Sarcopterygii	ANCESTRAL SPECIES	94		ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152 #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Tetrapoda	ANCESTRAL SPECIES	21		ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152 #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Amniota	ANCESTRAL SPECIES	14	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Mammalia	ANCESTRAL SPECIES	12	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000172404	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315
Theria	ANCESTRAL SPECIES	9	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000172404	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315
Eutheria	ANCESTRAL SPECIES	4	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000159720	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00950000185410	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00950000185410	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Primates	ANCESTRAL SPECIES	3	ENSGT00390000007843	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00950000185410	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00390000007843	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Simiiformes	ANCESTRAL SPECIES	7	ENSGT01100000264599	ENSGT00390000007843.v	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00860000135909	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00390000007843.v	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00860000135909	ENSGT00940000165611 #13	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603.b	ENSGT00940000157439
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00390000007843.u.a	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00860000135909	ENSGT00940000165611 #13	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603.b	ENSGT00940000157439
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00390000007843.u.a	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00860000135909	ENSGT00940000165611 #13	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603.b	ENSGT00940000157439
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00950000183198.c.a.a.b #9	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00860000135909	ENSGT00940000165611 #13	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603.b	ENSGT00940000157439
Macaca	ANCESTRAL SPECIES	4	ENSGT00940000159091	ENSGT00940000154298.a.b.e	ENSGT00950000183025.a #8	ENSGT00950000183198.c.a.a.b #9	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00860000135909	ENSGT00940000165611 #13	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603.b	ENSGT00940000157439
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00390000007843.u.a	ENSGT00940000159091	ENSGT00940000154298.a.b.e	ENSGT00950000183025.a #8	ENSGT00950000183198.c.a.a.b #9	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000165611 #13	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT01100000263493.a.b.b.a.a.b.b.a.a.a.a.a.a.a.d.a.b.b #35	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00940000157439
Crab-eating macaque	MODERN SPECIES	7	ENSMFAG00000055147 #7	CALCOCO2 (ENSMFAG00000000840) #8	ENSMFAG00000030534 #9	ENSMFAG00000059251 #10	TTLL6 (ENSMFAG00000035518) #11	HOXB13 (ENSMFAG00000039799) #12	PRAC1 (ENSMFAG00000039547) #13	ENSMFAG00000047612 #14	HOXB9 (ENSMFAG00000062545) #15	HOXB8 (ENSMFAG00000033418) #16	HOXB7 (ENSMFAG00000039298) #17	HOXB6 (ENSMFAG00000002294) #18	HOXB5 (ENSMFAG00000042418) #19	HOXB4 (ENSMFAG00000041000) #20	ENSMFAG00000062776 #21	HOXB2 (ENSMFAG00000034146) #22	HOXB1 (ENSMFAG00000052359) #23	SKAP1 (ENSMFAG00000038763) #24	ENSMFAG00000048147 #25	ENSMFAG00000047205 #26	SNX11 (ENSMFAG00000001845) #27	CBX1 (ENSMFAG00000036790) #28	NFE2L1 (ENSMFAG00000035583) #29	COPZ2 (ENSMFAG00000045896) #30	CDK5RAP3 (ENSMFAG00000046364) #31	PRR15L (ENSMFAG00000030161) #32	PNPO (ENSMFAG00000039285) #33	SP2 (ENSMFAG00000038712) #34	ENSMFAG00000052999 #35	SP6 (ENSMFAG00000030247) #36	ENSMFAG00000030335 #37
Rhesus	MODERN SPECIES	7	GIP (ENSMMUG00000049405)	SNF8 (ENSMMUG00000021087)	UBE2Z (ENSMMUG00000057164)	ATP5MC1 (ENSMMUG00000013395)	ENSMMUG00000016305 #9	TTLL6 (ENSMMUG00000003436) #11	HOXB13 (ENSMMUG00000060879) #12	PRAC1 (ENSMMUG00000053394) #13	HOXB9 (ENSMMUG00000052505) #15	HOXB8 (ENSMMUG00000020868) #16	HOXB7 (ENSMMUG00000055324) #17	HOXB6 (ENSMMUG00000062283) #18	HOXB5 (ENSMMUG00000051420) #19	ENSMMUG00000045203 #21	HOXB4 (ENSMMUG00000052130) #20	HOXB2 (ENSMMUG00000057001) #22	HOXB1 (ENSMMUG00000022212) #23	SKAP1 (ENSMMUG00000050742) #24	SNX11 (ENSMMUG00000020658) #27	CBX1 (ENSMMUG00000019882) #28	NFE2L1 (ENSMMUG00000021935) #29	COPZ2 (ENSMMUG00000021934) #30	CDK5RAP3 (ENSMMUG00000004760) #31	PRR15L (ENSMMUG00000050551) #32	PNPO (ENSMMUG00000003325) #33	SP2 (ENSMMUG00000004765) #34	ENSMMUG00000053935 #35	SP6 (ENSMMUG00000061952) #36	MRPL10 (ENSMMUG00000021486) #37	LRRC46 (ENSMMUG00000061605)	OSBPL7 (ENSMMUG00000019039)
Pig-tailed macaque	MODERN SPECIES	494	UBE2Z (ENSMNEG00000040572)	ENSMNEG00000011359	ENSMNEG00000027016 #9	CALCOCO2 (ENSMNEG00000041410) #8	TTLL6 (ENSMNEG00000035034) #11	HOXB13 (ENSMNEG00000036275) #12	PRAC2 (ENSMNEG00000038796)	PRAC1 (ENSMNEG00000045191) #13	HOXB9 (ENSMNEG00000045476) #15	HOXB8 (ENSMNEG00000034944) #16	HOXB7 (ENSMNEG00000040001) #17	HOXB6 (ENSMNEG00000042554) #18	HOXB5 (ENSMNEG00000039003) #19	HOXB4 (ENSMNEG00000032435) #20	HOXB3 (ENSMNEG00000032425)	HOXB2 (ENSMNEG00000043416) #22	HOXB1 (ENSMNEG00000036848) #23	ENSMNEG00000033446	SKAP1 (ENSMNEG00000015541) #24	SNX11 (ENSMNEG00000034920) #27	CBX1 (ENSMNEG00000039720) #28	NFE2L1 (ENSMNEG00000037921) #29	COPZ2 (ENSMNEG00000038720) #30	CDK5RAP3 (ENSMNEG00000029039) #31	PRR15L (ENSMNEG00000028174) #32	PNPO (ENSMNEG00000037010) #33	SP2 (ENSMNEG00000029577) #34	SP6 (ENSMNEG00000023861) #36	SCRN2 (ENSMNEG00000031786) #37	LRRC46 (ENSMNEG00000037035)	MRPL10 (ENSMNEG00000030905)
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00390000007843.u.a	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00950000183198.c.a.a.b #9	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000165611 #13	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603.b	ENSGT00940000157439
Olive baboon	MODERN SPECIES	8	SNF8 (ENSPANG00000022831)	UBE2Z (ENSPANG00000022830)	ATP5MC1 (ENSPANG00000022880)	CALCOCO2 (ENSPANG00000022881) #8	ENSPANG00000049214 #9	TTLL6 (ENSPANG00000022885) #11	HOXB13 (ENSPANG00000048407) #12	PRAC1 (ENSPANG00000034268) #13	HOXB9 (ENSPANG00000022896) #15	HOXB8 (ENSPANG00000022895) #16	HOXB7 (ENSPANG00000041701) #17	HOXB6 (ENSPANG00000022891) #18	HOXB5 (ENSPANG00000022889) #19	HOXB4 (ENSPANG00000022888) #20	ENSPANG00000045928 #21	HOXB2 (ENSPANG00000034765) #22	HOXB1 (ENSPANG00000022886) #23	SKAP1 (ENSPANG00000022897) #24	ENSPANG00000026200	SNX11 (ENSPANG00000022898) #27	CBX1 (ENSPANG00000022906) #28	NFE2L1 (ENSPANG00000022904) #29	COPZ2 (ENSPANG00000022903) #30	CDK5RAP3 (ENSPANG00000022902) #31	PNPO (ENSPANG00000022924) #33	SP2 (ENSPANG00000022922) #34	SP6 (ENSPANG00000017158) #36	SCRN2 (ENSPANG00000022920) #37	LRRC46 (ENSPANG00000022918)	MRPL10 (ENSPANG00000022926)	OSBPL7 (ENSPANG00000022928)
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00390000007843.u.a	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00950000183198.c.a.a.b #9	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000165611 #13	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603.b	ENSGT00940000157439
Drill	MODERN SPECIES	1297	GIP (ENSMLEG00000032963)	SNF8 (ENSMLEG00000037501)	UBE2Z (ENSMLEG00000043345)	ATP5MC1 (ENSMLEG00000026746)	CALCOCO2 (ENSMLEG00000034129) #8	TTLL6 (ENSMLEG00000023683) #11	HOXB13 (ENSMLEG00000043860) #12	PRAC1 (ENSMLEG00000033309) #13	HOXB9 (ENSMLEG00000030602) #15	HOXB8 (ENSMLEG00000007179) #16	HOXB7 (ENSMLEG00000042331) #17	HOXB6 (ENSMLEG00000029580) #18	HOXB5 (ENSMLEG00000009970) #19	HOXB3 (ENSMLEG00000026268)	HOXB4 (ENSMLEG00000029897) #20	HOXB2 (ENSMLEG00000031955) #22	HOXB1 (ENSMLEG00000037557) #23	SKAP1 (ENSMLEG00000029308) #24	SNX11 (ENSMLEG00000039008) #27	CBX1 (ENSMLEG00000038745) #28	NFE2L1 (ENSMLEG00000039330) #29	COPZ2 (ENSMLEG00000039090) #30	CDK5RAP3 (ENSMLEG00000033869) #31	PRR15L (ENSMLEG00000020212) #32	PNPO (ENSMLEG00000040872) #33	SP2 (ENSMLEG00000032228) #34	SP6 (ENSMLEG00000027177) #36	SCRN2 (ENSMLEG00000041491) #37	LRRC46 (ENSMLEG00000031583)	MRPL10 (ENSMLEG00000042780)	OSBPL7 (ENSMLEG00000040663)
Sooty mangabey	MODERN SPECIES	564	SNF8 (ENSCATG00000038375)	UBE2Z (ENSCATG00000038755)	ATP5MC1 (ENSCATG00000030174)	CALCOCO2 (ENSCATG00000007708) #8	ENSCATG00000016293 #9	TTLL6 (ENSCATG00000029768) #11	HOXB13 (ENSCATG00000041758) #12	PRAC1 (ENSCATG00000038550) #13	HOXB9 (ENSCATG00000002169) #15	HOXB8 (ENSCATG00000025318) #16	HOXB7 (ENSCATG00000042829) #17	HOXB6 (ENSCATG00000043342) #18	HOXB5 (ENSCATG00000027616) #19	HOXB3 (ENSCATG00000031126)	HOXB4 (ENSCATG00000040704) #20	HOXB2 (ENSCATG00000035238) #22	HOXB1 (ENSCATG00000035575) #23	SKAP1 (ENSCATG00000044458) #24	ENSCATG00000019817	SNX11 (ENSCATG00000030351) #27	ENSCATG00000034735 ##28	NFE2L1 (ENSCATG00000040775) #29	COPZ2 (ENSCATG00000042708) #30	CDK5RAP3 (ENSCATG00000006699) #31	PRR15L (ENSCATG00000020186) #32	PNPO (ENSCATG00000039934) #33	ENSCATG00000003341 #34	SP6 (ENSCATG00000020123) #36	SCRN2 (ENSCATG00000038846) #37	LRRC46 (ENSCATG00000031406)	MRPL10 (ENSCATG00000035686)
Vervet Monkey	MODERN SPECIES	7	IGF2BP1 (ENSCSAG00000002487)	GIP (ENSCSAG00000002491)	SNF8 (ENSCSAG00000002494)	UBE2Z (ENSCSAG00000002496)	ATP5MC1 (ENSCSAG00000002502)	CALCOCO2 (ENSCSAG00000002506) #8	TTLL6 (ENSCSAG00000002511) #11	HOXB13 (ENSCSAG00000002517) #12	HOXB9 (ENSCSAG00000002521) #15	HOXB8 (ENSCSAG00000002523) #16	HOXB7 (ENSCSAG00000002524) #17	HOXB6 (ENSCSAG00000002526) #18	HOXB5 (ENSCSAG00000002529) #19	HOXB4 (ENSCSAG00000002530) #20	HOXB3 (ENSCSAG00000002533)	HOXB2 (ENSCSAG00000002536) #22	HOXB1 (ENSCSAG00000002538) #23	ENSCSAG00000019043	SKAP1 (ENSCSAG00000002542) #24	SNX11 (ENSCSAG00000002545) #27	CBX1 (ENSCSAG00000002547) #28	NFE2L1 (ENSCSAG00000002550) #29	COPZ2 (ENSCSAG00000002558) #30	CDK5RAP3 (ENSCSAG00000002562) #31	PRR15L (ENSCSAG00000019042) #32	PNPO (ENSCSAG00000002565) #33	SP2 (ENSCSAG00000002567) #34	SP6 (ENSCSAG00000019041) #36	SCRN2 (ENSCSAG00000002569) #37	LRRC46 (ENSCSAG00000002574)	MRPL10 (ENSCSAG00000002576)
Rhinopithecus	ANCESTRAL SPECIES	19	ENSGT00390000007843.u.a	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00860000135909	ENSGT00940000165611 #13	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603.b	ENSGT00940000157439
Black snub-nosed monkey	MODERN SPECIES	1661	SNF8 (ENSRBIG00000038039)	UBE2Z (ENSRBIG00000038578)	ATP5MC1 (ENSRBIG00000026711)	CALCOCO2 (ENSRBIG00000035235) #8	TTLL6 (ENSRBIG00000035925) #11	HOXB13 (ENSRBIG00000035598) #12	PRAC2 (ENSRBIG00000032698)	PRAC1 (ENSRBIG00000041996) #13	HOXB9 (ENSRBIG00000035654) #15	HOXB8 (ENSRBIG00000043329) #16	HOXB7 (ENSRBIG00000039896) #17	HOXB6 (ENSRBIG00000029050) #18	HOXB5 (ENSRBIG00000015821) #19	HOXB4 (ENSRBIG00000036141) #20	HOXB3 (ENSRBIG00000036705)	HOXB2 (ENSRBIG00000029105) #22	HOXB1 (ENSRBIG00000041849) #23	SKAP1 (ENSRBIG00000042563) #24	SNX11 (ENSRBIG00000030129) #27	ENSRBIG00000027048 #28	NFE2L1 (ENSRBIG00000034817) #29	COPZ2 (ENSRBIG00000038810) #30	CDK5RAP3 (ENSRBIG00000039441) #31	PRR15L (ENSRBIG00000030176) #32	PNPO (ENSRBIG00000042160) #33	SP2 (ENSRBIG00000032526) #34	ENSRBIG00000039530	TXNDC2 (ENSRBIG00000040108)	ENSRBIG00000040735	OCRL (ENSRBIG00000041702)
Golden snub-nosed monkey	MODERN SPECIES	585	GIP (ENSRROG00000029793)	SNF8 (ENSRROG00000041052)	UBE2Z (ENSRROG00000038314)	ATP5MC1 (ENSRROG00000031127)	CALCOCO2 (ENSRROG00000042598) #8	TTLL6 (ENSRROG00000044208) #11	HOXB13 (ENSRROG00000042147) #12	PRAC2 (ENSRROG00000033208)	PRAC1 (ENSRROG00000039006) #13	HOXB9 (ENSRROG00000044654) #15	HOXB8 (ENSRROG00000045349) #16	HOXB7 (ENSRROG00000035066) #17	HOXB6 (ENSRROG00000028093) #18	HOXB5 (ENSRROG00000030674) #19	HOXB3 (ENSRROG00000037630)	HOXB2 (ENSRROG00000044849) #22	HOXB1 (ENSRROG00000042747) #23	SKAP1 (ENSRROG00000031517) #24	SNX11 (ENSRROG00000029464) #27	CBX1 (ENSRROG00000041227) #28	NFE2L1 (ENSRROG00000044774) #29	COPZ2 (ENSRROG00000030969) #30	CDK5RAP3 (ENSRROG00000044651) #31	PRR15L (ENSRROG00000009484) #32	PNPO (ENSRROG00000044027) #33	SP2 (ENSRROG00000037481) #34	SP6 (ENSRROG00000008983) #36	SCRN2 (ENSRROG00000037252) #37	LRRC46 (ENSRROG00000039559)	MRPL10 (ENSRROG00000033938)	OSBPL7 (ENSRROG00000017659)
Hominoidea	ANCESTRAL SPECIES	13	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00860000135909	ENSGT00940000165611 #13	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713.h.b #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603.b	ENSGT00940000157439
Hominidae	ANCESTRAL SPECIES	16	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00860000135909	ENSGT00940000165611 #13	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713.h.a #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603.b	ENSGT00940000157439
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00860000135909	ENSGT00940000165611 #13	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713.h.a.a.b #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603.b	ENSGT00940000157439
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00860000135909	ENSGT00940000165611 #13	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713.h.a.a.b #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603.b	ENSGT00940000157439
Pan	ANCESTRAL SPECIES	3	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00860000135909	ENSGT00940000165611 #13	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713.h.a.a.b #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603.b	ENSGT00940000157439
Bonobo	MODERN SPECIES	8	SNF8 (ENSPPAG00000030822)	ENSPPAG00000029824	ENSPPAG00000001213	ATP5MC1 (ENSPPAG00000039996)	CALCOCO2 (ENSPPAG00000037813) #8	TTLL6 (ENSPPAG00000036197) #11	HOXB13 (ENSPPAG00000027794) #12	PRAC1 (ENSPPAG00000014004) #13	HOXB9 (ENSPPAG00000028486) #15	HOXB8 (ENSPPAG00000034804) #16	HOXB7 (ENSPPAG00000010963) #17	HOXB6 (ENSPPAG00000032229) #18	HOXB5 (ENSPPAG00000039181) #19	HOXB4 (ENSPPAG00000040659) #20	HOXB3 (ENSPPAG00000032630)	HOXB2 (ENSPPAG00000027417) #22	HOXB1 (ENSPPAG00000039129) #23	SKAP1 (ENSPPAG00000039277) #24	SNX11 (ENSPPAG00000033185) #27	ENSPPAG00000030413 #28	NFE2L1 (ENSPPAG00000031737) #29	COPZ2 (ENSPPAG00000043351) #30	ENSPPAG00000029145 #31	PRR15L (ENSPPAG00000003316) #32	PNPO (ENSPPAG00000038148) #33	SP2 (ENSPPAG00000027065) #34	SP6 (ENSPPAG00000026169) #36	SCRN2 (ENSPPAG00000028214) #37	LRRC46 (ENSPPAG00000038983)	MRPL10 (ENSPPAG00000034452)	OSBPL7 (ENSPPAG00000027887)
