Euteleostomi ANCESTRAL SPECIES 180 ENSGT00940000159581 #18 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000164558 ENSGT00940000163557.C ENSGT00940000159308 ENSGT00940000164076.a.b ENSGT00940000164160 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 Sarcopterygii ANCESTRAL SPECIES 202 ENSGT00940000159581 #18 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00970000197161 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000164558 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 Tetrapoda ANCESTRAL SPECIES 1 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT00940000159581 #18 ENSGT00970000197866 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000164558 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 Amniota ANCESTRAL SPECIES 3 ENSGT00940000153837.a.a ENSGT00940000162943 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT00450000040324.a ENSGT00940000159581 #18 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00970000197866 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Mammalia ANCESTRAL SPECIES 3 ENSGT00940000161506 ENSGT00730000111514 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000177637 ENSGT00940000156215 #36 Theria ANCESTRAL SPECIES 7 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00450000040324.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000177637 ENSGT00940000156215 #36 Eutheria ANCESTRAL SPECIES 15 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000177637 ENSGT00940000156215 #36 Boreoeutheria ANCESTRAL SPECIES 19 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.e.b ##36 ENSGT00940000177637 Euarchontoglires ANCESTRAL SPECIES 19 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.e.b ##36 ENSGT00940000177637 Euarchontoglires_A ANCESTRAL SPECIES 19 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.e.b ##36 Glires ANCESTRAL SPECIES 20 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000177637 Rodentia ANCESTRAL SPECIES 19 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Rodentia_B ANCESTRAL SPECIES 17 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Myomorpha ANCESTRAL SPECIES 18 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT01040000244443 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Muroidea ANCESTRAL SPECIES 14 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT01040000244443 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Muroidea_A ANCESTRAL SPECIES 9 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT01040000244443 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Murinae ANCESTRAL SPECIES 10 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Mus ANCESTRAL SPECIES 11 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Mus_A ANCESTRAL SPECIES 13 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239.o.b ##23 ENSGT00960000192853 ENSGT00940000155239.o.a #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Mus_B ANCESTRAL SPECIES 12 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239.o.b ##23 ENSGT00960000192853 ENSGT00940000155239.o.a #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Mouse MODERN SPECIES 6 Slurp2 (ENSMUSG00000075605) #7 Lypd2 (ENSMUSG00000022595) #8 Slurp1 (ENSMUSG00000022596) #9 Them6 (ENSMUSG00000056665) #10 Psca (ENSMUSG00000022598) #11 Jrk (ENSMUSG00000046380) #12 Arc (ENSMUSG00000022602) #13 Mroh4 (ENSMUSG00000022603) #14 Adgrb1 (ENSMUSG00000034730) #15 Gm6569 (ENSMUSG00000086361) #16 Mroh5 (ENSMUSG00000072487) #17 Ptp4a3 (ENSMUSG00000059895) #18 Gpr20 (ENSMUSG00000045281) #19 Slc45a4 (ENSMUSG00000079020) #20 Dennd3 (ENSMUSG00000036661) #21 Ptk2 (ENSMUSG00000022607) #22 Ago2 (ENSMUSG00000036698) #23 Chrac1 (ENSMUSG00000068391) #24 Trappc9 (ENSMUSG00000047921) #25 Kcnk9 (ENSMUSG00000036760) #26 Col22a1 (ENSMUSG00000079022) #27 Fam135b (ENSMUSG00000036800) #28 Khdrbs3 (ENSMUSG00000022332) #29 Zfat (ENSMUSG00000022335) #30 St3gal1 (ENSMUSG00000013846) #31 Ndrg1 (ENSMUSG00000005125) #32 Ccn4 (ENSMUSG00000005124) #33 Sla (ENSMUSG00000022372) #34 Tg (ENSMUSG00000053469) #35 Phf20l1 (ENSMUSG00000072501) #36 Tmem71 (ENSMUSG00000036944) #37 Mus_C ANCESTRAL SPECIES 28 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239.o.b ##23 ENSGT00960000192853 ENSGT00940000155239.p ##23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 spretus MODERN SPECIES 6 Slurp2 (MGP_SPRETEiJ_G0020775) #7 Lypd2 (MGP_SPRETEiJ_G0020774) #8 Slurp1 (MGP_SPRETEiJ_G0020773) #9 Them6 (MGP_SPRETEiJ_G0020772) #10 Psca (MGP_SPRETEiJ_G0020771) #11 Jrk (MGP_SPRETEiJ_G0020770) #12 Arc (MGP_SPRETEiJ_G0020769) #13 Mroh4 (MGP_SPRETEiJ_G0020768) #14 MGP_SPRETEiJ_G0020767 #15 Gm6569 (MGP_SPRETEiJ_G0020766) #16 MGP_SPRETEiJ_G0020765 #17 Ptp4a3 (MGP_SPRETEiJ_G0020764) #18 Gpr20 (MGP_SPRETEiJ_G0020763) #19 Slc45a4 (MGP_SPRETEiJ_G0020762) #20 Dennd3 (MGP_SPRETEiJ_G0020761) #21 Ptk2 (MGP_SPRETEiJ_G0020760) #22 Ago2 (MGP_SPRETEiJ_G0020759) ##23 Chrac1 (MGP_SPRETEiJ_G0020758) #24 Trappc9 (MGP_SPRETEiJ_G0020757) #25 Kcnk9 (MGP_SPRETEiJ_G0020756) #26 Col22a1 (MGP_SPRETEiJ_G0020755) #27 Fam135b (MGP_SPRETEiJ_G0020754) #28 Khdrbs3 (MGP_SPRETEiJ_G0020753) #29 Zfat (MGP_SPRETEiJ_G0020752) #30 St3gal1 (MGP_SPRETEiJ_G0020751) #31 Ndrg1 (MGP_SPRETEiJ_G0020750) #32 Ccn4 (MGP_SPRETEiJ_G0020749) #33 MGP_SPRETEiJ_G0020748 #34 Tg (MGP_SPRETEiJ_G0020747) #35 Phf20l1 (MGP_SPRETEiJ_G0020746) #36 Tmem71 (MGP_SPRETEiJ_G0020745) #37 Steppe mouse MODERN SPECIES 2986 Gm6569 (ENSMSIG00000018810) #16 Mroh5 (ENSMSIG00000018827) #17 Ptp4a3 (ENSMSIG00000018977) #18 Gpr20 (ENSMSIG00000019071) #19 Slc45a4 (ENSMSIG00000019078) #20 Dennd3 (ENSMSIG00000019118) #21 Ptk2 (ENSMSIG00000019258) #22 ENSMSIG00000019719 ##23 ENSMSIG00000019739 Chrac1 (ENSMSIG00000019743) #24 Trappc9 (ENSMSIG00000019764) #25 ENSMSIG00000020555 #26 Ryukyu mouse MODERN SPECIES 6 Slurp2 (MGP_CAROLIEiJ_G0019877) #7 Lypd2 (MGP_CAROLIEiJ_G0019876) #8 Slurp1 (MGP_CAROLIEiJ_G0019875) #9 Them6 (MGP_CAROLIEiJ_G0019874) #10 Psca (MGP_CAROLIEiJ_G0019873) #11 Jrk (MGP_CAROLIEiJ_G0019872) #12 Arc (MGP_CAROLIEiJ_G0019871) #13 Mroh4 (MGP_CAROLIEiJ_G0019870) #14 Adgrb1 (MGP_CAROLIEiJ_G0019869) #15 Gm6569 (MGP_CAROLIEiJ_G0019868) #16 MGP_CAROLIEiJ_G0019867 #17 Ptp4a3 (MGP_CAROLIEiJ_G0019866) #18 Gpr20 (MGP_CAROLIEiJ_G0019865) #19 Slc45a4 (MGP_CAROLIEiJ_G0019864) #20 Dennd3 (MGP_CAROLIEiJ_G0019863) #21 Ptk2 (MGP_CAROLIEiJ_G0019862) #22 Ago2 (MGP_CAROLIEiJ_G0019861) #23 Chrac1 (MGP_CAROLIEiJ_G0019860) #24 Trappc9 (MGP_CAROLIEiJ_G0019859) #25 Kcnk9 (MGP_CAROLIEiJ_G0019858) #26 Col22a1 (MGP_CAROLIEiJ_G0019857) #27 Fam135b (MGP_CAROLIEiJ_G0019856) #28 Khdrbs3 (MGP_CAROLIEiJ_G0019855) #29 Zfat (MGP_CAROLIEiJ_G0019854) #30 St3gal1 (MGP_CAROLIEiJ_G0019853) #31 Ndrg1 (MGP_CAROLIEiJ_G0019852) #32 Ccn4 (MGP_CAROLIEiJ_G0019851) #33 MGP_CAROLIEiJ_G0019850 #34 Tg (MGP_CAROLIEiJ_G0019849) #35 Phf20l1 (MGP_CAROLIEiJ_G0019848) #36 Tmem71 (MGP_CAROLIEiJ_G0019847) #37 Shrew mouse MODERN SPECIES 8 Slurp2 (MGP_PahariEiJ_G0019883) #7 Lypd2 (MGP_PahariEiJ_G0019882) #8 Slurp1 (MGP_PahariEiJ_G0019881) #9 Them6 (MGP_PahariEiJ_G0019880) #10 Psca (MGP_PahariEiJ_G0019879) #11 Jrk (MGP_PahariEiJ_G0019878) #12 Arc (MGP_PahariEiJ_G0019877) #13 Mroh4 (MGP_PahariEiJ_G0019876) #14 Adgrb1 (MGP_PahariEiJ_G0019875) #15 Gm6569 (MGP_PahariEiJ_G0019874) #16 MGP_PahariEiJ_G0019873 #17 Ptp4a3 (MGP_PahariEiJ_G0019872) #18 Gpr20 (MGP_PahariEiJ_G0019871) #19 Slc45a4 (MGP_PahariEiJ_G0019870) #20 Dennd3 (MGP_PahariEiJ_G0019869) #21 Ptk2 (MGP_PahariEiJ_G0019868) #22 Ago2 (MGP_PahariEiJ_G0019867) #23 Chrac1 (MGP_PahariEiJ_G0019866) #24 Trappc9 (MGP_PahariEiJ_G0019865) #25 Kcnk9 (MGP_PahariEiJ_G0019864) #26 Col22a1 (MGP_PahariEiJ_G0019863) #27 MGP_PahariEiJ_G0019862 Fam135b (MGP_PahariEiJ_G0019861) #28 Khdrbs3 (MGP_PahariEiJ_G0019860) #29 Zfat (MGP_PahariEiJ_G0019859) #30 St3gal1 (MGP_PahariEiJ_G0019858) #31 Ndrg1 (MGP_PahariEiJ_G0019857) #32 Ccn4 (MGP_PahariEiJ_G0019856) #33 Sla (MGP_PahariEiJ_G0019855) #34 Tg (MGP_PahariEiJ_G0019854) #35 Phf20l1 (MGP_PahariEiJ_G0019853) #36 Rat MODERN SPECIES 17 Lypd2 (ENSRNOG00000006058) #8 Slurp1 (ENSRNOG00000005944) #9 Them6 (ENSRNOG00000005929) #10 Psca (ENSRNOG00000061376) #11 Jrk (ENSRNOG00000027238) #12 Arc (ENSRNOG00000043465) #13 Mroh4 (ENSRNOG00000005382) #14 Adgrb1 (ENSRNOG00000029450) #15 AABR07058413.1 (ENSRNOG00000037401) Gm6569 (ENSRNOG00000065138) #16 Mroh5 (ENSRNOG00000032827) #17 Ptp4a3 (ENSRNOG00000007628) #18 Slc45a4 (ENSRNOG00000007818) #20 Dennd3 (ENSRNOG00000010794) #21 RGD1564268 (ENSRNOG00000059955) Ptk2 (ENSRNOG00000007916) #22 Ago2 (ENSRNOG00000008533) #23 Chrac1 (ENSRNOG00000009103) #24 Trappc9 (ENSRNOG00000027569) #25 Kcnk9 (ENSRNOG00000009265) #26 Col22a1 (ENSRNOG00000024824) #27 Fam135b (ENSRNOG00000005159) #28 Rps19l1 (ENSRNOG00000031474) Khdrbs3 (ENSRNOG00000009539) #29 ENSRNOG00000070681 Zfat (ENSRNOG00000025140) #30 ENSRNOG00000067606 AABR07058284.1 (ENSRNOG00000062233) St3gal1 (ENSRNOG00000008209) #31 Ndrg1 (ENSRNOG00000007393) #32 Ccn4 (ENSRNOG00000007078) #33 Cricetidae ANCESTRAL SPECIES 10 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT01040000244443 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Cricetinae ANCESTRAL SPECIES 3 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT01040000244443 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 808 Slurp1 (ENSMAUG00000017663) #9 Them6 (ENSMAUG00000000073) #10 Psca (ENSMAUG00000019289) #11 Jrk (ENSMAUG00000009637) #12 Arc (ENSMAUG00000007812) #13 Mroh4 (ENSMAUG00000016636) #14 Adgrb1 (ENSMAUG00000017581) #15 Gm6569 (ENSMAUG00000013636) #16 ENSMAUG00000012349 #17 Ptp4a3 (ENSMAUG00000014965) #18 Gpr20 (ENSMAUG00000016031) #19 ENSMAUG00000012339 Slc45a4 (ENSMAUG00000012951) #20 Dennd3 (ENSMAUG00000012902) #21 ENSMAUG00000012475 #22 ENSMAUG00000004255 #22 Ago2 (ENSMAUG00000007785) #23 Chrac1 (ENSMAUG00000003929) #24 Trappc9 (ENSMAUG00000005781) #25 ENSMAUG00000006643 Kcnk9 (ENSMAUG00000004861) #26 Golden Hamster MODERN SPECIES 808 Lypd2 (ENSMAUG00000018339) #8 Slurp1 (ENSMAUG00000017663) #9 Them6 (ENSMAUG00000000073) #10 Psca (ENSMAUG00000019289) #11 Jrk (ENSMAUG00000009637) #12 Arc (ENSMAUG00000007812) #13 Mroh4 (ENSMAUG00000016636) #14 Adgrb1 (ENSMAUG00000017581) #15 Gm6569 (ENSMAUG00000013636) #16 ENSMAUG00000012349 #17 Ptp4a3 (ENSMAUG00000014965) #18 Gpr20 (ENSMAUG00000016031) #19 ENSMAUG00000012339 Slc45a4 (ENSMAUG00000012951) #20 Dennd3 (ENSMAUG00000012902) #21 ENSMAUG00000012475 #22 ENSMAUG00000004255 #22 Ago2 (ENSMAUG00000007785) #23 Chrac1 (ENSMAUG00000003929) #24 Trappc9 (ENSMAUG00000005781) #25 ENSMAUG00000006643 Kcnk9 (ENSMAUG00000004861) #26 Chinese hamster chok1gshd MODERN SPECIES 1 Slurp2 (ENSCGRG00001013691) #7 Lypd2 (ENSCGRG00001013365) #8 Slurp1 (ENSCGRG00001015798) #9 Them6 (ENSCGRG00001015372) #10 Psca (ENSCGRG00001013251) #11 Jrk (ENSCGRG00001008321) #12 Arc (ENSCGRG00001010007) #13 Mroh4 (ENSCGRG00001018940) #14 Adgrb1 (ENSCGRG00001012492) #15 Gm6569 (ENSCGRG00001011043) #16 ENSCGRG00001007998 #17 Ptp4a3 (ENSCGRG00001018579) #18 Gpr20 (ENSCGRG00001009487) #19 Slc45a4 (ENSCGRG00001015280) #20 Dennd3 (ENSCGRG00001009394) #21 Ptk2 (ENSCGRG00001017616) #22 Ago2 (ENSCGRG00001013557) #23 Chrac1 (ENSCGRG00001017929) #24 Trappc9 (ENSCGRG00001017331) #25 Kcnk9 (ENSCGRG00001006436) #26 ENSCGRG00001009509 ENSCGRG00001008804 Or2j3 (ENSCGRG00001009983) ENSCGRG00001010145 ENSCGRG00001008825 ENSCGRG00001009632 Or2h15 (ENSCGRG00001007379) ENSCGRG00001008054 ENSCGRG00001007593 ENSCGRG00001014302 ENSCGRG00001009752 Cricetidae_B ANCESTRAL SPECIES 6 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Prairie vole MODERN SPECIES 2 Slurp2 (ENSMOCG00000005277) #7 Lypd2 (ENSMOCG00000018807) #8 Slurp1 (ENSMOCG00000019456) #9 Them6 (ENSMOCG00000022648) #10 Psca (ENSMOCG00000022772) #11 Jrk (ENSMOCG00000011136) #12 Arc (ENSMOCG00000014212) #13 Mroh4 (ENSMOCG00000000343) #14 Adgrb1 (ENSMOCG00000016067) #15 Gm6569 (ENSMOCG00000012239) #16 ENSMOCG00000008614 #17 Ptp4a3 (ENSMOCG00000018999) #18 Gpr20 (ENSMOCG00000003252) #19 Slc45a4 (ENSMOCG00000000762) #20 Dennd3 (ENSMOCG00000010331) #21 Ptk2 (ENSMOCG00000020779) #22 Ago2 (ENSMOCG00000000300) #23 ENSMOCG00000019826 Trappc9 (ENSMOCG00000009140) #25 Kcnk9 (ENSMOCG00000006383) #26 Col22a1 (ENSMOCG00000018105) #27 ENSMOCG00000002707 #28 ENSMOCG00000003737 #28 Khdrbs3 (ENSMOCG00000020954) #29 Zfat (ENSMOCG00000018121) #30 St3gal1 (ENSMOCG00000000379) #31 Ndrg1 (ENSMOCG00000012344) #32 Ccn4 (ENSMOCG00000012019) #33 Tg (ENSMOCG00000022735) #35 Sla (ENSMOCG00000020997) #34 Phf20l1 (ENSMOCG00000021213) #36 Northern American deer mouse MODERN SPECIES 12 Lypd2 (ENSPEMG00000011523) #8 Slurp1 (ENSPEMG00000025990) #9 Them6 (ENSPEMG00000014387) #10 Psca (ENSPEMG00000018490) #11 Jrk (ENSPEMG00000029676) #12 Arc (ENSPEMG00000017068) #13 Mroh4 (ENSPEMG00000003300) #14 ENSPEMG00000013061 #15 ENSPEMG00000027795 Gm6569 (ENSPEMG00000019855) #16 ENSPEMG00000020041 #17 Ptp4a3 (ENSPEMG00000019413) #18 Gpr20 (ENSPEMG00000015627) #19 Slc45a4 (ENSPEMG00000011925) #20 Dennd3 (ENSPEMG00000020034) #21 Ptk2 (ENSPEMG00000019854) #22 Ago2 (ENSPEMG00000008137) #23 ENSPEMG00000024935 Chrac1 (ENSPEMG00000025421) #24 Trappc9 (ENSPEMG00000019785) #25 Kcnk9 (ENSPEMG00000030534) #26 Col22a1 (ENSPEMG00000030858) #27 Fam135b (ENSPEMG00000019395) #28 Khdrbs3 (ENSPEMG00000010099) #29 Zfat (ENSPEMG00000016138) #30 ENSPEMG00000009860 St3gal1 (ENSPEMG00000026966) #31 Ndrg1 (ENSPEMG00000000640) #32 Ccn4 (ENSPEMG00000018230) #33 Sla (ENSPEMG00000017713) #34 Tg (ENSPEMG00000010025) #35 Upper Galilee mountains blind mole rat MODERN SPECIES 1563 Ly6d (ENSNGAG00000019323) ENSNGAG00000002886 #7 Lypd2 (ENSNGAG00000012150) #8 Slurp1 (ENSNGAG00000015613) #9 Them6 (ENSNGAG00000017349) #10 Psca (ENSNGAG00000018283) #11 Jrk (ENSNGAG00000000303) #12 Arc (ENSNGAG00000000562) #13 Adgrb1 (ENSNGAG00000002210) #15 Gm6569 (ENSNGAG00000010718) #16 Ptp4a3 (ENSNGAG00000012875) #18 Gpr20 (ENSNGAG00000013605) #19 ENSNGAG00000015542 Slc45a4 (ENSNGAG00000016323) #20 Dennd3 (ENSNGAG00000002578) #21 Ptk2 (ENSNGAG00000012523) #22 Ago2 (ENSNGAG00000014556) #23 Chrac1 (ENSNGAG00000000333) #24 Trappc9 (ENSNGAG00000009281) #25 Kcnk9 (ENSNGAG00000015255) #26 ENSNGAG00000013443 Lesser Egyptian jerboa MODERN SPECIES 223 ENSJJAG00000019212 #15 ENSJJAG00000019004 #15 Gm6569 (ENSJJAG00000018857) #16 ENSJJAG00000013660 #17 Ptp4a3 (ENSJJAG00000013243) #18 Gpr20 (ENSJJAG00000011714) #19 ENSJJAG00000013106 Slc45a4 (ENSJJAG00000013200) #20 Dennd3 (ENSJJAG00000011270) #21 ENSJJAG00000010072 Ptk2 (ENSJJAG00000004391) #22 Ago2 (ENSJJAG00000018712) #23 Chrac1 (ENSJJAG00000017631) #24 Trappc9 (ENSJJAG00000016725) #25 Kangaroo rat MODERN SPECIES 401 Ly6d (ENSDORG00000024972) Slurp2 (ENSDORG00000015171) #7 Lypd2 (ENSDORG00000009417) #8 Slurp1 (ENSDORG00000009416) #9 ENSDORG00000028228 #10 Psca (ENSDORG00000023668) #11 Jrk (ENSDORG00000025733) #12 Arc (ENSDORG00000028670) #13 Mroh4 (ENSDORG00000023974) #14 ENSDORG00000005970 #15 ENSDORG00000024177 ENSDORG00000030230 #17 Ptp4a3 (ENSDORG00000015794) #18 ENSDORG00000028864 #20 Dennd3 (ENSDORG00000005645) #21 Ptk2 (ENSDORG00000014660) #22 Ago2 (ENSDORG00000011242) #23 Chrac1 (ENSDORG00000028444) #24 Trappc9 (ENSDORG00000001882) #25 Kcnk9 (ENSDORG00000001880) #26 Col22a1 (ENSDORG00000003304) #27 ENSDORG00000028817 #28 ENSDORG00000006503 #28 Khdrbs3 (ENSDORG00000014595) #29 Zfat (ENSDORG00000007664) #30 St3gal1 (ENSDORG00000005921) #31 ENSDORG00000016104 #32 Ccn4 (ENSDORG00000025677) #33 ENSDORG00000023864 #35 Sla (ENSDORG00000007617) #34 ENSDORG00000029798 #36 Rodentia_A ANCESTRAL SPECIES 18 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280.j #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Hystricomorpha ANCESTRAL SPECIES 12 ENSGT00940000164325 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280.j #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Hystricomorpha_a ANCESTRAL SPECIES 9 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280.j #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00940000158506 Hystricomorpha_b ANCESTRAL SPECIES 27 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280.j #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00940000158506 Degu DUPLICATION Degu MODERN SPECIES 145 LYPD2 (ENSODEG00000014915) #8 SLURP1 (ENSODEG00000015407) #9 THEM6 (ENSODEG00000014821) #10 PSCA (ENSODEG00000016160) #11 JRK (ENSODEG00000020132) #12 ARC (ENSODEG00000020293) #13 ENSODEG00000014726 #14 ENSODEG00000015115 ADGRB1 (ENSODEG00000014587) #15 C8orf90 (ENSODEG00000015406) #16 ENSODEG00000014827 #17 PTP4A3 (ENSODEG00000014363) #18 GPR20 (ENSODEG00000020297) #19 SLC45A4 (ENSODEG00000014926) #20 DENND3 (ENSODEG00000013810) #21 ENSODEG00000015216 #22 AGO2 (ENSODEG00000014145) #23 ENSODEG00000014549 #24 ENSODEG00000014521 TRAPPC9 (ENSODEG00000014700) #25 KCNK9 (ENSODEG00000015679) #26 ENSODEG00000020212 ENSODEG00000014662 COL22A1 (ENSODEG00000015226) ENSODEG00000015548 #28 ENSODEG00000014642 ENSODEG00000014879 #28 Degu MODERN SPECIES 442 ENSODEG00000000458 #22 ENSODEG00000000433 Long-tailed chinchilla MODERN SPECIES 168 PTK2 (ENSCLAG00000001793) #22 AGO2 (ENSCLAG00000001381) #23 CHRAC1 (ENSCLAG00000001356) #24 TRAPPC9 (ENSCLAG00000004275) #25 KCNK9 (ENSCLAG00000003901) #26 COL22A1 (ENSCLAG00000002922) FAM135B (ENSCLAG00000002324) #28 KHDRBS3 (ENSCLAG00000002164) #29 ZFAT (ENSCLAG00000001985) #30 ST3GAL1 (ENSCLAG00000002721) #31 NDRG1 (ENSCLAG00000002544) #32 CCN4 (ENSCLAG00000002478) #33 SLA (ENSCLAG00000002422) #34 TG (ENSCLAG00000001570) #35 PHF20L1 (ENSCLAG00000001398) #36 ENSCLAG00000001275 Guinea pig MODERN SPECIES 17 LYNX1 (ENSCPOG00000039168) #7 SLURP2 (ENSCPOG00000040257) SLURP1 (ENSCPOG00000032557) #9 THEM6 (ENSCPOG00000021643) #10 PSCA (ENSCPOG00000037123) #11 JRK (ENSCPOG00000024068) #12 ARC (ENSCPOG00000021539) #13 ENSCPOG00000024726 #14 ADGRB1 (ENSCPOG00000008233) #15 C8orf90 (ENSCPOG00000034694) #16 ENSCPOG00000031866 #17 PTP4A3 (ENSCPOG00000039057) #18 GPR20 (ENSCPOG00000036801) #19 ENSCPOG00000019277 #20 DENND3 (ENSCPOG00000006551) #21 PTK2 (ENSCPOG00000000923) #22 AGO2 (ENSCPOG00000010428) #23 CHRAC1 (ENSCPOG00000035581) #24 TRAPPC9 (ENSCPOG00000003396) #25 KCNK9 (ENSCPOG00000005816) #26 COL22A1 (ENSCPOG00000000650) ENSCPOG00000032908 #28 ENSCPOG00000012989 #28 Naked mole-rat female MODERN SPECIES 1 ENSHGLG00000016723 LYPD2 (ENSHGLG00000018769) #8 SLURP1 (ENSHGLG00000039971) #9 THEM6 (ENSHGLG00000013642) #10 PSCA (ENSHGLG00000017427) #11 JRK (ENSHGLG00000042302) #12 ARC (ENSHGLG00000015257) #13 ENSHGLG00000037200 #14 ADGRB1 (ENSHGLG00000005458) #15 C8orf90 (ENSHGLG00000018605) #16 PTP4A3 (ENSHGLG00000014998) #18 GPR20 (ENSHGLG00000020410) #19 SLC45A4 (ENSHGLG00000011156) #20 DENND3 (ENSHGLG00000013884) #21 ENSHGLG00000006809 PTK2 (ENSHGLG00000011805) #22 ENSHGLG00000005548 #23 ENSHGLG00000045046 ENSHGLG00000043891 ENSHGLG00000005293 TRAPPC9 (ENSHGLG00000008781) #25 KCNK9 (ENSHGLG00000041028) #26 ENSHGLG00000015782 ENSHGLG00000014953 #28 ENSHGLG00000021272 ENSHGLG00000045916 ENSHGLG00000006718 #29 ZFAT (ENSHGLG00000012551) #30 ENSHGLG00000021259 ST3GAL1 (ENSHGLG00000041464) #31 NDRG1 (ENSHGLG00000014089) #32 Sciuridae ANCESTRAL SPECIES 17 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280.j #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Marmotini ANCESTRAL SPECIES 10 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280.j #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159300 #35 ENSGT00940000159104 #34 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Marmotini_b ANCESTRAL SPECIES 6 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280.j #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159300 #35 ENSGT00940000159104 #34 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Arctic ground squirrel MODERN SPECIES 282 LYPD2 (ENSUPAG00010006856) #8 SLURP1 (ENSUPAG00010006841) #9 THEM6 (ENSUPAG00010006827) #10 PSCA (ENSUPAG00010006819) #11 JRK (ENSUPAG00010006807) #12 ARC (ENSUPAG00010006802) #13 ENSUPAG00010006615 #14 ADGRB1 (ENSUPAG00010006555) #15 ENSUPAG00010006551 C8orf90 (ENSUPAG00010006543) #16 ENSUPAG00010006496 #17 PTP4A3 (ENSUPAG00010006486) #18 GPR20 (ENSUPAG00010006477) #19 SLC45A4 (ENSUPAG00010006464) #20 DENND3 (ENSUPAG00010006428) #21 PTK2 (ENSUPAG00010006311) #22 ENSUPAG00010006307 AGO2 (ENSUPAG00010006287) #23 CHRAC1 (ENSUPAG00010006278) #24 TRAPPC9 (ENSUPAG00010006121) #25 Squirrel MODERN SPECIES 70 ZFP41 (ENSSTOG00000022550) LY6H (ENSSTOG00000001914) ENSSTOG00000001472 LY6D (ENSSTOG00000016531) ENSSTOG00000022520 #7 THEM6 (ENSSTOG00000022145) #10 PSCA (ENSSTOG00000008313) #11 JRK (ENSSTOG00000021183) #12 ARC (ENSSTOG00000005258) #13 ADGRB1 (ENSSTOG00000027177) #15 ENSSTOG00000024244 #17 PTP4A3 (ENSSTOG00000019728) #18 GPR20 (ENSSTOG00000005890) #19 SLC45A4 (ENSSTOG00000020502) #20 DENND3 (ENSSTOG00000011809) #21 PTK2 (ENSSTOG00000013107) #22 AGO2 (ENSSTOG00000008113) #23 CHRAC1 (ENSSTOG00000008105) #24 TRAPPC9 (ENSSTOG00000000039) #25 KCNK9 (ENSSTOG00000027592) #26 ENSSTOG00000019372 #27 FAM135B (ENSSTOG00000013996) #28 KHDRBS3 (ENSSTOG00000008710) #29 ZFAT (ENSSTOG00000006903) #30 ST3GAL1 (ENSSTOG00000024282) #31 NDRG1 (ENSSTOG00000027200) #32 CCN4 (ENSSTOG00000024729) #33 ENSSTOG00000012423 #35 SLA (ENSSTOG00000012453) #34 PHF20L1 (ENSSTOG00000012416) #36 TMEM71 (ENSSTOG00000022474) #37 Alpin marmot MODERN SPECIES 18 ENSMMMG00000005836 #7 LYPD2 (ENSMMMG00000005834) #8 SLURP1 (ENSMMMG00000005823) #9 THEM6 (ENSMMMG00000005816) #10 PSCA (ENSMMMG00000005803) #11 JRK (ENSMMMG00000005796) #12 ARC (ENSMMMG00000005789) #13 ENSMMMG00000005762 #14 ENSMMMG00000005725 #15 TSNARE1 (ENSMMMG00000005713) ENSMMMG00000005683 #17 PTP4A3 (ENSMMMG00000005644) #18 GPR20 (ENSMMMG00000005632) #19 SLC45A4 (ENSMMMG00000005608) #20 DENND3 (ENSMMMG00000005523) #21 PTK2 (ENSMMMG00000005381) #22 AGO2 (ENSMMMG00000005337) #23 CHRAC1 (ENSMMMG00000005325) #24 TRAPPC9 (ENSMMMG00000005137) #25 KCNK9 (ENSMMMG00000005117) #26 ENSMMMG00000004920 #27 FAM135B (ENSMMMG00000004861) #28 ENSMMMG00000004798 KHDRBS3 (ENSMMMG00000004785) #29 ZFAT (ENSMMMG00000004348) #30 ST3GAL1 (ENSMMMG00000004307) #31 NDRG1 (ENSMMMG00000004288) #32 CCN4 (ENSMMMG00000004263) #33 SLA (ENSMMMG00000004139) #34 TG (ENSMMMG00000004004) #35 PHF20L1 (ENSMMMG00000003892) #36 Eurasian red squirrel DUPLICATION Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005004569 #22 ENSSVLG00005004553 #22 ENSSVLG00005004513 ENSSVLG00005004498 ENSSVLG00005004488 ENSSVLG00005004462 ENSSVLG00005004447 ENSSVLG00005004423 ENSSVLG00005004354 ENSSVLG00005004345 ENSSVLG00005004326 ENSSVLG00005004312 ENSSVLG00005017769 ENSSVLG00005017749 H1-5 (ENSSVLG00005017730) ENSSVLG00005017713 Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005004569 #22 ENSSVLG00005004553 #22 ENSSVLG00005004513 ENSSVLG00005004498 ENSSVLG00005004488 ENSSVLG00005004462 ENSSVLG00005004447 ENSSVLG00005004423 ENSSVLG00005004354 ENSSVLG00005004345 ENSSVLG00005004326 ENSSVLG00005004312 ENSSVLG00005017769 ENSSVLG00005017749 H1-5 (ENSSVLG00005017730) ENSSVLG00005017713 ENSSVLG00005017687 Eurasian red squirrel MODERN SPECIES LYNX1 (ENSSVLG00005023135) #7 LYPD2 (ENSSVLG00005023079) #8 SLURP1 (ENSSVLG00005023055) #9 THEM6 (ENSSVLG00005023036) #10 PSCA (ENSSVLG00005023011) #11 JRK (ENSSVLG00005022992) #12 ARC (ENSSVLG00005022979) #13 ENSSVLG00005022713 #14 ADGRB1 (ENSSVLG00005022303) #15 ENSSVLG00005022182 MROH5 (ENSSVLG00005021860) #17 PTP4A3 (ENSSVLG00005021774) #18 GPR20 (ENSSVLG00005021746) #19 SLC45A4 (ENSSVLG00005021723) #20 ENSSVLG00005021625 ENSSVLG00005020362 #22 AGO2 (ENSSVLG00005019843) #23 CHRAC1 (ENSSVLG00005019735) #24 TRAPPC9 (ENSSVLG00005019480) #25 ENSSVLG00005019252 KCNK9 (ENSSVLG00005019190) #26 ENSSVLG00005018670 #27 FAM135B (ENSSVLG00005018467) #28 ENSSVLG00005018282 #29 ZFAT (ENSSVLG00005017882) #30 ST3GAL1 (ENSSVLG00005017801) #31 NDRG1 (ENSSVLG00005017455) #32 CCN4 (ENSSVLG00005017264) #33 SLA (ENSSVLG00005016977) #34 TG (ENSSVLG00005016366) #35 PHF20L1 (ENSSVLG00005016179) #36 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 55 ENSSVLG00005020462 #22 Eurasian red squirrel MODERN SPECIES 103 ENSSVLG00005015609 #22 Lagomorpha ANCESTRAL SPECIES ENSGT00940000155113.a.a #22 Pika MODERN SPECIES 2478 PTK2 (ENSOPRG00000013154) #22 Rabbit DUPLICATION Rabbit MODERN SPECIES 14 IMPA1 (ENSOCUG00000014535) ENSOCUG00000035758 SNX16 (ENSOCUG00000023666) FABP12 (ENSOCUG00000013189) ENSOCUG00000007445 FABP5 (ENSOCUG00000010425) PAG1 (ENSOCUG00000014767) ENSOCUG00000023452 ZNF704 (ENSOCUG00000016504) ZBTB10 (ENSOCUG00000001857) ENSOCUG00000008247 MRPS28 (ENSOCUG00000000867) HEY1 (ENSOCUG00000016568) STMN2 (ENSOCUG00000008312) ENSOCUG00000000308 ENSOCUG00000035772 #22 IL7 (ENSOCUG00000029611) ZC2HC1A (ENSOCUG00000001124) PKIA (ENSOCUG00000021115) ENSOCUG00000024404 PEX2 (ENSOCUG00000017625) ENSOCUG00000036154 ZFHX4 (ENSOCUG00000001723) ENSOCUG00000025047 HNF4G (ENSOCUG00000012041) ENSOCUG00000021684 CRISPLD1 (ENSOCUG00000009616) PI15 (ENSOCUG00000022299) GDAP1 (ENSOCUG00000007700) JPH1 (ENSOCUG00000007692) ENSOCUG00000030927 Rabbit MODERN SPECIES 682 PTK2 (ENSOCUG00000003282) #22 Tree shrew MODERN SPECIES 1033 PTK2 (ENSTBEG00000003660) #22 ENSTBEG00000003401 #23 Primates ANCESTRAL SPECIES 20 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Haplorrhini ANCESTRAL SPECIES 19 ENSGT00940000164325 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Tarsier MODERN SPECIES 1800 PTK2 (ENSTSYG00000008819) #22 Simiiformes ANCESTRAL SPECIES 20 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Platyrrhini ANCESTRAL SPECIES 17 ENSGT00940000164325 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C.j #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.a #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000167737 ENSGT00940000154158.k.b ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159300 #35 ENSGT00940000159104 #34 Cebidae ANCESTRAL SPECIES 19 ENSGT00940000164325 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C.j #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.a #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000167737 ENSGT00940000154158.k.b ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159300 #35 ENSGT00940000159104 #34 Cebidae_a ANCESTRAL SPECIES 150 ENSGT00940000155784.C.i #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.a #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 Capuchin MODERN SPECIES 284 SYTL5 (ENSCCAG00000032709) SRPX (ENSCCAG00000025497) ENSCCAG00000021581 #21 PTK2 (ENSCCAG00000025146) #22 AGO2 (ENSCCAG00000035031) #23 ENSCCAG00000033163 #24 ENSCCAG00000022042 TRAPPC9 (ENSCCAG00000030541) #25 KCNK9 (ENSCCAG00000024965) #26 ENSCCAG00000021082 ENSCCAG00000032083 #27 Bolivian squirrel monkey MODERN SPECIES 195 LYNX1 (ENSSBOG00000024857) #7 SLURP2 (ENSSBOG00000035510) LYPD2 (ENSSBOG00000022892) #8 SLURP1 (ENSSBOG00000025334) #9 THEM6 (ENSSBOG00000027066) #10 LY6K (ENSSBOG00000021017) PSCA (ENSSBOG00000024255) #11 JRK (ENSSBOG00000024810) #12 ARC (ENSSBOG00000009916) #13 ADGRB1 (ENSSBOG00000012102) #15 TSNARE1 (ENSSBOG00000027290) MROH5 (ENSSBOG00000028055) #17 PTP4A3 (ENSSBOG00000034074) #18 SLC45A4 (ENSSBOG00000021245) #20 DENND3 (ENSSBOG00000016014) #21 PTK2 (ENSSBOG00000021376) #22 Marmoset MODERN SPECIES 7 LY6K (ENSCJAG00000021484) ENSCJAG00000062378 #11 JRK (ENSCJAG00000021476) #12 ARC (ENSCJAG00000012137) #13 ADGRB1 (ENSCJAG00000010346) #15 ENSCJAG00000010357 ENSCJAG00000083554 PTP4A3 (ENSCJAG00000071027) #18 GPR20 (ENSCJAG00000045235) #19 SLC45A4 (ENSCJAG00000003889) #20 ENSCJAG00000052747 ENSCJAG00000058694 ENSCJAG00000003842 #21 ENSCJAG00000078600 #21 ENSCJAG00000086765 PTK2 (ENSCJAG00000003921) #22 AGO2 (ENSCJAG00000004132) #23 ENSCJAG00000085338 #24 TRAPPC9 (ENSCJAG00000004191) #25 KCNK9 (ENSCJAG00000086842) #26 COL22A1 (ENSCJAG00000004235) FAM135B (ENSCJAG00000004293) #28 ENSCJAG00000052211 ENSCJAG00000058137 ENSCJAG00000042146 ENSCJAG00000039030 ENSCJAG00000077043 ENSCJAG00000075019 ENSCJAG00000069964 ENSCJAG00000004331 #29 ZFAT (ENSCJAG00000004348) #30 Mas night monkey MODERN SPECIES 602 GPIHBP1 (ENSANAG00000021409) ##11 GLI4 (ENSANAG00000016700) ZNF696 (ENSANAG00000019329) RHPN1 (ENSANAG00000022794) MAFA (ENSANAG00000021123) ZC3H3 (ENSANAG00000018742) GSDMD (ENSANAG00000019900) MROH6 (ENSANAG00000034518) NAPRT (ENSANAG00000031068) ENSANAG00000019322 PYCR3 (ENSANAG00000025985) ENSANAG00000028633 ZNF623 (ENSANAG00000028785) SLC45A4 (ENSANAG00000032643) #20 DENND3 (ENSANAG00000031248) #21 PTK2 (ENSANAG00000035429) #22 AGO2 (ENSANAG00000027399) #23 CHRAC1 (ENSANAG00000032245) #24 TRAPPC9 (ENSANAG00000023163) #25 KCNK9 (ENSANAG00000020788) #26 COL22A1 (ENSANAG00000028860) FAM135B (ENSANAG00000024544) #28 ENSANAG00000021967 Catarrhini ANCESTRAL SPECIES 15 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Hominoidea