Euteleostomi ANCESTRAL SPECIES 1 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00940000174521 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000163793.A.a Sarcopterygii ANCESTRAL SPECIES 1 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00940000174521 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Tetrapoda ANCESTRAL SPECIES 2 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Amniota ANCESTRAL SPECIES 4 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Mammalia ANCESTRAL SPECIES 10 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Theria DUPLICATION Theria DUPLICATION Theria DUPLICATION Theria ANCESTRAL SPECIES 11 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Eutheria ANCESTRAL SPECIES 6 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Boreoeutheria ANCESTRAL SPECIES 9 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000185529 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 Euarchontoglires ANCESTRAL SPECIES 8 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Primates ANCESTRAL SPECIES 8 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Haplorrhini ANCESTRAL SPECIES 4 ENSGT00390000007246 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Simiiformes ANCESTRAL SPECIES 6 ENSGT00390000007246 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Catarrhini ANCESTRAL SPECIES 7 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT01040000240503.B.eb.b #10 ENSGT00940000157105 #11 ENSGT00940000154629.B.db.b.b ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000183183.b.a.y.a.a.b #23 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00940000165612 #33 ENSGT00940000164545 #34 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 Hominoidea ANCESTRAL SPECIES 8 ENSGT00940000155498 #7 ENSGT00940000155389.k #9 ENSGT01040000240503.B.eb.b #10 ENSGT00940000157105 #11 ENSGT00940000154629.B.db.b.b ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000183183.b.a.y.a.a.b #23 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00940000165612 #33 ENSGT00940000164545 #34 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 Hominidae ANCESTRAL SPECIES 7 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT00940000155389.k #9 ENSGT01040000240503.B.eb.b #10 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000183183.b.a.y.a.a.b #23 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00940000165612 #33 ENSGT00940000164545 #34 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 7 ENSGT00940000155498 #7 ENSGT00950000182878.b.b.`b.a.a #8 ENSGT00940000155389.k #9 ENSGT01040000240503.B.eb.b #10 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000183183.b.a.y.a.a.b #23 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00940000165612 #33 ENSGT00940000164545.a #34 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 Homo/Pan group ANCESTRAL SPECIES 8 ENSGT00940000155498 #7 ENSGT00950000182878.b.b.`b.a.a #8 ENSGT00940000155389.k #9 ENSGT01040000240503.B.eb.b #10 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000183183.b.a.y.a.a.b #23 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00940000165612 #33 ENSGT00940000164545.a #34 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 Pan ANCESTRAL SPECIES 21 ENSGT00950000182878.b.b.`b.a.a #8 ENSGT00940000155389.k #9 ENSGT01040000240503.B.eb.b #10 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00990000203720.a.b.b.a.a.a #14 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000183183.b.a.y.a.a.b #23 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00940000165612 #33 ENSGT00940000164545.a #34 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 Bonobo MODERN SPECIES 18 ZNF366 (ENSPPAG00000042198) #7 ENSPPAG00000039984 #8 TNPO1 (ENSPPAG00000042518) #9 ENSPPAG00000028872 #10 FCHO2 (ENSPPAG00000027023) #11 TMEM171 (ENSPPAG00000031784) #12 TMEM174 (ENSPPAG00000031226) #13 ENSPPAG00000028226 #14 BTF3 (ENSPPAG00000025817) #15 ANKRA2 (ENSPPAG00000043347) #16 UTP15 (ENSPPAG00000031829) #17 ARHGEF28 (ENSPPAG00000027640) #18 ENC1 (ENSPPAG00000026162) #19 HEXB (ENSPPAG00000042905) #20 GFM2 (ENSPPAG00000036359) #21 NSA2 (ENSPPAG00000042622) #22 ENSPPAG00000040994 #23 FAM169A (ENSPPAG00000042903) #24 ENSPPAG00000041224 #25 ENSPPAG00000035800 #26 ANKRD31 (ENSPPAG00000033501) #27 HMGCR (ENSPPAG00000034707) #28 CERT1 (ENSPPAG00000042589) #29 POLK (ENSPPAG00000026238) #30 ANKDD1B (ENSPPAG00000039465) #31 POC5 (ENSPPAG00000037734) #32 ENSPPAG00000035826 #33 ENSPPAG00000038410 #34 SV2C (ENSPPAG00000042256) #35 F2RL2 (ENSPPAG00000036549) #36 IQGAP2 (ENSPPAG00000029477) #37 Chimpanzee MODERN SPECIES 18 ENSPTRG00000046360 #8 TNPO1 (ENSPTRG00000016972) #9 ENSPTRG00000050315 #10 FCHO2 (ENSPTRG00000016973) #11 TMEM171 (ENSPTRG00000016977) #12 TMEM174 (ENSPTRG00000016978) #13 ENSPTRG00000051108 #14 FOXD1 (ENSPTRG00000047627) BTF3 (ENSPTRG00000016979) ##15 ANKRA2 (ENSPTRG00000016981) #16 UTP15 (ENSPTRG00000016982) #17 ARHGEF28 (ENSPTRG00000034340) #18 ENC1 (ENSPTRG00000016987) #19 HEXB (ENSPTRG00000016988) #20 GFM2 (ENSPTRG00000016989) #21 NSA2 (ENSPTRG00000016990) #22 ENSPTRG00000051667 #23 FAM169A (ENSPTRG00000016991) #24 ENSPTRG00000044567 #26 GCNT4 (ENSPTRG00000040943) ANKRD31 (ENSPTRG00000016993) #27 HMGCR (ENSPTRG00000016994) #28 CERT1 (ENSPTRG00000016996) #29 POLK (ENSPTRG00000016997) #30 ANKDD1B (ENSPTRG00000016998) #31 POC5 (ENSPTRG00000016999) #32 ENSPTRG00000051331 #33 ENSPTRG00000044990 SV2C (ENSPTRG00000017000) #35 ENSPTRG00000046035 F2RL2 (ENSPTRG00000017003) #36 Human MODERN SPECIES 17 MRPS27 (ENSG00000113048) PTCD2 (ENSG00000049883) ZNF366 (ENSG00000178175) #7 TNPO1 (ENSG00000083312) #9 FCHO2 (ENSG00000157107) #11 TMEM171 (ENSG00000157111) #12 TMEM174 (ENSG00000164325) #13 FOXD1 (ENSG00000251493) BTF3 (ENSG00000145741) #15 ANKRA2 (ENSG00000164331) #16 UTP15 (ENSG00000164338) #17 ARHGEF28 (ENSG00000214944) #18 ENC1 (ENSG00000171617) #19 HEXB (ENSG00000049860) #20 GFM2 (ENSG00000164347) #21 NSA2 (ENSG00000164346) #22 FAM169A (ENSG00000198780) #24 GCNT4 (ENSG00000176928) ANKRD31 (ENSG00000145700) #27 HMGCR (ENSG00000113161) #28 CERT1 (ENSG00000113163) #29 POLK (ENSG00000122008) #30 ANKDD1B (ENSG00000189045) #31 POC5 (ENSG00000152359) #32 SV2C (ENSG00000122012) #35 IQGAP2 (ENSG00000145703) #37 F2RL2 (ENSG00000164220) #36 F2R (ENSG00000181104) ##36 F2RL1 (ENSG00000164251) ##36 S100Z (ENSG00000171643) CRHBP (ENSG00000145708) Gorilla MODERN SPECIES 8 PTCD2 (ENSGGOG00000010695) ZNF366 (ENSGGOG00000004981) #7 ENSGGOG00000024772 #8 TNPO1 (ENSGGOG00000026800) #9 ENSGGOG00000022549 #10 FCHO2 (ENSGGOG00000022902) #11 TMEM171 (ENSGGOG00000004346) #12 TMEM174 (ENSGGOG00000008689) #13 ENSGGOG00000000166 #15 ANKRA2 (ENSGGOG00000003298) #16 UTP15 (ENSGGOG00000003301) #17 ARHGEF28 (ENSGGOG00000015967) #18 ENC1 (ENSGGOG00000003121) #19 HEXB (ENSGGOG00000009296) #20 GFM2 (ENSGGOG00000013739) #21 NSA2 (ENSGGOG00000014365) #22 ENSGGOG00000039925 #23 FAM169A (ENSGGOG00000003620) #24 ENSGGOG00000040312 ENSGGOG00000041097 ENSGGOG00000023345 #26 GCNT4 (ENSGGOG00000027775) ANKRD31 (ENSGGOG00000017052) #27 HMGCR (ENSGGOG00000010919) #28 CERT1 (ENSGGOG00000005049) #29 POLK (ENSGGOG00000015644) #30 ENSGGOG00000015099 #31 POC5 (ENSGGOG00000015106) #32 ENSGGOG00000039885 ENSGGOG00000042268 #34 ENSGGOG00000039209 Orangutan MODERN SPECIES 18 MRPS27 (ENSPPYG00000015542) PTCD2 (ENSPPYG00000015543) ZNF366 (ENSPPYG00000015544) #7 TNPO1 (ENSPPYG00000015545) #9 FCHO2 (ENSPPYG00000015546) #11 TMEM171 (ENSPPYG00000015547) #12 TMEM174 (ENSPPYG00000015548) #13 FOXD1 (ENSPPYG00000033582) BTF3 (ENSPPYG00000029576) #15 ANKRA2 (ENSPPYG00000015549) #16 UTP15 (ENSPPYG00000015550) #17 ARHGEF28 (ENSPPYG00000015553) #18 ENC1 (ENSPPYG00000015555) #19 HEXB (ENSPPYG00000029577) #20 GFM2 (ENSPPYG00000015556) #21 NSA2 (ENSPPYG00000025926) #22 FAM169A (ENSPPYG00000015557) #24 ENSPPYG00000029971 #26 GCNT4 (ENSPPYG00000015558) ANKRD31 (ENSPPYG00000015559) #27 HMGCR (ENSPPYG00000015560) #28 CERT1 (ENSPPYG00000015561) #29 POLK (ENSPPYG00000015562) #30 ANKDD1B (ENSPPYG00000015563) #31 POC5 (ENSPPYG00000015564) #32 ENSPPYG00000015565 SV2C (ENSPPYG00000015566) #35 IQGAP2 (ENSPPYG00000015568) #37 F2RL2 (ENSPPYG00000015569) #36 F2R (ENSPPYG00000015570) ##36 F2RL1 (ENSPPYG00000041489) ##36 Gibbon DUPLICATION Gibbon MODERN SPECIES 22 ENSNLEG00000035849 ENSNLEG00000031574 ENSNLEG00000027782 ENSNLEG00000030510 ENSNLEG00000031517 ENSNLEG00000027815 ENSNLEG00000018900 #22 ENSNLEG00000032614 ENSNLEG00000033125 ENSNLEG00000011593 TRIML2 (ENSNLEG00000011579) ENSNLEG00000027582 FAT1 (ENSNLEG00000011574) MTNR1A (ENSNLEG00000011570) F11 (ENSNLEG00000011541) KLKB1 (ENSNLEG00000011512) ENSNLEG00000011507 FAM149A (ENSNLEG00000011436) TLR3 (ENSNLEG00000011418) ENSNLEG00000028547 SORBS2 (ENSNLEG00000011297) PDLIM3 (ENSNLEG00000011261) Gibbon MODERN SPECIES 8 ZNF366 (ENSNLEG00000004555) #7 TNPO1 (ENSNLEG00000004572) #9 FCHO2 (ENSNLEG00000004635) #11 ENSNLEG00000028575 TMEM171 (ENSNLEG00000028951) #12 TMEM174 (ENSNLEG00000004713) #13 ENSNLEG00000031333 ENSNLEG00000027304 #15 ENSNLEG00000032757 ANKRA2 (ENSNLEG00000004739) #16 UTP15 (ENSNLEG00000004753) #17 ARHGEF28 (ENSNLEG00000004756) #18 ENC1 (ENSNLEG00000004820) #19 HEXB (ENSNLEG00000004826) #20 GFM2 (ENSNLEG00000004979) #21 ENSNLEG00000005046 #22 FAM169A (ENSNLEG00000005054) #24 ENSNLEG00000028090 #26 GCNT4 (ENSNLEG00000018221) ANKRD31 (ENSNLEG00000005068) #27 HMGCR (ENSNLEG00000005082) #28 CERT1 (ENSNLEG00000005136) #29 POLK (ENSNLEG00000005220) #30 ANKDD1B (ENSNLEG00000005267) #31 POC5 (ENSNLEG00000005274) #32 ENSNLEG00000036189 SV2C (ENSNLEG00000034568) #35 TMC5 (ENSNLEG00000005334) CLEC19A (ENSNLEG00000005391) SYT17 (ENSNLEG00000005392) ITPRIPL2 (ENSNLEG00000005398) Cercopithecidae ANCESTRAL SPECIES 5 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT01040000240503.B.eb.b #10 ENSGT00940000157105 #11 ENSGT00940000154629.B.db.b.b ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000183183.b.a.y.a.a.b #23 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00940000165612 #33 ENSGT00940000164545 #34 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 Cercopithecinae ANCESTRAL SPECIES 9 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT01040000240503.B.eb.b #10 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000183183.b.a.y.a.a.b #23 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00940000165612 #33 ENSGT00940000164545 #34 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 Cercopithecinae_a ANCESTRAL SPECIES 9 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT01040000240503.B.eb.b #10 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00950000182802.B.a.a.a.a.h.b.b ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000183183.b.a.y.a.a.b #23 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000005569.x.a.b.b.a.a ENSGT00390000004454 #32 ENSGT00940000165612 #33 ENSGT00940000164545 #34 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 Cercopithecinae_b ANCESTRAL SPECIES 4 ENSGT00940000155498 #7 ENSGT00940000155389.j #9 ENSGT01040000240503.B.eb.b #10 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00950000182802.B.a.a.a.a.h.b.b ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000183183.b.a.y.a.a.b #23 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000005569.x.a.b.b.a.a ENSGT00390000004454 #32 ENSGT00940000165612 #33 ENSGT00940000164545 #34 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 Cercopithecinae_d ANCESTRAL SPECIES 48 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT00940000155389.j #9 ENSGT01040000240503.B.eb.b #10 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000183183.b.a.y.a.a.b #23 ENSGT00510000048902.a #24 ENSGT00390000005534.b.b.c.a ##26 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000005569.x.a.b.b.a.a ENSGT00390000004454 #32 ENSGT00940000165612 #33 ENSGT00940000164545 #34 ENSGT00950000182940.b.b #35 ENSGT00910000147370 Sooty mangabey MODERN SPECIES 296 PTCD2 (ENSCATG00000019069) ZNF366 (ENSCATG00000040573) #7 ENSCATG00000043792 #9 ENSCATG00000044660 #10 FCHO2 (ENSCATG00000034829) #11 TMEM171 (ENSCATG00000042228) #12 TMEM174 (ENSCATG00000036156) #13 FOXD1 (ENSCATG00000017156) BTF3 (ENSCATG00000014918) #15 ANKRA2 (ENSCATG00000030220) #16 UTP15 (ENSCATG00000008006) #17 ARHGEF28 (ENSCATG00000010807) #18 ENC1 (ENSCATG00000017777) #19 HEXB (ENSCATG00000030875) #20 GFM2 (ENSCATG00000036394) #21 NSA2 (ENSCATG00000025984) #22 ENSCATG00000044383 #23 FAM169A (ENSCATG00000040937) #24 ENSCATG00000041782 ##26 GCNT4 (ENSCATG00000016075) ANKRD31 (ENSCATG00000029258) #27 HMGCR (ENSCATG00000014646) #28 CERT1 (ENSCATG00000037646) #29 ENSCATG00000019819 POLK (ENSCATG00000014199) #30 ANKDD1B (ENSCATG00000040088) #31 ENSCATG00000039793 POC5 (ENSCATG00000044188) #32 ENSCATG00000033028 ENSCATG00000038048 ENSCATG00000004582 #34 Drill MODERN SPECIES 197 TNPO1 (ENSMLEG00000030740) #9 ENSMLEG00000031650 #10 FCHO2 (ENSMLEG00000042403) #11 TMEM171 (ENSMLEG00000043574) #12 TMEM174 (ENSMLEG00000040536) #13 ENSMLEG00000026788 BTF3 (ENSMLEG00000037682) #15 ANKRA2 (ENSMLEG00000031536) #16 UTP15 (ENSMLEG00000038816) #17 ARHGEF28 (ENSMLEG00000021822) #18 ENC1 (ENSMLEG00000021735) #19 HEXB (ENSMLEG00000037337) #20 GFM2 (ENSMLEG00000038075) #21 NSA2 (ENSMLEG00000035058) #22 ENSMLEG00000032772 #23 FAM169A (ENSMLEG00000034747) #24 ENSMLEG00000013497 ENSMLEG00000038467 ##26 GCNT4 (ENSMLEG00000027356) ANKRD31 (ENSMLEG00000037468) #27 HMGCR (ENSMLEG00000030530) #28 CERT1 (ENSMLEG00000042639) #29 ENSMLEG00000006839 POLK (ENSMLEG00000042768) #30 ANKDD1B (ENSMLEG00000029848) #31 ENSMLEG00000031391 POC5 (ENSMLEG00000039781) #32 ENSMLEG00000039763 #33 ENSMLEG00000040235 #34 Olive baboon MODERN SPECIES 15 ENSPANG00000040821 TMEM171 (ENSPANG00000017933) #12 TMEM174 (ENSPANG00000017251) #13 ENSPANG00000042783 ENSPANG00000044736 ENSPANG00000010370 ENSPANG00000048761 FOXD1 (ENSPANG00000046463) BTF3 (ENSPANG00000011936) #15 ANKRA2 (ENSPANG00000044882) #16 UTP15 (ENSPANG00000009302) #17 ARHGEF28 (ENSPANG00000012020) #18 ENC1 (ENSPANG00000003224) #19 HEXB (ENSPANG00000013386) #20 GFM2 (ENSPANG00000013600) #21 NSA2 (ENSPANG00000013346) #22 FAM169A (ENSPANG00000014042) #24 ENSPANG00000050244 ENSPANG00000010937 ENSPANG00000003862 #27 HMGCR (ENSPANG00000001531) #28 CERT1 (ENSPANG00000000059) #29 POLK (ENSPANG00000000060) #30 ENSPANG00000038550 ANKDD1B (ENSPANG00000009551) #31 POC5 (ENSPANG00000013599) #32 ENSPANG00000046931 ENSPANG00000044389 SV2C (ENSPANG00000014041) #35 ENSPANG00000044335 ENSPANG00000018228 Macaca ANCESTRAL SPECIES 7 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT01040000240503.B.eb.b #10 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00950000182802.B.a.a.a.a.h.b.b ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000183183.b.a.y.a.a.b #23 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000005569.x.a.b.b.a.a ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00730000110997.k.b.a ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 Pig-tailed macaque MODERN SPECIES 533 ZNF366 (ENSMNEG00000041882) #7 TNPO1 (ENSMNEG00000044581) #9 ENSMNEG00000029785 #10 FCHO2 (ENSMNEG00000038505) #11 TMEM171 (ENSMNEG00000042146) #12 TMEM174 (ENSMNEG00000032405) #13 ENSMNEG00000027924 FOXD1 (ENSMNEG00000043099) BTF3 (ENSMNEG00000044350) #15 ANKRA2 (ENSMNEG00000030102) #16 UTP15 (ENSMNEG00000032169) #17 ARHGEF28 (ENSMNEG00000031568) #18 ENC1 (ENSMNEG00000006975) #19 HEXB (ENSMNEG00000036163) #20 GFM2 (ENSMNEG00000034666) #21 NSA2 (ENSMNEG00000042380) #22 ENSMNEG00000031805 #23 FAM169A (ENSMNEG00000032139) #24 ENSMNEG00000019915 ANKRD31 (ENSMNEG00000038747) #27 HMGCR (ENSMNEG00000036782) #28 CERT1 (ENSMNEG00000034301) #29 ENSMNEG00000012143 POLK (ENSMNEG00000016543) #30 ANKDD1B (ENSMNEG00000040050) #31 ENSMNEG00000041053 POC5 (ENSMNEG00000028970) #32 ENSMNEG00000029783 #33 ENSMNEG00000039274 ENSMNEG00000035234 #34 SV2C (ENSMNEG00000043938) #35 Macaca_a ANCESTRAL SPECIES 8 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b.m.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000166143.A.a.b.b.b.b.a.a.b ENSGT00940000155831 #18 ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.b.b.a.a.a ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00730000110997.k.b.a ENSGT01050000245467.b.a.b ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Crab-eating macaque MODERN SPECIES 16 FCHO2 (ENSMFAG00000030926) #11 TMEM171 (ENSMFAG00000032334) #12 TMEM174 (ENSMFAG00000002335) #13 ENSMFAG00000053908 ENSMFAG00000056336 FOXD1 (ENSMFAG00000049955) ENSMFAG00000000594 ##15 ANKRA2 (ENSMFAG00000043204) #16 UTP15 (ENSMFAG00000031908) #17 ENSMFAG00000056292 ARHGEF28 (ENSMFAG00000043970) #18 ENSMFAG00000052761 ENC1 (ENSMFAG00000030568) #19 HEXB (ENSMFAG00000003959) #20 GFM2 (ENSMFAG00000039713) #21 NSA2 (ENSMFAG00000038283) #22 FAM169A (ENSMFAG00000001548) #24 GCNT4 (ENSMFAG00000005546) ANKRD31 (ENSMFAG00000044070) #27 HMGCR (ENSMFAG00000036118) #28 CERT1 (ENSMFAG00000030820) #29 POLK (ENSMFAG00000043179) #30 SV2C (ENSMFAG00000036123) #35 ENSMFAG00000000588 ENSMFAG00000048479 IQGAP2 (ENSMFAG00000032362) #37 ENSMFAG00000059937 F2RL2 (ENSMFAG00000045908) #36 F2R (ENSMFAG00000044734) ##36 F2RL1 (ENSMFAG00000037697) ##36 CRHBP (ENSMFAG00000041775) Rhesus MODERN SPECIES 16 TNPO1 (ENSMMUG00000020923) #9 FCHO2 (ENSMMUG00000015422) #11 ENSMMUG00000055761 TMEM171 (ENSMMUG00000015433) #12 TMEM174 (ENSMMUG00000021099) #13 FOXD1 (ENSMMUG00000040510) BTF3 (ENSMMUG00000022291) #15 ANKRA2 (ENSMMUG00000023513) #16 UTP15 (ENSMMUG00000023514) #17 ENSMMUG00000063528 ARHGEF28 (ENSMMUG00000017897) #18 ENSMMUG00000055930 ENC1 (ENSMMUG00000019996) #19 HEXB (ENSMMUG00000019997) #20 GFM2 (ENSMMUG00000019998) #21 NSA2 (ENSMMUG00000011196) #22 FAM169A (ENSMMUG00000011198) #24 ANKRD31 (ENSMMUG00000011061) #27 GCNT4 (ENSMMUG00000043533) ENSMMUG00000054777 HMGCR (ENSMMUG00000006139) #28 CERT1 (ENSMMUG00000006141) #29 POLK (ENSMMUG00000006144) #30 ANKDD1B (ENSMMUG00000061069) #31 POC5 (ENSMMUG00000006146) #32 SV2C (ENSMMUG00000019887) #35 ENSMMUG00000049361 IQGAP2 (ENSMMUG00000022982) #37 F2RL2 (ENSMMUG00000022988) #36 F2R (ENSMMUG00000039522) ##36 F2RL1 (ENSMMUG00000060389) ##36 Vervet Monkey DUPLICATION Vervet Monkey MODERN SPECIES 24 TEPP (ENSCSAG00000004796) ZNF319 (ENSCSAG00000018864) USB1 (ENSCSAG00000004783) MMP15 (ENSCSAG00000004779) CFAP20 (ENSCSAG00000004774) CSNK2A2 (ENSCSAG00000004772) CCDC113 (ENSCSAG00000004767) PRSS54 (ENSCSAG00000004759) GINS3 (ENSCSAG00000004750) NDRG4 (ENSCSAG00000004744) SETD6 (ENSCSAG00000004711) CNOT1 (ENSCSAG00000004731) SLC38A7 (ENSCSAG00000004703) ENSCSAG00000018465 GOT2 (ENSCSAG00000004695) ENSCSAG00000018466 #22 CDH8 (ENSCSAG00000004687) CDH11 (ENSCSAG00000004679) CDH5 (ENSCSAG00000004675) BEAN1 (ENSCSAG00000004668) TK2 (ENSCSAG00000004665) CKLF (ENSCSAG00000004662) CMTM1 (ENSCSAG00000004657) CMTM2 (ENSCSAG00000004650) CMTM3 (ENSCSAG00000004645) CMTM4 (ENSCSAG00000004637) DYNC1LI2 (ENSCSAG00000004634) TERB1 (ENSCSAG00000004627) NAE1 (ENSCSAG00000004620) CA7 (ENSCSAG00000004615) PDP2 (ENSCSAG00000018467) Vervet Monkey MODERN SPECIES 23 MRPS27 (ENSCSAG00000015626) PTCD2 (ENSCSAG00000015623) ZNF366 (ENSCSAG00000015620) #7 TNPO1 (ENSCSAG00000015616) #9 FCHO2 (ENSCSAG00000015597) #11 TMEM171 (ENSCSAG00000015548) #12 TMEM174 (ENSCSAG00000015532) #13 ENSCSAG00000019011 BTF3 (ENSCSAG00000015522) #15 ANKRA2 (ENSCSAG00000015506) #16 UTP15 (ENSCSAG00000015499) #17 ARHGEF28 (ENSCSAG00000015492) #18 ENC1 (ENSCSAG00000019415) #19 HEXB (ENSCSAG00000015476) #20 GFM2 (ENSCSAG00000015464) #21 ENSCSAG00000015450 #22 FAM169A (ENSCSAG00000015436) #24 GCNT4 (ENSCSAG00000019416) ENSCSAG00000015425 #27 HMGCR (ENSCSAG00000015420) #28 CERT1 (ENSCSAG00000015407) #29 POLK (ENSCSAG00000015397) #30 POC5 (ENSCSAG00000015388) #32 SV2C (ENSCSAG00000015376) #35 IQGAP2 (ENSCSAG00000015367) #37 F2RL2 (ENSCSAG00000015353) #36 F2R (ENSCSAG00000015345) ##36 F2RL1 (ENSCSAG00000015342) ##36 CRHBP (ENSCSAG00000015337) ENSCSAG00000015331 AGGF1 (ENSCSAG00000015324) Rhinopithecus ANCESTRAL SPECIES 114 ENSGT00940000155351.bb.c.b ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00940000154629.B.db.b.b ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00990000203720.a.b.b.a.b ##14 ENSGT00940000153288.a.b.a.b.m ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000183183.b.a.y.a.a.b #23 ENSGT00510000048902.a #24 ENSGT00390000005534.b.b.c.b.a.a.b.a.b ##26 ENSGT00940000159721 ENSGT00940000162618 #27 Black snub-nosed monkey MODERN SPECIES 1015 ENSRBIG00000000335 ZNF366 (ENSRBIG00000037679) #7 TNPO1 (ENSRBIG00000021642) #9 FCHO2 (ENSRBIG00000007669) #11 ENSRBIG00000002036 TMEM171 (ENSRBIG00000037267) #12 TMEM174 (ENSRBIG00000036025) #13 ENSRBIG00000029002 ##14 ENSRBIG00000028164 ##15 ANKRA2 (ENSRBIG00000035499) #16 UTP15 (ENSRBIG00000031078) #17 ARHGEF28 (ENSRBIG00000042101) #18 ENC1 (ENSRBIG00000003968) #19 HEXB (ENSRBIG00000030473) #20 GFM2 (ENSRBIG00000040962) #21 NSA2 (ENSRBIG00000037875) #22 FAM169A (ENSRBIG00000013278) #24 ENSRBIG00000041343 #23 ENSRBIG00000043025 ##26 ENSRBIG00000038803 #27 Golden snub-nosed monkey MODERN SPECIES 611 FCHO2 (ENSRROG00000042058) #11 TMEM171 (ENSRROG00000035606) #12 TMEM174 (ENSRROG00000035675) #13 ENSRROG00000044507 ##14 ENSRROG00000040820 ##15 ANKRA2 (ENSRROG00000036793) #16 UTP15 (ENSRROG00000034462) #17 ARHGEF28 (ENSRROG00000028997) #18 ENC1 (ENSRROG00000027286) #19 HEXB (ENSRROG00000042501) #20 GFM2 (ENSRROG00000036459) #21 NSA2 (ENSRROG00000037994) #22 ENSRROG00000044209 #23 FAM169A (ENSRROG00000040140) #24 ENSRROG00000002031 ##26 GCNT4 (ENSRROG00000036302) ANKRD31 (ENSRROG00000038255) #27 Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00390000018706.m.b.a.i #22 Cebidae ANCESTRAL SPECIES ENSGT00390000018706.m.b.a.i #22 Marmoset MODERN SPECIES DIS3 (ENSCJAG00000021117) BORA (ENSCJAG00000021112) MZT1 (ENSCJAG00000079180) ENSCJAG00000021107 ENSCJAG00000070126 ENSCJAG00000077790 DACH1 (ENSCJAG00000021093) ENSCJAG00000070122 ENSCJAG00000081793 KLHL1 (ENSCJAG00000016532) ENSCJAG00000079366 ENSCJAG00000021951 ENSCJAG00000075923 ENSCJAG00000062136 PCDH9 (ENSCJAG00000016402) ENSCJAG00000078739 #22 ENSCJAG00000078229 ENSCJAG00000085595 ENSCJAG00000075877 PCDH20 (ENSCJAG00000016415) ENSCJAG00000076988 TDRD3 (ENSCJAG00000003853) ENSCJAG00000081668 ENSCJAG00000052430 DIAPH3 (ENSCJAG00000003729) ENSCJAG00000056633 ENSCJAG00000073048 ENSCJAG00000071873 ENSCJAG00000085937 ENSCJAG00000071744 PCDH17 (ENSCJAG00000003715) Platyrrhini ANCESTRAL SPECIES 7 ENSGT00940000155498 #7 ENSGT00940000155389.m.b #9 ENSGT00940000155389.m.a #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000153288.a.a.h.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a.i #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a.j #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000153335.a.b.w.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00390000015047.d.a ENSGT00950000182940.b.b #35 ENSGT00940000174521 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1206 ENSANAG00000029419 ENSANAG00000030824 ENSANAG00000031014 ENSANAG00000037052 PAGE1 (ENSANAG00000024656) PAGE4 (ENSANAG00000029457) USP27X (ENSANAG00000019357) CLCN5 (ENSANAG00000000063) AKAP4 (ENSANAG00000033875) ENSANAG00000035064 DGKK (ENSANAG00000024570) SHROOM4 (ENSANAG00000020629) BMP15 (ENSANAG00000028806) EZHIP (ENSANAG00000027291) NUDT11 (ENSANAG00000027486) ENSANAG00000020179 #22 Mas night monkey MODERN SPECIES 670 MAP1B (ENSANAG00000023635) MRPS27 (ENSANAG00000019419) PTCD2 (ENSANAG00000029353) ZNF366 (ENSANAG00000030039) #7 ENSANAG00000022453 #9 FCHO2 (ENSANAG00000026925) #11 TMEM174 (ENSANAG00000027975) #13 FOXD1 (ENSANAG00000029094) ENSANAG00000032267 ##15 ANKRA2 (ENSANAG00000038270) #16 UTP15 (ENSANAG00000033884) #17 ARHGEF28 (ENSANAG00000026871) #18 ENC1 (ENSANAG00000020131) #19 HEXB (ENSANAG00000022254) #20 GFM2 (ENSANAG00000027737) #21 ENSANAG00000022225 #22 FAM169A (ENSANAG00000030731) #24 GCNT4 (ENSANAG00000019837) ANKRD31 (ENSANAG00000022634) #27 ENSANAG00000019757 HMGCR (ENSANAG00000030341) #28 CERT1 (ENSANAG00000035049) #29 POLK (ENSANAG00000033747) #30 POC5 (ENSANAG00000033971) #32 SV2C (ENSANAG00000020779) #35 ENSANAG00000023009 IQGAP2 (ENSANAG00000027336) #37 F2RL2 (ENSANAG00000019493) #36 F2R (ENSANAG00000020328) ##36 F2RL1 (ENSANAG00000021399) ##36 S100Z (ENSANAG00000027821) Cebidae ANCESTRAL SPECIES 6 ENSGT00940000155498 #7 ENSGT00940000155389.m.b #9 ENSGT00940000155389.m.a #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000153288.a.a.h.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a.i #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a.j #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000153335.a.b.w.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00390000015047.d.a ENSGT00950000182940.b.b #35 ENSGT00940000174521 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 Marmoset MODERN SPECIES 11 ENSCJAG00000083074 TNPO1 (ENSCJAG00000016409) #9 FCHO2 (ENSCJAG00000016496) #11 TMEM171 (ENSCJAG00000016582) #12 ENSCJAG00000078294 TMEM174 (ENSCJAG00000034922) #13 FOXD1 (ENSCJAG00000045258) BTF3 (ENSCJAG00000043136) #15 ENSCJAG00000076176 ANKRA2 (ENSCJAG00000016612) #16 UTP15 (ENSCJAG00000016617) #17 ENSCJAG00000083910 ARHGEF28 (ENSCJAG00000016645) #18 HEXB (ENSCJAG00000016664) #20 GFM2 (ENSCJAG00000016802) #21 NSA2 (ENSCJAG00000016874) #22 FAM169A (ENSCJAG00000016884) #24 GCNT4 (ENSCJAG00000016941) ANKRD31 (ENSCJAG00000016943) #27 HMGCR (ENSCJAG00000016954) #28 CERT1 (ENSCJAG00000017020) #29 POLK (ENSCJAG00000017052) #30 ANKDD1B (ENSCJAG00000017129) #31 ENSCJAG00000071025 POC5 (ENSCJAG00000017148) #32 SV2C (ENSCJAG00000020031) #35 F2RL2 (ENSCJAG00000020029) #36 IQGAP2 (ENSCJAG00000019985) #37 F2R (ENSCJAG00000086495) ##36 ENSCJAG00000084566 F2RL1 (ENSCJAG00000062182) ##36 Cebidae_a ANCESTRAL SPECIES 3 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT00940000155389.m.b #9 ENSGT00940000155389.m.a #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.a.h.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a.i #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a.j #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000153335.a.b.w.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00390000015047.d.a ENSGT00950000182940.b.b #35 ENSGT00940000174521 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 Capuchin DUPLICATION Capuchin MODERN SPECIES 50 ENSCCAG00000029389 ZNF366 (ENSCCAG00000021177) #7 TNPO1 (ENSCCAG00000026472) #9 FCHO2 (ENSCCAG00000020869) #11 TMEM171 (ENSCCAG00000032407) #12 TMEM174 (ENSCCAG00000026904) #13 FOXD1 (ENSCCAG00000006678) ENSCCAG00000033236 ##15 ANKRA2 (ENSCCAG00000033227) #16 UTP15 (ENSCCAG00000033397) #17 ARHGEF28 (ENSCCAG00000030516) #18 ENC1 (ENSCCAG00000017658) #19 HEXB (ENSCCAG00000025903) #20 GFM2 (ENSCCAG00000029580) #21 ENSCCAG00000012127 NSA2 (ENSCCAG00000017188) #22 FAM169A (ENSCCAG00000008188) #24 ENSCCAG00000018354 ENSCCAG00000030843 GCNT4 (ENSCCAG00000012660) ANKRD31 (ENSCCAG00000025762) #27 ENSCCAG00000024833 HMGCR (ENSCCAG00000023164) #28 CERT1 (ENSCCAG00000021594) #29 POLK (ENSCCAG00000029021) #30 ANKDD1B (ENSCCAG00000020279) #31 POC5 (ENSCCAG00000013495) #32 ENSCCAG00000030179 SV2C (ENSCCAG00000036246) #35 IQGAP2 (ENSCCAG00000032875) #37 F2RL2 (ENSCCAG00000023100) #36 Capuchin MODERN SPECIES 328 SLC4A11 (ENSCCAG00000029168) ITPA (ENSCCAG00000022878) DDRGK1 (ENSCCAG00000021115) LZTS3 (ENSCCAG00000035824) UBOX5 (ENSCCAG00000020530) AVP (ENSCCAG00000024006) OXT (ENSCCAG00000032860) ENSCCAG00000028201 GNRH2 (ENSCCAG00000000051) PTPRA (ENSCCAG00000023189) VPS16 (ENSCCAG00000028163) PCED1A (ENSCCAG00000027769) TMEM239 (ENSCCAG00000019930) C20orf141 (ENSCCAG00000034249) CPXM1 (ENSCCAG00000035733) ENSCCAG00000027539 #22 EBF4 (ENSCCAG00000032903) IDH3B (ENSCCAG00000036317) NOP56 (ENSCCAG00000023832) TMC2 (ENSCCAG00000008196) ZNF343 (ENSCCAG00000028537) ENSCCAG00000030974 SNRPB (ENSCCAG00000026002) TGM6 (ENSCCAG00000025799) TGM3 (ENSCCAG00000032460) STK35 (ENSCCAG00000022994) Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 43 FOXB2 (ENSSBOG00000024647) PRUNE2 (ENSSBOG00000023559) GCNT1 (ENSSBOG00000018905) ENSSBOG00000032040 ENSSBOG00000019534 PCSK5 (ENSSBOG00000009773) ENSSBOG00000009396 OSTF1 (ENSSBOG00000027446) NMRK1 (ENSSBOG00000032396) CARNMT1 (ENSSBOG00000029802) TRPM6 (ENSSBOG00000030648) RORB (ENSSBOG00000024252) ENC1 (ENSSBOG00000018607) #19 ENSSBOG00000011145 #20 GFM2 (ENSSBOG00000021848) #21 NSA2 (ENSSBOG00000032829) #22 FAM169A (ENSSBOG00000033264) #24 GCNT4 (ENSSBOG00000018505) ANKRD31 (ENSSBOG00000030519) #27 ENSSBOG00000030051 HMGCR (ENSSBOG00000028283) #28 CERT1 (ENSSBOG00000027229) #29 POLK (ENSSBOG00000034732) #30 ANKDD1B (ENSSBOG00000027462) #31 POC5 (ENSSBOG00000034084) #32 ENSSBOG00000028612 SV2C (ENSSBOG00000034394) #35 ENSSBOG00000032555 F2RL2 (ENSSBOG00000026294) #36 IQGAP2 (ENSSBOG00000020078) #37 F2R (ENSSBOG00000033584) ##36 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 49 ARMC12 (ENSSBOG00000022270) FKBP5 (ENSSBOG00000026900) TULP1 (ENSSBOG00000033656) TEAD3 (ENSSBOG00000022623) RPL10A (ENSSBOG00000027649) FANCE (ENSSBOG00000023245) PPARD (ENSSBOG00000027821) DEF6 (ENSSBOG00000027933) ZNF76 (ENSSBOG00000030807) SCUBE3 (ENSSBOG00000033009) TCP11 (ENSSBOG00000025221) ANKS1A (ENSSBOG00000023296) ENSSBOG00000034253 BLTP3A (ENSSBOG00000020282) ENSSBOG00000031528 ENSSBOG00000025658 #22 ILRUN (ENSSBOG00000026233) SPDEF (ENSSBOG00000026084) ENSSBOG00000033685 PACSIN1 (ENSSBOG00000025412) ENSSBOG00000034667 NUDT3 (ENSSBOG00000022644) SMIM29 (ENSSBOG00000030537) HMGA1 (ENSSBOG00000000498) GRM4 (ENSSBOG00000020919) MLN (ENSSBOG00000028942) ENSSBOG00000021386 IP6K3 (ENSSBOG00000034249) UQCC2 (ENSSBOG00000030900) ITPR3 (ENSSBOG00000021882) ZBTB9 (ENSSBOG00000014339) Bolivian squirrel monkey MODERN SPECIES 60 ENSSBOG00000022913 ZCRB1 (ENSSBOG00000019523) PPHLN1 (ENSSBOG00000020471) YAF2 (ENSSBOG00000012699) GXYLT1 (ENSSBOG00000035882) ENSSBOG00000020778 PDZRN4 (ENSSBOG00000032834) CNTN1 (ENSSBOG00000029438) ENSSBOG00000019571 ENSSBOG00000023935 LRRK2 (ENSSBOG00000024191) ENSSBOG00000024781 SLC2A13 (ENSSBOG00000017268) C12orf40 (ENSSBOG00000021102) ABCD2 (ENSSBOG00000033236) ENSSBOG00000020423 #22 ENSSBOG00000036233 KIF21A (ENSSBOG00000019336) CPNE8 (ENSSBOG00000033944) ENSSBOG00000023598 ENSSBOG00000035358 SYT10 (ENSSBOG00000027146) PKP2 (ENSSBOG00000034655) YARS2 (ENSSBOG00000023473) ENSSBOG00000033569 DNM1L (ENSSBOG00000026857) FGD4 (ENSSBOG00000027913) BICD1 (ENSSBOG00000027120) RESF1 (ENSSBOG00000017194) ENSSBOG00000026922 AMN1 (ENSSBOG00000025538) Tarsier DUPLICATION Tarsier MODERN SPECIES 4255 ENSTSYG00000030822 #22 Tarsier MODERN SPECIES 2483 GFM2 (ENSTSYG00000011664) #21 ENSTSYG00000029653 #22 FAM169A (ENSTSYG00000002287) #24 ENSTSYG00000029025 Strepsirrhini ANCESTRAL SPECIES 5 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Lemuriformes ANCESTRAL SPECIES 37 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 3 ENSMICG00000042695 ALDH7A1 (ENSMICG00000007316) GRAMD2B (ENSMICG00000007304) ZNF608 (ENSMICG00000000035) FCHO2 (ENSMICG00000009119) #11 TMEM171 (ENSMICG00000009140) #12 TMEM174 (ENSMICG00000043697) #13 ENSMICG00000046550 ENSMICG00000017182 ##15 ANKRA2 (ENSMICG00000035309) #16 ENSMICG00000011813 #17 ARHGEF28 (ENSMICG00000011823) #18 ENC1 (ENSMICG00000000742) #19 HEXB (ENSMICG00000032021) #20 GFM2 (ENSMICG00000000749) #21 ENSMICG00000027319 #22 FAM169A (ENSMICG00000000753) #24 GCNT4 (ENSMICG00000014409) ANKRD31 (ENSMICG00000014418) #27 HMGCR (ENSMICG00000014536) #28 CERT1 (ENSMICG00000028951) #29 POLK (ENSMICG00000000006) #30 ANKDD1B (ENSMICG00000031448) #31 ENSMICG00000006494 #32 ENSMICG00000044813 SV2C (ENSMICG00000007347) #35 F2RL2 (ENSMICG00000036441) #36 IQGAP2 (ENSMICG00000007353) #37 F2R (ENSMICG00000029417) ##36 F2RL1 (ENSMICG00000032411) ##36 S100Z (ENSMICG00000026826) Mouse lemur MODERN SPECIES 13 ENSMICG00000043846 ENSMICG00000043690 ENSMICG00000047896 ENSMICG00000046192 ENSMICG00000046379 ENSMICG00000044126 ENSMICG00000042139 ENSMICG00000041584 ENSMICG00000047882 ENSMICG00000042036 ENSMICG00000045616 ENSMICG00000027352 ENSMICG00000046035 ENSMICG00000045426 AACS (ENSMICG00000046827) ENSMICG00000045473 #22 BRI3BP (ENSMICG00000047799) DHX37 (ENSMICG00000005216) ENSMICG00000045073 SCARB1 (ENSMICG00000005850) NCOR2 (ENSMICG00000006962) RFLNA (ENSMICG00000047134) ZNF664 (ENSMICG00000044061) CCDC92 (ENSMICG00000006578) DNAH10 (ENSMICG00000006529) ATP6V0A2 (ENSMICG00000006505) TCTN2 (ENSMICG00000006495) GTF2H3 (ENSMICG00000006482) EIF2B1 (ENSMICG00000006480) DDX55 (ENSMICG00000006477) TMED2 (ENSMICG00000038482) Lemuriformes_a ANCESTRAL SPECIES 43 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Coquerels sifaka MODERN SPECIES 999 MAP1B (ENSPCOG00000020907) MRPS27 (ENSPCOG00000028430) ENSPCOG00000018429 ZNF366 (ENSPCOG00000018335) #7 TNPO1 (ENSPCOG00000004254) #9 FCHO2 (ENSPCOG00000019242) #11 ENSPCOG00000022901 TMEM171 (ENSPCOG00000025688) #12 TMEM174 (ENSPCOG00000020420) #13 FOXD1 (ENSPCOG00000012192) ANKRA2 (ENSPCOG00000018380) #16 ARHGEF28 (ENSPCOG00000016965) #18 ENC1 (ENSPCOG00000026678) #19 HEXB (ENSPCOG00000017903) #20 GFM2 (ENSPCOG00000022606) #21 NSA2 (ENSPCOG00000016622) #22 FAM169A (ENSPCOG00000020536) #24 ANKRD31 (ENSPCOG00000017441) #27 HMGCR (ENSPCOG00000016696) #28 CERT1 (ENSPCOG00000016749) #29 POLK (ENSPCOG00000027526) #30 ANKDD1B (ENSPCOG00000020302) #31 POC5 (ENSPCOG00000025218) #32 SV2C (ENSPCOG00000018991) #35 F2RL2 (ENSPCOG00000018657) #36 IQGAP2 (ENSPCOG00000026521) #37 F2RL1 (ENSPCOG00000015685) ##36 S100Z (ENSPCOG00000005734) CRHBP (ENSPCOG00000026267) AGGF1 (ENSPCOG00000026723) PDE8B (ENSPCOG00000017117) Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 899 RBM5 (ENSPSMG00000014264) RBM6 (ENSPSMG00000014147) MON1A (ENSPSMG00000014075) MST1R (ENSPSMG00000013962) CAMKV (ENSPSMG00000013812) TRAIP (ENSPSMG00000013694) INKA1 (ENSPSMG00000013633) CDHR4 (ENSPSMG00000013628) IP6K1 (ENSPSMG00000013596) GMPPB (ENSPSMG00000013549) AMIGO3 (ENSPSMG00000013537) RNF123 (ENSPSMG00000013500) MST1 (ENSPSMG00000013406) APEH (ENSPSMG00000013353) BSN (ENSPSMG00000013291) ENSPSMG00000013281 #22 DAG1 (ENSPSMG00000013278) Greater bamboo lemur MODERN SPECIES 328 TNPO1 (ENSPSMG00000019130) #9 FCHO2 (ENSPSMG00000018928) #11 ENSPSMG00000018838 ENSPSMG00000018833 TMEM171 (ENSPSMG00000018827) #12 TMEM174 (ENSPSMG00000018820) #13 FOXD1 (ENSPSMG00000018815) ENSPSMG00000018809 ##15 ANKRA2 (ENSPSMG00000018804) #16 UTP15 (ENSPSMG00000018795) #17 ARHGEF28 (ENSPSMG00000018653) #18 ENSPSMG00000018410 ENC1 (ENSPSMG00000018408) #19 HEXB (ENSPSMG00000018387) #20 GFM2 (ENSPSMG00000018253) #21 ENSPSMG00000018156 #22 FAM169A (ENSPSMG00000018121) #24 GCNT4 (ENSPSMG00000018049) ENSPSMG00000018045 #27 Euarchontoglires_A ANCESTRAL SPECIES 8 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Glires ANCESTRAL SPECIES 7 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Lagomorpha ANCESTRAL SPECIES 139 ENSGT00390000007246 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 Rabbit DUPLICATION Rabbit DUPLICATION Rabbit MODERN SPECIES 453 ENSOCUG00000039485 MRPS27 (ENSOCUG00000007961) ZNF366 (ENSOCUG00000004571) #7 ENSOCUG00000022045 TNPO1 (ENSOCUG00000013318) #9 FCHO2 (ENSOCUG00000003283) #11 TMEM171 (ENSOCUG00000002668) #12 TMEM174 (ENSOCUG00000012170) #13 BTF3 (ENSOCUG00000024914) #15 ANKRA2 (ENSOCUG00000000615) #16 UTP15 (ENSOCUG00000000617) #17 ARHGEF28 (ENSOCUG00000000629) #18 ENC1 (ENSOCUG00000009228) #19 HEXB (ENSOCUG00000005341) #20 GFM2 (ENSOCUG00000005349) #21 ENSOCUG00000006536 #22 FAM169A (ENSOCUG00000006543) #24 ENSOCUG00000021397 Rabbit MODERN SPECIES 443 AHR (ENSOCUG00000003877) ENSOCUG00000009337 #22 AGR3 (ENSOCUG00000000402) AGR2 (ENSOCUG00000003578) BZW2 (ENSOCUG00000016419) ANKMY2 (ENSOCUG00000016409) LRRC72 (ENSOCUG00000016403) SOSTDC1 (ENSOCUG00000012541) ENSOCUG00000029329 CRPPA (ENSOCUG00000026591) ENSOCUG00000034809 ENSOCUG00000039575 MEOX2 (ENSOCUG00000026941) ENSOCUG00000034071 ENSOCUG00000031323 AGMO (ENSOCUG00000017586) DGKB (ENSOCUG00000014076) Rabbit MODERN SPECIES 12 ENSOCUG00000034672 ENSOCUG00000038735 ENSOCUG00000026727 ENSOCUG00000037228 ENSOCUG00000035244 GALC (ENSOCUG00000009309) GPR65 (ENSOCUG00000008519) ENSOCUG00000029629 KCNK10 (ENSOCUG00000015561) SPATA7 (ENSOCUG00000002033) PTPN21 (ENSOCUG00000002037) ZC3H14 (ENSOCUG00000015503) EML5 (ENSOCUG00000015515) TTC8 (ENSOCUG00000015555) FOXN3 (ENSOCUG00000004392) ENSOCUG00000027074 #22 EFCAB11 (ENSOCUG00000015498) ENSOCUG00000025758 TDP1 (ENSOCUG00000002106) KCNK13 (ENSOCUG00000005405) ENSOCUG00000006231 CALM1 (ENSOCUG00000011659) NRDE2 (ENSOCUG00000010083) ENSOCUG00000008905 RPS6KA5 (ENSOCUG00000008913) ENSOCUG00000036068 GPR68 (ENSOCUG00000013808) ENSOCUG00000003723 ENSOCUG00000035457 ENSOCUG00000021409 PPP4R3A (ENSOCUG00000017765) Pika MODERN SPECIES 4935 ENC1 (ENSOPRG00000001818) #19 HEXB (ENSOPRG00000001819) #20 GFM2 (ENSOPRG00000001846) #21 NSA2 (ENSOPRG00000001867) #22 ENSOPRG00000001885 #24 Rodentia ANCESTRAL SPECIES 7 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Rodentia_A ANCESTRAL SPECIES 7 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Sciuridae ANCESTRAL SPECIES 18 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Marmotini ANCESTRAL SPECIES 23 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Alpin marmot MODERN SPECIES 48 PTCD2 (ENSMMMG00000002539) ZNF366 (ENSMMMG00000002522) #7 ENSMMMG00000002514 TNPO1 (ENSMMMG00000002439) #9 FCHO2 (ENSMMMG00000002365) #11 TMEM171 (ENSMMMG00000002351) #12 TMEM174 (ENSMMMG00000002346) #13 ENSMMMG00000002304 ##15 ANKRA2 (ENSMMMG00000002249) #16 UTP15 (ENSMMMG00000002211) #17 ARHGEF28 (ENSMMMG00000002152) #18 ENC1 (ENSMMMG00000002129) #19 ENSMMMG00000002120 HEXB (ENSMMMG00000002087) #20 GFM2 (ENSMMMG00000001763) #21 NSA2 (ENSMMMG00000001722) #22 FAM169A (ENSMMMG00000001677) #24 GCNT4 (ENSMMMG00000001657) ENSMMMG00000001628 #27 HMGCR (ENSMMMG00000001547) #28 CERT1 (ENSMMMG00000001422) #29 POLK (ENSMMMG00000001203) #30 ANKDD1B (ENSMMMG00000001142) #31 POC5 (ENSMMMG00000000939) #32 SV2C (ENSMMMG00000000845) #35 F2RL2 (ENSMMMG00000000828) #36 IQGAP2 (ENSMMMG00000000750) #37 F2R (ENSMMMG00000000732) ##36 F2RL1 (ENSMMMG00000000723) ##36 S100Z (ENSMMMG00000000720) Marmotini_b ANCESTRAL SPECIES 92 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Arctic ground squirrel MODERN SPECIES 299 ENC1 (ENSUPAG00010004981) #19 HEXB (ENSUPAG00010004984) #20 GFM2 (ENSUPAG00010005333) #21 NSA2 (ENSUPAG00010005383) #22 FAM169A (ENSUPAG00010005409) #24 GCNT4 (ENSUPAG00010005440) ENSUPAG00010005442 #27 HMGCR (ENSUPAG00010005462) #28 ENSUPAG00010005498 #29 POLK (ENSUPAG00010005814) #30 ANKDD1B (ENSUPAG00010005945) #31 POC5 (ENSUPAG00010005963) #32 SV2C (ENSUPAG00010006006) #35 IQGAP2 (ENSUPAG00010006026) #37 F2RL2 (ENSUPAG00010006042) #36 F2R (ENSUPAG00010006053) ##36 F2RL1 (ENSUPAG00010006060) ##36 S100Z (ENSUPAG00010006063) CRHBP (ENSUPAG00010006069) Eurasian red squirrel MODERN SPECIES 15 ENSSVLG00005005210 ENSSVLG00005005227 TNPO1 (ENSSVLG00005005275) #9 FCHO2 (ENSSVLG00005005358) #11 TMEM171 (ENSSVLG00005005613) #12 TMEM174 (ENSSVLG00005005661) #13 FOXD1 (ENSSVLG00005005687) ENSSVLG00005005717 ##15 ANKRA2 (ENSSVLG00005005781) #16 UTP15 (ENSSVLG00005005813) #17 ARHGEF28 (ENSSVLG00005005963) #18 ENC1 (ENSSVLG00005006387) #19 ENSSVLG00005006420 #20 GFM2 (ENSSVLG00005006519) #21 ENSSVLG00005006579 NSA2 (ENSSVLG00005006610) #22 FAM169A (ENSSVLG00005006669) #24 GCNT4 (ENSSVLG00005006815) ANKRD31 (ENSSVLG00005006845) #27 HMGCR (ENSSVLG00005006942) #28 CERT1 (ENSSVLG00005007093) #29 ENSSVLG00005007250 POLK (ENSSVLG00005007352) #30 ANKDD1B (ENSSVLG00005007433) #31 POC5 (ENSSVLG00005007522) #32 ENSSVLG00005007604 SV2C (ENSSVLG00005007661) #35 IQGAP2 (ENSSVLG00005007881) #37 F2RL2 (ENSSVLG00005008481) #36 F2R (ENSSVLG00005008506) ##36 ENSSVLG00005008525 ##36 Hystricomorpha ANCESTRAL SPECIES 31 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389.h #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Naked mole-rat female MODERN SPECIES 7 RGR (ENSHGLG00000010499) ENSHGLG00000032139 CCSER2 (ENSHGLG00000008612) GRID1 (ENSHGLG00000009129) ENSHGLG00000007130 ENSHGLG00000006795 ENSHGLG00000045643 ENSHGLG00000001304 ##15 ENSHGLG00000000772 #16 UTP15 (ENSHGLG00000000745) #17 ARHGEF28 (ENSHGLG00000000602) #18 ENSHGLG00000040928 ENC1 (ENSHGLG00000000552) #19 Hexb (ENSHGLG00000000527) #20 GFM2 (ENSHGLG00000000419) #21 NSA2 (ENSHGLG00000000324) #22 ENSHGLG00000035328 #24 ENSHGLG00000032803 ENSHGLG00000000294 #29 ENSHGLG00000000270 #28 ANKRD31 (ENSHGLG00000000230) #27 ENSHGLG00000043427 ENSHGLG00000040348 ENSHGLG00000000135 ENSHGLG00000034320 ENSHGLG00000002129 #30 ENSHGLG00000036754 ENSHGLG00000002239 #31 ENSHGLG00000040666 ENSHGLG00000035363 ENSHGLG00000001390 Hystricomorpha_a ANCESTRAL SPECIES 72 ENSGT01100000263506.b.b ENSGT00940000155389.h #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Guinea pig MODERN SPECIES 163 ENSCPOG00000020216 TNPO1 (ENSCPOG00000003540) #9 FCHO2 (ENSCPOG00000005442) #11 TMEM171 (ENSCPOG00000019983) #12 TMEM174 (ENSCPOG00000002881) #13 ENSCPOG00000035195 