Tetrapoda ANCESTRAL SPECIES 1 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT00940000159581 #17 ENSGT00970000197866 ENSGT00940000166193 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 Amniota ANCESTRAL SPECIES 3 ENSGT00940000153837.a.a ENSGT00940000162943 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT00450000040324.a ENSGT00940000159581 #17 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00970000197866 ENSGT00940000166193 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Mammalia ANCESTRAL SPECIES 3 ENSGT00940000161506 ENSGT00730000111514 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000177637 ENSGT00940000156215 Theria ANCESTRAL SPECIES 7 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00450000040324.a ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000177637 ENSGT00940000156215 Eutheria ANCESTRAL SPECIES 15 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000177637 ENSGT00940000156215 Boreoeutheria ANCESTRAL SPECIES 19 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.e.b ENSGT00940000177637 Euarchontoglires ANCESTRAL SPECIES 19 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.e.b ENSGT00940000177637 Primates ANCESTRAL SPECIES 20 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Haplorrhini ANCESTRAL SPECIES 19 ENSGT00940000164325 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Simiiformes ANCESTRAL SPECIES 20 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Catarrhini ANCESTRAL SPECIES 15 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 #21 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Hominoidea ANCESTRAL SPECIES 14 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00910000148395 #19 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 #21 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725.c #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Gibbon MODERN SPECIES 6 LYPD2 (ENSNLEG00000001310) #7 SLURP1 (ENSNLEG00000001300) #8 THEM6 (ENSNLEG00000001298) #9 ENSNLEG00000029363 #10 PSCA (ENSNLEG00000001284) #11 JRK (ENSNLEG00000001280) #12 ADGRB1 (ENSNLEG00000001670) #13 ENSNLEG00000001660 #14 ENSNLEG00000034800 #15 MROH5 (ENSNLEG00000001633) #16 PTP4A3 (ENSNLEG00000001610) #17 SLC45A4 (ENSNLEG00000001582) #18 ENSNLEG00000001579 #19 DENND3 (ENSNLEG00000001560) #20 ENSNLEG00000033490 #21 PTK2 (ENSNLEG00000001510) #22 AGO2 (ENSNLEG00000001461) #23 ENSNLEG00000030588 #24 ENSNLEG00000029889 #25 ENSNLEG00000018803 #26 TRAPPC9 (ENSNLEG00000001396) #27 KCNK9 (ENSNLEG00000001377) #28 COL22A1 (ENSNLEG00000032227) #29 FAM135B (ENSNLEG00000010778) #30 ENSNLEG00000034974 #31 KHDRBS3 (ENSNLEG00000010766) #32 ZFAT (ENSNLEG00000010576) #33 ST3GAL1 (ENSNLEG00000005865) #34 ENSNLEG00000036242 #35 NDRG1 (ENSNLEG00000005826) #36 CCN4 (ENSNLEG00000030189) #37 Hominidae ANCESTRAL SPECIES 15 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00910000148395 #19 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 #21 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000163244.d.b.a.b.b.a.a.a.b #26 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725.c #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Orangutan MODERN SPECIES 21 SLURP1 (ENSPPYG00000019027) #8 THEM6 (ENSPPYG00000018921) #9 ENSPPYG00000035700 #10 PSCA (ENSPPYG00000018919) #11 JRK (ENSPPYG00000018918) #12 ARC (ENSPPYG00000018917) ENSPPYG00000018915 #14 ENSPPYG00000035984 C8orf90 (ENSPPYG00000032741) MROH5 (ENSPPYG00000039561) #16 PTP4A3 (ENSPPYG00000033406) #17 GPR20 (ENSPPYG00000018912) SLC45A4 (ENSPPYG00000018911) #18 DENND3 (ENSPPYG00000018910) #20 ENSPPYG00000031469 #21 PTK2 (ENSPPYG00000018909) #22 AGO2 (ENSPPYG00000018908) #23 CHRAC1 (ENSPPYG00000018907) #24 ENSPPYG00000034298 ENSPPYG00000018905 #26 TRAPPC9 (ENSPPYG00000018904) #27 KCNK9 (ENSPPYG00000018903) #28 COL22A1 (ENSPPYG00000018902) #29 FAM135B (ENSPPYG00000018901) #30 KHDRBS3 (ENSPPYG00000018899) #32 ZFAT (ENSPPYG00000018898) #33 ST3GAL1 (ENSPPYG00000018896) #34 NDRG1 (ENSPPYG00000018895) #36 CCN4 (ENSPPYG00000018894) #37 SLA (ENSPPYG00000018893) TG (ENSPPYG00000018892) Homo/Pan/Gorilla group ANCESTRAL SPECIES 13 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00910000148395 #19 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 #21 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000163244.d.b.a.b.b.a.a.a.b #26 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725.c #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Homo/Pan group ANCESTRAL SPECIES 12 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 #21 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000163244.d.b.a.b.b.a.a.a.b #26 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725.c #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Pan ANCESTRAL SPECIES 11 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 #21 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000163244.d.b.a.b.b.a.a.a.b #26 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725.c #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Chimpanzee MODERN SPECIES 21 SLURP1 (ENSPTRG00000043368) #8 THEM6 (ENSPTRG00000020638) #9 LY6K (ENSPTRG00000020637) #10 PSCA (ENSPTRG00000020636) #11 JRK (ENSPTRG00000048020) #12 ARC (ENSPTRG00000030920) ADGRB1 (ENSPTRG00000020635) #13 TSNARE1 (ENSPTRG00000020633) #14 C8orf90 (ENSPTRG00000051970) MROH5 (ENSPTRG00000044474) #16 PTP4A3 (ENSPTRG00000020631) #17 GPR20 (ENSPTRG00000030922) SLC45A4 (ENSPTRG00000020628) #18 DENND3 (ENSPTRG00000020626) #20 ENSPTRG00000047780 #21 PTK2 (ENSPTRG00000020624) #22 AGO2 (ENSPTRG00000020622) #23 CHRAC1 (ENSPTRG00000049044) #24 ENSPTRG00000048472 #26 TRAPPC9 (ENSPTRG00000020615) #27 KCNK9 (ENSPTRG00000048938) #28 COL22A1 (ENSPTRG00000020613) #29 FAM135B (ENSPTRG00000020611) #30 ENSPTRG00000044953 ENSPTRG00000042207 #31 KHDRBS3 (ENSPTRG00000020608) #32 ZFAT (ENSPTRG00000020607) #33 ST3GAL1 (ENSPTRG00000044747) #34 ENSPTRG00000046571 ##35 NDRG1 (ENSPTRG00000020603) #36 CCN4 (ENSPTRG00000020602) #37 Bonobo MODERN SPECIES 21 SLURP1 (ENSPPAG00000006874) #8 THEM6 (ENSPPAG00000043629) #9 LY6K (ENSPPAG00000037331) #10 PSCA (ENSPPAG00000035765) #11 JRK (ENSPPAG00000037812) #12 ARC (ENSPPAG00000000502) ADGRB1 (ENSPPAG00000032958) #13 TSNARE1 (ENSPPAG00000044059) #14 ENSPPAG00000036750 MROH5 (ENSPPAG00000035893) #16 PTP4A3 (ENSPPAG00000038953) #17 GPR20 (ENSPPAG00000002891) SLC45A4 (ENSPPAG00000029066) #18 DENND3 (ENSPPAG00000032948) #20 ENSPPAG00000031187 #21 PTK2 (ENSPPAG00000042953) #22 AGO2 (ENSPPAG00000037787) #23 CHRAC1 (ENSPPAG00000034467) #24 ENSPPAG00000007802 #26 TRAPPC9 (ENSPPAG00000030205) #27 KCNK9 (ENSPPAG00000042017) #28 COL22A1 (ENSPPAG00000038842) #29 FAM135B (ENSPPAG00000041146) #30 ENSPPAG00000032028 #31 KHDRBS3 (ENSPPAG00000043998) #32 ZFAT (ENSPPAG00000030339) #33 ST3GAL1 (ENSPPAG00000039735) #34 NDRG1 (ENSPPAG00000023493) #36 CCN4 (ENSPPAG00000042561) #37 SLA (ENSPPAG00000041911) TG (ENSPPAG00000033957) Human MODERN SPECIES 20 LYPD2 (ENSG00000197353) #7 SLURP1 (ENSG00000126233) #8 THEM6 (ENSG00000130193) #9 LY6K (ENSG00000160886) #10 PSCA (ENSG00000167653) #11 JRK (ENSG00000234616) #12 ARC (ENSG00000198576) ADGRB1 (ENSG00000181790) #13 TSNARE1 (ENSG00000171045) #14 C8orf90 (ENSG00000226490) MROH5 (ENSG00000226807) #16 PTP4A3 (ENSG00000184489) #17 GPR20 (ENSG00000204882) SLC45A4 (ENSG00000022567) #18 DENND3 (ENSG00000105339) #20 PTK2 (ENSG00000169398) #22 AGO2 (ENSG00000123908) #23 CHRAC1 (ENSG00000104472) #24 TRAPPC9 (ENSG00000167632) #27 KCNK9 (ENSG00000169427) #28 COL22A1 (ENSG00000169436) #29 FAM135B (ENSG00000147724) #30 KHDRBS3 (ENSG00000131773) #32 ZFAT (ENSG00000066827) #33 ST3GAL1 (ENSG00000008513) #34 NDRG1 (ENSG00000104419) #36 CCN4 (ENSG00000104415) #37 SLA (ENSG00000155926) TG (ENSG00000042832) PHF20L1 (ENSG00000129292) TMEM71 (ENSG00000165071) Gorilla MODERN SPECIES 21 THEM6 (ENSGGOG00000002369) #9 LY6K (ENSGGOG00000003816) #10 PSCA (ENSGGOG00000003814) #11 JRK (ENSGGOG00000027151) #12 ARC (ENSGGOG00000004690) ADGRB1 (ENSGGOG00000008974) #13 TSNARE1 (ENSGGOG00000036935) #14 ENSGGOG00000042067 C8orf90 (ENSGGOG00000027364) PTP4A3 (ENSGGOG00000037356) #17 GPR20 (ENSGGOG00000010614) ENSGGOG00000024382 #19 SLC45A4 (ENSGGOG00000008028) #18 DENND3 (ENSGGOG00000008013) #20 ENSGGOG00000041196 #21 PTK2 (ENSGGOG00000011147) #22 AGO2 (ENSGGOG00000011412) #23 ENSGGOG00000040367 #24 ENSGGOG00000037266 ENSGGOG00000042061 ##26 TRAPPC9 (ENSGGOG00000002105) #27 ENSGGOG00000042932 KCNK9 (ENSGGOG00000037517) #28 COL22A1 (ENSGGOG00000010041) #29 FAM135B (ENSGGOG00000007384) #30 ENSGGOG00000036996 #31 ENSGGOG00000041443 #31 KHDRBS3 (ENSGGOG00000000940) #32 ZFAT (ENSGGOG00000007362) #33 ST3GAL1 (ENSGGOG00000022531) #34 ENSGGOG00000043736 ##35 Cercopithecidae ANCESTRAL SPECIES 14 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 #21 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Cercopithecinae ANCESTRAL SPECIES 16 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 #21 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Vervet Monkey MODERN SPECIES 27 SLURP1 (ENSCSAG00000009223) #8 THEM6 (ENSCSAG00000009228) #9 LY6K (ENSCSAG00000009240) #10 PSCA (ENSCSAG00000009257) #11 JRK (ENSCSAG00000018632) #12 ARC (ENSCSAG00000018631) ADGRB1 (ENSCSAG00000009366) #13 TSNARE1 (ENSCSAG00000009477) #14 C8orf90 (ENSCSAG00000009489) MROH5 (ENSCSAG00000009511) #16 PTP4A3 (ENSCSAG00000009539) #17 GPR20 (ENSCSAG00000018621) ENSCSAG00000009544 SLC45A4 (ENSCSAG00000009549) #18 DENND3 (ENSCSAG00000009555) #20 PTK2 (ENSCSAG00000009564) #22 AGO2 (ENSCSAG00000009574) #23 CHRAC1 (ENSCSAG00000009577) #24 TRAPPC9 (ENSCSAG00000009603) #27 KCNK9 (ENSCSAG00000009614) #28 ENSCSAG00000009743 FAM135B (ENSCSAG00000009776) #30 KHDRBS3 (ENSCSAG00000009815) #32 ZFAT (ENSCSAG00000009828) #33 ST3GAL1 (ENSCSAG00000009838) #34 NDRG1 (ENSCSAG00000009841) #36 CCN4 (ENSCSAG00000009848) #37 SLA (ENSCSAG00000009852) TG (ENSCSAG00000009878) PHF20L1 (ENSCSAG00000009894) TMEM71 (ENSCSAG00000009905) Cercopithecinae_a ANCESTRAL SPECIES 15 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 #21 ENSGT00940000155239 #23 ENSGT00910000147568 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Cercopithecinae_b ANCESTRAL SPECIES 9 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 #21 ENSGT00940000155239 #23 ENSGT00910000147568 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159300 ENSGT00940000159104 Olive baboon MODERN SPECIES 18 LY6K (ENSPANG00000044276) #10 PSCA (ENSPANG00000005745) #11 JRK (ENSPANG00000009437) #12 ARC (ENSPANG00000002588) ADGRB1 (ENSPANG00000015392) #13 ENSPANG00000017580 #14 C8orf90 (ENSPANG00000012866) MROH5 (ENSPANG00000008664) #16 ENSPANG00000030593 #17 GPR20 (ENSPANG00000006579) SLC45A4 (ENSPANG00000025488) #18 DENND3 (ENSPANG00000006229) #20 ENSPANG00000043996 ENSPANG00000041422 ENSPANG00000035712 #21 PTK2 (ENSPANG00000015685) #22 AGO2 (ENSPANG00000005604) #23 CHRAC1 (ENSPANG00000018908) #24 TRAPPC9 (ENSPANG00000006964) #27 KCNK9 (ENSPANG00000016981) #28 COL22A1 (ENSPANG00000007983) #29 FAM135B (ENSPANG00000019753) #30 ENSPANG00000037515 ENSPANG00000048695 ENSPANG00000042935 KHDRBS3 (ENSPANG00000006134) #32 ENSPANG00000048134 ZFAT (ENSPANG00000017457) #33 ST3GAL1 (ENSPANG00000021484) #34 NDRG1 (ENSPANG00000026080) #36 CCN4 (ENSPANG00000015800) #37 Cercopithecinae_d ANCESTRAL SPECIES 72 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00910000147810 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 #21 ENSGT00940000155239 #23 ENSGT00910000147568 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00910000147964 Drill MODERN SPECIES 1032 C8orf90 (ENSMLEG00000033766) MROH5 (ENSMLEG00000042913) #16 PTP4A3 (ENSMLEG00000041684) #17 GPR20 (ENSMLEG00000012223) SLC45A4 (ENSMLEG00000040522) #18 ENSMLEG00000022991 DENND3 (ENSMLEG00000033267) #20 ENSMLEG00000043742 #21 PTK2 (ENSMLEG00000030892) #22 AGO2 (ENSMLEG00000038874) #23 CHRAC1 (ENSMLEG00000040398) #24 TRAPPC9 (ENSMLEG00000027613) #27 ENSMLEG00000024566 Sooty mangabey MODERN SPECIES 586 THEM6 (ENSCATG00000042993) #9 LY6K (ENSCATG00000043689) #10 PSCA (ENSCATG00000035662) #11 JRK (ENSCATG00000044794) #12 ARC (ENSCATG00000023773) ADGRB1 (ENSCATG00000030208) #13 TSNARE1 (ENSCATG00000030146) #14 C8orf90 (ENSCATG00000040128) MROH5 (ENSCATG00000034124) #16 PTP4A3 (ENSCATG00000036356) #17 GPR20 (ENSCATG00000000416) SLC45A4 (ENSCATG00000034875) #18 ENSCATG00000019758 DENND3 (ENSCATG00000043316) #20 ENSCATG00000042845 #21 PTK2 (ENSCATG00000015054) #22 AGO2 (ENSCATG00000038820) #23 ENSCATG00000045042 CHRAC1 (ENSCATG00000036088) #24 TRAPPC9 (ENSCATG00000037076) #27 KCNK9 (ENSCATG00000044562) #28 ENSCATG00000016126 Macaca ANCESTRAL SPECIES 14 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 #21 ENSGT00940000155239 #23 ENSGT00910000147568 ENSGT00510000048543 #24 ENSGT00910000148229 #25 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00910000147964 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 Pig-tailed macaque MODERN SPECIES 146 THEM6 (ENSMNEG00000037253) #9 LY6K (ENSMNEG00000035301) #10 PSCA (ENSMNEG00000031685) #11 JRK (ENSMNEG00000043958) #12 ARC (ENSMNEG00000031158) ADGRB1 (ENSMNEG00000036808) #13 TSNARE1 (ENSMNEG00000042330) #14 ENSMNEG00000030812 C8orf90 (ENSMNEG00000034800) MROH5 (ENSMNEG00000029692) #16 PTP4A3 (ENSMNEG00000041873) #17 GPR20 (ENSMNEG00000004897) SLC45A4 (ENSMNEG00000024497) #18 DENND3 (ENSMNEG00000041197) #20 ENSMNEG00000033517 #21 PTK2 (ENSMNEG00000035528) #22 AGO2 (ENSMNEG00000019904) #23 ENSMNEG00000028578 CHRAC1 (ENSMNEG00000042914) #24 ENSMNEG00000042221 #25 TRAPPC9 (ENSMNEG00000029776) #27 KCNK9 (ENSMNEG00000031135) #28 ENSMNEG00000021185 Macaca_a ANCESTRAL SPECIES 16 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 #21 ENSGT00940000155239 #23 ENSGT00940000161627.a.b.b.a.a.a ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00910000147964 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT01100000263543.a.g.b.b.b.b.c.a.a ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 Rhesus MODERN SPECIES 18 SLURP1 (ENSMMUG00000018303) #8 THEM6 (ENSMMUG00000042112) #9 LY6K (ENSMMUG00000019458) #10 PSCA (ENSMMUG00000028899) #11 JRK (ENSMMUG00000022452) #12 ARC (ENSMMUG00000018519) ADGRB1 (ENSMMUG00000019877) #13 TSNARE1 (ENSMMUG00000001432) #14 ENSMMUG00000052421 C8orf90 (ENSMMUG00000055363) MROH5 (ENSMMUG00000028901) #16 PTP4A3 (ENSMMUG00000019392) #17 GPR20 (ENSMMUG00000049586) SLC45A4 (ENSMMUG00000013579) #18 DENND3 (ENSMMUG00000013578) #20 PTK2 (ENSMMUG00000002336) #22 AGO2 (ENSMMUG00000008045) #23 ENSMMUG00000056225 CHRAC1 (ENSMMUG00000057448) #24 ENSMMUG00000065332 TRAPPC9 (ENSMMUG00000048066) #27 ENSMMUG00000063726 KCNK9 (ENSMMUG00000045821) #28 ENSMMUG00000045425 COL22A1 (ENSMMUG00000047643) #29 ENSMMUG00000054706 ENSMMUG00000050990 FAM135B (ENSMMUG00000020326) #30 KHDRBS3 (ENSMMUG00000022248) #32 ZFAT (ENSMMUG00000004918) #33 ENSMMUG00000058738 Crab-eating macaque MODERN SPECIES 18 ENSMFAG00000003844 ENSMFAG00000037171 ##11 ENSMFAG00000042555 #8 THEM6 (ENSMFAG00000057966) #9 LY6K (ENSMFAG00000061014) #10 PSCA (ENSMFAG00000061175) #11 JRK (ENSMFAG00000004225) #12 ADGRB1 (ENSMFAG00000032171) #13 TSNARE1 (ENSMFAG00000044811) #14 MROH5 (ENSMFAG00000031443) #16 ENSMFAG00000045266 #17 GPR20 (ENSMFAG00000051571) SLC45A4 (ENSMFAG00000042422) #18 DENND3 (ENSMFAG00000034459) #20 ENSMFAG00000042048 #21 PTK2 (ENSMFAG00000001164) #22 AGO2 (ENSMFAG00000015384) #23 ENSMFAG00000058355 CHRAC1 (ENSMFAG00000029360) #24 ENSMFAG00000062151 TRAPPC9 (ENSMFAG00000044625) #27 KCNK9 (ENSMFAG00000060542) #28 ENSMFAG00000049195 ENSMFAG00000030525 ENSMFAG00000059291 FAM135B (ENSMFAG00000045015) #30 ENSMFAG00000062756 KHDRBS3 (ENSMFAG00000041845) #32 ENSMFAG00000047187 ZFAT (ENSMFAG00000041283) #33 ENSMFAG00000056273 Rhinopithecus ANCESTRAL SPECIES 20 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000170377 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00910000146911 #21 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00980000199292 ENSGT00390000006486 #27 ENSGT00940000159791 #28 Golden snub-nosed monkey MODERN SPECIES 2524 SLURP1 (ENSRROG00000041555) #8 THEM6 (ENSRROG00000009540) #9 ENSRROG00000036654 PSCA (ENSRROG00000003785) #11 JRK (ENSRROG00000032153) #12 ARC (ENSRROG00000024856) ADGRB1 (ENSRROG00000029062) #13 TSNARE1 (ENSRROG00000040938) #14 C8orf90 (ENSRROG00000038712) MROH5 (ENSRROG00000033590) #16 PTP4A3 (ENSRROG00000036049) #17 GPR20 (ENSRROG00000008595) SLC45A4 (ENSRROG00000037530) #18 DENND3 (ENSRROG00000030728) #20 ENSRROG00000043385 #21 PTK2 (ENSRROG00000039869) #22 AGO2 (ENSRROG00000003162) #23 CHRAC1 (ENSRROG00000030598) #24 Black snub-nosed monkey MODERN SPECIES 1211 SLURP1 (ENSRBIG00000044635) #8 THEM6 (ENSRBIG00000017304) #9 ENSRBIG00000007353 PSCA (ENSRBIG00000035552) #11 JRK (ENSRBIG00000030182) #12 ARC (ENSRBIG00000005692) ADGRB1 (ENSRBIG00000039356) #13 TSNARE1 (ENSRBIG00000034038) #14 C8orf90 (ENSRBIG00000034213) MROH5 (ENSRBIG00000042905) #16 PTP4A3 (ENSRBIG00000035342) #17 GPR20 (ENSRBIG00000012417) SLC45A4 (ENSRBIG00000034659) #18 DENND3 (ENSRBIG00000041826) #20 ENSRBIG00000041483 #21 PTK2 (ENSRBIG00000028864) #22 AGO2 (ENSRBIG00000028225) #23 CHRAC1 (ENSRBIG00000042659) #24 ENSRBIG00000041791 TRAPPC9 (ENSRBIG00000032901) #27 KCNK9 (ENSRBIG00000034302) #28 Platyrrhini ANCESTRAL SPECIES 17 ENSGT00940000164325 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C.j #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.a #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000167737 ENSGT00940000154158.k.b ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159300 ENSGT00940000159104 Cebidae ANCESTRAL SPECIES 19 ENSGT00940000164325 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000159966.B #10 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C.j #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.a #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000167737 ENSGT00940000154158.k.b ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159300 ENSGT00940000159104 Cebidae_a ANCESTRAL SPECIES 150 ENSGT00940000155784.C.i #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.a #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 Capuchin MODERN SPECIES 284 SYTL5 (ENSCCAG00000032709) SRPX (ENSCCAG00000025497) ENSCCAG00000021581 #20 PTK2 (ENSCCAG00000025146) #22 AGO2 (ENSCCAG00000035031) #23 ENSCCAG00000033163 #24 ENSCCAG00000022042 TRAPPC9 (ENSCCAG00000030541) #27 KCNK9 (ENSCCAG00000024965) #28 ENSCCAG00000021082 ENSCCAG00000032083 Bolivian squirrel monkey MODERN SPECIES 195 LYNX1 (ENSSBOG00000024857) SLURP2 (ENSSBOG00000035510) LYPD2 (ENSSBOG00000022892) #7 SLURP1 (ENSSBOG00000025334) #8 THEM6 (ENSSBOG00000027066) #9 LY6K (ENSSBOG00000021017) #10 PSCA (ENSSBOG00000024255) #11 JRK (ENSSBOG00000024810) #12 ARC (ENSSBOG00000009916) ADGRB1 (ENSSBOG00000012102) #13 TSNARE1 (ENSSBOG00000027290) #14 MROH5 (ENSSBOG00000028055) #16 PTP4A3 (ENSSBOG00000034074) #17 SLC45A4 (ENSSBOG00000021245) #18 DENND3 (ENSSBOG00000016014) #20 PTK2 (ENSSBOG00000021376) #22 Marmoset MODERN SPECIES 7 LY6K (ENSCJAG00000021484) #10 ENSCJAG00000062378 #11 JRK (ENSCJAG00000021476) #12 ARC (ENSCJAG00000012137) ADGRB1 (ENSCJAG00000010346) #13 ENSCJAG00000010357 #14 ENSCJAG00000083554 PTP4A3 (ENSCJAG00000071027) #17 GPR20 (ENSCJAG00000045235) SLC45A4 (ENSCJAG00000003889) #18 ENSCJAG00000052747 ENSCJAG00000058694 ENSCJAG00000003842 #20 ENSCJAG00000078600 #20 ENSCJAG00000086765 PTK2 (ENSCJAG00000003921) #22 AGO2 (ENSCJAG00000004132) #23 ENSCJAG00000085338 #24 TRAPPC9 (ENSCJAG00000004191) #27 KCNK9 (ENSCJAG00000086842) #28 COL22A1 (ENSCJAG00000004235) #29 FAM135B (ENSCJAG00000004293) #30 ENSCJAG00000052211 ENSCJAG00000058137 ENSCJAG00000042146 ENSCJAG00000039030 ENSCJAG00000077043 ENSCJAG00000075019 ENSCJAG00000069964 ENSCJAG00000004331 #32 ZFAT (ENSCJAG00000004348) #33 Mas night monkey MODERN SPECIES 602 GPIHBP1 (ENSANAG00000021409) ##11 GLI4 (ENSANAG00000016700) ZNF696 (ENSANAG00000019329) RHPN1 (ENSANAG00000022794) MAFA (ENSANAG00000021123) ZC3H3 (ENSANAG00000018742) GSDMD (ENSANAG00000019900) MROH6 (ENSANAG00000034518) NAPRT (ENSANAG00000031068) ENSANAG00000019322 PYCR3 (ENSANAG00000025985) ENSANAG00000028633 ZNF623 (ENSANAG00000028785) SLC45A4 (ENSANAG00000032643) #18 DENND3 (ENSANAG00000031248) #20 PTK2 (ENSANAG00000035429) #22 AGO2 (ENSANAG00000027399) #23 CHRAC1 (ENSANAG00000032245) #24 TRAPPC9 (ENSANAG00000023163) #27 KCNK9 (ENSANAG00000020788) #28 COL22A1 (ENSANAG00000028860) #29 FAM135B (ENSANAG00000024544) #30 ENSANAG00000021967 Tarsier MODERN SPECIES 1800 PTK2 (ENSTSYG00000008819) #22 Strepsirrhini ANCESTRAL SPECIES 15 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Bushbaby MODERN SPECIES 177 ENSOGAG00000032664 #16 PTP4A3 (ENSOGAG00000013936) #17 ENSOGAG00000034723 GPR20 (ENSOGAG00000029183) SLC45A4 (ENSOGAG00000008796) #18 DENND3 (ENSOGAG00000008776) #20 PTK2 (ENSOGAG00000008770) #22 AGO2 (ENSOGAG00000007933) #23 CHRAC1 (ENSOGAG00000007931) #24 ENSOGAG00000013931 #27 ENSOGAG00000026598 ENSOGAG00000032293 #27 KCNK9 (ENSOGAG00000013929) #28 COL22A1 (ENSOGAG00000012450) #29 FAM135B (ENSOGAG00000005671) #30 ENSOGAG00000028327 KHDRBS3 (ENSOGAG00000005150) #32 ZFAT (ENSOGAG00000014784) #33 ST3GAL1 (ENSOGAG00000016218) #34 NDRG1 (ENSOGAG00000016213) #36 CCN4 (ENSOGAG00000016211) #37 TG (ENSOGAG00000009756) Lemuriformes ANCESTRAL SPECIES 36 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Mouse lemur MODERN SPECIES 31 LY6D (ENSMICG00000035118) LYNX1 (ENSMICG00000046110) SLURP2 (ENSMICG00000045139) LYPD2 (ENSMICG00000000486) #7 SLURP1 (ENSMICG00000046668) #8 THEM6 (ENSMICG00000027716) #9 PSCA (ENSMICG00000036374) #11 JRK (ENSMICG00000041639) #12 ADGRB1 (ENSMICG00000015976) #13 TSNARE1 (ENSMICG00000000568) #14 C8orf90 (ENSMICG00000047940) MROH5 (ENSMICG00000028942) #16 PTP4A3 (ENSMICG00000030190) #17 SLC45A4 (ENSMICG00000010421) #18 DENND3 (ENSMICG00000010407) #20 PTK2 (ENSMICG00000004440) #22 AGO2 (ENSMICG00000004427) #23 CHRAC1 (ENSMICG00000042491) #24 TRAPPC9 (ENSMICG00000004399) #27 ENSMICG00000045662 ENSMICG00000037374 KCNK9 (ENSMICG00000004397) #28 COL22A1 (ENSMICG00000005224) #29 FAM135B (ENSMICG00000005212) #30 UBE3A (ENSMICG00000027572) ENSMICG00000037691 ATP10A (ENSMICG00000001113) GABRB3 (ENSMICG00000027069) GABRA5 (ENSMICG00000000032) GABRG3 (ENSMICG00000000033) ENSMICG00000027022 Lemuriformes_a ANCESTRAL SPECIES 40 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000168748 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Coquerels sifaka MODERN SPECIES 398 LY6D (ENSPCOG00000010018) LYNX1 (ENSPCOG00000023400) SLURP2 (ENSPCOG00000015131) LYPD2 (ENSPCOG00000022486) #7 SLURP1 (ENSPCOG00000012662) #8 THEM6 (ENSPCOG00000020900) #9 PSCA (ENSPCOG00000015330) #11 JRK (ENSPCOG00000026070) #12 ADGRB1 (ENSPCOG00000021749) #13 TSNARE1 (ENSPCOG00000020528) #14 C8orf90 (ENSPCOG00000022315) MROH5 (ENSPCOG00000015704) #16 PTP4A3 (ENSPCOG00000018943) #17 SLC45A4 (ENSPCOG00000019648) #18 DENND3 (ENSPCOG00000018459) #20 PTK2 (ENSPCOG00000025086) #22 AGO2 (ENSPCOG00000023047) #23 CHRAC1 (ENSPCOG00000021396) #24 ENSPCOG00000020151 TRAPPC9 (ENSPCOG00000010829) #27 KCNK9 (ENSPCOG00000019979) #28 ENSPCOG00000023237 ENSPCOG00000000504 FAM135B (ENSPCOG00000020978) #30 KHDRBS3 (ENSPCOG00000023667) #32 ZFAT (ENSPCOG00000025199) #33 ST3GAL1 (ENSPCOG00000024012) #34 NDRG1 (ENSPCOG00000018573) #36 CCN4 (ENSPCOG00000019770) #37 SLA (ENSPCOG00000010906) TG (ENSPCOG00000012664) Greater bamboo lemur DUPLICATION Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 549 ADGRB1 (ENSPSMG00000005190) #13 TSNARE1 (ENSPSMG00000005078) #14 ENSPSMG00000005063 #16 PTP4A3 (ENSPSMG00000005053) #17 GPR20 (ENSPSMG00000005025) SLC45A4 (ENSPSMG00000005020) #18 DENND3 (ENSPSMG00000004961) #20 ENSPSMG00000004909 #22 ENSPSMG00000004896 #22 Greater bamboo lemur MODERN SPECIES 549 ADGRB1 (ENSPSMG00000005190) #13 TSNARE1 (ENSPSMG00000005078) #14 ENSPSMG00000005063 #16 PTP4A3 (ENSPSMG00000005053) #17 GPR20 (ENSPSMG00000005025) SLC45A4 (ENSPSMG00000005020) #18 DENND3 (ENSPSMG00000004961) #20 ENSPSMG00000004909 #22 ENSPSMG00000004896 #22 Greater bamboo lemur MODERN SPECIES 2655 ENSPSMG00000004879 #22 Euarchontoglires_A ANCESTRAL SPECIES 19 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.e.b Tree shrew MODERN SPECIES 1033 PTK2 (ENSTBEG00000003660) #22 ENSTBEG00000003401 #23 Glires ANCESTRAL SPECIES 20 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000177637 Lagomorpha ANCESTRAL SPECIES ENSGT00940000155113.a.a #22 Pika MODERN SPECIES 2478 PTK2 (ENSOPRG00000013154) #22 Rabbit DUPLICATION Rabbit MODERN SPECIES 14 IMPA1 (ENSOCUG00000014535) ENSOCUG00000035758 SNX16 (ENSOCUG00000023666) FABP12 (ENSOCUG00000013189) ENSOCUG00000007445 FABP5 (ENSOCUG00000010425) PAG1 (ENSOCUG00000014767) ENSOCUG00000023452 ZNF704 (ENSOCUG00000016504) ZBTB10 (ENSOCUG00000001857) ENSOCUG00000008247 MRPS28 (ENSOCUG00000000867) HEY1 (ENSOCUG00000016568) STMN2 (ENSOCUG00000008312) ENSOCUG00000000308 ENSOCUG00000035772 #22 IL7 (ENSOCUG00000029611) ZC2HC1A (ENSOCUG00000001124) PKIA (ENSOCUG00000021115) ENSOCUG00000024404 PEX2 (ENSOCUG00000017625) ENSOCUG00000036154 ZFHX4 (ENSOCUG00000001723) ENSOCUG00000025047 HNF4G (ENSOCUG00000012041) ENSOCUG00000021684 CRISPLD1 (ENSOCUG00000009616) PI15 (ENSOCUG00000022299) GDAP1 (ENSOCUG00000007700) JPH1 (ENSOCUG00000007692) ENSOCUG00000030927 Rabbit MODERN SPECIES 682 PTK2 (ENSOCUG00000003282) #22 Rodentia ANCESTRAL SPECIES 19 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Rodentia_B ANCESTRAL SPECIES 17 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Myomorpha ANCESTRAL SPECIES 18 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT01040000244443 ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Muroidea ANCESTRAL SPECIES 14 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT01040000244443 ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Muroidea_A ANCESTRAL SPECIES 9 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT01040000244443 ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Cricetidae ANCESTRAL SPECIES 10 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT01040000244443 ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Cricetinae ANCESTRAL SPECIES 3 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT01040000244443 ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 808 Slurp1 (ENSMAUG00000017663) #8 Them6 (ENSMAUG00000000073) #9 Psca (ENSMAUG00000019289) #11 Jrk (ENSMAUG00000009637) #12 Arc (ENSMAUG00000007812) Mroh4 (ENSMAUG00000016636) Adgrb1 (ENSMAUG00000017581) #13 Gm6569 (ENSMAUG00000013636) ENSMAUG00000012349 #16 Ptp4a3 (ENSMAUG00000014965) #17 Gpr20 (ENSMAUG00000016031) ENSMAUG00000012339 Slc45a4 (ENSMAUG00000012951) #18 Dennd3 (ENSMAUG00000012902) #20 ENSMAUG00000012475 #22 ENSMAUG00000004255 #22 Ago2 (ENSMAUG00000007785) #23 Chrac1 (ENSMAUG00000003929) #24 