Vertebrata ANCESTRAL SPECIES ENSGT00940000155285 #22 Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 602 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 Euteleostomi ANCESTRAL SPECIES 242 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00940000164859 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000165526 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 Sarcopterygii ANCESTRAL SPECIES 224 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00940000164859 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000165526 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000177637 Tetrapoda ANCESTRAL SPECIES 1 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00910000144630.a.f ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000165526 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000177637 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Amniota ANCESTRAL SPECIES 3 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000165526 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000177637 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Mammalia ANCESTRAL SPECIES 3 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000177637 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Theria ANCESTRAL SPECIES 7 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000177637 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Eutheria ANCESTRAL SPECIES 15 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000177637 ENSGT00940000159300 #37 ENSGT00940000159104 Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES 19 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00940000155285.b.a.b ##22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000177637 ENSGT00940000156215.e.b ##36 Euarchontoglires ANCESTRAL SPECIES 19 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00940000155285.b.a.b ##22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000177637 ENSGT00940000156215.e.b ##36 Primates ANCESTRAL SPECIES 20 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00910000147614 #21 ENSGT00910000147863 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Haplorrhini ANCESTRAL SPECIES 19 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00910000147614 #21 ENSGT00910000147863 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Simiiformes ANCESTRAL SPECIES 20 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Catarrhini ANCESTRAL SPECIES 15 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00500000044955.j.a.a #17 ENSGT00940000159198 #18 ENSGT00910000147017 #19 ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT01000000215309 #26 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Hominoidea ANCESTRAL SPECIES 14 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809.m.a #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00500000044955.j.a.a #17 ENSGT00940000159198 #18 ENSGT00910000147017 #19 ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT01000000215309 #26 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00910000148016 #33 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 Hominidae ANCESTRAL SPECIES 15 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809.m.a #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00500000044955.j.a.a #17 ENSGT00940000159198 #18 ENSGT00910000147017 #19 ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT01000000215309 #26 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00910000148016 #33 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 Homo/Pan/Gorilla group ANCESTRAL SPECIES 13 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272.g #9 ENSGT00390000005809.m.a #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00500000044955.j.a.a #17 ENSGT00940000159198 #18 ENSGT00910000147017 #19 ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b.o #24 ENSGT01000000215309 #26 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00550000076451.b #28 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00910000148016 #33 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 Homo/Pan group ANCESTRAL SPECIES 12 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272.g #9 ENSGT00390000005809.m.a #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00500000044955.j.a.a #17 ENSGT00940000159198 #18 ENSGT00910000147017 #19 ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b.o #24 ENSGT01000000215309 #26 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00550000076451.b #28 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00910000148016 #33 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 Pan ANCESTRAL SPECIES 11 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272.g #9 ENSGT00390000005809.m.a #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00500000044955.j.a.a #17 ENSGT00940000159198 #18 ENSGT00910000147017 #19 ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b.o #24 ENSGT01000000215309 #26 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00550000076451.b #28 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00910000148016 #33 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 Bonobo MODERN SPECIES 21 ENSPPAG00000031017 #7 RNF139 (ENSPPAG00000031040) #8 TATDN1 (ENSPPAG00000032418) #9 NDUFB9 (ENSPPAG00000039525) #10 MTSS1 (ENSPPAG00000028285) #11 ZNF572 (ENSPPAG00000043986) #12 SQLE (ENSPPAG00000044116) #13 WASHC5 (ENSPPAG00000036975) #14 NSMCE2 (ENSPPAG00000042888) #15 TRIB1 (ENSPPAG00000038966) #16 ENSPPAG00000041161 #17 LRATD2 (ENSPPAG00000011295) #18 ENSPPAG00000024316 #19 ENSPPAG00000043086 #20 ENSPPAG00000020968 #21 MYC (ENSPPAG00000026360) #22 GSDMC (ENSPPAG00000038920) #23 CYRIB (ENSPPAG00000042549) #24 ASAP1 (ENSPPAG00000041936) #25 ENSPPAG00000037474 #26 ADCY8 (ENSPPAG00000037493) #27 ENSPPAG00000036283 #28 EFR3A (ENSPPAG00000037366) #29 ENSPPAG00000034651 #30 HHLA1 (ENSPPAG00000039282) #31 KCNQ3 (ENSPPAG00000036770) #32 ENSPPAG00000029369 #33 DNAAF11 (ENSPPAG00000030101) #34 TMEM71 (ENSPPAG00000041087) #35 PHF20L1 (ENSPPAG00000040914) #36 TG (ENSPPAG00000033957) #37 Chimpanzee MODERN SPECIES 21 TMEM65 (ENSPTRG00000020565) #7 RNF139 (ENSPTRG00000020567) #8 TATDN1 (ENSPTRG00000046819) #9 NDUFB9 (ENSPTRG00000020569) #10 MTSS1 (ENSPTRG00000020570) #11 ZNF572 (ENSPTRG00000020571) #12 SQLE (ENSPTRG00000020572) #13 WASHC5 (ENSPTRG00000020573) #14 NSMCE2 (ENSPTRG00000020574) #15 TRIB1 (ENSPTRG00000020576) #16 ENSPTRG00000048629 #17 LRATD2 (ENSPTRG00000043511) #18 ENSPTRG00000052764 #19 POU5F1B (ENSPTRG00000001427) ##20 ENSPTRG00000046851 #21 MYC (ENSPTRG00000020581) #22 GSDMC (ENSPTRG00000020584) #23 CYRIB (ENSPTRG00000020585) #24 ASAP1 (ENSPTRG00000020587) #25 ENSPTRG00000045712 #26 ADCY8 (ENSPTRG00000020589) #27 EFR3A (ENSPTRG00000020591) #29 OC90 (ENSPTRG00000020592) #30 HHLA1 (ENSPTRG00000051216) #31 KCNQ3 (ENSPTRG00000020594) #32 ENSPTRG00000046363 #33 DNAAF11 (ENSPTRG00000020595) #34 TMEM71 (ENSPTRG00000020596) #35 PHF20L1 (ENSPTRG00000048015) #36 TG (ENSPTRG00000020599) #37 SLA (ENSPTRG00000020601) Human MODERN SPECIES 20 FAM91A1 (ENSG00000176853) FER1L6 (ENSG00000214814) TMEM65 (ENSG00000164983) #7 TRMT12 (ENSG00000183665) RNF139 (ENSG00000170881) #8 TATDN1 (ENSG00000147687) #9 NDUFB9 (ENSG00000147684) #10 MTSS1 (ENSG00000170873) #11 ZNF572 (ENSG00000180938) #12 SQLE (ENSG00000104549) #13 WASHC5 (ENSG00000164961) #14 NSMCE2 (ENSG00000156831) #15 TRIB1 (ENSG00000173334) #16 LRATD2 (ENSG00000168672) #18 POU5F1B (ENSG00000212993) ##20 MYC (ENSG00000136997) #22 GSDMC (ENSG00000147697) #23 CYRIB (ENSG00000153310) #24 ASAP1 (ENSG00000153317) #25 ADCY8 (ENSG00000155897) #27 EFR3A (ENSG00000132294) #29 OC90 (ENSG00000253117) #30 ENSG00000258417 HHLA1 (ENSG00000132297) #31 KCNQ3 (ENSG00000184156) #32 DNAAF11 (ENSG00000129295) #34 TMEM71 (ENSG00000165071) #35 PHF20L1 (ENSG00000129292) #36 TG (ENSG00000042832) #37 SLA (ENSG00000155926) CCN4 (ENSG00000104415) Gorilla MODERN SPECIES 21 FAM91A1 (ENSGGOG00000011268) FER1L6 (ENSGGOG00000011502) TMEM65 (ENSGGOG00000041843) #7 RNF139 (ENSGGOG00000000693) #8 TATDN1 (ENSGGOG00000015875) #9 ENSGGOG00000015883 #10 MTSS1 (ENSGGOG00000034997) #11 ZNF572 (ENSGGOG00000006964) #12 SQLE (ENSGGOG00000007317) #13 ENSGGOG00000043611 #14 NSMCE2 (ENSGGOG00000008184) #15 TRIB1 (ENSGGOG00000005304) #16 ENSGGOG00000024602 #17 LRATD2 (ENSGGOG00000042455) #18 ENSGGOG00000039145 #21 MYC (ENSGGOG00000012135) #22 GSDMC (ENSGGOG00000004341) #23 CYRIB (ENSGGOG00000006550) #24 ENSGGOG00000025442 ENSGGOG00000041093 #26 ASAP1 (ENSGGOG00000008718) #25 ADCY8 (ENSGGOG00000015786) #27 ENSGGOG00000041834 #28 EFR3A (ENSGGOG00000024611) #29 OC90 (ENSGGOG00000001073) #30 ENSGGOG00000036405 #31 KCNQ3 (ENSGGOG00000001737) #32 DNAAF11 (ENSGGOG00000000805) #34 TMEM71 (ENSGGOG00000013956) #35 PHF20L1 (ENSGGOG00000022313) #36 TG (ENSGGOG00000005600) #37 Orangutan MODERN SPECIES 21 FAM91A1 (ENSPPYG00000018860) FER1L6 (ENSPPYG00000018861) TMEM65 (ENSPPYG00000018865) #7 TRMT12 (ENSPPYG00000018866) RNF139 (ENSPPYG00000018867) #8 TATDN1 (ENSPPYG00000032347) #9 ENSPPYG00000018869 #10 MTSS1 (ENSPPYG00000018870) #11 ZNF572 (ENSPPYG00000018871) #12 SQLE (ENSPPYG00000018872) #13 WASHC5 (ENSPPYG00000018873) #14 NSMCE2 (ENSPPYG00000018874) #15 TRIB1 (ENSPPYG00000018875) #16 LRATD2 (ENSPPYG00000018876) #18 ENSPPYG00000037779 #21 MYC (ENSPPYG00000018878) #22 GSDMC (ENSPPYG00000018882) #23 CYRIB (ENSPPYG00000018883) #24 ASAP1 (ENSPPYG00000018884) #25 ADCY8 (ENSPPYG00000018885) #27 EFR3A (ENSPPYG00000018886) #29 OC90 (ENSPPYG00000018887) #30 HHLA1 (ENSPPYG00000033263) #31 KCNQ3 (ENSPPYG00000018888) #32 DNAAF11 (ENSPPYG00000018889) #34 TMEM71 (ENSPPYG00000018890) #35 PHF20L1 (ENSPPYG00000018891) #36 TG (ENSPPYG00000018892) #37 SLA (ENSPPYG00000018893) CCN4 (ENSPPYG00000018894) NDRG1 (ENSPPYG00000018895) Gibbon MODERN SPECIES 6 FAM91A1 (ENSNLEG00000005385) FER1L6 (ENSNLEG00000005422) TMEM65 (ENSNLEG00000033274) #7 RNF139 (ENSNLEG00000005465) #8 TATDN1 (ENSNLEG00000005467) #9 ENSNLEG00000027636 ##10 MTSS1 (ENSNLEG00000005496) #11 ENSNLEG00000027218 ZNF572 (ENSNLEG00000005528) #12 SQLE (ENSNLEG00000005530) #13 WASHC5 (ENSNLEG00000026804) #14 NSMCE2 (ENSNLEG00000005554) #15 TRIB1 (ENSNLEG00000005564) #16 ENSNLEG00000027471 #17 LRATD2 (ENSNLEG00000029787) #18 MYC (ENSNLEG00000005570) #22 ENSNLEG00000032620 ENSNLEG00000033275 GSDMC (ENSNLEG00000005577) #23 CYRIB (ENSNLEG00000005582) #24 ENSNLEG00000028422 #26 ASAP1 (ENSNLEG00000005606) #25 ADCY8 (ENSNLEG00000005650) #27 EFR3A (ENSNLEG00000005667) #29 OC90 (ENSNLEG00000005732) #30 HHLA1 (ENSNLEG00000034486) #31 KCNQ3 (ENSNLEG00000005743) #32 ENSNLEG00000034650 #33 DNAAF11 (ENSNLEG00000005756) #34 ENSNLEG00000005774 #35 PHF20L1 (ENSNLEG00000005780) #36 Cercopithecidae ANCESTRAL SPECIES 14 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961.b.a #15 ENSGT00950000182986.a.b.b #16 ENSGT00500000044955.j.a.a #17 ENSGT00940000159198 #18 ENSGT00910000147017 #19 ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT01000000215309 #26 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT01020000230401.a.a.b.b.s.a.i ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 Cercopithecinae ANCESTRAL SPECIES 16 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961.b.a #15 ENSGT00950000182986.a.b.b #16 ENSGT00500000044955.j.a.a #17 ENSGT00940000159198 #18 ENSGT00910000147017 #19 ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT01000000215309 #26 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT01020000230401.a.a.b.b.s.a.i ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 Cercopithecinae_a ANCESTRAL SPECIES 15 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961.b.a #15 ENSGT00950000182986.a.b.b #16 ENSGT00500000044955.j.a.a #17 ENSGT00940000159198 #18 ENSGT00910000147017 #19 ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT01000000215309 #26 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT01020000230401.a.a.b.b.s.a.i ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 Macaca ANCESTRAL SPECIES 14 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961.a #15 ENSGT00940000164859 ENSGT00950000182986.a.b.b #16 ENSGT00390000004856.w.a.a.b.b.a.b.b.b ENSGT00940000159198 #18 ENSGT00910000147017 #19 ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT01000000215309 #26 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT01020000230401.a.a.b.b.s.a.i ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 Macaca_a ANCESTRAL SPECIES 16 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961.b.a #15 ENSGT00910000147472.a.b.a ENSGT00950000182986.a.b.b #16 ENSGT00390000004856.w.a.a.b.b.a.b.b.b ENSGT00940000159198 #18 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.a.a.b.b.a.a.a.a.a.b.b ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Crab-eating macaque MODERN SPECIES 18 NDUFB9 (ENSMFAG00000003181) #10 MTSS1 (ENSMFAG00000045642) #11 ZNF572 (ENSMFAG00000031662) #12 SQLE (ENSMFAG00000043907) #13 WASHC5 (ENSMFAG00000031164) #14 NSMCE2 (ENSMFAG00000042438) #15 ENSMFAG00000050212 ENSMFAG00000052447 TRIB1 (ENSMFAG00000002866) #16 ENSMFAG00000063557 ENSMFAG00000026576 LRATD2 (ENSMFAG00000033576) #18 ENSMFAG00000057427 ENSMFAG00000053467 ENSMFAG00000042070 #21 MYC (ENSMFAG00000034186) #22 GSDMC (ENSMFAG00000001675) #23 CYRIB (ENSMFAG00000042222) #24 ASAP1 (ENSMFAG00000044993) #25 ADCY8 (ENSMFAG00000000140) #27 EFR3A (ENSMFAG00000041531) #29 OC90 (ENSMFAG00000037084) #30 HHLA1 (ENSMFAG00000003855) #31 KCNQ3 (ENSMFAG00000000975) #32 DNAAF11 (ENSMFAG00000040429) #34 TMEM71 (ENSMFAG00000046077) #35 PHF20L1 (ENSMFAG00000036945) #36 ENSMFAG00000033080 #37 SLA (ENSMFAG00000003417) CCN4 (ENSMFAG00000033614) NDRG1 (ENSMFAG00000044300) Rhesus MODERN SPECIES 18 MTSS1 (ENSMMUG00000015494) #11 ENSMMUG00000058362 ZNF572 (ENSMMUG00000051484) #12 SQLE (ENSMMUG00000003535) #13 WASHC5 (ENSMMUG00000003538) #14 NSMCE2 (ENSMMUG00000003542) #15 ENSMMUG00000064591 TRIB1 (ENSMMUG00000021759) #16 ENSMMUG00000050894 ENSMMUG00000053718 ENSMMUG00000046772 ENSMMUG00000053247 LRATD2 (ENSMMUG00000047109) #18 ENSMMUG00000050509 ENSMMUG00000040527 #21 MYC (ENSMMUG00000014601) #22 GSDMC (ENSMMUG00000015345) #23 CYRIB (ENSMMUG00000015348) #24 ASAP1 (ENSMMUG00000012145) #25 ADCY8 (ENSMMUG00000010440) #27 ENSMMUG00000052367 EFR3A (ENSMMUG00000012559) #29 OC90 (ENSMMUG00000058106) #30 HHLA1 (ENSMMUG00000012560) #31 KCNQ3 (ENSMMUG00000000892) #32 DNAAF11 (ENSMMUG00000015647) #34 TMEM71 (ENSMMUG00000010189) #35 PHF20L1 (ENSMMUG00000010190) #36 TG (ENSMMUG00000041378) #37 SLA (ENSMMUG00000010197) CCN4 (ENSMMUG00000010199) Pig-tailed macaque MODERN SPECIES 195 LRATD2 (ENSMNEG00000019279) #18 ENSMNEG00000031249 #19 MYC (ENSMNEG00000020890) #22 ENSMNEG00000024744 ENSMNEG00000029666 GSDMC (ENSMNEG00000000045) #23 CYRIB (ENSMNEG00000037280) #24 ENSMNEG00000040595 #26 ASAP1 (ENSMNEG00000032554) #25 ADCY8 (ENSMNEG00000040109) #27 ENSMNEG00000005603 EFR3A (ENSMNEG00000039576) #29 OC90 (ENSMNEG00000033407) #30 HHLA1 (ENSMNEG00000043652) #31 KCNQ3 (ENSMNEG00000043773) #32 DNAAF11 (ENSMNEG00000043558) #34 TMEM71 (ENSMNEG00000033758) #35 PHF20L1 (ENSMNEG00000018127) #36 Cercopithecinae_b ANCESTRAL SPECIES 9 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961.b.a #15 ENSGT00950000182986.a.b.b #16 ENSGT00500000044955.j.a.a #17 ENSGT00940000159198 #18 ENSGT00910000147017 #19 ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT01000000215309 #26 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT01020000230401.a.a.b.b.s.a.i ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159104 ENSGT00940000159300 #37 Cercopithecinae_d ANCESTRAL SPECIES 78 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961.b.a #15 ENSGT00950000182986.a.b.b #16 ENSGT00500000044955.j.a.a #17 ENSGT00940000159198 #18 ENSGT00910000147017 #19 ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT01000000215309 #26 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT01020000230401.a.a.b.b.s.a.i ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159104 ENSGT00940000159300 #37 Drill MODERN SPECIES 646 ENSMLEG00000023901 ENSMLEG00000028077 ADGRB3 (ENSMLEG00000028840) WASHC5 (ENSMLEG00000039974) #14 ENSMLEG00000006698 #15 TRIB1 (ENSMLEG00000002006) #16 ENSMLEG00000040067 ENSMLEG00000038205 #17 LRATD2 (ENSMLEG00000027434) #18 ENSMLEG00000027474 #19 MYC (ENSMLEG00000032954) #22 Sooty mangabey MODERN SPECIES 134 ENSCATG00000036793 #21 MYC (ENSCATG00000037779) #22 ENSCATG00000037069 ENSCATG00000036654 GSDMC (ENSCATG00000042061) #23 CYRIB (ENSCATG00000043371) #24 ENSCATG00000042460 #26 ASAP1 (ENSCATG00000031102) #25 ADCY8 (ENSCATG00000034246) #27 ENSCATG00000011416 EFR3A (ENSCATG00000036244) #29 OC90 (ENSCATG00000030413) #30 HHLA1 (ENSCATG00000040547) #31 KCNQ3 (ENSCATG00000041259) #32 DNAAF11 (ENSCATG00000031522) #34 TMEM71 (ENSCATG00000042448) #35 PHF20L1 (ENSCATG00000040677) #36 Olive baboon MODERN SPECIES 18 RNF139 (ENSPANG00000015394) #8 TATDN1 (ENSPANG00000001330) #9 NDUFB9 (ENSPANG00000006668) #10 MTSS1 (ENSPANG00000020339) #11 ENSPANG00000045310 ZNF572 (ENSPANG00000024290) #12 SQLE (ENSPANG00000005609) #13 WASHC5 (ENSPANG00000008560) #14 NSMCE2 (ENSPANG00000010438) #15 ENSPANG00000051042 TRIB1 (ENSPANG00000039486) #16 ENSPANG00000046685 ENSPANG00000042446 LRATD2 (ENSPANG00000010401) #18 ENSPANG00000035691 #21 MYC (ENSPANG00000010418) #22 ENSPANG00000040141 ENSPANG00000051328 ENSPANG00000038883 CYRIB (ENSPANG00000003127) #24 GSDMC (ENSPANG00000034742) #23 ASAP1 (ENSPANG00000024473) #25 ENSPANG00000037000 ADCY8 (ENSPANG00000021038) #27 ENSPANG00000038436 EFR3A (ENSPANG00000006815) #29 OC90 (ENSPANG00000026025) #30 HHLA1 (ENSPANG00000008812) #31 KCNQ3 (ENSPANG00000002393) #32 DNAAF11 (ENSPANG00000007873) #34 TMEM71 (ENSPANG00000020846) #35 Vervet Monkey MODERN SPECIES 27 KLHL38 (ENSCSAG00000010511) ANXA13 (ENSCSAG00000010507) FAM91A1 (ENSCSAG00000010470) FER1L6 (ENSCSAG00000010361) TRMT12 (ENSCSAG00000018615) RNF139 (ENSCSAG00000010187) #8 TATDN1 (ENSCSAG00000010183) #9 NDUFB9 (ENSCSAG00000010175) #10 MTSS1 (ENSCSAG00000010172) #11 ZNF572 (ENSCSAG00000010162) #12 SQLE (ENSCSAG00000010159) #13 WASHC5 (ENSCSAG00000010152) #14 NSMCE2 (ENSCSAG00000010141) #15 TRIB1 (ENSCSAG00000010133) #16 LRATD2 (ENSCSAG00000018618) #18 MYC (ENSCSAG00000010109) #22 ENSCSAG00000018619 CYRIB (ENSCSAG00000010103) #24 ASAP1 (ENSCSAG00000010095) #25 ADCY8 (ENSCSAG00000010082) #27 EFR3A (ENSCSAG00000010073) #29 OC90 (ENSCSAG00000010023) #30 HHLA1 (ENSCSAG00000010004) #31 KCNQ3 (ENSCSAG00000009982) #32 DNAAF11 (ENSCSAG00000009917) #34 TMEM71 (ENSCSAG00000009905) #35 PHF20L1 (ENSCSAG00000009894) #36 TG (ENSCSAG00000009878) #37 SLA (ENSCSAG00000009852) CCN4 (ENSCSAG00000009848) NDRG1 (ENSCSAG00000009841) Rhinopithecus ANCESTRAL SPECIES 970 ENSGT00940000155285.b.b #22 ENSGT00940000155608.j Black snub-nosed monkey MODERN SPECIES 57 MYC (ENSRBIG00000040458) #22 ENSRBIG00000044746 ENSRBIG00000029870 GSDMC (ENSRBIG00000042153) #23 CYRIB (ENSRBIG00000035667) #24 ENSRBIG00000003492 #26 ASAP1 (ENSRBIG00000035601) #25 ENSRBIG00000038475 Golden snub-nosed monkey MODERN SPECIES 2141 MYC (ENSRROG00000032307) #22 ENSRROG00000039777 Platyrrhini ANCESTRAL SPECIES 17 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809.k #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759.g #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 ENSGT00950000182872.f.a.b Cebidae ANCESTRAL SPECIES 19 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809.k #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759.g #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00910000147614 #21 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 ENSGT00950000182872.f.a.b Marmoset MODERN SPECIES 7 RNF139 (ENSCJAG00000038974) #8 TATDN1 (ENSCJAG00000012826) #9 NDUFB9 (ENSCJAG00000012818) #10 MTSS1 (ENSCJAG00000012784) #11 ZNF572 (ENSCJAG00000060682) #12 SQLE (ENSCJAG00000012744) #13 WASHC5 (ENSCJAG00000012651) #14 ENSCJAG00000082058 NSMCE2 (ENSCJAG00000012645) #15 TRIB1 (ENSCJAG00000061218) #16 ENSCJAG00000074784 LRATD2 (ENSCJAG00000012629) #18 ENSCJAG00000068180 ENSCJAG00000080210 ENSCJAG00000042413 #21 MYC (ENSCJAG00000012620) #22 ENSCJAG00000061719 ENSCJAG00000012609 #23 CYRIB (ENSCJAG00000012575) #24 ASAP1 (ENSCJAG00000012483) #25 ENSCJAG00000073168 ADCY8 (ENSCJAG00000004325) #27 ENSCJAG00000084954 ENSCJAG00000071056 EFR3A (ENSCJAG00000004367) #29 OC90 (ENSCJAG00000004467) #30 HHLA1 (ENSCJAG00000036496) #31 KCNQ3 (ENSCJAG00000004480) #32 DNAAF11 (ENSCJAG00000004490) #34 TMEM71 (ENSCJAG00000004582) #35 PHF20L1 (ENSCJAG00000004502) #36 Cebidae_a ANCESTRAL SPECIES 71 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809.k #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759.g #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 ENSGT00950000182872.f.a.b Bolivian squirrel monkey MODERN SPECIES 100 ENSSBOG00000029037 #7 RNF139 (ENSSBOG00000018889) #8 TATDN1 (ENSSBOG00000023254) #9 NDUFB9 (ENSSBOG00000035468) #10 MTSS1 (ENSSBOG00000034182) #11 ZNF572 (ENSSBOG00000035811) #12 SQLE (ENSSBOG00000034968) #13 WASHC5 (ENSSBOG00000033285) #14 ENSSBOG00000023897 NSMCE2 (ENSSBOG00000034129) #15 ENSSBOG00000033013 TRIB1 (ENSSBOG00000028374) #16 ENSSBOG00000033140 LRATD2 (ENSSBOG00000011855) #18 ENSSBOG00000023594 MYC (ENSSBOG00000025820) #22 ENSSBOG00000027549 CYRIB (ENSSBOG00000028511) #24 ASAP1 (ENSSBOG00000035648) #25 ADCY8 (ENSSBOG00000024320) #27 EFR3A (ENSSBOG00000025497) #29 OC90 (ENSSBOG00000031793) #30 HHLA1 (ENSSBOG00000025546) #31 KCNQ3 (ENSSBOG00000025860) #32 DNAAF11 (ENSSBOG00000023325) #34 TMEM71 (ENSSBOG00000024813) #35 PHF20L1 (ENSSBOG00000028777) #36 SLA (ENSSBOG00000031981) TG (ENSSBOG00000026301) #37 CCN4 (ENSSBOG00000024719) NDRG1 (ENSSBOG00000027318) Capuchin MODERN SPECIES 13 PLEKHH1 (ENSCCAG00000031526) TMEM229B (ENSCCAG00000016856) PLEK2 (ENSCCAG00000029270) EIF2S1 (ENSCCAG00000028622) ATP6V1D (ENSCCAG00000037989) PALS1 (ENSCCAG00000031683) FAM71D (ENSCCAG00000026161) ENSCCAG00000022214 GPHN (ENSCCAG00000020521) MSR1 (ENSCCAG00000034933) ENSCCAG00000037687 LRATD2 (ENSCCAG00000020357) #18 ENSCCAG00000037347 ENSCCAG00000031130 ENSCCAG00000018472 MYC (ENSCCAG00000032999) #22 GSDMC (ENSCCAG00000021127) #23 CYRIB (ENSCCAG00000032744) #24 ASAP1 (ENSCCAG00000022593) #25 ADCY8 (ENSCCAG00000029810) #27 EFR3A (ENSCCAG00000019655) #29 OC90 (ENSCCAG00000031064) #30 HHLA1 (ENSCCAG00000036215) #31 KCNQ3 (ENSCCAG00000028183) #32 DNAAF11 (ENSCCAG00000031017) #34 TMEM71 (ENSCCAG00000028721) #35 PHF20L1 (ENSCCAG00000020490) #36 SLA (ENSCCAG00000031926) TG (ENSCCAG00000028833) #37 CCN4 (ENSCCAG00000025934) NDRG1 (ENSCCAG00000023294) Mas night monkey MODERN SPECIES 729 FER1L6 (ENSANAG00000025928) TMEM65 (ENSANAG00000025471) #7 RNF139 (ENSANAG00000019348) #8 TATDN1 (ENSANAG00000032344) #9 ENSANAG00000029867 #10 MTSS1 (ENSANAG00000020239) #11 ZNF572 (ENSANAG00000019228) #12 ENSANAG00000032384 #13 WASHC5 (ENSANAG00000023378) #14 ENSANAG00000020959 NSMCE2 (ENSANAG00000035224) #15 TRIB1 (ENSANAG00000020092) #16 ENSANAG00000026391 ENSANAG00000028994 LRATD2 (ENSANAG00000019242) #18 MYC (ENSANAG00000024521) #22 Strepsirrhini ANCESTRAL SPECIES 15 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00910000147614 #21 ENSGT00910000147863 ENSGT00940000155285.b.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Lemuriformes ANCESTRAL SPECIES 36 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00910000147614 #21 ENSGT00910000147863 ENSGT00940000155285.b.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Mouse lemur MODERN SPECIES 31 ANXA13 (ENSMICG00000004605) FAM91A1 (ENSMICG00000016546) FER1L6 (ENSMICG00000042130) TMEM65 (ENSMICG00000045848) #7 RNF139 (ENSMICG00000017479) #8 TATDN1 (ENSMICG00000017480) #9 ENSMICG00000017481 #10 MTSS1 (ENSMICG00000030483) #11 ZNF572 (ENSMICG00000017483) #12 SQLE (ENSMICG00000017870) #13 WASHC5 (ENSMICG00000017871) #14 NSMCE2 (ENSMICG00000010064) #15 TRIB1 (ENSMICG00000041712) #16 LRATD2 (ENSMICG00000043304) #18 ENSMICG00000042229 MYC (ENSMICG00000014990) #22 ENSMICG00000027463 ENSMICG00000030779 #24 ASAP1 (ENSMICG00000016241) #25 ADCY8 (ENSMICG00000045984) #27 EFR3A (ENSMICG00000003585) #29 OC90 (ENSMICG00000046279) #30 HHLA1 (ENSMICG00000003609) #31 KCNQ3 (ENSMICG00000003612) #32 DNAAF11 (ENSMICG00000003622) #34 TMEM71 (ENSMICG00000043185) #35 PHF20L1 (ENSMICG00000003634) #36 TG (ENSMICG00000001039) #37 SLA (ENSMICG00000047658) CCN4 (ENSMICG00000001051) NDRG1 (ENSMICG00000001054) Lemuriformes_a ANCESTRAL SPECIES 154 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00910000147614 #21 ENSGT00910000147863 ENSGT00940000155285.b.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 Coquerels sifaka MODERN SPECIES 336 ENSPCOG00000019917 LRATD2 (ENSPCOG00000003738) #18 ENSPCOG00000016920 #21 ENSPCOG00000020117 MYC (ENSPCOG00000010889) #22 CYRIB (ENSPCOG00000024714) #24 ASAP1 (ENSPCOG00000008494) #25 Greater bamboo lemur MODERN SPECIES 922 MYC (ENSPSMG00000005378) #22 CYRIB (ENSPSMG00000005326) #24 ASAP1 (ENSPSMG00000005212) #25 PSMB4 (ENSPSMG00000005066) POGZ (ENSPSMG00000004693) CGN (ENSPSMG00000004302) TUFT1 (ENSPSMG00000004202) SNX27 (ENSPSMG00000003967) CELF3 (ENSPSMG00000003865) RIIAD1 (ENSPSMG00000003769) MRPL9 (ENSPSMG00000003757) OAZ3 (ENSPSMG00000003728) TDRKH (ENSPSMG00000003537) LINGO4 (ENSPSMG00000003452) RORC (ENSPSMG00000003228) C2CD4D (ENSPSMG00000003103) Bushbaby MODERN SPECIES 119 ANXA13 (ENSOGAG00000012786) FAM91A1 (ENSOGAG00000015837) FER1L6 (ENSOGAG00000028552) TMEM65 (ENSOGAG00000029697) #7 TRMT12 (ENSOGAG00000015845) RNF139 (ENSOGAG00000027959) #8 TATDN1 (ENSOGAG00000015849) #9 NDUFB9 (ENSOGAG00000030772) #10 MTSS1 (ENSOGAG00000015853) #11 ZNF572 (ENSOGAG00000015777) #12 SQLE (ENSOGAG00000015778) #13 WASHC5 (ENSOGAG00000015786) #14 NSMCE2 (ENSOGAG00000015798) #15 TRIB1 (ENSOGAG00000008784) #16 LRATD2 (ENSOGAG00000032355) #18 MYC (ENSOGAG00000005372) #22 ENSOGAG00000002105 #23 ENSOGAG00000000369 CYRIB (ENSOGAG00000002107) #24 ASAP1 (ENSOGAG00000002108) #25 ADCY8 (ENSOGAG00000001459) #27 Euarchontoglires_A ANCESTRAL SPECIES 19 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00940000155285.b.a.b ##22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000177637 ENSGT00940000156215.e.b ##36 Glires ANCESTRAL SPECIES 20 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00940000155285.b.a.b ##22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000177637 ENSGT00940000159300 #37 Rodentia ANCESTRAL SPECIES 19 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00940000155285.b.a.b ##22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 Rodentia_A ANCESTRAL SPECIES 18 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00940000155285.b.a.a ##22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Sciuridae ANCESTRAL SPECIES 17 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Marmotini ANCESTRAL SPECIES 10 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 ENSGT00950000182872.f.a.b Marmotini_b ANCESTRAL SPECIES 6 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 ENSGT00950000182872.f.a.b Squirrel MODERN SPECIES 70 ANXA13 (ENSSTOG00000001811) FAM91A1 (ENSSTOG00000001827) FER1L6 (ENSSTOG00000020953) TMEM65 (ENSSTOG00000001422) #7 TRMT12 (ENSSTOG00000030617) RNF139 (ENSSTOG00000029108) #8 TATDN1 (ENSSTOG00000010833) #9 NDUFB9 (ENSSTOG00000021955) #10 MTSS1 (ENSSTOG00000004442) #11 ZNF572 (ENSSTOG00000013236) #12 SQLE (ENSSTOG00000008446) #13 WASHC5 (ENSSTOG00000008463) #14 NSMCE2 (ENSSTOG00000025816) #15 TRIB1 (ENSSTOG00000023120) #16 LRATD2 (ENSSTOG00000025274) #18 MYC (ENSSTOG00000004944) #22 GSDMC (ENSSTOG00000007048) #23 CYRIB (ENSSTOG00000013940) #24 ASAP1 (ENSSTOG00000013952) #25 ADCY8 (ENSSTOG00000002439) #27 EFR3A (ENSSTOG00000002906) #29 OC90 (ENSSTOG00000011108) #30 HHLA1 (ENSSTOG00000011122) #31 KCNQ3 (ENSSTOG00000011130) #32 DNAAF11 (ENSSTOG00000011647) #34 TMEM71 (ENSSTOG00000022474) #35 PHF20L1 (ENSSTOG00000012416) #36 SLA (ENSSTOG00000012453) ENSSTOG00000012423 #37 CCN4 (ENSSTOG00000024729) NDRG1 (ENSSTOG00000027200) Arctic ground squirrel MODERN SPECIES 12 ANXA13 (ENSUPAG00010009130) FAM91A1 (ENSUPAG00010009049) FER1L6 (ENSUPAG00010008962) TMEM65 (ENSUPAG00010008948) #7 TRMT12 (ENSUPAG00010008944) RNF139 (ENSUPAG00010008932) #8 TATDN1 (ENSUPAG00010008902) #9 NDUFB9 (ENSUPAG00010008893) #10 MTSS1 (ENSUPAG00010008839) #11 ENSUPAG00010008820 SQLE (ENSUPAG00010008785) #13 WASHC5 (ENSUPAG00010008692) #14 NSMCE2 (ENSUPAG00010008658) #15 TRIB1 (ENSUPAG00010008649) #16 LRATD2 (ENSUPAG00010008630) #18 MYC (ENSUPAG00010008617) #22 GSDMC (ENSUPAG00010008550) #23 ENSUPAG00010008543 CYRIB (ENSUPAG00010008508) #24 ENSUPAG00010008499 ASAP1 (ENSUPAG00010007317) #25 ENSUPAG00010007308 ENSUPAG00010007296 ADCY8 (ENSUPAG00010007199) #27 EFR3A (ENSUPAG00010007015) #29 OC90 (ENSUPAG00010006953) #30 HHLA1 (ENSUPAG00010006905) #31 KCNQ3 (ENSUPAG00010006871) #32 DNAAF11 (ENSUPAG00010006850) #34 TMEM71 (ENSUPAG00010006832) #35 PHF20L1 (ENSUPAG00010006793) #36 Alpin marmot MODERN SPECIES 18 ANXA13 (ENSMMMG00000001539) FAM91A1 (ENSMMMG00000001596) FER1L6 (ENSMMMG00000001651) ENSMMMG00000001740 RNF139 (ENSMMMG00000001759) #8 TATDN1 (ENSMMMG00000001775) #9 NDUFB9 (ENSMMMG00000001820) #10 MTSS1 (ENSMMMG00000001832) #11 ENSMMMG00000001896 ZNF572 (ENSMMMG00000001899) #12 SQLE (ENSMMMG00000001908) #13 WASHC5 (ENSMMMG00000001964) #14 NSMCE2 (ENSMMMG00000002063) #15 TRIB1 (ENSMMMG00000002104) #16 LRATD2 (ENSMMMG00000002132) #18 MYC (ENSMMMG00000002155) #22 CYRIB (ENSMMMG00000002280) #24 ASAP1 (ENSMMMG00000002349) #25 ADCY8 (ENSMMMG00000003467) #27 ENSMMMG00000003580 EFR3A (ENSMMMG00000003617) #29 OC90 (ENSMMMG00000003713) #30 HHLA1 (ENSMMMG00000003755) #31 KCNQ3 (ENSMMMG00000003818) #32 DNAAF11 (ENSMMMG00000003839) #34 TMEM71 (ENSMMMG00000003878) #35 PHF20L1 (ENSMMMG00000003892) #36 TG (ENSMMMG00000004004) #37 SLA (ENSMMMG00000004139) CCN4 (ENSMMMG00000004263) NDRG1 (ENSMMMG00000004288) Eurasian red squirrel MODERN SPECIES FER1L6 (ENSSVLG00005011345) TMEM65 (ENSSVLG00005011817) #7 TRMT12 (ENSSVLG00005011916) RNF139 (ENSSVLG00005011961) #8 TATDN1 (ENSSVLG00005012019) #9 NDUFB9 (ENSSVLG00005012274) #10 MTSS1 (ENSSVLG00005012405) #11 ZNF572 (ENSSVLG00005012561) #12 SQLE (ENSSVLG00005012626) #13 WASHC5 (ENSSVLG00005012826) #14 NSMCE2 (ENSSVLG00005012930) #15 TRIB1 (ENSSVLG00005013017) #16 LRATD2 (ENSSVLG00005013066) #18 ENSSVLG00005013107 ENSSVLG00005013168 MYC (ENSSVLG00005013254) #22 GSDMC (ENSSVLG00005013325) #23 CYRIB (ENSSVLG00005013445) #24 ASAP1 (ENSSVLG00005013846) #25 ENSSVLG00005014144 ADCY8 (ENSSVLG00005014238) #27 EFR3A (ENSSVLG00005014594) #29 OC90 (ENSSVLG00005014895) #30 HHLA1 (ENSSVLG00005015025) #31 KCNQ3 (ENSSVLG00005015209) #32 DNAAF11 (ENSSVLG00005015634) #34 TMEM71 (ENSSVLG00005015990) #35 PHF20L1 (ENSSVLG00005016179) #36 TG (ENSSVLG00005016366) #37 SLA (ENSSVLG00005016977) CCN4 (ENSSVLG00005017264) Laurasiatheria ANCESTRAL SPECIES 18 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Laurasiatheria_a ANCESTRAL SPECIES 20 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Artiodactyla ANCESTRAL SPECIES 20 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Suina ANCESTRAL SPECIES 26 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Pig MODERN SPECIES 12 FER1L6 (ENSSSCG00000033333) TMEM65 (ENSSSCG00000040731) #7 RNF139 (ENSSSCG00000024412) #8 TATDN1 (ENSSSCG00000030603) #9 NDUFB9 (ENSSSCG00000005976) #10 MTSS1 (ENSSSCG00000005975) #11 ENSSSCG00000005971 #12 ENSSSCG00000056270 SQLE (ENSSSCG00000005970) #13 WASHC5 (ENSSSCG00000005969) #14 NSMCE2 (ENSSSCG00000037755) #15 ENSSSCG00000012120 TRIB1 (ENSSSCG00000038500) #16 ENSSSCG00000052155 LRATD2 (ENSSSCG00000005967) #18 MYC (ENSSSCG00000005965) #22 ENSSSCG00000005962 #23 ENSSSCG00000005961 ##23 ENSSSCG00000005959 #24 ASAP1 (ENSSSCG00000028759) #25 ADCY8 (ENSSSCG00000031717) #27 EFR3A (ENSSSCG00000005955) #29 OC90 (ENSSSCG00000005954) #30 HHLA1 (ENSSSCG00000022257) #31 KCNQ3 (ENSSSCG00000005953) #32 DNAAF11 (ENSSSCG00000005952) #34 TMEM71 (ENSSSCG00000005951) #35 PHF20L1 (ENSSSCG00000005950) #36 SLA (ENSSSCG00000005949) TG (ENSSSCG00000005948) #37 CCN4 (ENSSSCG00000005946) Chacoan peccary MODERN SPECIES 114 FAM91A1 (ENSCWAG00000017020) FER1L6 (ENSCWAG00000017135) TMEM65 (ENSCWAG00000017387) #7 TRMT12 (ENSCWAG00000017443) RNF139 (ENSCWAG00000017451) #8 TATDN1 (ENSCWAG00000017505) #9 NDUFB9 (ENSCWAG00000017673) #10 MTSS1 (ENSCWAG00000017755) #11 ZNF572 (ENSCWAG00000017851) #12 SQLE (ENSCWAG00000017872) #13 WASHC5 (ENSCWAG00000017977) #14 NSMCE2 (ENSCWAG00000018058) #15 TRIB1 (ENSCWAG00000018120) #16 LRATD2 (ENSCWAG00000018208) #18 ENSCWAG00000018220 MYC (ENSCWAG00000018238) #22 ENSCWAG00000018297 #23 CYRIB (ENSCWAG00000018368) #24 ASAP1 (ENSCWAG00000018438) #25 ADCY8 (ENSCWAG00000018744) #27 EFR3A (ENSCWAG00000018922) #29 OC90 (ENSCWAG00000019067) #30 HHLA1 (ENSCWAG00000019148) #31 KCNQ3 (ENSCWAG00000019231) #32 DNAAF11 (ENSCWAG00000019357) #34 TMEM71 (ENSCWAG00000019433) #35 PHF20L1 (ENSCWAG00000019548) #36 TG (ENSCWAG00000019633) #37 SLA (ENSCWAG00000019761) CCN4 (ENSCWAG00000019971) NDRG1 (ENSCWAG00000020006) Artiodactyla_a ANCESTRAL SPECIES 20 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Camelidae ANCESTRAL SPECIES 19 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Arabian camel MODERN SPECIES 17 KLHL38 (ENSCDRG00005003891) ANXA13 (ENSCDRG00005003930) FAM91A1 (ENSCDRG00005004015) FER1L6 (ENSCDRG00005004173) TRMT12 (ENSCDRG00005004316) RNF139 (ENSCDRG00005004328) #8 TATDN1 (ENSCDRG00005004371) #9 NDUFB9 (ENSCDRG00005004502) #10 MTSS1 (ENSCDRG00005004660) #11 ZNF572 (ENSCDRG00005004758) #12 SQLE (ENSCDRG00005004790) #13 WASHC5 (ENSCDRG00005004903) #14 NSMCE2 (ENSCDRG00005005046) #15 TRIB1 (ENSCDRG00005005108) #16 LRATD2 (ENSCDRG00005005133) #18 MYC (ENSCDRG00005005140) #22 ENSCDRG00005005205 #23 CYRIB (ENSCDRG00005005243) #24 ASAP1 (ENSCDRG00005005331) #25 ADCY8 (ENSCDRG00005005520) #27 EFR3A (ENSCDRG00005005704) #29 OC90 (ENSCDRG00005005883) #30 HHLA1 (ENSCDRG00005005943) #31 KCNQ3 (ENSCDRG00005006010) #32 DNAAF11 (ENSCDRG00005006070) #34 TMEM71 (ENSCDRG00005006134) #35 PHF20L1 (ENSCDRG00005006230) #36 TG (ENSCDRG00005006354) #37 SLA (ENSCDRG00005006863) CCN4 (ENSCDRG00005007039) NDRG1 (ENSCDRG00005007109) Alpaca MODERN SPECIES 628 MYC (ENSVPAG00000005895) #22 Artiodactyla_b ANCESTRAL SPECIES 20 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Cetacea ANCESTRAL SPECIES 17 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00390000012916.y.a.d ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Odontoceti ANCESTRAL SPECIES 20 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00390000012916.y.a.d ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Odontoceti_a ANCESTRAL SPECIES 17 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00390000012916.y.a.d ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Odontoceti_b ANCESTRAL SPECIES 19 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00390000012916.y.a.d ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Monodontidae ANCESTRAL SPECIES 20 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000172644 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00390000012916.y.a.d ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Narwhal MODERN SPECIES 300 FER1L6 (ENSMMNG00015009399) TMEM65 (ENSMMNG00015009382) #7 ENSMMNG00015009376 RNF139 (ENSMMNG00015009367) #8 TATDN1 (ENSMMNG00015009343) #9 NDUFB9 (ENSMMNG00015009315) #10 MTSS1 (ENSMMNG00015009268) #11 ZNF572 (ENSMMNG00015009254) #12 SQLE (ENSMMNG00015009242) #13 WASHC5 (ENSMMNG00015009211) #14 NSMCE2 (ENSMMNG00015009199) #15 TRIB1 (ENSMMNG00015004674) #16 ENSMMNG00015004664 LRATD2 (ENSMMNG00015004660) #18 ENSMMNG00015004659 MYC (ENSMMNG00015004654) #22 CYRIB (ENSMMNG00015004641) #24 ASAP1 (ENSMMNG00015004594) #25 ENSMMNG00015004551 ADCY8 (ENSMMNG00015004512) #27 EFR3A (ENSMMNG00015004424) #29 OC90 (ENSMMNG00015004367) #30 HHLA1 (ENSMMNG00015004342) #31 KCNQ3 (ENSMMNG00015004293) #32 DNAAF11 (ENSMMNG00015004267) #34 TMEM71 (ENSMMNG00015004245) #35 PHF20L1 (ENSMMNG00015004210) #36 SLA (ENSMMNG00015004173) TG (ENSMMNG00015004111) #37 CCN4 (ENSMMNG00015004060) NDRG1 (ENSMMNG00015004018) Beluga whale MODERN SPECIES 57 ANXA13 (ENSDLEG00000018180) FAM91A1 (ENSDLEG00000018209) FER1L6 (ENSDLEG00000018301) ENSDLEG00000018683 ENSDLEG00000018692 RNF139 (ENSDLEG00000018696) #8 TATDN1 (ENSDLEG00000018702) #9 NDUFB9 (ENSDLEG00000018709) #10 MTSS1 (ENSDLEG00000018717) #11 ZNF572 (ENSDLEG00000018743) #12 SQLE (ENSDLEG00000018746) #13 WASHC5 (ENSDLEG00000018762) #14 NSMCE2 (ENSDLEG00000018794) #15 TRIB1 (ENSDLEG00000018798) #16 FAM84B (ENSDLEG00000018810) #18 MYC (ENSDLEG00000018814) #22 FAM49B (ENSDLEG00000018823) #24 ASAP1 (ENSDLEG00000018845) #25 ENSDLEG00000018913 ADCY8 (ENSDLEG00000018929) #27 EFR3A (ENSDLEG00000018988) #29 OC90 (ENSDLEG00000019004) #30 HHLA1 (ENSDLEG00000019016) #31 KCNQ3 (ENSDLEG00000019040) #32 LRRC6 (ENSDLEG00000019072) #34 TMEM71 (ENSDLEG00000019088) #35 ENSDLEG00000019106 #36 ENSDLEG00000014154 #37 SLA (ENSDLEG00000014197) ENSDLEG00000014206 NDRG1 (ENSDLEG00000014229) Vaquita MODERN SPECIES 8 FER1L6 (ENSPSNG00000012680) TMEM65 (ENSPSNG00000013119) #7 TRMT12 (ENSPSNG00000013218) RNF139 (ENSPSNG00000013258) #8 TATDN1 (ENSPSNG00000013367) #9 NDUFB9 (ENSPSNG00000013777) #10 MTSS1 (ENSPSNG00000013959) #11 ZNF572 (ENSPSNG00000014048) #12 SQLE (ENSPSNG00000014136) #13 WASHC5 (ENSPSNG00000014412) #14 NSMCE2 (ENSPSNG00000014603) #15 TRIB1 (ENSPSNG00000014706) #16 LRATD2 (ENSPSNG00000014803) #18 ENSPSNG00000014849 ENSPSNG00000014896 MYC (ENSPSNG00000014921) #22 CYRIB (ENSPSNG00000015032) #24 ASAP1 (ENSPSNG00000015168) #25 ENSPSNG00000015244 ADCY8 (ENSPSNG00000015324) #27 EFR3A (ENSPSNG00000015825) #29 OC90 (ENSPSNG00000016074) #30 HHLA1 (ENSPSNG00000016271) #31 KCNQ3 (ENSPSNG00000016477) #32 DNAAF11 (ENSPSNG00000016918) #34 TMEM71 (ENSPSNG00000017000) #35 PHF20L1 (ENSPSNG00000017085) #36 TG (ENSPSNG00000017325) #37 SLA (ENSPSNG00000017911) CCN4 (ENSPSNG00000018093) NDRG1 (ENSPSNG00000018164) Dolphin MODERN SPECIES 4723 MYC (ENSTTRG00000016278) #22 Sperm whale MODERN SPECIES 602 MYC (ENSPCTG00005016248) #22 Blue whale MODERN SPECIES 8 ANXA13 (ENSBMSG00010019706) FAM91A1 (ENSBMSG00010019645) FER1L6 (ENSBMSG00010019541) TMEM65 (ENSBMSG00010019486) #7 ENSBMSG00010019472 RNF139 (ENSBMSG00010019456) #8 TATDN1 (ENSBMSG00010019440) #9 NDUFB9 (ENSBMSG00010019403) #10 MTSS1 (ENSBMSG00010019284) #11 ZNF572 (ENSBMSG00010019254) #12 SQLE (ENSBMSG00010019196) #13 WASHC5 (ENSBMSG00010018931) #14 NSMCE2 (ENSBMSG00010018858) #15 TRIB1 (ENSBMSG00010018829) #16 LRATD2 (ENSBMSG00010018810) #18 MYC (ENSBMSG00010018783) #22 ENSBMSG00010018757 #23 ENSBMSG00010018725 #24 ASAP1 (ENSBMSG00010018519) #25 ENSBMSG00010018469 ADCY8 (ENSBMSG00010018305) #27 EFR3A (ENSBMSG00010018091) #29 OC90 (ENSBMSG00010017991) #30 HHLA1 (ENSBMSG00010017920) #31 KCNQ3 (ENSBMSG00010017717) #32 DNAAF11 (ENSBMSG00010017343) #34 TMEM71 (ENSBMSG00010017212) #35 PHF20L1 (ENSBMSG00010017136) #36 SLA (ENSBMSG00010017050) ENSBMSG00010016990 #37 CCN4 (ENSBMSG00010016943) Pecora ANCESTRAL SPECIES 20 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Percora_a ANCESTRAL SPECIES 23 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Bovidae ANCESTRAL SPECIES 22 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00940000153052.c.b.a.b.l.c.a.a.b ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Caprinae ANCESTRAL SPECIES 18 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00940000153052.c.b.a.b.l.c.a.a.b ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Goat MODERN SPECIES 5 ANXA13 (ENSCHIG00000012316) FAM91A1 (ENSCHIG00000009014) FER1L6 (ENSCHIG00000019075) TMEM65 (ENSCHIG00000010204) #7 TRMT12 (ENSCHIG00000016574) RNF139 (ENSCHIG00000021860) #8 TATDN1 (ENSCHIG00000024616) #9 NDUFB9 (ENSCHIG00000020741) #10 MTSS1 (ENSCHIG00000023315) #11 ZNF572 (ENSCHIG00000013612) #12 SQLE (ENSCHIG00000025130) #13 WASHC5 (ENSCHIG00000012199) #14 NSMCE2 (ENSCHIG00000027170) #15 TRIB1 (ENSCHIG00000021266) #16 LRATD2 (ENSCHIG00000009416) #18 MYC (ENSCHIG00000013686) #22 ENSCHIG00000018918 #23 ENSCHIG00000005794 #24 ASAP1 (ENSCHIG00000020558) #25 ADCY8 (ENSCHIG00000026047) #27 ENSCHIG00000008417 EFR3A (ENSCHIG00000022409) #29 OC90 (ENSCHIG00000014260) #30 HHLA1 (ENSCHIG00000009769) #31 KCNQ3 (ENSCHIG00000022278) #32 DNAAF11 (ENSCHIG00000008846) #34 TMEM71 (ENSCHIG00000013935) #35 PHF20L1 (ENSCHIG00000009054) #36 TG (ENSCHIG00000026405) #37 SLA (ENSCHIG00000017077) CCN4 (ENSCHIG00000012315) Rambouillet Sheep MODERN SPECIES 25 RNF139 (ENSOARG00020012478) #8 TATDN1 (ENSOARG00020012205) #9 NDUFB9 (ENSOARG00020012046) #10 MTSS1 (ENSOARG00020011599) #11 ENSOARG00020011568 ZNF572 (ENSOARG00020011524) #12 SQLE (ENSOARG00020011372) #13 WASHC5 (ENSOARG00020010489) #14 NSMCE2 (ENSOARG00020010360) #15 TRIB1 (ENSOARG00020010295) #16 ENSOARG00020010223 LRATD2 (ENSOARG00020010199) #18 ENSOARG00020010136 ENSOARG00020010049 ENSOARG00020010012 MYC (ENSOARG00020009900) #22 ENSOARG00020009811 #23 ENSOARG00020009780 CYRIB (ENSOARG00020009735) #24 ASAP1 (ENSOARG00020009370) #25 ADCY8 (ENSOARG00020008946) #27 EFR3A (ENSOARG00020008663) #29 OC90 (ENSOARG00020008555) #30 HHLA1 (ENSOARG00020008437) #31 KCNQ3 (ENSOARG00020008100) #32 DNAAF11 (ENSOARG00020007212) #34 ENSOARG00020007007 PHF20L1 (ENSOARG00020006479) #36 SLA (ENSOARG00020006379) TG (ENSOARG00020006257) #37 NDRG1 (ENSOARG00020005943) Bovinae ANCESTRAL SPECIES 18 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000160886 ENSGT00940000166198 ENSGT00940000155285.b.b #22 ENSGT00940000154509.z ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00940000153052.c.b.a.b.l.c.a.a.b ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 Bos ANCESTRAL SPECIES 21 ENSGT00390000017802 #7 ENSGT00940000155210.a.b.y ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000160886.d ENSGT00940000166198 ENSGT00940000155285.b.b #22 ENSGT00940000154509.z ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00940000153052.c.b.a.b.l.c.a.a.b ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 Bos_a ANCESTRAL SPECIES 43 ENSGT00940000155285.b.b #22 ENSGT00940000154509.z ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Wild yak MODERN SPECIES 1148 MYC (ENSBMUG00000008022) #22 ENSBMUG00000007963 GSDMC (ENSBMUG00000007958) #23 CYRIB (ENSBMUG00000007935) #24 ASAP1 (ENSBMUG00000006493) #25 ADCY8 (ENSBMUG00000005531) #27 ENSBMUG00000005495 Domestic yak MODERN SPECIES 9 ANXA13 (ENSBGRG00000014844) KLHL38 (ENSBGRG00000015765) ENSBGRG00000015835 FBXO32 (ENSBGRG00000015935) NTAQ1 (ENSBGRG00000016244) ATAD2 (ENSBGRG00000016382) ZHX1 (ENSBGRG00000016684) C8orf76 (ENSBGRG00000016695) FAM83A (ENSBGRG00000016752) DERL1 (ENSBGRG00000016813) TBC1D31 (ENSBGRG00000017139) ZHX2 (ENSBGRG00000018256) ENSBGRG00000018273 ENSBGRG00000018302 ENSBGRG00000018322 MYC (ENSBGRG00000018699) #22 ENSBGRG00000018788 GSDMC (ENSBGRG00000018833) #23 CYRIB (ENSBGRG00000019014) #24 ENSBGRG00000019206 ASAP1 (ENSBGRG00000019235) #25 ADCY8 (ENSBGRG00000019689) #27 EFR3A (ENSBGRG00000020172) #29 HHLA1 (ENSBGRG00000020876) #31 KCNQ3 (ENSBGRG00000021011) #32 ENSBGRG00000021423 DNAAF11 (ENSBGRG00000021441) #34 TMEM71 (ENSBGRG00000021600) #35 PHF20L1 (ENSBGRG00000021817) #36 TG (ENSBGRG00000022063) #37 SLA (ENSBGRG00000022497) Bos_b ANCESTRAL SPECIES 25 