ANCESTRAL SPECIES 14 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00910000148395 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725.c #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Gibbon MODERN SPECIES 6 LYPD2 (ENSNLEG00000001310) #8 SLURP1 (ENSNLEG00000001300) #9 THEM6 (ENSNLEG00000001298) #10 ENSNLEG00000029363 PSCA (ENSNLEG00000001284) #11 JRK (ENSNLEG00000001280) #12 ADGRB1 (ENSNLEG00000001670) #15 ENSNLEG00000001660 ENSNLEG00000034800 MROH5 (ENSNLEG00000001633) #17 PTP4A3 (ENSNLEG00000001610) #18 SLC45A4 (ENSNLEG00000001582) #20 ENSNLEG00000001579 DENND3 (ENSNLEG00000001560) #21 ENSNLEG00000033490 PTK2 (ENSNLEG00000001510) #22 AGO2 (ENSNLEG00000001461) #23 ENSNLEG00000030588 #24 ENSNLEG00000029889 ENSNLEG00000018803 TRAPPC9 (ENSNLEG00000001396) #25 KCNK9 (ENSNLEG00000001377) #26 COL22A1 (ENSNLEG00000032227) FAM135B (ENSNLEG00000010778) #28 ENSNLEG00000034974 KHDRBS3 (ENSNLEG00000010766) #29 ZFAT (ENSNLEG00000010576) #30 ST3GAL1 (ENSNLEG00000005865) #31 ENSNLEG00000036242 NDRG1 (ENSNLEG00000005826) #32 CCN4 (ENSNLEG00000030189) #33 Hominidae ANCESTRAL SPECIES 15 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00910000148395 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000163244.d.b.a.b.b.a.a.a.b ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725.c #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Orangutan MODERN SPECIES 21 SLURP1 (ENSPPYG00000019027) #9 THEM6 (ENSPPYG00000018921) #10 ENSPPYG00000035700 PSCA (ENSPPYG00000018919) #11 JRK (ENSPPYG00000018918) #12 ARC (ENSPPYG00000018917) #13 ENSPPYG00000018915 ENSPPYG00000035984 C8orf90 (ENSPPYG00000032741) #16 MROH5 (ENSPPYG00000039561) #17 PTP4A3 (ENSPPYG00000033406) #18 GPR20 (ENSPPYG00000018912) #19 SLC45A4 (ENSPPYG00000018911) #20 DENND3 (ENSPPYG00000018910) #21 ENSPPYG00000031469 PTK2 (ENSPPYG00000018909) #22 AGO2 (ENSPPYG00000018908) #23 CHRAC1 (ENSPPYG00000018907) #24 ENSPPYG00000034298 ENSPPYG00000018905 TRAPPC9 (ENSPPYG00000018904) #25 KCNK9 (ENSPPYG00000018903) #26 COL22A1 (ENSPPYG00000018902) FAM135B (ENSPPYG00000018901) #28 KHDRBS3 (ENSPPYG00000018899) #29 ZFAT (ENSPPYG00000018898) #30 ST3GAL1 (ENSPPYG00000018896) #31 NDRG1 (ENSPPYG00000018895) #32 CCN4 (ENSPPYG00000018894) #33 SLA (ENSPPYG00000018893) #34 TG (ENSPPYG00000018892) #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 13 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00910000148395 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000163244.d.b.a.b.b.a.a.a.b ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725.c #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Homo/Pan group ANCESTRAL SPECIES 12 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000163244.d.b.a.b.b.a.a.a.b ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725.c #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Pan ANCESTRAL SPECIES 11 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000163244.d.b.a.b.b.a.a.a.b ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725.c #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Chimpanzee MODERN SPECIES 21 SLURP1 (ENSPTRG00000043368) #9 THEM6 (ENSPTRG00000020638) #10 LY6K (ENSPTRG00000020637) PSCA (ENSPTRG00000020636) #11 JRK (ENSPTRG00000048020) #12 ARC (ENSPTRG00000030920) #13 ADGRB1 (ENSPTRG00000020635) #15 TSNARE1 (ENSPTRG00000020633) C8orf90 (ENSPTRG00000051970) #16 MROH5 (ENSPTRG00000044474) #17 PTP4A3 (ENSPTRG00000020631) #18 GPR20 (ENSPTRG00000030922) #19 SLC45A4 (ENSPTRG00000020628) #20 DENND3 (ENSPTRG00000020626) #21 ENSPTRG00000047780 PTK2 (ENSPTRG00000020624) #22 AGO2 (ENSPTRG00000020622) #23 CHRAC1 (ENSPTRG00000049044) #24 ENSPTRG00000048472 TRAPPC9 (ENSPTRG00000020615) #25 KCNK9 (ENSPTRG00000048938) #26 COL22A1 (ENSPTRG00000020613) FAM135B (ENSPTRG00000020611) #28 ENSPTRG00000044953 ENSPTRG00000042207 KHDRBS3 (ENSPTRG00000020608) #29 ZFAT (ENSPTRG00000020607) #30 ST3GAL1 (ENSPTRG00000044747) #31 ENSPTRG00000046571 NDRG1 (ENSPTRG00000020603) #32 CCN4 (ENSPTRG00000020602) #33 Bonobo MODERN SPECIES 21 SLURP1 (ENSPPAG00000006874) #9 THEM6 (ENSPPAG00000043629) #10 LY6K (ENSPPAG00000037331) PSCA (ENSPPAG00000035765) #11 JRK (ENSPPAG00000037812) #12 ARC (ENSPPAG00000000502) #13 ADGRB1 (ENSPPAG00000032958) #15 TSNARE1 (ENSPPAG00000044059) ENSPPAG00000036750 MROH5 (ENSPPAG00000035893) #17 PTP4A3 (ENSPPAG00000038953) #18 GPR20 (ENSPPAG00000002891) #19 SLC45A4 (ENSPPAG00000029066) #20 DENND3 (ENSPPAG00000032948) #21 ENSPPAG00000031187 PTK2 (ENSPPAG00000042953) #22 AGO2 (ENSPPAG00000037787) #23 CHRAC1 (ENSPPAG00000034467) #24 ENSPPAG00000007802 TRAPPC9 (ENSPPAG00000030205) #25 KCNK9 (ENSPPAG00000042017) #26 COL22A1 (ENSPPAG00000038842) FAM135B (ENSPPAG00000041146) #28 ENSPPAG00000032028 KHDRBS3 (ENSPPAG00000043998) #29 ZFAT (ENSPPAG00000030339) #30 ST3GAL1 (ENSPPAG00000039735) #31 NDRG1 (ENSPPAG00000023493) #32 CCN4 (ENSPPAG00000042561) #33 SLA (ENSPPAG00000041911) #34 TG (ENSPPAG00000033957) #35 Human MODERN SPECIES 20 LYPD2 (ENSG00000197353) #8 SLURP1 (ENSG00000126233) #9 THEM6 (ENSG00000130193) #10 LY6K (ENSG00000160886) PSCA (ENSG00000167653) #11 JRK (ENSG00000234616) #12 ARC (ENSG00000198576) #13 ADGRB1 (ENSG00000181790) #15 TSNARE1 (ENSG00000171045) C8orf90 (ENSG00000226490) #16 MROH5 (ENSG00000226807) #17 PTP4A3 (ENSG00000184489) #18 GPR20 (ENSG00000204882) #19 SLC45A4 (ENSG00000022567) #20 DENND3 (ENSG00000105339) #21 PTK2 (ENSG00000169398) #22 AGO2 (ENSG00000123908) #23 CHRAC1 (ENSG00000104472) #24 TRAPPC9 (ENSG00000167632) #25 KCNK9 (ENSG00000169427) #26 COL22A1 (ENSG00000169436) FAM135B (ENSG00000147724) #28 KHDRBS3 (ENSG00000131773) #29 ZFAT (ENSG00000066827) #30 ST3GAL1 (ENSG00000008513) #31 NDRG1 (ENSG00000104419) #32 CCN4 (ENSG00000104415) #33 SLA (ENSG00000155926) #34 TG (ENSG00000042832) #35 PHF20L1 (ENSG00000129292) #36 TMEM71 (ENSG00000165071) #37 Gorilla MODERN SPECIES 21 THEM6 (ENSGGOG00000002369) #10 LY6K (ENSGGOG00000003816) PSCA (ENSGGOG00000003814) #11 JRK (ENSGGOG00000027151) #12 ARC (ENSGGOG00000004690) #13 ADGRB1 (ENSGGOG00000008974) #15 TSNARE1 (ENSGGOG00000036935) ENSGGOG00000042067 C8orf90 (ENSGGOG00000027364) #16 PTP4A3 (ENSGGOG00000037356) #18 GPR20 (ENSGGOG00000010614) #19 ENSGGOG00000024382 SLC45A4 (ENSGGOG00000008028) #20 DENND3 (ENSGGOG00000008013) #21 ENSGGOG00000041196 PTK2 (ENSGGOG00000011147) #22 AGO2 (ENSGGOG00000011412) #23 ENSGGOG00000040367 #24 ENSGGOG00000037266 ENSGGOG00000042061 TRAPPC9 (ENSGGOG00000002105) #25 ENSGGOG00000042932 KCNK9 (ENSGGOG00000037517) #26 COL22A1 (ENSGGOG00000010041) FAM135B (ENSGGOG00000007384) #28 ENSGGOG00000036996 ENSGGOG00000041443 KHDRBS3 (ENSGGOG00000000940) #29 ZFAT (ENSGGOG00000007362) #30 ST3GAL1 (ENSGGOG00000022531) #31 ENSGGOG00000043736 Cercopithecidae ANCESTRAL SPECIES 14 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Cercopithecinae ANCESTRAL SPECIES 16 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Vervet Monkey MODERN SPECIES 27 SLURP1 (ENSCSAG00000009223) #9 THEM6 (ENSCSAG00000009228) #10 LY6K (ENSCSAG00000009240) PSCA (ENSCSAG00000009257) #11 JRK (ENSCSAG00000018632) #12 ARC (ENSCSAG00000018631) #13 ADGRB1 (ENSCSAG00000009366) #15 TSNARE1 (ENSCSAG00000009477) C8orf90 (ENSCSAG00000009489) #16 MROH5 (ENSCSAG00000009511) #17 PTP4A3 (ENSCSAG00000009539) #18 GPR20 (ENSCSAG00000018621) #19 ENSCSAG00000009544 SLC45A4 (ENSCSAG00000009549) #20 DENND3 (ENSCSAG00000009555) #21 PTK2 (ENSCSAG00000009564) #22 AGO2 (ENSCSAG00000009574) #23 CHRAC1 (ENSCSAG00000009577) #24 TRAPPC9 (ENSCSAG00000009603) #25 KCNK9 (ENSCSAG00000009614) #26 ENSCSAG00000009743 #27 FAM135B (ENSCSAG00000009776) #28 KHDRBS3 (ENSCSAG00000009815) #29 ZFAT (ENSCSAG00000009828) #30 ST3GAL1 (ENSCSAG00000009838) #31 NDRG1 (ENSCSAG00000009841) #32 CCN4 (ENSCSAG00000009848) #33 SLA (ENSCSAG00000009852) #34 TG (ENSCSAG00000009878) #35 PHF20L1 (ENSCSAG00000009894) #36 TMEM71 (ENSCSAG00000009905) #37 Cercopithecinae_a ANCESTRAL SPECIES 15 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00910000147568 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Cercopithecinae_b ANCESTRAL SPECIES 9 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00910000147568 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159300 #35 ENSGT00940000159104 #34 Olive baboon MODERN SPECIES 18 LY6K (ENSPANG00000044276) PSCA (ENSPANG00000005745) #11 JRK (ENSPANG00000009437) #12 ARC (ENSPANG00000002588) #13 ADGRB1 (ENSPANG00000015392) #15 ENSPANG00000017580 C8orf90 (ENSPANG00000012866) #16 MROH5 (ENSPANG00000008664) #17 ENSPANG00000030593 #18 GPR20 (ENSPANG00000006579) #19 SLC45A4 (ENSPANG00000025488) #20 DENND3 (ENSPANG00000006229) #21 ENSPANG00000043996 ENSPANG00000041422 ENSPANG00000035712 PTK2 (ENSPANG00000015685) #22 AGO2 (ENSPANG00000005604) #23 CHRAC1 (ENSPANG00000018908) #24 TRAPPC9 (ENSPANG00000006964) #25 KCNK9 (ENSPANG00000016981) #26 COL22A1 (ENSPANG00000007983) FAM135B (ENSPANG00000019753) #28 ENSPANG00000037515 ENSPANG00000048695 ENSPANG00000042935 KHDRBS3 (ENSPANG00000006134) #29 ENSPANG00000048134 ZFAT (ENSPANG00000017457) #30 ST3GAL1 (ENSPANG00000021484) #31 NDRG1 (ENSPANG00000026080) #32 CCN4 (ENSPANG00000015800) #33 Cercopithecinae_d ANCESTRAL SPECIES 72 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00910000147810 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00910000147568 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00910000147964 Drill MODERN SPECIES 1032 C8orf90 (ENSMLEG00000033766) #16 MROH5 (ENSMLEG00000042913) #17 PTP4A3 (ENSMLEG00000041684) #18 GPR20 (ENSMLEG00000012223) #19 SLC45A4 (ENSMLEG00000040522) #20 ENSMLEG00000022991 DENND3 (ENSMLEG00000033267) #21 ENSMLEG00000043742 PTK2 (ENSMLEG00000030892) #22 AGO2 (ENSMLEG00000038874) #23 CHRAC1 (ENSMLEG00000040398) #24 TRAPPC9 (ENSMLEG00000027613) #25 ENSMLEG00000024566 Sooty mangabey MODERN SPECIES 586 THEM6 (ENSCATG00000042993) #10 LY6K (ENSCATG00000043689) PSCA (ENSCATG00000035662) #11 JRK (ENSCATG00000044794) #12 ARC (ENSCATG00000023773) #13 ADGRB1 (ENSCATG00000030208) #15 TSNARE1 (ENSCATG00000030146) C8orf90 (ENSCATG00000040128) #16 MROH5 (ENSCATG00000034124) #17 PTP4A3 (ENSCATG00000036356) #18 GPR20 (ENSCATG00000000416) #19 SLC45A4 (ENSCATG00000034875) #20 ENSCATG00000019758 DENND3 (ENSCATG00000043316) #21 ENSCATG00000042845 PTK2 (ENSCATG00000015054) #22 AGO2 (ENSCATG00000038820) #23 ENSCATG00000045042 CHRAC1 (ENSCATG00000036088) #24 TRAPPC9 (ENSCATG00000037076) #25 KCNK9 (ENSCATG00000044562) #26 ENSCATG00000016126 Macaca ANCESTRAL SPECIES 14 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00910000147568 ENSGT00510000048543 #24 ENSGT00910000148229 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00910000147964 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 Pig-tailed macaque MODERN SPECIES 146 THEM6 (ENSMNEG00000037253) #10 LY6K (ENSMNEG00000035301) PSCA (ENSMNEG00000031685) #11 JRK (ENSMNEG00000043958) #12 ARC (ENSMNEG00000031158) #13 ADGRB1 (ENSMNEG00000036808) #15 TSNARE1 (ENSMNEG00000042330) ENSMNEG00000030812 C8orf90 (ENSMNEG00000034800) #16 MROH5 (ENSMNEG00000029692) #17 PTP4A3 (ENSMNEG00000041873) #18 GPR20 (ENSMNEG00000004897) #19 SLC45A4 (ENSMNEG00000024497) #20 DENND3 (ENSMNEG00000041197) #21 ENSMNEG00000033517 PTK2 (ENSMNEG00000035528) #22 AGO2 (ENSMNEG00000019904) #23 ENSMNEG00000028578 CHRAC1 (ENSMNEG00000042914) #24 ENSMNEG00000042221 TRAPPC9 (ENSMNEG00000029776) #25 KCNK9 (ENSMNEG00000031135) #26 ENSMNEG00000021185 Macaca_a ANCESTRAL SPECIES 16 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000159966.B ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00940000161627.a.b.b.a.a.a ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00910000147964 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT01100000263543.a.g.b.b.b.b.c.a.a ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 Rhesus MODERN SPECIES 18 SLURP1 (ENSMMUG00000018303) #9 THEM6 (ENSMMUG00000042112) #10 LY6K (ENSMMUG00000019458) PSCA (ENSMMUG00000028899) #11 JRK (ENSMMUG00000022452) #12 ARC (ENSMMUG00000018519) #13 ADGRB1 (ENSMMUG00000019877) #15 TSNARE1 (ENSMMUG00000001432) ENSMMUG00000052421 C8orf90 (ENSMMUG00000055363) #16 MROH5 (ENSMMUG00000028901) #17 PTP4A3 (ENSMMUG00000019392) #18 GPR20 (ENSMMUG00000049586) #19 SLC45A4 (ENSMMUG00000013579) #20 DENND3 (ENSMMUG00000013578) #21 PTK2 (ENSMMUG00000002336) #22 AGO2 (ENSMMUG00000008045) #23 ENSMMUG00000056225 CHRAC1 (ENSMMUG00000057448) #24 ENSMMUG00000065332 TRAPPC9 (ENSMMUG00000048066) #25 ENSMMUG00000063726 KCNK9 (ENSMMUG00000045821) #26 ENSMMUG00000045425 COL22A1 (ENSMMUG00000047643) ENSMMUG00000054706 ENSMMUG00000050990 FAM135B (ENSMMUG00000020326) #28 KHDRBS3 (ENSMMUG00000022248) #29 ZFAT (ENSMMUG00000004918) #30 ENSMMUG00000058738 Crab-eating macaque MODERN SPECIES 18 ENSMFAG00000003844 ENSMFAG00000037171 ##11 ENSMFAG00000042555 #9 THEM6 (ENSMFAG00000057966) #10 LY6K (ENSMFAG00000061014) PSCA (ENSMFAG00000061175) #11 JRK (ENSMFAG00000004225) #12 ADGRB1 (ENSMFAG00000032171) #15 TSNARE1 (ENSMFAG00000044811) MROH5 (ENSMFAG00000031443) #17 ENSMFAG00000045266 #18 GPR20 (ENSMFAG00000051571) #19 SLC45A4 (ENSMFAG00000042422) #20 DENND3 (ENSMFAG00000034459) #21 ENSMFAG00000042048 PTK2 (ENSMFAG00000001164) #22 AGO2 (ENSMFAG00000015384) #23 ENSMFAG00000058355 CHRAC1 (ENSMFAG00000029360) #24 ENSMFAG00000062151 TRAPPC9 (ENSMFAG00000044625) #25 KCNK9 (ENSMFAG00000060542) #26 ENSMFAG00000049195 ENSMFAG00000030525 ENSMFAG00000059291 FAM135B (ENSMFAG00000045015) #28 ENSMFAG00000062756 KHDRBS3 (ENSMFAG00000041845) #29 ENSMFAG00000047187 ZFAT (ENSMFAG00000041283) #30 ENSMFAG00000056273 Rhinopithecus ANCESTRAL SPECIES 20 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000170377 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00910000146911 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00980000199292 ENSGT00390000006486 #25 ENSGT00940000159791 #26 Golden snub-nosed monkey MODERN SPECIES 2524 SLURP1 (ENSRROG00000041555) #9 THEM6 (ENSRROG00000009540) #10 ENSRROG00000036654 PSCA (ENSRROG00000003785) #11 JRK (ENSRROG00000032153) #12 ARC (ENSRROG00000024856) #13 ADGRB1 (ENSRROG00000029062) #15 TSNARE1 (ENSRROG00000040938) C8orf90 (ENSRROG00000038712) #16 MROH5 (ENSRROG00000033590) #17 PTP4A3 (ENSRROG00000036049) #18 GPR20 (ENSRROG00000008595) #19 SLC45A4 (ENSRROG00000037530) #20 DENND3 (ENSRROG00000030728) #21 ENSRROG00000043385 PTK2 (ENSRROG00000039869) #22 AGO2 (ENSRROG00000003162) #23 CHRAC1 (ENSRROG00000030598) #24 Black snub-nosed monkey MODERN SPECIES 1211 SLURP1 (ENSRBIG00000044635) #9 THEM6 (ENSRBIG00000017304) #10 ENSRBIG00000007353 PSCA (ENSRBIG00000035552) #11 JRK (ENSRBIG00000030182) #12 ARC (ENSRBIG00000005692) #13 ADGRB1 (ENSRBIG00000039356) #15 TSNARE1 (ENSRBIG00000034038) C8orf90 (ENSRBIG00000034213) #16 MROH5 (ENSRBIG00000042905) #17 PTP4A3 (ENSRBIG00000035342) #18 GPR20 (ENSRBIG00000012417) #19 SLC45A4 (ENSRBIG00000034659) #20 DENND3 (ENSRBIG00000041826) #21 ENSRBIG00000041483 PTK2 (ENSRBIG00000028864) #22 AGO2 (ENSRBIG00000028225) #23 CHRAC1 (ENSRBIG00000042659) #24 ENSRBIG00000041791 TRAPPC9 (ENSRBIG00000032901) #25 KCNK9 (ENSRBIG00000034302) #26 Strepsirrhini ANCESTRAL SPECIES 15 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Bushbaby MODERN SPECIES 177 ENSOGAG00000032664 #17 PTP4A3 (ENSOGAG00000013936) #18 ENSOGAG00000034723 GPR20 (ENSOGAG00000029183) #19 SLC45A4 (ENSOGAG00000008796) #20 DENND3 (ENSOGAG00000008776) #21 PTK2 (ENSOGAG00000008770) #22 AGO2 (ENSOGAG00000007933) #23 CHRAC1 (ENSOGAG00000007931) #24 ENSOGAG00000013931 #25 ENSOGAG00000026598 ENSOGAG00000032293 #25 KCNK9 (ENSOGAG00000013929) #26 COL22A1 (ENSOGAG00000012450) FAM135B (ENSOGAG00000005671) #28 ENSOGAG00000028327 KHDRBS3 (ENSOGAG00000005150) #29 ZFAT (ENSOGAG00000014784) #30 ST3GAL1 (ENSOGAG00000016218) #31 NDRG1 (ENSOGAG00000016213) #32 CCN4 (ENSOGAG00000016211) #33 TG (ENSOGAG00000009756) #35 Lemuriformes ANCESTRAL SPECIES 36 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Mouse lemur MODERN SPECIES 31 LY6D (ENSMICG00000035118) LYNX1 (ENSMICG00000046110) #7 SLURP2 (ENSMICG00000045139) LYPD2 (ENSMICG00000000486) #8 SLURP1 (ENSMICG00000046668) #9 THEM6 (ENSMICG00000027716) #10 PSCA (ENSMICG00000036374) #11 JRK (ENSMICG00000041639) #12 ADGRB1 (ENSMICG00000015976) #15 TSNARE1 (ENSMICG00000000568) C8orf90 (ENSMICG00000047940) #16 MROH5 (ENSMICG00000028942) #17 PTP4A3 (ENSMICG00000030190) #18 SLC45A4 (ENSMICG00000010421) #20 DENND3 (ENSMICG00000010407) #21 PTK2 (ENSMICG00000004440) #22 AGO2 (ENSMICG00000004427) #23 CHRAC1 (ENSMICG00000042491) #24 TRAPPC9 (ENSMICG00000004399) #25 ENSMICG00000045662 ENSMICG00000037374 KCNK9 (ENSMICG00000004397) #26 COL22A1 (ENSMICG00000005224) FAM135B (ENSMICG00000005212) #28 UBE3A (ENSMICG00000027572) ENSMICG00000037691 ATP10A (ENSMICG00000001113) GABRB3 (ENSMICG00000027069) GABRA5 (ENSMICG00000000032) GABRG3 (ENSMICG00000000033) ENSMICG00000027022 Lemuriformes_a ANCESTRAL SPECIES 40 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000168748 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Coquerels sifaka MODERN SPECIES 398 LY6D (ENSPCOG00000010018) LYNX1 (ENSPCOG00000023400) #7 SLURP2 (ENSPCOG00000015131) LYPD2 (ENSPCOG00000022486) #8 SLURP1 (ENSPCOG00000012662) #9 THEM6 (ENSPCOG00000020900) #10 PSCA (ENSPCOG00000015330) #11 JRK (ENSPCOG00000026070) #12 ADGRB1 (ENSPCOG00000021749) #15 TSNARE1 (ENSPCOG00000020528) C8orf90 (ENSPCOG00000022315) #16 MROH5 (ENSPCOG00000015704) #17 PTP4A3 (ENSPCOG00000018943) #18 SLC45A4 (ENSPCOG00000019648) #20 DENND3 (ENSPCOG00000018459) #21 PTK2 (ENSPCOG00000025086) #22 AGO2 (ENSPCOG00000023047) #23 CHRAC1 (ENSPCOG00000021396) #24 ENSPCOG00000020151 TRAPPC9 (ENSPCOG00000010829) #25 KCNK9 (ENSPCOG00000019979) #26 ENSPCOG00000023237 #27 ENSPCOG00000000504 FAM135B (ENSPCOG00000020978) #28 KHDRBS3 (ENSPCOG00000023667) #29 ZFAT (ENSPCOG00000025199) #30 ST3GAL1 (ENSPCOG00000024012) #31 NDRG1 (ENSPCOG00000018573) #32 CCN4 (ENSPCOG00000019770) #33 SLA (ENSPCOG00000010906) #34 TG (ENSPCOG00000012664) #35 Greater bamboo lemur DUPLICATION Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 549 ADGRB1 (ENSPSMG00000005190) #15 TSNARE1 (ENSPSMG00000005078) ENSPSMG00000005063 #17 PTP4A3 (ENSPSMG00000005053) #18 GPR20 (ENSPSMG00000005025) #19 SLC45A4 (ENSPSMG00000005020) #20 DENND3 (ENSPSMG00000004961) #21 ENSPSMG00000004909 #22 ENSPSMG00000004896 #22 Greater bamboo lemur MODERN SPECIES 549 ADGRB1 (ENSPSMG00000005190) #15 TSNARE1 (ENSPSMG00000005078) ENSPSMG00000005063 #17 PTP4A3 (ENSPSMG00000005053) #18 GPR20 (ENSPSMG00000005025) #19 SLC45A4 (ENSPSMG00000005020) #20 DENND3 (ENSPSMG00000004961) #21 ENSPSMG00000004909 #22 ENSPSMG00000004896 #22 Greater bamboo lemur MODERN SPECIES 2655 ENSPSMG00000004879 #22 Laurasiatheria ANCESTRAL SPECIES 63 ENSGT00970000197161 ENSGT00940000155113.a.a #22 ENSGT00970000197016 Laurasiatheria_a ANCESTRAL SPECIES 20 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT01040000240949 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Artiodactyla ANCESTRAL SPECIES 20 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT01040000240949 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Suina ANCESTRAL SPECIES 26 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT01040000240949 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Chacoan peccary MODERN SPECIES 114 GPR20 (ENSCWAG00000010586) #19 SLC45A4 (ENSCWAG00000010563) #20 ENSCWAG00000010537 #21 ENSCWAG00000010492 #21 PTK2 (ENSCWAG00000009396) #22 AGO2 (ENSCWAG00000009168) #23 CHRAC1 (ENSCWAG00000009130) #24 TRAPPC9 (ENSCWAG00000008968) #25 KCNK9 (ENSCWAG00000008928) #26 COL22A1 (ENSCWAG00000007875) FAM135B (ENSCWAG00000020207) #28 ENSCWAG00000020195 KHDRBS3 (ENSCWAG00000020158) #29 ZFAT (ENSCWAG00000020112) #30 ST3GAL1 (ENSCWAG00000020091) #31 NDRG1 (ENSCWAG00000020006) #32 CCN4 (ENSCWAG00000019971) #33 SLA (ENSCWAG00000019761) #34 TG (ENSCWAG00000019633) #35 PHF20L1 (ENSCWAG00000019548) #36 Pig MODERN SPECIES 12 LYPD2 (ENSSSCG00000036119) #8 ENSSSCG00000049907 #9 THEM6 (ENSSSCG00000032063) #10 PSCA (ENSSSCG00000035372) #11 JRK (ENSSSCG00000037975) #12 ARC (ENSSSCG00000038965) #13 ENSSSCG00000033726 #14 ADGRB1 (ENSSSCG00000035891) #15 ENSSSCG00000050724 ENSSSCG00000036022 MROH5 (ENSSSCG00000005928) #17 PTP4A3 (ENSSSCG00000036569) #18 GPR20 (ENSSSCG00000021284) #19 SLC45A4 (ENSSSCG00000005930) #20 DENND3 (ENSSSCG00000030831) #21 PTK2 (ENSSSCG00000038397) #22 AGO2 (ENSSSCG00000005935) #23 CHRAC1 (ENSSSCG00000005933) #24 TRAPPC9 (ENSSSCG00000005934) #25 ENSSSCG00000045313 KCNK9 (ENSSSCG00000033397) #26 COL22A1 (ENSSSCG00000005938) FAM135B (ENSSSCG00000005939) #28 KHDRBS3 (ENSSSCG00000005941) #29 ENSSSCG00000040767 ENSSSCG00000045339 ZFAT (ENSSSCG00000030947) #30 ST3GAL1 (ENSSSCG00000005943) #31 NDRG1 (ENSSSCG00000005944) #32 CCN4 (ENSSSCG00000005946) #33 TG (ENSSSCG00000005948) #35 Artiodactyla_a ANCESTRAL SPECIES 20 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Camelidae ANCESTRAL SPECIES 19 ENSGT00940000164325 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT01000000221687 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00940000168748 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Arabian camel MODERN SPECIES 17 SLURP2 (ENSCDRG00005013602) ENSCDRG00005013509 #8 SLURP1 (ENSCDRG00005013458) #9 THEM6 (ENSCDRG00005013436) #10 ENSCDRG00005013386 JRK (ENSCDRG00005013365) #12 ARC (ENSCDRG00005013348) #13 ENSCDRG00005013021 #14 ADGRB1 (ENSCDRG00005011321) #15 ENSCDRG00005011015 ENSCDRG00005010597 #17 PTP4A3 (ENSCDRG00005010470) #18 GPR20 (ENSCDRG00005010449) #19 SLC45A4 (ENSCDRG00005010392) #20 DENND3 (ENSCDRG00005010232) #21 PTK2 (ENSCDRG00005009649) #22 AGO2 (ENSCDRG00005009405) #23 ENSCDRG00005009352 TRAPPC9 (ENSCDRG00005009058) #25 KCNK9 (ENSCDRG00005008973) #26 COL22A1 (ENSCDRG00005008680) FAM135B (ENSCDRG00005008527) #28 KHDRBS3 (ENSCDRG00005008373) #29 ENSCDRG00005008302 ZFAT (ENSCDRG00005007628) #30 ST3GAL1 (ENSCDRG00005007522) #31 NDRG1 (ENSCDRG00005007109) #32 CCN4 (ENSCDRG00005007039) #33 SLA (ENSCDRG00005006863) #34 TG (ENSCDRG00005006354) #35 PHF20L1 (ENSCDRG00005006230) #36 Alpaca MODERN SPECIES 1858 ENSVPAG00000007944 #22 Artiodactyla_b ANCESTRAL SPECIES 20 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240949 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Pecora ANCESTRAL SPECIES 20 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240949 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00970000194344 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Percora_a ANCESTRAL SPECIES 23 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240949 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00970000194344 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Bovidae ANCESTRAL SPECIES 22 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240949 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00970000194344 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Caprinae ANCESTRAL SPECIES 18 ENSGT00730000111571.`b.a #7 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00970000194344 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Goat MODERN SPECIES 5 LY6E (ENSCHIG00000005488) ##11 CYP11B1 (ENSCHIG00000012278) GML (ENSCHIG00000015469) ENSCHIG00000021920 LYNX1 (ENSCHIG00000014052) #7 LYPD2 (ENSCHIG00000014595) #8 TSNARE1 (ENSCHIG00000023914) ADGRB1 (ENSCHIG00000018848) #15 ENSCHIG00000009651 #14 ARC (ENSCHIG00000007715) #13 MROH5 (ENSCHIG00000021884) #17 PTP4A3 (ENSCHIG00000008896) #18 GPR20 (ENSCHIG00000008984) #19 SLC45A4 (ENSCHIG00000021060) #20 DENND3 (ENSCHIG00000008841) #21 PTK2 (ENSCHIG00000013943) #22 AGO2 (ENSCHIG00000010156) #23 ENSCHIG00000017172 #24 TRAPPC9 (ENSCHIG00000012324) #25 KCNK9 (ENSCHIG00000022281) #26 FAM135B (ENSCHIG00000016457) #28 ENSCHIG00000019586 KHDRBS3 (ENSCHIG00000016533) #29 ZFAT (ENSCHIG00000013122) #30 ST3GAL1 (ENSCHIG00000021799) #31 NDRG1 (ENSCHIG00000015852) #32 CCN4 (ENSCHIG00000012315) #33 SLA (ENSCHIG00000017077) #34 TG (ENSCHIG00000026405) #35 PHF20L1 (ENSCHIG00000009054) #36 TMEM71 (ENSCHIG00000013935) #37 Rambouillet Sheep MODERN SPECIES 25 ENSOARG00020013707 LY6D (ENSOARG00020013889) ENSOARG00020013946 #7 LYPD2 (ENSOARG00020013987) #8 SLURP1 (ENSOARG00020014023) #9 THEM6 (ENSOARG00020014092) #10 PSCA (ENSOARG00020014124) #11 ENSOARG00020014189 ARC (ENSOARG00020003055) #13 ENSOARG00020003095 #14 ADGRB1 (ENSOARG00020003350) #15 C8orf90 (ENSOARG00020003638) #16 ENSOARG00020003672 #17 PTP4A3 (ENSOARG00020003791) #18 GPR20 (ENSOARG00020003852) #19 PTK2 (ENSOARG00020004232) #22 AGO2 (ENSOARG00020005189) #23 CHRAC1 (ENSOARG00020005226) #24 TRAPPC9 (ENSOARG00020005244) #25 ENSOARG00020005279 KCNK9 (ENSOARG00020005293) #26 COL22A1 (ENSOARG00020005316) FAM135B (ENSOARG00020005425) #28 ENSOARG00020005451 ENSOARG00020005461 KHDRBS3 (ENSOARG00020005495) #29 ZFAT (ENSOARG00020005657) #30 ST3GAL1 (ENSOARG00020005893) #31 NDRG1 (ENSOARG00020005943) #32 TG (ENSOARG00020006257) #35 SLA (ENSOARG00020006379) #34 Bovinae ANCESTRAL SPECIES 18 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240949 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT01080000258935 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Bos ANCESTRAL SPECIES 21 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240949 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT01080000258935 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Bos_b ANCESTRAL SPECIES 25 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240949 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159300 #35 ENSGT00940000159104 #34 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Hybrid Bos Indicus MODERN SPECIES 5 SLURP1 (ENSBIXG00005030483) #9 THEM6 (ENSBIXG00005030488) #10 PSCA (ENSBIXG00005030492) #11 JRK (ENSBIXG00005030497) #12 ARC (ENSBIXG00005030501) #13 ENSBIXG00005030522 #14 ADGRB1 (ENSBIXG00005030562) #15 ENSBIXG00005030595 C8orf90 (ENSBIXG00005030674) #16 ENSBIXG00005030691 #17 PTP4A3 (ENSBIXG00005030720) #18 ENSBIXG00005030733 GPR20 (ENSBIXG00005030738) #19 SLC45A4 (ENSBIXG00005030748) #20 DENND3 (ENSBIXG00005030786) #21 PTK2 (ENSBIXG00005030896) #22 AGO2 (ENSBIXG00005031025) #23 CHRAC1 (ENSBIXG00005031033) #24 TRAPPC9 (ENSBIXG00005031060) #25 ENSBIXG00005031093 #26 COL22A1 (ENSBIXG00005031109) FAM135B (ENSBIXG00005031125) #28 KHDRBS3 (ENSBIXG00005031144) #29 ZFAT (ENSBIXG00005031165) #30 NDRG1 (ENSBIXG00005031191) #32 CCN4 (ENSBIXG00005031198) #33 TG (ENSBIXG00005031209) #35 ENSBIXG00005031228 SLA (ENSBIXG00005031229) #34 PHF20L1 (ENSBIXG00005031232) #36 TMEM71 (ENSBIXG00005031248) #37 Cow MODERN SPECIES 5 LYPD2 (ENSBTAG00000016210) #8 SLURP1 (ENSBTAG00000016209) #9 THEM6 (ENSBTAG00000005063) #10 PSCA (ENSBTAG00000047022) #11 JRK (ENSBTAG00000055204) #12 ARC (ENSBTAG00000021639) #13 ENSBTAG00000026340 #14 ADGRB1 (ENSBTAG00000006385) #15 TSNARE1 (ENSBTAG00000009974) ENSBTAG00000046739 #17 PTP4A3 (ENSBTAG00000046467) #18 ENSBTAG00000050186 GPR20 (ENSBTAG00000015985) #19 SLC45A4 (ENSBTAG00000008597) #20 DENND3 (ENSBTAG00000006132) #21 PTK2 (ENSBTAG00000009578) #22 AGO2 (ENSBTAG00000001579) #23 CHRAC1 (ENSBTAG00000020226) #24 TRAPPC9 (ENSBTAG00000013955) #25 KCNK9 (ENSBTAG00000047488) #26 FAM135B (ENSBTAG00000018218) #28 KHDRBS3 (ENSBTAG00000002181) #29 ZFAT (ENSBTAG00000017731) #30 ST3GAL1 (ENSBTAG00000001156) #31 NDRG1 (ENSBTAG00000000711) #32 CCN4 (ENSBTAG00000000707) #33 TG (ENSBTAG00000007823) #35 SLA (ENSBTAG00000007828) #34 PHF20L1 (ENSBTAG00000006869) #36 TMEM71 (ENSBTAG00000017138) #37 DNAAF11 (ENSBTAG00000010548) Bos_a ANCESTRAL SPECIES 43 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT01080000258935 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Domestic yak MODERN SPECIES 9 ENSBGRG00000004207 #9 THEM6 (ENSBGRG00000004183) #10 PSCA (ENSBGRG00000004142) #11 JRK (ENSBGRG00000004131) #12 ENSBGRG00000003858 #14 ENSBGRG00000003810 #15 ENSBGRG00000025275 ENSBGRG00000025252 ENSBGRG00000025239 C8orf90 (ENSBGRG00000025227) #16 ENSBGRG00000025197 #17 PTP4A3 (ENSBGRG00000025148) #18 GPR20 (ENSBGRG00000025134) #19 SLC45A4 (ENSBGRG00000025114) #20 DENND3 (ENSBGRG00000025049) #21 PTK2 (ENSBGRG00000024620) #22 AGO2 (ENSBGRG00000024431) #23 ENSBGRG00000024390 #24 ENSBGRG00000024372 TRAPPC9 (ENSBGRG00000024227) #25 KCNK9 (ENSBGRG00000024198) #26 ENSBGRG00000024178 COL22A1 (ENSBGRG00000024054) FAM135B (ENSBGRG00000023910) #28 ENSBGRG00000023891 KHDRBS3 (ENSBGRG00000023782) #29 ZFAT (ENSBGRG00000022983) #30 ST3GAL1 (ENSBGRG00000022921) #31 NDRG1 (ENSBGRG00000022630) #32 CCN4 (ENSBGRG00000022540) #33 SLA (ENSBGRG00000022497) #34 Wild yak MODERN SPECIES 2653 ENSBMUG00000012467 #18 SLC45A4 (ENSBMUG00000012601) #20 DENND3 (ENSBMUG00000012683) #21 PTK2 (ENSBMUG00000012877) #22 AGO2 (ENSBMUG00000013938) #23 ENSBMUG00000014619 #24 TRAPPC9 (ENSBMUG00000015181) #25 