Trappc9 (ENSMAUG00000005781) #27 ENSMAUG00000006643 Kcnk9 (ENSMAUG00000004861) #28 Golden Hamster MODERN SPECIES 808 Lypd2 (ENSMAUG00000018339) #7 Slurp1 (ENSMAUG00000017663) #8 Them6 (ENSMAUG00000000073) #9 Psca (ENSMAUG00000019289) #11 Jrk (ENSMAUG00000009637) #12 Arc (ENSMAUG00000007812) Mroh4 (ENSMAUG00000016636) Adgrb1 (ENSMAUG00000017581) #13 Gm6569 (ENSMAUG00000013636) ENSMAUG00000012349 #16 Ptp4a3 (ENSMAUG00000014965) #17 Gpr20 (ENSMAUG00000016031) ENSMAUG00000012339 Slc45a4 (ENSMAUG00000012951) #18 Dennd3 (ENSMAUG00000012902) #20 ENSMAUG00000012475 #22 ENSMAUG00000004255 #22 Ago2 (ENSMAUG00000007785) #23 Chrac1 (ENSMAUG00000003929) #24 Trappc9 (ENSMAUG00000005781) #27 ENSMAUG00000006643 Kcnk9 (ENSMAUG00000004861) #28 Chinese hamster chok1gshd MODERN SPECIES 1 Slurp2 (ENSCGRG00001013691) Lypd2 (ENSCGRG00001013365) #7 Slurp1 (ENSCGRG00001015798) #8 Them6 (ENSCGRG00001015372) #9 Psca (ENSCGRG00001013251) #11 Jrk (ENSCGRG00001008321) #12 Arc (ENSCGRG00001010007) Mroh4 (ENSCGRG00001018940) Adgrb1 (ENSCGRG00001012492) #13 Gm6569 (ENSCGRG00001011043) ENSCGRG00001007998 #16 Ptp4a3 (ENSCGRG00001018579) #17 Gpr20 (ENSCGRG00001009487) Slc45a4 (ENSCGRG00001015280) #18 Dennd3 (ENSCGRG00001009394) #20 Ptk2 (ENSCGRG00001017616) #22 Ago2 (ENSCGRG00001013557) #23 Chrac1 (ENSCGRG00001017929) #24 Trappc9 (ENSCGRG00001017331) #27 Kcnk9 (ENSCGRG00001006436) #28 ENSCGRG00001009509 ENSCGRG00001008804 Or2j3 (ENSCGRG00001009983) ENSCGRG00001010145 ENSCGRG00001008825 ENSCGRG00001009632 Or2h15 (ENSCGRG00001007379) ENSCGRG00001008054 ENSCGRG00001007593 ENSCGRG00001014302 ENSCGRG00001009752 Cricetidae_B ANCESTRAL SPECIES 6 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Prairie vole MODERN SPECIES 2 Slurp2 (ENSMOCG00000005277) Lypd2 (ENSMOCG00000018807) #7 Slurp1 (ENSMOCG00000019456) #8 Them6 (ENSMOCG00000022648) #9 Psca (ENSMOCG00000022772) #11 Jrk (ENSMOCG00000011136) #12 Arc (ENSMOCG00000014212) Mroh4 (ENSMOCG00000000343) Adgrb1 (ENSMOCG00000016067) #13 Gm6569 (ENSMOCG00000012239) ENSMOCG00000008614 #16 Ptp4a3 (ENSMOCG00000018999) #17 Gpr20 (ENSMOCG00000003252) Slc45a4 (ENSMOCG00000000762) #18 Dennd3 (ENSMOCG00000010331) #20 Ptk2 (ENSMOCG00000020779) #22 Ago2 (ENSMOCG00000000300) #23 ENSMOCG00000019826 Trappc9 (ENSMOCG00000009140) #27 Kcnk9 (ENSMOCG00000006383) #28 Col22a1 (ENSMOCG00000018105) ENSMOCG00000002707 #30 ENSMOCG00000003737 #30 Khdrbs3 (ENSMOCG00000020954) #32 Zfat (ENSMOCG00000018121) #33 St3gal1 (ENSMOCG00000000379) #34 Ndrg1 (ENSMOCG00000012344) #36 Ccn4 (ENSMOCG00000012019) #37 Tg (ENSMOCG00000022735) Sla (ENSMOCG00000020997) Phf20l1 (ENSMOCG00000021213) Northern American deer mouse MODERN SPECIES 12 Lypd2 (ENSPEMG00000011523) #7 Slurp1 (ENSPEMG00000025990) #8 Them6 (ENSPEMG00000014387) #9 Psca (ENSPEMG00000018490) #11 Jrk (ENSPEMG00000029676) #12 Arc (ENSPEMG00000017068) Mroh4 (ENSPEMG00000003300) ENSPEMG00000013061 #13 ENSPEMG00000027795 Gm6569 (ENSPEMG00000019855) ENSPEMG00000020041 #16 Ptp4a3 (ENSPEMG00000019413) #17 Gpr20 (ENSPEMG00000015627) Slc45a4 (ENSPEMG00000011925) #18 Dennd3 (ENSPEMG00000020034) #20 Ptk2 (ENSPEMG00000019854) #22 Ago2 (ENSPEMG00000008137) #23 ENSPEMG00000024935 Chrac1 (ENSPEMG00000025421) #24 Trappc9 (ENSPEMG00000019785) #27 Kcnk9 (ENSPEMG00000030534) #28 Col22a1 (ENSPEMG00000030858) Fam135b (ENSPEMG00000019395) #30 Khdrbs3 (ENSPEMG00000010099) #32 Zfat (ENSPEMG00000016138) #33 ENSPEMG00000009860 St3gal1 (ENSPEMG00000026966) #34 Ndrg1 (ENSPEMG00000000640) #36 Ccn4 (ENSPEMG00000018230) #37 Sla (ENSPEMG00000017713) Tg (ENSPEMG00000010025) Murinae ANCESTRAL SPECIES 10 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Mus ANCESTRAL SPECIES 11 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Mus_A ANCESTRAL SPECIES 13 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239.o.b #23 ENSGT00960000192853 ENSGT00940000155239.o.a #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Mus_B ANCESTRAL SPECIES 12 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239.o.b #23 ENSGT00960000192853 ENSGT00940000155239.o.a #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Mouse MODERN SPECIES 6 Slurp2 (ENSMUSG00000075605) Lypd2 (ENSMUSG00000022595) #7 Slurp1 (ENSMUSG00000022596) #8 Them6 (ENSMUSG00000056665) #9 Psca (ENSMUSG00000022598) #11 Jrk (ENSMUSG00000046380) #12 Arc (ENSMUSG00000022602) Mroh4 (ENSMUSG00000022603) Adgrb1 (ENSMUSG00000034730) #13 Gm6569 (ENSMUSG00000086361) Mroh5 (ENSMUSG00000072487) #16 Ptp4a3 (ENSMUSG00000059895) #17 Gpr20 (ENSMUSG00000045281) Slc45a4 (ENSMUSG00000079020) #18 Dennd3 (ENSMUSG00000036661) #20 Ptk2 (ENSMUSG00000022607) #22 Ago2 (ENSMUSG00000036698) #23 Chrac1 (ENSMUSG00000068391) #24 Trappc9 (ENSMUSG00000047921) #27 Kcnk9 (ENSMUSG00000036760) #28 Col22a1 (ENSMUSG00000079022) Fam135b (ENSMUSG00000036800) #30 Khdrbs3 (ENSMUSG00000022332) #32 Zfat (ENSMUSG00000022335) #33 St3gal1 (ENSMUSG00000013846) #34 Ndrg1 (ENSMUSG00000005125) #36 Ccn4 (ENSMUSG00000005124) #37 Sla (ENSMUSG00000022372) Tg (ENSMUSG00000053469) Phf20l1 (ENSMUSG00000072501) Tmem71 (ENSMUSG00000036944) Mus_C ANCESTRAL SPECIES 28 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239.o.b #23 ENSGT00960000192853 ENSGT00940000155239.p #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 spretus MODERN SPECIES 6 Slurp2 (MGP_SPRETEiJ_G0020775) Lypd2 (MGP_SPRETEiJ_G0020774) #7 Slurp1 (MGP_SPRETEiJ_G0020773) #8 Them6 (MGP_SPRETEiJ_G0020772) #9 Psca (MGP_SPRETEiJ_G0020771) #11 Jrk (MGP_SPRETEiJ_G0020770) #12 Arc (MGP_SPRETEiJ_G0020769) Mroh4 (MGP_SPRETEiJ_G0020768) MGP_SPRETEiJ_G0020767 #13 Gm6569 (MGP_SPRETEiJ_G0020766) MGP_SPRETEiJ_G0020765 #16 Ptp4a3 (MGP_SPRETEiJ_G0020764) #17 Gpr20 (MGP_SPRETEiJ_G0020763) Slc45a4 (MGP_SPRETEiJ_G0020762) #18 Dennd3 (MGP_SPRETEiJ_G0020761) #20 Ptk2 (MGP_SPRETEiJ_G0020760) #22 Ago2 (MGP_SPRETEiJ_G0020759) #23 Chrac1 (MGP_SPRETEiJ_G0020758) #24 Trappc9 (MGP_SPRETEiJ_G0020757) #27 Kcnk9 (MGP_SPRETEiJ_G0020756) #28 Col22a1 (MGP_SPRETEiJ_G0020755) Fam135b (MGP_SPRETEiJ_G0020754) #30 Khdrbs3 (MGP_SPRETEiJ_G0020753) #32 Zfat (MGP_SPRETEiJ_G0020752) #33 St3gal1 (MGP_SPRETEiJ_G0020751) #34 Ndrg1 (MGP_SPRETEiJ_G0020750) #36 Ccn4 (MGP_SPRETEiJ_G0020749) #37 MGP_SPRETEiJ_G0020748 Tg (MGP_SPRETEiJ_G0020747) Phf20l1 (MGP_SPRETEiJ_G0020746) Tmem71 (MGP_SPRETEiJ_G0020745) Steppe mouse MODERN SPECIES 2986 Gm6569 (ENSMSIG00000018810) Mroh5 (ENSMSIG00000018827) #16 Ptp4a3 (ENSMSIG00000018977) #17 Gpr20 (ENSMSIG00000019071) Slc45a4 (ENSMSIG00000019078) #18 Dennd3 (ENSMSIG00000019118) #20 Ptk2 (ENSMSIG00000019258) #22 ENSMSIG00000019719 #23 ENSMSIG00000019739 Chrac1 (ENSMSIG00000019743) #24 Trappc9 (ENSMSIG00000019764) #27 ENSMSIG00000020555 #28 Ryukyu mouse MODERN SPECIES 6 Slurp2 (MGP_CAROLIEiJ_G0019877) Lypd2 (MGP_CAROLIEiJ_G0019876) #7 Slurp1 (MGP_CAROLIEiJ_G0019875) #8 Them6 (MGP_CAROLIEiJ_G0019874) #9 Psca (MGP_CAROLIEiJ_G0019873) #11 Jrk (MGP_CAROLIEiJ_G0019872) #12 Arc (MGP_CAROLIEiJ_G0019871) Mroh4 (MGP_CAROLIEiJ_G0019870) Adgrb1 (MGP_CAROLIEiJ_G0019869) #13 Gm6569 (MGP_CAROLIEiJ_G0019868) MGP_CAROLIEiJ_G0019867 #16 Ptp4a3 (MGP_CAROLIEiJ_G0019866) #17 Gpr20 (MGP_CAROLIEiJ_G0019865) Slc45a4 (MGP_CAROLIEiJ_G0019864) #18 Dennd3 (MGP_CAROLIEiJ_G0019863) #20 Ptk2 (MGP_CAROLIEiJ_G0019862) #22 Ago2 (MGP_CAROLIEiJ_G0019861) #23 Chrac1 (MGP_CAROLIEiJ_G0019860) #24 Trappc9 (MGP_CAROLIEiJ_G0019859) #27 Kcnk9 (MGP_CAROLIEiJ_G0019858) #28 Col22a1 (MGP_CAROLIEiJ_G0019857) Fam135b (MGP_CAROLIEiJ_G0019856) #30 Khdrbs3 (MGP_CAROLIEiJ_G0019855) #32 Zfat (MGP_CAROLIEiJ_G0019854) #33 St3gal1 (MGP_CAROLIEiJ_G0019853) #34 Ndrg1 (MGP_CAROLIEiJ_G0019852) #36 Ccn4 (MGP_CAROLIEiJ_G0019851) #37 MGP_CAROLIEiJ_G0019850 Tg (MGP_CAROLIEiJ_G0019849) Phf20l1 (MGP_CAROLIEiJ_G0019848) Tmem71 (MGP_CAROLIEiJ_G0019847) Shrew mouse MODERN SPECIES 8 Slurp2 (MGP_PahariEiJ_G0019883) Lypd2 (MGP_PahariEiJ_G0019882) #7 Slurp1 (MGP_PahariEiJ_G0019881) #8 Them6 (MGP_PahariEiJ_G0019880) #9 Psca (MGP_PahariEiJ_G0019879) #11 Jrk (MGP_PahariEiJ_G0019878) #12 Arc (MGP_PahariEiJ_G0019877) Mroh4 (MGP_PahariEiJ_G0019876) Adgrb1 (MGP_PahariEiJ_G0019875) #13 Gm6569 (MGP_PahariEiJ_G0019874) MGP_PahariEiJ_G0019873 #16 Ptp4a3 (MGP_PahariEiJ_G0019872) #17 Gpr20 (MGP_PahariEiJ_G0019871) Slc45a4 (MGP_PahariEiJ_G0019870) #18 Dennd3 (MGP_PahariEiJ_G0019869) #20 Ptk2 (MGP_PahariEiJ_G0019868) #22 Ago2 (MGP_PahariEiJ_G0019867) #23 Chrac1 (MGP_PahariEiJ_G0019866) #24 Trappc9 (MGP_PahariEiJ_G0019865) #27 Kcnk9 (MGP_PahariEiJ_G0019864) #28 Col22a1 (MGP_PahariEiJ_G0019863) MGP_PahariEiJ_G0019862 Fam135b (MGP_PahariEiJ_G0019861) #30 Khdrbs3 (MGP_PahariEiJ_G0019860) #32 Zfat (MGP_PahariEiJ_G0019859) #33 St3gal1 (MGP_PahariEiJ_G0019858) #34 Ndrg1 (MGP_PahariEiJ_G0019857) #36 Ccn4 (MGP_PahariEiJ_G0019856) #37 Sla (MGP_PahariEiJ_G0019855) Tg (MGP_PahariEiJ_G0019854) Phf20l1 (MGP_PahariEiJ_G0019853) Rat MODERN SPECIES 17 Lypd2 (ENSRNOG00000006058) #7 Slurp1 (ENSRNOG00000005944) #8 Them6 (ENSRNOG00000005929) #9 Psca (ENSRNOG00000061376) #11 Jrk (ENSRNOG00000027238) #12 Arc (ENSRNOG00000043465) Mroh4 (ENSRNOG00000005382) Adgrb1 (ENSRNOG00000029450) #13 AABR07058413.1 (ENSRNOG00000037401) Gm6569 (ENSRNOG00000065138) Mroh5 (ENSRNOG00000032827) #16 Ptp4a3 (ENSRNOG00000007628) #17 Slc45a4 (ENSRNOG00000007818) #18 Dennd3 (ENSRNOG00000010794) #20 RGD1564268 (ENSRNOG00000059955) Ptk2 (ENSRNOG00000007916) #22 Ago2 (ENSRNOG00000008533) #23 Chrac1 (ENSRNOG00000009103) #24 Trappc9 (ENSRNOG00000027569) #27 Kcnk9 (ENSRNOG00000009265) #28 Col22a1 (ENSRNOG00000024824) Fam135b (ENSRNOG00000005159) #30 Rps19l1 (ENSRNOG00000031474) Khdrbs3 (ENSRNOG00000009539) #32 ENSRNOG00000070681 Zfat (ENSRNOG00000025140) #33 ENSRNOG00000067606 AABR07058284.1 (ENSRNOG00000062233) St3gal1 (ENSRNOG00000008209) #34 Ndrg1 (ENSRNOG00000007393) #36 Ccn4 (ENSRNOG00000007078) #37 Upper Galilee mountains blind mole rat MODERN SPECIES 1563 Ly6d (ENSNGAG00000019323) ENSNGAG00000002886 Lypd2 (ENSNGAG00000012150) #7 Slurp1 (ENSNGAG00000015613) #8 Them6 (ENSNGAG00000017349) #9 Psca (ENSNGAG00000018283) #11 Jrk (ENSNGAG00000000303) #12 Arc (ENSNGAG00000000562) Adgrb1 (ENSNGAG00000002210) #13 Gm6569 (ENSNGAG00000010718) Ptp4a3 (ENSNGAG00000012875) #17 Gpr20 (ENSNGAG00000013605) ENSNGAG00000015542 Slc45a4 (ENSNGAG00000016323) #18 Dennd3 (ENSNGAG00000002578) #20 Ptk2 (ENSNGAG00000012523) #22 Ago2 (ENSNGAG00000014556) #23 Chrac1 (ENSNGAG00000000333) #24 Trappc9 (ENSNGAG00000009281) #27 Kcnk9 (ENSNGAG00000015255) #28 ENSNGAG00000013443 #29 Lesser Egyptian jerboa MODERN SPECIES 223 ENSJJAG00000019212 #13 ENSJJAG00000019004 #13 Gm6569 (ENSJJAG00000018857) ENSJJAG00000013660 #16 Ptp4a3 (ENSJJAG00000013243) #17 Gpr20 (ENSJJAG00000011714) ENSJJAG00000013106 Slc45a4 (ENSJJAG00000013200) #18 Dennd3 (ENSJJAG00000011270) #20 ENSJJAG00000010072 Ptk2 (ENSJJAG00000004391) #22 Ago2 (ENSJJAG00000018712) #23 Chrac1 (ENSJJAG00000017631) #24 Trappc9 (ENSJJAG00000016725) #27 Kangaroo rat MODERN SPECIES 401 Ly6d (ENSDORG00000024972) Slurp2 (ENSDORG00000015171) Lypd2 (ENSDORG00000009417) #7 Slurp1 (ENSDORG00000009416) #8 ENSDORG00000028228 #9 Psca (ENSDORG00000023668) #11 Jrk (ENSDORG00000025733) #12 Arc (ENSDORG00000028670) Mroh4 (ENSDORG00000023974) ENSDORG00000005970 #13 ENSDORG00000024177 ENSDORG00000030230 #16 Ptp4a3 (ENSDORG00000015794) #17 ENSDORG00000028864 #18 Dennd3 (ENSDORG00000005645) #20 Ptk2 (ENSDORG00000014660) #22 Ago2 (ENSDORG00000011242) #23 Chrac1 (ENSDORG00000028444) #24 Trappc9 (ENSDORG00000001882) #27 Kcnk9 (ENSDORG00000001880) #28 Col22a1 (ENSDORG00000003304) ENSDORG00000028817 #30 ENSDORG00000006503 #30 Khdrbs3 (ENSDORG00000014595) #32 Zfat (ENSDORG00000007664) #33 St3gal1 (ENSDORG00000005921) #34 ENSDORG00000016104 #36 Ccn4 (ENSDORG00000025677) #37 ENSDORG00000023864 Sla (ENSDORG00000007617) ENSDORG00000029798 Rodentia_A ANCESTRAL SPECIES 18 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280.j #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Hystricomorpha ANCESTRAL SPECIES 12 ENSGT00940000164325 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280.j #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Hystricomorpha_a ANCESTRAL SPECIES 9 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280.j #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00940000158506 Hystricomorpha_b ANCESTRAL SPECIES 27 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280.j #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00940000158506 Degu DUPLICATION Degu MODERN SPECIES 145 LYPD2 (ENSODEG00000014915) #7 SLURP1 (ENSODEG00000015407) #8 THEM6 (ENSODEG00000014821) #9 PSCA (ENSODEG00000016160) #11 JRK (ENSODEG00000020132) #12 ARC (ENSODEG00000020293) ENSODEG00000014726 ENSODEG00000015115 ADGRB1 (ENSODEG00000014587) #13 C8orf90 (ENSODEG00000015406) ENSODEG00000014827 #16 PTP4A3 (ENSODEG00000014363) #17 GPR20 (ENSODEG00000020297) SLC45A4 (ENSODEG00000014926) #18 DENND3 (ENSODEG00000013810) #20 ENSODEG00000015216 #22 AGO2 (ENSODEG00000014145) #23 ENSODEG00000014549 #24 ENSODEG00000014521 TRAPPC9 (ENSODEG00000014700) #27 KCNK9 (ENSODEG00000015679) #28 ENSODEG00000020212 ENSODEG00000014662 COL22A1 (ENSODEG00000015226) #29 ENSODEG00000015548 #30 ENSODEG00000014642 ENSODEG00000014879 #30 Degu MODERN SPECIES 442 ENSODEG00000000458 #22 ENSODEG00000000433 Long-tailed chinchilla MODERN SPECIES 168 PTK2 (ENSCLAG00000001793) #22 AGO2 (ENSCLAG00000001381) #23 CHRAC1 (ENSCLAG00000001356) #24 TRAPPC9 (ENSCLAG00000004275) #27 KCNK9 (ENSCLAG00000003901) #28 