ENSCPOG00000012832 ##15 ANKRA2 (ENSCPOG00000006571) #16 UTP15 (ENSCPOG00000006669) #17 ARHGEF28 (ENSCPOG00000006680) #18 ENC1 (ENSCPOG00000004353) #19 ENSCPOG00000023166 HEXB (ENSCPOG00000006324) #20 GFM2 (ENSCPOG00000006332) #21 NSA2 (ENSCPOG00000030702) #22 FAM169A (ENSCPOG00000025740) #24 Hystricomorpha_b ANCESTRAL SPECIES 95 ENSGT00940000155389.h #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 ENSGT00730000111121 Degu DUPLICATION Degu MODERN SPECIES 245 ENSODEG00000018607 ENSODEG00000000593 SOX11 (ENSODEG00000000568) CMPK2 (ENSODEG00000000539) RSAD2 (ENSODEG00000000506) RNF144A (ENSODEG00000000489) ID2 (ENSODEG00000000480) KIDINS220 (ENSODEG00000000415) MBOAT2 (ENSODEG00000000353) SNTG2 (ENSODEG00000000324) TPO (ENSODEG00000000292) TMEM18 (ENSODEG00000000266) ALKAL2 (ENSODEG00000000931) ACP1 (ENSODEG00000000890) ENSODEG00000000841 ENSODEG00000018660 #22 Degu MODERN SPECIES 303 ENSODEG00000000925 ENSODEG00000018693 ENSODEG00000000904 ENSODEG00000001578 AKAP9 (ENSODEG00000001339) CYP51A1 (ENSODEG00000001187) ENSODEG00000001141 #22 KRIT1 (ENSODEG00000001084) ANKIB1 (ENSODEG00000001042) ENSODEG00000000916 ENSODEG00000000896 PEX1 (ENSODEG00000001278) ENSODEG00000001236 ENSODEG00000001167 CDK6 (ENSODEG00000001138) ENSODEG00000001113 HEPACAM2 (ENSODEG00000001098) VPS50 (ENSODEG00000001066) CALCR (ENSODEG00000001037) ENSODEG00000001006 TFPI2 (ENSODEG00000000988) GNGT1 (ENSODEG00000000972) Long-tailed chinchilla MODERN SPECIES 132 TNPO1 (ENSCLAG00000016191) #9 FCHO2 (ENSCLAG00000009654) #11 TMEM171 (ENSCLAG00000009754) #12 TMEM174 (ENSCLAG00000009686) #13 BTF3 (ENSCLAG00000014499) #15 ANKRA2 (ENSCLAG00000013134) #16 UTP15 (ENSCLAG00000016531) #17 ARHGEF28 (ENSCLAG00000011926) #18 ENC1 (ENSCLAG00000010345) #19 HEXB (ENSCLAG00000016006) #20 GFM2 (ENSCLAG00000013440) #21 NSA2 (ENSCLAG00000010179) #22 FAM169A (ENSCLAG00000009619) #24 ENSCLAG00000011385 GCNT4 (ENSCLAG00000010436) ENSCLAG00000009641 ANKRD31 (ENSCLAG00000011065) #27 HMGCR (ENSCLAG00000010132) #28 CERT1 (ENSCLAG00000011527) #29 POLK (ENSCLAG00000011236) #30 ANKDD1B (ENSCLAG00000010494) #31 POC5 (ENSCLAG00000009830) #32 SV2C (ENSCLAG00000013949) #35 F2RL2 (ENSCLAG00000012739) #36 IQGAP2 (ENSCLAG00000011435) #37 F2RL1 (ENSCLAG00000010304) ##36 S100Z (ENSCLAG00000010354) Rodentia_B ANCESTRAL SPECIES ENSGT00390000018706.m.b.a #22 Myomorpha ANCESTRAL SPECIES ENSGT00390000018706.m.b.a #22 Muroidea ANCESTRAL SPECIES ENSGT00390000018706.m.b.a #22 Muroidea_A ANCESTRAL SPECIES ENSGT00390000018706.m.b.a #22 Cricetidae ANCESTRAL SPECIES 11 ENSGT00390000007246 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.a.b #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Cricetidae_B ANCESTRAL SPECIES 40 ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00390000008557 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Prairie vole MODERN SPECIES 6 Zfp366 (ENSMOCG00000020994) #7 ENSMOCG00000020264 Tnpo1 (ENSMOCG00000009301) #9 Fcho2 (ENSMOCG00000018919) #11 Tmem171 (ENSMOCG00000004565) #12 Tmem174 (ENSMOCG00000013056) #13 Foxd1 (ENSMOCG00000005673) Btf3 (ENSMOCG00000011394) ##15 ENSMOCG00000012385 Ankra2 (ENSMOCG00000014365) #16 Utp15 (ENSMOCG00000000493) #17 Arhgef28 (ENSMOCG00000017301) #18 Enc1 (ENSMOCG00000022713) #19 Hexb (ENSMOCG00000005839) #20 ENSMOCG00000004402 #21 ENSMOCG00000012395 #22 Fam169a (ENSMOCG00000014172) #24 Gcnt4 (ENSMOCG00000017465) Ankrd31 (ENSMOCG00000009502) #27 ENSMOCG00000019171 Hmgcr (ENSMOCG00000008012) #28 ENSMOCG00000019480 #29 Polk (ENSMOCG00000016143) #30 ENSMOCG00000014817 Ankdd1b (ENSMOCG00000003243) #31 Poc5 (ENSMOCG00000009038) #32 Sv2c (ENSMOCG00000021524) #35 Iqgap2 (ENSMOCG00000002734) #37 F2rl2 (ENSMOCG00000008663) #36 F2r (ENSMOCG00000012362) ##36 F2rl1 (ENSMOCG00000013582) ##36 Cricetinae ANCESTRAL SPECIES 7 ENSGT00940000155897 ENSGT00390000007246 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.a.b #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Chinese hamster chok1gshd MODERN SPECIES 1 Tnpo1 (ENSCGRG00001016580) #9 Fcho2 (ENSCGRG00001013782) #11 Tmem171 (ENSCGRG00001016096) #12 Tmem174 (ENSCGRG00001011496) #13 Foxd1 (ENSCGRG00001010743) Btf3 (ENSCGRG00001009745) ##15 ENSCGRG00001008466 Ankra2 (ENSCGRG00001014449) #16 Utp15 (ENSCGRG00001013836) #17 Arhgef28 (ENSCGRG00001018993) #18 ENSCGRG00001017370 Enc1 (ENSCGRG00001009896) #19 ENSCGRG00001021658 Hexb (ENSCGRG00001020320) #20 Gfm2 (ENSCGRG00001022802) #21 ENSCGRG00001012819 #22 Fam169a (ENSCGRG00001021297) #24 Gcnt4 (ENSCGRG00001008293) ENSCGRG00001008489 ENSCGRG00001014554 Ankrd31 (ENSCGRG00001018162) #27 HMGCR (ENSCGRG00001016870) #28 Cert1 (ENSCGRG00001020451) #29 Polk (ENSCGRG00001013007) #30 ENSCGRG00001012277 Ankdd1b (ENSCGRG00001016471) #31 Poc5 (ENSCGRG00001015817) #32 Sv2c (ENSCGRG00001015770) #35 F2rl2 (ENSCGRG00001014616) #36 Iqgap2 (ENSCGRG00001019858) #37 F2r (ENSCGRG00001016531) ##36 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000018706.m.b.a #22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000018706.m.b.a #22 Artiodactyla ANCESTRAL SPECIES ENSGT00390000018706.m.b.a #22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000018706.m.b.a #22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000018706.m.b.a #22 Pecora ANCESTRAL SPECIES ENSGT00390000018706.m.b.a #22 Percora_a ANCESTRAL SPECIES ENSGT00390000018706.m.b.a #22 Bovidae ANCESTRAL SPECIES ENSGT00390000018706.m.b.a #22 Bovinae ANCESTRAL SPECIES ENSGT00390000018706.m.b.a #22 American bison MODERN SPECIES 3058 PPP1R9A (ENSBBBG00000019136) PON1 (ENSBBBG00000019206) PON3 (ENSBBBG00000019221) PON2 (ENSBBBG00000019245) ASB4 (ENSBBBG00000004982) ENSBBBG00000004984 PDK4 (ENSBBBG00000019269) DYNC1I1 (ENSBBBG00000019384) SLC25A13 (ENSBBBG00000008948) ENSBBBG00000008660 SEM1 (ENSBBBG00000005233) ENSBBBG00000019472 DLX6 (ENSBBBG00000005246) DLX5 (ENSBBBG00000009075) SDHAF3 (ENSBBBG00000019488) ENSBBBG00000019491 #22 TAC1 (ENSBBBG00000019522) ASNS (ENSBBBG00000005315) C1GALT1 (ENSBBBG00000019593) COL28A1 (ENSBBBG00000019641) MIOS (ENSBBBG00000019669) RPA3 (ENSBBBG00000019682) UMAD1 (ENSBBBG00000019686) GLCCI1 (ENSBBBG00000019699) ICA1 (ENSBBBG00000005347) NXPH1 (ENSBBBG00000019763) Camelidae ANCESTRAL SPECIES ENSGT00390000018706.m.b.a #22 Arabian camel MODERN SPECIES 2 ENSCDRG00005007538 ENSCDRG00005007470 ENSCDRG00005007440 ENSCDRG00005007364 ZNF25 (ENSCDRG00005007335) ENSCDRG00005007323 ZNF248 (ENSCDRG00005007295) BMS1 (ENSCDRG00005007208) RET (ENSCDRG00005007057) CSGALNACT2 (ENSCDRG00005006990) RASGEF1A (ENSCDRG00005006869) ENSCDRG00005006816 ENSCDRG00005006804 ZNF239 (ENSCDRG00005018031) ENSCDRG00005018008 ENSCDRG00005017996 #22 ZNF32 (ENSCDRG00005017982) CXCL12 (ENSCDRG00005017945) TMEM72 (ENSCDRG00005017856) DEPP1 (ENSCDRG00005017834) RASSF4 (ENSCDRG00005017733) ZNF22 (ENSCDRG00005017716) ENSCDRG00005017703 ALOX5 (ENSCDRG00005017469) MARCHF8 (ENSCDRG00005017390) ZFAND4 (ENSCDRG00005017328) ENSCDRG00005016975 ENSCDRG00005016934 NCOA4 (ENSCDRG00005016824) TIMM23B (ENSCDRG00005016763) PARG (ENSCDRG00005016711) Atlantogenata ANCESTRAL SPECIES ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Xenarthra ANCESTRAL SPECIES 476 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831.`b #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 Armadillo MODERN SPECIES 333 ANKRA2 (ENSDNOG00000043151) #16 UTP15 (ENSDNOG00000043156) #17 ARHGEF28 (ENSDNOG00000046105) #18 ENC1 (ENSDNOG00000009564) #19 HEXB (ENSDNOG00000005105) #20 GFM2 (ENSDNOG00000005118) #21 NSA2 (ENSDNOG00000010615) #22 FAM169A (ENSDNOG00000010638) #24 ENSDNOG00000047691 GCNT4 (ENSDNOG00000003131) ENSDNOG00000047661 #27 Afrotheria ANCESTRAL SPECIES 12 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Tenrec MODERN SPECIES 2989 HEXB (ENSETEG00000004085) #20 GFM2 (ENSETEG00000004090) #21 NSA2 (ENSETEG00000004095) #22 ENSETEG00000004097 ##24 Afrotheria_a ANCESTRAL SPECIES 12 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Hyrax MODERN SPECIES 5502 ENC1 (ENSPCAG00000015183) #19 ENSPCAG00000015198 #20 GFM2 (ENSPCAG00000015284) #21 NSA2 (ENSPCAG00000015413) #22 FAM169A (ENSPCAG00000015446) #24 Elephant DUPLICATION Elephant MODERN SPECIES 602 CALM1 (ENSLAFG00000002905) NRDE2 (ENSLAFG00000004966) PSMC1 (ENSLAFG00000004956) KCNK13 (ENSLAFG00000004953) TDP1 (ENSLAFG00000015781) EFCAB11 (ENSLAFG00000015776) FOXN3 (ENSLAFG00000016005) TTC8 (ENSLAFG00000003070) EML5 (ENSLAFG00000003001) ZC3H14 (ENSLAFG00000002998) PTPN21 (ENSLAFG00000009581) SPATA7 (ENSLAFG00000012147) KCNK10 (ENSLAFG00000018089) GPR65 (ENSLAFG00000014358) GALC (ENSLAFG00000005617) ENSLAFG00000027812 #22 SEL1L (ENSLAFG00000001885) STON2 (ENSLAFG00000012054) GTF2A1 (ENSLAFG00000001100) TSHR (ENSLAFG00000001097) CEP128 (ENSLAFG00000017419) ENSLAFG00000025907 ENSLAFG00000006734 ENSLAFG00000030591 ADCK1 (ENSLAFG00000007008) SNW1 (ENSLAFG00000003482) ALKBH1 (ENSLAFG00000003475) SPTLC2 (ENSLAFG00000031915) ENSLAFG00000005656 AHSA1 (ENSLAFG00000005651) VIPAS39 (ENSLAFG00000005645) Elephant MODERN SPECIES 526 MRPS27 (ENSLAFG00000004110) PTCD2 (ENSLAFG00000004115) ZNF366 (ENSLAFG00000030138) #7 ENSLAFG00000028707 TNPO1 (ENSLAFG00000011796) #9 FCHO2 (ENSLAFG00000011804) #11 TMEM171 (ENSLAFG00000015910) #12 TMEM174 (ENSLAFG00000011713) #13 ENSLAFG00000032656 #15 ANKRA2 (ENSLAFG00000012578) #16 UTP15 (ENSLAFG00000002596) #17 ARHGEF28 (ENSLAFG00000011204) #18 ENC1 (ENSLAFG00000007895) #19 HEXB (ENSLAFG00000018570) #20 GFM2 (ENSLAFG00000018575) #21 ENSLAFG00000009910 #22 FAM169A (ENSLAFG00000009907) #24 GCNT4 (ENSLAFG00000027464) ENSLAFG00000026415 #27 HMGCR (ENSLAFG00000013291) #28 CERT1 (ENSLAFG00000013294) #29 POLK (ENSLAFG00000013297) #30 ANKDD1B (ENSLAFG00000020937) #31 POC5 (ENSLAFG00000014703) #32 SV2C (ENSLAFG00000003003) #35 IQGAP2 (ENSLAFG00000000760) #37 F2RL2 (ENSLAFG00000029045) #36 F2R (ENSLAFG00000003741) ##36 F2RL1 (ENSLAFG00000001287) ##36 S100Z (ENSLAFG00000013035) CRHBP (ENSLAFG00000013037) Marsupialia ANCESTRAL SPECIES 1 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000170332 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Opossum MODERN SPECIES 2 ENSMODG00000043355 TNPO1 (ENSMODG00000001721) #9 FCHO2 (ENSMODG00000001742) #11 TMEM171 (ENSMODG00000001747) #12 TMEM174 (ENSMODG00000001756) #13 FOXD1 (ENSMODG00000027859) BTF3 (ENSMODG00000038301) #15 ENSMODG00000001765 ANKRA2 (ENSMODG00000001777) #16 UTP15 (ENSMODG00000001789) #17 ARHGEF28 (ENSMODG00000001838) #18 ENSMODG00000029229 ENC1 (ENSMODG00000025244) #19 HEXB (ENSMODG00000001872) #20 GFM2 (ENSMODG00000001892) #21 NSA2 (ENSMODG00000001900) #22 FAM169A (ENSMODG00000001914) #24 ENSMODG00000002022 HMGCR (ENSMODG00000002057) #28 CERT1 (ENSMODG00000002107) #29 POLK (ENSMODG00000002131) #30 ANKDD1B (ENSMODG00000002967) #31 ENSMODG00000002994 #32 SV2C (ENSMODG00000003099) #35 LNPEP (ENSMODG00000015542) ENSMODG00000041411 ENSMODG00000014482 LIX1 (ENSMODG00000015547) ENSMODG00000047347 ENSMODG00000015548 ENSMODG00000049761 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000170332 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Diprotodontia ANCESTRAL SPECIES 1 ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.a ##15 ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000170332 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Diprotodontia_a ANCESTRAL SPECIES ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.a ##15 ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000170332 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 koala MODERN SPECIES 73 PTCD2 (ENSPCIG00000029047) ZNF366 (ENSPCIG00000036889) #7 ENSPCIG00000026078 TNPO1 (ENSPCIG00000026080) #9 FCHO2 (ENSPCIG00000026090) #11 TMEM171 (ENSPCIG00000026098) #12 TMEM174 (ENSPCIG00000026099) #13 FOXD1 (ENSPCIG00000026101) ENSPCIG00000026102 ##15 ANKRA2 (ENSPCIG00000007784) #16 UTP15 (ENSPCIG00000027448) #17 ARHGEF28 (ENSPCIG00000006933) #18 ENC1 (ENSPCIG00000010266) #19 HEXB (ENSPCIG00000010267) #20 GFM2 (ENSPCIG00000020810) #21 NSA2 (ENSPCIG00000010269) #22 FAM169A (ENSPCIG00000010270) #24 GCNT4 (ENSPCIG00000015727) ENSPCIG00000015721 ENSPCIG00000027474 HMGCR (ENSPCIG00000027473) #28 CERT1 (ENSPCIG00000027317) #29 POLK (ENSPCIG00000027316) #30 ENSPCIG00000027312 #31 ENSPCIG00000027308 #32 SV2C (ENSPCIG00000027306) #35 F2RL2 (ENSPCIG00000029189) #36 IQGAP2 (ENSPCIG00000028736) #37 F2R (ENSPCIG00000002013) ##36 F2RL1 (ENSPCIG00000002046) ##36 S100Z (ENSPCIG00000036527) Common wonbat MODERN SPECIES 1013 MRPS27 (ENSVURG00010018577) PTCD2 (ENSVURG00010018581) ZNF366 (ENSVURG00010018593) #7 ENSVURG00010018601 TNPO1 (ENSVURG00010018621) #9 FCHO2 (ENSVURG00010018663) #11 TMEM171 (ENSVURG00010018704) #12 TMEM174 (ENSVURG00010018709) #13 BTF3 (ENSVURG00010018724) #15 ANKRA2 (ENSVURG00010018736) #16 UTP15 (ENSVURG00010018749) #17 ARHGEF28 (ENSVURG00010018793) #18 ENC1 (ENSVURG00010018828) #19 HEXB (ENSVURG00010018833) #20 GFM2 (ENSVURG00010018838) #21 NSA2 (ENSVURG00010018849) #22 FAM169A (ENSVURG00010018855) #24 GCNT4 (ENSVURG00010018863) ENSVURG00010018890 Tasmanian devil MODERN SPECIES PTCD2 (ENSSHAG00000003833) ZNF366 (ENSSHAG00000004351) #7 ENSSHAG00000006009 TNPO1 (ENSSHAG00000007120) #9 FCHO2 (ENSSHAG00000008845) #11 TMEM171 (ENSSHAG00000009931) #12 TMEM174 (ENSSHAG00000024801) #13 FOXD1 (ENSSHAG00000024478) BTF3 (ENSSHAG00000026632) #15 ANKRA2 (ENSSHAG00000013309) #16 UTP15 (ENSSHAG00000013388) #17 ARHGEF28 (ENSSHAG00000014463) #18 ENC1 (ENSSHAG00000017407) #19 HEXB (ENSSHAG00000017520) #20 GFM2 (ENSSHAG00000017593) #21 NSA2 (ENSSHAG00000017654) #22 FAM169A (ENSSHAG00000017681) #24 GCNT4 (ENSSHAG00000018019) ENSSHAG00000018123 HMGCR (ENSSHAG00000004177) #28 CERT1 (ENSSHAG00000004954) #29 POLK (ENSSHAG00000006899) #30 ANKDD1B (ENSSHAG00000028889) #31 POC5 (ENSSHAG00000008712) #32 SV2C (ENSSHAG00000011331) #35 F2RL2 (ENSSHAG00000028606) #36 IQGAP2 (ENSSHAG00000001152) #37 F2R (ENSSHAG00000009153) ##36 F2RL1 (ENSSHAG00000008088) ##36 S100Z (ENSSHAG00000028739) CRHBP (ENSSHAG00000006864) Theria ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Eutheria ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Eulipotyphla ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Common shrew MODERN SPECIES 13004 ENSSARG00000014334 ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Pecora ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Percora_a ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Bovidae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Caprinae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Goat MODERN SPECIES 29 NAP1L2 (ENSCHIG00000016151) ENSCHIG00000020667 ENSCHIG00000006283 CHIC1 (ENSCHIG00000016513) ENSCHIG00000001275 ENSCHIG00000021839 ZCCHC13 (ENSCHIG00000019132) SLC16A2 (ENSCHIG00000015992) RLIM (ENSCHIG00000019610) NEXMIF (ENSCHIG00000014641) ABCB7 (ENSCHIG00000005807) ZDHHC15 (ENSCHIG00000012700) MAGEE2 (ENSCHIG00000007901) HDX (ENSCHIG00000008366) ENSCHIG00000012493 ENSCHIG00000004429 ##22 ENSCHIG00000016967 ENSCHIG00000004218 POU3F4 (ENSCHIG00000002076) CYLC1 (ENSCHIG00000015857) ENSCHIG00000011958 ENSCHIG00000016036 CHM (ENSCHIG00000022478) POF1B (ENSCHIG00000020154) ZNF711 (ENSCHIG00000011383) ENSCHIG00000018015 UPRT (ENSCHIG00000016731) ENSCHIG00000011572 ENSCHIG00000017553 PGK1 (ENSCHIG00000009440) ENSCHIG00000022832 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Carnivora ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Caniformia ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Mustelinae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Ferret DUPLICATION Ferret MODERN SPECIES 235 ENSMPUG00000010926 CHSY1 (ENSMPUG00000010931) SELENOS (ENSMPUG00000010935) SNRPA1 (ENSMPUG00000010938) PCSK6 (ENSMPUG00000010974) TM2D3 (ENSMPUG00000010985) TARS3 (ENSMPUG00000011032) TJP1 (ENSMPUG00000011043) ENTREP2 (ENSMPUG00000011061) APBA2 (ENSMPUG00000011067) MCEE (ENSMPUG00000011083) MPHOSPH10 (ENSMPUG00000011089) FAN1 (ENSMPUG00000011100) MTMR10 (ENSMPUG00000011109) TRPM1 (ENSMPUG00000011117) ENSMPUG00000011297 ##22 ENSMPUG00000011299 OTUD7A (ENSMPUG00000011304) Ferret MODERN SPECIES 329 ENSMPUG00000011233 ENSMPUG00000011243 OR5K4 (ENSMPUG00000019971) ENSMPUG00000019973 ENSMPUG00000019975 CLDND1 (ENSMPUG00000011253) GPR15 (ENSMPUG00000019977) CPOX (ENSMPUG00000011268) ST3GAL6 (ENSMPUG00000011272) DCBLD2 (ENSMPUG00000011279) ENSMPUG00000011287 ##22 COL8A1 (ENSMPUG00000011313) FILIP1L (ENSMPUG00000011317) CMSS1 (ENSMPUG00000011324) ENSMPUG00000011369 TBC1D23 (ENSMPUG00000011445) NIT2 (ENSMPUG00000011450) TOMM70 (ENSMPUG00000011454) LNP1 (ENSMPUG00000011460) TMEM45A (ENSMPUG00000011465) ADGRG7 (ENSMPUG00000011468) TFG (ENSMPUG00000011505) ABI3BP (ENSMPUG00000011530) IMPG2 (ENSMPUG00000011680) SENP7 (ENSMPUG00000011687) ENSMPUG00000011693 Euarchontoglires ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Tree shrew DUPLICATION Tree shrew MODERN SPECIES 8855 ENSTBEG00000007470 ##22 Tree shrew MODERN SPECIES 7798 ENSTBEG00000009839 ##22 Glires ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Rodentia_B ANCESTRAL SPECIES 4 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.b ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Myomorpha DUPLICATION Myomorpha DUPLICATION Myomorpha ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.e.a ##22 Lesser Egyptian jerboa MODERN SPECIES 157 Slc38a2 (ENSJJAG00000013665) Slc38a1 (ENSJJAG00000013537) ENSJJAG00000012055 Scaf11 (ENSJJAG00000009595) ENSJJAG00000003064 ENSJJAG00000020460 ENSJJAG00000018413 Ano6 (ENSJJAG00000015358) Dbx2 (ENSJJAG00000014537) ENSJJAG00000011568 Nell2 (ENSJJAG00000008540) Tmem117 (ENSJJAG00000011809) Twf1 (ENSJJAG00000010007) Irak4 (ENSJJAG00000006725) Pus7l (ENSJJAG00000002299) ENSJJAG00000020931 ##22 Adamts20 (ENSJJAG00000019070) Muroidea ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.e.a ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.e.a ##22 Cricetidae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.e.a ##22 Cricetinae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.e.a ##22 Golden Hamster MODERN SPECIES 644 Rasal2 (ENSMAUG00000000816) Cryzl2 (ENSMAUG00000012366) ENSMAUG00000019197 Sec16b (ENSMAUG00000001343) ENSMAUG00000011275 Brinp2 (ENSMAUG00000016427) Astn1 (ENSMAUG00000021977) Pappa2 (ENSMAUG00000011215) Cop1 (ENSMAUG00000001871) Tnr (ENSMAUG00000000637) 4930523C07Rik (ENSMAUG00000016508) Tnn (ENSMAUG00000014939) Mrps14 (ENSMAUG00000018062) ENSMAUG00000015678 ENSMAUG00000021252 ENSMAUG00000009533 ##22 Rc3h1 (ENSMAUG00000020864) Serpinc1 (ENSMAUG00000019496) ENSMAUG00000018191 Dars2 (ENSMAUG00000002392) Klhl20 (ENSMAUG00000020502) ENSMAUG00000000878 Ankrd45 (ENSMAUG00000001353) Tex50 (ENSMAUG00000007631) ENSMAUG00000012265 Tnfsf4 (ENSMAUG00000012037) Tnfsf18 (ENSMAUG00000011424) Fasl (ENSMAUG00000008049) Suco (ENSMAUG00000007691) 4930558K02Rik (ENSMAUG00000022155) Pigc (ENSMAUG00000020179) Myomorpha ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.e.b ##22 Lesser Egyptian jerboa MODERN SPECIES 42 B4galnt1 (ENSJJAG00000021764) ENSJJAG00000008739 Os9 (ENSJJAG00000011446) Agap2 (ENSJJAG00000012355) Marchf9 (ENSJJAG00000000800) Tspan31 (ENSJJAG00000011792) ENSJJAG00000005635 Cyp27b1 (ENSJJAG00000016596) Mettl1 (ENSJJAG00000014500) Eef1akmt3 (ENSJJAG00000012184) Tsfm (ENSJJAG00000012907) Avil (ENSJJAG00000016587) Ctdsp2 (ENSJJAG00000017246) Lrig3 (ENSJJAG00000006798) ENSJJAG00000003685 ENSJJAG00000011962 ##22 ENSJJAG00000012520 Tafa2 (ENSJJAG00000018933) ENSJJAG00000020160 Mon2 (ENSJJAG00000015619) Ppm1h (ENSJJAG00000017676) Avpr1a (ENSJJAG00000017832) Rxylt1 (ENSJJAG00000010786) Srgap1 (ENSJJAG00000013024) ENSJJAG00000014260 D930020B18Rik (ENSJJAG00000015499) ENSJJAG00000019671 Tbk1 (ENSJJAG00000022454) Rassf3 (ENSJJAG00000013708) Gns (ENSJJAG00000023736) ENSJJAG00000023973 Myomorpha ANCESTRAL SPECIES 5 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.b.f ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Muroidea ANCESTRAL SPECIES 4 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.b.f ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Upper Galilee mountains blind mole rat MODERN SPECIES 671 Enc1 (ENSNGAG00000014528) #19 Hexb (ENSNGAG00000014968) #20 Gfm2 (ENSNGAG00000013586) #21 Nsa2 (ENSNGAG00000000080) ##22 Fam169a (ENSNGAG00000000337) #24 Gcnt4 (ENSNGAG00000010542) ENSNGAG00000011054 #27 Hmgcr (ENSNGAG00000000531) #28 Cert1 (ENSNGAG00000005295) #29 Muroidea_A ANCESTRAL SPECIES 11 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.b.f ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Murinae DUPLICATION Murinae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.f.a ##22 Rat MODERN SPECIES 15 Dmac1 (ENSRNOG00000023946) Ptprd (ENSRNOG00000005711) Snurf-ps2 (ENSRNOG00000022595) RGD1563375 (ENSRNOG00000065031) ENSRNOG00000065765 Tyrp1 (ENSRNOG00000029318) Lurap1l (ENSRNOG00000033740) RGD1565987 (ENSRNOG00000062659) LOC120102902 (ENSRNOG00000065656) Mpdz (ENSRNOG00000007894) Nfib (ENSRNOG00000009795) Zdhhc21 (ENSRNOG00000010484) Cer1 (ENSRNOG00000010518) Frem1 (ENSRNOG00000022309) Ttc39b (ENSRNOG00000042603) AABR07049043.1 (ENSRNOG00000047278) ##22 Snapc3 (ENSRNOG00000010825) Psip1 (ENSRNOG00000011498) AABR07049060.1 (ENSRNOG00000033445) ENSRNOG00000064241 LOC120102904 (ENSRNOG00000067108) Bnc2 (ENSRNOG00000006553) Cntln (ENSRNOG00000043151) Sh3gl2 (ENSRNOG00000006761) Adamtsl1 (ENSRNOG00000006956) Saxo1 (ENSRNOG00000048197) Rraga (ENSRNOG00000007051) Haus6 (ENSRNOG00000046028) Plin2 (ENSRNOG00000007060) Dennd4c (ENSRNOG00000008036) Rps6 (ENSRNOG00000007663) Murinae ANCESTRAL SPECIES 24 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.b.f.b ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Mus ANCESTRAL SPECIES 22 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.b.f.b ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Mus_A ANCESTRAL SPECIES 14 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.b.f.b ##22 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00860000136215 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Mus_B ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.f.b ##22 Mouse MODERN SPECIES 4 Zfp366 (ENSMUSG00000050919) #7 H2bl1 (ENSMUSG00000045022) Tnpo1 (ENSMUSG00000009470) #9 Fcho2 (ENSMUSG00000041685) #11 Tmem171 (ENSMUSG00000052485) #12 Tmem174 (ENSMUSG00000046082) #13 Foxd1 (ENSMUSG00000078302) Btf3 (ENSMUSG00000021660) ##15 Ankra2 (ENSMUSG00000021661) #16 Utp15 (ENSMUSG00000041747) #17 Arhgef28 (ENSMUSG00000021662) #18 Rps18-ps6 (ENSMUSG00000069117) Enc1 (ENSMUSG00000041773) #19 Hexb (ENSMUSG00000021665) #20 Gfm2 (ENSMUSG00000021666) #21 Nsa2 (ENSMUSG00000060739) ##22 Gm6169 (ENSMUSG00000057762) Fam169a (ENSMUSG00000041817) #24 1700029F12Rik (ENSMUSG00000052075) Gcnt4 (ENSMUSG00000091387) Ankrd31 (ENSMUSG00000109561) #27 Hmgcr (ENSMUSG00000021670) #28 Cert1 (ENSMUSG00000021669) #29 Polk (ENSMUSG00000021668) #30 Ankdd1b (ENSMUSG00000047117) #31 Poc5 (ENSMUSG00000021671) #32 Btf3l4b (ENSMUSG00000114133) Sv2c (ENSMUSG00000051111) #35 F2rl2 (ENSMUSG00000021675) #36 Iqgap2 (ENSMUSG00000021676) #37 F2r (ENSMUSG00000048376) ##36 Ryukyu mouse MODERN SPECIES 4 Zfp366 (MGP_CAROLIEiJ_G0018828) #7 H2bl1 (MGP_CAROLIEiJ_G0018827) Tnpo1 (MGP_CAROLIEiJ_G0018826) #9 Fcho2 (MGP_CAROLIEiJ_G0018825) #11 Tmem171 (MGP_CAROLIEiJ_G0018824) #12 Tmem174 (MGP_CAROLIEiJ_G0018823) #13 Foxd1 (MGP_CAROLIEiJ_G0018822) Btf3 (MGP_CAROLIEiJ_G0018821) ##15 MGP_CAROLIEiJ_G0018820 Ankra2 (MGP_CAROLIEiJ_G0018819) #16 Utp15 (MGP_CAROLIEiJ_G0018818) #17 Arhgef28 (MGP_CAROLIEiJ_G0018817) #18 Enc1 (MGP_CAROLIEiJ_G0018816) #19 Hexb (MGP_CAROLIEiJ_G0018815) #20 Gfm2 (MGP_CAROLIEiJ_G0018814) #21 Nsa2 (MGP_CAROLIEiJ_G0018813) ##22 Fam169a (MGP_CAROLIEiJ_G0018812) #24 1700029F12Rik (MGP_CAROLIEiJ_G0018811) Gcnt4 (MGP_CAROLIEiJ_G0018810) MGP_CAROLIEiJ_G0018809 #27 Hmgcr (MGP_CAROLIEiJ_G0018808) #28 Cert1 (MGP_CAROLIEiJ_G0018807) #29 MGP_CAROLIEiJ_G0018806 Polk (MGP_CAROLIEiJ_G0018805) #30 Ankdd1b (MGP_CAROLIEiJ_G0018804) #31 Poc5 (MGP_CAROLIEiJ_G0018803) #32 Sv2c (MGP_CAROLIEiJ_G0018802) #35 F2rl2 (MGP_CAROLIEiJ_G0018801) #36 Iqgap2 (MGP_CAROLIEiJ_G0018800) #37 F2r (MGP_CAROLIEiJ_G0018799) ##36 F2rl1 (MGP_CAROLIEiJ_G0018798) ##36 Shrew mouse MODERN SPECIES 2 Zfp366 (MGP_PahariEiJ_G0015903) #7 H2bl1 (MGP_PahariEiJ_G0015902) Tnpo1 (MGP_PahariEiJ_G0015901) #9 Fcho2 (MGP_PahariEiJ_G0015900) #11 Tmem171 (MGP_PahariEiJ_G0015899) #12 Tmem174 (MGP_PahariEiJ_G0015898) #13 Foxd1 (MGP_PahariEiJ_G0015897) Btf3 (MGP_PahariEiJ_G0015896) ##15 MGP_PahariEiJ_G0015895 Ankra2 (MGP_PahariEiJ_G0015894) #16 Utp15 (MGP_PahariEiJ_G0015893) #17 Arhgef28 (MGP_PahariEiJ_G0015892) #18 Enc1 (MGP_PahariEiJ_G0015891) #19 Hexb (MGP_PahariEiJ_G0015890) #20 Gfm2 (MGP_PahariEiJ_G0015889) #21 Nsa2 (MGP_PahariEiJ_G0015888) ##22 Fam169a (MGP_PahariEiJ_G0015887) #24 Gcnt4 (MGP_PahariEiJ_G0015886) Hmgcr (MGP_PahariEiJ_G0015885) #28 Cert1 (MGP_PahariEiJ_G0015884) #29 MGP_PahariEiJ_G0015883 Polk (MGP_PahariEiJ_G0015882) #30 Ankdd1b (MGP_PahariEiJ_G0015881) #31 Poc5 (MGP_PahariEiJ_G0015880) #32 Sv2c (MGP_PahariEiJ_G0015879) #35 F2rl2 (MGP_PahariEiJ_G0015878) #36 Iqgap2 (MGP_PahariEiJ_G0015877) #37 F2r (MGP_PahariEiJ_G0015876) ##36 F2rl1 (MGP_PahariEiJ_G0015875) ##36 S100z (MGP_PahariEiJ_G0015874) Crhbp (MGP_PahariEiJ_G0015873) Rat MODERN SPECIES 11 Zfp366 (ENSRNOG00000017249) #7 LOC684444 (ENSRNOG00000045818) Tnpo1 (ENSRNOG00000014999) #9 Fcho2 (ENSRNOG00000015334) #11 Tmem171 (ENSRNOG00000015449) #12 Tmem174 (ENSRNOG00000015472) #13 Foxd1 (ENSRNOG00000043332) Btf3 (ENSRNOG00000016912) ##15 Gm21976 (ENSRNOG00000068123) LOC108348276 (ENSRNOG00000048118) #16 Utp15 (ENSRNOG00000016591) #17 Arhgef28 (ENSRNOG00000016544) #18 Enc1 (ENSRNOG00000016541) #19 Hexb (ENSRNOG00000025274) #20 Gfm2 (ENSRNOG00000025285) #21 Nsa2 (ENSRNOG00000016530) ##22 Fam169a (ENSRNOG00000016505) #24 Gcnt4 (ENSRNOG00000064612) Ankrd31 (ENSRNOG00000025321) #27 Hmgcr (ENSRNOG00000016122) #28 Cert1 (ENSRNOG00000015686) #29 ENSRNOG00000067644 Polk (ENSRNOG00000060626) #30 Ankdd1b (ENSRNOG00000025377) #31 Poc5 (ENSRNOG00000018193) #32 AABR07007744.2 (ENSRNOG00000060714) Sv2c (ENSRNOG00000018094) #35 F2rl2 (ENSRNOG00000018054) #36 Iqgap2 (ENSRNOG00000025406) #37 F2r (ENSRNOG00000048043) ##36 AABR07007730.1 (ENSRNOG00000018045) Cricetidae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.f ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.f ##22 Northern American deer mouse MODERN SPECIES 6 Ptcd2 (ENSPEMG00000000884) Zfp366 (ENSPEMG00000016769) #7 H2bl1 (ENSPEMG00000028641) Tnpo1 (ENSPEMG00000007444) #9 Fcho2 (ENSPEMG00000013363) #11 Tmem171 (ENSPEMG00000007432) #12 Tmem174 (ENSPEMG00000009958) #13 Btf3 (ENSPEMG00000001070) ##15 ENSPEMG00000015367 ENSPEMG00000018029 #16 Utp15 (ENSPEMG00000012771) #17 Arhgef28 (ENSPEMG00000009703) #18 Enc1 (ENSPEMG00000001877) #19 Hexb (ENSPEMG00000005317) #20 Gfm2 (ENSPEMG00000000622) #21 Nsa2 (ENSPEMG00000015289) ##22 Fam169a (ENSPEMG00000010978) #24 Gcnt4 (ENSPEMG00000018132) Ankrd31 (ENSPEMG00000018561) #27 Hmgcr (ENSPEMG00000016961) #28 Cert1 (ENSPEMG00000010777) #29 ENSPEMG00000017070 Polk (ENSPEMG00000019237) #30 Ankdd1b (ENSPEMG00000005192) #31 Poc5 (ENSPEMG00000008614) #32 Sv2c (ENSPEMG00000013942) #35 F2rl2 (ENSPEMG00000019142) #36 Iqgap2 (ENSPEMG00000013395) #37 F2r (ENSPEMG00000025363) ##36 F2rl1 (ENSPEMG00000029040) ##36 S100z (ENSPEMG00000013966) Cricetinae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.f ##22 Chinese hamster chok1gshd MODERN SPECIES 111 Dab1 (ENSCGRG00001020473) ENSCGRG00001011317 ENSCGRG00001022662 Oma1 (ENSCGRG00001019711) 4921539E11Rik (ENSCGRG00001020618) Slc35d1 (ENSCGRG00001022056) Mier1 (ENSCGRG00001002839) Dnai4 (ENSCGRG00001013824) Insl5 (ENSCGRG00001018011) Dynlt5 (ENSCGRG00001018434) Sgip1 (ENSCGRG00001006459) Pde4b (ENSCGRG00001000502) Lepr (ENSCGRG00001013297) Leprot (ENSCGRG00001018267) Dnajc6 (ENSCGRG00001021227) ENSCGRG00001024354 ##22 ENSCGRG00001003307 Jak1 (ENSCGRG00001008727) Raver2 (ENSCGRG00001011852) Cachd1 (ENSCGRG00001024125) Ube2u (ENSCGRG00001024744) ENSCGRG00001023231 Ror1 (ENSCGRG00001015667) Pgm1 (ENSCGRG00001024185) Efcab7 (ENSCGRG00001013291) Itgb3bp (ENSCGRG00001023317) Alg6 (ENSCGRG00001024513) Foxd3 (ENSCGRG00001009393) ENSCGRG00001002098 Atg4c (ENSCGRG00001000630) ENSCGRG00001002780 Golden Hamster MODERN SPECIES 620 Mrps27 (ENSMAUG00000005620) Ptcd2 (ENSMAUG00000020253) Zfp366 (ENSMAUG00000010701) #7 Tnpo1 (ENSMAUG00000020550) #9 Fcho2 (ENSMAUG00000012033) #11 Tmem171 (ENSMAUG00000003047) #12 Tmem174 (ENSMAUG00000020261) #13 ENSMAUG00000004345 #15 ENSMAUG00000019518 Ankra2 (ENSMAUG00000011981) #16 Utp15 (ENSMAUG00000018838) #17 Arhgef28 (ENSMAUG00000021575) #18 Enc1 (ENSMAUG00000004740) #19 Hexb (ENSMAUG00000014888) #20 Gfm2 (ENSMAUG00000022103) #21 Nsa2 (ENSMAUG00000002302) ##22 Fam169a (ENSMAUG00000009954) #24 Gcnt4 (ENSMAUG00000017229) Ankrd31 (ENSMAUG00000020142) #27 Hmgcr (ENSMAUG00000012278) #28 Cert1 (ENSMAUG00000019472) #29 Polk (ENSMAUG00000016560) #30 Ankdd1b (ENSMAUG00000018964) #31 Poc5 (ENSMAUG00000003174) #32 Sv2c (ENSMAUG00000005414) #35 Iqgap2 (ENSMAUG00000022130) #37 F2rl2 (ENSMAUG00000015710) #36 F2r (ENSMAUG00000010556) ##36 F2rl1 (ENSMAUG00000012126) ##36 S100z (ENSMAUG00000001531) Crhbp (ENSMAUG00000010702) Lesser Egyptian jerboa MODERN SPECIES 45 Tnpo1 (ENSJJAG00000010244) #9 ENSJJAG00000003013 #11 ENSJJAG00000014751 #11 ENSJJAG00000006718 Tmem171 (ENSJJAG00000018818) #12 Tmem174 (ENSJJAG00000015429) #13 ENSJJAG00000014230 Btf3 (ENSJJAG00000023592) ##15 ENSJJAG00000007499 Ankra2 (ENSJJAG00000024052) #16 ENSJJAG00000013122 #17 Arhgef28 (ENSJJAG00000015178) #18 Enc1 (ENSJJAG00000023945) #19 Hexb (ENSJJAG00000023858) #20 Gfm2 (ENSJJAG00000024278) #21 Nsa2 (ENSJJAG00000017152) ##22 Fam169a (ENSJJAG00000011041) #24 ENSJJAG00000016281 Gcnt4 (ENSJJAG00000010750) ENSJJAG00000010566 #27 Hmgcr (ENSJJAG00000010723) #28 Cert1 (ENSJJAG00000023198) #29 Polk (ENSJJAG00000004931) #30 Ankdd1b (ENSJJAG00000013237) #31 Poc5 (ENSJJAG00000019666) #32 Sv2c (ENSJJAG00000012121) #35 F2rl2 (ENSJJAG00000020545) #36 Iqgap2 (ENSJJAG00000023927) #37 F2r (ENSJJAG00000021467) ##36 F2rl1 (ENSJJAG00000005361) ##36 ENSJJAG00000018088 Kangaroo rat MODERN SPECIES 402 Tnpo1 (ENSDORG00000006476) #9 Fcho2 (ENSDORG00000005111) #11 Tmem171 (ENSDORG00000006307) #12 Tmem174 (ENSDORG00000024569) #13 Btf3 (ENSDORG00000014031) ##15 ENSDORG00000026799 Ankra2 (ENSDORG00000010493) #16 Utp15 (ENSDORG00000004399) #17 Msl3l2 (ENSDORG00000029030) ENSDORG00000027725 Arhgef28 (ENSDORG00000010566) #18 Enc1 (ENSDORG00000016227) #19 ENSDORG00000016229 #20 Gfm2 (ENSDORG00000016231) #21 ENSDORG00000030249 Nsa2 (ENSDORG00000012640) ##22 Fam169a (ENSDORG00000012641) #24 Gcnt4 (ENSDORG00000015957) Ankrd31 (ENSDORG00000008528) #27 ENSDORG00000005455 #28 Cert1 (ENSDORG00000005457) #29 Polk (ENSDORG00000007761) #30 Ankdd1b (ENSDORG00000007845) #31 Poc5 (ENSDORG00000000829) #32 Sv2c (ENSDORG00000004739) #35 Iqgap2 (ENSDORG00000006829) #37 F2rl2 (ENSDORG00000006832) #36 F2r (ENSDORG00000023264) ##36 ENSDORG00000024082 F2rl1 (ENSDORG00000004660) ##36 S100z (ENSDORG00000026410) Rodentia_A ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 11 CCDC14 (ENSHGLG00000001004) ENSHGLG00000001029 ENSHGLG00000046407 ENSHGLG00000012259 ENSHGLG00000020711 KALRN (ENSHGLG00000018826) UMPS (ENSHGLG00000011551) ENSHGLG00000047740 ITGB5 (ENSHGLG00000011184) ENSHGLG00000037460 ENSHGLG00000016690 ZNF148 (ENSHGLG00000011875) ENSHGLG00000014404 ENSHGLG00000017413 ENSHGLG00000047149 ENSHGLG00000019031 ##22 ENSHGLG00000021278 CX3CR1 (ENSHGLG00000016099) XIRP1 (ENSHGLG00000021303) CSRNP1 (ENSHGLG00000011052) TTC21A (ENSHGLG00000007505) GORASP1 (ENSHGLG00000011654) WDR48 (ENSHGLG00000012849) ENSHGLG00000043603 ENSHGLG00000042198 SCN11A (ENSHGLG00000010002) SCN10A (ENSHGLG00000012062) SCN5A (ENSHGLG00000013636) EXOG (ENSHGLG00000050843) ENSHGLG00000014483 ENSHGLG00000018221 Naked mole-rat female MODERN SPECIES 15 ENSHGLG00000016035 CACNG3 (ENSHGLG00000012458) ENSHGLG00000018993 ENSHGLG00000039762 ENSHGLG00000008327 TNRC6A (ENSHGLG00000012474) SLC5A11 (ENSHGLG00000012250) ARHGAP17 (ENSHGLG00000009967) LCMT1 (ENSHGLG00000018379) ENSHGLG00000016130 ENSHGLG00000048943 AQP8 (ENSHGLG00000015845) ZKSCAN2 (ENSHGLG00000015971) ENSHGLG00000050225 HS3ST4 (ENSHGLG00000044229) ENSHGLG00000009416 ##22 ENSHGLG00000043464 KDM8 (ENSHGLG00000015770) NSMCE1 (ENSHGLG00000006540) ENSHGLG00000041088 ENSHGLG00000040451 GTF3C1 (ENSHGLG00000011628) KATNIP (ENSHGLG00000016183) GSG1L (ENSHGLG00000049570) ENSHGLG00000014594 #23 ENSHGLG00000009679 ENSHGLG00000036755 ENSHGLG00000035175 ENSHGLG00000012819 SPNS1 (ENSHGLG00000011375) NFATC2IP (ENSHGLG00000014293) Hystricomorpha_a ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Degu DUPLICATION Degu MODERN SPECIES 149 ENSODEG00000006399 GSAP (ENSODEG00000007231) PTPN12 (ENSODEG00000007326) RSBN1L (ENSODEG00000006196) ENSODEG00000019377 PHTF2 (ENSODEG00000007039) MAGI2 (ENSODEG00000007551) GNAI1 (ENSODEG00000008540) GNAT3 (ENSODEG00000007421) CD36 (ENSODEG00000007161) SEMA3C (ENSODEG00000006685) ENSODEG00000007412 HGF (ENSODEG00000008277) CACNA2D1 (ENSODEG00000009374) PCLO (ENSODEG00000007259) ENSODEG00000007059 ##22 SEMA3E (ENSODEG00000007213) ENSODEG00000008317 SEMA3A (ENSODEG00000008194) SEMA3D (ENSODEG00000009195) Degu MODERN SPECIES 218 ENSODEG00000001771 #9 ENSODEG00000001831 #11 ENSODEG00000001852 #12 TMEM174 (ENSODEG00000001863) #13 ENSODEG00000001880 ##15 ANKRA2 (ENSODEG00000001906) #16 UTP15 (ENSODEG00000001962) #17 ARHGEF28 (ENSODEG00000002086) #18 ENC1 (ENSODEG00000002194) #19 ENSODEG00000002220 HEXB (ENSODEG00000002081) #20 GFM2 (ENSODEG00000002193) #21 ENSODEG00000002883 ##22 FAM169A (ENSODEG00000002906) #24 ENSODEG00000002941 GCNT4 (ENSODEG00000018869) ANKRD31 (ENSODEG00000003017) #27 HMGCR (ENSODEG00000003319) #28 CERT1 (ENSODEG00000002483) #29 POLK (ENSODEG00000002687) #30 ANKDD1B (ENSODEG00000003019) #31 POC5 (ENSODEG00000003014) #32 SV2C (ENSODEG00000003155) #35 IQGAP2 (ENSODEG00000003459) #37 ENSODEG00000003730 F2RL1 (ENSODEG00000002463) ##36 S100Z (ENSODEG00000002505) CRHBP (ENSODEG00000002524) Degu DUPLICATION Degu MODERN SPECIES 131 ENSODEG00000020026 REV3L (ENSODEG00000014010) ENSODEG00000013019 ENSODEG00000013155 ENSODEG00000013600 ENSODEG00000013062 ENSODEG00000013254 ENSODEG00000015389 SLC16A10 (ENSODEG00000013681) ENSODEG00000012904 ENSODEG00000013529 GTF3C6 (ENSODEG00000013017) ENSODEG00000012898 CDK19 (ENSODEG00000012764) ENSODEG00000014327 ENSODEG00000012677 ##22 ENSODEG00000012903 METTL24 (ENSODEG00000013180) CDC40 (ENSODEG00000012990) WASF1 (ENSODEG00000012933) GPR6 (ENSODEG00000020143) ENSODEG00000020129 ZBTB24 (ENSODEG00000014058) MICAL1 (ENSODEG00000013443) ENSODEG00000013880 SESN1 (ENSODEG00000013348) ENSODEG00000014459 AFG1L (ENSODEG00000014385) ENSODEG00000013844 NR2E1 (ENSODEG00000014374) ENSODEG00000013551 Degu MODERN SPECIES 86 PIGP (ENSODEG00000011154) ENSODEG00000012435 ENSODEG00000012671 VPS26C (ENSODEG00000011654) ENSODEG00000019985 DYRK1A (ENSODEG00000011707) KCNJ6 (ENSODEG00000011396) ENSODEG00000011894 ##22 KCNJ15 (ENSODEG00000012281) ERG (ENSODEG00000011796) ETS2 (ENSODEG00000012054) PSMG1 (ENSODEG00000013481) ENSODEG00000012050 ENSODEG00000011845 GET1 (ENSODEG00000011999) LCA5L (ENSODEG00000012419) SH3BGR (ENSODEG00000013522) ENSODEG00000013679 ENSODEG00000012206 ENSODEG00000013785 RRP1B (ENSODEG00000013177) HSF2BP (ENSODEG00000011763) SIK1 (ENSODEG00000012072) Primates ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Simiiformes DUPLICATION Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.a ##22 Catarrhini ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.a ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.a ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000159692 ENSGT00390000014507.b ENSGT00390000008827 ENSGT00940000157898 ENSGT00950000182939.b.a.a ENSGT00910000147945 ENSGT00940000158759 ENSGT00390000012818.o.a.a.a.b ENSGT01010000222851 ENSGT00390000012818.o.a.b ENSGT00920000149095.a ENSGT00550000074817.e.b ENSGT00940000163411 ENSGT00390000014063 ENSGT00940000154527.a.a.a ENSGT00390000018706.m.b.b.l.a ##22 ENSGT00940000154248.a ENSGT00940000160163 ENSGT00950000182891.a.a.b.a.a.a.a.y.a ENSGT00910000148170 ENSGT00940000157007 ENSGT00950000182952.B ENSGT00940000161149 ENSGT00940000161815 ENSGT00910000147745 ENSGT00940000158040 ENSGT01030000234555.a.a.b.a.a ENSGT00950000182959.a.b.b.b ENSGT01050000244900.a.a.a.a.a ENSGT00390000009310.j.a.a ENSGT00940000163962 Macaca ANCESTRAL SPECIES ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000159692 ENSGT00390000014507.b ENSGT00390000008827 ENSGT00940000157898 ENSGT00950000182939.b.a.a ENSGT00910000147945 ENSGT00940000158759 ENSGT00390000012818.o.a.a.a.b ENSGT00920000149095.a ENSGT00550000074817.e.b ENSGT00940000163411 ENSGT00390000014063 ENSGT00940000154527.a.a.a ENSGT00390000018706.m.b.b.l.a ##22 ENSGT00940000154248.a ENSGT00940000160163 ENSGT00950000182891.a.a.b.a.a.a.a.y.a ENSGT00910000148170 ENSGT00940000157007 ENSGT00950000182952.B ENSGT00940000161149 ENSGT00940000161815 ENSGT00910000147745 ENSGT00940000158040 ENSGT01030000234555.a.a.b.a.a ENSGT00950000182959.a.b.b.b ENSGT01050000244900.a.a.a.a.a ENSGT00390000009310.j.a.a ENSGT00940000163962 Pig-tailed macaque MODERN SPECIES 113 MDM4 (ENSMNEG00000026547) PIK3C2B (ENSMNEG00000044388) PPP1R15B (ENSMNEG00000040450) PLEKHA6 (ENSMNEG00000029610) GOLT1A (ENSMNEG00000033962) KISS1 (ENSMNEG00000039554) REN (ENSMNEG00000035397) ETNK2 (ENSMNEG00000030511) ENSMNEG00000000205 SOX13 (ENSMNEG00000027894) SNRPE (ENSMNEG00000034559) ENSMNEG00000031205 ENSMNEG00000035060 ZBED6 (ENSMNEG00000019676) LAX1 (ENSMNEG00000035734) ENSMNEG00000038506 ##22 ATP2B4 (ENSMNEG00000028334) OPTC (ENSMNEG00000007381) PRELP (ENSMNEG00000036078) ENSMNEG00000009223 ENSMNEG00000010740 FMOD (ENSMNEG00000037353) BTG2 (ENSMNEG00000030702) CHIT1 (ENSMNEG00000028068) CHI3L1 (ENSMNEG00000041632) ENSMNEG00000018834 MYBPH (ENSMNEG00000041712) ADORA1 (ENSMNEG00000036904) MYOG (ENSMNEG00000035895) PPFIA4 (ENSMNEG00000037213) ENSMNEG00000033971 Macaca_a ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.a ##22 Crab-eating macaque MODERN SPECIES CNTN2 (ENSMFAG00000038396) NFASC (ENSMFAG00000033112) ENSMFAG00000007354 LRRN2 (ENSMFAG00000010454) MDM4 (ENSMFAG00000033606) PIK3C2B (ENSMFAG00000003126) PPP1R15B (ENSMFAG00000039142) PLEKHA6 (ENSMFAG00000042643) KISS1 (ENSMFAG00000046289) REN (ENSMFAG00000000992) ETNK2 (ENSMFAG00000000571) SOX13 (ENSMFAG00000032765) ENSMFAG00000039994 ENSMFAG00000003997 LAX1 (ENSMFAG00000046296) ENSMFAG00000054151 ##22 ATP2B4 (ENSMFAG00000010073) OPTC (ENSMFAG00000045413) PRELP (ENSMFAG00000040633) ENSMFAG00000061915 ENSMFAG00000049609 FMOD (ENSMFAG00000033719) BTG2 (ENSMFAG00000025652) CHIT1 (ENSMFAG00000045615) CHI3L1 (ENSMFAG00000003587) MYBPH (ENSMFAG00000038338) ADORA1 (ENSMFAG00000035176) MYOG (ENSMFAG00000043657) PPFIA4 (ENSMFAG00000000167) TMEM183A (ENSMFAG00000034100) ENSMFAG00000058328 Cercopithecinae_b ANCESTRAL SPECIES 3 ENSGT00530000063539.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000159692 ENSGT00390000014507.b ENSGT00390000008827 ENSGT00940000157898 ENSGT00950000182939.b.a.a ENSGT00940000158759 ENSGT00390000012818.o.a.a.a.b ENSGT01010000222851 ENSGT00390000012818.o.a.b ENSGT00920000149095.a ENSGT00390000014063 ENSGT00940000154527.a.a.a ENSGT00390000018706.m.b.b.l.a ##22 ENSGT00940000154248.a ENSGT00940000160163 ENSGT00950000182891.a.a.b.a.a.a.a.y.a ENSGT00910000148170 ENSGT00940000157007 ENSGT00950000182952.B ENSGT00940000161149 ENSGT00940000161815 ENSGT00910000147745 ENSGT00940000158040 ENSGT01030000234555.a.a.b.a.a ENSGT00950000182959.a.b.b.b ENSGT01050000244900.a.a.a.a.a ENSGT00390000009310.j.a.a ENSGT00940000163241 Cercopithecinae_d ANCESTRAL SPECIES 46 ENSGT00940000161204 ENSGT00530000063539.