Hystricomorpha	ANCESTRAL SPECIES	31	ENSGT00390000009329.b	ENSGT00940000155498	ENSGT01100000263506.b.b	ENSGT00940000155389.h	ENSGT00940000157105	ENSGT00390000017024	ENSGT00390000004161	ENSGT00940000157140.b.a.b.b	ENSGT00940000153288.a.b.a.b #14	ENSGT00940000157156 #15	ENSGT00390000004228 #16	ENSGT00940000155831 #17	ENSGT00950000182983.B.a.b #19	ENSGT00390000008107.c.a #20	ENSGT00550000074890 #21	ENSGT00390000018706.m.b.a #22	ENSGT00510000048902.a #23	ENSGT00940000159721 #31	ENSGT00940000162618 #27	ENSGT00940000155305 #26	ENSGT00940000155123.b #25	ENSGT00940000156667 #32	ENSGT00940000154170.A #34	ENSGT00390000004454	ENSGT00950000182940.b.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362
Naked mole-rat female	MODERN SPECIES	7	RGR (ENSHGLG00000010499) #7	ENSHGLG00000032139 #8	CCSER2 (ENSHGLG00000008612) #9	GRID1 (ENSHGLG00000009129) #10	ENSHGLG00000007130 #11	ENSHGLG00000006795 #12	ENSHGLG00000045643 #13	ENSHGLG00000001304 #14	ENSHGLG00000000772 #15	UTP15 (ENSHGLG00000000745) #16	ARHGEF28 (ENSHGLG00000000602) #17	ENSHGLG00000040928 #18	ENC1 (ENSHGLG00000000552) #19	Hexb (ENSHGLG00000000527) #20	GFM2 (ENSHGLG00000000419) #21	NSA2 (ENSHGLG00000000324) #22	ENSHGLG00000035328 #23	ENSHGLG00000032803 #24	ENSHGLG00000000294 #25	ENSHGLG00000000270 #26	ANKRD31 (ENSHGLG00000000230) #27	ENSHGLG00000043427 #28	ENSHGLG00000040348 #29	ENSHGLG00000000135 #30	ENSHGLG00000034320 #31	ENSHGLG00000002129 #32	ENSHGLG00000036754 #33	ENSHGLG00000002239 #34	ENSHGLG00000040666 #35	ENSHGLG00000035363 #36	ENSHGLG00000001390 #37
Hystricomorpha_a	ANCESTRAL SPECIES	72			ENSGT01100000263506.b.b	ENSGT00940000155389.h	ENSGT00940000157105	ENSGT00390000017024	ENSGT00390000004161	ENSGT00940000157140.b.a.b.b	ENSGT00940000153288.a.b.a.b #14	ENSGT00940000157156 #15	ENSGT00390000004228 #16	ENSGT00940000155831 #17	ENSGT00950000182983.B.a.b #19	ENSGT00390000008107.c.a #20	ENSGT00550000074890 #21	ENSGT00390000018706.m.b.a #22	ENSGT00510000048902.a #23	ENSGT00940000159721 #31	ENSGT00940000162618 #27	ENSGT00940000155305 #26	ENSGT00940000155123.b #25	ENSGT00940000156667 #32	ENSGT00940000154170.A #34	ENSGT00390000004454	ENSGT00950000182940.b.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362
Guinea pig	MODERN SPECIES	163		ENSCPOG00000020216	TNPO1 (ENSCPOG00000003540)	FCHO2 (ENSCPOG00000005442)	TMEM171 (ENSCPOG00000019983)	TMEM174 (ENSCPOG00000002881)	ENSCPOG00000035195	ENSCPOG00000012832 #14	ANKRA2 (ENSCPOG00000006571) #15	UTP15 (ENSCPOG00000006669) #16	ARHGEF28 (ENSCPOG00000006680) #17	ENC1 (ENSCPOG00000004353) #19	ENSCPOG00000023166	HEXB (ENSCPOG00000006324) #20	GFM2 (ENSCPOG00000006332) #21	NSA2 (ENSCPOG00000030702) #22	FAM169A (ENSCPOG00000025740) #23