Chimpanzee	MODERN SPECIES	8	UBE2Z (ENSPTRG00000009365)	ENSPTRG00000051053	ATP5MC1 (ENSPTRG00000009364)	CALCOCO2 (ENSPTRG00000009363) #8	TTLL6 (ENSPTRG00000009361) #11	HOXB13 (ENSPTRG00000009360) #12	PRAC2 (ENSPTRG00000048455)	PRAC1 (ENSPTRG00000009359) #13	HOXB9 (ENSPTRG00000009358) #15	HOXB8 (ENSPTRG00000048497) #16	HOXB7 (ENSPTRG00000009357) #17	HOXB6 (ENSPTRG00000009356) #18	HOXB5 (ENSPTRG00000009355) #19	HOXB4 (ENSPTRG00000009354) #20	HOXB3 (ENSPTRG00000052423)	HOXB2 (ENSPTRG00000009352) #22	HOXB1 (ENSPTRG00000009351) #23	SKAP1 (ENSPTRG00000009350) #24	SNX11 (ENSPTRG00000009349) #27	CBX1 (ENSPTRG00000052115) #28	NFE2L1 (ENSPTRG00000022631) #29	COPZ2 (ENSPTRG00000009346) #30	CDK5RAP3 (ENSPTRG00000009345) #31	PRR15L (ENSPTRG00000047216) #32	PNPO (ENSPTRG00000009343) #33	SP2 (ENSPTRG00000009342) #34	SP6 (ENSPTRG00000009340) #36	SCRN2 (ENSPTRG00000009339) #37	LRRC46 (ENSPTRG00000009338)	MRPL10 (ENSPTRG00000009337)	OSBPL7 (ENSPTRG00000009336)
Human	MODERN SPECIES	8	SNF8 (ENSG00000159210)	UBE2Z (ENSG00000159202)	ATP5MC1 (ENSG00000159199)	CALCOCO2 (ENSG00000136436) #8	TTLL6 (ENSG00000170703) #11	HOXB13 (ENSG00000159184) #12	PRAC2 (ENSG00000229637)	PRAC1 (ENSG00000159182) #13	HOXB9 (ENSG00000170689) #15	HOXB8 (ENSG00000120068) #16	HOXB7 (ENSG00000260027) #17	HOXB6 (ENSG00000108511) #18	HOXB5 (ENSG00000120075) #19	HOXB4 (ENSG00000182742) #20	HOXB3 (ENSG00000120093)	HOXB2 (ENSG00000173917) #22	HOXB1 (ENSG00000120094) #23	SKAP1 (ENSG00000141293) #24	SNX11 (ENSG00000002919) #27	CBX1 (ENSG00000108468) #28	NFE2L1 (ENSG00000082641) #29	COPZ2 (ENSG00000005243) #30	CDK5RAP3 (ENSG00000108465) #31	PRR15L (ENSG00000167183) #32	PNPO (ENSG00000108439) #33	SP2 (ENSG00000167182) #34	SP6 (ENSG00000189120) #36	SCRN2 (ENSG00000141295) #37	LRRC46 (ENSG00000141294)	MRPL10 (ENSG00000159111)	OSBPL7 (ENSG00000006025)
Gorilla	MODERN SPECIES	18	ENSGGOG00000041818	ENSGGOG00000041027	ATP5MC1 (ENSGGOG00000001626)	ENSGGOG00000040493	CALCOCO2 (ENSGGOG00000005537) #8	TTLL6 (ENSGGOG00000001947) #11	HOXB13 (ENSGGOG00000001945) #12	ENSGGOG00000042122	PRAC1 (ENSGGOG00000027105) #13	ENSGGOG00000036688 #15	HOXB8 (ENSGGOG00000039810) #16	HOXB7 (ENSGGOG00000002637) #17	HOXB6 (ENSGGOG00000002634) #18	HOXB5 (ENSGGOG00000023582) #19	HOXB3 (ENSGGOG00000012838)	HOXB2 (ENSGGOG00000009910) #22	HOXB1 (ENSGGOG00000009904) #23	SKAP1 (ENSGGOG00000012624) #24	ENSGGOG00000025896	CBX1 (ENSGGOG00000024063) #28	NFE2L1 (ENSGGOG00000002268) #29	COPZ2 (ENSGGOG00000002264) #30	ENSGGOG00000022994 #31	PRR15L (ENSGGOG00000037816) #32	PNPO (ENSGGOG00000003786) #33	SP2 (ENSGGOG00000005330) #34	SP6 (ENSGGOG00000036261) #36	SCRN2 (ENSGGOG00000004547) #37	LRRC46 (ENSGGOG00000012667)	MRPL10 (ENSGGOG00000015353)	OSBPL7 (ENSGGOG00000015344)
Orangutan	MODERN SPECIES	8	ENSPPYG00000008911	UBE2Z (ENSPPYG00000032681)	ATP5MC1 (ENSPPYG00000008909)	CALCOCO2 (ENSPPYG00000008907) #8	TTLL6 (ENSPPYG00000008906) #11	HOXB13 (ENSPPYG00000008904) #12	ENSPPYG00000036609	PRAC1 (ENSPPYG00000008903) #13	HOXB9 (ENSPPYG00000008902) #15	HOXB8 (ENSPPYG00000038542) #16	HOXB7 (ENSPPYG00000008901) #17	HOXB6 (ENSPPYG00000008899) #18	HOXB5 (ENSPPYG00000008898) #19	HOXB4 (ENSPPYG00000008897) #20	HOXB3 (ENSPPYG00000008896)	HOXB2 (ENSPPYG00000008895) #22	HOXB1 (ENSPPYG00000008894) #23	SKAP1 (ENSPPYG00000008893) #24	SNX11 (ENSPPYG00000008892) #27	ENSPPYG00000008891 ##28	NFE2L1 (ENSPPYG00000036998) #29	ENSPPYG00000008889 #30	CDK5RAP3 (ENSPPYG00000008888) #31	PRR15L (ENSPPYG00000008887) #32	PNPO (ENSPPYG00000040967) #33	SP2 (ENSPPYG00000008885) #34	SP6 (ENSPPYG00000008884) #36	SCRN2 (ENSPPYG00000008883) #37	LRRC46 (ENSPPYG00000032761)	MRPL10 (ENSPPYG00000008881)	OSBPL7 (ENSPPYG00000008880)
Gibbon	MODERN SPECIES	105	ENSNLEG00000002931	B4GALNT2 (ENSNLEG00000002844)	IGF2BP1 (ENSNLEG00000002786)	GIP (ENSNLEG00000002767)	SNF8 (ENSNLEG00000002743)	ENSNLEG00000002739	ATP5MC1 (ENSNLEG00000002718)	CALCOCO2 (ENSNLEG00000002619) #8	TTLL6 (ENSNLEG00000002601) #11	HOXB13 (ENSNLEG00000002594) #12	ENSNLEG00000036120	ENSNLEG00000029075	HOXB6 (ENSNLEG00000002585) #18	HOXB5 (ENSNLEG00000002574) #19	HOXB4 (ENSNLEG00000002570) #20	HOXB2 (ENSNLEG00000002566) #22	ENSNLEG00000018815 #23	SKAP1 (ENSNLEG00000002519) #24	SNX11 (ENSNLEG00000002479) #27	ENSNLEG00000002435 #28	NFE2L1 (ENSNLEG00000002415) #29	ENSNLEG00000002409 #30	ENSNLEG00000002109 #31	PRR15L (ENSNLEG00000002102) #32	PNPO (ENSNLEG00000002062) #33	ENSNLEG00000002058 #34	SP6 (ENSNLEG00000002050) #36	SCRN2 (ENSNLEG00000001940) #37	LRRC46 (ENSNLEG00000001902)	MRPL10 (ENSNLEG00000001803)	OSBPL7 (ENSNLEG00000001657)
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00390000007843.u.a	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Cebidae	ANCESTRAL SPECIES	10	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.u.a	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000154172.gb.b.b.b	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a.t.b #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00860000135909	ENSGT01050000247531	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000154172.gb.b.b.b	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Capuchin	MODERN SPECIES	228						HOXB13 (ENSCCAG00000036871) #12	ENSCCAG00000036164	ENSCCAG00000019672	HOXB7 (ENSCCAG00000023947) #17	HOXB9 (ENSCCAG00000035938) #15	HOXB8 (ENSCCAG00000026051) #16	HOXB6 (ENSCCAG00000022842) #18	HOXB5 (ENSCCAG00000036867) #19	HOXB4 (ENSCCAG00000020311) #20	HOXB3 (ENSCCAG00000013598)	HOXB2 (ENSCCAG00000024035) #22	HOXB1 (ENSCCAG00000027667) #23	ENSCCAG00000019181	SKAP1 (ENSCCAG00000035663) #24	SNX11 (ENSCCAG00000030167) #27	CBX1 (ENSCCAG00000025085) #28	NFE2L1 (ENSCCAG00000029090) #29	COPZ2 (ENSCCAG00000021292) #30	CDK5RAP3 (ENSCCAG00000038053) #31	PNPO (ENSCCAG00000029175) #33	SP2 (ENSCCAG00000038047) #34	SP6 (ENSCCAG00000020330) #36	SCRN2 (ENSCCAG00000031435) #37	LRRC46 (ENSCCAG00000030568)	MRPL10 (ENSCCAG00000023150)	OSBPL7 (ENSCCAG00000034097)
Bolivian squirrel monkey	MODERN SPECIES	86	ENSSBOG00000028176	UBE2Z (ENSSBOG00000036224)	ENSSBOG00000028794	CALCOCO2 (ENSSBOG00000035276) #8	TTLL6 (ENSSBOG00000028908) #11	HOXB13 (ENSSBOG00000029964) #12	PRAC2 (ENSSBOG00000032603)	ENSSBOG00000030794	HOXB9 (ENSSBOG00000030218) #15	HOXB8 (ENSSBOG00000034884) #16	HOXB7 (ENSSBOG00000020028) #17	HOXB6 (ENSSBOG00000031900) #18	HOXB5 (ENSSBOG00000018198) #19	HOXB4 (ENSSBOG00000024432) #20	HOXB3 (ENSSBOG00000030844)	HOXB2 (ENSSBOG00000025070) #22	HOXB1 (ENSSBOG00000034875) #23	ENSSBOG00000019520	SKAP1 (ENSSBOG00000029434) #24	SNX11 (ENSSBOG00000026967) #27	ENSSBOG00000031880 ##28	NFE2L1 (ENSSBOG00000023867) #29	COPZ2 (ENSSBOG00000033633) #30	CDK5RAP3 (ENSSBOG00000033272) #31	PRR15L (ENSSBOG00000019240) #32	PNPO (ENSSBOG00000021213) #33	SP2 (ENSSBOG00000029098) #34	SP6 (ENSSBOG00000014210) #36	SCRN2 (ENSSBOG00000027391) #37	LRRC46 (ENSSBOG00000026980)	MRPL10 (ENSSBOG00000004214)
Marmoset	MODERN SPECIES	17	IGF2BP1 (ENSCJAG00000007258)	GIP (ENSCJAG00000007300)	SNF8 (ENSCJAG00000007322)	UBE2Z (ENSCJAG00000007326)	ATP5MC1 (ENSCJAG00000075375)	CALCOCO2 (ENSCJAG00000007375) #8	TTLL6 (ENSCJAG00000007395) #11	HOXB13 (ENSCJAG00000007437) #12	HOXB9 (ENSCJAG00000007442) #15	HOXB8 (ENSCJAG00000045730) #16	HOXB7 (ENSCJAG00000007457) #17	HOXB6 (ENSCJAG00000007467) #18	HOXB5 (ENSCJAG00000007472) #19	HOXB4 (ENSCJAG00000007480) #20	HOXB3 (ENSCJAG00000007487)	HOXB2 (ENSCJAG00000007494) #22	HOXB1 (ENSCJAG00000007496) #23	ENSCJAG00000038853	SKAP1 (ENSCJAG00000007504) #24	SNX11 (ENSCJAG00000039549) #27	CBX1 (ENSCJAG00000042052) #28	NFE2L1 (ENSCJAG00000007542) #29	ENSCJAG00000058197	COPZ2 (ENSCJAG00000007567) #30	CDK5RAP3 (ENSCJAG00000007669) #31	PRR15L (ENSCJAG00000044487) #32	PNPO (ENSCJAG00000007693) #33	SP2 (ENSCJAG00000007713) #34	SP6 (ENSCJAG00000043946) #36	SCRN2 (ENSCJAG00000047705) #37	LRRC46 (ENSCJAG00000007776)
Mas night monkey	MODERN SPECIES	481	SNF8 (ENSANAG00000032764)	UBE2Z (ENSANAG00000029636)	ATP5MC1 (ENSANAG00000024881)	ENSANAG00000020581 #8	TTLL6 (ENSANAG00000031133) #11	PRAC2 (ENSANAG00000025557)	HOXB13 (ENSANAG00000023991) #12	ENSANAG00000030331	HOXB9 (ENSANAG00000035156) #15	HOXB8 (ENSANAG00000028346) #16	HOXB7 (ENSANAG00000025513) #17	HOXB6 (ENSANAG00000023964) #18	HOXB5 (ENSANAG00000024299) #19	HOXB4 (ENSANAG00000024005) #20	HOXB3 (ENSANAG00000032072)	HOXB2 (ENSANAG00000023626) #22	HOXB1 (ENSANAG00000032306) #23	ENSANAG00000023400	SKAP1 (ENSANAG00000026853) #24	SNX11 (ENSANAG00000022588) #27	ENSANAG00000036853 ##28	NFE2L1 (ENSANAG00000027606) #29	COPZ2 (ENSANAG00000023309) #30	CDK5RAP3 (ENSANAG00000021880) #31	PNPO (ENSANAG00000026080) #33	SP2 (ENSANAG00000032738) #34	SP6 (ENSANAG00000019338) #36	SCRN2 (ENSANAG00000021482) #37	LRRC46 (ENSANAG00000028496)	MRPL10 (ENSANAG00000022792)	OSBPL7 (ENSANAG00000021406)
Tarsier	MODERN SPECIES	4193										HOXB7 (ENSTSYG00000028173) #17	HOXB6 (ENSTSYG00000031001) #18	HOXB5 (ENSTSYG00000032912) #19	HOXB4 (ENSTSYG00000026874) #20	ENSTSYG00000029322 #21	HOXB3 (ENSTSYG00000035231)	HOXB2 (ENSTSYG00000004903) #22	HOXB1 (ENSTSYG00000004656) #23
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00950000185410	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590.h #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00950000185410	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590.h #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Mouse lemur	MODERN SPECIES	7	ENSMICG00000013324	GIP (ENSMICG00000013317)	SNF8 (ENSMICG00000013305)	UBE2Z (ENSMICG00000046102)	ENSMICG00000003414	CALCOCO2 (ENSMICG00000015330) #8	TTLL6 (ENSMICG00000007549) #11	HOXB13 (ENSMICG00000007546) #12	HOXB9 (ENSMICG00000038413) #15	HOXB8 (ENSMICG00000045961) #16	HOXB7 (ENSMICG00000007539) #17	HOXB6 (ENSMICG00000042216) #18	HOXB5 (ENSMICG00000047139) #19	HOXB4 (ENSMICG00000043173) #20	HOXB3 (ENSMICG00000007522)	HOXB2 (ENSMICG00000038222) #22	HOXB1 (ENSMICG00000048152) #23	SKAP1 (ENSMICG00000047158) #24	ENSMICG00000029923	SNX11 (ENSMICG00000014741) #27	NFE2L1 (ENSMICG00000014716) #29	ENSMICG00000009510 #28	COPZ2 (ENSMICG00000014097) #30	CDK5RAP3 (ENSMICG00000014077) #31	ENSMICG00000014065 #33	SP2 (ENSMICG00000036051) #34	SP6 (ENSMICG00000047695) #36	SCRN2 (ENSMICG00000004823) #37	LRRC46 (ENSMICG00000004816)	MRPL10 (ENSMICG00000048091)	OSBPL7 (ENSMICG00000004799)
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00950000185410	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590.h #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Coquerels sifaka	MODERN SPECIES	120	IGF2BP1 (ENSPCOG00000006475)	GIP (ENSPCOG00000024832)	SNF8 (ENSPCOG00000026895)	UBE2Z (ENSPCOG00000014816)	ENSPCOG00000008741	CALCOCO2 (ENSPCOG00000021998) #8	TTLL6 (ENSPCOG00000021391) #11	HOXB13 (ENSPCOG00000018182) #12	HOXB9 (ENSPCOG00000027130) #15	HOXB8 (ENSPCOG00000024853) #16	HOXB7 (ENSPCOG00000028248) #17	HOXB6 (ENSPCOG00000019931) #18	HOXB5 (ENSPCOG00000015692) #19	HOXB4 (ENSPCOG00000022963) #20	HOXB3 (ENSPCOG00000020113)	HOXB2 (ENSPCOG00000017380) #22	HOXB1 (ENSPCOG00000025930) #23	SKAP1 (ENSPCOG00000022221) #24	SNX11 (ENSPCOG00000011015) #27	ENSPCOG00000010902 #28	NFE2L1 (ENSPCOG00000021740) #29	COPZ2 (ENSPCOG00000018359) #30	CDK5RAP3 (ENSPCOG00000016598) #31	PNPO (ENSPCOG00000017906) #33	SP2 (ENSPCOG00000017198) #34	SP6 (ENSPCOG00000008529) #36	SCRN2 (ENSPCOG00000014438) #37	LRRC46 (ENSPCOG00000015829)	MRPL10 (ENSPCOG00000025492)	OSBPL7 (ENSPCOG00000019714)	TBX21 (ENSPCOG00000014387)
Greater bamboo lemur	MODERN SPECIES	168	IGF2BP1 (ENSPSMG00000020445)	GIP (ENSPSMG00000020432)	SNF8 (ENSPSMG00000020426)	UBE2Z (ENSPSMG00000020387)	ENSPSMG00000020369	CALCOCO2 (ENSPSMG00000020308) #8	ENSPSMG00000020243 #11	HOXB13 (ENSPSMG00000020237) #12	HOXB9 (ENSPSMG00000020232) #15	HOXB8 (ENSPSMG00000020227) #16	HOXB7 (ENSPSMG00000020218) #17	HOXB6 (ENSPSMG00000020209) #18	HOXB5 (ENSPSMG00000020200) #19	HOXB4 (ENSPSMG00000020187) #20	HOXB3 (ENSPSMG00000020182)	HOXB2 (ENSPSMG00000020176) #22	HOXB1 (ENSPSMG00000020167) #23	SKAP1 (ENSPSMG00000020161) #24	SNX11 (ENSPSMG00000020139) #27	CBX1 (ENSPSMG00000020119) #28
Bushbaby	MODERN SPECIES	133	GIP (ENSOGAG00000010130)	ENSOGAG00000001269	UBE2Z (ENSOGAG00000001267)	ATP5MC1 (ENSOGAG00000011713)	CALCOCO2 (ENSOGAG00000011709) #8	TTLL6 (ENSOGAG00000011701) #11	HOXB13 (ENSOGAG00000032643) #12	ENSOGAG00000034464	HOXB9 (ENSOGAG00000008668) #15	HOXB8 (ENSOGAG00000029480) #16	HOXB7 (ENSOGAG00000008667) #17	HOXB6 (ENSOGAG00000008661) #18	HOXB5 (ENSOGAG00000032432) #19	HOXB4 (ENSOGAG00000033709) #20	HOXB3 (ENSOGAG00000032090)	HOXB2 (ENSOGAG00000029280) #22	HOXB1 (ENSOGAG00000031645) #23	SKAP1 (ENSOGAG00000015855) #24	SNX11 (ENSOGAG00000015854) #27	CBX1 (ENSOGAG00000005658) #28	NFE2L1 (ENSOGAG00000025191) #29	COPZ2 (ENSOGAG00000004954) #30	CDK5RAP3 (ENSOGAG00000004951) #31	PRR15L (ENSOGAG00000006187) #32	PNPO (ENSOGAG00000006186) #33	SP2 (ENSOGAG00000030380) #34	SP6 (ENSOGAG00000030282) #36	SCRN2 (ENSOGAG00000006181) #37	LRRC46 (ENSOGAG00000006177)	MRPL10 (ENSOGAG00000006173)	OSBPL7 (ENSOGAG00000006166)
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00390000005121	ENSGT00390000007843	ENSGT00990000209473	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Tree shrew	MODERN SPECIES	88																HOXB2 (ENSTBEG00000015126) #22	SKAP1 (ENSTBEG00000015048) #24	SNX11 (ENSTBEG00000014960) #27	CBX1 (ENSTBEG00000014931) #28
Glires	ANCESTRAL SPECIES	3	ENSGT00390000005121	ENSGT00390000007843	ENSGT00990000209473	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Lagomorpha	ANCESTRAL SPECIES		ENSGT01100000263525.b.a	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Rabbit	MODERN SPECIES	10	B4GALNT2 (ENSOCUG00000003531)	IGF2BP1 (ENSOCUG00000004411)	GIP (ENSOCUG00000004410)	SNF8 (ENSOCUG00000009156)	UBE2Z (ENSOCUG00000009159)	ATP5MC1 (ENSOCUG00000016225)	CALCOCO2 (ENSOCUG00000016209) #8	ENSOCUG00000038154	TTLL6 (ENSOCUG00000006289) #11	HOXB13 (ENSOCUG00000012816) #12	HOXB9 (ENSOCUG00000027316) #15	HOXB8 (ENSOCUG00000029186) #16	HOXB5 (ENSOCUG00000023093) #19	HOXB6 (ENSOCUG00000011560) #18	HOXB3 (ENSOCUG00000023337)	HOXB2 (ENSOCUG00000024951) #22	HOXB1 (ENSOCUG00000001720) #23	SKAP1 (ENSOCUG00000001717) #24	SNX11 (ENSOCUG00000002309) #27	CBX1 (ENSOCUG00000008021) #28	NFE2L1 (ENSOCUG00000022298) #29	COPZ2 (ENSOCUG00000001802) #30	CDK5RAP3 (ENSOCUG00000012325) #31	PRR15L (ENSOCUG00000017489) #32	PNPO (ENSOCUG00000017484) #33	SP2 (ENSOCUG00000027415) #34	SP6 (ENSOCUG00000023482) #36	SCRN2 (ENSOCUG00000009457) #37	LRRC46 (ENSOCUG00000009453)	MRPL10 (ENSOCUG00000009452)	OSBPL7 (ENSOCUG00000009447)
Pika	MODERN SPECIES	3527												ENSOPRG00000000402	HOXB6 (ENSOPRG00000000399) #18	HOXB5 (ENSOPRG00000000394) #19	HOXB3 (ENSOPRG00000000392)	HOXB2 (ENSOPRG00000000389) #22