COL22A1 (ENSCLAG00000002922) #29 FAM135B (ENSCLAG00000002324) #30 KHDRBS3 (ENSCLAG00000002164) #32 ZFAT (ENSCLAG00000001985) #33 ST3GAL1 (ENSCLAG00000002721) #34 NDRG1 (ENSCLAG00000002544) #36 CCN4 (ENSCLAG00000002478) #37 SLA (ENSCLAG00000002422) TG (ENSCLAG00000001570) PHF20L1 (ENSCLAG00000001398) ENSCLAG00000001275 Guinea pig MODERN SPECIES 17 LYNX1 (ENSCPOG00000039168) SLURP2 (ENSCPOG00000040257) SLURP1 (ENSCPOG00000032557) #8 THEM6 (ENSCPOG00000021643) #9 PSCA (ENSCPOG00000037123) #11 JRK (ENSCPOG00000024068) #12 ARC (ENSCPOG00000021539) ENSCPOG00000024726 ADGRB1 (ENSCPOG00000008233) #13 C8orf90 (ENSCPOG00000034694) ENSCPOG00000031866 #16 PTP4A3 (ENSCPOG00000039057) #17 GPR20 (ENSCPOG00000036801) ENSCPOG00000019277 #18 DENND3 (ENSCPOG00000006551) #20 PTK2 (ENSCPOG00000000923) #22 AGO2 (ENSCPOG00000010428) #23 CHRAC1 (ENSCPOG00000035581) #24 TRAPPC9 (ENSCPOG00000003396) #27 KCNK9 (ENSCPOG00000005816) #28 COL22A1 (ENSCPOG00000000650) #29 ENSCPOG00000032908 #30 ENSCPOG00000012989 #30 Naked mole-rat female MODERN SPECIES 1 ENSHGLG00000016723 LYPD2 (ENSHGLG00000018769) #7 SLURP1 (ENSHGLG00000039971) #8 THEM6 (ENSHGLG00000013642) #9 PSCA (ENSHGLG00000017427) #11 JRK (ENSHGLG00000042302) #12 ARC (ENSHGLG00000015257) ENSHGLG00000037200 ADGRB1 (ENSHGLG00000005458) #13 C8orf90 (ENSHGLG00000018605) PTP4A3 (ENSHGLG00000014998) #17 GPR20 (ENSHGLG00000020410) SLC45A4 (ENSHGLG00000011156) #18 DENND3 (ENSHGLG00000013884) #20 ENSHGLG00000006809 PTK2 (ENSHGLG00000011805) #22 ENSHGLG00000005548 #23 ENSHGLG00000045046 ENSHGLG00000043891 ENSHGLG00000005293 TRAPPC9 (ENSHGLG00000008781) #27 KCNK9 (ENSHGLG00000041028) #28 ENSHGLG00000015782 #29 ENSHGLG00000014953 #30 ENSHGLG00000021272 ENSHGLG00000045916 ENSHGLG00000006718 #32 ZFAT (ENSHGLG00000012551) #33 ENSHGLG00000021259 ST3GAL1 (ENSHGLG00000041464) #34 NDRG1 (ENSHGLG00000014089) #36 Sciuridae ANCESTRAL SPECIES 17 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280.j #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Marmotini ANCESTRAL SPECIES 10 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280.j #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215.f ENSGT00390000011144 Marmotini_b ANCESTRAL SPECIES 6 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280.j #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215.f ENSGT00390000011144 Arctic ground squirrel MODERN SPECIES 282 LYPD2 (ENSUPAG00010006856) #7 SLURP1 (ENSUPAG00010006841) #8 THEM6 (ENSUPAG00010006827) #9 PSCA (ENSUPAG00010006819) #11 JRK (ENSUPAG00010006807) #12 ARC (ENSUPAG00010006802) ENSUPAG00010006615 ADGRB1 (ENSUPAG00010006555) #13 ENSUPAG00010006551 #14 C8orf90 (ENSUPAG00010006543) ENSUPAG00010006496 #16 PTP4A3 (ENSUPAG00010006486) #17 GPR20 (ENSUPAG00010006477) SLC45A4 (ENSUPAG00010006464) #18 DENND3 (ENSUPAG00010006428) #20 PTK2 (ENSUPAG00010006311) #22 ENSUPAG00010006307 AGO2 (ENSUPAG00010006287) #23 CHRAC1 (ENSUPAG00010006278) #24 TRAPPC9 (ENSUPAG00010006121) #27 Squirrel MODERN SPECIES 70 ZFP41 (ENSSTOG00000022550) LY6H (ENSSTOG00000001914) ENSSTOG00000001472 LY6D (ENSSTOG00000016531) ENSSTOG00000022520 THEM6 (ENSSTOG00000022145) #9 PSCA (ENSSTOG00000008313) #11 JRK (ENSSTOG00000021183) #12 ARC (ENSSTOG00000005258) ADGRB1 (ENSSTOG00000027177) #13 ENSSTOG00000024244 #16 PTP4A3 (ENSSTOG00000019728) #17 GPR20 (ENSSTOG00000005890) SLC45A4 (ENSSTOG00000020502) #18 DENND3 (ENSSTOG00000011809) #20 PTK2 (ENSSTOG00000013107) #22 AGO2 (ENSSTOG00000008113) #23 CHRAC1 (ENSSTOG00000008105) #24 TRAPPC9 (ENSSTOG00000000039) #27 KCNK9 (ENSSTOG00000027592) #28 ENSSTOG00000019372 FAM135B (ENSSTOG00000013996) #30 KHDRBS3 (ENSSTOG00000008710) #32 ZFAT (ENSSTOG00000006903) #33 ST3GAL1 (ENSSTOG00000024282) #34 NDRG1 (ENSSTOG00000027200) #36 CCN4 (ENSSTOG00000024729) #37 ENSSTOG00000012423 SLA (ENSSTOG00000012453) PHF20L1 (ENSSTOG00000012416) TMEM71 (ENSSTOG00000022474) Alpin marmot MODERN SPECIES 18 ENSMMMG00000005836 LYPD2 (ENSMMMG00000005834) #7 SLURP1 (ENSMMMG00000005823) #8 THEM6 (ENSMMMG00000005816) #9 PSCA (ENSMMMG00000005803) #11 JRK (ENSMMMG00000005796) #12 ARC (ENSMMMG00000005789) ENSMMMG00000005762 ENSMMMG00000005725 #13 TSNARE1 (ENSMMMG00000005713) #14 ENSMMMG00000005683 #16 PTP4A3 (ENSMMMG00000005644) #17 GPR20 (ENSMMMG00000005632) SLC45A4 (ENSMMMG00000005608) #18 DENND3 (ENSMMMG00000005523) #20 PTK2 (ENSMMMG00000005381) #22 AGO2 (ENSMMMG00000005337) #23 CHRAC1 (ENSMMMG00000005325) #24 TRAPPC9 (ENSMMMG00000005137) #27 KCNK9 (ENSMMMG00000005117) #28 ENSMMMG00000004920 FAM135B (ENSMMMG00000004861) #30 ENSMMMG00000004798 KHDRBS3 (ENSMMMG00000004785) #32 ZFAT (ENSMMMG00000004348) #33 ST3GAL1 (ENSMMMG00000004307) #34 NDRG1 (ENSMMMG00000004288) #36 CCN4 (ENSMMMG00000004263) #37 SLA (ENSMMMG00000004139) TG (ENSMMMG00000004004) PHF20L1 (ENSMMMG00000003892) Eurasian red squirrel DUPLICATION Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005004569 #22 ENSSVLG00005004553 #22 ENSSVLG00005004513 ENSSVLG00005004498 ENSSVLG00005004488 ENSSVLG00005004462 ENSSVLG00005004447 ENSSVLG00005004423 ENSSVLG00005004354 ENSSVLG00005004345 ENSSVLG00005004326 ENSSVLG00005004312 ENSSVLG00005017769 ENSSVLG00005017749 H1-5 (ENSSVLG00005017730) ENSSVLG00005017713 Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005004569 #22 ENSSVLG00005004553 #22 ENSSVLG00005004513 ENSSVLG00005004498 ENSSVLG00005004488 ENSSVLG00005004462 ENSSVLG00005004447 ENSSVLG00005004423 ENSSVLG00005004354 ENSSVLG00005004345 ENSSVLG00005004326 ENSSVLG00005004312 ENSSVLG00005017769 ENSSVLG00005017749 H1-5 (ENSSVLG00005017730) ENSSVLG00005017713 ENSSVLG00005017687 Eurasian red squirrel MODERN SPECIES LYNX1 (ENSSVLG00005023135) LYPD2 (ENSSVLG00005023079) #7 SLURP1 (ENSSVLG00005023055) #8 THEM6 (ENSSVLG00005023036) #9 PSCA (ENSSVLG00005023011) #11 JRK (ENSSVLG00005022992) #12 ARC (ENSSVLG00005022979) ENSSVLG00005022713 ADGRB1 (ENSSVLG00005022303) #13 ENSSVLG00005022182 MROH5 (ENSSVLG00005021860) #16 PTP4A3 (ENSSVLG00005021774) #17 GPR20 (ENSSVLG00005021746) SLC45A4 (ENSSVLG00005021723) #18 ENSSVLG00005021625 ENSSVLG00005020362 #22 AGO2 (ENSSVLG00005019843) #23 CHRAC1 (ENSSVLG00005019735) #24 TRAPPC9 (ENSSVLG00005019480) #27 ENSSVLG00005019252 KCNK9 (ENSSVLG00005019190) #28 ENSSVLG00005018670 FAM135B (ENSSVLG00005018467) #30 ENSSVLG00005018282 #32 ZFAT (ENSSVLG00005017882) #33 ST3GAL1 (ENSSVLG00005017801) #34 NDRG1 (ENSSVLG00005017455) #36 CCN4 (ENSSVLG00005017264) #37 SLA (ENSSVLG00005016977) TG (ENSSVLG00005016366) PHF20L1 (ENSSVLG00005016179) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 55 ENSSVLG00005020462 #22 Eurasian red squirrel MODERN SPECIES 103 ENSSVLG00005015609 #22 Laurasiatheria ANCESTRAL SPECIES 63 ENSGT00970000197161 ENSGT00940000155113.a.a #22 ENSGT00970000197016 Laurasiatheria_a ANCESTRAL SPECIES 20 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT01040000240949 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Artiodactyla ANCESTRAL SPECIES 20 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT01040000240949 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Suina ANCESTRAL SPECIES 26 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT01040000240949 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Chacoan peccary MODERN SPECIES 114 GPR20 (ENSCWAG00000010586) SLC45A4 (ENSCWAG00000010563) #18 ENSCWAG00000010537 #20 ENSCWAG00000010492 #20 PTK2 (ENSCWAG00000009396) #22 AGO2 (ENSCWAG00000009168) #23 CHRAC1 (ENSCWAG00000009130) #24 TRAPPC9 (ENSCWAG00000008968) #27 KCNK9 (ENSCWAG00000008928) #28 COL22A1 (ENSCWAG00000007875) #29 FAM135B (ENSCWAG00000020207) #30 ENSCWAG00000020195 KHDRBS3 (ENSCWAG00000020158) #32 ZFAT (ENSCWAG00000020112) #33 ST3GAL1 (ENSCWAG00000020091) #34 NDRG1 (ENSCWAG00000020006) #36 CCN4 (ENSCWAG00000019971) #37 SLA (ENSCWAG00000019761) TG (ENSCWAG00000019633) PHF20L1 (ENSCWAG00000019548) Pig MODERN SPECIES 12 LYPD2 (ENSSSCG00000036119) #7 ENSSSCG00000049907 #8 THEM6 (ENSSSCG00000032063) #9 PSCA (ENSSSCG00000035372) #11 JRK (ENSSSCG00000037975) #12 ARC (ENSSSCG00000038965) ENSSSCG00000033726 ADGRB1 (ENSSSCG00000035891) #13 ENSSSCG00000050724 ENSSSCG00000036022 #14 MROH5 (ENSSSCG00000005928) #16 PTP4A3 (ENSSSCG00000036569) #17 GPR20 (ENSSSCG00000021284) SLC45A4 (ENSSSCG00000005930) #18 DENND3 (ENSSSCG00000030831) #20 PTK2 (ENSSSCG00000038397) #22 AGO2 (ENSSSCG00000005935) #23 CHRAC1 (ENSSSCG00000005933) #24 TRAPPC9 (ENSSSCG00000005934) #27 ENSSSCG00000045313 KCNK9 (ENSSSCG00000033397) #28 COL22A1 (ENSSSCG00000005938) #29 FAM135B (ENSSSCG00000005939) #30 KHDRBS3 (ENSSSCG00000005941) #32 ENSSSCG00000040767 ENSSSCG00000045339 ZFAT (ENSSSCG00000030947) #33 ST3GAL1 (ENSSSCG00000005943) #34 NDRG1 (ENSSSCG00000005944) #36 CCN4 (ENSSSCG00000005946) #37 TG (ENSSSCG00000005948) Artiodactyla_a ANCESTRAL SPECIES 20 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Camelidae ANCESTRAL SPECIES 19 ENSGT00940000164325 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT01000000221687 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00940000168748 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Arabian camel MODERN SPECIES 17 SLURP2 (ENSCDRG00005013602) ENSCDRG00005013509 #7 SLURP1 (ENSCDRG00005013458) #8 THEM6 (ENSCDRG00005013436) #9 ENSCDRG00005013386 JRK (ENSCDRG00005013365) #12 ARC (ENSCDRG00005013348) ENSCDRG00005013021 ADGRB1 (ENSCDRG00005011321) #13 ENSCDRG00005011015 #14 ENSCDRG00005010597 #16 PTP4A3 (ENSCDRG00005010470) #17 GPR20 (ENSCDRG00005010449) SLC45A4 (ENSCDRG00005010392) #18 DENND3 (ENSCDRG00005010232) #20 PTK2 (ENSCDRG00005009649) #22 AGO2 (ENSCDRG00005009405) #23 ENSCDRG00005009352 TRAPPC9 (ENSCDRG00005009058) #27 KCNK9 (ENSCDRG00005008973) #28 COL22A1 (ENSCDRG00005008680) #29 FAM135B (ENSCDRG00005008527) #30 KHDRBS3 (ENSCDRG00005008373) #32 ENSCDRG00005008302 ZFAT (ENSCDRG00005007628) #33 ST3GAL1 (ENSCDRG00005007522) #34 NDRG1 (ENSCDRG00005007109) #36 CCN4 (ENSCDRG00005007039) #37 SLA (ENSCDRG00005006863) TG (ENSCDRG00005006354) PHF20L1 (ENSCDRG00005006230) Alpaca MODERN SPECIES 1858 ENSVPAG00000007944 #22 Artiodactyla_b ANCESTRAL SPECIES 20 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240949 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Pecora ANCESTRAL SPECIES 20 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240949 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #27 ENSGT00970000194344 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Percora_a ANCESTRAL SPECIES 23 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240949 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #27 ENSGT00970000194344 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Bovidae ANCESTRAL SPECIES 22 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240949 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #27 ENSGT00970000194344 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Caprinae ANCESTRAL SPECIES 18 ENSGT00730000111571.`b.a ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #27 ENSGT00970000194344 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Goat MODERN SPECIES 5 LY6E (ENSCHIG00000005488) ##11 CYP11B1 (ENSCHIG00000012278) GML (ENSCHIG00000015469) ##10 ENSCHIG00000021920 LYNX1 (ENSCHIG00000014052) LYPD2 (ENSCHIG00000014595) #7 TSNARE1 (ENSCHIG00000023914) #14 ADGRB1 (ENSCHIG00000018848) #13 ENSCHIG00000009651 ARC (ENSCHIG00000007715) MROH5 (ENSCHIG00000021884) #16 PTP4A3 (ENSCHIG00000008896) #17 GPR20 (ENSCHIG00000008984) SLC45A4 (ENSCHIG00000021060) #18 DENND3 (ENSCHIG00000008841) #20 PTK2 (ENSCHIG00000013943) #22 AGO2 (ENSCHIG00000010156) #23 ENSCHIG00000017172 #24 TRAPPC9 (ENSCHIG00000012324) #27 KCNK9 (ENSCHIG00000022281) #28 FAM135B (ENSCHIG00000016457) #30 ENSCHIG00000019586 KHDRBS3 (ENSCHIG00000016533) #32 ZFAT (ENSCHIG00000013122) #33 ST3GAL1 (ENSCHIG00000021799) #34 NDRG1 (ENSCHIG00000015852) #36 CCN4 (ENSCHIG00000012315) #37 SLA (ENSCHIG00000017077) TG (ENSCHIG00000026405) PHF20L1 (ENSCHIG00000009054) TMEM71 (ENSCHIG00000013935) Rambouillet Sheep MODERN SPECIES 25 ENSOARG00020013707 LY6D (ENSOARG00020013889) ENSOARG00020013946 LYPD2 (ENSOARG00020013987) #7 SLURP1 (ENSOARG00020014023) #8 THEM6 (ENSOARG00020014092) #9 PSCA (ENSOARG00020014124) #11 ENSOARG00020014189 ARC (ENSOARG00020003055) ENSOARG00020003095 ADGRB1 (ENSOARG00020003350) #13 C8orf90 (ENSOARG00020003638) ENSOARG00020003672 #16 PTP4A3 (ENSOARG00020003791) #17 GPR20 (ENSOARG00020003852) PTK2 (ENSOARG00020004232) #22 AGO2 (ENSOARG00020005189) #23 CHRAC1 (ENSOARG00020005226) #24 TRAPPC9 (ENSOARG00020005244) #27 ENSOARG00020005279 KCNK9 (ENSOARG00020005293) #28 COL22A1 (ENSOARG00020005316) #29 FAM135B (ENSOARG00020005425) #30 ENSOARG00020005451 ENSOARG00020005461 KHDRBS3 (ENSOARG00020005495) #32 ZFAT (ENSOARG00020005657) #33 ST3GAL1 (ENSOARG00020005893) #34 NDRG1 (ENSOARG00020005943) #36 TG (ENSOARG00020006257) SLA (ENSOARG00020006379) Bovinae ANCESTRAL SPECIES 18 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240949 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT01080000258935 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Bos ANCESTRAL SPECIES 21 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240949 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT01080000258935 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Bos_b ANCESTRAL SPECIES 25 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240949 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215.f ENSGT00390000011144 