12	ENSSHBG00005014527	ENSSHBG00005014537 #14	HOXB13 (ENSSHBG00005014551) #16	HOXB9 (ENSSHBG00005014566) #17	HOXB8 (ENSSHBG00005014570)	HOXB7 (ENSSHBG00005014576)	HOXB5 (ENSSHBG00005014586) #19	HOXB6 (ENSSHBG00005014592) #18	ENSSHBG00005014606 #20	HOXB3 (ENSSHBG00005014612) #21	HOXB2 (ENSSHBG00005014624) #22	HOXB1 (ENSSHBG00005014632) #23	SKAP1 (ENSSHBG00005014653) #24	ENSSHBG00005014697 #25	CBX1 (ENSSHBG00005014707) #26	NFE2L1 (ENSSHBG00005014718) #27	COPZ2 (ENSSHBG00005014730) #28	JUP (ENSSHBG00005014758)	P3H4 (ENSSHBG00005014770)	FKBP10 (ENSSHBG00005014777)	NT5C3B (ENSSHBG00005014785)	KLHL10 (ENSSHBG00005014792)	KLHL11 (ENSSHBG00005014800)	ACLY (ENSSHBG00005014817)	ODAD4 (ENSSHBG00005014857)	CNP (ENSSHBG00005000727)
Passeriformes	ANCESTRAL SPECIES	29									ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000158988.a.b #20	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000000713 #29	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00940000172406	ENSGT00940000157439 #37	ENSGT00940000160397	ENSGT00940000153704.B
Passeriformes_d	ANCESTRAL SPECIES	25										ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000158988.a.b #20	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000000713 #29	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00940000172406	ENSGT00940000157439 #37	ENSGT00940000160397	ENSGT00940000153704.B
Passeriformes_g	ANCESTRAL SPECIES	50										ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000158988.a.b #20	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000000713 #29	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000172406	ENSGT00940000157439 #37	ENSGT00940000160397	ENSGT00940000153704.B	ENSGT00550000074898
Passeroidea	ANCESTRAL SPECIES	49										ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000158988.a.b #20	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000000713 #29	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000172406	ENSGT00940000157439 #37	ENSGT00940000160397	ENSGT00940000153704.B	ENSGT00550000074898
Zebra finch	MODERN SPECIES	20	PHB1 (ENSTGUG00000003470)	ZNF652 (ENSTGUG00000003462)	PHOSPHO1 (ENSTGUG00000022673)	ABI3 (ENSTGUG00000027023)	IGF2BP1 (ENSTGUG00000016237) #9	ATP5MC1 (ENSTGUG00000026753) #13	UBE2Z (ENSTGUG00000027782) #12	ENSTGUG00000027404	ENSTGUG00000026217	HOXB9 (ENSTGUG00000003448) #17	HOXB8 (ENSTGUG00000003441)	ENSTGUG00000020107	HOXB6 (ENSTGUG00000003435) #18	HOXB5 (ENSTGUG00000003430) #19	ENSTGUG00000021689 #20	HOXB2 (ENSTGUG00000022054) #22	HOXB1 (ENSTGUG00000025694) #23	SKAP1 (ENSTGUG00000029482) #24	ENSTGUG00000026594 #25	NFE2L1 (ENSTGUG00000014715) #27	CDK5RAP3 (ENSTGUG00000016909) #29	PNPO (ENSTGUG00000027633) #31	SP2 (ENSTGUG00000024446) #32	SP6 (ENSTGUG00000027194) #33	SCRN2 (ENSTGUG00000021900) #34	ENSTGUG00000029748	ENSTGUG00000028791 #37	ENSTGUG00000021758 #37	ENSTGUG00000021058	TBKBP1 (ENSTGUG00000026971)	KPNB1 (ENSTGUG00000003387)