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000160886.d ENSGT00940000166198 ENSGT00940000155285.b.b #22 ENSGT00940000154509.z ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000018141.i.a.a.a.b.b ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00940000153052.c.b.a.b.l.c.a.a.b ENSGT00390000002143.a #29 ENSGT00940000159042.a #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159104 Cow MODERN SPECIES 5 FER1L6 (ENSBTAG00000013537) TMEM65 (ENSBTAG00000022114) #7 TRMT12 (ENSBTAG00000020398) RNF139 (ENSBTAG00000020399) #8 TATDN1 (ENSBTAG00000033446) #9 NDUFB9 (ENSBTAG00000020405) #10 MTSS1 (ENSBTAG00000020407) #11 ZNF572 (ENSBTAG00000009072) #12 SQLE (ENSBTAG00000005498) #13 WASHC5 (ENSBTAG00000010275) #14 NSMCE2 (ENSBTAG00000009394) #15 TRIB1 (ENSBTAG00000023179) #16 LRATD2 (ENSBTAG00000026172) #18 ENSBTAG00000050469 ENSBTAG00000052622 MYC (ENSBTAG00000008409) #22 ENSBTAG00000050216 GSDMC (ENSBTAG00000017478) #23 ENSBTAG00000052291 CYRIB (ENSBTAG00000020801) #24 ASAP1 (ENSBTAG00000003185) #25 ADCY8 (ENSBTAG00000014600) #27 ENSBTAG00000003838 EFR3A (ENSBTAG00000047834) #29 OC90 (ENSBTAG00000007736) #30 HHLA1 (ENSBTAG00000034196) #31 KCNQ3 (ENSBTAG00000020667) #32 DNAAF11 (ENSBTAG00000010548) #34 TMEM71 (ENSBTAG00000017138) #35 PHF20L1 (ENSBTAG00000006869) #36 SLA (ENSBTAG00000007828) Hybrid Bos Indicus MODERN SPECIES 5 RNF139 (ENSBIXG00005027832) #8 TATDN1 (ENSBIXG00005027923) #9 NDUFB9 (ENSBIXG00005027977) #10 MTSS1 (ENSBIXG00005004825) #11 ZNF572 (ENSBIXG00005028142) #12 SQLE (ENSBIXG00005028246) #13 WASHC5 (ENSBIXG00005028371) #14 NSMCE2 (ENSBIXG00005028462) #15 TRIB1 (ENSBIXG00005028498) #16 LRATD2 (ENSBIXG00005028575) #18 ENSBIXG00005006639 ENSBIXG00005028619 ENSBIXG00005002377 ENSBIXG00005004951 ENSBIXG00005004952 MYC (ENSBIXG00005028785) #22 ENSBIXG00005005029 GSDMC (ENSBIXG00005028921) #23 ENSBIXG00005005063 CYRIB (ENSBIXG00005002096) #24 ENSBIXG00005029009 ASAP1 (ENSBIXG00005005233) #25 ADCY8 (ENSBIXG00005031309) #27 ENSBIXG00005031307 EFR3A (ENSBIXG00005031297) #29 ENSBIXG00005031289 #30 HHLA1 (ENSBIXG00005031286) #31 KCNQ3 (ENSBIXG00005031272) #32 DNAAF11 (ENSBIXG00005031261) #34 TMEM71 (ENSBIXG00005031248) #35 PHF20L1 (ENSBIXG00005031232) #36 American bison MODERN SPECIES 3118 MYC (ENSBBBG00000022548) #22 ENSBBBG00000022571 ENSBBBG00000022581 #23 CYRIB (ENSBBBG00000022674) #24 ASAP1 (ENSBBBG00000022792) #25 ADCY8 (ENSBBBG00000022858) #27 ENSBBBG00000022875 EFR3A (ENSBBBG00000023024) #29 Siberian musk deer MODERN SPECIES 141 TMEM65 (ENSMMSG00000017293) #7 TRMT12 (ENSMMSG00000017332) RNF139 (ENSMMSG00000017342) #8 TATDN1 (ENSMMSG00000017369) #9 NDUFB9 (ENSMMSG00000017631) #10 MTSS1 (ENSMMSG00000017705) #11 ENSMMSG00000017794 ZNF572 (ENSMMSG00000017842) #12 SQLE (ENSMMSG00000017882) #13 ENSMMSG00000018087 #14 NSMCE2 (ENSMMSG00000018145) #15 TRIB1 (ENSMMSG00000018222) #16 ENSMMSG00000018283 ENSMMSG00000018294 MYC (ENSMMSG00000018392) #22 ENSMMSG00000018456 #23 ENSMMSG00000018571 ##23 CYRIB (ENSMMSG00000018610) #24 ASAP1 (ENSMMSG00000018732) #25 ADCY8 (ENSMMSG00000019149) #27 ENSMMSG00000019289 EFR3A (ENSMMSG00000019334) #29 ENSMMSG00000019575 #30 HHLA1 (ENSMMSG00000019588) #31 KCNQ3 (ENSMMSG00000019674) #32 DNAAF11 (ENSMMSG00000019909) #34 TMEM71 (ENSMMSG00000019968) #35 PHF20L1 (ENSMMSG00000020006) #36 TG (ENSMMSG00000020127) #37 SLA (ENSMMSG00000020438) Yarkand deer MODERN SPECIES 13 FER1L6 (ENSCHYG00000026560) TMEM65 (ENSCHYG00000026513) #7 TRMT12 (ENSCHYG00000026507) RNF139 (ENSCHYG00000026501) #8 TATDN1 (ENSCHYG00000026427) #9 ENSCHYG00000026380 #10 MTSS1 (ENSCHYG00000026315) #11 ZNF572 (ENSCHYG00000026279) #12 SQLE (ENSCHYG00000026235) #13 WASHC5 (ENSCHYG00000026155) #14 NSMCE2 (ENSCHYG00000026117) #15 ENSCHYG00000026102 TRIB1 (ENSCHYG00000026086) #16 ENSCHYG00000026068 ENSCHYG00000026063 MYC (ENSCHYG00000026036) #22 ENSCHYG00000026032 ENSCHYG00000026012 #23 ENSCHYG00000026001 ##23 CYRIB (ENSCHYG00000025925) #24 ASAP1 (ENSCHYG00000025395) #25 ENSCHYG00000025337 ADCY8 (ENSCHYG00000024999) #27 EFR3A (ENSCHYG00000024549) #29 OC90 (ENSCHYG00000024417) #30 HHLA1 (ENSCHYG00000024323) #31 KCNQ3 (ENSCHYG00000024048) #32 DNAAF11 (ENSCHYG00000023947) #34 TMEM71 (ENSCHYG00000023721) #35 ENSCHYG00000023687 PHF20L1 (ENSCHYG00000023293) #36 Laurasiatheria_b ANCESTRAL SPECIES 20 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Carnivora ANCESTRAL SPECIES 22 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Caniformia ANCESTRAL SPECIES 23 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Caniformia_b ANCESTRAL SPECIES 22 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809.d #10 ENSGT00960000188315 ENSGT00390000005809.c.a #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Ursidae ANCESTRAL SPECIES 26 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272.e #9 ENSGT00390000005809.d #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b.b Giant Panda MODERN SPECIES 19 KLHL38 (ENSAMEG00000011186) ANXA13 (ENSAMEG00000011197) ENSAMEG00000026235 FER1L6 (ENSAMEG00000011316) TRMT12 (ENSAMEG00000019612) RNF139 (ENSAMEG00000015889) #8 TATDN1 (ENSAMEG00000015865) #9 ENSAMEG00000015852 #10 MTSS1 (ENSAMEG00000015819) #11 ZNF572 (ENSAMEG00000000301) #12 SQLE (ENSAMEG00000000303) #13 WASHC5 (ENSAMEG00000000329) #14 NSMCE2 (ENSAMEG00000000369) #15 TRIB1 (ENSAMEG00000000373) #16 LRATD2 (ENSAMEG00000000378) #18 MYC (ENSAMEG00000014717) #22 ENSAMEG00000014712 #23 ENSAMEG00000014694 ##23 CYRIB (ENSAMEG00000014669) #24 ENSAMEG00000014578 #25 ADCY8 (ENSAMEG00000013039) #27 EFR3A (ENSAMEG00000012999) #29 OC90 (ENSAMEG00000012980) #30 KCNQ3 (ENSAMEG00000012923) #32 DNAAF11 (ENSAMEG00000012908) #34 TMEM71 (ENSAMEG00000012906) #35 PHF20L1 (ENSAMEG00000012878) #36 TG (ENSAMEG00000012818) #37 ENSAMEG00000012856 ENSAMEG00000016750 ENSAMEG00000025766 Ursus ANCESTRAL SPECIES ENSGT00940000155285.b.b #22 American black bear MODERN SPECIES 1212 MYC (ENSUAMG00000024264) #22 Mustelinae ANCESTRAL SPECIES 68 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809.c.a #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00390000000510.p ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00940000157501.l ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 Ferret MODERN SPECIES 172 FAM91A1 (ENSMPUG00000001188) FER1L6 (ENSMPUG00000001190) TMEM65 (ENSMPUG00000001274) #7 TRMT12 (ENSMPUG00000019150) RNF139 (ENSMPUG00000001276) #8 TATDN1 (ENSMPUG00000001278) #9 NDUFB9 (ENSMPUG00000001303) #10 MTSS1 (ENSMPUG00000001312) #11 ZNF572 (ENSMPUG00000001315) #12 SQLE (ENSMPUG00000001318) #13 WASHC5 (ENSMPUG00000001320) #14 NSMCE2 (ENSMPUG00000001324) #15 TRIB1 (ENSMPUG00000001325) #16 ENSMPUG00000019155 LRATD2 (ENSMPUG00000001326) #18 MYC (ENSMPUG00000001327) #22 ENSMPUG00000001328 ENSMPUG00000019165 ENSMPUG00000001329 ENSMPUG00000001332 #23 ENSMPUG00000001335 CYRIB (ENSMPUG00000001375) #24 ASAP1 (ENSMPUG00000001385) #25 ENSMPUG00000019169 ADCY8 (ENSMPUG00000001395) #27 EFR3A (ENSMPUG00000001401) #29 OC90 (ENSMPUG00000001413) #30 HHLA1 (ENSMPUG00000001421) #31 KCNQ3 (ENSMPUG00000001440) #32 ENSMPUG00000001567 DNAAF11 (ENSMPUG00000001571) #34 American mink MODERN SPECIES 154 MYC (ENSNVIG00000008865) #22 ENSNVIG00000008800 ENSNVIG00000008781 #23 ENSNVIG00000008778 CYRIB (ENSNVIG00000008710) #24 ASAP1 (ENSNVIG00000008548) #25 ADCY8 (ENSNVIG00000008421) #27 EFR3A (ENSNVIG00000008327) #29 OC90 (ENSNVIG00000008293) #30 HHLA1 (ENSNVIG00000008252) #31 KCNQ3 (ENSNVIG00000008182) #32 Canidae ANCESTRAL SPECIES 33 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Canis_lupus ANCESTRAL SPECIES 19 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00940000153525.h.d.b.b ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Dog MODERN SPECIES 4 ANXA13 (ENSCAFG00845010107) FAM91A1 (ENSCAFG00845010407) FER1L6 (ENSCAFG00845010656) RNF139 (ENSCAFG00845011445) #8 TATDN1 (ENSCAFG00845011530) #9 NDUFB9 (ENSCAFG00845011733) #10 MTSS1 (ENSCAFG00845011807) #11 RPL21 (ENSCAFG00845011960) ZNF572 (ENSCAFG00845011976) #12 SQLE (ENSCAFG00845012036) #13 WASHC5 (ENSCAFG00845012127) #14 NSMCE2 (ENSCAFG00845012233) #15 TRIB1 (ENSCAFG00845012294) #16 ENSCAFG00845012377 LRATD2 (ENSCAFG00845012412) #18 MYC (ENSCAFG00845012475) #22 ENSCAFG00845012688 #23 FAM49B (ENSCAFG00845012798) #24 ASAP1 (ENSCAFG00845013030) #25 ADCY8 (ENSCAFG00845013615) #27 ENSCAFG00845014002 LDHB (ENSCAFG00845007136) EFR3A (ENSCAFG00845007232) #29 HHLA1 (ENSCAFG00845007582) #31 KCNQ3 (ENSCAFG00845007700) #32 LRRC6 (ENSCAFG00845007949) #34 TMEM71 (ENSCAFG00845008227) #35 PHF20L1 (ENSCAFG00845008447) #36 TG (ENSCAFG00845008772) #37 SLA (ENSCAFG00845009256) CCN4 (ENSCAFG00845009509) Dingo MODERN SPECIES 88 KLHL38 (ENSCAFG00020006338) ANXA13 (ENSCAFG00020006341) FAM91A1 (ENSCAFG00020006361) FER1L6 (ENSCAFG00020006418) TRMT12 (ENSCAFG00020006500) RNF139 (ENSCAFG00020006506) #8 TATDN1 (ENSCAFG00020006510) #9 NDUFB9 (ENSCAFG00020006525) #10 MTSS1 (ENSCAFG00020006532) #11 ZNF572 (ENSCAFG00020006553) #12 SQLE (ENSCAFG00020006554) #13 WASHC5 (ENSCAFG00020006561) #14 NSMCE2 (ENSCAFG00020006569) #15 TRIB1 (ENSCAFG00020006573) #16 LRATD2 (ENSCAFG00020006594) #18 MYC (ENSCAFG00020006613) #22 ENSCAFG00020006654 GSDMC (ENSCAFG00020006656) #23 CYRIB (ENSCAFG00020006688) #24 ENSCAFG00020006697 ASAP1 (ENSCAFG00020006911) #25 ADCY8 (ENSCAFG00020012822) #27 ENSCAFG00020012848 EFR3A (ENSCAFG00020012885) #29 OC90 (ENSCAFG00020013405) #30 KCNQ3 (ENSCAFG00020013410) #32 DNAAF11 (ENSCAFG00020013419) #34 TMEM71 (ENSCAFG00020013427) #35 ENSCAFG00020013435 #36 ENSCAFG00020013439 #36 ENSCAFG00020013443 #37 Red fox MODERN SPECIES 13 KLHL38 (ENSVVUG00000016276) ANXA13 (ENSVVUG00000016285) FAM91A1 (ENSVVUG00000016295) FER1L6 (ENSVVUG00000016409) TRMT12 (ENSVVUG00000016790) RNF139 (ENSVVUG00000016792) #8 TATDN1 (ENSVVUG00000016797) #9 NDUFB9 (ENSVVUG00000016810) #10 MTSS1 (ENSVVUG00000016820) #11 ZNF572 (ENSVVUG00000016853) #12 SQLE (ENSVVUG00000016857) #13 WASHC5 (ENSVVUG00000016865) #14 NSMCE2 (ENSVVUG00000016878) #15 ENSVVUG00000016885 #16 FAM84B (ENSVVUG00000016910) #18 MYC (ENSVVUG00000016922) #22 ENSVVUG00000016935 ENSVVUG00000016955 ENSVVUG00000016959 ENSVVUG00000016962 #23 FAM49B (ENSVVUG00000016971) #24 ASAP1 (ENSVVUG00000017001) #25 ADCY8 (ENSVVUG00000017031) #27 EFR3A (ENSVVUG00000017057) #29 OC90 (ENSVVUG00000017091) #30 KCNQ3 (ENSVVUG00000017113) #32 LRRC6 (ENSVVUG00000017284) #34 TMEM71 (ENSVVUG00000017304) #35 PHF20L1 (ENSVVUG00000017330) #36 TG (ENSVVUG00000017594) #37 SLA (ENSVVUG00000019262) Felidae ANCESTRAL SPECIES 22 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Panthera ANCESTRAL SPECIES 16 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000177637 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 Panthera_a ANCESTRAL SPECIES 16 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000177637 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 lion MODERN SPECIES 509 ANXA13 (ENSPLOG00000004691) FAM91A1 (ENSPLOG00000004668) FER1L6 (ENSPLOG00000004636) TMEM65 (ENSPLOG00000004606) #7 TRMT12 (ENSPLOG00000003293) RNF139 (ENSPLOG00000003288) #8 TATDN1 (ENSPLOG00000003218) #9 NDUFB9 (ENSPLOG00000003169) #10 MTSS1 (ENSPLOG00000003106) #11 ZNF572 (ENSPLOG00000003078) #12 SQLE (ENSPLOG00000003057) #13 WASHC5 (ENSPLOG00000003010) #14 NSMCE2 (ENSPLOG00000002962) #15 TRIB1 (ENSPLOG00000002944) #16 LRATD2 (ENSPLOG00000002930) #18 MYC (ENSPLOG00000002875) #22 ENSPLOG00000002858 GSDMC (ENSPLOG00000002840) #23 CYRIB (ENSPLOG00000002794) #24 ASAP1 (ENSPLOG00000002668) #25 ADCY8 (ENSPLOG00000002567) #27 EFR3A (ENSPLOG00000002475) #29 OC90 (ENSPLOG00000002428) #30 HHLA1 (ENSPLOG00000002401) #31 KCNQ3 (ENSPLOG00000002347) #32 DNAAF11 (ENSPLOG00000002285) #34 TMEM71 (ENSPLOG00000002241) #35 PHF20L1 (ENSPLOG00000002187) #36 ENSPLOG00000002148 SLA (ENSPLOG00000002109) ENSPLOG00000002060 #37 leopard MODERN SPECIES 34 ANXA13 (ENSPPRG00000024516) FAM91A1 (ENSPPRG00000024483) FER1L6 (ENSPPRG00000024418) TMEM65 (ENSPPRG00000024390) #7 RNF139 (ENSPPRG00000024376) #8 TATDN1 (ENSPPRG00000024355) #9 NDUFB9 (ENSPPRG00000024328) #10 MTSS1 (ENSPPRG00000024076) #11 ZNF572 (ENSPPRG00000024012) #12 SQLE (ENSPPRG00000023972) #13 WASHC5 (ENSPPRG00000023877) #14 NSMCE2 (ENSPPRG00000023841) #15 TRIB1 (ENSPPRG00000023747) #16 ENSPPRG00000019550 #18 ENSPPRG00000023723 #18 MYC (ENSPPRG00000023691) #22 ENSPPRG00000023635 GSDMC (ENSPPRG00000023614) #23 CYRIB (ENSPPRG00000023477) #24 ASAP1 (ENSPPRG00000023384) #25 ADCY8 (ENSPPRG00000023138) #27 EFR3A (ENSPPRG00000022909) #29 OC90 (ENSPPRG00000022875) #30 HHLA1 (ENSPPRG00000022713) #31 KCNQ3 (ENSPPRG00000000125) #32 DNAAF11 (ENSPPRG00000000373) #34 TMEM71 (ENSPPRG00000000497) #35 PHF20L1 (ENSPPRG00000000672) #36 SLA (ENSPPRG00000000784) ENSPPRG00000000896 #37 CCN4 (ENSPPRG00000001054) Cat MODERN SPECIES 249 KLHL38 (ENSFCAG00000010469) ANXA13 (ENSFCAG00000010470) FAM91A1 (ENSFCAG00000010472) FER1L6 (ENSFCAG00000018500) TMEM65 (ENSFCAG00000045729) #7 RNF139 (ENSFCAG00000031765) #8 TATDN1 (ENSFCAG00000034753) #9 NDUFB9 (ENSFCAG00000036360) #10 MTSS1 (ENSFCAG00000004679) #11 ZNF572 (ENSFCAG00000024394) #12 SQLE (ENSFCAG00000031123) #13 WASHC5 (ENSFCAG00000004683) #14 NSMCE2 (ENSFCAG00000004684) #15 TRIB1 (ENSFCAG00000004685) #16 LRATD2 (ENSFCAG00000035569) #18 MYC (ENSFCAG00000041539) #22 GSDMC (ENSFCAG00000006972) #23 CYRIB (ENSFCAG00000015625) #24 ASAP1 (ENSFCAG00000006435) #25 ADCY8 (ENSFCAG00000006436) #27 EFR3A (ENSFCAG00000029928) #29 OC90 (ENSFCAG00000000982) #30 HHLA1 (ENSFCAG00000024254) #31 KCNQ3 (ENSFCAG00000000984) #32 DNAAF11 (ENSFCAG00000008520) #34 TMEM71 (ENSFCAG00000040314) #35 PHF20L1 (ENSFCAG00000000706) #36 TG (ENSFCAG00000011954) #37 SLA (ENSFCAG00000041504) CCN4 (ENSFCAG00000025709) NDRG1 (ENSFCAG00000003212) Laurasiatheria_c ANCESTRAL SPECIES 19 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Equus ANCESTRAL SPECIES 14 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Donkey MODERN SPECIES 3 FAM91A1 (ENSEASG00005022462) FER1L6 (ENSEASG00005022452) TMEM65 (ENSEASG00005031098) #7 RNF139 (ENSEASG00005022440) #8 TATDN1 (ENSEASG00005022428) #9 NDUFB9 (ENSEASG00005026137) #10 MTSS1 (ENSEASG00005022408) #11 ZNF572 (ENSEASG00005022396) #12 SQLE (ENSEASG00005022392) #13 WASHC5 (ENSEASG00005022380) #14 NSMCE2 (ENSEASG00005022375) #15 TRIB1 (ENSEASG00005035610) #16 ENSEASG00005022366 ENSEASG00005032722 LRATD2 (ENSEASG00005022361) #18 MYC (ENSEASG00005029845) #22 ENSEASG00005022323 #23 ENSEASG00005038161 ##23 CYRIB (ENSEASG00005022304) #24 ASAP1 (ENSEASG00005022277) #25 ADCY8 (ENSEASG00005022264) #27 EFR3A (ENSEASG00005022218) #29 OC90 (ENSEASG00005036426) #30 HHLA1 (ENSEASG00005022159) #31 KCNQ3 (ENSEASG00005022131) #32 DNAAF11 (ENSEASG00005022109) #34 TMEM71 (ENSEASG00005022099) #35 PHF20L1 (ENSEASG00005022090) #36 SLA (ENSEASG00005022081) TG (ENSEASG00005022050) #37 CCN4 (ENSEASG00005026762) Horse MODERN SPECIES 30 FAM91A1 (ENSECAG00000011491) FER1L6 (ENSECAG00000019298) TMEM65 (ENSECAG00000033363) #7 RNF139 (ENSECAG00000008926) #8 TATDN1 (ENSECAG00000011179) #9 NDUFB9 (ENSECAG00000018238) #10 MTSS1 (ENSECAG00000021545) #11 WASHC5 (ENSECAG00000024402) #14 ZNF572 (ENSECAG00000012206) #12 SQLE (ENSECAG00000013998) #13 NSMCE2 (ENSECAG00000026944) #15 TRIB1 (ENSECAG00000019660) #16 ENSECAG00000002402 LRATD2 (ENSECAG00000021976) #18 ENSECAG00000059508 MYC (ENSECAG00000022059) #22 ENSECAG00000022588 #23 ENSECAG00000046146 #23 ENSECAG00000053909 #23 ENSECAG00000023276 ##23 CYRIB (ENSECAG00000023517) #24 ASAP1 (ENSECAG00000016246) #25 ADCY8 (ENSECAG00000024601) #27 ENSECAG00000056142 EFR3A (ENSECAG00000014883) #29 OC90 (ENSECAG00000014682) #30 HHLA1 (ENSECAG00000015921) #31 KCNQ3 (ENSECAG00000017467) #32 DNAAF11 (ENSECAG00000003551) #34 TMEM71 (ENSECAG00000056818) #35 PHF20L1 (ENSECAG00000015107) #36 Chiroptera ANCESTRAL SPECIES 27 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000155285.b.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300.i #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Microchiroptera ANCESTRAL SPECIES 27 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000155285.b.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300.i #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Greater horseshoe bat MODERN SPECIES 5 KLHL38 (ENSRFEG00010013487) ANXA13 (ENSRFEG00010013564) FAM91A1 (ENSRFEG00010013710) FER1L6 (ENSRFEG00010013777) TMEM65 (ENSRFEG00010014392) #7 ENSRFEG00010014471 RNF139 (ENSRFEG00010014527) #8 TATDN1 (ENSRFEG00010014584) #9 NDUFB9 (ENSRFEG00010014891) #10 MTSS1 (ENSRFEG00010014989) #11 ZNF572 (ENSRFEG00010015204) #12 SQLE (ENSRFEG00010015259) #13 WASHC5 (ENSRFEG00010015635) #14 NSMCE2 (ENSRFEG00010015710) #15 TRIB1 (ENSRFEG00010015874) #16 MYC (ENSRFEG00010016044) #22 CYRIB (ENSRFEG00010016153) #24 ASAP1 (ENSRFEG00010016291) #25 ADCY8 (ENSRFEG00010016768) #27 ENSRFEG00010017331 EFR3A (ENSRFEG00010017399) #29 OC90 (ENSRFEG00010017787) #30 HHLA1 (ENSRFEG00010017925) #31 KCNQ3 (ENSRFEG00010018096) #32 DNAAF11 (ENSRFEG00010018239) #34 TMEM71 (ENSRFEG00010018297) #35 PHF20L1 (ENSRFEG00010018338) #36 TG (ENSRFEG00010018495) #37 SLA (ENSRFEG00010019049) CCN4 (ENSRFEG00010019132) NDRG1 (ENSRFEG00010019263) Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES ENSGT00940000155285.b.a.a ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000155285.b.a.a ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000155285.b.a.a ##22 Glires ANCESTRAL SPECIES ENSGT00940000155285.b.a.a ##22 Rodentia ANCESTRAL SPECIES ENSGT00940000155285.b.a.a ##22 Rodentia_B ANCESTRAL SPECIES 17 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Myomorpha ANCESTRAL SPECIES 18 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Muroidea ANCESTRAL SPECIES 14 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Muroidea_A ANCESTRAL SPECIES 9 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00390000015252.c.b ENSGT00390000003114.e.b.b.q.a ENSGT01100000263562.b.a.a.c.a.h ENSGT00940000159198 #18 ENSGT01100000263562.b.a.a.c.a.g ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Cricetidae ANCESTRAL SPECIES 10 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00390000015252.c.b ENSGT00390000003114.e.b.b.q.a ENSGT01100000263562.b.a.a.c.a.h ENSGT00940000159198 #18 ENSGT01100000263562.b.a.a.c.a.g ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Cricetinae ANCESTRAL SPECIES 59 ENSGT00940000159198 #18 ENSGT01100000263562.b.a.a.c.a.g ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b.j #23 ENSGT00950000183140.a.a.m.a.a.b.i #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159104 ENSGT00940000154725 Golden Hamster MODERN SPECIES 702 Lratd2 (ENSMAUG00000007229) #18 A1bg (ENSMAUG00000007514) Myc (ENSMAUG00000007864) ##22 ENSMAUG00000008438 #23 ENSMAUG00000008687 #23 ENSMAUG00000008551 #23 ENSMAUG00000008964 ##23 ENSMAUG00000009213 #24 Asap1 (ENSMAUG00000010008) #25 Adcy8 (ENSMAUG00000014347) #27 Efr3a (ENSMAUG00000017664) #29 Oc90 (ENSMAUG00000014780) #30 Hhla1 (ENSMAUG00000000046) #31 Kcnq3 (ENSMAUG00000015358) #32 Dnaaf11 (ENSMAUG00000018373) #34 ENSMAUG00000016993 #35 Phf20l1 (ENSMAUG00000018069) #36 Sla (ENSMAUG00000002090) Chinese hamster chok1gshd MODERN SPECIES 357 ENSCGRG00001008358 Lratd2 (ENSCGRG00001013758) #18 A1bg (ENSCGRG00001015145) ENSCGRG00001013339 Myc (ENSCGRG00001016978) ##22 Cricetidae_B ANCESTRAL SPECIES 6 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00390000015252.c.b ENSGT00390000003114.e.b.b.q.a ENSGT01100000263562.b.a.a.c.a.h ENSGT00940000159198 #18 ENSGT01100000263562.b.a.a.c.a.g ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Prairie vole MODERN SPECIES 2 Klhl38 (ENSMOCG00000003679) Anxa13 (ENSMOCG00000022952) Fam91a1 (ENSMOCG00000017662) Fer1l6 (ENSMOCG00000020287) Tmem65 (ENSMOCG00000002180) #7 Rnf139 (ENSMOCG00000013793) #8 Tatdn1 (ENSMOCG00000001584) #9 Ndufb9 (ENSMOCG00000021982) #10 Mtss1 (ENSMOCG00000011955) #11 Sqle (ENSMOCG00000022832) #13 Washc5 (ENSMOCG00000009448) #14 Nsmce2 (ENSMOCG00000015988) #15 Trib1 (ENSMOCG00000007861) #16 Lratd2 (ENSMOCG00000000246) #18 A1bg (ENSMOCG00000014955) Myc (ENSMOCG00000018286) ##22 ENSMOCG00000001001 #23 ENSMOCG00000009341 #23 Cyrib (ENSMOCG00000002789) #24 Asap1 (ENSMOCG00000002939) #25 Adcy8 (ENSMOCG00000012981) #27 ENSMOCG00000002825 Efr3a (ENSMOCG00000005515) #29 Oc90 (ENSMOCG00000003122) #30 Hhla1 (ENSMOCG00000012232) #31 Kcnq3 (ENSMOCG00000017138) #32 Dnaaf11 (ENSMOCG00000022669) #34 Tmem71 (ENSMOCG00000015889) #35 Phf20l1 (ENSMOCG00000021213) #36 Sla (ENSMOCG00000020997) Tg (ENSMOCG00000022735) #37 Northern American deer mouse MODERN SPECIES 12 Ndufb9 (ENSPEMG00000024126) #10 Mtss1 (ENSPEMG00000021734) #11 ENSPEMG00000001913 ENSPEMG00000026862 Sqle (ENSPEMG00000023154) #13 Washc5 (ENSPEMG00000021906) #14 Nsmce2 (ENSPEMG00000021890) #15 Trib1 (ENSPEMG00000027673) #16 4933412E24Rik (ENSPEMG00000026431) ENSPEMG00000029431 ENSPEMG00000030011 Lratd2 (ENSPEMG00000019492) #18 ENSPEMG00000019306 A1bg (ENSPEMG00000019572) ENSPEMG00000012597 Myc (ENSPEMG00000018619) ##22 ENSPEMG00000010097 #23 Murinae ANCESTRAL SPECIES 10 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00390000015252.c.b ENSGT00390000003114.e.b.b.q.a ENSGT01100000263562.b.a.a.c.a.h ENSGT00940000159198 #18 ENSGT01100000263562.b.a.a.c.a.g ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Mus ANCESTRAL SPECIES 11 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00390000015252.c.b ENSGT00940000159198 #18 ENSGT01100000263562.b.a.a.c.a.g ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Mus_A ANCESTRAL SPECIES 13 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000160915.q ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00390000015252.c.b ENSGT00940000159198 #18 ENSGT01100000263562.b.a.a.c.a.g ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b.g #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Mus_B ANCESTRAL SPECIES 12 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000160915.q ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00390000015252.c.b ENSGT00940000159198 #18 ENSGT01100000263562.b.a.a.c.a.g ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b.g #23 ENSGT00950000183140.a.a.m.a.a.b.h #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Mus_C ANCESTRAL SPECIES 28 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000160915.q ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00390000015252.c.b ENSGT00940000159198 #18 ENSGT01100000263562.b.a.a.c.a.g ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b.g #23 ENSGT00950000183140.a.a.m.a.a.b.h #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 spretus MODERN SPECIES 6 Tmem65 (MGP_SPRETEiJ_G0020715) #7 MGP_SPRETEiJ_G0020716 Trmt12 (MGP_SPRETEiJ_G0020717) Rnf139 (MGP_SPRETEiJ_G0020718) #8 Tatdn1 (MGP_SPRETEiJ_G0020719) #9 Ndufb9 (MGP_SPRETEiJ_G0020720) #10 Mtss1 (MGP_SPRETEiJ_G0020721) #11 Sqle (MGP_SPRETEiJ_G0020722) #13 Washc5 (MGP_SPRETEiJ_G0020723) #14 Nsmce2 (MGP_SPRETEiJ_G0020724) #15 Trib1 (MGP_SPRETEiJ_G0020725) #16 MGP_SPRETEiJ_G0020726 4933412E24Rik (MGP_SPRETEiJ_G0020727) MGP_SPRETEiJ_G0020728 A1bg (MGP_SPRETEiJ_G0020730) Myc (MGP_SPRETEiJ_G0020731) ##22 MGP_SPRETEiJ_G0020732 #23 MGP_SPRETEiJ_G0020733 #23 MGP_SPRETEiJ_G0020734 #23 MGP_SPRETEiJ_G0020735 #23 Cyrib (MGP_SPRETEiJ_G0020736) #24 Asap1 (MGP_SPRETEiJ_G0020737) #25 Adcy8 (MGP_SPRETEiJ_G0020738) #27 MGP_SPRETEiJ_G0020739 Efr3a (MGP_SPRETEiJ_G0020740) #29 Oc90 (MGP_SPRETEiJ_G0020741) #30 Hhla1 (MGP_SPRETEiJ_G0020742) #31 Kcnq3 (MGP_SPRETEiJ_G0020743) #32 Dnaaf11 (MGP_SPRETEiJ_G0020744) #34 Tmem71 (MGP_SPRETEiJ_G0020745) #35 Phf20l1 (MGP_SPRETEiJ_G0020746) #36 Steppe mouse MODERN SPECIES 3179 Myc (ENSMSIG00000013529) ##22 ENSMSIG00000013621 ENSMSIG00000013666 Mouse MODERN SPECIES 6 Fam91a1 (ENSMUSG00000037119) Fer1l6 (ENSMUSG00000037106) Tmem65 (ENSMUSG00000062373) #7 Trmt12 (ENSMUSG00000037085) Rnf139 (ENSMUSG00000037075) #8 Tatdn1 (ENSMUSG00000050891) #9 Ndufb9 (ENSMUSG00000022354) #10 Mtss1 (ENSMUSG00000022353) #11 Sqle (ENSMUSG00000022351) #13 Washc5 (ENSMUSG00000022350) #14 Nsmce2 (ENSMUSG00000059586) #15 Trib1 (ENSMUSG00000032501) #16 4933412E24Rik (ENSMUSG00000071749) Lratd2 (ENSMUSG00000072568) #18 A1bg (ENSMUSG00000022347) Myc (ENSMUSG00000022346) ##22 Gsdmc (ENSMUSG00000079025) #23 Gsdmc2 (ENSMUSG00000056293) #23 Gsdmc3 (ENSMUSG00000055827) #23 Gsdmc4 (ENSMUSG00000055748) #23 Cyrib (ENSMUSG00000022378) #24 Asap1 (ENSMUSG00000022377) #25 Adcy8 (ENSMUSG00000022376) #27 Efr3a (ENSMUSG00000015002) #29 Oc90 (ENSMUSG00000015001) #30 Hhla1 (ENSMUSG00000072511) #31 Kcnq3 (ENSMUSG00000056258) #32 Dnaaf11 (ENSMUSG00000022375) #34 Tmem71 (ENSMUSG00000036944) #35 Phf20l1 (ENSMUSG00000072501) #36 Tg (ENSMUSG00000053469) #37 Ryukyu mouse MODERN SPECIES 6 Tmem65 (MGP_CAROLIEiJ_G0019818) #7 MGP_CAROLIEiJ_G0019819 Trmt12 (MGP_CAROLIEiJ_G0019820) Rnf139 (MGP_CAROLIEiJ_G0019821) #8 Tatdn1 (MGP_CAROLIEiJ_G0019822) #9 Ndufb9 (MGP_CAROLIEiJ_G0019823) #10 Mtss1 (MGP_CAROLIEiJ_G0019824) #11 Sqle (MGP_CAROLIEiJ_G0019825) #13 Washc5 (MGP_CAROLIEiJ_G0019826) #14 Nsmce2 (MGP_CAROLIEiJ_G0019827) #15 Trib1 (MGP_CAROLIEiJ_G0019828) #16 4933412E24Rik (MGP_CAROLIEiJ_G0019829) MGP_CAROLIEiJ_G0019830 Lratd2 (MGP_CAROLIEiJ_G0019831) #18 A1bg (MGP_CAROLIEiJ_G0019832) Myc (MGP_CAROLIEiJ_G0019833) ##22 MGP_CAROLIEiJ_G0019834 MGP_CAROLIEiJ_G0019835 #23 MGP_CAROLIEiJ_G0019836 #23 MGP_CAROLIEiJ_G0019837 #23 MGP_CAROLIEiJ_G0019838 #23 Cyrib (MGP_CAROLIEiJ_G0019839) #24 Asap1 (MGP_CAROLIEiJ_G0019840) #25 Adcy8 (MGP_CAROLIEiJ_G0019841) #27 Efr3a (MGP_CAROLIEiJ_G0019842) #29 Oc90 (MGP_CAROLIEiJ_G0019843) #30 Hhla1 (MGP_CAROLIEiJ_G0019844) #31 Kcnq3 (MGP_CAROLIEiJ_G0019845) #32 Dnaaf11 (MGP_CAROLIEiJ_G0019846) #34 Tmem71 (MGP_CAROLIEiJ_G0019847) #35 Phf20l1 (MGP_CAROLIEiJ_G0019848) #36 Shrew mouse MODERN SPECIES 8 Fer1l6 (MGP_PahariEiJ_G0019827) Tmem65 (MGP_PahariEiJ_G0019828) #7 Trmt12 (MGP_PahariEiJ_G0019829) Rnf139 (MGP_PahariEiJ_G0019830) #8 Tatdn1 (MGP_PahariEiJ_G0019831) #9 Ndufb9 (MGP_PahariEiJ_G0019832) #10 Mtss1 (MGP_PahariEiJ_G0019833) #11 Sqle (MGP_PahariEiJ_G0019834) #13 Washc5 (MGP_PahariEiJ_G0019835) #14 Nsmce2 (MGP_PahariEiJ_G0019836) #15 Trib1 (MGP_PahariEiJ_G0019837) #16 4933412E24Rik (MGP_PahariEiJ_G0019838) MGP_PahariEiJ_G0019839 Lratd2 (MGP_PahariEiJ_G0019840) #18 MGP_PahariEiJ_G0019841 Myc (MGP_PahariEiJ_G0019842) ##22 MGP_PahariEiJ_G0019843 #23 Cyrib (MGP_PahariEiJ_G0019844) #24 Asap1 (MGP_PahariEiJ_G0019845) #25 Adcy8 (MGP_PahariEiJ_G0019846) #27 Efr3a (MGP_PahariEiJ_G0019847) #29 Oc90 (MGP_PahariEiJ_G0019848) #30 Hhla1 (MGP_PahariEiJ_G0019849) #31 Kcnq3 (MGP_PahariEiJ_G0019850) #32 Dnaaf11 (MGP_PahariEiJ_G0019851) #34 Tmem71 (MGP_PahariEiJ_G0019852) #35 Phf20l1 (MGP_PahariEiJ_G0019853) #36 Tg (MGP_PahariEiJ_G0019854) #37 Sla (MGP_PahariEiJ_G0019855) Ccn4 (MGP_PahariEiJ_G0019856) Ndrg1 (MGP_PahariEiJ_G0019857) Rat MODERN SPECIES 17 Tatdn1 (ENSRNOG00000047198) #9 Mtss1 (ENSRNOG00000009001) #11 ENSRNOG00000062650 Sqle (ENSRNOG00000009550) #13 Washc5 (ENSRNOG00000009739) #14 Nsmce2 (ENSRNOG00000003964) #15 Trib1 (ENSRNOG00000004100) #16 LOC500876 (ENSRNOG00000004914) RGD1563100 (ENSRNOG00000004906) AABR07058124.2 (ENSRNOG00000037549) LOC500877 (ENSRNOG00000029292) Lratd2 (ENSRNOG00000004744) #18 LOC362921 (ENSRNOG00000033584) A1bg (ENSRNOG00000004692) LOC120093860 (ENSRNOG00000062947) Myc (ENSRNOG00000004500) ##22 Gsdmc (ENSRNOG00000054576) #23 RGD1359449 (ENSRNOG00000059240) ##23 Cyrib (ENSRNOG00000061246) #24 Asap1 (ENSRNOG00000058733) #25 Adcy8 (ENSRNOG00000004890) #27 ENSRNOG00000069501 Efr3a (ENSRNOG00000025528) #29 Oc90 (ENSRNOG00000025516) #30 AABR07058254.1 (ENSRNOG00000054588) #31 Kcnq3 (ENSRNOG00000005206) #32 Dnaaf11 (ENSRNOG00000005233) #34 ENSRNOG00000070626 Tmem71 (ENSRNOG00000025460) #35 Phf20l1 (ENSRNOG00000005486) #36 Tg (ENSRNOG00000006104) #37 Upper Galilee mountains blind mole rat MODERN SPECIES 1294 Fer1l6 (ENSNGAG00000012037) Tmem65 (ENSNGAG00000011951) #7 Trmt12 (ENSNGAG00000014548) Rnf139 (ENSNGAG00000013175) #8 ENSNGAG00000018459 #9 Ndufb9 (ENSNGAG00000021409) #10 Mtss1 (ENSNGAG00000023068) #11 ENSNGAG00000011211 #12 Sqle (ENSNGAG00000004521) #13 Washc5 (ENSNGAG00000014059) #14 ENSNGAG00000016935 #15 Trib1 (ENSNGAG00000018466) #16 Lratd2 (ENSNGAG00000019272) #18 ENSNGAG00000020200 Myc (ENSNGAG00000021358) ##22 ENSNGAG00000021762 #23 Cyrib (ENSNGAG00000023089) #24 Asap1 (ENSNGAG00000021518) #25 Adcy8 (ENSNGAG00000002045) #27 Lesser Egyptian jerboa MODERN SPECIES 59 Mfsd3 (ENSJJAG00000014614) Recql4 (ENSJJAG00000017588) Lrrc14 (ENSJJAG00000013498) Lrrc24 (ENSJJAG00000020237) C030006K11Rik (ENSJJAG00000019946) ENSJJAG00000014100 ENSJJAG00000015424 ENSJJAG00000023749 ENSJJAG00000016143 ENSJJAG00000006705 ENSJJAG00000008974 Zfp647 (ENSJJAG00000012017) ENSJJAG00000000364 Lratd2 (ENSJJAG00000010787) #18 ENSJJAG00000016086 Myc (ENSJJAG00000012619) ##22 ENSJJAG00000021929 ENSJJAG00000023137 #23 Cyrib (ENSJJAG00000016929) #24 Asap1 (ENSJJAG00000012834) #25 ENSJJAG00000010599 Adcy8 (ENSJJAG00000018781) #27 ENSJJAG00000019381 ENSJJAG00000022288 ENSJJAG00000018526 Efr3a (ENSJJAG00000023636) #29 ENSJJAG00000018417 Oc90 (ENSJJAG00000018951) #30 Hhla1 (ENSJJAG00000010797) #31 Kcnq3 (ENSJJAG00000004354) #32 Dnaaf11 (ENSJJAG00000014339) #34 Rodentia_A ANCESTRAL SPECIES 18 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00940000155285.b.a.a ##22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Hystricomorpha ANCESTRAL SPECIES 12 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Hystricomorpha_a ANCESTRAL SPECIES 9 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Guinea pig MODERN SPECIES 51 ANXA13 (ENSCPOG00000009981) FAM91A1 (ENSCPOG00000009997) FER1L6 (ENSCPOG00000000060) TMEM65 (ENSCPOG00000030934) #7 TRMT12 (ENSCPOG00000026520) RNF139 (ENSCPOG00000002166) #8 TATDN1 (ENSCPOG00000039026) #9 NDUFB9 (ENSCPOG00000007325) #10 MTSS1 (ENSCPOG00000015144) #11 ZNF572 (ENSCPOG00000031932) #12 SQLE (ENSCPOG00000007368) #13 WASHC5 (ENSCPOG00000007370) #14 NSMCE2 (ENSCPOG00000001047) #15 TRIB1 (ENSCPOG00000036990) #16 LRATD2 (ENSCPOG00000037883) #18 MYC (ENSCPOG00000035605) ##22 ENSCPOG00000037441 CYRIB (ENSCPOG00000001282) #24 ENSCPOG00000024811 ASAP1 (ENSCPOG00000011466) #25 ENSCPOG00000025735 ADCY8 (ENSCPOG00000007195) #27 ENSCPOG00000036719 EFR3A (ENSCPOG00000009010) #29 OC90 (ENSCPOG00000009023) #30 KCNQ3 (ENSCPOG00000009034) #32 ENSCPOG00000036047 #34 PHF20L1 (ENSCPOG00000014820) #36 SLA (ENSCPOG00000019476) TG (ENSCPOG00000009692) #37 CCN4 (ENSCPOG00000035718) Hystricomorpha_b ANCESTRAL SPECIES 27 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.a.a ##22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00950000182825.B ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Long-tailed chinchilla MODERN SPECIES 168 ZNF572 (ENSCLAG00000002623) #12 SQLE (ENSCLAG00000001576) #13 WASHC5 (ENSCLAG00000001741) #14 NSMCE2 (ENSCLAG00000001899) #15 TRIB1 (ENSCLAG00000002016) #16 LRATD2 (ENSCLAG00000017512) #18 MYC (ENSCLAG00000000909) ##22 ENSCLAG00000001086 #23 CYRIB (ENSCLAG00000001194) #24 ASAP1 (ENSCLAG00000001402) #25 ADCY8 (ENSCLAG00000003142) #27 TUBA3C (ENSCLAG00000003540) EFR3A (ENSCLAG00000004861) #29 OC90 (ENSCLAG00000001332) #30 HHLA1 (ENSCLAG00000001503) #31 KCNQ3 (ENSCLAG00000001179) #32 ENSCLAG00000001275 #34 PHF20L1 (ENSCLAG00000001398) #36 TG (ENSCLAG00000001570) #37 SLA (ENSCLAG00000002422) CCN4 (ENSCLAG00000002478) NDRG1 (ENSCLAG00000002544) Degu DUPLICATION Degu MODERN SPECIES 103 TMEM65 (ENSODEG00000003543) #7 TRMT12 (ENSODEG00000018933) RNF139 (ENSODEG00000003522) #8 ENSODEG00000003322 #9 NDUFB9 (ENSODEG00000005991) #10 MTSS1 (ENSODEG00000005974) #11 ENSODEG00000005940 SQLE (ENSODEG00000005923) #13 WASHC5 (ENSODEG00000005903) #14 NSMCE2 (ENSODEG00000005494) #15 ENSODEG00000005467 #16 ENSODEG00000005440 #16 ENSODEG00000005425 ENSODEG00000005388 LRATD2 (ENSODEG00000019440) #18 ENSODEG00000005362 ##22 ENSODEG00000005289 #24 ASAP1 (ENSODEG00000003587) #25 ADCY8 (ENSODEG00000003952) #27 ENSODEG00000003871 Degu MODERN SPECIES 212 PCDH19 (ENSODEG00000002228) ENSODEG00000002249 ENSODEG00000002256 ENSODEG00000018903 ##22 ENSODEG00000002279 TNMD (ENSODEG00000002287) TSPAN6 (ENSODEG00000002305) SRPX2 (ENSODEG00000001636) SYTL4 (ENSODEG00000001791) CSTF2 (ENSODEG00000002059) NOX1 (ENSODEG00000002168) XKRX (ENSODEG00000002306) ENSODEG00000002348 ENSODEG00000002396 ENSODEG00000002456 ENSODEG00000018857 DRP2 (ENSODEG00000002550) ENSODEG00000002595 ENSODEG00000002645 Naked mole-rat female MODERN SPECIES 1 ENSHGLG00000014989 #7 TRMT12 (ENSHGLG00000047505) ENSHGLG00000006171 RNF139 (ENSHGLG00000005311) #8 ENSHGLG00000018372 #9 NDUFB9 (ENSHGLG00000014922) #10 MTSS1 (ENSHGLG00000012623) #11 ZNF572 (ENSHGLG00000011462) #12 SQLE (ENSHGLG00000008484) #13 WASHC5 (ENSHGLG00000013191) #14 NSMCE2 (ENSHGLG00000019000) #15 TRIB1 (ENSHGLG00000038354) #16 ENSHGLG00000016266 ENSHGLG00000003612 LRATD2 (ENSHGLG00000016236) #18 MYC (ENSHGLG00000006922) ##22 GSDMC (ENSHGLG00000044963) #23 FAM49B (ENSHGLG00000050014) #24 ASAP1 (ENSHGLG00000010778) #25 ENSHGLG00000006351 #27 ENSHGLG00000035028 ENSHGLG00000033561 ENSHGLG00000034097 ENSHGLG00000019086 #29 ENSHGLG00000016070 #30 HHLA1 (ENSHGLG00000014927) #31 KCNQ3 (ENSHGLG00000011144) #32 ENSHGLG00000046229 DNAAF11 (ENSHGLG00000007769) #34 TMEM71 (ENSHGLG00000006758) #35 ENSHGLG00000000785 Tree shrew MODERN SPECIES 9134 MYC (ENSTBEG00000005715) ##22 Boreoeutheria ANCESTRAL SPECIES 19 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00940000155285.b.a.b ##22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000177637 ENSGT00940000156215.e.b ##36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000155285.b.a.b ##22 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155285.b.a.b ##22 Common shrew MODERN SPECIES 8725 MYC (ENSSARG00000010372) ##22 Hedgehog MODERN SPECIES 15131 MYC (ENSEEUG00000001458) ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000155285.b.a.b ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000155285.b.a.b ##22 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000155285.b.a.b ##22 Chiroptera ANCESTRAL SPECIES ENSGT00940000155285.b.a.b ##22 Microchiroptera ANCESTRAL SPECIES ENSGT00940000155285.b.a.b ##22 Microbat MODERN SPECIES 1050 RUNX1T1 (ENSMLUG00000004595) SLC26A7 (ENSMLUG00000003742) ENSMLUG00000023522 OTUD6B (ENSMLUG00000016954) SNTG1 (ENSMLUG00000011379) PCMTD1 (ENSMLUG00000002277) MYC (ENSMLUG00000026933) ##22 ENSMLUG00000027632 ENSMLUG00000029252 #23 ENSMLUG00000026948 #23 ENSMLUG00000008520 #23 CYRIB (ENSMLUG00000011305) #24 ASAP1 (ENSMLUG00000009025) #25 ADCY8 (ENSMLUG00000012194) #27 ENSMLUG00000022216 #29 ENSMLUG00000015388 #32 DNAAF11 (ENSMLUG00000008252) #34 TMEM71 (ENSMLUG00000001510) #35 ENSMLUG00000030437 PHF20L1 (ENSMLUG00000001525) ##36 SLA (ENSMLUG00000011145) ENSMLUG00000001528 #37 Euarchontoglires ANCESTRAL SPECIES 19 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00940000155285.b.a.b ##22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000177637 ENSGT00940000156215.e.b ##36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Primates ANCESTRAL SPECIES ENSGT00940000155285.b.a.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00940000155285.b.a.b ##22 Tarsier MODERN SPECIES 5080 MYC (ENSTSYG00000025705) ##22 Euarchontoglires_A ANCESTRAL SPECIES 19 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00940000155285.b.a.b ##22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000177637 ENSGT00940000156215.e.b ##36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Glires ANCESTRAL SPECIES 20 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00940000155285.b.a.b ##22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000177637 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Lagomorpha ANCESTRAL SPECIES 46 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.a.b ##22 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000177637 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Rabbit MODERN SPECIES 14 ENSOCUG00000029848 TRMT12 (ENSOCUG00000026379) RNF139 (ENSOCUG00000017399) #8 TATDN1 (ENSOCUG00000017403) #9 NDUFB9 (ENSOCUG00000025074) #10 MTSS1 (ENSOCUG00000008102) #11 ENSOCUG00000030136 ZNF572 (ENSOCUG00000039324) #12 SQLE (ENSOCUG00000015771) #13 WASHC5 (ENSOCUG00000015785) #14 NSMCE2 (ENSOCUG00000008539) #15 ENSOCUG00000030414 TRIB1 (ENSOCUG00000024295) #16 ENSOCUG00000037909 LRATD2 (ENSOCUG00000003500) #18 MYC (ENSOCUG00000014289) ##22 ENSOCUG00000000506 ENSOCUG00000025215 ENSOCUG00000038124 ENSOCUG00000024677 ENSOCUG00000021577 ##23 ENSOCUG00000013690 #24 ASAP1 (ENSOCUG00000002414) #25 ADCY8 (ENSOCUG00000002685) #27 ENSOCUG00000030310 ENSOCUG00000039078 ENSOCUG00000023866 ENSOCUG00000032952 EFR3A (ENSOCUG00000009294) #29 OC90 (ENSOCUG00000012033) #30 KCNQ3 (ENSOCUG00000012036) #32 Pika MODERN SPECIES 10455 MYC (ENSOPRG00000011259) ##22 Rodentia ANCESTRAL SPECIES 19 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00940000155285.b.a.b ##22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215.f #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Rodentia_B ANCESTRAL SPECIES ENSGT00940000155285.b.a.b ##22 Kangaroo rat MODERN SPECIES 401 Sqle (ENSDORG00000009191) #13 Washc5 (ENSDORG00000009194) #14 Nsmce2 (ENSDORG00000009203) #15 ENSDORG00000027319 #16 Lratd2 (ENSDORG00000016473) #18 ENSDORG00000029610 ENSDORG00000023556 ENSDORG00000010277 ##22 Cyrib (ENSDORG00000005160) #24 Asap1 (ENSDORG00000012007) #25 Adcy8 (ENSDORG00000006484) #27 Efr3a (ENSDORG00000013722) #29 Oc90 (ENSDORG00000013727) #30 ENSDORG00000027098 #31 Kcnq3 (ENSDORG00000004042) #32 Dnaaf11 (ENSDORG00000007605) #34 Tmem71 (ENSDORG00000007609) #35 ENSDORG00000029798 #36 Sla (ENSDORG00000007617) ENSDORG00000023864 #37 Ccn4 (ENSDORG00000025677) ENSDORG00000016104 St3gal1 (ENSDORG00000005921) Myomorpha ANCESTRAL SPECIES ENSGT00940000155285.b.a.b ##22 Muroidea ANCESTRAL SPECIES ENSGT00940000155285.b.a.b ##22 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00730000111276 ENSGT00940000156621 ENSGT00390000008519 ENSGT00940000162046 ENSGT00390000002738.a ENSGT00390000016543 ENSGT00390000016002 ENSGT00940000153116.C.a ENSGT00940000153116.D ENSGT00940000163282 ENSGT01050000244868.a.a.b.b.a.b ENSGT01050000244868.a.a.b.b.a.a ENSGT01050000244868.a.a.b.b.b.b ENSGT01050000244868.a.a.b.b.b.a ENSGT01050000244868.a.a.a.a.a.b.g.a ENSGT00940000155285.b.a.b ##22 ENSGT01050000244868.a.a.a.a.a.b.g.b ENSGT01050000244868.a.a.a.a.a.a ENSGT01050000244868.a.a.a.b.a.a.a ENSGT00850000133605 ENSGT00950000182858.B.a.c ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00390000000656 ENSGT00940000156880 ENSGT00950000182975.a.a.b ENSGT00390000014658 ENSGT00940000159244 ENSGT00560000078707 ENSGT00940000160316 ENSGT00940000159734 ENSGT00530000065015 Murinae ANCESTRAL SPECIES 1 ENSGT00440000034309 ENSGT00730000111276 ENSGT00940000156621 ENSGT00390000008519 ENSGT00940000162046 ENSGT00390000002738.a ENSGT00390000016543 ENSGT00390000016002 ENSGT00940000153116.C.a ENSGT00940000153116.D ENSGT01050000244868.a.a.b.b.a.b ENSGT01050000244868.a.a.b.b.a.a ENSGT01050000244868.a.a.b.b.b.b ENSGT01050000244868.a.a.b.b.b.a ENSGT01050000244868.a.a.a.a.a.b.g.a ENSGT00940000155285.b.a.b ##22 ENSGT01050000244868.a.a.a.a.a.b.g.b ENSGT01050000244868.a.a.a.a.a.a ENSGT01050000244868.a.a.a.b.a.a.a ENSGT00850000133605 ENSGT00950000182858.B.a.c ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00390000000656 ENSGT00940000156880 ENSGT00950000182975.a.a.b ENSGT00390000014658 ENSGT00940000159244 ENSGT00560000078707 ENSGT00940000160316 ENSGT00940000159734 ENSGT00530000065015 Mus ANCESTRAL SPECIES 1 ENSGT00440000034309 ENSGT00730000111276 ENSGT00940000156621 ENSGT00390000008519 ENSGT00940000162046 ENSGT00390000002738.a ENSGT00390000016543 ENSGT00390000016002 ENSGT00940000153116.C.a ENSGT00940000153116.D ENSGT01050000244868.a.a.b.b.a.b ENSGT01050000244868.a.a.b.b.a.a ENSGT01050000244868.a.a.b.b.b.b ENSGT01050000244868.a.a.b.b.b.a ENSGT01050000244868.a.a.a.a.a.b.g.a ENSGT00940000155285.b.a.b ##22 ENSGT01050000244868.a.a.a.a.a.b.g.b ENSGT01050000244868.a.a.a.a.a.a ENSGT01050000244868.a.a.a.b.a.a.a ENSGT00850000133605 ENSGT00950000182858.B.a.c ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00390000000656 ENSGT00940000156880 ENSGT00950000182975.a.a.b ENSGT00390000014658 ENSGT00940000159244 ENSGT00560000078707 ENSGT00940000160316 ENSGT00940000159734 ENSGT00530000065015 Mus_A ANCESTRAL SPECIES ENSGT00440000034309 ENSGT00730000111276 ENSGT00940000156621 ENSGT00390000008519 ENSGT00940000162046 ENSGT00390000002738.a ENSGT00390000016543 ENSGT00390000016002 ENSGT00940000153116.C.a ENSGT00940000153116.D ENSGT01050000244868.a.a.b.b.a.b ENSGT01050000244868.a.a.b.b.a.a ENSGT01050000244868.a.a.b.b.b.b ENSGT01050000244868.a.a.b.b.b.a ENSGT01050000244868.a.a.a.a.a.b.g.a ENSGT00940000155285.b.a.b ##22 ENSGT01050000244868.a.a.a.a.a.b.g.b ENSGT01050000244868.a.a.a.a.a.a ENSGT01050000244868.a.a.a.b.a.a.a ENSGT00850000133605 ENSGT00950000182858.B.a.c ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00390000000656 ENSGT00940000156880 ENSGT00950000182975.a.a.b ENSGT00390000014658 ENSGT00940000159244 ENSGT00560000078707 ENSGT00940000160316 ENSGT00940000159734 ENSGT00530000065015 Mus_B ANCESTRAL SPECIES 1 ENSGT00440000034309 ENSGT00730000111276 ENSGT00940000156621 ENSGT00390000008519 ENSGT00940000162046 ENSGT00390000002738.a ENSGT00390000016543 ENSGT00390000016002 ENSGT00940000153116.C.a ENSGT00940000153116.D ENSGT01050000244868.a.a.b.b.a.b ENSGT01050000244868.a.a.b.b.a.a ENSGT01050000244868.a.a.b.b.b.b ENSGT01050000244868.a.a.b.b.b.a ENSGT01050000244868.a.a.a.a.a.b.g.a ENSGT00940000155285.b.a.b ##22 ENSGT01050000244868.a.a.a.a.a.b.g.b ENSGT01050000244868.a.a.a.a.a.a ENSGT01050000244868.a.a.a.b.a.a.a ENSGT00850000133605 ENSGT00950000182858.B.a.c ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00390000000656 ENSGT00940000156880 ENSGT00950000182975.a.a.b ENSGT00390000014658 ENSGT00940000159244 ENSGT00560000078707 ENSGT00940000160316 ENSGT00940000159734 ENSGT00530000065015 Mouse MODERN SPECIES 11 Fbxw5 (ENSMUSG00000015095) Traf2 (ENSMUSG00000026942) Edf1 (ENSMUSG00000015092) Mamdc4 (ENSMUSG00000026941) Phpt1 (ENSMUSG00000036504) Ajm1 (ENSMUSG00000029419) Rabl6 (ENSMUSG00000015087) Ccdc183 (ENSMUSG00000026940) Tmem141 (ENSMUSG00000026939) Fcna (ENSMUSG00000026938) Lcn8 (ENSMUSG00000036449) Lcn5 (ENSMUSG00000026937) Lcn6 (ENSMUSG00000045684) Lcn10 (ENSMUSG00000047356) Obp2a (ENSMUSG00000062061) Bmyc (ENSMUSG00000049086) ##22 Obp2b (ENSMUSG00000079539) Lcn3 (ENSMUSG00000026936) Lcn11 (ENSMUSG00000069080) Gm13539 (ENSMUSG00000085484) Glt6d1 (ENSMUSG00000036401) Lcn9 (ENSMUSG00000023210) Sohlh1 (ENSMUSG00000059625) Kcnt1 (ENSMUSG00000058740) Camsap1 (ENSMUSG00000026933) Ubac1 (ENSMUSG00000036352) Nacc2 (ENSMUSG00000026932) Tmem250-ps (ENSMUSG00000087679) Lhx3 (ENSMUSG00000026934) Qsox2 (ENSMUSG00000036327) Ccdc187 (ENSMUSG00000048038) Mus_C ANCESTRAL SPECIES ENSGT00440000034309 ENSGT00730000111276 ENSGT00940000156621 ENSGT00390000008519 ENSGT00940000162046 ENSGT00390000002738.a ENSGT00390000016543 ENSGT00390000016002 ENSGT00940000153116.C.a ENSGT00940000153116.D ENSGT01050000244868.a.a.b.b.a.b ENSGT01050000244868.a.a.b.b.a.a ENSGT01050000244868.a.a.b.b.b.b ENSGT01050000244868.a.a.b.b.b.a ENSGT01050000244868.a.a.a.a.a.b.g.a ENSGT00940000155285.b.a.b ##22 ENSGT01050000244868.a.a.a.a.a.b.g.b