American bison MODERN SPECIES 2974 GPR20 (ENSBBBG00000017735) #19 SLC45A4 (ENSBBBG00000017777) #20 DENND3 (ENSBBBG00000017864) #21 PTK2 (ENSBBBG00000018376) #22 AGO2 (ENSBBBG00000018521) #23 ENSBBBG00000018534 TRAPPC9 (ENSBBBG00000004601) #25 KCNK9 (ENSBBBG00000004606) #26 ENSBBBG00000018603 COL22A1 (ENSBBBG00000004714) FAM135B (ENSBBBG00000004741) #28 KHDRBS3 (ENSBBBG00000018860) #29 ZFAT (ENSBBBG00000004834) #30 ST3GAL1 (ENSBBBG00000019019) #31 NDRG1 (ENSBBBG00000019091) #32 CCN4 (ENSBBBG00000019109) #33 SLA (ENSBBBG00000019161) #34 TG (ENSBBBG00000004969) #35 PHF20L1 (ENSBBBG00000019353) #36 Siberian musk deer MODERN SPECIES 141 ENSMMSG00000000931 #18 GPR20 (ENSMMSG00000000914) #19 SLC45A4 (ENSMMSG00000000861) #20 DENND3 (ENSMMSG00000000721) #21 PTK2 (ENSMMSG00000000298) #22 AGO2 (ENSMMSG00000000171) #23 CHRAC1 (ENSMMSG00000000143) #24 ENSMMSG00000000132 ENSMMSG00000000120 TRAPPC9 (ENSMMSG00000000096) #25 KCNK9 (ENSMMSG00000000011) #26 COL22A1 (ENSMMSG00000021268) ENSMMSG00000021170 FAM135B (ENSMMSG00000021096) #28 ENSMMSG00000021071 KHDRBS3 (ENSMMSG00000020977) #29 ZFAT (ENSMMSG00000020835) #30 ST3GAL1 (ENSMMSG00000020803) #31 NDRG1 (ENSMMSG00000020575) #32 CCN4 (ENSMMSG00000020505) #33 Yarkand deer MODERN SPECIES 13 LY6D (ENSCHYG00000013937) ENSCHYG00000013973 #7 LYPD2 (ENSCHYG00000014023) #8 SLURP1 (ENSCHYG00000014068) #9 THEM6 (ENSCHYG00000014103) #10 ENSCHYG00000014131 JRK (ENSCHYG00000014190) #12 ARC (ENSCHYG00000014210) #13 ENSCHYG00000014280 #14 ADGRB1 (ENSCHYG00000014800) #15 ENSCHYG00000015154 ENSCHYG00000016037 #18 SLC45A4 (ENSCHYG00000016290) #20 DENND3 (ENSCHYG00000016570) #21 ENSCHYG00000017231 PTK2 (ENSCHYG00000017386) #22 ENSCHYG00000019424 AGO2 (ENSCHYG00000019522) #23 ENSCHYG00000019694 ENSCHYG00000019730 TRAPPC9 (ENSCHYG00000019843) #25 ENSCHYG00000021286 KCNK9 (ENSCHYG00000021309) #26 ENSCHYG00000021373 #27 FAM135B (ENSCHYG00000021644) #28 KHDRBS3 (ENSCHYG00000021821) #29 ENSCHYG00000021946 ZFAT (ENSCHYG00000021984) #30 ST3GAL1 (ENSCHYG00000022312) #31 NDRG1 (ENSCHYG00000022407) #32 CCN4 (ENSCHYG00000022627) #33 Cetacea ANCESTRAL SPECIES 17 ENSGT00730000111514 ENSGT00730000111571.ab #7 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000159581 #18 ENSGT01040000240949 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00500000045333.c.b.a.a ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00390000017996.b.a ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Blue whale MODERN SPECIES 8 ENSBMSG00010013395 ENSBMSG00010013421 LY6D (ENSBMSG00010013458) LYNX1 (ENSBMSG00010013471) #7 SLURP1 (ENSBMSG00010013497) #9 THEM6 (ENSBMSG00010013507) #10 PSCA (ENSBMSG00010013514) #11 JRK (ENSBMSG00010013525) #12 ARC (ENSBMSG00010013531) #13 ADGRB1 (ENSBMSG00010013553) #15 TSNARE1 (ENSBMSG00010013598) PTP4A3 (ENSBMSG00010013679) #18 GPR20 (ENSBMSG00010013686) #19 SLC45A4 (ENSBMSG00010013703) #20 DENND3 (ENSBMSG00010013733) #21 PTK2 (ENSBMSG00010014034) #22 AGO2 (ENSBMSG00010014922) #23 CHRAC1 (ENSBMSG00010015044) #24 TRAPPC9 (ENSBMSG00010015081) #25 ENSBMSG00010015118 KCNK9 (ENSBMSG00010015140) #26 COL22A1 (ENSBMSG00010015241) FAM135B (ENSBMSG00010015786) #28 ENSBMSG00010015876 #29 ZFAT (ENSBMSG00010015973) #30 ENSBMSG00010016853 ST3GAL1 (ENSBMSG00010016866) #31 NDRG1 (ENSBMSG00010016901) #32 CCN4 (ENSBMSG00010016943) #33 ENSBMSG00010016990 #35 SLA (ENSBMSG00010017050) #34 Odontoceti ANCESTRAL SPECIES 20 ENSGT00730000111514 ENSGT00730000111571.ab #7 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000159581 #18 ENSGT01040000240949 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00500000045333.c.b.a.a ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00390000017996.b.a ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Sperm whale MODERN SPECIES 6 ZFP41 (ENSPCTG00005014395) LY6H (ENSPCTG00005014505) LY6E (ENSPCTG00005014593) ##11 ENSPCTG00005014680 ENSPCTG00005014909 ENSPCTG00005014963 TSNARE1 (ENSPCTG00005014986) ADGRB1 (ENSPCTG00005015167) #15 ARC (ENSPCTG00005015916) #13 JRK (ENSPCTG00005015935) #12 PSCA (ENSPCTG00005015964) #11 THEM6 (ENSPCTG00005015996) #10 SLC45A4 (ENSPCTG00005016157) #20 ENSPCTG00005016197 ENSPCTG00005016216 #21 PTK2 (ENSPCTG00005016344) #22 AGO2 (ENSPCTG00005017440) #23 ENSPCTG00005017514 CHRAC1 (ENSPCTG00005017581) #24 TRAPPC9 (ENSPCTG00005017633) #25 ENSPCTG00005017670 #26 COL22A1 (ENSPCTG00005017754) FAM135B (ENSPCTG00005018956) #28 KHDRBS3 (ENSPCTG00005019130) #29 ZFAT (ENSPCTG00005019229) #30 TG (ENSPCTG00005019930) #35 PHF20L1 (ENSPCTG00005020226) #36 TMEM71 (ENSPCTG00005020318) #37 LRRC6 (ENSPCTG00005020472) HHLA1 (ENSPCTG00005020844) ENSPCTG00005020919 Odontoceti_a DUPLICATION Odontoceti_a ANCESTRAL SPECIES 97 ENSGT00970000197161 ENSGT00940000155113.a.a.y #22 Odontoceti_b ANCESTRAL SPECIES 67 ENSGT00970000197161 ENSGT00940000155113.a.a.y #22 Monodontidae ANCESTRAL SPECIES 72 ENSGT00970000197161 ENSGT00940000155113.a.a.y #22 Beluga whale MODERN SPECIES 57 LYNX1 (ENSDLEG00000016418) #7 ENSDLEG00000016398 #9 THEM6 (ENSDLEG00000016390) #10 PSCA (ENSDLEG00000016377) #11 JRK (ENSDLEG00000016371) #12 ARC (ENSDLEG00000016365) #13 ENSDLEG00000016305 #15 ENSDLEG00000016197 PTP4A3 (ENSDLEG00000016173) #18 GPR20 (ENSDLEG00000016169) #19 SLC45A4 (ENSDLEG00000016143) #20 DENND3 (ENSDLEG00000016097) #21 ENSDLEG00000016087 #22 ENSDLEG00000016056 ENSDLEG00000016039 ENSDLEG00000016027 #22 AGO2 (ENSDLEG00000015375) #23 CHRAC1 (ENSDLEG00000015313) #24 ENSDLEG00000015306 TRAPPC9 (ENSDLEG00000014691) #25 KCNK9 (ENSDLEG00000014643) #26 ENSDLEG00000014618 FAM135B (ENSDLEG00000014488) #28 KHDRBS3 (ENSDLEG00000014471) #29 ENSDLEG00000014454 ZFAT (ENSDLEG00000014402) #30 ENSDLEG00000014389 ST3GAL1 (ENSDLEG00000014361) #31 ENSDLEG00000014340 #33 NDRG1 (ENSDLEG00000014229) #32 ENSDLEG00000014206 #33 Odontoceti_a ANCESTRAL SPECIES 17 ENSGT00730000111514 ENSGT00730000111571.ab #7 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000159581 #18 ENSGT01040000240949 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a.z #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00500000045333.c.b.a.a ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00390000017996.b.a ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Dolphin MODERN SPECIES 1763 PTK2 (ENSTTRG00000009800) #22 Odontoceti_b ANCESTRAL SPECIES 19 ENSGT00730000111514 ENSGT00730000111571.ab #7 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000159581 #18 ENSGT01040000240949 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a.z #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00500000045333.c.b.a.a ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00390000017996.b.a ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Vaquita MODERN SPECIES 8 LYNX1 (ENSPSNG00000016038) #7 SLURP1 (ENSPSNG00000015902) #9 THEM6 (ENSPSNG00000015842) #10 PSCA (ENSPSNG00000015788) #11 JRK (ENSPSNG00000015768) #12 ARC (ENSPSNG00000015743) #13 ADGRB1 (ENSPSNG00000015054) #15 TSNARE1 (ENSPSNG00000015005) C8orf90 (ENSPSNG00000014801) #16 PTP4A3 (ENSPSNG00000014669) #18 ENSPSNG00000014557 GPR20 (ENSPSNG00000014525) #19 SLC45A4 (ENSPSNG00000014498) #20 ENSPSNG00000014438 #21 ENSPSNG00000014401 #21 PTK2 (ENSPSNG00000014133) #22 AGO2 (ENSPSNG00000013974) #23 CHRAC1 (ENSPSNG00000013879) #24 ENSPSNG00000013845 TRAPPC9 (ENSPSNG00000013768) #25 KCNK9 (ENSPSNG00000013694) #26 COL22A1 (ENSPSNG00000012298) FAM135B (ENSPSNG00000011969) #28 KHDRBS3 (ENSPSNG00000011841) #29 ZFAT (ENSPSNG00000011653) #30 ENSPSNG00000011623 ENSPSNG00000011603 ST3GAL1 (ENSPSNG00000011560) #31 NDRG1 (ENSPSNG00000018164) #32 CCN4 (ENSPSNG00000018093) #33 SLA (ENSPSNG00000017911) #34 Monodontidae ANCESTRAL SPECIES 20 ENSGT00940000161506 ENSGT00940000159966.B ENSGT00730000111514 ENSGT00730000111571.ab #7 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a.z #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00500000045333.c.b.a.a ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00500000045333.d ENSGT00940000156658 #30 ENSGT00390000017996.b.a ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 Beluga whale MODERN SPECIES 57 ENSDLEG00000016457 ENSDLEG00000016432 LY6D (ENSDLEG00000016424) LYNX1 (ENSDLEG00000016418) #7 ENSDLEG00000016398 #9 THEM6 (ENSDLEG00000016390) #10 PSCA (ENSDLEG00000016377) #11 JRK (ENSDLEG00000016371) #12 ARC (ENSDLEG00000016365) #13 ENSDLEG00000016305 #15 ENSDLEG00000016197 PTP4A3 (ENSDLEG00000016173) #18 GPR20 (ENSDLEG00000016169) #19 SLC45A4 (ENSDLEG00000016143) #20 DENND3 (ENSDLEG00000016097) #21 ENSDLEG00000016087 #22 ENSDLEG00000016056 ENSDLEG00000016039 ENSDLEG00000016027 #22 AGO2 (ENSDLEG00000015375) #23 CHRAC1 (ENSDLEG00000015313) #24 ENSDLEG00000015306 TRAPPC9 (ENSDLEG00000014691) #25 KCNK9 (ENSDLEG00000014643) #26 ENSDLEG00000014618 FAM135B (ENSDLEG00000014488) #28 KHDRBS3 (ENSDLEG00000014471) #29 ENSDLEG00000014454 ZFAT (ENSDLEG00000014402) #30 ENSDLEG00000014389 ST3GAL1 (ENSDLEG00000014361) #31 Narwhal MODERN SPECIES 300 ADGRB1 (ENSMMNG00015002662) #15 ENSMMNG00015002753 ENSMMNG00015002865 #18 GPR20 (ENSMMNG00015002887) #19 SLC45A4 (ENSMMNG00015002902) #20 DENND3 (ENSMMNG00015002943) #21 PTK2 (ENSMMNG00015003058) #22 AGO2 (ENSMMNG00015003211) #23 CHRAC1 (ENSMMNG00015003266) #24 TRAPPC9 (ENSMMNG00015003298) #25 ENSMMNG00015003369 KCNK9 (ENSMMNG00015003378) #26 ENSMMNG00015003507 #27 FAM135B (ENSMMNG00015003770) #28 ENSMMNG00015003849 #29 ENSMMNG00015003895 ZFAT (ENSMMNG00015003925) #30 ENSMMNG00015003987 ST3GAL1 (ENSMMNG00015004001) #31 NDRG1 (ENSMMNG00015004018) #32 CCN4 (ENSMMNG00015004060) #33 TG (ENSMMNG00015004111) #35 Laurasiatheria_b ANCESTRAL SPECIES 20 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT01040000240949 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Laurasiatheria_c ANCESTRAL SPECIES 19 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Equus ANCESTRAL SPECIES 14 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Horse MODERN SPECIES 30 LY6D (ENSECAG00000006509) LYPD2 (ENSECAG00000031561) #8 THEM6 (ENSECAG00000037572) #10 JRK (ENSECAG00000006063) #12 ARC (ENSECAG00000001167) #13 ENSECAG00000021955 #14 ADGRB1 (ENSECAG00000031963) #15 ENSECAG00000053596 TSNARE1 (ENSECAG00000017952) MROH5 (ENSECAG00000015811) #17 PTP4A3 (ENSECAG00000030951) #18 GPR20 (ENSECAG00000006027) #19 SLC45A4 (ENSECAG00000002520) #20 DENND3 (ENSECAG00000014691) #21 ENSECAG00000044322 PTK2 (ENSECAG00000014150) #22 AGO2 (ENSECAG00000006078) #23 CHRAC1 (ENSECAG00000059937) #24 TRAPPC9 (ENSECAG00000024191) #25 KCNK9 (ENSECAG00000024032) #26 COL22A1 (ENSECAG00000041368) FAM135B (ENSECAG00000011375) #28 KHDRBS3 (ENSECAG00000010194) #29 ZFAT (ENSECAG00000024767) #30 ENSECAG00000005903 ST3GAL1 (ENSECAG00000021364) #31 NDRG1 (ENSECAG00000025129) #32 CCN4 (ENSECAG00000025050) #33 SLA (ENSECAG00000024065) #34 TG (ENSECAG00000018808) #35 PHF20L1 (ENSECAG00000015107) #36 Donkey MODERN SPECIES 3 LYNX1 (ENSEASG00005023610) #7 LYPD2 (ENSEASG00005021073) #8 THEM6 (ENSEASG00005021076) #10 JRK (ENSEASG00005032295) #12 PSCA (ENSEASG00005038256) #11 ARC (ENSEASG00005021082) #13 ENSEASG00005021088 #14 ENSEASG00005021101 #15 ENSEASG00005021106 TSNARE1 (ENSEASG00005021107) MROH5 (ENSEASG00005025679) #17 ENSEASG00005029842 #18 GPR20 (ENSEASG00005021116) #19 SLC45A4 (ENSEASG00005021121) #20 DENND3 (ENSEASG00005021125) #21 PTK2 (ENSEASG00005021317) #22 AGO2 (ENSEASG00005021922) #23 ENSEASG00005021924 #24 TRAPPC9 (ENSEASG00005021944) #25 KCNK9 (ENSEASG00005027390) #26 ENSEASG00005022014 #27 FAM135B (ENSEASG00005022017) #28 KHDRBS3 (ENSEASG00005022023) #29 ZFAT (ENSEASG00005022029) #30 ST3GAL1 (ENSEASG00005022034) #31 NDRG1 (ENSEASG00005022036) #32 CCN4 (ENSEASG00005026762) #33 TG (ENSEASG00005022050) #35 SLA (ENSEASG00005022081) #34 PHF20L1 (ENSEASG00005022090) #36 TMEM71 (ENSEASG00005022099) #37 Chiroptera ANCESTRAL SPECIES 27 ENSGT00940000159966.A ENSGT00730000111514 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300.i #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Megabat MODERN SPECIES 3800 PTK2 (ENSPVAG00000013240) #22 AGO2 (ENSPVAG00000013238) #23 ENSPVAG00000013237 Microchiroptera ANCESTRAL SPECIES 27 ENSGT00940000159966.A ENSGT00730000111514 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300.i #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Microbat MODERN SPECIES 1860 PTK2 (ENSMLUG00000010955) #22 Greater horseshoe bat MODERN SPECIES 5 GML (ENSRFEG00010014964) LY6D (ENSRFEG00010014919) ENSRFEG00010014878 #7 ENSRFEG00010014807 #8 THEM6 (ENSRFEG00010014784) #10 PSCA (ENSRFEG00010014722) #11 ARC (ENSRFEG00010014689) #13 ENSRFEG00010014339 #14 ADGRB1 (ENSRFEG00010014260) #15 ENSRFEG00010014108 MROH5 (ENSRFEG00010013403) #17 PTP4A3 (ENSRFEG00010013219) #18 GPR20 (ENSRFEG00010013194) #19 SLC45A4 (ENSRFEG00010013173) #20 DENND3 (ENSRFEG00010013101) #21 PTK2 (ENSRFEG00010012778) #22 AGO2 (ENSRFEG00010012643) #23 ENSRFEG00010012598 #24 TRAPPC9 (ENSRFEG00010012544) #25 KCNK9 (ENSRFEG00010012493) #26 ENSRFEG00010012449 COL22A1 (ENSRFEG00010010793) FAM135B (ENSRFEG00010010527) #28 KHDRBS3 (ENSRFEG00010010339) #29 ZFAT (ENSRFEG00010019385) #30 ST3GAL1 (ENSRFEG00010019333) #31 NDRG1 (ENSRFEG00010019263) #32 CCN4 (ENSRFEG00010019132) #33 SLA (ENSRFEG00010019049) #34 TG (ENSRFEG00010018495) #35 PHF20L1 (ENSRFEG00010018338) #36 Carnivora ANCESTRAL SPECIES 22 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT01040000240949 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Felidae ANCESTRAL SPECIES 22 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Cat MODERN SPECIES 249 LYPD2 (ENSFCAG00000000126) #8 ENSFCAG00000046944 SLURP1 (ENSFCAG00000032332) #9 THEM6 (ENSFCAG00000041926) #10 PSCA (ENSFCAG00000034685) #11 JRK (ENSFCAG00000038987) #12 ARC (ENSFCAG00000034460) #13 ENSFCAG00000028159 #14 ADGRB1 (ENSFCAG00000005068) #15 TSNARE1 (ENSFCAG00000010752) MROH5 (ENSFCAG00000023728) #17 PTP4A3 (ENSFCAG00000038613) #18 GPR20 (ENSFCAG00000028327) #19 SLC45A4 (ENSFCAG00000010846) #20 DENND3 (ENSFCAG00000015503) #21 PTK2 (ENSFCAG00000014619) #22 AGO2 (ENSFCAG00000002782) #23 ENSFCAG00000040400 TRAPPC9 (ENSFCAG00000023103) #25 KCNK9 (ENSFCAG00000045680) #26 ENSFCAG00000040466 #27 FAM135B (ENSFCAG00000005044) #28 ENSFCAG00000050142 KHDRBS3 (ENSFCAG00000000229) #29 ZFAT (ENSFCAG00000008065) #30 ST3GAL1 (ENSFCAG00000021902) #31 ENSFCAG00000053692 NDRG1 (ENSFCAG00000003212) #32 CCN4 (ENSFCAG00000025709) #33 SLA (ENSFCAG00000041504) #34 TG (ENSFCAG00000011954) #35 Panthera ANCESTRAL SPECIES 16 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159300 #35 ENSGT00940000159104 #34 ENSGT00940000177637 ENSGT00940000156215.f #36 Panthera_a ANCESTRAL SPECIES 16 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159300 #35 ENSGT00940000159104 #34 ENSGT00940000177637 ENSGT00940000156215.f #36 leopard MODERN SPECIES 34 SLURP2 (ENSPPRG00000006355) LYPD2 (ENSPPRG00000006318) #8 THEM6 (ENSPPRG00000006288) #10 PSCA (ENSPPRG00000006245) #11 JRK (ENSPPRG00000019858) #12 ARC (ENSPPRG00000019836) #13 ENSPPRG00000005979 #14 ADGRB1 (ENSPPRG00000005715) #15 TSNARE1 (ENSPPRG00000005532) C8orf90 (ENSPPRG00000004827) #16 ENSPPRG00000004804 #17 PTP4A3 (ENSPPRG00000004614) #18 GPR20 (ENSPPRG00000019718) #19 SLC45A4 (ENSPPRG00000004447) #20 DENND3 (ENSPPRG00000004322) #21 PTK2 (ENSPPRG00000003723) #22 AGO2 (ENSPPRG00000002594) #23 CHRAC1 (ENSPPRG00000002557) #24 TRAPPC9 (ENSPPRG00000002462) #25 KCNK9 (ENSPPRG00000002390) #26 ENSPPRG00000002336 #27 FAM135B (ENSPPRG00000001493) #28 KHDRBS3 (ENSPPRG00000001453) #29 ZFAT (ENSPPRG00000001340) #30 ST3GAL1 (ENSPPRG00000001242) #31 NDRG1 (ENSPPRG00000001214) #32 CCN4 (ENSPPRG00000001054) #33 ENSPPRG00000000896 #35 SLA (ENSPPRG00000000784) #34 PHF20L1 (ENSPPRG00000000672) #36 TMEM71 (ENSPPRG00000000497) #37 lion MODERN SPECIES 509 ENSPLOG00000000620 LYPD2 (ENSPLOG00000000629) #8 SLURP1 (ENSPLOG00000000637) #9 THEM6 (ENSPLOG00000000652) #10 ENSPLOG00000000668 JRK (ENSPLOG00000000682) #12 ARC (ENSPLOG00000000689) #13 ENSPLOG00000000720 #14 ADGRB1 (ENSPLOG00000000796) #15 TSNARE1 (ENSPLOG00000000885) ENSPLOG00000000982 #17 PTP4A3 (ENSPLOG00000001029) #18 GPR20 (ENSPLOG00000001055) #19 SLC45A4 (ENSPLOG00000001065) #20 DENND3 (ENSPLOG00000001097) #21 PTK2 (ENSPLOG00000001166) #22 AGO2 (ENSPLOG00000001314) #23 ENSPLOG00000001430 TRAPPC9 (ENSPLOG00000001450) #25 KCNK9 (ENSPLOG00000001475) #26 ENSPLOG00000001514 #27 FAM135B (ENSPLOG00000001634) #28 KHDRBS3 (ENSPLOG00000001681) #29 ZFAT (ENSPLOG00000001780) #30 ST3GAL1 (ENSPLOG00000001917) #31 NDRG1 (ENSPLOG00000001945) #32 CCN4 (ENSPLOG00000002016) #33 ENSPLOG00000002060 #35 SLA (ENSPLOG00000002109) #34 ENSPLOG00000002148 PHF20L1 (ENSPLOG00000002187) #36 Tiger DUPLICATION Tiger DUPLICATION Tiger MODERN SPECIES 31 LYNX1 (ENSPTIG00000009264) #7 LYPD2 (ENSPTIG00000009254) #8 PSCA (ENSPTIG00000009204) #11 ENSPTIG00000008773 ENSPTIG00000008655 #17 PTP4A3 (ENSPTIG00000008574) #18 SLC45A4 (ENSPTIG00000008447) #20 DENND3 (ENSPTIG00000008002) #21 ENSPTIG00000007956 #22 ENSPTIG00000007841 #22 ENSPTIG00000007828 #22 ENSPTIG00000007717 #22 AGO2 (ENSPTIG00000007438) #23 CHRAC1 (ENSPTIG00000007374) #24 TRAPPC9 (ENSPTIG00000007222) #25 KCNK9 (ENSPTIG00000006923) #26 COL22A1 (ENSPTIG00000005876) FAM135B (ENSPTIG00000005576) #28 KHDRBS3 (ENSPTIG00000005373) #29 ZFAT (ENSPTIG00000003779) #30 ST3GAL1 (ENSPTIG00000002565) #31 NDRG1 (ENSPTIG00000019803) #32 CCN4 (ENSPTIG00000019683) #33 SLA (ENSPTIG00000019360) #34 ENSPTIG00000019133 #35 Tiger MODERN SPECIES 31 LYNX1 (ENSPTIG00000009264) #7 LYPD2 (ENSPTIG00000009254) #8 PSCA (ENSPTIG00000009204) #11 ENSPTIG00000008773 ENSPTIG00000008655 #17 PTP4A3 (ENSPTIG00000008574) #18 SLC45A4 (ENSPTIG00000008447) #20 DENND3 (ENSPTIG00000008002) #21 ENSPTIG00000007956 #22 ENSPTIG00000007841 #22 ENSPTIG00000007828 #22 ENSPTIG00000007717 #22 AGO2 (ENSPTIG00000007438) #23 CHRAC1 (ENSPTIG00000007374) #24 TRAPPC9 (ENSPTIG00000007222) #25 KCNK9 (ENSPTIG00000006923) #26 COL22A1 (ENSPTIG00000005876) FAM135B (ENSPTIG00000005576) #28 KHDRBS3 (ENSPTIG00000005373) #29 ZFAT (ENSPTIG00000003779) #30 ST3GAL1 (ENSPTIG00000002565) #31 NDRG1 (ENSPTIG00000019803) #32 CCN4 (ENSPTIG00000019683) #33 SLA (ENSPTIG00000019360) #34 Tiger DUPLICATION Tiger MODERN SPECIES 31 LYNX1 (ENSPTIG00000009264) #7 LYPD2 (ENSPTIG00000009254) #8 PSCA (ENSPTIG00000009204) #11 ENSPTIG00000008773 ENSPTIG00000008655 #17 PTP4A3 (ENSPTIG00000008574) #18 SLC45A4 (ENSPTIG00000008447) #20 DENND3 (ENSPTIG00000008002) #21 ENSPTIG00000007956 #22 ENSPTIG00000007841 #22 ENSPTIG00000007828 #22 ENSPTIG00000007717 #22 AGO2 (ENSPTIG00000007438) #23 CHRAC1 (ENSPTIG00000007374) #24 TRAPPC9 (ENSPTIG00000007222) #25 KCNK9 (ENSPTIG00000006923) #26 COL22A1 (ENSPTIG00000005876) FAM135B (ENSPTIG00000005576) #28 KHDRBS3 (ENSPTIG00000005373) #29 ZFAT (ENSPTIG00000003779) #30 ST3GAL1 (ENSPTIG00000002565) #31 NDRG1 (ENSPTIG00000019803) #32 CCN4 (ENSPTIG00000019683) #33 SLA (ENSPTIG00000019360) #34 ENSPTIG00000019133 #35 PHF20L1 (ENSPTIG00000018849) #36 TMEM71 (ENSPTIG00000018244) #37 Tiger MODERN SPECIES 31 LYNX1 (ENSPTIG00000009264) #7 LYPD2 (ENSPTIG00000009254) #8 PSCA (ENSPTIG00000009204) #11 ENSPTIG00000008773 ENSPTIG00000008655 #17 PTP4A3 (ENSPTIG00000008574) #18 SLC45A4 (ENSPTIG00000008447) #20 DENND3 (ENSPTIG00000008002) #21 ENSPTIG00000007956 #22 ENSPTIG00000007841 #22 ENSPTIG00000007828 #22 ENSPTIG00000007717 #22 AGO2 (ENSPTIG00000007438) #23 CHRAC1 (ENSPTIG00000007374) #24 TRAPPC9 (ENSPTIG00000007222) #25 KCNK9 (ENSPTIG00000006923) #26 COL22A1 (ENSPTIG00000005876) FAM135B (ENSPTIG00000005576) #28 KHDRBS3 (ENSPTIG00000005373) #29 ZFAT (ENSPTIG00000003779) #30 ST3GAL1 (ENSPTIG00000002565) #31 NDRG1 (ENSPTIG00000019803) #32 CCN4 (ENSPTIG00000019683) #33 SLA (ENSPTIG00000019360) #34 ENSPTIG00000019133 #35 PHF20L1 (ENSPTIG00000018849) #36 Caniformia ANCESTRAL SPECIES 23 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT01040000240949 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Canidae ANCESTRAL SPECIES 33 ENSGT00940000164325 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Canis_lupus ANCESTRAL SPECIES 19 ENSGT00940000164325 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT01050000248409 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 Dog MODERN SPECIES 4 ENSCAFG00845014227 LYPD2 (ENSCAFG00845014195) #8 SLURP1 (ENSCAFG00845014172) #9 THEM6 (ENSCAFG00845014150) #10 PSCA (ENSCAFG00845014135) #11 JRK (ENSCAFG00845014123) #12 ARC (ENSCAFG00845014113) #13 ENSCAFG00845014062 #14 ADGRB1 (ENSCAFG00845013988) #15 ENSCAFG00845013724 MROH5 (ENSCAFG00845013367) #17 PTP4A3 (ENSCAFG00845013289) #18 GPR20 (ENSCAFG00845013261) #19 SLC45A4 (ENSCAFG00845013083) #20 DENND3 (ENSCAFG00845012933) #21 PTK2 (ENSCAFG00845012455) #22 AGO2 (ENSCAFG00845012184) #23 CHRAC1 (ENSCAFG00845012136) #24 TRAPPC9 (ENSCAFG00845011965) #25 KCNK9 (ENSCAFG00845011923) #26 COL22A1 (ENSCAFG00845011558) FAM135B (ENSCAFG00845011345) #28 ENSCAFG00845011290 KHDRBS3 (ENSCAFG00845011046) #29 ZFAT (ENSCAFG00845010442) #30 ST3GAL1 (ENSCAFG00845010238) #31 NDRG1 (ENSCAFG00845009769) #32 CCN4 (ENSCAFG00845009509) #33 SLA (ENSCAFG00845009256) #34 TG (ENSCAFG00845008772) #35 PHF20L1 (ENSCAFG00845008447) #36 Dingo MODERN SPECIES 88 SLURP1 (ENSCAFG00020018582) #9 THEM6 (ENSCAFG00020018579) #10 PSCA (ENSCAFG00020018574) #11 JRK (ENSCAFG00020018570) #12 ENSCAFG00020018567 ARC (ENSCAFG00020018566) #13 ENSCAFG00020018522 #14 ADGRB1 (ENSCAFG00020018429) #15 TSNARE1 (ENSCAFG00020018404) ENSCAFG00020018384 #17 PTP4A3 (ENSCAFG00020018367) #18 GPR20 (ENSCAFG00020018362) #19 SLC45A4 (ENSCAFG00020018358) #20 DENND3 (ENSCAFG00020018348) #21 ENSCAFG00020018346 PTK2 (ENSCAFG00020015459) #22 AGO2 (ENSCAFG00020014198) #23 CHRAC1 (ENSCAFG00020014129) #24 TRAPPC9 (ENSCAFG00020013664) #25 KCNK9 (ENSCAFG00020013626) #26 ENSCAFG00020013620 FAM135B (ENSCAFG00020013611) #28 ENSCAFG00020013598 KHDRBS3 (ENSCAFG00020013570) #29 ZFAT (ENSCAFG00020013483) #30 ENSCAFG00020013460 ST3GAL1 (ENSCAFG00020013456) #31 NDRG1 (ENSCAFG00020013455) #32 CCN4 (ENSCAFG00020013453) #33 SLA (ENSCAFG00020013450) #34 ENSCAFG00020013443 #35 Red fox MODERN SPECIES 202 SLURP1 (ENSVVUG00000013919) #9 THEM6 (ENSVVUG00000013927) #10 PSCA (ENSVVUG00000013929) #11 JRK (ENSVVUG00000013933) #12 ARC (ENSVVUG00000013938) #13 ENSVVUG00000013942 #14 ADGRB1 (ENSVVUG00000013982) #15 TSNARE1 (ENSVVUG00000014254) ENSVVUG00000014278 #17 ENSVVUG00000014293 #17 ENSVVUG00000014299 #18 ENSVVUG00000014301 #18 GPR20 (ENSVVUG00000014304) #19 SLC45A4 (ENSVVUG00000014310) #20 DENND3 (ENSVVUG00000014330) #21 PTK2 (ENSVVUG00000014682) #22 AGO2 (ENSVVUG00000014692) #23 CHRAC1 (ENSVVUG00000014699) #24 TRAPPC9 (ENSVVUG00000014706) #25 ENSVVUG00000014735 KCNK9 (ENSVVUG00000014739) #26 Caniformia_b ANCESTRAL SPECIES 22 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743.d #14 ENSGT01040000240949 ENSGT00940000163743.c #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Mustelinae ANCESTRAL SPECIES 68 ENSGT00940000162197.a #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743.d #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 American mink MODERN SPECIES 167 LYPD2 (ENSNVIG00000014802) #8 SLURP1 (ENSNVIG00000014827) #9 THEM6 (ENSNVIG00000014835) #10 PSCA (ENSNVIG00000014841) #11 JRK (ENSNVIG00000014858) #12 ARC (ENSNVIG00000014874) #13 ENSNVIG00000014885 #14 ADGRB1 (ENSNVIG00000015002) #15 TSNARE1 (ENSNVIG00000015082) ENSNVIG00000015129 #17 PTP4A3 (ENSNVIG00000015173) #18 GPR20 (ENSNVIG00000015219) #19 SLC45A4 (ENSNVIG00000015223) #20 ENSNVIG00000015230 #21 ENSNVIG00000015280 #21 PTK2 (ENSNVIG00000015342) #22 AGO2 (ENSNVIG00000015716) #23 ENSNVIG00000015772 #24 TRAPPC9 (ENSNVIG00000015793) #25 KCNK9 (ENSNVIG00000015902) #26 COL22A1 (ENSNVIG00000015932) FAM135B (ENSNVIG00000016203) #28 ENSNVIG00000016233 KHDRBS3 (ENSNVIG00000016244) #29 ZFAT (ENSNVIG00000016275) #30 ENSNVIG00000016549 Ferret MODERN SPECIES 172 ENSMPUG00000002087 #14 ENSMPUG00000002086 #14 ENSMPUG00000002084 ADGRB1 (ENSMPUG00000002001) #15 ENSMPUG00000001998 ENSMPUG00000019188 TSNARE1 (ENSMPUG00000001976) ENSMPUG00000001975 C8orf90 (ENSMPUG00000001972) #16 MROH5 (ENSMPUG00000001962) #17 PTP4A3 (ENSMPUG00000001950) #18 GPR20 (ENSMPUG00000019185) #19 ENSMPUG00000001947 SLC45A4 (ENSMPUG00000001946) #20 DENND3 (ENSMPUG00000001942) #21 PTK2 (ENSMPUG00000001936) #22 AGO2 (ENSMPUG00000001930) #23 ENSMPUG00000001929 ENSMPUG00000001926 #25 ENSMPUG00000001922 ENSMPUG00000001917 #25 ENSMPUG00000001914 KCNK9 (ENSMPUG00000001908) #26 COL22A1 (ENSMPUG00000001891) ENSMPUG00000001888 FAM135B (ENSMPUG00000001882) #28 KHDRBS3 (ENSMPUG00000001869) #29 ENSMPUG00000001868 ENSMPUG00000001866 ZFAT (ENSMPUG00000001862) #30 ENSMPUG00000019176 Ursidae ANCESTRAL SPECIES 26 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743.d #14 ENSGT01040000240949 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C.s #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215.f #36 ENSGT00390000011144 #37 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 16 ENSAMEG00000010004 MMRN2 (ENSAMEG00000009997) BMPR1A (ENSAMEG00000009972) LDB3 (ENSAMEG00000009941) OPN4 (ENSAMEG00000009912) ENSAMEG00000027199 ENSAMEG00000024384 WAPL (ENSAMEG00000009905) GRID1 (ENSAMEG00000009876) CCSER2 (ENSAMEG00000009866) RGR (ENSAMEG00000009851) LRIT1 (ENSAMEG00000009838) LRIT2 (ENSAMEG00000009834) CDHR1 (ENSAMEG00000009794) GPR15LG (ENSAMEG00000029953) ENSAMEG00000029479 #22 GHITM (ENSAMEG00000009753) NRG3 (ENSAMEG00000002812) ENSAMEG00000030329 ENSAMEG00000027737 SH2D4B (ENSAMEG00000012951) TSPAN14 (ENSAMEG00000013070) PRXL2A (ENSAMEG00000013059) DYDC2 (ENSAMEG00000013056) ENSAMEG00000013050 ENSAMEG00000013025 ENSAMEG00000026411 ENSAMEG00000013016 ENSAMEG00000013003 TMEM254 (ENSAMEG00000012986) PLAC9 (ENSAMEG00000012985) Giant Panda MODERN SPECIES 19 SLURP1 (ENSAMEG00000001401) #9 THEM6 (ENSAMEG00000031034) #10 PSCA (ENSAMEG00000001413) #11 JRK (ENSAMEG00000025092) #12 ARC (ENSAMEG00000001462) #13 ENSAMEG00000001467 #14 ENSAMEG00000027545 ENSAMEG00000001416 #15 ENSAMEG00000001499 ENSAMEG00000001529 #17 ENSAMEG00000028309 #17 PTP4A3 (ENSAMEG00000023758) #18 GPR20 (ENSAMEG00000025864) #19 SLC45A4 (ENSAMEG00000001563) #20 DENND3 (ENSAMEG00000001580) #21 PTK2 (ENSAMEG00000005104) #22 AGO2 (ENSAMEG00000005019) #23 CHRAC1 (ENSAMEG00000005017) #24 TRAPPC9 (ENSAMEG00000024149) #25 KCNK9 (ENSAMEG00000005009) #26 ENSAMEG00000006435 #27 FAM135B (ENSAMEG00000003012) #28 ENSAMEG00000025766 #29 ENSAMEG00000016750 #30 ENSAMEG00000012856 #34 TG (ENSAMEG00000012818) #35 PHF20L1 (ENSAMEG00000012878) #36 TMEM71 (ENSAMEG00000012906) #37 DNAAF11 (ENSAMEG00000012908) KCNQ3 (ENSAMEG00000012923) OC90 (ENSAMEG00000012980) Ursus ANCESTRAL SPECIES 217 ENSGT00730000111514 ENSGT00730000111571 #7 ENSGT00940000153378.a.a ##11 ENSGT00940000162197 #8 ENSGT00940000162933 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00450000040324.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C.s #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00390000006486 #25 Polar bear MODERN SPECIES 216 LY6D (ENSUMAG00000020419) LYNX1 (ENSUMAG00000020417) #7 ENSUMAG00000020407 ##11 LYPD2 (ENSUMAG00000020402) #8 SLURP1 (ENSUMAG00000020398) #9 PSCA (ENSUMAG00000020395) #11 JRK (ENSUMAG00000020393) #12 ENSUMAG00000020389 ENSUMAG00000020369 ENSUMAG00000020353 #17 PTP4A3 (ENSUMAG00000020350) #18 ENSUMAG00000020343 #20 DENND3 (ENSUMAG00000020261) #21 ENSUMAG00000020237 PTK2 (ENSUMAG00000020192) #22 AGO2 (ENSUMAG00000019572) #23 TRAPPC9 (ENSUMAG00000019186) #25 ENSUMAG00000019160 American black bear DUPLICATION American black bear DUPLICATION American black bear MODERN SPECIES 5487 ENSUAMG00000011999 #22 American black bear MODERN SPECIES 9207 ENSUAMG00000001195 #22 American black bear MODERN SPECIES 5033 PTK2 (ENSUAMG00000022672) #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155113.a.a #22 Common shrew MODERN SPECIES 5020 ENSSARG00000008468 #22 Hedgehog MODERN SPECIES 6452 PTK2 (ENSEEUG00000013097) #22 Atlantogenata ANCESTRAL SPECIES 106 ENSGT00570000080880 #16 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308.n.b ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215 #36 ENSGT00390000011144 #37 Xenarthra ANCESTRAL SPECIES 1288 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 Armadillo MODERN SPECIES 1038 GPR20 (ENSDNOG00000025432) #19 SLC45A4 (ENSDNOG00000014979) #20 ENSDNOG00000039123 DENND3 (ENSDNOG00000000994) #21 PTK2 (ENSDNOG00000017110) #22 Sloth MODERN SPECIES 5744 PTK2 (ENSCHOG00000010980) #22 Afrotheria ANCESTRAL SPECIES 10 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215 #36 ENSGT00390000011144 #37 ENSGT00940000158506 Tenrec MODERN SPECIES 6270 ENSETEG00000018006 #22 Afrotheria_a ANCESTRAL SPECIES 10 ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000164160 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215 #36 ENSGT00390000011144 #37 Hyrax MODERN SPECIES 5283 PTK2 (ENSPCAG00000017055) #22 Elephant MODERN SPECIES 567 ENSLAFG00000026802 #17 PTP4A3 (ENSLAFG00000006213) #18 GPR20 (ENSLAFG00000025908) #19 SLC45A4 (ENSLAFG00000010099) #20 DENND3 (ENSLAFG00000015654) #21 PTK2 (ENSLAFG00000007270) #22 AGO2 (ENSLAFG00000012905) #23 CHRAC1 (ENSLAFG00000001188) #24 TRAPPC9 (ENSLAFG00000001660) #25 KCNK9 (ENSLAFG00000008503) #26 ENSLAFG00000009277 FAM135B (ENSLAFG00000004228) #28 KHDRBS3 (ENSLAFG00000004849) #29 ZFAT (ENSLAFG00000010205) #30 ST3GAL1 (ENSLAFG00000029095) #31 NDRG1 (ENSLAFG00000002836) #32 CCN4 (ENSLAFG00000002835) #33 SLA (ENSLAFG00000013718) #34 TG (ENSLAFG00000012474) #35 PHF20L1 (ENSLAFG00000006105) #36 TMEM71 (ENSLAFG00000009515) #37 Marsupialia ANCESTRAL SPECIES 1 ENSGT00940000162197 #8 ENSGT01030000235263.a ENSGT00940000162933 #9 ENSGT00390000004859 #10 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00450000040324.