Hystricomorpha_b	ANCESTRAL SPECIES	95					ENSGT00940000155389.h	ENSGT00940000157105	ENSGT00390000017024	ENSGT00390000004161	ENSGT00940000153288.a.b.a.a ##14	ENSGT00940000157156 #15	ENSGT00390000004228 #16	ENSGT00940000155831 #17	ENSGT00950000182983.B.a.b #19	ENSGT00390000008107.c.a #20	ENSGT00550000074890 #21	ENSGT00390000018706.m.b.a #22	ENSGT00510000048902.a #23	ENSGT00940000159721 #31	ENSGT00940000162618 #27	ENSGT00940000155305 #26	ENSGT00940000155123.b #25	ENSGT00940000156667 #32	ENSGT00940000154170.A #34	ENSGT00390000004454	ENSGT00950000182940.b.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121
Degu	DUPLICATION
Degu	MODERN SPECIES	245	ENSODEG00000018607	ENSODEG00000000593	SOX11 (ENSODEG00000000568)	CMPK2 (ENSODEG00000000539)	RSAD2 (ENSODEG00000000506)	RNF144A (ENSODEG00000000489)	ID2 (ENSODEG00000000480)	KIDINS220 (ENSODEG00000000415)	MBOAT2 (ENSODEG00000000353)	SNTG2 (ENSODEG00000000324)	TPO (ENSODEG00000000292)	TMEM18 (ENSODEG00000000266)	ALKAL2 (ENSODEG00000000931)	ACP1 (ENSODEG00000000890)	ENSODEG00000000841	ENSODEG00000018660 #22
Degu	MODERN SPECIES	303										ENSODEG00000000925	ENSODEG00000018693	ENSODEG00000000904	ENSODEG00000001578	AKAP9 (ENSODEG00000001339)	CYP51A1 (ENSODEG00000001187)	ENSODEG00000001141 #22	KRIT1 (ENSODEG00000001084)	ANKIB1 (ENSODEG00000001042)	ENSODEG00000000916	ENSODEG00000000896	PEX1 (ENSODEG00000001278)	ENSODEG00000001236	ENSODEG00000001167	CDK6 (ENSODEG00000001138)	ENSODEG00000001113	HEPACAM2 (ENSODEG00000001098)	VPS50 (ENSODEG00000001066)	CALCR (ENSODEG00000001037)	ENSODEG00000001006	TFPI2 (ENSODEG00000000988)	GNGT1 (ENSODEG00000000972)
Long-tailed chinchilla	MODERN SPECIES	132					TNPO1 (ENSCLAG00000016191)	FCHO2 (ENSCLAG00000009654)	TMEM171 (ENSCLAG00000009754)	TMEM174 (ENSCLAG00000009686)	BTF3 (ENSCLAG00000014499) ##14	ANKRA2 (ENSCLAG00000013134) #15	UTP15 (ENSCLAG00000016531) #16	ARHGEF28 (ENSCLAG00000011926) #17	ENC1 (ENSCLAG00000010345) #19	HEXB (ENSCLAG00000016006) #20	GFM2 (ENSCLAG00000013440) #21	NSA2 (ENSCLAG00000010179) #22	FAM169A (ENSCLAG00000009619) #23	ENSCLAG00000011385	GCNT4 (ENSCLAG00000010436) #31	ENSCLAG00000009641	ANKRD31 (ENSCLAG00000011065) #27	HMGCR (ENSCLAG00000010132) #26	CERT1 (ENSCLAG00000011527) #25	POLK (ENSCLAG00000011236) #32	ANKDD1B (ENSCLAG00000010494) #34	POC5 (ENSCLAG00000009830)	SV2C (ENSCLAG00000013949)	F2RL2 (ENSCLAG00000012739)	IQGAP2 (ENSCLAG00000011435)	F2RL1 (ENSCLAG00000010304)	S100Z (ENSCLAG00000010354)