Rodentia	ANCESTRAL SPECIES	4	ENSGT00390000005121	ENSGT00390000007843	ENSGT00990000209473	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Muroidea	ANCESTRAL SPECIES		ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Cricetidae	ANCESTRAL SPECIES		ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.ab	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.a.a ##28	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.ab	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Northern American deer mouse	MODERN SPECIES	21	Gngt2 (ENSPEMG00000027491)	B4galnt2 (ENSPEMG00000020717)	Igf2bp1 (ENSPEMG00000021974)	Gip (ENSPEMG00000021184)	Snf8 (ENSPEMG00000022229)	Ube2z (ENSPEMG00000020953)	Atp5g1 (ENSPEMG00000020590)	ENSPEMG00000028729 #8	ENSPEMG00000025676 #8	Ttll6 (ENSPEMG00000021918) #11	Hoxb13 (ENSPEMG00000021511) #12	Hoxb9 (ENSPEMG00000027158) #15	Hoxb5 (ENSPEMG00000030101) #19	Hoxb4 (ENSPEMG00000029805) #20	Hoxb3 (ENSPEMG00000028692)	Hoxb2 (ENSPEMG00000029510) #22	Hoxb1 (ENSPEMG00000023977) #23	Skap1 (ENSPEMG00000000585) #24	ENSPEMG00000020286	Snx11 (ENSPEMG00000000381) #27	Cbx1 (ENSPEMG00000020976) ##28	Nfe2l1 (ENSPEMG00000010512) #29	Copz2 (ENSPEMG00000011137) #30	Cdk5rap3 (ENSPEMG00000020712) #31	ENSPEMG00000030963	Prr15l (ENSPEMG00000024436) #32	Pnpo (ENSPEMG00000025094) #33	Sp2 (ENSPEMG00000017112) #34	Sp6 (ENSPEMG00000001231) #36	Scrn2 (ENSPEMG00000020381) #37	Lrrc46 (ENSPEMG00000020507)
Prairie vole	MODERN SPECIES	114		ENSMOCG00000004266	ENSMOCG00000021226	Snf8 (ENSMOCG00000016684)	Ube2z (ENSMOCG00000018241)	ENSMOCG00000013163	Ttll6 (ENSMOCG00000021089) #11	Hoxb13 (ENSMOCG00000021389) #12	Hoxb9 (ENSMOCG00000020312) #15	Hoxb8 (ENSMOCG00000018435) #16	Hoxb7 (ENSMOCG00000020820) #17	Hoxb6 (ENSMOCG00000020355) #18	Hoxb5 (ENSMOCG00000014523) #19	Hoxb4 (ENSMOCG00000022964) #20	Hoxb3 (ENSMOCG00000020739)	Hoxb2 (ENSMOCG00000014846) #22	Hoxb1 (ENSMOCG00000002452) #23	Skap1 (ENSMOCG00000018431) #24	Snx11 (ENSMOCG00000019303) #27	Cbx1 (ENSMOCG00000001520) #28	Nfe2l1 (ENSMOCG00000016002) #29	Copz2 (ENSMOCG00000022427) #30	Cdk5rap3 (ENSMOCG00000019534) #31	Prr15l (ENSMOCG00000006695) #32	Pnpo (ENSMOCG00000011655) #33	Sp2 (ENSMOCG00000020935) #34	Sp6 (ENSMOCG00000007065) #36	Scrn2 (ENSMOCG00000019511) #37	Lrrc46 (ENSMOCG00000016707)	Mrpl10 (ENSMOCG00000019451)	Osbpl7 (ENSMOCG00000021054)
Cricetinae	ANCESTRAL SPECIES		ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.`b.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.a.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Golden Hamster	MODERN SPECIES	674	Gngt2 (ENSMAUG00000019144)	B4galnt2 (ENSMAUG00000007916)	Gip (ENSMAUG00000009238)	Snf8 (ENSMAUG00000001857)	Ube2z (ENSMAUG00000007792)	ENSMAUG00000021751	Ttll6 (ENSMAUG00000020973) #11	Hoxb13 (ENSMAUG00000008407) #12	Hoxb9 (ENSMAUG00000017720) #15	Hoxb8 (ENSMAUG00000012636) #16	Hoxb7 (ENSMAUG00000021297) #17	Hoxb6 (ENSMAUG00000021423) #18	Hoxb5 (ENSMAUG00000021419) #19	Hoxb4 (ENSMAUG00000009367) #20	Hoxb3 (ENSMAUG00000011251)	Hoxb2 (ENSMAUG00000021979) #22	Hoxb1 (ENSMAUG00000013237) #23	Skap1 (ENSMAUG00000022191) #24	Snx11 (ENSMAUG00000021528) #27	ENSMAUG00000003463 #28	Nfe2l1 (ENSMAUG00000020456) #29	Copz2 (ENSMAUG00000010560) #30	Cdk5rap3 (ENSMAUG00000007991) #31	Pnpo (ENSMAUG00000021706) #33	Sp2 (ENSMAUG00000019269) #34	Sp6 (ENSMAUG00000009667) #36	Scrn2 (ENSMAUG00000010014) #37	Lrrc46 (ENSMAUG00000019416)	Mrpl10 (ENSMAUG00000000820)	Osbpl7 (ENSMAUG00000013876)	Tbx21 (ENSMAUG00000017507)
Chinese hamster chok1gshd	MODERN SPECIES	33	Gip (ENSCGRG00001021533)	Snf8 (ENSCGRG00001000737)	Ube2z (ENSCGRG00001019150)	ENSCGRG00001022606	ENSCGRG00001010560	ENSCGRG00001011435 #8	Ttll6 (ENSCGRG00001018398) #11	Hoxb13 (ENSCGRG00001015060) #12	Hoxb9 (ENSCGRG00001015314) #15	Hoxb8 (ENSCGRG00001020235) #16	Hoxb7 (ENSCGRG00001021590) #17	Hoxb6 (ENSCGRG00001015674) #18	Hoxb5 (ENSCGRG00001016167) #19	Hoxb4 (ENSCGRG00001022431) #20	Hoxb3 (ENSCGRG00001016667)	Hoxb2 (ENSCGRG00001017587) #22	Hoxb1 (ENSCGRG00001024619) #23	ENSCGRG00001023355 #24	ENSCGRG00001020759 #24	Snx11 (ENSCGRG00001022221) #27	Cbx1 (ENSCGRG00001014799) ##28	Nfe2l1 (ENSCGRG00001015287) #29	Copz2 (ENSCGRG00001014767) #30	Cdk5rap3 (ENSCGRG00001006966) #31	Prr15l (ENSCGRG00001008926) #32	Pnpo (ENSCGRG00001018189) #33	Sp2 (ENSCGRG00001010976) #34	Sp6 (ENSCGRG00001002797) #36	Scrn2 (ENSCGRG00001022143) #37	Lrrc46 (ENSCGRG00001019758)	Mrpl10 (ENSCGRG00001024199)
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Mus	ANCESTRAL SPECIES	2	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Mouse	MODERN SPECIES	2	Igf2bp1 (ENSMUSG00000013415)	Gip (ENSMUSG00000014351)	Snf8 (ENSMUSG00000006058)	Ube2z (ENSMUSG00000014349)	Atp5g1 (ENSMUSG00000006057)	Calcoco2 (ENSMUSG00000006056) #8	Ttll6 (ENSMUSG00000038756) #11	Hoxb13 (ENSMUSG00000049604) #12	Hoxb9 (ENSMUSG00000020875) #15	Hoxb8 (ENSMUSG00000056648) #16	Hoxb7 (ENSMUSG00000038721) #17	Hoxb6 (ENSMUSG00000000690) #18	Hoxb5 (ENSMUSG00000038700) #19	Hoxb4 (ENSMUSG00000038692) #20	Hoxb3 (ENSMUSG00000048763)	Hoxb2 (ENSMUSG00000075588) #22	Hoxb1 (ENSMUSG00000018973) #23	Skap1 (ENSMUSG00000057058) #24	Snx11 (ENSMUSG00000020876) #27	Cbx1 (ENSMUSG00000018666) #28	Nfe2l1 (ENSMUSG00000038615) #29	Copz2 (ENSMUSG00000018672) #30	Cdk5rap3 (ENSMUSG00000018669) #31	Prr15l (ENSMUSG00000047040) #32	Pnpo (ENSMUSG00000018659) #33	Sp2 (ENSMUSG00000018678) #34	Sp6 (ENSMUSG00000038560) #36	Scrn2 (ENSMUSG00000020877) #37	Lrrc46 (ENSMUSG00000020878)	Mrpl10 (ENSMUSG00000001445)	Osbpl7 (ENSMUSG00000038534)
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Steppe mouse	MODERN SPECIES	3291	Gip (ENSMSIG00000019162)	Snf8 (ENSMSIG00000019072)	Ube2z (ENSMSIG00000019038)	Atp5g1 (ENSMSIG00000018986)	ENSMSIG00000018956 #8	Ttll6 (ENSMSIG00000018881) #11	Hoxb13 (ENSMSIG00000018865) #12	Hoxb9 (ENSMSIG00000018823) #15	Hoxb8 (ENSMSIG00000018807) #16	Hoxb7 (ENSMSIG00000018805) #17	Hoxb6 (ENSMSIG00000018795) #18	Hoxb5 (ENSMSIG00000018787) #19	Hoxb4 (ENSMSIG00000018777) #20	ENSMSIG00000018776	Hoxb3 (ENSMSIG00000018771)	Hoxb2 (ENSMSIG00000018769) #22	Hoxb1 (ENSMSIG00000018752) #23	Skap1 (ENSMSIG00000018601) #24	Snx11 (ENSMSIG00000018546) #27	ENSMSIG00000018520	Cbx1 (ENSMSIG00000018447) #28	Nfe2l1 (ENSMSIG00000018374) #29	Copz2 (ENSMSIG00000018337) #30	Cdk5rap3 (ENSMSIG00000018309) #31	ENSMSIG00000018270 #32	ENSMSIG00000018267 #33	Sp2 (ENSMSIG00000018237) #34	Sp6 (ENSMSIG00000018223) #36	Scrn2 (ENSMSIG00000018202) #37	Lrrc46 (ENSMSIG00000018171)	Mrpl10 (ENSMSIG00000018160)
spretus	MODERN SPECIES	2	Igf2bp1 (MGP_SPRETEiJ_G0017862)	Gip (MGP_SPRETEiJ_G0017863)	Snf8 (MGP_SPRETEiJ_G0017864)	Ube2z (MGP_SPRETEiJ_G0017865)	Atp5g1 (MGP_SPRETEiJ_G0017866)	MGP_SPRETEiJ_G0017867 #8	Ttll6 (MGP_SPRETEiJ_G0017868) #11	Hoxb13 (MGP_SPRETEiJ_G0017869) #12	Hoxb9 (MGP_SPRETEiJ_G0017870) #15	Hoxb8 (MGP_SPRETEiJ_G0017871) #16	Hoxb7 (MGP_SPRETEiJ_G0017872) #17	Hoxb6 (MGP_SPRETEiJ_G0017873) #18	Hoxb5 (MGP_SPRETEiJ_G0017874) #19	Hoxb4 (MGP_SPRETEiJ_G0017875) #20	Hoxb3 (MGP_SPRETEiJ_G0017876)	Hoxb2 (MGP_SPRETEiJ_G0017877) #22	Hoxb1 (MGP_SPRETEiJ_G0017878) #23	MGP_SPRETEiJ_G0017879 #24	Snx11 (MGP_SPRETEiJ_G0017880) #27	Cbx1 (MGP_SPRETEiJ_G0017881) #28	MGP_SPRETEiJ_G0017882	Nfe2l1 (MGP_SPRETEiJ_G0017883) #29	Copz2 (MGP_SPRETEiJ_G0017884) #30	Cdk5rap3 (MGP_SPRETEiJ_G0017885) #31	Prr15l (MGP_SPRETEiJ_G0017886) #32	Pnpo (MGP_SPRETEiJ_G0017887) #33	Sp2 (MGP_SPRETEiJ_G0017888) #34	Sp6 (MGP_SPRETEiJ_G0017889) #36	Scrn2 (MGP_SPRETEiJ_G0017890) #37	Lrrc46 (MGP_SPRETEiJ_G0017891)	Mrpl10 (MGP_SPRETEiJ_G0017892)
Ryukyu mouse	MODERN SPECIES	2	Igf2bp1 (MGP_CAROLIEiJ_G0017016)	Gip (MGP_CAROLIEiJ_G0017017)	Snf8 (MGP_CAROLIEiJ_G0017018)	MGP_CAROLIEiJ_G0017019	MGP_CAROLIEiJ_G0017020	MGP_CAROLIEiJ_G0017021 #8	Ttll6 (MGP_CAROLIEiJ_G0017022) #11	Hoxb13 (MGP_CAROLIEiJ_G0017023) #12	Hoxb9 (MGP_CAROLIEiJ_G0017024) #15	Hoxb8 (MGP_CAROLIEiJ_G0017025) #16	Hoxb7 (MGP_CAROLIEiJ_G0017026) #17	Hoxb6 (MGP_CAROLIEiJ_G0017027) #18	Hoxb5 (MGP_CAROLIEiJ_G0017028) #19	Hoxb4 (MGP_CAROLIEiJ_G0017029) #20	Hoxb3 (MGP_CAROLIEiJ_G0017030)	Hoxb2 (MGP_CAROLIEiJ_G0017031) #22	Hoxb1 (MGP_CAROLIEiJ_G0017032) #23	Skap1 (MGP_CAROLIEiJ_G0017033) #24	Snx11 (MGP_CAROLIEiJ_G0017034) #27	Cbx1 (MGP_CAROLIEiJ_G0017035) #28	MGP_CAROLIEiJ_G0017036	Nfe2l1 (MGP_CAROLIEiJ_G0017037) #29	Copz2 (MGP_CAROLIEiJ_G0017038) #30	Cdk5rap3 (MGP_CAROLIEiJ_G0017039) #31	Prr15l (MGP_CAROLIEiJ_G0017040) #32	Pnpo (MGP_CAROLIEiJ_G0017041) #33	Sp2 (MGP_CAROLIEiJ_G0017042) #34	Sp6 (MGP_CAROLIEiJ_G0017043) #36	MGP_CAROLIEiJ_G0017044 #37	Lrrc46 (MGP_CAROLIEiJ_G0017045)	Mrpl10 (MGP_CAROLIEiJ_G0017046)
Shrew mouse	MODERN SPECIES	5	MGP_PahariEiJ_G0018146	Gip (MGP_PahariEiJ_G0018147)	Snf8 (MGP_PahariEiJ_G0018148)	Ube2z (MGP_PahariEiJ_G0018149)	Atp5g1 (MGP_PahariEiJ_G0018150)	MGP_PahariEiJ_G0018151 #8	Ttll6 (MGP_PahariEiJ_G0018152) #11	Hoxb13 (MGP_PahariEiJ_G0018153) #12	Hoxb9 (MGP_PahariEiJ_G0018154) #15	Hoxb8 (MGP_PahariEiJ_G0018155) #16	Hoxb7 (MGP_PahariEiJ_G0018156) #17	Hoxb6 (MGP_PahariEiJ_G0018157) #18	Hoxb5 (MGP_PahariEiJ_G0018158) #19	Hoxb4 (MGP_PahariEiJ_G0018159) #20	Hoxb3 (MGP_PahariEiJ_G0018160)	Hoxb2 (MGP_PahariEiJ_G0018161) #22	Hoxb1 (MGP_PahariEiJ_G0018162) #23	Skap1 (MGP_PahariEiJ_G0018163) #24	Snx11 (MGP_PahariEiJ_G0018164) #27	Cbx1 (MGP_PahariEiJ_G0018165) #28	MGP_PahariEiJ_G0018166	Nfe2l1 (MGP_PahariEiJ_G0018167) #29	Copz2 (MGP_PahariEiJ_G0018168) #30	Cdk5rap3 (MGP_PahariEiJ_G0018169) #31	Prr15l (MGP_PahariEiJ_G0018170) #32	Pnpo (MGP_PahariEiJ_G0018171) #33	Sp2 (MGP_PahariEiJ_G0018172) #34	Sp6 (MGP_PahariEiJ_G0018173) #36	Scrn2 (MGP_PahariEiJ_G0018174) #37	Lrrc46 (MGP_PahariEiJ_G0018175)	Mrpl10 (MGP_PahariEiJ_G0018176)
Rat	MODERN SPECIES	1	B4galnt2 (ENSRNOG00000067203)	Igf2bp1 (ENSRNOG00000006122)	Gip (ENSRNOG00000006306)	Snf8 (ENSRNOG00000006500)	Ube2z (ENSRNOG00000006868)	ENSRNOG00000066153 #8	Ttll6 (ENSRNOG00000004939) #11	Hoxb13 (ENSRNOG00000007491) #12	Hoxb9 (ENSRNOG00000007573) #15	Hoxb8 (ENSRNOG00000007585) #16	Hoxb7 (ENSRNOG00000007611) #17	Hoxb6 (ENSRNOG00000007823) #18	Hoxb5 (ENSRNOG00000008010) #19	Hoxb4 (ENSRNOG00000008191) #20	Hoxb3 (ENSRNOG00000008313)	Hoxb2 (ENSRNOG00000008365) #22	Hoxb1 (ENSRNOG00000008506) #23	Skap1 (ENSRNOG00000023881) #24	Snx11 (ENSRNOG00000008642) #27	Cbx1 (ENSRNOG00000008689) #28	Nfe2l1 (ENSRNOG00000008830) #29	Copz2 (ENSRNOG00000009225) #30	Cdk5rap3 (ENSRNOG00000048747) #31	Prr15l (ENSRNOG00000049162) #32	Pnpo (ENSRNOG00000046493) #33	Sp2 (ENSRNOG00000010492) #34	Sp6 (ENSRNOG00000023551) #36	Scrn2 (ENSRNOG00000010214) #37	Lrrc46 (ENSRNOG00000009902)	Mrpl10 (ENSRNOG00000009567)	Osbpl7 (ENSRNOG00000009473)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1028	Igf2bp1 (ENSNGAG00000015679)	Gip (ENSNGAG00000020354)	Snf8 (ENSNGAG00000001366)	Ube2z (ENSNGAG00000024296)	ENSNGAG00000024212	ENSNGAG00000023585 #8	Ttll6 (ENSNGAG00000011763) #11	Hoxb13 (ENSNGAG00000011053) #12	Hoxb9 (ENSNGAG00000010851) #15	Hoxb8 (ENSNGAG00000010647) #16	Hoxb7 (ENSNGAG00000010205) #17	Hoxb6 (ENSNGAG00000000973) #18	Hoxb5 (ENSNGAG00000023238) #19	Hoxb4 (ENSNGAG00000021768) #20	Hoxb3 (ENSNGAG00000020227)	Hoxb2 (ENSNGAG00000019089) #22	Hoxb1 (ENSNGAG00000018593) #23	Skap1 (ENSNGAG00000012571) #24	Snx11 (ENSNGAG00000010446) #27	Cbx1 (ENSNGAG00000006760) #28	Nfe2l1 (ENSNGAG00000000736) #29	Copz2 (ENSNGAG00000023713) #30	ENSNGAG00000000747 #31	ENSNGAG00000022529	Prr15l (ENSNGAG00000021432) #32	Pnpo (ENSNGAG00000020016) #33	Sp2 (ENSNGAG00000017612) #34	Sp6 (ENSNGAG00000015868) #36	Scrn2 (ENSNGAG00000023806) #37	Lrrc46 (ENSNGAG00000022557)	Mrpl10 (ENSNGAG00000022195)
Lesser Egyptian jerboa	MODERN SPECIES	56	B4galnt2 (ENSJJAG00000006322)	Igf2bp1 (ENSJJAG00000002687)	Gip (ENSJJAG00000010688)	Snf8 (ENSJJAG00000006012)	ENSJJAG00000003530	ENSJJAG00000010301	Ttll6 (ENSJJAG00000010253) #11	Hoxb13 (ENSJJAG00000010401) #12	Hoxb9 (ENSJJAG00000009821) #15	Hoxb8 (ENSJJAG00000002398) #16	Hoxb7 (ENSJJAG00000001284) #17	Hoxb6 (ENSJJAG00000000997) #18	Hoxb5 (ENSJJAG00000000763) #19	Hoxb4 (ENSJJAG00000002642) #20	Hoxb3 (ENSJJAG00000007804)	Hoxb2 (ENSJJAG00000009465) #22	Hoxb1 (ENSJJAG00000001073) #23	Skap1 (ENSJJAG00000003458) #24	ENSJJAG00000005754 #27	ENSJJAG00000007753 #28	Nfe2l1 (ENSJJAG00000006432) #29	Copz2 (ENSJJAG00000001025) #30	ENSJJAG00000002511 #31	Prr15l (ENSJJAG00000006478) #32	Pnpo (ENSJJAG00000023608) #33	Sp2 (ENSJJAG00000003061) #34	Sp6 (ENSJJAG00000006452) #36	Scrn2 (ENSJJAG00000023635) #37	Lrrc46 (ENSJJAG00000010412)	Mrpl10 (ENSJJAG00000004046)	Osbpl7 (ENSJJAG00000004477)
Kangaroo rat	MODERN SPECIES	326	Gngt2 (ENSDORG00000023588)	Igf2bp1 (ENSDORG00000014371)	Snf8 (ENSDORG00000009262)	Ube2z (ENSDORG00000009258)	ENSDORG00000008511	ENSDORG00000028385	ENSDORG00000024585 #8	Hoxb13 (ENSDORG00000008369) #12	Hoxb9 (ENSDORG00000027423) #15	Hoxb8 (ENSDORG00000007906) #16	Hoxb7 (ENSDORG00000007905) #17	Hoxb6 (ENSDORG00000023877) #18	Hoxb5 (ENSDORG00000007900) #19	Hoxb4 (ENSDORG00000007899) #20	Hoxb3 (ENSDORG00000007898)	Hoxb2 (ENSDORG00000007897) #22	Hoxb1 (ENSDORG00000007896) #23	Snx11 (ENSDORG00000029078) #27	Cbx1 (ENSDORG00000026399) #28	Nfe2l1 (ENSDORG00000000715) #29	Copz2 (ENSDORG00000013441) #30	Prr15l (ENSDORG00000027427) #32	Pnpo (ENSDORG00000014110) #33	Sp2 (ENSDORG00000014109) #34	Sp6 (ENSDORG00000026201) #36	Scrn2 (ENSDORG00000002361) #37	Osbpl7 (ENSDORG00000002354)	Tbx21 (ENSDORG00000013302)	Npepps (ENSDORG00000009627)	Socs7 (ENSDORG00000028979)	ENSDORG00000007713
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00390000005121	ENSGT00390000007843	ENSGT00990000209473	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Naked mole-rat female	MODERN SPECIES	12	ENSHGLG00000010703	SNF8 (ENSHGLG00000011519)	UBE2Z (ENSHGLG00000016280)	ATP5MC1 (ENSHGLG00000035460)	CALCOCO2 (ENSHGLG00000012114) #8	TTLL6 (ENSHGLG00000019187) #11	HOXB13 (ENSHGLG00000014634) #12	ENSHGLG00000048296	HOXB9 (ENSHGLG00000014731) #15	HOXB8 (ENSHGLG00000038380) #16	HOXB7 (ENSHGLG00000045318) #17	HOXB6 (ENSHGLG00000012400) #18	HOXB5 (ENSHGLG00000039265) #19	HOXB4 (ENSHGLG00000034075) #20	HOXB3 (ENSHGLG00000010686)	HOXB2 (ENSHGLG00000010090) #22	HOXB1 (ENSHGLG00000009781) #23	SKAP1 (ENSHGLG00000014563) #24	SNX11 (ENSHGLG00000016837) #27	CBX1 (ENSHGLG00000013574) #28	NFE2L1 (ENSHGLG00000012592) #29	COPZ2 (ENSHGLG00000018543) #30	CDK5RAP3 (ENSHGLG00000019464) #31	PRR15L (ENSHGLG00000014696) #32	PNPO (ENSHGLG00000013159) #33	SP2 (ENSHGLG00000009902) #34	SP6 (ENSHGLG00000021113) #36	SCRN2 (ENSHGLG00000041375) #37	LRRC46 (ENSHGLG00000035931)	MRPL10 (ENSHGLG00000048399)	OSBPL7 (ENSHGLG00000012525)
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Guinea pig	MODERN SPECIES	53	GNGT2 (ENSCPOG00000030054)	B4GALNT2 (ENSCPOG00000006191)	IGF2BP1 (ENSCPOG00000020174)	GIP (ENSCPOG00000023966)	SNF8 (ENSCPOG00000020610)	UBE2Z (ENSCPOG00000024416)	ENSCPOG00000009017	CALCOCO2 (ENSCPOG00000021273) #8	TTLL6 (ENSCPOG00000012509) #11	HOXB13 (ENSCPOG00000013509) #12	HOXB9 (ENSCPOG00000037597) #15	HOXB6 (ENSCPOG00000040707) #18	HOXB5 (ENSCPOG00000030746) #19	ENSCPOG00000010105	ENSCPOG00000010107	HOXB2 (ENSCPOG00000035468) #22	HOXB1 (ENSCPOG00000022183) #23	SKAP1 (ENSCPOG00000022118) #24	SNX11 (ENSCPOG00000020234) #27	CBX1 (ENSCPOG00000034435) #28	NFE2L1 (ENSCPOG00000030805) #29	COPZ2 (ENSCPOG00000019500) #30	CDK5RAP3 (ENSCPOG00000007275) #31	PRR15L (ENSCPOG00000035567) #32	PNPO (ENSCPOG00000003187) #33	SP2 (ENSCPOG00000014943) #34	SP6 (ENSCPOG00000007638) #36	SCRN2 (ENSCPOG00000006929) #37	LRRC46 (ENSCPOG00000006925)	MRPL10 (ENSCPOG00000037104)	OSBPL7 (ENSCPOG00000006914)