ENSGT01050000244868.a.a.a.a.a.a ENSGT01050000244868.a.a.a.b.a.a.a ENSGT00850000133605 ENSGT00950000182858.B.a.c ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00390000000656 ENSGT00940000156880 ENSGT00950000182975.a.a.b ENSGT00390000014658 ENSGT00940000159244 ENSGT00560000078707 ENSGT00940000160316 ENSGT00940000159734 ENSGT00530000065015 Steppe mouse MODERN SPECIES 1570 ENSMSIG00000029611 Bmyc (ENSMSIG00000029608) ##22 Obp2b (ENSMSIG00000029602) spretus MODERN SPECIES 11 Fbxw5 (MGP_SPRETEiJ_G0024197) Traf2 (MGP_SPRETEiJ_G0024198) Edf1 (MGP_SPRETEiJ_G0024199) Mamdc4 (MGP_SPRETEiJ_G0024200) Phpt1 (MGP_SPRETEiJ_G0024201) Ajm1 (MGP_SPRETEiJ_G0024202) Rabl6 (MGP_SPRETEiJ_G0024203) Ccdc183 (MGP_SPRETEiJ_G0024204) Tmem141 (MGP_SPRETEiJ_G0024205) Fcna (MGP_SPRETEiJ_G0024206) Lcn8 (MGP_SPRETEiJ_G0024207) Lcn5 (MGP_SPRETEiJ_G0024208) Lcn6 (MGP_SPRETEiJ_G0024209) Lcn10 (MGP_SPRETEiJ_G0024210) Obp2a (MGP_SPRETEiJ_G0024211) Bmyc (MGP_SPRETEiJ_G0024212) ##22 Obp2b (MGP_SPRETEiJ_G0024213) Lcn3 (MGP_SPRETEiJ_G0024214) Lcn11 (MGP_SPRETEiJ_G0024215) Glt6d1 (MGP_SPRETEiJ_G0024216) Lcn9 (MGP_SPRETEiJ_G0024217) Sohlh1 (MGP_SPRETEiJ_G0024218) Kcnt1 (MGP_SPRETEiJ_G0024219) Camsap1 (MGP_SPRETEiJ_G0024220) Ubac1 (MGP_SPRETEiJ_G0024221) Nacc2 (MGP_SPRETEiJ_G0024222) Lhx3 (MGP_SPRETEiJ_G0024223) Qsox2 (MGP_SPRETEiJ_G0024224) MGP_SPRETEiJ_G0024225 MGP_SPRETEiJ_G0024226 Gpsm1 (MGP_SPRETEiJ_G0024227) Ryukyu mouse MODERN SPECIES 11 Fbxw5 (MGP_CAROLIEiJ_G0023280) Traf2 (MGP_CAROLIEiJ_G0023281) Edf1 (MGP_CAROLIEiJ_G0023282) Mamdc4 (MGP_CAROLIEiJ_G0023283) Phpt1 (MGP_CAROLIEiJ_G0023284) Ajm1 (MGP_CAROLIEiJ_G0023285) Rabl6 (MGP_CAROLIEiJ_G0023286) Ccdc183 (MGP_CAROLIEiJ_G0023287) Tmem141 (MGP_CAROLIEiJ_G0023288) Fcna (MGP_CAROLIEiJ_G0023289) Lcn8 (MGP_CAROLIEiJ_G0023290) Lcn5 (MGP_CAROLIEiJ_G0023291) Lcn6 (MGP_CAROLIEiJ_G0023292) Lcn10 (MGP_CAROLIEiJ_G0023293) Obp2a (MGP_CAROLIEiJ_G0023294) Bmyc (MGP_CAROLIEiJ_G0023295) ##22 Obp2b (MGP_CAROLIEiJ_G0023296) Lcn3 (MGP_CAROLIEiJ_G0023297) Lcn11 (MGP_CAROLIEiJ_G0023298) Glt6d1 (MGP_CAROLIEiJ_G0023299) Lcn9 (MGP_CAROLIEiJ_G0023300) Sohlh1 (MGP_CAROLIEiJ_G0023301) Kcnt1 (MGP_CAROLIEiJ_G0023302) Camsap1 (MGP_CAROLIEiJ_G0023303) Ubac1 (MGP_CAROLIEiJ_G0023304) Nacc2 (MGP_CAROLIEiJ_G0023305) Lhx3 (MGP_CAROLIEiJ_G0023306) Qsox2 (MGP_CAROLIEiJ_G0023307) MGP_CAROLIEiJ_G0023308 MGP_CAROLIEiJ_G0023309 Gpsm1 (MGP_CAROLIEiJ_G0023310) Shrew mouse MODERN SPECIES 16 C8g (MGP_PahariEiJ_G0024737) Fbxw5 (MGP_PahariEiJ_G0024738) Traf2 (MGP_PahariEiJ_G0024739) Mamdc4 (MGP_PahariEiJ_G0024741) Phpt1 (MGP_PahariEiJ_G0024742) Ajm1 (MGP_PahariEiJ_G0024743) Rabl6 (MGP_PahariEiJ_G0024744) Ccdc183 (MGP_PahariEiJ_G0024745) Tmem141 (MGP_PahariEiJ_G0024746) MGP_PahariEiJ_G0024747 Lcn8 (MGP_PahariEiJ_G0024748) Lcn5 (MGP_PahariEiJ_G0024749) Lcn6 (MGP_PahariEiJ_G0024750) Lcn10 (MGP_PahariEiJ_G0024751) Obp2a (MGP_PahariEiJ_G0024752) Bmyc (MGP_PahariEiJ_G0024753) ##22 Lcn3 (MGP_PahariEiJ_G0024754) Lcn11 (MGP_PahariEiJ_G0024755) Glt6d1 (MGP_PahariEiJ_G0024756) Lcn9 (MGP_PahariEiJ_G0024757) Sohlh1 (MGP_PahariEiJ_G0024758) Kcnt1 (MGP_PahariEiJ_G0024759) Camsap1 (MGP_PahariEiJ_G0024760) Ubac1 (MGP_PahariEiJ_G0024761) Nacc2 (MGP_PahariEiJ_G0024762) Lhx3 (MGP_PahariEiJ_G0024763) MGP_PahariEiJ_G0024764 MGP_PahariEiJ_G0024765 MGP_PahariEiJ_G0024766 Gpsm1 (MGP_PahariEiJ_G0024767) Dnlz (MGP_PahariEiJ_G0024768) Rat MODERN SPECIES 13 Ptgds (ENSRNOG00000015550) C8g (ENSRNOG00000028701) Fbxw5 (ENSRNOG00000028674) Traf2 (ENSRNOG00000006238) Edf1 (ENSRNOG00000016272) Ajm1 (ENSRNOG00000033863) Rabl6 (ENSRNOG00000016795) Ccdc183 (ENSRNOG00000017044) Tmem141 (ENSRNOG00000028254) Fcna (ENSRNOG00000017063) Lcn8 (ENSRNOG00000017161) Lcn5 (ENSRNOG00000058597) Lcn6 (ENSRNOG00000028095) Lcn10 (ENSRNOG00000028074) Obp2a (ENSRNOG00000042407) Bmyc (ENSRNOG00000042556) ##22 Paep (ENSRNOG00000070613) Lcn3 (ENSRNOG00000063072) LOC108348196 (ENSRNOG00000064942) AABR07051244.1 (ENSRNOG00000047422) ENSRNOG00000067005 Obp2b (ENSRNOG00000048417) LOC108348105 (ENSRNOG00000064907) Lcn15l1 (ENSRNOG00000062998) Glt6d1 (ENSRNOG00000027900) Lcn9 (ENSRNOG00000027821) Sohlh1 (ENSRNOG00000033983) Kcnt1 (ENSRNOG00000017283) Camsap1 (ENSRNOG00000017883) Ubac1 (ENSRNOG00000017983) Nacc2 (ENSRNOG00000018231) Cricetidae ANCESTRAL SPECIES 12 ENSGT00940000156621 ENSGT00390000008519.lb ENSGT00940000162046 ENSGT00390000002738.a ENSGT00390000016543 ENSGT00390000016002 ENSGT00940000163544 ENSGT00940000153116.C.a ENSGT00940000153116.D ENSGT00940000163282 ENSGT01050000244868.a.a.b.b.a.b ENSGT01050000244868.a.a.b.b.a.a ENSGT01050000244868.a.a.b.b.b.b ENSGT01050000244868.a.a.b.b.b.a ENSGT01050000244868.a.a.a.a.a.b.g.a ENSGT00940000155285.b.a.b ##22 ENSGT01050000244868.a.a.a.a.a.b.g.b ENSGT01050000244868.a.a.a.a.a.a ENSGT01050000244868.a.a.a.b.a.a.a ENSGT00850000133605 ENSGT00950000182858.B.a.c ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00390000000656 ENSGT00940000156880 ENSGT00950000182975.a.a.b ENSGT00390000014658 ENSGT00940000159244 ENSGT00560000078707 ENSGT00940000160316 ENSGT00940000159734 ENSGT00530000065015 Cricetinae ANCESTRAL SPECIES 1 ENSGT00940000156621 ENSGT00390000008519.lb ENSGT00940000162046 ENSGT00390000002738.a ENSGT00390000016543 ENSGT00390000016002 ENSGT00940000163544 ENSGT00940000153116.C.a ENSGT00940000153116.D ENSGT00940000163282 ENSGT01050000244868.a.a.b.b.a.b ENSGT01050000244868.a.a.b.b.a.a ENSGT01050000244868.a.a.b.b.b.b ENSGT01050000244868.a.a.b.b.b.a ENSGT01050000244868.a.a.a.a.a.b.g.a ENSGT00940000155285.b.a.b ##22 ENSGT01050000244868.a.a.a.a.a.b.g.b ENSGT01050000244868.a.a.a.a.a.a ENSGT01050000244868.a.a.a.b.a.a.a ENSGT00850000133605 ENSGT00950000182858.B.a.c ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00390000000656 ENSGT00940000156880 ENSGT00950000182975.a.a.b ENSGT00390000014658 ENSGT00940000159244 ENSGT00560000078707 ENSGT00940000160316 ENSGT00940000159734 ENSGT00530000065015 Chinese hamster chok1gshd MODERN SPECIES 188 C8g (ENSCGRG00001002546) Fbxw5 (ENSCGRG00001006453) Traf2 (ENSCGRG00001016324) Edf1 (ENSCGRG00001010405) Mamdc4 (ENSCGRG00001011748) Phpt1 (ENSCGRG00001009448) Ajm1 (ENSCGRG00001010678) Rabl6 (ENSCGRG00001012876) ENSCGRG00001013894 Tmem141 (ENSCGRG00001016826) Fcna (ENSCGRG00001017135) Lcn8 (ENSCGRG00001018088) Lcn6 (ENSCGRG00001020343) Lcn10 (ENSCGRG00001020675) Obp2a (ENSCGRG00001018049) Bmyc (ENSCGRG00001008874) ##22 Obp2b (ENSCGRG00001016137) Lcn3 (ENSCGRG00001012012) Lcn11 (ENSCGRG00001017001) Gm13539 (ENSCGRG00001019178) Glt6d1 (ENSCGRG00001015245) Lcn9 (ENSCGRG00001014161) Sohlh1 (ENSCGRG00001015036) Kcnt1 (ENSCGRG00001021564) Camsap1 (ENSCGRG00001013972) Ubac1 (ENSCGRG00001020637) Nacc2 (ENSCGRG00001012321) Tmem250-ps (ENSCGRG00001007569) Lhx3 (ENSCGRG00001019384) Qsox2 (ENSCGRG00001019767) ENSCGRG00001022133 Golden Hamster MODERN SPECIES 771 Fbxw5 (ENSMAUG00000016532) Traf2 (ENSMAUG00000000898) ENSMAUG00000013857 Mamdc4 (ENSMAUG00000018382) Phpt1 (ENSMAUG00000016521) Ajm1 (ENSMAUG00000012200) Rabl6 (ENSMAUG00000016473) Ccdc183 (ENSMAUG00000006655) Tmem141 (ENSMAUG00000020990) ENSMAUG00000020786 Lcn8 (ENSMAUG00000007185) ENSMAUG00000006492 Lcn6 (ENSMAUG00000004084) Lcn10 (ENSMAUG00000001034) Obp2a (ENSMAUG00000019585) Bmyc (ENSMAUG00000008342) ##22 Obp2b (ENSMAUG00000021860) Lcn3 (ENSMAUG00000012952) Lcn11 (ENSMAUG00000019467) Gm13539 (ENSMAUG00000013893) Glt6d1 (ENSMAUG00000017647) Lcn9 (ENSMAUG00000020156) Sohlh1 (ENSMAUG00000019543) Kcnt1 (ENSMAUG00000002050) ENSMAUG00000018268 ENSMAUG00000006623 Ubac1 (ENSMAUG00000009990) Nacc2 (ENSMAUG00000019689) Tmem250-ps (ENSMAUG00000016832) Lhx3 (ENSMAUG00000016447) Qsox2 (ENSMAUG00000002434) Cricetidae_B ANCESTRAL SPECIES 7 ENSGT00990000203858 ENSGT00730000111276 ENSGT00940000156621 ENSGT00390000008519.lb ENSGT00940000162046 ENSGT00390000002738.a ENSGT00390000016543 ENSGT00390000016002 ENSGT00940000163544 ENSGT00940000153116.C.a ENSGT00940000153116.D ENSGT01050000244868.a.a.b.b.a.b ENSGT01050000244868.a.a.b.b.b.b ENSGT01050000244868.a.a.b.b.b.a ENSGT01050000244868.a.a.a.a.a.b.g.a ENSGT00940000155285.b.a.b ##22 ENSGT01050000244868.a.a.a.a.a.b.g.b ENSGT01050000244868.a.a.a.a.a.a ENSGT01050000244868.a.a.a.b.a.a.a ENSGT00850000133605 ENSGT00950000182858.B.a.c ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00390000000656 ENSGT00940000156880 ENSGT00950000182975.a.a.b ENSGT00390000014658 ENSGT00940000159244 ENSGT00560000078707 ENSGT00940000160316 ENSGT00940000159734 ENSGT00530000065015 Prairie vole MODERN SPECIES 12 C8g (ENSMOCG00000021565) Fbxw5 (ENSMOCG00000017562) Traf2 (ENSMOCG00000019498) ENSMOCG00000013973 Edf1 (ENSMOCG00000007658) Mamdc4 (ENSMOCG00000013367) Phpt1 (ENSMOCG00000016133) Ajm1 (ENSMOCG00000018216) Rabl6 (ENSMOCG00000019161) ENSMOCG00000016398 Tmem141 (ENSMOCG00000014898) Lcn8 (ENSMOCG00000016298) Lcn6 (ENSMOCG00000017383) Lcn10 (ENSMOCG00000003154) Obp2a (ENSMOCG00000020697) Bmyc (ENSMOCG00000001390) ##22 Lcn3 (ENSMOCG00000007007) Lcn11 (ENSMOCG00000003465) Gm13539 (ENSMOCG00000016191) Glt6d1 (ENSMOCG00000011730) Lcn9 (ENSMOCG00000011307) Sohlh1 (ENSMOCG00000005551) Kcnt1 (ENSMOCG00000003727) Camsap1 (ENSMOCG00000016921) Ubac1 (ENSMOCG00000004758) ENSMOCG00000017360 Nacc2 (ENSMOCG00000016088) Tmem250-ps (ENSMOCG00000014787) Lhx3 (ENSMOCG00000002906) Qsox2 (ENSMOCG00000022455) ENSMOCG00000015098 Northern American deer mouse MODERN SPECIES 17 Traf2 (ENSPEMG00000011629) Edf1 (ENSPEMG00000018336) Mamdc4 (ENSPEMG00000018709) Phpt1 (ENSPEMG00000025181) Ajm1 (ENSPEMG00000012270) Rabl6 (ENSPEMG00000001339) Ccdc183 (ENSPEMG00000016573) Tmem141 (ENSPEMG00000008373) Fcna (ENSPEMG00000014811) Lcn8 (ENSPEMG00000014298) Lcn5 (ENSPEMG00000000579) ENSPEMG00000016220 Lcn6 (ENSPEMG00000008537) Lcn10 (ENSPEMG00000013650) Obp2a (ENSPEMG00000007940) Bmyc (ENSPEMG00000026709) ##22 Obp2b (ENSPEMG00000012251) ENSPEMG00000030869 Lcn3 (ENSPEMG00000010043) Lcn11 (ENSPEMG00000017847) Gm13539 (ENSPEMG00000013713) Glt6d1 (ENSPEMG00000013013) Lcn9 (ENSPEMG00000011475) Sohlh1 (ENSPEMG00000011915) Kcnt1 (ENSPEMG00000004851) Camsap1 (ENSPEMG00000012617) Ubac1 (ENSPEMG00000017388) Nacc2 (ENSPEMG00000011424) Tmem250-ps (ENSPEMG00000025479) Lhx3 (ENSPEMG00000009629) Qsox2 (ENSPEMG00000009284) Atlantogenata ANCESTRAL SPECIES 20 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 Xenarthra ANCESTRAL SPECIES 1884 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 Armadillo MODERN SPECIES 1549 LRATD2 (ENSDNOG00000005070) #18 MYC (ENSDNOG00000048399) #22 Afrotheria ANCESTRAL SPECIES 10 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Afrotheria_a ANCESTRAL SPECIES 10 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00940000153304.A ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00950000183140.a.a.m.a.a.b #23 ENSGT00950000183140.a.a.m.a.a.a ##23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Elephant MODERN SPECIES 567 FBXO32 (ENSLAFG00000003343) KLHL38 (ENSLAFG00000003345) ANXA13 (ENSLAFG00000008362) FAM91A1 (ENSLAFG00000008368) FER1L6 (ENSLAFG00000016920) TRMT12 (ENSLAFG00000012519) RNF139 (ENSLAFG00000030934) #8 TATDN1 (ENSLAFG00000012220) #9 NDUFB9 (ENSLAFG00000012224) #10 MTSS1 (ENSLAFG00000012227) #11 SQLE (ENSLAFG00000003760) #13 WASHC5 (ENSLAFG00000003762) #14 NSMCE2 (ENSLAFG00000014786) #15 TRIB1 (ENSLAFG00000012712) #16 LRATD2 (ENSLAFG00000007398) #18 MYC (ENSLAFG00000001410) #22 ENSLAFG00000009620 #23 ENSLAFG00000008615 ##23 ENSLAFG00000001205 #24 ASAP1 (ENSLAFG00000001748) #25 ADCY8 (ENSLAFG00000009118) #27 EFR3A (ENSLAFG00000017622) #29 OC90 (ENSLAFG00000005087) #30 HHLA1 (ENSLAFG00000027750) #31 KCNQ3 (ENSLAFG00000005689) #32 DNAAF11 (ENSLAFG00000004600) #34 TMEM71 (ENSLAFG00000009515) #35 PHF20L1 (ENSLAFG00000006105) #36 TG (ENSLAFG00000012474) #37 SLA (ENSLAFG00000013718) CCN4 (ENSLAFG00000002835) Hyrax MODERN SPECIES 10386 MYC (ENSPCAG00000008554) #22 Marsupialia ANCESTRAL SPECIES 1 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00950000183140.a.a.m.a.a.b.p #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Opossum MODERN SPECIES 2 ENSMODG00000001863 ENSMODG00000042266 RNF139 (ENSMODG00000001847) #8 TATDN1 (ENSMODG00000001840) #9 NDUFB9 (ENSMODG00000049785) #10 MTSS1 (ENSMODG00000001828) #11 ZNF572 (ENSMODG00000001814) #12 SQLE (ENSMODG00000001811) #13 WASHC5 (ENSMODG00000001800) #14 NSMCE2 (ENSMODG00000027668) #15 ENSMODG00000051380 ENSMODG00000047243 TRIB1 (ENSMODG00000001741) #16 ENSMODG00000039491 LRATD2 (ENSMODG00000024442) #18 MYC (ENSMODG00000001735) #22 ENSMODG00000040938 ENSMODG00000001653 #23 ENSMODG00000001689 #23 ENSMODG00000001632 #23 CYRIB (ENSMODG00000001594) #24 ASAP1 (ENSMODG00000001522) #25 ENSMODG00000044456 ENSMODG00000029213 ADCY8 (ENSMODG00000001430) #27 ENSMODG00000041290 ENSMODG00000038218 ENSMODG00000048352 ENSMODG00000047684 ENSMODG00000050129 EFR3A (ENSMODG00000001307) #29 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00950000183140.a.a.m.a.a.b.p #23 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 ENSGT00950000182872.f.a.b Diprotodontia ANCESTRAL SPECIES 36 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 ENSGT00940000156658 Diprotodontia_a ANCESTRAL SPECIES 35 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00940000162935 #12 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 ENSGT00940000156658 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1146 ENSVURG00010011328 ENSVURG00010011467 #7 ENSVURG00010011477 #8 ENSVURG00010011488 #9 ENSVURG00010011549 #10 ENSVURG00010011562 #11 ENSVURG00010011575 #12 ENSVURG00010011581 #13 ENSVURG00010011606 #14 ENSVURG00010011632 #15 ENSVURG00010011643 ENSVURG00010011648 #16 ENSVURG00010011661 #18 ENSVURG00010011669 #22 ENSVURG00010011678 ENSVURG00010011692 #24 ENSVURG00010011721 #25 ENSVURG00010011799 #27 EFR3A (ENSVURG00010012423) #29 KCNQ3 (ENSVURG00010012446) #32 DNAAF11 (ENSVURG00010012481) #34 ENSVURG00010012513 #35 PHF20L1 (ENSVURG00010012542) #36 TG (ENSVURG00010012634) #37 SLA (ENSVURG00010013277) CCN4 (ENSVURG00010013284) NDRG1 (ENSVURG00010013298) ST3GAL1 (ENSVURG00010013340) ENSVURG00010013369 Common wonbat MODERN SPECIES 1146 CCN4 (ENSVURG00010013284) NDRG1 (ENSVURG00010013298) ST3GAL1 (ENSVURG00010013340) ENSVURG00010013369 ENSVURG00010013443 #7 ENSVURG00010013447 #8 ENSVURG00010013451 #9 ENSVURG00010013458 #10 ENSVURG00010013474 #11 ENSVURG00010013490 #12 ENSVURG00010013502 #13 ENSVURG00010013531 #14 ENSVURG00010013553 #15 ENSVURG00010013557 #16 ENSVURG00010013568 #18 ENSVURG00010013579 #22 ENSVURG00010013593 ENSVURG00010013616 #24 ENSVURG00010013690 #25 ENSVURG00010013737 #27 koala MODERN SPECIES 69 LRATD2 (ENSPCIG00000013931) #18 ENSPCIG00000007021 MYC (ENSPCIG00000005677) #22 CYRIB (ENSPCIG00000016855) #24 ENSPCIG00000016875 ASAP1 (ENSPCIG00000016862) #25 ADCY8 (ENSPCIG00000004336) #27 EFR3A (ENSPCIG00000010958) #29 OC90 (ENSPCIG00000010955) #30 KCNQ3 (ENSPCIG00000010933) #32 DNAAF11 (ENSPCIG00000010928) #34 PHF20L1 (ENSPCIG00000010922) #36 SLA (ENSPCIG00000024901) TG (ENSPCIG00000032610) #37 CCN4 (ENSPCIG00000024902) NDRG1 (ENSPCIG00000024903) ST3GAL1 (ENSPCIG00000024904) ZFAT (ENSPCIG00000013394) Wallaby MODERN SPECIES 4363 ENSMEUG00000006124 #22 Tasmanian devil MODERN SPECIES ANXA13 (ENSSHAG00000015060) FAM91A1 (ENSSHAG00000015463) FER1L6 (ENSSHAG00000005543) TMEM65 (ENSSHAG00000029529) #7 ENSSHAG00000027072 RNF139 (ENSSHAG00000006820) #8 ENSSHAG00000007003 #9 NDUFB9 (ENSSHAG00000026400) #10 MTSS1 (ENSSHAG00000031768) #11 ZNF572 (ENSSHAG00000005229) #12 SQLE (ENSSHAG00000027137) #13 WASHC5 (ENSSHAG00000006205) #14 NSMCE2 (ENSSHAG00000027589) #15 TRIB1 (ENSSHAG00000006782) #16 LRATD2 (ENSSHAG00000030244) #18 MYC (ENSSHAG00000029812) #22 ENSSHAG00000024891 #23 CYRIB (ENSSHAG00000013224) #24 ENSSHAG00000014207 #25 ADCY8 (ENSSHAG00000017165) #27 EFR3A (ENSSHAG00000003517) #29 ENSSHAG00000005694 #30 ENSSHAG00000006599 #31 KCNQ3 (ENSSHAG00000007553) #32 DNAAF11 (ENSSHAG00000011831) #34 TMEM71 (ENSSHAG00000027863) #35 PHF20L1 (ENSSHAG00000012913) #36 TG (ENSSHAG00000013480) #37 SLA (ENSSHAG00000021012) CCN4 (ENSSHAG00000015115) NDRG1 (ENSSHAG00000024700) Platypus MODERN SPECIES 15 ENSOANG00000043307 ENSOANG00000012778 KLHL38 (ENSOANG00000014083) ANXA13 (ENSOANG00000014084) FAM91A1 (ENSOANG00000014085) FER1L6 (ENSOANG00000014086) TATDN1 (ENSOANG00000014088) #9 RNF139 (ENSOANG00000014087) #8 NDUFB9 (ENSOANG00000014089) #10 MTSS1 (ENSOANG00000014090) #11 SQLE (ENSOANG00000014091) #13 WASHC5 (ENSOANG00000014093) #14 NSMCE2 (ENSOANG00000020245) #15 TRIB1 (ENSOANG00000008111) #16 LRATD2 (ENSOANG00000049595) #18 MYC (ENSOANG00000008107) #22 CYRIB (ENSOANG00000008106) #24 ASAP1 (ENSOANG00000008104) #25 ADCY8 (ENSOANG00000008103) #27 EFR3A (ENSOANG00000008102) #29 ENSOANG00000008101 #30 KCNQ3 (ENSOANG00000008100) #32 DNAAF11 (ENSOANG00000008099) #34 ENSOANG00000030173 #35 ENSOANG00000039518 #36 ENSOANG00000036376 #36 ENSOANG00000010064 #37 SLA (ENSOANG00000010066) CCN4 (ENSOANG00000010062) NDRG1 (ENSOANG00000010060) ST3GAL1 (ENSOANG00000042796) Sauria ANCESTRAL SPECIES ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000165526 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000177637 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Lepidosauria ANCESTRAL SPECIES 2 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000165526 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000177637 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Episquamata ANCESTRAL SPECIES 1 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000002417 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000156265.x.b.a.b ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000177637 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Toxicofera ANCESTRAL SPECIES 8 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000002417 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000156265.x.b.a.b ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000154435.y.a.b ENSGT00940000156215 #36 ENSGT00940000177637 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Elapidae ANCESTRAL SPECIES 8 ENSGT00390000014398 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00390000009543 ENSGT00940000159069 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000002417 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00940000154435.y.a.b ENSGT00940000156215 #36 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 ENSGT00940000156658 Elapidae_a ANCESTRAL SPECIES 44 ENSGT00390000014398 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00390000009543 ENSGT00940000159069 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000002417 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00940000164859 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00940000154435.y.a.b.d ENSGT00940000154435.y.a.b.c ENSGT00940000156215 #36 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Acanthophiinae ANCESTRAL SPECIES 15 ENSGT00390000014398 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00390000009543 ENSGT00940000159069 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000002417 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00940000164859 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00950000183010.a.b.a.a.a.a.b ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00940000154435.y.a.b.d ENSGT00940000154435.y.a.b.c ENSGT00940000156215 #36 ENSGT00940000177637 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Eastern brown snake MODERN SPECIES 22 NTAQ1 (ENSPTXG00000004168) FBXO32 (ENSPTXG00000004169) KLHL38 (ENSPTXG00000004171) FAM91A1 (ENSPTXG00000004172) FER1L6 (ENSPTXG00000004720) RNF139 (ENSPTXG00000004721) #8 TATDN1 (ENSPTXG00000004722) #9 NDUFB9 (ENSPTXG00000004723) #10 MTSS1 (ENSPTXG00000004724) #11 BBS10 (ENSPTXG00000004725) SQLE (ENSPTXG00000004729) #13 WASHC5 (ENSPTXG00000004731) #14 ENSPTXG00000004733 TRIB1 (ENSPTXG00000004735) #16 LRATD2 (ENSPTXG00000004737) #18 MYC (ENSPTXG00000004738) #22 ENSPTXG00000004739 CYRIB (ENSPTXG00000004740) #24 ASAP1 (ENSPTXG00000004742) #25 ADCY8 (ENSPTXG00000005944) #27 HHLA1 (ENSPTXG00000005945) #31 KCNQ3 (ENSPTXG00000005946) #32 DNAAF11 (ENSPTXG00000005948) #34 ENSPTXG00000005951 PHF20L1 (ENSPTXG00000005953) #36 ENSPTXG00000005955 ENSPTXG00000005957 #37 SLA (ENSPTXG00000005960) CCN4 (ENSPTXG00000005961) NDRG1 (ENSPTXG00000005962) ST3GAL1 (ENSPTXG00000005963) Mainland tiger snake MODERN SPECIES 111 KLHL38 (ENSNSUG00000001942) FAM91A1 (ENSNSUG00000001952) FER1L6 (ENSNSUG00000003164) ENSNSUG00000003168 RNF139 (ENSNSUG00000003171) #8 TATDN1 (ENSNSUG00000003174) #9 NDUFB9 (ENSNSUG00000003184) #10 MTSS1 (ENSNSUG00000003187) #11 BBS10 (ENSNSUG00000003708) SQLE (ENSNSUG00000003716) #13 WASHC5 (ENSNSUG00000003752) #14 ENSNSUG00000005487 TRIB1 (ENSNSUG00000005488) #16 ENSNSUG00000005489 ENSNSUG00000005491 MYC (ENSNSUG00000005493) #22 ENSNSUG00000005494 Blue-lipped sea krait MODERN SPECIES 5408 MYC (ENSLLTG00000009092) #22 Indian cobra MODERN SPECIES 2 FBXO32 (ENSNNAG00000017804) KLHL38 (ENSNNAG00000017824) FAM91A1 (ENSNNAG00000017828) ENSNNAG00000017834 RNF139 (ENSNNAG00000017846) #8 TATDN1 (ENSNNAG00000017848) #9 NDUFB9 (ENSNNAG00000017857) #10 MTSS1 (ENSNNAG00000017860) #11 BBS10 (ENSNNAG00000017864) SQLE (ENSNNAG00000017866) #13 WASHC5 (ENSNNAG00000017869) #14 NSMCE2 (ENSNNAG00000017871) #15 TRIB1 (ENSNNAG00000017873) #16 ENSNNAG00000017875 ENSNNAG00000017881 MYC (ENSNNAG00000017883) #22 CYRIB (ENSNNAG00000017884) #24 ADCY8 (ENSNNAG00000018206) #27 HHLA1 (ENSNNAG00000018215) #31 KCNQ3 (ENSNNAG00000018219) #32 DNAAF11 (ENSNNAG00000018223) #34 ENSNNAG00000018224 ENSNNAG00000018226 PHF20L1 (ENSNNAG00000018233) #36 SLA (ENSNNAG00000018242) ENSNNAG00000018246 #37 CCN4 (ENSNNAG00000018250) NDRG1 (ENSNNAG00000018255) ST3GAL1 (ENSNNAG00000018262) ZFAT (ENSNNAG00000018271) KHDRBS3 (ENSNNAG00000018278) Lizard MODERN SPECIES 3 ENSACAG00000009912 ENSACAG00000029248 FER1L6 (ENSACAG00000009955) TMEM65 (ENSACAG00000009965) #7 RNF139 (ENSACAG00000009979) #8 TATDN1 (ENSACAG00000009985) #9 ENSACAG00000010022 #10 MTSS1 (ENSACAG00000010026) #11 ENSACAG00000010107 SQLE (ENSACAG00000010117) #13 WASHC5 (ENSACAG00000010210) #14 NSMCE2 (ENSACAG00000010328) #15 TRIB1 (ENSACAG00000010344) #16 ENSACAG00000010355 LRATD2 (ENSACAG00000010363) #18 MYC (ENSACAG00000010372) #22 CYRIB (ENSACAG00000010376) #24 ENSACAG00000034658 ASAP1 (ENSACAG00000010415) #25 ADCY8 (ENSACAG00000010598) #27 KHDRBS3 (ENSACAG00000012042) ENSACAG00000037101 ENSACAG00000039240 ZFAT (ENSACAG00000011949) ENSACAG00000036051 ENSACAG00000035189 ENSACAG00000037979 ST3GAL1 (ENSACAG00000011882) ENSACAG00000039238 NDRG1 (ENSACAG00000011700) CCN4 (ENSACAG00000011648) Laterata ANCESTRAL SPECIES 5 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000002417 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000156265.x.b.a.b ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00940000154435.y.a.b ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Common wall lizard MODERN SPECIES 15 ENSPMRG00000017650 ENSPMRG00000017649 RNF139 (ENSPMRG00000017645) #8 TATDN1 (ENSPMRG00000017640) #9 NDUFB9 (ENSPMRG00000017626) #10 MTSS1 (ENSPMRG00000017599) #11 BBS10 (ENSPMRG00000017553) SQLE (ENSPMRG00000017536) #13 WASHC5 (ENSPMRG00000017493) #14 ENSPMRG00000017487 NSMCE2 (ENSPMRG00000017483) #15 TRIB1 (ENSPMRG00000017479) #16 ENSPMRG00000017474 ENSPMRG00000017471 LRATD2 (ENSPMRG00000017468) #18 MYC (ENSPMRG00000017466) #22 ENSPMRG00000017379 ENSPMRG00000017356 ENSPMRG00000017352 CYRIB (ENSPMRG00000017337) #24 ASAP1 (ENSPMRG00000017289) #25 ADCY8 (ENSPMRG00000017262) #27 EFR3A (ENSPMRG00000017250) #29 OC90 (ENSPMRG00000017232) #30 HHLA1 (ENSPMRG00000017224) #31 KCNQ3 (ENSPMRG00000017212) #32 ENSPMRG00000017207 DNAAF11 (ENSPMRG00000017194) #34 ENSPMRG00000017192 ENSPMRG00000017189 TMEM71 (ENSPMRG00000017182) #35 Argentine black and white tegu MODERN SPECIES 13 ENSSMRG00000021496 ENSSMRG00000021498 TMEM65 (ENSSMRG00000000583) #7 RNF139 (ENSSMRG00000000599) #8 TATDN1 (ENSSMRG00000000604) #9 ENSSMRG00000000616 #10 MTSS1 (ENSSMRG00000000630) #11 BBS10 (ENSSMRG00000000749) SQLE (ENSSMRG00000000755) #13 WASHC5 (ENSSMRG00000000800) #14 NSMCE2 (ENSSMRG00000000895) #15 TRIB1 (ENSSMRG00000000914) #16 ENSSMRG00000000942 ENSSMRG00000000980 LRATD2 (ENSSMRG00000001019) #18 MYC (ENSSMRG00000001110) #22 ENSSMRG00000001137 ENSSMRG00000001204 CYRIB (ENSSMRG00000001213) #24 ASAP1 (ENSSMRG00000001248) #25 ENSSMRG00000001314 ADCY8 (ENSSMRG00000001336) #27 ENSSMRG00000002495 #29 OC90 (ENSSMRG00000002509) #30 ENSSMRG00000002557 HHLA1 (ENSSMRG00000002573) #31 KCNQ3 (ENSSMRG00000002701) #32 DNAAF11 (ENSSMRG00000002713) #34 ENSSMRG00000002728 PHF20L1 (ENSSMRG00000002815) #36 TG (ENSSMRG00000003740) #37 tuatara MODERN SPECIES 1345 LRATD2 (ENSSPUG00000007231) #18 MYC (ENSSPUG00000007239) #22 CYRIB (ENSSPUG00000007267) #24 ENSSPUG00000007467 ASAP1 (ENSSPUG00000007614) #25 ADCY8 (ENSSPUG00000007713) #27 ENSSPUG00000007798 #29 OC90 (ENSSPUG00000007832) #30 KCNQ3 (ENSSPUG00000007864) #32 DNAAF11 (ENSSPUG00000007931) #34 TMEM71 (ENSSPUG00000008040) #35 PHF20L1 (ENSSPUG00000008093) #36 TG (ENSSPUG00000008356) #37 SLA (ENSSPUG00000009075) CCN4 (ENSSPUG00000009082) ENSSPUG00000009105 ST3GAL1 (ENSSPUG00000009162) Archelosauria ANCESTRAL SPECIES 5 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000165526 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Archosauria ANCESTRAL SPECIES ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000165526 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Australian saltwater crocodile DUPLICATION Australian saltwater crocodile MODERN SPECIES 32 LRIT3 (ENSCPRG00005005617) EGF (ENSCPRG00005005601) ELOVL6 (ENSCPRG00005005580) ENPEP (ENSCPRG00005005325) PITX1 (ENSCPRG00005005301) FAM241A (ENSCPRG00005005278) ENSCPRG00005005274 TIFA (ENSCPRG00005005271) ALPK1 (ENSCPRG00005005236) ENSCPRG00005005192 LARP7 (ENSCPRG00005005168) ANK2 (ENSCPRG00005005086) ENSCPRG00005005068 ARSJ (ENSCPRG00005005061) UGT8 (ENSCPRG00005005054) ENSCPRG00005005050 #22 NDST4 (ENSCPRG00005004945) PFN1 (ENSCPRG00005004928) NDST3 (ENSCPRG00005004913) PRSS12 (ENSCPRG00005004901) METTL14 (ENSCPRG00005004897) SEC24D (ENSCPRG00005004870) SYNPO2 (ENSCPRG00005004859) MYOZ2 (ENSCPRG00005004848) USP53 (ENSCPRG00005004843) FABP2 (ENSCPRG00005004836) PDE5A (ENSCPRG00005004828) RPL7L1 (ENSCPRG00005004817) MAD2L1 (ENSCPRG00005004810) PRDM5 (ENSCPRG00005004805) NDNF (ENSCPRG00005004799) Australian saltwater crocodile MODERN SPECIES KLHL38 (ENSCPRG00005008841) ANXA13 (ENSCPRG00005008888) FAM91A1 (ENSCPRG00005008894) FER1L6 (ENSCPRG00005008931) TMEM65 (ENSCPRG00005008990) #7 RNF139 (ENSCPRG00005009007) #8 TATDN1 (ENSCPRG00005009009) #9 NDUFB9 (ENSCPRG00005009015) #10 MTSS1 (ENSCPRG00005009029) #11 SQLE (ENSCPRG00005009064) #13 WASHC5 (ENSCPRG00005009230) #14 ENSCPRG00005009732 TRIB1 (ENSCPRG00005009748) #16 LRATD2 (ENSCPRG00005009758) #18 ENSCPRG00005009777 ENSCPRG00005009779 #22 CYRIB (ENSCPRG00005009810) #24 ENSCPRG00005009824 ASAP1 (ENSCPRG00005009896) #25 ADCY8 (ENSCPRG00005010675) #27 EFR3A (ENSCPRG00005010770) #29 OC90 (ENSCPRG00005011251) #30 HHLA1 (ENSCPRG00005011256) #31 KCNQ3 (ENSCPRG00005011299) #32 TMEM71 (ENSCPRG00005011378) #35 PHF20L1 (ENSCPRG00005011418) #36 TG (ENSCPRG00005011438) #37 SLA (ENSCPRG00005011507) CCN4 (ENSCPRG00005011570) NDRG1 (ENSCPRG00005011585) ST3GAL1 (ENSCPRG00005011684) Aves ANCESTRAL SPECIES 9 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 African ostrich MODERN SPECIES 638 RNF139 (ENSSCUG00000008667) #8 TATDN1 (ENSSCUG00000008664) #9 NDUFB9 (ENSSCUG00000008662) #10 MTSS1 (ENSSCUG00000008656) #11 SQLE (ENSSCUG00000008655) #13 WASHC5 (ENSSCUG00000008654) #14 NSMCE2 (ENSSCUG00000008653) #15 TRIB1 (ENSSCUG00000008650) #16 LRATD2 (ENSSCUG00000010071) #18 ENSSCUG00000010062 #22 CYRIB (ENSSCUG00000010026) #24 DNER (ENSSCUG00000010006) PID1 (ENSSCUG00000009995) SPHKAP (ENSSCUG00000009988) ENSSCUG00000009983 ENSSCUG00000009977 ENSSCUG00000009976 ENSSCUG00000009974 AGFG1 (ENSSCUG00000009968) MRPL44 (ENSSCUG00000009964) MFF (ENSSCUG00000009958) COL4A3 (ENSSCUG00000009954) COL4A4 (ENSSCUG00000009953) RHBDD1 (ENSSCUG00000009950) ENSSCUG00000009949 Neognathae ANCESTRAL SPECIES ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Neognathae_b ANCESTRAL SPECIES 3 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Neognathae_c ANCESTRAL SPECIES 1 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000177637 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 ENSGT00950000182872.f.a.b Golden eagle MODERN SPECIES 20 FBXO32 (ENSACCG00020001680) KLHL38 (ENSACCG00020001670) ANXA13 (ENSACCG00020001654) FAM91A1 (ENSACCG00020001563) FER1L6 (ENSACCG00020001514) TMEM65 (ENSACCG00020001465) #7 RNF139 (ENSACCG00020001388) #8 TATDN1 (ENSACCG00020001366) #9 NDUFB9 (ENSACCG00020001330) #10 MTSS1 (ENSACCG00020001294) #11 SQLE (ENSACCG00020001250) #13 WASHC5 (ENSACCG00020001215) #14 NSMCE2 (ENSACCG00020001202) #15 TRIB1 (ENSACCG00020001190) #16 LRATD2 (ENSACCG00020001187) #18 MYC (ENSACCG00020001175) #22 CYRIB (ENSACCG00020001147) #24 ASAP1 (ENSACCG00020001089) #25 ADCY8 (ENSACCG00020001033) #27 EFR3A (ENSACCG00020000940) #29 OC90 (ENSACCG00020000830) #30 HHLA1 (ENSACCG00020000800) #31 KCNQ3 (ENSACCG00020000775) #32 DNAAF11 (ENSACCG00020000736) #34 TMEM71 (ENSACCG00020000715) #35 PHF20L1 (ENSACCG00020000677) #36 ENSACCG00020000575 SLA (ENSACCG00020000552) ENSACCG00020000530 #37 CCN4 (ENSACCG00020000483) NDRG1 (ENSACCG00020000456) Kakapo MODERN SPECIES FBXO32 (ENSSHBG00005006594) KLHL38 (ENSSHBG00005006574) ANXA13 (ENSSHBG00005006554) FAM91A1 (ENSSHBG00005006531) FER1L6 (ENSSHBG00005006377) TMEM65 (ENSSHBG00005006341) #7 RNF139 (ENSSHBG00005006323) #8 TATDN1 (ENSSHBG00005006285) #9 NDUFB9 (ENSSHBG00005006256) #10 MTSS1 (ENSSHBG00005006227) #11 SQLE (ENSSHBG00005006171) #13 WASHC5 (ENSSHBG00005006132) #14 NSMCE2 (ENSSHBG00005006093) #15 TRIB1 (ENSSHBG00005006076) #16 LRATD2 (ENSSHBG00005006064) #18 MYC (ENSSHBG00005006042) #22 CYRIB (ENSSHBG00005006029) #24 ASAP1 (ENSSHBG00005004604) #25 ADCY8 (ENSSHBG00005003773) #27 EFR3A (ENSSHBG00005002823) #29 OC90 (ENSSHBG00005002512) #30 HHLA1 (ENSSHBG00005002487) #31 KCNQ3 (ENSSHBG00005002464) #32 DNAAF11 (ENSSHBG00005002451) #34 TMEM71 (ENSSHBG00005002430) #35 ENSSHBG00005002394 #36 ENSSHBG00005002367 #36 ENSSHBG00005002352 SLA (ENSSHBG00005002333) ENSSHBG00005000662 #37 CCN4 (ENSSHBG00005001227) Passeriformes ANCESTRAL SPECIES ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Great tit MODERN SPECIES 11 FBXO32 (ENSPMJG00000011275) KLHL38 (ENSPMJG00000011276) ANXA13 (ENSPMJG00000011277) FAM91A1 (ENSPMJG00000011278) FER1L6 (ENSPMJG00000011279) TMEM65 (ENSPMJG00000011315) #7 RNF139 (ENSPMJG00000011317) #8 TATDN1 (ENSPMJG00000011318) #9 NDUFB9 (ENSPMJG00000011319) #10 MTSS1 (ENSPMJG00000011321) #11 SQLE (ENSPMJG00000011324) #13 WASHC5 (ENSPMJG00000011325) #14 NSMCE2 (ENSPMJG00000011326) #15 TRIB1 (ENSPMJG00000011327) #16 LRATD2 (ENSPMJG00000011336) #18 MYC (ENSPMJG00000011339) #22 CYRIB (ENSPMJG00000011353) #24 ASAP1 (ENSPMJG00000011357) #25 ADCY8 (ENSPMJG00000011360) #27 EFR3A (ENSPMJG00000011753) #29 OC90 (ENSPMJG00000011754) #30 HHLA1 (ENSPMJG00000011755) #31 KCNQ3 (ENSPMJG00000011756) #32 DNAAF11 (ENSPMJG00000011757) #34 TMEM71 (ENSPMJG00000011758) #35 PHF20L1 (ENSPMJG00000011759) #36 TG (ENSPMJG00000011760) #37 SLA (ENSPMJG00000011761) CCN4 (ENSPMJG00000011762) NDRG1 (ENSPMJG00000011763) ST3GAL1 (ENSPMJG00000011765) Passeriformes_d ANCESTRAL SPECIES ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Flycatcher DUPLICATION Flycatcher MODERN SPECIES 11 KLHL38 (ENSFALG00000002470) ANXA13 (ENSFALG00000002480) FAM91A1 (ENSFALG00000002488) FER1L6 (ENSFALG00000002499) TMEM65 (ENSFALG00000026314) #7 RNF139 (ENSFALG00000014388) #8 TATDN1 (ENSFALG00000002523) #9 NDUFB9 (ENSFALG00000002527) #10 MTSS1 (ENSFALG00000002532) #11 SQLE (ENSFALG00000002533) #13 WASHC5 (ENSFALG00000002536) #14 NSMCE2 (ENSFALG00000002539) #15 TRIB1 (ENSFALG00000002540) #16 LRATD2 (ENSFALG00000014396) #18 ENSFALG00000002546 #22 ENSFALG00000028548 #22 ENSFALG00000024584 CYRIB (ENSFALG00000002559) #24 ASAP1 (ENSFALG00000002571) #25 ADCY8 (ENSFALG00000002574) #27 ENSFALG00000023384 EFR3A (ENSFALG00000002579) #29 OC90 (ENSFALG00000002589) #30 KCNQ3 (ENSFALG00000002606) #32 DNAAF11 (ENSFALG00000002615) #34 TMEM71 (ENSFALG00000026174) #35 PHF20L1 (ENSFALG00000002641) #36 TG (ENSFALG00000002680) #37 SLA (ENSFALG00000023037) CCN4 (ENSFALG00000002718) NDRG1 (ENSFALG00000002723) Flycatcher MODERN SPECIES 11 FBXO32 (ENSFALG00000002463) KLHL38 (ENSFALG00000002470) ANXA13 (ENSFALG00000002480) FAM91A1 (ENSFALG00000002488) FER1L6 (ENSFALG00000002499) TMEM65 (ENSFALG00000026314) #7 RNF139 (ENSFALG00000014388) #8 TATDN1 (ENSFALG00000002523) #9 NDUFB9 (ENSFALG00000002527) #10 MTSS1 (ENSFALG00000002532) #11 SQLE (ENSFALG00000002533) #13 WASHC5 (ENSFALG00000002536) #14 NSMCE2 (ENSFALG00000002539) #15 TRIB1 (ENSFALG00000002540) #16 LRATD2 (ENSFALG00000014396) #18 ENSFALG00000002546 #22 ENSFALG00000028548 #22 ENSFALG00000024584 CYRIB (ENSFALG00000002559) #24 ASAP1 (ENSFALG00000002571) #25 ADCY8 (ENSFALG00000002574) #27 ENSFALG00000023384 EFR3A (ENSFALG00000002579) #29 OC90 (ENSFALG00000002589) #30 KCNQ3 (ENSFALG00000002606) #32 DNAAF11 (ENSFALG00000002615) #34 TMEM71 (ENSFALG00000026174) #35 PHF20L1 (ENSFALG00000002641) #36 TG (ENSFALG00000002680) #37 SLA (ENSFALG00000023037) CCN4 (ENSFALG00000002718) Passeriformes_g ANCESTRAL SPECIES 3 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Passeroidea ANCESTRAL SPECIES 2 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Zebra finch MODERN SPECIES 12 FBXO32 (ENSTGUG00000020587) KLHL38 (ENSTGUG00000012445) ANXA13 (ENSTGUG00000012446) FAM91A1 (ENSTGUG00000012458) FER1L6 (ENSTGUG00000012463) TMEM65 (ENSTGUG00000012471) #7 RNF139 (ENSTGUG00000012474) #8 TATDN1 (ENSTGUG00000012477) #9 NDUFB9 (ENSTGUG00000019009) #10 MTSS1 (ENSTGUG00000012488) #11 SQLE (ENSTGUG00000012490) #13 WASHC5 (ENSTGUG00000012498) #14 NSMCE2 (ENSTGUG00000012507) #15 TRIB1 (ENSTGUG00000028546) #16 LRATD2 (ENSTGUG00000020681) #18 MYC (ENSTGUG00000012513) #22 CYRIB (ENSTGUG00000012516) #24 ASAP1 (ENSTGUG00000012522) #25 ADCY8 (ENSTGUG00000012532) #27 EFR3A (ENSTGUG00000012536) #29 OC90 (ENSTGUG00000012542) #30 HHLA1 (ENSTGUG00000012544) #31 KCNQ3 (ENSTGUG00000012545) #32 DNAAF11 (ENSTGUG00000012554) #34 TMEM71 (ENSTGUG00000012557) #35 PHF20L1 (ENSTGUG00000012558) #36 TG (ENSTGUG00000012562) #37 SLA (ENSTGUG00000012567) CCN4 (ENSTGUG00000012573) NDRG1 (ENSTGUG00000012576) ST3GAL1 (ENSTGUG00000012594) Common canary MODERN SPECIES FBXO32 (ENSSCAG00000007348) KLHL38 (ENSSCAG00000007412) ANXA13 (ENSSCAG00000007419) FAM91A1 (ENSSCAG00000007432) FER1L6 (ENSSCAG00000007456) TMEM65 (ENSSCAG00000007479) #7 RNF139 (ENSSCAG00000007482) #8 TATDN1 (ENSSCAG00000007486) #9 NDUFB9 (ENSSCAG00000007494) #10 MTSS1 (ENSSCAG00000007525) #11 SQLE (ENSSCAG00000007538) #13 WASHC5 (ENSSCAG00000007544) #14 NSMCE2 (ENSSCAG00000007554) #15 TRIB1 (ENSSCAG00000007570) #16 LRATD2 (ENSSCAG00000007590) #18 ENSSCAG00000007609 #22 CYRIB (ENSSCAG00000007636) #24 ASAP1 (ENSSCAG00000007654) #25 ADCY8 (ENSSCAG00000007723) #27 EFR3A (ENSSCAG00000007951) #29 OC90 (ENSSCAG00000007971) #30 HHLA1 (ENSSCAG00000007989) #31 KCNQ3 (ENSSCAG00000007996) #32 DNAAF11 (ENSSCAG00000008023) #34 TMEM71 (ENSSCAG00000008025) #35 PHF20L1 (ENSSCAG00000008072) #36 TG (ENSSCAG00000008417) #37 SLA (ENSSCAG00000008460) CCN4 (ENSSCAG00000008468) NDRG1 (ENSSCAG00000008471) ST3GAL1 (ENSSCAG00000008475) Medium ground finch MODERN SPECIES 24 KLHL38 (ENSGFOG00000009149) ANXA13 (ENSGFOG00000009157) FAM91A1 (ENSGFOG00000009173) ENSGFOG00000009187 FER1L6 (ENSGFOG00000009198) TMEM65 (ENSGFOG00000009226) #7 RNF139 (ENSGFOG00000009233) #8 TATDN1 (ENSGFOG00000009241) #9 NDUFB9 (ENSGFOG00000009255) #10 MTSS1 (ENSGFOG00000009269) #11 SQLE (ENSGFOG00000009315) #13 WASHC5 (ENSGFOG00000009332) #14 NSMCE2 (ENSGFOG00000009359) #15 TRIB1 (ENSGFOG00000009369) #16 LRATD2 (ENSGFOG00000009376) #18 ENSGFOG00000009391 #22 CYRIB (ENSGFOG00000009407) #24 ASAP1 (ENSGFOG00000009438) #25 ADCY8 (ENSGFOG00000009534) #27 Galloanserae ANCESTRAL SPECIES ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Anatidae ANCESTRAL SPECIES 3 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Pink-footed goose MODERN SPECIES 37 LRATD2 (ENSABRG00000004276) #18 MYC (ENSABRG00000004255) #22 CYRIB (ENSABRG00000004214) #24 ASAP1 (ENSABRG00000004178) #25 ADCY8 (ENSABRG00000004126) #27 EFR3A (ENSABRG00000004008) #29 OC90 (ENSABRG00000003942) #30 HHLA1 (ENSABRG00000003912) #31 KCNQ3 (ENSABRG00000003498) #32 DNAAF11 (ENSABRG00000003441) #34 TMEM71 (ENSABRG00000003416) #35 PHF20L1 (ENSABRG00000001631) #36 SLA (ENSABRG00000001463) TG (ENSABRG00000001382) #37 CCN4 (ENSABRG00000001358) NDRG1 (ENSABRG00000001330) ST3GAL1 (ENSABRG00000001315) Duck MODERN SPECIES 10 ANXA13 (ENSAPLG00000005494) FAM91A1 (ENSAPLG00000005727) FER1L6 (ENSAPLG00000006119) RNF139 (ENSAPLG00000011464) #8 TATDN1 (ENSAPLG00000006883) #9 NDUFB9 (ENSAPLG00000007143) #10 ENSAPLG00000017522 MTSS1 (ENSAPLG00000015070) #11 ENSAPLG00000020771 #13 ENSAPLG00000014831 #13 WASHC5 (ENSAPLG00000014127) #14 NSMCE2 (ENSAPLG00000014092) #15 TRIB1 (ENSAPLG00000014001) #16 ENSAPLG00000028101 LRATD2 (ENSAPLG00000002038) #18 MYC (ENSAPLG00000013997) #22 ENSAPLG00000021354 CYRIB (ENSAPLG00000000687) #24 ASAP1 (ENSAPLG00000005640) #25 ENSAPLG00000024578 ADCY8 (ENSAPLG00000005493) #27 EFR3A (ENSAPLG00000004684) #29 ENSAPLG00000021459 OC90 (ENSAPLG00000004457) #30 HHLA1 (ENSAPLG00000004380) #31 KCNQ3 (ENSAPLG00000004166) #32 DNAAF11 (ENSAPLG00000004082) #34 PHF20L1 (ENSAPLG00000003781) #36 ENSAPLG00000002748 ENSAPLG00000031134 SLA (ENSAPLG00000003422) Phasianidae ANCESTRAL SPECIES 1 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Japanese quail MODERN SPECIES 11 FBXO32 (ENSCJPG00005005736) KLHL38 (ENSCJPG00005005737) ANXA13 (ENSCJPG00005005856) FAM91A1 (ENSCJPG00005005939) FER1L6 (ENSCJPG00005005959) TMEM65 (ENSCJPG00005005962) #7 RNF139 (ENSCJPG00005005964) #8 TATDN1 (ENSCJPG00005005966) #9 NDUFB9 (ENSCJPG00005005988) #10 MTSS1 (ENSCJPG00005005993) #11 SQLE (ENSCJPG00005006009) #13 WASHC5 (ENSCJPG00005006014) #14 NSMCE2 (ENSCJPG00005006017) #15 TRIB1 (ENSCJPG00005006021) #16 LRATD2 (ENSCJPG00005006030) #18 MYC (ENSCJPG00005006041) #22 ENSCJPG00005006053 CYRIB (ENSCJPG00005006069) #24 ASAP1 (ENSCJPG00005006087) #25 ADCY8 (ENSCJPG00005008192) #27 EFR3A (ENSCJPG00005008226) #29 OC90 (ENSCJPG00005008229) #30 HHLA1 (ENSCJPG00005008230) #31 KCNQ3 (ENSCJPG00005008253) #32 DNAAF11 (ENSCJPG00005008272) #34 TMEM71 (ENSCJPG00005008273) #35 PHF20L1 (ENSCJPG00005008276) #36 TG (ENSCJPG00005008340) #37 SLA (ENSCJPG00005010086) CCN4 (ENSCJPG00005010087) NDRG1 (ENSCJPG00005010088) Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159104 ENSGT00940000159300 #37 ENSGT00940000158587 ENSGT00950000182872.f.a.b ENSGT00940000154725 Chicken MODERN SPECIES 11 FBXO32 (ENSGALG00010008245) KLHL38 (ENSGALG00010008250) ANXA13 (ENSGALG00010008286) FAM91A1 (ENSGALG00010008301) FER1L6 (ENSGALG00010008945) TMEM65 (ENSGALG00010009007) #7 RNF139 (ENSGALG00010008504) #8 TATDN1 (ENSGALG00010008716) #9 NDUFB9 (ENSGALG00010008731) #10 MTSS1 (ENSGALG00010008832) #11 SQLE (ENSGALG00010008860) #13 WASHC5 (ENSGALG00010008866) #14 NSMCE2 (ENSGALG00010008897) #15 TRIB1 (ENSGALG00010008910) #16 LRATD2 (ENSGALG00010008405) #18 MYC (ENSGALG00010007986) #22 FAM49B (ENSGALG00010008233) #24 ASAP1 (ENSGALG00010008047) #25 ADCY8 (ENSGALG00010007962) #27 EFR3A (ENSGALG00010008093) #29 OC90 (ENSGALG00010008131) #30 HHLA1 (ENSGALG00010008137) #31 KCNQ3 (ENSGALG00010008154) #32 LRRC6 (ENSGALG00010008350) #34 TMEM71 (ENSGALG00010008354) #35 PHF20L1 (ENSGALG00010008387) #36 TG (ENSGALG00010008164) #37 SLA (ENSGALG00010008176) WISP1 (ENSGALG00010009736) NDRG1 (ENSGALG00010009749) ST3GAL1 (ENSGALG00010009777) Turkey MODERN SPECIES 22 ANXA13 (ENSMGAG00000012623) FAM91A1 (ENSMGAG00000012639) FER1L6 (ENSMGAG00000012654) TMEM65 (ENSMGAG00000012666) #7 ENSMGAG00000021180 ENSMGAG00000022986 #16 NSMCE2 (ENSMGAG00000012705) #15 ENSMGAG00000012691 #13 ENSMGAG00000012696 #14 MTSS1 (ENSMGAG00000012682) #11 NDUFB9 (ENSMGAG00000012681) #10 ENSMGAG00000015869 #8 ENSMGAG00000012671 #9 ENSMGAG00000020437 ENSMGAG00000015872 #18 ENSMGAG00000018595 #22 CYRIB (ENSMGAG00000012710) #24 ASAP1 (ENSMGAG00000012720) #25 ADCY8 (ENSMGAG00000012773) #27 ENSMGAG00000021146 NAPRT (ENSMGAG00000013029) EEF1D (ENSMGAG00000013035) TIGD5 (ENSMGAG00000013045) PYCR3 (ENSMGAG00000013046) GFUS (ENSMGAG00000013047) ENSMGAG00000013016 ENSMGAG00000013024 ENSMGAG00000013013 ENSMGAG00000013012 ENSMGAG00000013004 ENSMGAG00000020337 Cryptodira ANCESTRAL SPECIES 22 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000165526 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 ENSGT00950000182872.f.a.b Testudinoidea ANCESTRAL SPECIES 16 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000165526.f ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00960000189024 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Emydidae ANCESTRAL SPECIES 15 ENSGT00390000004915.a ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272 #9 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000165526.f ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00960000189024 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Three-toed box turtle MODERN SPECIES 24 NTAQ1 (ENSTMTG00000014890) FBXO32 (ENSTMTG00000014904) KLHL38 (ENSTMTG00000014921) ANXA13 (ENSTMTG00000014929) FAM91A1 (ENSTMTG00000014954) FER1L6 (ENSTMTG00000014989) RNF139 (ENSTMTG00000015084) #8 TATDN1 (ENSTMTG00000015092) #9 NDUFB9 (ENSTMTG00000015115) #10 MTSS1 (ENSTMTG00000015142) #11 SQLE (ENSTMTG00000015236) #13 WASHC5 (ENSTMTG00000015277) #14 NSMCE2 (ENSTMTG00000015297) #15 TRIB1 (ENSTMTG00000015308) #16 LRATD2 (ENSTMTG00000015339) #18 MYC (ENSTMTG00000015358) #22 CYRIB (ENSTMTG00000015369) #24 ENSTMTG00000015401 ASAP1 (ENSTMTG00000015540) #25 ADCY8 (ENSTMTG00000017786) #27 ENSTMTG00000017882 EFR3A (ENSTMTG00000017900) #29 OC90 (ENSTMTG00000017984) #30 HHLA1 (ENSTMTG00000018016) #31 KCNQ3 (ENSTMTG00000018042) #32 ENSTMTG00000018065 DNAAF11 (ENSTMTG00000018079) #34 PHF20L1 (ENSTMTG00000018149) #36 TG (ENSTMTG00000018361) #37 SLA (ENSTMTG00000018589) CCN4 (ENSTMTG00000018615) painted turtle MODERN SPECIES 2424 FBXO32 (ENSCPBG00000020653) KLHL38 (ENSCPBG00000020651) ANXA13 (ENSCPBG00000020644) FAM91A1 (ENSCPBG00000020634) FER1L6 (ENSCPBG00000020627) TMEM65 (ENSCPBG00000020624) #7 RNF139 (ENSCPBG00000020623) #8 TATDN1 (ENSCPBG00000020621) #9 NDUFB9 (ENSCPBG00000020618) #10 MTSS1 (ENSCPBG00000020613) #11 SQLE (ENSCPBG00000020605) #13 WASHC5 (ENSCPBG00000020601) #14 NSMCE2 (ENSCPBG00000020596) #15 TRIB1 (ENSCPBG00000020593) #16 LRATD2 (ENSCPBG00000020586) #18 MYC (ENSCPBG00000020576) #22 ENSCPBG00000020575 CYRIB (ENSCPBG00000020574) #24 ENSCPBG00000020570 ENSCPBG00000020567 ASAP1 (ENSCPBG00000020558) #25 ADCY8 (ENSCPBG00000020454) #27 ENSCPBG00000020440 EFR3A (ENSCPBG00000020427) #29 OC90 (ENSCPBG00000020419) #30 HHLA1 (ENSCPBG00000020408) #31 KCNQ3 (ENSCPBG00000020379) #32 TMEM71 (ENSCPBG00000020343) #35 PHF20L1 (ENSCPBG00000019765) #36 ENSCPBG00000019717 SLA (ENSCPBG00000019705) Testudinidae ANCESTRAL SPECIES 27 ENSGT00940000157647 ENSGT00940000159797 