Hybrid Bos Indicus MODERN SPECIES 5 SLURP1 (ENSBIXG00005030483) #8 THEM6 (ENSBIXG00005030488) #9 PSCA (ENSBIXG00005030492) #11 JRK (ENSBIXG00005030497) #12 ARC (ENSBIXG00005030501) ENSBIXG00005030522 ADGRB1 (ENSBIXG00005030562) #13 ENSBIXG00005030595 #14 C8orf90 (ENSBIXG00005030674) ENSBIXG00005030691 #16 PTP4A3 (ENSBIXG00005030720) #17 ENSBIXG00005030733 GPR20 (ENSBIXG00005030738) SLC45A4 (ENSBIXG00005030748) #18 DENND3 (ENSBIXG00005030786) #20 PTK2 (ENSBIXG00005030896) #22 AGO2 (ENSBIXG00005031025) #23 CHRAC1 (ENSBIXG00005031033) #24 TRAPPC9 (ENSBIXG00005031060) #27 ENSBIXG00005031093 #28 COL22A1 (ENSBIXG00005031109) #29 FAM135B (ENSBIXG00005031125) #30 KHDRBS3 (ENSBIXG00005031144) #32 ZFAT (ENSBIXG00005031165) #33 NDRG1 (ENSBIXG00005031191) #36 CCN4 (ENSBIXG00005031198) #37 TG (ENSBIXG00005031209) ENSBIXG00005031228 SLA (ENSBIXG00005031229) PHF20L1 (ENSBIXG00005031232) TMEM71 (ENSBIXG00005031248) Cow MODERN SPECIES 5 LYPD2 (ENSBTAG00000016210) #7 SLURP1 (ENSBTAG00000016209) #8 THEM6 (ENSBTAG00000005063) #9 PSCA (ENSBTAG00000047022) #11 JRK (ENSBTAG00000055204) #12 ARC (ENSBTAG00000021639) ENSBTAG00000026340 ADGRB1 (ENSBTAG00000006385) #13 TSNARE1 (ENSBTAG00000009974) #14 ENSBTAG00000046739 #16 PTP4A3 (ENSBTAG00000046467) #17 ENSBTAG00000050186 GPR20 (ENSBTAG00000015985) SLC45A4 (ENSBTAG00000008597) #18 DENND3 (ENSBTAG00000006132) #20 PTK2 (ENSBTAG00000009578) #22 AGO2 (ENSBTAG00000001579) #23 CHRAC1 (ENSBTAG00000020226) #24 TRAPPC9 (ENSBTAG00000013955) #27 KCNK9 (ENSBTAG00000047488) #28 FAM135B (ENSBTAG00000018218) #30 KHDRBS3 (ENSBTAG00000002181) #32 ZFAT (ENSBTAG00000017731) #33 ST3GAL1 (ENSBTAG00000001156) #34 NDRG1 (ENSBTAG00000000711) #36 CCN4 (ENSBTAG00000000707) #37 TG (ENSBTAG00000007823) SLA (ENSBTAG00000007828) PHF20L1 (ENSBTAG00000006869) TMEM71 (ENSBTAG00000017138) DNAAF11 (ENSBTAG00000010548) Bos_a ANCESTRAL SPECIES 43 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT01080000258935 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Domestic yak MODERN SPECIES 9 ENSBGRG00000004207 #8 THEM6 (ENSBGRG00000004183) #9 PSCA (ENSBGRG00000004142) #11 JRK (ENSBGRG00000004131) #12 ENSBGRG00000003858 ENSBGRG00000003810 #13 ENSBGRG00000025275 ENSBGRG00000025252 #14 ENSBGRG00000025239 C8orf90 (ENSBGRG00000025227) ENSBGRG00000025197 #16 PTP4A3 (ENSBGRG00000025148) #17 GPR20 (ENSBGRG00000025134) SLC45A4 (ENSBGRG00000025114) #18 DENND3 (ENSBGRG00000025049) #20 PTK2 (ENSBGRG00000024620) #22 AGO2 (ENSBGRG00000024431) #23 ENSBGRG00000024390 #24 ENSBGRG00000024372 TRAPPC9 (ENSBGRG00000024227) #27 KCNK9 (ENSBGRG00000024198) #28 ENSBGRG00000024178 COL22A1 (ENSBGRG00000024054) #29 FAM135B (ENSBGRG00000023910) #30 ENSBGRG00000023891 KHDRBS3 (ENSBGRG00000023782) #32 ZFAT (ENSBGRG00000022983) #33 ST3GAL1 (ENSBGRG00000022921) #34 NDRG1 (ENSBGRG00000022630) #36 CCN4 (ENSBGRG00000022540) #37 SLA (ENSBGRG00000022497) Wild yak MODERN SPECIES 2653 ENSBMUG00000012467 #17 SLC45A4 (ENSBMUG00000012601) #18 DENND3 (ENSBMUG00000012683) #20 PTK2 (ENSBMUG00000012877) #22 AGO2 (ENSBMUG00000013938) #23 ENSBMUG00000014619 #24 TRAPPC9 (ENSBMUG00000015181) #27 American bison MODERN SPECIES 2974 GPR20 (ENSBBBG00000017735) SLC45A4 (ENSBBBG00000017777) #18 DENND3 (ENSBBBG00000017864) #20 PTK2 (ENSBBBG00000018376) #22 AGO2 (ENSBBBG00000018521) #23 ENSBBBG00000018534 TRAPPC9 (ENSBBBG00000004601) #27 KCNK9 (ENSBBBG00000004606) #28 ENSBBBG00000018603 COL22A1 (ENSBBBG00000004714) #29 FAM135B (ENSBBBG00000004741) #30 KHDRBS3 (ENSBBBG00000018860) #32 ZFAT (ENSBBBG00000004834) #33 ST3GAL1 (ENSBBBG00000019019) #34 NDRG1 (ENSBBBG00000019091) #36 CCN4 (ENSBBBG00000019109) #37 SLA (ENSBBBG00000019161) TG (ENSBBBG00000004969) PHF20L1 (ENSBBBG00000019353) Siberian musk deer MODERN SPECIES 141 ENSMMSG00000000931 #17 GPR20 (ENSMMSG00000000914) SLC45A4 (ENSMMSG00000000861) #18 DENND3 (ENSMMSG00000000721) #20 PTK2 (ENSMMSG00000000298) #22 AGO2 (ENSMMSG00000000171) #23 CHRAC1 (ENSMMSG00000000143) #24 ENSMMSG00000000132 ENSMMSG00000000120 TRAPPC9 (ENSMMSG00000000096) #27 KCNK9 (ENSMMSG00000000011) #28 COL22A1 (ENSMMSG00000021268) #29 ENSMMSG00000021170 FAM135B (ENSMMSG00000021096) #30 ENSMMSG00000021071 KHDRBS3 (ENSMMSG00000020977) #32 ZFAT (ENSMMSG00000020835) #33 ST3GAL1 (ENSMMSG00000020803) #34 NDRG1 (ENSMMSG00000020575) #36 CCN4 (ENSMMSG00000020505) #37 Yarkand deer MODERN SPECIES 13 LY6D (ENSCHYG00000013937) ENSCHYG00000013973 LYPD2 (ENSCHYG00000014023) #7 SLURP1 (ENSCHYG00000014068) #8 THEM6 (ENSCHYG00000014103) #9 ENSCHYG00000014131 JRK (ENSCHYG00000014190) #12 ARC (ENSCHYG00000014210) ENSCHYG00000014280 ADGRB1 (ENSCHYG00000014800) #13 ENSCHYG00000015154 #14 ENSCHYG00000016037 #17 SLC45A4 (ENSCHYG00000016290) #18 DENND3 (ENSCHYG00000016570) #20 ENSCHYG00000017231 PTK2 (ENSCHYG00000017386) #22 ENSCHYG00000019424 AGO2 (ENSCHYG00000019522) #23 ENSCHYG00000019694 ENSCHYG00000019730 TRAPPC9 (ENSCHYG00000019843) #27 ENSCHYG00000021286 KCNK9 (ENSCHYG00000021309) #28 ENSCHYG00000021373 FAM135B (ENSCHYG00000021644) #30 KHDRBS3 (ENSCHYG00000021821) #32 ENSCHYG00000021946 ZFAT (ENSCHYG00000021984) #33 ST3GAL1 (ENSCHYG00000022312) #34 NDRG1 (ENSCHYG00000022407) #36 CCN4 (ENSCHYG00000022627) #37 Cetacea ANCESTRAL SPECIES 17 ENSGT00730000111514 ENSGT00730000111571.ab ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000159581 #17 ENSGT01040000240949 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #27 ENSGT00500000045333.c.b.a.a ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00390000017996.b.a ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Blue whale MODERN SPECIES 8 ENSBMSG00010013395 ENSBMSG00010013421 ##10 LY6D (ENSBMSG00010013458) LYNX1 (ENSBMSG00010013471) SLURP1 (ENSBMSG00010013497) #8 THEM6 (ENSBMSG00010013507) #9 PSCA (ENSBMSG00010013514) #11 JRK (ENSBMSG00010013525) #12 ARC (ENSBMSG00010013531) ADGRB1 (ENSBMSG00010013553) #13 TSNARE1 (ENSBMSG00010013598) #14 PTP4A3 (ENSBMSG00010013679) #17 GPR20 (ENSBMSG00010013686) SLC45A4 (ENSBMSG00010013703) #18 DENND3 (ENSBMSG00010013733) #20 PTK2 (ENSBMSG00010014034) #22 AGO2 (ENSBMSG00010014922) #23 CHRAC1 (ENSBMSG00010015044) #24 TRAPPC9 (ENSBMSG00010015081) #27 ENSBMSG00010015118 KCNK9 (ENSBMSG00010015140) #28 COL22A1 (ENSBMSG00010015241) #29 FAM135B (ENSBMSG00010015786) #30 ENSBMSG00010015876 #32 ZFAT (ENSBMSG00010015973) #33 ENSBMSG00010016853 ST3GAL1 (ENSBMSG00010016866) #34 NDRG1 (ENSBMSG00010016901) #36 CCN4 (ENSBMSG00010016943) #37 ENSBMSG00010016990 SLA (ENSBMSG00010017050) Odontoceti ANCESTRAL SPECIES 20 ENSGT00730000111514 ENSGT00730000111571.ab ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000159581 #17 ENSGT01040000240949 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #27 ENSGT00500000045333.c.b.a.a ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00390000017996.b.a ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Sperm whale MODERN SPECIES 6 ZFP41 (ENSPCTG00005014395) LY6H (ENSPCTG00005014505) LY6E (ENSPCTG00005014593) ##11 ENSPCTG00005014680 ENSPCTG00005014909 ##10 ENSPCTG00005014963 #10 TSNARE1 (ENSPCTG00005014986) #14 ADGRB1 (ENSPCTG00005015167) #13 ARC (ENSPCTG00005015916) JRK (ENSPCTG00005015935) #12 PSCA (ENSPCTG00005015964) #11 THEM6 (ENSPCTG00005015996) #9 SLC45A4 (ENSPCTG00005016157) #18 ENSPCTG00005016197 ENSPCTG00005016216 #20 PTK2 (ENSPCTG00005016344) #22 AGO2 (ENSPCTG00005017440) #23 ENSPCTG00005017514 CHRAC1 (ENSPCTG00005017581) #24 TRAPPC9 (ENSPCTG00005017633) #27 ENSPCTG00005017670 #28 COL22A1 (ENSPCTG00005017754) #29 FAM135B (ENSPCTG00005018956) #30 KHDRBS3 (ENSPCTG00005019130) #32 ZFAT (ENSPCTG00005019229) #33 TG (ENSPCTG00005019930) PHF20L1 (ENSPCTG00005020226) TMEM71 (ENSPCTG00005020318) LRRC6 (ENSPCTG00005020472) HHLA1 (ENSPCTG00005020844) ENSPCTG00005020919 Odontoceti_a DUPLICATION Odontoceti_a ANCESTRAL SPECIES 97 ENSGT00970000197161 ENSGT00940000155113.a.a.y #22 Odontoceti_b ANCESTRAL SPECIES 67 ENSGT00970000197161 ENSGT00940000155113.a.a.y #22 Monodontidae ANCESTRAL SPECIES 72 ENSGT00970000197161 ENSGT00940000155113.a.a.y #22 Beluga whale MODERN SPECIES 57 LYNX1 (ENSDLEG00000016418) ENSDLEG00000016398 #8 THEM6 (ENSDLEG00000016390) #9 PSCA (ENSDLEG00000016377) #11 JRK (ENSDLEG00000016371) #12 ARC (ENSDLEG00000016365) ENSDLEG00000016305 #13 ENSDLEG00000016197 #14 PTP4A3 (ENSDLEG00000016173) #17 GPR20 (ENSDLEG00000016169) SLC45A4 (ENSDLEG00000016143) #18 DENND3 (ENSDLEG00000016097) #20 ENSDLEG00000016087 #22 ENSDLEG00000016056 ENSDLEG00000016039 ENSDLEG00000016027 #22 AGO2 (ENSDLEG00000015375) #23 CHRAC1 (ENSDLEG00000015313) #24 ENSDLEG00000015306 TRAPPC9 (ENSDLEG00000014691) #27 KCNK9 (ENSDLEG00000014643) #28 ENSDLEG00000014618 #29 FAM135B (ENSDLEG00000014488) #30 KHDRBS3 (ENSDLEG00000014471) #32 ENSDLEG00000014454 ZFAT (ENSDLEG00000014402) #33 ENSDLEG00000014389 ST3GAL1 (ENSDLEG00000014361) #34 ENSDLEG00000014340 #37 NDRG1 (ENSDLEG00000014229) #36 ENSDLEG00000014206 #37 Odontoceti_a ANCESTRAL SPECIES 17 ENSGT00730000111514 ENSGT00730000111571.ab ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000159581 #17 ENSGT01040000240949 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a.z #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #27 ENSGT00500000045333.c.b.a.a ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00390000017996.b.a ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Dolphin MODERN SPECIES 1763 PTK2 (ENSTTRG00000009800) #22 Odontoceti_b ANCESTRAL SPECIES 19 ENSGT00730000111514 ENSGT00730000111571.ab ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000159581 #17 ENSGT01040000240949 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a.z #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #27 ENSGT00500000045333.c.b.a.a ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00390000017996.b.a ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Vaquita MODERN SPECIES 8 LYNX1 (ENSPSNG00000016038) SLURP1 (ENSPSNG00000015902) #8 THEM6 (ENSPSNG00000015842) #9 PSCA (ENSPSNG00000015788) #11 JRK (ENSPSNG00000015768) #12 ARC (ENSPSNG00000015743) ADGRB1 (ENSPSNG00000015054) #13 TSNARE1 (ENSPSNG00000015005) #14 C8orf90 (ENSPSNG00000014801) PTP4A3 (ENSPSNG00000014669) #17 ENSPSNG00000014557 GPR20 (ENSPSNG00000014525) SLC45A4 (ENSPSNG00000014498) #18 ENSPSNG00000014438 #20 ENSPSNG00000014401 #20 PTK2 (ENSPSNG00000014133) #22 AGO2 (ENSPSNG00000013974) #23 CHRAC1 (ENSPSNG00000013879) #24 ENSPSNG00000013845 TRAPPC9 (ENSPSNG00000013768) #27 KCNK9 (ENSPSNG00000013694) #28 COL22A1 (ENSPSNG00000012298) #29 FAM135B (ENSPSNG00000011969) #30 KHDRBS3 (ENSPSNG00000011841) #32 ZFAT (ENSPSNG00000011653) #33 ENSPSNG00000011623 ENSPSNG00000011603 ST3GAL1 (ENSPSNG00000011560) #34 NDRG1 (ENSPSNG00000018164) #36 CCN4 (ENSPSNG00000018093) #37 SLA (ENSPSNG00000017911) Monodontidae ANCESTRAL SPECIES 20 ENSGT00940000161506 ENSGT00940000159966.B #10 ENSGT00730000111514 ENSGT00730000111571.ab ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a.z #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00500000045333.c.b.a.a ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00500000045333.d ENSGT00940000156658 #33 ENSGT00390000017996.b.a ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 Beluga whale MODERN SPECIES 57 ENSDLEG00000016457 ENSDLEG00000016432 #10 LY6D (ENSDLEG00000016424) LYNX1 (ENSDLEG00000016418) ENSDLEG00000016398 #8 THEM6 (ENSDLEG00000016390) #9 PSCA (ENSDLEG00000016377) #11 JRK (ENSDLEG00000016371) #12 ARC (ENSDLEG00000016365) ENSDLEG00000016305 #13 ENSDLEG00000016197 #14 PTP4A3 (ENSDLEG00000016173) #17 GPR20 (ENSDLEG00000016169) SLC45A4 (ENSDLEG00000016143) #18 DENND3 (ENSDLEG00000016097) #20 ENSDLEG00000016087 #22 ENSDLEG00000016056 ENSDLEG00000016039 ENSDLEG00000016027 #22 AGO2 (ENSDLEG00000015375) #23 CHRAC1 (ENSDLEG00000015313) #24 ENSDLEG00000015306 TRAPPC9 (ENSDLEG00000014691) #27 KCNK9 (ENSDLEG00000014643) #28 ENSDLEG00000014618 #29 FAM135B (ENSDLEG00000014488) #30 KHDRBS3 (ENSDLEG00000014471) #32 ENSDLEG00000014454 ZFAT (ENSDLEG00000014402) #33 ENSDLEG00000014389 ST3GAL1 (ENSDLEG00000014361) #34 Narwhal MODERN SPECIES 300 ADGRB1 (ENSMMNG00015002662) #13 ENSMMNG00015002753 #14 ENSMMNG00015002865 #17 GPR20 (ENSMMNG00015002887) SLC45A4 (ENSMMNG00015002902) #18 DENND3 (ENSMMNG00015002943) #20 PTK2 (ENSMMNG00015003058) #22 AGO2 (ENSMMNG00015003211) #23 CHRAC1 (ENSMMNG00015003266) #24 TRAPPC9 (ENSMMNG00015003298) #27 ENSMMNG00015003369 KCNK9 (ENSMMNG00015003378) #28 ENSMMNG00015003507 FAM135B (ENSMMNG00015003770) #30 ENSMMNG00015003849 #32 ENSMMNG00015003895 ZFAT (ENSMMNG00015003925) #33 ENSMMNG00015003987 ST3GAL1 (ENSMMNG00015004001) #34 NDRG1 (ENSMMNG00015004018) #36 CCN4 (ENSMMNG00015004060) #37 TG (ENSMMNG00015004111) Laurasiatheria_b ANCESTRAL SPECIES 20 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT01040000240949 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Laurasiatheria_c ANCESTRAL SPECIES 19 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Equus ANCESTRAL SPECIES 14 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Horse MODERN SPECIES 30 LY6D (ENSECAG00000006509) LYPD2 (ENSECAG00000031561) #7 THEM6 (ENSECAG00000037572) #9 JRK (ENSECAG00000006063) #12 ARC (ENSECAG00000001167) ENSECAG00000021955 ADGRB1 (ENSECAG00000031963) #13 ENSECAG00000053596 TSNARE1 (ENSECAG00000017952) #14 MROH5 (ENSECAG00000015811) #16 PTP4A3 (ENSECAG00000030951) #17 GPR20 (ENSECAG00000006027) SLC45A4 (ENSECAG00000002520) #18 DENND3 (ENSECAG00000014691) #20 ENSECAG00000044322 