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000156079 #28 ENSGT00940000154143.f.d ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215 #36 ENSGT00390000011144 #37 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT01030000235263.a ENSGT00390000004859 #10 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00450000040324.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000156079 #28 ENSGT00940000154143.f.d ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159300 #35 ENSGT00940000159104 #34 ENSGT00940000156215 #36 ENSGT00390000011144 #37 Diprotodontia ANCESTRAL SPECIES 51 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT01030000235263.a ENSGT00390000004859 #10 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00450000040324.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000156079 #28 ENSGT00940000154143.f.d Diprotodontia_a ANCESTRAL SPECIES 48 ENSGT00730000111571 #7 ENSGT00940000162197 #8 ENSGT01030000235263.a ENSGT00390000004859 #10 ENSGT00940000162277 #12 ENSGT00390000003914 #13 ENSGT00940000163743 #14 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00450000040324.a ENSGT00940000160938 #17 ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000156079 #28 ENSGT00940000154143.f.d Common wonbat DUPLICATION Common wonbat DUPLICATION Common wonbat MODERN SPECIES 307 ENSVURG00010018512 LYNX1 (ENSVURG00010018518) #7 LYPD2 (ENSVURG00010018521) #8 THEM6 (ENSVURG00010018524) #10 ENSVURG00010018528 ARC (ENSVURG00010018531) #13 ADGRB1 (ENSVURG00010018560) #15 ENSVURG00010018798 ENSVURG00010018807 #17 PTP4A3 (ENSVURG00010018814) #18 GPR20 (ENSVURG00010018852) #19 SLC45A4 (ENSVURG00010018857) #20 DENND3 (ENSVURG00010018871) #21 ENSVURG00010018898 #22 ENSVURG00010018902 #22 ENSVURG00010018910 #22 AGO2 (ENSVURG00010018916) #23 CHRAC1 (ENSVURG00010018927) #24 TRAPPC9 (ENSVURG00010018932) #25 ENSVURG00010018939 ENSVURG00010018941 KCNK9 (ENSVURG00010018946) #26 ENSVURG00010018961 #28 ENSVURG00010018966 #28 ENSVURG00010018974 ENSVURG00010018978 Common wonbat MODERN SPECIES 307 ENSVURG00010018368 ENSVURG00010018503 ENSVURG00010018512 LYNX1 (ENSVURG00010018518) #7 LYPD2 (ENSVURG00010018521) #8 THEM6 (ENSVURG00010018524) #10 ENSVURG00010018528 ARC (ENSVURG00010018531) #13 ADGRB1 (ENSVURG00010018560) #15 ENSVURG00010018798 ENSVURG00010018807 #17 PTP4A3 (ENSVURG00010018814) #18 GPR20 (ENSVURG00010018852) #19 SLC45A4 (ENSVURG00010018857) #20 DENND3 (ENSVURG00010018871) #21 ENSVURG00010018898 #22 ENSVURG00010018902 #22 ENSVURG00010018910 #22 AGO2 (ENSVURG00010018916) #23 CHRAC1 (ENSVURG00010018927) #24 TRAPPC9 (ENSVURG00010018932) #25 ENSVURG00010018939 ENSVURG00010018941 KCNK9 (ENSVURG00010018946) #26 ENSVURG00010018961 #28 ENSVURG00010018966 #28 ENSVURG00010018974 ENSVURG00010018978 Common wonbat MODERN SPECIES 307 ENSVURG00010018503 ENSVURG00010018512 LYNX1 (ENSVURG00010018518) #7 LYPD2 (ENSVURG00010018521) #8 THEM6 (ENSVURG00010018524) #10 ENSVURG00010018528 ARC (ENSVURG00010018531) #13 ADGRB1 (ENSVURG00010018560) #15 ENSVURG00010018798 ENSVURG00010018807 #17 PTP4A3 (ENSVURG00010018814) #18 GPR20 (ENSVURG00010018852) #19 SLC45A4 (ENSVURG00010018857) #20 DENND3 (ENSVURG00010018871) #21 ENSVURG00010018898 #22 ENSVURG00010018902 #22 ENSVURG00010018910 #22 AGO2 (ENSVURG00010018916) #23 CHRAC1 (ENSVURG00010018927) #24 TRAPPC9 (ENSVURG00010018932) #25 ENSVURG00010018939 ENSVURG00010018941 KCNK9 (ENSVURG00010018946) #26 ENSVURG00010018961 #28 ENSVURG00010018966 #28 ENSVURG00010018974 ENSVURG00010018978 koala MODERN SPECIES 170 SLC45A4 (ENSPCIG00000000685) #20 DENND3 (ENSPCIG00000027056) #21 PTK2 (ENSPCIG00000026517) #22 AGO2 (ENSPCIG00000026513) #23 CHRAC1 (ENSPCIG00000026511) #24 TRAPPC9 (ENSPCIG00000026318) #25 KCNK9 (ENSPCIG00000006474) #26 FAM135B (ENSPCIG00000011634) #28 Wallaby MODERN SPECIES 7785 ENSMEUG00000003208 #22 Tasmanian devil MODERN SPECIES ENSSHAG00000017767 ENSSHAG00000031009 #10 JRK (ENSSHAG00000027142) #12 ENSSHAG00000031776 ARC (ENSSHAG00000025802) #13 ENSSHAG00000017159 #14 ADGRB1 (ENSSHAG00000016588) #15 ENSSHAG00000025089 ENSSHAG00000010892 ENSSHAG00000002205 ENSSHAG00000016640 #17 PTP4A3 (ENSSHAG00000022131) #18 GPR20 (ENSSHAG00000020490) #19 SLC45A4 (ENSSHAG00000014716) #20 DENND3 (ENSSHAG00000014190) #21 PTK2 (ENSSHAG00000011092) #22 AGO2 (ENSSHAG00000009593) #23 ENSSHAG00000025232 ENSSHAG00000005176 #25 ENSSHAG00000025364 #26 ENSSHAG00000024591 ENSSHAG00000002738 ENSSHAG00000018716 #28 ENSSHAG00000029089 ENSSHAG00000000383 ENSSHAG00000032083 #29 ZFAT (ENSSHAG00000018373) #30 ST3GAL1 (ENSSHAG00000029982) #31 NDRG1 (ENSSHAG00000024700) #32 CCN4 (ENSSHAG00000015115) #33 SLA (ENSSHAG00000021012) #34 Opossum DUPLICATION Opossum MODERN SPECIES 2 ENSMODG00000039273 ENSMODG00000024365 #9 THEM6 (ENSMODG00000000042) #10 JRK (ENSMODG00000024367) #12 ARC (ENSMODG00000000033) #13 ENSMODG00000000048 #14 ADGRB1 (ENSMODG00000000556) #15 ENSMODG00000029552 ENSMODG00000049316 ENSMODG00000000627 #17 PTP4A3 (ENSMODG00000000651) #18 GPR20 (ENSMODG00000024396) #19 ENSMODG00000024398 SLC45A4 (ENSMODG00000000663) #20 ENSMODG00000042019 #21 ENSMODG00000049323 #22 ENSMODG00000038709 ENSMODG00000000707 #22 AGO2 (ENSMODG00000000748) #23 CHRAC1 (ENSMODG00000044477) #24 TRAPPC9 (ENSMODG00000024422) #25 ENSMODG00000024423 KCNK9 (ENSMODG00000000764) #26 ENSMODG00000000768 FAM135B (ENSMODG00000000885) #28 ENSMODG00000000893 ENSMODG00000048341 ENSMODG00000040118 ENSMODG00000041754 KHDRBS3 (ENSMODG00000000975) #29 ENSMODG00000001054 Opossum MODERN SPECIES 2 THEM6 (ENSMODG00000000042) #10 JRK (ENSMODG00000024367) #12 ARC (ENSMODG00000000033) #13 ENSMODG00000000048 #14 ADGRB1 (ENSMODG00000000556) #15 ENSMODG00000029552 ENSMODG00000049316 ENSMODG00000000627 #17 PTP4A3 (ENSMODG00000000651) #18 GPR20 (ENSMODG00000024396) #19 ENSMODG00000024398 SLC45A4 (ENSMODG00000000663) #20 ENSMODG00000042019 #21 ENSMODG00000049323 #22 ENSMODG00000038709 ENSMODG00000000707 #22 AGO2 (ENSMODG00000000748) #23 CHRAC1 (ENSMODG00000044477) #24 TRAPPC9 (ENSMODG00000024422) #25 ENSMODG00000024423 KCNK9 (ENSMODG00000000764) #26 ENSMODG00000000768 FAM135B (ENSMODG00000000885) #28 ENSMODG00000000893 ENSMODG00000048341 ENSMODG00000040118 ENSMODG00000041754 KHDRBS3 (ENSMODG00000000975) #29 ENSMODG00000001054 ZFAT (ENSMODG00000001068) #30 ENSMODG00000047814 Platypus MODERN SPECIES 15 ENSOANG00000006709 #17 PTP4A3 (ENSOANG00000029465) #18 GPR20 (ENSOANG00000009762) #19 SLC45A4 (ENSOANG00000009761) #20 DENND3 (ENSOANG00000007128) #21 PTK2 (ENSOANG00000007126) #22 AGO2 (ENSOANG00000007125) #23 ENSOANG00000041698 #24 TRAPPC9 (ENSOANG00000007122) #25 KCNK9 (ENSOANG00000007121) #26 FAM135B (ENSOANG00000014070) #28 KHDRBS3 (ENSOANG00000014074) #29 LYPD2 (ENSOANG00000014075) #8 ENSOANG00000014076 #8 ENSOANG00000042432 #11 RPLP1 (ENSOANG00000037964) ENSOANG00000037081 ARC (ENSOANG00000014077) #13 ENSOANG00000014078 #14 ADGRB1 (ENSOANG00000014079) #15 ENSOANG00000020239 Sauria ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT00390000004859.i #10 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Lepidosauria ANCESTRAL SPECIES 2 ENSGT00940000153378.b.a.a.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT00390000004859.i #10 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000177637 ENSGT00940000156215 #36 ENSGT00390000011144 #37 tuatara DUPLICATION tuatara DUPLICATION tuatara MODERN SPECIES 1282 ENSSPUG00000006125 LYPD2 (ENSSPUG00000006133) #8 ARC (ENSSPUG00000006157) #13 ADGRB1 (ENSSPUG00000006166) #15 ENSSPUG00000006206 TSNARE1 (ENSSPUG00000006223) PTP4A3 (ENSSPUG00000006297) #18 ENSSPUG00000006342 GPR20 (ENSSPUG00000006445) #19 ENSSPUG00000006481 #21 ENSSPUG00000006488 #21 ENSSPUG00000006498 #21 ENSSPUG00000006505 #21 ENSSPUG00000006515 #22 ENSSPUG00000006531 #22 ENSSPUG00000006566 #22 RPLP1 (ENSSPUG00000006575) AGO2 (ENSSPUG00000006608) #23 CHRAC1 (ENSSPUG00000006637) #24 TRAPPC9 (ENSSPUG00000006667) #25 KCNK9 (ENSSPUG00000006785) #26 tuatara MODERN SPECIES 1282 LY6E (ENSSPUG00000006104) ##11 ENSSPUG00000006118 ENSSPUG00000006125 LYPD2 (ENSSPUG00000006133) #8 ARC (ENSSPUG00000006157) #13 ADGRB1 (ENSSPUG00000006166) #15 ENSSPUG00000006206 TSNARE1 (ENSSPUG00000006223) PTP4A3 (ENSSPUG00000006297) #18 ENSSPUG00000006342 GPR20 (ENSSPUG00000006445) #19 ENSSPUG00000006481 #21 ENSSPUG00000006488 #21 ENSSPUG00000006498 #21 ENSSPUG00000006505 #21 ENSSPUG00000006515 #22 ENSSPUG00000006531 #22 ENSSPUG00000006566 #22 RPLP1 (ENSSPUG00000006575) AGO2 (ENSSPUG00000006608) #23 CHRAC1 (ENSSPUG00000006637) #24 TRAPPC9 (ENSSPUG00000006667) #25 KCNK9 (ENSSPUG00000006785) #26 tuatara MODERN SPECIES 1282 ENSSPUG00000006118 ENSSPUG00000006125 LYPD2 (ENSSPUG00000006133) #8 ARC (ENSSPUG00000006157) #13 ADGRB1 (ENSSPUG00000006166) #15 ENSSPUG00000006206 TSNARE1 (ENSSPUG00000006223) PTP4A3 (ENSSPUG00000006297) #18 ENSSPUG00000006342 GPR20 (ENSSPUG00000006445) #19 ENSSPUG00000006481 #21 ENSSPUG00000006488 #21 ENSSPUG00000006498 #21 ENSSPUG00000006505 #21 ENSSPUG00000006515 #22 ENSSPUG00000006531 #22 ENSSPUG00000006566 #22 RPLP1 (ENSSPUG00000006575) AGO2 (ENSSPUG00000006608) #23 CHRAC1 (ENSSPUG00000006637) #24 TRAPPC9 (ENSSPUG00000006667) #25 KCNK9 (ENSSPUG00000006785) #26 Episquamata ANCESTRAL SPECIES 1 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT00390000004859.i #10 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00910000144338 ENSGT00960000190025 ENSGT00940000156079.q #28 ENSGT00940000156079.r #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 Laterata ANCESTRAL SPECIES 5 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT01030000235263 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00910000144338 ENSGT00960000190025 ENSGT00940000156079.q #28 ENSGT00940000156079.r #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 Common wall lizard MODERN SPECIES 15 THEM6 (ENSPMRG00000005690) #10 ENSPMRG00000005697 ENSPMRG00000005706 ##11 PSCA (ENSPMRG00000005711) #11 ARC (ENSPMRG00000005718) #13 ENSPMRG00000005723 ADGRB1 (ENSPMRG00000005731) #15 ENSPMRG00000005753 TSNARE1 (ENSPMRG00000005772) ENSPMRG00000005802 ENSPMRG00000005806 PTP4A3 (ENSPMRG00000005814) #18 GPR20 (ENSPMRG00000005822) #19 SLC45A4 (ENSPMRG00000005828) #20 DENND3 (ENSPMRG00000005841) #21 PTK2 (ENSPMRG00000005866) #22 RPLP1 (ENSPMRG00000005922) AGO2 (ENSPMRG00000006138) #23 CHRAC1 (ENSPMRG00000006780) #24 TRAPPC9 (ENSPMRG00000006837) #25 ENSPMRG00000007004 #26 KCNK9 (ENSPMRG00000007010) #26 ENSPMRG00000007018 ENSPMRG00000007028 ENSPMRG00000007037 ENSPMRG00000007043 ENSPMRG00000007047 ENSPMRG00000007051 ENSPMRG00000007057 ENSPMRG00000007063 ENSPMRG00000007068 Argentine black and white tegu MODERN SPECIES 13 ENSSMRG00000008144 ##11 ENSSMRG00000008140 ##11 ENSSMRG00000008134 LYPD2 (ENSSMRG00000008128) #8 ENSSMRG00000008125 ENSSMRG00000008123 ENSSMRG00000008106 ARC (ENSSMRG00000008099) #13 ADGRB1 (ENSSMRG00000008078) #15 ENSSMRG00000008023 TSNARE1 (ENSSMRG00000007976) ENSSMRG00000007961 #18 GPR20 (ENSSMRG00000007950) #19 SLC45A4 (ENSSMRG00000007941) #20 DENND3 (ENSSMRG00000007932) #21 PTK2 (ENSSMRG00000007865) #22 RPLP1 (ENSSMRG00000007764) AGO2 (ENSSMRG00000007763) #23 CHRAC1 (ENSSMRG00000007762) #24 TRAPPC9 (ENSSMRG00000006918) #25 KCNK9 (ENSSMRG00000006889) #26 CATSPER2 (ENSSMRG00000006879) ENSSMRG00000006873 ENSSMRG00000006867 ENSSMRG00000006864 ENSSMRG00000006857 ENSSMRG00000006850 ENSSMRG00000006844 ENSSMRG00000006843 ENSSMRG00000006833 ENSSMRG00000006828 Toxicofera ANCESTRAL SPECIES 8 ENSGT01010000227788 ENSGT00990000205443 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT00390000004859.i #10 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00910000144338 ENSGT00940000163557.C ENSGT00940000156079.q #28 ENSGT00940000156079.r #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 Lizard MODERN SPECIES 3 RRM2B (ENSACAG00000008913) NCALD (ENSACAG00000042404) ENSACAG00000038144 ENSACAG00000043335 ENSACAG00000008759 ENSACAG00000036322 ENSACAG00000036602 ZNF706 (ENSACAG00000008753) YWHAZ (ENSACAG00000040316) ENSACAG00000039635 ENSACAG00000028249 ENSACAG00000000749 #18 GPR20 (ENSACAG00000000748) #19 SLC45A4 (ENSACAG00000000653) #20 DENND3 (ENSACAG00000000549) #21 PTK2 (ENSACAG00000000203) #22 ENSACAG00000000197 AGO2 (ENSACAG00000000167) #23 CHRAC1 (ENSACAG00000000166) #24 TRAPPC9 (ENSACAG00000000144) #25 ENSACAG00000041405 KCNK9 (ENSACAG00000000140) #26 ENSACAG00000000139 ENSACAG00000041194 ENSACAG00000040597 ENSACAG00000027706 ENSACAG00000024154 ENSACAG00000020938 ENSACAG00000045179 ENSACAG00000035367 ENSACAG00000022451 Elapidae ANCESTRAL SPECIES 32 ENSGT00940000153378.b.a.a.b ##11 ENSGT01010000227788 ENSGT00990000205443 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT00390000004859.j #10 ENSGT00390000004859.i #10 ENSGT01030000237813 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00910000144338 Indian cobra MODERN SPECIES 2 ENSNNAG00000009146 ENSNNAG00000009134 ##11 ENSNNAG00000009111 ENSNNAG00000009101 #10 THEM6 (ENSNNAG00000009092) #10 ENSNNAG00000009081 ENSNNAG00000009048 ARC (ENSNNAG00000009036) #13 ADGRB1 (ENSNNAG00000008806) #15 TSNARE1 (ENSNNAG00000008754) ENSNNAG00000008731 ENSNNAG00000008719 ENSNNAG00000008699 PTP4A3 (ENSNNAG00000008666) #18 DENND3 (ENSNNAG00000008602) #21 PTK2 (ENSNNAG00000008291) #22 RPLP1 (ENSNNAG00000008238) AGO2 (ENSNNAG00000008166) #23 CHRAC1 (ENSNNAG00000008151) #24 TRAPPC9 (ENSNNAG00000007932) #25 KCNK9 (ENSNNAG00000007909) #26 CATSPER2 (ENSNNAG00000007890) ENSNNAG00000007870 ENSNNAG00000007846 ENSNNAG00000007818 ENSNNAG00000007795 ENSNNAG00000007748 ENSNNAG00000007720 ENSNNAG00000007702 ENSNNAG00000007637 ENSNNAG00000007599 Elapidae_a DUPLICATION Elapidae_a DUPLICATION Elapidae_a ANCESTRAL SPECIES 103 ENSGT00990000205443.a ENSGT00940000153378.b.a.b ##11 ENSGT01030000235263 ENSGT00390000004859.j #10 ENSGT00390000004859.i #10 ENSGT00940000162197 #8 ENSGT01030000237813 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a.xb #22 ENSGT00940000155113.a.a.wb.a #22 ENSGT00550000074698.j.a ENSGT00940000155239.l #23 ENSGT00940000166127 ENSGT00940000155239.k #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000155113.a.a.wb.a #22 Mainland tiger snake MODERN SPECIES 2380 ENSNSUG00000000542 #22 Blue-lipped sea krait MODERN SPECIES 2638 ENSLLTG00000000838 #22 ENSLLTG00000000847 ENSLLTG00000000921 #23 Elapidae_a ANCESTRAL SPECIES ENSGT00940000155113.a.a.wb.b #22 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000155113.a.a.wb.b #22 Mainland tiger snake MODERN SPECIES 2919 ENSNSUG00000000528 #22 Elapidae_a ANCESTRAL SPECIES 103 ENSGT01010000227788 ENSGT00990000205443.a ENSGT00940000153378.b.a.b ##11 ENSGT01030000235263 ENSGT00390000004859.j #10 ENSGT00390000004859.i #10 ENSGT00940000162197 #8 ENSGT01030000237813 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a.xb #22 ENSGT00940000155113.a.a.wb.a #22 ENSGT00550000074698.j.a ENSGT00940000155239.l #23 ENSGT00940000166127 ENSGT00940000155239.k #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 Blue-lipped sea krait MODERN SPECIES 3004 PTK2 (ENSLLTG00000009486) #22 Acanthophiinae ANCESTRAL SPECIES 104 ENSGT00940000153378.b.a.a.b ##11 ENSGT01010000227788 ENSGT00990000205443.a ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT00390000004859.j #10 ENSGT00390000004859.i #10 ENSGT01030000237813 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a.xb #22 ENSGT00940000155239.k #23 ENSGT00550000074698.j.a ENSGT00940000155239.l #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 Mainland tiger snake MODERN SPECIES 205 SLC45A4 (ENSNSUG00000017032) #20 DENND3 (ENSNSUG00000017033) #21 PTK2 (ENSNSUG00000017034) #22 AGO2 (ENSNSUG00000017954) #23 CHRAC1 (ENSNSUG00000017956) #24 TRAPPC9 (ENSNSUG00000017957) #25 KCNK9 (ENSNSUG00000017958) #26 ENSNSUG00000017959 Eastern brown snake MODERN SPECIES 81 ENSPTXG00000018601 ENSPTXG00000018600 ENSPTXG00000018599 ##11 LYPD2 (ENSPTXG00000018598) #8 ENSPTXG00000018597 #10 THEM6 (ENSPTXG00000018596) #10 ENSPTXG00000018595 #8 ENSPTXG00000018594 ARC (ENSPTXG00000018593) #13 ADGRB1 (ENSPTXG00000018592) #15 TSNARE1 (ENSPTXG00000018591) PTP4A3 (ENSPTXG00000018590) #18 GPR20 (ENSPTXG00000018589) #19 SLC45A4 (ENSPTXG00000018588) #20 DENND3 (ENSPTXG00000018587) #21 PTK2 (ENSPTXG00000015722) #22 RPLP1 (ENSPTXG00000015712) AGO2 (ENSPTXG00000015330) #23 CHRAC1 (ENSPTXG00000015311) #24 TRAPPC9 (ENSPTXG00000015308) #25 ENSPTXG00000015307 #26 KCNK9 (ENSPTXG00000015306) #26 ENSPTXG00000015304 Archelosauria ANCESTRAL SPECIES 5 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT00390000004859.i #10 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Archosauria ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT01030000235263 ENSGT01030000239707 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000163129 #27 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 Australian saltwater crocodile MODERN SPECIES ENSCPRG00005013687 ##11 ENSCPRG00005013686 ##11 LYPD2 (ENSCPRG00005013683) #8 ENSCPRG00005013680 #8 ENSCPRG00005013678 ARC (ENSCPRG00005013663) #13 ENSCPRG00005013651 ADGRB1 (ENSCPRG00005013599) #15 ENSCPRG00005013580 TSNARE1 (ENSCPRG00005013571) PTP4A3 (ENSCPRG00005013540) #18 ENSCPRG00005013526 GPR20 (ENSCPRG00005013511) #19 SLC45A4 (ENSCPRG00005013508) #20 DENND3 (ENSCPRG00005013464) #21 PTK2 (ENSCPRG00005012596) #22 RPLP1 (ENSCPRG00005012385) AGO2 (ENSCPRG00005012306) #23 CHRAC1 (ENSCPRG00005012301) #24 TRAPPC9 (ENSCPRG00005012204) #25 KCNK9 (ENSCPRG00005012110) #26 ENSCPRG00005012044 ENSCPRG00005012012 ENSCPRG00005011978 #28 ENSCPRG00005011945 #28 KHDRBS3 (ENSCPRG00005011881) #29 ZFAT (ENSCPRG00005011739) #30 ST3GAL1 (ENSCPRG00005011684) #31 NDRG1 (ENSCPRG00005011585) #32 CCN4 (ENSCPRG00005011570) #33 SLA (ENSCPRG00005011507) #34 Aves ANCESTRAL SPECIES 9 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 African ostrich MODERN SPECIES 927 ZC3H12C (ENSSCUG00000017156) RDX (ENSSCUG00000017153) FDX1 (ENSSCUG00000017152) ARHGAP20 (ENSSCUG00000017151) RNF17 (ENSSCUG00000017147) CENPJ (ENSSCUG00000017145) PARP4 (ENSSCUG00000017144) MPHOSPH8 (ENSSCUG00000017142) TSNARE1 (ENSSCUG00000017136) PTP4A3 (ENSSCUG00000017130) #18 ENSSCUG00000017129 GPR20 (ENSSCUG00000017128) #19 SLC45A4 (ENSSCUG00000017124) #20 ENSSCUG00000017122 DENND3 (ENSSCUG00000017116) #21 PTK2 (ENSSCUG00000017108) #22 AGO2 (ENSSCUG00000017100) #23 CHRAC1 (ENSSCUG00000017099) #24 TRAPPC9 (ENSSCUG00000017096) #25 Neognathae ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000163916 ENSGT00940000163557.C ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 Galloanserae ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159300 #35 ENSGT00940000159104 #34 ENSGT00940000156215 #36 Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000162943 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000153378.a.a ##11 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C.d #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280.b #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 ENSGT00940000156215 #36 Japanese quail MODERN SPECIES 11 TOP1MT (ENSCJPG00005010481) ENSCJPG00005010480 ENSCJPG00005010479 ##11 ENSCJPG00005010478 ##11 ENSCJPG00005010477 ##11 ENSCJPG00005010476 ##11 ENSCJPG00005010475 PSCA (ENSCJPG00005010474) #11 ARC (ENSCJPG00005010469) #13 ADGRB1 (ENSCJPG00005010467) #15 TSNARE1 (ENSCJPG00005010465) PTP4A3 (ENSCJPG00005010458) #18 GPR20 (ENSCJPG00005010454) #19 SLC45A4 (ENSCJPG00005010453) #20 DENND3 (ENSCJPG00005010452) #21 PTK2 (ENSCJPG00005010449) #22 RPLP1 (ENSCJPG00005010448) AGO2 (ENSCJPG00005010107) #23 CHRAC1 (ENSCJPG00005010104) #24 TRAPPC9 (ENSCJPG00005010103) #25 KCNK9 (ENSCJPG00005010102) #26 ENSCJPG00005010100 #27 ENSCJPG00005010099 FAM135B (ENSCJPG00005010097) #28 KHDRBS3 (ENSCJPG00005010094) #29 ZFAT (ENSCJPG00005010092) #30 ST3GAL1 (ENSCJPG00005010090) #31 NDRG1 (ENSCJPG00005010088) #32 CCN4 (ENSCJPG00005010087) #33 SLA (ENSCJPG00005010086) #34 TG (ENSCJPG00005008340) #35 Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT01030000236209 ENSGT00940000153378.b.a.b ##11 ENSGT00940000153378.a.a ##11 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C.d #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00940000168748 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000156079 #28 ENSGT00940000157280.b #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159300 #35 ENSGT00940000159104 #34 ENSGT00940000156215 #36 ENSGT00390000011144 #37 Chicken MODERN SPECIES 11 TOP1MT (ENSGALG00010008081) ENSGALG00010008053 ENSGALG00010008048 ##11 LY6CLEL (ENSGALG00010008037) LY6E (ENSGALG00010008029) ##11 ENSGALG00010007947 ##11 ENSGALG00010007958 PSCA (ENSGALG00010007954) #11 ARC (ENSGALG00010007950) #13 ADGRB1 (ENSGALG00010008211) #15 TSNARE1 (ENSGALG00010008190) PTP4A3 (ENSGALG00010009335) #18 GPR20 (ENSGALG00010009320) #19 SLC45A4 (ENSGALG00010009253) #20 DENND3 (ENSGALG00010009237) #21 PTK2 (ENSGALG00010009159) #22 RPLP1 (ENSGALG00010009113) AGO2 (ENSGALG00010009068) #23 ENSGALG00010009035 TRAPPC9 (ENSGALG00010008999) #25 KCNK9 (ENSGALG00010008973) #26 COL22A1 (ENSGALG00010008946) #27 ENSGALG00010008894 FAM135B (ENSGALG00010008884) #28 KHDRBS3 (ENSGALG00010008852) #29 ZFAT (ENSGALG00010009345) #30 ST3GAL1 (ENSGALG00010009777) #31 NDRG1 (ENSGALG00010009749) #32 WISP1 (ENSGALG00010009736) #33 SLA (ENSGALG00010008176) #34 TG (ENSGALG00010008164) #35 Turkey DUPLICATION Turkey MODERN SPECIES 22 ENSMGAG00000012862 #32 ENSMGAG00000022370 ENSMGAG00000012876 #31 ENSMGAG00000018719 #30 ENSMGAG00000012883 #30 ENSMGAG00000022843 #29 ENSMGAG00000012888 #29 ENSMGAG00000012896 #28 ENSMGAG00000020709 ENSMGAG00000012923 #26 ENSMGAG00000018714 #26 ENSMGAG00000012927 #25 ENSMGAG00000012936 #24 ENSMGAG00000012952 #22 ENSMGAG00000012951 ENSMGAG00000020023 #22 ENSMGAG00000022269 ##22 ENSMGAG00000012942 #23 ENSMGAG00000019028 #21 ENSMGAG00000012966 #21 ENSMGAG00000012969 #20 ENSMGAG00000015881 #19 ENSMGAG00000012972 #18 ENSMGAG00000018853 ENSMGAG00000012979 ENSMGAG00000012984 #13 ENSMGAG00000021273 ENSMGAG00000012987 #11 ENSMGAG00000020757 ##11 ENSMGAG00000012990 ##11 ENSMGAG00000012991 Turkey MODERN SPECIES 22 ENSMGAG00000012853 #34 ENSMGAG00000012860 #33 ENSMGAG00000012862 #32 ENSMGAG00000022370 ENSMGAG00000012876 #31 ENSMGAG00000018719 #30 ENSMGAG00000012883 #30 ENSMGAG00000022843 #29 ENSMGAG00000012888 #29 ENSMGAG00000012896 #28 ENSMGAG00000020709 ENSMGAG00000012923 #26 ENSMGAG00000018714 #26 ENSMGAG00000012927 #25 ENSMGAG00000012936 #24 ENSMGAG00000012952 #22 ENSMGAG00000012951 ENSMGAG00000020023 #22 ENSMGAG00000022269 ##22 ENSMGAG00000012942 #23 ENSMGAG00000019028 #21 ENSMGAG00000012966 #21 ENSMGAG00000012969 #20 ENSMGAG00000015881 #19 ENSMGAG00000012972 #18 ENSMGAG00000018853 ENSMGAG00000012979 ENSMGAG00000012984 #13 ENSMGAG00000021273 ENSMGAG00000012987 #11 ENSMGAG00000020757 ##11 Anatidae ANCESTRAL SPECIES 3 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C.f #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163916 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159300 #35 ENSGT00940000159104 #34 ENSGT00940000156215 #36 Pink-footed goose MODERN SPECIES 37 ENSABRG00000009052 #21 PTK2 (ENSABRG00000009190) #22 RPLP1 (ENSABRG00000009791) AGO2 (ENSABRG00000009885) #23 CHRAC1 (ENSABRG00000010680) #24 TRAPPC9 (ENSABRG00000010691) #25 KCNK9 (ENSABRG00000010752) #26 ENSABRG00000010840 FAM135B (ENSABRG00000010869) #28 ENSABRG00000000837 KHDRBS3 (ENSABRG00000000861) #29 ZFAT (ENSABRG00000001043) #30 ENSABRG00000001218 ST3GAL1 (ENSABRG00000001315) #31 NDRG1 (ENSABRG00000001330) #32 CCN4 (ENSABRG00000001358) #33 TG (ENSABRG00000001382) #35 Duck DUPLICATION Duck MODERN SPECIES 87 ENSAPLG00000017872 #22 Duck MODERN SPECIES 10 ENSAPLG00000010200 ##11 ENSAPLG00000018242 ##11 ENSAPLG00000010175 ##11 ENSAPLG00000010171 ##11 LYPD2 (ENSAPLG00000029723) #8 ENSAPLG00000029154 PSCA (ENSAPLG00000029276) #11 ARC (ENSAPLG00000001892) #13 ADGRB1 (ENSAPLG00000009536) #15 ENSAPLG00000028784 TSNARE1 (ENSAPLG00000005699) ENSAPLG00000001675 GPR20 (ENSAPLG00000023130) #19 SLC45A4 (ENSAPLG00000014236) #20 ENSAPLG00000027705 #21 ENSAPLG00000011901 #22 RPLP1 (ENSAPLG00000023830) AGO2 (ENSAPLG00000010465) #23 CHRAC1 (ENSAPLG00000030772) #24 TRAPPC9 (ENSAPLG00000010275) #25 KCNK9 (ENSAPLG00000000939) #26 ENSAPLG00000001716 FAM135B (ENSAPLG00000010289) #28 KHDRBS3 (ENSAPLG00000014746) #29 ENSAPLG00000021102 ZFAT (ENSAPLG00000014922) #30 ST3GAL1 (ENSAPLG00000018128) #31 NDRG1 (ENSAPLG00000015644) #32 CCN4 (ENSAPLG00000002582) #33 ENSAPLG00000025021 #35 SLA (ENSAPLG00000003422) #34 Neognathae_b ANCESTRAL SPECIES 3 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000164558 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 Passeriformes ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000153378.a.a ##11 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000163129 #27 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 Great tit MODERN SPECIES 11 TOP1MT (ENSPMJG00000013178) ENSPMJG00000013177 ##11 ENSPMJG00000013175 ##11 ENSPMJG00000013172 ##11 ENSPMJG00000013171 ##11 ENSPMJG00000013169 ##11 ENSPMJG00000013167 PSCA (ENSPMJG00000013164) #11 ARC (ENSPMJG00000013161) #13 ADGRB1 (ENSPMJG00000013148) #15 TSNARE1 (ENSPMJG00000013139) PTP4A3 (ENSPMJG00000013132) #18 GPR20 (ENSPMJG00000013131) #19 SLC45A4 (ENSPMJG00000013130) #20 DENND3 (ENSPMJG00000013125) #21 PTK2 (ENSPMJG00000011788) #22 RPLP1 (ENSPMJG00000011787) AGO2 (ENSPMJG00000011786) #23 CHRAC1 (ENSPMJG00000011785) #24 TRAPPC9 (ENSPMJG00000011784) #25 KCNK9 (ENSPMJG00000011783) #26 ENSPMJG00000011782 #27 ENSPMJG00000011781 FAM135B (ENSPMJG00000011780) #28 KHDRBS3 (ENSPMJG00000011775) #29 ZFAT (ENSPMJG00000011770) #30 ST3GAL1 (ENSPMJG00000011765) #31 NDRG1 (ENSPMJG00000011763) #32 CCN4 (ENSPMJG00000011762) #33 SLA (ENSPMJG00000011761) #34 TG (ENSPMJG00000011760) #35 Passeriformes_d ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000153378.a.a ##11 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486.n #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000164558 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 Flycatcher MODERN SPECIES 11 ENSFALG00000009576 ##11 ENSFALG00000009581 ##11 ENSFALG00000027540 ##11 ENSFALG00000009599 ##11 ENSFALG00000009604 PSCA (ENSFALG00000009610) #11 ARC (ENSFALG00000015013) #13 ADGRB1 (ENSFALG00000009314) #15 ENSFALG00000029024 TSNARE1 (ENSFALG00000009283) ENSFALG00000026711 ENSFALG00000000673 #18 GPR20 (ENSFALG00000014503) #19 SLC45A4 (ENSFALG00000008784) #20 DENND3 (ENSFALG00000008780) #21 PTK2 (ENSFALG00000002857) #22 ENSFALG00000026431 AGO2 (ENSFALG00000002838) #23 CHRAC1 (ENSFALG00000026593) #24 TRAPPC9 (ENSFALG00000002813) #25 ENSFALG00000002806 #25 KCNK9 (ENSFALG00000027029) #26 ENSFALG00000014428 FAM135B (ENSFALG00000002758) #28 KHDRBS3 (ENSFALG00000002752) #29 ZFAT (ENSFALG00000002744) #30 ST3GAL1 (ENSFALG00000023420) #31 NDRG1 (ENSFALG00000002723) #32 CCN4 (ENSFALG00000002718) #33 SLA (ENSFALG00000023037) #34 TG (ENSFALG00000002680) #35 Passeriformes_g ANCESTRAL SPECIES 3 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT00940000153378.a.a ##11 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486.n #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000164558 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 Medium ground finch MODERN SPECIES 122 PTP4A3 (ENSGFOG00000006087) #18 GPR20 (ENSGFOG00000006091) #19 SLC45A4 (ENSGFOG00000006097) #20 DENND3 (ENSGFOG00000006118) #21 PTK2 (ENSGFOG00000006205) #22 AGO2 (ENSGFOG00000006341) #23 CHRAC1 (ENSGFOG00000006690) #24 TRAPPC9 (ENSGFOG00000006695) #25 ENSGFOG00000006710 #26 ENSGFOG00000006712 #26 Passeroidea ANCESTRAL SPECIES 2 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000153378.a.a ##11 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486.n #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000164558 