ENSGT00390000009543 ENSGT00940000159069 ENSGT00390000017802 #7 ENSGT00940000158932 #8 ENSGT00940000156272.b #9 ENSGT00960000187692 ENSGT00390000005809 #10 ENSGT00950000183156.a.b.b.b.b.a #11 ENSGT00390000011759 #13 ENSGT00390000011137 #14 ENSGT00390000013961 #15 ENSGT00950000182986.a.b.b #16 ENSGT00940000159198 #18 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 ENSGT00940000165526.f ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00960000189024 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00940000156215 #36 ENSGT00940000159300 #37 ENSGT00940000159104 ENSGT00940000158587 Abingdon island giant tortoise MODERN SPECIES 939 SQLE (ENSCABG00000001328) #13 WASHC5 (ENSCABG00000001335) #14 NSMCE2 (ENSCABG00000001343) #15 ENSCABG00000001345 #16 ENSCABG00000001346 #16 LRATD2 (ENSCABG00000001351) #18 MYC (ENSCABG00000001363) #22 ENSCABG00000001368 ENSCABG00000001377 Goode s thornscrub tortoise MODERN SPECIES 11 NTAQ1 (ENSGEVG00005016028) FBXO32 (ENSGEVG00005016057) KLHL38 (ENSGEVG00005016080) ANXA13 (ENSGEVG00005016148) FAM91A1 (ENSGEVG00005016305) FER1L6 (ENSGEVG00005016375) ENSGEVG00005016587 #8 ENSGEVG00005016618 #9 ENSGEVG00005016705 #9 NDUFB9 (ENSGEVG00005016727) #10 MTSS1 (ENSGEVG00005016809) #11 SQLE (ENSGEVG00005016899) #13 NSMCE2 (ENSGEVG00005009082) #15 TRIB1 (ENSGEVG00005009105) #16 LRATD2 (ENSGEVG00005009130) #18 MYC (ENSGEVG00005009268) #22 CYRIB (ENSGEVG00005009394) #24 ENSGEVG00005009484 ASAP1 (ENSGEVG00005010485) #25 ADCY8 (ENSGEVG00005014009) #27 ENSGEVG00005014293 EFR3A (ENSGEVG00005014376) #29 OC90 (ENSGEVG00005014504) #30 HHLA1 (ENSGEVG00005014594) #31 KCNQ3 (ENSGEVG00005014822) #32 DNAAF11 (ENSGEVG00005015374) #34 TMEM71 (ENSGEVG00005015428) #35 PHF20L1 (ENSGEVG00005015514) #36 TG (ENSGEVG00005015728) #37 SLA (ENSGEVG00005016128) CCN4 (ENSGEVG00005016219) Chinese turtle MODERN SPECIES 1134 TMEM65 (ENSPSIG00000009013) #7 RNF139 (ENSPSIG00000009001) #8 TATDN1 (ENSPSIG00000008996) #9 NDUFB9 (ENSPSIG00000008938) #10 MTSS1 (ENSPSIG00000008731) #11 SQLE (ENSPSIG00000008578) #13 WASHC5 (ENSPSIG00000008477) #14 NSMCE2 (ENSPSIG00000008439) #15 TRIB1 (ENSPSIG00000008361) #16 ENSPSIG00000000817 LRATD2 (ENSPSIG00000008347) #18 MYC (ENSPSIG00000008301) #22 CYRIB (ENSPSIG00000008087) #24 ENSPSIG00000008080 ASAP1 (ENSPSIG00000007728) #25 ADCY8 (ENSPSIG00000007628) #27 ENSPSIG00000007621 ENSPSIG00000007602 EFR3A (ENSPSIG00000006464) #29 OC90 (ENSPSIG00000006449) #30 HHLA1 (ENSPSIG00000006442) #31 KCNQ3 (ENSPSIG00000005786) #32 DNAAF11 (ENSPSIG00000005714) #34 TMEM71 (ENSPSIG00000005676) #35 PHF20L1 (ENSPSIG00000005370) #36 SLA (ENSPSIG00000005284) TG (ENSPSIG00000004840) #37 Anura ANCESTRAL SPECIES 575 ENSGT00940000155285.b #22 ENSGT00390000015159.b #24 Leishan spiny toad MODERN SPECIES 8 TATDN1 (ENSLLEG00000013747) #9 NDUFB9 (ENSLLEG00000013944) #10 MTSS1 (ENSLLEG00000013998) #11 ENSLLEG00000014142 ENSLLEG00000014608 SQLE (ENSLLEG00000014639) #13 WASHC5 (ENSLLEG00000014791) #14 NSMCE2 (ENSLLEG00000016144) #15 TRIB1 (ENSLLEG00000016209) #16 ENSLLEG00000016251 LRATD2 (ENSLLEG00000016277) #18 ENSLLEG00000016299 ENSLLEG00000016321 ENSLLEG00000005283 ENSLLEG00000005295 MYC (ENSLLEG00000005334) #22 ENSLLEG00000005446 ENSLLEG00000005461 ENSLLEG00000005478 ENSLLEG00000005496 ENSLLEG00000005519 CYRIB (ENSLLEG00000005585) #24 ENSLLEG00000006060 ENSLLEG00000006070 ENSLLEG00000006084 ENSLLEG00000006110 ENSLLEG00000006158 ASAP1 (ENSLLEG00000006455) #25 ENSLLEG00000009287 ADCY8 (ENSLLEG00000009358) #27 ENSLLEG00000009922 Frog MODERN SPECIES 6 anxa13 (ENSXETG00000023236) fam91a1 (ENSXETG00000023243) fer1l6 (ENSXETG00000023247) tmem65 (ENSXETG00000049163) #7 cat2 (ENSXETG00000017451) mtss1.1 (ENSXETG00000017462) #11 ENSXETG00000049126 ndufb9 (ENSXETG00000030956) #10 tatdn1 (ENSXETG00000017477) #9 rnf139 (ENSXETG00000017487) #8 washc5 (ENSXETG00000017490) #14 nsmce2 (ENSXETG00000037257) #15 mcm7 (ENSXETG00000017499) #16 lratd2 (ENSXETG00000046349) #18 ENSXETG00000046371 myc (ENSXETG00000025372) #22 ENSXETG00000043453 ENSXETG00000041686 ENSXETG00000046807 cyrib (ENSXETG00000017755) #24 42Sp50 (ENSXETG00000017744) asap1 (ENSXETG00000017737) #25 ENSXETG00000041432 adcy8 (ENSXETG00000036330) #27 ENSXETG00000037811 efr3a (ENSXETG00000023031) #29 oc90 (ENSXETG00000031473) #30 kcnq3 (ENSXETG00000023036) #32 dnaaf11 (ENSXETG00000023039) #34 phf20l1 (ENSXETG00000023046) #36 sqle (ENSXETG00000023050) #13 Coelacanth MODERN SPECIES 355 ENSLACG00000017765 MYC (ENSLACG00000017161) #22 ENSLACG00000014311 ENSLACG00000010770 CYRIB (ENSLACG00000008235) #24 eef1a1l3 (ENSLACG00000003948) ASAP1 (ENSLACG00000000619) #25 Actinopterygii DUPLICATION Actinopterygii ANCESTRAL SPECIES ENSGT00940000155285.b.i #22 Neopterygii ANCESTRAL SPECIES ENSGT00940000155285.b.i #22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000155285.b.i #22 Clupeocephala ANCESTRAL SPECIES 248 ENSGT00940000157031.l ENSGT00390000006522.a.b ENSGT00930000151022.b ENSGT01100000263502.B.a.a.c ENSGT00910000144592 ENSGT00940000155562.l.a ENSGT00990000210078 ENSGT01030000234667.a.a.b.f ENSGT00930000151367.d.a ENSGT00940000159820 ENSGT00940000157026 ENSGT00910000148338 ENSGT01030000234607.A.a.a.b ENSGT00940000165754 ENSGT00940000158259.a ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d #25 ENSGT00390000014069.a ENSGT00390000009194 Euteleosteomorpha ANCESTRAL SPECIES 188 ENSGT00930000151022.b ENSGT01100000263502.B.a.a.c ENSGT00910000144592 ENSGT00940000155562.l.a ENSGT00990000210078 ENSGT01030000234667.a.a.b.f ENSGT00930000151367.d.a ENSGT00940000159820 ENSGT00940000157026 ENSGT00910000148338 ENSGT00940000155594.d ENSGT00940000159566 ENSGT01030000234607.A.a.a.b ENSGT00940000165754 ENSGT00940000158259.a ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d #25 ENSGT00390000014069.a ENSGT00390000009194 Acanthomorphata ANCESTRAL SPECIES 17 ENSGT00940000154103.a ENSGT00940000154936 ENSGT00940000176911 ENSGT00940000159385 ENSGT00390000017765.b ENSGT00940000158777 ENSGT00940000162962 ENSGT00390000014100.k.b ENSGT00950000183215.c.a.b ENSGT00940000157658 ENSGT00940000159294 ENSGT00940000154004.a.e.a ENSGT00390000003849 ENSGT00940000157709.j ENSGT00390000002854 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d #25 ENSGT00390000014069.a ENSGT00390000009194 ENSGT00940000158259.a ENSGT00940000165754 ENSGT01030000234607.A.a.a.b ENSGT00940000159566 ENSGT00940000155594.d ENSGT00910000148338 ENSGT00940000157026 ENSGT00940000159820 ENSGT01030000234667.a.a.b.f ENSGT00910000144592 ENSGT01100000263502.B.a.a.c Euacanthomorphacea ANCESTRAL SPECIES 230 ENSGT00390000002854 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 Percomorphaceae ANCESTRAL SPECIES 68 ENSGT00940000156056.B.c.a ENSGT00940000156387 ENSGT00940000166734 ENSGT00500000044904.a.a.b ENSGT00390000014380.h.b.b.i.a ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154505.B ENSGT01010000223507 ENSGT01010000222847 ENSGT00940000154474.C ENSGT00940000161528 ENSGT00390000002854 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183307 ENSGT00940000159409 Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00940000156056.B.c.a ENSGT00940000156387 ENSGT00500000044904.a.a.a ENSGT00940000166734 ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154505.B ENSGT01010000222847 ENSGT00940000154474.C ENSGT00940000161528 ENSGT00390000002854 ENSGT00670000098480 ENSGT00940000168894 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00980000198724 ENSGT00940000164867.a ENSGT00940000157702 ENSGT00940000166185 ENSGT00940000155924.b ENSGT00940000160470 ENSGT00950000183179.a ENSGT00940000158333 ENSGT00940000171785 ENSGT00940000177551 ENSGT01030000234557.A.e.b.f ENSGT01030000234557.A.e.a.b.b.a.b ENSGT01030000234557.A.e.a.b.a.a.b Ovalentaria ANCESTRAL SPECIES 5 ENSGT00500000044904.a.a.b.a.a ENSGT00500000044904.a.a.b.a.b ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154505.B ENSGT01010000222847 ENSGT00940000154474.C ENSGT00940000161528 ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.b.a.b ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.a ENSGT00390000002854 ENSGT00670000098480 ENSGT00940000168894 ENSGT00940000155285.b.i #22 ENSGT01100000263507.E.a.b.a.a.b.b ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT00940000159409 ENSGT00940000157702 ENSGT00940000166185 ENSGT00940000158069 ENSGT00940000155924.b ENSGT00940000160470 ENSGT00950000183179.a ENSGT00940000158333 ENSGT00940000171785 ENSGT00940000168359 ENSGT00940000153141.B.b Atherinomorphae ANCESTRAL SPECIES 63 ENSGT00940000165563.a ENSGT00940000162100 ENSGT00390000013727.d.b ENSGT00940000155931.b ENSGT00940000153141.B.b ENSGT00940000168359 ENSGT00940000171785 ENSGT00940000158333 ENSGT00940000157702 ENSGT00940000166185 ENSGT00910000148528 ENSGT00940000158069 ENSGT00940000155924.b ENSGT00940000160470 ENSGT00950000183179.a ENSGT00940000155285.b.i #22 ENSGT01100000263507.E.a.b.a.a.b.b ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT00940000159409 Cyprinodontiformes ANCESTRAL SPECIES 5 ENSGT00500000044904.a.a.a ENSGT00390000014380.h.b.b.i.a ENSGT00500000044904.a.a.b.a.b ENSGT00940000166734.z ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154474.C ENSGT00940000161528 ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.a ENSGT00390000002854 ENSGT01090000261032 ENSGT00940000168894 ENSGT00670000098480 ENSGT00940000155285.b.i #22 ENSGT01100000263507.E.a.b.a.a.b.b.c.b ENSGT01100000263507.E.a.b.a.a.b.b.c.a.b ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT00940000159409 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000155924.b ENSGT00910000148528 ENSGT00940000166185 ENSGT00940000157702 ENSGT00940000158333 ENSGT00940000171785 ENSGT00940000168359 Aplocheiloidei ANCESTRAL SPECIES 78 ENSGT01100000263491.a.b.a.a.b.b.a ENSGT00390000011144 #35 ENSGT00390000006307 ENSGT00950000182910.a.b.a ENSGT00940000177172.a.b ENSGT00940000156387 ENSGT00940000166734.y ENSGT00940000165457.a.b ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154474.C ENSGT00940000161528 ENSGT00390000002854 ENSGT01090000261032 ENSGT00940000155285.b.i #22 ENSGT01100000263507.E.a.b.a.a.b.b.c.a.b ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00940000159409 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000155924.b ENSGT00940000166185 Mangrove rivulus MODERN SPECIES 830 ENSKMAG00000000345 ENSKMAG00000000368 ENSKMAG00000000371 ENSKMAG00000000377 #22 ENSKMAG00000000387 fam49ba (ENSKMAG00000000417) #24 Turquoise killifish MODERN SPECIES 1618 ENSNFUG00015020264 slc39a6 (ENSNFUG00015020258) ENSNFUG00015020257 cldn15la (ENSNFUG00015020251) SAGA (ENSNFUG00015019730) ENSNFUG00015019675 PROC (ENSNFUG00015019661) DUSP28 (ENSNFUG00015019652) VCPIP1 (ENSNFUG00015019644) ENSNFUG00015019636 ENSNFUG00015019627 ENSNFUG00015019625 ENSNFUG00015019618 ENSNFUG00015019615 ENSNFUG00015019612 ENSNFUG00015019609 #22 ENSNFUG00015019602 ENSNFUG00015019596 FAM49BA (ENSNFUG00015019501) #24 PHB2 (ENSNFUG00015019484) ENSNFUG00015019476 dlg1b (ENSNFUG00015012232) NMNAT2 (ENSNFUG00015011833) ENSNFUG00015011812 dhx9 (ENSNFUG00015011745) lamc1 (ENSNFUG00015010937) ENSNFUG00015010888 ENSNFUG00015010877 ENSNFUG00015010872 ENSNFUG00015010863 ENSNFUG00015010855 Cyprinodontoidei ANCESTRAL SPECIES 2 ENSGT00500000044904.a.a.a ENSGT00390000014380.h.b.b.i.a.d.a ENSGT00940000166734.z ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00970000193381.a.a.a.a.b.b.a.b ENSGT00940000155435.B.b ENSGT00940000154474.C ENSGT00940000161528 ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.a ENSGT00390000002854 ENSGT01090000261032 ENSGT00940000168894 ENSGT00670000098480 ENSGT00940000155285.b.i #22 ENSGT01100000263507.E.a.b.a.a.b.b.c.b ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000155924.b ENSGT00910000148528 ENSGT00940000166185 ENSGT00940000157702 ENSGT00940000158333 ENSGT00940000171785 ENSGT01030000234557.A.e.a.b.b.b.f ENSGT01000000214796 ENSGT00940000177057 Poeciliinae ANCESTRAL SPECIES 58 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.i.a.a.d.a.b ENSGT00940000164867.a ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.i.a.a.d.a.a.b.a.a.a ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000155924.b ENSGT00940000166185 ENSGT00940000157702 ENSGT00940000158333 ENSGT00940000171785 ENSGT01030000234557.A.e.a.b.b.b.e.a.b.a.b ENSGT01030000234557.A.e.b.f Poecilia ANCESTRAL SPECIES 100 ENSGT00940000162287.G.j ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.i.a.a.d.a.b ENSGT00940000164867.a ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.i.a.a.d.a.a.b.a.a.a ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000155924.b ENSGT00940000166185 ENSGT00940000157702 ENSGT00940000158333 ENSGT00940000177332 ENSGT01030000234557.A.e.a.b.b.b.e.a.b.a.b ENSGT01030000234557.A.e.b.f NAME_6 ANCESTRAL SPECIES 301 ENSGT00940000162287.G.j ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.i.a.a.d.a.b ENSGT00940000164867.a ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.i.a.a.d.a.a.b.a.a.a ENSGT00950000183179.a ENSGT00940000160470 ENSGT00940000155924.b ENSGT00940000166185 ENSGT00940000157702 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.i.a.a.d.a.a.b.a.b.a.b ENSGT00940000158333 Amazon molly MODERN SPECIES 716 ENSPFOG00000024556 ENSPFOG00000022811 ENSPFOG00000018966 #22 fam49ba (ENSPFOG00000018973) #24 PHB2 (ENSPFOG00000018982) ENSPFOG00000018994 ENSPFOG00000020561 ENSPFOG00000019022 ENSPFOG00000024355 nmnat2 (ENSPFOG00000019079) ENSPFOG00000019106 ENSPFOG00000019152 lamc1 (ENSPFOG00000019174) RASAL2 (ENSPFOG00000019205) ENSPFOG00000019215 smg7 (ENSPFOG00000019219) Sailfin molly MODERN SPECIES 535 ENSPLAG00000018887 ENSPLAG00000018883 #22 fam49ba (ENSPLAG00000018878) #24 PHB2 (ENSPLAG00000018863) ptmab (ENSPLAG00000018838) ENSPLAG00000018815 ENSPLAG00000000427 ENSPLAG00000018800 Guppy MODERN SPECIES 34 ENSPREG00000004445 ENSPREG00000004533 ENSPREG00000004541 #22 fam49ba (ENSPREG00000004556) #24 ENSPREG00000004575 ptmab (ENSPREG00000004591) ENSPREG00000004619 ENSPREG00000004650 Platyfish MODERN SPECIES 20 DUSP28 (ENSXMAG00000013111) ENSXMAG00000028075 VCPIP1 (ENSXMAG00000020911) ENSXMAG00000021809 ENSXMAG00000026079 ENSXMAG00000026767 ENSXMAG00000023778 ENSXMAG00000021436 ENSXMAG00000026932 ENSXMAG00000022297 ENSXMAG00000025046 ENSXMAG00000029039 ENSXMAG00000026601 ENSXMAG00000029552 ENSXMAG00000027640 ENSXMAG00000003897 #22 fam49ba (ENSXMAG00000003888) #24 PHB2 (ENSXMAG00000003875) ptmab (ENSXMAG00000011234) ENSXMAG00000026847 ENSXMAG00000023535 ENSXMAG00000011236 ENSXMAG00000029876 ENSXMAG00000022688 ENSXMAG00000023071 ENSXMAG00000024031 nmnat2 (ENSXMAG00000009447) ENSXMAG00000011284 ENSXMAG00000021998 dhx9 (ENSXMAG00000011305) lamc1 (ENSXMAG00000003303) NAME_4 ANCESTRAL SPECIES 519 ENSGT00940000155285.b.i #22 ENSGT01100000263507.E.a.b.a.a.b.b.c.b ENSGT00390000015159.b.b #24 Mummichog MODERN SPECIES 1382 ENSFHEG00000000546 #22 Sheepshead minnow MODERN SPECIES 1310 ENSCVAG00000020424 #22 ENSCVAG00000020414 fam49ba (ENSCVAG00000000526) #24 ENSCVAG00000020386 PHB2 (ENSCVAG00000020372) Oryzias ANCESTRAL SPECIES 12 ENSGT00950000183179.a.m ENSGT00940000160470 ENSGT00940000155924.b ENSGT00940000166185 ENSGT00940000157702 ENSGT00940000158333 ENSGT00940000175566.d ENSGT00390000014100.k.a ENSGT00940000153141.B.b ENSGT00940000155931.b ENSGT00390000013727.d.b ENSGT00940000165563.a ENSGT00390000018525.b ENSGT00730000111130 ENSGT01100000263489.a.b.a.b.a.a.a.a.b.b.b.b ENSGT00940000155285.b.i #22 ENSGT00950000183052.b.c.b.b.b.a.b.a.g.a ENSGT01000000219530 ENSGT00950000183052.b.c.b.b.b.a.b.a.h ENSGT00940000155594.d ENSGT00940000159566 ENSGT01030000234607.A.a.a.b ENSGT00940000165754 ENSGT00390000014069.a ENSGT00940000162179.e.b.a.b ENSGT00390000009194 ENSGT00940000158259.a ENSGT00940000159294 ENSGT00940000154004.a.e.a ENSGT00390000003849 Oryzias_a ANCESTRAL SPECIES 98 ENSGT01030000234557.A.e.b.f.s.b ENSGT01030000234557.A.e.a.b.b.b.g.a.b.a.a.a.b ENSGT00390000014100.k.a ENSGT00940000153141.B.b ENSGT00940000155931.b ENSGT00940000160300 ENSGT00390000013727.d.b ENSGT00940000165563.a ENSGT00390000018525.b ENSGT00730000111130 ENSGT01100000263489.a.b.a.b.a.a.a.a.b.b.b.a.b.a.b ENSGT00940000155285.b.i #22 ENSGT00950000183052.b.c.b.b.b.a.b.a.g.a ENSGT01000000219530 ENSGT00950000183052.b.c.b.b.b.a.b.a.h ENSGT00940000155594.d ENSGT00940000159566 ENSGT01030000234607.A.a.a.b ENSGT00940000165754 ENSGT00390000014069.a ENSGT00390000009194 ENSGT00940000158259.a ENSGT00940000159294 ENSGT00940000154004.a.e.a ENSGT00390000003849 Japanese Medaka HdrR MODERN SPECIES 8 sft2d3 (ENSORLG00000007155) WDR33 (ENSORLG00000007142) ENSORLG00000029713 ENSORLG00000023519 ENSORLG00000023523 ENSORLG00000025244 ENSORLG00000026568 ENSORLG00000007032 ENSORLG00000022490 ENSORLG00000025380 ENSORLG00000025362 ENSORLG00000029807 ENSORLG00000007097 ENSORLG00000030655 ENSORLG00000024183 c-myc17 (ENSORLG00000029789) #22 ENSORLG00000007009 ENSORLG00000006966 ENSORLG00000028655 afg3l2 (ENSORLG00000006950) fastk (ENSORLG00000023667) ubtfl (ENSORLG00000028093) tmub1 (ENSORLG00000006920) ttc19 (ENSORLG00000006913) slc4a2a (ENSORLG00000006900) DNAJC5B (ENSORLG00000027951) TRIM55 (ENSORLG00000006855) ENSORLG00000006816 adhfe1 (ENSORLG00000006809) ENSORLG00000022229 ENSORLG00000022962 Chinese medaka MODERN SPECIES 965 ENSOSIG00000016923 ENSOSIG00000016920 ENSOSIG00000016919 ENSOSIG00000016916 #22 ENSOSIG00000016915 ENSOSIG00000016769 ENSOSIG00000016759 ENSOSIG00000016676 puf60b (ENSOSIG00000016662) afg3l2 (ENSOSIG00000016033) fastk (ENSOSIG00000016018) ubtfl (ENSOSIG00000015990) tmub1 (ENSOSIG00000015984) ENSOSIG00000015981 ttc19 (ENSOSIG00000015979) slc4a2a (ENSOSIG00000009884) trim55a (ENSOSIG00000009581) Oryzias_b ANCESTRAL SPECIES 28 ENSGT01030000234557.A.e.a.b.b.b.h.a.b ENSGT01100000263768 ENSGT00390000014100.k.a ENSGT00940000153141.B.b ENSGT00940000155931.b ENSGT00390000013727.d.b ENSGT00940000165563.a ENSGT00390000018525.b ENSGT00730000111130 ENSGT00670000098480.o ENSGT00670000098480.p.b.a ENSGT01100000263533.b.a.a.b.m ENSGT01100000263489.a.b.a.b.a.a.a.a.b.b.b.b ENSGT01100000263489.a.b.a.b.a.a.a.a.b.b.b.a.a.b ENSGT00940000155285.b.i #22 ENSGT00950000183052.b.c.b.b.b.a.b.a.g.a ENSGT01000000219530 ENSGT00950000183052.b.c.b.b.b.a.b.a.h ENSGT00940000155594.d ENSGT00940000159566 ENSGT01030000234607.A.a.a.b ENSGT00940000165754 ENSGT00390000014069.a ENSGT00940000162179.e.b.a.b ENSGT00390000009194 ENSGT00940000158259.a ENSGT00940000159294 ENSGT00940000154004.a.e.a ENSGT00390000003849 ENSGT00600000084860.A.b Javanese ricefish MODERN SPECIES 8 ENSOJAG00000010215 ENSOJAG00000010193 ENSOJAG00000009139 ENSOJAG00000009131 ENSOJAG00000009112 sft2d3 (ENSOJAG00000009105) WDR33 (ENSOJAG00000009065) ENSOJAG00000008977 ENSOJAG00000008926 ENSOJAG00000008911 ENSOJAG00000008809 ENSOJAG00000008785 ENSOJAG00000008768 ENSOJAG00000008732 ENSOJAG00000008727 ENSOJAG00000008676 #22 ENSOJAG00000008619 ENSOJAG00000008609 ENSOJAG00000008570 ENSOJAG00000008556 ENSOJAG00000008535 ENSOJAG00000008522 ENSOJAG00000008512 ENSOJAG00000020890 ENSOJAG00000020885 ENSOJAG00000020875 ENSOJAG00000020768 ENSOJAG00000020692 afg3l2 (ENSOJAG00000020413) fastk (ENSOJAG00000020368) ubtfl (ENSOJAG00000019772) Indian medaka MODERN SPECIES 7 ENSOMEG00000002171 ENSOMEG00000002163 WDR33 (ENSOMEG00000002158) ENSOMEG00000002139 ENSOMEG00000002109 ENSOMEG00000002101 ENSOMEG00000002095 ENSOMEG00000000030 ENSOMEG00000002089 ENSOMEG00000023827 ENSOMEG00000023820 ENSOMEG00000023778 ENSOMEG00000023777 ENSOMEG00000023774 ENSOMEG00000023744 ENSOMEG00000023696 #22 ENSOMEG00000023652 ENSOMEG00000023150 ENSOMEG00000023102 ENSOMEG00000022975 ENSOMEG00000022971 ENSOMEG00000022915 ENSOMEG00000022681 ENSOMEG00000022620 ENSOMEG00000022185 afg3l2 (ENSOMEG00000022132) fastk (ENSOMEG00000022058) ubtfl (ENSOMEG00000021993) tmub1 (ENSOMEG00000021900) ENSOMEG00000021889 ttc19 (ENSOMEG00000021879) Ovalentaria_B ANCESTRAL SPECIES 35 ENSGT00940000156387 ENSGT00500000044904.a.a.a ENSGT00940000166734 ENSGT00500000044904.a.a.b.a.b ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT01010000223507 ENSGT01010000222847 ENSGT00940000154474.C ENSGT00940000161528 ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.b.a.b ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.a ENSGT00390000002854 ENSGT00940000155285.b.i #22 ENSGT01100000263507.E.a.b.a.a.b.b ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT00500000044904.a.a.b.a.a ENSGT00390000014380.h.b.b.i.a ENSGT00940000164867.a ENSGT01100000263507.E.a.b.a.b.a ENSGT00940000159409 ENSGT00940000157702 ENSGT00940000166185 ENSGT00940000158069 ENSGT00940000155924.b ENSGT00940000160470 ENSGT00950000183179.a Cichlidae ANCESTRAL SPECIES 2 ENSGT00940000156387 ENSGT00500000044904.a.a.a ENSGT00940000166734 ENSGT00500000044904.a.a.b.a.b ENSGT00510000048354 ENSGT00940000165457.a.b ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT01010000222847 ENSGT00940000155435.B.a ENSGT00940000154474.C ENSGT00940000161528 ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.a ENSGT00390000002854 ENSGT00940000155285.b.i #22 ENSGT01100000263507.E.a.b.a.a.b.b ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT00500000044904.a.a.b.a.a.a ENSGT00390000014380.h.b.b.i.a ENSGT00940000164867.a ENSGT00950000183052.b.c.b.b.b.a.b.a ENSGT00940000157702 ENSGT01100000263533.b.b.b.a.a.a.a.c.b ENSGT00940000166185 ENSGT00940000158069 ENSGT00940000155924.b ENSGT00940000160470 ENSGT00950000183179.a Pseudocrenilabrinae ANCESTRAL SPECIES 7 ENSGT00940000166734.`b.a ENSGT00500000044904.a.a.a ENSGT00940000166734.`b.b ENSGT00500000044904.a.a.b.a.b ENSGT00510000048354 ENSGT00940000165457.a.b ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT01010000222847 ENSGT00940000155435.B.a ENSGT00940000154474.C ENSGT00940000161528 ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.a ENSGT00390000002854 ENSGT00940000155285.b.i #22 ENSGT01100000263507.E.a.b.a.a.b.b ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT00390000014380.h.b.b.i.a.g ENSGT00500000044904.a.a.b.a.a.a.b ENSGT00390000014380.h.b.b.i.a.f.b ENSGT00940000164867.a ENSGT00950000183052.b.c.b.b.b.a.b.a ENSGT00940000157702 ENSGT01100000263533.b.b.b.a.a.a.a.c.b ENSGT00940000166185 ENSGT00940000158069 ENSGT00940000155924.b ENSGT00940000160470 Pseudocrenilabrinae_A ANCESTRAL SPECIES 4 ENSGT00940000156056.B.c.a ENSGT00940000156387 ENSGT00500000044904.a.a.a ENSGT00940000166734.`b.a.c.b ENSGT00500000044904.a.a.b.a.b ENSGT00940000165457.a.b ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT01010000222847.a ENSGT00940000154474.C ENSGT00940000161528 ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.a ENSGT00390000002854 ENSGT00940000155060.C.b.kb.e ENSGT00940000155285.b.i #22 ENSGT01100000263507.E.a.b.a.a.b.b ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT00390000014380.h.b.b.i.a.g ENSGT00500000044904.a.a.b.a.a.a.b ENSGT00390000014380.h.b.b.i.a.f.b ENSGT00940000164867.a ENSGT00950000183052.b.c.b.b.b.a.b.a ENSGT00940000157702 ENSGT01100000263533.b.b.b.a.a.a.a.c.b ENSGT00940000166185 ENSGT00940000158069 ENSGT00940000155924.b ENSGT00940000160470 Haplochromini ANCESTRAL SPECIES 2 ENSGT00950000182910.a.b.a ENSGT00940000156056.B.c.a ENSGT00940000156387 ENSGT00500000044904.a.a.a ENSGT00940000166734.`b.a.c.b.a ENSGT00500000044904.a.a.b.a.b ENSGT00940000165457.a.b ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154474.C ENSGT00940000161528 ENSGT01100000263507.E.a.a.a.b.a.b ENSGT00390000002854 ENSGT00940000155060.C.b.kb.e ENSGT00940000155285.b.i #22 ENSGT01100000263507.E.a.b.a.a.b.b ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT00390000014380.h.b.b.i.a.g ENSGT00500000044904.a.a.b.a.a.a.b ENSGT00390000014380.h.b.b.i.a.f.b ENSGT00940000164867.a ENSGT00950000183052.b.c.b.b.b.a.b.a ENSGT00940000157702 ENSGT01100000263533.b.b.b.a.a.a.a.c.b ENSGT00940000166185 ENSGT00940000158069 ENSGT00940000155924.b ENSGT00940000160470 Burton s mouthbrooder MODERN SPECIES 1005 ENSHBUG00000012994 #22 ENSHBUG00000012984 fam49ba (ENSHBUG00000012956) #24 PHB2 (ENSHBUG00000012917) ENSHBUG00000012902 ptmaa (ENSHBUG00000012880) ENSHBUG00000000369 Haplochromini_A ANCESTRAL SPECIES 3 ENSGT00940000156056.B.c.a ENSGT00940000156387 ENSGT00500000044904.a.a.a ENSGT00940000166734.`b.a.c.b.a ENSGT00500000044904.a.a.b.a.b ENSGT00940000165457.a.b ENSGT00940000176074 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154474.C ENSGT00940000161528 ENSGT00940000153582.a.m.a.b.f.a.b.a.a ENSGT00390000002854 ENSGT00940000155060.C.b.kb.e ENSGT00940000155285.b.i #22 ENSGT01100000263507.E.a.b.a.a.b.b ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT00390000014380.h.b.b.i.a.g ENSGT00500000044904.a.a.b.a.a.a.b ENSGT00390000014380.h.b.b.i.a.f.b ENSGT00940000159409 ENSGT00940000164867.a ENSGT00950000183052.b.c.b.b.b.a.b.a ENSGT00940000157702 ENSGT01100000263533.b.b.b.a.a.a.a.c.b ENSGT00940000166185 ENSGT00940000158069 ENSGT00940000155924.b P. nyererei MODERN SPECIES 764 ENSPNYG00000020230 #22 ENSPNYG00000020245 fam49ba (ENSPNYG00000020279) #24 PHB2 (ENSPNYG00000020306) ptmab (ENSPNYG00000000863) Haplochromini_B ANCESTRAL SPECIES 54 ENSGT00500000044904.a.a.a.d ENSGT00940000166734.`b.a.d ENSGT00940000166734.`b.a.c.b.b ENSGT00500000044904.a.a.a.c ENSGT00940000166734.`b.a.c.b.a ENSGT00500000044904.a.a.b.a.b ENSGT00940000165457.a.b ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154474.C ENSGT00940000161528 ENSGT00940000153582.a.m.a.b.f.a.b.a.a ENSGT00390000002854 ENSGT00940000155060.C.b.kb.e ENSGT00940000155285.b.i #22 ENSGT01100000263507.E.a.b.a.a.b.b ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT01070000254364 ENSGT00950000183307 ENSGT00390000014380.h.b.b.i.a.g ENSGT00500000044904.a.a.b.a.a.a.b ENSGT00500000044904.a.a.b.a.a.a.a.b ENSGT00390000014380.h.b.b.i.a.f.a.a.a ENSGT00500000044904.a.a.b.a.a.a.a.a ENSGT00390000014380.h.b.b.i.a.f.a.a.b ENSGT00500000044904.a.a.b.a.a.b ENSGT00390000014380.h.b.b.i.a.f.a.b ENSGT00940000159409 ENSGT00940000164867.a Zebra mbuna MODERN SPECIES 95 ENSMZEG00005001095 #22 ENSMZEG00005001107 fam49ba (ENSMZEG00005001299) #24 PHB2 (ENSMZEG00005001316) ENSMZEG00005001342 ptmab (ENSMZEG00005001346) ENSMZEG00005001363 ENSMZEG00005001373 ENSMZEG00005001387 ENSMZEG00005001395 ENSMZEG00005001406 ENSMZEG00005001417 ENSMZEG00005001435 Eastern happy MODERN SPECIES 9 ENSACLG00000023481 ENSACLG00000023475 ENSACLG00000023474 ENSACLG00000023468 ENSACLG00000023445 cldn15la (ENSACLG00000023440) saga (ENSACLG00000023356) ENSACLG00000023343 ENSACLG00000023329 DUSP28 (ENSACLG00000023316) ENSACLG00000023326 ENSACLG00000023305 VCPIP1 (ENSACLG00000023296) ENSACLG00000023284 ENSACLG00000023260 ENSACLG00000023215 #22 ENSACLG00000023210 fam49ba (ENSACLG00000023192) #24 PHB2 (ENSACLG00000023179) ENSACLG00000023169 ptmab (ENSACLG00000023150) ENSACLG00000023138 ENSACLG00000023126 ENSACLG00000023052 ENSACLG00000023033 ENSACLG00000023018 ENSACLG00000022989 ENSACLG00000022932 dlg1b (ENSACLG00000022610) ENSACLG00000022505 RASAL2 (ENSACLG00000022472) Lyretail cichlid MODERN SPECIES 617 ENSNBRG00000004843 ENSNBRG00000004833 #22 ENSNBRG00000004822 fam49ba (ENSNBRG00000004785) #24 PHB2 (ENSNBRG00000004753) ENSNBRG00000004736 Midas cichlid MODERN SPECIES 748 ENSACIG00000023122 ENSACIG00000023156 #22 ENSACIG00000023162 fam49ba (ENSACIG00000023170) #24 PHB2 (ENSACIG00000023180) ptmaa (ENSACIG00000023189) Pomacentridae ANCESTRAL SPECIES 122 ENSGT00390000011144 #35 ENSGT00390000006307 ENSGT00950000182910.a.b.a ENSGT00940000156056.B.c.a ENSGT00940000156387 ENSGT00940000176074 ENSGT00500000044904.a.a.b.a.b ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT01010000223507 ENSGT00940000154474.C ENSGT00940000161528 ENSGT00390000002854 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 Pomacentridae_A ANCESTRAL SPECIES 124 ENSGT01100000263491.a.b.a.a.b.b.a ENSGT00390000011144 #35 ENSGT00390000006307 ENSGT00950000182910.a.b.a ENSGT00940000156056.B.c.a ENSGT00940000156387 ENSGT00940000176074 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b.b ENSGT01010000223507 ENSGT00940000155435.B.b.a ENSGT00940000154474.C ENSGT00940000161528 ENSGT00390000002854 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 Amphiprion ANCESTRAL SPECIES 152 ENSGT00390000011144 #35 ENSGT00390000006307 ENSGT00950000182910.a.b.a ENSGT00940000156056.B.c.a ENSGT00940000156387 ENSGT00940000176074 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b.b ENSGT01010000223507 ENSGT00940000155435.B.b.a ENSGT00940000154474.C ENSGT00940000161528 ENSGT01030000234576.D.a.b.a.a.a.a.a.b.f ENSGT00390000002854 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 Orange clownfish MODERN SPECIES 1 saga (ENSAPEG00000004037) ENSAPEG00000004099 ENSAPEG00000004119 ENSAPEG00000004134 ENSAPEG00000004162 DUSP28 (ENSAPEG00000004168) ENSAPEG00000004189 ENSAPEG00000004256 ENSAPEG00000004486 ENSAPEG00000005378 ENSAPEG00000005462 ENSAPEG00000005566 ENSAPEG00000005578 ENSAPEG00000005592 VCPIP1 (ENSAPEG00000005642) ENSAPEG00000005657 #22 fam49ba (ENSAPEG00000005679) #24 PHB2 (ENSAPEG00000005712) ptmab (ENSAPEG00000005747) ENSAPEG00000005769 ENSAPEG00000005793 dlg1b (ENSAPEG00000005923) ENSAPEG00000006120 RASAL2 (ENSAPEG00000006151) lamc1 (ENSAPEG00000006224) dhx9 (ENSAPEG00000006339) ENSAPEG00000006443 ENSAPEG00000006471 nmnat2 (ENSAPEG00000006544) ENSAPEG00000006650 ENSAPEG00000007141 Clown anemonefish MODERN SPECIES 860 saga (ENSAOCG00000022223) ENSAOCG00000022241 ENSAOCG00000022260 ENSAOCG00000022279 ENSAOCG00000022287 DUSP28 (ENSAOCG00000022298) ENSAOCG00000022375 ENSAOCG00000022402 ENSAOCG00000022675 VCPIP1 (ENSAOCG00000022721) ENSAOCG00000022734 #22 fam49ba (ENSAOCG00000022768) #24 PHB2 (ENSAOCG00000022789) Spiny chromis MODERN SPECIES 2029 ENSAPOG00000009170 ENSAPOG00000000256 #22 fam49ba (ENSAPOG00000009216) #24 PHB2 (ENSAPOG00000009243) Bicolor damselfish MODERN SPECIES 293 ENSSPAG00000010240 #22 fam49ba (ENSSPAG00000010215) #24 PHB2 (ENSSPAG00000010195) ptmab (ENSSPAG00000010180) ENSSPAG00000010172 ENSSPAG00000010105 ENSSPAG00000009990 ENSSPAG00000009960 ENSSPAG00000009948 ENSSPAG00000009906 ENSSPAG00000009895 ENSSPAG00000009887 RASAL2 (ENSSPAG00000009851) ENSSPAG00000009835 lamc1 (ENSSPAG00000009770) dhx9 (ENSSPAG00000009690) Percomorphaceae_C ANCESTRAL SPECIES 6 ENSGT00390000014380.h.b.b.i.a ENSGT00940000159409 ENSGT00500000044904.a.a.b.a.b ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT01010000223507 ENSGT00940000154505.B ENSGT01010000222847 ENSGT00940000154474.C ENSGT00940000161528 ENSGT00390000002854 ENSGT00670000098480 ENSGT00940000168894 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00940000164867.a ENSGT00940000157702 ENSGT00940000166185 ENSGT00940000155924.b ENSGT00940000160470 ENSGT00950000183179.a ENSGT00940000158333 ENSGT00940000171785 ENSGT01030000234824.C ENSGT01030000234557.A.e.b.f ENSGT00830000128446.a.d ENSGT01030000234557.A.e.a.b.b.a.b ENSGT01030000234557.A.e.a.b.b.b Eupercaria ANCESTRAL SPECIES 24 ENSGT00940000166734 ENSGT00390000014380.h.b.b.i.a ENSGT00500000044904.a.a.b.b ENSGT00500000044904.a.a.b.a.b ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154474.C ENSGT01010000223507 ENSGT00940000154505.B ENSGT00940000161528 ENSGT00390000002854 ENSGT00940000168894 ENSGT00670000098480 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 Eupecaria_A ANCESTRAL SPECIES 8 ENSGT00940000166734 ENSGT00390000014380.h.b.b.i.a ENSGT00500000044904.a.a.b.b ENSGT00500000044904.a.a.b.a.b ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154474.C ENSGT01010000223507 ENSGT00940000154505.B ENSGT00940000161528 ENSGT00390000002854 ENSGT00940000168894 ENSGT00670000098480 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 Ballan wrasse MODERN SPECIES 1320 ENSLBEG00000026213 ENSLBEG00000026227 ENSLBEG00000026252 #22 ENSLBEG00000026260 #24 Eupecaria_B ANCESTRAL SPECIES 8 ENSGT00940000156387 ENSGT00500000044904.a.a.a ENSGT00940000166734 ENSGT00390000014380.h.b.b.i.a ENSGT00500000044904.a.a.b.b ENSGT00500000044904.a.a.b.a.b ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154474.C ENSGT01010000223507 ENSGT00940000154505.B ENSGT00940000161528 ENSGT00390000002854 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 Perciformes ANCESTRAL SPECIES 5 ENSGT01090000260059.a.b.b.a.a.a.a.b.a.b.b.b ENSGT01090000259997.a.d.b.a.b.a.b.a ENSGT00390000006307 ENSGT00950000182910.a.b.a ENSGT00940000156056.B.c.a ENSGT00940000156387 ENSGT00940000166734 ENSGT00500000044904.a.a.b.a.b ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154474.C ENSGT00940000161528 ENSGT00390000002854 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00940000164867.a ENSGT00940000157702 ENSGT00940000166185 ENSGT00940000155924.b ENSGT00940000160470 ENSGT00950000183179.a ENSGT00940000158333 ENSGT00940000171785 ENSGT01030000234557.A.e.b.f.n.b ENSGT01030000234891.f ENSGT00390000014100.k.a ENSGT00940000153141.B.b ENSGT00940000162100 Perciformes_a ANCESTRAL SPECIES 17 ENSGT01090000260059.a.b.b.a.a.a.a.b.a.b.b.b ENSGT01090000259997.a.d.b.a.b.a.b.a ENSGT00390000006307 ENSGT00950000182910.a.b.a ENSGT00940000156056.B.c.a ENSGT00940000156387 ENSGT00940000166734 ENSGT00500000044904.a.a.b.a.b ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154474.C ENSGT00940000161528 ENSGT00390000002854 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a Pike perch MODERN SPECIES 366 ENSSLUG00000007572 #22 ENSSLUG00000007562 fam49ba (ENSSLUG00000007552) #24 PHB2 (ENSSLUG00000007226) ENSSLUG00000007192 Channel bull blenny MODERN SPECIES 99 VCPIP1 (ENSCGOG00000016311) ENSCGOG00000016297 #22 Eupecaria_C ANCESTRAL SPECIES 100 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 132 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a European seabass MODERN SPECIES 18 ENSDLAG00005006795 ENSDLAG00005003721 SMG7 (ENSDLAG00005002976) ENSDLAG00005015593 ENSDLAG00005031313 LAMC2 (ENSDLAG00005015577) ENSDLAG00005019285 ENSDLAG00005031931 ENSDLAG00005015967 ENSDLAG00005028823 ENSDLAG00005021799 ENSDLAG00005029279 ENSDLAG00005027411 ENSDLAG00005016529 ENSDLAG00005028940 ENSDLAG00005028683 #22 ENSDLAG00005004972 #24 ENSDLAG00005005078 ENSDLAG00005031466 ENSDLAG00005032848 ENSDLAG00005009846 ENSDLAG00005031684 ENSDLAG00005034288 ENSDLAG00005030825 ENSDLAG00005019159 ENSDLAG00005027609 proca (ENSDLAG00005028067) ENSDLAG00005019175 saga (ENSDLAG00005019201) ENSDLAG00005011325 cldn15la (ENSDLAG00005019586) Large yellow croaker MODERN SPECIES 1 hnrnpc (ENSLCRG00005001948) VCPIP1 (ENSLCRG00005001943) ENSLCRG00005001938 proca (ENSLCRG00005001931) ENSLCRG00005001912 saga (ENSLCRG00005001762) cldn15la (ENSLCRG00005001721) ENSLCRG00005001707 ENSLCRG00005001694 ENSLCRG00005001687 #22 fam49ba (ENSLCRG00005001670) #24 PHB2 (ENSLCRG00005001585) ENSLCRG00005001535 ENSLCRG00005001513 ENSLCRG00005001504 ENSLCRG00005001474 amotl2b (ENSLCRG00005001464) aire (ENSLCRG00005001451) rab6bb (ENSLCRG00005022934) ENSLCRG00005022932 KIF1A (ENSLCRG00005022852) agxtb (ENSLCRG00005022803) thap4 (ENSLCRG00005022795) bokb (ENSLCRG00005022793) elovl1a (ENSLCRG00005022792) Gilthead seabream MODERN SPECIES 13 ENSSAUG00010018379 dnaaf11 (ENSSAUG00010018377) #34 KCNQ3 (ENSSAUG00010018367) #32 HHLA1 (ENSSAUG00010018363) #31 OC90 (ENSSAUG00010018360) #30 ENSSAUG00010018354 #29 adcy8 (ENSSAUG00010017270) #27 ENSSAUG00010017253 MYO10 (ENSSAUG00010017110) MARCHF11 (ENSSAUG00010017098) ENSSAUG00010017096 ZNF622 (ENSSAUG00010017094) ENSSAUG00010017093 ENSSAUG00010017092 ENSSAUG00010007658 ENSSAUG00010007656 #22 fam49ba (ENSSAUG00010007651) #24 PHB2 (ENSSAUG00010007128) ENSSAUG00010007124 ENSSAUG00010007123 ENSSAUG00010007121 ENSSAUG00010007120 ENSSAUG00010004353 ENSSAUG00010004227 ENSSAUG00010004222 ENSSAUG00010004217 RASAL2 (ENSSAUG00010003917) ENSSAUG00010003905 ENSSAUG00010003903 dhx9 (ENSSAUG00010003877) LAMC2 (ENSSAUG00010003864) Percomorphaceae_D ANCESTRAL SPECIES 6 ENSGT00940000159409 ENSGT00390000014380.h.b.b.i.a ENSGT00940000166734 ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT01010000223507 ENSGT00940000154505.B ENSGT01010000222847 ENSGT00940000154474.C ENSGT00940000161528 ENSGT00390000002854 ENSGT00670000098480 ENSGT00940000168894 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT00500000044904.a.a.b.b ENSGT00940000164867.a ENSGT00940000157702 ENSGT00940000166185 ENSGT00940000155924.b ENSGT00940000160470 ENSGT00950000183179.a ENSGT00940000158333 ENSGT00940000171785 ENSGT01030000234824.C ENSGT01030000234557.A.e.b.f ENSGT01030000234557.B Anabantaria ANCESTRAL SPECIES 33 ENSGT00940000165457.a.b ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154505.B ENSGT01010000222847 ENSGT00940000154474.C ENSGT00940000161528 ENSGT00390000002854 ENSGT00670000098480 ENSGT00940000168894 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00510000048354 ENSGT00940000166734 ENSGT00390000014380.h.b.b.i.a ENSGT00940000159409 ENSGT00940000157702 ENSGT00940000166185 ENSGT00940000155924.b ENSGT00940000160470 ENSGT00950000183179.a ENSGT00940000158333 ENSGT00940000171785 ENSGT00390000014100.k.a ENSGT00940000153141.B.b Anabantoidei ANCESTRAL SPECIES 27 ENSGT00940000157169.d ENSGT01090000259987.a.b.d.b.a ENSGT00940000155003.e.b ENSGT00940000166125 ENSGT00730000114275 ENSGT00940000160228.i.b.h ENSGT00950000182860.a.a.b.a.a ENSGT00940000165457.a.b ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT01010000222847 ENSGT00940000154474.C ENSGT00940000161528 ENSGT00390000002854 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00510000048354 ENSGT00940000166734 ENSGT00390000014380.h.b.b.i.a ENSGT00500000044904.a.a.b.b ENSGT00940000164867.a ENSGT00940000157702 ENSGT00940000166185 ENSGT00940000155924.b ENSGT00940000160470 ENSGT00970000193381.a.a.a.a.a.b.b.c.b ENSGT00950000183179.a ENSGT00940000158333 ENSGT00940000171785 Climbing perch MODERN SPECIES 8 ENSATEG00000028124 ENSATEG00000008649 ENSATEG00000008674 ENSATEG00000008633 ENSATEG00000029352 ENSATEG00000008615 ENSATEG00000008113 ENSATEG00000008081 ENSATEG00000008357 ENSATEG00000028790 ENSATEG00000026369 ENSATEG00000028279 ENSATEG00000008037 ENSATEG00000007885 ENSATEG00000007819 ENSATEG00000007778 #22 ENSATEG00000007730 #24 ENSATEG00000007683 ENSATEG00000029836 ENSATEG00000027898 ENSATEG00000007408 ENSATEG00000007630 ENSATEG00000007584 ENSATEG00000007132 ENSATEG00000027831 ENSATEG00000007362 ENSATEG00000007101 LAMC2 (ENSATEG00000007094) ENSATEG00000007087 ENSATEG00000028675 nmnat2 (ENSATEG00000007042) Zig-zag eel MODERN SPECIES 8 ENSMAMG00000024636 ENSMAMG00000018200 ENSMAMG00000018215 ENSMAMG00000026898 ENSMAMG00000018297 ENSMAMG00000018260 ENSMAMG00000024495 ENSMAMG00000018241 ENSMAMG00000027971 ENSMAMG00000024826 ENSMAMG00000018360 ENSMAMG00000018284 ENSMAMG00000024530 ENSMAMG00000018368 ENSMAMG00000024645 ENSMAMG00000018387 #22 ENSMAMG00000018401 #24 ENSMAMG00000018425 ENSMAMG00000018452 ENSMAMG00000024559 ENSMAMG00000018506 ENSMAMG00000018597 ENSMAMG00000018628 ENSMAMG00000018644 LAMC2 (ENSMAMG00000018690) nmnat2 (ENSMAMG00000018698) smg7 (ENSMAMG00000018733) ENSMAMG00000018844 ENSMAMG00000007282 ENSMAMG00000007098 ENSMAMG00000007257 Carangaria ANCESTRAL SPECIES 5 ENSGT00940000156387 ENSGT00940000164867.a ENSGT00390000014380.h.b.b.i.a ENSGT00940000166734 ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154474.C ENSGT01010000223507 ENSGT00940000154505.B ENSGT00940000161528 ENSGT00390000002854 ENSGT00940000168894 ENSGT00670000098480 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 ENSGT00940000159409 ENSGT00940000157702 ENSGT00940000166185 ENSGT00940000155924.b ENSGT00940000160470 ENSGT00950000183179.a ENSGT00940000158333 ENSGT00940000171785 ENSGT00390000014100.k.a ENSGT00940000153141.B.b ENSGT00970000193381.a.a.a.a.a.b.b.c ENSGT00940000174899 Pleuronectoidei ANCESTRAL SPECIES 1 ENSGT01100000263533.b.b.a.a.a.a.a.b ENSGT00390000011144 #35 ENSGT00390000006307 ENSGT00950000182910.a.b.a ENSGT00940000156056.B.c.a ENSGT00940000156387 ENSGT00390000014380.h.b.b.i.a ENSGT00940000166734 ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT00940000154474.C ENSGT00940000161528 ENSGT00390000002854 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00940000159409 ENSGT00940000157702 ENSGT00940000166185 ENSGT00940000155924.b ENSGT00940000160470 ENSGT00950000183179.a ENSGT00940000158333 ENSGT01030000234557.A.e.b.f ENSGT00940000175566 ENSGT00390000014100.k.a ENSGT00940000153141.B.b ENSGT00940000155931.b ENSGT00940000165563.a Turbot MODERN SPECIES 19 cavin4a (ENSSMAG00000034898) ENSSMAG00000033946 ENSSMAG00000019861 ENSSMAG00000035033 ENSSMAG00000004616 ENSSMAG00000029657 ENSSMAG00000022213 ENSSMAG00000030740 cldn15la (ENSSMAG00000030377) ENSSMAG00000022169 ENSSMAG00000027991 ENSSMAG00000032936 ENSSMAG00000030609 ENSSMAG00000026034 ENSSMAG00000028387 ENSSMAG00000006767 #22 ENSSMAG00000006755 #24 ENSSMAG00000006717 ENSSMAG00000006671 ENSSMAG00000024538 ENSSMAG00000023268 ENSSMAG00000031677 ENSSMAG00000022591 lamc1 (ENSSMAG00000022929) dhx9 (ENSSMAG00000037435) LAMC2 (ENSSMAG00000031240) nmnat2 (ENSSMAG00000032779) SMG7 (ENSSMAG00000006067) ENSSMAG00000024031 ENSSMAG00000024186 ENSSMAG00000036161 Carangaria_A ANCESTRAL SPECIES 2 ENSGT00390000011144 #35 ENSGT00390000006307 ENSGT00950000182910.a.b.a ENSGT00940000156056.B.c.a ENSGT00940000156387 ENSGT00510000048354 ENSGT00940000166956 ENSGT00950000182887.C.b.a.m.a ENSGT00940000155435.B.b ENSGT01010000223507 ENSGT00940000154505.B ENSGT00940000161528 ENSGT00390000002854 ENSGT00940000168894 ENSGT00670000098480 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 Seriola ANCESTRAL SPECIES 211 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00950000183070.a.a.mb.a ENSGT00950000183307 Yellowtail amberjack DUPLICATION Yellowtail amberjack MODERN SPECIES 1986 ENSSLDG00000005966 #22 Yellowtail amberjack MODERN SPECIES 628 ENSSLDG00000005516 #22 Greater amberjack MODERN SPECIES 331 ENSSDUG00000023760 #22 fam49ba (ENSSDUG00000023759) #24 PHB2 (ENSSDUG00000023758) ptmab (ENSSDUG00000023757) Barramundi perch MODERN SPECIES 61 cldn15la (ENSLCAG00010006222) saga (ENSLCAG00010006228) ENSLCAG00010006237 ENSLCAG00010006240 proca (ENSLCAG00010006241) DUSP28 (ENSLCAG00010006246) ENSLCAG00010006251 ENSLCAG00010006259 ENSLCAG00010006267 VCPIP1 (ENSLCAG00010006269) ENSLCAG00010006273 ENSLCAG00010006287 ENSLCAG00010006302 ENSLCAG00010006311 ENSLCAG00010006358 ENSLCAG00010006377 #22 fam49ba (ENSLCAG00010006387) #24 PHB2 (ENSLCAG00010006417) ENSLCAG00010006461 mtnr1al (ENSLCAG00010006464) SLC36A1 (ENSLCAG00010006468) atox1 (ENSLCAG00010006472) sparc (ENSLCAG00010006486) g3bp1 (ENSLCAG00010006527) glra1 (ENSLCAG00010006550) Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 45 ENSMMDG00005010203 ENSMMDG00005010195 ENSMMDG00005010184 #22 ENSMMDG00005010181 #24 Pinecone sodierfish MODERN SPECIES 41 ENSMMDG00005010080 ENSMMDG00005010083 ENSMMDG00005010093 #22 Otomorpha ANCESTRAL SPECIES ENSGT00940000155285.b.i #22 Clupeiformes ANCESTRAL SPECIES 51 ENSGT00940000159119.b.f.a ENSGT00530000063891.cc ENSGT00940000159935.g.b ENSGT00580000081600.c.a ENSGT01010000222287.B.a.b.a.n.a ENSGT00940000155594.c.b ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d #25 ENSGT00940000165754 ENSGT00940000158259.a ENSGT00390000009194 ENSGT01050000244890.a.b.b.d ENSGT00940000158945.u.b ENSGT00390000014069.a ENSGT01030000234607.A.a.a.b Denticle herring MODERN SPECIES 14 pter (ENSDCDG00000000902) CACNA1E (ENSDCDG00000001393) abcd4 (ENSDCDG00000014926) pak1ip1 (ENSDCDG00000015343) KLHL14 (ENSDCDG00000015350) dtna (ENSDCDG00000015359) mapre2 (ENSDCDG00000015363) ENSDCDG00000015366 