PTK2 (ENSECAG00000014150) #22 AGO2 (ENSECAG00000006078) #23 CHRAC1 (ENSECAG00000059937) #24 TRAPPC9 (ENSECAG00000024191) #27 KCNK9 (ENSECAG00000024032) #28 COL22A1 (ENSECAG00000041368) #29 FAM135B (ENSECAG00000011375) #30 KHDRBS3 (ENSECAG00000010194) #32 ZFAT (ENSECAG00000024767) #33 ENSECAG00000005903 ST3GAL1 (ENSECAG00000021364) #34 NDRG1 (ENSECAG00000025129) #36 CCN4 (ENSECAG00000025050) #37 SLA (ENSECAG00000024065) TG (ENSECAG00000018808) PHF20L1 (ENSECAG00000015107) Donkey MODERN SPECIES 3 LYNX1 (ENSEASG00005023610) LYPD2 (ENSEASG00005021073) #7 THEM6 (ENSEASG00005021076) #9 JRK (ENSEASG00005032295) #12 PSCA (ENSEASG00005038256) #11 ARC (ENSEASG00005021082) ENSEASG00005021088 ENSEASG00005021101 #13 ENSEASG00005021106 TSNARE1 (ENSEASG00005021107) #14 MROH5 (ENSEASG00005025679) #16 ENSEASG00005029842 #17 GPR20 (ENSEASG00005021116) SLC45A4 (ENSEASG00005021121) #18 DENND3 (ENSEASG00005021125) #20 PTK2 (ENSEASG00005021317) #22 AGO2 (ENSEASG00005021922) #23 ENSEASG00005021924 #24 TRAPPC9 (ENSEASG00005021944) #27 KCNK9 (ENSEASG00005027390) #28 ENSEASG00005022014 FAM135B (ENSEASG00005022017) #30 KHDRBS3 (ENSEASG00005022023) #32 ZFAT (ENSEASG00005022029) #33 ST3GAL1 (ENSEASG00005022034) #34 NDRG1 (ENSEASG00005022036) #36 CCN4 (ENSEASG00005026762) #37 TG (ENSEASG00005022050) SLA (ENSEASG00005022081) PHF20L1 (ENSEASG00005022090) TMEM71 (ENSEASG00005022099) Chiroptera ANCESTRAL SPECIES 27 ENSGT00940000159966.A ##10 ENSGT00730000111514 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300.i ENSGT00940000156215.f ENSGT00390000011144 Megabat MODERN SPECIES 3800 PTK2 (ENSPVAG00000013240) #22 AGO2 (ENSPVAG00000013238) #23 ENSPVAG00000013237 Microchiroptera ANCESTRAL SPECIES 27 ENSGT00940000159966.A ##10 ENSGT00730000111514 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300.i ENSGT00940000156215.f ENSGT00390000011144 Microbat MODERN SPECIES 1860 PTK2 (ENSMLUG00000010955) #22 Greater horseshoe bat MODERN SPECIES 5 GML (ENSRFEG00010014964) ##10 LY6D (ENSRFEG00010014919) ENSRFEG00010014878 ENSRFEG00010014807 #7 THEM6 (ENSRFEG00010014784) #9 PSCA (ENSRFEG00010014722) #11 ARC (ENSRFEG00010014689) ENSRFEG00010014339 ADGRB1 (ENSRFEG00010014260) #13 ENSRFEG00010014108 #14 MROH5 (ENSRFEG00010013403) #16 PTP4A3 (ENSRFEG00010013219) #17 GPR20 (ENSRFEG00010013194) SLC45A4 (ENSRFEG00010013173) #18 DENND3 (ENSRFEG00010013101) #20 PTK2 (ENSRFEG00010012778) #22 AGO2 (ENSRFEG00010012643) #23 ENSRFEG00010012598 #24 TRAPPC9 (ENSRFEG00010012544) #27 KCNK9 (ENSRFEG00010012493) #28 ENSRFEG00010012449 COL22A1 (ENSRFEG00010010793) #29 FAM135B (ENSRFEG00010010527) #30 KHDRBS3 (ENSRFEG00010010339) #32 ZFAT (ENSRFEG00010019385) #33 ST3GAL1 (ENSRFEG00010019333) #34 NDRG1 (ENSRFEG00010019263) #36 CCN4 (ENSRFEG00010019132) #37 SLA (ENSRFEG00010019049) TG (ENSRFEG00010018495) PHF20L1 (ENSRFEG00010018338) Carnivora ANCESTRAL SPECIES 22 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT01040000240949 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Felidae ANCESTRAL SPECIES 22 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Cat MODERN SPECIES 249 LYPD2 (ENSFCAG00000000126) #7 ENSFCAG00000046944 SLURP1 (ENSFCAG00000032332) #8 THEM6 (ENSFCAG00000041926) #9 PSCA (ENSFCAG00000034685) #11 JRK (ENSFCAG00000038987) #12 ARC (ENSFCAG00000034460) ENSFCAG00000028159 ADGRB1 (ENSFCAG00000005068) #13 TSNARE1 (ENSFCAG00000010752) #14 MROH5 (ENSFCAG00000023728) #16 PTP4A3 (ENSFCAG00000038613) #17 GPR20 (ENSFCAG00000028327) SLC45A4 (ENSFCAG00000010846) #18 DENND3 (ENSFCAG00000015503) #20 PTK2 (ENSFCAG00000014619) #22 AGO2 (ENSFCAG00000002782) #23 ENSFCAG00000040400 TRAPPC9 (ENSFCAG00000023103) #27 KCNK9 (ENSFCAG00000045680) #28 ENSFCAG00000040466 FAM135B (ENSFCAG00000005044) #30 ENSFCAG00000050142 KHDRBS3 (ENSFCAG00000000229) #32 ZFAT (ENSFCAG00000008065) #33 ST3GAL1 (ENSFCAG00000021902) #34 ENSFCAG00000053692 NDRG1 (ENSFCAG00000003212) #36 CCN4 (ENSFCAG00000025709) #37 SLA (ENSFCAG00000041504) TG (ENSFCAG00000011954) Panthera ANCESTRAL SPECIES 16 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000177637 ENSGT00940000156215.f Panthera_a ANCESTRAL SPECIES 16 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000177637 ENSGT00940000156215.f leopard MODERN SPECIES 34 SLURP2 (ENSPPRG00000006355) LYPD2 (ENSPPRG00000006318) #7 THEM6 (ENSPPRG00000006288) #9 PSCA (ENSPPRG00000006245) #11 JRK (ENSPPRG00000019858) #12 ARC (ENSPPRG00000019836) ENSPPRG00000005979 ADGRB1 (ENSPPRG00000005715) #13 TSNARE1 (ENSPPRG00000005532) #14 C8orf90 (ENSPPRG00000004827) ENSPPRG00000004804 #16 PTP4A3 (ENSPPRG00000004614) #17 GPR20 (ENSPPRG00000019718) SLC45A4 (ENSPPRG00000004447) #18 DENND3 (ENSPPRG00000004322) #20 PTK2 (ENSPPRG00000003723) #22 AGO2 (ENSPPRG00000002594) #23 CHRAC1 (ENSPPRG00000002557) #24 TRAPPC9 (ENSPPRG00000002462) #27 KCNK9 (ENSPPRG00000002390) #28 ENSPPRG00000002336 FAM135B (ENSPPRG00000001493) #30 KHDRBS3 (ENSPPRG00000001453) #32 ZFAT (ENSPPRG00000001340) #33 ST3GAL1 (ENSPPRG00000001242) #34 NDRG1 (ENSPPRG00000001214) #36 CCN4 (ENSPPRG00000001054) #37 ENSPPRG00000000896 SLA (ENSPPRG00000000784) PHF20L1 (ENSPPRG00000000672) TMEM71 (ENSPPRG00000000497) lion MODERN SPECIES 509 ENSPLOG00000000620 LYPD2 (ENSPLOG00000000629) #7 SLURP1 (ENSPLOG00000000637) #8 THEM6 (ENSPLOG00000000652) #9 ENSPLOG00000000668 JRK (ENSPLOG00000000682) #12 ARC (ENSPLOG00000000689) ENSPLOG00000000720 ADGRB1 (ENSPLOG00000000796) #13 TSNARE1 (ENSPLOG00000000885) #14 ENSPLOG00000000982 #16 PTP4A3 (ENSPLOG00000001029) #17 GPR20 (ENSPLOG00000001055) SLC45A4 (ENSPLOG00000001065) #18 DENND3 (ENSPLOG00000001097) #20 PTK2 (ENSPLOG00000001166) #22 AGO2 (ENSPLOG00000001314) #23 ENSPLOG00000001430 TRAPPC9 (ENSPLOG00000001450) #27 KCNK9 (ENSPLOG00000001475) #28 ENSPLOG00000001514 FAM135B (ENSPLOG00000001634) #30 KHDRBS3 (ENSPLOG00000001681) #32 ZFAT (ENSPLOG00000001780) #33 ST3GAL1 (ENSPLOG00000001917) #34 NDRG1 (ENSPLOG00000001945) #36 CCN4 (ENSPLOG00000002016) #37 ENSPLOG00000002060 SLA (ENSPLOG00000002109) ENSPLOG00000002148 PHF20L1 (ENSPLOG00000002187) Tiger DUPLICATION Tiger DUPLICATION Tiger MODERN SPECIES 31 LYNX1 (ENSPTIG00000009264) LYPD2 (ENSPTIG00000009254) #7 PSCA (ENSPTIG00000009204) #11 ENSPTIG00000008773 ENSPTIG00000008655 #16 PTP4A3 (ENSPTIG00000008574) #17 SLC45A4 (ENSPTIG00000008447) #18 DENND3 (ENSPTIG00000008002) #20 ENSPTIG00000007956 #22 ENSPTIG00000007841 #22 ENSPTIG00000007828 #22 ENSPTIG00000007717 #22 AGO2 (ENSPTIG00000007438) #23 CHRAC1 (ENSPTIG00000007374) #24 TRAPPC9 (ENSPTIG00000007222) #27 KCNK9 (ENSPTIG00000006923) #28 COL22A1 (ENSPTIG00000005876) #29 FAM135B (ENSPTIG00000005576) #30 KHDRBS3 (ENSPTIG00000005373) #32 ZFAT (ENSPTIG00000003779) #33 ST3GAL1 (ENSPTIG00000002565) #34 NDRG1 (ENSPTIG00000019803) #36 CCN4 (ENSPTIG00000019683) #37 SLA (ENSPTIG00000019360) ENSPTIG00000019133 Tiger MODERN SPECIES 31 LYNX1 (ENSPTIG00000009264) LYPD2 (ENSPTIG00000009254) #7 PSCA (ENSPTIG00000009204) #11 ENSPTIG00000008773 ENSPTIG00000008655 #16 PTP4A3 (ENSPTIG00000008574) #17 SLC45A4 (ENSPTIG00000008447) #18 DENND3 (ENSPTIG00000008002) #20 ENSPTIG00000007956 #22 ENSPTIG00000007841 #22 ENSPTIG00000007828 #22 ENSPTIG00000007717 #22 AGO2 (ENSPTIG00000007438) #23 CHRAC1 (ENSPTIG00000007374) #24 TRAPPC9 (ENSPTIG00000007222) #27 KCNK9 (ENSPTIG00000006923) #28 COL22A1 (ENSPTIG00000005876) #29 FAM135B (ENSPTIG00000005576) #30 KHDRBS3 (ENSPTIG00000005373) #32 ZFAT (ENSPTIG00000003779) #33 ST3GAL1 (ENSPTIG00000002565) #34 NDRG1 (ENSPTIG00000019803) #36 CCN4 (ENSPTIG00000019683) #37 SLA (ENSPTIG00000019360) Tiger DUPLICATION Tiger MODERN SPECIES 31 LYNX1 (ENSPTIG00000009264) LYPD2 (ENSPTIG00000009254) #7 PSCA (ENSPTIG00000009204) #11 ENSPTIG00000008773 ENSPTIG00000008655 #16 PTP4A3 (ENSPTIG00000008574) #17 SLC45A4 (ENSPTIG00000008447) #18 DENND3 (ENSPTIG00000008002) #20 ENSPTIG00000007956 #22 ENSPTIG00000007841 #22 ENSPTIG00000007828 #22 ENSPTIG00000007717 #22 AGO2 (ENSPTIG00000007438) #23 CHRAC1 (ENSPTIG00000007374) #24 TRAPPC9 (ENSPTIG00000007222) #27 KCNK9 (ENSPTIG00000006923) #28 COL22A1 (ENSPTIG00000005876) #29 FAM135B (ENSPTIG00000005576) #30 KHDRBS3 (ENSPTIG00000005373) #32 ZFAT (ENSPTIG00000003779) #33 ST3GAL1 (ENSPTIG00000002565) #34 NDRG1 (ENSPTIG00000019803) #36 CCN4 (ENSPTIG00000019683) #37 SLA (ENSPTIG00000019360) ENSPTIG00000019133 PHF20L1 (ENSPTIG00000018849) TMEM71 (ENSPTIG00000018244) Tiger MODERN SPECIES 31 LYNX1 (ENSPTIG00000009264) LYPD2 (ENSPTIG00000009254) #7 PSCA (ENSPTIG00000009204) #11 ENSPTIG00000008773 ENSPTIG00000008655 #16 PTP4A3 (ENSPTIG00000008574) #17 SLC45A4 (ENSPTIG00000008447) #18 DENND3 (ENSPTIG00000008002) #20 ENSPTIG00000007956 #22 ENSPTIG00000007841 #22 ENSPTIG00000007828 #22 ENSPTIG00000007717 #22 AGO2 (ENSPTIG00000007438) #23 CHRAC1 (ENSPTIG00000007374) #24 TRAPPC9 (ENSPTIG00000007222) #27 KCNK9 (ENSPTIG00000006923) #28 COL22A1 (ENSPTIG00000005876) #29 FAM135B (ENSPTIG00000005576) #30 KHDRBS3 (ENSPTIG00000005373) #32 ZFAT (ENSPTIG00000003779) #33 ST3GAL1 (ENSPTIG00000002565) #34 NDRG1 (ENSPTIG00000019803) #36 CCN4 (ENSPTIG00000019683) #37 SLA (ENSPTIG00000019360) ENSPTIG00000019133 PHF20L1 (ENSPTIG00000018849) Caniformia ANCESTRAL SPECIES 23 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT01040000240949 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Canidae ANCESTRAL SPECIES 33 ENSGT00940000164325 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Canis_lupus ANCESTRAL SPECIES 19 ENSGT00940000164325 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT01050000248409 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Dog MODERN SPECIES 4 ENSCAFG00845014227 LYPD2 (ENSCAFG00845014195) #7 SLURP1 (ENSCAFG00845014172) #8 THEM6 (ENSCAFG00845014150) #9 PSCA (ENSCAFG00845014135) #11 JRK (ENSCAFG00845014123) #12 ARC (ENSCAFG00845014113) ENSCAFG00845014062 ADGRB1 (ENSCAFG00845013988) #13 ENSCAFG00845013724 #14 MROH5 (ENSCAFG00845013367) #16 PTP4A3 (ENSCAFG00845013289) #17 GPR20 (ENSCAFG00845013261) SLC45A4 (ENSCAFG00845013083) #18 DENND3 (ENSCAFG00845012933) #20 PTK2 (ENSCAFG00845012455) #22 AGO2 (ENSCAFG00845012184) #23 CHRAC1 (ENSCAFG00845012136) #24 TRAPPC9 (ENSCAFG00845011965) #27 KCNK9 (ENSCAFG00845011923) #28 COL22A1 (ENSCAFG00845011558) #29 FAM135B (ENSCAFG00845011345) #30 ENSCAFG00845011290 KHDRBS3 (ENSCAFG00845011046) #32 ZFAT (ENSCAFG00845010442) #33 ST3GAL1 (ENSCAFG00845010238) #34 NDRG1 (ENSCAFG00845009769) #36 CCN4 (ENSCAFG00845009509) #37 SLA (ENSCAFG00845009256) TG (ENSCAFG00845008772) PHF20L1 (ENSCAFG00845008447) Dingo MODERN SPECIES 88 SLURP1 (ENSCAFG00020018582) #8 THEM6 (ENSCAFG00020018579) #9 PSCA (ENSCAFG00020018574) #11 JRK (ENSCAFG00020018570) #12 ENSCAFG00020018567 ARC (ENSCAFG00020018566) ENSCAFG00020018522 ADGRB1 (ENSCAFG00020018429) #13 TSNARE1 (ENSCAFG00020018404) #14 ENSCAFG00020018384 #16 PTP4A3 (ENSCAFG00020018367) #17 GPR20 (ENSCAFG00020018362) SLC45A4 (ENSCAFG00020018358) #18 DENND3 (ENSCAFG00020018348) #20 ENSCAFG00020018346 PTK2 (ENSCAFG00020015459) #22 AGO2 (ENSCAFG00020014198) #23 CHRAC1 (ENSCAFG00020014129) #24 TRAPPC9 (ENSCAFG00020013664) #27 KCNK9 (ENSCAFG00020013626) #28 ENSCAFG00020013620 FAM135B (ENSCAFG00020013611) #30 ENSCAFG00020013598 KHDRBS3 (ENSCAFG00020013570) #32 ZFAT (ENSCAFG00020013483) #33 ENSCAFG00020013460 ST3GAL1 (ENSCAFG00020013456) #34 NDRG1 (ENSCAFG00020013455) #36 CCN4 (ENSCAFG00020013453) #37 SLA (ENSCAFG00020013450) ENSCAFG00020013443 Red fox MODERN SPECIES 202 SLURP1 (ENSVVUG00000013919) #8 THEM6 (ENSVVUG00000013927) #9 PSCA (ENSVVUG00000013929) #11 JRK (ENSVVUG00000013933) #12 ARC (ENSVVUG00000013938) ENSVVUG00000013942 ADGRB1 (ENSVVUG00000013982) #13 TSNARE1 (ENSVVUG00000014254) #14 ENSVVUG00000014278 #16 ENSVVUG00000014293 #16 ENSVVUG00000014299 #17 ENSVVUG00000014301 #17 GPR20 (ENSVVUG00000014304) SLC45A4 (ENSVVUG00000014310) #18 DENND3 (ENSVVUG00000014330) #20 PTK2 (ENSVVUG00000014682) #22 AGO2 (ENSVVUG00000014692) #23 CHRAC1 (ENSVVUG00000014699) #24 TRAPPC9 (ENSVVUG00000014706) #27 ENSVVUG00000014735 KCNK9 (ENSVVUG00000014739) #28 Caniformia_b ANCESTRAL SPECIES 22 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743.d ENSGT01040000240949 ENSGT00940000163743.c ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Mustelinae ANCESTRAL SPECIES 68 ENSGT00940000162197.a #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743.d ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 American mink MODERN SPECIES 167 LYPD2 (ENSNVIG00000014802) #7 SLURP1 (ENSNVIG00000014827) #8 THEM6 (ENSNVIG00000014835) #9 PSCA (ENSNVIG00000014841) #11 JRK (ENSNVIG00000014858) #12 ARC (ENSNVIG00000014874) ENSNVIG00000014885 ADGRB1 (ENSNVIG00000015002) #13 TSNARE1 (ENSNVIG00000015082) #14 ENSNVIG00000015129 #16 PTP4A3 (ENSNVIG00000015173) #17 GPR20 (ENSNVIG00000015219) SLC45A4 (ENSNVIG00000015223) #18 ENSNVIG00000015230 #20 ENSNVIG00000015280 #20 PTK2 (ENSNVIG00000015342) #22 AGO2 (ENSNVIG00000015716) #23 ENSNVIG00000015772 #24 TRAPPC9 (ENSNVIG00000015793) #27 KCNK9 (ENSNVIG00000015902) #28 COL22A1 (ENSNVIG00000015932) #29 FAM135B (ENSNVIG00000016203) #30 ENSNVIG00000016233 KHDRBS3 (ENSNVIG00000016244) #32 ZFAT (ENSNVIG00000016275) #33 ENSNVIG00000016549 Ferret MODERN SPECIES 172 ENSMPUG00000002087 ENSMPUG00000002086 ENSMPUG00000002084 ADGRB1 (ENSMPUG00000002001) #13 ENSMPUG00000001998 ENSMPUG00000019188 TSNARE1 (ENSMPUG00000001976) #14 ENSMPUG00000001975 C8orf90 (ENSMPUG00000001972) MROH5 (ENSMPUG00000001962) #16 PTP4A3 (ENSMPUG00000001950) #17 