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Long-tailed chinchilla	MODERN SPECIES	158	B4GALNT2 (ENSCLAG00000016224)	IGF2BP1 (ENSCLAG00000015853)	ENSCLAG00000014301	SNF8 (ENSCLAG00000013387)	UBE2Z (ENSCLAG00000016068)	ATP5MC1 (ENSCLAG00000015723)	CALCOCO2 (ENSCLAG00000015881) #8	TTLL6 (ENSCLAG00000013529) #11	HOXB13 (ENSCLAG00000014855) #12	ENSCLAG00000015198 #15	HOXB7 (ENSCLAG00000014906) #17	HOXB6 (ENSCLAG00000015524) #18	HOXB5 (ENSCLAG00000014374) #19	HOXB4 (ENSCLAG00000014725) #20	HOXB3 (ENSCLAG00000015322)	HOXB2 (ENSCLAG00000015271) #22	HOXB1 (ENSCLAG00000013047) #23	SKAP1 (ENSCLAG00000015423) #24	SNX11 (ENSCLAG00000015837) #27	CBX1 (ENSCLAG00000013587) #28	NFE2L1 (ENSCLAG00000014836) #29	COPZ2 (ENSCLAG00000013544) #30	CDK5RAP3 (ENSCLAG00000012292) #31	PRR15L (ENSCLAG00000017903) #32	PNPO (ENSCLAG00000013871) #33	SP2 (ENSCLAG00000014115) #34	SP6 (ENSCLAG00000016276) #36	LRRC46 (ENSCLAG00000016713)	SCRN2 (ENSCLAG00000013965) #37	MRPL10 (ENSCLAG00000015400)	OSBPL7 (ENSCLAG00000014839)
Degu	MODERN SPECIES	97	B4GALNT2 (ENSODEG00000018456)	ENSODEG00000016991	ENSODEG00000017109	GIP (ENSODEG00000017003)	ENSODEG00000017032	UBE2Z (ENSODEG00000017306)	ATP5MC1 (ENSODEG00000017366)	TTLL6 (ENSODEG00000017145) #11	HOXB13 (ENSODEG00000017199) #12	HOXB9 (ENSODEG00000017293) #15	HOXB8 (ENSODEG00000017119) #16	HOXB6 (ENSODEG00000016988) #18	HOXB5 (ENSODEG00000017253) #19	HOXB4 (ENSODEG00000017038) #20	HOXB3 (ENSODEG00000017116)	HOXB2 (ENSODEG00000017153) #22	HOXB1 (ENSODEG00000017050) #23	SKAP1 (ENSODEG00000017533) #24	SNX11 (ENSODEG00000017458) #27	CBX1 (ENSODEG00000017272) #28	NFE2L1 (ENSODEG00000017348) #29	ENSODEG00000020421	COPZ2 (ENSODEG00000017565) #30	ENSODEG00000017229 #31	PNPO (ENSODEG00000017424) #33	SP2 (ENSODEG00000017126) #34	SP6 (ENSODEG00000017625) #36	SCRN2 (ENSODEG00000017395) #37	LRRC46 (ENSODEG00000017367)	MRPL10 (ENSODEG00000017536)	OSBPL7 (ENSODEG00000017364)
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00390000005121	ENSGT00390000007843	ENSGT00990000209473	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Marmotini	ANCESTRAL SPECIES	8	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Squirrel	MODERN SPECIES	90	GIP (ENSSTOG00000004043)	SNF8 (ENSSTOG00000004023)	UBE2Z (ENSSTOG00000000796)	ATP5MC1 (ENSSTOG00000013404)	ENSSTOG00000013395 #8	TTLL6 (ENSSTOG00000006016) #11	ENSSTOG00000025444	HOXB13 (ENSSTOG00000014942) #12	HOXB9 (ENSSTOG00000009741) #15	HOXB8 (ENSSTOG00000028337) #16	HOXB7 (ENSSTOG00000025657) #17	HOXB6 (ENSSTOG00000020303) #18	HOXB5 (ENSSTOG00000009740) #19	HOXB4 (ENSSTOG00000009734) #20	HOXB3 (ENSSTOG00000025093)	HOXB2 (ENSSTOG00000023586) #22	HOXB1 (ENSSTOG00000028630) #23	SKAP1 (ENSSTOG00000013692) #24	SNX11 (ENSSTOG00000013684) #27	CBX1 (ENSSTOG00000023986) #28	NFE2L1 (ENSSTOG00000013664) #29	ENSSTOG00000027550 #30	CDK5RAP3 (ENSSTOG00000006244) #31	PRR15L (ENSSTOG00000006235) #32	PNPO (ENSSTOG00000006221) #33	SP2 (ENSSTOG00000015926) #34	SP6 (ENSSTOG00000001607) #36	SCRN2 (ENSSTOG00000027108) #37	LRRC46 (ENSSTOG00000002068)	MRPL10 (ENSSTOG00000024617)	OSBPL7 (ENSSTOG00000001636)
Arctic ground squirrel	MODERN SPECIES	46	IGF2BP1 (ENSUPAG00010006100)	GIP (ENSUPAG00010006136)	SNF8 (ENSUPAG00010006148)	UBE2Z (ENSUPAG00010006178)	ENSUPAG00010006195	CALCOCO2 (ENSUPAG00010006243) #8	TTLL6 (ENSUPAG00010006267) #11	HOXB13 (ENSUPAG00010006301) #12	HOXB9 (ENSUPAG00010006305) #15	HOXB8 (ENSUPAG00010006310) #16	HOXB7 (ENSUPAG00010006312) #17	HOXB6 (ENSUPAG00010006317) #18	HOXB5 (ENSUPAG00010006320) #19	HOXB4 (ENSUPAG00010006325) #20	HOXB3 (ENSUPAG00010006328)	HOXB2 (ENSUPAG00010006336) #22	HOXB1 (ENSUPAG00010006340) #23	SKAP1 (ENSUPAG00010006345) #24	SNX11 (ENSUPAG00010006370) #27	CBX1 (ENSUPAG00010006381) #28	NFE2L1 (ENSUPAG00010006396) #29	COPZ2 (ENSUPAG00010006455) #30	CDK5RAP3 (ENSUPAG00010006466) #31	PRR15L (ENSUPAG00010006473) #32	PNPO (ENSUPAG00010006483) #33	SP2 (ENSUPAG00010006507) #34	SP6 (ENSUPAG00010006522) #36	SCRN2 (ENSUPAG00010006526) #37	LRRC46 (ENSUPAG00010006533)	MRPL10 (ENSUPAG00010006539)	OSBPL7 (ENSUPAG00010006545)
Eurasian red squirrel	MODERN SPECIES	12	GIP (ENSSVLG00005020522)	SNF8 (ENSSVLG00005020472)	ENSSVLG00005020450	UBE2Z (ENSSVLG00005020428)	ATP5MC1 (ENSSVLG00005020344)	CALCOCO2 (ENSSVLG00005020296) #8	TTLL6 (ENSSVLG00005020005) #11	HOXB13 (ENSSVLG00005019820) #12	HOXB9 (ENSSVLG00005019725) #15	HOXB8 (ENSSVLG00005019675) #16	HOXB7 (ENSSVLG00005019618) #17	HOXB6 (ENSSVLG00005019586) #18	HOXB5 (ENSSVLG00005019546) #19	HOXB4 (ENSSVLG00005019455) #20	HOXB3 (ENSSVLG00005019421)	HOXB2 (ENSSVLG00005019378) #22	HOXB1 (ENSSVLG00005019304) #23	SKAP1 (ENSSVLG00005019232) #24	SNX11 (ENSSVLG00005019122) #27	CBX1 (ENSSVLG00005019034) #28	NFE2L1 (ENSSVLG00005018798) #29	COPZ2 (ENSSVLG00005018641) #30	CDK5RAP3 (ENSSVLG00005018459) #31	PRR15L (ENSSVLG00005018399) #32	PNPO (ENSSVLG00005018295) #33	ENSSVLG00005018218 #34	SP6 (ENSSVLG00005018194) #36	SCRN2 (ENSSVLG00005018077) #37	LRRC46 (ENSSVLG00005018036)	MRPL10 (ENSSVLG00005017985)	OSBPL7 (ENSSVLG00005017757)
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00950000185410	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155029.c.b #22
Common shrew	MODERN SPECIES	5391																HOXB2 (ENSSARG00000008539) #22
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00390000007843	ENSGT00990000209473	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00950000185410	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00390000007843	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00950000185410	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Suina	ANCESTRAL SPECIES		ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Chacoan peccary	MODERN SPECIES	145	IGF2BP1 (ENSCWAG00000022044)	GIP (ENSCWAG00000022046)	SNF8 (ENSCWAG00000022048)	UBE2Z (ENSCWAG00000022050)	ATP5MC1 (ENSCWAG00000022052)	CALCOCO2 (ENSCWAG00000022056) #8	TTLL6 (ENSCWAG00000022059) #11	HOXB13 (ENSCWAG00000022063) #12	HOXB9 (ENSCWAG00000022065) #15	HOXB8 (ENSCWAG00000022066) #16	HOXB7 (ENSCWAG00000022067) #17	HOXB6 (ENSCWAG00000022069) #18	HOXB5 (ENSCWAG00000022071) #19	HOXB4 (ENSCWAG00000022074) #20	HOXB3 (ENSCWAG00000022077)	HOXB2 (ENSCWAG00000022078) #22	HOXB1 (ENSCWAG00000022080) #23	SKAP1 (ENSCWAG00000000046) #24	SNX11 (ENSCWAG00000000070) #27	CBX1 (ENSCWAG00000000121) #28	NFE2L1 (ENSCWAG00000000185) #29	COPZ2 (ENSCWAG00000000341) #30	CDK5RAP3 (ENSCWAG00000000377) #31	PRR15L (ENSCWAG00000000410) #32	PNPO (ENSCWAG00000000427) #33	SP2 (ENSCWAG00000000474) #34	SP6 (ENSCWAG00000000502) #36	SCRN2 (ENSCWAG00000000520) #37	LRRC46 (ENSCWAG00000000570)	MRPL10 (ENSCWAG00000000589)	OSBPL7 (ENSCWAG00000000623)
Pig	MODERN SPECIES	3	IGF2BP1 (ENSSSCG00000023128)	GIP (ENSSSCG00000026330)	SNF8 (ENSSSCG00000021461)	UBE2Z (ENSSSCG00000025638)	ATP5MC1 (ENSSSCG00000017544)	CALCOCO2 (ENSSSCG00000017543) #8	TTLL6 (ENSSSCG00000017542) #11	HOXB13 (ENSSSCG00000017541) #12	HOXB9 (ENSSSCG00000061856) #15	HOXB8 (ENSSSCG00000017537) #16	HOXB7 (ENSSSCG00000017538) #17	HOXB6 (ENSSSCG00000017539) #18	HOXB5 (ENSSSCG00000017540) #19	HOXB4 (ENSSSCG00000017535) #20	HOXB3 (ENSSSCG00000017534)	HOXB2 (ENSSSCG00000017533) #22	HOXB1 (ENSSSCG00000017532) #23	SKAP1 (ENSSSCG00000017527) #24	SNX11 (ENSSSCG00000017528) #27	CBX1 (ENSSSCG00000017529) #28	NFE2L1 (ENSSSCG00000017525) #29	COPZ2 (ENSSSCG00000017526) #30	CDK5RAP3 (ENSSSCG00000017524) #31	PRR15L (ENSSSCG00000054179) #32	PNPO (ENSSSCG00000032782) #33	SP2 (ENSSSCG00000017516) #34	SP6 (ENSSSCG00000017522) #36	SCRN2 (ENSSSCG00000017521) #37	LRRC46 (ENSSSCG00000017520)	MRPL10 (ENSSSCG00000017519)	OSBPL7 (ENSSSCG00000017518)
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00390000007843	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00950000185410	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Camelidae	ANCESTRAL SPECIES	60	ENSGT00390000005121	ENSGT00390000007843	ENSGT00990000209473	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.a.a ##28	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00950000185410	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Arabian camel	MODERN SPECIES	7	IGF2BP1 (ENSCDRG00005016778)	GIP (ENSCDRG00005016991)	ENSCDRG00005017040	ENSCDRG00005017061	UBE2Z (ENSCDRG00005017075)	ENSCDRG00005017142	CALCOCO2 (ENSCDRG00005017213) #8	TTLL6 (ENSCDRG00005017585) #11	HOXB13 (ENSCDRG00005017741) #12	HOXB9 (ENSCDRG00005017862) #15	HOXB7 (ENSCDRG00005018007) #17	HOXB6 (ENSCDRG00005018029) #18	HOXB5 (ENSCDRG00005018055) #19	HOXB4 (ENSCDRG00005018079) #20	HOXB3 (ENSCDRG00005018104)	HOXB2 (ENSCDRG00005018121) #22	HOXB1 (ENSCDRG00005018147) #23	SKAP1 (ENSCDRG00005018166) #24	SNX11 (ENSCDRG00005018232) #27	CBX1 (ENSCDRG00005018330) ##28	NFE2L1 (ENSCDRG00005018357) #29	ENSCDRG00005018515	COPZ2 (ENSCDRG00005018538) #30	CDK5RAP3 (ENSCDRG00005018564) #31	PRR15L (ENSCDRG00005018636) #32	SP2 (ENSCDRG00005018756) #34	SP6 (ENSCDRG00005018791) #36	SCRN2 (ENSCDRG00005018805) #37	LRRC46 (ENSCDRG00005018865)	MRPL10 (ENSCDRG00005018906)	OSBPL7 (ENSCDRG00005018943)
Alpaca	MODERN SPECIES	3027																HOXB2 (ENSVPAG00000010121) #22	SKAP1 (ENSVPAG00000010119) #24	CBX1 (ENSVPAG00000010117) #28	NFE2L1 (ENSVPAG00000010116) #29
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00390000007843	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00950000185410	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Cetacea	ANCESTRAL SPECIES	5	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.g	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.g	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.g	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Dolphin	MODERN SPECIES	4465									HOXB9 (ENSTTRG00000012262) #15	HOXB8 (ENSTTRG00000012260) #16	ENSTTRG00000012257	HOXB6 (ENSTTRG00000012252) #18	HOXB5 (ENSTTRG00000012251) #19	HOXB4 (ENSTTRG00000012249) #20	HOXB3 (ENSTTRG00000012246)	HOXB2 (ENSTTRG00000012244) #22	HOXB1 (ENSTTRG00000012240) #23
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.g	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.g	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Beluga whale	MODERN SPECIES	26	IGF2BP1 (ENSDLEG00000004887)	GIP (ENSDLEG00000004882)	SNF8 (ENSDLEG00000004876)	UBE2Z (ENSDLEG00000004871)	ATP5G1 (ENSDLEG00000004867)	CALCOCO2 (ENSDLEG00000004861) #8	TTLL6 (ENSDLEG00000004850) #11	HOXB13 (ENSDLEG00000004844) #12	HOXB9 (ENSDLEG00000004838) #15	HOXB8 (ENSDLEG00000004837) #16	HOXB7 (ENSDLEG00000004834) #17	HOXB6 (ENSDLEG00000004829) #18	HOXB5 (ENSDLEG00000004826) #19	HOXB4 (ENSDLEG00000004820) #20	HOXB3 (ENSDLEG00000004817)	HOXB2 (ENSDLEG00000004813) #22	HOXB1 (ENSDLEG00000004807) #23	SKAP1 (ENSDLEG00000004779) #24	SNX11 (ENSDLEG00000004765) #27	CBX1 (ENSDLEG00000004754) ##28	NFE2L1 (ENSDLEG00000004744) #29	ENSDLEG00000004734	COPZ2 (ENSDLEG00000004721) #30	CDK5RAP3 (ENSDLEG00000004709) #31	PRR15L (ENSDLEG00000004704) #32	PNPO (ENSDLEG00000004701) #33	SP2 (ENSDLEG00000004697) #34	SP6 (ENSDLEG00000004694) #36	SCRN2 (ENSDLEG00000004688) #37	ENSDLEG00000004684	MRPL10 (ENSDLEG00000004678)
Narwhal	MODERN SPECIES	316	IGF2BP1 (ENSMMNG00015022053)	GIP (ENSMMNG00015022055)	ENSMMNG00015022056	UBE2Z (ENSMMNG00015022057)	ENSMMNG00015022058	CALCOCO2 (ENSMMNG00015022060) #8	TTLL6 (ENSMMNG00015015987) #11	HOXB13 (ENSMMNG00015016080) #12	HOXB9 (ENSMMNG00015016160) #15	HOXB8 (ENSMMNG00015016175) #16	HOXB7 (ENSMMNG00015016197) #17	HOXB6 (ENSMMNG00015016215) #18	HOXB5 (ENSMMNG00015016235) #19	HOXB4 (ENSMMNG00015016252) #20	HOXB3 (ENSMMNG00015016287)	HOXB2 (ENSMMNG00015016324) #22	HOXB1 (ENSMMNG00015016356) #23	SKAP1 (ENSMMNG00015016386) #24	SNX11 (ENSMMNG00015016452) #27	CBX1 (ENSMMNG00015016582) #28	NFE2L1 (ENSMMNG00015016634) #29	COPZ2 (ENSMMNG00015016743) #30	CDK5RAP3 (ENSMMNG00015016820) #31	PRR15L (ENSMMNG00015016868) #32	PNPO (ENSMMNG00015016895) #33	SP2 (ENSMMNG00015016948) #34	SP6 (ENSMMNG00015016969) #36	SCRN2 (ENSMMNG00015016985) #37	LRRC46 (ENSMMNG00015017038)	MRPL10 (ENSMMNG00015017084)	OSBPL7 (ENSMMNG00015017115)
Vaquita	MODERN SPECIES	12	IGF2BP1 (ENSPSNG00000016168)	GIP (ENSPSNG00000016483)	SNF8 (ENSPSNG00000016533)	UBE2Z (ENSPSNG00000016576)	ENSPSNG00000016635	CALCOCO2 (ENSPSNG00000016749) #8	TTLL6 (ENSPSNG00000017015) #11	HOXB13 (ENSPSNG00000017233) #12	HOXB9 (ENSPSNG00000017398) #15	HOXB8 (ENSPSNG00000017436) #16	HOXB7 (ENSPSNG00000017482) #17	HOXB6 (ENSPSNG00000017525) #18	HOXB5 (ENSPSNG00000017559) #19	HOXB4 (ENSPSNG00000017604) #20	HOXB3 (ENSPSNG00000017636)	HOXB2 (ENSPSNG00000017708) #22	HOXB1 (ENSPSNG00000017728) #23	SKAP1 (ENSPSNG00000017760) #24	SNX11 (ENSPSNG00000017889) #27	ENSPSNG00000017984 #28	NFE2L1 (ENSPSNG00000018052) #29	COPZ2 (ENSPSNG00000018262) #30	CDK5RAP3 (ENSPSNG00000018321) #31	PRR15L (ENSPSNG00000018399) #32	PNPO (ENSPSNG00000018423) #33	SP2 (ENSPSNG00000018528) #34	SP6 (ENSPSNG00000018568) #36	SCRN2 (ENSPSNG00000018588) #37	LRRC46 (ENSPSNG00000018676)	ENSPSNG00000018757	OSBPL7 (ENSPSNG00000018799)
Sperm whale	MODERN SPECIES	5	IGF2BP1 (ENSPCTG00005004404)	GIP (ENSPCTG00005004443)	ENSPCTG00005004464	SNF8 (ENSPCTG00005004481)	ATP5MC1 (ENSPCTG00005004516)	CALCOCO2 (ENSPCTG00005004611) #8	TTLL6 (ENSPCTG00005004739) #11	HOXB13 (ENSPCTG00005004788) #12	HOXB9 (ENSPCTG00005004847) #15	HOXB8 (ENSPCTG00005004864) #16	HOXB7 (ENSPCTG00005004882) #17	HOXB6 (ENSPCTG00005004887) #18	HOXB5 (ENSPCTG00005004905) #19	HOXB4 (ENSPCTG00005004920) #20	HOXB3 (ENSPCTG00005004930)	HOXB2 (ENSPCTG00005004951) #22	HOXB1 (ENSPCTG00005004966) #23	SKAP1 (ENSPCTG00005004985) #24	CBX1 (ENSPCTG00005005034) #28	ENSPCTG00005005083 #34	TBX21 (ENSPCTG00005005105)	TBKBP1 (ENSPCTG00005005144)	KPNB1 (ENSPCTG00005005195)	NPEPPS (ENSPCTG00005005245)	GPR179 (ENSPCTG00005005545)	SOCS7 (ENSPCTG00005005634)	ARHGAP23 (ENSPCTG00005005753)	SRCIN1 (ENSPCTG00005005823)	ENSPCTG00005006189	PSMB3 (ENSPCTG00005006224)	PIP4K2B (ENSPCTG00005006258)
Blue whale	MODERN SPECIES	12	GIP (ENSBMSG00010017026)	SNF8 (ENSBMSG00010017067)	UBE2Z (ENSBMSG00010017102)	ATP5MC1 (ENSBMSG00010017142)	ENSBMSG00010017179	CALCOCO2 (ENSBMSG00010017255) #8	TTLL6 (ENSBMSG00010017444) #11	HOXB13 (ENSBMSG00010017547) #12	HOXB9 (ENSBMSG00010017655) #15	HOXB8 (ENSBMSG00010017685) #16	HOXB7 (ENSBMSG00010017724) #17	HOXB6 (ENSBMSG00010017746) #18	HOXB5 (ENSBMSG00010017772) #19	HOXB4 (ENSBMSG00010017814) #20	HOXB3 (ENSBMSG00010017838)	HOXB2 (ENSBMSG00010017860) #22	HOXB1 (ENSBMSG00010017892) #23	SKAP1 (ENSBMSG00010017921) #24	SNX11 (ENSBMSG00010018006) #27	CBX1 (ENSBMSG00010018099) #28	NFE2L1 (ENSBMSG00010018163) #29	COPZ2 (ENSBMSG00010018306) #30	CDK5RAP3 (ENSBMSG00010018481) #31	PRR15L (ENSBMSG00010018513) #32	PNPO (ENSBMSG00010018544) #33	SP2 (ENSBMSG00010018607) #34	SP6 (ENSBMSG00010018628) #36	ENSBMSG00010018650	ENSBMSG00010018673	ENSBMSG00010018688	ENSBMSG00010018708