cebpd (ENSDCDG00000015370) ENSDCDG00000015694 ENSDCDG00000015696 amph (ENSDCDG00000015718) otulinb (ENSDCDG00000015911) ankhb (ENSDCDG00000015960) ENSDCDG00000015989 #22 ENSDCDG00000015995 #22 fam49ba (ENSDCDG00000016053) #24 asap1a (ENSDCDG00000016806) #25 ubtfl (ENSDCDG00000017241) slc4a2a (ENSDCDG00000017277) ttc19 (ENSDCDG00000017901) faim2a (ENSDCDG00000017904) abcf2a (ENSDCDG00000017915) SMARCD3 (ENSDCDG00000018091) tmub1 (ENSDCDG00000018147) NCBP2AS2 (ENSDCDG00000018150) ENSDCDG00000018210 ENSDCDG00000021115 ENSDCDG00000021126 ENSDCDG00000021150 ENSDCDG00000021160 Actinopterygii ANCESTRAL SPECIES 271 ENSGT00940000165526 ENSGT00940000155285.b.j #22 ENSGT00390000015159.b #24 ENSGT00940000158547 #25 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00530000064699 #31 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000011144 #35 ENSGT00390000006307 ENSGT00940000164265.C ENSGT00950000182910.a.b ENSGT00940000156056.B Reedfish MODERN SPECIES 14 ENSECRG00000006177 ENSECRG00000006182 ENSECRG00000006189 ENSECRG00000006197 ENSECRG00000006204 ENSECRG00000006210 ENSECRG00000006212 ENSECRG00000006215 ENSECRG00000006223 GPR158 (ENSECRG00000006251) THNSL1 (ENSECRG00000006314) enkur (ENSECRG00000006319) prtfdc1b (ENSECRG00000006325) ARHGAP21 (ENSECRG00000006343) KIAA1217 (ENSECRG00000006380) ENSECRG00000006399 #22 fam49bb (ENSECRG00000006425) #24 eef1a1l3 (ENSECRG00000006451) asap1a (ENSECRG00000006531) #25 adcy8 (ENSECRG00000007022) #27 Neopterygii ANCESTRAL SPECIES 203 ENSGT00730000111020.b.a ENSGT00940000153725.a.b.b ENSGT00940000158957 ENSGT00940000157305 ENSGT00390000004118 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.a ENSGT00950000182882.A.b.a ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189 ENSGT00940000155285.b.j #22 ENSGT00390000015159.b #24 ENSGT00940000165526 ENSGT00940000158547 #25 ENSGT00940000156325 Spotted gar MODERN SPECIES 675 epdr1 (ENSLOCG00000011436) stard3nl (ENSLOCG00000011426) ENSLOCG00000011415 TRGV9 (ENSLOCG00000018133) ENSLOCG00000011411 TRGV9 (ENSLOCG00000011394) ENSLOCG00000011384 ENSLOCG00000011374 ENSLOCG00000011369 amph (ENSLOCG00000011353) vps41 (ENSLOCG00000011337) POU6F2 (ENSLOCG00000011317) otulina (ENSLOCG00000011304) otulinb (ENSLOCG00000011294) ankhb (ENSLOCG00000011283) myca (ENSLOCG00000011270) #22 fam49bb (ENSLOCG00000011261) #24 eef1a1l3 (ENSLOCG00000011245) asap1a (ENSLOCG00000011231) #25 NFX1 (ENSLOCG00000011211) ENSLOCG00000011201 ENSLOCG00000011184 chmp5b (ENSLOCG00000011176) bag1 (ENSLOCG00000011163) FASTKD3 (ENSLOCG00000011153) myl12.1 (ENSLOCG00000011144) myom1a (ENSLOCG00000011117) LPIN2 (ENSLOCG00000011093) EMILIN2 (ENSLOCG00000011086) SMCHD1 (ENSLOCG00000011069) METTL4 (ENSLOCG00000011054) Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000155285.b.j.a.a #22 Clupeocephala ANCESTRAL SPECIES 848 ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 Otomorpha ANCESTRAL SPECIES 3 ENSGT01030000234667.a.a.a.b.b ENSGT00940000157353 ENSGT00940000157414 ENSGT00940000164239.b.a ENSGT00940000156907.p.a.a ENSGT00500000045505.a ENSGT00940000166973 ENSGT00730000111020.b.a ENSGT00940000157305 ENSGT00390000004118 ENSGT00940000161910 ENSGT00940000155476 ENSGT01040000240698 ENSGT00950000182882.A.b.a ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d #25 ENSGT00940000165754 ENSGT00940000158259.a ENSGT00390000009194 ENSGT00940000158945.u.b ENSGT00390000014069.a ENSGT01030000234607.A.a.a.b ENSGT00910000148338 ENSGT00940000157026 ENSGT00940000159820 ENSGT00930000151367.d.a ENSGT01030000234667.a.a.b.f ENSGT00990000210078 ENSGT00940000155562.l.a Otophysi ANCESTRAL SPECIES 35 ENSGT00940000157414 ENSGT00940000164239.b.a ENSGT00940000156907.p.a.a ENSGT00500000045505.a ENSGT00940000166973 ENSGT00730000111020.b.a ENSGT00940000157305 ENSGT00390000004118 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.a ENSGT00940000168125.a ENSGT01040000240698 ENSGT00950000182882.A.b.a ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d #25 ENSGT00940000165754 ENSGT00940000158259.a ENSGT00390000009194 ENSGT00940000158945.u.b ENSGT00390000014069.a ENSGT01030000234607.A.a.a.b ENSGT00910000148338 ENSGT00940000157026 ENSGT00940000159820 ENSGT00930000151367.d.a ENSGT01030000234667.a.a.b.f ENSGT00990000210078 ENSGT00940000155562.l.a Characiphysae ANCESTRAL SPECIES 17 ENSGT01000000214711 ENSGT01030000235347 ENSGT00940000165265.g.b ENSGT00950000183071.a.a.b.c.d ENSGT01090000260003.a.b.b.a.a.b.a.a ENSGT01090000260003.a.b.b.a.a.b.a.b.b ENSGT00950000183019.f.a.c.b ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d #25 ENSGT00940000165754 ENSGT00940000158259.a ENSGT00390000009194 ENSGT00940000158945.u.b ENSGT00390000014069.a ENSGT01030000234607.A.a.a.b ENSGT00940000155594.c.a ENSGT00940000160430 ENSGT00390000004989.a.b ENSGT00940000157026 ENSGT00940000159820 ENSGT00930000151367.d.a ENSGT01030000234667.a.a.b.f Channel catfish MODERN SPECIES 26 nol7 (ENSIPUG00000003294) ranbp9 (ENSIPUG00000003260) rnf182 (ENSIPUG00000003254) fam134b (ENSIPUG00000003244) and2 (ENSIPUG00000003230) lrrcc1 (ENSIPUG00000003192) e2f5 (ENSIPUG00000003147) ENSIPUG00000003132 ENSIPUG00000003117 ENSIPUG00000003102 ENSIPUG00000003088 ENSIPUG00000003049 amph (ENSIPUG00000003003) otulinb (ENSIPUG00000002966) ankh (ENSIPUG00000002921) mycb (ENSIPUG00000002912) #22 FAM49B (ENSIPUG00000002877) #24 asap1a (ENSIPUG00000002793) #25 ubtf-b (ENSIPUG00000002725) slc4a2 (ENSIPUG00000002664) ttc19 (ENSIPUG00000002645) abcf2a (ENSIPUG00000002588) smarcd3 (ENSIPUG00000002567) tmub1 (ENSIPUG00000002554) FASTK (ENSIPUG00000002527) ENSIPUG00000002519 ENSIPUG00000002517 ENSIPUG00000002512 puf60a (ENSIPUG00000002453) NRBP2 (ENSIPUG00000002430) klhl18 (ENSIPUG00000002418) Characiphysae_b ANCESTRAL SPECIES 51 ENSGT01000000214711 ENSGT01030000235347 ENSGT00940000165265.g.b ENSGT00950000183071.a.a.b.c.d ENSGT01090000260003.a.b.b.a.a.b.a.a ENSGT01090000260003.a.b.b.a.a.b.a.b.b ENSGT00950000183019.f.a.c.b ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d #25 ENSGT00940000165754 ENSGT00940000158259.a ENSGT00390000009194 ENSGT00940000158945.u.b ENSGT00390000014069.a ENSGT01030000234607.A.a.a.b Characoidei ANCESTRAL SPECIES 288 ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d #25 ENSGT00940000165754 ENSGT00940000158259.a Red-bellied piranha MODERN SPECIES 228 rnf182 (ENSPNAG00000006964) ranbp9 (ENSPNAG00000026030) ENSPNAG00000025956 epdr1 (ENSPNAG00000025870) stard3nl (ENSPNAG00000005862) ENSPNAG00000025823 ENSPNAG00000025810 ENSPNAG00000025796 ENSPNAG00000025791 ENSPNAG00000006823 ENSPNAG00000025763 ENSPNAG00000005565 amph (ENSPNAG00000025681) otulinb (ENSPNAG00000025323) ankhb (ENSPNAG00000005195) mycb (ENSPNAG00000025234) #22 fam49ba (ENSPNAG00000025218) #24 asap1a (ENSPNAG00000025166) #25 ubtfl (ENSPNAG00000024974) Mexicana tetra MODERN SPECIES 7 rnf182 (ENSAMXG00000026266) ENSAMXG00000032677 ranbp9 (ENSAMXG00000014208) ENSAMXG00000014164 epdr1 (ENSAMXG00000014150) stard3nl (ENSAMXG00000014135) ENSAMXG00000040160 ENSAMXG00000033206 ENSAMXG00000038365 ENSAMXG00000043146 ENSAMXG00000006256 ENSAMXG00000030798 amph (ENSAMXG00000006239) otulinb (ENSAMXG00000006217) ankhb (ENSAMXG00000030055) mycb (ENSAMXG00000043266) #22 ENSAMXG00000038211 ENSAMXG00000040512 ENSAMXG00000033811 ENSAMXG00000042018 fam49ba (ENSAMXG00000012050) #24 ENSAMXG00000040799 asap1a (ENSAMXG00000012149) #25 ubtfl (ENSAMXG00000012391) slc4a2a (ENSAMXG00000012634) arhgef18a (ENSAMXG00000001648) sppl2 (ENSAMXG00000001631) ENSAMXG00000040439 ENSAMXG00000030945 ENSAMXG00000001584 ENSAMXG00000006318 Electric eel MODERN SPECIES 774 ENSEEEG00000022992 amph (ENSEEEG00000022993) otulinb (ENSEEEG00000022997) ankhb (ENSEEEG00000022998) mycb (ENSEEEG00000022999) #22 Cyprinoidei ANCESTRAL SPECIES 20 ENSGT00940000157414 ENSGT00940000164239.b.a ENSGT00940000156907.p.a.a ENSGT00500000045505.a ENSGT00940000166973 ENSGT00730000111020.b.a ENSGT00940000157305 ENSGT00390000004118 ENSGT00940000161910 ENSGT00940000155476 ENSGT01040000240698.d.a ENSGT00950000182882.A.b.a ENSGT00940000168125.a.j ENSGT01040000240698.c ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d #25 ENSGT00940000165754 ENSGT00940000158259.a ENSGT00390000009194 ENSGT00940000158945.u.b ENSGT00390000014069.a ENSGT01030000234607.A.a.a.b ENSGT00540000073577 ENSGT00940000155594.c.a ENSGT00940000160430 ENSGT00400000024709.g ENSGT00400000024709.h.a ENSGT00940000157026.f ENSGT00940000159820 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 287 ENSGT01030000234667.a.a.a.b.b.a ENSGT00940000157353.hb.b ENSGT00940000157414.b ENSGT00940000164239.b.a.a.a ENSGT00500000045505.a.a ENSGT00940000166973.b ENSGT00730000111020.b.a.j ENSGT00940000157305.c ENSGT00390000004118.h ENSGT00940000161910.c ENSGT00940000155476.cb ENSGT01040000240698.d.a ENSGT00950000182882.A.b.a.v ENSGT00390000009802.b.f.a ENSGT00390000012189.c.a.b.a ENSGT00940000155285.b.j.a.a.a #22 ENSGT00390000015159.b.b.a #24 ENSGT00940000158547.d.c #25 Cyprininae_a ANCESTRAL SPECIES 334 ENSGT00940000157414.b ENSGT00940000164239.b.a.b ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a.a.a ENSGT00500000045505.a.a ENSGT00940000166973.b ENSGT00730000111020.b.a.j ENSGT00940000157305.c ENSGT00390000004118.h ENSGT00940000161910.c ENSGT00940000155476.cb ENSGT01040000240698.d.a ENSGT00950000182882.A.b.a.v ENSGT00390000009802.b.f.a ENSGT00390000012189.c.a.b.a ENSGT00940000155285.b.j.a.a.a #22 ENSGT00390000015159.b.b.a.b #24 ENSGT00390000015159.b.b.a.a #24 ENSGT00940000158547.d.c #25 ENSGT00940000158259.a.c ENSGT00390000009194.e ENSGT01050000244890.a.b.b.d.a ENSGT00630000089910.l.b ENSGT00940000158945.u.b.b ENSGT00390000014069.a.f ENSGT01030000234607.A.a.a.b.h ENSGT00540000073577.b ENSGT00940000155594.c.a.b Golden-line barbel MODERN SPECIES 20 LRRCC1 (ENSSGRG00000024030) ENSSGRG00000024033 ENSSGRG00000024034 and2 (ENSSGRG00000024035) ENSSGRG00000024036 ranbp9 (ENSSGRG00000024049) ENSSGRG00000024293 epdr1 (ENSSGRG00000024295) stard3nl (ENSSGRG00000024296) ENSSGRG00000024298 ENSSGRG00000024299 ENSSGRG00000024302 amph (ENSSGRG00000024307) otulinb (ENSSGRG00000024347) ankhb (ENSSGRG00000024351) mycb (ENSSGRG00000024602) #22 fam49ba (ENSSGRG00000024624) #24 asap1a (ENSSGRG00000025451) #25 slc4a2a (ENSSGRG00000029299) ttc19 (ENSSGRG00000029304) faim2a (ENSSGRG00000029305) abcf2a (ENSSGRG00000029319) SMARCD3 (ENSSGRG00000029506) tmub1 (ENSSGRG00000031104) fastk (ENSSGRG00000031105) si:dkeyp-73d8.9 (ENSSGRG00000031106) puf60a (ENSSGRG00000031107) ENSSGRG00000031108 NRBP2 (ENSSGRG00000031111) ENSSGRG00000031114 ENSSGRG00000031115 Common carp reference MODERN SPECIES 21 ENSCCRG00000044073 ENSCCRG00000044075 e2f5 (ENSCCRG00000053650) ENSCCRG00000072875 ENSCCRG00000044084 and2 (ENSCCRG00000048628) ENSCCRG00000048632 rnf182 (ENSCCRG00000001597) ENSCCRG00000081157 ranbp9 (ENSCCRG00000024803) stard3nl (ENSCCRG00000031394) ENSCCRG00000031393 amph (ENSCCRG00000041767) otulinb (ENSCCRG00000048943) ankhb (ENSCCRG00000073557) mycb (ENSCCRG00000053008) #22 fam49ba (ENSCCRG00000016565) #24 asap1a (ENSCCRG00000014650) #25 slc4a2a (ENSCCRG00000049883) ttc19 (ENSCCRG00000051720) faim2a (ENSCCRG00000075639) abcf2a (ENSCCRG00000046795) ENSCCRG00000043830 tmub1 (ENSCCRG00000030629) fastk (ENSCCRG00000006519) ENSCCRG00000063650 ENSCCRG00000006499 puf60a (ENSCCRG00000006409) ENSCCRG00000051732 klhl18 (ENSCCRG00000051737) bfsp2 (ENSCCRG00000051742) Goldfish DUPLICATION Goldfish MODERN SPECIES 1884 otulinb (ENSCARG00000038291) ankhb (ENSCARG00000038046) mycb (ENSCARG00000038024) #22 Goldfish MODERN SPECIES 11 ENSCARG00000000618 ENSCARG00000000645 e2f5 (ENSCARG00000000662) ENSCARG00000000666 ENSCARG00000000670 and2 (ENSCARG00000000681) ENSCARG00000000694 rnf182 (ENSCARG00000000705) ranbp9 (ENSCARG00000000834) ENSCARG00000001095 stard3nl (ENSCARG00000001099) ENSCARG00000001105 amph (ENSCARG00000001133) otulinb (ENSCARG00000001177) ankhb (ENSCARG00000001180) mycb (ENSCARG00000001195) #22 tmem53 (ENSCARG00000001198) opn4.1 (ENSCARG00000001202) ENSCARG00000001213 ccr9a (ENSCARG00000001258) bfsp2 (ENSCARG00000001263) klhl18 (ENSCARG00000001273) fam49ba (ENSCARG00000001285) #24 asap1a (ENSCARG00000001505) #25 ubtfl (ENSCARG00000003703) slc4a2a (ENSCARG00000004906) faim2a (ENSCARG00000008082) ABCF2a (ENSCARG00000008106) SMARCD3 (ENSCARG00000008471) tmub1 (ENSCARG00000008674) fastk (ENSCARG00000008680) Cyprininae ANCESTRAL SPECIES 18 ENSGT00940000157414.a ENSGT00940000164239.b.a.b ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a.a.b ENSGT00500000045505.a.b ENSGT00940000166973.a ENSGT00730000111020.b.a.i ENSGT00940000157305.d ENSGT00390000004118.g ENSGT00940000161910.d ENSGT00940000155476.bb ENSGT01040000240698.d.b ENSGT00950000182882.A.b.a.u ENSGT00390000009802.b.f.b ENSGT00390000012189.c.a.a ENSGT00940000155285.b.j.a.a.b #22 ENSGT00390000015159.b.b.b #24 ENSGT00940000158547.d.d #25 ENSGT00940000165754 ENSGT00940000158259.a.d ENSGT00390000009194.f ENSGT01050000244890.a.b.b.d.b ENSGT00630000089910.l.a ENSGT00940000158945.u.b.a ENSGT00390000014069.a.e ENSGT01030000234607.A.a.a.b.g ENSGT00540000073577.a ENSGT00940000155594.c.a.a.a.a ENSGT00940000160430.gb.b ENSGT00940000157026.f.b ENSGT00940000159820.a Goldfish MODERN SPECIES 19 ACKR4 (ENSCARG00000014854) e2f5 (ENSCARG00000014840) LRRCC1 (ENSCARG00000014820) ENSCARG00000014801 and2 (ENSCARG00000014793) ENSCARG00000014782 rnf182 (ENSCARG00000014779) ranbp9 (ENSCARG00000012772) epdr1 (ENSCARG00000012670) stard3nl (ENSCARG00000012667) ENSCARG00000012663 ENSCARG00000012654 amph (ENSCARG00000012413) otulinb (ENSCARG00000012349) ankhb (ENSCARG00000012311) mycb (ENSCARG00000012297) #22 fam49ba (ENSCARG00000012256) #24 asap1a (ENSCARG00000011310) #25 slc4a2a (ENSCARG00000004935) ttc19 (ENSCARG00000004598) faim2a (ENSCARG00000004568) abcf2a (ENSCARG00000004341) SMARCD3 (ENSCARG00000004145) fastk (ENSCARG00000004071) ENSCARG00000004041 ENSCARG00000004029 ENSCARG00000004013 puf60a (ENSCARG00000043435) NRBP2 (ENSCARG00000042280) klhl18 (ENSCARG00000042181) bfsp2 (ENSCARG00000042105) Cyprininae_a ANCESTRAL SPECIES 4 ENSGT00440000033408.a.b ENSGT00950000183138.a.a.b.v.b.a ENSGT01030000234667.a.a.a.b.b.b ENSGT00940000157353.hb.a ENSGT00940000157414.a ENSGT00940000164239.b.a.a.b ENSGT00500000045505.a.b ENSGT00940000166973.a ENSGT00730000111020.b.a.i ENSGT00940000157305.d ENSGT00390000004118.g ENSGT00940000161910.d ENSGT00940000155476.bb ENSGT01040000240698.d.b ENSGT00390000012189.c.a.a ENSGT00940000155285.b.j.a.a.b #22 ENSGT00390000015159.b.b.b #24 ENSGT00940000158547.d.d #25 ENSGT00940000165754 ENSGT00940000158259.a.d ENSGT00390000009194.f ENSGT01050000244890.a.b.b.d.b ENSGT00630000089910.l.a ENSGT00940000158945.u.b.a ENSGT00390000014069.a.e ENSGT01030000234607.A.a.a.b.g ENSGT00540000073577.a ENSGT00940000155594.c.a.a.a.a ENSGT00940000160430.gb.b ENSGT00940000157026.f.b ENSGT00940000159820.a Common carp reference MODERN SPECIES 29 ENSCCRG00000033060 ENSCCRG00000003732 ENSCCRG00000033053 e2f5 (ENSCCRG00000031231) ENSCCRG00000031222 ENSCCRG00000048172 and2 (ENSCCRG00000048174) ENSCCRG00000026245 ENSCCRG00000024790 ENSCCRG00000053904 ENSCCRG00000066881 ENSCCRG00000024769 ENSCCRG00000023311 ENSCCRG00000067374 ankhb (ENSCCRG00000016579) mycb (ENSCCRG00000016571) #22 fam49ba (ENSCCRG00000020924) #24 asap1a (ENSCCRG00000020925) #25 ubtfl (ENSCCRG00000049799) slc4a2a (ENSCCRG00000001512) ttc19 (ENSCCRG00000046806) faim2a (ENSCCRG00000046799) abcf2a (ENSCCRG00000070342) ENSCCRG00000006534 tmub1 (ENSCCRG00000006525) fastk (ENSCCRG00000048267) ENSCCRG00000006464 ENSCCRG00000082761 ENSCCRG00000006459 puf60a (ENSCCRG00000081058) ENSCCRG00000004463 Golden-line barbel MODERN SPECIES 4 ENSSGRG00000034293 ENSSGRG00000034292 and2 (ENSSGRG00000034291) ENSSGRG00000034289 rnf182 (ENSSGRG00000034286) ranbp9 (ENSSGRG00000034238) ENSSGRG00000034237 epdr1 (ENSSGRG00000034236) stard3nl (ENSSGRG00000034233) ENSSGRG00000034232 ENSSGRG00000034231 ENSSGRG00000034230 ENSSGRG00000033441 ENSSGRG00000033432 ankhb (ENSSGRG00000033411) mycb (ENSSGRG00000033410) #22 fam49ba (ENSSGRG00000033409) #24 asap1a (ENSSGRG00000032781) #25 ubtfl (ENSSGRG00000032123) ENSSGRG00000032122 serpinb1l2 (ENSSGRG00000032121) ENSSGRG00000032120 cdca4 (ENSSGRG00000032119) si:dkey-177p2.6 (ENSSGRG00000032118) sel1l (ENSSGRG00000031322) chga (ENSSGRG00000031315) itpk1a (ENSSGRG00000031284) si:dkeyp-55f12.3 (ENSSGRG00000031283) ubr7 (ENSSGRG00000031224) btbd7 (ENSSGRG00000031219) ENSSGRG00000031218 Zebrafish MODERN SPECIES 11 ENSDARG00000105200 ENSDARG00000103890 ENSDARG00000100445 ENSDARG00000098274 ENSDARG00000101672 ENSDARG00000100191 ENSDARG00000103544 ENSDARG00000099268 ENSDARG00000101768 ENSDARG00000102001 ENSDARG00000098423 ENSDARG00000100554 amph (ENSDARG00000007663) otulinb (ENSDARG00000079886) ankhb (ENSDARG00000014969) mycb (ENSDARG00000007241) #22 ENSDARG00000094081 fam49ba (ENSDARG00000020929) #24 asap1a (ENSDARG00000029463) #25 ubtfl (ENSDARG00000038780) slc4a2a (ENSDARG00000028173) ttc19 (ENSDARG00000074435) faim2a (ENSDARG00000038784) abcf2a (ENSDARG00000038785) SMARCD3 (ENSDARG00000038786) tmub1 (ENSDARG00000038787) fastk (ENSDARG00000077075) si:dkeyp-73d8.6 (ENSDARG00000079589) ENSDARG00000094045 si:dkeyp-73d8.9 (ENSDARG00000076043) puf60a (ENSDARG00000032175) Clupeiformes ANCESTRAL SPECIES 51 ENSGT00390000003759 ENSGT00940000159119.b.f.a ENSGT00530000063891.cc ENSGT00940000159935.g.b ENSGT00580000081600.c.a ENSGT01010000222287.B.a.b.a.n.a ENSGT00940000155594.c.b ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 ENSGT00940000155285.b.i #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d #25 ENSGT00940000165754 ENSGT00940000158259.a ENSGT00390000009194 ENSGT01050000244890.a.b.b.d ENSGT00940000158945.u.b ENSGT00390000014069.a ENSGT01030000234607.A.a.a.b Atlantic herring MODERN SPECIES 17 ENSCHAG00000022864 ENSCHAG00000022858 ranbp9 (ENSCHAG00000022809) ENSCHAG00000022798 ENSCHAG00000022787 ENSCHAG00000022783 ENSCHAG00000022776 rnf182 (ENSCHAG00000022766) ranbp9 (ENSCHAG00000022521) ENSCHAG00000022467 epdr1 (ENSCHAG00000022453) stard3nl (ENSCHAG00000022402) amph (ENSCHAG00000022103) otulinb (ENSCHAG00000022042) ankhb (ENSCHAG00000021846) mycb (ENSCHAG00000021836) #22 fam49ba (ENSCHAG00000021698) #24 asap1a (ENSCHAG00000019373) #25 ubtfl (ENSCHAG00000019118) slc4a2a (ENSCHAG00000017259) ttc19 (ENSCHAG00000017081) faim2a (ENSCHAG00000017070) abcf2a (ENSCHAG00000016620) SMARCD3 (ENSCHAG00000016436) tmub1 (ENSCHAG00000016426) fastk (ENSCHAG00000016408) ENSCHAG00000016396 ENSCHAG00000016049 MYOC (ENSCHAG00000016033) PLPP6 (ENSCHAG00000016012) PRDX6 (ENSCHAG00000015958) Euteleosteomorpha ANCESTRAL SPECIES 627 ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 Protacanthopterygii ANCESTRAL SPECIES 128 ENSGT00390000004118 ENSGT00940000157305 ENSGT00730000111020.b.a ENSGT00940000166973 ENSGT00390000018047 ENSGT00940000160025 ENSGT00940000155469 ENSGT01030000235074 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159042 #30 ENSGT00940000178875 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d #25 ENSGT00390000014069.a Salmoninae ANCESTRAL SPECIES 270 ENSGT00950000182882.A.b.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00390000004118 ENSGT00940000157305 ENSGT00730000111020.b.a ENSGT00940000166973 ENSGT00390000018047 ENSGT00940000155469 ENSGT01030000235074 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d.a #25 Salmoninae_a ANCESTRAL SPECIES 2 ENSGT00950000182882.A.b.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00390000004118 ENSGT00940000157305 ENSGT00730000111020.b.a ENSGT00940000166973 ENSGT00390000018047 ENSGT00940000155469 ENSGT01030000235074 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d.a #25 ENSGT00390000014069.a ENSGT00940000155594.c.a ENSGT00940000157026 Oncorhynchus ANCESTRAL SPECIES 11 ENSGT00950000182882.A.b.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00390000004118 ENSGT00940000157305 ENSGT00730000111020.b.a ENSGT00940000166973 ENSGT00390000018047 ENSGT00940000155469 ENSGT01030000235074 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d.a #25 ENSGT00390000014069.a ENSGT00940000155594.c.a ENSGT00940000157026 Oncorhynchus_a ANCESTRAL SPECIES 94 ENSGT00950000182882.A.b.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00390000004118 ENSGT00940000157305 ENSGT00730000111020.b.a ENSGT00940000166973 ENSGT00390000018047 ENSGT00940000155469 ENSGT01030000235074 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d.a #25 ENSGT00390000014069.a ENSGT00940000155594.c.a ENSGT00940000157026 Coho salmon MODERN SPECIES 23 stard3nl (ENSOKIG00005047716) epdr1 (ENSOKIG00005047725) ENSOKIG00005047734 ranbp9 (ENSOKIG00005047776) ENSOKIG00005047973 rnf182 (ENSOKIG00005047977) ZNF622 (ENSOKIG00005047987) MYO10 (ENSOKIG00005048055) adcy8 (ENSOKIG00005048303) #27 ENSOKIG00005048453 efr3a (ENSOKIG00005048493) #29 KCNQ3 (ENSOKIG00005048636) #32 dnaaf11 (ENSOKIG00005048714) #34 ENSOKIG00005048729 ankhb (ENSOKIG00005048733) mycb (ENSOKIG00005048742) #22 fam49ba (ENSOKIG00005048771) #24 ENSOKIG00005048827 asap1a (ENSOKIG00005049049) #25 tmub1 (ENSOKIG00005049856) klhl18 (ENSOKIG00005049885) INHBA (ENSOKIG00005049972) ENSOKIG00005050202 ENSOKIG00005050592 ENSOKIG00005050610 ENSOKIG00005050629 adipoqb (ENSOKIG00005050638) ENSOKIG00005050648 ENSOKIG00005050701 ENSOKIG00005050744 ENSOKIG00005050748 Chinook salmon MODERN SPECIES 29 amd1 (ENSOTSG00005023755) rpf2 (ENSOTSG00005023753) epdr1 (ENSOTSG00005023751) ENSOTSG00005023750 ranbp9 (ENSOTSG00005023154) rnf182 (ENSOTSG00005023150) ENSOTSG00005023149 ZNF622 (ENSOTSG00005023148) MYO10 (ENSOTSG00005022737) ENSOTSG00005022733 adcy8 (ENSOTSG00005021572) #27 efr3a (ENSOTSG00005018340) #29 KCNQ3 (ENSOTSG00005018316) #32 dnaaf11 (ENSOTSG00005018291) #34 ankhb (ENSOTSG00005018282) mycb (ENSOTSG00005018280) #22 slc16a10 (ENSOTSG00005018279) mfsd4b (ENSOTSG00005018276) REV3L (ENSOTSG00005018260) ENSOTSG00005018251 fynb (ENSOTSG00005018238) ENSOTSG00005018236 ccn6 (ENSOTSG00005018221) TUBE1 (ENSOTSG00005018218) ENSOTSG00005017248 marcksa (ENSOTSG00005017242) HS3ST5 (ENSOTSG00005017239) FRK (ENSOTSG00005017238) COL10A1 (ENSOTSG00005017237) nt5dc1 (ENSOTSG00005016844) dse (ENSOTSG00005016842) Rainbow trout MODERN SPECIES 29 stard3nl (ENSOMYG00000010425) epdr1 (ENSOMYG00000010413) ENSOMYG00000010406 ranbp9 (ENSOMYG00000010207) rnf182 (ENSOMYG00000009958) ENSOMYG00000009931 ENSOMYG00000009915 ENSOMYG00000009503 ENSOMYG00000008653 adcy8 (ENSOMYG00000008286) #27 efr3a (ENSOMYG00000007139) #29 KCNQ3 (ENSOMYG00000005998) #32 dnaaf11 (ENSOMYG00000005775) #34 ENSOMYG00000005606 ENSOMYG00000005586 ENSOMYG00000005527 #22 ENSOMYG00000005129 #24 ENSOMYG00000060455 ENSOMYG00000004775 ENSOMYG00000004401 ENSOMYG00000003892 ENSOMYG00000064092 ENSOMYG00000054475 ENSOMYG00000062400 ENSOMYG00000063278 ENSOMYG00000058397 ENSOMYG00000003853 ENSOMYG00000003808 ENSOMYG00000053109 OSTM1 (ENSOMYG00000003696) ENSOMYG00000003617 Salmo ANCESTRAL SPECIES 35 ENSGT00950000182882.A.b.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00390000004118 ENSGT00940000157305.k ENSGT00730000111020.b.a ENSGT00940000166973 ENSGT00390000018047 ENSGT00940000155469 ENSGT01030000235074 ENSGT00940000158742 #27 ENSGT00390000002143.a #29 ENSGT00940000159760 #32 ENSGT00940000158506 #34 ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a #22 ENSGT00390000015159.b.b #24 ENSGT00940000158547.d.a #25 ENSGT00390000014069.a ENSGT00940000155594.c.a ENSGT00940000157026 River trout MODERN SPECIES 13 stard3nl (ENSSTUG00000034792) epdr1 (ENSSTUG00000034783) ENSSTUG00000034763 ranbp9 (ENSSTUG00000034677) rnf182 (ENSSTUG00000034667) ENSSTUG00000034652 ZNF622 (ENSSTUG00000034629) MYO10 (ENSSTUG00000031856) ENSSTUG00000031703 adcy8 (ENSSTUG00000030965) #27 efr3a (ENSSTUG00000030391) #29 KCNQ3 (ENSSTUG00000029599) #32 dnaaf11 (ENSSTUG00000029555) #34 rnf170 (ENSSTUG00000029535) ankhb (ENSSTUG00000029451) mycb (ENSSTUG00000029438) #22 ENSSTUG00000029435 fam49ba (ENSSTUG00000029089) #24 asap1a (ENSSTUG00000028518) #25 tmub1 (ENSSTUG00000028482) ENSSTUG00000028478 ENSSTUG00000027982 Atlantic salmon MODERN SPECIES 5 stard3nl (ENSSSAG00000046119) epdr1 (ENSSSAG00000106268) nol7 (ENSSSAG00000046081) ranbp9 (ENSSSAG00000045902) rnf182 (ENSSSAG00000045881) ENSSSAG00000109648 ENSSSAG00000114639 ENSSSAG00000045853 ENSSSAG00000041199 adcy8 (ENSSSAG00000040213) #27 efr3a (ENSSSAG00000007630) #29 KCNQ3 (ENSSSAG00000007325) #32 dnaaf11 (ENSSSAG00000007262) #34 ENSSSAG00000096915 ankh (ENSSSAG00000007237) ENSSSAG00000116465 #22 ENSSSAG00000057836 #24 ENSSSAG00000005122 ENSSSAG00000004984 ENSSSAG00000116413 ENSSSAG00000004971 ENSSSAG00000095902 ENSSSAG00000083103 ENSSSAG00000060043 ENSSSAG00000121288 ENSSSAG00000090904 ENSSSAG00000098193 ENSSSAG00000088934 Huchen MODERN SPECIES 6609 mycb (ENSHHUG00000007006) #22 Northern pike MODERN SPECIES 2 rnf182 (ENSELUG00000017792) ENSELUG00000017811 ZNF622 (ENSELUG00000017844) ENSELUG00000017854 MYO10 (ENSELUG00000017944) ENSELUG00000029028 ENSELUG00000017962 adcy8 (ENSELUG00000018017) #27 ENSELUG00000031683 efr3a (ENSELUG00000018096) #29 OC90 (ENSELUG00000000736) #30 ENSELUG00000018140 KCNQ3 (ENSELUG00000018156) #32 dnaaf11 (ENSELUG00000018181) #34 ankhb (ENSELUG00000018238) mycb (ENSELUG00000018255) #22 fam49ba (ENSELUG00000018279) #24 asap1a (ENSELUG00000018358) #25 tmub1 (ENSELUG00000018373) klhl18 (ENSELUG00000018400) puf60a (ENSELUG00000018443) stk25b (ENSELUG00000001056) septin2 (ENSELUG00000018507) SOX14 (ENSELUG00000018524) CLDN18 (ENSELUG00000018538) selenof (ENSELUG00000018562) hs2st1a (ENSELUG00000018617) PKN2 (ENSELUG00000018727) gtf2b (ENSELUG00000018769) ENSELUG00000029638 ENSELUG00000034071 Osteoglossiformes ANCESTRAL SPECIES 77 ENSGT00390000012189.b ENSGT00940000155285.b.j.a.a #22 ENSGT00390000015159.b.c #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945.m ENSGT00400000022514 ENSGT00940000158259.b ENSGT00940000165754.a ENSGT00400000024709.a ENSGT00940000155594.c.b ENSGT00940000154025.a.f ENSGT00940000158533 ENSGT00390000000805.lb ENSGT00390000000626 ENSGT00940000157001 P. kingsleyae MODERN SPECIES 85 ENSPKIG00000017846 ENSPKIG00000017823 gprc5ba (ENSPKIG00000017809) RNF182 (ENSPKIG00000017797) zgc:165532 (ENSPKIG00000017770) ENSPKIG00000017739 SFRP4 (ENSPKIG00000017725) ENSPKIG00000017680 AMPH (ENSPKIG00000017616) vps41 (ENSPKIG00000017570) POU6F2 (ENSPKIG00000017536) otulina (ENSPKIG00000017520) ENSPKIG00000017476 ANKH (ENSPKIG00000017445) ENSPKIG00000017428 mycb (ENSPKIG00000017411) #22 ENSPKIG00000017320 #24 eef1a1l3 (ENSPKIG00000017246) ASAP1 (ENSPKIG00000017059) #25 NFX1 (ENSPKIG00000016899) ENSPKIG00000016855 ENSPKIG00000016807 ENSPKIG00000016787 SMARCD3 (ENSPKIG00000016701) CHPF2 (ENSPKIG00000016657) abcf2b (ENSPKIG00000016624) ENSPKIG00000016606 ENSPKIG00000016510 slc4a2b (ENSPKIG00000016349) ubtfl (ENSPKIG00000016248) ENSPKIG00000016231 Osteoglossocephalai ANCESTRAL SPECIES 58 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189 ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b #24 ENSGT00940000158547.d #25 ENSGT00390000014069.a ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 Clupeocephala ANCESTRAL SPECIES 150 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT01050000244890.a.b.b.d ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709 ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Otomorpha ANCESTRAL SPECIES 135 ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945.u.a ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT01050000244890.a.b.b.d ENSGT00940000155633.D ENSGT00530000063834.e.a ENSGT00530000063843.b ENSGT00940000153694.B ENSGT00940000158957 ENSGT00940000153725.a.b.b ENSGT00940000164537 Otophysi ANCESTRAL SPECIES 292 ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000005489 ENSGT00950000183138.a.a.b.u ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 Characiphysae ANCESTRAL SPECIES 200 ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00940000178028 ENSGT00390000005489 ENSGT00950000183138.a.a.b.u ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a Characiphysae_b ANCESTRAL SPECIES 225 ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00940000178028 ENSGT00950000183138.a.a.b.u ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a Characoidei ANCESTRAL SPECIES 341 ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 Red-bellied piranha MODERN SPECIES 152 cox4i1l (ENSPNAG00000009610) prkag2a (ENSPNAG00000009660) topbp1 (ENSPNAG00000009700) ENSPNAG00000001330 cdv3 (ENSPNAG00000009739) vps41 (ENSPNAG00000009802) POU6F2 (ENSPNAG00000009828) otulina (ENSPNAG00000009837) ENSPNAG00000009856 ankha (ENSPNAG00000009891) myca (ENSPNAG00000009900) #22 fam49bb (ENSPNAG00000001353) #24 eef1a1l3 (ENSPNAG00000009990) ASAP1 (ENSPNAG00000010153) #25 ENSPNAG00000010181 chmp4c (ENSPNAG00000010219) zfand1 (ENSPNAG00000010254) ENSPNAG00000001389 ENSPNAG00000010394 cbln10 (ENSPNAG00000010416) ENSPNAG00000010428 ENSPNAG00000010490 cbln10 (ENSPNAG00000010525) ENSPNAG00000010531 myripb (ENSPNAG00000010558) ackr4b (ENSPNAG00000010568) Mexicana tetra MODERN SPECIES 30 ENSAMXG00000043952 topbp1 (ENSAMXG00000002911) ENSAMXG00000041605 cdv3 (ENSAMXG00000002902) vps41 (ENSAMXG00000002875) POU6F2 (ENSAMXG00000002856) otulina (ENSAMXG00000002842) ENSAMXG00000002822 ankha (ENSAMXG00000002808) myca (ENSAMXG00000038957) #22 fam49bb (ENSAMXG00000002760) #24 eef1a1l3 (ENSAMXG00000002728) ASAP1 (ENSAMXG00000002685) #25 ENSAMXG00000033616 chmp4c (ENSAMXG00000036220) zfand1 (ENSAMXG00000029159) ENSAMXG00000040383 Electric eel MODERN SPECIES 77 ccl34b.1 (ENSEEEG00000007363) ENSEEEG00000007365 ENSEEEG00000007366 ek1 (ENSEEEG00000007368) hs6st1b (ENSEEEG00000007369) bcl2a (ENSEEEG00000007371) cox4i1l (ENSEEEG00000007374) prkag2a (ENSEEEG00000007375) topbp1 (ENSEEEG00000007392) ENSEEEG00000007395 cdv3 (ENSEEEG00000007396) vps41 (ENSEEEG00000007410) POU6F2 (ENSEEEG00000007579) ENSEEEG00000007581 ankha (ENSEEEG00000007582) myca (ENSEEEG00000007584) #22 fam49bb (ENSEEEG00000007589) #24 eef1a1l3 (ENSEEEG00000007828) ASAP1 (ENSEEEG00000007832) #25 ENSEEEG00000007835 chmp4c (ENSEEEG00000007837) zfand1 (ENSEEEG00000007840) ENSEEEG00000007844 ENSEEEG00000007845 myripb (ENSEEEG00000007847) acad11 (ENSEEEG00000007856) ackr4b (ENSEEEG00000008046) PXDC1 (ENSEEEG00000008047) prpf4bb (ENSEEEG00000008050) gli3 (ENSEEEG00000008052) ENSEEEG00000008055 Channel catfish MODERN SPECIES 15 ccl34b.4 (ENSIPUG00000004900) ccl34b.1 (ENSIPUG00000004880) ek1 (ENSIPUG00000004842) hs6st1b (ENSIPUG00000004826) bcl2 (ENSIPUG00000004823) cox4i1l (ENSIPUG00000004802) prkag2a (ENSIPUG00000004673) topbp1 (ENSIPUG00000004602) tmem108 (ENSIPUG00000004577) cdv3 (ENSIPUG00000004558) vps41 (ENSIPUG00000004370) pou6f2 (ENSIPUG00000004301) yae1d1 (ENSIPUG00000004288) ENSIPUG00000004235 ankhb (ENSIPUG00000004183) myca (ENSIPUG00000004157) #22 FAM49B (ENSIPUG00000004088) #24 eef1a1l3 (ENSIPUG00000004067) ENSIPUG00000004056 ENSIPUG00000004039 ENSIPUG00000004012 DNAJC13 (ENSIPUG00000003911) tmx3 (ENSIPUG00000003866) lztfl1 (ENSIPUG00000003801) ENSIPUG00000003784 CCR9 (ENSIPUG00000003778) gli3 (ENSIPUG00000003729) prpf4b (ENSIPUG00000003706) pxdc1b (ENSIPUG00000003673) ackr4b (ENSIPUG00000003662) ACAD11 (ENSIPUG00000003475) Cyprinoidei ANCESTRAL SPECIES 124 ENSGT00940000156220.k ENSGT00940000155230 ENSGT00510000049635 ENSGT00940000156098.a ENSGT01100000263537.b.a.a.b.b ENSGT00940000156398 ENSGT00940000156177 ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000005489 ENSGT00950000183138.a.a.b.u ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 156 ENSGT00940000155230.ac ENSGT00510000049635.a.b ENSGT00940000156098.a.n ENSGT01100000263537.b.a.a.b.b.f ENSGT00940000156398.g ENSGT00940000156177.a ENSGT00940000157001.h ENSGT00390000000626.d ENSGT00390000000805.jb ENSGT00390000000481.k ENSGT00940000156175.f ENSGT00960000187176 ENSGT00390000011176 ENSGT00390000009802.b.e.a ENSGT00390000012189.c.b.d ENSGT00940000155285.b.j.a.b.a #22 ENSGT00390000015159.b.a.a.a #24 ENSGT00940000165526.b ENSGT00940000158547.c.a #25 ENSGT00940000162556.B.a.b ENSGT00940000159257.d ENSGT00730000111180.k ENSGT00390000005489.e ENSGT00950000183138.a.a.b.u ENSGT01030000234667.a.a.a.b.a.d ENSGT00940000160993.e ENSGT00390000009209.o.a ENSGT00940000155562.l.b.a ENSGT00940000155925.c.b Cyprininae_a ANCESTRAL SPECIES 19 ENSGT00940000155230.`c ENSGT00510000049635.a.a.a ENSGT00940000156098.a.m ENSGT01100000263537.b.a.a.b.b.e ENSGT00940000156398.h ENSGT00940000156177.b ENSGT00940000157001.g ENSGT00390000000626.c ENSGT00390000000805.ib ENSGT00390000000481.l ENSGT00940000156175.f ENSGT00960000187176 ENSGT00940000156175.e.b ENSGT00390000009802.b.e.a ENSGT00390000012189.c.b.d ENSGT00940000155285.b.j.a.b.a #22 Golden-line barbel MODERN SPECIES 121 ENSSGRG00000054224 tgif1 (ENSSGRG00000054225) ENSSGRG00000054226 ENSSGRG00000054228 ENSSGRG00000054229 nphp3 (ENSSGRG00000054230) uba5 (ENSSGRG00000054231) topbp1 (ENSSGRG00000054234) ENSSGRG00000054307 cdv3 (ENSSGRG00000054308) vps41 (ENSSGRG00000054323) ENSSGRG00000054446 ENSSGRG00000054448 ENSSGRG00000054450 ankha (ENSSGRG00000054451) myca (ENSSGRG00000054500) #22 fam49bb (ENSSGRG00000054504) #24 Common carp reference MODERN SPECIES 40 ENSCCRG00000062682 tgif1 (ENSCCRG00000016249) ENSCCRG00000054055 ENSCCRG00000017814 ENSCCRG00000018230 nphp3 (ENSCCRG00000018255) uba5 (ENSCCRG00000061266) topbp1 (ENSCCRG00000048924) ENSCCRG00000028743 cdv3 (ENSCCRG00000065262) vps41 (ENSCCRG00000014865) ENSCCRG00000015358 ENSCCRG00000054025 ankha (ENSCCRG00000014560) ENSCCRG00000074550 myca (ENSCCRG00000053208) #22 ENSCCRG00000068607 fam49bb (ENSCCRG00000079298) #24 eef1a1l3 (ENSCCRG00000064386) ASAP1 (ENSCCRG00000076233) #25 ENSCCRG00000082022 zfand1 (ENSCCRG00000017191) ENSCCRG00000017187 myripb (ENSCCRG00000017174) ENSCCRG00000010016 acad11 (ENSCCRG00000069332) ackr4b (ENSCCRG00000073214) ENSCCRG00000075914 ENSCCRG00000067470 ENSCCRG00000024920 prpf4bb (ENSCCRG00000015006) Goldfish MODERN SPECIES 16 DLGAP1 (ENSCARG00000051592) tgif1 (ENSCARG00000052093) ENSCARG00000052116 ENSCARG00000052161 ENSCARG00000052518 nphp3 (ENSCARG00000052550) uba5 (ENSCARG00000052644) topbp1 (ENSCARG00000053303) ENSCARG00000053840 cdv3 (ENSCARG00000053848) vps41 (ENSCARG00000054045) POU6F2 (ENSCARG00000056161) otulina (ENSCARG00000056241) ENSCARG00000056263 ankha (ENSCARG00000056356) myc (ENSCARG00000056880) #22 ENSCARG00000056898 gli3 (ENSCARG00000056913) ENSCARG00000056931 ENSCARG00000056937 prpf4bb (ENSCARG00000056977) PXDC1 (ENSCARG00000057584) acad11 (ENSCARG00000057621) ackr4b (ENSCARG00000057837) myripb (ENSCARG00000057876) ENSCARG00000057916 ENSCARG00000057924 zfand1 (ENSCARG00000057943) chmp4c (ENSCARG00000057987) ENSCARG00000058011 ASAP1 (ENSCARG00000058303) #25 Cyprininae ANCESTRAL SPECIES 801 ENSGT00940000156175.e.a ENSGT00390000009802.b.e.b ENSGT00390000012189.c.b.c ENSGT00940000155285.b.j.a.b.b #22 ENSGT00390000015159.b.a.a.b #24 ENSGT00390000015159.b.a.b #24 ENSGT00940000165526.a ENSGT00940000158547.c.b #25 ENSGT00940000162556.B.a.a Goldfish MODERN SPECIES 43 ezh2 (ENSCARG00000069163) cul1b (ENSCARG00000069205) CNTNAP2 (ENSCARG00000069395) tpk1 (ENSCARG00000069712) sec61g (ENSCARG00000069727) zgc:112332 (ENSCARG00000069732) ENSCARG00000069744 relch (ENSCARG00000069781) CSPP1 (ENSCARG00000069942) ARFGEF1 (ENSCARG00000069998) CPA6 (ENSCARG00000070106) PREX2 (ENSCARG00000070132) otulina (ENSCARG00000070164) ENSCARG00000070163 ankha (ENSCARG00000070167) myca (ENSCARG00000070169) #22 fam49bb (ENSCARG00000070170) #24 ASAP1 (ENSCARG00000070188) #25 ENSCARG00000070203 ENSCARG00000070205 wdr37 (ENSCARG00000070215) idi1 (ENSCARG00000070221) slc35g2b (ENSCARG00000070223) NCK1 (ENSCARG00000070225) gyg1b (ENSCARG00000070229) sugct (ENSCARG00000070232) inhbaa (ENSCARG00000070235) ENSCARG00000070236 f13a1a.1 (ENSCARG00000070237) nrn1a (ENSCARG00000070240) fars2 (ENSCARG00000070244) Cyprininae_a ANCESTRAL SPECIES 57 ENSGT00940000160982.y ENSGT00940000156220.k.g ENSGT00940000155230.ac ENSGT00510000049635.a.b ENSGT00940000156098.a.n ENSGT01100000263537.b.a.a.b.b.f ENSGT00940000156398.g ENSGT00940000156177.a ENSGT00940000157001.h ENSGT00390000000626.d ENSGT00390000000805.jb ENSGT00390000000481.k ENSGT00940000156175.e.a ENSGT00390000009802.b.e.b ENSGT00390000012189.c.b.c ENSGT00940000155285.b.j.a.b.b #22 ENSGT00390000015159.b.a.a.b #24 ENSGT00390000015159.b.a.b #24 ENSGT00940000165526.a ENSGT00940000158547.c.b #25 Common carp reference MODERN SPECIES 14 ENSCCRG00000062075 ENSCCRG00000067450 ENSCCRG00000061488 tgif1 (ENSCCRG00000055917) ENSCCRG00000075612 ENSCCRG00000018279 nphp3 (ENSCCRG00000018284) uba5 (ENSCCRG00000048871) topbp1 (ENSCCRG00000081139) ENSCCRG00000001043 cdv3 (ENSCCRG00000032561) vps41 (ENSCCRG00000032583) ENSCCRG00000065988 ENSCCRG00000015018 ankha (ENSCCRG00000042363) myca (ENSCCRG00000042352) #22 fam49bb (ENSCCRG00000005112) #24 eef1a1l3 (ENSCCRG00000015970) ASAP1 (ENSCCRG00000027846) #25 ENSCCRG00000079554 ENSCCRG00000017196 chmp4c (ENSCCRG00000071920) ENSCCRG00000038392 ENSCCRG00000040058 ENSCCRG00000081099 ackr4b (ENSCCRG00000023808) ENSCCRG00000074896 ENSCCRG00000079991 prpf4bb (ENSCCRG00000005184) ENSCCRG00000071951 ENSCCRG00000080858 Golden-line barbel MODERN SPECIES 639 ENSSGRG00000031180 tgif1 (ENSSGRG00000031179) ENSSGRG00000031178 ENSSGRG00000031177 ENSSGRG00000031175 nphp3 (ENSSGRG00000031137) uba5 (ENSSGRG00000031038) cdv3 (ENSSGRG00000031030) vps41 (ENSSGRG00000030031) ENSSGRG00000030011 ankha (ENSSGRG00000029825) myca (ENSSGRG00000029817) #22 fam49bb (ENSSGRG00000028796) #24 ENSSGRG00000028756 ENSSGRG00000028755 ASAP1 (ENSSGRG00000027454) #25 Zebrafish MODERN SPECIES 16 cdv3 (ENSDARG00000023028) vps41 (ENSDARG00000063573) zgc:171977 (ENSDARG00000092885) zgc:152652 (ENSDARG00000095281) ENSDARG00000093216 zgc:171750 (ENSDARG00000078638) ENSDARG00000092924 zgc:173856 (ENSDARG00000045424) ENSDARG00000045423 POU6F2 (ENSDARG00000086362) ENSDARG00000073931 otulina (ENSDARG00000045422) ENSDARG00000095829 ankha (ENSDARG00000071724) ENSDARG00000098036 myca (ENSDARG00000045695) #22 fam49bb (ENSDARG00000045417) #24 ASAP1 (ENSDARG00000039729) #25 eef1a1l3 (ENSDARG00000071727) ENSDARG00000090548 chmp4c (ENSDARG00000007418) zfand1 (ENSDARG00000009178) ENSDARG00000071735 myripb (ENSDARG00000038814) ENSDARG00000094422 acad11 (ENSDARG00000045411) ackr4b (ENSDARG00000040133) PXDC1 (ENSDARG00000040309) prpf4bb (ENSDARG00000040310) gli3 (ENSDARG00000052131) tm9sf1 (ENSDARG00000022970) Clupeiformes ANCESTRAL SPECIES 592 ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 Denticle herring MODERN SPECIES 11 shha (ENSDCDG00000007917) ENSDCDG00000007907 ENSDCDG00000007894 en2a (ENSDCDG00000007875) insig1 (ENSDCDG00000007862) htr5ab (ENSDCDG00000007852) puf60b (ENSDCDG00000005495) topbp1 (ENSDCDG00000005062) ENSDCDG00000005027 cdv3 (ENSDCDG00000005023) vps41 (ENSDCDG00000003293) POU6F2 (ENSDCDG00000002873) otulina (ENSDCDG00000002866) ENSDCDG00000002865 ankha (ENSDCDG00000002800) myca (ENSDCDG00000002786) #22 fam49bb (ENSDCDG00000002657) #24 eef1a1l3 (ENSDCDG00000002637) ASAP1 (ENSDCDG00000001919) #25 ENSDCDG00000001839 NFX1 (ENSDCDG00000001611) smarcd3b (ENSDCDG00000001387) CHPF2 (ENSDCDG00000001373) abcf2b (ENSDCDG00000001365) PRKDC (ENSDCDG00000001097) garem (ENSDCDG00000001044) ncf2 (ENSDCDG00000000975) dph2 (ENSDCDG00000000956) zgc:165532 (ENSDCDG00000000950) rgs9bp (ENSDCDG00000000948) ENSDCDG00000000942 Atlantic herring MODERN SPECIES 8 ENSCHAG00000006418 ENSCHAG00000006383 ENSCHAG00000006371 insig1 (ENSCHAG00000006341) htr5ab (ENSCHAG00000006310) puf60b (ENSCHAG00000005982) topbp1 (ENSCHAG00000005054) ENSCHAG00000004998 cdv3 (ENSCHAG00000004983) vps41 (ENSCHAG00000004342) POU6F2 (ENSCHAG00000004172) otulina (ENSCHAG00000004148) ENSCHAG00000004091 ankha (ENSCHAG00000004010) B3GAT1 (ENSCHAG00000003898) myca (ENSCHAG00000003864) #22 ENSCHAG00000003841 fam49bb (ENSCHAG00000003694) #24 eef1a1l3 (ENSCHAG00000003659) ASAP1 (ENSCHAG00000002434) #25 ENSCHAG00000025844 ENSCHAG00000025840 PTCHD3 (ENSCHAG00000025838) ENSCHAG00000025833 ENSCHAG00000025830 ENSCHAG00000025829 ENSCHAG00000025828 ENSCHAG00000025826 LRRTM1 (ENSCHAG00000025823) ENSCHAG00000025821 NFX1 (ENSCHAG00000025569) Euteleosteomorpha ANCESTRAL SPECIES 31 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709 ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Acanthomorphata ANCESTRAL SPECIES 17 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b Euacanthomorphacea ANCESTRAL SPECIES 16 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b Percomorphaceae ANCESTRAL SPECIES 28 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b Tiger tail seahorse MODERN SPECIES 285 ENSHCOG00000001040 lypla1 (ENSHCOG00000001049) mrpl15 (ENSHCOG00000001055) sox32 (ENSHCOG00000001064) sox17 (ENSHCOG00000001067) ENSHCOG00000001074 ENSHCOG00000001078 vps41 (ENSHCOG00000001099) POU6F2 (ENSHCOG00000001117) ENSHCOG00000001124 ENSHCOG00000001133 ankha (ENSHCOG00000001143) myca (ENSHCOG00000001185) #22 fam49bb (ENSHCOG00000001203) #24 eef1a1l3 (ENSHCOG00000001215) ASAP1 (ENSHCOG00000001229) #25 NFX1 (ENSHCOG00000001235) ENSHCOG00000001239 smarcd3b (ENSHCOG00000001249) CHPF2 (ENSHCOG00000001258) abcf2a (ENSHCOG00000001268) ENSHCOG00000001277 ezh2 (ENSHCOG00000001287) Percomorphaceae_B ANCESTRAL SPECIES 20 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 Percomorphaceae_C ANCESTRAL SPECIES 21 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b Eupercaria ANCESTRAL SPECIES 20 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Tetraodontidae ANCESTRAL SPECIES 18 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b.b ENSGT00390000004989.a.b.a ENSGT00940000160430 ENSGT00940000155594.c.b Fugu MODERN SPECIES 1 FASTKD3 (ENSTRUG00000006808) OPRK1 (ENSTRUG00000007104) ENSTRUG00000007273 lypla1 (ENSTRUG00000007339) mrpl15 (ENSTRUG00000007522) sox32 (ENSTRUG00000007604) sox17 (ENSTRUG00000007618) ENSTRUG00000032813 ENSTRUG00000022738 ENSTRUG00000007762 vps41 (ENSTRUG00000007800) POU6F2 (ENSTRUG00000008239) otulina (ENSTRUG00000008377) ENSTRUG00000008441 ankha (ENSTRUG00000008542) myc (ENSTRUG00000008797) #22 eef1a1l3 (ENSTRUG00000009006) ASAP1 (ENSTRUG00000009127) #25 NFX1 (ENSTRUG00000009872) CHPF2 (ENSTRUG00000010232) abcf2a (ENSTRUG00000010308) ENSTRUG00000023734 ENSTRUG00000021158 ENSTRUG00000025521 ENSTRUG00000021475 ENSTRUG00000024352 ENSTRUG00000024686 ENSTRUG00000032484 nrbp2b (ENSTRUG00000004607) puf60b (ENSTRUG00000005420) scrib (ENSTRUG00000005856) Tetraodon MODERN SPECIES 21 MYOM1 (ENSTNIG00000017121) MYL12B (ENSTNIG00000017122) FASTKD3 (ENSTNIG00000017123) ENSTNIG00000017124 OPRK1 (ENSTNIG00000017125) RGS20 (ENSTNIG00000017126) lypla1 (ENSTNIG00000017127) sox32 (ENSTNIG00000017128) sox17 (ENSTNIG00000017129) ENSTNIG00000017130 ENSTNIG00000017131 vps41 (ENSTNIG00000017132) POU6F2 (ENSTNIG00000017133) OTULIN (ENSTNIG00000017134) ankha (ENSTNIG00000017135) myca (ENSTNIG00000017136) #22 fam49bb (ENSTNIG00000017137) #24 eef1a1l3 (ENSTNIG00000017138) ASAP1 (ENSTNIG00000017139) #25 ENSTNIG00000017140 smarcd3b (ENSTNIG00000017141) CHPF2 (ENSTNIG00000017142) abcf2a (ENSTNIG00000017143) ENSTNIG00000017144 slc4a2b (ENSTNIG00000017145) ENSTNIG00000017146 nrbp2b (ENSTNIG00000013676) puf60b (ENSTNIG00000013675) scrib (ENSTNIG00000013674) cdv3 (ENSTNIG00000013673) topbp1 (ENSTNIG00000013672) Eupecaria_A ANCESTRAL