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000159692 ENSGT00390000014507.b ENSGT00390000008827 ENSGT00940000157898 ENSGT00950000182939.b.a.a ENSGT00940000158759 ENSGT00390000012818.o.a.a.a.b ENSGT01010000222851 ENSGT00920000149095.a ENSGT00390000014063 ENSGT00940000154527.a.a.a ENSGT00390000018706.m.b.b.l.a ##22 ENSGT00940000154248.a ENSGT00940000160163 ENSGT00950000182891.a.a.b.a.a.a.a.y.a ENSGT00910000148170 ENSGT00940000157007 ENSGT00950000182952.B ENSGT00940000161149 ENSGT00940000161815 ENSGT00910000147745 ENSGT00940000158040 ENSGT01030000234555.a.a.b.a.a ENSGT00950000182959.a.b.b.b ENSGT01050000244900.a.a.a.a.a ENSGT00390000009310.j.a.a ENSGT00940000163241 Drill MODERN SPECIES 1046 LRRN2 (ENSMLEG00000004181) MDM4 (ENSMLEG00000032041) PIK3C2B (ENSMLEG00000042470) PPP1R15B (ENSMLEG00000030714) PLEKHA6 (ENSMLEG00000037344) GOLT1A (ENSMLEG00000031643) KISS1 (ENSMLEG00000027711) REN (ENSMLEG00000028063) ETNK2 (ENSMLEG00000030782) SOX13 (ENSMLEG00000013020) SNRPE (ENSMLEG00000043360) ENSMLEG00000009417 ENSMLEG00000036916 LAX1 (ENSMLEG00000024411) ATP2B4 (ENSMLEG00000035583) ENSMLEG00000032056 ##22 OPTC (ENSMLEG00000039265) PRELP (ENSMLEG00000042419) ENSMLEG00000027359 FMOD (ENSMLEG00000036882) BTG2 (ENSMLEG00000043803) CHIT1 (ENSMLEG00000031883) CHI3L1 (ENSMLEG00000028044) ENSMLEG00000024942 MYBPH (ENSMLEG00000042456) ADORA1 (ENSMLEG00000042216) MYOG (ENSMLEG00000035402) PPFIA4 (ENSMLEG00000042044) ENSMLEG00000043756 ENSMLEG00000009433 CYB5R1 (ENSMLEG00000036777) Sooty mangabey MODERN SPECIES 106 LRRN2 (ENSCATG00000013327) MDM4 (ENSCATG00000027086) PIK3C2B (ENSCATG00000035680) PPP1R15B (ENSCATG00000032011) ENSCATG00000038235 PLEKHA6 (ENSCATG00000032404) GOLT1A (ENSCATG00000035546) KISS1 (ENSCATG00000036938) REN (ENSCATG00000030280) ETNK2 (ENSCATG00000033834) SOX13 (ENSCATG00000044597) ENSCATG00000041403 ENSCATG00000039923 LAX1 (ENSCATG00000035082) ATP2B4 (ENSCATG00000044125) ENSCATG00000041383 ##22 OPTC (ENSCATG00000041166) PRELP (ENSCATG00000042683) ENSCATG00000014892 ENSCATG00000015096 FMOD (ENSCATG00000023109) BTG2 (ENSCATG00000045262) CHIT1 (ENSCATG00000045197) CHI3L1 (ENSCATG00000035771) MYBPH (ENSCATG00000033851) ADORA1 (ENSCATG00000045370) MYOG (ENSCATG00000002399) PPFIA4 (ENSCATG00000044625) ENSCATG00000026146 ENSCATG00000045023 ENSCATG00000015187 Hominoidea ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.a ##22 Hominidae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.a ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.a ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.a ##22 Pan ANCESTRAL SPECIES 20 ENSGT00910000147045 ENSGT00940000163765.e.b ENSGT00940000163765.e.a ENSGT00950000183083.a.d.a ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00910000148040 ENSGT00680000100037.g.a.b.a.a ENSGT00940000167633 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00390000018706.m.b.b.l.a ##22 ENSGT00940000163242.e ENSGT00940000157461 ENSGT00940000155405.jb ENSGT00940000157691 ENSGT00940000156573 ENSGT00390000016607.a.e ENSGT00390000016607.a.f ENSGT00940000160579 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000154355.e.b ENSGT00940000158898 ENSGT00950000183065.A ENSGT00390000017491.s.a.b.a ENSGT00940000154489.A Bonobo MODERN SPECIES 6 ENSPPAG00000032491 TLN2 (ENSPPAG00000035497) ENSPPAG00000041336 ENSPPAG00000002371 VPS13C (ENSPPAG00000029152) RORA (ENSPPAG00000038168) ICE2 (ENSPPAG00000004647) ANXA2 (ENSPPAG00000043943) FOXB1 (ENSPPAG00000014279) ENSPPAG00000004248 ENSPPAG00000036328 ENSPPAG00000040483 GTF2A2 (ENSPPAG00000037230) GCNT3 (ENSPPAG00000006538) FAM81A (ENSPPAG00000034650) ENSPPAG00000042872 ##22 LDHAL6B (ENSPPAG00000017634) MYO1E (ENSPPAG00000042211) CCNB2 (ENSPPAG00000037736) RNF111 (ENSPPAG00000023370) SLTM (ENSPPAG00000029308) MINDY2 (ENSPPAG00000040407) ENSPPAG00000006779 ADAM10 (ENSPPAG00000040346) LIPC (ENSPPAG00000000168) AQP9 (ENSPPAG00000043955) ENSPPAG00000027982 ALDH1A2 (ENSPPAG00000033733) ENSPPAG00000006446 ENSPPAG00000044087 CGNL1 (ENSPPAG00000031337) Chimpanzee MODERN SPECIES 6 C2CD4B (ENSPTRG00000049027) C2CD4A (ENSPTRG00000030264) VPS13C (ENSPTRG00000007135) RORA (ENSPTRG00000052707) ICE2 (ENSPTRG00000007133) ENSPTRG00000042801 ANXA2 (ENSPTRG00000007132) FOXB1 (ENSPTRG00000007131) ENSPTRG00000048257 ENSPTRG00000047092 ENSPTRG00000049013 BNIP2 (ENSPTRG00000007130) GTF2A2 (ENSPTRG00000007129) GCNT3 (ENSPTRG00000007128) FAM81A (ENSPTRG00000007127) ENSPTRG00000045531 ##22 LDHAL6B (ENSPTRG00000007125) MYO1E (ENSPTRG00000007124) CCNB2 (ENSPTRG00000007123) RNF111 (ENSPTRG00000007122) SLTM (ENSPTRG00000007121) MINDY2 (ENSPTRG00000044903) ENSPTRG00000040458 ADAM10 (ENSPTRG00000007116) LIPC (ENSPTRG00000007115) AQP9 (ENSPTRG00000007114) ENSPTRG00000045953 ALDH1A2 (ENSPTRG00000007113) ENSPTRG00000007112 ENSPTRG00000003397 CGNL1 (ENSPTRG00000007110) Gorilla MODERN SPECIES 6 C2CD4B (ENSGGOG00000025149) ENSGGOG00000024083 VPS13C (ENSGGOG00000016853) RORA (ENSGGOG00000000541) ENSGGOG00000040058 ENSGGOG00000040146 ICE2 (ENSGGOG00000022206) ENSGGOG00000009738 FOXB1 (ENSGGOG00000024062) ENSGGOG00000040675 ENSGGOG00000042348 ENSGGOG00000005147 GTF2A2 (ENSGGOG00000024127) GCNT3 (ENSGGOG00000015222) FAM81A (ENSGGOG00000015899) ENSGGOG00000027194 ##22 ENSGGOG00000042225 ENSGGOG00000036165 LDHAL6B (ENSGGOG00000022172) MYO1E (ENSGGOG00000007653) CCNB2 (ENSGGOG00000007644) RNF111 (ENSGGOG00000017000) SLTM (ENSGGOG00000015866) MINDY2 (ENSGGOG00000000256) ADAM10 (ENSGGOG00000010649) LIPC (ENSGGOG00000008125) AQP9 (ENSGGOG00000012151) ENSGGOG00000040043 ALDH1A2 (ENSGGOG00000007661) GCOM1 (ENSGGOG00000012125) CGNL1 (ENSGGOG00000026524) Platyrrhini ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.a ##22 Cebidae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.a ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.a ##22 Capuchin MODERN SPECIES 309 ENSCCAG00000004246 ENSCCAG00000021370 ##22 PTGS1 (ENSCCAG00000020302) ENSCCAG00000024498 ENSCCAG00000035511 ENSCCAG00000025786 RBM18 (ENSCCAG00000035467) LHX6 (ENSCCAG00000037762) MORN5 (ENSCCAG00000031106) NDUFA8 (ENSCCAG00000013135) TTLL11 (ENSCCAG00000022642) DAB2IP (ENSCCAG00000025808) ENSCCAG00000027514 STOM (ENSCCAG00000029170) GSN (ENSCCAG00000028764) RAB14 (ENSCCAG00000020267) CNTRL (ENSCCAG00000024994) Mas night monkey MODERN SPECIES 1082 ENSANAG00000005998 ENSANAG00000018706 RPA4 (ENSANAG00000029328) ENSANAG00000010664 DIAPH2 (ENSANAG00000027935) ENSANAG00000022144 ENSANAG00000031933 PCDH19 (ENSANAG00000036635) TNMD (ENSANAG00000021840) TSPAN6 (ENSANAG00000030641) SRPX2 (ENSANAG00000029401) SYTL4 (ENSANAG00000029096) ENSANAG00000026590 CSTF2 (ENSANAG00000022342) ENSANAG00000019383 ##22 XKRX (ENSANAG00000029464) NOX1 (ENSANAG00000028753) ARL13A (ENSANAG00000029887) TRMT2B (ENSANAG00000020552) TMEM35A (ENSANAG00000027535) ENSANAG00000019842 ENSANAG00000031468 CENPI (ENSANAG00000016647) ENSANAG00000023607 ARMCX5 (ENSANAG00000019843) Simiiformes ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.b ##22 Catarrhini ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.b ##22 Cercopithecidae ANCESTRAL SPECIES 19 ENSGT00940000154977.l.b ENSGT00940000153284.a.h.i.b ENSGT00940000162668 ENSGT00940000158335 ENSGT00940000162927 ENSGT00730000111097.e ENSGT00940000157822 ENSGT00940000153239.B.i.a.b ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000018706.m.b.b.l.b ##22 ENSGT00390000003231.a.f ENSGT00940000161284 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00940000161565 ENSGT00940000154661.b ENSGT00940000158469 ENSGT00390000018085.a.a.a.b.b ENSGT00390000008751.b ENSGT00940000153503.a.b ENSGT00940000162587 ENSGT00940000162561 ENSGT00940000163042 Cercopithecinae ANCESTRAL SPECIES 13 ENSGT00940000154977.l.b ENSGT00940000153284.a.h.i.b ENSGT00940000162668 ENSGT00940000158335 ENSGT00940000162927 ENSGT00730000111097.e ENSGT00940000157822 ENSGT00940000153239.B.i.a.b ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000018706.m.b.b.l.b ##22 ENSGT00390000003231.a.f ENSGT00940000161284 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00940000161565 ENSGT00940000154661.b ENSGT00940000158469 ENSGT00390000018085.a.a.a.b.b ENSGT00390000008751.b ENSGT00940000153503.a.b ENSGT00940000162587 ENSGT00940000162561 ENSGT00940000163042 Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00940000163848 ENSGT00940000154977.l.b ENSGT00940000153284.a.h.i.b ENSGT00940000162668 ENSGT00940000158335 ENSGT00940000155683.l.a ENSGT00940000157822 ENSGT00940000153239.B.i.a.b ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000018706.m.b.b.l.b ##22 ENSGT00390000003231.a.f ENSGT00940000161284 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00940000161565 ENSGT00940000154661.b ENSGT00940000158469 ENSGT00390000018085.a.a.a.b.b ENSGT00390000008751.b ENSGT00940000153503.a.b ENSGT00940000162587 ENSGT00940000162561 ENSGT00940000163042 Cercopithecinae_b ANCESTRAL SPECIES 34 ENSGT00940000154301.`b.b ENSGT00940000162927 ENSGT00730000111097.e ENSGT00910000146851.a ENSGT00530000063516.a.a.c.b.y.a.c ENSGT00940000157822 ENSGT01050000248440 ENSGT00910000147624 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000018706.m.b.b.l.b ##22 ENSGT00390000003231.a.f ENSGT00940000161284 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00390000015537.`b.b ENSGT00940000153467.a.b ENSGT00940000161565 ENSGT00940000154661.b ENSGT00940000158469 ENSGT00390000018085.a.a.a.b.b ENSGT00390000008751.b ENSGT00940000153503.a.b ENSGT00940000162587 ENSGT00940000162561 Cercopithecinae_d ANCESTRAL SPECIES 147 ENSGT00940000157822 ENSGT00950000183105.A.m.a.q.a.b ENSGT00910000147624 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000154655.a.c.a ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000018706.m.b.b.l.b ##22 ENSGT00390000003231.a.f ENSGT00940000161284 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00390000015537.`b.b ENSGT00940000153467.a.b ENSGT00940000161565 ENSGT00940000154661.b ENSGT00940000158469 ENSGT00390000018085.b ENSGT00390000008751.b ENSGT00940000162587 ENSGT00940000162561 ENSGT00940000163042 Drill MODERN SPECIES 1438 TNMD (ENSMLEG00000043007) TSPAN6 (ENSMLEG00000028878) SRPX2 (ENSMLEG00000039631) SYTL4 (ENSMLEG00000039405) ENSMLEG00000002642 ENSMLEG00000034411 CSTF2 (ENSMLEG00000036870) NOX1 (ENSMLEG00000037294) ENSMLEG00000033439 ##22 XKRX (ENSMLEG00000033129) ARL13A (ENSMLEG00000044347) TRMT2B (ENSMLEG00000041170) TMEM35A (ENSMLEG00000041720) CENPI (ENSMLEG00000034737) ENSMLEG00000036465 ENSMLEG00000016312 DRP2 (ENSMLEG00000035379) TAF7L (ENSMLEG00000036706) ENSMLEG00000034977 BTK (ENSMLEG00000041562) ENSMLEG00000041433 GLA (ENSMLEG00000038421) ARMCX4 (ENSMLEG00000037823) ARMCX1 (ENSMLEG00000019309) Sooty mangabey MODERN SPECIES 181 ENSCATG00000022320 DIAPH2 (ENSCATG00000012750) ENSCATG00000020948 ENSCATG00000021228 PCDH19 (ENSCATG00000029825) TNMD (ENSCATG00000030175) TSPAN6 (ENSCATG00000035573) SRPX2 (ENSCATG00000000283) SYTL4 (ENSCATG00000037801) ENSCATG00000022377 ENSCATG00000042265 ENSCATG00000033662 CSTF2 (ENSCATG00000022835) NOX1 (ENSCATG00000031320) ENSCATG00000038584 ##22 XKRX (ENSCATG00000035962) ARL13A (ENSCATG00000002456) TRMT2B (ENSCATG00000001665) TMEM35A (ENSCATG00000039413) CENPI (ENSCATG00000017865) ENSCATG00000030561 ENSCATG00000035715 DRP2 (ENSCATG00000022212) TAF7L (ENSCATG00000037171) TIMM8A (ENSCATG00000020206) BTK (ENSCATG00000033966) ENSCATG00000010793 GLA (ENSCATG00000037297) ARMCX4 (ENSCATG00000043156) ARMCX1 (ENSCATG00000022441) Macaca ANCESTRAL SPECIES 13 ENSGT00940000162668 ENSGT00940000158335 ENSGT00940000162927 ENSGT00730000111097.e ENSGT00910000146851.a ENSGT00530000063516.a.a.c.b.y.a.c ENSGT00940000157822 ENSGT00940000153239.B.i.a.b ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000018706.m.b.b.l.b ##22 ENSGT00390000003231.a.f ENSGT00940000161284 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00940000161565 ENSGT00940000154661.b ENSGT00940000158469 ENSGT00390000018085.a.a.a.b.b ENSGT00390000008751.b ENSGT00940000153503.a.b ENSGT00940000162587 ENSGT00940000162561 ENSGT00940000163042 Pig-tailed macaque MODERN SPECIES 282 ENSMNEG00000037685 PCDH19 (ENSMNEG00000037156) TNMD (ENSMNEG00000030016) TSPAN6 (ENSMNEG00000044238) SRPX2 (ENSMNEG00000008534) SYTL4 (ENSMNEG00000038314) CSTF2 (ENSMNEG00000041824) NOX1 (ENSMNEG00000002185) ENSMNEG00000038356 ##22 XKRX (ENSMNEG00000041665) ARL13A (ENSMNEG00000026016) TRMT2B (ENSMNEG00000045257) TMEM35A (ENSMNEG00000034536) CENPI (ENSMNEG00000005531) ENSMNEG00000034104 ENSMNEG00000035989 DRP2 (ENSMNEG00000039243) TAF7L (ENSMNEG00000028576) TIMM8A (ENSMNEG00000036806) BTK (ENSMNEG00000037093) RPL36A (ENSMNEG00000041457) GLA (ENSMNEG00000039278) ARMCX4 (ENSMNEG00000028996) ARMCX1 (ENSMNEG00000038239) Rhinopithecus ANCESTRAL SPECIES 566 ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000018706.m.b.b.l.b ##22 ENSGT00390000003231.a.f ENSGT00940000161284 Black snub-nosed monkey MODERN SPECIES 2136 CSTF2 (ENSRBIG00000030745) NOX1 (ENSRBIG00000039548) ENSRBIG00000010262 ##22 XKRX (ENSRBIG00000008346) ARL13A (ENSRBIG00000033184) Golden snub-nosed monkey MODERN SPECIES 2205 TSPAN6 (ENSRROG00000031949) SRPX2 (ENSRROG00000038719) SYTL4 (ENSRROG00000045214) CSTF2 (ENSRROG00000045042) NOX1 (ENSRROG00000036548) ENSRROG00000030179 ##22 XKRX (ENSRROG00000008500) ARL13A (ENSRROG00000028927) Hominoidea ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.b ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00940000162668 ENSGT00940000158335.c ENSGT00940000162927 ENSGT00730000111097.e ENSGT00940000163054 ENSGT00940000157822 ENSGT00940000153239.B.i.a.b ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000158987 ENSGT00940000161632.c ENSGT00950000183123.h.b ENSGT00390000018706.m.b.b.l.b ##22 ENSGT00390000003231.a.f.b ENSGT00940000161284 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235.c ENSGT00940000153467.a.b ENSGT00940000161565 ENSGT00940000154661.b ENSGT00940000158469 ENSGT00390000018085.a.a.a.b.b ENSGT00390000008751.b ENSGT00940000153503.a.b ENSGT00940000162587 ENSGT00940000162561 ENSGT00940000163042 Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00940000162668 ENSGT00940000158335.c ENSGT00940000162927 ENSGT00730000111097.e ENSGT00940000163054 ENSGT00940000157822 ENSGT00940000153239.B.i.a.b ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000158987 ENSGT00940000161632.c ENSGT00950000183123.h.b ENSGT00390000018706.m.b.b.l.b ##22 ENSGT00390000003231.a.f.b ENSGT00940000161284 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235.c ENSGT00940000153467.a.b ENSGT00940000161565 ENSGT00940000154661.b ENSGT00940000158469 ENSGT00390000018085.a.a.a.b.b ENSGT00390000018085.a.a.a.b.a ENSGT00390000008751.b ENSGT00940000153503.a.b ENSGT00940000162587 ENSGT00940000162561 Pan ANCESTRAL SPECIES 6 ENSGT00940000153889.e.a.a ENSGT00940000155206.d.b ENSGT00940000162927 ENSGT00730000111097.e ENSGT00940000163054 ENSGT00940000157822 ENSGT00940000153239.B.i.a.b ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000158987 ENSGT00940000161632.c ENSGT00950000183123.h.b ENSGT00390000018706.m.b.b.l.b ##22 ENSGT00390000003231.a.f.b ENSGT00940000161284 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235.c ENSGT00940000153467.a.b ENSGT00940000161565 ENSGT00940000154661.b ENSGT00940000158469 ENSGT00390000018085.a.a.a.b.a ENSGT00390000008751.b ENSGT00940000153503.a.b ENSGT00940000162587 ENSGT00940000162561 ENSGT00940000163042 Bonobo MODERN SPECIES 369 ENSPPAG00000003031 ENSPPAG00000007354 NAP1L3 (ENSPPAG00000019923) FAM133A (ENSPPAG00000017635) ENSPPAG00000038822 DIAPH2 (ENSPPAG00000040909) ENSPPAG00000034644 PCDH19 (ENSPPAG00000039228) TNMD (ENSPPAG00000035804) TSPAN6 (ENSPPAG00000038316) SRPX2 (ENSPPAG00000039226) SYTL4 (ENSPPAG00000026955) CSTF2 (ENSPPAG00000031804) NOX1 (ENSPPAG00000021977) ENSPPAG00000027791 ENSPPAG00000031058 ##22 XKRX (ENSPPAG00000030677) ARL13A (ENSPPAG00000028709) TRMT2B (ENSPPAG00000038826) TMEM35A (ENSPPAG00000042769) CENPI (ENSPPAG00000035823) ENSPPAG00000001178 DRP2 (ENSPPAG00000007600) ENSPPAG00000029819 TIMM8A (ENSPPAG00000025293) BTK (ENSPPAG00000038664) ENSPPAG00000036561 GLA (ENSPPAG00000028937) ENSPPAG00000028452 ARMCX4 (ENSPPAG00000030144) ENSPPAG00000037360 Chimpanzee MODERN SPECIES 972 ENSPTRG00000043794 NAP1L3 (ENSPTRG00000022080) FAM133A (ENSPTRG00000044529) ENSPTRG00000033789 ENSPTRG00000048048 DIAPH2 (ENSPTRG00000022082) ENSPTRG00000043192 PCDH19 (ENSPTRG00000022085) TNMD (ENSPTRG00000022086) TSPAN6 (ENSPTRG00000022087) SRPX2 (ENSPTRG00000022088) SYTL4 (ENSPTRG00000022089) CSTF2 (ENSPTRG00000022090) NOX1 (ENSPTRG00000048908) ENSPTRG00000052173 ENSPTRG00000050488 ##22 XKRX (ENSPTRG00000022093) ARL13A (ENSPTRG00000022094) TRMT2B (ENSPTRG00000023413) TMEM35A (ENSPTRG00000022097) CENPI (ENSPTRG00000022098) ENSPTRG00000044069 DRP2 (ENSPTRG00000022100) TAF7L (ENSPTRG00000022102) TIMM8A (ENSPTRG00000022103) BTK (ENSPTRG00000022104) HNRNPH2 (ENSPTRG00000022107) GLA (ENSPTRG00000022106) ENSPTRG00000049184 ENSPTRG00000052745 ARMCX1 (ENSPTRG00000028239) Gorilla MODERN SPECIES 523 ENSGGOG00000025902 NAP1L3 (ENSGGOG00000016989) FAM133A (ENSGGOG00000043974) ENSGGOG00000038270 DIAPH2 (ENSGGOG00000002859) ENSGGOG00000038151 ENSGGOG00000027167 PCDH19 (ENSGGOG00000001810) TNMD (ENSGGOG00000017007) TSPAN6 (ENSGGOG00000010003) SRPX2 (ENSGGOG00000010009) SYTL4 (ENSGGOG00000001159) CSTF2 (ENSGGOG00000022267) NOX1 (ENSGGOG00000006886) ENSGGOG00000027879 ENSGGOG00000022588 ##22 XKRX (ENSGGOG00000001349) ARL13A (ENSGGOG00000009336) TRMT2B (ENSGGOG00000023759) TMEM35A (ENSGGOG00000027304) CENPI (ENSGGOG00000012614) ENSGGOG00000043409 DRP2 (ENSGGOG00000004271) TAF7L (ENSGGOG00000004463) TIMM8A (ENSGGOG00000024934) BTK (ENSGGOG00000022176) RPL36A (ENSGGOG00000009460) GLA (ENSGGOG00000008092) ARMCX4 (ENSGGOG00000026328) ARMCX6 (ENSGGOG00000009036) NXF5 (ENSGGOG00000004059) Platyrrhini ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.b ##22 Cebidae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.b ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.l.b ##22 Bolivian squirrel monkey MODERN SPECIES 42 B3GLCT (ENSSBOG00000027304) HSPH1 (ENSSBOG00000021221) ENSSBOG00000023117 TEX26 (ENSSBOG00000029547) MEDAG (ENSSBOG00000014983) ALOX5AP (ENSSBOG00000035529) USPL1 (ENSSBOG00000028053) ENSSBOG00000024496 ENSSBOG00000023208 KATNAL1 (ENSSBOG00000009792) ENSSBOG00000020013 UBL3 (ENSSBOG00000009211) ENSSBOG00000028866 SLC7A1 (ENSSBOG00000020061) MTUS2 (ENSSBOG00000026505) ENSSBOG00000019071 ##22 SLC46A3 (ENSSBOG00000025396) POMP (ENSSBOG00000032229) FLT1 (ENSSBOG00000015766) ENSSBOG00000020899 PAN3 (ENSSBOG00000020298) ENSSBOG00000032374 FLT3 (ENSSBOG00000026666) ENSSBOG00000020835 ENSSBOG00000027743 CDX2 (ENSSBOG00000031573) PDX1 (ENSSBOG00000031436) GSX1 (ENSSBOG00000026103) ENSSBOG00000015416 ENSSBOG00000028482 ENSSBOG00000014497 Simiiformes ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.m ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.m ##22 Mas night monkey MODERN SPECIES 790 GPATCH11 (ENSANAG00000015896) HEATR5B (ENSANAG00000024059) STRN (ENSANAG00000029546) VIT (ENSANAG00000031684) FEZ2 (ENSANAG00000019636) CRIM1 (ENSANAG00000024916) ENSANAG00000024227 ENSANAG00000014958 FAM98A (ENSANAG00000037168) RASGRP3 (ENSANAG00000024551) LTBP1 (ENSANAG00000032383) TTC27 (ENSANAG00000022831) ENSANAG00000028575 BIRC6 (ENSANAG00000025679) YIPF4 (ENSANAG00000027229) ENSANAG00000019953 ##22 SLC30A6 (ENSANAG00000030881) SPAST (ENSANAG00000036158) ENSANAG00000032382 DPY30 (ENSANAG00000033628) MEMO1 (ENSANAG00000021250) ENSANAG00000025823 ENSANAG00000033740 SRD5A2 (ENSANAG00000024836) XDH (ENSANAG00000033099) EHD3 (ENSANAG00000020422) CAPN14 (ENSANAG00000031505) GALNT14 (ENSANAG00000013279) CAPN13 (ENSANAG00000028856) LCLAT1 (ENSANAG00000031030) LBH (ENSANAG00000031643) Cebidae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.m ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.m ##22 Capuchin MODERN SPECIES 281 IQSEC1 (ENSCCAG00000024388) RPL32 (ENSCCAG00000025373) CAND2 (ENSCCAG00000032849) TMEM40 (ENSCCAG00000020743) RAF1 (ENSCCAG00000023070) MKRN2 (ENSCCAG00000019802) ENSCCAG00000022711 ##22 MKRN2OS (ENSCCAG00000031553) TSEN2 (ENSCCAG00000037851) PPARG (ENSCCAG00000027364) SYN2 (ENSCCAG00000034848) TIMP4 (ENSCCAG00000035892) TAMM41 (ENSCCAG00000025773) VGLL4 (ENSCCAG00000032615) ATG7 (ENSCCAG00000035255) SLC6A1 (ENSCCAG00000026677) SLC6A11 (ENSCCAG00000030058) ATP2B2 (ENSCCAG00000032907) SEC13 (ENSCCAG00000026715) GHRL (ENSCCAG00000022227) TATDN2 (ENSCCAG00000024974) IRAK2 (ENSCCAG00000025730) Catarrhini ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.m ##22 Hominoidea ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.m ##22 Hominidae ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.m ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.m ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.m ##22 Pan ANCESTRAL SPECIES ENSGT00390000018706.m.b.b.m ##22 Chimpanzee MODERN SPECIES 3 AMDHD1 (ENSPTRG00000005319) CCDC38 (ENSPTRG00000005318) SNRPF (ENSPTRG00000005317) ENSPTRG00000049896 NTN4 (ENSPTRG00000005315) USP44 (ENSPTRG00000005314) METAP2 (ENSPTRG00000005313) ENSPTRG00000044514 ENSPTRG00000045308 VEZT (ENSPTRG00000005312) ENSPTRG00000043616 FGD6 (ENSPTRG00000005309) NR2C1 (ENSPTRG00000005307) NDUFA12 (ENSPTRG00000005306) TMCC3 (ENSPTRG00000005304) ENSPTRG00000049511 ##22 CEP83 (ENSPTRG00000005302) PLXNC1 (ENSPTRG00000005301) ENSPTRG00000047060 CRADD (ENSPTRG00000005300) SOCS2 (ENSPTRG00000005299) MRPL42 (ENSPTRG00000022791) UBE2N (ENSPTRG00000005297) NUDT4 (ENSPTRG00000005296) ENSPTRG00000048686 EEA1 (ENSPTRG00000005295) PLEKHG7 (ENSPTRG00000005292) C12H12orf74 (ENSPTRG00000033711) ENSPTRG00000029605 BTG1 (ENSPTRG00000050131) DCN (ENSPTRG00000005290) Bonobo MODERN SPECIES 3 CCDC38 (ENSPPAG00000028731) ENSPPAG00000003072 NTN4 (ENSPPAG00000029128) USP44 (ENSPPAG00000031623) METAP2 (ENSPPAG00000040044) ENSPPAG00000016591 ENSPPAG00000011544 ENSPPAG00000041961 VEZT (ENSPPAG00000032437) ENSPPAG00000019205 FGD6 (ENSPPAG00000041692) NR2C1 (ENSPPAG00000043732) NDUFA12 (ENSPPAG00000014970) TMCC3 (ENSPPAG00000043931) ENSPPAG00000038252 ENSPPAG00000028908 ##22 ENSPPAG00000033767 CEP83 (ENSPPAG00000038283) PLXNC1 (ENSPPAG00000041664) ENSPPAG00000033933 ENSPPAG00000031890 ENSPPAG00000030048 SOCS2 (ENSPPAG00000040884) MRPL42 (ENSPPAG00000038254) ENSPPAG00000028330 ENSPPAG00000035362 ENSPPAG00000043536 EEA1 (ENSPPAG00000041822) ENSPPAG00000044085 ENSPPAG00000043982 BTG1 (ENSPPAG00000043618) Gorilla MODERN SPECIES 3 AMDHD1 (ENSGGOG00000006854) CCDC38 (ENSGGOG00000008870) ENSGGOG00000001127 ENSGGOG00000003096 NTN4 (ENSGGOG00000013684) USP44 (ENSGGOG00000008702) METAP2 (ENSGGOG00000008696) ENSGGOG00000028193 ENSGGOG00000037312 VEZT (ENSGGOG00000001896) FGD6 (ENSGGOG00000012410) NR2C1 (ENSGGOG00000012884) NDUFA12 (ENSGGOG00000012880) TMCC3 (ENSGGOG00000007536) SUCLG2 (ENSGGOG00000038911) ENSGGOG00000028504 ##22 ENSGGOG00000036546 ENSGGOG00000028247 CEP83 (ENSGGOG00000026256) PLXNC1 (ENSGGOG00000002553) CRADD (ENSGGOG00000025856) SOCS2 (ENSGGOG00000010194) MRPL42 (ENSGGOG00000022760) ENSGGOG00000024332 ENSGGOG00000014324 EEA1 (ENSGGOG00000005235) ENSGGOG00000014096 ENSGGOG00000014092 ENSGGOG00000011891 ENSGGOG00000011882 ENSGGOG00000025615 Atlantogenata ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Afrotheria ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Tenrec MODERN SPECIES 8989 KLHDC1 (ENSETEG00000002484) ENSETEG00000002482 ##22 Marsupialia ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Marsupialia_b ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Diprotodontia ANCESTRAL SPECIES ENSGT00390000018706.m.b.b ##22 Wallaby MODERN SPECIES 249 ENSMEUG00000015798 ##22 Theria ANCESTRAL SPECIES 259 ENSGT00950000185529 ENSGT00390000018706.m.a ##22 Eutheria ANCESTRAL SPECIES 229 ENSGT00950000185529 ENSGT00390000018706.m.a ##22 Boreoeutheria ANCESTRAL SPECIES 9 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.a #22 ENSGT00950000185529 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Euarchontoglires ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Glires ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Rodentia ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Sciuridae ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Marmotini ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Marmotini_b ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Squirrel MODERN SPECIES 141 TLK2 (ENSSTOG00000010297) MRC2 (ENSSTOG00000029005) MARCHF10 (ENSSTOG00000022696) TANC2 (ENSSTOG00000009340) CYB561 (ENSSTOG00000013053) ACE (ENSSTOG00000009371) ENSSTOG00000024439 KCNH6 (ENSSTOG00000009407) DCAF7 (ENSSTOG00000027877) TACO1 (ENSSTOG00000009424) MAP3K3 (ENSSTOG00000008864) ENSSTOG00000028780 LIMD2 (ENSSTOG00000008884) STRADA (ENSSTOG00000008891) CCDC47 (ENSSTOG00000008908) ENSSTOG00000033061 ##22 ENSSTOG00000026806 DDX42 (ENSSTOG00000008922) FTSJ3 (ENSSTOG00000021265) ENSSTOG00000008945 SMARCD2 (ENSSTOG00000008962) ENSSTOG00000026223 ENSSTOG00000008984 CD79B (ENSSTOG00000009000) SCN4A (ENSSTOG00000009013) PRR29 (ENSSTOG00000030600) ICAM2 (ENSSTOG00000009058) ERN1 (ENSSTOG00000009067) TEX2 (ENSSTOG00000028689) PECAM1 (ENSSTOG00000021605) POLG2 (ENSSTOG00000012523) Hystricomorpha ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Long-tailed chinchilla MODERN SPECIES 131 DQX1 (ENSCLAG00000007521) AUP1 (ENSCLAG00000006421) HTRA2 (ENSCLAG00000007086) LOXL3 (ENSCLAG00000006711) DOK1 (ENSCLAG00000006260) M1AP (ENSCLAG00000005763) SEMA4F (ENSCLAG00000005573) ENSCLAG00000006297 HK2 (ENSCLAG00000005143) POLE4 (ENSCLAG00000004786) TACR1 (ENSCLAG00000004754) EVA1A (ENSCLAG00000004417) MRPL19 (ENSCLAG00000016582) GCFC2 (ENSCLAG00000012347) LRRTM4 (ENSCLAG00000007091) ENSCLAG00000006062 ##22 ENSCLAG00000005804 ENSCLAG00000006327 ENSCLAG00000005858 LRRTM1 (ENSCLAG00000005364) CTNNA2 (ENSCLAG00000013755) ENSCLAG00000009325 SUCLG1 (ENSCLAG00000008580) DNAH6 (ENSCLAG00000006035) TMSB10 (ENSCLAG00000010365) KCMF1 (ENSCLAG00000009986) TCF7L1 (ENSCLAG00000007414) RETSAT (ENSCLAG00000008939) ELMOD3 (ENSCLAG00000009003) CAPG (ENSCLAG00000004481) ENSCLAG00000006141 Naked mole-rat female MODERN SPECIES 20 ENSHGLG00000045127 ENSHGLG00000007906 ENSHGLG00000008225 ENSHGLG00000036147 ENSHGLG00000048887 ENSHGLG00000017330 ENSHGLG00000048131 ENSHGLG00000017243 ENSHGLG00000004698 ENSHGLG00000015604 ENSHGLG00000015659 ENSHGLG00000035430 GORAB (ENSHGLG00000042352) ENSHGLG00000042460 ENSHGLG00000020098 ENSHGLG00000019125 ##22 ENSHGLG00000038928 ENSHGLG00000021140 ENSHGLG00000036520 ENSHGLG00000019520 ENSHGLG00000018896 METTL18 (ENSHGLG00000020074) ENSHGLG00000002768 SELL (ENSHGLG00000048749) SELP (ENSHGLG00000001876) F5 (ENSHGLG00000002250) SLC19A2 (ENSHGLG00000001890) ENSHGLG00000040907 ENSHGLG00000050690 BLZF1 (ENSHGLG00000003011) NME7 (ENSHGLG00000002119) Rodentia_B ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Myomorpha ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Muroidea ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1838 ENSNGAG00000013469 ENSNGAG00000020068 Minar1 (ENSNGAG00000020591) Tmed3 (ENSNGAG00000011979) Ankrd34c (ENSNGAG00000014730) Rasgrf1 (ENSNGAG00000000095) ENSNGAG00000000798 ##22 Ctsh (ENSNGAG00000012880) ENSNGAG00000003161 ENSNGAG00000002875 Tbc1d2b (ENSNGAG00000011997) ENSNGAG00000012237 Cib2 (ENSNGAG00000018891) Idh3a (ENSNGAG00000000585) Acsbg1 (ENSNGAG00000011166) ENSNGAG00000007927 ENSNGAG00000013635 Skic8 (ENSNGAG00000017454) Crabp1 (ENSNGAG00000016008) Ireb2 (ENSNGAG00000017333) Hykk (ENSNGAG00000012055) Psma4 (ENSNGAG00000017002) Upper Galilee mountains blind mole rat MODERN SPECIES 1624 Zfp454 (ENSNGAG00000001170) Grm6 (ENSNGAG00000000051) Zfp879 (ENSNGAG00000010850) Zfp354c (ENSNGAG00000013055) Adamts2 (ENSNGAG00000007774) Rufy1 (ENSNGAG00000014023) Hnrnph1 (ENSNGAG00000014666) ENSNGAG00000019073 Canx (ENSNGAG00000009718) Maml1 (ENSNGAG00000007418) ENSNGAG00000019905 Mgat4b (ENSNGAG00000011567) Sqstm1 (ENSNGAG00000000111) Mrnip (ENSNGAG00000019013) Tbc1d9b (ENSNGAG00000020655) ENSNGAG00000013038 ##22 Rnf130 (ENSNGAG00000000237) Rasgef1c (ENSNGAG00000020883) Mapk9 (ENSNGAG00000019965) Gfpt2 (ENSNGAG00000014610) Cnot6 (ENSNGAG00000008269) Scgb3a1 (ENSNGAG00000011521) Flt4 (ENSNGAG00000013547) Muroidea_A ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Cricetidae ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Cricetinae ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Chinese hamster chok1gshd MODERN SPECIES 310 Naalad2 (ENSCGRG00001017192) Chordc1 (ENSCGRG00001004673) ENSCGRG00001007587 ##22 Fat3 (ENSCGRG00001016740) Mtnr1b (ENSCGRG00001017947) Slc36a4 (ENSCGRG00001005789) Deup1 (ENSCGRG00001012085) Smco4 (ENSCGRG00001013247) ENSCGRG00001018019 Cep295 (ENSCGRG00001000538) Taf1d (ENSCGRG00001004962) 4931406C07Rik (ENSCGRG00001008949) MED17 (ENSCGRG00001017473) Vstm5 (ENSCGRG00001006156) Hephl1 (ENSCGRG00001014172) PANX (ENSCGRG00001016361) Izumo1r (ENSCGRG00001016589) Gpr83 (ENSCGRG00001018677) Murinae ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Mus ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Mus_A ANCESTRAL SPECIES 14 ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.b.b.f.b ##22 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00860000136215 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Mus_B ANCESTRAL SPECIES 13 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00860000136215 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Mus_C ANCESTRAL SPECIES 10 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00860000136215 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 spretus MODERN SPECIES 4 Zfp366 (MGP_SPRETEiJ_G0019710) #7 H2bl1 (MGP_SPRETEiJ_G0019709) Tnpo1 (MGP_SPRETEiJ_G0019708) #9 Fcho2 (MGP_SPRETEiJ_G0019707) #11 Tmem171 (MGP_SPRETEiJ_G0019706) #12 Tmem174 (MGP_SPRETEiJ_G0019705) #13 Foxd1 (MGP_SPRETEiJ_G0019704) Btf3 (MGP_SPRETEiJ_G0019703) ##15 MGP_SPRETEiJ_G0019702 Ankra2 (MGP_SPRETEiJ_G0019701) #16 Utp15 (MGP_SPRETEiJ_G0019700) #17 Arhgef28 (MGP_SPRETEiJ_G0019699) #18 Enc1 (MGP_SPRETEiJ_G0019698) #19 Hexb (MGP_SPRETEiJ_G0019697) #20 Gfm2 (MGP_SPRETEiJ_G0019696) #21 MGP_SPRETEiJ_G0019695 ##22 Fam169a (MGP_SPRETEiJ_G0019694) #24 1700029F12Rik (MGP_SPRETEiJ_G0019693) Gcnt4 (MGP_SPRETEiJ_G0019692) Hmgcr (MGP_SPRETEiJ_G0019691) #28 Cert1 (MGP_SPRETEiJ_G0019690) #29 MGP_SPRETEiJ_G0019689 Polk (MGP_SPRETEiJ_G0019688) #30 Ankdd1b (MGP_SPRETEiJ_G0019687) #31 Poc5 (MGP_SPRETEiJ_G0019686) #32 Sv2c (MGP_SPRETEiJ_G0019685) #35 F2rl2 (MGP_SPRETEiJ_G0019684) #36 Iqgap2 (MGP_SPRETEiJ_G0019683) #37 F2r (MGP_SPRETEiJ_G0019682) ##36 F2rl1 (MGP_SPRETEiJ_G0019681) ##36 S100z (MGP_SPRETEiJ_G0019680) Steppe mouse MODERN SPECIES 1640 ENSMSIG00000008803 ##22 Fam169a (ENSMSIG00000008753) #24 Primates ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Catarrhini ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00940000161374.b.b ENSGT00940000161374.a.a.a ENSGT00820000127150 ENSGT00940000155863 ENSGT00390000006096.a.a ENSGT00940000161011 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b ENSGT00420000029746.e.a.b.a.a.a.a.b.a ENSGT00940000162954 ENSGT00940000155030 ENSGT00940000156349 ENSGT00420000029746.e.a.b.a.a.a.a.a.b.a.a ENSGT00390000000684 ENSGT00950000182849.A.f.b ENSGT00390000007258 ENSGT00390000018706.m.a ##22 ENSGT00940000157203 ENSGT00390000002799 ENSGT00390000013847 ENSGT01030000234539.a.a.b.a.a ENSGT00530000063074.a ENSGT00940000158423 ENSGT00390000014273.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000012355.B.b ENSGT01060000248645 ENSGT00940000158522 ENSGT00950000183112.b.b ENSGT00420000029746.e.a.b.b.b.a Vervet Monkey MODERN SPECIES 12 PHGDH (ENSCSAG00000001719) HMGCS2 (ENSCSAG00000001721) REG4 (ENSCSAG00000001723) ENSCSAG00000001730 ENSCSAG00000001734 ADAM30 (ENSCSAG00000001737) NOTCH2 (ENSCSAG00000001741) SEC22B (ENSCSAG00000001743) ENSCSAG00000000175 PDE4DIP (ENSCSAG00000001746) ENSCSAG00000001749 ENSCSAG00000001753 ENSCSAG00000001755 PDZK1 (ENSCSAG00000001757) CD160 (ENSCSAG00000001758) ENSCSAG00000000176 ##22 RNF115 (ENSCSAG00000001760) POLR3C (ENSCSAG00000001762) NUDT17 (ENSCSAG00000001766) PIAS3 (ENSCSAG00000001768) ANKRD35 (ENSCSAG00000001771) ITGA10 (ENSCSAG00000001775) PEX11B (ENSCSAG00000001777) ENSCSAG00000001778 RBM8A (ENSCSAG00000001779) LIX1L (ENSCSAG00000001780) ANKRD34A (ENSCSAG00000000177) POLR3GL (ENSCSAG00000001781) TXNIP (ENSCSAG00000001782) HJV (ENSCSAG00000001783) MLLT11 (ENSCSAG00000000178) Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 ENSGT00910000147045 ENSGT00950000183083.a.d.a ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000154384.h.b ENSGT00390000018706.m.a ##22 ENSGT00940000157461 ENSGT00940000163242.e ENSGT00940000155405.jb ENSGT00940000157691 ENSGT00940000156573 ENSGT00910000147762 ENSGT00390000016607.a ENSGT00940000160579 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D ENSGT00950000183065.A ENSGT00390000017491.s.a.b.a ENSGT00940000154489.A Cercopithecinae_b ANCESTRAL SPECIES 31 ENSGT00940000154699 ENSGT00910000147045 ENSGT00390000008820.e.b.a.a.a.a ENSGT00950000183083.a.d.a ENSGT00940000157387 ENSGT00390000006883 ENSGT00440000034918.r.i ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000154384.h.b ENSGT00390000018706.m.a ##22 ENSGT00940000157461 ENSGT00940000163242.e ENSGT00940000155405.jb ENSGT00940000157691 ENSGT00940000156573 ENSGT00910000147762 ENSGT00390000016607.a ENSGT00940000160579 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D ENSGT00950000183065.A ENSGT00390000017491.s.a.b.a ENSGT00940000154489.A Cercopithecinae_d ANCESTRAL SPECIES 37 ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 ENSGT00910000147045 ENSGT00390000008820.e.b.a.a.a.a ENSGT00950000183083.a.d.a ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000154384.h.b ENSGT00390000018706.m.a ##22 ENSGT00940000157461 ENSGT00940000155405.jb ENSGT00940000157691 ENSGT00940000156573 ENSGT00910000147762 ENSGT00390000016607.a ENSGT00940000160579 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.A ENSGT00390000017491.s.a.b.a ENSGT00940000154489.A ENSGT00940000155047 ENSGT00940000153147.m.a.b.i.b Sooty mangabey MODERN SPECIES 336 TPM1 (ENSCATG00000043567) TLN2 (ENSCATG00000039955) ENSCATG00000020724 VPS13C (ENSCATG00000041944) RORA (ENSCATG00000041834) ICE2 (ENSCATG00000043106) ANXA2 (ENSCATG00000043236) ENSCATG00000034012 FOXB1 (ENSCATG00000021214) ENSCATG00000033079 BNIP2 (ENSCATG00000039445) ENSCATG00000040454 GCNT3 (ENSCATG00000040930) FAM81A (ENSCATG00000031214) ENSCATG00000043413 ENSCATG00000030798 ##22 MYO1E (ENSCATG00000034350) CCNB2 (ENSCATG00000037096) RNF111 (ENSCATG00000040370) SLTM (ENSCATG00000030254) MINDY2 (ENSCATG00000043333) ADAM10 (ENSCATG00000041125) LIPC (ENSCATG00000039767) ALDH1A2 (ENSCATG00000044324) AQP9 (ENSCATG00000044019) MYZAP (ENSCATG00000041308) CGNL1 (ENSCATG00000036319) TCF12 (ENSCATG00000014938) ENSCATG00000042348 ZNF280D (ENSCATG00000012535) MNS1 (ENSCATG00000038230) Drill MODERN SPECIES 868 ENSMLEG00000029597 BNIP2 (ENSMLEG00000043321) GTF2A2 (ENSMLEG00000037560) GCNT3 (ENSMLEG00000027511) ENSMLEG00000035811 FAM81A (ENSMLEG00000041731) ENSMLEG00000014742 ##22 MYO1E (ENSMLEG00000028117) CCNB2 (ENSMLEG00000032744) RNF111 (ENSMLEG00000043927) SLTM (ENSMLEG00000043355) ENSMLEG00000028041 MINDY2 (ENSMLEG00000032776) ADAM10 (ENSMLEG00000044106) LIPC (ENSMLEG00000030869) AQP9 (ENSMLEG00000041087) ALDH1A2 (ENSMLEG00000036167) MYZAP (ENSMLEG00000005112) ENSMLEG00000038639 CGNL1 (ENSMLEG00000028818) ENSMLEG00000037759 TCF12 (ENSMLEG00000028923) Macaca ANCESTRAL SPECIES 1 ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 ENSGT00910000147045 ENSGT00950000183083.a.d.a ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000154384.h.b ENSGT00390000018706.m.a ##22 ENSGT00940000163242.e ENSGT00940000157461 ENSGT00940000155405.jb ENSGT00940000157691 ENSGT00940000156573 ENSGT00910000147762 ENSGT00390000016607.a ENSGT00940000160579 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.A ENSGT00940000154489.A ENSGT00940000155047 ENSGT00940000153147.m.a.b.i.b Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 556 ENSMNEG00000044623 ENSMNEG00000028701 ZNF697 (ENSMNEG00000032913) PHGDH (ENSMNEG00000039018) HMGCS2 (ENSMNEG00000037230) REG4 (ENSMNEG00000028106) ENSMNEG00000044277 NOTCH2 (ENSMNEG00000028518) SEC22B (ENSMNEG00000042539) PDE4DIP (ENSMNEG00000022523) ENSMNEG00000037985 ENSMNEG00000030638 ENSMNEG00000030135 PDZK1 (ENSMNEG00000021393) CD160 (ENSMNEG00000043287) ENSMNEG00000033399 ##22 RNF115 (ENSMNEG00000031592) POLR3C (ENSMNEG00000040944) NUDT17 (ENSMNEG00000041081) PIAS3 (ENSMNEG00000036118) ANKRD35 (ENSMNEG00000031803) ITGA10 (ENSMNEG00000035387) PEX11B (ENSMNEG00000029865) ENSMNEG00000042887 RBM8A (ENSMNEG00000040422) LIX1L (ENSMNEG00000034725) ANKRD34A (ENSMNEG00000019192) POLR3GL (ENSMNEG00000029007) TXNIP (ENSMNEG00000042880) HJV (ENSMNEG00000044723) ENSMNEG00000045234 Pig-tailed macaque MODERN SPECIES 77 LACTB (ENSMNEG00000032367) TPM1 (ENSMNEG00000031245) ENSMNEG00000034201 TLN2 (ENSMNEG00000028802) ENSMNEG00000013327 VPS13C (ENSMNEG00000030758) RORA (ENSMNEG00000020975) ICE2 (ENSMNEG00000034514) ANXA2 (ENSMNEG00000043015) FOXB1 (ENSMNEG00000015910) BNIP2 (ENSMNEG00000033516) GTF2A2 (ENSMNEG00000030439) GCNT3 (ENSMNEG00000013859) FAM81A (ENSMNEG00000029984) ENSMNEG00000038663 ENSMNEG00000041217 ##22 MYO1E (ENSMNEG00000002815) CCNB2 (ENSMNEG00000038718) RNF111 (ENSMNEG00000004287) SLTM (ENSMNEG00000025105) ENSMNEG00000021451 MINDY2 (ENSMNEG00000042969) ADAM10 (ENSMNEG00000040922) LIPC (ENSMNEG00000034628) ALDH1A2 (ENSMNEG00000035893) AQP9 (ENSMNEG00000041178) ENSMNEG00000031595 MYZAP (ENSMNEG00000036884) CGNL1 (ENSMNEG00000036681) TCF12 (ENSMNEG00000034483) ENSMNEG00000038740 Hominoidea ANCESTRAL SPECIES 7 ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000159692 ENSGT00390000014507.b ENSGT00390000008827 ENSGT00940000157898 ENSGT00950000182939.b.a.a ENSGT00940000158759 ENSGT00390000012818.o.a.a.a.b ENSGT01010000222851 ENSGT00920000149095.a ENSGT00550000074817.e.b ENSGT00940000163411 ENSGT00390000014063 ENSGT00940000154527.a.a.a ENSGT00390000018706.m.a ##22 ENSGT00940000154248.a ENSGT00940000160163 ENSGT00940000157007 ENSGT00950000182952.B ENSGT00940000161149 ENSGT00940000161815 ENSGT00940000158040 ENSGT01030000234555.a.a.b.a.a ENSGT00950000182959.a.b.b.b ENSGT01050000244900.a.a.a.a.a ENSGT00390000009310.j.a ENSGT00940000163241 ENSGT00940000160784 ENSGT00940000154563.r ENSGT00940000155199.lb Gibbon DUPLICATION Gibbon MODERN SPECIES 24 LRP8 (ENSNLEG00000017986) ENSNLEG00000009256 UGT2B15 (ENSNLEG00000009240) TMPRSS11E (ENSNLEG00000009223) YTHDC1 (ENSNLEG00000009202) TMPRSS11F (ENSNLEG00000009193) TMPRSS11A (ENSNLEG00000009182) TMPRSS11D (ENSNLEG00000009163) GNRHR (ENSNLEG00000009158) UBA6 (ENSNLEG00000009086) STAP1 (ENSNLEG00000009082) CENPC (ENSNLEG00000009058) EPHA5 (ENSNLEG00000008987) ENSNLEG00000030813 TECRL (ENSNLEG00000008982) ENSNLEG00000033354 ##22 ADGRL3 (ENSNLEG00000008957) ENSNLEG00000028144 ENSNLEG00000028744 IGFBP7 (ENSNLEG00000029053) ENSNLEG00000029063 ENSNLEG00000031259 POLR2B (ENSNLEG00000008874) NOA1 (ENSNLEG00000008853) REST (ENSNLEG00000008836) ENSNLEG00000008829 HOPX (ENSNLEG00000033904) THEGL (ENSNLEG00000035230) ENSNLEG00000034401 SRP72 (ENSNLEG00000008806) PAICS (ENSNLEG00000008786) Gibbon MODERN SPECIES 24 ENSNLEG00000029210 ENSNLEG00000035718 FLT3 (ENSNLEG00000000372) URAD (ENSNLEG00000000369) CDX2 (ENSNLEG00000000365) PDX1 (ENSNLEG00000000362) GSX1 (ENSNLEG00000000360) ENSNLEG00000000358 LNX2 (ENSNLEG00000000345) MTIF3 (ENSNLEG00000000343) GTF3A (ENSNLEG00000000331) RASL11A (ENSNLEG00000000329) ENSNLEG00000000327 ENSNLEG00000000323 ATP2B4 (ENSNLEG00000018117) ENSNLEG00000033057 ##22 OPTC (ENSNLEG00000018116) PRELP (ENSNLEG00000018115) FMOD (ENSNLEG00000018114) BTG2 (ENSNLEG00000034785) CHIT1 (ENSNLEG00000018112) CHI3L1 (ENSNLEG00000018111) MYBPH (ENSNLEG00000018110) ADORA1 (ENSNLEG00000018109) MYOG (ENSNLEG00000018108) PPFIA4 (ENSNLEG00000018107) TMEM183A (ENSNLEG00000018106) ENSNLEG00000031326 CYB5R1 (ENSNLEG00000033971) ADIPOR1 (ENSNLEG00000018104) KLHL12 (ENSNLEG00000018103) Hominidae ANCESTRAL SPECIES 6 ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000159692 ENSGT00390000014507.b ENSGT00390000008827 ENSGT00940000157898 ENSGT00950000182939.b.a.a ENSGT00940000158759 ENSGT00390000012818.o.a.a.a.b ENSGT01010000222851 ENSGT00920000149095.a ENSGT00550000074817.e.b ENSGT00940000163411 ENSGT00390000014063 ENSGT00940000154527.a.a.a ENSGT00390000018706.m.a ##22 ENSGT00940000154248.a ENSGT00940000160163 ENSGT00940000157007 ENSGT00950000182952.B ENSGT00940000161149 ENSGT00940000161815 ENSGT00940000158040 ENSGT01030000234555.a.a.b.a.a ENSGT00950000182959.a.b.b.b ENSGT01050000244900.a.a.a.a.a ENSGT00390000009310.j.a ENSGT00940000163241 ENSGT00940000160784 ENSGT00940000154563.r ENSGT00940000155199.lb Orangutan MODERN SPECIES 20 RABGEF1 (ENSPPYG00000017520) KCTD7 (ENSPPYG00000031460) TPST1 (ENSPPYG00000017524) ENSPPYG00000017525 ASL (ENSPPYG00000017526) ENSPPYG00000039931 ENSPPYG00000017527 ENSPPYG00000020034 GUSB (ENSPPYG00000019920) ENSPPYG00000036119 ENSPPYG00000035560 ENSPPYG00000040089 ENSPPYG00000041304 ENSPPYG00000038543 ENSPPYG00000036157 ENSPPYG00000034835 ##22 ENSPPYG00000033908 ENSPPYG00000036217 VOPP1 (ENSPPYG00000018284) LANCL2 (ENSPPYG00000038587) EGFR (ENSPPYG00000017549) SEC61G (ENSPPYG00000017551) ENSPPYG00000017552 POM121L12 (ENSPPYG00000017554) COBL (ENSPPYG00000017556) GRB10 (ENSPPYG00000017557) DDC (ENSPPYG00000017558) FIGNL1 (ENSPPYG00000017560) IKZF1 (ENSPPYG00000017561) SPATA48 (ENSPPYG00000017562) ZPBP (ENSPPYG00000017563) Homo/Pan/Gorilla group ANCESTRAL SPECIES 6 ENSGT00940000159692 ENSGT00390000014507.b ENSGT00390000008827 ENSGT00940000157898 ENSGT00950000182939.b.a.a ENSGT00940000158759 ENSGT00390000006350.m.a.c.b.a.a ENSGT00390000012818.o.a.a.a.b ENSGT01010000222851.d ENSGT00390000016972.a.a.b.b.b.a.a.b ENSGT00920000149095.a.g ENSGT00550000074817.e.b ENSGT00940000163411 ENSGT00390000014063 ENSGT00940000154527.a.a.a ENSGT00390000018706.m.a ##22 ENSGT00940000154248.a ENSGT00940000160163 ENSGT00940000157007 ENSGT00950000182952.B ENSGT00940000161149 ENSGT00940000161815 ENSGT00940000158040 ENSGT01030000234555.a.a.b.a.a ENSGT00950000182959.a.b.b.b ENSGT01050000244900.a.a.a.a.a ENSGT00390000009310.j.a ENSGT00940000163241 ENSGT00940000160784 ENSGT00940000154563.r ENSGT00940000155199.lb