Pecora	ANCESTRAL SPECIES	1	ENSGT00390000007843	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00950000185410	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Yarkand deer	MODERN SPECIES	28	GIP (ENSCHYG00000004425)	SNF8 (ENSCHYG00000004443)	UBE2Z (ENSCHYG00000004456)	ENSCHYG00000004476	ENSCHYG00000004493	ENSCHYG00000004521 #8	TTLL6 (ENSCHYG00000004571) #11	HOXB13 (ENSCHYG00000004599) #12	HOXB9 (ENSCHYG00000004623) #15	HOXB8 (ENSCHYG00000004637) #16	HOXB7 (ENSCHYG00000004645) #17	HOXB6 (ENSCHYG00000004651) #18	HOXB5 (ENSCHYG00000004658) #19	HOXB4 (ENSCHYG00000004668) #20	HOXB3 (ENSCHYG00000004670)	HOXB2 (ENSCHYG00000004674) #22	HOXB1 (ENSCHYG00000004684) #23	SKAP1 (ENSCHYG00000004692) #24	ENSCHYG00000004720	SNX11 (ENSCHYG00000004737) #27	CBX1 (ENSCHYG00000004750) #28	NFE2L1 (ENSCHYG00000004781) #29	COPZ2 (ENSCHYG00000004829) #30	ENSCHYG00000004851	CDK5RAP3 (ENSCHYG00000000101) #31	PRR15L (ENSCHYG00000000125) #32	PNPO (ENSCHYG00000000157) #33	SP2 (ENSCHYG00000000198) #34	SP6 (ENSCHYG00000000221) #36	SCRN2 (ENSCHYG00000000227) #37	LRRC46 (ENSCHYG00000000251)
Percora_a	ANCESTRAL SPECIES	2	ENSGT00390000007843	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Siberian musk deer	MODERN SPECIES	1210	GIP (ENSMMSG00000024503)	ENSMMSG00000024504	UBE2Z (ENSMMSG00000024505)	ATP5MC1 (ENSMMSG00000024506)	CALCOCO2 (ENSMMSG00000024509) #8	TTLL6 (ENSMMSG00000024514) #11	HOXB13 (ENSMMSG00000024516) #12	HOXB9 (ENSMMSG00000024520) #15	HOXB8 (ENSMMSG00000024522) #16	HOXB7 (ENSMMSG00000024523) #17	HOXB6 (ENSMMSG00000024525) #18	HOXB5 (ENSMMSG00000024526) #19	HOXB4 (ENSMMSG00000024528) #20	ENSMMSG00000024530 #21	HOXB3 (ENSMMSG00000024531)	HOXB2 (ENSMMSG00000024532) #22	HOXB1 (ENSMMSG00000024533) #23	ENSMMSG00000024535	SKAP1 (ENSMMSG00000024536) #24	SNX11 (ENSMMSG00000024538) #27	CBX1 (ENSMMSG00000024540) #28	NFE2L1 (ENSMMSG00000024541) #29	COPZ2 (ENSMMSG00000024546) #30	CDK5RAP3 (ENSMMSG00000024548) #31	PRR15L (ENSMMSG00000024549) #32	PNPO (ENSMMSG00000024550) #33	SP2 (ENSMMSG00000024551) #34	SP6 (ENSMMSG00000018224) #36	SCRN2 (ENSMMSG00000018238) #37	LRRC46 (ENSMMSG00000018351)	MRPL10 (ENSMMSG00000018396)
Bovidae	ANCESTRAL SPECIES	2	ENSGT00390000005121	ENSGT00390000007843	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Caprinae	ANCESTRAL SPECIES	1	ENSGT00390000005121	ENSGT00390000007843.g.a	ENSGT01100000264599	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000154688.b.j	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Rambouillet Sheep	MODERN SPECIES	2	IGF2BP1 (ENSOARG00020022766)	GIP (ENSOARG00020022695)	UBE2Z (ENSOARG00020022664)	ATP5MC1 (ENSOARG00020022590)	CALCOCO2 (ENSOARG00020022295) #8	ENSOARG00020022258 #11	SNF8 (ENSOARG00020022227)	HOXB13 (ENSOARG00020022195) #12	HOXB9 (ENSOARG00020022138) #15	HOXB8 (ENSOARG00020022064) #16	HOXB7 (ENSOARG00020022042) #17	HOXB6 (ENSOARG00020022021) #18	HOXB5 (ENSOARG00020022004) #19	HOXB4 (ENSOARG00020021954) #20	HOXB3 (ENSOARG00020021943)	HOXB2 (ENSOARG00020021907) #22	HOXB1 (ENSOARG00020021886) #23	SKAP1 (ENSOARG00020021817) #24	SNX11 (ENSOARG00020021783) #27	CBX1 (ENSOARG00020021741) #28	NFE2L1 (ENSOARG00020021460) #29	COPZ2 (ENSOARG00020021377) #30	CDK5RAP3 (ENSOARG00020021339) #31	PRR15L (ENSOARG00020021319) #32	PNPO (ENSOARG00020021017) #33	SP2 (ENSOARG00020020972) #34	SP6 (ENSOARG00020020944) #36	SCRN2 (ENSOARG00020020770) #37	LRRC46 (ENSOARG00020020663)	MRPL10 (ENSOARG00020020614)	OSBPL7 (ENSOARG00020020494)
Goat	MODERN SPECIES	10	GIP (ENSCHIG00000010936)	SNF8 (ENSCHIG00000014794)	ENSCHIG00000020962	UBE2Z (ENSCHIG00000003883)	ENSCHIG00000016881	CALCOCO2 (ENSCHIG00000025313) #8	TTLL6 (ENSCHIG00000022654) #11	HOXB13 (ENSCHIG00000026703) #12	HOXB9 (ENSCHIG00000022791) #15	HOXB8 (ENSCHIG00000015504) #16	HOXB7 (ENSCHIG00000017532) #17	HOXB6 (ENSCHIG00000008881) #18	HOXB5 (ENSCHIG00000023147) #19	HOXB4 (ENSCHIG00000025323) #20	HOXB3 (ENSCHIG00000013978)	HOXB2 (ENSCHIG00000025836) #22	HOXB1 (ENSCHIG00000017872) #23	ENSCHIG00000010180	ENSCHIG00000015920 #24	ENSCHIG00000026878 #24	SNX11 (ENSCHIG00000017547) #27	CBX1 (ENSCHIG00000010985) #28	NFE2L1 (ENSCHIG00000015427) #29	COPZ2 (ENSCHIG00000026544) #30	CDK5RAP3 (ENSCHIG00000025420) #31	PRR15L (ENSCHIG00000008261) #32	PNPO (ENSCHIG00000004606) #33	SP2 (ENSCHIG00000018648) #34	SP6 (ENSCHIG00000009897) #36	SCRN2 (ENSCHIG00000026802) #37	LRRC46 (ENSCHIG00000015497)
Bovinae	ANCESTRAL SPECIES		ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
American bison	MODERN SPECIES	3101	B4GALNT2 (ENSBBBG00000021305)	IGF2BP1 (ENSBBBG00000021334)	GIP (ENSBBBG00000021349)	SNF8 (ENSBBBG00000021356)	UBE2Z (ENSBBBG00000021371)	ATP5MC1 (ENSBBBG00000021377)	CALCOCO2 (ENSBBBG00000005726) #8	TTLL6 (ENSBBBG00000021540) #11	HOXB13 (ENSBBBG00000021546) #12	HOXB9 (ENSBBBG00000021558) #15	HOXB7 (ENSBBBG00000021565) #17	HOXB6 (ENSBBBG00000021567) #18	HOXB5 (ENSBBBG00000021577) #19	HOXB4 (ENSBBBG00000021585) #20	HOXB3 (ENSBBBG00000005740)	HOXB2 (ENSBBBG00000021598) #22	HOXB1 (ENSBBBG00000021601) #23	SKAP1 (ENSBBBG00000021634) #24	SNX11 (ENSBBBG00000021652) #27	ENSBBBG00000021675 ##28	NFE2L1 (ENSBBBG00000021740) #29	COPZ2 (ENSBBBG00000021782) #30	CDK5RAP3 (ENSBBBG00000021808) #31	PRR15L (ENSBBBG00000021809) #32	PNPO (ENSBBBG00000021862) #33	SP2 (ENSBBBG00000021914) #34	SP6 (ENSBBBG00000021924) #36	SCRN2 (ENSBBBG00000021958) #37	LRRC46 (ENSBBBG00000021972)	MRPL10 (ENSBBBG00000021983)	OSBPL7 (ENSBBBG00000022056)
Bos	ANCESTRAL SPECIES	1	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000154688.b.k.a	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.i #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590.e.b #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Bos_b	ANCESTRAL SPECIES	15	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000154688.b.k.a	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.i #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590.e.b #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Cow	MODERN SPECIES	10	IGF2BP1 (ENSBTAG00000011736)	GIP (ENSBTAG00000005045)	SNF8 (ENSBTAG00000018803)	UBE2Z (ENSBTAG00000018802)	ATP5MC1 (ENSBTAG00000018339)	CALCOCO2 (ENSBTAG00000007935) #8	TTLL6 (ENSBTAG00000009332) #11	HOXB13 (ENSBTAG00000014663) #12	HOXB9 (ENSBTAG00000054623) #15	HOXB8 (ENSBTAG00000054162) #16	HOXB7 (ENSBTAG00000005546) #17	HOXB6 (ENSBTAG00000050006) #18	HOXB5 (ENSBTAG00000045835) #19	HOXB4 (ENSBTAG00000039599) #20	HOXB3 (ENSBTAG00000021427)	HOXB2 (ENSBTAG00000009979) #22	HOXB1 (ENSBTAG00000007603) #23	SKAP1 (ENSBTAG00000000641) #24	SNX11 (ENSBTAG00000020321) #27	CBX1 (ENSBTAG00000002949) #28	NFE2L1 (ENSBTAG00000013653) #29	COPZ2 (ENSBTAG00000039954) #30	CDK5RAP3 (ENSBTAG00000014202) #31	PRR15L (ENSBTAG00000012249) #32	PNPO (ENSBTAG00000012259) #33	SP2 (ENSBTAG00000013740) #34	SP6 (ENSBTAG00000001825) #36	SCRN2 (ENSBTAG00000001828) #37	LRRC46 (ENSBTAG00000001830)	MRPL10 (ENSBTAG00000001832)	OSBPL7 (ENSBTAG00000013523)
Hybrid Bos Indicus	MODERN SPECIES	10	IGF2BP1 (ENSBIXG00005007917)	GIP (ENSBIXG00005007892)	SNF8 (ENSBIXG00005007866)	UBE2Z (ENSBIXG00005029277)	ENSBIXG00005029305	CALCOCO2 (ENSBIXG00005029366) #8	ENSBIXG00005029447 #11	HOXB13 (ENSBIXG00005029474) #12	HOXB9 (ENSBIXG00005029519) #15	HOXB8 (ENSBIXG00005029530) #16	HOXB7 (ENSBIXG00005029546) #17	HOXB6 (ENSBIXG00005029554) #18	HOXB5 (ENSBIXG00005029559) #19	HOXB4 (ENSBIXG00005029577) #20	HOXB3 (ENSBIXG00005029591)	HOXB2 (ENSBIXG00005029607) #22	HOXB1 (ENSBIXG00005029618) #23	ENSBIXG00005029636	SKAP1 (ENSBIXG00005029657) #24	SNX11 (ENSBIXG00005029679) #27	CBX1 (ENSBIXG00005029691) #28	NFE2L1 (ENSBIXG00005029748) #29	COPZ2 (ENSBIXG00005029862) #30	CDK5RAP3 (ENSBIXG00005029886) #31	PRR15L (ENSBIXG00005029905) #32	PNPO (ENSBIXG00005029918) #33	ENSBIXG00005029934 #34	SP6 (ENSBIXG00005029948) #36	SCRN2 (ENSBIXG00005029976) #37	LRRC46 (ENSBIXG00005030008)	MRPL10 (ENSBIXG00005030023)
Bos_a	ANCESTRAL SPECIES		ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00940000154688.b.k.a	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.i #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590.e.b #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Wild yak	MODERN SPECIES	319	IGF2BP1 (ENSBMUG00000000549)	GIP (ENSBMUG00000000594)	SNF8 (ENSBMUG00000000607)	UBE2Z (ENSBMUG00000000624)	ENSBMUG00000000644	CALCOCO2 (ENSBMUG00000000720) #8	ENSBMUG00000000753 #11	HOXB13 (ENSBMUG00000000770) #12	HOXB9 (ENSBMUG00000000804) #15	HOXB8 (ENSBMUG00000000824) #16	HOXB7 (ENSBMUG00000000832) #17	HOXB6 (ENSBMUG00000000839) #18	HOXB5 (ENSBMUG00000000849) #19	HOXB4 (ENSBMUG00000000867) #20	HOXB3 (ENSBMUG00000000876)	HOXB2 (ENSBMUG00000000885) #22	HOXB1 (ENSBMUG00000000891) #23	ENSBMUG00000000901	SKAP1 (ENSBMUG00000000925) #24	SNX11 (ENSBMUG00000000953) #27	CBX1 (ENSBMUG00000000974) #28	NFE2L1 (ENSBMUG00000001054) #29	COPZ2 (ENSBMUG00000001081) #30	CDK5RAP3 (ENSBMUG00000001110) #31	ENSBMUG00000001125 #32	PNPO (ENSBMUG00000001160) #33	SP2 (ENSBMUG00000001179) #34
Domestic yak	MODERN SPECIES	10	B4GALNT2 (ENSBGRG00000022672)	IGF2BP1 (ENSBGRG00000022442)	GIP (ENSBGRG00000022397)	SNF8 (ENSBGRG00000022296)	UBE2Z (ENSBGRG00000022223)	ENSBGRG00000022156	CALCOCO2 (ENSBGRG00000021810) #8	TTLL6 (ENSBGRG00000021744) #11	HOXB13 (ENSBGRG00000021718) #12	HOXB9 (ENSBGRG00000021683) #15	HOXB8 (ENSBGRG00000021618) #16	HOXB6 (ENSBGRG00000021579) #18	HOXB5 (ENSBGRG00000021555) #19	HOXB4 (ENSBGRG00000021501) #20	HOXB3 (ENSBGRG00000021464)	HOXB2 (ENSBGRG00000021425) #22	HOXB1 (ENSBGRG00000021404) #23	SKAP1 (ENSBGRG00000021202) #24	SNX11 (ENSBGRG00000021141) #27	CBX1 (ENSBGRG00000021062) #28	NFE2L1 (ENSBGRG00000020783) #29	COPZ2 (ENSBGRG00000020574) #30	CDK5RAP3 (ENSBGRG00000020283) #31	ENSBGRG00000020194 #32	PNPO (ENSBGRG00000019898) #33	ENSBGRG00000019774 #34	SP6 (ENSBGRG00000019744) #36	SCRN2 (ENSBGRG00000019672) #37	LRRC46 (ENSBGRG00000019490)	MRPL10 (ENSBGRG00000019422)	OSBPL7 (ENSBGRG00000019260)
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00390000007843	ENSGT00990000209473	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00950000185410	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Carnivora	ANCESTRAL SPECIES	9	ENSGT00390000005121	ENSGT00390000007843	ENSGT00990000209473	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00950000185410	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Caniformia	ANCESTRAL SPECIES	6	ENSGT00390000005121	ENSGT00390000007843	ENSGT00990000209473	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00950000185410	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Canidae	ANCESTRAL SPECIES	2	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.c	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.c	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Dog	MODERN SPECIES	37	IGF2BP1 (ENSCAFG00845010596)	GIP (ENSCAFG00845010532)	SNF8 (ENSCAFG00845010455)	UBE2Z (ENSCAFG00845010395)	ATP5MC1 (ENSCAFG00845010336)	CALCOCO2 (ENSCAFG00845010119) #8	TTLL6 (ENSCAFG00845010017) #11	HOXB13 (ENSCAFG00845009992) #12	HOXB9 (ENSCAFG00845009956) #15	HOXB8 (ENSCAFG00845009931) #16	HOXB7 (ENSCAFG00845009899) #17	HOXB6 (ENSCAFG00845009871) #18	HOXB5 (ENSCAFG00845009832) #19	HOXB4 (ENSCAFG00845017264) #20	HOXB3 (ENSCAFG00845017188)	HOXB2 (ENSCAFG00845017142) #22	HOXB1 (ENSCAFG00845017096) #23	SKAP1 (ENSCAFG00845016959) #24	SNX11 (ENSCAFG00845016720) #27	CBX1 (ENSCAFG00845016596) #28	NFE2L1 (ENSCAFG00845016388) #29	COPZ2 (ENSCAFG00845016156) #30	CDK5RAP3 (ENSCAFG00845016051) #31	ENSCAFG00845016000	PRR15L (ENSCAFG00845015978) #32	PNPO (ENSCAFG00845015876) #33	SP2 (ENSCAFG00845015786) #34	SP6 (ENSCAFG00845015746) #36	SCRN2 (ENSCAFG00845015686) #37	LRRC46 (ENSCAFG00845015603)	MRPL10 (ENSCAFG00845015539)
Dingo	MODERN SPECIES	150	IGF2BP1 (ENSCAFG00020023369)	GIP (ENSCAFG00020023360)	SNF8 (ENSCAFG00020023354)	UBE2Z (ENSCAFG00020023351)	ENSCAFG00020023349	CALCOCO2 (ENSCAFG00020023334) #8	TTLL6 (ENSCAFG00020023324) #11	HOXB13 (ENSCAFG00020023319) #12	HOXB9 (ENSCAFG00020023312) #15	HOXB8 (ENSCAFG00020023306) #16	ENSCAFG00020023303 #17	HOXB6 (ENSCAFG00020023302) #18	HOXB5 (ENSCAFG00020023301) #19	HOXB4 (ENSCAFG00020023297) #20	HOXB3 (ENSCAFG00020023294)	HOXB2 (ENSCAFG00020023293) #22	HOXB1 (ENSCAFG00020023290) #23	SKAP1 (ENSCAFG00020023287) #24	SNX11 (ENSCAFG00020023282) #27	CBX1 (ENSCAFG00020023275) #28	NFE2L1 (ENSCAFG00020023270) #29	COPZ2 (ENSCAFG00020023263) #30	CDK5RAP3 (ENSCAFG00020023258) #31	PRR15L (ENSCAFG00020023256) #32	PNPO (ENSCAFG00020023249) #33	SP2 (ENSCAFG00020023246) #34	SP6 (ENSCAFG00020023243) #36	SCRN2 (ENSCAFG00020023238) #37	LRRC46 (ENSCAFG00020023236)	MRPL10 (ENSCAFG00020023232)	OSBPL7 (ENSCAFG00020023225)
Red fox	MODERN SPECIES	20	IGF2BP1 (ENSVVUG00000003451)	GIP (ENSVVUG00000003440)	SNF8 (ENSVVUG00000003434)	UBE2Z (ENSVVUG00000003424)	ATP5MC1 (ENSVVUG00000003411)	CALCOCO2 (ENSVVUG00000003399) #8	TTLL6 (ENSVVUG00000003393) #11	HOXB13 (ENSVVUG00000003382) #12	HOXB9 (ENSVVUG00000003367) #15	HOXB8 (ENSVVUG00000003366) #16	HOXB7 (ENSVVUG00000003360) #17	HOXB6 (ENSVVUG00000003359) #18	HOXB5 (ENSVVUG00000003354) #19	ENSVVUG00000003340 #20	HOXB3 (ENSVVUG00000003329)	HOXB2 (ENSVVUG00000003328) #22	HOXB1 (ENSVVUG00000003325) #23	SKAP1 (ENSVVUG00000003297) #24	SNX11 (ENSVVUG00000003276) #27	ENSVVUG00000003272 #28	NFE2L1 (ENSVVUG00000003262) #29	COPZ2 (ENSVVUG00000003249) #30	CDK5RAP3 (ENSVVUG00000003227) #31	PRR15L (ENSVVUG00000003218) #32	PNPO (ENSVVUG00000003178) #33	SP2 (ENSVVUG00000003171) #34	SP6 (ENSVVUG00000003167) #36	SCRN2 (ENSVVUG00000003154) #37	LRRC46 (ENSVVUG00000003146)	MRPL10 (ENSVVUG00000003141)	ENSVVUG00000003127
Caniformia_b	ANCESTRAL SPECIES	21	ENSGT00390000005121	ENSGT00390000007843	ENSGT00990000209473	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00950000185410	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Mustelinae	ANCESTRAL SPECIES	2	ENSGT00390000005121	ENSGT00390000007843	ENSGT00990000209473	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00950000185410	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
American mink	MODERN SPECIES	92	GIP (ENSNVIG00000006361)	ENSNVIG00000006352	ENSNVIG00000006339	UBE2Z (ENSNVIG00000006316)	ENSNVIG00000006295	CALCOCO2 (ENSNVIG00000006167) #8	TTLL6 (ENSNVIG00000006132) #11	HOXB13 (ENSNVIG00000006117) #12	HOXB9 (ENSNVIG00000006082) #15	HOXB8 (ENSNVIG00000006066) #16	HOXB7 (ENSNVIG00000006060) #17	HOXB6 (ENSNVIG00000006053) #18	HOXB5 (ENSNVIG00000006049) #19	HOXB4 (ENSNVIG00000006040) #20	HOXB3 (ENSNVIG00000006032)	HOXB2 (ENSNVIG00000006024) #22	HOXB1 (ENSNVIG00000006017) #23	ENSNVIG00000006009	SKAP1 (ENSNVIG00000005974) #24	SNX11 (ENSNVIG00000005959) #27	CBX1 (ENSNVIG00000005946) #28	NFE2L1 (ENSNVIG00000005857) #29	ENSNVIG00000005842	COPZ2 (ENSNVIG00000005837) #30	CDK5RAP3 (ENSNVIG00000005742) #31	PR15L (ENSNVIG00000005731) #32	PNPO (ENSNVIG00000005692) #33	SP2 (ENSNVIG00000005673) #34	SP6 (ENSNVIG00000005667) #36	SCRN2 (ENSNVIG00000005641) #37	LRRC46 (ENSNVIG00000005619)