Great tit	MODERN SPECIES	283														ENSPMJG00000001410	HOXB3 (ENSPMJG00000001415) #21	HOXB2 (ENSPMJG00000001429) #22	HOXB1 (ENSPMJG00000001436) #23	ENSPMJG00000001437	SKAP1 (ENSPMJG00000001443) #24
Galloanserae	ANCESTRAL SPECIES	23	ENSGT01100000263525.b.a #7	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439.i #37
Anatidae	ANCESTRAL SPECIES	70	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439.i #37
Pink-footed goose	MODERN SPECIES	305	GNGT2 (ENSABRG00000021492) #7	IGF2BP1 (ENSABRG00000000212) #9	GIP (ENSABRG00000000246) #10	SNF8 (ENSABRG00000000286) #11	UBE2Z (ENSABRG00000000335) #12	ATP5MC1 (ENSABRG00000000359) #13	CALCOCO2 (ENSABRG00000000383) #14	HOXB13 (ENSABRG00000000421) #16	HOXB9 (ENSABRG00000000456) #17	HOXB8 (ENSABRG00000000461)	HOXB7 (ENSABRG00000000473)	HOXB6 (ENSABRG00000000480) #18	HOXB5 (ENSABRG00000000485) #19	HOXB4 (ENSABRG00000000495)	HOXB3 (ENSABRG00000000506) #21	HOXB2 (ENSABRG00000000517) #22	HOXB1 (ENSABRG00000000522) #23	SKAP1 (ENSABRG00000000558) #24	SNX11 (ENSABRG00000000576) #25	CBX1 (ENSABRG00000000584) #26	NFE2L1 (ENSABRG00000000594) #27	ENSABRG00000000606 #28	CDK5RAP3 (ENSABRG00000000636) #29	PNPO (ENSABRG00000000676) #31	SP2 (ENSABRG00000001034) #32	SP6 (ENSABRG00000001100) #33	SCRN2 (ENSABRG00000001107) #34	LRRC46 (ENSABRG00000001138) #35	MRPL10 (ENSABRG00000001154) #36	ENSABRG00000001168 #37
Duck	MODERN SPECIES	19	ENSAPLG00000022532	GNGT2 (ENSAPLG00000012604) #7	IGF2BP1 (ENSAPLG00000012620) #9	GIP (ENSAPLG00000013204) #10	SNF8 (ENSAPLG00000031118) #11	ENSAPLG00000013301	ENSAPLG00000013396 #14	HOXB13 (ENSAPLG00000023394) #16	HOXB9 (ENSAPLG00000013604) #17	HOXB8 (ENSAPLG00000013614)	HOXB7 (ENSAPLG00000013643)	HOXB6 (ENSAPLG00000013649) #18	HOXB5 (ENSAPLG00000013657) #19	HOXB4 (ENSAPLG00000013669)	HOXB3 (ENSAPLG00000018688) #21	HOXB2 (ENSAPLG00000022580) #22	HOXB1 (ENSAPLG00000018179) #23	SKAP1 (ENSAPLG00000007983) #24
Phasianidae	ANCESTRAL SPECIES	21	ENSGT01100000263525.b.a #7	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439.i #37	ENSGT00940000160397
Japanese quail	MODERN SPECIES	19	GNGT2 (ENSCJPG00005019355) #7	IGF2BP1 (ENSCJPG00005019356) #9	GIP (ENSCJPG00005019357) #10	SNF8 (ENSCJPG00005019359) #11	UBE2Z (ENSCJPG00005019360) #12	ENSCJPG00005019361	ENSCJPG00005019362 #14	HOXB13 (ENSCJPG00005019363) #16	HOXB9 (ENSCJPG00005019365) #17	HOXB8 (ENSCJPG00005019366)	HOXB7 (ENSCJPG00005019367)	HOXB6 (ENSCJPG00005019368) #18	HOXB5 (ENSCJPG00005019369) #19	HOXB4 (ENSCJPG00005019371)	HOXB3 (ENSCJPG00005019372) #21	HOXB2 (ENSCJPG00005019373) #22	HOXB1 (ENSCJPG00005019374) #23	SKAP1 (ENSCJPG00005019375) #24	SNX11 (ENSCJPG00005019376) #25	CBX1 (ENSCJPG00005019377) #26	NFE2L1 (ENSCJPG00005019378) #27	CDK5RAP3 (ENSCJPG00005019379) #29	PRR15L (ENSCJPG00005019386) #30	SP2 (ENSCJPG00005019387) #32	SP6 (ENSCJPG00005019388) #33	SCRN2 (ENSCJPG00005019389) #34	LRRC46 (ENSCJPG00005019390) #35	MRPL10 (ENSCJPG00005019391) #36	TBX21 (ENSCJPG00005019401)	KPNB1 (ENSCJPG00005000892)	NPEPPS (ENSCJPG00005000955)