GPR20 (ENSMPUG00000019185) ENSMPUG00000001947 SLC45A4 (ENSMPUG00000001946) #18 DENND3 (ENSMPUG00000001942) #20 PTK2 (ENSMPUG00000001936) #22 AGO2 (ENSMPUG00000001930) #23 ENSMPUG00000001929 ENSMPUG00000001926 #27 ENSMPUG00000001922 ENSMPUG00000001917 #27 ENSMPUG00000001914 KCNK9 (ENSMPUG00000001908) #28 COL22A1 (ENSMPUG00000001891) #29 ENSMPUG00000001888 FAM135B (ENSMPUG00000001882) #30 KHDRBS3 (ENSMPUG00000001869) #32 ENSMPUG00000001868 ENSMPUG00000001866 ZFAT (ENSMPUG00000001862) #33 ENSMPUG00000019176 Ursidae ANCESTRAL SPECIES 26 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743.d ENSGT01040000240949 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C.s #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 16 ENSAMEG00000010004 MMRN2 (ENSAMEG00000009997) BMPR1A (ENSAMEG00000009972) LDB3 (ENSAMEG00000009941) OPN4 (ENSAMEG00000009912) ENSAMEG00000027199 ENSAMEG00000024384 WAPL (ENSAMEG00000009905) GRID1 (ENSAMEG00000009876) CCSER2 (ENSAMEG00000009866) RGR (ENSAMEG00000009851) LRIT1 (ENSAMEG00000009838) LRIT2 (ENSAMEG00000009834) CDHR1 (ENSAMEG00000009794) GPR15LG (ENSAMEG00000029953) ENSAMEG00000029479 #22 GHITM (ENSAMEG00000009753) NRG3 (ENSAMEG00000002812) ENSAMEG00000030329 ENSAMEG00000027737 SH2D4B (ENSAMEG00000012951) TSPAN14 (ENSAMEG00000013070) PRXL2A (ENSAMEG00000013059) DYDC2 (ENSAMEG00000013056) ENSAMEG00000013050 ENSAMEG00000013025 ENSAMEG00000026411 ENSAMEG00000013016 ENSAMEG00000013003 TMEM254 (ENSAMEG00000012986) PLAC9 (ENSAMEG00000012985) Giant Panda MODERN SPECIES 19 SLURP1 (ENSAMEG00000001401) #8 THEM6 (ENSAMEG00000031034) #9 PSCA (ENSAMEG00000001413) #11 JRK (ENSAMEG00000025092) #12 ARC (ENSAMEG00000001462) ENSAMEG00000001467 ENSAMEG00000027545 ENSAMEG00000001416 #13 ENSAMEG00000001499 #14 ENSAMEG00000001529 #16 ENSAMEG00000028309 #16 PTP4A3 (ENSAMEG00000023758) #17 GPR20 (ENSAMEG00000025864) SLC45A4 (ENSAMEG00000001563) #18 DENND3 (ENSAMEG00000001580) #20 PTK2 (ENSAMEG00000005104) #22 AGO2 (ENSAMEG00000005019) #23 CHRAC1 (ENSAMEG00000005017) #24 TRAPPC9 (ENSAMEG00000024149) #27 KCNK9 (ENSAMEG00000005009) #28 ENSAMEG00000006435 FAM135B (ENSAMEG00000003012) #30 ENSAMEG00000025766 #32 ENSAMEG00000016750 #33 ENSAMEG00000012856 TG (ENSAMEG00000012818) PHF20L1 (ENSAMEG00000012878) TMEM71 (ENSAMEG00000012906) DNAAF11 (ENSAMEG00000012908) KCNQ3 (ENSAMEG00000012923) OC90 (ENSAMEG00000012980) Ursus ANCESTRAL SPECIES 217 ENSGT00730000111514 ENSGT00730000111571 ENSGT00940000153378.a.a ##11 ENSGT00940000162197 #7 ENSGT00940000162933 #8 ENSGT00940000153378.a.b #11 ENSGT00940000162277 #12 ENSGT00450000040324.a ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C.s #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00390000006486 #27 Polar bear MODERN SPECIES 216 LY6D (ENSUMAG00000020419) LYNX1 (ENSUMAG00000020417) ENSUMAG00000020407 ##11 LYPD2 (ENSUMAG00000020402) #7 SLURP1 (ENSUMAG00000020398) #8 PSCA (ENSUMAG00000020395) #11 JRK (ENSUMAG00000020393) #12 ENSUMAG00000020389 ENSUMAG00000020369 ENSUMAG00000020353 #16 PTP4A3 (ENSUMAG00000020350) #17 ENSUMAG00000020343 #18 DENND3 (ENSUMAG00000020261) #20 ENSUMAG00000020237 PTK2 (ENSUMAG00000020192) #22 AGO2 (ENSUMAG00000019572) #23 TRAPPC9 (ENSUMAG00000019186) #27 ENSUMAG00000019160 American black bear DUPLICATION American black bear DUPLICATION American black bear MODERN SPECIES 5487 ENSUAMG00000011999 #22 American black bear MODERN SPECIES 9207 ENSUAMG00000001195 #22 American black bear MODERN SPECIES 5033 PTK2 (ENSUAMG00000022672) #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155113.a.a #22 Common shrew MODERN SPECIES 5020 ENSSARG00000008468 #22 Hedgehog MODERN SPECIES 6452 PTK2 (ENSEEUG00000013097) #22 Atlantogenata ANCESTRAL SPECIES 106 ENSGT00570000080880 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308.n.b #29 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215 ENSGT00390000011144 Xenarthra ANCESTRAL SPECIES 1288 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 Armadillo MODERN SPECIES 1038 GPR20 (ENSDNOG00000025432) SLC45A4 (ENSDNOG00000014979) #18 ENSDNOG00000039123 DENND3 (ENSDNOG00000000994) #20 PTK2 (ENSDNOG00000017110) #22 Sloth MODERN SPECIES 5744 PTK2 (ENSCHOG00000010980) #22 Afrotheria ANCESTRAL SPECIES 10 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215 ENSGT00390000011144 ENSGT00940000158506 Tenrec MODERN SPECIES 6270 ENSETEG00000018006 #22 Afrotheria_a ANCESTRAL SPECIES 10 ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000164160 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215 ENSGT00390000011144 Hyrax MODERN SPECIES 5283 PTK2 (ENSPCAG00000017055) #22 Elephant MODERN SPECIES 567 ENSLAFG00000026802 #16 PTP4A3 (ENSLAFG00000006213) #17 GPR20 (ENSLAFG00000025908) SLC45A4 (ENSLAFG00000010099) #18 DENND3 (ENSLAFG00000015654) #20 PTK2 (ENSLAFG00000007270) #22 AGO2 (ENSLAFG00000012905) #23 CHRAC1 (ENSLAFG00000001188) #24 TRAPPC9 (ENSLAFG00000001660) #27 KCNK9 (ENSLAFG00000008503) #28 ENSLAFG00000009277 FAM135B (ENSLAFG00000004228) #30 KHDRBS3 (ENSLAFG00000004849) #32 ZFAT (ENSLAFG00000010205) #33 ST3GAL1 (ENSLAFG00000029095) #34 NDRG1 (ENSLAFG00000002836) #36 CCN4 (ENSLAFG00000002835) #37 SLA (ENSLAFG00000013718) TG (ENSLAFG00000012474) PHF20L1 (ENSLAFG00000006105) TMEM71 (ENSLAFG00000009515) Marsupialia ANCESTRAL SPECIES 1 ENSGT00940000162197 #7 ENSGT01030000235263.a ENSGT00940000162933 #8 ENSGT00390000004859 #9 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00450000040324.a ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000156079 #30 ENSGT00940000154143.f.d ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215 ENSGT00390000011144 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT01030000235263.a ENSGT00390000004859 #9 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00450000040324.a ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000156079 #30 ENSGT00940000154143.f.d ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215 ENSGT00390000011144 Diprotodontia ANCESTRAL SPECIES 51 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT01030000235263.a ENSGT00390000004859 #9 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00450000040324.a ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000156079 #30 ENSGT00940000154143.f.d Diprotodontia_a ANCESTRAL SPECIES 48 ENSGT00730000111571 ENSGT00940000162197 #7 ENSGT01030000235263.a ENSGT00390000004859 #9 ENSGT00940000162277 #12 ENSGT00390000003914 ENSGT00940000163743 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00450000040324.a ENSGT00940000160938 #16 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000156079 #30 ENSGT00940000154143.f.d Common wonbat DUPLICATION Common wonbat DUPLICATION Common wonbat MODERN SPECIES 307 ENSVURG00010018512 LYNX1 (ENSVURG00010018518) LYPD2 (ENSVURG00010018521) #7 THEM6 (ENSVURG00010018524) #9 ENSVURG00010018528 ARC (ENSVURG00010018531) ADGRB1 (ENSVURG00010018560) #13 ENSVURG00010018798 ENSVURG00010018807 #16 PTP4A3 (ENSVURG00010018814) #17 GPR20 (ENSVURG00010018852) SLC45A4 (ENSVURG00010018857) #18 DENND3 (ENSVURG00010018871) #20 ENSVURG00010018898 #22 ENSVURG00010018902 #22 ENSVURG00010018910 #22 AGO2 (ENSVURG00010018916) #23 CHRAC1 (ENSVURG00010018927) #24 TRAPPC9 (ENSVURG00010018932) #27 ENSVURG00010018939 ENSVURG00010018941 KCNK9 (ENSVURG00010018946) #28 ENSVURG00010018961 #30 ENSVURG00010018966 #30 ENSVURG00010018974 ENSVURG00010018978 Common wonbat MODERN SPECIES 307 ENSVURG00010018368 ENSVURG00010018503 ENSVURG00010018512 LYNX1 (ENSVURG00010018518) LYPD2 (ENSVURG00010018521) #7 THEM6 (ENSVURG00010018524) #9 ENSVURG00010018528 ARC (ENSVURG00010018531) ADGRB1 (ENSVURG00010018560) #13 ENSVURG00010018798 ENSVURG00010018807 #16 PTP4A3 (ENSVURG00010018814) #17 GPR20 (ENSVURG00010018852) SLC45A4 (ENSVURG00010018857) #18 DENND3 (ENSVURG00010018871) #20 ENSVURG00010018898 #22 ENSVURG00010018902 #22 ENSVURG00010018910 #22 AGO2 (ENSVURG00010018916) #23 CHRAC1 (ENSVURG00010018927) #24 TRAPPC9 (ENSVURG00010018932) #27 ENSVURG00010018939 ENSVURG00010018941 KCNK9 (ENSVURG00010018946) #28 ENSVURG00010018961 #30 ENSVURG00010018966 #30 ENSVURG00010018974 ENSVURG00010018978 Common wonbat MODERN SPECIES 307 ENSVURG00010018503 ENSVURG00010018512 LYNX1 (ENSVURG00010018518) LYPD2 (ENSVURG00010018521) #7 THEM6 (ENSVURG00010018524) #9 ENSVURG00010018528 ARC (ENSVURG00010018531) ADGRB1 (ENSVURG00010018560) #13 ENSVURG00010018798 ENSVURG00010018807 #16 PTP4A3 (ENSVURG00010018814) #17 GPR20 (ENSVURG00010018852) SLC45A4 (ENSVURG00010018857) #18 DENND3 (ENSVURG00010018871) #20 ENSVURG00010018898 #22 ENSVURG00010018902 #22 ENSVURG00010018910 #22 AGO2 (ENSVURG00010018916) #23 CHRAC1 (ENSVURG00010018927) #24 TRAPPC9 (ENSVURG00010018932) #27 ENSVURG00010018939 ENSVURG00010018941 KCNK9 (ENSVURG00010018946) #28 ENSVURG00010018961 #30 ENSVURG00010018966 #30 ENSVURG00010018974 ENSVURG00010018978 koala MODERN SPECIES 170 SLC45A4 (ENSPCIG00000000685) #18 DENND3 (ENSPCIG00000027056) #20 PTK2 (ENSPCIG00000026517) #22 AGO2 (ENSPCIG00000026513) #23 CHRAC1 (ENSPCIG00000026511) #24 TRAPPC9 (ENSPCIG00000026318) #27 KCNK9 (ENSPCIG00000006474) #28 FAM135B (ENSPCIG00000011634) #30 Wallaby MODERN SPECIES 7785 ENSMEUG00000003208 #22 Tasmanian devil MODERN SPECIES ENSSHAG00000017767 ENSSHAG00000031009 #9 JRK (ENSSHAG00000027142) #12 ENSSHAG00000031776 ARC (ENSSHAG00000025802) ENSSHAG00000017159 ADGRB1 (ENSSHAG00000016588) #13 ENSSHAG00000025089 ENSSHAG00000010892 ENSSHAG00000002205 ENSSHAG00000016640 #16 PTP4A3 (ENSSHAG00000022131) #17 GPR20 (ENSSHAG00000020490) SLC45A4 (ENSSHAG00000014716) #18 DENND3 (ENSSHAG00000014190) #20 PTK2 (ENSSHAG00000011092) #22 AGO2 (ENSSHAG00000009593) #23 ENSSHAG00000025232 ENSSHAG00000005176 #27 ENSSHAG00000025364 #28 ENSSHAG00000024591 ENSSHAG00000002738 ENSSHAG00000018716 #30 ENSSHAG00000029089 ENSSHAG00000000383 ENSSHAG00000032083 #32 ZFAT (ENSSHAG00000018373) #33 ST3GAL1 (ENSSHAG00000029982) #34 NDRG1 (ENSSHAG00000024700) #36 CCN4 (ENSSHAG00000015115) #37 SLA (ENSSHAG00000021012) Opossum DUPLICATION Opossum MODERN SPECIES 2 ENSMODG00000039273 ENSMODG00000024365 #8 THEM6 (ENSMODG00000000042) #9 JRK (ENSMODG00000024367) #12 ARC (ENSMODG00000000033) ENSMODG00000000048 ADGRB1 (ENSMODG00000000556) #13 ENSMODG00000029552 #14 ENSMODG00000049316 ENSMODG00000000627 #16 PTP4A3 (ENSMODG00000000651) #17 GPR20 (ENSMODG00000024396) ENSMODG00000024398 SLC45A4 (ENSMODG00000000663) #18 ENSMODG00000042019 #20 ENSMODG00000049323 #22 ENSMODG00000038709 ENSMODG00000000707 #22 AGO2 (ENSMODG00000000748) #23 CHRAC1 (ENSMODG00000044477) #24 TRAPPC9 (ENSMODG00000024422) #27 ENSMODG00000024423 KCNK9 (ENSMODG00000000764) #28 ENSMODG00000000768 FAM135B (ENSMODG00000000885) #30 ENSMODG00000000893 ENSMODG00000048341 ENSMODG00000040118 ENSMODG00000041754 KHDRBS3 (ENSMODG00000000975) #32 ENSMODG00000001054 Opossum MODERN SPECIES 2 THEM6 (ENSMODG00000000042) #9 JRK (ENSMODG00000024367) #12 ARC (ENSMODG00000000033) ENSMODG00000000048 ADGRB1 (ENSMODG00000000556) #13 ENSMODG00000029552 #14 ENSMODG00000049316 ENSMODG00000000627 #16 PTP4A3 (ENSMODG00000000651) #17 GPR20 (ENSMODG00000024396) ENSMODG00000024398 SLC45A4 (ENSMODG00000000663) #18 ENSMODG00000042019 #20 ENSMODG00000049323 #22 ENSMODG00000038709 ENSMODG00000000707 #22 AGO2 (ENSMODG00000000748) #23 CHRAC1 (ENSMODG00000044477) #24 TRAPPC9 (ENSMODG00000024422) #27 ENSMODG00000024423 KCNK9 (ENSMODG00000000764) #28 ENSMODG00000000768 FAM135B (ENSMODG00000000885) #30 ENSMODG00000000893 ENSMODG00000048341 ENSMODG00000040118 ENSMODG00000041754 KHDRBS3 (ENSMODG00000000975) #32 ENSMODG00000001054 ZFAT (ENSMODG00000001068) #33 ENSMODG00000047814 Platypus MODERN SPECIES 15 ENSOANG00000006709 #16 PTP4A3 (ENSOANG00000029465) #17 GPR20 (ENSOANG00000009762) SLC45A4 (ENSOANG00000009761) #18 DENND3 (ENSOANG00000007128) #20 PTK2 (ENSOANG00000007126) #22 AGO2 (ENSOANG00000007125) #23 ENSOANG00000041698 #24 TRAPPC9 (ENSOANG00000007122) #27 KCNK9 (ENSOANG00000007121) #28 FAM135B (ENSOANG00000014070) #30 KHDRBS3 (ENSOANG00000014074) #32 LYPD2 (ENSOANG00000014075) #7 ENSOANG00000014076 #7 ENSOANG00000042432 #11 RPLP1 (ENSOANG00000037964) ENSOANG00000037081 ARC (ENSOANG00000014077) ENSOANG00000014078 ADGRB1 (ENSOANG00000014079) #13 ENSOANG00000020239 #14 Sauria ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT00390000004859.i #9 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT00940000166193 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Lepidosauria ANCESTRAL SPECIES 2 ENSGT00940000153378.b.a.a.