ENSGT00940000163129 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 Zebra finch MODERN SPECIES 12 ENSTGUG00000018250 ENSTGUG00000012733 ##11 ENSTGUG00000012732 ##11 ENSTGUG00000028739 ENSTGUG00000022984 ##11 ENSTGUG00000021003 ##11 ENSTGUG00000012729 PSCA (ENSTGUG00000012728) #11 ARC (ENSTGUG00000012727) #13 ADGRB1 (ENSTGUG00000012707) #15 TSNARE1 (ENSTGUG00000012701) PTP4A3 (ENSTGUG00000021872) #18 GPR20 (ENSTGUG00000012699) #19 SLC45A4 (ENSTGUG00000012694) #20 DENND3 (ENSTGUG00000012690) #21 PTK2 (ENSTGUG00000012663) #22 RPLP1 (ENSTGUG00000012661) AGO2 (ENSTGUG00000012652) #23 CHRAC1 (ENSTGUG00000012651) #24 TRAPPC9 (ENSTGUG00000012639) #25 KCNK9 (ENSTGUG00000028788) #26 ENSTGUG00000029365 ENSTGUG00000012624 #27 FAM135B (ENSTGUG00000012621) #28 KHDRBS3 (ENSTGUG00000012611) #29 ZFAT (ENSTGUG00000012603) #30 ST3GAL1 (ENSTGUG00000012594) #31 NDRG1 (ENSTGUG00000012576) #32 CCN4 (ENSTGUG00000012573) #33 SLA (ENSTGUG00000012567) #34 TG (ENSTGUG00000012562) #35 Common canary DUPLICATION Common canary MODERN SPECIES 794 ENSSCAG00000002279 #22 Common canary MODERN SPECIES ARC (ENSSCAG00000009135) #13 ADGRB1 (ENSSCAG00000009035) #15 TSNARE1 (ENSSCAG00000008951) PTP4A3 (ENSSCAG00000008906) #18 GPR20 (ENSSCAG00000008884) #19 SLC45A4 (ENSSCAG00000008873) #20 DENND3 (ENSSCAG00000008864) #21 ENSSCAG00000008819 #22 RPLP1 (ENSSCAG00000008813) AGO2 (ENSSCAG00000008805) #23 CHRAC1 (ENSSCAG00000008786) #24 TRAPPC9 (ENSSCAG00000008702) #25 KCNK9 (ENSSCAG00000008607) #26 ENSSCAG00000008586 ENSSCAG00000008564 FAM135B (ENSSCAG00000008555) #28 ENSSCAG00000008508 KHDRBS3 (ENSSCAG00000008494) #29 ZFAT (ENSSCAG00000008486) #30 ST3GAL1 (ENSSCAG00000008475) #31 NDRG1 (ENSSCAG00000008471) #32 CCN4 (ENSSCAG00000008468) #33 SLA (ENSSCAG00000008460) #34 Neognathae_c ANCESTRAL SPECIES 1 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #8 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163557.C ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159300 #35 ENSGT00940000159104 #34 Kakapo MODERN SPECIES ENSSHBG00005001196 ##11 ENSSHBG00005001197 ##11 ENSSHBG00005001198 ENSSHBG00005001199 ##11 LYPD2 (ENSSHBG00005001200) #8 ENSSHBG00005001201 ENSSHBG00005001202 ARC (ENSSHBG00005001203) #13 ADGRB1 (ENSSHBG00005001204) #15 TSNARE1 (ENSSHBG00005001205) PTP4A3 (ENSSHBG00005001206) #18 GPR20 (ENSSHBG00005001207) #19 SLC45A4 (ENSSHBG00005001208) #20 ENSSHBG00005001209 #21 ENSSHBG00005001210 #21 PTK2 (ENSSHBG00005001211) #22 RPLP1 (ENSSHBG00005001212) AGO2 (ENSSHBG00005001213) #23 CHRAC1 (ENSSHBG00005001214) #24 TRAPPC9 (ENSSHBG00005001215) #25 KCNK9 (ENSSHBG00005001217) #26 ENSSHBG00005001220 ENSSHBG00005001221 FAM135B (ENSSHBG00005001222) #28 KHDRBS3 (ENSSHBG00005001223) #29 ZFAT (ENSSHBG00005001224) #30 ST3GAL1 (ENSSHBG00005001225) #31 NDRG1 (ENSSHBG00005001226) #32 CCN4 (ENSSHBG00005001227) #33 ENSSHBG00005000662 #35 SLA (ENSSHBG00005002333) #34 Golden eagle MODERN SPECIES 20 ENSACCG00020004135 ENSACCG00020004138 ##11 ENSACCG00020004145 ##11 ENSACCG00020004152 ##11 ENSACCG00020004161 ##11 LYPD2 (ENSACCG00020004168) #8 ENSACCG00020004179 PSCA (ENSACCG00020004190) #11 ARC (ENSACCG00020004195) #13 ADGRB1 (ENSACCG00020004228) #15 TSNARE1 (ENSACCG00020004263) PTP4A3 (ENSACCG00020004274) #18 GPR20 (ENSACCG00020004283) #19 SLC45A4 (ENSACCG00020004289) #20 DENND3 (ENSACCG00020004301) #21 PTK2 (ENSACCG00020004371) #22 RPLP1 (ENSACCG00020004407) AGO2 (ENSACCG00020004419) #23 CHRAC1 (ENSACCG00020004433) #24 TRAPPC9 (ENSACCG00020004452) #25 KCNK9 (ENSACCG00020004478) #26 ENSACCG00020004497 ENSACCG00020004510 ENSACCG00020004527 #28 ENSACCG00020000347 #28 KHDRBS3 (ENSACCG00020000376) #29 ZFAT (ENSACCG00020000410) #30 ST3GAL1 (ENSACCG00020000439) #31 NDRG1 (ENSACCG00020000456) #32 CCN4 (ENSACCG00020000483) #33 ENSACCG00020000530 #35 Cryptodira ANCESTRAL SPECIES 22 ENSGT00940000164676 ENSGT00940000161068 ENSGT00940000162747 ENSGT00940000153837.a.a ENSGT00940000162943 ENSGT00940000153378.b.b ##11 ENSGT01030000239707 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698.g ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Chinese turtle MODERN SPECIES 1134 SLC45A4 (ENSPSIG00000014137) #20 DENND3 (ENSPSIG00000014485) #21 ENSPSIG00000000769 PTK2 (ENSPSIG00000003846) #22 RPLP1 (ENSPSIG00000004041) AGO2 (ENSPSIG00000004064) #23 CHRAC1 (ENSPSIG00000004183) #24 ENSPSIG00000000776 TRAPPC9 (ENSPSIG00000004195) #25 KCNK9 (ENSPSIG00000004215) #26 ENSPSIG00000000779 ENSPSIG00000004222 #27 ENSPSIG00000000788 ENSPSIG00000004345 #28 ENSPSIG00000004351 #28 ENSPSIG00000000795 KHDRBS3 (ENSPSIG00000004366) #29 ZFAT (ENSPSIG00000004396) #30 ENSPSIG00000000801 Testudinoidea ANCESTRAL SPECIES 16 ENSGT00940000153378.b.a.a.a.a ##11 ENSGT00940000153378.b.a.a.a.b ##11 ENSGT00940000153378.b.a.b.a.a ##11 ENSGT00940000162197 #8 ENSGT00390000004859.i #10 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698.g ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Emydidae ANCESTRAL SPECIES 15 ENSGT00940000153378.b.a.a.a.b ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b.a.a ##11 ENSGT00940000162197 #8 ENSGT00390000004859.i #10 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698.g ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT00940000154725 #31 ENSGT00950000182872.f.a.b #32 ENSGT00940000158587 #33 ENSGT00940000159104 #34 ENSGT00940000159300 #35 Three-toed box turtle MODERN SPECIES 24 ENSTMTG00000000377 ##11 ENSTMTG00000000346 ##11 LYPD2 (ENSTMTG00000000322) #8 THEM6 (ENSTMTG00000000308) #10 ENSTMTG00000000295 ##11 ENSTMTG00000000282 ENSTMTG00000000262 ARC (ENSTMTG00000000252) #13 ADGRB1 (ENSTMTG00000000135) #15 TSNARE1 (ENSTMTG00000020237) PTP4A3 (ENSTMTG00000020227) #18 ENSTMTG00000020199 GPR20 (ENSTMTG00000020188) #19 SLC45A4 (ENSTMTG00000020178) #20 ENSTMTG00000020169 #21 PTK2 (ENSTMTG00000020097) #22 ENSTMTG00000020081 AGO2 (ENSTMTG00000019370) #23 CHRAC1 (ENSTMTG00000019319) #24 TRAPPC9 (ENSTMTG00000019269) #25 ENSTMTG00000019257 #26 KCNK9 (ENSTMTG00000019248) #26 ENSTMTG00000019228 ENSTMTG00000019203 ENSTMTG00000019149 #28 ENSTMTG00000019087 #28 KHDRBS3 (ENSTMTG00000019040) #29 ENSTMTG00000019019 ZFAT (ENSTMTG00000018733) #30 ST3GAL1 (ENSTMTG00000018689) #31 ENSTMTG00000018673 painted turtle MODERN SPECIES 2424 ENSCPBG00000019069 ENSCPBG00000019071 ##11 ENSCPBG00000019072 ##11 LYPD2 (ENSCPBG00000019073) #8 THEM6 (ENSCPBG00000019074) #10 ENSCPBG00000019075 ##11 PSCA (ENSCPBG00000019077) #11 ARC (ENSCPBG00000019078) #13 ADGRB1 (ENSCPBG00000019081) #15 TSNARE1 (ENSCPBG00000019095) PTP4A3 (ENSCPBG00000019106) #18 ENSCPBG00000019116 GPR20 (ENSCPBG00000019121) #19 SLC45A4 (ENSCPBG00000019127) #20 DENND3 (ENSCPBG00000019131) #21 PTK2 (ENSCPBG00000019149) #22 ENSCPBG00000019180 AGO2 (ENSCPBG00000019183) #23 CHRAC1 (ENSCPBG00000019186) #24 TRAPPC9 (ENSCPBG00000019213) #25 KCNK9 (ENSCPBG00000019611) #26 ENSCPBG00000019617 ENSCPBG00000019626 FAM135B (ENSCPBG00000019633) #28 KHDRBS3 (ENSCPBG00000019654) #29 ZFAT (ENSCPBG00000019667) #30 ST3GAL1 (ENSCPBG00000019674) #31 NDRG1 (ENSCPBG00000019688) #32 CCN4 (ENSCPBG00000019695) #33 ENSCPBG00000019699 #35 ENSCPBG00000019703 Testudinidae ANCESTRAL SPECIES 111 ENSGT00970000197866 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698.g ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 2238 ENSCABG00000000605 #22 ENSCABG00000000560 #22 ENSCABG00000000543 AGO2 (ENSCABG00000000467) #23 CHRAC1 (ENSCABG00000000454) #24 TRAPPC9 (ENSCABG00000000390) #25 Abingdon island giant tortoise MODERN SPECIES 2238 ENSCABG00000000605 #22 ENSCABG00000000560 #22 ENSCABG00000000543 AGO2 (ENSCABG00000000467) #23 CHRAC1 (ENSCABG00000000454) #24 TRAPPC9 (ENSCABG00000000390) #25 Goode s thornscrub tortoise MODERN SPECIES 156 ENSGEVG00005014486 ENSGEVG00005014447 GPR20 (ENSGEVG00005014409) #19 SLC45A4 (ENSGEVG00005014385) #20 DENND3 (ENSGEVG00005014317) #21 PTK2 (ENSGEVG00005014062) #22 ENSGEVG00005013974 AGO2 (ENSGEVG00005013907) #23 CHRAC1 (ENSGEVG00005013811) #24 TRAPPC9 (ENSGEVG00005013635) #25 Anura ANCESTRAL SPECIES 207 ENSGT00390000003914 #13 ENSGT00940000157432.C #15 ENSGT01000000214440.A.a.a ENSGT00940000159581 #18 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000164160 ENSGT00940000161019 ENSGT00940000156079 #28 Frog MODERN SPECIES 6 ENSXETG00000042809 arc (ENSXETG00000045973) #13 adgrb1 (ENSXETG00000019150) #15 tsnare1 (ENSXETG00000023632) ENSXETG00000045355 ENSXETG00000036147 ENSXETG00000045004 cox11 (ENSXETG00000023638) ptp4a3 (ENSXETG00000023744) #18 XB5813854 [provisional:ankrd52] (ENSXETG00000023747) gpr20 (ENSXETG00000023749) #19 slc45a4 (ENSXETG00000023750) #20 dennd3 (ENSXETG00000023753) #21 rplp1 (ENSXETG00000023754) ago2 (ENSXETG00000023755) #23 ptk2 (ENSXETG00000023764) #22 ENSXETG00000048310 chrac1 (ENSXETG00000007962) #24 trappc9 (ENSXETG00000023767) #25 kcnk9 (ENSXETG00000038355) #26 ENSXETG00000038065 ENSXETG00000043702 ENSXETG00000046422 fam135b (ENSXETG00000033168) #28 col22a1 (ENSXETG00000034204) ENSXETG00000019414 ENSXETG00000036977 ENSXETG00000042719 khdrbs3 (ENSXETG00000009227) #29 ENSXETG00000045544 zfat (ENSXETG00000020631) #30 Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000013000 ZFAT (ENSLLEG00000013029) #30 ENSLLEG00000013120 ENSLLEG00000013143 ENSLLEG00000013185 THEM6 (ENSLLEG00000013240) #10 ENSLLEG00000013258 ENSLLEG00000013302 ENSLLEG00000013383 GPR20 (ENSLLEG00000013406) #19 SLC45A4 (ENSLLEG00000013430) #20 ENSLLEG00000013531 ENSLLEG00000013555 ENSLLEG00000013580 DENND3 (ENSLLEG00000013633) #21 PTK2 (ENSLLEG00000013830) #22 ENSLLEG00000015343 AGO2 (ENSLLEG00000015411) #23 ENSLLEG00000015828 ENSLLEG00000015849 STK3 (ENSLLEG00000015996) OSR2 (ENSLLEG00000017230) VPS13B (ENSLLEG00000017351) ENSLLEG00000017840 ENSLLEG00000017948 RGS22 (ENSLLEG00000018029) FBXO43 (ENSLLEG00000018985) ENSLLEG00000019053 SPAG1 (ENSLLEG00000019184) ENSLLEG00000020293 RNF19A (ENSLLEG00000020333) Coelacanth MODERN SPECIES 1170 PTK2 (ENSLACG00000011204) #22 rplp1 (ENSLACG00000012630) Actinopterygii ANCESTRAL SPECIES 2 ENSGT00940000161897.b.a ENSGT00940000163790 ENSGT00390000016546 ENSGT00940000160387 ENSGT00940000156930 ENSGT00940000160042 ENSGT00940000154491.c ENSGT00950000183081.b.i.a ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000164558 ENSGT00940000163557.C ENSGT00940000159308 ENSGT00940000164076.a.b ENSGT00940000164160 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 ENSGT01060000248575.D.c.b.a.a Neopterygii ANCESTRAL SPECIES 34 ENSGT00940000161897.b.b ENSGT00940000163790 ENSGT00390000016546 ENSGT00940000160387 ENSGT00940000156930 ENSGT00940000160042 ENSGT00940000154491.c ENSGT00950000183081.b.i.a ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000166193 ENSGT01040000240444.B #19 ENSGT00950000182914.a.a.a #20 ENSGT00940000155784.C #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00980000199189 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 #27 ENSGT00940000164558 ENSGT00940000163557.C ENSGT00940000159308 ENSGT00940000164076.a.b ENSGT00940000164160 ENSGT00940000156079 #28 ENSGT00940000157280 #29 ENSGT00940000156658 #30 Spotted gar MODERN SPECIES 649 bop1 (ENSLOCG00000007429) SCX (ENSLOCG00000007444) ENSLOCG00000007454 hgh1 (ENSLOCG00000007462) ENSLOCG00000007478 ENSLOCG00000007509 ENSLOCG00000007544 scrt1b (ENSLOCG00000007573) zgc:63863 (ENSLOCG00000007587) dgat1a (ENSLOCG00000007601) cfap20 (ENSLOCG00000007614) ENSLOCG00000007644 GPR20 (ENSLOCG00000018334) #19 SLC45A4 (ENSLOCG00000007657) #20 DENND3 (ENSLOCG00000007668) #21 PTK2 (ENSLOCG00000007702) #22 rplp1 (ENSLOCG00000007729) ENSLOCG00000007752 ago2 (ENSLOCG00000007766) #23 chrac1 (ENSLOCG00000007800) TRAPPC9 (ENSLOCG00000007814) #25 SALL3 (ENSLOCG00000007831) atp9b (ENSLOCG00000007857) nfatc1 (ENSLOCG00000007875) smim13 (ENSLOCG00000007898) nedd9 (ENSLOCG00000007912) TMEM170B (ENSLOCG00000007926) ADTRP (ENSLOCG00000007936) HIVEP1 (ENSLOCG00000007963) edn1 (ENSLOCG00000007983) ENSLOCG00000007995 Osteoglossocephalai ANCESTRAL SPECIES 74 ENSGT00390000016546 ENSGT00940000160387 ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a ENSGT00940000160042 ENSGT00940000154491.c.b ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000166193 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b Clupeocephala ANCESTRAL SPECIES 562 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES 153 ENSGT00690000103873 ENSGT00940000156215 #36 ENSGT00940000159104.d #34 ENSGT00940000159300 #35 ENSGT00940000158587.c.a #33 ENSGT00950000182872.f.a.b.o #32 ENSGT00940000159581.b.a #18 ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.a ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #19 ENSGT00950000182914.a.a.a.c.a #20 ENSGT00940000155784.C.u.a #21 ENSGT00940000155113.a.a.a #22 ENSGT00980000199189 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00390000012412 ENSGT00940000157222.a ENSGT00390000018110 ENSGT00940000164478.b ENSGT00940000160520.f ENSGT00940000155471.d ENSGT00940000156541 ENSGT00940000155697.A.b ENSGT00390000003571.h ENSGT00390000001827 ENSGT00940000159099 ENSGT00390000012832 Clupeiformes ANCESTRAL SPECIES 198 ENSGT00940000159581.b.a #18 ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.a ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00940000154491.c.b ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #19 ENSGT00950000182914.a.a.a.c.a #20 ENSGT00940000155784.C.u.a #21 ENSGT00940000155113.a.a.a #22 ENSGT00980000199189 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00390000012412 ENSGT00940000157222.a ENSGT00390000018110 ENSGT00940000160520.f ENSGT00940000155471.d ENSGT00940000156541 ENSGT00940000155697.A.b ENSGT00390000003571.h ENSGT00390000001827 ENSGT00940000159099 ENSGT00390000012832 ENSGT00390000016277.a.k Atlantic herring MODERN SPECIES 2 TMEM67 (ENSCHAG00000001604) c4b (ENSCHAG00000002061) ENSCHAG00000003245 ENSCHAG00000003355 ENSCHAG00000003497 PTP4A3 (ENSCHAG00000003529) #18 csnk2a1 (ENSCHAG00000003578) ENSCHAG00000004070 SCX (ENSCHAG00000004196) MROH1 (ENSCHAG00000004383) scrt1b (ENSCHAG00000006982) dgat1b (ENSCHAG00000007020) GPR20 (ENSCHAG00000007678) #19 SLC45A4 (ENSCHAG00000007693) #20 DENND3 (ENSCHAG00000007743) #21 ptk2ab (ENSCHAG00000008679) #22 ENSCHAG00000015046 ENSCHAG00000015073 MRS2 (ENSCHAG00000015172) ENSCHAG00000015423 CPQ (ENSCHAG00000015473) ENSCHAG00000015503 cmtm8b (ENSCHAG00000015856) ctnnb1 (ENSCHAG00000015874) ULK4 (ENSCHAG00000016058) TRAK1 (ENSCHAG00000016326) ENSCHAG00000017565 ccka (ENSCHAG00000017599) cnot10 (ENSCHAG00000017640) trim71 (ENSCHAG00000018831) TCAIM (ENSCHAG00000018891) Denticle herring MODERN SPECIES 86 ENSDCDG00000027706 ptk2ab (ENSDCDG00000026011) #22 ENSDCDG00000025944 SLC45A4 (ENSDCDG00000025942) #20 dgat1b (ENSDCDG00000025658) ENSDCDG00000025632 Otophysi ANCESTRAL SPECIES 143 ENSGT00690000103873 ENSGT00940000156215 #36 ENSGT00940000159104.d #34 ENSGT00940000159300 #35 ENSGT00940000158587.c.a #33 ENSGT00950000182872.f.a.b.o #32 ENSGT00940000159581.b.a #18 ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.a ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #19 ENSGT00950000182914.a.a.a.c.a #20 ENSGT00940000155784.C.u.a #21 ENSGT00940000155113.a.a.a #22 ENSGT00390000000724.c.b.c ENSGT00940000156554.a ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000157244.a.b ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b ENSGT00940000167106 ENSGT00940000159463 ENSGT00950000182844.b.b.a ENSGT00940000161384 ENSGT00940000157343.a.b ENSGT00940000159724 ENSGT00530000063745.a Characiphysae ANCESTRAL SPECIES ENSGT00940000156215 #36 ENSGT00940000159300 #35 ENSGT00940000159104.d #34 ENSGT00940000158587.c.a #33 ENSGT00950000182872.f.a.b.o #32 ENSGT00940000159581.b.a #18 ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.a ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00940000154491.c.b ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #19 ENSGT00950000182914.a.a.a.c.a #20 ENSGT00940000155784.C.u.a #21 ENSGT00940000155113.a.a.a #22 ENSGT00390000000724.c.b.c ENSGT00940000156554.a ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000157244.a.b ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b ENSGT00940000167106 ENSGT00940000159463 ENSGT00950000182844.b.b.a ENSGT00940000161384 ENSGT00940000157343.a.b ENSGT00940000159724 ENSGT00530000063745.a Channel catfish MODERN SPECIES PHF20L1 (ENSIPUG00000004582) #36 tg (ENSIPUG00000004656) #35 SLA (ENSIPUG00000004701) #34 wisp1 (ENSIPUG00000004725) #33 ndrg1b (ENSIPUG00000004795) #32 ptp4a3 (ENSIPUG00000005240) #18 csnk2a1 (ENSIPUG00000005268) SCX (ENSIPUG00000005332) mroh1 (ENSIPUG00000005350) ENSIPUG00000005537 ENSIPUG00000005547 ENSIPUG00000005558 dgat1b (ENSIPUG00000005568) GPR20 (ENSIPUG00000005597) #19 SLC45A4 (ENSIPUG00000005611) #20 ptk2ab (ENSIPUG00000005669) #22 ldlrad4b (ENSIPUG00000006109) fam210ab (ENSIPUG00000006139) mc5rb (ENSIPUG00000006145) mc2r (ENSIPUG00000006159) lmna (ENSIPUG00000006185) pear1 (ENSIPUG00000006288) gpatch4 (ENSIPUG00000006348) nes (ENSIPUG00000006413) mef2d (ENSIPUG00000006444) rhbg (ENSIPUG00000006503) hapln2 (ENSIPUG00000006549) bcan (ENSIPUG00000006560) isg20l2 (ENSIPUG00000006645) Rrnad1 (ENSIPUG00000006657) s100a1 (ENSIPUG00000006680) Characiphysae_b ANCESTRAL SPECIES 2 ENSGT00940000156215 #36 ENSGT00940000159104.d #34 ENSGT00940000159300 #35 ENSGT00940000158587.c.a #33 ENSGT00950000182872.f.a.b.o #32 ENSGT00940000159581.b.a #18 ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.a ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00940000154491.c.b ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #19 ENSGT00950000182914.a.a.a.c.a #20 ENSGT00940000155784.C.u.a #21 ENSGT00940000155113.a.a.a #22 ENSGT00390000000724.c.b.c ENSGT00940000156554.a ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000157244.a.b ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b ENSGT00940000167106 ENSGT00940000159463 ENSGT00950000182844.b.b.a ENSGT00940000161384 ENSGT00940000157343.a.b ENSGT00940000159724 ENSGT00530000063745.a Characoidei ANCESTRAL SPECIES 7 ENSGT00940000154412.B.a ENSGT00940000156215 #36 ENSGT00940000159104.d #34 ENSGT00940000159300 #35 ENSGT00940000158587.c.a #33 ENSGT00950000182872.f.a.b.o #32 ENSGT00940000159581.b.a #18 ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.a ENSGT00940000156930 ENSGT00940000154491.c.b ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #19 ENSGT00950000182914.a.a.a.c.a #20 ENSGT00940000155784.C.u.a #21 ENSGT00940000155113.a.a.a #22 ENSGT00390000000724.c.b.c ENSGT00940000156554.a ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000157244.a.b ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b ENSGT00940000167106 ENSGT00940000159463 ENSGT00950000182844.b.b.a ENSGT00940000161384 ENSGT00940000157343.a.b ENSGT00940000159724 ENSGT00530000063745.a Red-bellied piranha MODERN SPECIES 210 ENSPNAG00000028907 PHF20L1 (ENSPNAG00000028885) #36 tg (ENSPNAG00000028815) #35 SLA (ENSPNAG00000028538) #34 ccn4b (ENSPNAG00000028530) #33 ndrg1b (ENSPNAG00000028515) #32 PTP4A3 (ENSPNAG00000028504) #18 csnk2a1 (ENSPNAG00000028488) SCX (ENSPNAG00000004359) ENSPNAG00000028407 SCRT1 (ENSPNAG00000027880) dgat1b (ENSPNAG00000027855) GPR20 (ENSPNAG00000006782) #19 SLC45A4 (ENSPNAG00000005476) #20 DENND3 (ENSPNAG00000027692) #21 ptk2ab (ENSPNAG00000027658) #22 Mexicana tetra MODERN SPECIES 1 ENSAMXG00000039010 ENSAMXG00000018473 #36 SLA (ENSAMXG00000036343) #34 tg (ENSAMXG00000018497) #35 ccn4b (ENSAMXG00000036329) #33 ndrg1b (ENSAMXG00000038707) #32 PTP4A3 (ENSAMXG00000041350) #18 csnk2a1 (ENSAMXG00000034564) SCX (ENSAMXG00000018584) ENSAMXG00000018592 SCRT1 (ENSAMXG00000042624) dgat1b (ENSAMXG00000037012) GPR20 (ENSAMXG00000031984) #19 SLC45A4 (ENSAMXG00000018626) #20 DENND3 (ENSAMXG00000018629) #21 ptk2ab (ENSAMXG00000018637) #22 ldlrad4b (ENSAMXG00000018643) fam210ab (ENSAMXG00000018649) mc5rb (ENSAMXG00000024935) mc2r (ENSAMXG00000025097) lmna (ENSAMXG00000018659) ENSAMXG00000018680 gpatch4 (ENSAMXG00000034049) ENSAMXG00000018698 nes (ENSAMXG00000018712) mef2d (ENSAMXG00000018717) rhbg (ENSAMXG00000018727) hapln2 (ENSAMXG00000037946) bcan (ENSAMXG00000018740) ENSAMXG00000034827 mettl25b (ENSAMXG00000018760) Electric eel MODERN SPECIES 39 ENSEEEG00000017206 ENSEEEG00000017207 SLA (ENSEEEG00000017210) #34 ENSEEEG00000017213 #35 ccn4b (ENSEEEG00000017214) #33 ndrg1b (ENSEEEG00000017216) #32 PTP4A3 (ENSEEEG00000017232) #18 csnk2a1 (ENSEEEG00000017246) SCX (ENSEEEG00000017312) ENSEEEG00000017328 scrt1b (ENSEEEG00000017828) dgat1b (ENSEEEG00000017831) GPR20 (ENSEEEG00000017833) #19 SLC45A4 (ENSEEEG00000017834) #20 DENND3 (ENSEEEG00000017835) #21 ptk2ab (ENSEEEG00000017854) #22 ldlrad4b (ENSEEEG00000018125) fam210ab (ENSEEEG00000018128) mc5rb (ENSEEEG00000018130) mc2r (ENSEEEG00000018131) lmna (ENSEEEG00000018134) ENSEEEG00000018143 Cyprinoidei ANCESTRAL SPECIES 53 ENSGT00940000177637 ENSGT00940000159300 #35 ENSGT00940000159104.d #34 ENSGT00940000158587.c.a #33 ENSGT00950000182872.f.a.b.o #32 ENSGT00940000159581.b.a #18 ENSGT00390000004215.a.b.b.c.b.d ENSGT00990000210053 ENSGT00940000161897.a ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #19 ENSGT00950000182914.a.a.a.c.a #20 ENSGT00940000155784.C.u.a #21 ENSGT00940000155113.a.a.a #22 ENSGT00390000000724.c.b.c ENSGT00940000156554.a ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000157244.a.b ENSGT00940000155333.B ENSGT00910000144338 ENSGT00940000155425 ENSGT00570000079224 ENSGT00390000002390.b.e ENSGT00940000154412.B.a ENSGT00940000158641.a.b ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 28 ENSGT00940000177637 ENSGT00940000159300.e #35 ENSGT00940000159104.d.b #34 ENSGT00940000158587.c.a.d #33 ENSGT00950000182872.f.a.b.o.c #32 ENSGT00940000159581.b.a.f.b #18 ENSGT00390000004215.a.b.b.c.b.d.k ENSGT00990000210053.a ENSGT00940000161897.a.a ENSGT00940000156930.`b ENSGT00940000154491.c.a.a.b ENSGT00950000183081.b.i.a.k ENSGT01040000240444.B.b.i #19 ENSGT00950000182914.a.a.a.c.a.e #20 ENSGT00940000155784.C.u.a.a.b #21 ENSGT00940000155113.a.a.a.a #22 ENSGT00390000000724.c.b.c.e.a ENSGT00940000156554.a.g ENSGT01030000234510.a.a.a.a.a.a.h.a.a ENSGT01030000234510.a.a.b ENSGT00940000157244.a.b.b ENSGT00940000155333.B.f ENSGT00940000155425.ab.b ENSGT00570000079224.h ENSGT00390000002390.b.e.f ENSGT00940000154412.B.a.c.a ENSGT00940000158641.a.b.b ENSGT00390000003488.b.b.b ENSGT00940000160002.r ENSGT00390000010811.b Cyprininae_a ANCESTRAL SPECIES 7 ENSGT00940000177637 ENSGT00940000159300.e #35 ENSGT00940000159104.d.b #34 ENSGT00940000158587.c.a.d #33 ENSGT00950000182872.f.a.b.o.c #32 ENSGT00940000159581.b.a.f.b #18 ENSGT00390000004215.a.b.b.c.b.d.k ENSGT00990000210053.a ENSGT00940000161897.a.a ENSGT00940000156930.`b ENSGT00940000154491.c.a.a.b ENSGT00950000183081.b.i.a.k ENSGT01040000240444.B.b.i #19 ENSGT00950000182914.a.a.a.c.a.e #20 ENSGT00940000155784.C.u.a.a.b #21 ENSGT00940000155113.a.a.a.a #22 ENSGT00390000000724.c.b.c.e.a ENSGT00940000156554.a.g ENSGT01030000234510.a.a.a.a.a.a.h.a.a ENSGT01030000234510.a.a.b.e ENSGT00940000157244.a.b.b ENSGT00940000155333.B.f ENSGT00940000155425.ab.b ENSGT00570000079224.h ENSGT00390000002390.b.e.e ENSGT00940000154412.B.a.c.b ENSGT00940000158641.a.b.a ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b.a ENSGT00940000160002.q ENSGT00390000010811.a Common carp reference MODERN SPECIES 47 ENSCCRG00000060741 #35 SLA (ENSCCRG00000041777) #34 ccn4b (ENSCCRG00000045380) #33 ndrg1b (ENSCCRG00000045391) #32 ENSCCRG00000080182 #18 csnk2a1 (ENSCCRG00000045492) zgc:194210 (ENSCCRG00000045624) ENSCCRG00000045640 ENSCCRG00000012814 scrt1b (ENSCCRG00000030586) ENSCCRG00000070623 dgat1b (ENSCCRG00000019769) ENSCCRG00000081319 #19 ENSCCRG00000019820 #20 ENSCCRG00000019848 #21 ptk2ab (ENSCCRG00000020113) #22 ldlrad4b (ENSCCRG00000059613) fam210ab (ENSCCRG00000035348) mc5rb (ENSCCRG00000079865) mc2r (ENSCCRG00000035328) lmna (ENSCCRG00000023255) ENSCCRG00000023214 pdia7 (ENSCCRG00000028167) cct3 (ENSCCRG00000005446) sema6e (ENSCCRG00000043015) ENSCCRG00000058386 tnfaip8l2b (ENSCCRG00000064921) lysmd1 (ENSCCRG00000026581) scnm1 (ENSCCRG00000078172) tmod4 (ENSCCRG00000026478) VPS72 (ENSCCRG00000026457) Golden-line barbel MODERN SPECIES 95 PHF20L1 (ENSSGRG00000000595) #36 ENSSGRG00000000605 ENSSGRG00000000607 #35 SLA (ENSSGRG00000000611) #34 ccn4b (ENSSGRG00000000649) #33 ndrg1b (ENSSGRG00000000652) #32 PTP4A3 (ENSSGRG00000000656) #18 csnk2a1 (ENSSGRG00000000675) zgc:194210 (ENSSGRG00000000722) ENSSGRG00000000744 scrt1b (ENSSGRG00000005223) dgat1b (ENSSGRG00000005251) GPR20 (ENSSGRG00000005946) #19 SLC45A4 (ENSSGRG00000005950) #20 DENND3 (ENSSGRG00000005955) #21 ptk2ab (ENSSGRG00000005999) #22 ldlrad4b (ENSSGRG00000006600) fam210ab (ENSSGRG00000006601) mc5rb (ENSSGRG00000006604) mc2r (ENSSGRG00000006606) lmna (ENSSGRG00000006624) ENSSGRG00000007303 pdia7 (ENSSGRG00000007311) cct3 (ENSSGRG00000007459) ENSSGRG00000007626 ENSSGRG00000007627 ENSSGRG00000007628 ENSSGRG00000007629 ENSSGRG00000007630 sema6e (ENSSGRG00000007636) tnfaip8l2b (ENSSGRG00000007648) Goldfish MODERN SPECIES 7 c1r (ENSCARG00000019539) ENSCARG00000019561 PHF20L1 (ENSCARG00000019577) #36 SLA (ENSCARG00000019613) #34 ccn4b (ENSCARG00000019620) #33 ndrg1b (ENSCARG00000019635) #32 ENSCARG00000019685 #18 csnk2a1 (ENSCARG00000019702) zgc:194210 (ENSCARG00000019755) SCX (ENSCARG00000019761) scrt1b (ENSCARG00000019765) dgat1b (ENSCARG00000019783) GPR20 (ENSCARG00000019871) #19 SLC45A4 (ENSCARG00000019877) #20 DENND3 (ENSCARG00000019891) #21 ptk2ab (ENSCARG00000019996) #22 ldlrad4b (ENSCARG00000022590) fam210ab (ENSCARG00000022601) mc5rb (ENSCARG00000022612) mc2r (ENSCARG00000022619) lmna (ENSCARG00000022635) ENSCARG00000022876 pdia7 (ENSCARG00000022912) cct3 (ENSCARG00000023453) ENSCARG00000024212 ENSCARG00000024242 sema6e (ENSCARG00000024262) ENSCARG00000024301 tnfaip8l2b (ENSCARG00000024303) lysmd1 (ENSCARG00000024317) scnm1 (ENSCARG00000024326) Cyprininae ANCESTRAL SPECIES 28 ENSGT00940000155783.j.a ENSGT00690000103873.b ENSGT00940000156215.r #36 ENSGT00940000159300.f #35 ENSGT00940000159104.d.a #34 ENSGT00940000158587.c.a.c #33 ENSGT00940000159581.b.a.f.a.a #18 ENSGT00390000004215.a.b.b.c.b.d.l ENSGT00940000161897.a.b ENSGT00940000156930.ab ENSGT00940000154491.c.a.a.a ENSGT00950000183081.b.i.a.l ENSGT01040000240444.B.b.j #19 ENSGT00950000182914.a.a.a.c.a.f #20 ENSGT00940000155784.C.u.a.a.a #21 ENSGT00940000155113.a.a.a.b #22 ENSGT00390000000724.c.b.c.e.b ENSGT00940000156554.a.h ENSGT01030000234510.a.a.a.a.a.a.h.a.b ENSGT00940000156212.n.b ENSGT00950000183084.b.a.a.b.e.a.b ENSGT00950000183084.b.a.a.a.i ENSGT00940000157473.b.a ENSGT00940000155783.j.b ENSGT00690000103873.a ENSGT00940000156215.q #36 ENSGT00940000177637 ENSGT00940000159300.e #35 ENSGT00940000159104.d.b #34 ENSGT00940000158587.c.a.d #33 ENSGT00950000182872.f.a.b.o.c #32 Cyprininae_a ANCESTRAL SPECIES 181 ENSGT00690000103873.b ENSGT00940000156215.r #36 ENSGT00940000159300.f #35 ENSGT00940000159104.d.a #34 ENSGT00940000158587.c.a.c #33 ENSGT00940000159581.b.a.f.a.a #18 ENSGT00390000004215.a.b.b.c.b.d.l ENSGT00940000161897.a.b ENSGT00940000156930.ab ENSGT00940000154491.c.a.a.a ENSGT00950000183081.b.i.a.l ENSGT01040000240444.B.b.j #19 ENSGT00950000182914.a.a.a.c.a.f #20 ENSGT00940000155784.C.u.a.a.a #21 ENSGT00940000155113.a.a.a.b #22 ENSGT00390000000724.c.b.c.e.b ENSGT00940000156554.a.h ENSGT01030000234510.a.a.a.a.a.a.h.a.b ENSGT01030000234510.a.a.b.f ENSGT00940000157244.a.b.a ENSGT00940000155333.B.e ENSGT00940000155425.ab.a ENSGT00570000079224.g ENSGT00390000002390.b.e.f ENSGT00940000154412.B.a.c.a ENSGT00940000158641.a.b.b ENSGT00390000003488.b.b.b ENSGT00940000160002.r ENSGT00390000010811.b ENSGT00940000158734.e Common carp reference MODERN SPECIES 2 PHF20L1 (ENSCCRG00000019700) #36 tg (ENSCCRG00000019652) #35 SLA (ENSCCRG00000019688) #34 ENSCCRG00000067838 ENSCCRG00000061748 ENSCCRG00000079857 #18 ENSCCRG00000042495 csnk2a1 (ENSCCRG00000013280) ENSCCRG00000013274 ENSCCRG00000012824 scrt1b (ENSCCRG00000027533) dgat1b (ENSCCRG00000050053) ENSCCRG00000080553 #19 ENSCCRG00000059607 #20 ENSCCRG00000050041 #21 ptk2ab (ENSCCRG00000042172) #22 ldlrad4b (ENSCCRG00000062199) fam210ab (ENSCCRG00000035323) ENSCCRG00000049724 lmna (ENSCCRG00000023524) ENSCCRG00000024580 pdia7 (ENSCCRG00000005732) cct3 (ENSCCRG00000005632) ENSCCRG00000005900 ENSCCRG00000010934 ENSCCRG00000075497 sema6e (ENSCCRG00000043021) lysmd1 (ENSCCRG00000057750) ENSCCRG00000074329 tnfaip8l2b (ENSCCRG00000061296) ENSCCRG00000076523 Golden-line barbel MODERN SPECIES 458 rbp5 (ENSSGRG00000015917) c1s.1 (ENSSGRG00000015919) PHF20L1 (ENSSGRG00000015920) #36 ENSSGRG00000015922 tg (ENSSGRG00000015924) #35 SLA (ENSSGRG00000015927) #34 ccn4b (ENSSGRG00000015941) #33 ENSSGRG00000015942 #18 csnk2a1 (ENSSGRG00000015953) SCX (ENSSGRG00000015954) ENSSGRG00000015956 