Phasianidae_b	ANCESTRAL SPECIES	21	ENSGT01100000263525.b.a #7	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.cb #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152.d #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36	ENSGT00940000157439.i #37	ENSGT00940000160397
Turkey	MODERN SPECIES	21	ENSMGAG00000002455	GNGT2 (ENSMGAG00000022172) #7	IGF2BP1 (ENSMGAG00000002497) #9	ENSMGAG00000007094 #10	SNF8 (ENSMGAG00000007078) #11	UBE2Z (ENSMGAG00000007071) #12	ENSMGAG00000007047 #14	ENSMGAG00000002528	ENSMGAG00000017883 #19	ENSMGAG00000018145 ##27	ENSMGAG00000001269 #27	ENSMGAG00000001238 #26	ENSMGAG00000005549 #25	ENSMGAG00000002604 #24	ENSMGAG00000002567 #23	ENSMGAG00000019576 #22	ENSMGAG00000002541 #21	ENSMGAG00000007152	ENSMGAG00000007146	ENSMGAG00000002914	ENSMGAG00000017567	ENSMGAG00000017244	ENSMGAG00000002870	ENSMGAG00000002864	ENSMGAG00000019329	ENSMGAG00000022574	ENSMGAG00000015993	ENSMGAG00000002822	ENSMGAG00000005490	ENSMGAG00000005512	ENSMGAG00000022275
Chicken	MODERN SPECIES	19	IGF2BP1 (ENSGALG00010024697) #9	GIP (ENSGALG00010026239) #10	SNF8 (ENSGALG00010026298) #11	UBE2Z (ENSGALG00010026856) #12	ATP5MC1 (ENSGALG00010026305) #13	ENSGALG00010026334 #14	HOXB13 (ENSGALG00010026052) #16	HOXB9 (ENSGALG00010026782) #17	ENSGALG00010023374	HOXB8 (ENSGALG00010021446)	HOXB7 (ENSGALG00010023381)	HOXB6 (ENSGALG00010023383) #18	HOXB5 (ENSGALG00010023394) #19	HOXB4 (ENSGALG00010023415)	HOXB3 (ENSGALG00010023428) #21	HOXB2 (ENSGALG00010023438) #22	HOXB1 (ENSGALG00010023454) #23	SKAP1 (ENSGALG00010021479) #24	SNX11 (ENSGALG00010021554) #25	CBX1 (ENSGALG00010021565) #26	NFE2L1 (ENSGALG00010021583) #27	CDK5RAP3 (ENSGALG00010023706) #29	PRR15L (ENSGALG00010023722) #30	PNPO (ENSGALG00010023726) #31	SP2 (ENSGALG00010023730) #32	SP6 (ENSGALG00010023742) #33	SCRN2 (ENSGALG00010023770) #34	LRRC46 (ENSGALG00010023784) #35	MRPL10 (ENSGALG00010023807) #36	OSBPL7 (ENSGALG00010023841) #37	TBX21 (ENSGALG00010023883)
Anura	ANCESTRAL SPECIES	15	ENSGT00940000157106	ENSGT01090000260040.b.a.b	ENSGT00940000158934	ENSGT00940000160902	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00950000183025.a #14	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072	ENSGT00940000159774 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #25	ENSGT00940000154152 #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00390000004405.b #28	ENSGT00390000000713 #29	ENSGT00940000154534.a #30	ENSGT00390000011219 #31	ENSGT00640000092844	ENSGT00940000159590 #32	ENSGT00940000161498 #33	ENSGT00390000013474.b.a #34	ENSGT00940000161315 #35	ENSGT00390000000603 #36