SPECIES 19 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Eupecaria_B ANCESTRAL SPECIES 19 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Eupecaria_C ANCESTRAL SPECIES 19 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 17 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a European seabass MODERN SPECIES 8 CHMP5 (ENSDLAG00005026401) ENSDLAG00005027177 RGS20 (ENSDLAG00005021819) LYPLA1 (ENSDLAG00005021821) mrpl15 (ENSDLAG00005021825) sox32 (ENSDLAG00005021835) Sox17 (ENSDLAG00005021840) ENSDLAG00005033061 ENSDLAG00005034380 vps41 (ENSDLAG00005027328) ENSDLAG00005022491 otulina (ENSDLAG00005026394) ENSDLAG00005022508 ANKH (ENSDLAG00005022519) ENSDLAG00005030484 myca (ENSDLAG00005022642) #22 fam49bb (ENSDLAG00005004275) #24 42SP50 (ENSDLAG00005004878) ASAP1 (ENSDLAG00005005012) #25 ENSDLAG00005008350 SMARCD3 (ENSDLAG00005008660) ENSDLAG00005030890 ABCF2 (ENSDLAG00005009120) ENSDLAG00005009346 slc4a2b (ENSDLAG00005009418) ENSDLAG00005032892 ENSDLAG00005033004 ENSDLAG00005002430 ENSDLAG00005015072 ENSDLAG00005028684 nrbp2b (ENSDLAG00005010649) Large yellow croaker MODERN SPECIES 494 chmp5b (ENSLCRG00005021831) OPRK1 (ENSLCRG00005021829) RGS20 (ENSLCRG00005021827) lypla1 (ENSLCRG00005021825) mrpl15 (ENSLCRG00005021824) sox32 (ENSLCRG00005021823) sox17 (ENSLCRG00005021821) ENSLCRG00005021820 ENSLCRG00005021819 vps41 (ENSLCRG00005021128) POU6F2 (ENSLCRG00005021122) ENSLCRG00005021120 otulina (ENSLCRG00005021119) ENSLCRG00005021118 ankha (ENSLCRG00005021116) myc (ENSLCRG00005021115) #22 fam49bb (ENSLCRG00005020950) #24 eef1a1l3 (ENSLCRG00005020945) ASAP1 (ENSLCRG00005020349) #25 NFX1 (ENSLCRG00005020336) smarcd3b (ENSLCRG00005020325) CHPF2 (ENSLCRG00005020323) abcf2a (ENSLCRG00005020309) ENSLCRG00005020304 slc4a2b (ENSLCRG00005017301) ENSLCRG00005017252 ENSLCRG00005017249 ENSLCRG00005017248 ENSLCRG00005017245 ENSLCRG00005017235 ENSLCRG00005017230 Gilthead seabream MODERN SPECIES 10 FASTKD3 (ENSSAUG00010002671) chmp5b (ENSSAUG00010002659) OPRK1 (ENSSAUG00010002649) ENSSAUG00010002637 lypla1 (ENSSAUG00010002627) mrpl15 (ENSSAUG00010002618) sox32 (ENSSAUG00010002613) sox17 (ENSSAUG00010025902) ENSSAUG00010025900 ENSSAUG00010025898 vps41 (ENSSAUG00010025600) POU6F2 (ENSSAUG00010025588) otulina (ENSSAUG00010025586) ENSSAUG00010025585 ankha (ENSSAUG00010025442) myca (ENSSAUG00010025436) #22 fam49bb (ENSSAUG00010025420) #24 eef1a1l3 (ENSSAUG00010025416) ASAP1 (ENSSAUG00010025209) #25 NFX1 (ENSSAUG00010025069) smarcd3b (ENSSAUG00010025032) CHPF2 (ENSSAUG00010025025) abcf2a (ENSSAUG00010024908) ENSSAUG00010024905 slc4a2b (ENSSAUG00010023272) ENSSAUG00010023243 ENSSAUG00010023242 ENSSAUG00010023241 ENSSAUG00010023240 ENSSAUG00010023239 nrbp2b (ENSSAUG00010023093) Perciformes ANCESTRAL SPECIES 21 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Cottioidei ANCESTRAL SPECIES 21 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Lumpfish MODERN SPECIES 12 FASTKD3 (ENSCLMG00005019217) chmp5b (ENSCLMG00005019196) OPRK1 (ENSCLMG00005019194) ENSCLMG00005019191 lypla1 (ENSCLMG00005019189) mrpl15 (ENSCLMG00005019186) sox32 (ENSCLMG00005019184) sox17 (ENSCLMG00005019182) ENSCLMG00005019181 ENSCLMG00005019179 vps41 (ENSCLMG00005018297) POU6F2 (ENSCLMG00005018281) otulina (ENSCLMG00005018280) ENSCLMG00005018278 ankha (ENSCLMG00005018274) myca (ENSCLMG00005018272) #22 fam49bb (ENSCLMG00005018082) #24 eef1a1l3 (ENSCLMG00005018075) ASAP1 (ENSCLMG00005014493) #25 NFX1 (ENSCLMG00005014385) smarcd3b (ENSCLMG00005014373) CHPF2 (ENSCLMG00005014371) abcf2a (ENSCLMG00005013875) ENSCLMG00005013869 slc4a2b (ENSCLMG00005013816) ENSCLMG00005013812 ENSCLMG00005013811 ENSCLMG00005013810 nrbp2b (ENSCLMG00005013807) puf60b (ENSCLMG00005013607) scrib (ENSCLMG00005009548) Stickleback MODERN SPECIES 20 chmp5b (ENSGACG00000004275) OPRK1 (ENSGACG00000004282) RGS20 (ENSGACG00000004297) lypla1 (ENSGACG00000004303) mrpl15 (ENSGACG00000004336) sox32 (ENSGACG00000004344) sox17 (ENSGACG00000004347) ENSGACG00000004356 ENSGACG00000004359 ENSGACG00000004363 vps41 (ENSGACG00000004365) POU6F2 (ENSGACG00000004422) otulina (ENSGACG00000004435) ENSGACG00000004436 ankha (ENSGACG00000004445) myca (ENSGACG00000004456) #22 fam49bb (ENSGACG00000004460) #24 eef1a1l3 (ENSGACG00000004505) ASAP1 (ENSGACG00000004538) #25 ENSGACG00000004557 NFX1 (ENSGACG00000004560) smarcd3b (ENSGACG00000004586) CHPF2 (ENSGACG00000004595) abcf2a (ENSGACG00000004604) ENSGACG00000004661 slc4a2b (ENSGACG00000004664) ENSGACG00000004690 ENSGACG00000004694 ENSGACG00000004701 ENSGACG00000004703 nrbp2b (ENSGACG00000004706) Perciformes_a ANCESTRAL SPECIES 22 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Pike perch MODERN SPECIES 94 FASTKD3 (ENSSLUG00000020391) chmp5b (ENSSLUG00000020380) OPRK1 (ENSSLUG00000020365) RGS20 (ENSSLUG00000020354) lypla1 (ENSSLUG00000020344) mrpl15 (ENSSLUG00000020332) sox32 (ENSSLUG00000020322) sox17 (ENSSLUG00000020318) ENSSLUG00000020306 ENSSLUG00000020296 vps41 (ENSSLUG00000018137) POU6F2 (ENSSLUG00000017996) otulina (ENSSLUG00000017991) ENSSLUG00000017986 ankha (ENSSLUG00000017973) myca (ENSSLUG00000017958) #22 fam49bb (ENSSLUG00000017424) #24 eef1a1l3 (ENSSLUG00000017352) ASAP1 (ENSSLUG00000013531) #25 NFX1 (ENSSLUG00000013237) smarcd3b (ENSSLUG00000013142) CHPF2 (ENSSLUG00000013109) abcf2a (ENSSLUG00000012962) ENSSLUG00000012897 slc4a2b (ENSSLUG00000009083) ENSSLUG00000008888 ENSSLUG00000008884 ENSSLUG00000008874 ENSSLUG00000008860 nrbp2b (ENSSLUG00000008558) puf60b (ENSSLUG00000007426) Channel bull blenny MODERN SPECIES 12 FASTKD3 (ENSCGOG00000017819) chmp5b (ENSCGOG00000017831) OPRK1 (ENSCGOG00000017923) RGS20 (ENSCGOG00000017925) lypla1 (ENSCGOG00000017926) mrpl15 (ENSCGOG00000017943) sox32 (ENSCGOG00000017944) sox17 (ENSCGOG00000017946) ENSCGOG00000017949 ENSCGOG00000017953 vps41 (ENSCGOG00000017994) POU6F2 (ENSCGOG00000018748) otulina (ENSCGOG00000018764) ENSCGOG00000018766 ankha (ENSCGOG00000018772) myca (ENSCGOG00000018778) #22 fam49bb (ENSCGOG00000018802) #24 eef1a1l3 (ENSCGOG00000019712) ASAP1 (ENSCGOG00000019982) #25 NFX1 (ENSCGOG00000021523) smarcd3b (ENSCGOG00000021683) CHPF2 (ENSCGOG00000021797) abcf2a (ENSCGOG00000021806) ENSCGOG00000022001 slc4a2b (ENSCGOG00000022017) ENSCGOG00000022177 ENSCGOG00000022178 ENSCGOG00000022180 nrbp2b (ENSCGOG00000022184) puf60b (ENSCGOG00000022205) scrib (ENSCGOG00000022394) Ballan wrasse MODERN SPECIES 514 POU6F2 (ENSLBEG00000021568) otulina (ENSLBEG00000021553) ENSLBEG00000021536 ankha (ENSLBEG00000021437) myca (ENSLBEG00000021421) #22 fam49bb (ENSLBEG00000021375) #24 eef1a1l3 (ENSLBEG00000021334) ASAP1 (ENSLBEG00000021158) #25 Percomorphaceae_D ANCESTRAL SPECIES 21 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b Carangaria ANCESTRAL SPECIES 21 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b Carangaria_A ANCESTRAL SPECIES 15 ENSGT00550000074817.u ENSGT00940000157341.h.b ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b Seriola ANCESTRAL SPECIES 27 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h.b ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b Greater amberjack MODERN SPECIES 217 ENSSDUG00000008469 chmp5b (ENSSDUG00000008690) OPRK1 (ENSSDUG00000008713) RGS20 (ENSSDUG00000008724) lypla1 (ENSSDUG00000008747) mrpl15 (ENSSDUG00000008800) sox32 (ENSSDUG00000008853) sox17 (ENSSDUG00000008856) ENSSDUG00000008866 ENSSDUG00000008878 vps41 (ENSSDUG00000008907) POU6F2 (ENSSDUG00000009014) otulina (ENSSDUG00000009032) ENSSDUG00000009039 ankha (ENSSDUG00000009056) myca (ENSSDUG00000009070) #22 fam49bb (ENSSDUG00000009087) #24 eef1a1l3 (ENSSDUG00000009163) ASAP1 (ENSSDUG00000009202) #25 NFX1 (ENSSDUG00000009395) smarcd3b (ENSSDUG00000009485) CHPF2 (ENSSDUG00000009673) abcf2a (ENSSDUG00000009698) ENSSDUG00000009751 slc4a2b (ENSSDUG00000009824) ENSSDUG00000009855 ENSSDUG00000009867 ENSSDUG00000009876 nrbp2b (ENSSDUG00000009888) puf60b (ENSSDUG00000009935) scrib (ENSSDUG00000010268) Yellowtail amberjack MODERN SPECIES 2786 FASTKD3 (ENSSLDG00000023450) chmp5b (ENSSLDG00000023455) OPRK1 (ENSSLDG00000023482) RGS20 (ENSSLDG00000023492) lypla1 (ENSSLDG00000023510) mrpl15 (ENSSLDG00000023535) sox32 (ENSSLDG00000023548) sox17 (ENSSLDG00000023554) ENSSLDG00000023564 ENSSLDG00000023584 vps41 (ENSSLDG00000023609) POU6F2 (ENSSLDG00000023665) otulina (ENSSLDG00000023685) ENSSLDG00000023688 ankha (ENSSLDG00000023694) myca (ENSSLDG00000023709) #22 fam49bb (ENSSLDG00000023740) #24 eef1a1l3 (ENSSLDG00000023761) ASAP1 (ENSSLDG00000023775) #25 ENSSLDG00000023812 NFX1 (ENSSLDG00000023817) smarcd3b (ENSSLDG00000023831) CHPF2 (ENSSLDG00000023839) abcf2a (ENSSLDG00000023850) ENSSLDG00000023874 slc4a2b (ENSSLDG00000023917) ENSSLDG00000023951 ENSSLDG00000023956 ENSSLDG00000023962 nrbp2b (ENSSLDG00000023974) puf60b (ENSSLDG00000024011) Barramundi perch MODERN SPECIES 254 chmp5b (ENSLCAG00010006227) OPRK1 (ENSLCAG00010006238) RGS20 (ENSLCAG00010006242) lypla1 (ENSLCAG00010006247) mrpl15 (ENSLCAG00010006256) sox32 (ENSLCAG00010006265) sox17 (ENSLCAG00010006270) ENSLCAG00010006276 ENSLCAG00010006279 ENSLCAG00010006285 vps41 (ENSLCAG00010006448) POU6F2 (ENSLCAG00010006885) ENSLCAG00010006898 ENSLCAG00010006901 ankha (ENSLCAG00010006933) myca (ENSLCAG00010007234) #22 fam49bb (ENSLCAG00010007263) #24 eef1a1l3 (ENSLCAG00010007296) ASAP1 (ENSLCAG00010007579) #25 NFX1 (ENSLCAG00010008597) smarcd3b (ENSLCAG00010008638) CHPF2 (ENSLCAG00010008727) abcf2a (ENSLCAG00010008766) ENSLCAG00010008900 Pleuronectoidei ANCESTRAL SPECIES 12 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Turbot MODERN SPECIES 9 ENSSMAG00000017809 ENSSMAG00000017822 ENSSMAG00000017849 RGS20 (ENSSMAG00000028766) lypla1 (ENSSMAG00000017866) mrpl15 (ENSSMAG00000017891) sox32 (ENSSMAG00000017912) sox17 (ENSSMAG00000017923) ENSSMAG00000017932 ENSSMAG00000036552 vps41 (ENSSMAG00000017977) ENSSMAG00000018083 ENSSMAG00000018096 ENSSMAG00000018117 ENSSMAG00000018127 myca (ENSSMAG00000018158) #22 fam49bb (ENSSMAG00000016168) #24 eef1a1l3 (ENSSMAG00000016143) ASAP1 (ENSSMAG00000016017) #25 ENSSMAG00000015963 SMARCD3 (ENSSMAG00000015904) ENSSMAG00000015882 ABCF2 (ENSSMAG00000015810) ENSSMAG00000015765 ENSSMAG00000015744 Tongue sole MODERN SPECIES 13 ENSCSEG00000000233 ENSCSEG00000000219 ENSCSEG00000000217 ggh (ENSCSEG00000000213) ENSCSEG00000000211 lypla1 (ENSCSEG00000019983) mrpl15 (ENSCSEG00000019973) sox32 (ENSCSEG00000019963) ENSCSEG00000019960 ENSCSEG00000019945 vps41 (ENSCSEG00000019919) POU6F2 (ENSCSEG00000019909) otulina (ENSCSEG00000019902) ENSCSEG00000019897 ankha (ENSCSEG00000019891) myca (ENSCSEG00000019889) #22 puf60b (ENSCSEG00000019887) nrbp2b (ENSCSEG00000019882) ENSCSEG00000019879 ENSCSEG00000019877 slc4a2b (ENSCSEG00000019871) ENSCSEG00000019865 abcf2a (ENSCSEG00000019855) CHPF2 (ENSCSEG00000019853) smarcd3b (ENSCSEG00000019844) NFX1 (ENSCSEG00000019832) ENSCSEG00000019827 ASAP1 (ENSCSEG00000019814) #25 eef1a1l3 (ENSCSEG00000019807) fam49bb (ENSCSEG00000019799) #24 scrib (ENSCSEG00000019685) Anabantaria ANCESTRAL SPECIES 22 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Zig-zag eel MODERN SPECIES 12 ENSMAMG00000005694 ENSMAMG00000005707 ENSMAMG00000028230 ENSMAMG00000005750 lypla1 (ENSMAMG00000009399) ENSMAMG00000009468 mrpl15 (ENSMAMG00000009482) sox32 (ENSMAMG00000009505) sox17 (ENSMAMG00000009528) ENSMAMG00000028264 vps41 (ENSMAMG00000009615) ENSMAMG00000009762 ENSMAMG00000026164 ENSMAMG00000009799 ankha (ENSMAMG00000009820) myca (ENSMAMG00000009873) #22 fam49bb (ENSMAMG00000009891) #24 eef1a1l3 (ENSMAMG00000009907) ASAP1 (ENSMAMG00000009940) #25 ENSMAMG00000010139 SMARCD3 (ENSMAMG00000010157) ENSMAMG00000026737 ABCF2 (ENSMAMG00000010198) ENSMAMG00000010229 slc4a2b (ENSMAMG00000010293) si:ch1073-406l10.2 (ENSMAMG00000027037) ENSMAMG00000025596 ENSMAMG00000028109 ENSMAMG00000026698 ENSMAMG00000027119 nrbp2b (ENSMAMG00000028463) Anabantoidei ANCESTRAL SPECIES 20 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Climbing perch MODERN SPECIES 11 ENSATEG00000003307 ENSATEG00000003315 ENSATEG00000002927 RGS20 (ENSATEG00000002862) lypla1 (ENSATEG00000002817) mrpl15 (ENSATEG00000002782) sox32 (ENSATEG00000002737) sox17 (ENSATEG00000002736) ENSATEG00000030084 ENSATEG00000002677 vps41 (ENSATEG00000002605) ENSATEG00000002547 otulina (ENSATEG00000002497) ENSATEG00000002491 ankha (ENSATEG00000026272) myca (ENSATEG00000002279) #22 fam49bb (ENSATEG00000002221) #24 ASAP1 (ENSATEG00000002089) #25 ENSATEG00000002080 SMARCD3 (ENSATEG00000002061) ENSATEG00000002039 ABCF2 (ENSATEG00000001990) ENSATEG00000001889 slc4a2b (ENSATEG00000001881) ENSATEG00000027615 ENSATEG00000001869 ENSATEG00000001831 ENSATEG00000027507 ENSATEG00000001798 nrbp2b (ENSATEG00000001781) ENSATEG00000001730 Siamese fighting fish MODERN SPECIES 15 ENSBSLG00000007775 ENSBSLG00000007833 RGS20 (ENSBSLG00000007869) lypla1 (ENSBSLG00000007880) mrpl15 (ENSBSLG00000007948) sox32 (ENSBSLG00000007961) sox17 (ENSBSLG00000007974) ENSBSLG00000007985 ENSBSLG00000007995 vps41 (ENSBSLG00000008119) POU6F2 (ENSBSLG00000010482) otulina (ENSBSLG00000010498) ENSBSLG00000010504 ENSBSLG00000010513 ankha (ENSBSLG00000010518) myca (ENSBSLG00000010568) #22 fam49bb (ENSBSLG00000010686) #24 eef1a1l3 (ENSBSLG00000010889) ASAP1 (ENSBSLG00000010963) #25 NFX1 (ENSBSLG00000012452) smarcd3b (ENSBSLG00000012640) CHPF2 (ENSBSLG00000013088) abcf2a (ENSBSLG00000013379) ENSBSLG00000014389 slc4a2b (ENSBSLG00000014467) ENSBSLG00000015066 ENSBSLG00000015068 ENSBSLG00000015073 ENSBSLG00000015202 ENSBSLG00000015281 nrbp2b (ENSBSLG00000015382) Ovalentaria ANCESTRAL SPECIES 21 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 Atherinomorphae ANCESTRAL SPECIES 19 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 Oryzias ANCESTRAL SPECIES 18 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 Oryzias_b ANCESTRAL SPECIES 16 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT01000000221249 ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Javanese ricefish MODERN SPECIES 12 MYL12B (ENSOJAG00000012155) FASTKD3 (ENSOJAG00000012148) chmp5b (ENSOJAG00000012117) ENSOJAG00000012093 RGS20 (ENSOJAG00000012088) lypla1 (ENSOJAG00000012074) mrpl15 (ENSOJAG00000012044) sox32 (ENSOJAG00000012009) sox17 (ENSOJAG00000011994) ENSOJAG00000011966 vps41 (ENSOJAG00000011510) POU6F2 (ENSOJAG00000011465) otulina (ENSOJAG00000011461) ENSOJAG00000011452 ankha (ENSOJAG00000011407) myca (ENSOJAG00000011322) #22 ENSOJAG00000011295 fam49bb (ENSOJAG00000011101) #24 eef1a1l3 (ENSOJAG00000011062) ASAP1 (ENSOJAG00000010440) #25 NFX1 (ENSOJAG00000010141) smarcd3b (ENSOJAG00000009827) CHPF2 (ENSOJAG00000009760) abcf2a (ENSOJAG00000009751) ENSOJAG00000009694 ENSOJAG00000007873 ENSOJAG00000007863 ENSOJAG00000007822 nrbp2b (ENSOJAG00000007683) puf60b (ENSOJAG00000007188) ENSOJAG00000006995 Indian medaka MODERN SPECIES 14 chmp5b (ENSOMEG00000002103) FASTKD3 (ENSOMEG00000002114) OPRK1 (ENSOMEG00000002087) RGS20 (ENSOMEG00000002080) lypla1 (ENSOMEG00000002069) mrpl15 (ENSOMEG00000002056) sox32 (ENSOMEG00000002046) sox17 (ENSOMEG00000002030) ENSOMEG00000002024 ENSOMEG00000002012 vps41 (ENSOMEG00000001986) POU6F2 (ENSOMEG00000001949) otulina (ENSOMEG00000000019) ENSOMEG00000000018 ankha (ENSOMEG00000001910) myca (ENSOMEG00000001897) #22 ENSOMEG00000001890 fam49bb (ENSOMEG00000001881) #24 eef1a1l3 (ENSOMEG00000001868) ASAP1 (ENSOMEG00000001852) #25 ENSOMEG00000001829 ENSOMEG00000001822 NFX1 (ENSOMEG00000001814) ENSOMEG00000001796 smarcd3b (ENSOMEG00000001784) CHPF2 (ENSOMEG00000001763) abcf2a (ENSOMEG00000001752) ENSOMEG00000001734 slc4a2b (ENSOMEG00000001716) ENSOMEG00000001690 ENSOMEG00000001688 Oryzias_a ANCESTRAL SPECIES 16 ENSGT01030000234607.A.a.a.a.c ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 Japanese Medaka HdrR MODERN SPECIES 12 FASTKD3 (ENSORLG00000011410) ENSORLG00000024140 lypla1 (ENSORLG00000011504) RGS20 (ENSORLG00000011462) mrpl15 (ENSORLG00000011523) sox32 (ENSORLG00000011529) sox17 (ENSORLG00000011542) ENSORLG00000022333 ENSORLG00000030502 vps41 (ENSORLG00000011643) POU6F2 (ENSORLG00000011666) ENSORLG00000011672 otulina (ENSORLG00000024228) ENSORLG00000011689 ankha (ENSORLG00000011729) myca (ENSORLG00000025592) #22 fam49bb (ENSORLG00000026369) #24 si:dkey-37o8.1 (ENSORLG00000019066) ASAP1 (ENSORLG00000029861) #25 ENSORLG00000027942 NFX1 (ENSORLG00000026662) smarcd3b (ENSORLG00000011768) CHPF2 (ENSORLG00000011783) abcf2a (ENSORLG00000011822) ENSORLG00000027505 slc4a2b (ENSORLG00000012164) ENSORLG00000029077 ENSORLG00000012186 nrbp2b (ENSORLG00000012200) puf60b (ENSORLG00000012279) ENSORLG00000012302 Chinese medaka MODERN SPECIES 71 ENSOSIG00000015113 FASTKD3 (ENSOSIG00000015115) OPRK1 (ENSOSIG00000015116) lypla1 (ENSOSIG00000015121) RGS20 (ENSOSIG00000015124) mrpl15 (ENSOSIG00000015126) sox32 (ENSOSIG00000015127) sox17 (ENSOSIG00000015131) ENSOSIG00000015132 ENSOSIG00000015134 ENSOSIG00000015142 POU6F2 (ENSOSIG00000016038) otulina (ENSOSIG00000016039) OTULIN (ENSOSIG00000016040) ankha (ENSOSIG00000016043) myca (ENSOSIG00000016076) #22 fam49bb (ENSOSIG00000016086) #24 ASAP1 (ENSOSIG00000016540) #25 NFX1 (ENSOSIG00000020368) smarcd3b (ENSOSIG00000020499) CHPF2 (ENSOSIG00000020619) slc4a2b (ENSOSIG00000020668) ENSOSIG00000021264 ENSOSIG00000021265 ENSOSIG00000021266 nrbp2b (ENSOSIG00000021289) ENSOSIG00000021677 ENSOSIG00000021936 topbp1 (ENSOSIG00000021984) lztfl1 (ENSOSIG00000022171) CCR9 (ENSOSIG00000022174) Cyprinodontiformes ANCESTRAL SPECIES 20 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 Cyprinodontoidei ANCESTRAL SPECIES 27 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b.y ENSGT00940000154025.a Poeciliinae ANCESTRAL SPECIES 20 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a.d ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b.y ENSGT00940000154025.a ENSGT00940000155594.c.b Poecilia ANCESTRAL SPECIES 17 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a.d ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b.y ENSGT00940000154025.a ENSGT00940000155594.c.b NAME_6 ANCESTRAL SPECIES 169 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a.d ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b.y.a Amazon molly DUPLICATION Amazon molly MODERN SPECIES 486 FASTKD3 (ENSPFOG00000014081) chmp5b (ENSPFOG00000014053) OPRK1 (ENSPFOG00000014033) RGS20 (ENSPFOG00000013996) lypla1 (ENSPFOG00000013928) mrpl15 (ENSPFOG00000013894) sox32 (ENSPFOG00000013880) sox17 (ENSPFOG00000013867) ENSPFOG00000013859 ENSPFOG00000013839 vps41 (ENSPFOG00000013663) POU6F2 (ENSPFOG00000013600) otulina (ENSPFOG00000013581) OTULIN (ENSPFOG00000013533) ankha (ENSPFOG00000013437) myca (ENSPFOG00000013425) #22 myca (ENSPFOG00000013399) #22 fam49bb (ENSPFOG00000013240) #24 eef1a1l3 (ENSPFOG00000013173) ASAP1 (ENSPFOG00000012683) #25 NFX1 (ENSPFOG00000012547) smarcd3b (ENSPFOG00000012463) CHPF2 (ENSPFOG00000012439) abcf2a (ENSPFOG00000012277) ENSPFOG00000012241 ENSPFOG00000022070 slc4a2b (ENSPFOG00000012046) ENSPFOG00000012039 ENSPFOG00000012027 ENSPFOG00000012017 ENSPFOG00000011998 Amazon molly MODERN SPECIES 486 chmp5b (ENSPFOG00000014053) OPRK1 (ENSPFOG00000014033) RGS20 (ENSPFOG00000013996) lypla1 (ENSPFOG00000013928) mrpl15 (ENSPFOG00000013894) sox32 (ENSPFOG00000013880) sox17 (ENSPFOG00000013867) ENSPFOG00000013859 ENSPFOG00000013839 vps41 (ENSPFOG00000013663) POU6F2 (ENSPFOG00000013600) otulina (ENSPFOG00000013581) OTULIN (ENSPFOG00000013533) ankha (ENSPFOG00000013437) myca (ENSPFOG00000013425) #22 myca (ENSPFOG00000013399) #22 fam49bb (ENSPFOG00000013240) #24 eef1a1l3 (ENSPFOG00000013173) ASAP1 (ENSPFOG00000012683) #25 NFX1 (ENSPFOG00000012547) smarcd3b (ENSPFOG00000012463) CHPF2 (ENSPFOG00000012439) abcf2a (ENSPFOG00000012277) ENSPFOG00000012241 ENSPFOG00000022070 slc4a2b (ENSPFOG00000012046) ENSPFOG00000012039 ENSPFOG00000012027 ENSPFOG00000012017 ENSPFOG00000011998 ENSPFOG00000022036 Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 127 FASTKD3 (ENSPLAG00000011844) chmp5b (ENSPLAG00000011864) ENSPLAG00000011873 ENSPLAG00000011883 lypla1 (ENSPLAG00000011923) mrpl15 (ENSPLAG00000011935) sox32 (ENSPLAG00000011957) sox17 (ENSPLAG00000011966) ENSPLAG00000011975 ENSPLAG00000011985 vps41 (ENSPLAG00000012077) POU6F2 (ENSPLAG00000012106) otulina (ENSPLAG00000012121) ENSPLAG00000012126 ankha (ENSPLAG00000012155) myca (ENSPLAG00000012165) #22 Sailfin molly MODERN SPECIES 1403 myca (ENSPLAG00000009047) #22 fam49bb (ENSPLAG00000009073) #24 Guppy MODERN SPECIES 451 FASTKD3 (ENSPREG00000006765) chmp5b (ENSPREG00000006727) ENSPREG00000006708 RGS20 (ENSPREG00000006695) lypla1 (ENSPREG00000006672) mrpl15 (ENSPREG00000006654) sox32 (ENSPREG00000006621) ENSPREG00000006602 ENSPREG00000006579 vps41 (ENSPREG00000006515) POU6F2 (ENSPREG00000006479) otulina (ENSPREG00000006464) OTULIN (ENSPREG00000006444) ankha (ENSPREG00000006429) ENSPREG00000006407 myca (ENSPREG00000006368) #22 fam49bb (ENSPREG00000006320) #24 eef1a1l3 (ENSPREG00000006280) ASAP1 (ENSPREG00000006220) #25 NFX1 (ENSPREG00000006186) smarcd3b (ENSPREG00000006165) CHPF2 (ENSPREG00000006154) abcf2a (ENSPREG00000006098) ENSPREG00000006028 slc4a2b (ENSPREG00000005968) ENSPREG00000005941 ENSPREG00000005904 ENSPREG00000005857 ENSPREG00000005844 ENSPREG00000005787 scrib (ENSPREG00000005702) Platyfish MODERN SPECIES 13 FASTKD3 (ENSXMAG00000002108) chmp5b (ENSXMAG00000002110) OPRK1 (ENSXMAG00000027112) RGS20 (ENSXMAG00000002100) lypla1 (ENSXMAG00000002093) mrpl15 (ENSXMAG00000002087) sox32 (ENSXMAG00000002086) sox17 (ENSXMAG00000002084) ENSXMAG00000026548 ENSXMAG00000020052 vps41 (ENSXMAG00000002050) POU6F2 (ENSXMAG00000024135) otulina (ENSXMAG00000021215) ENSXMAG00000002031 ankha (ENSXMAG00000002027) myca (ENSXMAG00000002025) #22 fam49bb (ENSXMAG00000026161) #24 eef1a1l3 (ENSXMAG00000001998) ASAP1 (ENSXMAG00000001975) #25 NFX1 (ENSXMAG00000001963) smarcd3b (ENSXMAG00000022630) CHPF2 (ENSXMAG00000001943) abcf2a (ENSXMAG00000001927) ENSXMAG00000001926 slc4a2b (ENSXMAG00000001894) ENSXMAG00000001890 ENSXMAG00000015202 ENSXMAG00000001889 scrib (ENSXMAG00000001864) puf60b (ENSXMAG00000001862) nrbp2b (ENSXMAG00000001840) NAME_4 ANCESTRAL SPECIES 38 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Mummichog MODERN SPECIES 528 ENSFHEG00000011787 FASTKD3 (ENSFHEG00000011778) chmp5b (ENSFHEG00000011771) ENSFHEG00000011736 RGS20 (ENSFHEG00000011720) lypla1 (ENSFHEG00000011700) mrpl15 (ENSFHEG00000011673) sox32 (ENSFHEG00000011659) sox17 (ENSFHEG00000011615) ENSFHEG00000011613 ENSFHEG00000011593 vps41 (ENSFHEG00000011570) POU6F2 (ENSFHEG00000011516) otulina (ENSFHEG00000011475) ankha (ENSFHEG00000011444) myca (ENSFHEG00000011396) #22 Sheepshead minnow MODERN SPECIES 235 FASTKD3 (ENSCVAG00000009391) chmp5b (ENSCVAG00000009424) OPRK1 (ENSCVAG00000009440) ENSCVAG00000009454 lypla1 (ENSCVAG00000009504) mrpl15 (ENSCVAG00000009515) sox32 (ENSCVAG00000009537) sox17 (ENSCVAG00000009541) ENSCVAG00000009546 ENSCVAG00000009558 vps41 (ENSCVAG00000009630) POU6F2 (ENSCVAG00000009675) otulina (ENSCVAG00000009707) ENSCVAG00000009719 ankha (ENSCVAG00000009767) myca (ENSCVAG00000009784) #22 fam49bb (ENSCVAG00000009820) #24 eef1a1l3 (ENSCVAG00000009828) ASAP1 (ENSCVAG00000010016) #25 NFX1 (ENSCVAG00000010039) smarcd3b (ENSCVAG00000010125) CHPF2 (ENSCVAG00000010130) abcf2a (ENSCVAG00000010164) ENSCVAG00000010217 Aplocheiloidei ANCESTRAL SPECIES 18 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Turquoise killifish MODERN SPECIES 1617 OPRK1 (ENSNFUG00015006448) RGS20 (ENSNFUG00015006452) lypla1 (ENSNFUG00015006459) sox32 (ENSNFUG00015006467) SOX17 (ENSNFUG00015006469) ENSNFUG00015006471 ENSNFUG00015006473 ENSNFUG00015006481 VPS41 (ENSNFUG00015006492) ENSNFUG00015006516 ENSNFUG00015006521 POU6F2 (ENSNFUG00015006526) otulina (ENSNFUG00015006533) FAM105BA (ENSNFUG00015006535) ankha (ENSNFUG00015006543) myca (ENSNFUG00015006602) #22 eef1a1l3 (ENSNFUG00015006608) fam49bb (ENSNFUG00015006616) #24 ASAP1 (ENSNFUG00015006679) #25 NFX1 (ENSNFUG00015007270) smarcd3b (ENSNFUG00015007631) CHPF2 (ENSNFUG00015007700) abcf2a (ENSNFUG00015007711) CU694221.1 (ENSNFUG00015007762) ENSNFUG00015007768 SLC4A2B (ENSNFUG00015007822) ENSNFUG00015008423 OLA.2605 (ENSNFUG00015008426) Nfu_g_1_006955 (ENSNFUG00015008429) ENSNFUG00015008431 Nfu_g_1_006903 (ENSNFUG00015008436) Mangrove rivulus MODERN SPECIES 7 FASTKD3 (ENSKMAG00000015153) chmp5b (ENSKMAG00000015178) OPRK1 (ENSKMAG00000015223) RGS20 (ENSKMAG00000015246) lypla1 (ENSKMAG00000015266) mrpl15 (ENSKMAG00000015306) sox32 (ENSKMAG00000015350) sox17 (ENSKMAG00000015407) ENSKMAG00000015419 ENSKMAG00000015441 vps41 (ENSKMAG00000015509) POU6F2 (ENSKMAG00000015680) otulina (ENSKMAG00000015748) ENSKMAG00000015762 ankha (ENSKMAG00000015802) myca (ENSKMAG00000015852) #22 fam49bb (ENSKMAG00000015874) #24 eef1a1l3 (ENSKMAG00000015910) ASAP1 (ENSKMAG00000016018) #25 NFX1 (ENSKMAG00000016306) smarcd3b (ENSKMAG00000016357) CHPF2 (ENSKMAG00000016424) abcf2a (ENSKMAG00000016453) ENSKMAG00000016498 slc4a2b (ENSKMAG00000016571) ENSKMAG00000016662 ENSKMAG00000016670 ENSKMAG00000016686 nrbp2b (ENSKMAG00000016702) ENSKMAG00000016728 puf60b (ENSKMAG00000016745) Ovalentaria_B ANCESTRAL SPECIES 20 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b Pomacentridae ANCESTRAL SPECIES 11 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 151 myca (ENSSPAG00000022470) #22 Bicolor damselfish MODERN SPECIES 149 myca (ENSSPAG00000022436) #22 Pomacentridae_A ANCESTRAL SPECIES 8 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000177207 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a Amphiprion ANCESTRAL SPECIES 7 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000177207 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430.lb ENSGT00940000155594.c.b ENSGT00940000154025.a Clown anemonefish MODERN SPECIES 1034 nrbp2b (ENSAOCG00000013301) ENSAOCG00000013320 vps41 (ENSAOCG00000000842) POU6F2 (ENSAOCG00000013500) otulina (ENSAOCG00000013507) ENSAOCG00000013528 ankha (ENSAOCG00000013571) myca (ENSAOCG00000013584) #22 Orange clownfish MODERN SPECIES 14 chmp5b (ENSAPEG00000013601) OPRK1 (ENSAPEG00000013233) RGS20 (ENSAPEG00000013180) lypla1 (ENSAPEG00000013123) mrpl15 (ENSAPEG00000013090) sox32 (ENSAPEG00000013081) ENSAPEG00000013076 sox17 (ENSAPEG00000013070) ENSAPEG00000013051 ENSAPEG00000013040 vps41 (ENSAPEG00000012869) POU6F2 (ENSAPEG00000012836) otulina (ENSAPEG00000012827) ENSAPEG00000012819 ankha (ENSAPEG00000012783) myca (ENSAPEG00000012769) #22 fam49bb (ENSAPEG00000012710) #24 eef1a1l3 (ENSAPEG00000012670) ASAP1 (ENSAPEG00000012491) #25 NFX1 (ENSAPEG00000012401) smarcd3b (ENSAPEG00000012305) CHPF2 (ENSAPEG00000012271) abcf2a (ENSAPEG00000012199) ENSAPEG00000012112 slc4a2b (ENSAPEG00000012059) ENSAPEG00000012045 ENSAPEG00000012038 ENSAPEG00000012005 nrbp2b (ENSAPEG00000011981) puf60b (ENSAPEG00000011923) scrib (ENSAPEG00000011753) Spiny chromis MODERN SPECIES 251 otulina (ENSAPOG00000016279) ENSAPOG00000016293 ankha (ENSAPOG00000016355) myca (ENSAPOG00000016366) #22 fam49bb (ENSAPOG00000016390) #24 ENSAPOG00000016407 eef1a1l3 (ENSAPOG00000016459) ASAP1 (ENSAPOG00000016620) #25 NFX1 (ENSAPOG00000016671) smarcd3b (ENSAPOG00000016729) CHPF2 (ENSAPOG00000016756) abcf2a (ENSAPOG00000016835) ENSAPOG00000016920 slc4a2b (ENSAPOG00000017003) ENSAPOG00000017011 ENSAPOG00000017025 ENSAPOG00000017036 Cichlidae ANCESTRAL SPECIES 18 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b Midas cichlid MODERN SPECIES 147 myca (ENSACIG00000020955) #22 fam49bb (ENSACIG00000020963) #24 eef1a1l3 (ENSACIG00000020985) ASAP1 (ENSACIG00000021001) #25 ENSACIG00000021048 NFX1 (ENSACIG00000021055) smarcd3b (ENSACIG00000021100) CHPF2 (ENSACIG00000021194) abcf2a (ENSACIG00000021213) ENSACIG00000021237 slc4a2b (ENSACIG00000021326) ENSACIG00000021582 ENSACIG00000021596 ENSACIG00000021606 ENSACIG00000021610 ENSACIG00000021619 Pseudocrenilabrinae ANCESTRAL SPECIES 20 ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j.a.b ENSGT00400000024709.j.b ENSGT00390000004989.a.b.bb ENSGT00390000004989.a.b.ab.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 19 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j.a.b ENSGT00400000024709.j.b ENSGT00400000024709.j.a.a ENSGT00390000004989.a.b.bb Haplochromini ANCESTRAL SPECIES 21 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j.a.b ENSGT00400000024709.j.b ENSGT00400000024709.j.a.a ENSGT00390000004989.a.b.bb Burton s mouthbrooder MODERN SPECIES 319 FASTKD3 (ENSHBUG00000016113) chmp5b (ENSHBUG00000016103) OPRK1 (ENSHBUG00000016074) RGS20 (ENSHBUG00000016063) lypla1 (ENSHBUG00000016035) mrpl15 (ENSHBUG00000015988) sox32 (ENSHBUG00000015975) sox17 (ENSHBUG00000015949) ENSHBUG00000015946 ENSHBUG00000015937 vps41 (ENSHBUG00000015897) POU6F2 (ENSHBUG00000015845) otulina (ENSHBUG00000015779) ENSHBUG00000015748 ankha (ENSHBUG00000015711) myca (ENSHBUG00000015689) #22 fam49bb (ENSHBUG00000015548) #24 eef1a1l3 (ENSHBUG00000015515) ASAP1 (ENSHBUG00000015490) #25 ENSHBUG00000015410 NFX1 (ENSHBUG00000015403) smarcd3b (ENSHBUG00000015370) CHPF2 (ENSHBUG00000015335) abcf2a (ENSHBUG00000015296) ENSHBUG00000015252 slc4a2b (ENSHBUG00000015231) ENSHBUG00000015172 ENSHBUG00000015169 ENSHBUG00000015164 ENSHBUG00000015152 ENSHBUG00000015149 Haplochromini_A ANCESTRAL SPECIES 21 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00940000182574 ENSGT00400000024709.i ENSGT00400000024709.j.a.b ENSGT00400000024709.j.b ENSGT00400000024709.j.a.a P. nyererei MODERN SPECIES 382 FASTKD3 (ENSPNYG00000001552) chmp5b (ENSPNYG00000001561) ENSPNYG00000001599 RGS20 (ENSPNYG00000001656) lypla1 (ENSPNYG00000001679) mrpl15 (ENSPNYG00000001724) sox32 (ENSPNYG00000001745) sox17 (ENSPNYG00000001755) ENSPNYG00000001764 ENSPNYG00000001796 vps41 (ENSPNYG00000001817) POU6F2 (ENSPNYG00000001884) otulina (ENSPNYG00000001920) ENSPNYG00000001962 ankha (ENSPNYG00000001985) myca (ENSPNYG00000001998) #22 fam49bb (ENSPNYG00000002014) #24 eef1a1l3 (ENSPNYG00000002059) ASAP1 (ENSPNYG00000002090) #25 ENSPNYG00000002170 NFX1 (ENSPNYG00000002175) smarcd3b (ENSPNYG00000002187) CHPF2 (ENSPNYG00000002249) abcf2a (ENSPNYG00000002263) ENSPNYG00000002314 slc4a2b (ENSPNYG00000002382) ENSPNYG00000002404 ENSPNYG00000002424 ENSPNYG00000002429 ENSPNYG00000002438 ENSPNYG00000002454 Haplochromini_B ANCESTRAL SPECIES 18 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00940000182574 ENSGT00400000024709.i ENSGT00400000024709.j.a.b ENSGT00400000024709.j.b ENSGT00400000024709.j.a.a ENSGT00390000004989.a.b.bb Eastern happy MODERN SPECIES 21 OPRK1 (ENSACLG00000002193) ENSACLG00000002680 ENSACLG00000002701 RGS20 (ENSACLG00000002719) lypla1 (ENSACLG00000002728) mrpl15 (ENSACLG00000002789) sox32 (ENSACLG00000002828) sox17 (ENSACLG00000002834) ENSACLG00000002903 ENSACLG00000002947 vps41 (ENSACLG00000002960) POU6F2 (ENSACLG00000003067) ENSACLG00000003110 ENSACLG00000003115 ankha (ENSACLG00000003129) myca (ENSACLG00000003174) #22 fam49bb (ENSACLG00000003490) #24 eef1a1l3 (ENSACLG00000003519) ASAP1 (ENSACLG00000003553) #25 NFX1 (ENSACLG00000003795) smarcd3b (ENSACLG00000003833) CHPF2 (ENSACLG00000003911) abcf2a (ENSACLG00000003927) ENSACLG00000003958 slc4a2b (ENSACLG00000004023) cdk1 (ENSACLG00000004173) ENSACLG00000004227 ENSACLG00000004235 ENSACLG00000004262 ENSACLG00000004273 ENSACLG00000004282 Zebra mbuna MODERN SPECIES 1112 FASTKD3 (ENSMZEG00005001794) chmp5b (ENSMZEG00005001802) OPRK1 (ENSMZEG00005001899) RGS20 (ENSMZEG00005018231) lypla1 (ENSMZEG00005018237) mrpl15 (ENSMZEG00005018245) sox32 (ENSMZEG00005018250) sox17 (ENSMZEG00005018255) ENSMZEG00005018258 ENSMZEG00005018265 vps41 (ENSMZEG00005018272) POU6F2 (ENSMZEG00005018293) otulina (ENSMZEG00005018299) ENSMZEG00005018310 ankha (ENSMZEG00005018326) myca (ENSMZEG00005018336) #22 fam49bb (ENSMZEG00005018345) #24 eef1a1l3 (ENSMZEG00005018358) ASAP1 (ENSMZEG00005018371) #25 NFX1 (ENSMZEG00005018390) smarcd3b (ENSMZEG00005018398) CHPF2 (ENSMZEG00005018413) abcf2a (ENSMZEG00005018416) ENSMZEG00005018426 slc4a2b (ENSMZEG00005018443) ENSMZEG00005018472 ENSMZEG00005018479 ENSMZEG00005018485 ENSMZEG00005018496 ENSMZEG00005018499 ENSMZEG00005018500 Lyretail cichlid MODERN SPECIES 325 FASTKD3 (ENSNBRG00000014435) chmp5b (ENSNBRG00000014449) OPRK1 (ENSNBRG00000014072) RGS20 (ENSNBRG00000013954) lypla1 (ENSNBRG00000013920) mrpl15 (ENSNBRG00000013893) sox32 (ENSNBRG00000013876) sox17 (ENSNBRG00000013870) ENSNBRG00000013854 ENSNBRG00000013843 vps41 (ENSNBRG00000013747) POU6F2 (ENSNBRG00000013723) otulina (ENSNBRG00000013688) ENSNBRG00000013623 ankha (ENSNBRG00000013594) ENSNBRG00000013587 #22 fam49bb (ENSNBRG00000013562) #24 eef1a1l3 (ENSNBRG00000013552) ASAP1 (ENSNBRG00000013502) #25 ENSNBRG00000013495 NFX1 (ENSNBRG00000013449) smarcd3b (ENSNBRG00000013417) CHPF2 (ENSNBRG00000013389) abcf2a (ENSNBRG00000013377) ENSNBRG00000013346 slc4a2b (ENSNBRG00000013268) ENSNBRG00000013262 ENSNBRG00000013255 ENSNBRG00000013242 ENSNBRG00000013234 ENSNBRG00000013226 Nile tilapia MODERN SPECIES 21 chmp5b (ENSONIG00000006122) OPRK1 (ENSONIG00000006128) RGS20 (ENSONIG00000038958) lypla1 (ENSONIG00000006132) mrpl15 (ENSONIG00000006134) sox32 (ENSONIG00000006139) sox17 (ENSONIG00000006141) ENSONIG00000006142 ENSONIG00000027347 ENSONIG00000006143 vps41 (ENSONIG00000006145) POU6F2 (ENSONIG00000006150) otulina (ENSONIG00000006153) ENSONIG00000006156 ankha (ENSONIG00000006157) myca (ENSONIG00000006161) #22 fam49bb (ENSONIG00000006163) #24 eef1a1l3 (ENSONIG00000042124) ASAP1 (ENSONIG00000006169) #25 NFX1 (ENSONIG00000006192) smarcd3b (ENSONIG00000006195) CHPF2 (ENSONIG00000006202) abcf2a (ENSONIG00000006206) ENSONIG00000034346 slc4a2b (ENSONIG00000006209) ENSONIG00000006235 ENSONIG00000028755 ENSONIG00000042395 ENSONIG00000032680 ENSONIG00000040436 ENSONIG00000033585 Pinecone sodierfish MODERN SPECIES 12 FASTKD3 (ENSMMDG00005022643) chmp5b (ENSMMDG00005022642) OPRK1 (ENSMMDG00005022641) ENSMMDG00005022640 lypla1 (ENSMMDG00005022638) mrpl15 (ENSMMDG00005022635) sox32 (ENSMMDG00005022634) sox17 (ENSMMDG00005022633) ENSMMDG00005022632 ENSMMDG00005022630 vps41 (ENSMMDG00005022011) POU6F2 (ENSMMDG00005021988) ENSMMDG00005021987 ENSMMDG00005021985 ankha (ENSMMDG00005021980) myca (ENSMMDG00005021976) #22 fam49bb (ENSMMDG00005021576) #24 eef1a1l3 (ENSMMDG00005021564) ASAP1 (ENSMMDG00005021188) #25 NFX1 (ENSMMDG00005020050) smarcd3b (ENSMMDG00005020016) CHPF2 (ENSMMDG00005020015) abcf2a (ENSMMDG00005020012) ENSMMDG00005020009 slc4a2b (ENSMMDG00005018857) ENSMMDG00005018835 ENSMMDG00005018834 ENSMMDG00005018832 nrbp2b (ENSMMDG00005018524) puf60b (ENSMMDG00005017582) scrib (ENSMMDG00005017544) Cod MODERN SPECIES 15 myl12.1 (ENSGMOG00000005791) ENSGMOG00000033963 ENSGMOG00000005820 ENSGMOG00000005841 lypla1 (ENSGMOG00000005853) mrpl15 (ENSGMOG00000005882) sox32 (ENSGMOG00000005898) sox17 (ENSGMOG00000025225) ENSGMOG00000026788 ENSGMOG00000032844 vps41 (ENSGMOG00000005969) ENSGMOG00000006013 ENSGMOG00000024584 ENSGMOG00000006048 ankha (ENSGMOG00000006060) myca (ENSGMOG00000006081) #22 fam49bb (ENSGMOG00000006104) #24 eef1a1l3 (ENSGMOG00000011995) ASAP1 (ENSGMOG00000006138) #25 ENSGMOG00000006198 SMARCD3 (ENSGMOG00000006227) ENSGMOG00000006248 ABCF2 (ENSGMOG00000006259) ENSGMOG00000033454 slc4a2b (ENSGMOG00000006300) ENSGMOG00000032724 ENSGMOG00000030745 ENSGMOG00000006345 ENSGMOG00000036424 nrbp2b (ENSGMOG00000006362) ENSGMOG00000006392 Protacanthopterygii ANCESTRAL SPECIES 49 ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040.v ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b #22 ENSGT00390000015159.b.a #24 ENSGT00940000165526 ENSGT00940000158547.c.c #25 ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT00930000151367.d.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 87 ENSGT00940000157341.h.c ENSGT00940000159123.b.b ENSGT00940000154185.fb ENSGT00390000009040.v.b ENSGT00940000166366.a ENSGT00940000156694.e.b ENSGT00940000154242.b.h.a ENSGT00940000157762.l ENSGT00390000000481.n ENSGT00940000156175 ENSGT00390000011176 ENSGT00390000009802.b.u ENSGT00390000012189.c.b.a ENSGT00940000155285.b.j.a.b.i #22 ENSGT00390000015159.b.a.c #24 ENSGT00940000165526 ENSGT00940000158547.c.c.b #25 ENSGT00940000156325.o ENSGT00940000158945.s ENSGT01050000244857.B.a.a ENSGT00630000089910.t ENSGT00400000022514.g ENSGT00940000158259.b.g ENSGT00400000024709.k.b ENSGT00400000024709.l ENSGT00390000004989.a.b ENSGT00390000004989.a.a.a.b.b ENSGT00390000004989.a.a.a.a.a ENSGT00940000160430.nb.b Salmoninae_a ANCESTRAL SPECIES 35 ENSGT00940000157341.h.c ENSGT00940000159123.b.b ENSGT00940000154185.fb ENSGT00390000009040.v.b ENSGT00940000166366.a ENSGT00940000156694.e.b ENSGT00940000154242.b.h.a ENSGT00940000157762.l ENSGT00390000000481.n ENSGT00940000156175.h ENSGT00390000011176 ENSGT00390000009802.b.u ENSGT00390000012189.c.b.a ENSGT00940000155285.b.j.a.b.i #22 ENSGT00390000015159.b.a.c #24 ENSGT00940000165526 ENSGT00940000158547.c.c.b #25 ENSGT00940000156325.o ENSGT00940000158945.s ENSGT01050000244857.B.a.a ENSGT00630000089910.t ENSGT00400000022514.g ENSGT00940000158259.b.g ENSGT00400000024709.k.b ENSGT00400000024709.l ENSGT00390000004989.a.b ENSGT00390000004989.a.a.a.b.b ENSGT00390000004989.a.a.a.a.a ENSGT00940000160430.nb.b Oncorhynchus ANCESTRAL SPECIES 27 ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.a ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.b ENSGT00940000157341.h.c ENSGT00940000159123.b.b ENSGT00940000154185.fb ENSGT00390000009040.v.b ENSGT00940000166366.a ENSGT00940000156694.e.b ENSGT00940000154242.b.h.a ENSGT00940000157762.l ENSGT00390000000481.n ENSGT00940000156175.h ENSGT00390000011176 ENSGT00390000009802.b.u ENSGT00390000012189.c.b.a ENSGT00940000155285.b.j.a.b.i #22 ENSGT00390000015159.b.a.c #24 ENSGT00940000165526 ENSGT00940000158547.c.c.b #25 ENSGT00940000156325.o ENSGT00940000158945.s ENSGT01050000244857.B.a.a ENSGT00630000089910.t ENSGT00400000022514.g ENSGT00940000158259.b.g ENSGT00400000024709.k.b ENSGT00400000024709.l ENSGT00390000004989.a.a.a.a.a ENSGT00940000160430.nb.b ENSGT00940000155594.c.b.b ENSGT00940000154025.a.g Oncorhynchus_a ANCESTRAL SPECIES 27 ENSGT00550000074817.u.f.b.a ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.b ENSGT00940000157341.h.c ENSGT00940000159123.b.b ENSGT00940000154185.fb ENSGT00390000009040.v.b ENSGT00940000166366.a ENSGT00940000156694.e.b ENSGT00940000154242.b.h.a ENSGT00940000157762.l ENSGT00390000000481.n ENSGT00940000156175.h ENSGT00390000011176 ENSGT00390000009802.b.u ENSGT00390000012189.c.b.a ENSGT00940000155285.b.j.a.b.i #22 ENSGT00390000015159.b.a.c #24 ENSGT00940000165526 ENSGT00940000158547.c.c.b #25 ENSGT00940000156325.o ENSGT00940000158945.s ENSGT01050000244857.B.a.a ENSGT00630000089910.t ENSGT00400000022514.g ENSGT00940000158259.b.g ENSGT00400000024709.k.b ENSGT00400000024709.l ENSGT00390000004989.a.a.a.a.a ENSGT00940000160430.nb.b ENSGT00940000155594.c.b.b ENSGT00940000154025.a.g Chinook salmon MODERN SPECIES 21 chmp5b (ENSOTSG00005022950) ENSOTSG00005022947 OPRK1 (ENSOTSG00005022944) RGS20 (ENSOTSG00005022941) lypla1 (ENSOTSG00005022894) mrpl15 (ENSOTSG00005022893) sox32 (ENSOTSG00005022891) sox17 (ENSOTSG00005022889) ENSOTSG00005022888 ENSOTSG00005022887 vps41 (ENSOTSG00005022690) POU6F2 (ENSOTSG00005022681) otulina (ENSOTSG00005022680) ENSOTSG00005022677 ankha (ENSOTSG00005022245) myca (ENSOTSG00005022243) #22 fam49bb (ENSOTSG00005022060) #24 eef1a1l3 (ENSOTSG00005022020) ASAP1 (ENSOTSG00005017604) #25 NFX1 (ENSOTSG00005015411) smarcd3b (ENSOTSG00005012296) CHPF2 (ENSOTSG00005012247) ABCF2 (ENSOTSG00005012205) ENSOTSG00005012202 slc4a2b (ENSOTSG00005009503) ENSOTSG00005009496 ENSOTSG00005009495 ENSOTSG00005009494 nrbp2b (ENSOTSG00005009489) puf60b (ENSOTSG00005008450) scrib (ENSOTSG00005008443) Coho salmon MODERN SPECIES 2 chmp5b (ENSOKIG00005046004) ENSOKIG00005046017 OPRK1 (ENSOKIG00005046038) RGS20 (ENSOKIG00005046049) lypla1 (ENSOKIG00005046065) mrpl15 (ENSOKIG00005046196) sox32 (ENSOKIG00005046215) sox17 (ENSOKIG00005046220) ENSOKIG00005046228 ENSOKIG00005046237 vps41 (ENSOKIG00005046386) POU6F2 (ENSOKIG00005047618) otulina (ENSOKIG00005047627) ENSOKIG00005047636 ankha (ENSOKIG00005047671) myca (ENSOKIG00005047871) #22 fam49bb (ENSOKIG00005047901) #24 eef1a1l3 (ENSOKIG00005047969) ASAP1 (ENSOKIG00005048013) #25 NFX1 (ENSOKIG00005048224) smarcd3b (ENSOKIG00005048525) CHPF2 (ENSOKIG00005048981) ABCF2 (ENSOKIG00005048988) ENSOKIG00005049036 slc4a2b (ENSOKIG00005049083) ENSOKIG00005049224 ENSOKIG00005049226 ENSOKIG00005001954 ENSOKIG00005001978 ENSOKIG00005001983 nrbp2b (ENSOKIG00005002054) Rainbow trout MODERN SPECIES 6 ENSOMYG00000021059 ENSOMYG00000021031 ENSOMYG00000045503 RGS20 (ENSOMYG00000021011) lypla1 (ENSOMYG00000020976) mrpl15 (ENSOMYG00000020961) sox32 (ENSOMYG00000020957) sox17 (ENSOMYG00000020953) ENSOMYG00000068570 ENSOMYG00000020942 vps41 (ENSOMYG00000020466) ENSOMYG00000020361 otulina (ENSOMYG00000020350) ENSOMYG00000020330 ankha (ENSOMYG00000020300) myc (ENSOMYG00000020276) #22 ENSOMYG00000075171 fam49bb (ENSOMYG00000020029) #24 eef1a1l3 (ENSOMYG00000019971) ASAP1 (ENSOMYG00000019682) #25 ENSOMYG00000018575 SMARCD3 (ENSOMYG00000018283) ENSOMYG00000018258 ABCF2 (ENSOMYG00000018102) ENSOMYG00000018068 slc4a2b (ENSOMYG00000014427) ENSOMYG00000014135 ENSOMYG00000014126 ENSOMYG00000014121 ENSOMYG00000051286 nrbp2b (ENSOMYG00000014017) Salmo ANCESTRAL SPECIES 34 ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.a ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.b ENSGT00940000157341.h.c ENSGT00940000159123.b.b ENSGT00940000154185.fb ENSGT00390000009040.v.b ENSGT00940000166366.a ENSGT00940000156694.e.b ENSGT00940000154242.b.h.a ENSGT00940000157762.l ENSGT00390000000481.n ENSGT00940000156175.h ENSGT00390000011176 ENSGT00390000009802.b.u ENSGT00390000012189.c.b.a ENSGT00940000155285.b.j.a.b.i #22 ENSGT00390000015159.b.a.c #24 ENSGT00940000165526 ENSGT00940000158547.c.c.b #25 ENSGT00940000156325.o ENSGT00940000158945.s ENSGT01050000244857.B.a.a ENSGT00630000089910.t ENSGT00400000022514.g ENSGT00940000158259.b.g ENSGT00400000024709.k.b ENSGT00400000024709.l ENSGT00390000004989.a.b ENSGT00390000004989.a.a.a.b.b ENSGT00390000004989.a.a.a.a.a ENSGT00940000160430.nb.b Atlantic salmon MODERN SPECIES 21 ENSSSAG00000118600 ENSSSAG00000098247 ENSSSAG00000043539 RGS20 (ENSSSAG00000008992) lypla1 (ENSSSAG00000009036) mrpl15 (ENSSSAG00000009177) sox32 (ENSSSAG00000009190) sox17 (ENSSSAG00000009196) ENSSSAG00000009212 ENSSSAG00000116205 vps41 (ENSSSAG00000009364) ENSSSAG00000086829 otulina (ENSSSAG00000116071) ENSSSAG00000010052 ankha (ENSSSAG00000010093) myca (ENSSSAG00000085432) #22 FA49B (ENSSSAG00000010145) #24 eef1a1l3 (ENSSSAG00000010223) ASAP1 (ENSSSAG00000010357) #25 ENSSSAG00000019408 SMARCD3 (ENSSSAG00000055452) ENSSSAG00000043047 ABCF2 (ENSSSAG00000043073) ENSSSAG00000043845 slc4a2b (ENSSSAG00000044249) ENSSSAG00000107452 ENSSSAG00000062948 ENSSSAG00000062970 ENSSSAG00000062966 ENSSSAG00000062953 nrbp2b (ENSSSAG00000062977) River trout MODERN SPECIES 36 chmp5b (ENSSTUG00000038765) ENSSTUG00000038752 ENSSTUG00000038665 OPRK1 (ENSSTUG00000038647) RGS20 (ENSSTUG00000038630) lypla1 (ENSSTUG00000038578) mrpl15 (ENSSTUG00000038556) sox32 (ENSSTUG00000038552) sox17 (ENSSTUG00000038547) ENSSTUG00000038543 ENSSTUG00000038541 vps41 (ENSSTUG00000035948) POU6F2 (ENSSTUG00000035846) otulina (ENSSTUG00000035835) ankha (ENSSTUG00000035795) ENSSTUG00000035694 #22 fam49bb (ENSSTUG00000035594) #24 eef1a1l3 (ENSSTUG00000035575) ASAP1 (ENSSTUG00000034397) #25 NFX1 (ENSSTUG00000033623) smarcd3b (ENSSTUG00000031852) CHPF2 (ENSSTUG00000031785) ABCF2 (ENSSTUG00000031241) ENSSTUG00000031187 slc4a2b (ENSSTUG00000028981) ENSSTUG00000028898 ENSSTUG00000028887 ENSSTUG00000028872 ENSSTUG00000028861 ENSSTUG00000028857 nrbp2b (ENSSTUG00000028689) Huchen MODERN SPECIES 1188 ENSHHUG00000021509 ENSHHUG00000021511 otulina (ENSHHUG00000021519) ENSHHUG00000021526 ankha (ENSHHUG00000021538) myca (ENSHHUG00000021595) #22 ENSHHUG00000021606 Salmoninae ANCESTRAL SPECIES 1064 ENSGT00390000009802.b.v ENSGT00390000012189.c.b.b ENSGT00940000155285.b.j.a.b.j #22 ENSGT00390000015159.b.a.d #24 ENSGT00940000158547.c.c.a #25 Salmoninae_a ANCESTRAL SPECIES 69 ENSGT00940000157341.h.d ENSGT00940000155393.d.tb ENSGT00940000155605.a.b.a.b ENSGT00940000159123.b.a ENSGT00940000154185.gb ENSGT00390000009040.v.a ENSGT00940000166366.b ENSGT00940000156694.e.a ENSGT00940000154242.b.h.b ENSGT00940000178871.a.a ENSGT00940000157762.k ENSGT00390000000481.m ENSGT00940000156175.g ENSGT00390000009802.b.v ENSGT00390000012189.c.b.b ENSGT00940000155285.b.j.a.b.j #22 ENSGT00390000015159.b.a.d #24 ENSGT00940000158547.c.c.a #25 ENSGT00940000156325.p ENSGT00940000158945.t ENSGT01050000244857.B.a.b ENSGT00400000022514.h ENSGT00940000158259.b.h ENSGT00400000024709.k.a ENSGT00390000004989.a.a.a.a.b ENSGT00940000160430.nb.a ENSGT00940000155594.c.b.a ENSGT00940000154025.a.h ENSGT00390000000805.hb ENSGT00390000000626.e ENSGT00940000157001.f Salmo ANCESTRAL SPECIES 3 ENSGT00550000074817.u.f ENSGT00940000157341.h.d ENSGT00940000155605.a.b.a.b ENSGT00940000159123.b.a ENSGT00940000154185.gb ENSGT00390000009040.v.a ENSGT00940000166366.b ENSGT00940000156694.e.a ENSGT00940000154242.b.h.b ENSGT00940000178871.a.a ENSGT00940000157762.k ENSGT00390000000481.m ENSGT00940000156175.g ENSGT00390000009802.b.v ENSGT00390000012189.c.b.b ENSGT00940000155285.b.j.a.b.j #22 ENSGT00390000015159.b.a.d #24 ENSGT00940000158547.c.c.a #25 ENSGT00940000156325.p ENSGT00940000158945.t ENSGT01050000244857.B.a.b ENSGT00400000022514.h ENSGT00940000158259.b.h ENSGT00400000024709.k.a ENSGT00390000004989.a.a.a.b.a ENSGT00390000004989.a.a.a.a.b ENSGT00940000160430.nb.a ENSGT00940000155594.c.b.a ENSGT00940000154025.a.h ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.b ENSGT00390000000805.hb River trout MODERN SPECIES 11 ENSSTUG00000020037 chmp5b (ENSSTUG00000020125) OPRK1 (ENSSTUG00000020145) RGS20 (ENSSTUG00000020166) lypla1 (ENSSTUG00000020192) mrpl15 (ENSSTUG00000020205) sox32 (ENSSTUG00000020225) sox17 (ENSSTUG00000020231) ENSSTUG00000020243 ENSSTUG00000020250 ENSSTUG00000020251 vps41 (ENSSTUG00000020441) POU6F2 (ENSSTUG00000021269) ENSSTUG00000021333 ankha (ENSSTUG00000021394) myca (ENSSTUG00000011677) #22 ENSSTUG00000011690 fam49bb (ENSSTUG00000011699) #24 ASAP1 (ENSSTUG00000011939) #25 NFX1 (ENSSTUG00000013484) smarcd3b (ENSSTUG00000015259) CHPF2 (ENSSTUG00000015415) ENSSTUG00000015439 slc4a2b (ENSSTUG00000015584) ENSSTUG00000016302 ENSSTUG00000016318 ENSSTUG00000016328 nrbp2b (ENSSTUG00000016371) puf60b (ENSSTUG00000016865) scrib (ENSSTUG00000017075) ENSSTUG00000019668 Atlantic salmon MODERN SPECIES 10 MLRN (ENSSSAG00000077005) CHMP5 (ENSSSAG00000043519) ENSSSAG00000105068 ENSSSAG00000088199 RGS20 (ENSSSAG00000095348) lypla1 (ENSSSAG00000043602) RM15 (ENSSSAG00000043628) sox32 (ENSSSAG00000043641) sox17 (ENSSSAG00000043665) ENSSSAG00000084025 ENSSSAG00000105059 vps41 (ENSSSAG00000043721) ENSSSAG00000046398 ENSSSAG00000046483 ankha (ENSSSAG00000046571) myca (ENSSSAG00000047511) #22 fam49bb (ENSSSAG00000047533) #24 ASAP1 (ENSSSAG00000047800) #25 ENSSSAG00000049638 ENSSSAG00000111194 ENSSSAG00000093002 ENSSSAG00000055547 slc4a2b (ENSSSAG00000055848) ENSSSAG00000070145 ENSSSAG00000070137 nrbp2b (ENSSSAG00000070181) ENSSSAG00000071208 SCRIB (ENSSSAG00000072098) ENSSSAG00000082621 cdv3 (ENSSSAG00000072389) ENSSSAG00000072393 Oncorhynchus ANCESTRAL SPECIES 28 ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c.b ENSGT00940000157341.h.d ENSGT00940000159123.b.a ENSGT00940000154185.gb ENSGT00390000009040.v.a ENSGT00940000166366.b ENSGT00940000156694.e.a ENSGT00940000154242.b.h.b ENSGT00940000178871.a.a ENSGT00940000157762.k ENSGT00390000000481.m ENSGT00940000156175.g ENSGT00390000009802.b.v ENSGT00390000012189.c.b.b ENSGT00940000155285.b.j.a.b.j #22 ENSGT00390000015159.b.a.d #24 ENSGT00940000158547.c.c.a #25 ENSGT00940000156325.p ENSGT00940000158945.t ENSGT01050000244857.B.a.b ENSGT00400000022514.h ENSGT00940000158259.b.h ENSGT00400000024709.k.a ENSGT00390000004989.a.a.a.a.b ENSGT00940000160430.nb.a ENSGT00940000155594.c.b.a ENSGT00940000154025.a.h ENSGT00950000182774.a.a.b.b ENSGT00390000000805.hb ENSGT00390000000626.e Oncorhynchus_a ANCESTRAL SPECIES 23 ENSGT00940000153607.a.b ENSGT00550000074817.u.f.b.b ENSGT00940000157341.h.d ENSGT00940000155393.d.tb ENSGT00940000159123.b.a ENSGT00940000154185.gb ENSGT00390000009040.v.a ENSGT00940000166366.b ENSGT00940000156694.e.a ENSGT00940000154242.b.h.b ENSGT00940000157762.k ENSGT00390000000481.m ENSGT00940000156175.g ENSGT00390000009802.b.v ENSGT00390000012189.c.b.b ENSGT00940000155285.b.j.a.b.j #22 ENSGT00390000015159.b.a.d #24 ENSGT00940000158547.c.c.a #25 ENSGT00940000156325.p ENSGT00940000158945.t ENSGT01050000244857.B.a.b ENSGT00400000022514.h ENSGT00940000158259.b.h ENSGT00400000024709.k.a ENSGT00390000004989.a.a.a.a.b ENSGT00940000160430.nb.a ENSGT00940000155594.c.b.a ENSGT00940000154025.a.h ENSGT00950000182774.a.a.b.b ENSGT00390000000805.hb ENSGT00390000000626.e Coho salmon MODERN SPECIES 9 MYL12B (ENSOKIG00005014279) CHMP5 (ENSOKIG00005014237) OPRK1 (ENSOKIG00005014230) ENSOKIG00005014069 RGS20 (ENSOKIG00005014060) lypla1 (ENSOKIG00005013992) mrpl15 (ENSOKIG00005046173) sox32 (ENSOKIG00005046154) sox17 (ENSOKIG00005046142) ENSOKIG00005046137 ENSOKIG00005046112 vps41 (ENSOKIG00005045775) POU6F2 (ENSOKIG00005045708) ENSOKIG00005045689 ankha (ENSOKIG00005045558) myca (ENSOKIG00005045545) #22 fam49bb (ENSOKIG00005045509) #24 ASAP1 (ENSOKIG00005043676) #25 NFX1 (ENSOKIG00005041130) SMARCD3 (ENSOKIG00005040785) CHPF2 (ENSOKIG00005040730) ENSOKIG00005040547 slc4a2b (ENSOKIG00005039887) ENSOKIG00005039851 ENSOKIG00005039831 nrbp2b (ENSOKIG00005039768) PUF60 (ENSOKIG00005039738) SCRIB (ENSOKIG00005038303) ENSOKIG00005038218 ENSOKIG00005038210 ENSOKIG00005038196 Chinook salmon MODERN SPECIES 7 KCNAB2 (ENSOTSG00005020443) ENSOTSG00005020444 park7 (ENSOTSG00005020445) ENSOTSG00005020456 pax7a (ENSOTSG00005020459) mrps16 (ENSOTSG00005020465) errfi1a (ENSOTSG00005020466) tas1r3 (ENSOTSG00005020467) sox17 (ENSOTSG00005020468) ENSOTSG00005020470 ENSOTSG00005020472 vps41 (ENSOTSG00005020492) POU6F2 (ENSOTSG00005021539) ENSOTSG00005021545 ankha (ENSOTSG00005021549) myca (ENSOTSG00005021595) #22 fam49bb (ENSOTSG00005021599) #24 ASAP1 (ENSOTSG00005021708) #25 NFX1 (ENSOTSG00005024555) smarcd3b (ENSOTSG00005025852) CHPF2 (ENSOTSG00005026209) ENSOTSG00005026210 slc4a2b (ENSOTSG00005026217) ENSOTSG00005026758 ENSOTSG00005026759 ENSOTSG00005026760 nrbp2b (ENSOTSG00005026770) puf60b (ENSOTSG00005026773) scrib (ENSOTSG00005026788) ENSOTSG00005036396 cdv3 (ENSOTSG00005036399) Rainbow trout MODERN SPECIES 2 ENSOMYG00000037506 ENSOMYG00000070848 ENSOMYG00000037559 RGS20 (ENSOMYG00000037591) lypla1 (ENSOMYG00000037597) mrpl15 (ENSOMYG00000037611) sox32 (ENSOMYG00000037618) sox17 (ENSOMYG00000037627) ENSOMYG00000020949 ENSOMYG00000037631 ENSOMYG00000065272 vps41 (ENSOMYG00000038046) ENSOMYG00000039155 ENSOMYG00000039178 ankha (ENSOMYG00000039229) c-myc (ENSOMYG00000039293) #22 fam49bb (ENSOMYG00000039420) #24 ASAP1 (ENSOMYG00000039784) #25 ENSOMYG00000057993 ENSOMYG00000068057 ENSOMYG00000040075 ENSOMYG00000041190 ENSOMYG00000075685 ENSOMYG00000043009 ENSOMYG00000043014 ENSOMYG00000043023 slc4a2b (ENSOMYG00000043198) ENSOMYG00000044298 ENSOMYG00000044302 nrbp2b (ENSOMYG00000044314) ENSOMYG00000044344 Huchen MODERN SPECIES 2215 ENSHHUG00000034198 ENSHHUG00000034203 ankha (ENSHHUG00000034230) myca (ENSHHUG00000034305) #22 Northern pike MODERN SPECIES 20 ENSELUG00000008063 OPRK1 (ENSELUG00000008032) RGS20 (ENSELUG00000027608) lypla1 (ENSELUG00000007987) mrpl15 (ENSELUG00000007952) sox32 (ENSELUG00000007938) sox17 (ENSELUG00000001475) ENSELUG00000007911 ENSELUG00000007893 vps41 (ENSELUG00000007800) POU6F2 (ENSELUG00000007640) otulina (ENSELUG00000007612) ENSELUG00000031249 ENSELUG00000007600 ankha (ENSELUG00000007584) myca (ENSELUG00000007557) #22 fam49bb (ENSELUG00000007535) #24 eef1a1l3 (ENSELUG00000007495) ASAP1 (ENSELUG00000007471) #25 NFX1 (ENSELUG00000007422) smarcd3b (ENSELUG00000007382) CHPF2 (ENSELUG00000007288) ABCF2 (ENSELUG00000007264) ENSELUG00000007220 ENSELUG00000030812 slc4a2b (ENSELUG00000007056) ENSELUG00000006652 ENSELUG00000025733 ENSELUG00000006641 ENSELUG00000006624 ENSELUG00000031556 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000155285.b.j.b #22 Osteoglossiformes ANCESTRAL SPECIES 375 ENSGT01030000234518.E.c.b ENSGT00940000160766.a ENSGT00950000182882.A.b.a.x ENSGT00390000000481 ENSGT00940000156175.c ENSGT00390000011176 ENSGT00390000009802.b ENSGT00390000012189.a ENSGT00940000155285.b.j.b #22 ENSGT00390000015159.b.d #24 ENSGT00940000158547.d #25 ENSGT00390000014069.a ENSGT00940000166257 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 22 ENSSFOG00015007965 ZNF622 (ENSSFOG00015028040) ENSSFOG00015020480 ENSSFOG00015028434 rnf182 (ENSSFOG00015025694) rgs9bp (ENSSFOG00015020456) ranbp9 (ENSSFOG00015020414) ENSSFOG00015020387 SFRP4 (ENSSFOG00015020377) epdr1 (ENSSFOG00015020362) stard3nl (ENSSFOG00015020334) amph (ENSSFOG00015020259) POU6F2 (ENSSFOG00015033340) otulinb (ENSSFOG00015020220) ankhb (ENSSFOG00015020196) MYC (ENSSFOG00015025207) #22 CYRIB (ENSSFOG00015020146) #24 asap1a (ENSSFOG00015019834) #25 tmub1 (ENSSFOG00015019780) ENSSFOG00015019771 SMARCD3 (ENSSFOG00015019729) CHPF2 (ENSSFOG00015029646) abcf2a (ENSSFOG00015019666) ENSSFOG00015019656 faim2a (ENSSFOG00015028784) ttc19 (ENSSFOG00015019618) slc4a2a (ENSSFOG00015019548) ubtfl (ENSSFOG00015019492) fastk (ENSSFOG00015019472) ENSSFOG00015019469 NRBP2 (ENSSFOG00015019418) Asian bonytongue MODERN SPECIES 20 ENSSFOG00015010188 atp6v0d1 (ENSSFOG00015010215) hsd11b2 (ENSSFOG00015010245) zdhhc1 (ENSSFOG00015032640) TPPP3 (ENSSFOG00015010281) PLEKHG4 (ENSSFOG00015010298) si:ch211-133n4.4 (ENSSFOG00015010399) ENSSFOG00015018925 ENSSFOG00015026517 ENSSFOG00015033235 ENSSFOG00015016008 ENSSFOG00015016025 ENSSFOG00015028009 ENSSFOG00015018953 ENSSFOG00015025860 MYC (ENSSFOG00015018992) #22 CYRIB (ENSSFOG00015019017) #24 eef1a1l3 (ENSSFOG00015019070) ASAP1 (ENSSFOG00015019113) #25 NFX1 (ENSSFOG00015019271) SMARCD3 (ENSSFOG00015019316) CHPF2 (ENSSFOG00015033165) abcf2b (ENSSFOG00015019373) ENSSFOG00015019423 slc4a2b (ENSSFOG00015019490) ubtfl (ENSSFOG00015019524) ENSSFOG00015032739 NRBP2 (ENSSFOG00015019564) puf60b (ENSSFOG00015019371) scrib (ENSSFOG00015019872) KIF9 (ENSSFOG00015019977) P. kingsleyae MODERN SPECIES 153 ENSPKIG00000015926 snx16 (ENSPKIG00000015948) ATP6V0D2 (ENSPKIG00000015966) ENSPKIG00000016014 ENSPKIG00000016082 dad1 (ENSPKIG00000016114) abhd4 (ENSPKIG00000016153) SFRP4 (ENSPKIG00000016192) epdr1 (ENSPKIG00000016214) stard3nl (ENSPKIG00000016225) ENSPKIG00000016261 amph (ENSPKIG00000016319) POU6F2 (ENSPKIG00000016483) otulinb (ENSPKIG00000016530) ANKH (ENSPKIG00000016573) MYC (ENSPKIG00000016592) #22 CYRIB (ENSPKIG00000016643) #24 asap1a (ENSPKIG00000016864) #25 tmub1 (ENSPKIG00000017038) ENSPKIG00000017049 ENSPKIG00000017061 ENSPKIG00000017071 Clupeocephala ANCESTRAL SPECIES ENSGT00940000155285.b.j.b #22 Otomorpha ANCESTRAL SPECIES ENSGT00940000155285.b.j.b #22 Clupeiformes ANCESTRAL SPECIES ENSGT00940000155285.b.j.b #22 Denticle herring MODERN SPECIES 14 ENSDCDG00000000897 pter (ENSDCDG00000000902) CACNA1E (ENSDCDG00000001393) abcd4 (ENSDCDG00000014926) pak1ip1 (ENSDCDG00000015343) KLHL14 (ENSDCDG00000015350) dtna (ENSDCDG00000015359) mapre2 (ENSDCDG00000015363) ENSDCDG00000015366 cebpd (ENSDCDG00000015370) ENSDCDG00000015694 ENSDCDG00000015696 amph (ENSDCDG00000015718) otulinb (ENSDCDG00000015911) ankhb (ENSDCDG00000015960) ENSDCDG00000015989 #22 ENSDCDG00000015995 #22 fam49ba (ENSDCDG00000016053) #24 asap1a (ENSDCDG00000016806) #25 ubtfl (ENSDCDG00000017241) slc4a2a (ENSDCDG00000017277) ttc19 (ENSDCDG00000017901) faim2a (ENSDCDG00000017904) abcf2a (ENSDCDG00000017915) SMARCD3 (ENSDCDG00000018091) tmub1 (ENSDCDG00000018147) NCBP2AS2 (ENSDCDG00000018150) ENSDCDG00000018210 ENSDCDG00000021115 ENSDCDG00000021126 ENSDCDG00000021150 Elephant shark MODERN SPECIES 1593 ENSCMIG00000015452 #15 TRIB1 (ENSCMIG00000015451) #16 lratd2a (ENSCMIG00000015450) #18 myca (ENSCMIG00000015447) #22 CALML3 (ENSCMIG00000015443) fam49bb (ENSCMIG00000015424) #24 asap1a (ENSCMIG00000014879) #25 tmem65 (ENSCMIG00000014791) #7 ENSCMIG00000014770 FER1L6 (ENSCMIG00000014703) rmdn1 (ENSCMIG00000014657) WWP1 (ENSCMIG00000014613) ENSCMIG00000014602 MTSS1 (ENSCMIG00000014581) #11 ndufb9 (ENSCMIG00000014560) #10 ENSCMIG00000014558 ENSCMIG00000014553 riok1 (ENSCMIG00000014537) DSP (ENSCMIG00000014523) Gnathostomata ANCESTRAL SPECIES ENSGT00940000155285.a ##22 Euteleostomi ANCESTRAL SPECIES 244 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00390000012445 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00950000183202.a.a ENSGT01040000241001 ENSGT00940000161484 ENSGT00940000156304 ENSGT00940000159947 ENSGT00940000153649.A ENSGT00940000158986 Actinopterygii ANCESTRAL SPECIES 31 ENSGT00940000160937 ENSGT00390000012257 ENSGT00530000063880.a ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT01040000241001 ENSGT00950000183202.a.a ENSGT00940000155326 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00390000012445 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT01050000244866.A.a.a.a.a ENSGT00390000018016 ENSGT00390000001912.f ENSGT00390000000724.c.a ENSGT00940000154459.A ENSGT00940000154663 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00390000015137 ENSGT00950000183066.a.b.a.b ENSGT00940000157009 Neopterygii ANCESTRAL SPECIES 41 ENSGT00950000183066.a.b.a.b ENSGT00390000015137 ENSGT01050000244866.A.a.a.a.a ENSGT00390000018016 ENSGT00390000001912.f ENSGT00390000000724.c.a ENSGT00940000154459.A ENSGT00940000154663 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00390000012445 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00390000014941 ENSGT00940000155326 ENSGT00950000183202.a.a ENSGT01040000241001 ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00940000166055 ENSGT00940000158934 Osteoglossocephalai ANCESTRAL SPECIES 1 ENSGT00950000183066.a.b.a.b ENSGT00390000015137 ENSGT01050000244866.D.a ENSGT00390000018016 ENSGT00390000001912.f ENSGT00390000000724.c.a ENSGT00940000154459.A ENSGT00940000154663 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00390000012445 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00390000014941 ENSGT00940000155326 ENSGT00950000183202.a.a ENSGT01040000241001 ENSGT00490000043388.b.b ENSGT00940000161484 ENSGT00940000156304.d ENSGT00940000159947 ENSGT00940000153649.A ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00530000063880.a Clupeocephala ANCESTRAL SPECIES 7 ENSGT00390000015137 ENSGT01050000244866.D.a ENSGT00390000018016 ENSGT00390000001912.f ENSGT00390000000724.c.a ENSGT00940000154459.A ENSGT00940000154663.a.b ENSGT00940000154663.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00390000012445.b ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00390000014941 ENSGT00940000155326.b ENSGT00940000155326.a.a ENSGT00950000183202.a.a ENSGT01040000241001 ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00940000166055 Otomorpha ANCESTRAL SPECIES 119 ENSGT00940000154663.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00390000012445.a.b ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00390000014941 ENSGT00940000155326.b ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b Clupeiformes ANCESTRAL SPECIES 27 ENSGT00940000157279 ENSGT00390000002873 ENSGT01030000234637.b.d.a.a ENSGT00940000153456.b.b ENSGT00590000083094.a.a.c.a ENSGT00940000160100 ENSGT00390000005214 ENSGT00940000155048.d.a ENSGT00510000047967 ENSGT00950000183004.a.a.b ENSGT00390000011228.b.a.e.b ENSGT00940000156378.a.b ENSGT00390000003017.c.b ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00390000014941 ENSGT00940000155326.b ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b Denticle herring MODERN SPECIES 3 LMBR1L (ENSDCDG00000031869) ENSDCDG00000031850 H6PD (ENSDCDG00000031848) rbp7b (ENSDCDG00000031844) cenps (ENSDCDG00000031841) tardbpb (ENSDCDG00000031829) PTPRG (ENSDCDG00000030697) cfap20dc (ENSDCDG00000030667) ENSDCDG00000030665 ENSDCDG00000030659 FAM107A (ENSDCDG00000030655) CAMK1 (ENSDCDG00000030451) pbrm1l (ENSDCDG00000030227) romo1 (ENSDCDG00000030188) ergic3 (ENSDCDG00000030167) mych (ENSDCDG00000030164) ##22 mtss1 (ENSDCDG00000029835) ##11 osgn1 (ENSDCDG00000029815) pigu (ENSDCDG00000029812) PTPRT (ENSDCDG00000027280) rbl1 (ENSDCDG00000027171) ENSDCDG00000027152 CHD6 (ENSDCDG00000026345) ripor3 (ENSDCDG00000026314) blcap (ENSDCDG00000026312) TMEM74B (ENSDCDG00000026309) psmf1 (ENSDCDG00000026308) rspo4 (ENSDCDG00000026307) ANGPT4 (ENSDCDG00000026264) ENSDCDG00000026263 RIMS4 (ENSDCDG00000026262) Atlantic herring MODERN SPECIES 21 prkag1 (ENSCHAG00000010096) rhebl1 (ENSCHAG00000010034) LMBR1L (ENSCHAG00000009084) H6PD (ENSCHAG00000009024) rbp7b (ENSCHAG00000009016) cenps (ENSCHAG00000008947) tardbpb (ENSCHAG00000008909) PTPRG (ENSCHAG00000006183) cfap20dc (ENSCHAG00000006097) ENSCHAG00000006085 FAM107A (ENSCHAG00000006070) CAMK1 (ENSCHAG00000005650) pbrm1l (ENSCHAG00000001452) romo1 (ENSCHAG00000000530) ergic3 (ENSCHAG00000000305) mych (ENSCHAG00000000269) ##22 mtss1 (ENSCHAG00000000223) ##11 osgn1 (ENSCHAG00000026388) pigu (ENSCHAG00000026383) PTPRT (ENSCHAG00000024252) rbl1 (ENSCHAG00000024062) CHD6 (ENSCHAG00000020596) ripor3 (ENSCHAG00000020493) blcap (ENSCHAG00000020484) TMEM74B (ENSCHAG00000020470) psmf1 (ENSCHAG00000020456) ENSCHAG00000020438 he1.1 (ENSCHAG00000020344) rspo4 (ENSCHAG00000020242) ANGPT4 (ENSCHAG00000020188) ENSCHAG00000020181 Otophysi ANCESTRAL SPECIES 15 ENSGT01000000214440.B ENSGT00530000063255.A ENSGT00940000155569.a.a ENSGT00390000001799 ENSGT00940000156300.k ENSGT00940000159809 ENSGT00940000167348 ENSGT00940000154663.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00390000012445.a.b ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00390000014941 ENSGT00940000155326.b ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.`b Characiphysae ANCESTRAL SPECIES 124 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00390000014941 ENSGT00940000155326.b ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.`b Channel catfish MODERN SPECIES 3 H2A (ENSIPUG00000003622) ENSIPUG00000003626 ENSIPUG00000003634 ENSIPUG00000003645 emc7b (ENSIPUG00000003653) chd6 (ENSIPUG00000003692) rbl1 (ENSIPUG00000003765) Pigu (ENSIPUG00000003857) OSGIN2 (ENSIPUG00000003905) ENSIPUG00000003924 atg3 (ENSIPUG00000003956) atp5e (ENSIPUG00000004082) cyc1 (ENSIPUG00000004093) ergic3 (ENSIPUG00000004110) romo1 (ENSIPUG00000004166) mych (ENSIPUG00000004172) ##22 ENSIPUG00000004179 mtss1 (ENSIPUG00000004200) ##11 ENSIPUG00000004232 ENSIPUG00000004248 dtd1 (ENSIPUG00000004266) chmp4ba (ENSIPUG00000004312) bin1b (ENSIPUG00000004347) nhej1 (ENSIPUG00000004365) ahcy-b (ENSIPUG00000004424) ENSIPUG00000004466 Nufip1 (ENSIPUG00000004479) ENSIPUG00000004500 ENSIPUG00000004507 wbp4 (ENSIPUG00000004525) IGFBP5 (ENSIPUG00000004559) Characiphysae_b ANCESTRAL SPECIES 147 ENSGT00530000063255.A ENSGT00940000155569.a.a ENSGT00390000001799 ENSGT00940000156300.k ENSGT00940000159809 ENSGT00940000167348 ENSGT00940000154663.b ENSGT00950000182981.a ENSGT00940000176173 ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00390000012445.a.b ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00390000014941 ENSGT00940000155326.b Characoidei ANCESTRAL SPECIES 220 ENSGT00530000063255.A ENSGT00940000155569.a.a ENSGT00390000001799 ENSGT00940000156300.k ENSGT00940000159809 ENSGT00940000167348 ENSGT00940000154663.b ENSGT00950000182981.a ENSGT00940000176173 ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00390000012445.a.b ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00390000014941 ENSGT00940000155326.b Red-bellied piranha MODERN SPECIES 140 STX16 (ENSPNAG00000012048) npepl1 (ENSPNAG00000002068) ctsz (ENSPNAG00000002052) nelfcd (ENSPNAG00000011979) GNAS (ENSPNAG00000002006) tubb1 (ENSPNAG00000005981) atp5f1e (ENSPNAG00000011892) chmp4ba (ENSPNAG00000011884) ahcy (ENSPNAG00000011857) ENSPNAG00000011837 eif2s2 (ENSPNAG00000011834) raly (ENSPNAG00000011812) cyc1 (ENSPNAG00000001935) ergic3 (ENSPNAG00000011779) romo1 (ENSPNAG00000011742) mych (ENSPNAG00000011731) ##22 mtss1 (ENSPNAG00000011711) ##11 osgn1 (ENSPNAG00000011608) pigu (ENSPNAG00000011592) Mexicana tetra MODERN SPECIES 4 ENSAMXG00000034650 eef1b2 (ENSAMXG00000030818) ENSAMXG00000030270 ndufs1 (ENSAMXG00000015335) ino80db (ENSAMXG00000038619) KCNJ3 (ENSAMXG00000015315) rprmb (ENSAMXG00000024814) arl6ip6 (ENSAMXG00000035122) ENSAMXG00000015213 ENSAMXG00000033300 asip1 (ENSAMXG00000032161) EIF2S2 (ENSAMXG00000040852) ENSAMXG00000030041 ergic3 (ENSAMXG00000009793) romo1 (ENSAMXG00000009812) mych (ENSAMXG00000034846) ##22 mtss1 (ENSAMXG00000039365) ##11 osgn1 (ENSAMXG00000037872) pigu (ENSAMXG00000009757) PTPRT (ENSAMXG00000009696) ENSAMXG00000037717 tomm34 (ENSAMXG00000041798) ywhaba (ENSAMXG00000016150) RIMS4 (ENSAMXG00000036926) ENSAMXG00000009662 ANGPT4 (ENSAMXG00000009654) rspo4 (ENSAMXG00000009643) psmf1 (ENSAMXG00000009630) TMEM74B (ENSAMXG00000025524) blcap (ENSAMXG00000025523) ripor3 (ENSAMXG00000009604) Electric eel MODERN SPECIES 158 APCDD1L (ENSEEEG00000017765) STX16 (ENSEEEG00000017766) npepl1 (ENSEEEG00000017768) ctsz (ENSEEEG00000017784) nelfcd (ENSEEEG00000017805) GNAS (ENSEEEG00000017935) tubb1 (ENSEEEG00000018888) atp5f1e (ENSEEEG00000018891) chmp4ba (ENSEEEG00000018896) ahcy (ENSEEEG00000018907) eif2s2 (ENSEEEG00000019016) raly (ENSEEEG00000019028) cyc1 (ENSEEEG00000019031) ergic3 (ENSEEEG00000019046) romo1 (ENSEEEG00000019055) mych (ENSEEEG00000019057) ##22 Cyprinoidei ANCESTRAL SPECIES 2 ENSGT00530000063255.A ENSGT01060000253505 ENSGT00940000155569.a.a ENSGT00390000001799 ENSGT00940000156300.k ENSGT00940000159809 ENSGT00940000167348 ENSGT00940000154663.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00390000012445.a.b ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00390000014941 ENSGT00940000155326.b ENSGT00750000118737.c ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00940000166055 ENSGT00940000158934 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 9 ENSGT00530000063255.A.h ENSGT01060000253505 ENSGT00940000155569.a.a.c ENSGT00390000001799.a ENSGT00940000156300.k.b ENSGT00940000159809.n ENSGT00940000167348.c ENSGT00940000154663.b.c ENSGT00950000182981.a.e ENSGT00940000154258.a.c.a ENSGT00390000001804.lb.b ENSGT00940000157601.hb ENSGT00390000012445.a.b.b ENSGT00390000005315.hb ENSGT00530000063113.B.d ENSGT00940000155285.a.a ##22 ENSGT00950000183156.a.b.b.b.b.b.j ##11 ENSGT00390000006658.a.a.b ENSGT00390000014941.l ENSGT00940000155326.b.a ENSGT00750000118737.c ENSGT00950000183202.a.a.i.a ENSGT00940000158986.d ENSGT00940000153717.a.b.g ENSGT00390000014105.e ENSGT00530000063880.a.b ENSGT00390000012257.j ENSGT00940000160937.a.b ENSGT00940000160129.a ENSGT00940000166055.a.a ENSGT00940000158934.d Goldfish MODERN SPECIES 46 APCDD1L (ENSCARG00000046205) STX16 (ENSCARG00000046161) npepl1 (ENSCARG00000045890) ctsz (ENSCARG00000045847) nelfcd (ENSCARG00000045759) tubb1 (ENSCARG00000045741) atp5f1e (ENSCARG00000045735) chmp4ba (ENSCARG00000045723) ahcy (ENSCARG00000044757) agouti (ENSCARG00000044701) eif2s2 (ENSCARG00000044651) raly (ENSCARG00000044633) cyc1 (ENSCARG00000044588) romo1 (ENSCARG00000044574) ergic3 (ENSCARG00000044431) mych (ENSCARG00000044406) ##22 mtss1 (ENSCARG00000044247) ##11 osgn1 (ENSCARG00000044228) pigu (ENSCARG00000044187) GCNT7 (ENSCARG00000044172) rtf2 (ENSCARG00000044134) eya2 (ENSCARG00000044104) cyp24a1 (ENSCARG00000043822) ENSCARG00000043783 ENSCARG00000039308 ncoa5 (ENSCARG00000038948) ctsa (ENSCARG00000038927) eya2 (ENSCARG00000035141) cyp24a1 (ENSCARG00000034823) ENSCARG00000033871 ncoa5 (ENSCARG00000033780) Cyprininae_a ANCESTRAL SPECIES 20 ENSGT00530000063255.A.h.a ENSGT01060000253505 ENSGT00530000063255.A.h.b ENSGT00940000155569.a.a.c ENSGT00390000001799.a ENSGT00940000156300.k.b ENSGT00940000159809.n ENSGT00940000154663.b.c ENSGT00950000182981.a.e ENSGT00940000154258.a.c.a ENSGT00390000001804.lb.b ENSGT00940000157601.hb ENSGT00390000012445.a.b.b ENSGT00390000005315.hb ENSGT00530000063113.B.d ENSGT00940000155285.a.a ##22 ENSGT00950000183156.a.b.b.b.b.b.j ##11 ENSGT00390000006658.a.a.b ENSGT00390000014941.l ENSGT00940000155326.b.a ENSGT00750000118737.c ENSGT00950000183202.a.a.i.a ENSGT00940000158986.d ENSGT00940000153717.a.b.g ENSGT00390000014105.e ENSGT00530000063880.a.b ENSGT00390000012257.j ENSGT00940000160937.a.a ENSGT00940000160129.a ENSGT00940000166055.a.a ENSGT00940000158934.d Common carp reference MODERN SPECIES 10 STX16 (ENSCCRG00000047693) npepl1 (ENSCCRG00000018532) ENSCCRG00000061980 ctsz (ENSCCRG00000065542) nelfcd (ENSCCRG00000018541) GNAS (ENSCCRG00000019359) tubb1 (ENSCCRG00000061932) chmp4ba (ENSCCRG00000082352) ahcy (ENSCCRG00000058463) asip1 (ENSCCRG00000059215) eif2s2 (ENSCCRG00000028096) raly (ENSCCRG00000023256) cyc1 (ENSCCRG00000055978) romo1 (ENSCCRG00000052982) ergic3 (ENSCCRG00000023159) mych (ENSCCRG00000057658) ##22 mtss1 (ENSCCRG00000059251) ##11 osgn1 (ENSCCRG00000078345) pigu (ENSCCRG00000040007) ENSCCRG00000028148 ENSCCRG00000054159 rbl1 (ENSCCRG00000011653) ENSCCRG00000069087 ripor3 (ENSCCRG00000005992) blcap (ENSCCRG00000082053) TMEM74B (ENSCCRG00000061692) psmf1 (ENSCCRG00000029029) rspo4 (ENSCCRG00000043457) ANGPT4 (ENSCCRG00000041490) ENSCCRG00000041472 ENSCCRG00000041458 Golden-line barbel MODERN SPECIES 222 STX16 (ENSSGRG00000037755) npepl1 (ENSSGRG00000037707) ctsz (ENSSGRG00000037700) nelfcd (ENSSGRG00000037638) GNAS (ENSSGRG00000036572) tubb1 (ENSSGRG00000036542) atp5f1e (ENSSGRG00000036541) chmp4ba (ENSSGRG00000036519) ahcy (ENSSGRG00000036438) asip1 (ENSSGRG00000036427) eif2s2 (ENSSGRG00000036418) raly (ENSSGRG00000036414) cyc1 (ENSSGRG00000036413) romo1 (ENSSGRG00000036410) ergic3 (ENSSGRG00000036177) mych (ENSSGRG00000036165) ##22 mtss1 (ENSSGRG00000036163) ##11 osgn1 (ENSSGRG00000036158) pigu (ENSSGRG00000036106) PTPRT (ENSSGRG00000035333) rbl1 (ENSSGRG00000035242) CHD6 (ENSSGRG00000033074) ripor3 (ENSSGRG00000033054) blcap (ENSSGRG00000033053) TMEM74B (ENSSGRG00000033052) psmf1 (ENSSGRG00000033051) rspo4 (ENSSGRG00000033050) Cyprininae ANCESTRAL SPECIES 90 ENSGT00940000155769.`b.b.b ENSGT00640000091492.b.c ENSGT01000000214440.B.i ENSGT00530000063255.A.g ENSGT00940000155569.a.a.d ENSGT00390000001799.b ENSGT00940000156300.k.a ENSGT00940000159809.m ENSGT00940000167348.d ENSGT00940000154663.b.d ENSGT00950000182981.a.f ENSGT00940000154258.a.c.b ENSGT00390000001804.lb.a ENSGT00940000157601.ib ENSGT00390000012445.a.b.a ENSGT00940000155285.a.b ##22 ENSGT00950000183156.a.b.b.b.b.b.i ##11 ENSGT00390000006658.a.a.a ENSGT00390000014941.k ENSGT00940000155326.b.b ENSGT00950000183202.a.a.i.b ENSGT00940000158986.c ENSGT00940000153717.a.b.h ENSGT00390000014105.f ENSGT00530000063880.a.a ENSGT00390000012257.i ENSGT00940000160937.b ENSGT00940000160129.b ENSGT00940000166055.b ENSGT00940000158934.c.b ENSGT01090000260040.b.a.b.`b.a Goldfish MODERN SPECIES 24 npepl1 (ENSCARG00000030171) ctsz (ENSCARG00000030152) nelfcd (ENSCARG00000029655) GNAS (ENSCARG00000029418) tubb1 (ENSCARG00000029373) atp5f1e (ENSCARG00000029362) chmp4ba (ENSCARG00000029353) ahcy (ENSCARG00000029046) asip1 (ENSCARG00000029010) eif2s2 (ENSCARG00000028983) ENSCARG00000028950 raly (ENSCARG00000028931) cyc1 (ENSCARG00000028862) romo1 (ENSCARG00000028846) ergic3 (ENSCARG00000028765) mych (ENSCARG00000028756) ##22 mtss1 (ENSCARG00000028731) ##11 osgn1 (ENSCARG00000028717) ENSCARG00000028713 pigu (ENSCARG00000028680) ripor3 (ENSCARG00000028663) TMEM74B (ENSCARG00000028658) psmf1 (ENSCARG00000028650) PTPRT (ENSCARG00000028357) CHD6 (ENSCARG00000026805) ripor3 (ENSCARG00000026643) blcap (ENSCARG00000026631) TMEM74B (ENSCARG00000026629) psmf1 (ENSCARG00000026623) rspo4 (ENSCARG00000026620) ANGPT4 (ENSCARG00000026612) Cyprininae_a ANCESTRAL SPECIES 68 ENSGT00940000155569.a.a.d ENSGT00390000001799.b ENSGT00940000156300.k.a ENSGT00940000159809.m ENSGT00940000167348.d ENSGT00940000154663.b.d.b ENSGT00940000167348.c ENSGT00940000154663.b.d.a ENSGT00950000182981.a.f ENSGT00940000154258.a.c.b ENSGT00390000001804.lb.a ENSGT00940000157601.ib ENSGT00390000012445.a.b.a ENSGT00530000063113.B.c ENSGT00390000005315.ib ENSGT00940000155285.a.b ##22 ENSGT00950000183156.a.b.b.b.b.b.i ##11 ENSGT00390000006658.a.a.a ENSGT00390000014941.k ENSGT00940000155326.b.b ENSGT00950000183202.a.a.i.b ENSGT00940000158986.c ENSGT00940000153717.a.b.h ENSGT00390000014105.f ENSGT00530000063880.a.a ENSGT00390000012257.i ENSGT00940000160937.b ENSGT00940000160129.b ENSGT00940000166055.b ENSGT00940000158934.c.a ENSGT01090000260040.b.a.b.`b.a Common carp reference MODERN SPECIES 16 APCDD1L (ENSCCRG00000043058) STX16 (ENSCCRG00000066207) npepl1 (ENSCCRG00000023034) ctsz (ENSCCRG00000018537) nelfcd (ENSCCRG00000023059) GNAS (ENSCCRG00000025190) tubb1 (ENSCCRG00000068457) chmp4ba (ENSCCRG00000056400) ahcy (ENSCCRG00000028089) asip1 (ENSCCRG00000059220) eif2s2 (ENSCCRG00000023473) raly (ENSCCRG00000022968) cyc1 (ENSCCRG00000055748) ergic3 (ENSCCRG00000075885) romo1 (ENSCCRG00000023210) mych (ENSCCRG00000067703) ##22 mtss1 (ENSCCRG00000028103) ##11 osgn1 (ENSCCRG00000028122) pigu (ENSCCRG00000028135) ENSCCRG00000069739 rbl1 (ENSCCRG00000011543) ENSCCRG00000011605 ripor3 (ENSCCRG00000029024) blcap (ENSCCRG00000056975) TMEM74B (ENSCCRG00000054999) psmf1 (ENSCCRG00000043452) rspo4 (ENSCCRG00000034445) ANGPT4 (ENSCCRG00000021432) ENSCCRG00000021422 ENSCCRG00000021420 ywhaba (ENSCCRG00000033122) Golden-line barbel MODERN SPECIES 492 STX16 (ENSSGRG00000044500) npepl1 (ENSSGRG00000044425) ctsz (ENSSGRG00000044420) ctsz (ENSSGRG00000044419) nelfcd (ENSSGRG00000044288) GNAS (ENSSGRG00000044096) tubb1 (ENSSGRG00000044091) atp5f1e (ENSSGRG00000044090) chmp4ba (ENSSGRG00000044089) ahcy (ENSSGRG00000043798) asip1 (ENSSGRG00000043787) eif2s2 (ENSSGRG00000043739) raly (ENSSGRG00000043734) cyc1 (ENSSGRG00000043712) ergic3 (ENSSGRG00000043526) mych (ENSSGRG00000043518) ##22 mtss1 (ENSSGRG00000043363) ##11 osgn1 (ENSSGRG00000043351) pigu (ENSSGRG00000043350) PTPRT (ENSSGRG00000042823) Zebrafish MODERN SPECIES 21 npepl1 (ENSDARG00000012871) ENSDARG00000095783 ctsz (ENSDARG00000043081) nelfcd (ENSDARG00000021097) GNAS (ENSDARG00000043094) tubb1 (ENSDARG00000053066) atp5f1e (ENSDARG00000095897) chmp4ba (ENSDARG00000016255) ahcy (ENSDARG00000005191) asip1 (ENSDARG00000077858) eif2s2 (ENSDARG00000053047) raly (ENSDARG00000059972) cyc1 (ENSDARG00000038075) ergic3 (ENSDARG00000038074) romo1 (ENSDARG00000038076) mych (ENSDARG00000077473) ##22 mtss1 (ENSDARG00000059604) ##11 osgn1 (ENSDARG00000052279) pigu (ENSDARG00000075530) PTPRT (ENSDARG00000097572) PTPRT (ENSDARG00000074781) ENSDARG00000097496 rbl1 (ENSDARG00000008141) ENSDARG00000017244 ripor3 (ENSDARG00000020979) blcap (ENSDARG00000052073) TMEM74B (ENSDARG00000078868) psmf1 (ENSDARG00000022652) rspo4 (ENSDARG00000038593) ANGPT4 (ENSDARG00000076787) ENSDARG00000038583 Euteleosteomorpha ANCESTRAL SPECIES 16 ENSGT00390000015137 ENSGT01050000244866.D.a ENSGT00390000018016 ENSGT00390000001912.f ENSGT00390000000724.c.a ENSGT00940000154459.A ENSGT00940000154663.a.b ENSGT00940000154663.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00390000012445.b ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00390000014941 ENSGT00940000155326.a.b ENSGT00940000155326.a.a ENSGT00950000183202.a.a ENSGT01040000241001 ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160129 ENSGT00940000166055 ENSGT00940000158934 Protacanthopterygii ANCESTRAL SPECIES 31 ENSGT00950000183066.a.b.a.b ENSGT00390000015137 ENSGT01050000244866.D.a ENSGT00390000018016 ENSGT00390000001912.f ENSGT00390000000724.c.a ENSGT00940000154459.A ENSGT00940000154663.b ENSGT00950000182981.a.c ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00390000012445.b ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00390000014941 ENSGT00940000155326.a.b ENSGT00940000155326.a.a ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160129 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.z Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 647 ENSGT00940000155326.a.b ENSGT00390000014941.i ENSGT00390000012445.b.a ENSGT00990000209029 ENSGT00530000063113.B.f ENSGT00940000155285.a.c ##22 ENSGT00950000183156.a.b.b.b.b.b.b ##11 ENSGT00940000157601.kb ENSGT00390000001804.ib.b ENSGT00940000154258.a.a ENSGT00950000182981.a.d ENSGT00940000154663.b.a ENSGT00940000154459.A.b ENSGT00390000000724.c.a.l Salmoninae_a ANCESTRAL SPECIES 25 ENSGT00940000160586 ENSGT00940000162210.c.b ENSGT00940000160611.k ENSGT00940000155740 ENSGT00940000156368.a ENSGT00940000154468.tb.a.d ENSGT00390000012257 ENSGT00530000063880.a.h ENSGT00390000014105.c ENSGT00940000158986.b ENSGT00940000155326.a.b ENSGT00390000014941.i ENSGT00390000012445.b.a ENSGT00990000209029 ENSGT00530000063113.B.f ENSGT00940000155285.a.c ##22 ENSGT00950000183156.a.b.b.b.b.b.b ##11 ENSGT00940000157601.kb ENSGT00390000001804.ib.b ENSGT00940000154258.a.a ENSGT00950000182981.a.d ENSGT00940000154663.b.a ENSGT00940000154459.A.b ENSGT00390000000724.c.a.l Salmo ANCESTRAL SPECIES 6 ENSGT00940000162210.c.b ENSGT00940000160611.k ENSGT00940000155740 ENSGT00940000156368.a ENSGT00940000154468.tb.a.d ENSGT00390000012257 ENSGT00530000063880.a.h ENSGT00390000014105.c ENSGT00940000158986.b ENSGT00940000155326.a.b ENSGT00390000014941.i ENSGT00390000012445.b.a ENSGT00390000005315.ob ENSGT00530000063113.B.f ENSGT00990000209029 ENSGT00940000155285.a.c ##22 ENSGT00950000183156.a.b.b.b.b.b.b ##11 ENSGT00940000157601.kb ENSGT00390000001804.ib.b ENSGT00940000154258.a.a ENSGT00950000182981.a.d ENSGT00940000154663.b.a ENSGT00390000000724.c.a.l River trout MODERN SPECIES 7 ENSSTUG00000035021 rbm12 (ENSSTUG00000035037) nfs1 (ENSSTUG00000035045) si:ch211-15p9.2 (ENSSTUG00000035098) rbm39a (ENSSTUG00000035109) psmf1 (ENSSTUG00000035183) TMEM74B (ENSSTUG00000035200) blcap (ENSSTUG00000035202) ENSSTUG00000035362 ENSSTUG00000039348 PTPRT (ENSSTUG00000039419) pigu (ENSSTUG00000042763) cyc1 (ENSSTUG00000043096) ergic3 (ENSSTUG00000043130) ENSSTUG00000043265 mych (ENSSTUG00000043273) ##22 mtss1 (ENSSTUG00000043288) ##11 raly (ENSSTUG00000043352) eif2s2 (ENSSTUG00000043377) asip1 (ENSSTUG00000043413) ahcy (ENSSTUG00000043424) CHMP4B (ENSSTUG00000043490) pmepa1 (ENSSTUG00000043510) ENSSTUG00000043530 ENSSTUG00000043542 Atlantic salmon MODERN SPECIES 14 nfs1 (ENSSSAG00000075223) ENSSSAG00000075221 ENSSSAG00000097060 ENSSSAG00000118923 rbm39a (ENSSSAG00000075148) psmf1 (ENSSSAG00000075129) ENSSSAG00000075114 BLCAP (ENSSSAG00000075111) ENSSSAG00000093956 ENSSSAG00000074202 ENSSSAG00000057316 pigu (ENSSSAG00000056469) ENSSSAG00000056376 romo1 (ENSSSAG00000106404) ergi3 (ENSSSAG00000056325) myc (ENSSSAG00000056319) ##22 mtss1 (ENSSSAG00000056272) ##11 RALY (ENSSSAG00000098255) IF2B (ENSSSAG00000056227) sahhb (ENSSSAG00000056009) ENSSSAG00000055995 ENSSSAG00000100998 Oncorhynchus ANCESTRAL SPECIES 5 ENSGT00940000160586 ENSGT00940000162210.c.b ENSGT00940000160611.k ENSGT00940000155740 ENSGT00940000156368.a ENSGT00940000154468.tb.a.d ENSGT00390000012257 ENSGT00530000063880.a.h ENSGT00390000014105.c ENSGT00940000158986.b ENSGT00940000155326.a.b ENSGT00390000014941.i ENSGT00390000012445.b.a ENSGT00990000209029 ENSGT00530000063113.B.f ENSGT00940000155285.a.c ##22 ENSGT00950000183156.a.b.b.b.b.b.b ##11 ENSGT00940000157601.kb ENSGT00390000001804.ib.b ENSGT00940000154258.a.a ENSGT00950000182981.a.d ENSGT00940000154663.b.a ENSGT00940000154459.A.b ENSGT00390000000724.c.a.l Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT00940000160586 ENSGT00940000162210.c.b ENSGT00940000160611.k ENSGT00940000155740 ENSGT00940000156368.a ENSGT00940000154468.tb.a.d ENSGT00390000012257 ENSGT00530000063880.a.h ENSGT00390000014105.c ENSGT00940000158986.b ENSGT00940000155326.a.b ENSGT00390000014941.i ENSGT00390000012445.b.a ENSGT00990000209029 ENSGT00530000063113.B.f ENSGT00940000155285.a.c ##22 ENSGT00950000183156.a.b.b.b.b.b.b ##11 ENSGT00390000001804.ib.b ENSGT00940000154258.a.a ENSGT00950000182981.a.d ENSGT00940000154663.b.a ENSGT00940000154459.A.b ENSGT00390000000724.c.a.l Chinook salmon MODERN SPECIES 31 rbm12 (ENSOTSG00005026193) nfs1 (ENSOTSG00005026192) si:ch211-15p9.2 (ENSOTSG00005026191) ENSOTSG00005026190 rbm39a (ENSOTSG00005026189) psmf1 (ENSOTSG00005026187) TMEM74B (ENSOTSG00005026186) blcap (ENSOTSG00005026185) ENSOTSG00005014963 ENSOTSG00005014907 PTPRT (ENSOTSG00005001265) pigu (ENSOTSG00005000915) CYC1 (ENSOTSG00005031226) ENSOTSG00005031224 ergic3 (ENSOTSG00005031159) mych (ENSOTSG00005031153) ##22 mtss1 (ENSOTSG00005031148) ##11 eif2s2 (ENSOTSG00005031142) asip1 (ENSOTSG00005031140) ahcy (ENSOTSG00005031132) ENSOTSG00005031129 ENSOTSG00005031128 pmepa1 (ENSOTSG00005031127) ENSOTSG00005031124 ENSOTSG00005031123 ENSOTSG00005031122 ENSOTSG00005031121 DCAF1 (ENSOTSG00005031120) PACS1 (ENSOTSG00005031032) ENSOTSG00005031023 prkd4 (ENSOTSG00005031021) Coho salmon MODERN SPECIES 25 ENSOKIG00005027833 cpne1 (ENSOKIG00005027718) rbm12 (ENSOKIG00005027708) nfs1 (ENSOKIG00005027582) si:ch211-15p9.2 (ENSOKIG00005027575) rbm39a (ENSOKIG00005027221) psmf1 (ENSOKIG00005027086) TMEM74B (ENSOKIG00005027059) blcap (ENSOKIG00005027047) ENSOKIG00005025102 PTPRT (ENSOKIG00005021496) pigu (ENSOKIG00005021178) cyc1 (ENSOKIG00005021130) ENSOKIG00005021092 ergic3 (ENSOKIG00005021038) mych (ENSOKIG00005021018) ##22 mtss1 (ENSOKIG00005020992) ##11 eif2s2 (ENSOKIG00005020930) asip1 (ENSOKIG00005020909) ahcy (ENSOKIG00005020588) ENSOKIG00005020540 ENSOKIG00005020529 ENSOKIG00005020524 pmepa1 (ENSOKIG00005020517) ENSOKIG00005020510 ENSOKIG00005020507 ENSOKIG00005020501 ENSOKIG00005020497 ENSOKIG00005020493 ENSOKIG00005020485 ENSOKIG00005020477 Rainbow trout MODERN SPECIES 28 ENSOMYG00000064934 rbm39a (ENSOMYG00000005663) ENSOMYG00000005289 ENSOMYG00000005261 ENSOMYG00000005184 ENSOMYG00000074305 bc10 (ENSOMYG00000005166) ENSOMYG00000004581 ENSOMYG00000003153 ENSOMYG00000058680 ENSOMYG00000002812 cyc1 (ENSOMYG00000002652) ENSOMYG00000075152 ENSOMYG00000002614 ergic3 (ENSOMYG00000002585) mych (ENSOMYG00000002483) ##22 mtss1 (ENSOMYG00000002417) ##11 raly (ENSOMYG00000002338) if2b (ENSOMYG00000002309) asip1 (ENSOMYG00000002279) ahcy (ENSOMYG00000002184) ENSOMYG00000002030 ENSOMYG00000063220 ENSOMYG00000055326 ENSOMYG00000001993 ENSOMYG00000001932 ENSOMYG00000056248 ENSOMYG00000001901 ENSOMYG00000076593 ENSOMYG00000077244 ENSOMYG00000068259 Huchen MODERN SPECIES 228 pigu (ENSHHUG00000036348) cyc1 (ENSHHUG00000036335) ENSHHUG00000036305 ergic3 (ENSHHUG00000036261) mych (ENSHHUG00000036253) ##22 mtss1 (ENSHHUG00000036211) ##11 ENSHHUG00000036209 raly (ENSHHUG00000036182) eif2s2 (ENSHHUG00000035998) ENSHHUG00000035990 ahcy (ENSHHUG00000035882) CHMP4B (ENSHHUG00000035863) ENSHHUG00000035855 ENSHHUG00000035851 Salmoninae ANCESTRAL SPECIES 20 ENSGT00940000157009.c.a ENSGT00950000183066.a.b.a.b.k ENSGT01050000244866.D.a.f ENSGT00390000018016 ENSGT00390000001912.f ENSGT00390000000724.c.a.k ENSGT00940000154459.A.a ENSGT00940000154663.b.b ENSGT00950000182981.a.c ENSGT00940000154258.a.b ENSGT00390000001804.ib.a ENSGT00940000157601.jb ENSGT00390000012445.b.b ENSGT00390000005315 ENSGT00530000063113.B.e ENSGT00940000155285.a.d ##22 ENSGT00950000183156.a.b.b.b.b.b.a ##11 ENSGT00390000006658.a.a ENSGT00390000014941.j ENSGT00940000155326.a.a.a ENSGT00950000183202.a.a ENSGT01040000241001 ENSGT00940000153649.A.z ENSGT00940000158986.a ENSGT00940000153717.a.b ENSGT00390000014105.d ENSGT00530000063880.a.g ENSGT00940000160129 ENSGT01090000260040.b.a.b.z.a ENSGT00940000154697.a.b.yb ENSGT00940000165514.h Salmoninae_a ANCESTRAL SPECIES 21 ENSGT00940000157009.c.a ENSGT00940000157009.d ENSGT00950000183066.a.b.a.b.k ENSGT00390000018016 ENSGT00390000001912.f ENSGT00390000000724.c.a.k ENSGT00940000154459.A.a ENSGT00940000154663.b.b ENSGT00950000182981.a.c ENSGT00940000154258.a.b ENSGT00390000001804.ib.a ENSGT00940000157601.jb ENSGT00390000012445.b.b ENSGT00390000005315 ENSGT00530000063113.B.e ENSGT00940000155285.a.d ##22 ENSGT00950000183156.a.b.b.b.b.b.a ##11 ENSGT00390000006658.a.a ENSGT00390000014941.j ENSGT00940000155326.a.a.a ENSGT00950000183202.a.a ENSGT00940000158986.a ENSGT00940000153717.a.b ENSGT00390000014105.d ENSGT00530000063880.a.g ENSGT00940000160129 ENSGT01090000260040.b.a.b.z.a ENSGT00940000154697.a.b.yb ENSGT00940000165514.h ENSGT00390000005197.b ENSGT00940000157086.b.i Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00940000155769.`b.b.d ENSGT00940000157009.d ENSGT00950000183066.a.b.a.b.k ENSGT00390000018016 ENSGT00390000001912.f ENSGT00390000000724.c.a.k ENSGT00940000154459.A.a ENSGT00940000154663.b.b ENSGT00950000182981.a.c ENSGT00940000154258.a.b ENSGT00390000001804.ib.a ENSGT00940000157601.jb ENSGT00390000012445.b.b ENSGT00390000005315 ENSGT00530000063113.B.e ENSGT00940000155285.a.d ##22 ENSGT00950000183156.a.b.b.b.b.b.a ##11 ENSGT00390000006658.a.a ENSGT00390000014941.j ENSGT00940000155326.a.a.b ENSGT00950000183202.a.a ENSGT00940000158986.a ENSGT00940000153717.a.b ENSGT00390000014105.d ENSGT00530000063880.a.g ENSGT00940000160129 ENSGT01090000260040.b.a.b.z.a ENSGT00940000154697.a.b.yb ENSGT00940000165514.h ENSGT00390000005197.b ENSGT00940000157086.b.i Rainbow trout MODERN SPECIES 8 ENSOMYG00000061450 ENSOMYG00000041518 ENSOMYG00000025195 ENSOMYG00000057424 ENSOMYG00000049148 pmepa1 (ENSOMYG00000041506) ENSOMYG00000041491 ahcy (ENSOMYG00000065868) asip1 (ENSOMYG00000041479) eif2s2 (ENSOMYG00000041465) raly (ENSOMYG00000041456) cyc1 (ENSOMYG00000041436) romo1 (ENSOMYG00000041428) ergic3 (ENSOMYG00000041364) ENSOMYG00000077126 mych (ENSOMYG00000041344) ##22 ENSOMYG00000050012 mtss1 (ENSOMYG00000041342) ##11 osgn1 (ENSOMYG00000041337) pigu (ENSOMYG00000041333) ENSOMYG00000073883 ENSOMYG00000024478 ENSOMYG00000074895 ENSOMYG00000021751 rbl1 (ENSOMYG00000068667) ENSOMYG00000021012 ENSOMYG00000072181 ENSOMYG00000052627 ENSOMYG00000048068 ripor3 (ENSOMYG00000020701) blcap (ENSOMYG00000020671) Oncorhynchus_a ANCESTRAL SPECIES 3 ENSGT00940000155769.