Ferret	MODERN SPECIES	270	B4GALNT2 (ENSMPUG00000015373)	IGF2BP1 (ENSMPUG00000015358)	GIP (ENSMPUG00000015357)	SNF8 (ENSMPUG00000015356)	UBE2Z (ENSMPUG00000015342)	ENSMPUG00000015341	CALCOCO2 (ENSMPUG00000015338) #8	TTLL6 (ENSMPUG00000015335) #11	HOXB13 (ENSMPUG00000015332) #12	HOXB9 (ENSMPUG00000015330) #15	HOXB8 (ENSMPUG00000015329) #16	HOXB7 (ENSMPUG00000015328) #17	HOXB6 (ENSMPUG00000015322) #18	HOXB5 (ENSMPUG00000015316) #19	HOXB4 (ENSMPUG00000015310) #20	HOXB2 (ENSMPUG00000015309) #22	HOXB1 (ENSMPUG00000015307) #23	SKAP1 (ENSMPUG00000015305) #24	SNX11 (ENSMPUG00000015303) #27	CBX1 (ENSMPUG00000015302) ##28	NFE2L1 (ENSMPUG00000015301) #29	COPZ2 (ENSMPUG00000015292) #30	CDK5RAP3 (ENSMPUG00000015291) #31	PRR15L (ENSMPUG00000020087) #32	PNPO (ENSMPUG00000015290) #33	SP2 (ENSMPUG00000015289) #34	SP6 (ENSMPUG00000020086) #36	SCRN2 (ENSMPUG00000015288) #37	LRRC46 (ENSMPUG00000015287)	MRPL10 (ENSMPUG00000015278)	OSBPL7 (ENSMPUG00000015276)
Ursidae	ANCESTRAL SPECIES	18	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00950000185410	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Ursus	ANCESTRAL SPECIES	67	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00950000185410	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
American black bear	MODERN SPECIES	4290															HOXB3 (ENSUAMG00000008864)	HOXB2 (ENSUAMG00000008866) #22	HOXB1 (ENSUAMG00000008868) #23
Giant Panda	MODERN SPECIES	4	GIP (ENSAMEG00000005081)	SNF8 (ENSAMEG00000005062)	UBE2Z (ENSAMEG00000005049)	ATP5MC1 (ENSAMEG00000005038)	CALCOCO2 (ENSAMEG00000005015) #8	ENSAMEG00000005000 #11	HOXB13 (ENSAMEG00000026873) #12	ENSAMEG00000026258	HOXB9 (ENSAMEG00000024921) #15	ENSAMEG00000004982 #16	HOXB7 (ENSAMEG00000004977) #17	HOXB6 (ENSAMEG00000004971) #18	HOXB5 (ENSAMEG00000004967) #19	HOXB4 (ENSAMEG00000028329) #20	HOXB3 (ENSAMEG00000027375)	HOXB2 (ENSAMEG00000030987) #22	HOXB1 (ENSAMEG00000004935) #23	SKAP1 (ENSAMEG00000004919) #24	SNX11 (ENSAMEG00000004898) #27	CBX1 (ENSAMEG00000004890) #28	NFE2L1 (ENSAMEG00000004881) #29	COPZ2 (ENSAMEG00000004850) #30	ENSAMEG00000030152	CDK5RAP3 (ENSAMEG00000004818) #31	PRR15L (ENSAMEG00000025744) #32	PNPO (ENSAMEG00000004786) #33	SP2 (ENSAMEG00000004772) #34	SCRN2 (ENSAMEG00000004751) #37	LRRC46 (ENSAMEG00000004734)	MRPL10 (ENSAMEG00000004722)	OSBPL7 (ENSAMEG00000004670)
Felidae	ANCESTRAL SPECIES	8	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.f.a	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000013771.p	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00950000185410	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315
Panthera	ANCESTRAL SPECIES	14	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.f.a	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000013771.p	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00950000185410	ENSGT00390000004405.b #30	ENSGT00940000154534.a #32	ENSGT00390000000713 #31	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315
Tiger	MODERN SPECIES	230	ZNF652 (ENSPTIG00000010615)	ABI3 (ENSPTIG00000011177)	GNGT2 (ENSPTIG00000011802)	B4GALNT2 (ENSPTIG00000012803)	IGF2BP1 (ENSPTIG00000013291)	GIP (ENSPTIG00000016604)	SNF8 (ENSPTIG00000017017)	UBE2Z (ENSPTIG00000017872)	ENSPTIG00000018508	CALCOCO2 (ENSPTIG00000020855) #8	TTLL6 (ENSPTIG00000010570) #11	ENSPTIG00000013326 #12	HOXB7 (ENSPTIG00000014471) #17	HOXB5 (ENSPTIG00000014877) #19	HOXB4 (ENSPTIG00000014995) #20	HOXB2 (ENSPTIG00000015306) #22	HOXB1 (ENSPTIG00000015694) #23	SKAP1 (ENSPTIG00000016493) #24	SNX11 (ENSPTIG00000018316) #27	CBX1 (ENSPTIG00000020896) ##28	NFE2L1 (ENSPTIG00000021715) #29	ENSPTIG00000007047	COPZ2 (ENSPTIG00000007508) #30	CDK5RAP3 (ENSPTIG00000009086) #31	PNPO (ENSPTIG00000012157) #33	SP2 (ENSPTIG00000014873) #34	SCRN2 (ENSPTIG00000016232) #37	LRRC46 (ENSPTIG00000018466)	MRPL10 (ENSPTIG00000018968)	ENSPTIG00000019388	TBX21 (ENSPTIG00000001553)
Panthera_a	ANCESTRAL SPECIES	13	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.f.a	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000013771.p	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00940000154534.a #32	ENSGT00390000000713 #31	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
leopard	MODERN SPECIES	67	IGF2BP1 (ENSPPRG00000008067)	GIP (ENSPPRG00000007119)	ENSPPRG00000007008	UBE2Z (ENSPPRG00000005626)	ENSPPRG00000005588	CALCOCO2 (ENSPPRG00000004550) #8	TTLL6 (ENSPPRG00000003004) #11	HOXB13 (ENSPPRG00000001633) #12	HOXB9 (ENSPPRG00000001578) #15	HOXB8 (ENSPPRG00000001156) #16	HOXB7 (ENSPPRG00000000666) #17	HOXB6 (ENSPPRG00000000532) #18	HOXB5 (ENSPPRG00000000333) #19	HOXB4 (ENSPPRG00000000220) #20	HOXB3 (ENSPPRG00000022415)	HOXB2 (ENSPPRG00000020926) #22	HOXB1 (ENSPPRG00000017656) #23	ENSPPRG00000017115	ENSPPRG00000016613	SKAP1 (ENSPPRG00000015336) #24	SNX11 (ENSPPRG00000012061) #27	CBX1 (ENSPPRG00000009475) #28	NFE2L1 (ENSPPRG00000009101) #29	COPZ2 (ENSPPRG00000006801) #30	CDK5RAP3 (ENSPPRG00000006376) #31	PNPO (ENSPPRG00000005037) #33	SP2 (ENSPPRG00000003332) #34	SP6 (ENSPPRG00000016089) #36	SCRN2 (ENSPPRG00000002730) #37	LRRC46 (ENSPPRG00000001915)	MRPL10 (ENSPPRG00000001188)
lion	MODERN SPECIES	14	GIP (ENSPLOG00000021311)	SNF8 (ENSPLOG00000021370)	UBE2Z (ENSPLOG00000021399)	ENSPLOG00000021422	CALCOCO2 (ENSPLOG00000021469) #8	TTLL6 (ENSPLOG00000021506) #11	HOXB13 (ENSPLOG00000021590) #12	ENSPLOG00000021606	HOXB9 (ENSPLOG00000021630) #15	HOXB8 (ENSPLOG00000021645) #16	HOXB7 (ENSPLOG00000021659) #17	HOXB6 (ENSPLOG00000021669) #18	HOXB5 (ENSPLOG00000021683) #19	HOXB4 (ENSPLOG00000021697) #20	HOXB3 (ENSPLOG00000021711)	HOXB2 (ENSPLOG00000021733) #22	HOXB1 (ENSPLOG00000021742) #23	ENSPLOG00000021761	SKAP1 (ENSPLOG00000021790) #24	SNX11 (ENSPLOG00000021872) #27	CBX1 (ENSPLOG00000021907) #28	NFE2L1 (ENSPLOG00000021931) #29	COPZ2 (ENSPLOG00000021972) #30	CDK5RAP3 (ENSPLOG00000022033) #31	PRR15L (ENSPLOG00000022093) #32	SP2 (ENSPLOG00000022101) #34	SP6 (ENSPLOG00000022115) #36	SCRN2 (ENSPLOG00000022130) #37	LRRC46 (ENSPLOG00000005433)	MRPL10 (ENSPLOG00000005459)	OSBPL7 (ENSPLOG00000005563)
Cat	MODERN SPECIES	245	IGF2BP1 (ENSFCAG00000002454)	GIP (ENSFCAG00000008946)	SNF8 (ENSFCAG00000008944)	UBE2Z (ENSFCAG00000045462)	ENSFCAG00000002344	CALCOCO2 (ENSFCAG00000010622) #8	TTLL6 (ENSFCAG00000010617) #11	HOXB13 (ENSFCAG00000002120) #12	HOXB9 (ENSFCAG00000035234) #15	HOXB8 (ENSFCAG00000036979) #16	HOXB7 (ENSFCAG00000002118) #17	HOXB6 (ENSFCAG00000034768) #18	HOXB5 (ENSFCAG00000039068) #19	HOXB4 (ENSFCAG00000051422) #20	HOXB3 (ENSFCAG00000006408)	HOXB2 (ENSFCAG00000045039) #22	HOXB1 (ENSFCAG00000028151) #23	ENSFCAG00000034133	SKAP1 (ENSFCAG00000004784) #24	SNX11 (ENSFCAG00000009371) #27	CBX1 (ENSFCAG00000006056) ##28	NFE2L1 (ENSFCAG00000009369) #29	COPZ2 (ENSFCAG00000034233) #30	CDK5RAP3 (ENSFCAG00000009367) #31	PRR15L (ENSFCAG00000009366) #32	PNPO (ENSFCAG00000001300) #33	SP2 (ENSFCAG00000009365) #34	SP6 (ENSFCAG00000009363) #36	SCRN2 (ENSFCAG00000009362) #37	LRRC46 (ENSFCAG00000045119)	MRPL10 (ENSFCAG00000009360)
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Microchiroptera	ANCESTRAL SPECIES		ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00980000199681 #21	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Greater horseshoe bat	MODERN SPECIES	13	SNF8 (ENSRFEG00010021745)	UBE2Z (ENSRFEG00010021755)	ENSRFEG00010021766	CALCOCO2 (ENSRFEG00010021784) #8	ENSRFEG00010021798	TTLL6 (ENSRFEG00010021801) #11	HOXB13 (ENSRFEG00010021808) #12	HOXB9 (ENSRFEG00010021814) #15	HOXB8 (ENSRFEG00010021818) #16	HOXB7 (ENSRFEG00010021823) #17	HOXB6 (ENSRFEG00010021831) #18	HOXB5 (ENSRFEG00010021836) #19	HOXB4 (ENSRFEG00010021844) #20	ENSRFEG00010021849 #21	HOXB3 (ENSRFEG00010021853)	HOXB2 (ENSRFEG00010021859) #22	HOXB1 (ENSRFEG00010021864) #23	SKAP1 (ENSRFEG00010021866) #24	SNX11 (ENSRFEG00010021879) #27	CBX1 (ENSRFEG00010021893) #28	NFE2L1 (ENSRFEG00010021900) #29	COPZ2 (ENSRFEG00010021918) #30	CDK5RAP3 (ENSRFEG00010021928) #31	PRR15L (ENSRFEG00010021936) #32	PNPO (ENSRFEG00010021942) #33	SP2 (ENSRFEG00010021950) #34	SP6 (ENSRFEG00010021957) #36	SCRN2 (ENSRFEG00010021961) #37	LRRC46 (ENSRFEG00010008197)	MRPL10 (ENSRFEG00010008230)	OSBPL7 (ENSRFEG00010008272)
Microbat	MODERN SPECIES	2739																ENSMLUG00000008433 #22
Megabat	MODERN SPECIES	334							HOXB13 (ENSPVAG00000015531) #12	ENSPVAG00000015530	HOXB8 (ENSPVAG00000015529) #16	HOXB7 (ENSPVAG00000015528) #17	ENSPVAG00000015526	HOXB6 (ENSPVAG00000015525) #18	HOXB5 (ENSPVAG00000015524) #19	HOXB4 (ENSPVAG00000015523) #20	HOXB3 (ENSPVAG00000015522)	ENSPVAG00000015521 #22	HOXB1 (ENSPVAG00000015520) #23	SKAP1 (ENSPVAG00000015519) #24	SNX11 (ENSPVAG00000015518) #27
Equus	ANCESTRAL SPECIES		ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000159720.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Donkey	MODERN SPECIES	4	SNF8 (ENSEASG00005000402)	ENSEASG00005030756	UBE2Z (ENSEASG00005000404)	ENSEASG00005032484	ENSEASG00005026420 #8	CALCOCO2 (ENSEASG00005000430) #8	ENSEASG00005037375 #11	ENSEASG00005000438 #11	HOXB13 (ENSEASG00005025083) #12	HOXB9 (ENSEASG00005000527) #15	HOXB8 (ENSEASG00005024978) #16	HOXB7 (ENSEASG00005000556) #17	HOXB5 (ENSEASG00005000563) #19	HOXB6 (ENSEASG00005000560) #18	HOXB3 (ENSEASG00005000581)	HOXB2 (ENSEASG00005000585) #22	HOXB1 (ENSEASG00005000594) #23	SKAP1 (ENSEASG00005000601) #24	SNX11 (ENSEASG00005000605) #27	CBX1 (ENSEASG00005000607) #28	NFE2L1 (ENSEASG00005000634) #29	COPZ2 (ENSEASG00005000641) #30	CDK5RAP3 (ENSEASG00005000658) #31	PRR15L (ENSEASG00005000660) #32	PNPO (ENSEASG00005028794) #33	SP2 (ENSEASG00005000667) #34	SP6 (ENSEASG00005036407) #36	SCRN2 (ENSEASG00005000671) #37	LRRC46 (ENSEASG00005000676)	MRPL10 (ENSEASG00005027403)	OSBPL7 (ENSEASG00005000733)
Horse	MODERN SPECIES	2	IGF2BP1 (ENSECAG00000009723)	GIP (ENSECAG00000008172)	ENSECAG00000046431	SNF8 (ENSECAG00000022092)	UBE2Z (ENSECAG00000021160)	ATP5MC1 (ENSECAG00000019908)	CALCOCO2 (ENSECAG00000015498) #8	ENSECAG00000059603 #11	TTLL6 (ENSECAG00000014417) #11	HOXB13 (ENSECAG00000013619) #12	HOXB9 (ENSECAG00000036001) #15	HOXB8 (ENSECAG00000034473) #17	HOXB5 (ENSECAG00000012439) #19	HOXB4 (ENSECAG00000028576) #20	HOXB3 (ENSECAG00000002707)	HOXB2 (ENSECAG00000012423) #22	HOXB1 (ENSECAG00000011628) #23	SKAP1 (ENSECAG00000010544) #24	SNX11 (ENSECAG00000008117) #27	CBX1 (ENSECAG00000008048) #28	NFE2L1 (ENSECAG00000007777) #29	COPZ2 (ENSECAG00000024471) #30	CDK5RAP3 (ENSECAG00000018688) #31	PRR15L (ENSECAG00000002658) #32	PNPO (ENSECAG00000014995) #33	SP2 (ENSECAG00000012859) #34	SP6 (ENSECAG00000012853) #36	SCRN2 (ENSECAG00000009826) #37	LRRC46 (ENSECAG00000007543)	OSBPL7 (ENSECAG00000019067)	TBX21 (ENSECAG00000018160)
Atlantogenata	ANCESTRAL SPECIES	1	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Afrotheria	ANCESTRAL SPECIES	2	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Afrotheria_a	ANCESTRAL SPECIES	2	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439
Elephant	MODERN SPECIES	310	UBE2Z (ENSLAFG00000006606)	ATP5MC1 (ENSLAFG00000004537)	CALCOCO2 (ENSLAFG00000016693) #8	ENSLAFG00000027009	TTLL6 (ENSLAFG00000003368) #11	ENSLAFG00000026602	HOXB13 (ENSLAFG00000011262) #12	HOXB9 (ENSLAFG00000013600) #15	HOXB8 (ENSLAFG00000030682) #16	HOXB7 (ENSLAFG00000030637) #17	HOXB6 (ENSLAFG00000013593) #18	HOXB5 (ENSLAFG00000013590) #19	HOXB4 (ENSLAFG00000013588) #20	HOXB3 (ENSLAFG00000030335)	ENSLAFG00000030505	HOXB2 (ENSLAFG00000030161) #22	ENSLAFG00000031610 #23	SKAP1 (ENSLAFG00000018530) #24	SNX11 (ENSLAFG00000018529) #27	CBX1 (ENSLAFG00000018526) #28	NFE2L1 (ENSLAFG00000018523) #29	ENSLAFG00000015209 #30	ENSLAFG00000030284	CDK5RAP3 (ENSLAFG00000000339) #31	PRR15L (ENSLAFG00000015553) #32	PNPO (ENSLAFG00000015550) #33	SP2 (ENSLAFG00000021817) #34	SP6 (ENSLAFG00000010701) #36	SCRN2 (ENSLAFG00000025964) #37	LRRC46 (ENSLAFG00000006826)	MRPL10 (ENSLAFG00000028127)
Hyrax	MODERN SPECIES	9097															HOXB3 (ENSPCAG00000007683)	HOXB2 (ENSPCAG00000007667) #22
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000155029.c.b #22
Armadillo	MODERN SPECIES	231																ENSDNOG00000047374 #22
Marsupialia	ANCESTRAL SPECIES	13	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Marsupialia_b	ANCESTRAL SPECIES	16	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Diprotodontia	ANCESTRAL SPECIES	9	ENSGT00390000006679.b.b	ENSGT00940000160427	ENSGT00390000007843	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Wallaby	MODERN SPECIES	12825																HOXB2 (ENSMEUG00000003516) #22	HOXB1 (ENSMEUG00000003514) #23
Diprotodontia_a	ANCESTRAL SPECIES	11	ENSGT00390000006679.b.b	ENSGT00940000160427	ENSGT00390000007843	ENSGT00940000159091.e	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
koala	MODERN SPECIES	67	GNGT2 (ENSPCIG00000013109)	B4GALNT2 (ENSPCIG00000003606)	IGF2BP1 (ENSPCIG00000013111)	SNF8 (ENSPCIG00000013302)	ENSPCIG00000013305	ATP5MC1 (ENSPCIG00000013306)	CALCOCO2 (ENSPCIG00000010432) #8	TTLL6 (ENSPCIG00000030247) #11	HOXB13 (ENSPCIG00000030249) #12	HOXB9 (ENSPCIG00000030251) #15	HOXB7 (ENSPCIG00000000064) #17	HOXB6 (ENSPCIG00000000076) #18	HOXB5 (ENSPCIG00000031080) #19	HOXB4 (ENSPCIG00000000195) #20	HOXB3 (ENSPCIG00000000217)	HOXB2 (ENSPCIG00000000295) #22	HOXB1 (ENSPCIG00000033449) #23	SKAP1 (ENSPCIG00000000339) #24	SNX11 (ENSPCIG00000000612) #27	CBX1 (ENSPCIG00000000630) #28	NFE2L1 (ENSPCIG00000000720) #29	COPZ2 (ENSPCIG00000000757) #30	CDK5RAP3 (ENSPCIG00000000798) #31	PRR15L (ENSPCIG00000000814) #32	PNPO (ENSPCIG00000000828) #33	ENSPCIG00000000834	SP2 (ENSPCIG00000000843) #34	SP6 (ENSPCIG00000000873) #36	SCRN2 (ENSPCIG00000000883) #37	LRRC46 (ENSPCIG00000000900)	MRPL10 (ENSPCIG00000031062)
Common wonbat	MODERN SPECIES	1037	ABI3 (ENSVURG00010007788)	GNGT2 (ENSVURG00010007781)	B4GALNT2 (ENSVURG00010007761)	IGF2BP1 (ENSVURG00010007702)	SNF8 (ENSVURG00010007691)	ENSVURG00010007663	CALCOCO2 (ENSVURG00010007642) #8	HOXB13 (ENSVURG00010007629) #12	HOXB9 (ENSVURG00010007619) #15	HOXB8 (ENSVURG00010007609) #16	HOXB7 (ENSVURG00010007606) #17	HOXB6 (ENSVURG00010007602) #18	HOXB5 (ENSVURG00010007599) #19	HOXB4 (ENSVURG00010007589) #20	HOXB3 (ENSVURG00010007587)	HOXB2 (ENSVURG00010007579) #22	HOXB1 (ENSVURG00010007572) #23	SKAP1 (ENSVURG00010007559) #24	SNX11 (ENSVURG00010007541) #27	CBX1 (ENSVURG00010007537) #28	NFE2L1 (ENSVURG00010007465) #29	COPZ2 (ENSVURG00010007430) #30	CDK5RAP3 (ENSVURG00010007403) #31	PRR15L (ENSVURG00010007394) #32	PNPO (ENSVURG00010007376) #33	ENSVURG00010007365	SP2 (ENSVURG00010007347) #34	SP6 (ENSVURG00010007336) #36	SCRN2 (ENSVURG00010007326) #37	LRRC46 (ENSVURG00010007320)	MRPL10 (ENSVURG00010007313)