Gorilla MODERN SPECIES PLEKHA6 (ENSGGOG00000002458) GOLT1A (ENSGGOG00000011192) KISS1 (ENSGGOG00000002282) REN (ENSGGOG00000000840) ETNK2 (ENSGGOG00000012777) SOX13 (ENSGGOG00000012765) ENSGGOG00000022860 SNRPE (ENSGGOG00000043102) ENSGGOG00000043084 ENSGGOG00000000054 ENSGGOG00000023830 ZC3H11A (ENSGGOG00000004438) LAX1 (ENSGGOG00000010494) ENSGGOG00000037477 ENSGGOG00000010467 ENSGGOG00000037269 ##22 OPTC (ENSGGOG00000015966) PRELP (ENSGGOG00000015960) ENSGGOG00000038088 FMOD (ENSGGOG00000011874) BTG2 (ENSGGOG00000001857) CHIT1 (ENSGGOG00000011183) CHI3L1 (ENSGGOG00000009912) MYBPH (ENSGGOG00000009899) ADORA1 (ENSGGOG00000009895) MYOG (ENSGGOG00000002115) PPFIA4 (ENSGGOG00000013912) TMEM183A (ENSGGOG00000009834) ENSGGOG00000039922 CYB5R1 (ENSGGOG00000005136) ADIPOR1 (ENSGGOG00000005131) Homo/Pan group ANCESTRAL SPECIES 7 ENSGT00940000159692 ENSGT00390000014507.b ENSGT00390000008827 ENSGT00940000157898 ENSGT00950000182939.b.a.a ENSGT00940000158759 ENSGT00390000006350.m.a.c.b.a.a ENSGT00390000012818.o.a.a.a.b ENSGT01010000222851.d ENSGT00390000016972.a.a.b.b.b.a.a.b ENSGT00920000149095.a.g ENSGT00550000074817.e.b ENSGT00940000163411 ENSGT00390000014063 ENSGT00940000154527.a.a.a ENSGT00390000018706.m.a ##22 ENSGT00940000154248.a ENSGT00940000160163 ENSGT00940000157007 ENSGT00950000182952.B ENSGT00940000161149 ENSGT00940000161815 ENSGT00940000158040 ENSGT01030000234555.a.a.b.a.a ENSGT00950000182959.a.b.b.b ENSGT01050000244900.a.a.a.a.a ENSGT00390000009310.j.a ENSGT00940000163241 ENSGT00940000160784 ENSGT00940000154563.r ENSGT00940000155199.lb Pan ANCESTRAL SPECIES ENSGT00940000159692 ENSGT00390000014507.b ENSGT00390000008827 ENSGT00940000157898 ENSGT00950000182939.b.a.a ENSGT00940000158759 ENSGT00390000006350.m.a.c.b.a.a ENSGT00390000012818.o.a.a.a.b ENSGT01010000222851.d ENSGT00390000016972.a.a.b.b.b.a.a.b ENSGT00920000149095.a.g ENSGT00550000074817.e.b ENSGT00940000163411 ENSGT00390000014063 ENSGT00940000154527.a.a.a ENSGT00390000018706.m.a ##22 ENSGT00940000154248.a ENSGT00940000160163 ENSGT00940000157007 ENSGT00950000182952.B ENSGT00940000161149 ENSGT00940000161815 ENSGT00940000158040 ENSGT01030000234555.a.a.b.a.a ENSGT00950000182959.a.b.b.b ENSGT01050000244900.a.a.a.a.a ENSGT00390000009310.j.a ENSGT00940000163241 ENSGT00940000160784 ENSGT00940000154563.r ENSGT00940000155199.lb Bonobo MODERN SPECIES PLEKHA6 (ENSPPAG00000035072) GOLT1A (ENSPPAG00000026595) KISS1 (ENSPPAG00000036121) REN (ENSPPAG00000040565) ETNK2 (ENSPPAG00000035365) SOX13 (ENSPPAG00000029460) ENSPPAG00000036059 SNRPE (ENSPPAG00000041057) ENSPPAG00000038394 ENSPPAG00000034231 ZC3H11A (ENSPPAG00000039060) ENSPPAG00000033955 ZBED6 (ENSPPAG00000026325) LAX1 (ENSPPAG00000029666) ATP2B4 (ENSPPAG00000041080) ENSPPAG00000029364 ##22 OPTC (ENSPPAG00000042530) PRELP (ENSPPAG00000031486) FMOD (ENSPPAG00000005300) BTG2 (ENSPPAG00000008433) ENSPPAG00000040620 CHI3L1 (ENSPPAG00000033305) MYBPH (ENSPPAG00000007115) ADORA1 (ENSPPAG00000034092) MYOG (ENSPPAG00000029832) PPFIA4 (ENSPPAG00000024271) TMEM183A (ENSPPAG00000025262) ENSPPAG00000040754 CYB5R1 (ENSPPAG00000033586) ADIPOR1 (ENSPPAG00000040124) KLHL12 (ENSPPAG00000041960) Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 22 ZNF169 (ENSPTRG00000021131) ENSPTRG00000041325 MFSD14B (ENSPTRG00000021134) FBP2 (ENSPTRG00000021136) FBP1 (ENSPTRG00000021138) AOPEP (ENSPTRG00000021139) FANCC (ENSPTRG00000021140) ENSPTRG00000039664 ENSPTRG00000049213 PTCH1 (ENSPTRG00000046951) ERCC6L2 (ENSPTRG00000048689) ENSPTRG00000043521 HSD17B3 (ENSPTRG00000021150) SLC35D2 (ENSPTRG00000021151) ZNF367 (ENSPTRG00000021153) ENSPTRG00000046335 ##22 HABP4 (ENSPTRG00000021154) CDC14B (ENSPTRG00000021155) PRXL2C (ENSPTRG00000021156) ENSPTRG00000044248 ZNF510 (ENSPTRG00000023307) ZNF782 (ENSPTRG00000021157) ENSPTRG00000021132 ENSPTRG00000021159 CTSV (ENSPTRG00000002675) ENSPTRG00000029267 ENSPTRG00000049659 CCDC180 (ENSPTRG00000021162) TDRD7 (ENSPTRG00000022912) TMOD1 (ENSPTRG00000021165) TSTD2 (ENSPTRG00000021166) Chimpanzee MODERN SPECIES PIK3C2B (ENSPTRG00000001888) PPP1R15B (ENSPTRG00000001887) ENSPTRG00000047717 PLEKHA6 (ENSPTRG00000001886) GOLT1A (ENSPTRG00000001885) KISS1 (ENSPTRG00000001884) REN (ENSPTRG00000001883) ETNK2 (ENSPTRG00000001882) SOX13 (ENSPTRG00000001881) SNRPE (ENSPTRG00000043604) ENSPTRG00000041475 ENSPTRG00000048078 ZC3H11A (ENSPTRG00000001876) LAX1 (ENSPTRG00000001874) ATP2B4 (ENSPTRG00000001873) ENSPTRG00000044182 ##22 OPTC (ENSPTRG00000024044) PRELP (ENSPTRG00000022635) FMOD (ENSPTRG00000001872) BTG2 (ENSPTRG00000001871) CHIT1 (ENSPTRG00000001870) CHI3L1 (ENSPTRG00000001869) MYBPH (ENSPTRG00000001868) ADORA1 (ENSPTRG00000001867) MYOG (ENSPTRG00000001866) PPFIA4 (ENSPTRG00000050591) TMEM183A (ENSPTRG00000001864) ENSPTRG00000044445 CYB5R1 (ENSPTRG00000001863) ADIPOR1 (ENSPTRG00000001862) KLHL12 (ENSPTRG00000001861) Platyrrhini ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Mas night monkey MODERN SPECIES 35 ENSANAG00000021966 ##22 Cebidae ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Marmoset MODERN SPECIES 4 ENSCJAG00000042724 ELP2 (ENSCJAG00000021063) SLC39A6 (ENSCJAG00000021051) MOCOS (ENSCJAG00000021092) ENSCJAG00000071721 FHOD3 (ENSCJAG00000021104) TPGS2 (ENSCJAG00000021123) KIAA1328 (ENSCJAG00000021130) CELF4 (ENSCJAG00000021135) ENSCJAG00000077343 ENSCJAG00000066717 ENSCJAG00000082931 ENSCJAG00000052165 ENSCJAG00000079472 PIK3C3 (ENSCJAG00000003901) ENSCJAG00000023333 ##22 RIT2 (ENSCJAG00000003987) SYT4 (ENSCJAG00000004002) ENSCJAG00000082171 SETBP1 (ENSCJAG00000004035) SLC14A2 (ENSCJAG00000004051) ENSCJAG00000048632 EPG5 (ENSCJAG00000008484) SIGLEC15 (ENSCJAG00000008603) ENSCJAG00000008319 HAUS1 (ENSCJAG00000008303) ENSCJAG00000079309 C18orf25 (ENSCJAG00000008285) ENSCJAG00000075854 RNF165 (ENSCJAG00000073766) LOXHD1 (ENSCJAG00000008221) Cebidae_a ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Capuchin MODERN SPECIES 599 ENSCCAG00000025339 ENSCCAG00000023388 ENSCCAG00000025480 ##22 SYT10 (ENSCCAG00000035705) Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 88 ENSSBOG00000031120 ABCA5 (ENSSBOG00000025946) MAP2K6 (ENSSBOG00000003586) KCNJ16 (ENSSBOG00000025747) KCNJ2 (ENSSBOG00000017466) ENSSBOG00000032441 SOX9 (ENSSBOG00000030686) SLC39A11 (ENSSBOG00000036136) SSTR2 (ENSSBOG00000019147) COG1 (ENSSBOG00000022132) FAM104A (ENSSBOG00000017682) C17orf80 (ENSSBOG00000026614) CPSF4L (ENSSBOG00000033940) ENSSBOG00000035086 SDK2 (ENSSBOG00000011324) ENSSBOG00000019924 ##22 RPL38 (ENSSBOG00000033282) TTYH2 (ENSSBOG00000023406) DNAI2 (ENSSBOG00000034286) KIF19 (ENSSBOG00000027134) BTBD17 (ENSSBOG00000034623) ##19 GPR142 (ENSSBOG00000026458) GPRC5C (ENSSBOG00000027422) CD300A (ENSSBOG00000030593) CD300LB (ENSSBOG00000027883) CD300C (ENSSBOG00000025855) CD300H (ENSSBOG00000014815) CD300LF (ENSSBOG00000021597) RAB37 (ENSSBOG00000033362) NHERF1 (ENSSBOG00000027825) NAT9 (ENSSBOG00000034130) Bolivian squirrel monkey MODERN SPECIES 86 SCPEP1 (ENSSBOG00000028273) COIL (ENSSBOG00000035968) TRIM25 (ENSSBOG00000008235) DGKE (ENSSBOG00000034463) C17orf67 (ENSSBOG00000032148) NOG (ENSSBOG00000006250) ENSSBOG00000023715 ANKFN1 (ENSSBOG00000028809) PCTP (ENSSBOG00000033719) TMEM100 (ENSSBOG00000018187) ENSSBOG00000021163 HLF (ENSSBOG00000015535) STXBP4 (ENSSBOG00000034723) COX11 (ENSSBOG00000024452) TOM1L1 (ENSSBOG00000009970) ENSSBOG00000029628 ##22 CA10 (ENSSBOG00000026052) ENSSBOG00000024404 MBTD1 (ENSSBOG00000008681) ENSSBOG00000031272 SPAG9 (ENSSBOG00000017078) TOB1 (ENSSBOG00000025245) WFIKKN2 (ENSSBOG00000032107) LUC7L3 (ENSSBOG00000034373) ANKRD40 (ENSSBOG00000029842) ABCC3 (ENSSBOG00000034250) CACNA1G (ENSSBOG00000035938) SPATA20 (ENSSBOG00000021033) EPN3 (ENSSBOG00000034210) MYCBPAP (ENSSBOG00000023288) RSAD1 (ENSSBOG00000021184) Bolivian squirrel monkey MODERN SPECIES 136 ZDHHC24 (ENSSBOG00000030171) BBS1 (ENSSBOG00000022111) DPP3 (ENSSBOG00000030294) PELI3 (ENSSBOG00000013273) MRPL11 (ENSSBOG00000019968) NPAS4 (ENSSBOG00000029614) SLC29A2 (ENSSBOG00000015767) B4GAT1 (ENSSBOG00000018845) RIN1 (ENSSBOG00000034768) CD248 (ENSSBOG00000021872) TMEM151A (ENSSBOG00000028725) YIF1A (ENSSBOG00000022054) CNIH2 (ENSSBOG00000025935) RAB1B (ENSSBOG00000033554) KLC2 (ENSSBOG00000026636) ENSSBOG00000012022 ##22 PACS1 (ENSSBOG00000025535) SF3B2 (ENSSBOG00000026337) GAL3ST3 (ENSSBOG00000033651) CATSPER1 (ENSSBOG00000035318) CST6 (ENSSBOG00000025806) BANF1 (ENSSBOG00000033117) EIF1AD (ENSSBOG00000023159) SART1 (ENSSBOG00000023102) TSGA10IP (ENSSBOG00000032087) DRAP1 (ENSSBOG00000012455) C11orf68 (ENSSBOG00000034720) FOSL1 (ENSSBOG00000034165) CCDC85B (ENSSBOG00000023803) FIBP (ENSSBOG00000035872) CTSW (ENSSBOG00000018563) Tarsier DUPLICATION Tarsier MODERN SPECIES 6018 GUCA2B (ENSTSYG00000008439) GUCA2A (ENSTSYG00000013614) FOXJ3 (ENSTSYG00000028466) ENSTSYG00000037479 RIMKLA (ENSTSYG00000008500) ZMYND12 (ENSTSYG00000005446) PPCS (ENSTSYG00000005466) ENSTSYG00000028518 ##22 ENSTSYG00000013356 Tarsier MODERN SPECIES 4016 ENSTSYG00000025506 #23 PRRC2C (ENSTSYG00000014050) ENSTSYG00000025928 MYOC (ENSTSYG00000028331) VAMP4 (ENSTSYG00000010345) METTL13 (ENSTSYG00000012467) ENSTSYG00000036023 ENSTSYG00000032279 ##22 Tarsier MODERN SPECIES 6046 ENSTSYG00000032708 ##22 CCDC112 (ENSTSYG00000003590) PGGT1B (ENSTSYG00000003558) TRIM36 (ENSTSYG00000012112) Strepsirrhini ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Lemuriformes ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Lemuriformes_a ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 556 TGFBR3 (ENSPSMG00000015750) BRDT (ENSPSMG00000015627) EPHX4 (ENSPSMG00000015559) BTBD8 (ENSPSMG00000015550) C1orf146 (ENSPSMG00000015518) GLMN (ENSPSMG00000015491) RPAP2 (ENSPSMG00000015467) GFI1 (ENSPSMG00000015439) EVI5 (ENSPSMG00000015410) ENSPSMG00000015298 DIPK1A (ENSPSMG00000015215) MTF2 (ENSPSMG00000015020) TMED5 (ENSPSMG00000014878) CCDC18 (ENSPSMG00000014808) DR1 (ENSPSMG00000014696) ENSPSMG00000014687 ##22 FNBP1L (ENSPSMG00000014651) BCAR3 (ENSPSMG00000014546) DNTTIP2 (ENSPSMG00000014510) GCLM (ENSPSMG00000014490) ABCA4 (ENSPSMG00000014392) ARHGAP29 (ENSPSMG00000014189) ABCD3 (ENSPSMG00000013980) F3 (ENSPSMG00000013868) Greater bamboo lemur MODERN SPECIES 39 ENSPSMG00000007039 ENSPSMG00000007041 ##22 SLC25A21 (ENSPSMG00000007077) PAX9 (ENSPSMG00000007091) NKX2-8 (ENSPSMG00000007100) NKX2-1 (ENSPSMG00000007112) MBIP (ENSPSMG00000007183) Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 27 ENSMICG00000044974 SHANK2 (ENSMICG00000035602) DHCR7 (ENSMICG00000017094) NADSYN1 (ENSMICG00000017100) LGALS12 (ENSMICG00000010263) TSPAN32 (ENSMICG00000045977) ENSMICG00000034071 ENSMICG00000044072 ENSMICG00000032218 ENSMICG00000043027 ENSMICG00000044564 ENSMICG00000044796 ENSMICG00000033487 ENSMICG00000008357 PTPRJ (ENSMICG00000005145) ENSMICG00000036331 ##22 ENSMICG00000032012 ENSMICG00000003903 ENSMICG00000008279 ENSMICG00000048041 ENSMICG00000002840 ENSMICG00000045888 NUP160 (ENSMICG00000011344) FNBP4 (ENSMICG00000011329) AGBL2 (ENSMICG00000011310) ENSMICG00000034382 ENSMICG00000005314 MTCH2 (ENSMICG00000027810) FAM180B (ENSMICG00000001091) NDUFS3 (ENSMICG00000045989) KBTBD4 (ENSMICG00000001087) Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 7 VPS53 (ENSMICG00000009328) TLCD3A (ENSMICG00000009347) GEMIN4 (ENSMICG00000033667) ENSMICG00000027145 GLOD4 (ENSMICG00000009361) MRM3 (ENSMICG00000031420) NXN (ENSMICG00000009368) TIMM22 (ENSMICG00000041939) ABR (ENSMICG00000009381) TRARG1 (ENSMICG00000028858) GOSR1 (ENSMICG00000007911) CPD (ENSMICG00000007896) TMIGD1 (ENSMICG00000028000) BLMH (ENSMICG00000000348) SLC6A4 (ENSMICG00000000345) ENSMICG00000046349 ##22 NSRP1 (ENSMICG00000006365) ENSMICG00000046883 ENSMICG00000028804 EFCAB5 (ENSMICG00000013739) SSH2 (ENSMICG00000005441) CORO6 (ENSMICG00000013407) ANKRD13B (ENSMICG00000013392) GIT1 (ENSMICG00000005414) TP53I13 (ENSMICG00000005403) ABHD15 (ENSMICG00000005394) TAOK1 (ENSMICG00000005354) NUFIP2 (ENSMICG00000016380) CRYBA1 (ENSMICG00000038723) MYO18A (ENSMICG00000013997) PIPOX (ENSMICG00000005380) Mouse lemur MODERN SPECIES NR1I2 (ENSMICG00000049095) CFAP91 (ENSMICG00000049028) COX17 (ENSMICG00000049148) POPDC2 (ENSMICG00000048913) PLA1A (ENSMICG00000049474) ADPRH (ENSMICG00000048870) CD80 (ENSMICG00000049031) TIMMDC1 (ENSMICG00000049136) POGLUT1 (ENSMICG00000048901) TMEM39A (ENSMICG00000049505) ARHGAP31 (ENSMICG00000049335) B4GALT4 (ENSMICG00000049037) UPK1B (ENSMICG00000049009) ENSMICG00000049260 IGSF11 (ENSMICG00000049356) ENSMICG00000049006 ##22 ENSMICG00000049499 LSAMP (ENSMICG00000048878) GAP43 (ENSMICG00000049221) ENSMICG00000049016 ZBTB20 (ENSMICG00000049480) TIGIT (ENSMICG00000048887) DRD3 (ENSMICG00000049039) QTRT2 (ENSMICG00000049101) ZDHHC23 (ENSMICG00000049429) ENSMICG00000049492 ENSMICG00000049182 ENSMICG00000049521 NAA50 (ENSMICG00000049133) USF3 (ENSMICG00000049097) SIDT1 (ENSMICG00000049213) Laurasiatheria ANCESTRAL SPECIES 8 ENSGT00390000009329.a.a ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Eulipotyphla ANCESTRAL SPECIES 202 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 Common shrew MODERN SPECIES 2545 ENSSARG00000009363 #20 GFM2 (ENSSARG00000009381) #21 ENSSARG00000009424 ##22 ENSSARG00000009434 #24 Hedgehog MODERN SPECIES 5799 ENSEEUG00000005673 ##22 FAM169A (ENSEEUG00000005767) #24 Laurasiatheria_a ANCESTRAL SPECIES 9 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Laurasiatheria_b ANCESTRAL SPECIES 9 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Laurasiatheria_c ANCESTRAL SPECIES 7 ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Chiroptera ANCESTRAL SPECIES 1 ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Megabat MODERN SPECIES 1034 HEXB (ENSPVAG00000005386) #20 GFM2 (ENSPVAG00000005391) #21 ENSPVAG00000005396 ##22 FAM169A (ENSPVAG00000005397) #24 Microchiroptera ANCESTRAL SPECIES 3 ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00390000001362 ENSGT00730000111121 Microbat MODERN SPECIES 937 ZNF366 (ENSMLUG00000007392) #7 ENSMLUG00000023203 TNPO1 (ENSMLUG00000016317) #9 FCHO2 (ENSMLUG00000017366) #11 ENSMLUG00000029980 TMEM171 (ENSMLUG00000006615) #12 TMEM174 (ENSMLUG00000015724) #13 ENSMLUG00000006789 ENSMLUG00000012912 ##15 ANKRA2 (ENSMLUG00000008459) #16 UTP15 (ENSMLUG00000008483) #17 ARHGEF28 (ENSMLUG00000004723) #18 ENC1 (ENSMLUG00000004745) #19 HEXB (ENSMLUG00000004748) #20 GFM2 (ENSMLUG00000004761) #21 ENSMLUG00000014464 ##22 FAM169A (ENSMLUG00000014466) #24 GCNT4 (ENSMLUG00000003938) HMGCR (ENSMLUG00000004238) #28 CERT1 (ENSMLUG00000004251) #29 POLK (ENSMLUG00000015681) #30 ANKDD1B (ENSMLUG00000015695) #31 POC5 (ENSMLUG00000015701) #32 SV2C (ENSMLUG00000006658) #35 F2RL2 (ENSMLUG00000006767) #36 IQGAP2 (ENSMLUG00000006695) #37 F2R (ENSMLUG00000029641) ##36 ENSMLUG00000006790 CRHBP (ENSMLUG00000025557) AGGF1 (ENSMLUG00000016792) PDE8B (ENSMLUG00000016798) Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 25 ENSRFEG00010010301 PDZD2 (ENSRFEG00010004632) ENSRFEG00010004613 ENSRFEG00010004606 C5orf22 (ENSRFEG00010004597) DROSHA (ENSRFEG00010004507) CDH6 (ENSRFEG00010004434) CDH9 (ENSRFEG00010004408) CDH10 (ENSRFEG00010004391) ENSRFEG00010004378 CDH12 (ENSRFEG00010004340) CDH18 (ENSRFEG00010004292) BASP1 (ENSRFEG00010004237) ENSRFEG00010004228 MYO10 (ENSRFEG00010004145) ENSRFEG00010004116 ##22 RETREG1 (ENSRFEG00010004080) ZNF622 (ENSRFEG00010004066) MARCHF11 (ENSRFEG00010004055) FBXL7 (ENSRFEG00010004038) ENSRFEG00010004021 ANKH (ENSRFEG00010003994) OTULIN (ENSRFEG00010003972) ENSRFEG00010003959 OTULINL (ENSRFEG00010003944) TRIO (ENSRFEG00010003793) DNAH5 (ENSRFEG00010003650) CTNND2 (ENSRFEG00010003516) DAP (ENSRFEG00010003456) ANKRD33B (ENSRFEG00010003433) ROPN1L (ENSRFEG00010003413) Greater horseshoe bat MODERN SPECIES 25 PTCD2 (ENSRFEG00010020991) ZNF366 (ENSRFEG00010021033) #7 ENSRFEG00010021056 TNPO1 (ENSRFEG00010021068) #9 FCHO2 (ENSRFEG00010021117) #11 TMEM171 (ENSRFEG00010021133) #12 TMEM174 (ENSRFEG00010021149) #13 FOXD1 (ENSRFEG00010010316) ENSRFEG00010010343 #15 ANKRA2 (ENSRFEG00010010517) #16 UTP15 (ENSRFEG00010010574) #17 ARHGEF28 (ENSRFEG00010010905) #18 ENC1 (ENSRFEG00010012008) #19 HEXB (ENSRFEG00010012089) #20 GFM2 (ENSRFEG00010012225) #21 ENSRFEG00010012400 ##22 FAM169A (ENSRFEG00010012573) #24 GCNT4 (ENSRFEG00010012676) ANKRD31 (ENSRFEG00010012703) #27 HMGCR (ENSRFEG00010013017) #28 CERT1 (ENSRFEG00010013140) #29 POLK (ENSRFEG00010013650) #30 ANKDD1B (ENSRFEG00010013842) #31 POC5 (ENSRFEG00010014089) #32 SV2C (ENSRFEG00010014249) #35 IQGAP2 (ENSRFEG00010014371) #37 F2RL2 (ENSRFEG00010015786) #36 F2R (ENSRFEG00010015825) ##36 F2RL1 (ENSRFEG00010015917) ##36 CRHBP (ENSRFEG00010015859) S100Z (ENSRFEG00010015950) Greater horseshoe bat MODERN SPECIES 11 PLCH1 (ENSRFEG00010005294) STRIT1 (ENSRFEG00010005386) MME (ENSRFEG00010005413) GPR149 (ENSRFEG00010005464) DHX36 (ENSRFEG00010005520) ARHGEF26 (ENSRFEG00010005586) RAP2B (ENSRFEG00010005627) P2RY1 (ENSRFEG00010005645) MBNL1 (ENSRFEG00010005839) SUCNR1 (ENSRFEG00010006064) AADAC (ENSRFEG00010006091) ENSRFEG00010006112 ENSRFEG00010006135 ENSRFEG00010006158 AADACL2 (ENSRFEG00010006177) ENSRFEG00010006237 ##22 CXADR (ENSRFEG00010006278) BTG3 (ENSRFEG00010006336) C21orf91 (ENSRFEG00010006369) CHODL (ENSRFEG00010006423) TMPRSS15 (ENSRFEG00010006490) NCAM2 (ENSRFEG00010006860) MRPL39 (ENSRFEG00010007059) JAM2 (ENSRFEG00010007127) ATP5PF (ENSRFEG00010007203) GABPA (ENSRFEG00010007295) APP (ENSRFEG00010007377) CYYR1 (ENSRFEG00010007931) ENSRFEG00010007989 ADAMTS5 (ENSRFEG00010008031) N6AMT1 (ENSRFEG00010008118) Equus ANCESTRAL SPECIES 6 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.a ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Donkey MODERN SPECIES 29 ENSEASG00005025091 TNPO1 (ENSEASG00005018055) #9 FCHO2 (ENSEASG00005025623) #11 TMEM171 (ENSEASG00005018090) #12 TMEM174 (ENSEASG00005018095) #13 ENSEASG00005034410 FOXD1 (ENSEASG00005037265) ENSEASG00005018101 ENSEASG00005018103 ##15 ANKRA2 (ENSEASG00005018107) #16 UTP15 (ENSEASG00005018111) #17 ARHGEF28 (ENSEASG00005018167) #18 ENC1 (ENSEASG00005028078) #19 HEXB (ENSEASG00005018246) #20 GFM2 (ENSEASG00005018285) #21 ENSEASG00005018414 ##22 FAM169A (ENSEASG00005018417) #24 GCNT4 (ENSEASG00005037231) ANKRD31 (ENSEASG00005018424) #27 HMGCR (ENSEASG00005018428) #28 CERT1 (ENSEASG00005018435) #29 POLK (ENSEASG00005018442) #30 ANKDD1B (ENSEASG00005035528) #31 POC5 (ENSEASG00005018452) #32 SV2C (ENSEASG00005018455) #35 F2RL2 (ENSEASG00005036850) #36 IQGAP2 (ENSEASG00005000244) #37 F2R (ENSEASG00005037330) ##36 F2RL1 (ENSEASG00005001812) ##36 S100Z (ENSEASG00005001816) CRHBP (ENSEASG00005001822) Horse MODERN SPECIES 5 ZNF366 (ENSECAG00000006723) #7 H2BL1 (ENSECAG00000037585) TNPO1 (ENSECAG00000024424) #9 FCHO2 (ENSECAG00000023625) #11 TMEM171 (ENSECAG00000023608) #12 TMEM174 (ENSECAG00000023603) #13 BTF3 (ENSECAG00000021629) ##15 ANKRA2 (ENSECAG00000021071) #16 UTP15 (ENSECAG00000019428) #17 ENSECAG00000059104 ARHGEF28 (ENSECAG00000017689) #18 ENSECAG00000048479 ENC1 (ENSECAG00000016706) #19 HEXB (ENSECAG00000011657) #20 GFM2 (ENSECAG00000006640) #21 NSA2 (ENSECAG00000005528) ##22 FAM169A (ENSECAG00000024132) #24 GCNT4 (ENSECAG00000005515) ANKRD31 (ENSECAG00000024123) #27 HMGCR (ENSECAG00000021330) #28 CERT1 (ENSECAG00000017349) #29 POLK (ENSECAG00000014876) #30 ANKDD1B (ENSECAG00000014521) #31 POC5 (ENSECAG00000013824) #32 SV2C (ENSECAG00000010569) #35 F2RL2 (ENSECAG00000010531) #36 IQGAP2 (ENSECAG00000004274) #37 F2RL1 (ENSECAG00000002867) ##36 S100Z (ENSECAG00000000977) F2R (ENSECAG00000004055) ##36 CRHBP (ENSECAG00000017949) Carnivora ANCESTRAL SPECIES 8 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Caniformia ANCESTRAL SPECIES 5 ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00390000001362 ENSGT00730000111121 Canidae ANCESTRAL SPECIES 29 ENSGT00390000009329.a.a ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 Red fox MODERN SPECIES 4 ENSVVUG00000007276 PTCD2 (ENSVVUG00000007299) ENSVVUG00000007333 TNPO1 (ENSVVUG00000007338) #9 FCHO2 (ENSVVUG00000007431) #11 ENSVVUG00000007461 TMEM171 (ENSVVUG00000007463) #12 TMEM174 (ENSVVUG00000007468) #13 BTF3 (ENSVVUG00000007479) #15 ANKRA2 (ENSVVUG00000007498) #16 UTP15 (ENSVVUG00000007505) #17 ARHGEF28 (ENSVVUG00000007570) #18 ENC1 (ENSVVUG00000008459) #19 HEXB (ENSVVUG00000008496) #20 GFM2 (ENSVVUG00000009245) #21 ENSVVUG00000009264 ##22 FAM169A (ENSVVUG00000009283) #24 ENSVVUG00000009334 ENSVVUG00000009336 ENSVVUG00000009349 ENSVVUG00000009366 ENSVVUG00000009426 ENSVVUG00000009431 ENSVVUG00000009476 CHIA (ENSVVUG00000009479) DENND2D (ENSVVUG00000009485) CEPT1 (ENSVVUG00000009489) DRAM2 (ENSVVUG00000009501) Canis_lupus ANCESTRAL SPECIES 6 ENSGT00390000009329.a.a ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT01090000260046.e.b.b.a.b.a.a.b.b.b.b.b.a.a.a.b.a.b ENSGT00510000048902.a #24 ENSGT01090000260006.D.a.a.d.b ENSGT00950000183082.a ENSGT00940000158136 ENSGT00390000014869 ENSGT00940000153577.C ENSGT00950000182872.f.b.a ENSGT00390000001622 ENSGT01020000230389.a.a.b ENSGT00940000154521.B ENSGT00390000004215.a.b.b.c.a ENSGT00390000004554 ENSGT00940000156939 ENSGT00390000004596 Dog DUPLICATION Dog MODERN SPECIES 35 ZNF24 (ENSCAFG00845006889) ZNF396 (ENSCAFG00845006844) INO80C (ENSCAFG00845004846) GALNT1 (ENSCAFG00845004806) C7H18orf21 (ENSCAFG00845004768) RPRD1A (ENSCAFG00845004749) SLC39A6 (ENSCAFG00845004735) ELP2 (ENSCAFG00845004675) MOCOS (ENSCAFG00845004591) MOCOS (ENSCAFG00845004472) ENSCAFG00845004346 ENSCAFG00845004293 KIAA1328 (ENSCAFG00845004276) CELF4 (ENSCAFG00845004209) ENSCAFG00845004110 ENSCAFG00845004036 ##22 PIK3C3 (ENSCAFG00845003885) ENSCAFG00845003839 ENSCAFG00845003817 RIT2 (ENSCAFG00845003778) SYT4 (ENSCAFG00845003717) ENSCAFG00845003645 ENSCAFG00845003617 SETBP1 (ENSCAFG00845003603) ENSCAFG00845003594 ENSCAFG00845003569 SLC14A1 (ENSCAFG00845003486) SIGLEC15 (ENSCAFG00845003447) EPG5 (ENSCAFG00845003404) PSTPIP2 (ENSCAFG00845003305) ATP5F1A (ENSCAFG00845003277) Dog MODERN SPECIES 1 MDH2 (ENSCAFG00845019601) MCHR1 (ENSCAFG00845019660) MRTFA (ENSCAFG00845019751) SGSM3 (ENSCAFG00845020097) ADSL (ENSCAFG00845020328) TNRC6B (ENSCAFG00845020617) ENSCAFG00845020976 FAM83F (ENSCAFG00845021004) GRAP2 (ENSCAFG00845021051) ENSCAFG00845021105 ENTHD1 (ENSCAFG00845021136) CACNA1I (ENSCAFG00845021242) ATF4 (ENSCAFG00845021497) MIEF1 (ENSCAFG00845021530) TAB1 (ENSCAFG00845021610) ENSCAFG00845021674 ##22 SYNGR1 (ENSCAFG00845021779) RPL3 (ENSCAFG00845021864) PDGFB (ENSCAFG00845022039) CBX7 (ENSCAFG00845022140) APOBEC3Z3 (ENSCAFG00845022251) APOBEC3Z1 (ENSCAFG00845022347) APOBEC3Z1 (ENSCAFG00845022387) CBX6 (ENSCAFG00845022457) NPTXR (ENSCAFG00845022551) ENSCAFG00845022648 DNAL4 (ENSCAFG00845022699) SUN2 (ENSCAFG00845022745) GTPBP1 (ENSCAFG00845023003) JOSD1 (ENSCAFG00845023184) TOMM22 (ENSCAFG00845023216) Dog MODERN SPECIES 11 ENSCAFG00845000406 TNPO1 (ENSCAFG00845000423) #9 FCHO2 (ENSCAFG00845000523) #11 TMEM171 (ENSCAFG00845000659) #12 TMEM174 (ENSCAFG00845000674) #13 ENSCAFG00845000688 RPS24 (ENSCAFG00845000696) ENSCAFG00845000702 BTF3 (ENSCAFG00845000717) ##15 ANKRA2 (ENSCAFG00845000743) #16 UTP15 (ENSCAFG00845000802) #17 ARHGEF28 (ENSCAFG00845000901) #18 ENC1 (ENSCAFG00845001141) #19 HEXB (ENSCAFG00845001153) #20 GFM2 (ENSCAFG00845001226) #21 NSA2 (ENSCAFG00845001270) ##22 ENSCAFG00845001288 FAM169A (ENSCAFG00845001306) #24 ENSCAFG00845001362 OR6C6J (ENSCAFG00845001374) ENSCAFG00845001398 GOT2 (ENSCAFG00845001418) SLC38A7 (ENSCAFG00845001448) CNOT1 (ENSCAFG00845001575) SETD6 (ENSCAFG00845001902) NDRG4 (ENSCAFG00845002044) PRSS54 (ENSCAFG00845002196) GINS3 (ENSCAFG00845002220) CCDC113 (ENSCAFG00845002256) CSNK2A2 (ENSCAFG00845002309) CFAP20 (ENSCAFG00845002358) Dingo DUPLICATION Dingo MODERN SPECIES 271 ZNF24 (ENSCAFG00020011643) INO80C (ENSCAFG00020011629) GALNT1 (ENSCAFG00020011625) C18orf21 (ENSCAFG00020011604) RPRD1A (ENSCAFG00020011600) SLC39A6 (ENSCAFG00020011589) ELP2 (ENSCAFG00020011507) MOCOS (ENSCAFG00020011396) FHOD3 (ENSCAFG00020011262) ENSCAFG00020011208 ENSCAFG00020011201 ENSCAFG00020011182 KIAA1328 (ENSCAFG00020011179) ENSCAFG00020011161 ENSCAFG00020011146 ENSCAFG00020011130 ##22 PIK3C3 (ENSCAFG00020011122) ENSCAFG00020011109 RIT2 (ENSCAFG00020011070) SYT4 (ENSCAFG00020011042) ENSCAFG00020011019 SETBP1 (ENSCAFG00020010948) ENSCAFG00020010873 SLC14A1 (ENSCAFG00020010836) SIGLEC15 (ENSCAFG00020010814) EPG5 (ENSCAFG00020010774) PSTPIP2 (ENSCAFG00020010751) ENSCAFG00020010725 HAUS1 (ENSCAFG00020010719) C18orf25 (ENSCAFG00020010717) RNF165 (ENSCAFG00020010709) Dingo MODERN SPECIES 41 ENSCAFG00020019131 TNPO1 (ENSCAFG00020017397) #9 ENSCAFG00020017303 #11 ENSCAFG00020017251 #11 TMEM171 (ENSCAFG00020017246) #12 TMEM174 (ENSCAFG00020017244) #13 ENSCAFG00020017241 ENSCAFG00020017240 ##15 ANKRA2 (ENSCAFG00020017236) #16 UTP15 (ENSCAFG00020017037) #17 ARHGEF28 (ENSCAFG00020017020) #18 ENC1 (ENSCAFG00020017016) #19 HEXB (ENSCAFG00020017013) #20 ENSCAFG00020017010 GFM2 (ENSCAFG00020016998) #21 ENSCAFG00020016993 ##22 ENSCAFG00020016991 FAM169A (ENSCAFG00020016982) #24 ENSCAFG00020016980 ENSCAFG00020016979 ENSCAFG00020016976 ENSCAFG00020016970 GOT2 (ENSCAFG00020016964) SLC38A7 (ENSCAFG00020016917) CNOT1 (ENSCAFG00020010156) SETD6 (ENSCAFG00020010005) ENSCAFG00020009989 ENSCAFG00020009986 PRSS54 (ENSCAFG00020009957) CCDC113 (ENSCAFG00020009951) CSNK2A2 (ENSCAFG00020009302) Caniformia_b ANCESTRAL SPECIES 4 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.a #15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00390000001362 ENSGT00730000111121 Mustelinae ANCESTRAL SPECIES 38 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.n ##22 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618.g #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00390000001362 ENSGT00730000111121 American mink MODERN SPECIES 112 MTX3 (ENSNVIG00000002002) THBS4 (ENSNVIG00000001935) SERINC5 (ENSNVIG00000001875) SPZ1 (ENSNVIG00000001867) ZFYVE16 (ENSNVIG00000001838) F151B (ENSNVIG00000001809) AN34B (ENSNVIG00000001804) ENSNVIG00000001739 MSH3 (ENSNVIG00000000962) ENSNVIG00000000947 RASGRF2 (ENSNVIG00000000915) CKMT2 (ENSNVIG00000000895) ZCCHC9 (ENSNVIG00000000879) ACOT12 (ENSNVIG00000000839) SSBP2 (ENSNVIG00000000485) ENSNVIG00000000465 ##22 ATG10 (ENSNVIG00000000443) ENSNVIG00000000430 RPS23 (ENSNVIG00000000390) Ferret DUPLICATION Ferret MODERN SPECIES 321 ARID1B (ENSMPUG00000005397) ENSMPUG00000005393 TMEM242 (ENSMPUG00000005363) ENSMPUG00000019619 ##22 ZDHHC14 (ENSMPUG00000005351) SNX9 (ENSMPUG00000005333) SYNJ2 (ENSMPUG00000005323) SERAC1 (ENSMPUG00000005304) GTF2H5 (ENSMPUG00000005299) TULP4 (ENSMPUG00000005290) TMEM181 (ENSMPUG00000005207) DYNLT1 (ENSMPUG00000005205) SYTL3 (ENSMPUG00000005195) EZR (ENSMPUG00000005183) RSPH3 (ENSMPUG00000005176) TAGAP (ENSMPUG00000005167) FNDC1 (ENSMPUG00000005104) SOD2 (ENSMPUG00000005045) WTAP (ENSMPUG00000005036) Ferret MODERN SPECIES 286 ENSMPUG00000005973 TMEM171 (ENSMPUG00000005964) #12 TMEM174 (ENSMPUG00000005949) #13 ENSMPUG00000005946 BTF3 (ENSMPUG00000005864) #15 ANKRA2 (ENSMPUG00000005857) #16 UTP15 (ENSMPUG00000005850) #17 ARHGEF28 (ENSMPUG00000005828) #18 ENSMPUG00000018804 ENC1 (ENSMPUG00000018802) #19 HEXB (ENSMPUG00000005816) #20 ENSMPUG00000005795 ##22 FAM169A (ENSMPUG00000005788) #24 GFM2 (ENSMPUG00000005688) #21 GCNT4 (ENSMPUG00000018801) ENSMPUG00000005681 #27 ENSMPUG00000005678 #27 HMGCR (ENSMPUG00000005662) #28 CERT1 (ENSMPUG00000005653) #29 POLK (ENSMPUG00000005641) #30 ANKDD1B (ENSMPUG00000005630) #31 POC5 (ENSMPUG00000005619) #32 SV2C (ENSMPUG00000005606) #35 F2RL2 (ENSMPUG00000005597) #36 IQGAP2 (ENSMPUG00000005569) #37 F2R (ENSMPUG00000005558) ##36 F2RL1 (ENSMPUG00000005551) ##36 Ursidae ANCESTRAL SPECIES 16 ENSGT00390000007246 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a.t #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00950000182967.a.a.a.a.a.a.d ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00390000001362 Giant Panda MODERN SPECIES 13 PTCD2 (ENSAMEG00000007194) ZNF366 (ENSAMEG00000007185) #7 ENSAMEG00000019480 TNPO1 (ENSAMEG00000007147) #9 FCHO2 (ENSAMEG00000007073) #11 TMEM171 (ENSAMEG00000007062) #12 TMEM174 (ENSAMEG00000007057) #13 ENSAMEG00000030457 ENSAMEG00000011563 ##15 ANKRA2 (ENSAMEG00000011538) #16 UTP15 (ENSAMEG00000011501) #17 ARHGEF28 (ENSAMEG00000000401) #18 ENC1 (ENSAMEG00000019026) #19 HEXB (ENSAMEG00000000487) #20 GFM2 (ENSAMEG00000000544) #21 ENSAMEG00000000593 ##22 FAM169A (ENSAMEG00000000608) #24 GCNT4 (ENSAMEG00000029130) ENSAMEG00000000627 #27 ENSAMEG00000030480 HMGCR (ENSAMEG00000000634) #28 CERT1 (ENSAMEG00000000701) #29 POLK (ENSAMEG00000000744) #30 ANKDD1B (ENSAMEG00000000782) #31 POC5 (ENSAMEG00000000800) #32 SV2C (ENSAMEG00000000836) #35 IQGAP2 (ENSAMEG00000001638) #37 F2RL2 (ENSAMEG00000001805) #36 F2R (ENSAMEG00000018602) ##36 F2RL1 (ENSAMEG00000001809) ##36 CRHBP (ENSAMEG00000001817) Ursus ANCESTRAL SPECIES 3 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000154268.e.a.kb ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a.t #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00950000182967.a.a.a.a.a.a.d ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00950000182901.a.a.b.a.b.b ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 American black bear MODERN SPECIES 2923 ENSUAMG00000003608 ENSUAMG00000003601 ##22 FAM169A (ENSUAMG00000003581) #24 Polar bear MODERN SPECIES 173 ZNF366 (ENSUMAG00000007660) #7 ENSUMAG00000007646 TNPO1 (ENSUMAG00000007635) #9 FCHO2 (ENSUMAG00000007628) #11 ENSUMAG00000007619 TMEM171 (ENSUMAG00000007617) #12 TMEM174 (ENSUMAG00000007599) #13 ENSUMAG00000007580 ##15 ANKRA2 (ENSUMAG00000007571) #16 UTP15 (ENSUMAG00000007568) #17 ENSUMAG00000007565 ARHGEF28 (ENSUMAG00000007500) #18 ENC1 (ENSUMAG00000007465) #19 HEXB (ENSUMAG00000007343) #20 GFM2 (ENSUMAG00000007328) #21 ENSUMAG00000007325 ##22 FAM169A (ENSUMAG00000007308) #24 GCNT4 (ENSUMAG00000007290) ENSUMAG00000007284 #27 ENSUMAG00000007271 HMGCR (ENSUMAG00000007258) #28 CERT1 (ENSUMAG00000007238) #29 POLK (ENSUMAG00000007228) #30 ENSUMAG00000007224 ANKDD1B (ENSUMAG00000007210) #31 POC5 (ENSUMAG00000007198) #32 SV2C (ENSUMAG00000007138) #35 F2RL2 (ENSUMAG00000007111) #36 IQGAP2 (ENSUMAG00000005302) #37 F2R (ENSUMAG00000005082) ##36 F2RL1 (ENSUMAG00000005075) ##36 Felidae ANCESTRAL SPECIES 6 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00390000003115.j ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Cat DUPLICATION Cat MODERN SPECIES 240 SLITRK3 (ENSFCAG00000026721) SI (ENSFCAG00000021985) OTOL1 (ENSFCAG00000013815) SPTSSB (ENSFCAG00000013814) NMD3 (ENSFCAG00000022867) PPM1L (ENSFCAG00000030361) ARL14 (ENSFCAG00000004686) KPNA4 (ENSFCAG00000022527) TRIM59 (ENSFCAG00000019137) SMC4 (ENSFCAG00000023964) IFT80 (ENSFCAG00000005307) CC2H3orf80 (ENSFCAG00000042755) ENSFCAG00000047334 IL12A (ENSFCAG00000011130) ENSFCAG00000026679 ENSFCAG00000035937 ##22 ENSFCAG00000007832 MFSD1 (ENSFCAG00000025464) RARRES1 (ENSFCAG00000046780) ENSFCAG00000053294 GFM1 (ENSFCAG00000013291) LXN (ENSFCAG00000013292) MLF1 (ENSFCAG00000022176) RSRC1 (ENSFCAG00000013290) ENSFCAG00000051036 SHOX2 (ENSFCAG00000037357) VEPH1 (ENSFCAG00000015589) PTX3 (ENSFCAG00000003464) ENSFCAG00000047506 CCNL1 (ENSFCAG00000005138) LEKR1 (ENSFCAG00000025717) Cat DUPLICATION Cat MODERN SPECIES PTCD2 (ENSFCAG00000045432) ZNF366 (ENSFCAG00000005456) #7 H2BL1 (ENSFCAG00000030795) ENSFCAG00000047567 TNPO1 (ENSFCAG00000013181) #9 FCHO2 (ENSFCAG00000002158) #11 TMEM171 (ENSFCAG00000002161) #12 TMEM174 (ENSFCAG00000043253) #13 FOXD1 (ENSFCAG00000040483) BTF3 (ENSFCAG00000023973) ##15 ANKRA2 (ENSFCAG00000024372) #16 UTP15 (ENSFCAG00000026085) #17 ARHGEF28 (ENSFCAG00000013540) #18 HEXB (ENSFCAG00000018403) #20 GFM2 (ENSFCAG00000011977) #21 ENSFCAG00000011978 ##22 FAM169A (ENSFCAG00000031781) #24 GCNT4 (ENSFCAG00000010125) ENSFCAG00000029332 #27 HMGCR (ENSFCAG00000000007) #28 CERT1 (ENSFCAG00000031307) #29 POLK (ENSFCAG00000001614) #30 ANKDD1B (ENSFCAG00000009659) #31 POC5 (ENSFCAG00000009661) #32 ENSFCAG00000048312 SV2C (ENSFCAG00000003321) #35 IQGAP2 (ENSFCAG00000003323) #37 F2RL2 (ENSFCAG00000040850) #36 F2R (ENSFCAG00000003325) ##36 S100Z (ENSFCAG00000044986) CRHBP (ENSFCAG00000023090) Cat MODERN SPECIES ATPSCKMT (ENSFCAG00000027158) ENSFCAG00000048844 TAS2R1 (ENSFCAG00000012611) SEMA5A (ENSFCAG00000012608) MTRR (ENSFCAG00000015105) FASTKD3 (ENSFCAG00000015104) CFAP90 (ENSFCAG00000019341) ADCY2 (ENSFCAG00000015101) TENT4A (ENSFCAG00000003474) SRD5A1 (ENSFCAG00000015601) NSUN2 (ENSFCAG00000015602) UBE2QL1 (ENSFCAG00000038630) ENSFCAG00000037684 ICE1 (ENSFCAG00000027435) ADAMTS16 (ENSFCAG00000003777) ENSFCAG00000025379 ##22 IRX1 (ENSFCAG00000036923) ENSFCAG00000044678 IRX2 (ENSFCAG00000040664) IRX4 (ENSFCAG00000022359) NDUFS6 (ENSFCAG00000033856) ENSFCAG00000026326 LPCAT1 (ENSFCAG00000000783) SLC6A3 (ENSFCAG00000002581) CLPTM1L (ENSFCAG00000009544) TERT (ENSFCAG00000009543) SLC6A18 (ENSFCAG00000009542) SLC6A19 (ENSFCAG00000009541) SLC12A7 (ENSFCAG00000009540) NKD2 (ENSFCAG00000029202) TRIP13 (ENSFCAG00000009538) Panthera ANCESTRAL SPECIES 6 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00900000143472 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00390000003115.j ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 Panthera_a ANCESTRAL SPECIES 3 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00900000143472 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00390000003115.j ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 lion DUPLICATION lion MODERN SPECIES 4 KLB (ENSPLOG00000004769) RPL9 (ENSPLOG00000004792) LIAS (ENSPLOG00000004953) UGDH (ENSPLOG00000005243) SMIM14 (ENSPLOG00000005321) ENSPLOG00000005334 UBE2K (ENSPLOG00000005370) PDS5A (ENSPLOG00000005525) N4BP2 (ENSPLOG00000005589) RHOH (ENSPLOG00000005619) CHRNA9 (ENSPLOG00000005632) RBM47 (ENSPLOG00000000470) NSUN7 (ENSPLOG00000000508) APBB2 (ENSPLOG00000000600) UCHL1 (ENSPLOG00000000699) ENSPLOG00000000725 ##22 LIMCH1 (ENSPLOG00000000891) PHOX2B (ENSPLOG00000001168) TMEM33 (ENSPLOG00000001187) SLC30A9 (ENSPLOG00000001228) BEND4 (ENSPLOG00000001275) SHISA3 (ENSPLOG00000001304) ATP8A1 (ENSPLOG00000001399) GRXCR1 (ENSPLOG00000001599) KCTD8 (ENSPLOG00000001607) YIPF7 (ENSPLOG00000001623) GUF1 (ENSPLOG00000001646) GNPDA2 (ENSPLOG00000001689) ENSPLOG00000001717 GABRG1 (ENSPLOG00000001738) GABRA2 (ENSPLOG00000001768) lion MODERN SPECIES 9 BCHE (ENSPLOG00000016906) SLITRK3 (ENSPLOG00000016878) SI (ENSPLOG00000016507) OTOL1 (ENSPLOG00000016242) SPTSSB (ENSPLOG00000016221) NMD3 (ENSPLOG00000016166) B3GALNT1 (ENSPLOG00000016099) PPM1L (ENSPLOG00000015949) ARL14 (ENSPLOG00000015928) KPNA4 (ENSPLOG00000015881) TRIM59 (ENSPLOG00000015800) SMC4 (ENSPLOG00000015518) C3orf80 (ENSPLOG00000015469) ENSPLOG00000015446 IL12A (ENSPLOG00000015377) ENSPLOG00000015276 ##22 ENSPLOG00000014648 IQCJ (ENSPLOG00000014473) ENSPLOG00000014403 MFSD1 (ENSPLOG00000014116) RARRES1 (ENSPLOG00000014023) LXN (ENSPLOG00000013849) GFM1 (ENSPLOG00000013707) MLF1 (ENSPLOG00000013649) ENSPLOG00000013628 RSRC1 (ENSPLOG00000013528) SHOX2 (ENSPLOG00000013339) PTX3 (ENSPLOG00000013109) VEPH1 (ENSPLOG00000012921) CCNL1 (ENSPLOG00000012698) LEKR1 (ENSPLOG00000012490) lion MODERN SPECIES ZNF366 (ENSPLOG00000003554) #7 ENSPLOG00000003540 TNPO1 (ENSPLOG00000003467) #9 ENSPLOG00000003418 FCHO2 (ENSPLOG00000003353) #11 TMEM171 (ENSPLOG00000003289) #12 TMEM174 (ENSPLOG00000003276) #13 FOXD1 (ENSPLOG00000003268) ENSPLOG00000003249 ##15 ANKRA2 (ENSPLOG00000003224) #16 UTP15 (ENSPLOG00000003135) #17 ARHGEF28 (ENSPLOG00000002846) #18 ENC1 (ENSPLOG00000002654) #19 HEXB (ENSPLOG00000002627) #20 GFM2 (ENSPLOG00000002587) #21 ENSPLOG00000002554 ##22 ENSPLOG00000002537 FAM169A (ENSPLOG00000002487) #24 ENSPLOG00000002461 GCNT4 (ENSPLOG00000002455) ENSPLOG00000002438 #27 ENSPLOG00000002411 HMGCR (ENSPLOG00000002361) #28 CERT1 (ENSPLOG00000002211) #29 POLK (ENSPLOG00000002076) #30 ANKDD1B (ENSPLOG00000002011) #31 POC5 (ENSPLOG00000001946) #32 ENSPLOG00000001913 SV2C (ENSPLOG00000001869) #35 F2RL2 (ENSPLOG00000001850) #36 IQGAP2 (ENSPLOG00000001777) #37 leopard DUPLICATION leopard MODERN SPECIES 5 SLITRK3 (ENSPPRG00000021687) SI (ENSPPRG00000021215) ENSPPRG00000023810 OTOL1 (ENSPPRG00000023542) SPTSSB (ENSPPRG00000021831) NMD3 (ENSPPRG00000000724) PPM1L (ENSPPRG00000002458) ARL14 (ENSPPRG00000021892) KPNA4 (ENSPPRG00000003061) TRIM59 (ENSPPRG00000003467) SMC4 (ENSPPRG00000004256) IFT80 (ENSPPRG00000005142) C3orf80 (ENSPPRG00000021909) ENSPPRG00000005383 IL12A (ENSPPRG00000005897) ENSPPRG00000006249 ##22 ENSPPRG00000007336 IQCJ (ENSPPRG00000007765) MFSD1 (ENSPPRG00000008502) RARRES1 (ENSPPRG00000008712) LXN (ENSPPRG00000008785) GFM1 (ENSPPRG00000009281) MLF1 (ENSPPRG00000010057) ENSPPRG00000010610 RSRC1 (ENSPPRG00000012590) SHOX2 (ENSPPRG00000012987) ENSPPRG00000013159 PTX3 (ENSPPRG00000013280) VEPH1 (ENSPPRG00000014553) CCNL1 (ENSPPRG00000015223) LEKR1 (ENSPPRG00000016442) leopard MODERN SPECIES 40 ENSPPRG00000016546 ZNF366 (ENSPPRG00000017602) #7 ENSPPRG00000015830 TNPO1 (ENSPPRG00000022336) #9 FCHO2 (ENSPPRG00000000983) #11 TMEM171 (ENSPPRG00000001762) #12 TMEM174 (ENSPPRG00000002055) #13 FOXD1 (ENSPPRG00000015999) ENSPPRG00000002597 #15 ANKRA2 (ENSPPRG00000003108) #16 UTP15 (ENSPPRG00000003745) #17 ARHGEF28 (ENSPPRG00000014231) #18 ENC1 (ENSPPRG00000016411) #19 HEXB (ENSPPRG00000016405) #20 GFM2 (ENSPPRG00000002671) #21 ENSPPRG00000003110 ##22 ENSPPRG00000004205 FAM169A (ENSPPRG00000005349) #24 GCNT4 (ENSPPRG00000017075) ENSPPRG00000006600 #27 HMGCR (ENSPPRG00000008332) #28 CERT1 (ENSPPRG00000009941) #29 POLK (ENSPPRG00000012504) #30 ANKDD1B (ENSPPRG00000013528) #31 POC5 (ENSPPRG00000017915) #32 ENSPPRG00000021813 SV2C (ENSPPRG00000024498) #35 F2RL2 (ENSPPRG00000024088) #36 IQGAP2 (ENSPPRG00000001278) #37 F2R (ENSPPRG00000001748) ##36 F2RL1 (ENSPPRG00000001778) ##36 Tiger DUPLICATION Tiger MODERN SPECIES 242 ENSPTIG00000009867 SLITRK3 (ENSPTIG00000007056) SI (ENSPTIG00000010753) OTOL1 (ENSPTIG00000015325) SPTSSB (ENSPTIG00000007176) ENSPTIG00000007184 NMD3 (ENSPTIG00000016761) PPM1L (ENSPTIG00000020113) ARL14 (ENSPTIG00000007233) KPNA4 (ENSPTIG00000021494) SMC4 (ENSPTIG00000009501) IFT80 (ENSPTIG00000017853) IL12A (ENSPTIG00000019184) SCHIP1 (ENSPTIG00000021584) ENSPTIG00000021983 ##22 IQCJ (ENSPTIG00000000535) MFSD1 (ENSPTIG00000004131) RARRES1 (ENSPTIG00000012044) GFM1 (ENSPTIG00000012416) LXN (ENSPTIG00000013811) MLF1 (ENSPTIG00000014178) RSRC1 (ENSPTIG00000017358) SHOX2 (ENSPTIG00000002610) ENSPTIG00000007545 VEPH1 (ENSPTIG00000007873) PTX3 (ENSPTIG00000011127) CCNL1 (ENSPTIG00000011507) LEKR1 (ENSPTIG00000013039) TIPARP (ENSPTIG00000014258) SSR3 (ENSPTIG00000016314) Tiger MODERN SPECIES 134 MRPS27 (ENSPTIG00000020435) ENSPTIG00000020146 ZNF366 (ENSPTIG00000019921) #7 ENSPTIG00000005718 TNPO1 (ENSPTIG00000018839) #9 FCHO2 (ENSPTIG00000016921) #11 TMEM171 (ENSPTIG00000016423) #12 TMEM174 (ENSPTIG00000016234) #13 ENSPTIG00000016139 ##15 ANKRA2 (ENSPTIG00000015943) #16 UTP15 (ENSPTIG00000014484) #17 ARHGEF28 (ENSPTIG00000008258) #18 ENC1 (ENSPTIG00000005574) #19 HEXB (ENSPTIG00000006120) #20 GFM2 (ENSPTIG00000021698) #21 ENSPTIG00000021404 ##22 ENSPTIG00000005537 FAM169A (ENSPTIG00000020456) #24 GCNT4 (ENSPTIG00000005529) ENSPTIG00000019989 #27 HMGCR (ENSPTIG00000018612) #28 CERT1 (ENSPTIG00000016589) #29 POLK (ENSPTIG00000014864) #30 ANKDD1B (ENSPTIG00000013441) #31 POC5 (ENSPTIG00000011856) #32 SV2C (ENSPTIG00000010098) #35 F2RL2 (ENSPTIG00000009666) #36 IQGAP2 (ENSPTIG00000021975) #37 F2R (ENSPTIG00000021894) ##36 F2RL1 (ENSPTIG00000021859) ##36 S100Z (ENSPTIG00000021832) Artiodactyla ANCESTRAL SPECIES 8 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Artiodactyla_a ANCESTRAL SPECIES 7 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Pecora ANCESTRAL SPECIES 25 ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.a.d ##15 ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 ENSGT00390000014412 ENSGT00390000007125.b ENSGT00940000156866.db.a ENSGT00390000014165.c.b ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a Percora_a ANCESTRAL SPECIES 26 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.a.d ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 ENSGT00390000014412 ENSGT00390000007125.b ENSGT00940000156866.db.a ENSGT00390000014165.c.b ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a Siberian musk deer MODERN SPECIES 182 ENSMMSG00000014876 TNPO1 (ENSMMSG00000014901) #9 FCHO2 (ENSMMSG00000014984) #11 ENSMMSG00000015028 TMEM171 (ENSMMSG00000015047) #12 TMEM174 (ENSMMSG00000015062) #13 ENSMMSG00000015081 ##15 ENSMMSG00000015103 #16 UTP15 (ENSMMSG00000015177) #17 ENSMMSG00000015240 ARHGEF28 (ENSMMSG00000015336) #18 ENSMMSG00000015814 ENC1 (ENSMMSG00000015823) #19 ENSMMSG00000015830 #20 GFM2 (ENSMMSG00000015843) #21 ENSMMSG00000015871 ##22 FAM169A (ENSMMSG00000015906) #24 ENSMMSG00000015984 NSG2 (ENSMMSG00000016007) CPEB4 (ENSMMSG00000016141) ENSMMSG00000016319 ENSMMSG00000016344 STC2 (ENSMMSG00000016387) NKX2-5 (ENSMMSG00000016422) BNIP1 (ENSMMSG00000016447) CREBRF (ENSMMSG00000016494) ENSMMSG00000016537 RPL26L1 (ENSMMSG00000016583) ERGIC1 (ENSMMSG00000016601) DUSP1 (ENSMMSG00000016631) NEURL1B (ENSMMSG00000016666) Bovidae ANCESTRAL SPECIES 26 ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.a.d ##15 ENSGT00510000046986.x.a.c ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 ENSGT00390000014412 ENSGT00390000007125.b ENSGT00940000156866.db.a ENSGT00390000014165.c.b ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a Caprinae ANCESTRAL SPECIES 24 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.a.d.i ##15 ENSGT00510000046986.x.a.c ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a.o #20 ENSGT00390000008107.c.a.p #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000157760.e ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 ENSGT00390000014412 ENSGT00390000007125.b ENSGT00940000156866.db.a ENSGT00390000014165.c.b ENSGT00530000063113.C ENSGT00940000159044 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 7 PTCD2 (ENSOARG00020023141) ZNF366 (ENSOARG00020023121) #7 ENSOARG00020023105 TNPO1 (ENSOARG00020022995) #9 FCHO2 (ENSOARG00020022565) #11 TMEM171 (ENSOARG00020022511) #12 TMEM174 (ENSOARG00020022498) #13 ENSOARG00020022447 ##15 ENSOARG00020022440 ANKRA2 (ENSOARG00020022387) #16 UTP15 (ENSOARG00020022284) #17 ARHGEF28 (ENSOARG00020021605) #18 ENC1 (ENSOARG00020021534) #19 ENSOARG00020021358 #20 GFM2 (ENSOARG00020021066) #21 ENSOARG00020020990 ##22 FAM169A (ENSOARG00020020874) #24 MSX2 (ENSOARG00020020841) ENSOARG00020020789 NSG2 (ENSOARG00020020679) C5orf47 (ENSOARG00020020601) CPEB4 (ENSOARG00020019809) ENSOARG00020019684 STC2 (ENSOARG00020019635) NKX2-5 (ENSOARG00020019608) BNIP1 (ENSOARG00020019520) CREBRF (ENSOARG00020019431) ATP6V0E1 (ENSOARG00020019362) RPL26L1 (ENSOARG00020019301) ERGIC1 (ENSOARG00020019165) DUSP1 (ENSOARG00020019107) Rambouillet Sheep MODERN SPECIES 2 RECQL5 (ENSOARG00020009478) SMIM5 (ENSOARG00020009636) SAP30BP (ENSOARG00020009689) ITGB4 (ENSOARG00020009797) GALK1 (ENSOARG00020010209) H3F3A (ENSOARG00020010273) UNK (ENSOARG00020010345) UNC13D (ENSOARG00020010518) WBP2 (ENSOARG00020010630) TRIM47 (ENSOARG00020010837) FBF1 (ENSOARG00020010978) TRIM65 (ENSOARG00020011145) MRPL38 (ENSOARG00020011228) ACOX1 (ENSOARG00020011301) TEN1 (ENSOARG00020011418) ENSOARG00020011444 ##22 CDK3 (ENSOARG00020011491) ENSOARG00020011593 SRP68 (ENSOARG00020011952) GALR2 (ENSOARG00020012118) ZACN (ENSOARG00020012158) EXOC7 (ENSOARG00020012286) FOXJ1 (ENSOARG00020012852) RNF157 (ENSOARG00020012903) UBALD2 (ENSOARG00020013421) QRICH2 (ENSOARG00020013629) PRPSAP1 (ENSOARG00020014503) ENSOARG00020014595 UBE2O (ENSOARG00020014730) AANAT (ENSOARG00020014913) ENSOARG00020015002 Goat DUPLICATION Goat MODERN SPECIES 10 ENSCHIG00000026451 SMIM5 (ENSCHIG00000025984) RECQL5 (ENSCHIG00000009742) SAP30BP (ENSCHIG00000021087) ITGB4 (ENSCHIG00000005571) GALK1 (ENSCHIG00000004957) ENSCHIG00000023303 UNK (ENSCHIG00000015385) UNC13D (ENSCHIG00000023322) WBP2 (ENSCHIG00000025622) TRIM47 (ENSCHIG00000016592) TRIM65 (ENSCHIG00000022135) MRPL38 (ENSCHIG00000016277) FBF1 (ENSCHIG00000023306) ACOX1 (ENSCHIG00000021549) ENSCHIG00000014913 ##22 TEN1 (ENSCHIG00000009483) CDK3 (ENSCHIG00000019794) ENSCHIG00000026103 SRP68 (ENSCHIG00000009842) GALR2 (ENSCHIG00000017151) EXOC7 (ENSCHIG00000010786) FOXJ1 (ENSCHIG00000010816) ENSCHIG00000027145 ENSCHIG00000015850 RNF157 (ENSCHIG00000026615) UBALD2 (ENSCHIG00000021155) ENSCHIG00000022043 PRPSAP1 (ENSCHIG00000026531) SPHK1 (ENSCHIG00000021681) UBE2O (ENSCHIG00000025255) Goat MODERN SPECIES 12 FCHO2 (ENSCHIG00000012241) #11 TMEM171 (ENSCHIG00000021608) #12 TMEM174 (ENSCHIG00000015643) #13 FOXD1 (ENSCHIG00000002299) ENSCHIG00000020581 ##15 ENSCHIG00000015443 ANKRA2 (ENSCHIG00000021257) #16 UTP15 (ENSCHIG00000016936) #17 ENSCHIG00000012836 ENSCHIG00000017029 ARHGEF28 (ENSCHIG00000013942) #18 ENC1 (ENSCHIG00000019428) #19 ENSCHIG00000008375 #20 ENSCHIG00000020660 #20 GFM2 (ENSCHIG00000012765) #21 ENSCHIG00000005844 ##22 FAM169A (ENSCHIG00000019541) #24 ENSCHIG00000023343 ENSCHIG00000013293 NSG2 (ENSCHIG00000005307) C5orf47 (ENSCHIG00000015963) CPEB4 (ENSCHIG00000011030) ENSCHIG00000014604 ENSCHIG00000021511 STC2 (ENSCHIG00000005361) NKX2-5 (ENSCHIG00000017420) BNIP1 (ENSCHIG00000007910) CREBRF (ENSCHIG00000011720) ENSCHIG00000023731 RPL26L1 (ENSCHIG00000015371) ERGIC1 (ENSCHIG00000000491) Bovinae ANCESTRAL SPECIES 25 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a.r #20 ENSGT00390000008107.c.a.q #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159824 ENSGT00940000154911.l ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00420000029792.d ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 ENSGT00390000014412 ENSGT00390000007125.b ENSGT00940000156866.db.a ENSGT00390000014165.c.b ENSGT00530000063113.C American bison DUPLICATION American bison MODERN SPECIES 3186 FKBP5 (ENSBBBG00000013674) TULP1 (ENSBBBG00000007695) ENSBBBG00000001536 TEAD3 (ENSBBBG00000013702) RPL10A (ENSBBBG00000013708) FANCE (ENSBBBG00000013719) PPARD (ENSBBBG00000013721) DEF6 (ENSBBBG00000001527) ZNF76 (ENSBBBG00000002940) SCUBE3 (ENSBBBG00000013778) TCP11 (ENSBBBG00000013808) ANKS1A (ENSBBBG00000013865) TAF11 (ENSBBBG00000013897) BLTP3A (ENSBBBG00000013943) ENSBBBG00000013957 ENSBBBG00000013963 ##22 ILRUN (ENSBBBG00000003059) SPDEF (ENSBBBG00000013970) PACSIN1 (ENSBBBG00000013990) RPS10 (ENSBBBG00000003090) ENSBBBG00000007549 NUDT3 (ENSBBBG00000014010) SMIM29 (ENSBBBG00000003105) HMGA1 (ENSBBBG00000003112) GRM4 (ENSBBBG00000014072) ENSBBBG00000014085 ENSBBBG00000014096 IP6K3 (ENSBBBG00000014104) UQCC2 (ENSBBBG00000014109) ITPR3 (ENSBBBG00000014413) ENSBBBG00000014460 American bison MODERN SPECIES 3243 ENSBBBG00000003091 TNPO1 (ENSBBBG00000003141) #9 FCHO2 (ENSBBBG00000014125) #11 TMEM171 (ENSBBBG00000003184) #12 TMEM174 (ENSBBBG00000007406) #13 ENSBBBG00000003191 ENSBBBG00000014147 ##15 ENSBBBG00000014149 ANKRA2 (ENSBBBG00000003201) #16 UTP15 (ENSBBBG00000014173) #17 ARHGEF28 (ENSBBBG00000014341) #18 ENC1 (ENSBBBG00000014360) #19 ENSBBBG00000014401 #20 ENSBBBG00000014412 #20 GFM2 (ENSBBBG00000014490) #21 ENSBBBG00000014517 ##22 FAM169A (ENSBBBG00000014545) #24 MSX2 (ENSBBBG00000003408) ENSBBBG00000014557 NSG2 (ENSBBBG00000009125) C5orf47 (ENSBBBG00000008910) ENSBBBG00000002871 CPEB4 (ENSBBBG00000014656) ENSBBBG00000014675 Bos ANCESTRAL SPECIES 26 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT01100000267062 ENSGT00940000162930 ENSGT01100000264231.B ENSGT00940000153288.a.a.d ##15 ENSGT00510000046986.x.a.c ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a.r #20 ENSGT00390000008107.c.a.q #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159824 ENSGT00940000154911.l ENSGT00390000000483.a.a ENSGT00940000168505 ENSGT00940000154998.a.a ENSGT00420000029792.d ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 ENSGT00390000014412 ENSGT00390000007125.b ENSGT00940000156866.db.a ENSGT00390000014165.c.b ENSGT00530000063113.C Bos_b ANCESTRAL SPECIES 29 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT01100000267062 ENSGT00940000162930 ENSGT01100000264231.B ENSGT00940000153288.a.a.d ##15 ENSGT00510000046986.x.a.c ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a.r #20 ENSGT00390000008107.c.a.q #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159824 ENSGT00940000154911.l ENSGT00390000000483.a.a ENSGT00940000168505 ENSGT00940000154998.a.a ENSGT00420000029792.d ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 ENSGT00390000014412 ENSGT00390000007125.b ENSGT00940000156866.db.a ENSGT00390000014165.d ENSGT00530000063113.C Hybrid Bos Indicus MODERN SPECIES 12 TMEM171 (ENSBIXG00005007563) #12 TMEM174 (ENSBIXG00005017904) #13 FOXD1 (ENSBIXG00005017926) ENSBIXG00005002917 ENSBIXG00005018010 ##15 ENSBIXG00005018020 ANKRA2 (ENSBIXG00005018033) #16 UTP15 (ENSBIXG00005018086) #17 ENSBIXG00005018101 ARHGEF28 (ENSBIXG00005018234) #18 ENC1 (ENSBIXG00005002964) #19 ENSBIXG00005018309 ENSBIXG00005018408 #20 ENSBIXG00005002985 #20 GFM2 (ENSBIXG00005002998) #21 ENSBIXG00005018592 ##22 FAM169A (ENSBIXG00005018635) #24 MSX2 (ENSBIXG00005018660) ENSBIXG00005003031 ENSBIXG00005018701 NSG2 (ENSBIXG00005018735) ENSBIXG00005018775 CPEB4 (ENSBIXG00005018897) ENSBIXG00005018925 STC2 (ENSBIXG00005018970) NKX2-5 (ENSBIXG00005018998) BNIP1 (ENSBIXG00005019018) CREBRF (ENSBIXG00005002650) ENSBIXG00005019047 ENSBIXG00005005519 ENSBIXG00005019189 Cow MODERN SPECIES 12 ENSBTAG00000053703 #11 TMEM171 (ENSBTAG00000008494) #12 TMEM174 (ENSBTAG00000003377) #13 ENSBTAG00000049168 CALM (ENSBTAG00000032705) ENSBTAG00000052818 BTF3 (ENSBTAG00000010012) ##15 ENSBTAG00000053489 ANKRA2 (ENSBTAG00000018452) #16 UTP15 (ENSBTAG00000006843) #17 ARHGEF28 (ENSBTAG00000005633) #18 ENC1 (ENSBTAG00000026369) #19 ENSBTAG00000034138 #20 HEXB (ENSBTAG00000015512) #20 GFM2 (ENSBTAG00000015519) #21 NSA2 (ENSBTAG00000003066) ##22 FAM169A (ENSBTAG00000016002) #24 MSX2 (ENSBTAG00000013873) ENSBTAG00000048786 NSG2 (ENSBTAG00000000564) C20H5orf47 (ENSBTAG00000054459) CPEB4 (ENSBTAG00000009995) BOD1 (ENSBTAG00000034598) STC2 (ENSBTAG00000001823) NKX2-5 (ENSBTAG00000020568) BNIP1 (ENSBTAG00000002021) CREBRF (ENSBTAG00000002020) ATP6V0E1 (ENSBTAG00000015100) RPL26L1 (ENSBTAG00000015099) ERGIC1 (ENSBTAG00000015955) DUSP1 (ENSBTAG00000013863) Bos_a ANCESTRAL SPECIES 74 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a.r #20 ENSGT00390000008107.c.a.q #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00420000029792.d ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 ENSGT00390000014412 ENSGT00390000007125.b ENSGT00940000156866.db.a ENSGT00390000014165.c.b ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a Wild yak MODERN SPECIES 1127 ENC1 (ENSBMUG00000018790) #19 ENSBMUG00000018779 #20 ENSBMUG00000018337 #20 GFM2 (ENSBMUG00000018109) #21 ENSBMUG00000018033 ##22 FAM169A (ENSBMUG00000017996) #24 MSX2 (ENSBMUG00000017970) ENSBMUG00000017952 ENSBMUG00000017938 NSG2 (ENSBMUG00000017915) ENSBMUG00000017901 CPEB4 (ENSBMUG00000017818) ENSBMUG00000017636 STC2 (ENSBMUG00000017613) NKX2-5 (ENSBMUG00000017585) BNIP1 (ENSBMUG00000017555) CREBRF (ENSBMUG00000017514) ENSBMUG00000017490 RPL26L1 (ENSBMUG00000017477) ERGIC1 (ENSBMUG00000017458) Domestic yak MODERN SPECIES 15 GFM2 (ENSBGRG00000012114) #21 ENSBGRG00000012164 ENSBGRG00000012194 ##22 FAM169A (ENSBGRG00000012377) #24 MSX2 (ENSBGRG00000012586) NSG2 (ENSBGRG00000012654) CPEB4 (ENSBGRG00000012907) ENSBGRG00000013541 ENSBGRG00000013569 ENSBGRG00000013644 STC2 (ENSBGRG00000013735) NKX2-5 (ENSBGRG00000013796) BNIP1 (ENSBGRG00000013853) CREBRF (ENSBGRG00000014123) ENSBGRG00000014274 ENSBGRG00000014439 ERGIC1 (ENSBGRG00000014556) DUSP1 (ENSBGRG00000015028) Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 10 APOD (ENSCHYG00000011293) ENSCHYG00000011331 ACAP2 (ENSCHYG00000011412) XXYLT1 (ENSCHYG00000011678) ENSCHYG00000011741 FAM43A (ENSCHYG00000011750) LSG1 (ENSCHYG00000011784) TMEM44 (ENSCHYG00000011891) ATP13A3 (ENSCHYG00000012061) GP5 (ENSCHYG00000012706) ENSCHYG00000012738 LRRC15 (ENSCHYG00000012762) CPN2 (ENSCHYG00000012772) ENSCHYG00000012812 OPA1 (ENSCHYG00000013079) ENSCHYG00000014541 ##22 ATP13A4 (ENSCHYG00000014600) ATP13A5 (ENSCHYG00000014857) PLAAT1 (ENSCHYG00000015170) MB21D2 (ENSCHYG00000015341) ENSCHYG00000015377 FGF12 (ENSCHYG00000015431) ENSCHYG00000015730 CCDC50 (ENSCHYG00000015774) UTS2B (ENSCHYG00000015889) OSTN (ENSCHYG00000015998) GMNC (ENSCHYG00000016158) IL1RAP (ENSCHYG00000016282) TMEM207 (ENSCHYG00000016540) CLDN16 (ENSCHYG00000016587) CLDN1 (ENSCHYG00000016635) Yarkand deer MODERN SPECIES 17 ENSCHYG00000024209 #9 ENSCHYG00000023785 #11 ENSCHYG00000023735 #12 ENSCHYG00000023715 #13 ENSCHYG00000023700 ENSCHYG00000023638 ##15 ENSCHYG00000023591 #16 ENSCHYG00000023480 #17 ENSCHYG00000022585 #18 ENSCHYG00000022494 #19 ENSCHYG00000022377 #20 ENSCHYG00000022361 #19 ENSCHYG00000022316 #20 ENSCHYG00000022222 #20 GFM2 (ENSCHYG00000022008) #21 ENSCHYG00000021907 ##22 FAM169A (ENSCHYG00000021764) #24 MSX2 (ENSCHYG00000021730) NSG2 (ENSCHYG00000021633) C5orf47 (ENSCHYG00000021506) CPEB4 (ENSCHYG00000020990) ENSCHYG00000020876 STC2 (ENSCHYG00000020794) NKX2-5 (ENSCHYG00000020766) BNIP1 (ENSCHYG00000020650) CREBRF (ENSCHYG00000020340) ENSCHYG00000020276 ENSCHYG00000019954 DUSP1 (ENSCHYG00000019886) NEURL1B (ENSCHYG00000019690) SH3PXD2B (ENSCHYG00000019576) Cetacea ANCESTRAL SPECIES 1 ENSGT00390000007246 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT00940000155389.o #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00530000063000.a.a.a.f ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Blue whale MODERN SPECIES 14 PTCD2 (ENSBMSG00010004295) ZNF366 (ENSBMSG00010004343) #7 ENSBMSG00010004357 #9 FCHO2 (ENSBMSG00010004388) #11 TMEM171 (ENSBMSG00010004430) #12 ENSBMSG00010004443 TMEM174 (ENSBMSG00010004452) #13 FOXD1 (ENSBMSG00010004462) ENSBMSG00010004469 ##15 ANKRA2 (ENSBMSG00010004475) #16 UTP15 (ENSBMSG00010004487) #17 ARHGEF28 (ENSBMSG00010004561) #18 ENC1 (ENSBMSG00010004655) #19 HEXB (ENSBMSG00010004665) #20 GFM2 (ENSBMSG00010004689) #21 ENSBMSG00010004702 ##22 ENSBMSG00010004714 #24 ENSBMSG00010004732 GCNT4 (ENSBMSG00010004754) ANKRD31 (ENSBMSG00010004774) #27 HMGCR (ENSBMSG00010004832) #28 CERT1 (ENSBMSG00010004912) #29 POLK (ENSBMSG00010005438) #30 POC5 (ENSBMSG00010005501) #32 SV2C (ENSBMSG00010005531) #35 ENSBMSG00010005549 IQGAP2 (ENSBMSG00010005591) #37 F2RL2 (ENSBMSG00010005686) #36 F2R (ENSBMSG00010005694) ##36 F2RL1 (ENSBMSG00010005699) ##36 S100Z (ENSBMSG00010005711) Odontoceti ANCESTRAL SPECIES 1 ENSGT00390000007246 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT00940000155389.o #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00530000063000.a.a.a.f ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00940000155498 #7 ENSGT00940000155389.o #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831.l #18 ENSGT00940000155831.k #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00390000007246 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT00940000155389.o #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831.l #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00940000154586.g.b ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Monodontidae ANCESTRAL SPECIES 7 ENSGT00390000007246 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT00940000155389.o #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831.l #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00940000154586.g.b ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Narwhal DUPLICATION Narwhal MODERN SPECIES 298 MRPS27 (ENSMMNG00015006337) PTCD2 (ENSMMNG00015006379) ZNF366 (ENSMMNG00015006413) #7 ENSMMNG00015006462 #9 FCHO2 (ENSMMNG00015006516) #11 TMEM171 (ENSMMNG00015006565) #12 TMEM174 (ENSMMNG00015006578) #13 FOXD1 (ENSMMNG00015006586) ENSMMNG00015006605 ##15 ANKRA2 (ENSMMNG00015006632) #16 UTP15 (ENSMMNG00015006668) #17 ARHGEF28 (ENSMMNG00015006721) #18 ENC1 (ENSMMNG00015006752) #19 HEXB (ENSMMNG00015006771) #20 GFM2 (ENSMMNG00015006841) #21 ENSMMNG00015006875 ##22 FAM169A (ENSMMNG00015006911) #24 GCNT4 (ENSMMNG00015006954) ANKRD31 (ENSMMNG00015007010) #27 HMGCR (ENSMMNG00015007107) #28 CERT1 (ENSMMNG00015007218) #29 POLK (ENSMMNG00015007374) #30 ANKDD1B (ENSMMNG00015007467) #31 POC5 (ENSMMNG00015007540) #32 SV2C (ENSMMNG00015007600) #35 ENSMMNG00015007640 IQGAP2 (ENSMMNG00015007731) #37 F2RL2 (ENSMMNG00015007923) #36 F2R (ENSMMNG00015007933) ##36 F2RL1 (ENSMMNG00015007943) ##36 S100Z (ENSMMNG00015007958) Narwhal MODERN SPECIES 297 ENSMMNG00015001033 IL12A (ENSMMNG00015000911) ENSMMNG00015000856 C3orf80 (ENSMMNG00015000836) IFT80 (ENSMMNG00015000800) SMC4 (ENSMMNG00015000670) TRIM59 (ENSMMNG00015000625) KPNA4 (ENSMMNG00015000482) ARL14 (ENSMMNG00015000427) ENSMMNG00015000409 PPM1L (ENSMMNG00015000367) ENSMMNG00015000327 ENSMMNG00015000317 NMD3 (ENSMMNG00015000263) OTOL1 (ENSMMNG00015000204) ENSMMNG00015000192 ##22 SI (ENSMMNG00015000088) SLITRK3 (ENSMMNG00015004010) BCHE (ENSMMNG00015003992) ENSMMNG00015003982 ZBBX (ENSMMNG00015003954) SERPINI2 (ENSMMNG00015003914) ENSMMNG00015003880 PDCD10 (ENSMMNG00015003838) SERPINI1 (ENSMMNG00015003804) GOLIM4 (ENSMMNG00015003751) ENSMMNG00015003725 MECOM (ENSMMNG00015003632) ACTRT3 (ENSMMNG00015003568) MYNN (ENSMMNG00015003537) LRRC34 (ENSMMNG00015003444) Beluga whale MODERN SPECIES 71 MRPS27 (ENSDLEG00000010646) PTCD2 (ENSDLEG00000010606) ZNF366 (ENSDLEG00000010589) #7 TNPO1 (ENSDLEG00000010212) #9 FCHO2 (ENSDLEG00000010105) #11 TMEM171 (ENSDLEG00000010086) #12 TMEM174 (ENSDLEG00000010071) #13 FOXD1 (ENSDLEG00000010050) BTF3 (ENSDLEG00000010028) #15 ANKRA2 (ENSDLEG00000009969) #16 UTP15 (ENSDLEG00000009898) #17 ARHGEF28 (ENSDLEG00000009420) #18 ENC1 (ENSDLEG00000009379) #19 HEXB (ENSDLEG00000009012) #20 GFM2 (ENSDLEG00000008794) #21 NSA2 (ENSDLEG00000008766) ##22 FAM169A (ENSDLEG00000008731) #24 GCNT4 (ENSDLEG00000008712) ANKRD31 (ENSDLEG00000008542) #27 HMGCR (ENSDLEG00000008447) #28 COL4A3BP (ENSDLEG00000008328) #29 POLK (ENSDLEG00000008261) #30 POC5 (ENSDLEG00000008196) #32 ENSDLEG00000008154 SV2C (ENSDLEG00000008107) #35 ENSDLEG00000008092 F2RL2 (ENSDLEG00000008080) #36 IQGAP2 (ENSDLEG00000008039) #37 F2R (ENSDLEG00000008028) ##36 F2RL1 (ENSDLEG00000008016) ##36 S100Z (ENSDLEG00000008008) Vaquita MODERN SPECIES 14 MRPS27 (ENSPSNG00000007388) PTCD2 (ENSPSNG00000007260) ZNF366 (ENSPSNG00000007207) #7 ENSPSNG00000007143 #9 FCHO2 (ENSPSNG00000007054) #11 TMEM171 (ENSPSNG00000007005) #12 TMEM174 (ENSPSNG00000006973) #13 FOXD1 (ENSPSNG00000006952) BTF3 (ENSPSNG00000006904) #15 ANKRA2 (ENSPSNG00000006865) #16 UTP15 (ENSPSNG00000006804) #17 ARHGEF28 (ENSPSNG00000006700) #18 ENC1 (ENSPSNG00000006635) #19 HEXB (ENSPSNG00000006550) #20 GFM2 (ENSPSNG00000006458) #21 ENSPSNG00000006396 ##22 FAM169A (ENSPSNG00000006255) #24 GCNT4 (ENSPSNG00000006178) ANKRD31 (ENSPSNG00000006120) #27 HMGCR (ENSPSNG00000006005) #28 CERT1 (ENSPSNG00000005809) #29 POLK (ENSPSNG00000005609) #30 POC5 (ENSPSNG00000005438) #32 ENSPSNG00000005362 SV2C (ENSPSNG00000005309) #35 F2RL2 (ENSPSNG00000005286) #36 IQGAP2 (ENSPSNG00000005144) #37 F2R (ENSPSNG00000005065) ##36 F2RL1 (ENSPSNG00000005843) ##36 S100Z (ENSPSNG00000005821) CRHBP (ENSPSNG00000005773) Dolphin MODERN SPECIES 1888 HEXB (ENSTTRG00000005166) #20 GFM2 (ENSTTRG00000005188) #21 ENSTTRG00000005219 ##22 FAM169A (ENSTTRG00000005228) #24 Sperm whale MODERN SPECIES 19 MRPS27 (ENSPCTG00005001179) PTCD2 (ENSPCTG00005001224) ZNF366 (ENSPCTG00005001288) #7 TNPO1 (ENSPCTG00005001308) #9 FCHO2 (ENSPCTG00005001361) #11 TMEM171 (ENSPCTG00005001394) #12 TMEM174 (ENSPCTG00005001406) #13 FOXD1 (ENSPCTG00005001417) BTF3 (ENSPCTG00005001434) #15 ANKRA2 (ENSPCTG00005001459) #16 UTP15 (ENSPCTG00005001482) #17 ARHGEF28 (ENSPCTG00005001544) #18 ENC1 (ENSPCTG00005001616) #19 HEXB (ENSPCTG00005001638) #20 GFM2 (ENSPCTG00005001720) #21 NSA2 (ENSPCTG00005001800) ##22 FAM169A (ENSPCTG00005001823) #24 ENSPCTG00005001839 GCNT4 (ENSPCTG00005001860) ANKRD31 (ENSPCTG00005001908) #27 HMGCR (ENSPCTG00005002015) #28 COL4A3BP (ENSPCTG00005002102) #29 POLK (ENSPCTG00005002299) #30 POC5 (ENSPCTG00005002372) #32 SV2C (ENSPCTG00005002439) #35 IQGAP2 (ENSPCTG00005002535) #37 F2RL2 (ENSPCTG00005002767) #36 ENSPCTG00005002778 F2R (ENSPCTG00005002792) ##36 F2RL1 (ENSPCTG00005002799) ##36 S100Z (ENSPCTG00005002807) Camelidae ANCESTRAL SPECIES 1 ENSGT00390000007246 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00390000018706.n ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Arabian camel MODERN SPECIES 1 KCTD14 (ENSCDRG00005005593) THRSP (ENSCDRG00005005606) NDUFC2 (ENSCDRG00005005626) ALG8 (ENSCDRG00005005652) KCTD21 (ENSCDRG00005005709) USP35 (ENSCDRG00005005740) GAB2 (ENSCDRG00005005876) NARS2 (ENSCDRG00005005899) TENM4 (ENSCDRG00005005968) PRCP (ENSCDRG00005000165) DDIAS (ENSCDRG00005000219) RAB30 (ENSCDRG00005000271) PCF11 (ENSCDRG00005000302) ANKRD42 (ENSCDRG00005000336) CCDC90B (ENSCDRG00005000363) ENSCDRG00005000387 ##22 DLG2 (ENSCDRG00005000832) TMEM126B (ENSCDRG00005005932) ENSCDRG00005005974 CREBZF (ENSCDRG00005006000) ENSCDRG00005006034 CCDC89 (ENSCDRG00005006041) SYTL2 (ENSCDRG00005006073) CCDC83 (ENSCDRG00005006299) PICALM (ENSCDRG00005006440) EED (ENSCDRG00005007103) HIKESHI (ENSCDRG00005007926) CCDC81 (ENSCDRG00005008087) ENSCDRG00005008636 ME3 (ENSCDRG00005008675) PRSS23 (ENSCDRG00005008761) Alpaca MODERN SPECIES 701 HEXB (ENSVPAG00000007366) #20 GFM2 (ENSVPAG00000007367) #21 ENSVPAG00000007368 ##22 FAM169A (ENSVPAG00000007369) #24 Suina ANCESTRAL SPECIES 11 ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Chacoan peccary MODERN SPECIES 203 CPLX2 (ENSCWAG00000002603) ENSCWAG00000002610 HRH2 (ENSCWAG00000002618) SFXN1 (ENSCWAG00000002627) FCHO2 (ENSCWAG00000002642) #11 TMEM171 (ENSCWAG00000002661) #12 TMEM174 (ENSCWAG00000002666) #13 FOXD1 (ENSCWAG00000002672) ENSCWAG00000002679 ##15 ANKRA2 (ENSCWAG00000002689) #16 UTP15 (ENSCWAG00000002708) #17 ARHGEF28 (ENSCWAG00000002807) #18 ENC1 (ENSCWAG00000003195) #19 HEXB (ENSCWAG00000003202) #20 GFM2 (ENSCWAG00000003240) #21 ENSCWAG00000003282 ##22 FAM169A (ENSCWAG00000003310) #24 GCNT4 (ENSCWAG00000003361) Pig DUPLICATION Pig MODERN SPECIES 2 TPP2 (ENSSSCG00000009528) FGF14 (ENSSSCG00000009527) ITGBL1 (ENSSSCG00000009526) NALCN (ENSSSCG00000038949) ENSSSCG00000032891 TMTC4 (ENSSSCG00000009524) ENSSSCG00000009523 PCCA (ENSSSCG00000009522) ZIC2 (ENSSSCG00000009520) ZIC5 (ENSSSCG00000009521) ENSSSCG00000039610 CLYBL (ENSSSCG00000009519) TM9SF2 (ENSSSCG00000031808) ENSSSCG00000031278 GPR183 (ENSSSCG00000009517) ENSSSCG00000035363 ##22 GPR18 (ENSSSCG00000031999) UBAC2 (ENSSSCG00000009516) DOCK9 (ENSSSCG00000022112) SLC15A1 (ENSSSCG00000009513) STK24 (ENSSSCG00000009511) FARP1 (ENSSSCG00000026863) IPO5 (ENSSSCG00000009509) ENSSSCG00000033091 RAP2A (ENSSSCG00000039812) ENSSSCG00000051098 MBNL2 (ENSSSCG00000009505) HS6ST3 (ENSSSCG00000009503) UGGT2 (ENSSSCG00000009502) DNAJC3 (ENSSSCG00000026082) DZIP1 (ENSSSCG00000009501) Pig MODERN SPECIES 10 HRH2 (ENSSSCG00000029096) SFXN1 (ENSSSCG00000014063) FCHO2 (ENSSSCG00000022661) #11 TMEM171 (ENSSSCG00000014066) #12 ENSSSCG00000046532 TMEM174 (ENSSSCG00000014067) #13 ENSSSCG00000053209 FOXD1 (ENSSSCG00000035878) ENSSSCG00000014071 ##15 ANKRA2 (ENSSSCG00000014070) #16 UTP15 (ENSSSCG00000014068) #17 ARHGEF28 (ENSSSCG00000028317) #18 ENC1 (ENSSSCG00000014072) #19 HEXB (ENSSSCG00000014073) #20 GFM2 (ENSSSCG00000014074) #21 ENSSSCG00000014075 ##22 FAM169A (ENSSSCG00000014076) #24 GCNT4 (ENSSSCG00000029710) ENSSSCG00000014078 ANKRD31 (ENSSSCG00000014079) #27 HMGCR (ENSSSCG00000014080) #28 CERT1 (ENSSSCG00000014081) #29 ENSSSCG00000058855 POLK (ENSSSCG00000014082) #30 ANKDD1B (ENSSSCG00000014083) #31 POC5 (ENSSSCG00000014084) #32 SV2C (ENSSSCG00000034062) #35 IQGAP2 (ENSSSCG00000014088) #37 ENSSSCG00000045040 F2RL2 (ENSSSCG00000037582) #36 F2R (ENSSSCG00000035355) ##36 Atlantogenata ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Xenarthra ANCESTRAL SPECIES ENSGT00390000018706.m.a ##22 Sloth MODERN SPECIES 5165 ENSCHOG00000012126 ##22 Armadillo MODERN SPECIES 2841 ENSDNOG00000031875 ENSDNOG00000036465 OR13C4 (ENSDNOG00000032405) ENSDNOG00000024462 ENSDNOG00000048110 ##22 ENSDNOG00000000797 Theria ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Marsupialia ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Marsupialia_b ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Diprotodontia ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Wallaby MODERN SPECIES 7017 ENSMEUG00000003037 ##22 Eutheria ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Chiroptera ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Microchiroptera ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Greater horseshoe bat MODERN SPECIES NHSL2 (ENSRFEG00010000033) ERCC6L (ENSRFEG00010000032) PIN4 (ENSRFEG00010000031) ENSRFEG00010000030 ENSRFEG00010000029 HDAC8 (ENSRFEG00010000028) PHKA1 (ENSRFEG00010000027) ENSRFEG00010000026 ENSRFEG00010000025 ENSRFEG00010000024 NAP1L2 (ENSRFEG00010000023) ENSRFEG00010000022 ENSRFEG00010000021 CDX4 (ENSRFEG00010000020) CHIC1 (ENSRFEG00010000019) ENSRFEG00010000018 ##22 ENSRFEG00010000015 SLC16A2 (ENSRFEG00010000014) RLIM (ENSRFEG00010000013) NEXMIF (ENSRFEG00010000012) ABCB7 (ENSRFEG00010000009) UPRT (ENSRFEG00010000008) ZDHHC15 (ENSRFEG00010000007) MAGEE2 (ENSRFEG00010000006) PBDC1 (ENSRFEG00010000005) ENSRFEG00010000004 ENSRFEG00010000002 Carnivora ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Felidae ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Panthera ANCESTRAL SPECIES 32 ENSGT00390000001114 ENSGT00940000162420 ENSGT00390000006200 ENSGT00940000155195 ENSGT00940000157937 ENSGT00940000158520 ENSGT00940000157316 ENSGT00940000161004 ENSGT00940000161034 ENSGT00940000156099 ENSGT00940000153881.a ENSGT00940000158456 ENSGT00940000153433.B.a.b ENSGT00410000025698.a ENSGT00390000011270 ENSGT00390000018706.n ##22 ENSGT00390000001960 ENSGT00940000157390 ENSGT00940000159171 ENSGT00940000159967 ENSGT00900000143215 ENSGT00550000074815 ENSGT00940000157359 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000157560.e ENSGT00390000004585 ENSGT00940000159665 ENSGT00940000162410 ENSGT00950000183093.C ENSGT00390000017384.hb Tiger MODERN SPECIES 10 CDC73 (ENSPTIG00000019387) GLRX2 (ENSPTIG00000017924) RO60 (ENSPTIG00000015535) UCHL5 (ENSPTIG00000011801) RGS2 (ENSPTIG00000009942) RGS13 (ENSPTIG00000009097) RGS1 (ENSPTIG00000006670) RGS21 (ENSPTIG00000005505) RGS18 (ENSPTIG00000004549) BRINP3 (ENSPTIG00000019445) KCTD3 (ENSPTIG00000017343) USH2A (ENSPTIG00000008076) ESRRG (ENSPTIG00000020932) GPATCH2 (ENSPTIG00000020705) SPATA17 (ENSPTIG00000020333) ENSPTIG00000006374 ##22 RRP15 (ENSPTIG00000019968) TGFB2 (ENSPTIG00000019477) LYPLAL1 (ENSPTIG00000018273) SLC30A10 (ENSPTIG00000016308) ENSPTIG00000015776 EPRS1 (ENSPTIG00000012991) BPNT1 (ENSPTIG00000010100) IARS2 (ENSPTIG00000002279) RAB3GAP2 (ENSPTIG00000018004) Panthera_a ANCESTRAL SPECIES 47 ENSGT00390000001114 ENSGT00940000162420 ENSGT00390000006200 ENSGT00940000155195 ENSGT00940000157937 ENSGT00940000158520 ENSGT00940000157316 ENSGT00940000161004 ENSGT00940000161034 ENSGT00940000156099 ENSGT00940000153881.a ENSGT00940000158456 ENSGT00940000153433.B.a.b ENSGT00410000025698.a ENSGT00390000011270 ENSGT00390000018706.n ##22 ENSGT00390000001960 ENSGT00940000157390 ENSGT00940000159171 ENSGT00940000159967 ENSGT00900000143215 ENSGT00550000074815 ENSGT00940000157359 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000157560.e ENSGT00390000004585 ENSGT00940000159665 ENSGT00940000162410 ENSGT00950000183093.C ENSGT00390000017384.hb lion DUPLICATION lion MODERN SPECIES 13 DMRT2 (ENSPLOG00000017190) DMRT3 (ENSPLOG00000017150) DMRT1 (ENSPLOG00000017065) KANK1 (ENSPLOG00000016894) DOCK8 (ENSPLOG00000015754) ENSPLOG00000014827 ENSPLOG00000014655 PGM5 (ENSPLOG00000014414) TMEM252 (ENSPLOG00000014372) PIP5K1B (ENSPLOG00000014086) FXN (ENSPLOG00000013999) TJP2 (ENSPLOG00000013563) ENTREP1 (ENSPLOG00000013369) APBA1 (ENSPLOG00000013238) PTAR1 (ENSPLOG00000013055) ENSPLOG00000012981 ##22 CFAP95 (ENSPLOG00000012861) MAMDC2 (ENSPLOG00000012728) ENSPLOG00000012666 KLF9 (ENSPLOG00000012614) TRPM3 (ENSPLOG00000011963) CEMIP2 (ENSPLOG00000011681) ABHD17B (ENSPLOG00000011623) C9orf85 (ENSPLOG00000011580) GDA (ENSPLOG00000011139) ZFAND5 (ENSPLOG00000011064) ENSPLOG00000011025 ALDH1A1 (ENSPLOG00000010882) ENSPLOG00000010872 ANXA1 (ENSPLOG00000010824) RORB (ENSPLOG00000010628) lion MODERN SPECIES 17 RO60 (ENSPLOG00000021929) UCHL5 (ENSPLOG00000021751) RGS2 (ENSPLOG00000021695) RGS13 (ENSPLOG00000021681) RGS1 (ENSPLOG00000021660) RGS21 (ENSPLOG00000021639) RGS18 (ENSPLOG00000021616) ENSPLOG00000021593 ENSPLOG00000021580 BRINP3 (ENSPLOG00000021551) KCTD3 (ENSPLOG00000021520) USH2A (ENSPLOG00000021267) ESRRG (ENSPLOG00000021133) GPATCH2 (ENSPLOG00000020962) SPATA17 (ENSPLOG00000020900) ENSPLOG00000020883 ##22 RRP15 (ENSPLOG00000020868) TGFB2 (ENSPLOG00000020798) LYPLAL1 (ENSPLOG00000020764) SLC30A10 (ENSPLOG00000020726) ENSPLOG00000020704 EPRS1 (ENSPLOG00000020627) BPNT1 (ENSPLOG00000020547) IARS2 (ENSPLOG00000020446) RAB3GAP2 (ENSPLOG00000020233) MARK1 (ENSPLOG00000019675) C1orf115 (ENSPLOG00000019618) MTARC2 (ENSPLOG00000019525) MTARC1 (ENSPLOG00000019449) HLX (ENSPLOG00000019394) ENSPLOG00000019364 Caniformia ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Ursidae ANCESTRAL SPECIES 15 ENSGT00940000155492.b ENSGT00940000159713 ENSGT00940000157165 ENSGT00950000182942.b.b ENSGT00950000182942.b.a.a ENSGT00950000182942.b.a.b ENSGT00940000157590 ENSGT00390000013297 ENSGT00950000183064.a.b.a ENSGT00940000153566.b ENSGT00940000156937 ENSGT00940000155900 ENSGT00390000002749 ENSGT00940000160304 ENSGT00940000158679 ENSGT00390000018706.n ##22 ENSGT01010000222806.a ENSGT00950000182856.b ENSGT00940000155801 ENSGT00940000159642 ENSGT00940000153306.A.b ENSGT00940000155418.b ENSGT00530000063252.a.a.s.b ENSGT00940000158740 ENSGT00390000016213 ENSGT00940000157181 ENSGT00940000159663 ENSGT00940000154313.d ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b ENSGT00940000158261 Ursus ANCESTRAL SPECIES 71 ENSGT00940000157165 ENSGT00950000182942.b.b ENSGT00950000182942.b.a.a ENSGT00950000182942.b.a.b ENSGT00940000157590 ENSGT00390000013297 ENSGT00950000183064.a.b.a ENSGT00940000153566.b ENSGT00940000156937 ENSGT00940000155900 ENSGT00390000002749 ENSGT00940000160304 ENSGT00940000158679 ENSGT00390000018706.n ##22 ENSGT01010000222806.a ENSGT00950000182856.b ENSGT00940000155801 ENSGT00940000159642 ENSGT00940000153306.A.b ENSGT00940000155418.b.e ENSGT00530000063252.a.a.s.b ENSGT00940000158740 ENSGT00390000016213 ENSGT00940000157181 ENSGT00940000159663 ENSGT00940000154313.d ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b ENSGT00940000158261 Polar bear MODERN SPECIES 149 NAALAD2 (ENSUMAG00000006599) B3GAT1 (ENSUMAG00000006581) GLB1L2 (ENSUMAG00000006270) GLB1L3 (ENSUMAG00000006221) ENSUMAG00000006196 ACAD8 (ENSUMAG00000006162) THYN1 (ENSUMAG00000006152) VPS26B (ENSUMAG00000006148) NCAPD3 (ENSUMAG00000006139) JAM3 (ENSUMAG00000006131) IGSF9B (ENSUMAG00000006086) SPATA19 (ENSUMAG00000006059) ENSUMAG00000006050 ENSUMAG00000006033 NTM (ENSUMAG00000006020) ENSUMAG00000006018 ##22 ENSUMAG00000006010 SNX19 (ENSUMAG00000005994) ADAMTS15 (ENSUMAG00000005954) ADAMTS8 (ENSUMAG00000005935) ZBTB44 (ENSUMAG00000005929) ST14 (ENSUMAG00000005834) APLP2 (ENSUMAG00000003832) ENSUMAG00000003614 PRDM10 (ENSUMAG00000003167) ENSUMAG00000003091 NFRKB (ENSUMAG00000003083) TMEM45B (ENSUMAG00000003071) BARX2 (ENSUMAG00000003063) ARHGAP32 (ENSUMAG00000002974) KCNJ5 (ENSUMAG00000002942) American black bear MODERN SPECIES 743 ENSUAMG00000024466 ENSUAMG00000024463 ##22 ENSUAMG00000024461 Giant Panda MODERN SPECIES 18 CNTN5 (ENSAMEG00000003430) ARHGAP42 (ENSAMEG00000014849) ENSAMEG00000017449 ENSAMEG00000023980 ENSAMEG00000007465 GLB1L2 (ENSAMEG00000007409) GLB1L3 (ENSAMEG00000007400) ENSAMEG00000007367 ENSAMEG00000007294 ENSAMEG00000007275 NCAPD3 (ENSAMEG00000007193) JAM3 (ENSAMEG00000007109) IGSF9B (ENSAMEG00000007065) SPATA19 (ENSAMEG00000007054) OPCML (ENSAMEG00000001963) ENSAMEG00000025068 ##22 NTM (ENSAMEG00000001967) SNX19 (ENSAMEG00000001981) ADAMTS15 (ENSAMEG00000002017) ADAMTS8 (ENSAMEG00000002096) ZBTB44 (ENSAMEG00000002194) ST14 (ENSAMEG00000002200) APLP2 (ENSAMEG00000002280) PRDM10 (ENSAMEG00000002425) NFRKB (ENSAMEG00000002449) TMEM45B (ENSAMEG00000002508) BARX2 (ENSAMEG00000002531) ARHGAP32 (ENSAMEG00000002536) KCNJ5 (ENSAMEG00000002556) KCNJ1 (ENSAMEG00000019148) FLI1 (ENSAMEG00000025623) Mustelinae ANCESTRAL SPECIES 38 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.n ##22 ENSGT00390000018706.m.a ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618.g #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00390000001362 American mink MODERN SPECIES 272 TMEM171 (ENSNVIG00000014663) #12 TMEM174 (ENSNVIG00000014653) #13 ENSNVIG00000014647 ANKRA2 (ENSNVIG00000014580) #16 UTP15 (ENSNVIG00000014499) #17 ARHGEF28 (ENSNVIG00000013948) #18 ENSNVIG00000013901 #20 RRF2M (ENSNVIG00000013832) #21 ENSNVIG00000013800 ##22 F169A (ENSNVIG00000013763) #24 GCNT4 (ENSNVIG00000013748) ENSNVIG00000013716 #27 HMGCR (ENSNVIG00000013689) #28 CERT1 (ENSNVIG00000013434) #29 POLK (ENSNVIG00000013286) #30 ANKDD1B (ENSNVIG00000013231) #31 POC5 (ENSNVIG00000013118) #32 Canidae ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Red fox MODERN SPECIES 3 NCOA2 (ENSVVUG00000018941) ENSVVUG00000019004 TRAM1 (ENSVVUG00000019016) LACTB2 (ENSVVUG00000019022) XKR9 (ENSVVUG00000019026) ENSVVUG00000019029 ENSVVUG00000019030 EYA1 (ENSVVUG00000019043) MSC (ENSVVUG00000019072) ENSVVUG00000019079 TRPA1 (ENSVVUG00000019090) ENSVVUG00000019137 TERF1 (ENSVVUG00000019142) ENSVVUG00000019148 SBSPON (ENSVVUG00000019158) ENSVVUG00000019162 ##22 CUNH8orf89 (ENSVVUG00000019177) ENSVVUG00000019183 ##8 RDH10 (ENSVVUG00000019187) STAU2 (ENSVVUG00000019217) UBE2W (ENSVVUG00000019463) ENSVVUG00000019482 ENSVVUG00000019485 TMEM70 (ENSVVUG00000019487) LY96 (ENSVVUG00000019489) JPH1 (ENSVVUG00000019494) GDAP1 (ENSVVUG00000019503) PI15 (ENSVVUG00000019517) CRISPLD1 (ENSVVUG00000019525) HNF4G (ENSVVUG00000019569) ZFHX4 (ENSVVUG00000019627) Canis_lupus ANCESTRAL SPECIES ENSGT00940000159109 ENSGT00390000004010.a.a ENSGT00950000182935.A ENSGT00940000154315.a ENSGT00950000182696.B.b ENSGT00940000153116.A ENSGT00940000162678.c.a ENSGT00830000128447.d ENSGT00730000111349.k.b ENSGT00390000011694 ENSGT00940000157783 ENSGT00940000160506 ENSGT00940000162766 ENSGT00940000163003 ENSGT00940000163805 ENSGT00390000018706.n ##22 ENSGT00940000161634 ENSGT00940000161069 ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b Dingo MODERN SPECIES 125 SYNGR4 (ENSCAFG00020026441) TMEM143 (ENSCAFG00020026442) EMP3 (ENSCAFG00020026443) ODAD1 (ENSCAFG00020026444) ENSCAFG00020026445 ENSCAFG00020026447 CARD8 (ENSCAFG00020026448) ENSCAFG00020026449 ZSWIM9 (ENSCAFG00020026450) LIG1 (ENSCAFG00020026453) CABP5 (ENSCAFG00020026519) ENSCAFG00020026523 ENSCAFG00020026524 BSPH1 (ENSCAFG00020026526) ENSCAFG00020026528 ENSCAFG00020026529 ##22 CRX (ENSCAFG00020026531) EHD2 (ENSCAFG00020000226) BICRA (ENSCAFG00020000660) ZNF541 (ENSCAFG00020000764) NAPA (ENSCAFG00020000831) KPTN (ENSCAFG00020000973) SLC8A2 (ENSCAFG00020001118) MEIS3 (ENSCAFG00020001147) DHX34 (ENSCAFG00020001163) C5AR2 (ENSCAFG00020001172) C5AR1 (ENSCAFG00020001178) INAFM1 (ENSCAFG00020001184) CCDC9 (ENSCAFG00020001196) ENSCAFG00020001204 SAE1 (ENSCAFG00020001254) Dog DUPLICATION Dog MODERN SPECIES GRWD1 (ENSCAFG00845001397) GRIN2D (ENSCAFG00845001419) ENSCAFG00845001457 SYNGR4 (ENSCAFG00845001495) TMEM143 (ENSCAFG00845001526) EMP3 (ENSCAFG00845001628) CCDC114 (ENSCAFG00845001666) ENSCAFG00845001715 CARD8 (ENSCAFG00845001775) ENSCAFG00845001862 ZSWIM9 (ENSCAFG00845001889) LIG1 (ENSCAFG00845002011) CABP5 (ENSCAFG00845002104) ELSPBP1 (ENSCAFG00845002136) ENSCAFG00845002180 ENSCAFG00845002194 ##22 CRX (ENSCAFG00845002208) ENSCAFG00845002224 NOP53 (ENSCAFG00845002253) EHD2 (ENSCAFG00845002294) BICRA (ENSCAFG00845002344) ZNF541 (ENSCAFG00845002412) NAPA (ENSCAFG00845002467) KPTN (ENSCAFG00845002500) SLC8A2 (ENSCAFG00845002555) MEIS3 (ENSCAFG00845002685) DHX34 (ENSCAFG00845002720) C5AR2 (ENSCAFG00845002732) C5AR1 (ENSCAFG00845002761) INAFM1 (ENSCAFG00845002784) CCDC9 (ENSCAFG00845002800) Dog MODERN SPECIES 35 ENSCAFG00845012857 NVL (ENSCAFG00845012656) CNIH4 (ENSCAFG00845012452) WDR26 (ENSCAFG00845012382) CNIH3 (ENSCAFG00845012278) ENSCAFG00845012260 ENSCAFG00845012247 DNAH14 (ENSCAFG00845011498) LBR (ENSCAFG00845010980) ENAH (ENSCAFG00845009892) SRP9 (ENSCAFG00845009505) EPHX1 (ENSCAFG00845009397) TMEM63A (ENSCAFG00845009155) ENSCAFG00845009114 PYCR2 (ENSCAFG00845009034) ENSCAFG00845009009 ##22 ENSCAFG00845008972 SDE2 (ENSCAFG00845008939) ENSCAFG00845008917 ACBD3 (ENSCAFG00845008884) ENSCAFG00845008860 MIXL1 (ENSCAFG00845008836) LIN9 (ENSCAFG00845008477) PARP1 (ENSCAFG00845008325) STUM (ENSCAFG00845008283) ITPKB (ENSCAFG00845008212) PSEN2 (ENSCAFG00845008023) COQ8A (ENSCAFG00845007817) ENSCAFG00845007754 CDC42BPA (ENSCAFG00845007016) AHCTF1 (ENSCAFG00845006427) Artiodactyla ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Camelidae ANCESTRAL SPECIES 1 ENSGT00390000009329.b ENSGT00940000155498 #7 ENSGT01100000263506.