`b.b.d ENSGT00940000157009.d ENSGT00950000183066.a.b.a.b.k ENSGT00390000018016 ENSGT00390000001912.f ENSGT00390000000724.c.a.k ENSGT00940000154459.A.a ENSGT00940000154663.b.b ENSGT00950000182981.a.c ENSGT00940000154258.a.b ENSGT00390000001804.ib.a ENSGT00940000157601.jb ENSGT00390000012445.b.b ENSGT00390000005315 ENSGT00530000063113.B.e ENSGT00940000155285.a.d ##22 ENSGT00950000183156.a.b.b.b.b.b.a ##11 ENSGT00390000006658.a.a ENSGT00940000155326.a.a.b ENSGT00950000183202.a.a ENSGT00940000158986.a ENSGT00940000153717.a.b ENSGT00390000014105.d ENSGT00530000063880.a.g ENSGT00940000160129 ENSGT01090000260040.b.a.b.z.a ENSGT00940000154697.a.b.yb ENSGT00940000165514.h ENSGT00390000005197.b ENSGT00940000157086.b.i ENSGT00940000161337.a.a.b.a Coho salmon MODERN SPECIES vapb (ENSOKIG00005005491) ENSOKIG00005005545 ENSOKIG00005005563 ENSOKIG00005005607 ccndbp1 (ENSOKIG00005005966) pck1 (ENSOKIG00005005980) pmepa1 (ENSOKIG00005005993) C20orf85 (ENSOKIG00005006006) ENSOKIG00005006018 ahcy (ENSOKIG00005006040) asip1 (ENSOKIG00005006079) eif2s2 (ENSOKIG00005006105) raly (ENSOKIG00005006190) ergic3 (ENSOKIG00005006265) romo1 (ENSOKIG00005006412) mych (ENSOKIG00005006426) ##22 mtss1 (ENSOKIG00005006437) ##11 osgn1 (ENSOKIG00005006448) PTPRT (ENSOKIG00005006771) rbl1 (ENSOKIG00005014566) ENSOKIG00005015015 ripor3 (ENSOKIG00005015600) blcap (ENSOKIG00005015645) TMEM74B (ENSOKIG00005015652) ENSOKIG00005015659 YWHAB (ENSOKIG00005015674) ENSOKIG00005015707 cox6c (ENSOKIG00005015724) RBPJL (ENSOKIG00005015736) MATN4 (ENSOKIG00005015783) ENSOKIG00005015794 Chinook salmon MODERN SPECIES 11 ENSOTSG00005031468 vapb (ENSOTSG00005031466) RAB22A (ENSOTSG00005031465) ENSOTSG00005027691 ccndbp1 (ENSOTSG00005027685) pck1 (ENSOTSG00005027684) pmepa1 (ENSOTSG00005027683) ENSOTSG00005027681 ahcy (ENSOTSG00005027675) asip1 (ENSOTSG00005027674) eif2s2 (ENSOTSG00005027671) raly (ENSOTSG00005027669) CYC1 (ENSOTSG00005027652) romo1 (ENSOTSG00005027649) ergic3 (ENSOTSG00005027645) mych (ENSOTSG00005027643) ##22 mtss1 (ENSOTSG00005027638) ##11 osgn1 (ENSOTSG00005027633) ENSOTSG00005027631 rbl1 (ENSOTSG00005026780) ENSOTSG00005026298 ripor3 (ENSOTSG00005026267) blcap (ENSOTSG00005026263) TMEM74B (ENSOTSG00005026262) ANGPT4 (ENSOTSG00005026261) YWHAB (ENSOTSG00005026259) tomm34 (ENSOTSG00005026258) cox6c (ENSOTSG00005026256) RBPJL (ENSOTSG00005026252) matn4 (ENSOTSG00005026248) ENSOTSG00005026245 Salmo ANCESTRAL SPECIES 62 ENSGT00940000155769.`b.b.d ENSGT00940000157009.c.a ENSGT00950000183066.a.b.a.b.k ENSGT00390000018016 ENSGT00390000001912.f ENSGT00390000000724.c.a.k ENSGT00940000154459.A.a ENSGT00940000154663.b.b ENSGT00950000182981.a.c ENSGT00940000154258.a.b ENSGT00390000001804.ib.a ENSGT00940000157601.jb ENSGT00390000012445.b.b ENSGT00390000005315.nb ENSGT00530000063113.B.e ENSGT00940000155285.a.d ##22 ENSGT00950000183156.a.b.b.b.b.b.a ##11 ENSGT00390000006658.a.a ENSGT00390000014941.j ENSGT00940000155326.a.a.a ENSGT00950000183202.a.a ENSGT00940000158986.a ENSGT00940000153717.a.b ENSGT00390000014105.d ENSGT00530000063880.a.g ENSGT00940000160129 ENSGT01090000260040.b.a.b.z.a ENSGT00940000154697.a.b.yb ENSGT00940000165514.h ENSGT00390000005197.b ENSGT00940000157086.b.i River trout MODERN SPECIES 5 ENSSTUG00000014613 ENSSTUG00000014621 ENSSTUG00000014652 ccndbp1 (ENSSTUG00000015058) pck1 (ENSSTUG00000015080) pmepa1 (ENSSTUG00000015088) C20orf85 (ENSSTUG00000015100) ENSSTUG00000015106 ahcy (ENSSTUG00000015132) asip1 (ENSSTUG00000015358) eif2s2 (ENSSTUG00000015366) raly (ENSSTUG00000015445) cyc1 (ENSSTUG00000015473) ergic3 (ENSSTUG00000015570) romo1 (ENSSTUG00000015717) mych (ENSSTUG00000015740) ##22 mtss1 (ENSSTUG00000015755) ##11 osgn1 (ENSSTUG00000015785) pigu (ENSSTUG00000015794) PTPRT (ENSSTUG00000016288) rbl1 (ENSSTUG00000025860) ENSSTUG00000026904 ripor3 (ENSSTUG00000027974) blcap (ENSSTUG00000028133) TMEM74B (ENSSTUG00000028149) ENSSTUG00000028161 ENSSTUG00000028182 YWHAB (ENSSTUG00000028213) tomm34 (ENSSTUG00000028244) cox6c (ENSSTUG00000028253) RBPJL (ENSSTUG00000028267) Atlantic salmon MODERN SPECIES 3 ccndbp1 (ENSSSAG00000076248) pck1 (ENSSSAG00000076245) ENSSSAG00000111529 pmepa1 (ENSSSAG00000118624) C20orf85 (ENSSSAG00000081880) ENSSSAG00000076234 ahcy (ENSSSAG00000076225) ENSSSAG00000076221 ENSSSAG00000076191 ENSSSAG00000101795 raly (ENSSSAG00000076169) ENSSSAG00000084448 ENSSSAG00000076153 romo1 (ENSSSAG00000076148) ergic3 (ENSSSAG00000075769) mych (ENSSSAG00000113418) ##22 mtss1 (ENSSSAG00000075740) ##11 osgn1 (ENSSSAG00000088836) pigu (ENSSSAG00000096653) ENSSSAG00000010098 ENSSSAG00000067053 rbl1 (ENSSSAG00000064675) ENSSSAG00000064285 fam65c (ENSSSAG00000064240) blcap (ENSSSAG00000085147) ENSSSAG00000101054 ENSSSAG00000085419 ENSSSAG00000064206 ENSSSAG00000064193 OM34 (ENSSSAG00000064189) cox6c (ENSSSAG00000064179) Huchen MODERN SPECIES 2013 cyc1 (ENSHHUG00000023784) ergic3 (ENSHHUG00000023802) romo1 (ENSHHUG00000023913) mych (ENSHHUG00000023920) ##22 Northern pike MODERN SPECIES 16 ENSELUG00000010867 pck1 (ENSELUG00000010883) pmepa1 (ENSELUG00000010900) ENSELUG00000032285 ENSELUG00000010915 C20orf85 (ENSELUG00000010924) CHMP4B (ENSELUG00000010948) ahcy (ENSELUG00000010991) asip1 (ENSELUG00000029218) eif2s2 (ENSELUG00000011070) raly (ENSELUG00000011138) ENSELUG00000031725 cyc1 (ENSELUG00000018628) ergic3 (ENSELUG00000018723) romo1 (ENSELUG00000018649) mych (ENSELUG00000018744) ##22 mtss1 (ENSELUG00000018786) ##11 osgn1 (ENSELUG00000000804) pigu (ENSELUG00000018876) PTPRT (ENSELUG00000019165) ENSELUG00000032882 ENSELUG00000029285 ENSELUG00000032675 rbl1 (ENSELUG00000012215) ENSELUG00000012309 ripor3 (ENSELUG00000004550) blcap (ENSELUG00000004454) TMEM74B (ENSELUG00000004447) psmf1 (ENSELUG00000021015) ENSELUG00000033721 ENSELUG00000020959 Acanthomorphata ANCESTRAL SPECIES 71 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000176933 ENSGT00940000160455 ENSGT00390000018118 ENSGT00940000160254 ENSGT00940000158315 ENSGT00390000015972 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000176173 ENSGT00940000157601 ENSGT00390000012445.b ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000176379 ENSGT00390000005874.j ENSGT00940000155514.c ENSGT00390000005197.b ENSGT00940000157086.b ENSGT00940000161337.a.a.b.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.b.b Euacanthomorphacea ANCESTRAL SPECIES 82 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000176933 ENSGT00940000160455 ENSGT00390000018118 ENSGT00940000160254 ENSGT00940000158315 ENSGT00390000015972 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000168313 ENSGT00940000166028 ENSGT00950000182846.a.a.b.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 Percomorphaceae ANCESTRAL SPECIES 33 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c ENSGT00390000018016 ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00940000177309 ENSGT00940000154459.A ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000176379 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00940000156624 ENSGT00940000156669.b ENSGT00940000158385 ENSGT00530000063735.a.b ENSGT00390000012411 ENSGT00940000157802 ENSGT00390000003721.d.a.h Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 280 RPL22 (ENSHCOG00000014322) zpr1 (ENSHCOG00000014326) RNF207 (ENSHCOG00000014352) agtrap (ENSHCOG00000014358) draxina (ENSHCOG00000014369) PANK4 (ENSHCOG00000014406) ENSHCOG00000000402 ENSHCOG00000014432 ENSHCOG00000014443 trib3 (ENSHCOG00000014449) ##16 pnp4a (ENSHCOG00000014467) b9d2 (ENSHCOG00000014477) romo1 (ENSHCOG00000014487) ergic3 (ENSHCOG00000014539) mych (ENSHCOG00000014562) ##22 mych (ENSHCOG00000014572) ##22 ENSHCOG00000014587 ##11 osgn1 (ENSHCOG00000014601) ccdc51 (ENSHCOG00000014623) ENSHCOG00000014633 dnase1l4.1 (ENSHCOG00000014712) ENSHCOG00000014820 slmapa (ENSHCOG00000014955) dennd6aa (ENSHCOG00000015021) ENSHCOG00000015048 ENSHCOG00000015126 ENSHCOG00000015139 appl1 (ENSHCOG00000015196) il17rd (ENSHCOG00000015210) arhgef3 (ENSHCOG00000015244) ENSHCOG00000015253 Tiger tail seahorse MODERN SPECIES 280 arhgef3 (ENSHCOG00000015244) il17rd (ENSHCOG00000015210) appl1 (ENSHCOG00000015196) ENSHCOG00000015139 ENSHCOG00000015126 ENSHCOG00000015048 dennd6aa (ENSHCOG00000015021) slmapa (ENSHCOG00000014955) ENSHCOG00000014820 dnase1l4.1 (ENSHCOG00000014712) ENSHCOG00000014633 ccdc51 (ENSHCOG00000014623) osgn1 (ENSHCOG00000014601) ENSHCOG00000014587 ##11 mych (ENSHCOG00000014572) ##22 mych (ENSHCOG00000014562) ##22 ergic3 (ENSHCOG00000014539) romo1 (ENSHCOG00000014487) b9d2 (ENSHCOG00000014477) pnp4a (ENSHCOG00000014467) trib3 (ENSHCOG00000014449) ##16 ENSHCOG00000014443 ENSHCOG00000014432 ENSHCOG00000000402 PANK4 (ENSHCOG00000014406) draxina (ENSHCOG00000014369) agtrap (ENSHCOG00000014358) RNF207 (ENSHCOG00000014352) zpr1 (ENSHCOG00000014326) RPL22 (ENSHCOG00000014322) ENSHCOG00000014308 Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000168313 ENSGT00940000166028 ENSGT00950000182846.a.a.b.b.a ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.a.b ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000168313 ENSGT00950000182846.a.a.b.b.a ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00530000066252 ENSGT00940000165432 Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000154459.A ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000168313 ENSGT00950000182846.a.a.b.b.a ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00530000066252 ENSGT00940000165432 Anabantaria ANCESTRAL SPECIES ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000154459.A ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000168313 ENSGT00950000182846.a.a.b.b.a ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.a.b ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00530000066252 Anabantoidei ANCESTRAL SPECIES 1 ENSGT01050000244866.D.a.c ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000168313 ENSGT00950000182846.a.a.b.b.a ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.a.b ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00530000066252 Siamese fighting fish MODERN SPECIES 16 tomm34 (ENSBSLG00000009918) ENSBSLG00000009854 ccndbp1 (ENSBSLG00000009761) pmepa1 (ENSBSLG00000009707) pck1 (ENSBSLG00000009455) ENSBSLG00000009442 ENSBSLG00000009432 ahcy (ENSBSLG00000009049) ENSBSLG00000008988 raly (ENSBSLG00000008935) ENSBSLG00000008496 cyc1 (ENSBSLG00000008479) ENSBSLG00000008458 romo1 (ENSBSLG00000008448) ergic3 (ENSBSLG00000008305) mych (ENSBSLG00000004737) ##22 mtss1 (ENSBSLG00000004406) ##11 ENSBSLG00000004399 osgn1 (ENSBSLG00000004393) ccdc51 (ENSBSLG00000004392) dnase1l4.1 (ENSBSLG00000004387) ENSBSLG00000004382 ENSBSLG00000004381 C1QA (ENSBSLG00000004380) ENSBSLG00000004376 C1QB (ENSBSLG00000004373) ENSBSLG00000004370 FLNB (ENSBSLG00000003897) slmapa (ENSBSLG00000003367) dennd6aa (ENSBSLG00000003345) ENSBSLG00000003329 Carangaria ANCESTRAL SPECIES 3 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c ENSGT00390000018016 ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00940000156780 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00970000193381.a.b.b.c.b.a.b.b ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000166028 ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00530000066252 ENSGT00940000165432 ENSGT00940000156624 ENSGT00940000154664.h.m.a ENSGT00940000156669.b ENSGT00940000158385 ENSGT00530000063735.a.b Carangaria_A ANCESTRAL SPECIES ENSGT00940000155285.a ##22 Barramundi perch MODERN SPECIES 579 ENSLCAG00010023066 ergic3 (ENSLCAG00010023075) romo1 (ENSLCAG00010023081) mych (ENSLCAG00010023082) ##22 ENSLCAG00010023085 ENSLCAG00010023087 Pleuronectoidei ANCESTRAL SPECIES 31 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT01050000244866.D.a.c ENSGT00390000018016 ENSGT00390000000724.c.a ENSGT00390000003024 ENSGT00390000001912.f ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00940000156780 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000163727 ENSGT00940000164287 ENSGT00950000182846.a.a.b.b.a ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000180684 ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00530000066252 ENSGT00940000165432 ENSGT00940000156624 Tongue sole MODERN SPECIES 2 rab22a (ENSCSEG00000019797) vapb (ENSCSEG00000019802) APCDD1L (ENSCSEG00000019818) SRC (ENSCSEG00000019825) manbal (ENSCSEG00000019841) ENSCSEG00000019842 cyp24a1 (ENSCSEG00000019846) ENSCSEG00000019854 ENSCSEG00000019861 MMP24 (ENSCSEG00000019898) eif6 (ENSCSEG00000019905) map1lc3a (ENSCSEG00000019914) dynlrb2 (ENSCSEG00000019920) ergic3 (ENSCSEG00000019923) romo1 (ENSCSEG00000019934) mych (ENSCSEG00000019936) ##22 ENSCSEG00000019937 RBPJL (ENSCSEG00000019940) matn4 (ENSCSEG00000019948) ENSCSEG00000019961 ENSCSEG00000019965 ENSCSEG00000019981 ENSCSEG00000019984 ENSCSEG00000019992 ENSCSEG00000020005 ENSCSEG00000020007 ENSCSEG00000020011 or90a1 (ENSCSEG00000020015) ENSCSEG00000020019 ENSCSEG00000020042 ENSCSEG00000020047 Turbot MODERN SPECIES 18 ENSSMAG00000001283 ENSSMAG00000001234 ENSSMAG00000001221 ENSSMAG00000033180 ENSSMAG00000001211 ENSSMAG00000001196 ENSSMAG00000001174 ahcy (ENSSMAG00000001148) ENSSMAG00000001134 raly (ENSSMAG00000001107) ENSSMAG00000037016 cyc1 (ENSSMAG00000002094) ENSSMAG00000002115 ergic3 (ENSSMAG00000002145) romo1 (ENSSMAG00000002225) mych (ENSSMAG00000024502) ##22 ENSSMAG00000023981 ENSSMAG00000034651 mtss1 (ENSSMAG00000002248) ##11 ENSSMAG00000002565 osgn1 (ENSSMAG00000030779) ENSSMAG00000026112 ENSSMAG00000003190 ENSSMAG00000003134 ENSSMAG00000026469 ENSSMAG00000024268 ENSSMAG00000003109 ENSSMAG00000003102 FLNB (ENSSMAG00000003015) ENSSMAG00000002633 dennd6aa (ENSSMAG00000002531) Eupercaria ANCESTRAL SPECIES ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000168313 ENSGT00940000166028 ENSGT00950000182846.a.a.b.b.a ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000159828.a ENSGT00940000161091 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a Eupecaria_A ANCESTRAL SPECIES ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000168313 ENSGT00950000182846.a.a.b.b.a ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000159828.a ENSGT00940000161091 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00530000066252 Ballan wrasse MODERN SPECIES 427 ergic3 (ENSLBEG00000011311) romo1 (ENSLBEG00000011429) mych (ENSLBEG00000011440) ##22 ENSLBEG00000011467 mtss1 (ENSLBEG00000011502) ##11 ENSLBEG00000011570 ENSLBEG00000011584 osgn1 (ENSLBEG00000011599) ccdc51 (ENSLBEG00000011626) ENSLBEG00000011641 dnase1l4.1 (ENSLBEG00000011659) ENSLBEG00000011681 C1QA (ENSLBEG00000011698) ENSLBEG00000011743 C1QB (ENSLBEG00000011771) ENSLBEG00000011783 ENSLBEG00000011806 FLNB (ENSLBEG00000011846) Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000166028 ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00530000066252 ENSGT00940000165432 ENSGT00940000156624 Eupecaria_C ANCESTRAL SPECIES ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000166028 ENSGT00950000182846.a.a.b.b.a ENSGT00970000193381.a.b.a.b.a.b.a.a.b.a ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00530000066252 Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00730000111645.a ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.b.b ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000171889 ENSGT00950000182846.a.a.b.b.a ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00530000066252 ENSGT00940000165432 Large yellow croaker MODERN SPECIES 478 ENSLCRG00005000819 khk (ENSLCRG00005000678) pltp (ENSLCRG00005000600) ddx27 (ENSLCRG00005000333) ENSLCRG00005000255 raly (ENSLCRG00005000247) ENSLCRG00005000240 ENSLCRG00005000235 ENSLCRG00005000230 ENSLCRG00005000225 ENSLCRG00005000219 cyc1 (ENSLCRG00005000198) ENSLCRG00005000180 romo1 (ENSLCRG00005000171) ergic3 (ENSLCRG00005000150) mych (ENSLCRG00005000129) ##22 ENSLCRG00005000121 dnase1l4.1 (ENSLCRG00005000103) ENSLCRG00005007235 ccdc51 (ENSLCRG00005007232) osgn1 (ENSLCRG00005007229) ENSLCRG00005007227 mtss1 (ENSLCRG00005007207) ##11 ENSLCRG00005007203 c1qa (ENSLCRG00005007202) ENSLCRG00005007201 c1qb (ENSLCRG00005007200) ENSLCRG00005007197 cox6c (ENSLCRG00005007196) ENSLCRG00005007178 KCNS1 (ENSLCRG00005007175) European seabass MODERN SPECIES 10 ENSDLAG00005010480 ENSDLAG00005034149 ENSDLAG00005010440 ENSDLAG00005010433 ENSDLAG00005010423 ENSDLAG00005031953 ENSDLAG00005010136 ENSDLAG00005010106 raly (ENSDLAG00005010100) ENSDLAG00005028076 cyc1 (ENSDLAG00005010064) ENSDLAG00005010060 ENSDLAG00005010052 romo1 (ENSDLAG00005010043) ergic3 (ENSDLAG00005010008) mych (ENSDLAG00005010002) ##22 mtss1 (ENSDLAG00005009956) ##11 ENSDLAG00005031605 ENSDLAG00005009950 ENSDLAG00005009948 osgn1 (ENSDLAG00005009943) ENSDLAG00005029800 ENSDLAG00005009937 ENSDLAG00005028571 ENSDLAG00005009916 ENSDLAG00005009912 ENSDLAG00005009911 C1QA (ENSDLAG00005009904) ENSDLAG00005009896 C1QB (ENSDLAG00005009881) ENSDLAG00005009870 Perciformes ANCESTRAL SPECIES ENSGT01050000244866.D.a.c ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000171889 ENSGT00940000161227 ENSGT00940000162143 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00530000066252 ENSGT00940000165432 ENSGT00940000156624 ENSGT00940000154664.h.m.a ENSGT00940000156669.b Perciformes_a ANCESTRAL SPECIES 5 ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000154459.A ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000171889 ENSGT00950000182846.a.a.b.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00530000066252 ENSGT00940000165432 ENSGT00940000156624 ENSGT00940000154664.h.m.a Pike perch MODERN SPECIES 134 ENSSLUG00000019587 stab1 (ENSSLUG00000019582) ccdc71 (ENSSLUG00000019578) ENSSLUG00000019571 pdhb (ENSSLUG00000019321) ENSSLUG00000019241 pxk (ENSSLUG00000019174) HTD2 (ENSSLUG00000019158) rpp14 (ENSSLUG00000019151) ABHD6 (ENSSLUG00000019134) lmcd1 (ENSSLUG00000019127) ENSSLUG00000019124 cyc1 (ENSSLUG00000019118) romo1 (ENSSLUG00000019116) ergic3 (ENSSLUG00000019109) mych (ENSSLUG00000019107) ##22 ENSSLUG00000019104 ENSSLUG00000019050 ENSSLUG00000018626 tomm34 (ENSSLUG00000018601) YWHAB (ENSSLUG00000018564) ENSSLUG00000018552 RIMS4 (ENSSLUG00000018541) LSM3 (ENSSLUG00000018491) Channel bull blenny MODERN SPECIES 19 ENSCGOG00000021793 ahcy (ENSCGOG00000021799) GJB1 (ENSCGOG00000021824) ENSCGOG00000021825 ENSCGOG00000021827 ENSCGOG00000021829 ENSCGOG00000021831 ENSCGOG00000021832 raly (ENSCGOG00000000462) ENSCGOG00000000473 cyc1 (ENSCGOG00000000500) ENSCGOG00000000523 ENSCGOG00000000526 ergic3 (ENSCGOG00000000616) romo1 (ENSCGOG00000000847) mych (ENSCGOG00000000848) ##22 ENSCGOG00000000850 ##11 osgn1 (ENSCGOG00000000852) ccdc51 (ENSCGOG00000000855) ENSCGOG00000000856 dnase1l4.1 (ENSCGOG00000000858) ENSCGOG00000000865 ENSCGOG00000000866 ENSCGOG00000000868 ENSCGOG00000000870 rbl1 (ENSCGOG00000000899) ENSCGOG00000001122 ENSCGOG00000001205 cand2 (ENSCGOG00000001206) ENSCGOG00000001208 ANGPT4 (ENSCGOG00000001212) Tetraodontidae ANCESTRAL SPECIES 253 ENSGT00390000012445.b ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 Fugu DUPLICATION Fugu MODERN SPECIES 10 ENSTRUG00000028902 ENSTRUG00000028204 ENSTRUG00000032349 ENSTRUG00000029223 appl1 (ENSTRUG00000002541) il17rd (ENSTRUG00000031264) ENSTRUG00000032331 ENSTRUG00000026389 ENSTRUG00000032464 ENSTRUG00000026658 ENSTRUG00000033101 ENSTRUG00000030796 cyc1 (ENSTRUG00000000092) romo1 (ENSTRUG00000033428) ergic3 (ENSTRUG00000032324) mych (ENSTRUG00000028610) ##22 ENSTRUG00000027775 ENSTRUG00000032186 ENSTRUG00000032420 ENSTRUG00000031498 ENSTRUG00000028829 Fugu MODERN SPECIES 10 ENSTRUG00000029223 ENSTRUG00000032349 ENSTRUG00000028204 ENSTRUG00000028902 ENSTRUG00000031297 ENSTRUG00000028083 ENSTRUG00000032767 il17rd (ENSTRUG00000031666) arhgef3 (ENSTRUG00000030584) ENSTRUG00000030150 ENSTRUG00000004385 ENSTRUG00000027608 cyc1 (ENSTRUG00000031894) ergic3 (ENSTRUG00000000094) romo1 (ENSTRUG00000027501) mych (ENSTRUG00000023968) ##22 ENSTRUG00000026230 mtss1 (ENSTRUG00000032401) ##11 osgn1 (ENSTRUG00000013006) ccdc51 (ENSTRUG00000031222) tma7 (ENSTRUG00000012969) dnase1l4.1 (ENSTRUG00000012884) ENSTRUG00000012869 ENSTRUG00000025555 ENSTRUG00000022156 ENSTRUG00000021583 ENSTRUG00000020276 IP6K1 (ENSTRUG00000026515) ENSTRUG00000031648 ENSTRUG00000027111 ENSTRUG00000030015 Tetraodon MODERN SPECIES 26 ENSTNIG00000000512 barx1 (ENSTNIG00000006722) phf2 (ENSTNIG00000006721) cstf1 (ENSTNIG00000006720) cstf1 (ENSTNIG00000002464) ENSTNIG00000006731 ENSTNIG00000002427 pxk (ENSTNIG00000006730) pdhb (ENSTNIG00000006729) ENSTNIG00000006573 ahcy (ENSTNIG00000006572) ENSTNIG00000001575 cyc1 (ENSTNIG00000006571) ENSTNIG00000000083 ergic3 (ENSTNIG00000006570) mych (ENSTNIG00000006569) ##22 ENSTNIG00000006568 mtss1 (ENSTNIG00000006567) ##11 osgn1 (ENSTNIG00000006566) osgn1 (ENSTNIG00000006565) ccdc51 (ENSTNIG00000002051) ENSTNIG00000006564 dnase1l4.1 (ENSTNIG00000006563) ENSTNIG00000006562 C1QA (ENSTNIG00000006561) ENSTNIG00000006560 C1QB (ENSTNIG00000000825) FLNB (ENSTNIG00000006559) slmapa (ENSTNIG00000006558) ENSTNIG00000004431 necap1 (ENSTNIG00000004430) Ovalentaria ANCESTRAL SPECIES 2 ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000176173 ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.b ENSGT00940000154258.a ENSGT00940000157601 ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000168313 ENSGT00940000166028 ENSGT00950000182846.a.a.b.b.a ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.a.b ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a Ovalentaria_B ANCESTRAL SPECIES 5 ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a.b ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000168313 ENSGT00940000166028 ENSGT00950000182846.a.a.b.b.a ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 ENSGT00390000003224.A Cichlidae ANCESTRAL SPECIES 1 ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a.b ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000003224.A ENSGT00940000161227 ENSGT00940000162143 ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00970000193381.a.b.a.b.a.b.b ENSGT00950000182846.a.a.b.b.a ENSGT00940000166028 ENSGT00940000168313 ENSGT00940000164287 ENSGT00390000006658.a.a ENSGT00970000193381.a.b.a.b.a.b.a.a.b.b.a.b ENSGT00970000193381.a.b.a.b.a.b.a.a.b.b.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a.b ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000003224.A ENSGT00940000161227 ENSGT00940000162143 ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00970000193381.a.b.a.b.a.b.b ENSGT00950000182846.a.a.b.b.a ENSGT00940000168313 ENSGT00940000164287 ENSGT00390000006658.a.a ENSGT00970000193381.a.b.a.b.a.b.a.a.b.b.a.b ENSGT00970000193381.a.b.a.b.a.b.a.a.b.b.a.a ENSGT00940000156286.eb ENSGT00940000157660 ENSGT00390000005529.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a.b ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b.i ENSGT00950000183127.c.b.d.a.a.a.b.j ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000003224.A ENSGT00940000161227 ENSGT00940000162143 ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00970000193381.a.b.a.b.a.b.b ENSGT00950000182846.a.a.b.b.a ENSGT00940000168313 ENSGT00940000164287 ENSGT00390000006658.a.a ENSGT00970000193381.a.b.a.b.a.b.a.a.b.b.a.b ENSGT00970000193381.a.b.a.b.a.b.a.a.b.b.a.a.a ENSGT00940000156286.eb ENSGT00940000157660 ENSGT00390000005529.a Haplochromini ANCESTRAL SPECIES 1 ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a.b ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b.i ENSGT00950000183127.c.b.d.a.a.a.b.j ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000003224.A ENSGT00940000161227 ENSGT00940000162143 ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00970000193381.a.b.a.b.a.b.b ENSGT00950000182846.a.a.b.b.a ENSGT00940000168313 ENSGT00940000164287 ENSGT00390000006658.a.a ENSGT00970000193381.a.b.a.b.a.b.a.a.b.b.a.b ENSGT00970000193381.a.b.a.b.a.b.a.a.b.b.a.a.a ENSGT00940000156286.eb ENSGT00940000157660 ENSGT00390000005529.a Haplochromini_A ANCESTRAL SPECIES ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a.b ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b.i ENSGT00950000183127.c.b.d.a.a.a.b.j ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000003224.A ENSGT00940000161227 ENSGT00940000162143 ENSGT00940000179311 ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00950000182846.a.a.b.b.a ENSGT00970000193381.a.b.a.b.a.b.b ENSGT00940000154466.lc.b ENSGT00940000168313 ENSGT00940000164287 ENSGT00390000006658.a.a ENSGT00970000193381.a.b.a.b.a.b.a.a.b.b.a.b ENSGT00970000193381.a.b.a.b.a.b.a.a.b.b.a.a.a ENSGT00940000156286.eb P. nyererei MODERN SPECIES 307 ccndbp1 (ENSPNYG00000011012) ENSPNYG00000011038 pmepa1 (ENSPNYG00000011055) pck1 (ENSPNYG00000011084) ENSPNYG00000011124 CHMP4B (ENSPNYG00000011165) ahcy (ENSPNYG00000011182) ENSPNYG00000011229 raly (ENSPNYG00000011247) ENSPNYG00000011261 cyc1 (ENSPNYG00000011279) ENSPNYG00000011293 ENSPNYG00000011310 ergic3 (ENSPNYG00000011336) romo1 (ENSPNYG00000011395) mych (ENSPNYG00000011412) ##22 mtss1 (ENSPNYG00000011436) ##11 ENSPNYG00000011466 ENSPNYG00000011498 ENSPNYG00000011506 ENSPNYG00000011520 ENSPNYG00000011539 ENSPNYG00000011564 hmgb2a (ENSPNYG00000011609) ENSPNYG00000011651 ccdc51 (ENSPNYG00000011679) osgn1 (ENSPNYG00000011704) ENSPNYG00000011727 ENSPNYG00000011746 ENSPNYG00000011762 FLNB (ENSPNYG00000011834) Haplochromini_B ANCESTRAL SPECIES ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a.b ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b.i ENSGT00950000183127.c.b.d.a.a.a.b.j ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00390000012445.b ENSGT00970000193381.a.b.a.b.a.a.b.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000003224.A ENSGT00940000161227 ENSGT00940000162143 ENSGT00940000179311 ENSGT00970000193381.a.b.a.b.a.a.b.a ENSGT00970000193381.a.b.a.b.a.b.b ENSGT00950000182846.a.a.b.b.a ENSGT00940000154466.lc.b ENSGT00940000168313 ENSGT00940000164287 ENSGT00390000006658.a.a ENSGT00970000193381.a.b.a.b.a.b.a.a.b.b.a.b ENSGT00970000193381.a.b.a.b.a.b.a.a.b.b.a.a.a ENSGT00940000156286.eb Eastern happy MODERN SPECIES 17 ENSACLG00000007256 pmepa1 (ENSACLG00000007265) pck1 (ENSACLG00000007303) ENSACLG00000007328 ENSACLG00000007366 CHMP4B (ENSACLG00000007406) ahcy (ENSACLG00000007418) ENSACLG00000007556 raly (ENSACLG00000007561) ENSACLG00000008161 cyc1 (ENSACLG00000008167) ENSACLG00000008173 ENSACLG00000008178 ergic3 (ENSACLG00000008183) romo1 (ENSACLG00000008227) mych (ENSACLG00000008234) ##22 mtss1 (ENSACLG00000008475) ##11 ENSACLG00000008515 ENSACLG00000008528 c1qc (ENSACLG00000008539) ENSACLG00000008547 ENSACLG00000008560 ENSACLG00000008578 ENSACLG00000009028 dnase1l4.1 (ENSACLG00000009063) hmgb2a (ENSACLG00000009085) ENSACLG00000009096 ccdc51 (ENSACLG00000009119) osgn1 (ENSACLG00000009138) ENSACLG00000009157 ENSACLG00000009168 Zebra mbuna MODERN SPECIES 62 ENSMZEG00005015973 cyc1 (ENSMZEG00005015971) ENSMZEG00005015967 romo1 (ENSMZEG00005015962) ergic3 (ENSMZEG00005015936) mych (ENSMZEG00005015916) ##22 ENSMZEG00005015897 Burton s mouthbrooder MODERN SPECIES 786 ENSHBUG00000018419 cyc1 (ENSHBUG00000018446) ENSHBUG00000018477 ENSHBUG00000018514 romo1 (ENSHBUG00000018528) ergic3 (ENSHBUG00000018589) mych (ENSHBUG00000018601) ##22 Lyretail cichlid MODERN SPECIES 294 ENSNBRG00000014606 pmepa1 (ENSNBRG00000014620) pck1 (ENSNBRG00000014640) ENSNBRG00000014661 ENSNBRG00000014677 CHMP4B (ENSNBRG00000014699) ahcy (ENSNBRG00000014717) ENSNBRG00000014751 raly (ENSNBRG00000014761) ENSNBRG00000014775 cyc1 (ENSNBRG00000014811) ENSNBRG00000014818 ENSNBRG00000014833 ergic3 (ENSNBRG00000014853) romo1 (ENSNBRG00000014891) mych (ENSNBRG00000014909) ##22 mtss1 (ENSNBRG00000014916) ##11 ENSNBRG00000014930 ENSNBRG00000014951 ENSNBRG00000014976 ENSNBRG00000014986 ENSNBRG00000015038 hmgb2a (ENSNBRG00000015078) ENSNBRG00000015108 ENSNBRG00000015115 ccdc51 (ENSNBRG00000015122) osgn1 (ENSNBRG00000015146) ENSNBRG00000015157 ENSNBRG00000015176 FLNB (ENSNBRG00000015211) slmapa (ENSNBRG00000015328) Nile tilapia MODERN SPECIES 17 ENSONIG00000004441 pmepa1 (ENSONIG00000004438) pck1 (ENSONIG00000004435) ENSONIG00000004432 ENSONIG00000033962 ENSONIG00000028083 ahcy (ENSONIG00000004421) ENSONIG00000004418 raly (ENSONIG00000004416) ENSONIG00000004415 cyc1 (ENSONIG00000027168) ENSONIG00000029656 ENSONIG00000004407 ergic3 (ENSONIG00000004404) romo1 (ENSONIG00000030909) mych (ENSONIG00000042437) ##22 mtss1 (ENSONIG00000004399) ##11 ENSONIG00000029583 ENSONIG00000004397 ENSONIG00000004390 scamp3 (ENSONIG00000004385) ENSONIG00000021326 ENSONIG00000021325 tma7 (ENSONIG00000031755) ccdc51 (ENSONIG00000033993) osgn1 (ENSONIG00000004382) ENSONIG00000039008 ENSONIG00000030603 ENSONIG00000040625 ENSONIG00000030016 ENSONIG00000030681 Midas cichlid MODERN SPECIES 1115 acap1 (ENSACIG00000016836) agfg2 (ENSACIG00000016883) ENSACIG00000016904 si:ch73-335l21.4 (ENSACIG00000016924) si:ch73-335l21.2 (ENSACIG00000016929) dvl2 (ENSACIG00000016934) acadvl (ENSACIG00000016983) ENSACIG00000017014 ponzr1 (ENSACIG00000017024) ENSACIG00000017033 ponzr1 (ENSACIG00000017048) ponzr1 (ENSACIG00000017056) ponzr1 (ENSACIG00000017079) ENSACIG00000017091 ENSACIG00000017097 mych (ENSACIG00000017105) ##22 mtss1 (ENSACIG00000017120) ##11 ENSACIG00000017183 ENSACIG00000017193 ENSACIG00000017213 ENSACIG00000017228 ENSACIG00000017263 ENSACIG00000017272 dnase1l4.1 (ENSACIG00000017288) tma7 (ENSACIG00000017383) ccdc51 (ENSACIG00000017404) osgn1 (ENSACIG00000017416) ENSACIG00000017456 ENSACIG00000017464 Pomacentridae ANCESTRAL SPECIES 169 ENSGT00390000012445.b ENSGT00940000156780 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000166028 ENSGT00940000168313 ENSGT00950000182846.a.a.b.b.a ENSGT00970000193381.a.b.a.b.a.b.a.a.b.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 ENSGT00390000003224.A Bicolor damselfish MODERN SPECIES 574 ENSSPAG00000003865 cyc1 (ENSSPAG00000003834) ENSSPAG00000003813 romo1 (ENSSPAG00000003804) ergic3 (ENSSPAG00000003764) mych (ENSSPAG00000003752) ##22 ENSSPAG00000003736 mtss1 (ENSSPAG00000003704) ##11 Atherinomorphae ANCESTRAL SPECIES 2 ENSGT01050000244866.D.a.c ENSGT00390000018016 ENSGT00940000161847.b.a.e.a.a ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000176173 ENSGT00390000012445.b ENSGT00970000193381.a.a.a.b ENSGT00940000156780 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00970000193381.a.b.a.b.a.b.a.b.j.b ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00940000171889 ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00530000066252 ENSGT00940000165432 ENSGT00940000156624 Oryzias ANCESTRAL SPECIES 1 ENSGT00940000166842 ENSGT00940000160611 ENSGT00940000162210 ENSGT00940000160586 ENSGT00940000165482 ENSGT00940000163873.c.b ENSGT00940000160613 ENSGT00950000182991.A.a.c.a.a ENSGT00950000182986.a.a ##16 ENSGT00940000170238 ENSGT00390000012445.b ENSGT00970000193381.a.a.a.b ENSGT00940000156780 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 Oryzias_b ANCESTRAL SPECIES 41 ENSGT00940000160586 ENSGT00940000177167 ENSGT00940000158547.d #25 ENSGT00940000166842 ENSGT00940000165482 ENSGT00940000163873.c.b ENSGT00940000160613 ENSGT00950000182991.A.a.c.a.a ENSGT00950000182986.a.a ##16 ENSGT00940000170238 ENSGT00390000012445.b ENSGT00970000193381.a.a.a.b ENSGT00940000156780 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00390000010830 ENSGT00530000063880.a ENSGT00390000003721.d.a.g.a ENSGT00390000013132.b.a ENSGT01000000214677.b ENSGT00530000063711.a ENSGT00940000155874.b ENSGT00940000156991.a.a ENSGT00730000111121 ENSGT00390000000483.b ENSGT00390000014853 ENSGT00940000164716.C ENSGT00390000016221 ENSGT00940000154127.A ENSGT00940000154127.B Indian medaka MODERN SPECIES 389 ENSOMEG00000008169 ENSOMEG00000008101 ENSOMEG00000008078 #25 st3gal8 (ENSOMEG00000008055) ENSOMEG00000008026 ENSOMEG00000008009 REM1 (ENSOMEG00000007991) pnp4a (ENSOMEG00000007945) trib3 (ENSOMEG00000007878) ##16 ENSOMEG00000007851 ENSOMEG00000007809 cyc1 (ENSOMEG00000007790) ENSOMEG00000007753 ergic3 (ENSOMEG00000007727) romo1 (ENSOMEG00000007647) mych (ENSOMEG00000007629) ##22 cmah (ENSOMEG00000007592) ENSOMEG00000007532 SEC61A1 (ENSOMEG00000007488) chchd4a (ENSOMEG00000007422) ENSOMEG00000007405 ENSOMEG00000007389 ENSOMEG00000000816 loxl2a (ENSOMEG00000007284) ENSOMEG00000007203 aggf1 (ENSOMEG00000007139) ENSOMEG00000007115 TLCD3B (ENSOMEG00000007098) nlk1 (ENSOMEG00000007080) MAZ (ENSOMEG00000007045) cdipt (ENSOMEG00000007028) Oryzias_a ANCESTRAL SPECIES ENSGT00940000155285.a ##22 Chinese medaka MODERN SPECIES 5281 REM1 (ENSOSIG00000004920) ENSOSIG00000004961 ##16 ENSOSIG00000004963 ENSOSIG00000004975 cyc1 (ENSOSIG00000004967) ENSOSIG00000004978 ENSOSIG00000004980 ENSOSIG00000004987 ergic3 (ENSOSIG00000004998) romo1 (ENSOSIG00000005009) ENSOSIG00000005012 mych (ENSOSIG00000005015) ##22 Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT00390000018016 ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00940000154459.A ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000157601 ENSGT00970000193381.a.a.a.a.b.a ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.b.b.s ENSGT00390000012445.b ENSGT00970000193381.a.a.a.b ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00970000193381.a.b.a.b.a.b.a.b.j.b ENSGT00390000006658.a.a ENSGT00940000164287 ENSGT00390000003710 ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 ENSGT00390000003224.A ENSGT00940000156286 ENSGT00940000157660 ENSGT00390000005529.a ENSGT00530000066252 ENSGT00940000165432 ENSGT00940000156624 Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000155285.a ##22 Mangrove rivulus MODERN SPECIES 453 C1QB (ENSKMAG00000015920) C1QC (ENSKMAG00000015897) C1QA (ENSKMAG00000015890) ENSKMAG00000015880 ENSKMAG00000015871 dnase1l4.1 (ENSKMAG00000015841) tma7 (ENSKMAG00000015820) ccdc51 (ENSKMAG00000015794) osgn1 (ENSKMAG00000015773) ENSKMAG00000015757 mtss1 (ENSKMAG00000015705) ##11 mych (ENSKMAG00000015688) ##22 Cyprinodontoidei ANCESTRAL SPECIES 52 ENSGT00390000006044 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00950000182976.a.b.c ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00940000176173 ENSGT00940000157601 ENSGT00970000193381.a.a.a.a.b.a ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.b.b.s ENSGT00390000012445.b ENSGT00970000193381.a.a.a.b ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a NAME_4 ANCESTRAL SPECIES 336 ENSGT00390000006044 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00950000182976.a.b.c ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a Mummichog MODERN SPECIES 613 mych (ENSFHEG00000003393) ##22 mtss1 (ENSFHEG00000003382) ##11 DEPDC7 (ENSFHEG00000003350) ENSFHEG00000003344 ENSFHEG00000003335 ahcy (ENSFHEG00000003318) Sheepshead minnow MODERN SPECIES 535 ENSCVAG00000023400 ENSCVAG00000023399 smpd4 (ENSCVAG00000023398) romo1 (ENSCVAG00000023397) ergic3 (ENSCVAG00000023396) mych (ENSCVAG00000023395) ##22 ENSCVAG00000023394 ENSCVAG00000023393 ##11 ahcy (ENSCVAG00000023390) ENSCVAG00000023389 Poeciliinae ANCESTRAL SPECIES 31 ENSGT00390000006044 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00950000182976.a.b.c ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000176173 ENSGT00390000012445.b ENSGT00970000193381.a.a.a.b.f ENSGT00970000193381.a.a.a.b.e ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT00970000193381.a.a.a.a.a.a.a.c.a.a.b.b.b.a.b Poecilia ANCESTRAL SPECIES 25 ENSGT00390000006044 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00950000182976.a.b.c ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000176173 ENSGT00390000012445.b ENSGT00970000193381.a.a.a.b.f ENSGT00970000193381.a.a.a.b.e ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT00390000007458 NAME_6 ANCESTRAL SPECIES 288 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00950000182976.a.b.c ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000176173 ENSGT00390000012445.b ENSGT00970000193381.a.a.a.b.f ENSGT00970000193381.a.a.a.b.e ENSGT00940000161090.B.c.b.b.a ENSGT00950000183202.a.a ENSGT00530000063880.a ENSGT00390000012257 ENSGT00390000014941 ENSGT00390000007458 ENSGT01100000263545.a.b.d.b Sailfin molly MODERN SPECIES 2893 mych (ENSPLAG00000022335) ##22 Amazon molly MODERN SPECIES 761 mych (ENSPFOG00000019096) ##22 mtss1 (ENSPFOG00000019105) ##11 ENSPFOG00000019113 ENSPFOG00000019118 ahcy (ENSPFOG00000019125) ENSPFOG00000024012 cyc1 (ENSPFOG00000019130) ENSPFOG00000020566 ENSPFOG00000023738 ENSPFOG00000024706 rbl1 (ENSPFOG00000019149) TMEM74B (ENSPFOG00000019164) psmf1 (ENSPFOG00000019165) pigu (ENSPFOG00000019169) Guppy MODERN SPECIES 457 ENSPREG00000021366 ENSPREG00000021351 ENSPREG00000021340 aldh4a1 (ENSPREG00000021317) ASCL5 (ENSPREG00000021303) ENSPREG00000021293 PIK3C2B (ENSPREG00000021267) FAM107A (ENSPREG00000021220) mkrn2 (ENSPREG00000021199) MKRN2OS (ENSPREG00000021189) ENSPREG00000021166 rbm39a (ENSPREG00000021088) smpd4 (ENSPREG00000020995) romo1 (ENSPREG00000020948) ergic3 (ENSPREG00000020899) mych (ENSPREG00000020875) ##22 ENSPREG00000020864 ##11 ENSPREG00000020850 ENSPREG00000020839 CHMP4B (ENSPREG00000020817) ahcy (ENSPREG00000020799) Platyfish MODERN SPECIES 12 ECM2 (ENSXMAG00000010488) ENSXMAG00000010481 ENSXMAG00000028031 ENSXMAG00000010495 ENSXMAG00000004155 ENSXMAG00000027206 ENSXMAG00000025597 rbbp5 (ENSXMAG00000004113) ENSXMAG00000023142 ENSXMAG00000000966 IP6K1 (ENSXMAG00000028769) smpd4 (ENSXMAG00000015857) ergic3 (ENSXMAG00000026080) romo1 (ENSXMAG00000015853) ergic3 (ENSXMAG00000026016) mych (ENSXMAG00000015837) ##22 mtss1 (ENSXMAG00000023981) ##11 ENSXMAG00000015809 ENSXMAG00000023864 CHMP4B (ENSXMAG00000027699) ahcy (ENSXMAG00000021884) ENSXMAG00000027433 ENSXMAG00000029351 cyc1 (ENSXMAG00000014544) ENSXMAG00000014556 ENSXMAG00000023097 ENSXMAG00000014559 rbl1 (ENSXMAG00000014582) TMEM74B (ENSXMAG00000029130) psmf1 (ENSXMAG00000028617) ENSXMAG00000024247 Pinecone sodierfish MODERN SPECIES 19 ENSMMDG00005009598 pck1 (ENSMMDG00005009595) PMEPA1 (ENSMMDG00005009588) C20orf85 (ENSMMDG00005009585) ENSMMDG00005009579 ahcy (ENSMMDG00005009142) ASIP (ENSMMDG00005009129) ENSMMDG00005009125 raly (ENSMMDG00005009123) ENSMMDG00005009119 ENSMMDG00005009118 ENSMMDG00005009115 cyc1 (ENSMMDG00005009091) romo1 (ENSMMDG00005009084) ergic3 (ENSMMDG00005009062) mych (ENSMMDG00005009056) ##22 ENSMMDG00005009055 mtss1 (ENSMMDG00005009035) ##11 ENSMMDG00005009017 osgn1 (ENSMMDG00005008988) ccdc51 (ENSMMDG00005008979) ENSMMDG00005008978 dnase1l4.1 (ENSMMDG00005008974) C1QA (ENSMMDG00005008970) ENSMMDG00005008968 C1QB (ENSMMDG00005008965) ENSMMDG00005008962 nfasca (ENSMMDG00005007119) ENSMMDG00005006931 ccndbp1 (ENSMMDG00005006908) SERINC3 (ENSMMDG00005006537) Osteoglossiformes ANCESTRAL SPECIES 34 ENSGT00950000183066.a.b.a.b ENSGT00390000015137 ENSGT01050000244866.D.a ENSGT00390000018016 ENSGT00390000001912.f ENSGT00390000000724.c.a ENSGT00940000154459.A ENSGT00940000154663 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00390000012445 ENSGT00390000005315 ENSGT00530000063113.B ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00390000014941 ENSGT00940000155326 ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00530000063880.a ENSGT00390000012257 Asian bonytongue MODERN SPECIES 14 rab22a (ENSSFOG00015031982) ENSSFOG00015012113 ENSSFOG00015012186 ccndbp1 (ENSSFOG00015012202) pck1 (ENSSFOG00015012219) pmepa1 (ENSSFOG00015026824) C20orf85 (ENSSFOG00015031384) ENSSFOG00015012264 ahcy (ENSSFOG00015012274) asip1 (ENSSFOG00015012289) eif2s2 (ENSSFOG00015012298) raly (ENSSFOG00015024490) cyc1 (ENSSFOG00015012314) romo1 (ENSSFOG00015012397) ergic3 (ENSSFOG00015012335) mych (ENSSFOG00015026677) ##22 mtss1 (ENSSFOG00015012460) ##11 osgn1 (ENSSFOG00015012606) pigu (ENSSFOG00015012619) PTPRT (ENSSFOG00015012703) rbl1 (ENSSFOG00015012816) CHD6 (ENSSFOG00015012920) ripor3 (ENSSFOG00015013027) blcap (ENSSFOG00015032539) TMEM74B (ENSSFOG00015013109) psmf1 (ENSSFOG00015024482) AMHR2 (ENSSFOG00015013135) ENSSFOG00015030843 PCBP2 (ENSSFOG00015013231) MAP3K12 (ENSSFOG00015013294) myg1 (ENSSFOG00015013355) P. kingsleyae MODERN SPECIES 51 ENSPKIG00000004172 ANKRD60 (ENSPKIG00000004240) ENSPKIG00000004353 ccndbp1 (ENSPKIG00000004582) pck1 (ENSPKIG00000004654) pmepa1 (ENSPKIG00000004698) C20orf85 (ENSPKIG00000004726) CHMP4B (ENSPKIG00000004747) ahcy (ENSPKIG00000004778) asip1 (ENSPKIG00000004798) eif2s2 (ENSPKIG00000004837) raly (ENSPKIG00000004894) cyc1 (ENSPKIG00000004950) ergic3 (ENSPKIG00000004998) romo1 (ENSPKIG00000005121) mych (ENSPKIG00000005134) ##22 mtss1 (ENSPKIG00000005179) ##11 osgn1 (ENSPKIG00000005252) pigu (ENSPKIG00000005277) PTPRT (ENSPKIG00000005339) rbl1 (ENSPKIG00000005446) CHD6 (ENSPKIG00000005578) ripor3 (ENSPKIG00000005666) blcap (ENSPKIG00000005765) TMEM74B (ENSPKIG00000005780) psmf1 (ENSPKIG00000005797) rspo4 (ENSPKIG00000005816) ENSPKIG00000005828 ENSPKIG00000005839 ENSPKIG00000005852 ENSPKIG00000005857 Reedfish MODERN SPECIES 1 NFATC2 (ENSECRG00000010756) ENSECRG00000010747 cse1l (ENSECRG00000010735) snrpb (ENSECRG00000010721) dpm1 (ENSECRG00000010712) adnpa (ENSECRG00000010704) pard6b (ENSECRG00000010695) sod1 (ENSECRG00000010691) ENSECRG00000010688 ENSECRG00000010641 ENSECRG00000010619 ENSECRG00000010605 ENSECRG00000010599 matn4 (ENSECRG00000010588) RBPJL (ENSECRG00000010566) mych (ENSECRG00000010553) ##22 mtss1 (ENSECRG00000010526) ##11 osgn1 (ENSECRG00000010512) eif6 (ENSECRG00000010505) MMP24 (ENSECRG00000010491) ENSECRG00000010479 ENSECRG00000010475 anxa13l (ENSECRG00000010467) fam83c (ENSECRG00000010460) uqcc1 (ENSECRG00000010453) GDF5 (ENSECRG00000010448) ENSECRG00000010442 oser1 (ENSECRG00000010438) ergic3 (ENSECRG00000010414) romo1 (ENSECRG00000010402) cyc1 (ENSECRG00000010394) Sarcopterygii ANCESTRAL SPECIES 106 ENSGT00390000018330 ENSGT00940000159233 ENSGT00950000182872.f.a.a.b ENSGT00940000160331 ENSGT00940000156477 ENSGT00940000164502 ENSGT00940000154468 ENSGT00940000155740 ENSGT00940000160611 ENSGT00940000162210 ENSGT00940000160586 ENSGT00940000165482 ENSGT00390000012445 ENSGT00530000063113.B ENSGT00390000005315 ENSGT00940000155285.a ##22 ENSGT00950000183156.a.b.b.b.b.b ##11 ENSGT00390000006658.a.a ENSGT00950000183202.a.a ENSGT01040000241001 ENSGT00940000158986 ENSGT00700000104550.a Tetrapoda ANCESTRAL SPECIES ENSGT00940000155285.a ##22 Amniota ANCESTRAL SPECIES ENSGT00940000155285.a ##22 Mammalia ANCESTRAL SPECIES ENSGT00940000155285.a ##22 Theria ANCESTRAL SPECIES ENSGT00940000155285.a ##22 Eutheria ANCESTRAL SPECIES ENSGT00940000155285.a ##22 Atlantogenata ANCESTRAL SPECIES ENSGT00940000155285.a ##22 Afrotheria ANCESTRAL SPECIES ENSGT00940000155285.a ##22 Tenrec MODERN SPECIES 15321 ENSETEG00000007657 ##22 Coelacanth MODERN SPECIES 227 NEURL2 (ENSLACG00000018723) CTSA (ENSLACG00000018727) PLTP (ENSLACG00000018736) PCIF1 (ENSLACG00000018756) ENSLACG00000018778 arhgap46a (ENSLACG00000018784) RBM39 (ENSLACG00000018811) NFS1 (ENSLACG00000018817) cpne1 (ENSLACG00000018820) ENSLACG00000018839 ENSLACG00000018874 ENSLACG00000018892 CYC1 (ENSLACG00000018901) ERGIC3 (ENSLACG00000022352) ROMO1 (ENSLACG00000018912) mych (ENSLACG00000018920) ##22 mtss1 (ENSLACG00000018932) ##11 osgn1 (ENSLACG00000018955) EIF6 (ENSLACG00000018972) MMP24 (ENSLACG00000018981) MYBL2 (ENSLACG00000018995) IFT52 (ENSLACG00000019001) PLCG1 (ENSLACG00000019007) ZHX3 (ENSLACG00000019016) RAB5IF (ENSLACG00000019030) GGT7 (ENSLACG00000019032) NCOA6 (ENSLACG00000019038) TP53INP2 (ENSLACG00000019043) PIGU (ENSLACG00000019048) MAP1LC3A (ENSLACG00000019052) ITCH (ENSLACG00000019055) Elephant shark MODERN SPECIES 390 ENSCMIG00000002618 ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00940000155285 #22 Hagfish MODERN SPECIES 65 ENSEBUG00000008899 ENSEBUG00000006236 ENSEBUG00000006755 ENSEBUG00000014496 rnf139 (ENSEBUG00000016119) #8 ENSEBUG00000016681 ENSEBUG00000003572 ENSEBUG00000015221 ENSEBUG00000003600 pex3 (ENSEBUG00000015554) ENSEBUG00000011910 ENSEBUG00000010477 ENSEBUG00000000604 ENSEBUG00000012977 ENSEBUG00000004927 ENSEBUG00000007045 #22 ENSEBUG00000012845