scrt1b (ENSSGRG00000015958) dgat1b (ENSSGRG00000015966) SLC45A4 (ENSSGRG00000016456) #20 ENSSGRG00000016460 #21 ptk2ab (ENSSGRG00000016511) #22 Goldfish DUPLICATION Goldfish MODERN SPECIES 35 zdhhc18a (ENSCARG00000028822) pigv (ENSCARG00000028804) ARID1A (ENSCARG00000028624) SNIP1 (ENSCARG00000028599) dnali1 (ENSCARG00000028576) rspo1 (ENSCARG00000028561) FHL3 (ENSCARG00000028549) utp11 (ENSCARG00000028537) pou3f1 (ENSCARG00000028532) rragca (ENSCARG00000028527) GJA9 (ENSCARG00000028523) rhbdl2 (ENSCARG00000028344) dgat1b (ENSCARG00000028167) GPR20 (ENSCARG00000028151) #19 SLC45A4 (ENSCARG00000028146) #20 ptk2ab (ENSCARG00000027545) #22 ldlrad4b (ENSCARG00000027512) fam210ab (ENSCARG00000027500) lmna (ENSCARG00000027211) ENSCARG00000027182 cct3 (ENSCARG00000026999) ENSCARG00000026953 ENSCARG00000026939 sema6e (ENSCARG00000026829) sema6e (ENSCARG00000026749) tnfaip8l2b (ENSCARG00000026725) lysmd1 (ENSCARG00000026711) tmod4 (ENSCARG00000026657) mcl1b (ENSCARG00000026650) ensab (ENSCARG00000026641) onecutl (ENSCARG00000026616) Goldfish MODERN SPECIES 337 ENSCARG00000040166 scrt1b (ENSCARG00000041649) dgat1b (ENSCARG00000041841) SLC45A4 (ENSCARG00000045305) #20 DENND3 (ENSCARG00000045324) #21 ptk2ab (ENSCARG00000045562) #22 ldlrad4b (ENSCARG00000047317) fam210ab (ENSCARG00000047326) Zebrafish MODERN SPECIES 7 SLA (ENSDARG00000100287) #34 tg (ENSDARG00000020084) #35 ccn4b (ENSDARG00000076685) #33 ndrg1b (ENSDARG00000010420) #32 ENSDARG00000054814 #18 csnk2a1 (ENSDARG00000002082) zgc:194210 (ENSDARG00000073799) SCX (ENSDARG00000011635) ENSDARG00000016573 scrt1b (ENSDARG00000040214) dgat1b (ENSDARG00000054914) GPR20 (ENSDARG00000077427) #19 ENSDARG00000019585 SLC45A4 (ENSDARG00000077326) #20 ENSDARG00000013153 #21 ptk2ab (ENSDARG00000004672) #22 ldlrad4b (ENSDARG00000054941) fam210ab (ENSDARG00000040186) mc5rb (ENSDARG00000054946) mc2r (ENSDARG00000054949) lmna (ENSDARG00000013415) ENSDARG00000060753 pdia7 (ENSDARG00000014015) cct3 (ENSDARG00000016173) ENSDARG00000076861 ENSDARG00000112961 sema6e (ENSDARG00000000189) tnfaip8l2b (ENSDARG00000046148) lysmd1 (ENSDARG00000054789) scnm1 (ENSDARG00000003027) tmod4 (ENSDARG00000020890) Otomorpha ANCESTRAL SPECIES 96 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000166193 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b ENSGT00940000162307 ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00730000111042 ENSGT00940000153117.A ENSGT00940000154655.a.i.b ENSGT01030000235077 ENSGT00940000176888 ENSGT00940000160706 ENSGT00390000010887.a ENSGT00940000155321.e ENSGT00390000008161.a.b ENSGT00390000015984 Clupeiformes ANCESTRAL SPECIES 15 ENSGT00940000159344 ENSGT00940000162732 ENSGT00940000157683 ENSGT00940000159188 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00940000160042 ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000166193 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a.b #22 ENSGT00550000074698.a.b ENSGT00530000063461.A.b ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00730000111042 ENSGT00940000153117.A ENSGT00940000154655.a.i.b ENSGT01030000235077 ENSGT00940000160706 ENSGT00390000010887.a ENSGT00940000155321.e ENSGT00390000008161.a.b ENSGT00390000015984 ENSGT00940000158117 ENSGT00390000016823 Atlantic herring MODERN SPECIES 10 ENSCHAG00000020872 dlx6a (ENSCHAG00000020895) dlx5a (ENSCHAG00000020922) ago2 (ENSCHAG00000021026) #23 chrac1 (ENSCHAG00000023881) ENSCHAG00000023887 ENSCHAG00000023899 scrt1a (ENSCHAG00000023906) zgc:63863 (ENSCHAG00000023910) dgat1a (ENSCHAG00000023926) cfap20 (ENSCHAG00000024045) ENSCHAG00000024051 GPR20 (ENSCHAG00000024087) #19 SLC45A4 (ENSCHAG00000024097) #20 DENND3 (ENSCHAG00000024175) #21 PTK2 (ENSCHAG00000024267) #22 rplp1 (ENSCHAG00000025085) clptm1l (ENSCHAG00000025096) CSMD3 (ENSCHAG00000025377) ENSCHAG00000026391 trps1 (ENSCHAG00000026398) utp23 (ENSCHAG00000000495) rad21b (ENSCHAG00000000617) ENSCHAG00000000784 SLC30A8 (ENSCHAG00000000875) med30 (ENSCHAG00000000947) ext1b (ENSCHAG00000001106) SAMD12 (ENSCHAG00000001417) ENSCHAG00000001476 ENSCHAG00000001503 ENSCHAG00000001531 Denticle herring MODERN SPECIES 12 SLC25A13 (ENSDCDG00000028567) DYNC1I1 (ENSDCDG00000023856) ENSDCDG00000023800 ago2 (ENSDCDG00000023788) #23 chrac1 (ENSDCDG00000023780) ENSDCDG00000033344 ENSDCDG00000033340 scrt1a (ENSDCDG00000033337) zgc:63863 (ENSDCDG00000033334) dgat1a (ENSDCDG00000033086) cfap20 (ENSDCDG00000033065) ENSDCDG00000033064 GPR20 (ENSDCDG00000033058) #19 SLC45A4 (ENSDCDG00000033056) #20 DENND3 (ENSDCDG00000032981) #21 PTK2 (ENSDCDG00000032784) #22 rplp1 (ENSDCDG00000032758) clptm1l (ENSDCDG00000032720) CSMD3 (ENSDCDG00000032640) trps1 (ENSDCDG00000032596) ENSDCDG00000032595 ENSDCDG00000032593 ENSDCDG00000032591 sla1a (ENSDCDG00000032590) #34 ccn4a (ENSDCDG00000032495) #33 eif3hb (ENSDCDG00000032473) utp23 (ENSDCDG00000032468) ENSDCDG00000032466 ENSDCDG00000032464 sla1a (ENSDCDG00000032461) #34 ccn4a (ENSDCDG00000032460) #33 Otophysi ANCESTRAL SPECIES 170 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000157768 ENSGT00940000166193 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000157780 ENSGT00940000155602 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b ENSGT00510000047245 ENSGT00500000044921.a ENSGT00940000159017.a.b ENSGT00500000045044 ENSGT00390000018500.b.b.b ENSGT00390000013823.a ENSGT00950000182908.C.a ENSGT00950000182856.a.a.a ENSGT00940000178869 ENSGT00950000182908.C.b ENSGT00940000154486.b.a.b ENSGT00940000166341 ENSGT00940000163428.b.a Characiphysae ANCESTRAL SPECIES 26 ENSGT00940000166193 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000157780 ENSGT00940000155602 ENSGT00940000155784.C.u.b #21 ENSGT00940000164832.e.b ENSGT00940000155113.a.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b ENSGT00510000047245 ENSGT00500000044921.a ENSGT00940000159017.a.b ENSGT00500000045044 ENSGT00390000018500.b.b.b ENSGT00390000013823.a ENSGT00950000182908.C.a ENSGT00950000182856.a.a.a ENSGT00940000154486.b.a.b ENSGT00940000166341 ENSGT00940000163428.b.a ENSGT00940000161409 ENSGT00390000005553 Channel catfish MODERN SPECIES 16 nfatc1 (ENSIPUG00000002936) atp9b (ENSIPUG00000002960) sall3b (ENSIPUG00000003006) GALR1 (ENSIPUG00000003021) ENSIPUG00000003031 znf516 (ENSIPUG00000003046) tshz1 (ENSIPUG00000003059) cndp2 (ENSIPUG00000003077) ENSIPUG00000003090 #21 klhl7 (ENSIPUG00000003141) lrrc3b (ENSIPUG00000003166) slc45a4 (ENSIPUG00000003180) #20 ENSIPUG00000003213 #19 ggcta (ENSIPUG00000003221) ENSIPUG00000003235 ptk2 (ENSIPUG00000003268) #22 rplp1 (ENSIPUG00000003514) clptm1l (ENSIPUG00000003529) snrpd1 (ENSIPUG00000003576) ggcta (ENSIPUG00000003587) znrf2 (ENSIPUG00000003600) mturn (ENSIPUG00000003620) SH3BP5 (ENSIPUG00000003633) btd (ENSIPUG00000003644) ANKRD28 (ENSIPUG00000003678) Snx13 (ENSIPUG00000003913) ENSIPUG00000004050 twist1a (ENSIPUG00000004071) FERD3L (ENSIPUG00000004109) twistnb (ENSIPUG00000004117) tmem196 (ENSIPUG00000004133) Characiphysae_b ANCESTRAL SPECIES 17 ENSGT00940000157616.j.a ENSGT00940000157071 ENSGT00940000159356.a.b ENSGT01050000244841.A.b.a.b.a.a.i ENSGT00390000014772.k ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000156500 ENSGT00940000166193 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000157780 ENSGT00940000155602 ENSGT00940000155784.C.u.b #21 ENSGT00940000164832.e.b ENSGT00940000155113.a.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b ENSGT00510000047245 ENSGT00500000044921.a ENSGT00940000159017.a.b ENSGT00500000045044 ENSGT00390000018500.b.b.b ENSGT00390000013823.a ENSGT00950000182908.C.a ENSGT00950000182856.a.a.a ENSGT00940000154486.b.a.b ENSGT00940000166341 ENSGT00940000163428.b.a ENSGT00940000161409 ENSGT00390000005553 Characoidei ANCESTRAL SPECIES 33 ENSGT00940000157616.j.a ENSGT00940000157071 ENSGT00940000159356.a.b ENSGT01050000244841.A.b.a.b.a.a.i ENSGT00390000014772.k ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000156500 ENSGT00940000166193 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000157780 ENSGT00940000155602 ENSGT00940000155784.C.u.b #21 ENSGT00940000164832.e.b ENSGT00940000155113.a.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b ENSGT00510000047245 ENSGT00500000044921.a ENSGT00940000159017.a.b ENSGT00500000045044 ENSGT00390000018500.b.b.b ENSGT00390000013823.a ENSGT00950000182908.C.a ENSGT00950000182856.a.a.a ENSGT00940000163428.b.a ENSGT00940000161409 ENSGT00390000005553 ENSGT00940000163281.b ENSGT01090000259987.b.a Mexicana tetra MODERN SPECIES 144 cndp2 (ENSAMXG00000043870) ENSAMXG00000016489 GPR20 (ENSAMXG00000025141) #19 SLC45A4 (ENSAMXG00000004424) #20 lrrc3b (ENSAMXG00000025609) klhl7 (ENSAMXG00000004443) DENND3 (ENSAMXG00000004469) #21 ENSAMXG00000031714 PTK2 (ENSAMXG00000004491) #22 rplp1 (ENSAMXG00000029436) clptm1l (ENSAMXG00000004561) snrpd1 (ENSAMXG00000004589) ggcta (ENSAMXG00000038966) znrf2a (ENSAMXG00000035513) mturn (ENSAMXG00000032980) SH3BP5 (ENSAMXG00000039958) btd (ENSAMXG00000039474) ANKRD28 (ENSAMXG00000004638) SNX13 (ENSAMXG00000004675) Red-bellied piranha MODERN SPECIES 68 nfatc1 (ENSPNAG00000017021) atp9b (ENSPNAG00000017126) sall3b (ENSPNAG00000017141) GALR1 (ENSPNAG00000017178) ENSPNAG00000017263 znf516 (ENSPNAG00000017286) tshz1 (ENSPNAG00000017293) cndp2 (ENSPNAG00000017310) ENSPNAG00000017423 GPR20 (ENSPNAG00000017441) #19 SLC45A4 (ENSPNAG00000017495) #20 lrrc3b (ENSPNAG00000017517) klhl7 (ENSPNAG00000017551) DENND3 (ENSPNAG00000017591) #21 ENSPNAG00000017618 PTK2 (ENSPNAG00000017725) #22 rplp1 (ENSPNAG00000017741) ENSPNAG00000017758 clptm1l (ENSPNAG00000017807) snrpd1 (ENSPNAG00000017824) ggcta (ENSPNAG00000017854) znrf2a (ENSPNAG00000017867) mturn (ENSPNAG00000017886) ENSPNAG00000017917 ifnphi1 (ENSPNAG00000017929) ENSPNAG00000005332 ENSPNAG00000017996 ENSPNAG00000018022 TANC2 (ENSPNAG00000018244) cyb561 (ENSPNAG00000003519) HDAC5 (ENSPNAG00000018413) Electric eel MODERN SPECIES 868 ENSEEEG00000013260 PTK2 (ENSEEEG00000013275) #22 rplp1 (ENSEEEG00000013353) clptm1l (ENSEEEG00000013365) snrpd1 (ENSEEEG00000013549) ggcta (ENSEEEG00000013550) znrf2a (ENSEEEG00000013551) mturn (ENSEEEG00000013552) SH3BP5 (ENSEEEG00000013553) btd (ENSEEEG00000013555) ENSEEEG00000013560 Cyprinoidei ANCESTRAL SPECIES 35 ENSGT00950000183186.B.b.d ENSGT00390000010209.c.a ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000157768 ENSGT00940000166193 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000157780 ENSGT00940000155602 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b ENSGT00510000047245 ENSGT00500000044921.a ENSGT01100000263547.a.b.b.b.b.a.b.a.a.a.b.a.a ENSGT00940000159017.a.b.a ENSGT00500000045044 ENSGT00390000018500.b.b.b ENSGT00390000013823.a ENSGT00950000182908.C.a ENSGT00950000182856.a.a.a ENSGT00940000178869 ENSGT00950000182908.C.b ENSGT00940000166341 ENSGT00940000163428.b.a Zebrafish MODERN SPECIES 10 zdhhc3b (ENSDARG00000058830) ENSDARG00000103817 ENSDARG00000099747 slc39a4 (ENSDARG00000059361) scrt1a (ENSDARG00000100821) zgc:63863 (ENSDARG00000099753) dgat1a (ENSDARG00000103503) cfap20 (ENSDARG00000100514) OXSM (ENSDARG00000098855) btr29 (ENSDARG00000099138) ENSDARG00000099438 SLC45A4 (ENSDARG00000104981) #20 lrrc3b (ENSDARG00000063215) klhl7 (ENSDARG00000101445) DENND3 (ENSDARG00000078797) #21 PTK2 (ENSDARG00000100456) #22 rplp1 (ENSDARG00000021864) clptm1l (ENSDARG00000021048) snrpd1 (ENSDARG00000011648) ggcta (ENSDARG00000076406) ENSDARG00000079456 znrf2a (ENSDARG00000077855) mturn (ENSDARG00000074505) SH3BP5 (ENSDARG00000100529) btd (ENSDARG00000099596) ENSDARG00000086326 SNX13 (ENSDARG00000013828) twist1a (ENSDARG00000030402) FERD3L (ENSDARG00000092160) ENSDARG00000028222 sp8a (ENSDARG00000011870) Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 55 ENSGT00390000014944.b.a ENSGT00950000183081.b.i.b.c ENSGT00390000004554.k.b ENSGT00940000157768.a ENSGT00940000166193.b ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b.d #20 ENSGT00940000157780.rb.b ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.b.b.b.b.b.a.b ENSGT00940000157768.b ENSGT00940000166193.a ENSGT00950000182914.a.a.a.c.b.c #20 ENSGT00940000157780.rb.a ENSGT00940000155602 ENSGT00940000155784.C.u.b.a #21 ENSGT00940000155113.a.a.b.a.a #22 ENSGT00550000074698.a.a ENSGT00940000155784.C.u.b.b #21 ENSGT00940000155113.a.a.b.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b.c ENSGT00510000047245.ob.a ENSGT00500000044921.a ENSGT01100000263547.a.b.b.b.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000159017.a.b.a.a ENSGT00500000045044.g ENSGT00390000018500.b.b.b.b ENSGT00390000013823.a ENSGT00950000182908.C.a.j.a.b ENSGT01030000234592.A.a.b.c.a.b.b ENSGT01030000234592.A.a.b.c.a.b.a.b.a Goldfish DUPLICATION Goldfish DUPLICATION Goldfish MODERN SPECIES 10 polr1f (ENSCARG00000064285) twist1a (ENSCARG00000064294) ENSCARG00000064310 SNX13 (ENSCARG00000064353) ENSCARG00000065533 ENSCARG00000065538 ENSCARG00000065541 #22 ENSCARG00000065552 clptm1l (ENSCARG00000065626) snrpd1 (ENSCARG00000065987) ENSCARG00000066016 ENSCARG00000066032 ENSCARG00000066038 mturn (ENSCARG00000066047) znrf2a (ENSCARG00000066061) PTK2 (ENSCARG00000066085) #22 znrf2a (ENSCARG00000066189) mturn (ENSCARG00000066197) SH3BP5 (ENSCARG00000066204) ENSCARG00000066288 ENSCARG00000067326 #22 DENND3 (ENSCARG00000067335) #21 tert (ENSCARG00000067362) ENSCARG00000067445 daxx (ENSCARG00000067608) zbtb22b (ENSCARG00000067623) ENSCARG00000067635 znf384a (ENSCARG00000067661) ENSCARG00000067664 FLOT1 (ENSCARG00000067669) ENSCARG00000067727 Goldfish MODERN SPECIES 10 wipf2b (ENSCARG00000044915) JUP (ENSCARG00000042945) eif1 (ENSCARG00000042807) ENSCARG00000042724 ENSCARG00000042659 ENSCARG00000067727 FLOT1 (ENSCARG00000067669) ENSCARG00000067664 znf384a (ENSCARG00000067661) ENSCARG00000067635 zbtb22b (ENSCARG00000067623) daxx (ENSCARG00000067608) ENSCARG00000067445 tert (ENSCARG00000067362) DENND3 (ENSCARG00000067335) #21 ENSCARG00000067326 #22 ENSCARG00000066288 SH3BP5 (ENSCARG00000066204) mturn (ENSCARG00000066197) znrf2a (ENSCARG00000066189) PTK2 (ENSCARG00000066085) #22 znrf2a (ENSCARG00000066061) mturn (ENSCARG00000066047) ENSCARG00000066038 ENSCARG00000066032 ENSCARG00000066016 snrpd1 (ENSCARG00000065987) clptm1l (ENSCARG00000065626) ENSCARG00000065552 ENSCARG00000065541 #22 ENSCARG00000065538 Goldfish MODERN SPECIES 10 SCGN (ENSCARG00000064106) rnf139 (ENSCARG00000064122) tmem65 (ENSCARG00000064144) ENSCARG00000064159 scn1bb (ENSCARG00000064173) sp4 (ENSCARG00000064203) sp8a (ENSCARG00000064243) ITGB8 (ENSCARG00000064263) ENSCARG00000064275 polr1f (ENSCARG00000064285) twist1a (ENSCARG00000064294) ENSCARG00000064310 SNX13 (ENSCARG00000064353) ENSCARG00000065533 ENSCARG00000065538 ENSCARG00000065541 #22 ENSCARG00000065552 clptm1l (ENSCARG00000065626) snrpd1 (ENSCARG00000065987) ENSCARG00000066016 ENSCARG00000066032 ENSCARG00000066038 mturn (ENSCARG00000066047) znrf2a (ENSCARG00000066061) PTK2 (ENSCARG00000066085) #22 znrf2a (ENSCARG00000066189) mturn (ENSCARG00000066197) SH3BP5 (ENSCARG00000066204) ENSCARG00000066288 ENSCARG00000067326 #22 DENND3 (ENSCARG00000067335) #21 Cyprininae_a ANCESTRAL SPECIES 43 ENSGT00940000180503.a ENSGT00940000160576.k ENSGT00390000014107.a.b.`b ENSGT00940000160042.a.b ENSGT00940000154491.c.a.b.a ENSGT00390000014944.b.b ENSGT00950000183081.b.i.b.d ENSGT00390000004554.k.a ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.b.b.b.b.b.a.b ENSGT00940000157768.b ENSGT00940000166193.a ENSGT00950000182914.a.a.a.c.b.c #20 ENSGT00940000157780.rb.a ENSGT00940000155602 ENSGT00940000155784.C.u.b.a #21 ENSGT00940000155113.a.a.b.a.a #22 ENSGT00550000074698.b ENSGT00550000074698.a.a ENSGT00530000063461.A.b.d ENSGT00510000047245.nb ENSGT01090000260586 ENSGT01100000263547.a.b.b.b.b.a.b.a.a.a.b.a.a.a.a.a ENSGT00940000159017.a.b.a.b ENSGT00500000045044.h ENSGT00390000018500.b.b.b.a ENSGT00950000182908.C.a.j.a.a ENSGT00950000182908.C.a.j.b ENSGT00950000182856.a.a.a.r ENSGT00940000166341.u.b ENSGT00940000163428.b.a.j.b ENSGT00940000161409.d Common carp reference MODERN SPECIES 12 ENSCCRG00000057921 ENSCCRG00000054779 ENSCCRG00000021214 scrt1a (ENSCCRG00000012351) zgc:63863 (ENSCCRG00000053054) dgat1a (ENSCCRG00000078368) cfap20 (ENSCCRG00000026035) ENSCCRG00000041711 ENSCCRG00000070727 ENSCCRG00000062535 ENSCCRG00000065659 ENSCCRG00000007227 #20 lrrc3b (ENSCCRG00000060096) klhl7 (ENSCCRG00000028109) ENSCCRG00000004661 #21 ENSCCRG00000000513 #22 rplp1 (ENSCCRG00000027873) clptm1l (ENSCCRG00000016498) snrpd1 (ENSCCRG00000064087) ENSCCRG00000066922 ENSCCRG00000076891 ENSCCRG00000060398 ENSCCRG00000004108 ENSCCRG00000079799 znrf2a (ENSCCRG00000016439) ENSCCRG00000016428 ENSCCRG00000078961 ENSCCRG00000063008 ENSCCRG00000016456 SNX13 (ENSCCRG00000070657) ENSCCRG00000038881 Golden-line barbel MODERN SPECIES 602 ENSSGRG00000053705 ENSSGRG00000053704 scrt1a (ENSSGRG00000053703) zgc:63863 (ENSSGRG00000053702) dgat1a (ENSSGRG00000053701) cfap20 (ENSSGRG00000053694) ENSSGRG00000053680 OXSM (ENSSGRG00000053679) SLC45A4 (ENSSGRG00000053676) #20 lrrc3b (ENSSGRG00000053675) lrrc3b (ENSSGRG00000053674) klhl7 (ENSSGRG00000053672) ENSSGRG00000053671 #21 ENSSGRG00000053665 #21 ENSSGRG00000053664 ENSSGRG00000053627 #22 rplp1 (ENSSGRG00000053617) snrpd1 (ENSSGRG00000053614) ENSSGRG00000053612 clptm1l (ENSSGRG00000053562) Cyprininae ANCESTRAL SPECIES 55 ENSGT00940000157768.a ENSGT00940000166193.b ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b.d #20 ENSGT00940000157780.rb.b ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.b.b.b.b.b.a.b ENSGT00940000157768.b ENSGT00940000166193.a ENSGT00950000182914.a.a.a.c.b.c #20 ENSGT00940000157780.rb.a ENSGT00940000155602 ENSGT00940000155784.C.u.b.a #21 ENSGT00940000155113.a.a.b.a.a #22 ENSGT00550000074698.a.a ENSGT00940000155784.C.u.b.b #21 ENSGT00940000155113.a.a.b.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b.c ENSGT00510000047245.ob.a ENSGT00500000044921.a ENSGT01100000263547.a.b.b.b.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000159017.a.b.a.a ENSGT00500000045044.g ENSGT00390000018500.b.b.b.b ENSGT00390000013823.a ENSGT00950000182908.C.a.j.a.b ENSGT01030000234592.A.a.b.c.a.b.b ENSGT01030000234592.A.a.b.c.a.b.a.b.a ENSGT00950000182856.a.a.a.q ENSGT00940000166341.u.a ENSGT00940000163428.b.a.j.a Goldfish MODERN SPECIES 38 sema6d (ENSCARG00000032391) ENSCARG00000032447 ENSCARG00000032455 ENSCARG00000032464 ENSCARG00000032469 ENSCARG00000032487 glmp (ENSCARG00000032505) ENSCARG00000032515 eomesa (ENSCARG00000032530) ENSCARG00000032544 TGFBR2 (ENSCARG00000032564) ENSCARG00000032632 ENSCARG00000032637 lrrc3b (ENSCARG00000032644) DENND3 (ENSCARG00000032651) #21 PTK2 (ENSCARG00000032795) #22 rplp1 (ENSCARG00000035331) clptm1l (ENSCARG00000035341) snrpd1 (ENSCARG00000035461) ggcta (ENSCARG00000035468) ENSCARG00000035484 znrf2a (ENSCARG00000035502) mturn (ENSCARG00000035518) SH3BP5 (ENSCARG00000035531) btd (ENSCARG00000035550) ENSCARG00000035557 ENSCARG00000035570 TGFBR2 (ENSCARG00000035583) ENSCARG00000035715 ENSCARG00000035738 ENSCARG00000035763 Cyprininae_a ANCESTRAL SPECIES 80 ENSGT00940000159459.db.b ENSGT00940000160576.l ENSGT00390000014107.a.b.ab ENSGT01100000263531.A.j.a ENSGT00940000160042.a.a ENSGT00940000154491.c.a.b.b ENSGT00390000014944.b.a ENSGT00950000183081.b.i.b.c ENSGT00390000004554.k.b ENSGT00940000157768.a ENSGT00940000166193.b ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b.d #20 ENSGT00940000157780.rb.b ENSGT00940000155784.C.u.b.b #21 ENSGT00940000155113.a.a.b.a.b #22 ENSGT00550000074698.a.b ENSGT00530000063461.A.b.c ENSGT00510000047245.ob.a ENSGT00500000044921.a ENSGT01100000263547.a.b.b.b.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000159017.a.b.a.a ENSGT00500000045044.g ENSGT00390000018500.b.b.b.b ENSGT00390000013823.a.i ENSGT00950000182908.C.a.j.a.b ENSGT01030000234592.A.a.b.c.a.b.b ENSGT01030000234592.A.a.b.c.a.b.a.b.a ENSGT00950000182856.a.a.a.q ENSGT00940000166341.u.a ENSGT00940000163428.b.a.j.a Common carp reference MODERN SPECIES 31 ehmt2 (ENSCCRG00000006702) ENSCCRG00000067978 ENSCCRG00000052800 slc44a4 (ENSCCRG00000031086) ENSCCRG00000021130 scrt1a (ENSCCRG00000079030) zgc:63863 (ENSCCRG00000034677) dgat1a (ENSCCRG00000064682) cfap20 (ENSCCRG00000054535) ENSCCRG00000058852 ENSCCRG00000001552 ENSCCRG00000001527 #19 SLC45A4 (ENSCCRG00000001335) #20 lrrc3b (ENSCCRG00000072455) ENSCCRG00000058615 #21 ENSCCRG00000027891 #22 ENSCCRG00000060945 snrpd1 (ENSCCRG00000027883) clptm1l (ENSCCRG00000005615) ggcta (ENSCCRG00000067420) ENSCCRG00000073978 ENSCCRG00000061212 znrf2a (ENSCCRG00000058021) btd (ENSCCRG00000041725) ENSCCRG00000014678 ENSCCRG00000014651 ENSCCRG00000082489 SNX13 (ENSCCRG00000064645) ENSCCRG00000030173 twist1a (ENSCCRG00000030178) FERD3L (ENSCCRG00000030181) Golden-line barbel MODERN SPECIES 695 ENSSGRG00000010616 GPR20 (ENSSGRG00000010619) #19 SLC45A4 (ENSSGRG00000010620) #20 lrrc3b (ENSSGRG00000010642) klhl7 (ENSSGRG00000010647) ENSSGRG00000010650 #21 ENSSGRG00000010651 #21 ENSSGRG00000010665 #22 rplp1 (ENSSGRG00000010876) clptm1l (ENSSGRG00000010877) snrpd1 (ENSSGRG00000010881) ENSSGRG00000010882 znrf2a (ENSSGRG00000010884) ENSSGRG00000010885 mturn (ENSSGRG00000010886) SH3BP5 (ENSSGRG00000010887) ENSSGRG00000010909 btd (ENSSGRG00000010910) ANKRD28 (ENSSGRG00000010912) ENSSGRG00000011007 Cyprininae ANCESTRAL SPECIES ENSGT00940000155113.a.a.b.b #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000155113.a.a.b.b #22 Golden-line barbel MODERN SPECIES 4654 ENSSGRG00000003559 #22 Euteleosteomorpha ANCESTRAL SPECIES 47 ENSGT00940000163790 ENSGT00390000016546 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000166193 ENSGT00950000182914.a.a.a.c.b #20 ENSGT01030000235399 ENSGT00940000157893 ENSGT01040000240444.B.a #19 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000163549 ENSGT00940000161897.b.a ENSGT00390000018422 ENSGT00940000163790 ENSGT00390000016546 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000166193 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00980000199189.d ENSGT00980000199189.c ENSGT00530000063461.A.b ENSGT00940000155549.a.a.b ENSGT00940000157893.c.a ENSGT00390000014398 ENSGT00550000074870.y.b ENSGT00910000144277.f.b Northern pike MODERN SPECIES 9 hgh1 (ENSELUG00000022164) RECQL4 (ENSELUG00000022177) ENSELUG00000022216 scrt1a (ENSELUG00000022228) zgc:63863 (ENSELUG00000022243) dgat1a (ENSELUG00000022309) cfap20 (ENSELUG00000022376) ENSELUG00000025372 ENSELUG00000032134 ENSELUG00000030175 ENSELUG00000022550 ENSELUG00000029394 GPR20 (ENSELUG00000022571) #19 SLC45A4 (ENSELUG00000022641) #20 DENND3 (ENSELUG00000022669) #21 PTK2 (ENSELUG00000022774) #22 rplp1 (ENSELUG00000030035) ENSELUG00000022792 clptm1l (ENSELUG00000022866) CSMD3 (ENSELUG00000023030) ENSELUG00000034103 trps1 (ENSELUG00000023061) wdyhv1 (ENSELUG00000023170) psma2 (ENSELUG00000023135) ENSELUG00000000986 ENSELUG00000023182 rpa3 (ENSELUG00000023203) ENSELUG00000027618 glcci1a (ENSELUG00000023235) phf14 (ENSELUG00000023248) nxph1 (ENSELUG00000023269) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 524 ENSGT00940000155113.a.a.c.a #22 ENSGT00550000074698.c.a ENSGT00980000199189.c ENSGT00530000063461.A.b.a ENSGT00940000155549.a.a.b ENSGT00390000014398 ENSGT00550000074870.y.b.a ENSGT00910000144277.f.b.b ENSGT00990000212686 ENSGT00940000157751 ENSGT00940000156338.b.c ENSGT01090000260268.B ENSGT01060000251440 ENSGT00940000154450.tc.b ENSGT00940000158787.h.b ENSGT01090000260070.C.b.c Salmoninae_a ANCESTRAL SPECIES 28 ENSGT00940000163549.h ENSGT00940000161897.b.a.c ENSGT00390000018422.e ENSGT01020000232004 ENSGT00390000016546.j ENSGT00940000160387.d ENSGT00940000160042.d.a ENSGT00940000154491.c.a.b.c ENSGT00390000014944.b.c ENSGT00950000183081.b.i.b.e ENSGT00390000004554.m ENSGT00940000165466.d ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b.a #20 ENSGT00940000155784.C.u.b.d #21 ENSGT00940000155113.a.a.c.a #22 ENSGT00550000074698.c.a ENSGT00980000199189.c ENSGT00530000063461.A.b.a ENSGT00940000157893.c.b ENSGT00390000014398 ENSGT00550000074870.y.b.a ENSGT00910000144277.f.b.b ENSGT00990000212686 ENSGT00940000157751 ENSGT00940000156338.b.c ENSGT01090000260268.B ENSGT01060000251440 ENSGT00940000154450.tc.b ENSGT00940000158787.h.b ENSGT01090000260070.C.b.c Oncorhynchus ANCESTRAL SPECIES 29 ENSGT01060000248801.d.a ENSGT00940000163549.h ENSGT00940000161897.b.a.c ENSGT00390000018422.e ENSGT00390000016546.j ENSGT00940000160387.d ENSGT00940000160042.d.a ENSGT00940000154491.c.a.b.c ENSGT00390000014944.b.c ENSGT00950000183081.b.i.b.e ENSGT00390000004554.m ENSGT00940000165466.d ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b.a #20 ENSGT00940000155784.C.u.b.d #21 ENSGT00940000155113.a.a.c.a #22 ENSGT00550000074698.c.a ENSGT00980000199189.c ENSGT00530000063461.A.b.a ENSGT00940000157893.c.b ENSGT00390000014398 ENSGT00550000074870.y.b.a ENSGT00910000144277.f.b.b ENSGT00990000212686 ENSGT00940000157751 ENSGT01060000251440 ENSGT00940000154450.tc.b ENSGT00940000158787.h.b ENSGT01090000260070.C.b.c ENSGT00390000017974.ob.e ENSGT00950000183028.a.b.b.e Oncorhynchus_a ANCESTRAL SPECIES 29 ENSGT01060000248801.d.a ENSGT00940000163549.h ENSGT00940000161897.b.a.c ENSGT00390000018422.e ENSGT00390000016546.j ENSGT00940000160387.d ENSGT00940000160042.d.a ENSGT00940000154491.c.a.b.c ENSGT00390000014944.b.c ENSGT00950000183081.b.i.b.e ENSGT00390000004554.m ENSGT00940000165466.d ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b.a #20 ENSGT00940000155784.C.u.b.d #21 ENSGT00940000155113.a.a.c.a #22 ENSGT00550000074698.c.a ENSGT00980000199189.c ENSGT00530000063461.A.b.a ENSGT00940000155549.a.a.a.b ENSGT00950000182901 ENSGT00940000157893.c.b ENSGT00390000014398 ENSGT00550000074870.y.b.a.a ENSGT00910000144277.f.b.b ENSGT00990000212686 ENSGT00940000157751 ENSGT01010000222294.c.b.b.b.c.a.a.b.b.b ENSGT01060000251440 ENSGT00940000154450.tc.b ENSGT00940000158787.h.b Coho salmon MODERN SPECIES 8 ENSOKIG00005017294 hsf1 (ENSOKIG00005017234) scxa (ENSOKIG00005017210) bop1 (ENSOKIG00005016763) hgh1 (ENSOKIG00005016743) ENSOKIG00005016515 ENSOKIG00005016485 scrt1a (ENSOKIG00005016473) zgc:63863 (ENSOKIG00005016455) dgat1a (ENSOKIG00005016352) cfap20 (ENSOKIG00005016327) ENSOKIG00005016278 GPR20 (ENSOKIG00005016262) #19 SLC45A4 (ENSOKIG00005016252) #20 DENND3 (ENSOKIG00005015900) #21 PTK2 (ENSOKIG00005012789) #22 rplp1 (ENSOKIG00005012592) clptm1l (ENSOKIG00005012492) ENSOKIG00005012473 CSMD3 (ENSOKIG00005011985) ENSOKIG00005011901 ENSOKIG00005011883 ENSOKIG00005011874 TRPS1 (ENSOKIG00005011868) wdyhv1 (ENSOKIG00005011861) PSMA2 (ENSOKIG00005011832) SDHA (ENSOKIG00005011241) ENSOKIG00005011197 KDM1B (ENSOKIG00005008784) ENSOKIG00005008619 ENSOKIG00005008596 Chinook salmon MODERN SPECIES 2912 ENSOTSG00005022992 INTS1 (ENSOTSG00005023000) mafk (ENSOTSG00005023052) tmem184a (ENSOTSG00005023054) psmg3 (ENSOTSG00005023314) ELFN1 (ENSOTSG00005023316) MRM2 (ENSOTSG00005023318) nudt1 (ENSOTSG00005023319) snx8a (ENSOTSG00005023321) TTYH3 (ENSOTSG00005023335) lfng (ENSOTSG00005024797) rps11 (ENSOTSG00005024800) baxa (ENSOTSG00005024806) ENSOTSG00005024807 ENSOTSG00005024810 #21 ENSOTSG00005024811 #22 rplp1 (ENSOTSG00005025319) ENSOTSG00005025320 clptm1l (ENSOTSG00005025325) Rainbow trout MODERN SPECIES 9 ENSOMYG00000012333 scxa (ENSOMYG00000012410) ENSOMYG00000075875 hgh1 (ENSOMYG00000012414) ENSOMYG00000012427 ENSOMYG00000012539 scrt1a (ENSOMYG00000012556) zgc:63863 (ENSOMYG00000056183) dgat1a (ENSOMYG00000012689) cfap20 (ENSOMYG00000061656) ENSOMYG00000013054 ENSOMYG00000013064 #19 SLC45A4 (ENSOMYG00000013075) #20 ENSOMYG00000056957 ENSOMYG00000013127 #21 ENSOMYG00000013627 #22 rplp1 (ENSOMYG00000014416) ENSOMYG00000014543 clptm1l (ENSOMYG00000014448) ENSOMYG00000076262 ENSOMYG00000014714 ENSOMYG00000015210 ENSOMYG00000015231 ENSOMYG00000075620 ENSOMYG00000048139 ENSOMYG00000052675 ENSOMYG00000034716 ENSOMYG00000034739 ENSOMYG00000034814 ENSOMYG00000035537 ENSOMYG00000038115 Salmo ANCESTRAL SPECIES 2 ENSGT00940000163549.h ENSGT00940000161897.b.a.c ENSGT00390000018422.e ENSGT00940000163790.b ENSGT00390000016546.j ENSGT00940000160387.d ENSGT00940000160042.d.a ENSGT00940000154491.c.a.b.c ENSGT00390000014944.b.c ENSGT00950000183081.b.i.b.e ENSGT00390000004554.m ENSGT00940000165466.d ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b.a #20 ENSGT00940000155784.C.u.b.d #21 ENSGT00940000155113.a.a.c.a #22 ENSGT00550000074698.c.a ENSGT00530000063461.A.b.a ENSGT00940000155549.a.a.a.b ENSGT00940000157893.c.b ENSGT00390000014398 ENSGT00550000074870.z ENSGT00910000144277.f.b.b ENSGT00990000212686 ENSGT00940000157751 ENSGT00940000156338.b.c ENSGT01090000260268.B ENSGT01060000251440 ENSGT00940000154450.tc.b ENSGT00940000158787.h.b ENSGT01090000260070.C.b.c River trout MODERN SPECIES 27 hsf1 (ENSSTUG00000043691) bop1 (ENSSTUG00000043797) scxa (ENSSTUG00000044441) ENSSTUG00000044447 hgh1 (ENSSTUG00000044451) ENSSTUG00000044469 ENSSTUG00000044595 scrt1a (ENSSTUG00000044612) zgc:63863 (ENSSTUG00000044624) dgat1a (ENSSTUG00000044716) cfap20 (ENSSTUG00000045602) ENSSTUG00000045628 ENSSTUG00000045659 #19 SLC45A4 (ENSSTUG00000045673) #20 DENND3 (ENSSTUG00000045698) #21 PTK2 (ENSSTUG00000046161) #22 rplp1 (ENSSTUG00000047603) clptm1l (ENSSTUG00000047613) CSMD3 (ENSSTUG00000047820) ENSSTUG00000049544 ENSSTUG00000049545 trps1 (ENSSTUG00000049546) ENSSTUG00000049547 wdyhv1 (ENSSTUG00000049549) ENSSTUG00000049554 sdha (ENSSTUG00000049562) ENSSTUG00000049646 KDM1B (ENSSTUG00000049671) ENSSTUG00000049820 ENSSTUG00000049824 srsf10b (ENSSTUG00000049827) Atlantic salmon MODERN SPECIES 19 bop1 (ENSSSAG00000021588) ENSSSAG00000023945 brp16 (ENSSSAG00000024112) ENSSSAG00000024550 ENSSSAG00000010796 ENSSSAG00000030027 ENSSSAG00000097421 scrt1a (ENSSSAG00000105690) zgc:63863 (ENSSSAG00000030357) dgat1a (ENSSSAG00000031001) cfap20 (ENSSSAG00000040578) ENSSSAG00000040608 ENSSSAG00000090489 #19 SLC45A4 (ENSSSAG00000040728) #20 dennd3 (ENSSSAG00000040784) #21 ENSSSAG00000041449 #22 ENSSSAG00000119383 rplp1 (ENSSSAG00000063156) clptm1l (ENSSSAG00000063184) ENSSSAG00000101872 ENSSSAG00000117801 ENSSSAG00000118533 ENSSSAG00000105504 ENSSSAG00000065020 ENSSSAG00000095756 ENSSSAG00000095425 PSA2 (ENSSSAG00000065065) sdha (ENSSSAG00000065157) ENSSSAG00000065391 ENSSSAG00000065417 ENSSSAG00000065537 Salmoninae ANCESTRAL SPECIES 780 ENSGT00970000197866 ENSGT00940000166193 ENSGT00950000182914.a.a.a.c.b.b #20 ENSGT00940000155784.C.u.b.c #21 ENSGT00940000155113.a.a.c.b #22 ENSGT00550000074698.c.b ENSGT00980000199189.d ENSGT00530000063461.A.b.b ENSGT00940000155549.a.a.a.a ENSGT00940000157893.c.a Huchen DUPLICATION Huchen MODERN SPECIES 6475 PTK2 (ENSHHUG00000001500) #22 Huchen DUPLICATION Huchen DUPLICATION Huchen MODERN SPECIES 5080 ENSHHUG00000050806 #22 ENSHHUG00000050805 #22 Huchen MODERN SPECIES 5080 ENSHHUG00000050806 #22 ENSHHUG00000050805 #22 Huchen MODERN SPECIES 1595 ENSHHUG00000033790 ENSHHUG00000033793 ENSHHUG00000033795 ENSHHUG00000033796 SLC45A4 (ENSHHUG00000033798) #20 DENND3 (ENSHHUG00000033856) #21 ENSHHUG00000033928 #22 Salmoninae_a ANCESTRAL SPECIES 5 ENSGT00940000161897.b.a.d ENSGT00390000018422.f ENSGT00940000163790.b ENSGT00940000163790.a ENSGT00390000016546.i ENSGT00940000160387.c ENSGT00940000160042.c ENSGT00940000160042.d.b ENSGT00940000154491.c.a.b.d ENSGT00390000014944.b.d ENSGT00950000183081.b.i.b.f ENSGT00390000004554.n ENSGT00940000166193 ENSGT00950000182914.a.a.a.c.b.b #20 ENSGT00940000155784.C.u.b.c #21 ENSGT00940000155113.a.a.c.b #22 ENSGT00550000074698.c.b ENSGT00980000199189.d ENSGT00530000063461.A.b.b ENSGT00940000155549.a.a.a.a ENSGT00940000157893.c.a ENSGT00990000213672 ENSGT00550000074870.y.b.b ENSGT00910000144277.f.b.a ENSGT00390000008818 ENSGT00940000164635 ENSGT00940000156215 #36 ENSGT00940000159300 #35 ENSGT00940000159104.d.d #34 ENSGT00940000158587.c.a #33 ENSGT00390000014274 Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00740000117011 ENSGT00940000163549.g ENSGT00940000161897.b.a.d ENSGT00390000018422.f ENSGT00940000163790.b ENSGT00940000163790.a ENSGT00390000016546.i ENSGT00940000160042.d.b ENSGT00940000154491.c.a.b.d ENSGT00390000014944.b.d ENSGT00950000183081.b.i.b.f ENSGT00390000004554.n ENSGT00940000166193 ENSGT00950000182914.a.a.a.c.b.b #20 ENSGT00940000155784.C.u.b.c #21 ENSGT00940000155113.a.a.c.b #22 ENSGT00550000074698.c.b ENSGT00980000199189.d ENSGT00530000063461.A.b.b ENSGT00940000155549.a.a.a.a ENSGT00940000157893.c.a ENSGT00990000213672 ENSGT00550000074870.y.b.b ENSGT00910000144277.f.b.a ENSGT00390000008818 ENSGT00940000164635 ENSGT00390000014274 ENSGT00940000156338.b.d ENSGT00940000159312.d ENSGT00940000164147.b ENSGT00940000154450.tc.a Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT01060000248801.d.b ENSGT00740000117011 ENSGT00940000163549.g ENSGT00940000161897.b.a.d ENSGT00390000018422.f ENSGT00940000163790.b ENSGT00390000016546.i ENSGT00940000160042.d.b ENSGT00940000154491.c.a.b.d ENSGT00390000014944.b.d ENSGT00950000183081.b.i.b.f ENSGT00390000004554.n ENSGT00940000166193 ENSGT00950000182914.a.a.a.c.b.b #20 ENSGT00940000155784.C.u.b.c #21 ENSGT00940000155113.a.a.c.b #22 ENSGT00550000074698.c.b ENSGT00980000199189.d ENSGT00530000063461.A.b.b ENSGT00940000155549.a.a.a.a ENSGT00940000157893.c.a ENSGT00550000074870.y.b.a.b ENSGT00910000144277.f.b.a ENSGT00390000014274 ENSGT00940000156338.b.d ENSGT00940000159312.d ENSGT00940000164147.b ENSGT00940000154450.tc.a ENSGT00990000212118 ENSGT00940000158787.h.a ENSGT01090000260070.C.b.d Chinook salmon MODERN SPECIES 24 ENSOTSG00005005679 ENSOTSG00005005681 hsf1 (ENSOTSG00005005683) bop1 (ENSOTSG00005005720) scxa (ENSOTSG00005005735) ENSOTSG00005005736 hgh1 (ENSOTSG00005005737) ENSOTSG00005005740 scrt1a (ENSOTSG00005005741) zgc:63863 (ENSOTSG00005005742) dgat1a (ENSOTSG00005005748) cfap20 (ENSOTSG00005005839) ENSOTSG00005005841 SLC45A4 (ENSOTSG00005005846) #20 ENSOTSG00005005849 #21 ENSOTSG00005005906 #22 rplp1 (ENSOTSG00005006091) ENSOTSG00005006092 clptm1l (ENSOTSG00005006095) CSMD3 (ENSOTSG00005006167) trps1 (ENSOTSG00005006357) ENSOTSG00005006358 sdha (ENSOTSG00005006359) ccdc127b (ENSOTSG00005006427) ENSOTSG00005006428 CFAP69 (ENSOTSG00005006429) slc9a1b (ENSOTSG00005006434) MAN1C1 (ENSOTSG00005006586) ENSOTSG00005006591 srsf10b (ENSOTSG00005006592) ENSOTSG00005006595 Coho salmon MODERN SPECIES 5 scxa (ENSOKIG00005008743) bop1 (ENSOKIG00005008679) ENSOKIG00005008660 ENSOKIG00005008648 hgh1 (ENSOKIG00005008592) ENSOKIG00005008584 ENSOKIG00005008552 scrt1a (ENSOKIG00005008533) ENSOKIG00005008524 zgc:63863 (ENSOKIG00005008440) dgat1a (ENSOKIG00005008229) cfap20 (ENSOKIG00005008188) ENSOKIG00005008078 SLC45A4 (ENSOKIG00005008063) #20 DENND3 (ENSOKIG00005007768) #21 PTK2 (ENSOKIG00005007332) #22 rplp1 (ENSOKIG00005007285) ENSOKIG00005007274 clptm1l (ENSOKIG00005006551) ENSOKIG00005006510 CSMD3 (ENSOKIG00005005950) ENSOKIG00005005840 trps1 (ENSOKIG00005005834) ENSOKIG00005005805 sdha (ENSOKIG00005005662) ccdc127b (ENSOKIG00005005635) ENSOKIG00005005629 CFAP69 (ENSOKIG00005005523) slc9a1b (ENSOKIG00005004498) MAN1C1 (ENSOKIG00005022347) ENSOKIG00005022330 Rainbow trout MODERN SPECIES 24 ENSOMYG00000073896 scxa (ENSOMYG00000017606) ENSOMYG00000053659 ENSOMYG00000017617 hgh1 (ENSOMYG00000017633) ENSOMYG00000075876 ENSOMYG00000017657 scrt1a (ENSOMYG00000065678) zgc:63863 (ENSOMYG00000049871) ENSOMYG00000068502 dgat1a (ENSOMYG00000017758) cfap20 (ENSOMYG00000018743) ENSOMYG00000018784 ENSOMYG00000018864 #20 ENSOMYG00000018981 #21 ENSOMYG00000019685 #22 rplp1 (ENSOMYG00000021164) ENSOMYG00000021170 ENSOMYG00000074552 clptm1l (ENSOMYG00000021358) ENSOMYG00000004197 ENSOMYG00000050767 ENSOMYG00000005216 ENSOMYG00000063231 ENSOMYG00000056482 ENSOMYG00000005230 ENSOMYG00000005522 ENSOMYG00000000281 ENSOMYG00000006505 ENSOMYG00000006584 slc9a1b (ENSOMYG00000007199) Salmo ANCESTRAL SPECIES 2 ENSGT00940000163549.g ENSGT00940000161897.b.a.d ENSGT00390000018422.f ENSGT00940000163790.a ENSGT00390000016546.i ENSGT00940000160387.c ENSGT00940000160042.c ENSGT00940000160042.d.b ENSGT00940000154491.c.a.b.d ENSGT00390000014944.b.d ENSGT00950000183081.b.i.b.f ENSGT00390000004554.n ENSGT00940000166193 ENSGT00950000182914.a.a.a.c.b.b #20 ENSGT00940000155784.C.u.b.c #21 ENSGT00940000155113.a.a.c.b #22 ENSGT00550000074698.c.b ENSGT00980000199189.d ENSGT00530000063461.A.b.b ENSGT00940000155549.a.a.a.a ENSGT00940000157893.c.a ENSGT00990000213672 ENSGT00550000074870.y.b.b ENSGT00910000144277.f.b.a ENSGT00390000014274 ENSGT00940000156338.b.d ENSGT00940000159312.d ENSGT00940000164147.b ENSGT00940000154450.tc.a ENSGT00990000212118 ENSGT00940000158787.h.a Atlantic salmon MODERN SPECIES 5 bop1 (ENSSSAG00000047288) ENSSSAG00000047261 hgh1 (ENSSSAG00000047259) ENSSSAG00000047602 ENSSSAG00000047250 scrt1a (ENSSSAG00000092655) ENSSSAG00000121008 zgc:63863 (ENSSSAG00000047196) dgat1a (ENSSSAG00000047100) cfap20 (ENSSSAG00000047067) ENSSSAG00000046974 ENSSSAG00000046960 #20 ENSSSAG00000104635 ENSSSAG00000046861 #21 ENSSSAG00000102250 ENSSSAG00000044281 #22 ENSSSAG00000044191 ENSSSAG00000044178 clptm1l (ENSSSAG00000043766) ENSSSAG00000109734 ENSSSAG00000090735 ENSSSAG00000038648 ENSSSAG00000084152 ENSSSAG00000109998 ENSSSAG00000029270 ENSSSAG00000029022 PSA2 (ENSSSAG00000026601) ENSSSAG00000020652 ccdc127 (ENSSSAG00000020001) ENSSSAG00000018117 slc9a1b (ENSSSAG00000017046) River trout MODERN SPECIES 29 ENSSTUG00000047750 hsf1 (ENSSTUG00000047759) bop1 (ENSSTUG00000047856) scxa (ENSSTUG00000047891) ENSSTUG00000047895 hgh1 (ENSSTUG00000047903) ENSSTUG00000047907 slc39a4 (ENSSTUG00000047919) scrt1a (ENSSTUG00000047928) zgc:63863 (ENSSTUG00000047934) dgat1a (ENSSTUG00000047985) cfap20 (ENSSTUG00000048157) ENSSTUG00000048167 SLC45A4 (ENSSTUG00000048200) #20 DENND3 (ENSSTUG00000048214) #21 PTK2 (ENSSTUG00000048354) #22 rplp1 (ENSSTUG00000048731) ENSSTUG00000048735 clptm1l (ENSSTUG00000048744) CSMD3 (ENSSTUG00000048969) ENSSTUG00000037753 trps1 (ENSSTUG00000037773) ENSSTUG00000037783 ENSSTUG00000037835 sdha (ENSSTUG00000037969) ccdc127b (ENSSTUG00000038676) CFAP69 (ENSSTUG00000038689) slc9a1b (ENSSTUG00000038794) MAN1C1 (ENSSTUG00000039533) ENSSTUG00000039655 srsf10b (ENSSTUG00000039664) Salmoninae ANCESTRAL SPECIES 1454 ENSGT00970000197016.b ENSGT00940000155113.a.a.d #22 ENSGT00970000197016.a Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155113.a.a.d #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000155113.a.a.d #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000155113.a.a.d #22 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 1035 ENSOTSG00005039982 #22 ENSOTSG00005039983 ##22 ENSOTSG00005039990 Chinook salmon MODERN SPECIES 147 ENSOTSG00005028931 #22 ENSOTSG00005028930 Huchen DUPLICATION Huchen MODERN SPECIES 3790 ENSHHUG00000042513 ENSHHUG00000042503 #22 rplp1 (ENSHHUG00000042499) clptm1l (ENSHHUG00000042413) ENSHHUG00000042397 Huchen MODERN SPECIES 6838 ENSHHUG00000006029 ##22 ENSHHUG00000006027 #22 Huchen MODERN SPECIES 8049 ENSHHUG00000023282 #22 ENSHHUG00000023277 Acanthomorphata ANCESTRAL SPECIES 22 ENSGT00730000110871.a.a.a.a ENSGT00730000110871.b ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Cod MODERN SPECIES 14 ENSGMOG00000011366 ENSGMOG00000011329 ENSGMOG00000027353 ENSGMOG00000001186 ENSGMOG00000023867 ENSGMOG00000001340 ENSGMOG00000029940 ENSGMOG00000013833 zgc:63863 (ENSGMOG00000009822) ENSGMOG00000036473 dgat1a (ENSGMOG00000016836) cfap20 (ENSGMOG00000016832) ENSGMOG00000029829 #19 ENSGMOG00000034931 #20 ENSGMOG00000016795 #21 ENSGMOG00000022786 #22 ENSGMOG00000031213 ENSGMOG00000003124 ENSGMOG00000007072 ENSGMOG00000002786 ENSGMOG00000029802 ENSGMOG00000035253 ENSGMOG00000023748 ENSGMOG00000002665 ENSGMOG00000002645 ENSGMOG00000002639 ENSGMOG00000002589 ENSGMOG00000002565 ENSGMOG00000002532 ENSGMOG00000002519 ENSGMOG00000002496 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00730000110871.a.a.a.a ENSGT00730000110871.b ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Pinecone sodierfish MODERN SPECIES 2 cyp51 (ENSMMDG00005002249) ENSMMDG00005002335 ENSMMDG00005002340 MTERF1 (ENSMMDG00005002342) dus3l (ENSMMDG00005002348) ENSMMDG00005002398 cndp2 (ENSMMDG00005002406) RECQL4 (ENSMMDG00005002687) ENSMMDG00005002714 SCRT1 (ENSMMDG00005002733) zgc:63863 (ENSMMDG00005002744) dgat1a (ENSMMDG00005002759) cfap20 (ENSMMDG00005002784) SLC45A4 (ENSMMDG00005002814) #20 DENND3 (ENSMMDG00005002895) #21 PTK2 (ENSMMDG00005003089) #22 rplp1 (ENSMMDG00005003107) clptm1l (ENSMMDG00005003160) trps1 (ENSMMDG00005003403) CSMD3 (ENSMMDG00005003424) tshz1 (ENSMMDG00005004041) znf516 (ENSMMDG00005004049) ENSMMDG00005004053 SYNGAP1 (ENSMMDG00005004075) vps72a (ENSMMDG00005004101) lingo4a (ENSMMDG00005004108) ctss1 (ENSMMDG00005004164) ENSMMDG00005005316 SV2A (ENSMMDG00005005325) sf3b4 (ENSMMDG00005005330) LIX1L (ENSMMDG00005005334) Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00730000110871.a.a.a.a ENSGT00730000110871.b ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Tiger tail seahorse MODERN SPECIES 99 ENSHCOG00000016279 dgat1a (ENSHCOG00000016223) zgc:63863 (ENSHCOG00000016208) SCRT1 (ENSHCOG00000016179) ENSHCOG00000016163 RECQL4 (ENSHCOG00000016157) cndp2 (ENSHCOG00000016143) ENSHCOG00000016129 dus3l (ENSHCOG00000016072) MTERF1 (ENSHCOG00000016064) ENSHCOG00000016056 cyp51 (ENSHCOG00000015902) krit1 (ENSHCOG00000015896) rpz2 (ENSHCOG00000000442) si:dkey-266f7.9 (ENSHCOG00000015848) PTK2 (ENSHCOG00000015835) #22 rplp1 (ENSHCOG00000015713) clptm1l (ENSHCOG00000015698) trps1 (ENSHCOG00000015687) ENSHCOG00000015654 ENSHCOG00000015638 ENSHCOG00000015631 ENSHCOG00000015615 ENSHCOG00000015574 tshz1 (ENSHCOG00000015516) DNAH17 (ENSHCOG00000015509) ENSHCOG00000015351 ENSHCOG00000015339 ENSHCOG00000015331 maff (ENSHCOG00000000426) tomm22 (ENSHCOG00000015307) Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Ovalentaria ANCESTRAL SPECIES 12 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Oryzias DUPLICATION Oryzias ANCESTRAL SPECIES ENSGT00940000155113.a.a.e #22 Oryzias_a ANCESTRAL SPECIES ENSGT00940000155113.a.a.e #22 Chinese medaka MODERN SPECIES 5199 ENSOSIG00000004049 #22 Oryzias ANCESTRAL SPECIES 24 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000178701 ENSGT00530000063461.A.b ENSGT00950000182914.a.a.a.d #20 ENSGT00940000155784.C.v #21 ENSGT00940000155113.a.a.f #22 ENSGT00970000197016 Oryzias_a ANCESTRAL SPECIES ENSGT00940000155113.a.a.f #22 Chinese medaka MODERN SPECIES 2947 ENSOSIG00000003138 #22 Oryzias_b ANCESTRAL SPECIES 31 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00530000063461.A.b ENSGT00950000182914.a.a.a.d #20 ENSGT00940000155784.C.v #21 ENSGT00940000155113.a.a.f #22 ENSGT00970000197016 Javanese ricefish MODERN SPECIES 2 prcc (ENSOJAG00000003176) mrpl9 (ENSOJAG00000003161) si:dkey-266f7.9 (ENSOJAG00000003158) rpz2 (ENSOJAG00000003151) cyp51 (ENSOJAG00000002990) ENSOJAG00000002903 MTERF1 (ENSOJAG00000002892) dus3l (ENSOJAG00000002869) ENSOJAG00000002710 SCRT1 (ENSOJAG00000002702) zgc:63863 (ENSOJAG00000002688) cfap20 (ENSOJAG00000002594) GPR20 (ENSOJAG00000002588) #19 ENSOJAG00000002574 #20 ENSOJAG00000002570 #21 PTK2 (ENSOJAG00000002123) #22 ENSOJAG00000002025 tmem79a (ENSOJAG00000001928) ENSOJAG00000001917 znf687b (ENSOJAG00000001900) psmd4a (ENSOJAG00000001863) ENSOJAG00000001849 ENSOJAG00000001838 ndufv1 (ENSOJAG00000001689) ENSOJAG00000001647 aqp10b (ENSOJAG00000007966) hax1 (ENSOJAG00000007932) ubap2l (ENSOJAG00000006692) C1orf43 (ENSOJAG00000006537) ENSOJAG00000006375 s100s (ENSOJAG00000006354) Indian medaka DUPLICATION Indian medaka MODERN SPECIES 221 ENSOMEG00000000286 zgc:63863 (ENSOMEG00000011907) dgat1a (ENSOMEG00000011981) cfap20 (ENSOMEG00000012030) GPR20 (ENSOMEG00000012061) #19 SLC45A4 (ENSOMEG00000012086) #20 DENND3 (ENSOMEG00000012121) #21 ENSOMEG00000012130 ENSOMEG00000012139 #22 ENSOMEG00000012150 ENSOMEG00000012164 #22 ENSOMEG00000012182 clptm1l (ENSOMEG00000000310) Indian medaka MODERN SPECIES 221 ENSOMEG00000000286 zgc:63863 (ENSOMEG00000011907) dgat1a (ENSOMEG00000011981) cfap20 (ENSOMEG00000012030) GPR20 (ENSOMEG00000012061) #19 SLC45A4 (ENSOMEG00000012086) #20 DENND3 (ENSOMEG00000012121) #21 ENSOMEG00000012130 ENSOMEG00000012139 #22 ENSOMEG00000012150 ENSOMEG00000012164 #22 ENSOMEG00000012182 clptm1l (ENSOMEG00000000310) Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a ENSGT00940000160311.a.b ENSGT01090000260040.b.b.a.c.a Turquoise killifish MODERN SPECIES 1628 MTERF1 (ENSNFUG00015022166) dus3l (ENSNFUG00015021851) ENSNFUG00015021838 cndp2 (ENSNFUG00015021804) RECQL4 (ENSNFUG00015021784) SLC39A4 (ENSNFUG00015021780) ENSNFUG00015021778 SCRT1 (ENSNFUG00015021772) Nfu_g_1_004128 (ENSNFUG00015021764) DGAT1A (ENSNFUG00015021711) ENSNFUG00015021704 ENSNFUG00015021692 #19 SLC45A4 (ENSNFUG00015021684) #20 DENND3 (ENSNFUG00015021646) #21 ENSNFUG00015021639 PTK2 (ENSNFUG00015020854) #22 cks1b (ENSNFUG00015020789) EFNA3A (ENSNFUG00015020786) efna1a (ENSNFUG00015020784) dpm3 (ENSNFUG00015020781) trim46b (ENSNFUG00015020774) ENSNFUG00015020771 S100A2 (ENSNFUG00015020767) SNX27A (ENSNFUG00015020015) Nfu_g_1_017837 (ENSNFUG00015019925) ENSNFUG00015019877 ENSNFUG00015019823 cers2a (ENSNFUG00015019804) celf3a (ENSNFUG00015019695) RPRD2A (ENSNFUG00015019643) C19H1ORF51 (ENSNFUG00015019628) Mangrove rivulus MODERN SPECIES 2 ENSKMAG00000009757 MTERF1 (ENSKMAG00000009695) dus3l (ENSKMAG00000009675) ENSKMAG00000009653 cndp2 (ENSKMAG00000009618) ENSKMAG00000009537 ENSKMAG00000009503 ENSKMAG00000009489 KLHL10 (ENSKMAG00000009467) zgc:63863 (ENSKMAG00000009431) dgat1a (ENSKMAG00000009340) cfap20 (ENSKMAG00000009297) cfap20 (ENSKMAG00000009263) SLC45A4 (ENSKMAG00000009242) #20 DENND3 (ENSKMAG00000009201) #21 PTK2 (ENSKMAG00000009027) #22 rplp1 (ENSKMAG00000008998) clptm1l (ENSKMAG00000008913) trps1 (ENSKMAG00000008869) CSMD3 (ENSKMAG00000008620) tshz1 (ENSKMAG00000008580) ENSKMAG00000008571 SYNGAP1 (ENSKMAG00000008440) vps72a (ENSKMAG00000008394) lingo4a (ENSKMAG00000008371) ENSKMAG00000008316 ctss1 (ENSKMAG00000008257) SV2A (ENSKMAG00000008186) sf3b4 (ENSKMAG00000008154) LIX1L (ENSKMAG00000008131) pabpc1b (ENSKMAG00000008049) Cyprinodontoidei ANCESTRAL SPECIES 11 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500.j ENSGT00940000156500.i ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a NAME_4 ANCESTRAL SPECIES 10 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500.j ENSGT00940000156500.i ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Sheepshead minnow MODERN SPECIES 715 ENSCVAG00000003230 SCRT1 (ENSCVAG00000003190) zgc:63863 (ENSCVAG00000003183) dgat1a (ENSCVAG00000003163) cfap20 (ENSCVAG00000003148) SLC45A4 (ENSCVAG00000003130) #20 DENND3 (ENSCVAG00000003077) #21 PTK2 (ENSCVAG00000003044) #22 rplp1 (ENSCVAG00000002940) clptm1l (ENSCVAG00000002933) Mummichog MODERN SPECIES 2348 MTERF1 (ENSFHEG00000000224) dus3l (ENSFHEG00000010091) ENSFHEG00000010012 cndp2 (ENSFHEG00000010005) cndp2 (ENSFHEG00000009872) RECQL4 (ENSFHEG00000009855) slc39a4 (ENSFHEG00000009832) SCRT1 (ENSFHEG00000009794) zgc:63863 (ENSFHEG00000009773) dgat1a (ENSFHEG00000009713) cfap20 (ENSFHEG00000009610) GPR20 (ENSFHEG00000009588) #19 SLC45A4 (ENSFHEG00000009569) #20 ENSFHEG00000009492 #21 DENND3 (ENSFHEG00000000219) #21 PTK2 (ENSFHEG00000009427) #22 rplp1 (ENSFHEG00000008862) clptm1l (ENSFHEG00000008826) trps1 (ENSFHEG00000008678) CSMD3 (ENSFHEG00000008655) tshz1 (ENSFHEG00000008423) znf516 (ENSFHEG00000008408) ENSFHEG00000008394 ENSFHEG00000008377 vps72a (ENSFHEG00000008307) ENSFHEG00000008289 ctss1 (ENSFHEG00000008270) ENSFHEG00000008248 SV2A (ENSFHEG00000008239) sf3b4 (ENSFHEG00000008211) ENSFHEG00000008168 Poeciliinae ANCESTRAL SPECIES 18 ENSGT00930000151026 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000156500.j ENSGT00940000156500.i ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Platyfish MODERN SPECIES 4 cyp51 (ENSXMAG00000015173) ENSXMAG00000015218 ENSXMAG00000029166 ENSXMAG00000029672 dus3l (ENSXMAG00000015252) cndp2 (ENSXMAG00000015266) ENSXMAG00000015315 ENSXMAG00000015339 SCRT1 (ENSXMAG00000015353) zgc:63863 (ENSXMAG00000015355) dgat1a (ENSXMAG00000015366) cfap20 (ENSXMAG00000015399) GPR20 (ENSXMAG00000015403) #19 SLC45A4 (ENSXMAG00000015412) #20 DENND3 (ENSXMAG00000015472) #21 PTK2 (ENSXMAG00000015476) #22 rplp1 (ENSXMAG00000015532) clptm1l (ENSXMAG00000015553) trps1 (ENSXMAG00000015559) CSMD3 (ENSXMAG00000015566) tshz1 (ENSXMAG00000023230) znf516 (ENSXMAG00000028251) ENSXMAG00000015639 SYNGAP1 (ENSXMAG00000003807) vps72a (ENSXMAG00000003802) lingo4a (ENSXMAG00000020336) ctss1 (ENSXMAG00000003801) ENSXMAG00000003793 SV2A (ENSXMAG00000003782) sf3b4 (ENSXMAG00000003772) LIX1L (ENSXMAG00000003769) Poecilia ANCESTRAL SPECIES 24 ENSGT00930000151026 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000156500.j ENSGT00940000156500.i ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a ENSGT00760000119766 Guppy MODERN SPECIES 441 ENSPREG00000012377 MTERF1 (ENSPREG00000012369) dus3l (ENSPREG00000012315) cndp2 (ENSPREG00000012281) cndp2 (ENSPREG00000012256) ENSPREG00000012196 slc39a4 (ENSPREG00000012173) ENSPREG00000012166 ENSPREG00000012153 zgc:63863 (ENSPREG00000012136) dgat1a (ENSPREG00000012064) cfap20 (ENSPREG00000012033) ENSPREG00000012010 #19 SLC45A4 (ENSPREG00000011989) #20 DENND3 (ENSPREG00000011896) #21 PTK2 (ENSPREG00000011683) #22 rplp1 (ENSPREG00000011579) clptm1l (ENSPREG00000011507) trps1 (ENSPREG00000011468) CSMD3 (ENSPREG00000011344) tshz1 (ENSPREG00000011305) znf516 (ENSPREG00000011296) ENSPREG00000011286 SYNGAP1 (ENSPREG00000011216) vps72a (ENSPREG00000011189) lingo4a (ENSPREG00000011184) ctss1 (ENSPREG00000011168) SV2A (ENSPREG00000011109) sf3b4 (ENSPREG00000011076) lix1l (ENSPREG00000011018) ENSPREG00000010984 NAME_6 ANCESTRAL SPECIES 171 ENSGT00530000063721.A ENSGT00930000151026 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000156500.j ENSGT00940000156500.i ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 Amazon molly MODERN SPECIES 419 krit1 (ENSPFOG00000007240) cyp51 (ENSPFOG00000007109) ENSPFOG00000006927 MTERF1 (ENSPFOG00000006919) dus3l (ENSPFOG00000006750) cndp2 (ENSPFOG00000006653) cndp2 (ENSPFOG00000006107) ENSPFOG00000005814 ENSPFOG00000005641 SCRT1 (ENSPFOG00000005616) zgc:63863 (ENSPFOG00000005444) dgat1a (ENSPFOG00000005252) cfap20 (ENSPFOG00000005171) SLC45A4 (ENSPFOG00000004858) #20 DENND3 (ENSPFOG00000004408) #21 PTK2 (ENSPFOG00000003397) #22 rplp1 (ENSPFOG00000003310) clptm1l (ENSPFOG00000003009) trps1 (ENSPFOG00000002852) ENSPFOG00000002808 Sailfin molly DUPLICATION Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 49 ENSPLAG00000011562 MTERF1 (ENSPLAG00000011584) dus3l (ENSPLAG00000011636) cndp2 (ENSPLAG00000011675) cndp2 (ENSPLAG00000011693) ENSPLAG00000011704 ENSPLAG00000011708 SCRT1 (ENSPLAG00000011718) zgc:63863 (ENSPLAG00000011723) dgat1a (ENSPLAG00000011729) cfap20 (ENSPLAG00000011743) SLC45A4 (ENSPLAG00000011749) #20 ENSPLAG00000011758 #21 ENSPLAG00000011768 ENSPLAG00000011795 #22 ENSPLAG00000011819 #22 Sailfin molly MODERN SPECIES 49 cyp51 (ENSPLAG00000011514) ENSPLAG00000011562 MTERF1 (ENSPLAG00000011584) dus3l (ENSPLAG00000011636) cndp2 (ENSPLAG00000011675) cndp2 (ENSPLAG00000011693) ENSPLAG00000011704 ENSPLAG00000011708 SCRT1 (ENSPLAG00000011718) zgc:63863 (ENSPLAG00000011723) dgat1a (ENSPLAG00000011729) cfap20 (ENSPLAG00000011743) SLC45A4 (ENSPLAG00000011749) #20 ENSPLAG00000011758 #21 ENSPLAG00000011768 ENSPLAG00000011795 #22 ENSPLAG00000011819 #22 Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 44 ENSPLAG00000013308 #22 ENSPLAG00000013321 #22 rplp1 (ENSPLAG00000013328) clptm1l (ENSPLAG00000013403) trps1 (ENSPLAG00000013413) Sailfin molly MODERN SPECIES 44 ENSPLAG00000013308 #22 ENSPLAG00000013321 #22 rplp1 (ENSPLAG00000013328) clptm1l (ENSPLAG00000013403) trps1 (ENSPLAG00000013413) Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Pomacentridae ANCESTRAL SPECIES 7 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Bicolor damselfish MODERN SPECIES 1074 DENND3 (ENSSPAG00000001255) #21 PTK2 (ENSSPAG00000001317) #22 rplp1 (ENSSPAG00000001515) clptm1l (ENSSPAG00000001520) Pomacentridae_A ANCESTRAL SPECIES 99 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c.j ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554.r ENSGT00390000004554.q ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a Amphiprion ANCESTRAL SPECIES 186 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c.j ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554.r ENSGT00390000004554.q ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a Orange clownfish MODERN SPECIES 8 MTERF1 (ENSAPEG00000005877) dus3l (ENSAPEG00000005828) ENSAPEG00000005796 cndp2 (ENSAPEG00000005779) ENSAPEG00000005709 ENSAPEG00000005691 SCRT1 (ENSAPEG00000005677) KLHL10 (ENSAPEG00000005598) zgc:63863 (ENSAPEG00000005579) dgat1a (ENSAPEG00000005517) cfap20 (ENSAPEG00000005503) cfap20 (ENSAPEG00000005472) GPR20 (ENSAPEG00000005428) #19 SLC45A4 (ENSAPEG00000005346) #20 DENND3 (ENSAPEG00000005252) #21 PTK2 (ENSAPEG00000005023) #22 rplp1 (ENSAPEG00000004985) clptm1l (ENSAPEG00000004913) trps1 (ENSAPEG00000004813) CSMD3 (ENSAPEG00000004568) tshz1 (ENSAPEG00000004494) ENSAPEG00000004484 ENSAPEG00000004472 ENSAPEG00000004455 ddah2 (ENSAPEG00000004429) ENSAPEG00000004411 clic1 (ENSAPEG00000004376) ENSAPEG00000004363 ENSAPEG00000004344 CSNK2B (ENSAPEG00000004320) prrc2a (ENSAPEG00000004231) Clown anemonefish MODERN SPECIES 737 SCRT1 (ENSAOCG00000023304) KLHL10 (ENSAOCG00000023298) zgc:63863 (ENSAOCG00000023288) dgat1a (ENSAOCG00000023266) cfap20 (ENSAOCG00000023222) cfap20 (ENSAOCG00000023200) GPR20 (ENSAOCG00000023178) #19 SLC45A4 (ENSAOCG00000023156) #20 DENND3 (ENSAOCG00000023131) #21 PTK2 (ENSAOCG00000023071) #22 Spiny chromis MODERN SPECIES 379 ENSAPOG00000015175 SCRT1 (ENSAPOG00000015197) KLHL10 (ENSAPOG00000015217) zgc:63863 (ENSAPOG00000015224) dgat1a (ENSAPOG00000015313) cfap20 (ENSAPOG00000015348) cfap20 (ENSAPOG00000015367) GPR20 (ENSAPOG00000015397) #19 SLC45A4 (ENSAPOG00000015411) #20 DENND3 (ENSAPOG00000015424) #21 PTK2 (ENSAPOG00000015508) #22 rplp1 (ENSAPOG00000015519) clptm1l (ENSAPOG00000015592) Cichlidae ANCESTRAL SPECIES 7 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Midas cichlid MODERN SPECIES 1307 PTK2 (ENSACIG00000018814) #22 ENSACIG00000018806 clptm1l (ENSACIG00000018782) trps1 (ENSACIG00000018741) ENSACIG00000018731 ENSACIG00000018718 CSMD3 (ENSACIG00000018627) tshz1 (ENSACIG00000018602) ENSACIG00000018594 SYNGAP1 (ENSACIG00000018557) vps72a (ENSACIG00000018543) lingo4a (ENSACIG00000018535) ENSACIG00000018515 ENSACIG00000018495 SV2A (ENSACIG00000018471) sf3b4 (ENSACIG00000018455) Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00940000163253.a.a.b ENSGT00940000156500.g ENSGT00940000156500.h.a ENSGT00940000156500.h.b ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c.e ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Nile tilapia MODERN SPECIES 13 cndp2 (ENSONIG00000036243) RECQL4 (ENSONIG00000019801) ENSONIG00000019806 ENSONIG00000031414 SCRT1 (ENSONIG00000019809) ENSONIG00000037409 ENSONIG00000042862 ENSONIG00000030309 ENSONIG00000038713 zgc:63863 (ENSONIG00000002857) dgat1a (ENSONIG00000002849) cfap20 (ENSONIG00000002845) GPR20 (ENSONIG00000037263) #19 SLC45A4 (ENSONIG00000002838) #20 DENND3 (ENSONIG00000002833) #21 PTK2 (ENSONIG00000002815) #22 rplp1 (ENSONIG00000002814) clptm1l (ENSONIG00000002800) trps1 (ENSONIG00000038056) CSMD3 (ENSONIG00000002776) tshz1 (ENSONIG00000002775) znf516 (ENSONIG00000030464) ENSONIG00000020851 SYNGAP1 (ENSONIG00000002773) ENSONIG00000002770 vps72a (ENSONIG00000002771) lingo4a (ENSONIG00000020850) ENSONIG00000002754 SV2A (ENSONIG00000002737) sf3b4 (ENSONIG00000002730) LIX1L (ENSONIG00000002728) Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500.g ENSGT00940000156500.h.a ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c.e ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Haplochromini ANCESTRAL SPECIES 5 ENSGT00940000156500.g ENSGT00940000156500.h.a.b.a.a ENSGT00940000156500.h.b ENSGT00940000156500.h.a.a ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c.e ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00940000156500.h.b ENSGT01100000263483.E.a.c.a.b.a.b ENSGT00940000156500.h.a.b.a.b.b ENSGT00940000156500.h.a.a ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c.e.