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706.m.a ##22 ENSGT00390000018706.n ##22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00390000004454 #32 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Arabian camel MODERN SPECIES 22 MRPS27 (ENSCDRG00005003313) PTCD2 (ENSCDRG00005003255) ZNF366 (ENSCDRG00005003227) #7 ENSCDRG00005003212 TNPO1 (ENSCDRG00005003173) #9 FCHO2 (ENSCDRG00005003139) #11 TMEM171 (ENSCDRG00005003113) #12 TMEM174 (ENSCDRG00005003105) #13 ENSCDRG00005003045 ##15 ANKRA2 (ENSCDRG00005003023) #16 UTP15 (ENSCDRG00005002976) #17 ARHGEF28 (ENSCDRG00005002784) #18 ENC1 (ENSCDRG00005002750) #19 HEXB (ENSCDRG00005002726) #20 GFM2 (ENSCDRG00005002671) #21 ENSCDRG00005002639 ##22 FAM169A (ENSCDRG00005002601) #24 ENSCDRG00005002592 GCNT4 (ENSCDRG00005002583) ANKRD31 (ENSCDRG00005002546) #27 HMGCR (ENSCDRG00005002491) #28 CERT1 (ENSCDRG00005001455) #29 POLK (ENSCDRG00005001206) #30 ANKDD1B (ENSCDRG00005001160) #31 POC5 (ENSCDRG00005001127) #32 SV2C (ENSCDRG00005001113) #35 F2RL2 (ENSCDRG00005001095) #36 IQGAP2 (ENSCDRG00005000766) #37 F2R (ENSCDRG00005000707) ##36 F2RL1 (ENSCDRG00005000688) ##36 S100Z (ENSCDRG00005000678) Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Pecora ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Percora_a ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Bovidae ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Caprinae ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Rambouillet Sheep MODERN SPECIES 11 FKBP7 (ENSOARG00020020704) PLEKHA3 (ENSOARG00020020544) ENSOARG00020020514 ENSOARG00020020485 ENSOARG00020020425 ENSOARG00020020356 SESTD1 (ENSOARG00020020002) ZNF385B (ENSOARG00020019707) CWC22 (ENSOARG00020019564) UBE2E3 (ENSOARG00020019367) ITGA4 (ENSOARG00020019068) NEUROD1 (ENSOARG00020018887) ITPRID2 (ENSOARG00020018365) PPP1R1C (ENSOARG00020018285) PDE1A (ENSOARG00020017541) ENSOARG00020017466 ##22 DNAJC10 (ENSOARG00020017229) ENSOARG00020017188 FRZB (ENSOARG00020017100) NCKAP1 (ENSOARG00020016433) DUSP19 (ENSOARG00020016314) NUP35 (ENSOARG00020016181) ENSOARG00020016153 ZNF804A (ENSOARG00020016116) ENSOARG00020016097 ENSOARG00020016012 ENSOARG00020015920 ZC3H15 (ENSOARG00020015820) ITGAV (ENSOARG00020015094) FAM171B (ENSOARG00020014853) CALCRL (ENSOARG00020014547) Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 1221 ENSCHYG00000020404 ##22 Yarkand deer MODERN SPECIES 5 ENSCHYG00000022352 ENSCHYG00000022399 ENSCHYG00000022439 F13B (ENSCHYG00000022496) CFHR5 (ENSCHYG00000022635) ASPM (ENSCHYG00000022717) ZBTB41 (ENSCHYG00000023138) CRB1 (ENSCHYG00000023193) DENND1B (ENSCHYG00000023290) ENSCHYG00000023653 LHX9 (ENSCHYG00000023703) NEK7 (ENSCHYG00000023853) ENSCHYG00000023961 ATP6V1G3 (ENSCHYG00000024007) PTPRC (ENSCHYG00000004706) ENSCHYG00000004736 ##22 NR5A2 (ENSCHYG00000004885) ZNF281 (ENSCHYG00000004905) KIF14 (ENSCHYG00000004913) DDX59 (ENSCHYG00000004960) CAMSAP2 (ENSCHYG00000005028) GPR25 (ENSCHYG00000005126) ENSCHYG00000005160 KIF21B (ENSCHYG00000005305) CACNA1S (ENSCHYG00000005777) ASCL5 (ENSCHYG00000005879) TMEM9 (ENSCHYG00000005897) ENSCHYG00000005938 PKP1 (ENSCHYG00000005976) ENSCHYG00000005996 CYB5R1 (ENSCHYG00000006030) Yarkand deer MODERN SPECIES 5 SHCBP1L (ENSCHYG00000017219) DHX9 (ENSCHYG00000017048) NPL (ENSCHYG00000016787) ENSCHYG00000016746 RGS8 (ENSCHYG00000016656) RGS16 (ENSCHYG00000016591) RNASEL (ENSCHYG00000016523) RGSL1 (ENSCHYG00000016308) ENSCHYG00000016265 ENSCHYG00000016249 TEDDM1 (ENSCHYG00000016223) ENSCHYG00000016073 ZNF648 (ENSCHYG00000015939) ENSCHYG00000015906 CACNA1E (ENSCHYG00000013402) ENSCHYG00000013249 ##22 IER5 (ENSCHYG00000013220) ENSCHYG00000013208 MR1 (ENSCHYG00000013091) STX6 (ENSCHYG00000013021) KIAA1614 (ENSCHYG00000012980) XPR1 (ENSCHYG00000012872) ACBD6 (ENSCHYG00000012769) LHX4 (ENSCHYG00000012691) QSOX1 (ENSCHYG00000012535) CEP350 (ENSCHYG00000011715) TOR1AIP1 (ENSCHYG00000011139) TOR1AIP2 (ENSCHYG00000011025) FAM163A (ENSCHYG00000010948) TDRD5 (ENSCHYG00000010557) NPHS2 (ENSCHYG00000010395) Euarchontoglires ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Primates ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Simiiformes ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Cebidae ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Capuchin MODERN SPECIES 68 TRPS1 (ENSCCAG00000027398) ENSCCAG00000033694 ##22 EIF3H (ENSCCAG00000018374) UTP23 (ENSCCAG00000030228) RAD21 (ENSCCAG00000035186) AARD (ENSCCAG00000028143) SLC30A8 (ENSCCAG00000025975) MED30 (ENSCCAG00000033344) EXT1 (ENSCCAG00000002703) SAMD12 (ENSCCAG00000033351) TNFRSF11B (ENSCCAG00000036831) COLEC10 (ENSCCAG00000024940) MAL2 (ENSCCAG00000029707) CCN3 (ENSCCAG00000032102) ENPP2 (ENSCCAG00000029009) TAF2 (ENSCCAG00000023816) DSCC1 (ENSCCAG00000021579) Catarrhini ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Hominoidea ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Gibbon MODERN SPECIES 10 ENSNLEG00000016673 ENSNLEG00000034642 ENSNLEG00000032096 TEKT4 (ENSNLEG00000016708) FBP2 (ENSNLEG00000016721) FBP1 (ENSNLEG00000016727) AOPEP (ENSNLEG00000016734) FANCC (ENSNLEG00000016749) ENSNLEG00000010465 PTCH1 (ENSNLEG00000016755) ENSNLEG00000032943 ENSNLEG00000016784 HSD17B3 (ENSNLEG00000032342) SLC35D2 (ENSNLEG00000016807) ENSNLEG00000016813 ENSNLEG00000029121 ##22 HABP4 (ENSNLEG00000016819) CDC14B (ENSNLEG00000016822) PRXL2C (ENSNLEG00000036194) ENSNLEG00000027861 ZNF510 (ENSNLEG00000016838) ZNF782 (ENSNLEG00000016845) ENSNLEG00000018342 CTSV (ENSNLEG00000016847) ENSNLEG00000029601 ENSNLEG00000016858 CCDC180 (ENSNLEG00000016862) TDRD7 (ENSNLEG00000016885) TMOD1 (ENSNLEG00000016899) TSTD2 (ENSNLEG00000016904) NCBP1 (ENSNLEG00000016909) Cercopithecidae ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Macaca ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Macaca_a ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Crab-eating macaque MODERN SPECIES ENSMFAG00000061533 PHGDH (ENSMFAG00000032226) HMGCS2 (ENSMFAG00000043696) REG4 (ENSMFAG00000005388) ADAM30 (ENSMFAG00000036625) NOTCH2 (ENSMFAG00000001144) SEC22B (ENSMFAG00000043165) ENSMFAG00000047720 ENSMFAG00000003812 ENSMFAG00000035716 ENSMFAG00000063634 ENSMFAG00000057159 ENSMFAG00000059274 ENSMFAG00000001098 CD160 (ENSMFAG00000043835) ENSMFAG00000041095 ##22 PDZK1 (ENSMFAG00000018292) RNF115 (ENSMFAG00000042451) POLR3C (ENSMFAG00000040338) NUDT17 (ENSMFAG00000042456) PIAS3 (ENSMFAG00000001990) ANKRD35 (ENSMFAG00000036117) ITGA10 (ENSMFAG00000043309) PEX11B (ENSMFAG00000052735) RBM8A (ENSMFAG00000045376) LIX1L (ENSMFAG00000031809) ANKRD34A (ENSMFAG00000050371) POLR3GL (ENSMFAG00000001219) TXNIP (ENSMFAG00000046327) HJV (ENSMFAG00000045741) ENSMFAG00000052714 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Drill MODERN SPECIES 1162 ENSMLEG00000023206 ENSMLEG00000044374 ENSMLEG00000029169 PDZK1 (ENSMLEG00000043823) CD160 (ENSMLEG00000033371) RNF115 (ENSMLEG00000031561) ENSMLEG00000000453 ##22 POLR3C (ENSMLEG00000031091) NUDT17 (ENSMLEG00000036200) PIAS3 (ENSMLEG00000042795) ANKRD35 (ENSMLEG00000037307) ITGA10 (ENSMLEG00000005613) PEX11B (ENSMLEG00000035501) ENSMLEG00000033510 RBM8A (ENSMLEG00000039155) LIX1L (ENSMLEG00000029509) ANKRD34A (ENSMLEG00000027890) POLR3GL (ENSMLEG00000025659) TXNIP (ENSMLEG00000024506) HJV (ENSMLEG00000036644) ENSMLEG00000001564 ENSMLEG00000028976 Rhinopithecus ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Black snub-nosed monkey MODERN SPECIES 247 NPHP3 (ENSRBIG00000044709) UBA5 (ENSRBIG00000017978) ACKR4 (ENSRBIG00000029323) ACAD11 (ENSRBIG00000039502) DNAJC13 (ENSRBIG00000037521) ACP3 (ENSRBIG00000043824) ENSRBIG00000040578 ENSRBIG00000039274 TMCC3 (ENSRBIG00000034432) ENSRBIG00000026806 ENSRBIG00000016108 ##22 ENSRBIG00000031183 CEP83 (ENSRBIG00000028010) PLXNC1 (ENSRBIG00000002209) ENSRBIG00000029563 CRADD (ENSRBIG00000008849) SOCS2 (ENSRBIG00000028666) ENSRBIG00000029739 ENSRBIG00000044361 ENSRBIG00000041083 ENSRBIG00000042548 EEA1 (ENSRBIG00000033284) PLEKHG7 (ENSRBIG00000042939) ENSRBIG00000025951 ENSRBIG00000044583 ENSRBIG00000041392 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Tree shrew MODERN SPECIES 3815 HEXB (ENSTBEG00000012403) #20 GFM2 (ENSTBEG00000012713) #21 ENSTBEG00000012978 ##22 FAM169A (ENSTBEG00000013351) #24 Glires ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Lagomorpha ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Rabbit DUPLICATION Rabbit MODERN SPECIES 1401 ENSOCUG00000021665 PLS3 (ENSOCUG00000006041) ENSOCUG00000026035 LRCH2 (ENSOCUG00000016267) IL13RA2 (ENSOCUG00000014747) HTR2C (ENSOCUG00000015900) ENSOCUG00000032360 ENSOCUG00000021705 ENSOCUG00000031433 ENSOCUG00000013331 ENSOCUG00000036470 AMOT (ENSOCUG00000004881) LHFPL1 (ENSOCUG00000013710) ENSOCUG00000027921 RTL4 (ENSOCUG00000005364) ENSOCUG00000024931 ##22 ENSOCUG00000036610 TRPC5 (ENSOCUG00000009245) ENSOCUG00000000232 ENSOCUG00000009237 ENSOCUG00000027030 SERTM2 (ENSOCUG00000037981) ENSOCUG00000034349 DCX (ENSOCUG00000007042) CAPN6 (ENSOCUG00000005540) PAK3 (ENSOCUG00000007033) CHRDL1 (ENSOCUG00000006145) RTL9 (ENSOCUG00000007104) AMMECR1 (ENSOCUG00000016969) TMEM164 (ENSOCUG00000016955) ACSL4 (ENSOCUG00000005010) Rabbit MODERN SPECIES DMRTA1 (ENSOCUG00000006069) ELAVL2 (ENSOCUG00000005891) ENSOCUG00000030421 IZUMO3 (ENSOCUG00000022724) TUSC1 (ENSOCUG00000017580) ENSOCUG00000015387 ENSOCUG00000027058 ENSOCUG00000033820 ENSOCUG00000003706 ENSOCUG00000023508 CAAP1 (ENSOCUG00000015461) PLAA (ENSOCUG00000015471) LRRC19 (ENSOCUG00000029228) IFT74 (ENSOCUG00000001320) TEK (ENSOCUG00000017666) ENSOCUG00000036968 ##22 ENSOCUG00000021090 IFNK (ENSOCUG00000002019) ENSOCUG00000017681 C9orf72 (ENSOCUG00000006510) LINGO2 (ENSOCUG00000011540) ENSOCUG00000034768 ENSOCUG00000035009 ENSOCUG00000024611 ACO1 (ENSOCUG00000015960) RIGI (ENSOCUG00000004710) TOPORS (ENSOCUG00000005077) SMIM27 (ENSOCUG00000031843) NDUFB6 (ENSOCUG00000005089) TMEM215 (ENSOCUG00000008320) ENSOCUG00000032079 Rodentia ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Sciuridae ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Marmotini ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Marmotini_b ANCESTRAL SPECIES ENSGT00390000018706.n ##22 Squirrel MODERN SPECIES 149 PTCD2 (ENSSTOG00000006596) ZNF366 (ENSSTOG00000029102) #7 ENSSTOG00000024390 ENSSTOG00000021784 #9 FCHO2 (ENSSTOG00000009856) #11 TMEM171 (ENSSTOG00000025296) #12 TMEM174 (ENSSTOG00000009425) #13 BTF3 (ENSSTOG00000008953) #15 ANKRA2 (ENSSTOG00000008967) #16 UTP15 (ENSSTOG00000027733) #17 ARHGEF28 (ENSSTOG00000009005) #18 ENC1 (ENSSTOG00000029074) #19 ENSSTOG00000027827 HEXB (ENSSTOG00000007903) #20 GFM2 (ENSSTOG00000007931) #21 ENSSTOG00000007959 ##22 FAM169A (ENSSTOG00000007975) #24 ANKRD31 (ENSSTOG00000034383) #27 HMGCR (ENSSTOG00000009610) #28 CERT1 (ENSSTOG00000003170) #29 ENSSTOG00000003205 #30 ANKDD1B (ENSSTOG00000009832) #31 POC5 (ENSSTOG00000009839) #32 SV2C (ENSSTOG00000013490) #35 F2RL2 (ENSSTOG00000034743) #36 IQGAP2 (ENSSTOG00000013504) #37 F2R (ENSSTOG00000008252) ##36 F2RL1 (ENSSTOG00000026512) ##36 S100Z (ENSSTOG00000009498) CRHBP (ENSSTOG00000009510) Platypus MODERN SPECIES PTCD2 (ENSOANG00000029198) ZNF366 (ENSOANG00000047230) #7 ENSOANG00000015787 TNPO1 (ENSOANG00000015785) #9 FCHO2 (ENSOANG00000015784) #11 TMEM171 (ENSOANG00000015783) #12 TMEM174 (ENSOANG00000015913) #13 FOXD1 (ENSOANG00000040807) ENSOANG00000015782 ##15 ANKRA2 (ENSOANG00000010659) #16 UTP15 (ENSOANG00000008695) #17 ARHGEF28 (ENSOANG00000015779) #18 ENC1 (ENSOANG00000015778) #19 HEXB (ENSOANG00000015777) #20 ENSOANG00000015776 #21 NSA2 (ENSOANG00000015775) #22 GCNT4 (ENSOANG00000015773) ENSOANG00000020639 #27 HMGCR (ENSOANG00000014109) #28 CERT1 (ENSOANG00000015771) #29 POLK (ENSOANG00000015770) #30 ENSOANG00000040574 POC5 (ENSOANG00000015769) #32 SV2C (ENSOANG00000015768) #35 IQGAP2 (ENSOANG00000015766) #37 F2RL2 (ENSOANG00000015767) #36 F2R (ENSOANG00000039957) ##36 S100Z (ENSOANG00000015763) CRHBP (ENSOANG00000031473) AGGF1 (ENSOANG00000015762) ENSOANG00000015761 Sauria ANCESTRAL SPECIES 5 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Archelosauria ANCESTRAL SPECIES 7 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00390000003312 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Archosauria ANCESTRAL SPECIES 1 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00390000003312 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00910000147370 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Aves ANCESTRAL SPECIES 4 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00390000003312 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Neognathae ANCESTRAL SPECIES 12 ENSGT00940000155389.c #9 ENSGT00940000155389.d #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.a #15 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00390000003312 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Galloanserae ANCESTRAL SPECIES 11 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389.c #9 ENSGT00940000155389.d #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00390000003312 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Anatidae ANCESTRAL SPECIES 20 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389.c #9 ENSGT00940000155389.d.c #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00390000003312 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Pink-footed goose MODERN SPECIES 183 FOXD1 (ENSABRG00000000141) BTF3 (ENSABRG00000000145) #15 ANKRA2 (ENSABRG00000000152) #16 UTP15 (ENSABRG00000000158) #17 ARHGEF28 (ENSABRG00000000172) #18 ENC1 (ENSABRG00000000310) #19 HEXB (ENSABRG00000000318) #20 GFM2 (ENSABRG00000000353) #21 NSA2 (ENSABRG00000000420) #22 FAM169A (ENSABRG00000000439) #24 GCNT4 (ENSABRG00000000468) ENSABRG00000000482 #27 HMGCR (ENSABRG00000000510) #28 MED18 (ENSABRG00000000557) CERT1 (ENSABRG00000000564) #29 POLK (ENSABRG00000002261) #30 ANKDD1B (ENSABRG00000002279) #31 ENSABRG00000002309 SV2C (ENSABRG00000002343) #35 IQGAP2 (ENSABRG00000003611) #37 F2RL2 (ENSABRG00000014500) #36 F2RL1 (ENSABRG00000014503) ##36 F2R (ENSABRG00000014507) ##36 Duck MODERN SPECIES 4281 ENSAPLG00000019695 ZNF366 (ENSAPLG00000010278) #7 ENSAPLG00000022145 TNPO1 (ENSAPLG00000009619) #9 FCHO2 (ENSAPLG00000009230) #11 TMEM171 (ENSAPLG00000009115) #12 TMEM174 (ENSAPLG00000019942) #13 BTF3 (ENSAPLG00000004652) #15 ANKRA2 (ENSAPLG00000008765) #16 UTP15 (ENSAPLG00000008503) #17 ARHGEF28 (ENSAPLG00000008283) #18 ENSAPLG00000026766 ENC1 (ENSAPLG00000001033) #19 HEXB (ENSAPLG00000007852) #20 GFM2 (ENSAPLG00000007221) #21 NSA2 (ENSAPLG00000007082) #22 FAM169A (ENSAPLG00000006999) #24 GCNT4 (ENSAPLG00000018100) ENSAPLG00000006971 #27 HMGCR (ENSAPLG00000006209) #28 MED18 (ENSAPLG00000006194) CERT1 (ENSAPLG00000005669) #29 POLK (ENSAPLG00000005033) #30 ANKDD1B (ENSAPLG00000004990) #31 ENSAPLG00000004910 ENSAPLG00000021753 SV2C (ENSAPLG00000004492) #35 F2RL2 (ENSAPLG00000004486) #36 IQGAP2 (ENSAPLG00000002992) #37 F2R (ENSAPLG00000001030) ##36 F2RL1 (ENSAPLG00000028669) ##36 Phasianidae ANCESTRAL SPECIES 5 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389.c #9 ENSGT00940000155389.d #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.a #15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618.a #27 ENSGT00940000155305 #28 ENSGT00390000003312 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01070000257240 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Phasianidae_b ANCESTRAL SPECIES 5 ENSGT00940000155897.mb.a ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389.d #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618.a #27 ENSGT00940000155305 #28 ENSGT00390000003312 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01070000257240 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Chicken MODERN SPECIES 131 MRPS27 (ENSGALG00010011649) PTCD2 (ENSGALG00010011572) ZNF366 (ENSGALG00010012008) #7 TNPO1 (ENSGALG00010010186) #9 FCHO2 (ENSGALG00010013297) #11 ENSGALG00010012110 #11 TMEM171 (ENSGALG00010012087) #12 TMEM174 (ENSGALG00010012023) #13 BTF3 (ENSGALG00010010447) ##15 ANKRA2 (ENSGALG00010011774) #16 UTP15 (ENSGALG00010011747) #17 ARHGEF28 (ENSGALG00010011724) #18 ENC1 (ENSGALG00010010905) #19 HEXB (ENSGALG00010010769) #20 GFM2 (ENSGALG00010010733) #21 NSA2 (ENSGALG00010010713) #22 FAM169A (ENSGALG00010010625) #24 GCNT4 (ENSGALG00010011128) ENSGALG00010011059 #27 HMGCR (ENSGALG00010011029) #28 MED18 (ENSGALG00010010990) CERT1 (ENSGALG00010010985) #29 POLK (ENSGALG00010010980) #30 ANKDD1B (ENSGALG00010010962) #31 ENSGALG00010010951 SV2C (ENSGALG00010011403) #35 ENSGALG00010011395 F2RL2 (ENSGALG00010010783) #36 IQGAP2 (ENSGALG00010010688) #37 F2RL1 (ENSGALG00010010599) ##36 S100Z (ENSGALG00010011454) Turkey MODERN SPECIES 1299 ENSMGAG00000005135 ENSMGAG00000022224 ENSMGAG00000005034 ENSMGAG00000022563 ENSMGAG00000005094 ENSMGAG00000004723 ENSMGAG00000018227 MRPS27 (ENSMGAG00000004213) ZNF366 (ENSMGAG00000005028) #7 TNPO1 (ENSMGAG00000022497) #9 ENSMGAG00000019697 #11 ENSMGAG00000004969 #11 TMEM171 (ENSMGAG00000004961) #12 TMEM174 (ENSMGAG00000004988) #13 GCNT4 (ENSMGAG00000004933) ENSMGAG00000005446 #22 FAM169A (ENSMGAG00000003916) #24 ENSMGAG00000021702 ENSMGAG00000001400 #20 ENSMGAG00000022603 ENSMGAG00000022393 #27 ENSMGAG00000017664 ENSMGAG00000014911 #29 ENSMGAG00000004910 ENSMGAG00000017860 #30 ENSMGAG00000002014 #30 ENSMGAG00000022885 #29 SV2C (ENSMGAG00000004851) #35 F2RL2 (ENSMGAG00000016024) #36 IQGAP2 (ENSMGAG00000004823) #37 F2R (ENSMGAG00000020653) ##36 Japanese quail MODERN SPECIES 699 PTCD2 (ENSCJPG00005002087) ZNF366 (ENSCJPG00005002079) #7 ENSCJPG00005002070 #9 ENSCJPG00005002062 #9 ENSCJPG00005002058 #11 ENSCJPG00005002050 #11 TMEM171 (ENSCJPG00005002046) #12 TMEM174 (ENSCJPG00005002042) #13 BTF3 (ENSCJPG00005002024) #15 ANKRA2 (ENSCJPG00005002011) #16 UTP15 (ENSCJPG00005002000) #17 ARHGEF28 (ENSCJPG00005001941) #18 ENC1 (ENSCJPG00005001903) #19 HEXB (ENSCJPG00005001885) #20 GFM2 (ENSCJPG00005001876) #21 NSA2 (ENSCJPG00005001870) #22 FAM169A (ENSCJPG00005001857) #24 GCNT4 (ENSCJPG00005001847) ENSCJPG00005001841 #27 ENSCJPG00005001833 #27 HMGCR (ENSCJPG00005001819) #28 MED18 (ENSCJPG00005001817) CERT1 (ENSCJPG00005001805) #29 POLK (ENSCJPG00005001795) #30 ANKDD1B (ENSCJPG00005001790) #31 ENSCJPG00005001786 SV2C (ENSCJPG00005001780) #35 ENSCJPG00005001778 F2RL2 (ENSCJPG00005001776) #36 IQGAP2 (ENSCJPG00005001735) #37 F2R (ENSCJPG00005001719) ##36 Neognathae_b ANCESTRAL SPECIES 5 ENSGT00940000155389.c #9 ENSGT00940000155389.d.a #9 ENSGT00940000157105.n.b #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.a #15 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b.k #29 ENSGT00390000003312 ENSGT00940000155123.b.l.a #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Neognathae_c ANCESTRAL SPECIES 2 ENSGT00940000155389.c #9 ENSGT00940000155389.d.a #9 ENSGT00940000157105.n.b #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.a ##15 ENSGT00940000161645.a ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00390000003312 ENSGT00940000155123.b.l.a #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Golden eagle MODERN SPECIES 91 MRPS27 (ENSACCG00020016774) PTCD2 (ENSACCG00020016781) ZNF366 (ENSACCG00020016792) #7 TNPO1 (ENSACCG00020016800) #9 FCHO2 (ENSACCG00020016814) #11 TMEM171 (ENSACCG00020016822) #12 TMEM174 (ENSACCG00020016823) #13 FOXD1 (ENSACCG00020016825) ENSACCG00020016826 ##15 ANKRA2 (ENSACCG00020016827) #16 UTP15 (ENSACCG00020016831) #17 ARHGEF28 (ENSACCG00020016836) #18 ENC1 (ENSACCG00020016841) #19 HEXB (ENSACCG00020010543) #20 GFM2 (ENSACCG00020010560) #21 NSA2 (ENSACCG00020010586) #22 FAM169A (ENSACCG00020010593) #24 GCNT4 (ENSACCG00020010610) ENSACCG00020010622 #27 HMGCR (ENSACCG00020010636) #28 MED18 (ENSACCG00020010650) CERT1 (ENSACCG00020010683) #29 POLK (ENSACCG00020010794) #30 ANKDD1B (ENSACCG00020010842) #31 ENSACCG00020010857 SV2C (ENSACCG00020010876) #35 IQGAP2 (ENSACCG00020010944) #37 F2RL2 (ENSACCG00020011007) #36 F2R (ENSACCG00020011014) ##36 F2RL1 (ENSACCG00020011018) ##36 S100Z (ENSACCG00020011028) Kakapo MODERN SPECIES 19 PTCD2 (ENSSHBG00005020628) ENSSHBG00005020631 #7 ENSSHBG00005020632 #9 ENSSHBG00005020635 #9 ENSSHBG00005020644 #11 TMEM171 (ENSSHBG00005020656) #12 TMEM174 (ENSSHBG00005020659) #13 ENSSHBG00005020665 ENSSHBG00005020666 ##15 ANKRA2 (ENSSHBG00005020673) #16 UTP15 (ENSSHBG00005020682) #17 ARHGEF28 (ENSSHBG00005020695) #18 ENC1 (ENSSHBG00005020707) #19 HEXB (ENSSHBG00005020711) #20 GFM2 (ENSSHBG00005020784) #21 NSA2 (ENSSHBG00005021010) #22 ENSSHBG00005021012 #24 GCNT4 (ENSSHBG00005000099) ENSSHBG00005000109 #27 HMGCR (ENSSHBG00005000137) #28 MED18 (ENSSHBG00005000150) ENSSHBG00005010064 #29 POLK (ENSSHBG00005010150) #30 ANKDD1B (ENSSHBG00005010251) #31 ENSSHBG00005010286 SV2C (ENSSHBG00005010367) #35 IQGAP2 (ENSSHBG00005010448) #37 F2RL2 (ENSSHBG00005010691) #36 F2R (ENSSHBG00005010723) ##36 F2RL1 (ENSSHBG00005010738) ##36 S100Z (ENSSHBG00005010751) Passeriformes ANCESTRAL SPECIES 7 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389.d.a #9 ENSGT00940000157105.n.b #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b.k #29 ENSGT00390000003312 ENSGT00940000155123.b.l.a #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Great tit MODERN SPECIES 642 MAP1B (ENSPMJG00000016186) MRPS27 (ENSPMJG00000016185) ZNF366 (ENSPMJG00000016182) #7 TNPO1 (ENSPMJG00000016180) #9 FCHO2 (ENSPMJG00000016179) #11 TMEM171 (ENSPMJG00000016177) #12 TMEM174 (ENSPMJG00000016176) #13 ENSPMJG00000016175 ENSPMJG00000016174 ##15 ANKRA2 (ENSPMJG00000016172) #16 UTP15 (ENSPMJG00000016171) #17 ARHGEF28 (ENSPMJG00000016170) #18 ENC1 (ENSPMJG00000016167) #19 HEXB (ENSPMJG00000016166) #20 GFM2 (ENSPMJG00000016165) #21 NSA2 (ENSPMJG00000016164) #22 FAM169A (ENSPMJG00000016163) #24 GCNT4 (ENSPMJG00000016162) ENSPMJG00000016161 #27 HMGCR (ENSPMJG00000016159) #28 MED18 (ENSPMJG00000016158) CERT1 (ENSPMJG00000016157) #29 ENSPMJG00000016156 POLK (ENSPMJG00000016155) #30 ENSPMJG00000016154 SV2C (ENSPMJG00000016153) #35 F2RL2 (ENSPMJG00000016152) #36 IQGAP2 (ENSPMJG00000016151) #37 F2R (ENSPMJG00000016150) ##36 F2RL1 (ENSPMJG00000016149) ##36 S100Z (ENSPMJG00000016148) Passeriformes_d ANCESTRAL SPECIES 6 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389.d.a #9 ENSGT00940000157105.n.b #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b.k #29 ENSGT00390000003312 ENSGT00940000155123.b.l.a #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Flycatcher MODERN SPECIES 561 ENSFALG00000010312 MRPS27 (ENSFALG00000010306) PTCD2 (ENSFALG00000010299) ZNF366 (ENSFALG00000010297) #7 TNPO1 (ENSFALG00000010292) #9 TMEM174 (ENSFALG00000010257) #11 ENSFALG00000021806 BTF3 (ENSFALG00000010233) #15 ANKRA2 (ENSFALG00000010222) #16 UTP15 (ENSFALG00000010206) #17 ENSFALG00000025640 ARHGEF28 (ENSFALG00000010196) #18 ENC1 (ENSFALG00000014583) #19 HEXB (ENSFALG00000010162) #20 GFM2 (ENSFALG00000010106) #21 NSA2 (ENSFALG00000010090) #22 FAM169A (ENSFALG00000027800) #24 ENSFALG00000026352 GCNT4 (ENSFALG00000014564) ENSFALG00000028313 HMGCR (ENSFALG00000010078) #28 ENSFALG00000014553 CERT1 (ENSFALG00000010073) #29 POLK (ENSFALG00000010061) #30 ENSFALG00000010043 SV2C (ENSFALG00000010041) #35 F2RL2 (ENSFALG00000026321) #36 IQGAP2 (ENSFALG00000010034) #37 F2R (ENSFALG00000010030) ##36 F2RL1 (ENSFALG00000014541) ##36 S100Z (ENSFALG00000028933) Passeriformes_g ANCESTRAL SPECIES 7 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389.d.a #9 ENSGT00940000157105.n.b #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b.k #29 ENSGT00390000003312 ENSGT00940000155123.b.l.a #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Passeroidea ANCESTRAL SPECIES 23 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389.d.a #9 ENSGT00940000157105.n.b #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b.k #29 ENSGT00390000003312 ENSGT00940000155123.b.l.a #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Zebra finch MODERN SPECIES 104 MRPS27 (ENSTGUG00000005691) PTCD2 (ENSTGUG00000005705) ZNF366 (ENSTGUG00000005717) #7 TNPO1 (ENSTGUG00000005729) #9 FCHO2 (ENSTGUG00000005780) #11 TMEM171 (ENSTGUG00000005840) #12 TMEM174 (ENSTGUG00000005844) #13 ENSTGUG00000020640 BTF3 (ENSTGUG00000005853) #15 ANKRA2 (ENSTGUG00000005875) #16 UTP15 (ENSTGUG00000005903) #17 ARHGEF28 (ENSTGUG00000005929) #18 ENC1 (ENSTGUG00000005945) #19 HEXB (ENSTGUG00000005948) #20 GFM2 (ENSTGUG00000005985) #21 NSA2 (ENSTGUG00000006033) #22 FAM169A (ENSTGUG00000006055) #24 GCNT4 (ENSTGUG00000006072) ENSTGUG00000006074 #27 HMGCR (ENSTGUG00000006083) #28 MED18 (ENSTGUG00000006132) CERT1 (ENSTGUG00000006135) #29 POLK (ENSTGUG00000006177) #30 ENSTGUG00000024790 SV2C (ENSTGUG00000004114) #35 F2RL2 (ENSTGUG00000004113) #36 IQGAP2 (ENSTGUG00000004085) #37 ENSTGUG00000004076 CRHBP (ENSTGUG00000004054) AGGF1 (ENSTGUG00000004021) PDE8B (ENSTGUG00000003995) Common canary MODERN SPECIES 25 ENSSCAG00000004262 MRPS27 (ENSSCAG00000004269) PTCD2 (ENSSCAG00000004277) ZNF366 (ENSSCAG00000004281) #7 ENSSCAG00000004350 #9 FCHO2 (ENSSCAG00000004714) #11 TMEM171 (ENSSCAG00000004732) #12 TMEM174 (ENSSCAG00000004734) #13 BTF3 (ENSSCAG00000004740) #15 ANKRA2 (ENSSCAG00000004745) #16 UTP15 (ENSSCAG00000004749) #17 ENSSCAG00000004759 #18 ENC1 (ENSSCAG00000004767) #19 HEXB (ENSSCAG00000004782) #20 GFM2 (ENSSCAG00000004828) #21 NSA2 (ENSSCAG00000004842) #22 FAM169A (ENSSCAG00000004849) #24 ENSSCAG00000004859 GCNT4 (ENSSCAG00000004865) ENSSCAG00000004870 #27 HMGCR (ENSSCAG00000004885) #28 ENSSCAG00000004892 #29 POLK (ENSSCAG00000004901) #30 ANKDD1B (ENSSCAG00000004916) #31 ENSSCAG00000004934 SV2C (ENSSCAG00000004946) #35 IQGAP2 (ENSSCAG00000004970) #37 F2RL2 (ENSSCAG00000005003) #36 F2R (ENSSCAG00000005008) ##36 F2RL1 (ENSSCAG00000005013) ##36 S100Z (ENSSCAG00000005020) Medium ground finch MODERN SPECIES 179 ENSGFOG00000012500 #9 ENSGFOG00000012472 #11 TMEM171 (ENSGFOG00000012461) #12 TMEM174 (ENSGFOG00000012456) #13 ENSGFOG00000012453 ##15 ANKRA2 (ENSGFOG00000012448) #16 UTP15 (ENSGFOG00000012446) #17 ARHGEF28 (ENSGFOG00000012413) #18 ENC1 (ENSGFOG00000012406) #19 HEXB (ENSGFOG00000012399) #20 GFM2 (ENSGFOG00000012388) #21 NSA2 (ENSGFOG00000012384) #22 FAM169A (ENSGFOG00000012376) #24 GCNT4 (ENSGFOG00000012375) ENSGFOG00000012368 #27 HMGCR (ENSGFOG00000012366) #28 ENSGFOG00000012357 #29 ENSGFOG00000012353 #29 POLK (ENSGFOG00000012346) #30 ENSGFOG00000012340 African ostrich MODERN SPECIES 1070 ENSSCUG00000018918 MRPS27 (ENSSCUG00000018919) PTCD2 (ENSSCUG00000018920) ZNF366 (ENSSCUG00000018921) #7 TNPO1 (ENSSCUG00000018929) #9 FCHO2 (ENSSCUG00000018967) #11 TMEM171 (ENSSCUG00000018969) #12 TMEM174 (ENSSCUG00000018970) #13 ENSSCUG00000018972 ##15 ANKRA2 (ENSSCUG00000018973) #16 UTP15 (ENSSCUG00000018974) #17 ARHGEF28 (ENSSCUG00000018975) #18 ENC1 (ENSSCUG00000018980) #19 HEXB (ENSSCUG00000018982) #20 GFM2 (ENSSCUG00000018983) #21 NSA2 (ENSSCUG00000018985) #22 FAM169A (ENSSCUG00000018986) #24 GCNT4 (ENSSCUG00000018988) ENSSCUG00000018991 #27 HMGCR (ENSSCUG00000018992) #28 MED18 (ENSSCUG00000018993) CERT1 (ENSSCUG00000018994) #29 POLK (ENSSCUG00000018995) #30 ENSSCUG00000018996 IQGAP2 (ENSSCUG00000012832) #37 F2RL2 (ENSSCUG00000012855) #36 F2R (ENSSCUG00000012856) ##36 F2RL1 (ENSSCUG00000012858) ##36 S100Z (ENSSCUG00000012861) CRHBP (ENSSCUG00000012866) AGGF1 (ENSSCUG00000012874) Australian saltwater crocodile MODERN SPECIES 29 MCCC2 (ENSCPRG00005001043) MAP1B (ENSCPRG00005001004) MRPS27 (ENSCPRG00005000984) ENSCPRG00005000981 ZNF366 (ENSCPRG00005000971) #7 TNPO1 (ENSCPRG00005000944) #9 FCHO2 (ENSCPRG00005000902) #11 TMEM174 (ENSCPRG00005000891) #13 BTF3 (ENSCPRG00005000854) #15 ANKRA2 (ENSCPRG00005000842) #16 UTP15 (ENSCPRG00005000829) #17 ARHGEF28 (ENSCPRG00005000765) #18 ENC1 (ENSCPRG00005000693) #19 HEXB (ENSCPRG00005000670) #20 GFM2 (ENSCPRG00005000644) #21 NSA2 (ENSCPRG00005000620) #22 FAM169A (ENSCPRG00005000616) #24 GCNT4 (ENSCPRG00005000608) ENSCPRG00005000598 HMGCR (ENSCPRG00005000561) #28 MED18 (ENSCPRG00005000551) CERT1 (ENSCPRG00005000523) #29 POLK (ENSCPRG00005000468) #30 ANKDD1B (ENSCPRG00005000445) #31 ENSCPRG00005000427 ENSCPRG00005000416 ENSCPRG00005000401 SV2C (ENSCPRG00005000334) #35 ENSCPRG00005000328 F2RL2 (ENSCPRG00005000293) #36 IQGAP2 (ENSCPRG00005000163) #37 Cryptodira ANCESTRAL SPECIES 9 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00390000003312 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Chinese turtle MODERN SPECIES 1168 PTCD2 (ENSPSIG00000014559) ZNF366 (ENSPSIG00000014530) #7 ENSPSIG00000000792 TNPO1 (ENSPSIG00000014366) #9 ENSPSIG00000014363 FCHO2 (ENSPSIG00000014245) #11 ENSPSIG00000000781 ENSPSIG00000014205 ##15 ANKRA2 (ENSPSIG00000014149) #16 UTP15 (ENSPSIG00000014028) #17 ARHGEF28 (ENSPSIG00000013632) #18 ENSPSIG00000013603 ENC1 (ENSPSIG00000013598) #19 HEXB (ENSPSIG00000013355) #20 GFM2 (ENSPSIG00000012954) #21 NSA2 (ENSPSIG00000012904) #22 FAM169A (ENSPSIG00000012898) #24 GCNT4 (ENSPSIG00000000770) ENSPSIG00000000759 ENSPSIG00000012890 HMGCR (ENSPSIG00000012607) #28 MED18 (ENSPSIG00000000751) CERT1 (ENSPSIG00000012346) #29 POLK (ENSPSIG00000012032) #30 ANKDD1B (ENSPSIG00000012019) #31 ENSPSIG00000012014 ENSPSIG00000000744 SV2C (ENSPSIG00000011736) #35 ENSPSIG00000011731 #37 HTR1F (ENSPSIG00000000738) ENSPSIG00000011720 Testudinoidea ANCESTRAL SPECIES 7 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00390000003312 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Emydidae ANCESTRAL SPECIES 7 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00390000003312 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00990000214262 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Three-toed box turtle MODERN SPECIES 29 PTCD2 (ENSTMTG00000011544) ZNF366 (ENSTMTG00000011536) #7 TNPO1 (ENSTMTG00000011504) #9 FCHO2 (ENSTMTG00000011315) #11 TMEM171 (ENSTMTG00000011285) #12 TMEM174 (ENSTMTG00000011269) #13 ENSTMTG00000011249 BTF3 (ENSTMTG00000011242) #15 ANKRA2 (ENSTMTG00000011213) #16 UTP15 (ENSTMTG00000011186) #17 ARHGEF28 (ENSTMTG00000011064) #18 ENC1 (ENSTMTG00000011046) #19 HEXB (ENSTMTG00000010977) #20 GFM2 (ENSTMTG00000010926) #21 ENSTMTG00000010905 NSA2 (ENSTMTG00000010889) #22 FAM169A (ENSTMTG00000010844) #24 GCNT4 (ENSTMTG00000010834) ENSTMTG00000010801 #27 HMGCR (ENSTMTG00000010742) #28 MED18 (ENSTMTG00000010732) CERT1 (ENSTMTG00000010650) #29 POLK (ENSTMTG00000010623) #30 ANKDD1B (ENSTMTG00000010565) #31 ENSTMTG00000010543 ENSTMTG00000010519 SV2C (ENSTMTG00000010477) #35 ENSTMTG00000010456 F2RL2 (ENSTMTG00000010445) #36 IQGAP2 (ENSTMTG00000010288) #37 F2R (ENSTMTG00000010274) ##36 painted turtle MODERN SPECIES 695 ENSCPBG00000000171 MRPS27 (ENSCPBG00000000195) PTCD2 (ENSCPBG00000000216) ZNF366 (ENSCPBG00000000234) #7 TNPO1 (ENSCPBG00000000260) #9 FCHO2 (ENSCPBG00000000328) #11 TMEM171 (ENSCPBG00000000427) #12 TMEM174 (ENSCPBG00000000441) #13 BTF3 (ENSCPBG00000000482) #15 ANKRA2 (ENSCPBG00000000509) #16 UTP15 (ENSCPBG00000000540) #17 ARHGEF28 (ENSCPBG00000000588) #18 ENC1 (ENSCPBG00000000702) #19 HEXB (ENSCPBG00000000708) #20 GFM2 (ENSCPBG00000000761) #21 NSA2 (ENSCPBG00000000845) #22 FAM169A (ENSCPBG00000000858) #24 GCNT4 (ENSCPBG00000000877) ENSCPBG00000000893 #27 HMGCR (ENSCPBG00000000934) #28 MED18 (ENSCPBG00000000959) CERT1 (ENSCPBG00000000976) #29 POLK (ENSCPBG00000001045) #30 ANKDD1B (ENSCPBG00000001071) #31 ENSCPBG00000001139 SV2C (ENSCPBG00000001171) #35 ENSCPBG00000001231 #37 F2RL2 (ENSCPBG00000001709) #36 ENSCPBG00000001716 #37 F2R (ENSCPBG00000001721) ##36 F2RL1 (ENSCPBG00000001729) ##36 Testudinidae ANCESTRAL SPECIES 15 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.a ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00390000003312 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Abingdon island giant tortoise MODERN SPECIES 2435 ENSCABG00000015134 #18 ENSCABG00000015132 #18 ENC1 (ENSCABG00000015129) #19 HEXB (ENSCABG00000015106) #20 GFM2 (ENSCABG00000014375) #21 NSA2 (ENSCABG00000014331) #22 FAM169A (ENSCABG00000014330) #24 Goode s thornscrub tortoise MODERN SPECIES 20 ZNF366 (ENSGEVG00005001887) #7 TNPO1 (ENSGEVG00005001947) #9 FCHO2 (ENSGEVG00005002134) #11 ENSGEVG00005002151 #11 TMEM171 (ENSGEVG00005002168) #12 ENSGEVG00005002183 ENSGEVG00005002195 ENSGEVG00005002220 ##15 ANKRA2 (ENSGEVG00005002251) #16 UTP15 (ENSGEVG00005002312) #17 ENSGEVG00005002370 #18 ENSGEVG00005002401 #18 ENC1 (ENSGEVG00005002422) #19 HEXB (ENSGEVG00005002443) #20 GFM2 (ENSGEVG00005002461) #21 NSA2 (ENSGEVG00005002481) #22 FAM169A (ENSGEVG00005002497) #24 GCNT4 (ENSGEVG00005002526) ENSGEVG00005002534 #27 HMGCR (ENSGEVG00005002550) #28 MED18 (ENSGEVG00005002570) CERT1 (ENSGEVG00005002596) #29 POLK (ENSGEVG00005002673) #30 ANKDD1B (ENSGEVG00005002744) #31 ENSGEVG00005002779 SV2C (ENSGEVG00005002796) #35 ENSGEVG00005002861 IQGAP2 (ENSGEVG00005004397) #37 F2RL2 (ENSGEVG00005017004) #36 F2R (ENSGEVG00005017019) ##36 F2RL1 (ENSGEVG00005017035) ##36 Lepidosauria ANCESTRAL SPECIES 1 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 tuatara MODERN SPECIES 537 ENSSPUG00000018630 BTF3 (ENSSPUG00000000033) #15 ANKRA2 (ENSSPUG00000000057) #16 UTP15 (ENSSPUG00000000063) #17 ENSSPUG00000000112 #18 ENSSPUG00000000157 #18 ENSSPUG00000000193 ENC1 (ENSSPUG00000000224) #19 HEXB (ENSSPUG00000000285) #20 GFM2 (ENSSPUG00000000593) #21 NSA2 (ENSSPUG00000000619) #22 FAM169A (ENSSPUG00000000635) #24 Episquamata ANCESTRAL SPECIES 6 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b.i ##36 ENSGT01050000244840.A.a.b.j ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Toxicofera ANCESTRAL SPECIES 6 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b.i ##36 ENSGT01050000244840.A.a.b.j ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Elapidae ANCESTRAL SPECIES 7 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105.z #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667.g #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b.i ##36 ENSGT01050000244840.A.a.b.j ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Elapidae_a ANCESTRAL SPECIES 9 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105.z #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667.g #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b.i ##36 ENSGT01050000244840.A.a.b.j ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Acanthophiinae ANCESTRAL SPECIES 9 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105.z #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667.g #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b.i ##36 ENSGT01050000244840.A.a.b.j ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Mainland tiger snake MODERN SPECIES 33 PTCD2 (ENSNSUG00000011058) ZNF366 (ENSNSUG00000011054) #7 ENSNSUG00000011053 TNPO1 (ENSNSUG00000011049) #9 FCHO2 (ENSNSUG00000010944) #11 TMEM171 (ENSNSUG00000010943) #12 TMEM174 (ENSNSUG00000010942) #13 ENSNSUG00000010941 ENSNSUG00000010940 ##15 ANKRA2 (ENSNSUG00000010939) #16 UTP15 (ENSNSUG00000010848) #17 ARHGEF28 (ENSNSUG00000010843) #18 ENC1 (ENSNSUG00000010842) #19 HEXB (ENSNSUG00000010836) #20 GFM2 (ENSNSUG00000010550) #21 NSA2 (ENSNSUG00000010546) #22 FAM169A (ENSNSUG00000010538) #24 GCNT4 (ENSNSUG00000010536) HMGCR (ENSNSUG00000010526) #28 CERT1 (ENSNSUG00000010520) #29 POLK (ENSNSUG00000010513) #30 ANKDD1B (ENSNSUG00000010511) #31 ENSNSUG00000010508 SV2C (ENSNSUG00000010481) #35 F2RL2 (ENSNSUG00000010480) #36 IQGAP2 (ENSNSUG00000008168) #37 ENSNSUG00000008166 ##36 ENSNSUG00000008165 ##36 F2RL1 (ENSNSUG00000008164) ##36 S100Z (ENSNSUG00000008153) CRHBP (ENSNSUG00000008150) Eastern brown snake MODERN SPECIES 2 PTCD2 (ENSPTXG00000002732) ZNF366 (ENSPTXG00000002730) #7 TNPO1 (ENSPTXG00000002724) #9 FCHO2 (ENSPTXG00000002719) #11 TMEM171 (ENSPTXG00000002716) #12 TMEM174 (ENSPTXG00000002714) #13 ENSPTXG00000002710 BTF3 (ENSPTXG00000002708) #15 ANKRA2 (ENSPTXG00000002706) #16 UTP15 (ENSPTXG00000002705) #17 ARHGEF28 (ENSPTXG00000002703) #18 ENSPTXG00000002702 ENC1 (ENSPTXG00000002701) #19 HEXB (ENSPTXG00000002700) #20 GFM2 (ENSPTXG00000002694) #21 NSA2 (ENSPTXG00000002688) #22 FAM169A (ENSPTXG00000002682) #24 GCNT4 (ENSPTXG00000002679) HMGCR (ENSPTXG00000002673) #28 CERT1 (ENSPTXG00000002617) #29 POLK (ENSPTXG00000002608) #30 ANKDD1B (ENSPTXG00000002606) #31 ENSPTXG00000002603 SV2C (ENSPTXG00000002599) #35 F2RL2 (ENSPTXG00000002598) #36 IQGAP2 (ENSPTXG00000002592) #37 ENSPTXG00000002587 ##36 ENSPTXG00000002586 ##36 F2RL1 (ENSPTXG00000002584) ##36 S100Z (ENSPTXG00000002582) CRHBP (ENSPTXG00000002580) Blue-lipped sea krait MODERN SPECIES 957 WARS2 (ENSLLTG00000016125) NSA2 (ENSLLTG00000016127) #22 FAM169A (ENSLLTG00000016129) #24 GCNT4 (ENSLLTG00000016138) Indian cobra MODERN SPECIES 1 ENSNNAG00000002980 MRPS27 (ENSNNAG00000002984) ZNF366 (ENSNNAG00000003003) #7 TNPO1 (ENSNNAG00000003034) #9 FCHO2 (ENSNNAG00000003124) #11 TMEM171 (ENSNNAG00000003320) #12 ENSNNAG00000003326 #13 ENSNNAG00000003340 #13 ENSNNAG00000003352 ##15 ANKRA2 (ENSNNAG00000003357) #16 UTP15 (ENSNNAG00000003368) #17 ENSNNAG00000003383 #18 ENC1 (ENSNNAG00000003390) #19 HEXB (ENSNNAG00000003401) #20 GFM2 (ENSNNAG00000003664) #21 NSA2 (ENSNNAG00000006166) #22 FAM169A (ENSNNAG00000006185) #24 GCNT4 (ENSNNAG00000006323) HMGCR (ENSNNAG00000006352) #28 CERT1 (ENSNNAG00000006429) #29 POLK (ENSNNAG00000006564) #30 ANKDD1B (ENSNNAG00000006589) #31 ENSNNAG00000006634 SV2C (ENSNNAG00000006660) #35 ENSNNAG00000006703 ##37 ENSNNAG00000006718 F2RL2 (ENSNNAG00000006742) #36 IQGAP2 (ENSNNAG00000006766) #37 ENSNNAG00000003737 ##36 ENSNNAG00000003747 ##36 F2RL1 (ENSNNAG00000003782) ##36 Lizard MODERN SPECIES 1 ENSACAG00000044627 TNPO1 (ENSACAG00000009599) #9 FCHO2 (ENSACAG00000009572) #11 TMEM171 (ENSACAG00000009564) #12 TMEM174 (ENSACAG00000009559) #13 ENSACAG00000037329 ENSACAG00000027419 btf3 (ENSACAG00000037897) ##15 ANKRA2 (ENSACAG00000009434) #16 UTP15 (ENSACAG00000009351) #17 ENSACAG00000038995 ARHGEF28 (ENSACAG00000009305) #18 ENC1 (ENSACAG00000009297) #19 HEXB (ENSACAG00000009147) #20 GFM2 (ENSACAG00000009011) #21 NSA2 (ENSACAG00000037978) #22 FAM169A (ENSACAG00000008952) #24 GCNT4 (ENSACAG00000008942) ENSACAG00000038096 ENSACAG00000041697 HMGCR (ENSACAG00000008698) #28 CERT1 (ENSACAG00000008556) #29 POLK (ENSACAG00000008458) #30 ANKDD1B (ENSACAG00000008414) #31 ENSACAG00000022708 ENSACAG00000008393 SV2C (ENSACAG00000008315) #35 ENSACAG00000043111 ENSACAG00000035710 ENSACAG00000041042 F2RL2 (ENSACAG00000008312) #36 Laterata ANCESTRAL SPECIES 8 ENSGT00390000007246.e ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.b #37 ENSGT01050000244840.A.a.b.i ##36 ENSGT01050000244840.A.a.b.j ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 Argentine black and white tegu MODERN SPECIES 10 PTCD2 (ENSSMRG00000006292) ZNF366 (ENSSMRG00000006270) #7 TNPO1 (ENSSMRG00000006233) #9 FCHO2 (ENSSMRG00000006209) #11 TMEM171 (ENSSMRG00000006163) #12 TMEM174 (ENSSMRG00000006149) #13 ENSSMRG00000006114 ENSSMRG00000006113 ##15 ANKRA2 (ENSSMRG00000006106) #16 UTP15 (ENSSMRG00000006104) #17 ARHGEF28 (ENSSMRG00000006038) #18 ENSSMRG00000006022 ENC1 (ENSSMRG00000005874) #19 HEXB (ENSSMRG00000005873) #20 GFM2 (ENSSMRG00000005872) #21 NSA2 (ENSSMRG00000005871) #22 FAM169A (ENSSMRG00000005843) #24 GCNT4 (ENSSMRG00000005771) ENSSMRG00000005770 #27 HMGCR (ENSSMRG00000004085) #28 CERT1 (ENSSMRG00000004058) #29 POLK (ENSSMRG00000004038) #30 ANKDD1B (ENSSMRG00000004024) #31 ENSSMRG00000004013 SV2C (ENSSMRG00000003152) #35 F2RL2 (ENSSMRG00000003145) #36 IQGAP2 (ENSSMRG00000003117) #37 ENSSMRG00000003045 ##36 ENSSMRG00000003039 ##36 ENSSMRG00000003030 ##36 ENSSMRG00000003024 ##36 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 2 ENSPMRG00000010912 PTCD2 (ENSPMRG00000010904) ZNF366 (ENSPMRG00000010901) #7 TNPO1 (ENSPMRG00000010485) #9 ENSPMRG00000010355 #11 ENSPMRG00000010322 #11 TMEM171 (ENSPMRG00000010301) #12 ENSPMRG00000010296 ENSPMRG00000017709 ##15 ANKRA2 (ENSPMRG00000017697) #16 UTP15 (ENSPMRG00000017591) #17 ARHGEF28 (ENSPMRG00000017245) #18 ENSPMRG00000017193 ENC1 (ENSPMRG00000017190) #19 HEXB (ENSPMRG00000017184) #20 NSA2 (ENSPMRG00000017172) #22 GFM2 (ENSPMRG00000017136) #21 ENSPMRG00000017122 #22 FAM169A (ENSPMRG00000017115) #24 ENSPMRG00000017111 GCNT4 (ENSPMRG00000017109) HMGCR (ENSPMRG00000017104) #28 CERT1 (ENSPMRG00000017088) #29 ENSPMRG00000017083 POLK (ENSPMRG00000017080) #30 ANKDD1B (ENSPMRG00000017071) #31 ENSPMRG00000017062 SV2C (ENSPMRG00000017039) #35 F2RL2 (ENSPMRG00000017024) #36 IQGAP2 (ENSPMRG00000016986) #37 ENSPMRG00000016977 Common wall lizard MODERN SPECIES 13 ENSPMRG00000004082 WDFY4 (ENSPMRG00000004112) LRRC18 (ENSPMRG00000004213) VSTM4 (ENSPMRG00000004221) C10orf71 (ENSPMRG00000004236) DRGX (ENSPMRG00000004248) ERCC6 (ENSPMRG00000004297) CXCL12 (ENSPMRG00000004381) TMEM72 (ENSPMRG00000004388) PAOX (ENSPMRG00000004394) MTG1 (ENSPMRG00000004401) ENSPMRG00000004405 CHUK (ENSPMRG00000004413) ENSPMRG00000004437 COG3 (ENSPMRG00000004446) ENSPMRG00000004694 #22 PDLIM1 (ENSPMRG00000004699) HELLS (ENSPMRG00000004712) ENSPMRG00000004725 BLOC1S2 (ENSPMRG00000004731) ENSPMRG00000004737 PKD2L1 (ENSPMRG00000004742) SCD (ENSPMRG00000004749) WNT8B (ENSPMRG00000000205) NDUFB8 (ENSPMRG00000000239) ENSPMRG00000000259 HIF1AN (ENSPMRG00000000282) PAX2 (ENSPMRG00000000343) CUEDC2 (ENSPMRG00000000422) FBXL15 (ENSPMRG00000000450) ENSPMRG00000000472 Common wall lizard DUPLICATION Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 388 ENSPMRG00000018855 #22 Common wall lizard MODERN SPECIES 2 ZNF366 (ENSPMRG00000010901) #7 TNPO1 (ENSPMRG00000010485) #9 ENSPMRG00000010355 #11 ENSPMRG00000010322 #11 TMEM171 (ENSPMRG00000010301) #12 ENSPMRG00000010296 ENSPMRG00000017709 ##15 ANKRA2 (ENSPMRG00000017697) #16 UTP15 (ENSPMRG00000017591) #17 ARHGEF28 (ENSPMRG00000017245) #18 ENSPMRG00000017193 ENC1 (ENSPMRG00000017190) #19 HEXB (ENSPMRG00000017184) #20 NSA2 (ENSPMRG00000017172) #22 GFM2 (ENSPMRG00000017136) #21 ENSPMRG00000017122 #22 FAM169A (ENSPMRG00000017115) #24 ENSPMRG00000017111 GCNT4 (ENSPMRG00000017109) HMGCR (ENSPMRG00000017104) #28 CERT1 (ENSPMRG00000017088) #29 ENSPMRG00000017083 POLK (ENSPMRG00000017080) #30 ANKDD1B (ENSPMRG00000017071) #31 ENSPMRG00000017062 SV2C (ENSPMRG00000017039) #35 F2RL2 (ENSPMRG00000017024) #36 IQGAP2 (ENSPMRG00000016986) #37 ENSPMRG00000016977 ENSPMRG00000016973 ##36 ENSPMRG00000016969 ##36 Common wall lizard MODERN SPECIES 401 ENSPMRG00000018902 #22 Anura ANCESTRAL SPECIES 9 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105.l #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.a.a #15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000170332 ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00950000183076.b #37 ENSGT01050000244840.A.b.b #36 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 ENSGT00940000161125 ENSGT00390000001362 Frog MODERN SPECIES ptcd2 (ENSXETG00000031652) znf366 (ENSXETG00000033098) #7 tnpo1 (ENSXETG00000016812) #9 fcho2 (ENSXETG00000016815) #11 ENSXETG00000048604 tmem171 (ENSXETG00000026182) #12 tmem174.2 (ENSXETG00000037513) #13 foxd1 (ENSXETG00000035456) btf3 (ENSXETG00000016819) #15 ankra2 (ENSXETG00000016820) #16 utp15 (ENSXETG00000016821) #17 arhgef28 (ENSXETG00000016824) #18 enc1 (ENSXETG00000005074) #19 hexb (ENSXETG00000005075) #20 gfm2 (ENSXETG00000005076) #21 nsa2 (ENSXETG00000005077) #22 fam169a (ENSXETG00000031427) #24 gcnt4 (ENSXETG00000005081) ankrd31 (ENSXETG00000048346) hmgcr (ENSXETG00000005084) #28 cert1 (ENSXETG00000005085) #29 polk (ENSXETG00000005087) #30 ankdd1b (ENSXETG00000032144) #31 poc5 (ENSXETG00000003349) sv2c (ENSXETG00000030792) #35 iqgap2 (ENSXETG00000003339) #37 f2rl2 (ENSXETG00000003340) #36 f2r (ENSXETG00000003338) ##36 ENSXETG00000042651 f2rl1 (ENSXETG00000001420) ##36 ENSXETG00000043113 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES ENSLLEG00000001534 PTCH1 (ENSLLEG00000001683) ENSLLEG00000002102 FANCC (ENSLLEG00000002124) ENSLLEG00000002192 AOPEP (ENSLLEG00000002292) ENSLLEG00000002414 ENSLLEG00000002423 FBP1 (ENSLLEG00000002435) FBP2 (ENSLLEG00000002458) ENSLLEG00000002486 ENSLLEG00000002495 DAPK1 (ENSLLEG00000002535) ENSLLEG00000002602 ENSLLEG00000002632 ENSLLEG00000002646 #22 ENSLLEG00000002655 ENSLLEG00000002661 GAS1 (ENSLLEG00000002671) ENSLLEG00000002689 TUT7 (ENSLLEG00000002744) ENSLLEG00000002906 ENSLLEG00000002911 ISCA1 (ENSLLEG00000002923) ENSLLEG00000002938 ENSLLEG00000002947 ENSLLEG00000002963 NAA35 (ENSLLEG00000003069) AGTPBP1 (ENSLLEG00000003340) ENSLLEG00000003400 ENSLLEG00000003411 Leishan spiny toad MODERN SPECIES ENSLLEG00000026172 ENSLLEG00000026158 BTF3 (ENSLLEG00000026110) #15 ENSLLEG00000026067 ANKRA2 (ENSLLEG00000025987) #16 UTP15 (ENSLLEG00000025805) #17 ARHGEF28 (ENSLLEG00000025137) #18 ENSLLEG00000025082 ENSLLEG00000025057 ENSLLEG00000025038 ENSLLEG00000025020 ENSLLEG00000024997 ENC1 (ENSLLEG00000024952) #19 HEXB (ENSLLEG00000024534) #20 GFM2 (ENSLLEG00000024229) #21 ENSLLEG00000024018 #22 ENSLLEG00000023974 FAM169A (ENSLLEG00000023890) #24 GCNT4 (ENSLLEG00000023871) ENSLLEG00000023800 ENSLLEG00000023779 HMGCR (ENSLLEG00000023306) #28 CERT1 (ENSLLEG00000022716) #29 ENSLLEG00000022681 ENSLLEG00000022621 #30 ENSLLEG00000022551 #30 ANKDD1B (ENSLLEG00000022314) #31 ENSLLEG00000022196 ENSLLEG00000021871 ENSLLEG00000021842 ENSLLEG00000021825 Coelacanth MODERN SPECIES 2138 ENC1 (ENSLACG00000007645) #19 HEXB (ENSLACG00000005909) #20 GFM2 (ENSLACG00000004622) #21 NSA2 (ENSLACG00000004237) #22 FAM169A (ENSLACG00000002860) #24 Actinopterygii ANCESTRAL SPECIES 45 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000017024 #12 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00940000174521 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.a.b.a ##37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Neopterygii ANCESTRAL SPECIES 26 ENSGT00940000155897 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00940000174521 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.a.b.a ##37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a ##36 Osteoglossocephalai ANCESTRAL SPECIES 8 ENSGT00940000155897 ENSGT00390000007246 ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a #24 ENSGT00940000159721 ENSGT00940000162618 #27 ENSGT00940000154742.b ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00940000164571 ENSGT00950000182940.b.b #35 ENSGT00940000174521 ENSGT01050000244840.A.b.b #36 ENSGT00950000183076.a.b.a ##37 ENSGT01050000244840.A.a.b ##36 ENSGT01050000244840.A.a.a.h.a ##36 Osteoglossiformes ANCESTRAL SPECIES 39 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00390000009329 ENSGT00940000155498 #7 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b.d ##15 ENSGT00940000157156 #16 ENSGT00390000004228 #17 ENSGT00940000155831 #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00510000048902.a.g #24 ENSGT00940000159721.f ENSGT00940000155305 #28 ENSGT00940000155123.b #29 ENSGT00940000156667 #30 ENSGT00940000154170.A #31 ENSGT00950000182940.b.b.g #35 ENSGT00950000183076.a.b.a ##37 ENSGT01050000244840.A.a.b.g ##36 ENSGT01050000244840.A.a.a.h.b ##36 ENSGT00940000159952.a.a P. kingsleyae MODERN SPECIES 2 ENSPKIG00000019996 MAP1B (ENSPKIG00000019941) ptcd2 (ENSPKIG00000019896) ZNF366 (ENSPKIG00000019857) #7 TNPO1 (ENSPKIG00000019795) #9 fcho2 (ENSPKIG00000019676) #11 TMEM174 (ENSPKIG00000019625) #13 foxd1 (ENSPKIG00000019613) ENSPKIG00000019488 ##15 ankra2 (ENSPKIG00000019426) #16 utp15 (ENSPKIG00000019386) #17 ARHGEF28 (ENSPKIG00000019115) #18 ENC1 (ENSPKIG00000019024) #19 hexb (ENSPKIG00000018938) #20 gfm2 (ENSPKIG00000018878) #21 nsa2 (ENSPKIG00000018852) #22 FAM169A (ENSPKIG00000018819) #24 GCNT4 (ENSPKIG00000018802) hmgcra (ENSPKIG00000018702) #28 ENSPKIG00000018585 #29 ENSPKIG00000018516 ENSPKIG00000018484 SV2C (ENSPKIG00000018429) #35 F2RL2 (ENSPKIG00000018396) #36 F2R (ENSPKIG00000018365) ##36 f2rl1.2 (ENSPKIG00000018335) ##36 f2rl1.1 (ENSPKIG00000018318) ##36 f2rl1.1 (ENSPKIG00000018310) ##36 f2rl1.2 (ENSPKIG00000018301) ##36 ch25hl2 (ENSPKIG00000018280) ENSPKIG00000018266 Asian bonytongue MODERN SPECIES 21 ptger4b (ENSSFOG00015029378) MAP1B (ENSSFOG00015015263) ptcd2 (ENSSFOG00015031685) ZNF366 (ENSSFOG00015015427) #7 TNPO1 (ENSSFOG00015015448) #9 fcho2 (ENSSFOG00015015583) #11 TMEM174 (ENSSFOG00015015636) #13 foxd1 (ENSSFOG00015030211) BTF3 (ENSSFOG00015015647) ##15 ankra2 (ENSSFOG00015015678) #16 utp15 (ENSSFOG00015015712) #17 ARHGEF28 (ENSSFOG00015015817) #18 ENC1 (ENSSFOG00015025627) #19 hexb (ENSSFOG00015015989) #20 gfm2 (ENSSFOG00015016059) #21 nsa2 (ENSSFOG00015016191) #22 fam169aa (ENSSFOG00015016217) #24 GCNT4 (ENSSFOG00015016238) hmgcra (ENSSFOG00015016250) #28 ENSSFOG00015016294 #29 ENSSFOG00015016366 SV2C (ENSSFOG00015016383) #35 F2RL2 (ENSSFOG00015029501) #36 F2R (ENSSFOG00015028768) ##36 f2rl1.1 (ENSSFOG00015016419) ##36 ch25hl2 (ENSSFOG00015028366) ENSSFOG00015016427 s100z (ENSSFOG00015016441) crhbp (ENSSFOG00015016445) aggf1 (ENSSFOG00015016459) PDE8B (ENSSFOG00015016473) Clupeocephala ANCESTRAL SPECIES 307 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890 #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a Euteleosteomorpha ANCESTRAL SPECIES 152 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00390000017382 ENSGT00390000014118 ENSGT00940000156959.A ENSGT00940000159211.C ENSGT00950000183047.d.e ENSGT00940000159607 ENSGT00390000000529 ENSGT00390000009329 ENSGT00940000155897 ENSGT01050000244902.a.a.a.a.a.a ENSGT00390000017462 Protacanthopterygii ANCESTRAL SPECIES 17 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.f.b #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00390000017382.r ENSGT00390000014118 ENSGT00940000156959.A ENSGT00940000159211.C ENSGT00950000183047.d.e ENSGT00940000159607 ENSGT00390000000529.k ENSGT00390000009329 ENSGT00940000155897 ENSGT01050000244902.a.a.a.a.a.a ENSGT00390000017462 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 118 ENSGT00940000154821.a.a.e.b ENSGT01070000253744.b.b.f.a ENSGT00940000156290.b.c ENSGT00940000157321.e.b ENSGT01050000244898.b.b.a ENSGT00940000155389.x #9 ENSGT00940000157105.d.a #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b.c ENSGT00940000153288.a.b.b ##15 ENSGT00940000157156.r #16 ENSGT00940000155831.cb.c #18 ENSGT00950000182983.B.a.b.f.b.b #19 ENSGT00390000008107.c.a.g #20 ENSGT00550000074890.f #21 ENSGT00390000018706.a #22 ENSGT00950000182888.a.a.a.c.a.b ENSGT00950000182888.a.a.a.c.a.a ENSGT00940000160015.d ENSGT00390000008726.h.a.f ENSGT00390000006452.b.a.d ENSGT00390000017382.r.b ENSGT00390000014118.h ENSGT00940000156959.A.k.a ENSGT00940000159211.C.nb.a.b ENSGT00940000154535.D.wb ENSGT00950000183047.d.e.a ENSGT00940000159607.o ENSGT00390000000529.l ENSGT00390000009329.f Huchen MODERN SPECIES 16 dck (ENSHHUG00000001529) MOB1B (ENSHHUG00000001436) TNPO1 (ENSHHUG00000001188) #9 fcho2 (ENSHHUG00000001010) #11 foxd1 (ENSHHUG00000000981) ENSHHUG00000000918 ##15 ankra2 (ENSHHUG00000000897) #16 ENSHHUG00000000891 #18 ENSHHUG00000000879 ENSHHUG00000000869 ENSHHUG00000000864 #18 ENSHHUG00000000830 #18 ENC1 (ENSHHUG00000000825) #19 hexb (ENSHHUG00000000465) #20 gfm2 (ENSHHUG00000000422) #21 nsa2 (ENSHHUG00000000140) #22 tor1 (ENSHHUG00000000116) tor1 (ENSHHUG00000000078) egfl7 (ENSHHUG00000000060) agpat2 (ENSHHUG00000000052) dipk1b (ENSHHUG00000000009) mrps2 (ENSHHUG00000043489) ppp1r26 (ENSHHUG00000043476) ENSHHUG00000043473 Salmoninae_a ANCESTRAL SPECIES 80 ENSGT00940000154821.a.a.e.b ENSGT01070000253744.b.b.f.a ENSGT00940000156290.b.c ENSGT00940000157321.e.b ENSGT01050000244898.b.b.a ENSGT00940000155389.x #9 ENSGT00940000157105.d.a #11 ENSGT00390000004161.g #13 ENSGT00940000157140.b.a.b.b.c ENSGT00940000153288.a.b.b ##15 ENSGT00940000157156.r #16 ENSGT00940000155831.cb.c #18 ENSGT00950000182983.B.a.b.f.b.b #19 ENSGT00390000008107.c.a.g #20 ENSGT00550000074890.f #21 ENSGT00390000018706.a #22 ENSGT00950000182888.a.a.a.c.a.b.b.a ENSGT00940000160015.d ENSGT00390000008726.h.a.f ENSGT00390000006452.b.a.d ENSGT00390000017382.r.b ENSGT00390000014118.h ENSGT00940000156959.A.k.a ENSGT00940000159211.C.nb.a.b ENSGT00950000183047.d.e.a ENSGT00940000159607.o ENSGT00390000000529.l ENSGT00390000009329.f ENSGT00940000155897.qb.b ENSGT01050000244902.a.a.a.a.a.a.d ENSGT00390000017462.e Salmo ANCESTRAL SPECIES 1 ENSGT00940000154821.a.a.e.b ENSGT01070000253744.b.b.f.a ENSGT00940000156290.b.c ENSGT00940000157321.e.b ENSGT01050000244898.b.b.a ENSGT00940000155389.x #9 ENSGT00940000157105.d.a #11 ENSGT00390000004161.g #13 ENSGT00940000157140.b.a.b.b.c ENSGT00940000153288.b.g ##15 ENSGT00940000157156.r #16 ENSGT00940000155831.cb.c #18 ENSGT00950000182983.B.a.b.f.b.b #19 ENSGT00390000008107.c.a.g #20 ENSGT00550000074890.f #21 ENSGT00390000018706.a #22 ENSGT00950000182888.a.a.a.c.a.b.b.a ENSGT00940000160015.d ENSGT00390000008726.h.a.f ENSGT00390000006452.b.a.d ENSGT00390000017382.r.b ENSGT00390000014118.h ENSGT00940000156959.A.k.a ENSGT00940000159211.C.nb.a.b ENSGT00940000154535.D.wb ENSGT00950000183047.d.e.a ENSGT00940000159607.o ENSGT00390000000529.l ENSGT00390000009329.f ENSGT00940000155897.qb.b ENSGT00940000155897.rb Atlantic salmon MODERN SPECIES 2 NPFFR2 (ENSSSAG00000034609) SLC4A4 (ENSSSAG00000067184) DCK (ENSSSAG00000068041) MOB1B (ENSSSAG00000100755) TNPO1 (ENSSSAG00000068062) #9 fcho2 (ENSSSAG00000000898) #11 TMEM174 (ENSSSAG00000069497) #13 foxd1 (ENSSSAG00000102047) ENSSSAG00000069505 ##15 ankra2 (ENSSSAG00000088737) #16 ARHGEF28 (ENSSSAG00000069533) #18 ENSSSAG00000100343 ENC1 (ENSSSAG00000069539) #19 hexb (ENSSSAG00000069551) #20 gfm2 (ENSSSAG00000069717) #21 nsa2 (ENSSSAG00000069748) #22 ENSSSAG00000119406 ENSSSAG00000086552 ENSSSAG00000120318 ENSSSAG00000069765 egfl7 (ENSSSAG00000083641) agpat2 (ENSSSAG00000118986) fa69b (ENSSSAG00000069777) mrps2 (ENSSSAG00000069784) ppp1r26 (ENSSSAG00000069785) ENSSSAG00000069788 COL5A1 (ENSSSAG00000069796) ENSSSAG00000111910 ENSSSAG00000070034 rexo4 (ENSSSAG00000070286) ENSSSAG00000113133 River trout MODERN SPECIES 3 NPFFR2 (ENSSTUG00000015842) SLC4A4 (ENSSTUG00000016091) ENSSTUG00000019120 dck (ENSSTUG00000019125) MOB1B (ENSSTUG00000019143) TNPO1 (ENSSTUG00000019248) #9 fcho2 (ENSSTUG00000019513) #11 TMEM174 (ENSSTUG00000020301) #13 foxd1 (ENSSTUG00000020310) btf3 (ENSSTUG00000020316) ##15 ankra2 (ENSSTUG00000020344) #16 ARHGEF28 (ENSSTUG00000020358) #18 ENC1 (ENSSTUG00000020413) #19 hexb (ENSSTUG00000020445) #20 gfm2 (ENSSTUG00000020572) #21 nsa2 (ENSSTUG00000020756) #22 tor1 (ENSSTUG00000020809) egfl7 (ENSSTUG00000020894) agpat2 (ENSSTUG00000020935) dipk1b (ENSSTUG00000020945) ppp1r26 (ENSSTUG00000020988) ENSSTUG00000021009 ENSSTUG00000021061 FNBP1 (ENSSTUG00000021425) REXO4 (ENSSTUG00000021646) ENSSTUG00000021676 ptcd2 (ENSSTUG00000021696) MAP1B (ENSSTUG00000021748) ENSSTUG00000021757 ptger4b (ENSSTUG00000021762) ttc33 (ENSSTUG00000021767) Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00940000154821.a.a.e.b ENSGT01070000253744.b.b.f.a ENSGT00940000156290.b.c ENSGT00940000157321.e.b ENSGT01050000244898.b.b.a ENSGT00940000155389.x #9 ENSGT00940000157105.d.a #11 ENSGT00390000004161.g #13 ENSGT00940000157140.b.a.b.b.c ENSGT00940000153288.a.b.b ##15 ENSGT00940000157156.r #16 ENSGT00940000155831.cb.c #18 ENSGT00950000182983.B.a.b.f.b.b #19 ENSGT00390000008107.c.a.g #20 ENSGT00550000074890.f #21 ENSGT00390000018706.a #22 ENSGT00950000182888.a.a.a.c.a.a ENSGT00950000182888.a.a.a.c.a.b.b.a ENSGT00940000160015.d ENSGT00390000008726.h.a.f ENSGT00390000006452.b.a.d ENSGT00390000017382.r.b ENSGT00390000014118.h ENSGT00940000156959.A.k.a ENSGT00940000159211.C.nb.a.b ENSGT00950000183047.d.e.a ENSGT00940000159607.o ENSGT00390000000529.l ENSGT00390000009329.f ENSGT00940000155897.qb.b ENSGT01050000244902.a.a.a.a.a.a.d Oncorhynchus_a ANCESTRAL SPECIES 47 ENSGT00940000154821.a.a.e.b ENSGT01070000253744.b.b.f.a ENSGT00940000156290.b.c ENSGT00940000157321.e.b ENSGT01050000244898.b.b.a ENSGT00940000155389.x #9 ENSGT00940000157105.d.a #11 ENSGT00390000004161.g #13 ENSGT00940000157140.b.a.b.b.c ENSGT00940000153288.a.b.b ##15 ENSGT00940000157156.r #16 ENSGT00940000155831.cb.c #18 ENSGT00950000182983.B.a.b.f.b.b #19 ENSGT00390000008107.c.a.g #20 ENSGT00550000074890.f #21 ENSGT00390000018706.a #22 ENSGT00950000182888.a.a.a.c.a.b.b.a ENSGT00940000160015.d ENSGT00390000008726.h.a.f ENSGT00390000006452.b.a.d ENSGT00390000017382.r.b ENSGT00390000014118.h ENSGT00940000156959.A.k.a ENSGT00940000159211.C.nb.a.b ENSGT00950000183047.d.e.a ENSGT00940000159607.o ENSGT00390000000529.l ENSGT00390000009329.f ENSGT00940000155897.qb.b ENSGT01050000244902.a.a.a.a.a.a.d ENSGT00390000017462.e Chinook salmon MODERN SPECIES 26 zgc:122979 (ENSOTSG00005039767) ENSOTSG00005039766 NPFFR2 (ENSOTSG00005039750) SLC4A4 (ENSOTSG00005028448) dck (ENSOTSG00005028395) MOB1B (ENSOTSG00005028267) TNPO1 (ENSOTSG00005027517) #9 fcho2 (ENSOTSG00005024700) #11 TMEM174 (ENSOTSG00005024696) #13 foxd1 (ENSOTSG00005024694) btf3 (ENSOTSG00005024692) ##15 ankra2 (ENSOTSG00005024685) #16 ENC1 (ENSOTSG00005024682) #19 hexb (ENSOTSG00005024669) #20 gfm2 (ENSOTSG00005024651) #21 nsa2 (ENSOTSG00005024642) #22 tor1 (ENSOTSG00005024640) tor1 (ENSOTSG00005024638) egfl7 (ENSOTSG00005024636) agpat2 (ENSOTSG00005024635) dipk1b (ENSOTSG00005024632) mrps2 (ENSOTSG00005024628) ppp1r26 (ENSOTSG00005024627) ENSOTSG00005024626 COL5A1 (ENSOTSG00005024614) FNBP1 (ENSOTSG00005021974) REXO4 (ENSOTSG00005021972) CACFD1 (ENSOTSG00005021971) ptcd2 (ENSOTSG00005021970) ENSOTSG00005021969 ptger4b (ENSOTSG00005021968) Coho salmon MODERN SPECIES 21 ENSOKIG00005045527 ENSOKIG00005045517 NPFFR2 (ENSOKIG00005045515) SLC4A4 (ENSOKIG00005042034) MOB1B (ENSOKIG00005041667) TNPO1 (ENSOKIG00005040886) #9 fcho2 (ENSOKIG00005039380) #11 TMEM174 (ENSOKIG00005039194) #13 foxd1 (ENSOKIG00005039179) btf3 (ENSOKIG00005039137) ##15 ankra2 (ENSOKIG00005039104) #16 ARHGEF28 (ENSOKIG00005038932) #18 ENC1 (ENSOKIG00005038892) #19 hexb (ENSOKIG00005038659) #20 gfm2 (ENSOKIG00005038482) #21 nsa2 (ENSOKIG00005038405) #22 tor1 (ENSOKIG00005038359) egfl7 (ENSOKIG00005048982) agpat2 (ENSOKIG00005048980) dipk1b (ENSOKIG00005048977) mrps2 (ENSOKIG00005048968) ppp1r26 (ENSOKIG00005048967) ENSOKIG00005048963 ENSOKIG00005048951 ENSOKIG00005048841 FNBP1 (ENSOKIG00005048725) REXO4 (ENSOKIG00005048696) CACFD1 (ENSOKIG00005048688) ptcd2 (ENSOKIG00005048675) MAP1B (ENSOKIG00005048659) ENSOKIG00005048656 Rainbow trout MODERN SPECIES 364 NPFFR2 (ENSOMYG00000034453) SLC4A4 (ENSOMYG00000034651) DCK (ENSOMYG00000034882) MOB1B (ENSOMYG00000034906) TNPO1 (ENSOMYG00000035081) #9 FCHO2 (ENSOMYG00000069297) #11 ENSOMYG00000036506 #11 TMEM174 (ENSOMYG00000037558) #13 foxd1 (ENSOMYG00000037563) Btf3-1 (ENSOMYG00000037569) ##15 ankra2 (ENSOMYG00000037576) #16 ARHGEF28 (ENSOMYG00000037598) #18 ENC1 (ENSOMYG00000037623) #19 hexb (ENSOMYG00000037737) #20 gfm2 (ENSOMYG00000038309) #21 NSA2 (ENSOMYG00000041220) #22 ENSOMYG00000041224 ENSOMYG00000059822 egfl7 (ENSOMYG00000060932) agpat2 (ENSOMYG00000000532) dipk1b (ENSOMYG00000041249) mrps2 (ENSOMYG00000041260) ENSOMYG00000041262 ENSOMYG00000000586 ENSOMYG00000050453 ENSOMYG00000041268 ENSOMYG00000041271 ENSOMYG00000041279 ENSOMYG00000062293 ENSOMYG00000041338 ENSOMYG00000041343 Salmoninae ANCESTRAL SPECIES 1280 ENSGT00950000182983.B.a.b.f.b.a #19 ENSGT00390000008107.c.a.h #20 ENSGT00390000018706.b #22 Huchen MODERN SPECIES 3345 ENC1 (ENSHHUG00000020337) #19 hexb (ENSHHUG00000020282) #20 nsa2 (ENSHHUG00000020234) #22 Salmoninae_a ANCESTRAL SPECIES 7 ENSGT00940000154821.a.a.e.a ENSGT01070000253744.b.b.f.b ENSGT00940000156290.b.d ENSGT00940000157321.e.a ENSGT01050000244898.b.b.b ENSGT00940000155389.w #9 ENSGT00940000157105.d.b #11 ENSGT00950000182929.B.a.b.b ENSGT00390000004161.h #13 ENSGT00940000157140.b.a.b.b.d ENSGT00940000153288.b ##15 ENSGT00940000157156.q #16 ENSGT00940000155831.cb.d #18 ENSGT00950000182983.B.a.b.f.b.a #19 ENSGT00390000008107.c.a.h #20 ENSGT00390000018706.b #22 ENSGT00950000182888.a.a.a.d ENSGT00940000160015.c ENSGT00390000008726.h.a.e ENSGT00390000006452.b.a.c ENSGT00390000017382.r.a ENSGT00390000014118.g ENSGT00940000156959.A.k.b ENSGT00940000159211.C.nb.a.a ENSGT00950000183047.d.e.b ENSGT01040000240782.a.a ENSGT00940000159607.p ENSGT00390000000529.k ENSGT00390000009329.e ENSGT00940000155897.qb.a ENSGT01050000244902.a.a.a.a.a.a.c Salmo ANCESTRAL SPECIES ENSGT00940000154821.a.a.e.a ENSGT01070000253744.b.b.f.b ENSGT00940000156290.b.d ENSGT00940000157321.e.a ENSGT01050000244898.b.b.b ENSGT00940000155389.w #9 ENSGT00940000157105.d.b #11 ENSGT00950000182929.B.a.b.b ENSGT00390000004161.h #13 ENSGT00940000157140.b.a.b.b.d ENSGT00940000153288.b.h ##15 ENSGT00940000157156.q #16 ENSGT00940000155831.cb.d #18 ENSGT00950000182983.B.a.b.f.b.a #19 ENSGT00390000008107.c.a.h #20 ENSGT00390000018706.b #22 ENSGT00950000182888.a.a.a.d ENSGT00940000160015.c ENSGT00390000008726.h.a.e ENSGT00390000006452.b.a.c ENSGT00390000017382.r.a ENSGT00390000014118.g ENSGT01090000260029.a.a.a.a.a.a.b.b.a.a.d ENSGT00940000156959.A.k.b ENSGT00940000159211.C.nb.a.a ENSGT00950000183047.d.e.b ENSGT01040000240782.a.a ENSGT00940000159607.p ENSGT00390000000529.k ENSGT00390000009329.e ENSGT00940000155897.qb.a River trout MODERN SPECIES 15 ENSSTUG00000039096 NPFFR2 (ENSSTUG00000039090) SLC4A4 (ENSSTUG00000036695) dck (ENSSTUG00000036589) MOB1B (ENSSTUG00000036525) TNPO1 (ENSSTUG00000036279) #9 fcho2 (ENSSTUG00000036056) #11 apoa4a (ENSSTUG00000036042) TMEM174 (ENSSTUG00000036035) #13 foxd1 (ENSSTUG00000036032) btf3 (ENSSTUG00000036025) ##15 ankra2 (ENSSTUG00000036021) #16 ARHGEF28 (ENSSTUG00000035967) #18 ENC1 (ENSSTUG00000035953) #19 hexb (ENSSTUG00000035782) #20 nsa2 (ENSSTUG00000035751) #22 tor1 (ENSSTUG00000035735) egfl7 (ENSSTUG00000035670) agpat2 (ENSSTUG00000035662) dipk1b (ENSSTUG00000035651) mrps2 (ENSSTUG00000035638) ppp1r26 (ENSSTUG00000035633) ENSSTUG00000035601 COL5A1 (ENSSTUG00000035555) FNBP1 (ENSSTUG00000035432) ENSSTUG00000035409 ENSSTUG00000035403 ENSSTUG00000049754 CACFD1 (ENSSTUG00000049750) MAP1B (ENSSTUG00000049747) ptger4b (ENSSTUG00000049744) Atlantic salmon MODERN SPECIES mol1a (ENSSSAG00000001698) TNPO1 (ENSSSAG00000001451) #9 fcho2 (ENSSSAG00000092276) #11 ENSSSAG00000102395 TMEM174 (ENSSSAG00000000709) #13 foxd1 (ENSSSAG00000099692) ENSSSAG00000000689 ##15 ankra2 (ENSSSAG00000000631) #16 ENSSSAG00000084502 ENSSSAG00000084001 ENSSSAG00000100616 ARHGEF28 (ENSSSAG00000000544) #18 ENC1 (ENSSSAG00000079458) #19 hexb (ENSSSAG00000000265) #20 ENSSSAG00000079447 tinp1 (ENSSSAG00000111807) #22 ENSSSAG00000109208 dipk1b (ENSSSAG00000079431) mrps2 (ENSSSAG00000079426) ppp1r26 (ENSSSAG00000079421) ENSSSAG00000079417 ENSSSAG00000079410 COL5A1 (ENSSSAG00000079384) ENSSSAG00000078637 ENSSSAG00000078575 ENSSSAG00000078573 ptcd2 (ENSSSAG00000084732) ENSSSAG00000078562 ENSSSAG00000094409 ptger4b (ENSSSAG00000078561) ttc33 (ENSSSAG00000078559) Oncorhynchus ANCESTRAL SPECIES 19 ENSGT00940000154821.a.a.e.a ENSGT01070000253744.b.b.f.b ENSGT00940000156290.b.d ENSGT00940000157321.e.a ENSGT01050000244898.b.b.b ENSGT00940000155389.w #9 ENSGT00940000157105.d.b #11 ENSGT00950000182929.B.a.b.b ENSGT00390000004161.h #13 ENSGT00940000157140.b.a.b.b.d ENSGT00940000153288.b ##15 ENSGT00940000157156.q #16 ENSGT00940000155831.cb.d #18 ENSGT00950000182983.B.a.b.f.b.a #19 ENSGT00390000008107.c.a.h #20 ENSGT00390000018706.b #22 ENSGT00940000160015.c ENSGT00390000008726.h.a.e ENSGT00390000006452.b.a.c ENSGT00390000017382.r.a ENSGT00940000181901 ENSGT00940000156959.A.k.b ENSGT00940000159211.C.nb.a.a ENSGT00950000183047.d.e.b ENSGT01040000240782.a.a ENSGT00940000159607.p ENSGT00390000000529.k ENSGT00390000009329.e ENSGT00940000155897.qb.a ENSGT01050000244902.a.a.a.a.a.a.c ENSGT00390000017462.f Oncorhynchus_a ANCESTRAL SPECIES 12 ENSGT00940000154821.a.a.e.a ENSGT01070000253744.b.b.f.b ENSGT00940000156290.b.d ENSGT00940000157321.e.a ENSGT01050000244898.b.b.b ENSGT00940000155389.w #9 ENSGT00940000157105.d.b #11 ENSGT00950000182929.B.a.b.b ENSGT00390000004161.h #13 ENSGT00940000157140.b.a.b.b.d ENSGT00940000153288.b ##15 ENSGT00940000157156.q #16 ENSGT00940000155831.cb.d #18 ENSGT00950000182983.B.a.b.f.b.a #19 ENSGT00390000008107.c.a.h #20 ENSGT00390000018706.b #22 ENSGT00940000160015.c ENSGT00390000008726.h.a.e ENSGT00390000006452.b.a.c ENSGT00390000017382.r.a ENSGT00390000014118.g ENSGT01090000260029.a.a.a.a.a.a.b.b.a.a.d.c ENSGT00940000156959.A.k.b ENSGT00940000159211.C.nb.a.a ENSGT00950000183047.d.e.b ENSGT01040000240782.a.a ENSGT00940000159607.p ENSGT00390000000529.k ENSGT00390000009329.e ENSGT00940000155897.qb.a ENSGT01050000244902.a.a.a.a.a.a.c Coho salmon MODERN SPECIES 15 ENSOKIG00005034769 NPFFR2 (ENSOKIG00005034757) SLC4A4 (ENSOKIG00005034421) dck (ENSOKIG00005034369) MOB1B (ENSOKIG00005034307) TNPO1 (ENSOKIG00005034029) #9 fcho2 (ENSOKIG00005032346) #11 apoa4a (ENSOKIG00005032239) TMEM174 (ENSOKIG00005032225) #13 foxd1 (ENSOKIG00005032220) ENSOKIG00005032187 ##15 ankra2 (ENSOKIG00005032143) #16 ENC1 (ENSOKIG00005032125) #19 hexb (ENSOKIG00005031280) #20 ENSOKIG00005031219 NSA2 (ENSOKIG00005031206) #22 egfl7 (ENSOKIG00005031159) agpat2 (ENSOKIG00005031147) dipk1b (ENSOKIG00005031127) mrps2 (ENSOKIG00005031112) ppp1r26 (ENSOKIG00005031085) ENSOKIG00005031070 ENSOKIG00005031025 ENSOKIG00005030972 ENSOKIG00005030948 FNBP1 (ENSOKIG00005028971) ENSOKIG00005028856 ENSOKIG00005028838 CACFD1 (ENSOKIG00005028829) ENSOKIG00005028811 MAP1B (ENSOKIG00005028799) Chinook salmon MODERN SPECIES 12 ppp1r1c (ENSOTSG00005037418) neurod1 (ENSOTSG00005037420) ENSOTSG00005037421 znf385b (ENSOTSG00005037424) plekha3 (ENSOTSG00005037426) ankrd10a (ENSOTSG00005037430) CARS2 (ENSOTSG00005037450) rab20 (ENSOTSG00005040160) irs2a (ENSOTSG00005040162) lig4 (ENSOTSG00005040164) NALF1 (ENSOTSG00005040165) cckbra (ENSOTSG00005040166) ENSOTSG00005040188 ENC1 (ENSOTSG00005040189) #19 hexb (ENSOTSG00005040192) #20 nsa2 (ENSOTSG00005040274) #22 egfl7 (ENSOTSG00005040276) agpat2 (ENSOTSG00005040279) dipk1b (ENSOTSG00005040280) mrps2 (ENSOTSG00005040282) ppp1r26 (ENSOTSG00005040283) ENSOTSG00005040285 ENSOTSG00005040286 ENSOTSG00005040288 ENSOTSG00005040289 FNBP1 (ENSOTSG00005040294) ENSOTSG00005040699 ENSOTSG00005040703 CACFD1 (ENSOTSG00005040704) ptcd2 (ENSOTSG00005040705) ENSOTSG00005040706 Rainbow trout MODERN SPECIES 26 SLC4A4 (ENSOMYG00000040169) DCK (ENSOMYG00000041148) ENSOMYG00000070118 MOB1B (ENSOMYG00000041162) ENSOMYG00000041233 #9 fcho2 (ENSOMYG00000000122) #11 ENSOMYG00000000149 ENSOMYG00000059087 foxd1 (ENSOMYG00000000189) ENSOMYG00000000217 ##15 ankra2 (ENSOMYG00000000227) #16 ARHGEF28 (ENSOMYG00000000251) #18 ENSOMYG00000059901 ENC1 (ENSOMYG00000000268) #19 hexb (ENSOMYG00000000436) #20 NSA2 (ENSOMYG00000056747) #22 ENSOMYG00000071090 egfl7 (ENSOMYG00000000507) agpat2 (ENSOMYG00000041245) ENSOMYG00000065439 dipk1b (ENSOMYG00000000548) ENSOMYG00000064084 mrps2 (ENSOMYG00000000562) ENSOMYG00000000570 ENSOMYG00000060251 ENSOMYG00000000577 ENSOMYG00000041265 ENSOMYG00000057889 ENSOMYG00000048192 ENSOMYG00000048497 ENSOMYG00000051599 Northern pike MODERN SPECIES 13 ENSELUG00000000069 NPFFR2 (ENSELUG00000002622) SLC4A4 (ENSELUG00000002753) dck (ENSELUG00000002787) mob1ba (ENSELUG00000002806) TNPO1 (ENSELUG00000002821) #9 fcho2 (ENSELUG00000000085) #11 TMEM174 (ENSELUG00000002868) #13 btf3 (ENSELUG00000002875) ##15 foxd1 (ENSELUG00000002873) ankra2 (ENSELUG00000002891) #16 ARHGEF28 (ENSELUG00000002989) #18 ENC1 (ENSELUG00000003012) #19 hexb (ENSELUG00000003037) #20 gfm2 (ENSELUG00000003075) #21 nsa2 (ENSELUG00000003102) #22 tor1 (ENSELUG00000003156) egfl7 (ENSELUG00000003173) agpat2 (ENSELUG00000003185) dipk1b (ENSELUG00000003199) mrps2 (ENSELUG00000003223) ppp1r26 (ENSELUG00000003244) ENSELUG00000003257 ENSELUG00000003285 COL5A1 (ENSELUG00000003331) FNBP1 (ENSELUG00000003481) ENSELUG00000003539 CACFD1 (ENSELUG00000003557) ptcd2 (ENSELUG00000003584) MAP1B (ENSELUG00000000124) ptger4b (ENSELUG00000003604) Acanthomorphata ANCESTRAL SPECIES 15 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 ENSGT00390000013846.a.a Cod DUPLICATION Cod MODERN SPECIES 17 ENSGMOG00000008117 NPFFR2 (ENSGMOG00000008118) SLC4A4 (ENSGMOG00000008121) DCK (ENSGMOG00000008130) mob1bb (ENSGMOG00000008133) TNPO1 (ENSGMOG00000000347) #9 fcho2 (ENSGMOG00000000337) #11 TMEM174 (ENSGMOG00000023180) #13 foxd1 (ENSGMOG00000000330) btf3 (ENSGMOG00000000326) ##15 ankra2 (ENSGMOG00000000317) #16 ARHGEF28 (ENSGMOG00000000254) #18 ENC1 (ENSGMOG00000003140) #19 hexb (ENSGMOG00000003149) #20 gfm2 (ENSGMOG00000003177) #21 NSA2 (ENSGMOG00000027946) #22 ENSGMOG00000026460 ENSGMOG00000007055 ENSGMOG00000036383 ENSGMOG00000003221 ENSGMOG00000003212 #22 ENSGMOG00000027691 ENSGMOG00000030306 ENSGMOG00000013389 ENSGMOG00000007062 ENSGMOG00000007069 ENSGMOG00000000129 ENSGMOG00000011051 olfm1b (ENSGMOG00000011102) ENSGMOG00000025560 ENSGMOG00000034539 Cod MODERN SPECIES 17 TNPO1 (ENSGMOG00000000347) #9 fcho2 (ENSGMOG00000000337) #11 TMEM174 (ENSGMOG00000023180) #13 foxd1 (ENSGMOG00000000330) btf3 (ENSGMOG00000000326) ##15 ankra2 (ENSGMOG00000000317) #16 ARHGEF28 (ENSGMOG00000000254) #18 ENC1 (ENSGMOG00000003140) #19 hexb (ENSGMOG00000003149) #20 gfm2 (ENSGMOG00000003177) #21 NSA2 (ENSGMOG00000027946) #22 ENSGMOG00000026460 ENSGMOG00000007055 ENSGMOG00000036383 ENSGMOG00000003221 ENSGMOG00000003212 #22 ENSGMOG00000027691 ENSGMOG00000030306 ENSGMOG00000013389 ENSGMOG00000007062 ENSGMOG00000007069 ENSGMOG00000000129 ENSGMOG00000011051 olfm1b (ENSGMOG00000011102) ENSGMOG00000025560 ENSGMOG00000034539 mrps2 (ENSGMOG00000018790) dipk1b (ENSGMOG00000030249) ENSGMOG00000035676 ENSGMOG00000034161 ttll11 (ENSGMOG00000018810) Euacanthomorphacea ANCESTRAL SPECIES 12 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 ENSGT00390000013846.a.a Pinecone sodierfish MODERN SPECIES 3 ttll11 (ENSMMDG00005022356) dipk1b (ENSMMDG00005022355) mrps2 (ENSMMDG00005022354) ENSMMDG00005022352 ENSMMDG00005022351 ENSMMDG00005022348 FNBP1 (ENSMMDG00005021792) agpat2 (ENSMMDG00005021762) egfl7 (ENSMMDG00005021759) tor1 (ENSMMDG00005021756) ENSMMDG00005021755 #18 ENSMMDG00005021735 ENC1 (ENSMMDG00005021728) #19 hexb (ENSMMDG00005021472) #20 gfm2 (ENSMMDG00005021459) #21 nsa2 (ENSMMDG00005021452) #22 ankra2 (ENSMMDG00005021427) #16 btf3 (ENSMMDG00005021420) ##15 foxd1 (ENSMMDG00005021419) fcho2 (ENSMMDG00005021184) #11 TNPO1 (ENSMMDG00005020843) #9 mob1bb (ENSMMDG00005020817) dck (ENSMMDG00005020811) SLC4A4 (ENSMMDG00005016559) NPFFR2 (ENSMMDG00005016435) ENSMMDG00005016419 ENSMMDG00005016417 ENSMMDG00005016416 fbp1b (ENSMMDG00005016413) gas1b (ENSMMDG00005016412) ENSMMDG00005016069 Percomorphaceae ANCESTRAL SPECIES 16 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 ENSGT00390000013846.a.a Percomorphaceae_B ANCESTRAL SPECIES 16 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.f ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000154535.D.wb ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a Percomorphaceae_C ANCESTRAL SPECIES 17 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.f ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000154535.D.wb ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000181622 Percomorphaceae_D ANCESTRAL SPECIES 15 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.f ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b Carangaria ANCESTRAL SPECIES 17 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.f ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a.b ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b Carangaria_A ANCESTRAL SPECIES 18 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.f ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a.b ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b Barramundi perch MODERN SPECIES ENSLCAG00010022172 NPFFR2 (ENSLCAG00010022165) SLC4A4 (ENSLCAG00010021674) dck (ENSLCAG00010021576) mob1bb (ENSLCAG00010021563) TNPO1 (ENSLCAG00010021272) #9 fcho2 (ENSLCAG00010021128) #11 TMEM174 (ENSLCAG00010021040) #13 foxd1 (ENSLCAG00010021037) btf3 (ENSLCAG00010021025) ##15 ankra2 (ENSLCAG00010021015) #16 ARHGEF28 (ENSLCAG00010021010) #18 ENC1 (ENSLCAG00010021005) #19 hexb (ENSLCAG00010020934) #20 gfm2 (ENSLCAG00010020737) #21 nsa2 (ENSLCAG00010020661) #22 tor1 (ENSLCAG00010020635) egfl7 (ENSLCAG00010020616) agpat2 (ENSLCAG00010020612) FNBP1 (ENSLCAG00010020448) ENSLCAG00010020278 olfm1a (ENSLCAG00010020247) ENSLCAG00010020242 mrps2 (ENSLCAG00010020240) dipk1b (ENSLCAG00010020238) ENSLCAG00010020235 ttll11 (ENSLCAG00010020231) dab2ipb (ENSLCAG00010020210) Seriola ANCESTRAL SPECIES 114 ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.f.a ENSGT00950000182888.a.a.a.f.b ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT01050000244898.b.b ENSGT00940000157321 ENSGT00940000156290.b ENSGT01070000253744.b.b.f ENSGT00940000154821.a.a Greater amberjack MODERN SPECIES 286 ENC1 (ENSSDUG00000021619) #19 hexb (ENSSDUG00000021322) #20 gfm2 (ENSSDUG00000021273) #21 nsa2 (ENSSDUG00000021266) #22 tor1 (ENSSDUG00000021250) Yellowtail amberjack MODERN SPECIES 3042 ARSB (ENSSLDG00000014410) DMGDH (ENSSLDG00000014440) bhmt (ENSSLDG00000014491) JMY (ENSSLDG00000014512) HOMER1 (ENSSLDG00000014538) TNPO1 (ENSSLDG00000014578) #9 fcho2 (ENSSLDG00000014677) #11 TMEM174 (ENSSLDG00000014821) #13 foxd1 (ENSSLDG00000014830) btf3 (ENSSLDG00000014843) ##15 ankra2 (ENSSLDG00000014857) #16 ARHGEF28 (ENSSLDG00000014890) #18 ENC1 (ENSSLDG00000014933) #19 hexb (ENSSLDG00000015025) #20 gfm2 (ENSSLDG00000014952) #21 nsa2 (ENSSLDG00000015100) #22 tor1 (ENSSLDG00000015126) tor1 (ENSSLDG00000015142) tor1 (ENSSLDG00000015158) egfl7 (ENSSLDG00000015176) agpat2 (ENSSLDG00000015225) FNBP1 (ENSSLDG00000015269) COL5A1 (ENSSLDG00000015379) olfm1a (ENSSLDG00000015461) mrps2 (ENSSLDG00000015489) mob1bb (ENSSLDG00000015512) dck (ENSSLDG00000015520) SLC4A4 (ENSSLDG00000015570) NPFFR2 (ENSSLDG00000015760) ENSSLDG00000015787 ENSSLDG00000015805 Pleuronectoidei ANCESTRAL SPECIES 7 ENSGT00940000154886.a.b ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT01040000244713 ENSGT00940000157140.b.a.b.b ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000156354.p ENSGT00510000046704.b.a.c ENSGT00390000003122.a.a.a ENSGT00940000158176 ENSGT00940000158270 ENSGT00990000203589.b.b ENSGT00940000157310.g ENSGT00940000157603 ENSGT00390000009710 ENSGT00940000159952.a.b ENSGT00390000017026 ENSGT00940000157817 ENSGT00390000001362.b ENSGT00940000161125 Turbot MODERN SPECIES 16 nudcd3 (ENSSMAG00000011438) ENSSMAG00000011390 ENSSMAG00000011280 ENSSMAG00000011258 TNPO1 (ENSSMAG00000011202) #9 fcho2 (ENSSMAG00000011163) #11 ENSSMAG00000032227 foxd1 (ENSSMAG00000028504) btf3 (ENSSMAG00000011148) ##15 ankra2 (ENSSMAG00000011128) #16 ARHGEF28 (ENSSMAG00000011073) #18 ENSSMAG00000034516 ENC1 (ENSSMAG00000011072) #19 hexb (ENSSMAG00000010849) #20 gfm2 (ENSSMAG00000010773) #21 NSA2 (ENSSMAG00000010754) #22 ENSSMAG00000010704 HOMER1 (ENSSMAG00000010667) JMY (ENSSMAG00000010657) bhmt (ENSSMAG00000010622) DMGDH (ENSSMAG00000010584) ARSB (ENSSMAG00000010569) LHFPL2 (ENSSMAG00000010559) ENSSMAG00000026772 SCAMP1 (ENSSMAG00000010527) AP3B1 (ENSSMAG00000010503) tbca (ENSSMAG00000010486) otpa (ENSSMAG00000026303) wdr41 (ENSSMAG00000010452) PDE8B (ENSSMAG00000010435) crhbp (ENSSMAG00000010424) Tongue sole MODERN SPECIES 5 ENSCSEG00000012569 ENSCSEG00000012575 NPFFR2 (ENSCSEG00000012579) SLC4A4 (ENSCSEG00000012599) dck (ENSCSEG00000012658) mob1bb (ENSCSEG00000012669) TNPO1 (ENSCSEG00000012674) #9 fcho2 (ENSCSEG00000012754) #11 foxd1 (ENSCSEG00000012995) btf3 (ENSCSEG00000013006) ##15 ankra2 (ENSCSEG00000012998) #16 ARHGEF28 (ENSCSEG00000013022) #18 ENC1 (ENSCSEG00000013077) #19 hexb (ENSCSEG00000013085) #20 gfm2 (ENSCSEG00000013115) #21 nsa2 (ENSCSEG00000013161) #22 tor1 (ENSCSEG00000013176) HOMER1 (ENSCSEG00000013201) JMY (ENSCSEG00000013221) bhmt (ENSCSEG00000013233) DMGDH (ENSCSEG00000013250) ARSB (ENSCSEG00000013290) ARSB (ENSCSEG00000013306) ARSB (ENSCSEG00000013315) ARSB (ENSCSEG00000013331) lhfpl2a (ENSCSEG00000013349) scamp1 (ENSCSEG00000013358) AP3B1 (ENSCSEG00000013388) tbca (ENSCSEG00000013428) otpa (ENSCSEG00000013434) wdr41 (ENSCSEG00000013442) Anabantaria ANCESTRAL SPECIES 12 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00950000182888.a.a.a.f ENSGT00390000014118 ENSGT00940000156959.A ENSGT00940000159211.C ENSGT00950000183047.d.e ENSGT00390000008726.h.a ENSGT00940000160015 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 Zig-zag eel MODERN SPECIES 3 ENSMAMG00000001936 NPFFR2 (ENSMAMG00000001663) SLC4A4 (ENSMAMG00000001527) DCK (ENSMAMG00000001492) mob1bb (ENSMAMG00000025274) TNPO1 (ENSMAMG00000001357) #9 fcho2 (ENSMAMG00000001025) #11 TMEM174 (ENSMAMG00000000976) #13 foxd1 (ENSMAMG00000000953) btf3 (ENSMAMG00000028335) ##15 ankra2 (ENSMAMG00000000896) #16 ARHGEF28 (ENSMAMG00000000680) #18 ENC1 (ENSMAMG00000000656) #19 hexb (ENSMAMG00000000591) #20 gfm2 (ENSMAMG00000000452) #21 NSA2 (ENSMAMG00000025113) #22 ENSMAMG00000000375 ENSMAMG00000019247 mrps2 (ENSMAMG00000019225) ENSMAMG00000019221 ENSMAMG00000019202 ENSMAMG00000019021 ENSMAMG00000018845 ENSMAMG00000018821 ENSMAMG00000024326 ENSMAMG00000018780 ttll11 (ENSMAMG00000018750) dab2ipb (ENSMAMG00000018682) ENSMAMG00000027358 fibcd1b (ENSMAMG00000018653) ENSMAMG00000018613 Anabantoidei ANCESTRAL SPECIES 16 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00950000182888.a.a.a.f ENSGT00390000014118 ENSGT00940000156959.A ENSGT00940000159211.C ENSGT00950000183047.d.e ENSGT00390000008726.h.a ENSGT00940000160015 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 Climbing perch MODERN SPECIES 3 ENSATEG00000010080 ENSATEG00000010200 NPFFR2 (ENSATEG00000028711) SLC4A4 (ENSATEG00000010257) DCK (ENSATEG00000010355) mob1bb (ENSATEG00000010361) TNPO1 (ENSATEG00000010408) #9 fcho2 (ENSATEG00000010522) #11 foxd1 (ENSATEG00000010611) btf3 (ENSATEG00000010619) ##15 ankra2 (ENSATEG00000010640) #16 ARHGEF28 (ENSATEG00000010673) #18 ENC1 (ENSATEG00000010768) #19 hexb (ENSATEG00000010779) #20 gfm2 (ENSATEG00000010821) #21 NSA2 (ENSATEG00000010924) #22 ENSATEG00000010982 ENSATEG00000028054 ENSATEG00000010990 ENSATEG00000011025 ENSATEG00000026414 ENSATEG00000011044 ENSATEG00000011084 ENSATEG00000011496 ENSATEG00000011634 ENSATEG00000011642 mrps2 (ENSATEG00000029578) ENSATEG00000011669 ttll11 (ENSATEG00000011693) dab2ipb (ENSATEG00000011718) zgc:63972 (ENSATEG00000028263) Siamese fighting fish MODERN SPECIES 3 ENSBSLG00000019462 NPFFR2 (ENSBSLG00000019417) SLC4A4 (ENSBSLG00000018599) dck (ENSBSLG00000018568) mob1bb (ENSBSLG00000018553) TNPO1 (ENSBSLG00000017922) #9 fcho2 (ENSBSLG00000017359) #11 TMEM174 (ENSBSLG00000017293) #13 foxd1 (ENSBSLG00000017286) btf3 (ENSBSLG00000017215) ##15 ankra2 (ENSBSLG00000017046) #16 ARHGEF28 (ENSBSLG00000016710) #18 ENC1 (ENSBSLG00000016048) #19 hexb (ENSBSLG00000014718) #20 gfm2 (ENSBSLG00000014536) #21 nsa2 (ENSBSLG00000014530) #22 tor1 (ENSBSLG00000014441) ENSBSLG00000014350 ENSBSLG00000014342 tor1 (ENSBSLG00000014198) ENSBSLG00000014168 ENSBSLG00000014155 ENSBSLG00000014139 olfm1a (ENSBSLG00000014064) COL5A1 (ENSBSLG00000013355) FNBP1 (ENSBSLG00000011784) agpat2 (ENSBSLG00000011659) egfl7 (ENSBSLG00000011602) mrps2 (ENSBSLG00000011439) dipk1b (ENSBSLG00000011434) ttll11 (ENSBSLG00000011421) Eupercaria ANCESTRAL SPECIES 13 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00950000182888.a.a.a.f ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000154535.D.wb ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a Tetraodontidae ANCESTRAL SPECIES 19 ENSGT00940000154886.a.b ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00950000182888.a.a.a.f ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000166104 Tetraodon MODERN SPECIES 19 aif1l (ENSTNIG00000007490) ENSTNIG00000007489 ENSTNIG00000007488 NPFFR2 (ENSTNIG00000007487) SLC4A4 (ENSTNIG00000007486) dck (ENSTNIG00000007485) mob1bb (ENSTNIG00000007484) TNPO1 (ENSTNIG00000007483) #9 fcho2 (ENSTNIG00000006689) #11 foxd1 (ENSTNIG00000013433) btf3 (ENSTNIG00000013434) ##15 ankra2 (ENSTNIG00000013435) #16 ENSTNIG00000013436 #18 hexb (ENSTNIG00000013437) #20 gfm2 (ENSTNIG00000013438) #21 nsa2 (ENSTNIG00000013439) #22 tor1 (ENSTNIG00000013440) egfl7 (ENSTNIG00000013441) FNBP1 (ENSTNIG00000013442) COL5A1 (ENSTNIG00000013443) mrps2 (ENSTNIG00000013444) dab2 (ENSTNIG00000013445) c9 (ENSTNIG00000013446) gas1b (ENSTNIG00000013447) fbp1b (ENSTNIG00000013448) ENSTNIG00000001408 ENSTNIG00000013449 fibcd1b (ENSTNIG00000013450) zgc:63972 (ENSTNIG00000013451) dab2ipb (ENSTNIG00000013452) ttll11 (ENSTNIG00000013453) Fugu MODERN SPECIES 18 prkaa1 (ENSTRUG00000018441) aif1l (ENSTRUG00000020405) ENSTRUG00000032548 ENSTRUG00000028567 npffr-2 (ENSTRUG00000018455) SLC4A4 (ENSTRUG00000018460) dck (ENSTRUG00000031783) mob1bb (ENSTRUG00000018489) fcho2 (ENSTRUG00000018494) #11 foxd1 (ENSTRUG00000018503) btf3 (ENSTRUG00000023038) ##15 ankra2 (ENSTRUG00000018506) #16 ARHGEF28 (ENSTRUG00000018508) #18 ENC1 (ENSTRUG00000018509) #19 hexb (ENSTRUG00000018510) #20 nsa2 (ENSTRUG00000025113) #22 tor1 (ENSTRUG00000024523) tor1 (ENSTRUG00000018521) tor1 (ENSTRUG00000024655) egfl7 (ENSTRUG00000021363) agpat2 (ENSTRUG00000018530) FNBP1 (ENSTRUG00000018533) COL5A1 (ENSTRUG00000018538) ENSTRUG00000021440 olfm1a (ENSTRUG00000018565) ENSTRUG00000020074 mrps2 (ENSTRUG00000018568) dab2 (ENSTRUG00000018569) c9 (ENSTRUG00000018574) gas1b (ENSTRUG00000018577) fbp1b (ENSTRUG00000015762) Eupecaria_A ANCESTRAL SPECIES 14 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00950000182888.a.a.a.f ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 Eupecaria_B ANCESTRAL SPECIES 14 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00950000182888.a.a.a.f ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000177534 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b Perciformes ANCESTRAL SPECIES 16 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT01040000244713 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00950000182888.a.a.a.f ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 Cottioidei ANCESTRAL SPECIES 18 ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00390000015280 ENSGT00940000158321 ENSGT00950000183171.A.b.a.a ENSGT00940000159526 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 ENSGT00390000013846.a.a Stickleback MODERN SPECIES 13 c9 (ENSGACG00000015856) fbp1b (ENSGACG00000015857) ENSGACG00000015859 ENSGACG00000015860 NPFFR2 (ENSGACG00000015862) SLC4A4 (ENSGACG00000015864) dck (ENSGACG00000015866) mob1bb (ENSGACG00000015867) trappc13 (ENSGACG00000015870) sgtb (ENSGACG00000015874) nln (ENSGACG00000015881) erbin (ENSGACG00000015884) ENC1 (ENSGACG00000015886) #19 hexb (ENSGACG00000015887) #20 gfm2 (ENSGACG00000015889) #21 nsa2 (ENSGACG00000015892) #22 tor1 (ENSGACG00000015894) egfl7 (ENSGACG00000015896) agpat2 (ENSGACG00000015898) ENSGACG00000015900 FNBP1 (ENSGACG00000015902) COL5A1 (ENSGACG00000015903) olfm1a (ENSGACG00000015907) mrps2 (ENSGACG00000015913) dipk1b (ENSGACG00000015914) ttll11 (ENSGACG00000015915) dab2ipb (ENSGACG00000015916) zgc:63972 (ENSGACG00000015917) fibcd1b (ENSGACG00000015918) ENSGACG00000015920 aif1l (ENSGACG00000015924) Perciformes_a ANCESTRAL SPECIES 12 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT01040000244713 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00950000182888.a.a.a.f ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 Channel bull blenny MODERN SPECIES 3 ENSCGOG00000022508 NPFFR2 (ENSCGOG00000022515) SLC4A4 (ENSCGOG00000022658) dck (ENSCGOG00000023978) mob1bb (ENSCGOG00000023990) TNPO1 (ENSCGOG00000023998) #9 fcho2 (ENSCGOG00000024058) #11 ENSCGOG00000024118 foxd1 (ENSCGOG00000004064) btf3 (ENSCGOG00000004085) ##15 ankra2 (ENSCGOG00000004121) #16 ARHGEF28 (ENSCGOG00000004149) #18 ENC1 (ENSCGOG00000004176) #19 hexb (ENSCGOG00000004228) #20 gfm2 (ENSCGOG00000005289) #21 nsa2 (ENSCGOG00000005397) #22 tor1 (ENSCGOG00000005447) tor1 (ENSCGOG00000005480) tor1 (ENSCGOG00000005484) tor1 (ENSCGOG00000005486) tor1 (ENSCGOG00000005524) egfl7 (ENSCGOG00000005539) agpat2 (ENSCGOG00000005552) FNBP1 (ENSCGOG00000005602) COL5A1 (ENSCGOG00000008390) olfm1a (ENSCGOG00000008397) ENSCGOG00000008410 mrps2 (ENSCGOG00000008415) ENSCGOG00000008422 ENSCGOG00000008425 dipk1b (ENSCGOG00000008428) Pike perch MODERN SPECIES 33 ENSSLUG00000001570 ENSSLUG00000025464 NPFFR2 (ENSSLUG00000025461) SLC4A4 (ENSSLUG00000024801) dck (ENSSLUG00000024643) mob1bb (ENSSLUG00000024630) TNPO1 (ENSSLUG00000024422) #9 fcho2 (ENSSLUG00000024230) #11 foxd1 (ENSSLUG00000024212) btf3 (ENSSLUG00000024208) ##15 ankra2 (ENSSLUG00000024202) #16 ARHGEF28 (ENSSLUG00000024179) #18 ENC1 (ENSSLUG00000024173) #19 hexb (ENSSLUG00000023865) #20 gfm2 (ENSSLUG00000023617) #21 nsa2 (ENSSLUG00000023585) #22 tor1 (ENSSLUG00000023578) tor1 (ENSSLUG00000023572) egfl7 (ENSSLUG00000023566) agpat2 (ENSSLUG00000023560) FNBP1 (ENSSLUG00000022956) ENSSLUG00000022886 COL5A1 (ENSSLUG00000022876) olfm1a (ENSSLUG00000022831) ENSSLUG00000022816 mrps2 (ENSSLUG00000022813) dipk1b (ENSSLUG00000022807) ttll11 (ENSSLUG00000022799) dab2ipb (ENSSLUG00000021582) zgc:63972 (ENSSLUG00000021502) fibcd1b (ENSSLUG00000021495) Eupecaria_C ANCESTRAL SPECIES 9 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000177534 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 Eupercaria_incertae_sedis ANCESTRAL SPECIES 6 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000177534 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b Large yellow croaker MODERN SPECIES 4 atp5fa1 (ENSLCRG00005010046) SLC4A4 (ENSLCRG00005008735) dck (ENSLCRG00005008722) mob1bb (ENSLCRG00005008720) TNPO1 (ENSLCRG00005008667) #9 fcho2 (ENSLCRG00005006297) #11 ENSLCRG00005006257 TMEM174 (ENSLCRG00005006256) #13 foxd1 (ENSLCRG00005006254) btf3 (ENSLCRG00005006241) ##15 ankra2 (ENSLCRG00005006233) #16 ARHGEF28 (ENSLCRG00005006225) #18 ENC1 (ENSLCRG00005006223) #19 hexb (ENSLCRG00005005847) #20 gfm2 (ENSLCRG00005005797) #21 nsa2 (ENSLCRG00005005788) #22 tor1 (ENSLCRG00005005786) egfl7 (ENSLCRG00005005783) agpat2 (ENSLCRG00005005782) FNBP1 (ENSLCRG00005005019) ENSLCRG00005005002 COL5A1 (ENSLCRG00005004998) olfm1a (ENSLCRG00005004992) ENSLCRG00005004991 mrps2 (ENSLCRG00005004990) dipk1b (ENSLCRG00005004988) ttll11 (ENSLCRG00005004985) dab2ipb (ENSLCRG00005004818) zgc:63972 (ENSLCRG00005004807) fibcd1b (ENSLCRG00005004803) ENSLCRG00005004791 European seabass MODERN SPECIES 9 ENSDLAG00005011969 NPFFR2 (ENSDLAG00005011980) SLC4A4 (ENSDLAG00005012024) DCK (ENSDLAG00005015518) mob1bb (ENSDLAG00005001255) TNPO1 (ENSDLAG00005015570) #9 fcho2 (ENSDLAG00005016468) #11 TMEM174 (ENSDLAG00005017336) #13 foxd1 (ENSDLAG00005029808) btf3 (ENSDLAG00005006186) ##15 ankra2 (ENSDLAG00005017531) #16 ARHGEF28 (ENSDLAG00005017354) #18 ENC1 (ENSDLAG00005017634) #19 hexb (ENSDLAG00005017654) #20 gfm2 (ENSDLAG00005018401) #21 NSA2 (ENSDLAG00005019422) #22 ENSDLAG00005029718 ENSDLAG00005027893 ENSDLAG00005028638 ENSDLAG00005032168 ENSDLAG00005019465 ENSDLAG00005020848 ENSDLAG00005020853 ENSDLAG00005026497 ENSDLAG00005026339 ENSDLAG00005020886 ENSDLAG00005020889 ttll11 (ENSDLAG00005020892) dab2ipb (ENSDLAG00005020932) zgc:63972 (ENSDLAG00005022299) fibcd1b (ENSDLAG00005027095) Gilthead seabream MODERN SPECIES 3 ENSSAUG00010010132 NPFFR2 (ENSSAUG00010010136) SLC4A4 (ENSSAUG00010010148) dck (ENSSAUG00010010725) mob1bb (ENSSAUG00010010730) TNPO1 (ENSSAUG00010010779) #9 fcho2 (ENSSAUG00010013016) #11 TMEM174 (ENSSAUG00010013732) #13 foxd1 (ENSSAUG00010013733) btf3 (ENSSAUG00010013734) ##15 ankra2 (ENSSAUG00010013735) #16 ARHGEF28 (ENSSAUG00010013738) #18 ENC1 (ENSSAUG00010013742) #19 hexb (ENSSAUG00010013757) #20 gfm2 (ENSSAUG00010013860) #21 nsa2 (ENSSAUG00010015274) #22 tor1 (ENSSAUG00010015282) tor1 (ENSSAUG00010015285) tor1 (ENSSAUG00010015287) tor1 (ENSSAUG00010015289) tor1 (ENSSAUG00010015291) ENSSAUG00010015298 ENSSAUG00010015309 egfl7 (ENSSAUG00010015339) agpat2 (ENSSAUG00010015362) FNBP1 (ENSSAUG00010015419) ENSSAUG00010019621 COL5A1 (ENSSAUG00010019625) olfm1a (ENSSAUG00010019643) ENSSAUG00010019646 mrps2 (ENSSAUG00010019649) Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 377 fcho2 (ENSLBEG00000021231) #11 foxd1 (ENSLBEG00000021126) btf3 (ENSLBEG00000021101) ##15 ankra2 (ENSLBEG00000021076) #16 ARHGEF28 (ENSLBEG00000020679) #18 ENC1 (ENSLBEG00000020565) #19 hexb (ENSLBEG00000020421) #20 gfm2 (ENSLBEG00000020327) #21 nsa2 (ENSLBEG00000020299) #22 tor1 (ENSLBEG00000020286) egfl7 (ENSLBEG00000020202) agpat2 (ENSLBEG00000020181) ENSLBEG00000020159 Ballan wrasse MODERN SPECIES 47 KLHL29 (ENSLBEG00000000031) nsa2 (ENSLBEG00000000008) #22 TRIB2 (ENSLBEG00000000005) ENSLBEG00000025803 NAPB (ENSLBEG00000025768) gpcpd1 (ENSLBEG00000025732) ENSLBEG00000025685 trmt6 (ENSLBEG00000025654) FERMT1 (ENSLBEG00000025626) bmp2b (ENSLBEG00000025600) PLCB1 (ENSLBEG00000025556) PLCB4 (ENSLBEG00000025485) ENSLBEG00000025463 LAMP5 (ENSLBEG00000025442) pak5 (ENSLBEG00000025422) ENSLBEG00000025351 ENSLBEG00000025320 Ovalentaria ANCESTRAL SPECIES 16 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.f ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000154535.D.wb ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a Ovalentaria_B ANCESTRAL SPECIES 14 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000154535.D.wb ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000181622 Pomacentridae ANCESTRAL SPECIES 12 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 Pomacentridae_A ANCESTRAL SPECIES 10 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 Amphiprion ANCESTRAL SPECIES 5 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 ENSGT00390000013846.a.a Clown anemonefish MODERN SPECIES 1330 ENC1 (ENSAOCG00000014173) #19 hexb (ENSAOCG00000014256) #20 gfm2 (ENSAOCG00000014342) #21 nsa2 (ENSAOCG00000014373) #22 tor1 (ENSAOCG00000014393) Orange clownfish MODERN SPECIES 7 NPFFR2 (ENSAPEG00000001373) SLC4A4 (ENSAPEG00000001234) dck (ENSAPEG00000001210) mob1bb (ENSAPEG00000001183) TNPO1 (ENSAPEG00000001112) #9 fcho2 (ENSAPEG00000000982) #11 TMEM174 (ENSAPEG00000000954) #13 ENSAPEG00000000952 foxd1 (ENSAPEG00000000936) btf3 (ENSAPEG00000000915) ##15 ankra2 (ENSAPEG00000000895) #16 ARHGEF28 (ENSAPEG00000000716) #18 ENC1 (ENSAPEG00000000639) #19 hexb (ENSAPEG00000000545) #20 gfm2 (ENSAPEG00000000424) #21 nsa2 (ENSAPEG00000000376) #22 tor1 (ENSAPEG00000000332) egfl7 (ENSAPEG00000023724) agpat2 (ENSAPEG00000023715) FNBP1 (ENSAPEG00000023547) ENSAPEG00000023518 COL5A1 (ENSAPEG00000023373) olfm1a (ENSAPEG00000023333) mrps2 (ENSAPEG00000023312) dipk1b (ENSAPEG00000023298) ttll11 (ENSAPEG00000023272) dab2ipb (ENSAPEG00000023179) ENSAPEG00000023140 zgc:63972 (ENSAPEG00000023131) fibcd1b (ENSAPEG00000023089) ENSAPEG00000023029 Spiny chromis MODERN SPECIES 150 TMEM174 (ENSAPOG00000006338) #13 foxd1 (ENSAPOG00000006297) btf3 (ENSAPOG00000006276) ##15 ankra2 (ENSAPOG00000006251) #16 ARHGEF28 (ENSAPOG00000006195) #18 ENC1 (ENSAPOG00000001131) #19 hexb (ENSAPOG00000006044) #20 gfm2 (ENSAPOG00000005965) #21 nsa2 (ENSAPOG00000005882) #22 tor1 (ENSAPOG00000005853) egfl7 (ENSAPOG00000005827) agpat2 (ENSAPOG00000000141) FNBP1 (ENSAPOG00000000139) ENSAPOG00000005629 COL5A1 (ENSAPOG00000005584) ENSAPOG00000005203 Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 2281 nsa2 (ENSSPAG00000005160) #22 tor1 (ENSSPAG00000005150) egfl7 (ENSSPAG00000005130) agpat2 (ENSSPAG00000005109) Bicolor damselfish MODERN SPECIES 1280 ARHGEF28 (ENSSPAG00000014338) #18 ENC1 (ENSSPAG00000014329) #19 hexb (ENSSPAG00000014244) #20 gfm2 (ENSSPAG00000014163) #21 nsa2 (ENSSPAG00000014137) #22 tor1 (ENSSPAG00000014091) Cichlidae ANCESTRAL SPECIES 10 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ##15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000154535.D.wb ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ##15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ##15 ENSGT00940000153288.a.b.a.