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000014937	ENSSHAG00000014639	IGF2BP1 (ENSSHAG00000014259)	ENSSHAG00000014119	SNF8 (ENSSHAG00000013985)	UBE2Z (ENSSHAG00000020994)	ATP5MC1 (ENSSHAG00000013859)	CALCOCO2 (ENSSHAG00000022264) #8	TTLL6 (ENSSHAG00000013396) #11	HOXB13 (ENSSHAG00000013189) #12	HOXB9 (ENSSHAG00000012684) #15	HOXB8 (ENSSHAG00000023021) #16	HOXB7 (ENSSHAG00000022783) #17	HOXB5 (ENSSHAG00000024100) #19	HOXB3 (ENSSHAG00000031207)	HOXB2 (ENSSHAG00000012232) #22	HOXB1 (ENSSHAG00000012150) #23	ENSSHAG00000029678	SNX11 (ENSSHAG00000029423) #27	CBX1 (ENSSHAG00000023789) #28	NFE2L1 (ENSSHAG00000026195) #29	COPZ2 (ENSSHAG00000023675) #30	CDK5RAP3 (ENSSHAG00000006548) #31	PRR15L (ENSSHAG00000025985) #32	PNPO (ENSSHAG00000023730) #33	ENSSHAG00000005930	SP2 (ENSSHAG00000005633) #34	SP6 (ENSSHAG00000030597) #36	SCRN2 (ENSSHAG00000003868) #37	LRRC46 (ENSSHAG00000003740)	MRPL10 (ENSSHAG00000030224)
Opossum	MODERN SPECIES	1	IGF2BP1 (ENSMODG00000012268)	ENSMODG00000028269	SNF8 (ENSMODG00000012276)	UBE2Z (ENSMODG00000046619)	ENSMODG00000012296	ENSMODG00000029509 #8	ENSMODG00000012306 #8	ENSMODG00000025670 #11	HOXB13 (ENSMODG00000012310) #12	HOXB9 (ENSMODG00000012329) #15	HOXB7 (ENSMODG00000044053) #17	HOXB6 (ENSMODG00000012334) #18	HOXB5 (ENSMODG00000012338) #19	HOXB4 (ENSMODG00000042083) #20	HOXB3 (ENSMODG00000012344)	HOXB2 (ENSMODG00000012347) #22	HOXB1 (ENSMODG00000046816) #23	SKAP1 (ENSMODG00000012360) #24	SNX11 (ENSMODG00000051179) #27	CBX1 (ENSMODG00000012368) #28	NFE2L1 (ENSMODG00000012375) #29	COPZ2 (ENSMODG00000012424) #30	CDK5RAP3 (ENSMODG00000012439) #31	PRR15L (ENSMODG00000024090) #32	PNPO (ENSMODG00000012446) #33	ENSMODG00000050066	SP2 (ENSMODG00000012452) #34	SP6 (ENSMODG00000012454) #36	SCRN2 (ENSMODG00000012467) #37	LRRC46 (ENSMODG00000012473)	MRPL10 (ENSMODG00000038269)
Platypus	MODERN SPECIES	2	B4GALNT2 (ENSOANG00000042946)	IGF2BP1 (ENSOANG00000014859)	SNF8 (ENSOANG00000050758)	UBE2Z (ENSOANG00000042370)	ATP5MC1 (ENSOANG00000049234)	ENSOANG00000021387 #8	ENSOANG00000007312 #11	HOXB13 (ENSOANG00000007689) #12	HOXB9 (ENSOANG00000005338) #15	HOXB8 (ENSOANG00000047281) #16	HOXB7 (ENSOANG00000051269) #17	HOXB6 (ENSOANG00000050952) #18	HOXB5 (ENSOANG00000051056) #19	HOXB4 (ENSOANG00000042426) #20	HOXB3 (ENSOANG00000039840)	HOXB2 (ENSOANG00000041050) #22	HOXB1 (ENSOANG00000010307) #23	ENSOANG00000044458	SKAP1 (ENSOANG00000010840) #24	ENSOANG00000039817 #27	CBX1 (ENSOANG00000049057) #28	NFE2L1 (ENSOANG00000043783) #29	ENSOANG00000048116 #31	PRR15L (ENSOANG00000013452) #32	PNPO (ENSOANG00000013451) #33	ENSOANG00000049621	SP2 (ENSOANG00000050083) #34	SCRN2 (ENSOANG00000001540) #37	ENSOANG00000001541	MRPL10 (ENSOANG00000006797)	OSBPL7 (ENSOANG00000012288)
Sauria	ANCESTRAL SPECIES	26	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Lepidosauria	ANCESTRAL SPECIES	23	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.c.a ##28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Episquamata	ANCESTRAL SPECIES	5	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000165938	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.c.a ##28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Toxicofera	ANCESTRAL SPECIES	4	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000165938	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.c.a ##28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00960000192469	ENSGT00390000000603
Elapidae	ANCESTRAL SPECIES	5	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000165938	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230.g #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.c.a ##28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590.b #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00960000192469	ENSGT00390000000603
Elapidae_a	ANCESTRAL SPECIES	19	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000165938	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230.g #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.c.a ##28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590.b #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00960000192469	ENSGT00390000000603
Acanthophiinae	ANCESTRAL SPECIES	19	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT01100000263641.a	ENSGT00960000191601	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529.g #16	ENSGT00940000161230.g #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.c.a ##28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590.b #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00960000192469	ENSGT00390000000603	ENSGT00940000157439.c
Eastern brown snake	MODERN SPECIES	49	IGF2BP1 (ENSPTXG00000013878)	SNF8 (ENSPTXG00000013881)	UBE2Z (ENSPTXG00000013882)	ATP5MC1 (ENSPTXG00000013884)	ENSPTXG00000013886 #8	ENSPTXG00000013887	ENSPTXG00000013890	HOXB13 (ENSPTXG00000013892) #12	HOXB9 (ENSPTXG00000013894) #15	ENSPTXG00000013896 #16	ENSPTXG00000013897 #17	HOXB6 (ENSPTXG00000013898) #18	HOXB5 (ENSPTXG00000013900) #19	HOXB4 (ENSPTXG00000013902) #20	HOXB3 (ENSPTXG00000013904)	HOXB2 (ENSPTXG00000013905) #22	HOXB1 (ENSPTXG00000013906) #23	ENSPTXG00000013907	SKAP1 (ENSPTXG00000013908) #24	SNX11 (ENSPTXG00000013909) #27	ENSPTXG00000013911 ##28	NFE2L1 (ENSPTXG00000013912) #29	COPZ2 (ENSPTXG00000013913) #30	CDK5RAP3 (ENSPTXG00000013914) #31	PRR15L (ENSPTXG00000013915) #32	PNPO (ENSPTXG00000013916) #33	ENSPTXG00000013917 #34	SP6 (ENSPTXG00000013918) #36	SCRN2 (ENSPTXG00000013919) #37	ENSPTXG00000013920	MRPL10 (ENSPTXG00000013921)
Mainland tiger snake	MODERN SPECIES	29	UBE2Z (ENSNSUG00000007428)	ATP5MC1 (ENSNSUG00000007429)	ENSNSUG00000007431 #8	ENSNSUG00000007433	ENSNSUG00000007436	ENSNSUG00000007438	ENSNSUG00000007439 #11	HOXB13 (ENSNSUG00000007440) #12	HOXB9 (ENSNSUG00000007441) #15	ENSNSUG00000007442 #16	ENSNSUG00000007443 #17	HOXB6 (ENSNSUG00000007444) #18	HOXB5 (ENSNSUG00000007445) #19	HOXB4 (ENSNSUG00000007447) #20	HOXB3 (ENSNSUG00000007448)	HOXB2 (ENSNSUG00000007449) #22	HOXB1 (ENSNSUG00000007450) #23	SKAP1 (ENSNSUG00000007452) #24	SNX11 (ENSNSUG00000007454) #27	ENSNSUG00000007455 ##28	NFE2L1 (ENSNSUG00000007456) #29	COPZ2 (ENSNSUG00000007459) #30	CDK5RAP3 (ENSNSUG00000007503) #31	PRR15L (ENSNSUG00000007504) #32	PNPO (ENSNSUG00000007506) #33	ENSNSUG00000007509 #34	SP6 (ENSNSUG00000007513) #36	SCRN2 (ENSNSUG00000007517) #37	ENSNSUG00000007519	MRPL10 (ENSNSUG00000007520)	OSBPL7 (ENSNSUG00000007592)
Blue-lipped sea krait	MODERN SPECIES	9907									HOXB9 (ENSLLTG00000013388) #15	HOXB8 (ENSLLTG00000013376) #16	HOXB7 (ENSLLTG00000013372) #17	HOXB6 (ENSLLTG00000013367) #18	HOXB5 (ENSLLTG00000013362) #19	HOXB4 (ENSLLTG00000013356) #20	HOXB3 (ENSLLTG00000013351)	HOXB2 (ENSLLTG00000013346) #22	HOXB1 (ENSLLTG00000013341) #23
Indian cobra	MODERN SPECIES	337	IGF2BP1 (ENSNNAG00000009591)	SNF8 (ENSNNAG00000009568)	UBE2Z (ENSNNAG00000009539)	ATP5MC1 (ENSNNAG00000009523)	ENSNNAG00000009498 #8	ENSNNAG00000009486	ENSNNAG00000009471	HOXB13 (ENSNNAG00000009423) #12	HOXB9 (ENSNNAG00000009384) #15	HOXB8 (ENSNNAG00000009361) #16	HOXB7 (ENSNNAG00000009344) #17	HOXB6 (ENSNNAG00000009328) #18	HOXB5 (ENSNNAG00000009308) #19	HOXB4 (ENSNNAG00000009277) #20	HOXB3 (ENSNNAG00000009256)	HOXB2 (ENSNNAG00000009232) #22	HOXB1 (ENSNNAG00000009145) #23	SNX11 (ENSNNAG00000009074) #27	ENSNNAG00000009045 ##28	NFE2L1 (ENSNNAG00000009022) #29	COPZ2 (ENSNNAG00000008924) #30	CDK5RAP3 (ENSNNAG00000008878) #31	PRR15L (ENSNNAG00000008859) #32	PNPO (ENSNNAG00000008837) #33	ENSNNAG00000008826 #34	SP6 (ENSNNAG00000008820) #36	SCRN2 (ENSNNAG00000008774) #37	ENSNNAG00000008753	MRPL10 (ENSNNAG00000008730)	OSBPL7 (ENSNNAG00000008187)	TBX21 (ENSNNAG00000008104)
Lizard	MODERN SPECIES	5	ENSACAG00000006291	SNF8 (ENSACAG00000036858)	UBE2Z (ENSACAG00000006311)	ENSACAG00000042101	ATP5MC1 (ENSACAG00000035288)	ENSACAG00000006352 #8	ENSACAG00000035828	TTLL6 (ENSACAG00000006363) #11	HOXB9 (ENSACAG00000040887) #15	HOXB8 (ENSACAG00000036553) #16	HOXB7 (ENSACAG00000041279) #17	HOXB6 (ENSACAG00000034900) #18	HOXB5 (ENSACAG00000042998) #19	HOXB4 (ENSACAG00000006499) #20	HOXB3 (ENSACAG00000006508)	HOXB2 (ENSACAG00000006521) #22	HOXB1 (ENSACAG00000035547) #23	ENSACAG00000041448	ENSACAG00000034966	SKAP1 (ENSACAG00000006534) #24	SNX11 (ENSACAG00000006556) #27	ENSACAG00000006594 ##28	NFE2L1 (ENSACAG00000006615) #29	COPZ2 (ENSACAG00000006651) #30	CDK5RAP3 (ENSACAG00000006686) #31	PRR15L (ENSACAG00000006762) #32	PNPO (ENSACAG00000006764) #33	SP2 (ENSACAG00000006793) #34	SP6 (ENSACAG00000006831) #36	SCRN2 (ENSACAG00000006837) #37	LRRC46 (ENSACAG00000006887)
Laterata	ANCESTRAL SPECIES	11	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000165938.a	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.c.a ##28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Common wall lizard	MODERN SPECIES	4	SNF8 (ENSPMRG00000013111)	UBE2Z (ENSPMRG00000013116)	ENSPMRG00000013122	ENSPMRG00000013127 #8	ENSPMRG00000013134	ENSPMRG00000013136	ENSPMRG00000013141	TTLL6 (ENSPMRG00000013146) #11	HOXB9 (ENSPMRG00000013158) #15	HOXB8 (ENSPMRG00000013160) #16	HOXB7 (ENSPMRG00000013164) #17	HOXB6 (ENSPMRG00000013165) #18	HOXB5 (ENSPMRG00000013170) #19	HOXB4 (ENSPMRG00000013173) #20	HOXB3 (ENSPMRG00000013178)	HOXB2 (ENSPMRG00000013183) #22	HOXB1 (ENSPMRG00000013189) #23	ENSPMRG00000013192	CBX1 (ENSPMRG00000013202) ##28	SNX11 (ENSPMRG00000013221) #27	NFE2L1 (ENSPMRG00000013246) #29	ENSPMRG00000013258	COPZ2 (ENSPMRG00000013275) #30	CDK5RAP3 (ENSPMRG00000013294) #31	PNPO (ENSPMRG00000013310) #33	ENSPMRG00000013316	SP2 (ENSPMRG00000013320) #34	SP6 (ENSPMRG00000013329) #36	SCRN2 (ENSPMRG00000013336) #37	LRRC46 (ENSPMRG00000013345)	OSBPL7 (ENSPMRG00000013357)
Argentine black and white tegu	MODERN SPECIES	32	SNF8 (ENSSMRG00000021827)	UBE2Z (ENSSMRG00000021828)	ENSSMRG00000021829	CALCOCO2 (ENSSMRG00000021830) #8	ENSSMRG00000021831	ENSSMRG00000021832	ENSSMRG00000021833 #11	HOXB13 (ENSSMRG00000021834) #12	HOXB9 (ENSSMRG00000021835) #15	HOXB8 (ENSSMRG00000021836) #16	HOXB7 (ENSSMRG00000021837) #17	HOXB6 (ENSSMRG00000021838) #18	HOXB5 (ENSSMRG00000021839) #19	HOXB4 (ENSSMRG00000021841) #20	HOXB3 (ENSSMRG00000021842)	HOXB2 (ENSSMRG00000021844) #22	HOXB1 (ENSSMRG00000021845) #23	SKAP1 (ENSSMRG00000021847) #24	SNX11 (ENSSMRG00000021848) #27	CBX1 (ENSSMRG00000021849) ##28	NFE2L1 (ENSSMRG00000021850) #29	COPZ2 (ENSSMRG00000021851) #30	CDK5RAP3 (ENSSMRG00000021852) #31	PRR15L (ENSSMRG00000021853) #32	PNPO (ENSSMRG00000021854) #33	ENSSMRG00000021855	SP2 (ENSSMRG00000021856) #34	SP6 (ENSSMRG00000021857) #36	SCRN2 (ENSSMRG00000021858) #37	LRRC46 (ENSSMRG00000000025)	MRPL10 (ENSSMRG00000000096)
Archelosauria	ANCESTRAL SPECIES	21	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Cryptodira	ANCESTRAL SPECIES	23	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Testudinoidea	ANCESTRAL SPECIES	19	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Emydidae	ANCESTRAL SPECIES	26	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
painted turtle	MODERN SPECIES	2394	IGF2BP1 (ENSCPBG00000027315)	GIP (ENSCPBG00000027322)	SNF8 (ENSCPBG00000027324)	UBE2Z (ENSCPBG00000027326)	ATP5MC1 (ENSCPBG00000027327)	CALCOCO2 (ENSCPBG00000027328) #8	TTLL6 (ENSCPBG00000027332) #11	HOXB13 (ENSCPBG00000027335) #12	HOXB9 (ENSCPBG00000027339) #15	HOXB8 (ENSCPBG00000027340) #16	HOXB7 (ENSCPBG00000027341) #17	HOXB3 (ENSCPBG00000027344)	HOXB6 (ENSCPBG00000027348) #18	HOXB5 (ENSCPBG00000027349) #19	ENSCPBG00000027351	HOXB2 (ENSCPBG00000027352) #22	HOXB1 (ENSCPBG00000027354) #23	SKAP1 (ENSCPBG00000027357) #24	SNX11 (ENSCPBG00000027362) #27	CBX1 (ENSCPBG00000027366) #28	NFE2L1 (ENSCPBG00000027369) #29	COPZ2 (ENSCPBG00000027373) #30	CDK5RAP3 (ENSCPBG00000027376) #31	PRR15L (ENSCPBG00000027380) #32	PNPO (ENSCPBG00000027382) #33	ENSCPBG00000027388	SP2 (ENSCPBG00000027391) #34	SP6 (ENSCPBG00000027395) #36	SCRN2 (ENSCPBG00000027397) #37	LRRC46 (ENSCPBG00000027399)	MRPL10 (ENSCPBG00000027401)
Three-toed box turtle	MODERN SPECIES	91	IGF2BP1 (ENSTMTG00000007859)	GIP (ENSTMTG00000007840)	SNF8 (ENSTMTG00000007821)	UBE2Z (ENSTMTG00000007812)	ATP5MC1 (ENSTMTG00000007797)	CALCOCO2 (ENSTMTG00000007745) #8	ENSTMTG00000007723 #11	HOXB13 (ENSTMTG00000007711) #12	HOXB9 (ENSTMTG00000007702) #15	HOXB8 (ENSTMTG00000007693) #16	HOXB7 (ENSTMTG00000007684) #17	HOXB6 (ENSTMTG00000007672) #18	HOXB5 (ENSTMTG00000007666) #19	HOXB4 (ENSTMTG00000007660) #20	HOXB3 (ENSTMTG00000007653)	HOXB2 (ENSTMTG00000007640) #22	HOXB1 (ENSTMTG00000007622) #23	SKAP1 (ENSTMTG00000007393) #24	SNX11 (ENSTMTG00000007347) #27	CBX1 (ENSTMTG00000007333) #28	NFE2L1 (ENSTMTG00000007320) #29	COPZ2 (ENSTMTG00000007271) #30	CDK5RAP3 (ENSTMTG00000007229) #31	PRR15L (ENSTMTG00000007217) #32	PNPO (ENSTMTG00000007206) #33	ENSTMTG00000007188	SP2 (ENSTMTG00000007171) #34	ENSTMTG00000007161 #36	SCRN2 (ENSTMTG00000007144) #37	ENSTMTG00000007129	MRPL10 (ENSTMTG00000007114)
Testudinidae	ANCESTRAL SPECIES	24	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Goode s thornscrub tortoise	MODERN SPECIES	15	IGF2BP1 (ENSGEVG00005018150)	ENSGEVG00005018109	SNF8 (ENSGEVG00005018088)	UBE2Z (ENSGEVG00005018038)	ATP5MC1 (ENSGEVG00005018012)	CALCOCO2 (ENSGEVG00005017985) #8	ENSGEVG00005017952 #11	HOXB13 (ENSGEVG00005017930) #12	HOXB9 (ENSGEVG00005017896) #15	HOXB8 (ENSGEVG00005017871) #16	HOXB7 (ENSGEVG00005017847) #17	HOXB6 (ENSGEVG00005017822) #18	HOXB5 (ENSGEVG00005017800) #19	HOXB4 (ENSGEVG00005017783) #20	HOXB3 (ENSGEVG00005017763)	HOXB2 (ENSGEVG00005017753) #22	HOXB1 (ENSGEVG00005017735) #23	SKAP1 (ENSGEVG00005017712) #24	SNX11 (ENSGEVG00005017693) #27	CBX1 (ENSGEVG00005017682) #28	NFE2L1 (ENSGEVG00005017658) #29	COPZ2 (ENSGEVG00005017626) #30	CDK5RAP3 (ENSGEVG00005017600) #31	PRR15L (ENSGEVG00005017586) #32	PNPO (ENSGEVG00005017569) #33	ENSGEVG00005017553	SP2 (ENSGEVG00005017526) #34	SCRN2 (ENSGEVG00005017480) #37	LRRC46 (ENSGEVG00005017463)	MRPL10 (ENSGEVG00005017446)	ENSGEVG00005017409
Abingdon island giant tortoise	MODERN SPECIES	1609	IGF2BP1 (ENSCABG00000002771)	GIP (ENSCABG00000002769)	SNF8 (ENSCABG00000002767)	UBE2Z (ENSCABG00000002765)	ATP5MC1 (ENSCABG00000002763)	CALCOCO2 (ENSCABG00000002761) #8	TTLL6 (ENSCABG00000002759) #11	HOXB13 (ENSCABG00000002758) #12	HOXB9 (ENSCABG00000002754) #15	HOXB8 (ENSCABG00000002750) #16	HOXB7 (ENSCABG00000002742) #17	HOXB6 (ENSCABG00000002738) #18	HOXB5 (ENSCABG00000002737) #19	HOXB4 (ENSCABG00000002736) #20	HOXB3 (ENSCABG00000002733)	HOXB2 (ENSCABG00000002731) #22	HOXB1 (ENSCABG00000002728) #23	SKAP1 (ENSCABG00000002721) #24	SNX11 (ENSCABG00000002717) #27	CBX1 (ENSCABG00000002713) #28	NFE2L1 (ENSCABG00000002708) #29	COPZ2 (ENSCABG00000002681) #30	CDK5RAP3 (ENSCABG00000002680) #31	PRR15L (ENSCABG00000002679) #32	PNPO (ENSCABG00000002678) #33	ENSCABG00000002677	SP2 (ENSCABG00000002675) #34	SP6 (ENSCABG00000002674) #36	SCRN2 (ENSCABG00000002671) #37	ENSCABG00000002668	MRPL10 (ENSCABG00000002666)