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a P. nyererei DUPLICATION P. nyererei DUPLICATION P. nyererei MODERN SPECIES 323 ENSPNYG00000013308 ENSPNYG00000013293 #22 ENSPNYG00000013275 #22 ENSPNYG00000013260 #22 rplp1 (ENSPNYG00000013249) clptm1l (ENSPNYG00000013208) ENSPNYG00000013173 ENSPNYG00000013159 CSMD3 (ENSPNYG00000013030) tshz1 (ENSPNYG00000012989) znf516 (ENSPNYG00000012972) ENSPNYG00000012965 SYNGAP1 (ENSPNYG00000012872) vps72a (ENSPNYG00000012841) ENSPNYG00000012824 ENSPNYG00000012786 ENSPNYG00000012762 P. nyererei MODERN SPECIES 323 ENSPNYG00000013308 ENSPNYG00000013293 #22 ENSPNYG00000013275 #22 ENSPNYG00000013260 #22 rplp1 (ENSPNYG00000013249) clptm1l (ENSPNYG00000013208) ENSPNYG00000013173 ENSPNYG00000013159 CSMD3 (ENSPNYG00000013030) tshz1 (ENSPNYG00000012989) znf516 (ENSPNYG00000012972) ENSPNYG00000012965 SYNGAP1 (ENSPNYG00000012872) vps72a (ENSPNYG00000012841) ENSPNYG00000012824 ENSPNYG00000012786 ENSPNYG00000012762 SV2A (ENSPNYG00000012723) sf3b4 (ENSPNYG00000012700) P. nyererei MODERN SPECIES 323 ENSPNYG00000013308 ENSPNYG00000013293 #22 ENSPNYG00000013275 #22 ENSPNYG00000013260 #22 rplp1 (ENSPNYG00000013249) clptm1l (ENSPNYG00000013208) ENSPNYG00000013173 ENSPNYG00000013159 CSMD3 (ENSPNYG00000013030) tshz1 (ENSPNYG00000012989) znf516 (ENSPNYG00000012972) ENSPNYG00000012965 SYNGAP1 (ENSPNYG00000012872) vps72a (ENSPNYG00000012841) ENSPNYG00000012824 ENSPNYG00000012786 ENSPNYG00000012762 SV2A (ENSPNYG00000012723) Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00940000156500.g ENSGT00940000156500.h.a.b.a.a ENSGT00940000156500.h.b ENSGT01100000263483.E.a.c.a.b.a.b ENSGT00940000156500.h.a.a ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c.e.c.a.a ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a ENSGT00760000119766 Zebra mbuna MODERN SPECIES 1104 cndp2 (ENSMZEG00005026671) cndp2 (ENSMZEG00005026679) ENSMZEG00005026691 cndp2 (ENSMZEG00005026696) RECQL4 (ENSMZEG00005026699) ENSMZEG00005026701 ENSMZEG00005026702 KLHL10 (ENSMZEG00005026703) KLHL10 (ENSMZEG00005026704) zgc:63863 (ENSMZEG00005026705) dgat1a (ENSMZEG00005026706) cfap20 (ENSMZEG00005026708) ENSMZEG00005026709 #19 SLC45A4 (ENSMZEG00005026711) #20 DENND3 (ENSMZEG00005026714) #21 PTK2 (ENSMZEG00005026719) #22 rplp1 (ENSMZEG00005026720) clptm1l (ENSMZEG00005026722) trps1 (ENSMZEG00005026723) CSMD3 (ENSMZEG00005026724) tshz1 (ENSMZEG00005026725) ENSMZEG00005026726 znf516 (ENSMZEG00005026727) ENSMZEG00005026728 ENSMZEG00005026729 vps72a (ENSMZEG00005026730) lingo4a (ENSMZEG00005026731) ENSMZEG00005026732 ENSMZEG00005026735 SV2A (ENSMZEG00005026738) sf3b4 (ENSMZEG00005026741) Eastern happy MODERN SPECIES 13 cndp2 (ENSACLG00000011738) cndp2 (ENSACLG00000011770) ENSACLG00000011804 cndp2 (ENSACLG00000011810) ENSACLG00000011982 ENSACLG00000012028 SCRT1 (ENSACLG00000012046) KLHL10 (ENSACLG00000012065) KLHL10 (ENSACLG00000012119) zgc:63863 (ENSACLG00000012165) dgat1a (ENSACLG00000012220) cfap20 (ENSACLG00000012271) ENSACLG00000012293 #19 SLC45A4 (ENSACLG00000012397) #20 DENND3 (ENSACLG00000012420) #21 PTK2 (ENSACLG00000012512) #22 rplp1 (ENSACLG00000012690) clptm1l (ENSACLG00000012698) trps1 (ENSACLG00000013131) ENSACLG00000013155 CSMD3 (ENSACLG00000013677) tshz1 (ENSACLG00000013882) znf516 (ENSACLG00000013902) ENSACLG00000013930 SYNGAP1 (ENSACLG00000013965) vps72a (ENSACLG00000014023) ctss1 (ENSACLG00000014073) lingo4a (ENSACLG00000014091) ENSACLG00000014098 SV2A (ENSACLG00000014186) sf3b4 (ENSACLG00000014260) Burton s mouthbrooder MODERN SPECIES 288 PTK2 (ENSHBUG00000023488) #22 rplp1 (ENSHBUG00000023496) clptm1l (ENSHBUG00000023587) trps1 (ENSHBUG00000023601) CSMD3 (ENSHBUG00000023828) tshz1 (ENSHBUG00000023837) znf516 (ENSHBUG00000001908) ENSHBUG00000001913 ENSHBUG00000001931 vps72a (ENSHBUG00000001951) lingo4a (ENSHBUG00000001961) ENSHBUG00000001976 ENSHBUG00000001992 SV2A (ENSHBUG00000002013) sf3b4 (ENSHBUG00000002028) LIX1L (ENSHBUG00000000954) Lyretail cichlid DUPLICATION Lyretail cichlid DUPLICATION Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 302 ENSNBRG00000014962 cndp2 (ENSNBRG00000014933) slc39a4 (ENSNBRG00000014915) ENSNBRG00000014895 SCRT1 (ENSNBRG00000014882) KLHL10 (ENSNBRG00000014863) zgc:63863 (ENSNBRG00000014838) dgat1a (ENSNBRG00000014736) cfap20 (ENSNBRG00000014678) GPR20 (ENSNBRG00000014662) #19 SLC45A4 (ENSNBRG00000014628) #20 ENSNBRG00000014566 #21 ENSNBRG00000014525 #22 ENSNBRG00000014497 #22 ENSNBRG00000014483 ENSNBRG00000014464 #22 rplp1 (ENSNBRG00000014452) clptm1l (ENSNBRG00000014408) trps1 (ENSNBRG00000014352) CSMD3 (ENSNBRG00000014186) tshz1 (ENSNBRG00000014165) znf516 (ENSNBRG00000014157) ENSNBRG00000014140 SYNGAP1 (ENSNBRG00000014033) vps72a (ENSNBRG00000014002) lingo4a (ENSNBRG00000013990) ENSNBRG00000013953 ENSNBRG00000013925 SV2A (ENSNBRG00000013892) sf3b4 (ENSNBRG00000013865) LIX1L (ENSNBRG00000013844) Lyretail cichlid MODERN SPECIES 302 dus3l (ENSNBRG00000015011) ENSNBRG00000014968 ENSNBRG00000014962 cndp2 (ENSNBRG00000014933) slc39a4 (ENSNBRG00000014915) ENSNBRG00000014895 SCRT1 (ENSNBRG00000014882) KLHL10 (ENSNBRG00000014863) zgc:63863 (ENSNBRG00000014838) dgat1a (ENSNBRG00000014736) cfap20 (ENSNBRG00000014678) GPR20 (ENSNBRG00000014662) #19 SLC45A4 (ENSNBRG00000014628) #20 ENSNBRG00000014566 #21 ENSNBRG00000014525 #22 ENSNBRG00000014497 #22 ENSNBRG00000014483 ENSNBRG00000014464 #22 rplp1 (ENSNBRG00000014452) clptm1l (ENSNBRG00000014408) trps1 (ENSNBRG00000014352) CSMD3 (ENSNBRG00000014186) tshz1 (ENSNBRG00000014165) znf516 (ENSNBRG00000014157) ENSNBRG00000014140 SYNGAP1 (ENSNBRG00000014033) vps72a (ENSNBRG00000014002) lingo4a (ENSNBRG00000013990) ENSNBRG00000013953 ENSNBRG00000013925 SV2A (ENSNBRG00000013892) Lyretail cichlid MODERN SPECIES 302 ENSNBRG00000015055 dus3l (ENSNBRG00000015011) ENSNBRG00000014968 ENSNBRG00000014962 cndp2 (ENSNBRG00000014933) slc39a4 (ENSNBRG00000014915) ENSNBRG00000014895 SCRT1 (ENSNBRG00000014882) KLHL10 (ENSNBRG00000014863) zgc:63863 (ENSNBRG00000014838) dgat1a (ENSNBRG00000014736) cfap20 (ENSNBRG00000014678) GPR20 (ENSNBRG00000014662) #19 SLC45A4 (ENSNBRG00000014628) #20 ENSNBRG00000014566 #21 ENSNBRG00000014525 #22 ENSNBRG00000014497 #22 ENSNBRG00000014483 ENSNBRG00000014464 #22 rplp1 (ENSNBRG00000014452) clptm1l (ENSNBRG00000014408) trps1 (ENSNBRG00000014352) CSMD3 (ENSNBRG00000014186) tshz1 (ENSNBRG00000014165) znf516 (ENSNBRG00000014157) ENSNBRG00000014140 SYNGAP1 (ENSNBRG00000014033) vps72a (ENSNBRG00000014002) lingo4a (ENSNBRG00000013990) ENSNBRG00000013953 ENSNBRG00000013925 Lyretail cichlid MODERN SPECIES 331 MTSS1 (ENSNBRG00000019815) mal2 (ENSNBRG00000019909) si:ch211-93i7.4 (ENSNBRG00000019931) TNFRSF11B (ENSNBRG00000019947) ENSNBRG00000020004 ENSNBRG00000020042 CARMIL1 (ENSNBRG00000020057) scgn (ENSNBRG00000020188) CCN3 (ENSNBRG00000020277) ENSNBRG00000020519 sntb1 (ENSNBRG00000020529) ENSNBRG00000020565 ENSNBRG00000020616 #30 PTP4A3 (ENSNBRG00000020695) #18 ndrg1b (ENSNBRG00000020757) #32 ENSNBRG00000020942 #22 ENSNBRG00000020964 ##22 ENSNBRG00000020979 ##22 ENSNBRG00000021124 MRS2 (ENSNBRG00000021882) ENSNBRG00000021901 CPQ (ENSNBRG00000021915) dscc1 (ENSNBRG00000021943) mrpl13 (ENSNBRG00000021965) COL14A1 (ENSNBRG00000022015) deptor (ENSNBRG00000022094) LIMD1 (ENSNBRG00000022129) lars2 (ENSNBRG00000022165) TMEM158 (ENSNBRG00000022207) cdcp1a (ENSNBRG00000022216) ENSNBRG00000022232 Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Anabantaria ANCESTRAL SPECIES 16 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a ENSGT00760000119766 Anabantoidei ANCESTRAL SPECIES 19 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a ENSGT00760000119766 Climbing perch MODERN SPECIES 2 MTERF1 (ENSATEG00000011055) dus3l (ENSATEG00000011064) ENSATEG00000011138 ENSATEG00000011189 ENSATEG00000011464 ENSATEG00000011645 ENSATEG00000011660 ENSATEG00000026499 zgc:63863 (ENSATEG00000011715) dgat1a (ENSATEG00000011833) ENSATEG00000026031 cfap20 (ENSATEG00000030112) ENSATEG00000011899 #19 ENSATEG00000011943 #20 DENND3 (ENSATEG00000012018) #21 ENSATEG00000012064 #22 ENSATEG00000012174 clptm1l (ENSATEG00000012184) ENSATEG00000012244 ENSATEG00000012278 ENSATEG00000012508 ENSATEG00000012526 ENSATEG00000012551 ENSATEG00000012560 ENSATEG00000028699 ENSATEG00000012771 ENSATEG00000012784 ENSATEG00000012795 ENSATEG00000012844 ENSATEG00000012853 ENSATEG00000027797 Siamese fighting fish MODERN SPECIES 2 slc39a4 (ENSBSLG00000013723) dus3l (ENSBSLG00000013508) ENSBSLG00000013459 cndp2 (ENSBSLG00000013395) RECQL4 (ENSBSLG00000013203) ENSBSLG00000013118 slc39a4 (ENSBSLG00000013147) ENSBSLG00000013078 SCRT1 (ENSBSLG00000013037) zgc:63863 (ENSBSLG00000012203) dgat1a (ENSBSLG00000011772) cfap20 (ENSBSLG00000011160) ENSBSLG00000011150 #19 SLC45A4 (ENSBSLG00000011127) #20 DENND3 (ENSBSLG00000010895) #21 PTK2 (ENSBSLG00000010100) #22 rplp1 (ENSBSLG00000010024) clptm1l (ENSBSLG00000008845) trps1 (ENSBSLG00000008809) ENSBSLG00000008805 tshz1 (ENSBSLG00000008345) znf516 (ENSBSLG00000008286) RXFP4 (ENSBSLG00000019841) SYNGAP1 (ENSBSLG00000019025) vps72a (ENSBSLG00000018912) lingo4a (ENSBSLG00000018905) ctss1 (ENSBSLG00000018880) SV2A (ENSBSLG00000018624) sf3b4 (ENSBSLG00000018611) LIX1L (ENSBSLG00000018594) ENSBSLG00000018586 Zig-zag eel MODERN SPECIES 2 ENSMAMG00000015737 MTERF1 (ENSMAMG00000015682) dus3l (ENSMAMG00000015637) ENSMAMG00000015608 ENSMAMG00000015582 ENSMAMG00000015565 slc39a4 (ENSMAMG00000015561) ENSMAMG00000015541 ENSMAMG00000015514 zgc:63863 (ENSMAMG00000015459) dgat1a (ENSMAMG00000015394) cfap20 (ENSMAMG00000015366) ENSMAMG00000015327 #19 ENSMAMG00000015281 #20 ENSMAMG00000015260 #21 ENSMAMG00000015199 #22 ENSMAMG00000015182 clptm1l (ENSMAMG00000015115) ENSMAMG00000015100 ENSMAMG00000026702 ENSMAMG00000014951 ENSMAMG00000014926 ENSMAMG00000025372 ENSMAMG00000014910 ENSMAMG00000014773 ENSMAMG00000014737 ENSMAMG00000014730 ENSMAMG00000014698 ENSMAMG00000014692 ENSMAMG00000014681 ENSMAMG00000027440 Carangaria ANCESTRAL SPECIES 14 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Pleuronectoidei ANCESTRAL SPECIES 15 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Turbot MODERN SPECIES 14 ENSSMAG00000004854 ENSSMAG00000004888 ENSSMAG00000004896 ENSSMAG00000004934 ENSSMAG00000004943 ENSSMAG00000004982 ENSSMAG00000005002 ENSSMAG00000005041 zgc:63863 (ENSSMAG00000005137) ENSSMAG00000026994 dgat1a (ENSSMAG00000005178) cfap20 (ENSSMAG00000031899) ENSSMAG00000005278 #19 ENSSMAG00000005307 #20 DENND3 (ENSSMAG00000005636) #21 ENSSMAG00000005698 #22 ENSSMAG00000005950 ENSSMAG00000006061 ENSSMAG00000006107 ENSSMAG00000024835 ENSSMAG00000006560 ENSSMAG00000006570 ENSSMAG00000006587 ENSSMAG00000006697 ENSSMAG00000006726 ENSSMAG00000006733 ENSSMAG00000006780 ENSSMAG00000006796 ENSSMAG00000006837 ENSSMAG00000006846 ENSSMAG00000037593 Tongue sole MODERN SPECIES 9 cdk6 (ENSCSEG00000012577) hepacam2 (ENSCSEG00000012589) VPS50 (ENSCSEG00000012607) CALCR (ENSCSEG00000012673) tfpi2 (ENSCSEG00000012705) gngt1 (ENSCSEG00000012711) zgc:85777 (ENSCSEG00000012715) bet1 (ENSCSEG00000012731) col1a2 (ENSCSEG00000012737) ENSCSEG00000012762 ENSCSEG00000012778 ENSCSEG00000012783 ENSCSEG00000012791 ENSCSEG00000012798 ndufv1 (ENSCSEG00000012805) PTK2 (ENSCSEG00000012851) #22 rplp1 (ENSCSEG00000012994) clptm1l (ENSCSEG00000013040) ENSCSEG00000013063 trps1 (ENSCSEG00000013076) CSMD3 (ENSCSEG00000013095) tshz1 (ENSCSEG00000013167) znf516 (ENSCSEG00000013170) ENSCSEG00000013177 SYNGAP1 (ENSCSEG00000013184) ENSCSEG00000013225 FAM135B (ENSCSEG00000013367) #28 KHDRBS3 (ENSCSEG00000013385) #29 ST3GAL1 (ENSCSEG00000013408) #31 ENSCSEG00000013425 ENSCSEG00000013448 Carangaria_A ANCESTRAL SPECIES 16 ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT01040000240400.c.a.b.a.b.a.a.b.b.e.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Seriola ANCESTRAL SPECIES 12 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT01040000240400.c.a.b.a.b.a.a.b.b.e.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Greater amberjack MODERN SPECIES 48 MTERF1 (ENSSDUG00000013580) dus3l (ENSSDUG00000013517) ENSSDUG00000013486 cndp2 (ENSSDUG00000013309) RECQL4 (ENSSDUG00000013245) slc39a4 (ENSSDUG00000013223) SCRT1 (ENSSDUG00000013215) KLHL10 (ENSSDUG00000013192) ENSSDUG00000013189 zgc:63863 (ENSSDUG00000013176) dgat1a (ENSSDUG00000013146) cfap20 (ENSSDUG00000013130) GPR20 (ENSSDUG00000013098) #19 SLC45A4 (ENSSDUG00000013026) #20 DENND3 (ENSSDUG00000012929) #21 PTK2 (ENSSDUG00000012750) #22 rplp1 (ENSSDUG00000012713) clptm1l (ENSSDUG00000012627) trps1 (ENSSDUG00000012576) ENSSDUG00000012561 CSMD3 (ENSSDUG00000012391) tshz1 (ENSSDUG00000012354) znf516 (ENSSDUG00000012341) ENSSDUG00000012328 SYNGAP1 (ENSSDUG00000012218) vps72a (ENSSDUG00000012188) lingo4a (ENSSDUG00000012181) ctss1 (ENSSDUG00000012145) ENSSDUG00000012123 SV2A (ENSSDUG00000012082) sf3b4 (ENSSDUG00000012064) Yellowtail amberjack MODERN SPECIES 2954 ENSSLDG00000011044 zgc:63863 (ENSSLDG00000011075) dgat1a (ENSSLDG00000011104) cfap20 (ENSSLDG00000011143) ENSSLDG00000011180 #19 SLC45A4 (ENSSLDG00000011250) #20 DENND3 (ENSSLDG00000011375) #21 PTK2 (ENSSLDG00000011667) #22 rplp1 (ENSSLDG00000011985) clptm1l (ENSSLDG00000012012) trps1 (ENSSLDG00000012102) ENSSLDG00000012131 CSMD3 (ENSSLDG00000012173) ENSSLDG00000012325 tshz1 (ENSSLDG00000012345) Barramundi perch MODERN SPECIES 225 PTK2 (ENSLCAG00010013097) #22 rplp1 (ENSLCAG00010012922) clptm1l (ENSLCAG00010012899) ENSLCAG00010012889 trps1 (ENSLCAG00010012884) CSMD3 (ENSLCAG00010012715) tshz1 (ENSLCAG00010012647) ENSLCAG00010012643 ENSLCAG00010012640 Eupercaria ANCESTRAL SPECIES 11 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Tetraodontidae ANCESTRAL SPECIES 20 ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 ENSGT00950000182940.b.a.b.a.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00940000159198.g ENSGT00390000009543 ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 ENSGT00390000004263.a.d.b ENSGT00950000182995.e.b.`b ENSGT00530000063631.a.k ENSGT00500000044921.a ENSGT00510000047245 ENSGT00940000165758 ENSGT00940000164175.b ENSGT00940000159342.a ENSGT00940000172951 ENSGT01050000244890.a.a.a.g ENSGT00940000159758 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 15 ywhaz (ENSTNIG00000009152) pabpc1b (ENSTNIG00000009153) ENSTNIG00000009154 LIX1L (ENSTNIG00000009155) sf3b4 (ENSTNIG00000009156) SV2A (ENSTNIG00000009157) ctss1 (ENSTNIG00000009158) lingo4a (ENSTNIG00000009159) ENSTNIG00000009160 ENSTNIG00000009161 SYNGAP1 (ENSTNIG00000009162) vps72a (ENSTNIG00000009163) GPR20 (ENSTNIG00000009164) #19 SLC45A4 (ENSTNIG00000002435) #20 DENND3 (ENSTNIG00000009165) #21 ENSTNIG00000009166 #22 PTK2 (ENSTNIG00000009167) #22 fam91a1 (ENSTNIG00000009169) spire1a (ENSTNIG00000009170) ENSTNIG00000009171 ATP6V1C1 (ENSTNIG00000009172) azin1b (ENSTNIG00000009173) adnp2b (ENSTNIG00000009174) ggcta (ENSTNIG00000009175) snrpd1 (ENSTNIG00000001224) ankib1a (ENSTNIG00000009176) ENSTNIG00000001242 fam83hb (ENSTNIG00000009177) grinaa (ENSTNIG00000000386) mapk15 (ENSTNIG00000009178) vps28 (ENSTNIG00000009179) Tetraodon MODERN SPECIES 15 pabpc1b (ENSTNIG00000009153) ENSTNIG00000009154 LIX1L (ENSTNIG00000009155) sf3b4 (ENSTNIG00000009156) SV2A (ENSTNIG00000009157) ctss1 (ENSTNIG00000009158) lingo4a (ENSTNIG00000009159) ENSTNIG00000009160 ENSTNIG00000009161 SYNGAP1 (ENSTNIG00000009162) vps72a (ENSTNIG00000009163) GPR20 (ENSTNIG00000009164) #19 SLC45A4 (ENSTNIG00000002435) #20 DENND3 (ENSTNIG00000009165) #21 ENSTNIG00000009166 #22 PTK2 (ENSTNIG00000009167) #22 fam91a1 (ENSTNIG00000009169) spire1a (ENSTNIG00000009170) ENSTNIG00000009171 ATP6V1C1 (ENSTNIG00000009172) azin1b (ENSTNIG00000009173) adnp2b (ENSTNIG00000009174) ggcta (ENSTNIG00000009175) snrpd1 (ENSTNIG00000001224) ankib1a (ENSTNIG00000009176) ENSTNIG00000001242 fam83hb (ENSTNIG00000009177) grinaa (ENSTNIG00000000386) mapk15 (ENSTNIG00000009178) vps28 (ENSTNIG00000009179) cap2 (ENSTNIG00000000065) Fugu MODERN SPECIES 3 pabpc1b (ENSTRUG00000003767) ENSTRUG00000004297 lix1l (ENSTRUG00000004344) sf3b4 (ENSTRUG00000004516) SV2A (ENSTRUG00000004781) ctss1 (ENSTRUG00000005311) lingo4a (ENSTRUG00000005626) ENSTRUG00000028553 ENSTRUG00000027221 SYNGAP1 (ENSTRUG00000005680) vps72a (ENSTRUG00000006093) GPR20 (ENSTRUG00000029161) #19 ENSTRUG00000031981 SLC45A4 (ENSTRUG00000006541) #20 DENND3 (ENSTRUG00000007196) #21 PTK2 (ENSTRUG00000007362) #22 lratd2a (ENSTRUG00000007744) fam91a1 (ENSTRUG00000007769) spire1a (ENSTRUG00000008095) ENSTRUG00000020546 ATP6V1C1 (ENSTRUG00000008427) azin1b (ENSTRUG00000020120) adnp2b (ENSTRUG00000030984) ggcta (ENSTRUG00000021278) snrpd1 (ENSTRUG00000008977) ankib1a (ENSTRUG00000009032) ENSTRUG00000023862 fam83hb (ENSTRUG00000009193) ENSTRUG00000029207 grina (ENSTRUG00000009217) mapk15 (ENSTRUG00000009284) Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a ENSGT00760000119766 European seabass MODERN SPECIES 22 cyp51 (ENSDLAG00005011976) ENSDLAG00005011838 dus3l (ENSDLAG00005011491) ENSDLAG00005030960 ENSDLAG00005011330 ENSDLAG00005010708 ENSDLAG00005010700 ENSDLAG00005010689 ENSDLAG00005010627 zgc:63863 (ENSDLAG00005027179) dgat1a (ENSDLAG00005010300) cfap20 (ENSDLAG00005010284) ENSDLAG00005010275 #19 ENSDLAG00005010272 #20 ENSDLAG00005010225 #21 ENSDLAG00005009634 #22 ENSDLAG00005009543 ENSDLAG00005009523 ENSDLAG00005006477 ENSDLAG00005006308 ENSDLAG00005006301 ENSDLAG00005006292 ENSDLAG00005005485 ENSDLAG00005031604 ENSDLAG00005028344 ENSDLAG00005030709 ENSDLAG00005034178 pabpc1b (ENSDLAG00005003138) ENSDLAG00005002987 znf706 (ENSDLAG00005026451) grhl2b (ENSDLAG00005002772) Large yellow croaker MODERN SPECIES 484 MTERF1 (ENSLCRG00005007098) dus3l (ENSLCRG00005007104) ENSLCRG00005007332 cndp2 (ENSLCRG00005007336) ENSLCRG00005007495 ENSLCRG00005007521 ENSLCRG00005007524 SCRT1 (ENSLCRG00005007526) KLHL10 (ENSLCRG00005007530) zgc:63863 (ENSLCRG00005007533) dgat1a (ENSLCRG00005003023) cfap20 (ENSLCRG00005004526) ENSLCRG00005004532 #19 SLC45A4 (ENSLCRG00005004535) #20 DENND3 (ENSLCRG00005004563) #21 PTK2 (ENSLCRG00005004656) #22 clptm1l (ENSLCRG00005005246) trps1 (ENSLCRG00005005352) ENSLCRG00005005355 CSMD3 (ENSLCRG00005005650) ENSLCRG00005006378 tshz1 (ENSLCRG00005006381) znf516 (ENSLCRG00005006383) ENSLCRG00005006389 SYNGAP1 (ENSLCRG00005006430) vps72a (ENSLCRG00005006882) lingo4a (ENSLCRG00005006894) ctss1 (ENSLCRG00005006898) CTSS (ENSLCRG00005006917) SV2A (ENSLCRG00005006957) sf3b4 (ENSLCRG00005007593) Gilthead seabream MODERN SPECIES 17 cyp51 (ENSSAUG00010013151) ENSSAUG00010013300 dus3l (ENSSAUG00010013314) ENSSAUG00010013955 cndp2 (ENSSAUG00010013976) ENSSAUG00010014271 ENSSAUG00010014274 ENSSAUG00010014275 SCRT1 (ENSSAUG00010014276) zgc:63863 (ENSSAUG00010014277) dgat1a (ENSSAUG00010014280) cfap20 (ENSSAUG00010014298) GPR20 (ENSSAUG00010014299) #19 SLC45A4 (ENSSAUG00010014300) #20 DENND3 (ENSSAUG00010014304) #21 PTK2 (ENSSAUG00010014341) #22 rplp1 (ENSSAUG00010016580) clptm1l (ENSSAUG00010016589) trps1 (ENSSAUG00010016602) CSMD3 (ENSSAUG00010016627) tshz1 (ENSSAUG00010016651) znf516 (ENSSAUG00010016652) RXFP4 (ENSSAUG00010016653) SYNGAP1 (ENSSAUG00010016670) vps72a (ENSSAUG00010017287) ENSSAUG00010017290 ENSSAUG00010017292 SV2A (ENSSAUG00010001240) sf3b4 (ENSSAUG00010001398) LIX1L (ENSSAUG00010001405) ENSSAUG00010001411 Perciformes ANCESTRAL SPECIES 11 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408.f ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Perciformes_a ANCESTRAL SPECIES 14 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408.f ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Channel bull blenny MODERN SPECIES 2 MTERF1 (ENSCGOG00000001566) dus3l (ENSCGOG00000001553) ENSCGOG00000001548 cndp2 (ENSCGOG00000001355) ENSCGOG00000001340 RECQL4 (ENSCGOG00000001283) ENSCGOG00000014107 SCRT1 (ENSCGOG00000014105) KLHL10 (ENSCGOG00000014089) zgc:63863 (ENSCGOG00000014085) dgat1a (ENSCGOG00000013924) cfap20 (ENSCGOG00000013912) GPR20 (ENSCGOG00000013911) #19 SLC45A4 (ENSCGOG00000013897) #20 DENND3 (ENSCGOG00000013831) #21 PTK2 (ENSCGOG00000011000) #22 rplp1 (ENSCGOG00000010946) clptm1l (ENSCGOG00000010577) ENSCGOG00000010558 trps1 (ENSCGOG00000010550) ENSCGOG00000010544 CSMD3 (ENSCGOG00000010256) tshz1 (ENSCGOG00000010240) RXFP4 (ENSCGOG00000010238) SYNGAP1 (ENSCGOG00000009649) vps72a (ENSCGOG00000009632) lingo4a (ENSCGOG00000009630) ctss1 (ENSCGOG00000009468) ENSCGOG00000009104 SV2A (ENSCGOG00000008440) sf3b4 (ENSCGOG00000008421) Pike perch MODERN SPECIES 13 MTERF1 (ENSSLUG00000000198) ENSSLUG00000000202 dus3l (ENSSLUG00000000227) ENSSLUG00000000253 cndp2 (ENSSLUG00000000375) RECQL4 (ENSSLUG00000000620) ENSSLUG00000000632 SCRT1 (ENSSLUG00000000637) KLHL10 (ENSSLUG00000000646) zgc:63863 (ENSSLUG00000000669) dgat1a (ENSSLUG00000000703) cfap20 (ENSSLUG00000000762) ENSSLUG00000000766 #19 SLC45A4 (ENSSLUG00000000775) #20 DENND3 (ENSSLUG00000000799) #21 PTK2 (ENSSLUG00000000917) #22 rplp1 (ENSSLUG00000001213) clptm1l (ENSSLUG00000001221) ENSSLUG00000001237 trps1 (ENSSLUG00000001242) CSMD3 (ENSSLUG00000001279) tshz1 (ENSSLUG00000001373) ENSSLUG00000001375 ENSSLUG00000001380 SYNGAP1 (ENSSLUG00000001383) vps72a (ENSSLUG00000001392) lingo4a (ENSSLUG00000001395) ctss1 (ENSSLUG00000001398) ENSSLUG00000001399 SV2A (ENSSLUG00000001407) sf3b4 (ENSSLUG00000001425) Cottioidei ANCESTRAL SPECIES 16 ENSGT00530000063721.A ENSGT00930000151026 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000156500 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000171019 ENSGT00940000161408.f ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 Stickleback DUPLICATION Stickleback MODERN SPECIES 9 si:dkey-266f7.9 (ENSGACG00000004184) krit1 (ENSGACG00000004168) cyp51 (ENSGACG00000004161) ENSGACG00000004143 dus3l (ENSGACG00000004109) cndp2 (ENSGACG00000004084) ENSGACG00000004076 SCRT1 (ENSGACG00000004072) zgc:63863 (ENSGACG00000004066) dgat1a (ENSGACG00000004051) cfap20 (ENSGACG00000004039) ENSGACG00000004037 #19 SLC45A4 (ENSGACG00000004032) #20 DENND3 (ENSGACG00000004021) #21 PTK2 (ENSGACG00000004011) #22 ENSGACG00000004003 #22 rplp1 (ENSGACG00000003995) clptm1l (ENSGACG00000003981) trps1 (ENSGACG00000003970) ENSGACG00000003969 CSMD3 (ENSGACG00000003938) tshz1 (ENSGACG00000003937) ENSGACG00000003934 ENSGACG00000003932 ENSGACG00000003931 SYNGAP1 (ENSGACG00000003919) vps72a (ENSGACG00000003903) lingo4a (ENSGACG00000003902) ctss1 (ENSGACG00000003898) ENSGACG00000003870 SV2A (ENSGACG00000003844) Stickleback MODERN SPECIES 9 mrpl9 (ENSGACG00000004192) si:dkey-266f7.9 (ENSGACG00000004184) krit1 (ENSGACG00000004168) cyp51 (ENSGACG00000004161) ENSGACG00000004143 dus3l (ENSGACG00000004109) cndp2 (ENSGACG00000004084) ENSGACG00000004076 SCRT1 (ENSGACG00000004072) zgc:63863 (ENSGACG00000004066) dgat1a (ENSGACG00000004051) cfap20 (ENSGACG00000004039) ENSGACG00000004037 #19 SLC45A4 (ENSGACG00000004032) #20 DENND3 (ENSGACG00000004021) #21 PTK2 (ENSGACG00000004011) #22 ENSGACG00000004003 #22 rplp1 (ENSGACG00000003995) clptm1l (ENSGACG00000003981) trps1 (ENSGACG00000003970) ENSGACG00000003969 CSMD3 (ENSGACG00000003938) tshz1 (ENSGACG00000003937) ENSGACG00000003934 ENSGACG00000003932 ENSGACG00000003931 SYNGAP1 (ENSGACG00000003919) vps72a (ENSGACG00000003903) lingo4a (ENSGACG00000003902) ctss1 (ENSGACG00000003898) ENSGACG00000003870 Lumpfish MODERN SPECIES 2 rpz2 (ENSCLMG00005001575) krit1 (ENSCLMG00005001596) cyp51 (ENSCLMG00005001706) ENSCLMG00005001757 MTERF1 (ENSCLMG00005001788) dus3l (ENSCLMG00005001799) cndp2 (ENSCLMG00005002128) ENSCLMG00005002139 ENSCLMG00005002140 SCRT1 (ENSCLMG00005002141) zgc:63863 (ENSCLMG00005002142) dgat1a (ENSCLMG00005002143) cfap20 (ENSCLMG00005002144) GPR20 (ENSCLMG00005002145) #19 SLC45A4 (ENSCLMG00005002146) #20 PTK2 (ENSCLMG00005002160) #22 drc1 (ENSCLMG00005002232) rplp1 (ENSCLMG00005002236) clptm1l (ENSCLMG00005002245) ENSCLMG00005002260 CSMD3 (ENSCLMG00005002265) tshz1 (ENSCLMG00005002275) SV2A (ENSCLMG00005002276) sf3b4 (ENSCLMG00005002278) LIX1L (ENSCLMG00005002280) ENSCLMG00005002284 pabpc1b (ENSCLMG00005002299) ENSCLMG00005002337 znf706 (ENSCLMG00005002338) grhl2b (ENSCLMG00005002343) ncaldb (ENSCLMG00005002351) Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 71 ENSLBEG00000025617 RPRD1A (ENSLBEG00000025645) fkbp9 (ENSLBEG00000025665) crtap (ENSLBEG00000025699) ENSLBEG00000025722 fbxl2 (ENSLBEG00000025748) clasp2 (ENSLBEG00000025890) SLC45A4 (ENSLBEG00000026195) #20 DENND3 (ENSLBEG00000026220) #21 PTK2 (ENSLBEG00000026333) #22 rplp1 (ENSLBEG00000026469) clptm1l (ENSLBEG00000026499) trps1 (ENSLBEG00000026549) ENSLBEG00000026564 CSMD3 (ENSLBEG00000026598) tshz1 (ENSLBEG00000026670) znf516 (ENSLBEG00000026679) ENSLBEG00000026684 ENSLBEG00000026694 SYNGAP1 (ENSLBEG00000026710) vps72a (ENSLBEG00000026731) lingo4a (ENSLBEG00000026746) ctss1 (ENSLBEG00000026758) ENSLBEG00000026788 SV2A (ENSLBEG00000026804) Ballan wrasse MODERN SPECIES 69 PTK2 (ENSLBEG00000023042) #22 ENSLBEG00000023013 ##22 ENSLBEG00000022997 CCN3 (ENSLBEG00000022979) scgn (ENSLBEG00000022946) CARMIL1 (ENSLBEG00000022854) ENSLBEG00000022820 TNFRSF11B (ENSLBEG00000022804) ENSLBEG00000022790 ENSLBEG00000022774 ENSLBEG00000022761 mal2 (ENSLBEG00000022749) MTSS1 (ENSLBEG00000022637) TMEM65 (ENSLBEG00000022553) mboat1 (ENSLBEG00000022521) ENSLBEG00000022497 Osteoglossiformes ANCESTRAL SPECIES 6 ENSGT00940000161897.b.a ENSGT00390000018422 ENSGT00390000016546 ENSGT00940000160387 ENSGT00940000156930.z ENSGT00940000160042 ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b.a ENSGT00950000183081.b.i.b.b ENSGT00390000004554 ENSGT00940000166193 ENSGT01040000240444.B.a #19 ENSGT00950000182914.a.a.a.c.b #20 ENSGT00940000155784.C.u.b #21 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00390000009988 ENSGT00390000016823 ENSGT00390000012412 ENSGT00940000157222.a.b ENSGT00940000158117 ENSGT00390000015984 ENSGT00390000008161.a.b ENSGT00940000155321 ENSGT00390000010887.a ENSGT00940000160706 ENSGT00940000176888 ENSGT01030000235077 ENSGT00940000154655.a.i.b P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 13 HSF1 (ENSPKIG00000020336) scxa (ENSPKIG00000020300) bop1 (ENSPKIG00000020273) hgh1 (ENSPKIG00000020253) RECQL4 (ENSPKIG00000020206) MROH1 (ENSPKIG00000020137) ENSPKIG00000020105 scrt1a (ENSPKIG00000020085) zgc:63863 (ENSPKIG00000020056) dgat1a (ENSPKIG00000019953) cfap20 (ENSPKIG00000020019) ENSPKIG00000019860 GPR20 (ENSPKIG00000019821) #19 SLC45A4 (ENSPKIG00000019786) #20 DENND3 (ENSPKIG00000019719) #21 PTK2 (ENSPKIG00000019417) #22 rplp1 (ENSPKIG00000019305) ENSPKIG00000019289 ENSPKIG00000019273 ENSPKIG00000019261 clptm1l (ENSPKIG00000019212) MRS2 (ENSPKIG00000019173) tpmt.1 (ENSPKIG00000019144) ENSPKIG00000019102 sdc2 (ENSPKIG00000019071) angpt1 (ENSPKIG00000019044) abrab (ENSPKIG00000018974) SAMD12 (ENSPKIG00000018954) EXT1 (ENSPKIG00000018929) med30 (ENSPKIG00000018912) SLC30A8 (ENSPKIG00000018892) P. kingsleyae MODERN SPECIES 1 dync1i1 (ENSPKIG00000021394) pon1 (ENSPKIG00000021420) ENSPKIG00000021446 ENSPKIG00000021505 PHF20L1 (ENSPKIG00000021529) #36 tg (ENSPKIG00000021671) #35 SLA (ENSPKIG00000021885) #34 ccn4b (ENSPKIG00000021901) #33 PTP4A3 (ENSPKIG00000021939) #18 ENSPKIG00000021972 ENSPKIG00000021998 SCX (ENSPKIG00000022008) MROH1 (ENSPKIG00000022128) SCRT1 (ENSPKIG00000022303) SLC45A4 (ENSPKIG00000022320) #20 ENSPKIG00000022393 #22 ENSPKIG00000022502 CLPTM1L (ENSPKIG00000022517) ENSPKIG00000022549 CPQ (ENSPKIG00000022581) ext1b (ENSPKIG00000022642) Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 15 hsf1 (ENSSFOG00015010692) SCX (ENSSFOG00015010672) bop1 (ENSSFOG00015010596) hgh1 (ENSSFOG00015010554) RECQL4 (ENSSFOG00015010493) ENSSFOG00015029222 ENSSFOG00015010346 scrt1a (ENSSFOG00015001195) zgc:63863 (ENSSFOG00015010311) dgat1a (ENSSFOG00015010249) cfap20 (ENSSFOG00015010197) ENSSFOG00015010042 GPR20 (ENSSFOG00015009994) #19 SLC45A4 (ENSSFOG00015030998) #20 DENND3 (ENSSFOG00015009930) #21 PTK2 (ENSSFOG00015009767) #22 rplp1 (ENSSFOG00015009860) clptm1l (ENSSFOG00015009651) MRS2 (ENSSFOG00015009611) tpmt.1 (ENSSFOG00015009588) ENSSFOG00015025759 sdc2 (ENSSFOG00015009560) ENSSFOG00015024298 cfap20 (ENSSFOG00015009536) angpt1 (ENSSFOG00015009495) abrab (ENSSFOG00015025915) SAMD12 (ENSSFOG00015030534) ext1b (ENSSFOG00015030667) med30 (ENSSFOG00015029678) SLC30A8 (ENSSFOG00015009324) ENSSFOG00015009295 Asian bonytongue MODERN SPECIES 9 pon1 (ENSSFOG00015030107) ENSSFOG00015032720 ENSSFOG00015000649 PHF20L1 (ENSSFOG00015025925) #36 SLA (ENSSFOG00015001015) #34 tg (ENSSFOG00015000751) #35 ccn4b (ENSSFOG00015001020) #33 ndrg1b (ENSSFOG00015001027) #32 ptp4a3a (ENSSFOG00015001075) #18 ENSSFOG00015001086 SCX (ENSSFOG00015001141) MROH1 (ENSSFOG00015001167) scrt1b (ENSSFOG00015010329) dgat1a (ENSSFOG00015001216) SLC45A4 (ENSSFOG00015001234) #20 ENSSFOG00015001252 #22 ENSSFOG00015001302 CPQ (ENSSFOG00015001341) ENSSFOG00015001399 ENSSFOG00015001443 ENSSFOG00015001518 ANKIB1 (ENSSFOG00015001568) ctnnb1 (ENSSFOG00015001677) ULK4 (ENSSFOG00015001754) TRAK1 (ENSSFOG00015001806) ccka (ENSSFOG00015030275) trim71 (ENSSFOG00015001866) TCAIM (ENSSFOG00015001891) ABHD5 (ENSSFOG00015001946) snrka (ENSSFOG00015001970) pomgnt2 (ENSSFOG00015002005) Reedfish DUPLICATION Reedfish MODERN SPECIES 484 ENSECRG00000018963 #22 Reedfish MODERN SPECIES 4 SCX (ENSECRG00000017218) bop1 (ENSECRG00000017193) hgh1 (ENSECRG00000017167) ENSECRG00000016086 ENSECRG00000015948 ENSECRG00000015809 ENSECRG00000015759 scrt1b (ENSECRG00000015740) zgc:63863 (ENSECRG00000015700) dgat1b (ENSECRG00000015654) cfap20 (ENSECRG00000015598) ENSECRG00000015223 GPR20 (ENSECRG00000015121) #19 SLC45A4 (ENSECRG00000015076) #20 DENND3 (ENSECRG00000014983) #21 PTK2 (ENSECRG00000014902) #22 rplp1 (ENSECRG00000014863) ENSECRG00000014824 ENSECRG00000014799 ago2 (ENSECRG00000013912) #23 chrac1 (ENSECRG00000013769) TRAPPC9 (ENSECRG00000013747) #25 kcnk9 (ENSECRG00000013733) #26 ENSECRG00000013701 ENSECRG00000013676 ENSECRG00000013659 #28 ENSECRG00000013641 #28 KHDRBS3 (ENSECRG00000013615) #29 ENSECRG00000013599 ZFAT (ENSECRG00000013533) #30 ENSECRG00000013487