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000179020 Haplochromini ANCESTRAL SPECIES ENSGT00940000154886.a.b ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000179020 Burton s mouthbrooder MODERN SPECIES 287 ENC1 (ENSHBUG00000011125) #19 hexb (ENSHBUG00000011110) #20 gfm2 (ENSHBUG00000011021) #21 nsa2 (ENSHBUG00000010944) #22 tor1 (ENSHBUG00000010924) egfl7 (ENSHBUG00000010873) agpat2 (ENSHBUG00000010863) FNBP1 (ENSHBUG00000010835) ENSHBUG00000010575 COL5A1 (ENSHBUG00000010535) ENSHBUG00000010242 olfm1a (ENSHBUG00000010226) mrps2 (ENSHBUG00000010171) dipk1b (ENSHBUG00000010155) ENSHBUG00000010142 ttll11 (ENSHBUG00000010134) dab2ipb (ENSHBUG00000010059) zgc:63972 (ENSHBUG00000009488) ENSHBUG00000009480 Haplochromini_A ANCESTRAL SPECIES 12 ENSGT00940000154886.a.b ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000179020 P. nyererei MODERN SPECIES 297 ENSPNYG00000000952 ENSPNYG00000000984 NPFFR2 (ENSPNYG00000001069) SLC4A4 (ENSPNYG00000001164) dck (ENSPNYG00000001253) mob1bb (ENSPNYG00000001509) TNPO1 (ENSPNYG00000001522) #9 fcho2 (ENSPNYG00000001628) #11 foxd1 (ENSPNYG00000001818) btf3 (ENSPNYG00000001828) ##15 ankra2 (ENSPNYG00000001843) #16 ENSPNYG00000001882 #18 ENC1 (ENSPNYG00000001928) #19 hexb (ENSPNYG00000001935) #20 gfm2 (ENSPNYG00000001950) #21 nsa2 (ENSPNYG00000002028) #22 tor1 (ENSPNYG00000002052) egfl7 (ENSPNYG00000002069) agpat2 (ENSPNYG00000002138) FNBP1 (ENSPNYG00000002152) ENSPNYG00000002214 ENSPNYG00000002231 COL5A1 (ENSPNYG00000002267) olfm1a (ENSPNYG00000002567) ENSPNYG00000002612 mrps2 (ENSPNYG00000002624) dipk1b (ENSPNYG00000002632) ENSPNYG00000002651 ttll11 (ENSPNYG00000002662) dab2ipb (ENSPNYG00000002705) ENSPNYG00000002802 Haplochromini_B ANCESTRAL SPECIES 4 ENSGT00940000154886.a.b ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000179020 Eastern happy MODERN SPECIES 19 ENSACLG00000027054 NPFFR2 (ENSACLG00000027070) SLC4A4 (ENSACLG00000027117) dck (ENSACLG00000027209) mob1bb (ENSACLG00000027216) TNPO1 (ENSACLG00000027223) #9 fcho2 (ENSACLG00000027259) #11 ENSACLG00000027336 foxd1 (ENSACLG00000027344) btf3 (ENSACLG00000027347) ##15 ankra2 (ENSACLG00000027357) #16 ARHGEF28 (ENSACLG00000027367) #18 ENC1 (ENSACLG00000027402) #19 hexb (ENSACLG00000027420) #20 gfm2 (ENSACLG00000027430) #21 nsa2 (ENSACLG00000027450) #22 tor1 (ENSACLG00000027453) egfl7 (ENSACLG00000027456) agpat2 (ENSACLG00000027477) FNBP1 (ENSACLG00000027481) ENSACLG00000027526 COL5A1 (ENSACLG00000027546) olfm1a (ENSACLG00000027600) ENSACLG00000027602 ENSACLG00000027608 mrps2 (ENSACLG00000027610) dipk1b (ENSACLG00000027613) ENSACLG00000027616 ttll11 (ENSACLG00000027621) ENSACLG00000027627 dab2ipb (ENSACLG00000027638) Zebra mbuna MODERN SPECIES 1110 ENSMZEG00005005187 ENSMZEG00005005173 NPFFR2 (ENSMZEG00005005088) SLC4A4 (ENSMZEG00005005012) dck (ENSMZEG00005004974) mob1bb (ENSMZEG00005004954) TNPO1 (ENSMZEG00005004913) #9 fcho2 (ENSMZEG00005004754) #11 foxd1 (ENSMZEG00005004712) btf3 (ENSMZEG00005004698) ##15 ankra2 (ENSMZEG00005004645) #16 ENSMZEG00005004598 #18 ENC1 (ENSMZEG00005004589) #19 hexb (ENSMZEG00005004537) #20 gfm2 (ENSMZEG00005004469) #21 nsa2 (ENSMZEG00005004450) #22 tor1 (ENSMZEG00005004445) egfl7 (ENSMZEG00005004420) agpat2 (ENSMZEG00005004407) FNBP1 (ENSMZEG00005004314) ENSMZEG00005004297 COL5A1 (ENSMZEG00005004152) olfm1a (ENSMZEG00005004110) mrps2 (ENSMZEG00005004066) dipk1b (ENSMZEG00005004041) ENSMZEG00005004032 ttll11 (ENSMZEG00005003989) dab2ipb (ENSMZEG00005003883) zgc:63972 (ENSMZEG00005003834) fibcd1b (ENSMZEG00005003810) ENSMZEG00005003730 Lyretail cichlid MODERN SPECIES 336 ENSNBRG00000010215 ENSNBRG00000010162 NPFFR2 (ENSNBRG00000010141) SLC4A4 (ENSNBRG00000010089) dck (ENSNBRG00000010072) mob1bb (ENSNBRG00000010053) TNPO1 (ENSNBRG00000009998) #9 fcho2 (ENSNBRG00000009710) #11 foxd1 (ENSNBRG00000009642) btf3 (ENSNBRG00000009623) ##15 ankra2 (ENSNBRG00000009594) #16 ARHGEF28 (ENSNBRG00000009368) #18 ENC1 (ENSNBRG00000009321) #19 hexb (ENSNBRG00000009225) #20 gfm2 (ENSNBRG00000009181) #21 nsa2 (ENSNBRG00000009155) #22 tor1 (ENSNBRG00000009136) egfl7 (ENSNBRG00000009119) agpat2 (ENSNBRG00000009109) FNBP1 (ENSNBRG00000009051) ENSNBRG00000009001 COL5A1 (ENSNBRG00000008750) olfm1a (ENSNBRG00000008693) mrps2 (ENSNBRG00000008658) dipk1b (ENSNBRG00000008628) ENSNBRG00000008612 ENSNBRG00000008604 dab2ipb (ENSNBRG00000008531) zgc:63972 (ENSNBRG00000008471) ENSNBRG00000008437 fibcd1b (ENSNBRG00000008413) Nile tilapia MODERN SPECIES 19 ENSONIG00000011135 NPFFR2 (ENSONIG00000011136) SLC4A4 (ENSONIG00000011138) dck (ENSONIG00000011146) mob1bb (ENSONIG00000011150) TNPO1 (ENSONIG00000011151) #9 fcho2 (ENSONIG00000011160) #11 ENSONIG00000040457 foxd1 (ENSONIG00000020510) btf3 (ENSONIG00000011166) ##15 ankra2 (ENSONIG00000037402) #16 ARHGEF28 (ENSONIG00000011175) #18 ENC1 (ENSONIG00000020511) #19 hexb (ENSONIG00000011177) #20 gfm2 (ENSONIG00000011183) #21 nsa2 (ENSONIG00000011188) #22 tor1 (ENSONIG00000011193) egfl7 (ENSONIG00000011197) ENSONIG00000035802 agpat2 (ENSONIG00000011201) FNBP1 (ENSONIG00000011203) ENSONIG00000011209 olfm1a (ENSONIG00000011237) ENSONIG00000023677 mrps2 (ENSONIG00000011240) dipk1b (ENSONIG00000011241) ttll11 (ENSONIG00000011243) dab2ipb (ENSONIG00000011245) zgc:63972 (ENSONIG00000011250) fibcd1b (ENSONIG00000011251) ENSONIG00000011253 Midas cichlid MODERN SPECIES 1127 zgc:63972 (ENSACIG00000002585) dab2ipb (ENSACIG00000002603) ttll11 (ENSACIG00000002644) dipk1b (ENSACIG00000002672) mrps2 (ENSACIG00000002684) ENSACIG00000002695 olfm1a (ENSACIG00000002699) ENSACIG00000002727 ENSACIG00000002974 FNBP1 (ENSACIG00000002989) agpat2 (ENSACIG00000003013) egfl7 (ENSACIG00000003055) tor1 (ENSACIG00000003085) hexb (ENSACIG00000003138) #20 gfm2 (ENSACIG00000003338) #21 nsa2 (ENSACIG00000003390) #22 ARHGEF28 (ENSACIG00000003427) #18 ankra2 (ENSACIG00000003574) #16 btf3 (ENSACIG00000003624) ##15 foxd1 (ENSACIG00000003660) fcho2 (ENSACIG00000003668) #11 TNPO1 (ENSACIG00000003711) #9 mob1bb (ENSACIG00000003766) dck (ENSACIG00000003784) SLC4A4 (ENSACIG00000003815) NPFFR2 (ENSACIG00000003872) ENSACIG00000003896 ENSACIG00000004007 ENSACIG00000004021 fbp1b (ENSACIG00000004034) gas1b (ENSACIG00000004058) Atherinomorphae ANCESTRAL SPECIES 17 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.f ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 Cyprinodontiformes ANCESTRAL SPECIES 16 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.f ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 Cyprinodontoidei ANCESTRAL SPECIES 16 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.f ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000154427.A.d ENSGT01090000260030.a.b.a.b.a.c.b ENSGT00390000017030.b.a Poeciliinae ANCESTRAL SPECIES 12 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.f ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000154427.A.d.a ENSGT00940000155976.b.a.b ENSGT00940000166104 Poecilia ANCESTRAL SPECIES 12 ENSGT00940000163467.a.a.b.f.a.b.b ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.f ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000154427.A.d.b ENSGT01090000260030.a.b.a.b.a.c.b ENSGT00940000155976.b.a.b NAME_6 ANCESTRAL SPECIES 13 ENSGT00940000154821.a.a ENSGT00940000163467.a.a.b.f.a.b.b ENSGT01070000253744.b.b.f ENSGT00940000156290.b.a ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.f ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000154427.A.d.b ENSGT00940000154427.A.d.a ENSGT01090000260030.a.b.a.b.a.c.b Sailfin molly MODERN SPECIES 634 ARHGEF28 (ENSPLAG00000014795) #18 ENSPLAG00000014772 ENC1 (ENSPLAG00000014764) #19 hexb (ENSPLAG00000014763) #20 gfm2 (ENSPLAG00000014750) #21 nsa2 (ENSPLAG00000014684) #22 tor1 (ENSPLAG00000014655) tor1 (ENSPLAG00000014637) Amazon molly MODERN SPECIES 280 ENSPFOG00000010927 NPFFR2 (ENSPFOG00000010931) ENSPFOG00000010945 dck (ENSPFOG00000011348) mob1bb (ENSPFOG00000011395) TNPO1 (ENSPFOG00000011447) #9 fcho2 (ENSPFOG00000011692) #11 TMEM174 (ENSPFOG00000011952) #13 btf3 (ENSPFOG00000011979) ##15 foxd1 (ENSPFOG00000011960) ankra2 (ENSPFOG00000012023) #16 ARHGEF28 (ENSPFOG00000012124) #18 ENC1 (ENSPFOG00000012176) #19 hexb (ENSPFOG00000012191) #20 gfm2 (ENSPFOG00000012381) #21 nsa2 (ENSPFOG00000012512) #22 tor1 (ENSPFOG00000012543) egfl7 (ENSPFOG00000012611) agpat2 (ENSPFOG00000012638) FNBP1 (ENSPFOG00000012695) COL5A1 (ENSPFOG00000012917) olfm1a (ENSPFOG00000014850) ENSPFOG00000014898 mrps2 (ENSPFOG00000014903) dipk1b (ENSPFOG00000014908) dab2ipb (ENSPFOG00000014953) ttll11 (ENSPFOG00000014960) ENSPFOG00000022341 ENSPFOG00000020254 ENSPFOG00000015002 ENSPFOG00000024019 Guppy MODERN SPECIES 442 NPFFR2 (ENSPREG00000020572) SLC4A4 (ENSPREG00000020602) dck (ENSPREG00000020678) mob1bb (ENSPREG00000020689) TNPO1 (ENSPREG00000020705) #9 fcho2 (ENSPREG00000020776) #11 TMEM174 (ENSPREG00000020871) #13 foxd1 (ENSPREG00000020886) btf3 (ENSPREG00000020894) ##15 ankra2 (ENSPREG00000020906) #16 ENSPREG00000020919 #18 ENSPREG00000020933 #18 ENC1 (ENSPREG00000020971) #19 hexb (ENSPREG00000020991) #20 gfm2 (ENSPREG00000021026) #21 nsa2 (ENSPREG00000021068) #22 tor1 (ENSPREG00000021079) tor1 (ENSPREG00000021086) egfl7 (ENSPREG00000021100) agpat2 (ENSPREG00000021142) FNBP1 (ENSPREG00000021213) COL5A1 (ENSPREG00000021379) olfm1a (ENSPREG00000021493) ENSPREG00000021513 mrps2 (ENSPREG00000021519) dab2ipb (ENSPREG00000021572) ttll11 (ENSPREG00000021639) ENSPREG00000021648 ENSPREG00000021656 fibcd1b (ENSPREG00000021675) ENSPREG00000021690 Platyfish MODERN SPECIES 22 ENSXMAG00000025366 NPFFR2 (ENSXMAG00000026051) SLC4A4 (ENSXMAG00000005345) dck (ENSXMAG00000005412) mob1bb (ENSXMAG00000005427) TNPO1 (ENSXMAG00000005440) #9 fcho2 (ENSXMAG00000005481) #11 TMEM174 (ENSXMAG00000024151) #13 foxd1 (ENSXMAG00000009102) btf3 (ENSXMAG00000009089) ##15 ankra2 (ENSXMAG00000009076) #16 ARHGEF28 (ENSXMAG00000014765) #18 ENC1 (ENSXMAG00000023069) #19 hexb (ENSXMAG00000000795) #20 gfm2 (ENSXMAG00000000772) #21 nsa2 (ENSXMAG00000000762) #22 tor1 (ENSXMAG00000023565) tor1 (ENSXMAG00000028893) egfl7 (ENSXMAG00000005711) agpat2 (ENSXMAG00000021933) FNBP1 (ENSXMAG00000017879) ENSXMAG00000023352 ENSXMAG00000027308 COL5A1 (ENSXMAG00000017898) olfm1a (ENSXMAG00000022464) ENSXMAG00000026107 ENSXMAG00000018131 mrps2 (ENSXMAG00000018132) dipk1b (ENSXMAG00000000349) dab2ipb (ENSXMAG00000018135) ttll11 (ENSXMAG00000018150) NAME_4 ANCESTRAL SPECIES ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ##15 ENSGT00940000157156 #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000154427.A.d ENSGT01090000260030.a.b.a.b.a.c.b ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b Mummichog MODERN SPECIES 306 fcho2 (ENSFHEG00000005994) #11 TMEM174 (ENSFHEG00000006015) #13 foxd1 (ENSFHEG00000006027) btf3 (ENSFHEG00000006034) ##15 ankra2 (ENSFHEG00000006063) #16 ARHGEF28 (ENSFHEG00000006108) #18 ENC1 (ENSFHEG00000006127) #19 hexb (ENSFHEG00000006138) #20 gfm2 (ENSFHEG00000006210) #21 nsa2 (ENSFHEG00000000905) #22 tor1 (ENSFHEG00000006282) tor1 (ENSFHEG00000006311) egfl7 (ENSFHEG00000006462) agpat2 (ENSFHEG00000006472) Sheepshead minnow MODERN SPECIES 1110 FNBP1 (ENSCVAG00000009768) agpat2 (ENSCVAG00000009789) egfl7 (ENSCVAG00000009969) tor1 (ENSCVAG00000009976) gfm2 (ENSCVAG00000010057) #21 nsa2 (ENSCVAG00000010074) #22 hexb (ENSCVAG00000010091) #20 ENC1 (ENSCVAG00000010099) #19 Aplocheiloidei ANCESTRAL SPECIES 5 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b.a ##15 ENSGT00940000157156.o #16 ENSGT00940000157156.p #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 ENSGT00390000013846.a.a Mangrove rivulus MODERN SPECIES 150 ENC1 (ENSKMAG00000013378) #19 hexb (ENSKMAG00000013345) #20 gfm2 (ENSKMAG00000013277) #21 nsa2 (ENSKMAG00000013244) #22 tor1 (ENSKMAG00000013227) egfl7 (ENSKMAG00000013148) agpat2 (ENSKMAG00000013050) FNBP1 (ENSKMAG00000012784) ENSKMAG00000012699 ENSKMAG00000012663 olfm1a (ENSKMAG00000012620) ENSKMAG00000012579 mrps2 (ENSKMAG00000012557) dipk1b (ENSKMAG00000012539) ttll11 (ENSKMAG00000012516) dab2ipb (ENSKMAG00000012390) cldn5b (ENSKMAG00000012330) acads (ENSKMAG00000012280) Turquoise killifish MODERN SPECIES 1611 slc25a46 (ENSNFUG00015000558) ATP6V1G1 (ENSNFUG00015000529) slc31a1 (ENSNFUG00015000519) FKTN (ENSNFUG00015000481) ufc1 (ENSNFUG00015000466) ythdc1 (ENSNFUG00015000323) PRR14L (ENSNFUG00015000236) pisd (ENSNFUG00015000181) ENSNFUG00015000164 ENSNFUG00015020226 ENSNFUG00015019312 CDC26 (ENSNFUG00015019295) prpf4 (ENSNFUG00015019269) CU856539.1 (ENSNFUG00015018325) hexb (ENSNFUG00015017975) #20 NSA2 (ENSNFUG00015017855) #22 TOR1 (ENSNFUG00015017850) ENSNFUG00015017846 EGFL7 (ENSNFUG00015017837) AGPAT2 (ENSNFUG00015017832) FNBP1 (ENSNFUG00015017790) ENSNFUG00015017782 ENSNFUG00015016911 olfm1a (ENSNFUG00015016780) ENSNFUG00015016777 ENSNFUG00015016775 ENSNFUG00015016771 MRPS2 (ENSNFUG00015016767) dipk1b (ENSNFUG00015016713) TTLL11 (ENSNFUG00015016682) dab2ipb (ENSNFUG00015013236) Oryzias ANCESTRAL SPECIES 9 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b.b ##15 ENSGT00940000157156.m #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e.l ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 ENSGT00390000013846.a.a Oryzias_b ANCESTRAL SPECIES 4 ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b.b ##15 ENSGT00940000157156.m #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e.l.a.a ENSGT00950000182888.a.a.a.e.l.a.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 Indian medaka MODERN SPECIES 30 ENSOMEG00000014942 NPFFR2 (ENSOMEG00000014930) SLC4A4 (ENSOMEG00000014851) dck (ENSOMEG00000014621) mob1bb (ENSOMEG00000014587) TNPO1 (ENSOMEG00000014567) #9 fcho2 (ENSOMEG00000014430) #11 TMEM174 (ENSOMEG00000014273) #13 btf3 (ENSOMEG00000014241) ##15 foxd1 (ENSOMEG00000014209) ankra2 (ENSOMEG00000014199) #16 ARHGEF28 (ENSOMEG00000014109) #18 ENC1 (ENSOMEG00000013923) #19 hexb (ENSOMEG00000013880) #20 gfm2 (ENSOMEG00000013774) #21 nsa2 (ENSOMEG00000013689) #22 tor1 (ENSOMEG00000013661) tor1 (ENSOMEG00000013630) tor1 (ENSOMEG00000000697) tor1 (ENSOMEG00000013592) tor1 (ENSOMEG00000000734) egfl7 (ENSOMEG00000013528) agpat2 (ENSOMEG00000013414) FNBP1 (ENSOMEG00000013391) ENSOMEG00000013349 ENSOMEG00000013314 olfm1a (ENSOMEG00000013275) ENSOMEG00000013226 mrps2 (ENSOMEG00000013207) dipk1b (ENSOMEG00000013188) ttll11 (ENSOMEG00000013167) Javanese ricefish MODERN SPECIES 3 ENSOJAG00000017260 ENSOJAG00000017235 NPFFR2 (ENSOJAG00000017219) SLC4A4 (ENSOJAG00000014859) dck (ENSOJAG00000014618) mob1bb (ENSOJAG00000014572) TNPO1 (ENSOJAG00000013577) #9 fcho2 (ENSOJAG00000013199) #11 TMEM174 (ENSOJAG00000013157) #13 foxd1 (ENSOJAG00000013148) btf3 (ENSOJAG00000013079) ##15 ankra2 (ENSOJAG00000013011) #16 ARHGEF28 (ENSOJAG00000012916) #18 ENC1 (ENSOJAG00000012890) #19 ENSOJAG00000012801 #21 nsa2 (ENSOJAG00000012785) #22 tor1 (ENSOJAG00000012776) tor1 (ENSOJAG00000012750) egfl7 (ENSOJAG00000012729) agpat2 (ENSOJAG00000012718) FNBP1 (ENSOJAG00000012626) COL5A1 (ENSOJAG00000012526) olfm1a (ENSOJAG00000012455) ENSOJAG00000012439 mrps2 (ENSOJAG00000012422) dipk1b (ENSOJAG00000012407) ttll11 (ENSOJAG00000012352) dab2ipb (ENSOJAG00000010728) zgc:63972 (ENSOJAG00000010443) fibcd1b (ENSOJAG00000010429) ENSOJAG00000010299 Oryzias_a ANCESTRAL SPECIES 12 ENSGT00940000154886.a.b ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 #9 ENSGT00940000157105 #11 ENSGT00390000004161 #13 ENSGT00940000157140.b.a.b.b ENSGT00940000157156.m #16 ENSGT00940000155831.cb #18 ENSGT00950000182983.B.a.b.e #19 ENSGT00390000008107.c.a #20 ENSGT00550000074890.f #21 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.e.l ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ENSGT00940000166104 ENSGT00390000013846.a.a Japanese Medaka HdrR MODERN SPECIES 3 ENSORLG00000003038 NPFFR2 (ENSORLG00000003050) SLC4A4 (ENSORLG00000003072) dck (ENSORLG00000003108) mob1bb (ENSORLG00000003125) TNPO1 (ENSORLG00000003182) #9 fcho2 (ENSORLG00000003234) #11 TMEM174 (ENSORLG00000003242) #13 btf3 (ENSORLG00000003257) ##15 ENSORLG00000022026 ankra2 (ENSORLG00000003277) #16 ARHGEF28 (ENSORLG00000028035) #18 ENC1 (ENSORLG00000003288) #19 hexb (ENSORLG00000003323) #20 gfm2 (ENSORLG00000003360) #21 nsa2 (ENSORLG00000003379) #22 tor1 (ENSORLG00000003403) egfl7 (ENSORLG00000003417) agpat2 (ENSORLG00000003435) FNBP1 (ENSORLG00000003554) ENSORLG00000025318 COL5A1 (ENSORLG00000003591) olfm1a (ENSORLG00000025343) ENSORLG00000030208 mrps2 (ENSORLG00000003640) dipk1b (ENSORLG00000003651) ttll11 (ENSORLG00000003660) dab2ipb (ENSORLG00000003707) zgc:63972 (ENSORLG00000029795) ENSORLG00000027932 fibcd1b (ENSORLG00000003723) Chinese medaka MODERN SPECIES 753 zgc:162472 (ENSOSIG00000016546) dab2 (ENSOSIG00000016543) c9 (ENSOSIG00000016538) gas1b (ENSOSIG00000016536) fbp1b (ENSOSIG00000016535) ENSOSIG00000016533 ENSOSIG00000008374 mob1ba (ENSOSIG00000008338) TNPO1 (ENSOSIG00000007249) #9 fcho2 (ENSOSIG00000006476) #11 TMEM174 (ENSOSIG00000006467) #13 foxd1 (ENSOSIG00000006466) btf3 (ENSOSIG00000006465) ##15 ankra2 (ENSOSIG00000006464) #16 ENC1 (ENSOSIG00000006461) #19 nsa2 (ENSOSIG00000006456) #22 tor1 (ENSOSIG00000006455) egfl7 (ENSOSIG00000006448) agpat2 (ENSOSIG00000006447) FNBP1 (ENSOSIG00000004837) ENSOSIG00000004789 olfm1a (ENSOSIG00000004784) ENSOSIG00000004779 mrps2 (ENSOSIG00000004776) dipk1b (ENSOSIG00000004768) ttll11 (ENSOSIG00000004764) Tiger tail seahorse MODERN SPECIES 346 COL5A1 (ENSHCOG00000007659) ENSHCOG00000007683 FNBP1 (ENSHCOG00000007760) agpat2 (ENSHCOG00000007781) egfl7 (ENSHCOG00000007849) ENC1 (ENSHCOG00000007859) #19 hexb (ENSHCOG00000008136) #20 gfm2 (ENSHCOG00000008208) #21 nsa2 (ENSHCOG00000008385) #22 tor1 (ENSHCOG00000008396) ankra2 (ENSHCOG00000008411) #16 btf3 (ENSHCOG00000008425) ##15 foxd1 (ENSHCOG00000008430) ENSHCOG00000008445 #11 fcho2 (ENSHCOG00000008467) #11 mob1bb (ENSHCOG00000008488) dck (ENSHCOG00000008518) SLC4A4 (ENSHCOG00000012083) ENSHCOG00000012348 ENSHCOG00000012379 mzt2b (ENSHCOG00000012386) lhx5 (ENSHCOG00000012399) HMGCR (ENSHCOG00000012477) #28 ENSHCOG00000000356 Otomorpha ANCESTRAL SPECIES 305 ENSGT00950000183190.a.b.b ENSGT00390000005742 ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.h Otophysi ANCESTRAL SPECIES 124 ENSGT00950000183190.a.b.b ENSGT00390000005742 ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.h ENSGT00940000157310 Characiphysae ANCESTRAL SPECIES 68 ENSGT00950000183190.a.b.b ENSGT00390000005742 ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.h ENSGT00940000157310 ENSGT00940000161345 ENSGT00940000166931 ENSGT00940000163205.d ENSGT01020000230351.D.a.a.a ENSGT00950000182989.D.a.b ENSGT00940000159585 ENSGT00390000015020 ENSGT00940000159721.h ENSGT00510000048902.a.f #24 ENSGT00940000166328 ENSGT00390000014845 ENSGT00670000099470 ENSGT00940000165531.b.b Channel catfish MODERN SPECIES 9 NUP188 (ENSIPUG00000007115) dolk (ENSIPUG00000007099) phyhd1 (ENSIPUG00000007062) Lrrc8a (ENSIPUG00000007037) dnlz (ENSIPUG00000007022) ENSIPUG00000007004 uck1 (ENSIPUG00000006985) rapgef1b (ENSIPUG00000006801) NTNG2 (ENSIPUG00000006764) setx (ENSIPUG00000006685) dolpp1 (ENSIPUG00000006634) fam73b (ENSIPUG00000006553) St6galnac3 (ENSIPUG00000006524) st6galnac6 (ENSIPUG00000006510) spout1 (ENSIPUG00000006486) nsa2 (ENSIPUG00000006440) #22 tor1 (ENSIPUG00000006420) Scamp1 (ENSIPUG00000006389) CHCHD10 (ENSIPUG00000006362) ddt (ENSIPUG00000006353) gstt1b (ENSIPUG00000006312) p2rx4a (ENSIPUG00000006157) idh3b (ENSIPUG00000006085) ptpra (ENSIPUG00000005987) gnrh2 (ENSIPUG00000005968) gcnt4 (ENSIPUG00000005958) cdk5rap2 (ENSIPUG00000005846) ENSIPUG00000005821 camsap1a (ENSIPUG00000005748) notch1a (ENSIPUG00000005717) KCNT1 (ENSIPUG00000005645) Characiphysae_b ANCESTRAL SPECIES 73 ENSGT00950000183190.a.b.b ENSGT00390000005742 ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.h ENSGT00940000157310 ENSGT00940000161345 ENSGT00940000166931 ENSGT00940000163205.d ENSGT01020000230351.D.a.a.a ENSGT01020000230351.D.a.a.b ENSGT00950000182989.D.a.b ENSGT00940000159585 ENSGT00390000015020 ENSGT00940000159721.h ENSGT00510000048902.a.f #24 ENSGT00940000166328 ENSGT00390000014845 ENSGT00670000099470 Electric eel MODERN SPECIES 801 dolpp1 (ENSEEEG00000006435) miga2 (ENSEEEG00000006437) st6galnac4 (ENSEEEG00000006441) ST6GALNAC6 (ENSEEEG00000006443) spout1 (ENSEEEG00000006447) nsa2 (ENSEEEG00000006508) #22 tor1 (ENSEEEG00000006509) scamp1 (ENSEEEG00000006511) chchd10 (ENSEEEG00000006514) ddt (ENSEEEG00000006517) gstt1b (ENSEEEG00000006519) p2rx4a (ENSEEEG00000006523) dolk (ENSEEEG00000006527) NUP188 (ENSEEEG00000006530) Characoidei ANCESTRAL SPECIES 67 ENSGT00950000183190.a.b.b ENSGT00390000005742 ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.h ENSGT00940000157310 ENSGT00940000161345 ENSGT00940000166931 ENSGT00940000163205.d ENSGT01020000230351.D.a.a.a ENSGT01020000230351.D.a.a.b ENSGT00950000182989.D.a.b ENSGT00940000159585 ENSGT00390000015020 ENSGT00940000159721.h ENSGT00510000048902.a.f #24 ENSGT00940000166328 ENSGT00390000014845 ENSGT00670000099470 Red-bellied piranha MODERN SPECIES 625 dolpp1 (ENSPNAG00000005741) miga2 (ENSPNAG00000016297) st6galnac4 (ENSPNAG00000016286) ST6GALNAC6 (ENSPNAG00000016281) spout1 (ENSPNAG00000016265) nsa2 (ENSPNAG00000016263) #22 tor1 (ENSPNAG00000016241) scamp1 (ENSPNAG00000016232) chchd10 (ENSPNAG00000016214) ddt (ENSPNAG00000016205) gstt1b (ENSPNAG00000016186) p2rx4a (ENSPNAG00000016175) idh3b (ENSPNAG00000016090) ptpra (ENSPNAG00000016040) gnrh2 (ENSPNAG00000015527) GCNT4 (ENSPNAG00000003390) Mexicana tetra MODERN SPECIES 5 dnlz (ENSAMXG00000032493) uck1 (ENSAMXG00000014494) rapgef1b (ENSAMXG00000014464) NTNG2 (ENSAMXG00000042670) ENSAMXG00000040804 ENSAMXG00000038676 ENSAMXG00000029525 ENSAMXG00000030011 SETX (ENSAMXG00000014406) dolpp1 (ENSAMXG00000032913) miga2 (ENSAMXG00000014369) st6galnac4 (ENSAMXG00000040179) ST6GALNAC6 (ENSAMXG00000014345) spout1 (ENSAMXG00000014331) ENSAMXG00000034097 nsa2 (ENSAMXG00000033155) #22 tor1 (ENSAMXG00000014304) scamp1 (ENSAMXG00000040128) chchd10 (ENSAMXG00000014252) ddt (ENSAMXG00000031381) gstt1b (ENSAMXG00000033673) gstt1b (ENSAMXG00000035085) p2rx4a (ENSAMXG00000014206) gstt1b (ENSAMXG00000014181) idh3b (ENSAMXG00000035220) ptpra (ENSAMXG00000014133) gnrh2 (ENSAMXG00000014101) GCNT4 (ENSAMXG00000026353) ENSAMXG00000014081 #24 lhx5 (ENSAMXG00000035790) mzt2b (ENSAMXG00000031932) Cyprinoidei ANCESTRAL SPECIES 102 ENSGT00950000183190.a.b.b ENSGT00390000005742 ENSGT00390000004067 ENSGT00390000006287 ENSGT00940000154043.A.j.b ENSGT00390000008220 ENSGT01020000230412.A.c.a ENSGT00940000156235.c.a ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.h ENSGT00940000157310 ENSGT00940000158002 ENSGT00390000008772 ENSGT00940000159872 ENSGT00940000153432.A.b ENSGT00940000159814 ENSGT00940000154735.c ENSGT00940000154461.tc.b ENSGT01050000244887.A.b.b ENSGT00950000182870.a.a.a.b.k ENSGT00950000182971.C.pc.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 568 ENSGT00950000183190.a.b.b.a ENSGT00390000005742.v ENSGT00390000004067.i ENSGT00390000006287.m ENSGT00940000154043.A.j.b.c.b ENSGT00390000008220.e.b ENSGT01020000230412.A.c.a.e ENSGT00940000156235.c.a.e ENSGT00940000153601.a.a.e.b.a.g ENSGT00940000160918.b ENSGT00390000013112.b ENSGT00390000008565.a.q ENSGT00940000157958.h ENSGT00940000160114.i ENSGT00390000016537.n ENSGT00390000018706.i #22 ENSGT00950000182888.a.a.a.h.a.a Cyprininae_a ANCESTRAL SPECIES 227 ENSGT00950000182975.a.a.b.l.e ENSGT00950000183190.a.b.b.b ENSGT00390000005742.u.a ENSGT00390000004067.j ENSGT00390000006287.n ENSGT00940000154043.A.i ENSGT01020000230412.A.c.a.f ENSGT00940000156235.c.a.f ENSGT00940000153601.a.a.e.b.a.h ENSGT00940000160918.a ENSGT00390000013112.a ENSGT00390000008565.a.r ENSGT00940000157958.g ENSGT00940000160114.j ENSGT00390000016537.n ENSGT00390000018706.i #22 ENSGT00950000182888.a.a.a.h.a.a ENSGT00950000182888.a.a.a.h.a.b.b.b ENSGT00940000157310.f ENSGT00940000158002.r ENSGT00390000008772.m.a ENSGT00940000159872.d ENSGT00940000153432.A.b.e ENSGT00940000159814.e ENSGT00940000154735.c.d ENSGT00940000154461.tc.b.a ENSGT01050000244887.A.b.b.c ENSGT00950000182870.a.a.a.b.k.b ENSGT00950000182971.C.pc.b ENSGT00940000178682 ENSGT00940000159594.c Golden-line barbel MODERN SPECIES 264 dolk (ENSSGRG00000026028) phyhd1 (ENSSGRG00000026030) ENSSGRG00000026038 ENSSGRG00000026039 dnlz (ENSSGRG00000026042) uck1 (ENSSGRG00000026048) rapgef1b (ENSSGRG00000026145) NTNG2 (ENSSGRG00000026181) ENSSGRG00000026242 dolpp1 (ENSSGRG00000026244) miga2 (ENSSGRG00000026247) st6galnac4 (ENSSGRG00000026259) st6galnac4 (ENSSGRG00000026261) ST6GALNAC6 (ENSSGRG00000026262) spout1 (ENSSGRG00000026268) nsa2 (ENSSGRG00000026296) #22 tor1 (ENSSGRG00000026302) tor1 (ENSSGRG00000026304) scamp1 (ENSSGRG00000026306) ENSSGRG00000026308 DYM (ENSSGRG00000026419) smad7 (ENSSGRG00000026624) CTIF (ENSSGRG00000026625) ZBTB7C (ENSSGRG00000026626) hnrnpabb (ENSSGRG00000026627) RACK1 (ENSSGRG00000026628) ENSSGRG00000027006 S1PR3 (ENSSGRG00000027008) SHC3 (ENSSGRG00000027011) Common carp reference MODERN SPECIES 38 camsap1a (ENSCCRG00000017875) ENSCCRG00000058198 ENSCCRG00000017073 cdk5rap2 (ENSCCRG00000017077) NUP188 (ENSCCRG00000017126) dolk (ENSCCRG00000077966) phyhd1 (ENSCCRG00000082685) rapgef1b (ENSCCRG00000014375) uck1 (ENSCCRG00000073756) NTNG2 (ENSCCRG00000062829) ENSCCRG00000017973 dolpp1 (ENSCCRG00000037753) miga2 (ENSCCRG00000037756) st6galnac4 (ENSCCRG00000067085) ENSCCRG00000039773 nsa2 (ENSCCRG00000028864) #22 tor1 (ENSCCRG00000055539) scamp1 (ENSCCRG00000079310) ENSCCRG00000003856 DYM (ENSCCRG00000074126) smad7 (ENSCCRG00000061526) CTIF (ENSCCRG00000071713) ZBTB7C (ENSCCRG00000057156) hnrnpabb (ENSCCRG00000079704) ENSCCRG00000048766 ENSCCRG00000059461 S1PR3 (ENSCCRG00000070584) SHC3 (ENSCCRG00000041066) zgc:86839 (ENSCCRG00000051232) SEMA4D (ENSCCRG00000050922) SV2C (ENSCCRG00000062771) #35 Goldfish DUPLICATION Goldfish MODERN SPECIES 3263 st6galnac4 (ENSCARG00000055131) ST6GALNAC6 (ENSCARG00000055048) nsa2 (ENSCARG00000055015) #22 tor1 (ENSCARG00000054997) Goldfish MODERN SPECIES 40 ENSCARG00000035730 cdk5rap2 (ENSCARG00000035830) NUP188 (ENSCARG00000036053) dolk (ENSCARG00000036924) phyhd1 (ENSCARG00000036947) lrrc8aa (ENSCARG00000037273) dnlz (ENSCARG00000037291) uck1 (ENSCARG00000037311) rapgef1b (ENSCARG00000037541) NTNG2 (ENSCARG00000041225) ENSCARG00000041235 dolpp1 (ENSCARG00000041252) miga2 (ENSCARG00000041281) st6galnac4 (ENSCARG00000039859) ST6GALNAC6 (ENSCARG00000039862) nsa2 (ENSCARG00000039873) #22 tor1 (ENSCARG00000039883) scamp1 (ENSCARG00000039896) ATP8B1 (ENSCARG00000039939) DYM (ENSCARG00000040337) smad7 (ENSCARG00000040507) CTIF (ENSCARG00000040569) ZBTB7C (ENSCARG00000040609) hnrnpabb (ENSCARG00000040624) RACK1 (ENSCARG00000040657) S1PR3 (ENSCARG00000041118) SHC3 (ENSCARG00000041136) zgc:86839 (ENSCARG00000041272) SEMA4D (ENSCARG00000041331) ENSCARG00000042376 #35 CERT1 (ENSCARG00000042584) #29 Cyprininae ANCESTRAL SPECIES 221 ENSGT00390000016537.m ENSGT00390000018706.j #22 ENSGT00950000182888.a.a.a.h.a.b.a ENSGT00940000157310.e ENSGT00940000158002.q ENSGT00390000008772.n ENSGT00940000159872.c ENSGT00940000153432.A.b.f ENSGT00940000159814.f ENSGT00940000154735.c.c ENSGT00940000154461.tc.b.b.b ENSGT00950000182870.a.a.a.b.k.a ENSGT00950000182971.C.pc.a ENSGT00940000159594.d ENSGT00950000182940.b.b.f.g #35 ENSGT00940000155123.b.b.a #29 ENSGT00940000155305.b.b.a #28 Goldfish MODERN SPECIES 13 dolk (ENSCARG00000041164) ENSCARG00000041169 cdk5rap2 (ENSCARG00000041213) cdk9 (ENSCARG00000041466) ENSCARG00000041540 dolk (ENSCARG00000041556) phyhd1 (ENSCARG00000041574) lrrc8aa (ENSCARG00000041793) dnlz (ENSCARG00000041820) uck1 (ENSCARG00000041870) COL5A1 (ENSCARG00000041897) ENSCARG00000008533 miga2 (ENSCARG00000008549) ST6GALNAC6 (ENSCARG00000008562) spout1 (ENSCARG00000008610) nsa2 (ENSCARG00000008670) #22 tor1 (ENSCARG00000008729) ENSCARG00000008763 ENSCARG00000008771 dolpp1 (ENSCARG00000008803) miga2 (ENSCARG00000008835) scamp1 (ENSCARG00000008856) ENSCARG00000008901 ENSCARG00000009069 DYM (ENSCARG00000009079) smad7 (ENSCARG00000009133) CTIF (ENSCARG00000009140) ENSCARG00000009145 hwa (ENSCARG00000009147) ENSCARG00000009156 st8sia5 (ENSCARG00000009177) Cyprininae_a ANCESTRAL SPECIES 240 ENSGT00390000004067.i ENSGT00390000006287.m ENSGT00940000154043.A.j.b.d ENSGT00940000154043.A.j.b.c.a ENSGT00390000008220.e.a ENSGT00390000008220.e.b ENSGT01020000230412.A.c.a.e ENSGT00940000156235.c.a.e ENSGT00940000153601.a.a.e.b.a.g ENSGT00940000160918.b ENSGT00390000013112.b ENSGT00390000008565.a.q ENSGT00940000157958.h ENSGT00940000160114.i ENSGT00390000016537.m ENSGT00390000018706.j #22 ENSGT00950000182888.a.a.a.h.a.b.a ENSGT00950000182888.a.a.a.h.a.b.b.a ENSGT00940000157310.e ENSGT00940000158002.q ENSGT00390000008772.n ENSGT00940000159872.c ENSGT00940000153432.A.b.f ENSGT00940000159814.f ENSGT00940000154735.c.c ENSGT00940000154461.tc.b.b.b ENSGT01050000244887.A.b.b.d ENSGT00950000182870.a.a.a.b.k.a ENSGT00950000182971.C.pc.a ENSGT00940000159594.d ENSGT00950000182940.b.b.f.g #35 Common carp reference MODERN SPECIES 45 ENSCCRG00000020126 cdk5rap2 (ENSCCRG00000000618) NUP188 (ENSCCRG00000040401) dolk (ENSCCRG00000082757) phyhd1 (ENSCCRG00000067601) lrrc8aa (ENSCCRG00000072268) dnlz (ENSCCRG00000039290) uck1 (ENSCCRG00000044796) rapgef1b (ENSCCRG00000048325) NTNG2 (ENSCCRG00000068996) SETX (ENSCCRG00000081183) dolpp1 (ENSCCRG00000048407) miga2 (ENSCCRG00000048412) ENSCCRG00000015671 spout1 (ENSCCRG00000028874) nsa2 (ENSCCRG00000039734) #22 tor1 (ENSCCRG00000007313) tor1 (ENSCCRG00000075223) tor1 (ENSCCRG00000035266) ENSCCRG00000044411 scamp1 (ENSCCRG00000046834) ENSCCRG00000003835 DYM (ENSCCRG00000079172) smad7 (ENSCCRG00000079215) CTIF (ENSCCRG00000061138) ZBTB7C (ENSCCRG00000075877) hnrnpabb (ENSCCRG00000082905) ENSCCRG00000036236 S1PR3 (ENSCCRG00000019776) SHC3 (ENSCCRG00000079038) zgc:86839 (ENSCCRG00000078400) Golden-line barbel MODERN SPECIES 72 phyhd1 (ENSSGRG00000046493) lrrc8aa (ENSSGRG00000046607) ENSSGRG00000046608 dnlz (ENSSGRG00000046610) uck1 (ENSSGRG00000046611) rapgef1b (ENSSGRG00000046641) NTNG2 (ENSSGRG00000046667) ENSSGRG00000046668 ENSSGRG00000046669 SETX (ENSSGRG00000046672) dolpp1 (ENSSGRG00000046707) miga2 (ENSSGRG00000046749) st6galnac4 (ENSSGRG00000046753) ST6GALNAC6 (ENSSGRG00000046755) spout1 (ENSSGRG00000046756) nsa2 (ENSSGRG00000046896) #22 tor1 (ENSSGRG00000046901) tor1 (ENSSGRG00000046902) scamp1 (ENSSGRG00000046903) ATP8B1 (ENSSGRG00000046908) DYM (ENSSGRG00000047140) smad7 (ENSSGRG00000047143) ENSSGRG00000047151 CTIF (ENSSGRG00000047152) ZBTB7C (ENSSGRG00000047154) hnrnpabb (ENSSGRG00000047156) RACK1 (ENSSGRG00000047158) S1PR3 (ENSSGRG00000047160) SHC3 (ENSSGRG00000047162) ENSSGRG00000047168 SV2C (ENSSGRG00000047225) #35 Zebrafish MODERN SPECIES 13 ENSDARG00000114455 HTRA2 (ENSDARG00000092133) ENSDARG00000114965 HTRA2 (ENSDARG00000094995) lrrc8aa (ENSDARG00000032188) dnlz (ENSDARG00000068655) uck1 (ENSDARG00000022218) rapgef1b (ENSDARG00000015971) NTNG2 (ENSDARG00000087100) ENSDARG00000022996 dolpp1 (ENSDARG00000036915) miga2 (ENSDARG00000089357) st6galnac4 (ENSDARG00000100804) ST6GALNAC6 (ENSDARG00000036913) spout1 (ENSDARG00000019707) nsa2 (ENSDARG00000007708) #22 tor1 (ENSDARG00000077950) scamp1 (ENSDARG00000036911) ATP8B1 (ENSDARG00000060980) DYM (ENSDARG00000042555) smad7 (ENSDARG00000016858) CTIF (ENSDARG00000090617) ZBTB7C (ENSDARG00000100985) hnrnpabb (ENSDARG00000099865) SHC3 (ENSDARG00000098909) ENSDARG00000116283 CKS2 (ENSDARG00000117089) zgc:194215 (ENSDARG00000105690) znf971 (ENSDARG00000105834) ENSDARG00000099984 ENSDARG00000067801 Clupeiformes ANCESTRAL SPECIES 105 ENSGT00900000141021.b.a.d.a ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a ENSGT00940000160451 ENSGT00940000154645.B.e ENSGT00930000151016 ENSGT00940000155946.c.b ENSGT00940000154079.b.b ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 ENSGT00940000160114 ENSGT00390000016537 ENSGT00390000018706 #22 ENSGT00950000182888.a.a.a.h Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 3 ENSCHAG00000025652 ENSCHAG00000025721 tor1 (ENSCHAG00000025847) nsa2 (ENSCHAG00000025862) #22 spout1 (ENSCHAG00000025865) ENSCHAG00000025891 rpl28 (ENSCHAG00000025897) pdcl (ENSCHAG00000025906) rpl37 (ENSCHAG00000025911) st8sia5 (ENSCHAG00000025920) ENSCHAG00000025936 LOXHD1 (ENSCHAG00000025959) zgc:77838 (ENSCHAG00000025971) ENSCHAG00000025974 spout1 (ENSCHAG00000025977) nsa2 (ENSCHAG00000025990) #22 tor1 (ENSCHAG00000025993) ST6GALNAC6 (ENSCHAG00000025999) miga2 (ENSCHAG00000026011) dolpp1 (ENSCHAG00000026063) ENSCHAG00000026067 ENSCHAG00000026083 zbtb43 (ENSCHAG00000002356) RALGPS1 (ENSCHAG00000002473) angptl2a (ENSCHAG00000003585) fbxw2 (ENSCHAG00000003600) ncs1a (ENSCHAG00000003645) gpr107 (ENSCHAG00000003724) crata (ENSCHAG00000003848) ptpa (ENSCHAG00000004320) ier5l (ENSCHAG00000004832) Atlantic herring MODERN SPECIES 3 miga2 (ENSCHAG00000026011) ST6GALNAC6 (ENSCHAG00000025999) tor1 (ENSCHAG00000025993) nsa2 (ENSCHAG00000025990) #22 spout1 (ENSCHAG00000025977) ENSCHAG00000025974 zgc:77838 (ENSCHAG00000025971) LOXHD1 (ENSCHAG00000025959) ENSCHAG00000025936 st8sia5 (ENSCHAG00000025920) rpl37 (ENSCHAG00000025911) pdcl (ENSCHAG00000025906) rpl28 (ENSCHAG00000025897) ENSCHAG00000025891 spout1 (ENSCHAG00000025865) nsa2 (ENSCHAG00000025862) #22 tor1 (ENSCHAG00000025847) ENSCHAG00000025721 ENSCHAG00000025652 hwa (ENSCHAG00000025643) zgc:122979 (ENSCHAG00000025640) thbs4b (ENSCHAG00000023900) ptges (ENSCHAG00000023799) usp20 (ENSCHAG00000022910) zgc:103692 (ENSCHAG00000022825) med22 (ENSCHAG00000022804) RPL7A (ENSCHAG00000022761) ENSCHAG00000022753 surf1 (ENSCHAG00000022743) kyat1 (ENSCHAG00000022602) prkaa1 (ENSCHAG00000022395) Denticle herring MODERN SPECIES 13 ENSDCDG00000013232 psmd5 (ENSDCDG00000013227) ENSDCDG00000013225 ENSDCDG00000013222 egfl7 (ENSDCDG00000013200) agpat2 (ENSDCDG00000013192) ENSDCDG00000013188 ENSDCDG00000013183 NTNG2 (ENSDCDG00000013171) ENSDCDG00000013160 dolpp1 (ENSDCDG00000013148) miga2 (ENSDCDG00000013121) st6galnac4 (ENSDCDG00000013111) ST6GALNAC6 (ENSDCDG00000013067) spout1 (ENSDCDG00000013004) nsa2 (ENSDCDG00000012992) #22 tor1 (ENSDCDG00000012982) notch1a (ENSDCDG00000012926) camsap1a (ENSDCDG00000012916) ENSDCDG00000011796 ENSDCDG00000011754 rpl28 (ENSDCDG00000011753) pdcl (ENSDCDG00000011751) rpl37 (ENSDCDG00000011745) st8sia5 (ENSDCDG00000011738) atp5fa1 (ENSDCDG00000010991) haus1 (ENSDCDG00000010956) zgc:77838 (ENSDCDG00000010949) RNF165 (ENSDCDG00000010944) LOXHD1 (ENSDCDG00000010896) f2rl1.1 (ENSDCDG00000010882) ##36 Spotted gar MODERN SPECIES 658 WDR54 (ENSLOCG00000005095) rhobtb4 (ENSLOCG00000005114) ENSLOCG00000005134 ENSLOCG00000005151 rtknb (ENSLOCG00000005167) ENSLOCG00000005189 fam151b (ENSLOCG00000005204) ankrd34bb (ENSLOCG00000017523) dhfr (ENSLOCG00000005217) msh3 (ENSLOCG00000005233) rasgrf2b (ENSLOCG00000005270) ckmt2a (ENSLOCG00000005314) zcchc9 (ENSLOCG00000005331) ACOT12 (ENSLOCG00000005352) gfm2 (ENSLOCG00000005368) #21 nsa2 (ENSLOCG00000005380) #22 FAM169A (ENSLOCG00000005396) #24 gcnt4a (ENSLOCG00000017524) ENSLOCG00000005414 #27 hmgcra (ENSLOCG00000005433) #28 CERT1 (ENSLOCG00000005451) #29 POLK (ENSLOCG00000005477) #30 ANKDD1B (ENSLOCG00000005494) #31 ENSLOCG00000005510 sv2ca (ENSLOCG00000005520) #35 iqgap2 (ENSLOCG00000005540) ##37 F2RL2 (ENSLOCG00000017525) #36 F2R (ENSLOCG00000017526) ##36 F2R (ENSLOCG00000017527) ##36 F2R (ENSLOCG00000017528) ##36 F2RL1 (ENSLOCG00000005575) ##36 Reedfish MODERN SPECIES 15 ZNF366 (ENSECRG00000014973) #7 TNPO1 (ENSECRG00000015056) #9 ENSECRG00000015371 fcho2 (ENSECRG00000015407) #11 ENSECRG00000015487 #12 foxd1 (ENSECRG00000015501) btf3 (ENSECRG00000015527) ##15 ENSECRG00000015562 ankra2 (ENSECRG00000015581) #16 utp15 (ENSECRG00000015619) #17 ARHGEF28 (ENSECRG00000015680) #18 ENSECRG00000015810 ENC1 (ENSECRG00000015826) #19 hexb (ENSECRG00000015849) #20 gfm2 (ENSECRG00000015932) #21 nsa2 (ENSECRG00000016209) #22 FAM169A (ENSECRG00000016228) #24 gcnt4a (ENSECRG00000016254) ENSECRG00000016271 hmgcra (ENSECRG00000016297) #28 CERT1 (ENSECRG00000016356) #29 POLK (ENSECRG00000016538) #30 ANKDD1B (ENSECRG00000016596) #31 ENSECRG00000016654 ENSECRG00000016683 ENSECRG00000016694 sv2ca (ENSECRG00000016710) #35 iqgap2 (ENSECRG00000016760) ##37 F2RL2 (ENSECRG00000004843) #36 f2r2.1 (ENSECRG00000004853) ##36 f2rl1.1 (ENSECRG00000004864) ##36