Archosauria	ANCESTRAL SPECIES	20	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000161434 #11	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Australian saltwater crocodile	MODERN SPECIES	60	GIP (ENSCPRG00005007298)	SNF8 (ENSCPRG00005007296)	UBE2Z (ENSCPRG00005007294)	ATP5MC1 (ENSCPRG00005007292)	ENSCPRG00005007273 #8	TTLL6 (ENSCPRG00005007263) #11	ENSCPRG00005007261	HOXB13 (ENSCPRG00005007259) #12	HOXB9 (ENSCPRG00005007240) #15	HOXB8 (ENSCPRG00005007236) #16	HOXB7 (ENSCPRG00005007234) #17	HOXB6 (ENSCPRG00005007226) #18	HOXB5 (ENSCPRG00005007222) #19	HOXB4 (ENSCPRG00005007218) #20	HOXB3 (ENSCPRG00005007217)	HOXB2 (ENSCPRG00005007216) #22	HOXB1 (ENSCPRG00005007211) #23	SKAP1 (ENSCPRG00005007201) #24	SNX11 (ENSCPRG00005007185) #27	CBX1 (ENSCPRG00005007181) #28	NFE2L1 (ENSCPRG00005007178) #29	COPZ2 (ENSCPRG00005007172) #30	CDK5RAP3 (ENSCPRG00005007163) #31	PRR15L (ENSCPRG00005007160) #32	PNPO (ENSCPRG00005007155) #33	ENSCPRG00005007151	SP2 (ENSCPRG00005007150) #34	SP6 (ENSCPRG00005007147) #36	SCRN2 (ENSCPRG00005007138) #37	LRRC46 (ENSCPRG00005007132)	MRPL10 (ENSCPRG00005007129)
Aves	ANCESTRAL SPECIES	26	ENSGT01100000263525.b.a	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
African ostrich	MODERN SPECIES	625		PHB1 (ENSSCUG00000008422)	ZNF652 (ENSSCUG00000008426)	GNGT2 (ENSSCUG00000008427)	IGF2BP1 (ENSSCUG00000008429)	GIP (ENSSCUG00000008435)	SNF8 (ENSSCUG00000008438)	UBE2Z (ENSSCUG00000008440)	CALCOCO2 (ENSSCUG00000008444) #8	HOXB9 (ENSSCUG00000008450) #15	HOXB8 (ENSSCUG00000008451) #16	HOXB7 (ENSSCUG00000008454) #17	HOXB5 (ENSSCUG00000008457) #19	HOXB4 (ENSSCUG00000008461) #20	HOXB3 (ENSSCUG00000008463)	HOXB2 (ENSSCUG00000008465) #22	HOXB1 (ENSSCUG00000008466) #23	SKAP1 (ENSSCUG00000008467) #24	SNX11 (ENSSCUG00000008468) #27	CBX1 (ENSSCUG00000008469) #28	NFE2L1 (ENSSCUG00000008470) #29	ENSSCUG00000008471 #31	ENSSCUG00000008472 #31	PRR15L (ENSSCUG00000008473) #32	PNPO (ENSSCUG00000008474) #33	SP2 (ENSSCUG00000008476) #34
Neognathae	ANCESTRAL SPECIES	23	ENSGT01100000263525.b.a	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Neognathae_b	ANCESTRAL SPECIES	23	ENSGT01100000263525.b.a	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Neognathae_c	ANCESTRAL SPECIES	26	ENSGT01100000263525.b.a	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Golden eagle	MODERN SPECIES	24	GNGT2 (ENSACCG00020006019)	IGF2BP1 (ENSACCG00020006001)	GIP (ENSACCG00020005975)	SNF8 (ENSACCG00020005957)	UBE2Z (ENSACCG00020005940)	ENSACCG00020005924	CALCOCO2 (ENSACCG00020005903) #8	HOXB13 (ENSACCG00020005876) #12	HOXB9 (ENSACCG00020005856) #15	HOXB8 (ENSACCG00020005840) #16	HOXB7 (ENSACCG00020005829) #17	HOXB6 (ENSACCG00020005822) #18	HOXB5 (ENSACCG00020005810) #19	HOXB4 (ENSACCG00020005789) #20	HOXB3 (ENSACCG00020005780)	HOXB2 (ENSACCG00020005767) #22	HOXB1 (ENSACCG00020005760) #23	ENSACCG00020005744	SKAP1 (ENSACCG00020005684) #24	SNX11 (ENSACCG00020005654) #27	CBX1 (ENSACCG00020005635) #28	NFE2L1 (ENSACCG00020005624) #29	ENSACCG00020005600	CDK5RAP3 (ENSACCG00020005558) #31	PRR15L (ENSACCG00020005531) #32	PNPO (ENSACCG00020005520) #33	ENSACCG00020005504	SP2 (ENSACCG00020005484) #34	SCRN2 (ENSACCG00020005452) #37	LRRC46 (ENSACCG00020005432)	MRPL10 (ENSACCG00020005421)
Kakapo	MODERN SPECIES	12	GNGT2 (ENSSHBG00005014459)	IGF2BP1 (ENSSHBG00005014472)	GIP (ENSSHBG00005014482)	SNF8 (ENSSHBG00005014495)	UBE2Z (ENSSHBG00005014518)	ENSSHBG00005014527	ENSSHBG00005014537 #8	HOXB13 (ENSSHBG00005014551) #12	HOXB9 (ENSSHBG00005014566) #15	HOXB8 (ENSSHBG00005014570) #16	HOXB7 (ENSSHBG00005014576) #17	HOXB5 (ENSSHBG00005014586) #19	HOXB6 (ENSSHBG00005014592) #18	ENSSHBG00005014606	HOXB3 (ENSSHBG00005014612)	HOXB2 (ENSSHBG00005014624) #22	HOXB1 (ENSSHBG00005014632) #23	SKAP1 (ENSSHBG00005014653) #24	ENSSHBG00005014697 #27	CBX1 (ENSSHBG00005014707) #28	NFE2L1 (ENSSHBG00005014718) #29	COPZ2 (ENSSHBG00005014730) #30	JUP (ENSSHBG00005014758)	P3H4 (ENSSHBG00005014770)	FKBP10 (ENSSHBG00005014777)	NT5C3B (ENSSHBG00005014785)	KLHL10 (ENSSHBG00005014792)	KLHL11 (ENSSHBG00005014800)	ACLY (ENSSHBG00005014817)	ODAD4 (ENSSHBG00005014857)	CNP (ENSSHBG00005000727)
Passeriformes	ANCESTRAL SPECIES	29									ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000158988.a.b	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000000713 #31	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00940000172406	ENSGT00940000157439	ENSGT00940000160397	ENSGT00940000153704.B
Passeriformes_d	ANCESTRAL SPECIES	25										ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000158988.a.b	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000000713 #31	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00940000172406	ENSGT00940000157439	ENSGT00940000160397	ENSGT00940000153704.B
Passeriformes_g	ANCESTRAL SPECIES	50										ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000158988.a.b	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000000713 #31	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000172406	ENSGT00940000157439	ENSGT00940000160397	ENSGT00940000153704.B	ENSGT00550000074898
Passeroidea	ANCESTRAL SPECIES	49										ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000158988.a.b	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000000713 #31	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000172406	ENSGT00940000157439	ENSGT00940000160397	ENSGT00940000153704.B	ENSGT00550000074898
Zebra finch	MODERN SPECIES	20	PHB1 (ENSTGUG00000003470)	ZNF652 (ENSTGUG00000003462)	PHOSPHO1 (ENSTGUG00000022673)	ABI3 (ENSTGUG00000027023)	IGF2BP1 (ENSTGUG00000016237)	ATP5MC1 (ENSTGUG00000026753)	UBE2Z (ENSTGUG00000027782)	ENSTGUG00000027404	ENSTGUG00000026217	HOXB9 (ENSTGUG00000003448) #15	HOXB8 (ENSTGUG00000003441) #16	ENSTGUG00000020107 #17	HOXB6 (ENSTGUG00000003435) #18	HOXB5 (ENSTGUG00000003430) #19	ENSTGUG00000021689	HOXB2 (ENSTGUG00000022054) #22	HOXB1 (ENSTGUG00000025694) #23	SKAP1 (ENSTGUG00000029482) #24	ENSTGUG00000026594 #27	NFE2L1 (ENSTGUG00000014715) #29	CDK5RAP3 (ENSTGUG00000016909) #31	PNPO (ENSTGUG00000027633) #33	SP2 (ENSTGUG00000024446) #34	SP6 (ENSTGUG00000027194) #36	SCRN2 (ENSTGUG00000021900) #37	ENSTGUG00000029748	ENSTGUG00000028791	ENSTGUG00000021758	ENSTGUG00000021058	TBKBP1 (ENSTGUG00000026971)	KPNB1 (ENSTGUG00000003387)
Great tit	MODERN SPECIES	283														ENSPMJG00000001410	HOXB3 (ENSPMJG00000001415)	HOXB2 (ENSPMJG00000001429) #22	HOXB1 (ENSPMJG00000001436) #23	ENSPMJG00000001437	SKAP1 (ENSPMJG00000001443) #24
Galloanserae	ANCESTRAL SPECIES	23	ENSGT01100000263525.b.a	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439.i
Anatidae	ANCESTRAL SPECIES	70	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00940000159720	ENSGT00950000183025.a #8	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439.i
Pink-footed goose	MODERN SPECIES	305	GNGT2 (ENSABRG00000021492)	IGF2BP1 (ENSABRG00000000212)	GIP (ENSABRG00000000246)	SNF8 (ENSABRG00000000286)	UBE2Z (ENSABRG00000000335)	ATP5MC1 (ENSABRG00000000359)	CALCOCO2 (ENSABRG00000000383) #8	HOXB13 (ENSABRG00000000421) #12	HOXB9 (ENSABRG00000000456) #15	HOXB8 (ENSABRG00000000461) #16	HOXB7 (ENSABRG00000000473) #17	HOXB6 (ENSABRG00000000480) #18	HOXB5 (ENSABRG00000000485) #19	HOXB4 (ENSABRG00000000495) #20	HOXB3 (ENSABRG00000000506)	HOXB2 (ENSABRG00000000517) #22	HOXB1 (ENSABRG00000000522) #23	SKAP1 (ENSABRG00000000558) #24	SNX11 (ENSABRG00000000576) #27	CBX1 (ENSABRG00000000584) #28	NFE2L1 (ENSABRG00000000594) #29	ENSABRG00000000606 #30	CDK5RAP3 (ENSABRG00000000636) #31	PNPO (ENSABRG00000000676) #33	SP2 (ENSABRG00000001034) #34	SP6 (ENSABRG00000001100) #36	SCRN2 (ENSABRG00000001107) #37	LRRC46 (ENSABRG00000001138)	MRPL10 (ENSABRG00000001154)	ENSABRG00000001168
Duck	MODERN SPECIES	19	ENSAPLG00000022532	GNGT2 (ENSAPLG00000012604)	IGF2BP1 (ENSAPLG00000012620)	GIP (ENSAPLG00000013204)	SNF8 (ENSAPLG00000031118)	ENSAPLG00000013301	ENSAPLG00000013396 #8	HOXB13 (ENSAPLG00000023394) #12	HOXB9 (ENSAPLG00000013604) #15	HOXB8 (ENSAPLG00000013614) #16	HOXB7 (ENSAPLG00000013643) #17	HOXB6 (ENSAPLG00000013649) #18	HOXB5 (ENSAPLG00000013657) #19	HOXB4 (ENSAPLG00000013669) #20	HOXB3 (ENSAPLG00000018688)	HOXB2 (ENSAPLG00000022580) #22	HOXB1 (ENSAPLG00000018179) #23	SKAP1 (ENSAPLG00000007983) #24
Phasianidae	ANCESTRAL SPECIES	21	ENSGT01100000263525.b.a	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439.i	ENSGT00940000160397
Japanese quail	MODERN SPECIES	19	GNGT2 (ENSCJPG00005019355)	IGF2BP1 (ENSCJPG00005019356)	GIP (ENSCJPG00005019357)	SNF8 (ENSCJPG00005019359)	UBE2Z (ENSCJPG00005019360)	ENSCJPG00005019361	ENSCJPG00005019362 #8	HOXB13 (ENSCJPG00005019363) #12	HOXB9 (ENSCJPG00005019365) #15	HOXB8 (ENSCJPG00005019366) #16	HOXB7 (ENSCJPG00005019367) #17	HOXB6 (ENSCJPG00005019368) #18	HOXB5 (ENSCJPG00005019369) #19	HOXB4 (ENSCJPG00005019371) #20	HOXB3 (ENSCJPG00005019372)	HOXB2 (ENSCJPG00005019373) #22	HOXB1 (ENSCJPG00005019374) #23	SKAP1 (ENSCJPG00005019375) #24	SNX11 (ENSCJPG00005019376) #27	CBX1 (ENSCJPG00005019377) #28	NFE2L1 (ENSCJPG00005019378) #29	CDK5RAP3 (ENSCJPG00005019379) #31	PRR15L (ENSCJPG00005019386) #32	SP2 (ENSCJPG00005019387) #34	SP6 (ENSCJPG00005019388) #36	SCRN2 (ENSCJPG00005019389) #37	LRRC46 (ENSCJPG00005019390)	MRPL10 (ENSCJPG00005019391)	TBX21 (ENSCJPG00005019401)	KPNB1 (ENSCJPG00005000892)	NPEPPS (ENSCJPG00005000955)
Phasianidae_b	ANCESTRAL SPECIES	21	ENSGT01100000263525.b.a	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.cb	ENSGT00940000159091	ENSGT00940000154298.a.b	ENSGT00950000183025.a #8	ENSGT00940000159029 #12	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152.d #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603	ENSGT00940000157439.i	ENSGT00940000160397
Turkey	MODERN SPECIES	21	ENSMGAG00000002455	GNGT2 (ENSMGAG00000022172)	IGF2BP1 (ENSMGAG00000002497)	ENSMGAG00000007094	SNF8 (ENSMGAG00000007078)	UBE2Z (ENSMGAG00000007071)	ENSMGAG00000007047 #8	ENSMGAG00000002528 #16	ENSMGAG00000017883 #19	ENSMGAG00000018145 ##29	ENSMGAG00000001269 #29	ENSMGAG00000001238 #28	ENSMGAG00000005549 #27	ENSMGAG00000002604 #24	ENSMGAG00000002567 #23	ENSMGAG00000019576 #22	ENSMGAG00000002541	ENSMGAG00000007152	ENSMGAG00000007146	ENSMGAG00000002914	ENSMGAG00000017567	ENSMGAG00000017244	ENSMGAG00000002870	ENSMGAG00000002864	ENSMGAG00000019329	ENSMGAG00000022574	ENSMGAG00000015993	ENSMGAG00000002822	ENSMGAG00000005490	ENSMGAG00000005512	ENSMGAG00000022275
Chicken	MODERN SPECIES	19	IGF2BP1 (ENSGALG00010024697)	GIP (ENSGALG00010026239)	SNF8 (ENSGALG00010026298)	UBE2Z (ENSGALG00010026856)	ATP5MC1 (ENSGALG00010026305)	ENSGALG00010026334 #8	HOXB13 (ENSGALG00010026052) #12	HOXB9 (ENSGALG00010026782) #15	ENSGALG00010023374 #16	HOXB8 (ENSGALG00010021446) #16	HOXB7 (ENSGALG00010023381) #17	HOXB6 (ENSGALG00010023383) #18	HOXB5 (ENSGALG00010023394) #19	HOXB4 (ENSGALG00010023415) #20	HOXB3 (ENSGALG00010023428)	HOXB2 (ENSGALG00010023438) #22	HOXB1 (ENSGALG00010023454) #23	SKAP1 (ENSGALG00010021479) #24	SNX11 (ENSGALG00010021554) #27	CBX1 (ENSGALG00010021565) #28	NFE2L1 (ENSGALG00010021583) #29	CDK5RAP3 (ENSGALG00010023706) #31	PRR15L (ENSGALG00010023722) #32	PNPO (ENSGALG00010023726) #33	SP2 (ENSGALG00010023730) #34	SP6 (ENSGALG00010023742) #36	SCRN2 (ENSGALG00010023770) #37	LRRC46 (ENSGALG00010023784)	MRPL10 (ENSGALG00010023807)	OSBPL7 (ENSGALG00010023841)	TBX21 (ENSGALG00010023883)
Anura	ANCESTRAL SPECIES	15	ENSGT00940000157106	ENSGT01090000260040.b.a.b	ENSGT00940000158934	ENSGT00940000160902	ENSGT00390000005121	ENSGT00390000007843	ENSGT00940000159091	ENSGT00950000183025.a #8	ENSGT00940000161386 #15	ENSGT00940000161529 #16	ENSGT00940000161230 #17	ENSGT00940000161108 #18	ENSGT00940000158354 #19	ENSGT00940000162072 #20	ENSGT00940000159774	ENSGT00940000155029.c.b #22	ENSGT00940000159503 #23	ENSGT00390000017856.b #24	ENSGT00940000160113 #27	ENSGT00940000154152 #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00640000092844	ENSGT00940000159590 #34	ENSGT00940000161498 #36	ENSGT00390000013474.b.a #37	ENSGT00940000161315	ENSGT00390000000603
Frog	MODERN SPECIES	1	pabpc1l (ENSXETG00000022831)	ywhab (ENSXETG00000022830)	rims4 (ENSXETG00000044345)	ENSXETG00000034484	kcnk15 (ENSXETG00000038181)	gip (ENSXETG00000031431)	snf8 (ENSXETG00000022819)	ube2z (ENSXETG00000043685)	calcoco2 (ENSXETG00000022806) #8	hoxb9 (ENSXETG00000043711) #15	hoxb8 (ENSXETG00000021993) #16	hoxb6 (ENSXETG00000021987) #18	hoxb5 (ENSXETG00000021978) #19	hoxb4 (ENSXETG00000021973) #20	hoxb3 (ENSXETG00000021967)	hoxb2 (ENSXETG00000027353) #22	hoxb1 (ENSXETG00000049208) #23	skap1 (ENSXETG00000027357) #24	snx11 (ENSXETG00000038807) #27	cbx1 (ENSXETG00000021962) #28	nfe2l1 (ENSXETG00000021958) #29	copz2 (ENSXETG00000021957) #30	prr15l (ENSXETG00000032726) #32	cdk5rap3 (ENSXETG00000027359) #31	XB5788060 [provisional] (ENSXETG00000027360)	sp2 (ENSXETG00000021952) #34	ENSXETG00000043506	sp6 (ENSXETG00000048156) #36	scrn2 (ENSXETG00000021947) #37	lrrc46 (ENSXETG00000045741)	tbx21 (ENSXETG00000041059)
Leishan spiny toad	MODERN SPECIES	3	PABPC1L (ENSLLEG00000024384)	YWHAB (ENSLLEG00000024333)	RIMS4 (ENSLLEG00000024242)	KCNK15 (ENSLLEG00000024208)	ENSLLEG00000024142	SNF8 (ENSLLEG00000023829)	UBE2Z (ENSLLEG00000023729)	ENSLLEG00000023455 #8	HOXB9 (ENSLLEG00000023395) #15	HOXB8 (ENSLLEG00000023318) #16	HOXB7 (ENSLLEG00000023272) #17	HOXB6 (ENSLLEG00000023245) #18	HOXB5 (ENSLLEG00000023222) #19	ENSLLEG00000023190	HOXB3 (ENSLLEG00000023143)	HOXB2 (ENSLLEG00000023108) #22	HOXB1 (ENSLLEG00000023048) #23	SKAP1 (ENSLLEG00000022705) #24	SNX11 (ENSLLEG00000022564) #27	CBX1 (ENSLLEG00000022470) #28	NFE2L1 (ENSLLEG00000022364) #29	COPZ2 (ENSLLEG00000022282) #30	CDK5RAP3 (ENSLLEG00000022067) #31	PRR15L (ENSLLEG00000022006) #32	PNPO (ENSLLEG00000021591) #33	ENSLLEG00000021466	SP2 (ENSLLEG00000021414) #34	ENSLLEG00000021350	SP6 (ENSLLEG00000021323) #36	SCRN2 (ENSLLEG00000021262) #37	ENSLLEG00000024888
Coelacanth	MODERN SPECIES	278	igf2bp1 (ENSLACG00000016755)	SNF8 (ENSLACG00000016411)	UBE2Z (ENSLACG00000016325)	ATP5MC1 (ENSLACG00000016305)	ENSLACG00000016150 #8	TTLL6 (ENSLACG00000015912) #11	ENSLACG00000015759	HOXB13 (ENSLACG00000015543) #12	hoxb10a (ENSLACG00000015207)	HOXB9 (ENSLACG00000015129) #15	HOXB8 (ENSLACG00000015099) #16	HOXB7 (ENSLACG00000015078) #17	HOXB6 (ENSLACG00000014999) #18	ENSLACG00000014942	HOXB3 (ENSLACG00000014824)	HOXB2 (ENSLACG00000014790) #22	HOXB1 (ENSLACG00000014698) #23	SNX11 (ENSLACG00000011068) #27	CBX1 (ENSLACG00000010753) #28	NFE2L1 (ENSLACG00000009960) #29	COPZ2 (ENSLACG00000009416) #30	CDK5RAP3 (ENSLACG00000007698) #31	ENSLACG00000007611	ENSLACG00000007610	PRR15L (ENSLACG00000007448) #32	PNPO (ENSLACG00000007066) #33	SP2 (ENSLACG00000006434) #34	SP6 (ENSLACG00000004875) #36	SCRN2 (ENSLACG00000004181) #37	CHCHD10 (ENSLACG00000001878)	aspdh (ENSLACG00000001117)