Frog	MODERN SPECIES	1	pabpc1l (ENSXETG00000022831)	ywhab (ENSXETG00000022830)	rims4 (ENSXETG00000044345)	ENSXETG00000034484	kcnk15 (ENSXETG00000038181)	gip (ENSXETG00000031431) #10	snf8 (ENSXETG00000022819) #11	ube2z (ENSXETG00000043685) #12	calcoco2 (ENSXETG00000022806) #14	hoxb9 (ENSXETG00000043711) #17	hoxb8 (ENSXETG00000021993)	hoxb6 (ENSXETG00000021987) #18	hoxb5 (ENSXETG00000021978) #19	hoxb4 (ENSXETG00000021973)	hoxb3 (ENSXETG00000021967) #21	hoxb2 (ENSXETG00000027353) #22	hoxb1 (ENSXETG00000049208) #23	skap1 (ENSXETG00000027357) #24	snx11 (ENSXETG00000038807) #25	cbx1 (ENSXETG00000021962) #26	nfe2l1 (ENSXETG00000021958) #27	copz2 (ENSXETG00000021957) #28	prr15l (ENSXETG00000032726) #30	cdk5rap3 (ENSXETG00000027359) #29	XB5788060 [provisional] (ENSXETG00000027360)	sp2 (ENSXETG00000021952) #32	ENSXETG00000043506	sp6 (ENSXETG00000048156) #33	scrn2 (ENSXETG00000021947) #34	lrrc46 (ENSXETG00000045741) #35	tbx21 (ENSXETG00000041059)
Leishan spiny toad	MODERN SPECIES	3	PABPC1L (ENSLLEG00000024384)	YWHAB (ENSLLEG00000024333)	RIMS4 (ENSLLEG00000024242)	KCNK15 (ENSLLEG00000024208)	ENSLLEG00000024142 #10	SNF8 (ENSLLEG00000023829) #11	UBE2Z (ENSLLEG00000023729) #12	ENSLLEG00000023455 #14	HOXB9 (ENSLLEG00000023395) #17	HOXB8 (ENSLLEG00000023318)	HOXB7 (ENSLLEG00000023272)	HOXB6 (ENSLLEG00000023245) #18	HOXB5 (ENSLLEG00000023222) #19	ENSLLEG00000023190 #20	HOXB3 (ENSLLEG00000023143) #21	HOXB2 (ENSLLEG00000023108) #22	HOXB1 (ENSLLEG00000023048) #23	SKAP1 (ENSLLEG00000022705) #24	SNX11 (ENSLLEG00000022564) #25	CBX1 (ENSLLEG00000022470) #26	NFE2L1 (ENSLLEG00000022364) #27	COPZ2 (ENSLLEG00000022282) #28	CDK5RAP3 (ENSLLEG00000022067) #29	PRR15L (ENSLLEG00000022006) #30	PNPO (ENSLLEG00000021591) #31	ENSLLEG00000021466	SP2 (ENSLLEG00000021414) #32	ENSLLEG00000021350	SP6 (ENSLLEG00000021323) #33	SCRN2 (ENSLLEG00000021262) #34	ENSLLEG00000024888 #36
Coelacanth	MODERN SPECIES	278	igf2bp1 (ENSLACG00000016755)	SNF8 (ENSLACG00000016411) #11	UBE2Z (ENSLACG00000016325) #12	ATP5MC1 (ENSLACG00000016305) #13	ENSLACG00000016150 #14	TTLL6 (ENSLACG00000015912) #15	ENSLACG00000015759	HOXB13 (ENSLACG00000015543) #16	hoxb10a (ENSLACG00000015207)	HOXB9 (ENSLACG00000015129) #17	HOXB8 (ENSLACG00000015099)	HOXB7 (ENSLACG00000015078)	HOXB6 (ENSLACG00000014999) #18	ENSLACG00000014942	HOXB3 (ENSLACG00000014824) #21	HOXB2 (ENSLACG00000014790) #22	HOXB1 (ENSLACG00000014698) #23	SNX11 (ENSLACG00000011068) #25	CBX1 (ENSLACG00000010753) #26	NFE2L1 (ENSLACG00000009960) #27	COPZ2 (ENSLACG00000009416) #28	CDK5RAP3 (ENSLACG00000007698) #29	ENSLACG00000007611	ENSLACG00000007610	PRR15L (ENSLACG00000007448) #30	PNPO (ENSLACG00000007066) #31	SP2 (ENSLACG00000006434) #32	SP6 (ENSLACG00000004875) #33	SCRN2 (ENSLACG00000004181) #34	CHCHD10 (ENSLACG00000001878)	aspdh (ENSLACG00000001117)