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT00390000004859.i #9 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT00940000166193 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000177637 ENSGT00940000156215 ENSGT00390000011144 tuatara DUPLICATION tuatara DUPLICATION tuatara MODERN SPECIES 1282 ENSSPUG00000006125 LYPD2 (ENSSPUG00000006133) #7 ARC (ENSSPUG00000006157) ADGRB1 (ENSSPUG00000006166) #13 ENSSPUG00000006206 TSNARE1 (ENSSPUG00000006223) #14 PTP4A3 (ENSSPUG00000006297) #17 ENSSPUG00000006342 GPR20 (ENSSPUG00000006445) ENSSPUG00000006481 #20 ENSSPUG00000006488 #20 ENSSPUG00000006498 #20 ENSSPUG00000006505 #20 ENSSPUG00000006515 #22 ENSSPUG00000006531 #22 ENSSPUG00000006566 #22 RPLP1 (ENSSPUG00000006575) AGO2 (ENSSPUG00000006608) #23 CHRAC1 (ENSSPUG00000006637) #24 TRAPPC9 (ENSSPUG00000006667) #27 KCNK9 (ENSSPUG00000006785) #28 tuatara MODERN SPECIES 1282 LY6E (ENSSPUG00000006104) ##11 ENSSPUG00000006118 ENSSPUG00000006125 LYPD2 (ENSSPUG00000006133) #7 ARC (ENSSPUG00000006157) ADGRB1 (ENSSPUG00000006166) #13 ENSSPUG00000006206 TSNARE1 (ENSSPUG00000006223) #14 PTP4A3 (ENSSPUG00000006297) #17 ENSSPUG00000006342 GPR20 (ENSSPUG00000006445) ENSSPUG00000006481 #20 ENSSPUG00000006488 #20 ENSSPUG00000006498 #20 ENSSPUG00000006505 #20 ENSSPUG00000006515 #22 ENSSPUG00000006531 #22 ENSSPUG00000006566 #22 RPLP1 (ENSSPUG00000006575) AGO2 (ENSSPUG00000006608) #23 CHRAC1 (ENSSPUG00000006637) #24 TRAPPC9 (ENSSPUG00000006667) #27 KCNK9 (ENSSPUG00000006785) #28 tuatara MODERN SPECIES 1282 ENSSPUG00000006118 ENSSPUG00000006125 LYPD2 (ENSSPUG00000006133) #7 ARC (ENSSPUG00000006157) ADGRB1 (ENSSPUG00000006166) #13 ENSSPUG00000006206 TSNARE1 (ENSSPUG00000006223) #14 PTP4A3 (ENSSPUG00000006297) #17 ENSSPUG00000006342 GPR20 (ENSSPUG00000006445) ENSSPUG00000006481 #20 ENSSPUG00000006488 #20 ENSSPUG00000006498 #20 ENSSPUG00000006505 #20 ENSSPUG00000006515 #22 ENSSPUG00000006531 #22 ENSSPUG00000006566 #22 RPLP1 (ENSSPUG00000006575) AGO2 (ENSSPUG00000006608) #23 CHRAC1 (ENSSPUG00000006637) #24 TRAPPC9 (ENSSPUG00000006667) #27 KCNK9 (ENSSPUG00000006785) #28 Episquamata ANCESTRAL SPECIES 1 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT00390000004859.i #9 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00910000144338 ENSGT00960000190025 ENSGT00940000156079.q #30 ENSGT00940000156079.r #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 Laterata ANCESTRAL SPECIES 5 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT01030000235263 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00910000144338 ENSGT00960000190025 ENSGT00940000156079.q #30 ENSGT00940000156079.r #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 Common wall lizard MODERN SPECIES 15 THEM6 (ENSPMRG00000005690) #9 ENSPMRG00000005697 ENSPMRG00000005706 ##11 PSCA (ENSPMRG00000005711) #11 ARC (ENSPMRG00000005718) ENSPMRG00000005723 ADGRB1 (ENSPMRG00000005731) #13 ENSPMRG00000005753 TSNARE1 (ENSPMRG00000005772) #14 ENSPMRG00000005802 ENSPMRG00000005806 PTP4A3 (ENSPMRG00000005814) #17 GPR20 (ENSPMRG00000005822) SLC45A4 (ENSPMRG00000005828) #18 DENND3 (ENSPMRG00000005841) #20 PTK2 (ENSPMRG00000005866) #22 RPLP1 (ENSPMRG00000005922) AGO2 (ENSPMRG00000006138) #23 CHRAC1 (ENSPMRG00000006780) #24 TRAPPC9 (ENSPMRG00000006837) #27 ENSPMRG00000007004 #28 KCNK9 (ENSPMRG00000007010) #28 ENSPMRG00000007018 ENSPMRG00000007028 ENSPMRG00000007037 ENSPMRG00000007043 ENSPMRG00000007047 ENSPMRG00000007051 ENSPMRG00000007057 ENSPMRG00000007063 ENSPMRG00000007068 Argentine black and white tegu MODERN SPECIES 13 ENSSMRG00000008144 ##11 ENSSMRG00000008140 ##11 ENSSMRG00000008134 LYPD2 (ENSSMRG00000008128) #7 ENSSMRG00000008125 ENSSMRG00000008123 ENSSMRG00000008106 ARC (ENSSMRG00000008099) ADGRB1 (ENSSMRG00000008078) #13 ENSSMRG00000008023 TSNARE1 (ENSSMRG00000007976) #14 ENSSMRG00000007961 #17 GPR20 (ENSSMRG00000007950) SLC45A4 (ENSSMRG00000007941) #18 DENND3 (ENSSMRG00000007932) #20 PTK2 (ENSSMRG00000007865) #22 RPLP1 (ENSSMRG00000007764) AGO2 (ENSSMRG00000007763) #23 CHRAC1 (ENSSMRG00000007762) #24 TRAPPC9 (ENSSMRG00000006918) #27 KCNK9 (ENSSMRG00000006889) #28 CATSPER2 (ENSSMRG00000006879) ENSSMRG00000006873 ENSSMRG00000006867 ENSSMRG00000006864 ENSSMRG00000006857 ENSSMRG00000006850 ENSSMRG00000006844 ENSSMRG00000006843 ENSSMRG00000006833 ENSSMRG00000006828 Toxicofera ANCESTRAL SPECIES 8 ENSGT01010000227788 ENSGT00990000205443 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT00390000004859.i #9 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00910000144338 ENSGT00940000163557.C ENSGT00940000156079.q #30 ENSGT00940000156079.r #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 Lizard MODERN SPECIES 3 RRM2B (ENSACAG00000008913) NCALD (ENSACAG00000042404) ENSACAG00000038144 ENSACAG00000043335 ENSACAG00000008759 ENSACAG00000036322 ENSACAG00000036602 ZNF706 (ENSACAG00000008753) YWHAZ (ENSACAG00000040316) ENSACAG00000039635 ENSACAG00000028249 ENSACAG00000000749 #17 GPR20 (ENSACAG00000000748) SLC45A4 (ENSACAG00000000653) #18 DENND3 (ENSACAG00000000549) #20 PTK2 (ENSACAG00000000203) #22 ENSACAG00000000197 AGO2 (ENSACAG00000000167) #23 CHRAC1 (ENSACAG00000000166) #24 TRAPPC9 (ENSACAG00000000144) #27 ENSACAG00000041405 KCNK9 (ENSACAG00000000140) #28 ENSACAG00000000139 ENSACAG00000041194 ENSACAG00000040597 ENSACAG00000027706 ENSACAG00000024154 ENSACAG00000020938 ENSACAG00000045179 ENSACAG00000035367 ENSACAG00000022451 Elapidae ANCESTRAL SPECIES 32 ENSGT00940000153378.b.a.a.b ##11 ENSGT01010000227788 ENSGT00990000205443 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT00390000004859.j #9 ENSGT00390000004859.i #9 ENSGT01030000237813 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00910000144338 Indian cobra MODERN SPECIES 2 ENSNNAG00000009146 ENSNNAG00000009134 ##11 ENSNNAG00000009111 ENSNNAG00000009101 #9 THEM6 (ENSNNAG00000009092) #9 ENSNNAG00000009081 ENSNNAG00000009048 ARC (ENSNNAG00000009036) ADGRB1 (ENSNNAG00000008806) #13 TSNARE1 (ENSNNAG00000008754) #14 ENSNNAG00000008731 ENSNNAG00000008719 ENSNNAG00000008699 PTP4A3 (ENSNNAG00000008666) #17 DENND3 (ENSNNAG00000008602) #20 PTK2 (ENSNNAG00000008291) #22 RPLP1 (ENSNNAG00000008238) AGO2 (ENSNNAG00000008166) #23 CHRAC1 (ENSNNAG00000008151) #24 TRAPPC9 (ENSNNAG00000007932) #27 KCNK9 (ENSNNAG00000007909) #28 CATSPER2 (ENSNNAG00000007890) ENSNNAG00000007870 ENSNNAG00000007846 ENSNNAG00000007818 ENSNNAG00000007795 ENSNNAG00000007748 ENSNNAG00000007720 ENSNNAG00000007702 ENSNNAG00000007637 ENSNNAG00000007599 Elapidae_a DUPLICATION Elapidae_a DUPLICATION Elapidae_a ANCESTRAL SPECIES 103 ENSGT00990000205443.a ENSGT00940000153378.b.a.b ##11 ENSGT01030000235263 ENSGT00390000004859.j #9 ENSGT00390000004859.i #9 ENSGT00940000162197 #7 ENSGT01030000237813 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a.xb #22 ENSGT00940000155113.a.a.wb.a #22 ENSGT00550000074698.j.a ENSGT00940000155239.l #23 ENSGT00940000166127 ENSGT00940000155239.k #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000155113.a.a.wb.a #22 Mainland tiger snake MODERN SPECIES 2380 ENSNSUG00000000542 #22 Blue-lipped sea krait MODERN SPECIES 2638 ENSLLTG00000000838 #22 ENSLLTG00000000847 ENSLLTG00000000921 #23 Elapidae_a ANCESTRAL SPECIES ENSGT00940000155113.a.a.wb.b #22 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000155113.a.a.wb.b #22 Mainland tiger snake MODERN SPECIES 2919 ENSNSUG00000000528 #22 Elapidae_a ANCESTRAL SPECIES 103 ENSGT01010000227788 ENSGT00990000205443.a ENSGT00940000153378.b.a.b ##11 ENSGT01030000235263 ENSGT00390000004859.j #9 ENSGT00390000004859.i #9 ENSGT00940000162197 #7 ENSGT01030000237813 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a.xb #22 ENSGT00940000155113.a.a.wb.a #22 ENSGT00550000074698.j.a ENSGT00940000155239.l #23 ENSGT00940000166127 ENSGT00940000155239.k #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 Blue-lipped sea krait MODERN SPECIES 3004 PTK2 (ENSLLTG00000009486) #22 Acanthophiinae ANCESTRAL SPECIES 104 ENSGT00940000153378.b.a.a.b ##11 ENSGT01010000227788 ENSGT00990000205443.a ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT00390000004859.j #9 ENSGT00390000004859.i #9 ENSGT01030000237813 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a.xb #22 ENSGT00940000155239.k #23 ENSGT00550000074698.j.a ENSGT00940000155239.l #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 Mainland tiger snake MODERN SPECIES 205 SLC45A4 (ENSNSUG00000017032) #18 DENND3 (ENSNSUG00000017033) #20 PTK2 (ENSNSUG00000017034) #22 AGO2 (ENSNSUG00000017954) #23 CHRAC1 (ENSNSUG00000017956) #24 TRAPPC9 (ENSNSUG00000017957) #27 KCNK9 (ENSNSUG00000017958) #28 ENSNSUG00000017959 Eastern brown snake MODERN SPECIES 81 ENSPTXG00000018601 ENSPTXG00000018600 ENSPTXG00000018599 ##11 LYPD2 (ENSPTXG00000018598) #7 ENSPTXG00000018597 #9 THEM6 (ENSPTXG00000018596) #9 ENSPTXG00000018595 #7 ENSPTXG00000018594 ARC (ENSPTXG00000018593) ADGRB1 (ENSPTXG00000018592) #13 TSNARE1 (ENSPTXG00000018591) #14 PTP4A3 (ENSPTXG00000018590) #17 GPR20 (ENSPTXG00000018589) SLC45A4 (ENSPTXG00000018588) #18 DENND3 (ENSPTXG00000018587) #20 PTK2 (ENSPTXG00000015722) #22 RPLP1 (ENSPTXG00000015712) AGO2 (ENSPTXG00000015330) #23 CHRAC1 (ENSPTXG00000015311) #24 TRAPPC9 (ENSPTXG00000015308) #27 ENSPTXG00000015307 #28 KCNK9 (ENSPTXG00000015306) #28 ENSPTXG00000015304 Archelosauria ANCESTRAL SPECIES 5 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT00390000004859.i #9 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT00940000166193 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Archosauria ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT01030000235263 ENSGT01030000239707 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT00940000166193 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 Australian saltwater crocodile MODERN SPECIES ENSCPRG00005013687 ##11 ENSCPRG00005013686 ##11 LYPD2 (ENSCPRG00005013683) #7 ENSCPRG00005013680 #7 ENSCPRG00005013678 ARC (ENSCPRG00005013663) ENSCPRG00005013651 ADGRB1 (ENSCPRG00005013599) #13 ENSCPRG00005013580 TSNARE1 (ENSCPRG00005013571) #14 PTP4A3 (ENSCPRG00005013540) #17 ENSCPRG00005013526 GPR20 (ENSCPRG00005013511) SLC45A4 (ENSCPRG00005013508) #18 DENND3 (ENSCPRG00005013464) #20 PTK2 (ENSCPRG00005012596) #22 RPLP1 (ENSCPRG00005012385) AGO2 (ENSCPRG00005012306) #23 CHRAC1 (ENSCPRG00005012301) #24 TRAPPC9 (ENSCPRG00005012204) #27 KCNK9 (ENSCPRG00005012110) #28 ENSCPRG00005012044 #29 ENSCPRG00005012012 ENSCPRG00005011978 #30 ENSCPRG00005011945 #30 KHDRBS3 (ENSCPRG00005011881) #32 ZFAT (ENSCPRG00005011739) #33 ST3GAL1 (ENSCPRG00005011684) #34 NDRG1 (ENSCPRG00005011585) #36 CCN4 (ENSCPRG00005011570) #37 SLA (ENSCPRG00005011507) Aves ANCESTRAL SPECIES 9 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 African ostrich MODERN SPECIES 927 ZC3H12C (ENSSCUG00000017156) RDX (ENSSCUG00000017153) FDX1 (ENSSCUG00000017152) ARHGAP20 (ENSSCUG00000017151) RNF17 (ENSSCUG00000017147) CENPJ (ENSSCUG00000017145) PARP4 (ENSSCUG00000017144) MPHOSPH8 (ENSSCUG00000017142) TSNARE1 (ENSSCUG00000017136) #14 PTP4A3 (ENSSCUG00000017130) #17 ENSSCUG00000017129 GPR20 (ENSSCUG00000017128) SLC45A4 (ENSSCUG00000017124) #18 ENSSCUG00000017122 DENND3 (ENSSCUG00000017116) #20 PTK2 (ENSSCUG00000017108) #22 AGO2 (ENSSCUG00000017100) #23 CHRAC1 (ENSSCUG00000017099) #24 TRAPPC9 (ENSSCUG00000017096) #27 Neognathae ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000163916 ENSGT00940000163557.C ENSGT00940000164558 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 Galloanserae ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215 Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000162943 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000153378.a.a ##11 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C.d #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280.b #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215 Japanese quail MODERN SPECIES 11 TOP1MT (ENSCJPG00005010481) ENSCJPG00005010480 ENSCJPG00005010479 ##11 ENSCJPG00005010478 ##11 ENSCJPG00005010477 ##11 ENSCJPG00005010476 ##11 ENSCJPG00005010475 PSCA (ENSCJPG00005010474) #11 ARC (ENSCJPG00005010469) ADGRB1 (ENSCJPG00005010467) #13 TSNARE1 (ENSCJPG00005010465) #14 PTP4A3 (ENSCJPG00005010458) #17 GPR20 (ENSCJPG00005010454) SLC45A4 (ENSCJPG00005010453) #18 DENND3 (ENSCJPG00005010452) #20 PTK2 (ENSCJPG00005010449) #22 RPLP1 (ENSCJPG00005010448) AGO2 (ENSCJPG00005010107) #23 CHRAC1 (ENSCJPG00005010104) #24 TRAPPC9 (ENSCJPG00005010103) #27 KCNK9 (ENSCJPG00005010102) #28 ENSCJPG00005010100 ENSCJPG00005010099 FAM135B (ENSCJPG00005010097) #30 KHDRBS3 (ENSCJPG00005010094) #32 ZFAT (ENSCJPG00005010092) #33 ST3GAL1 (ENSCJPG00005010090) #34 NDRG1 (ENSCJPG00005010088) #36 CCN4 (ENSCJPG00005010087) #37 SLA (ENSCJPG00005010086) TG (ENSCJPG00005008340) Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT01030000236209 ENSGT00940000153378.b.a.b ##11 ENSGT00940000153378.a.a ##11 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C.d #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00940000168748 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000156079 #30 ENSGT00940000157280.b #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215 ENSGT00390000011144 Chicken MODERN SPECIES 11 TOP1MT (ENSGALG00010008081) ENSGALG00010008053 ENSGALG00010008048 ##11 LY6CLEL (ENSGALG00010008037) LY6E (ENSGALG00010008029) ##11 ENSGALG00010007947 ##11 ENSGALG00010007958 PSCA (ENSGALG00010007954) #11 ARC (ENSGALG00010007950) ADGRB1 (ENSGALG00010008211) #13 TSNARE1 (ENSGALG00010008190) #14 PTP4A3 (ENSGALG00010009335) #17 GPR20 (ENSGALG00010009320) SLC45A4 (ENSGALG00010009253) #18 DENND3 (ENSGALG00010009237) #20 PTK2 (ENSGALG00010009159) #22 RPLP1 (ENSGALG00010009113) AGO2 (ENSGALG00010009068) #23 ENSGALG00010009035 TRAPPC9 (ENSGALG00010008999) #27 KCNK9 (ENSGALG00010008973) #28 COL22A1 (ENSGALG00010008946) ENSGALG00010008894 FAM135B (ENSGALG00010008884) #30 KHDRBS3 (ENSGALG00010008852) #32 ZFAT (ENSGALG00010009345) #33 ST3GAL1 (ENSGALG00010009777) #34 NDRG1 (ENSGALG00010009749) #36 WISP1 (ENSGALG00010009736) #37 SLA (ENSGALG00010008176) TG (ENSGALG00010008164) Turkey DUPLICATION Turkey MODERN SPECIES 22 ENSMGAG00000012862 #36 ENSMGAG00000022370 ENSMGAG00000012876 #34 ENSMGAG00000018719 #33 ENSMGAG00000012883 #33 ENSMGAG00000022843 #32 ENSMGAG00000012888 #32 ENSMGAG00000012896 #30 ENSMGAG00000020709 ENSMGAG00000012923 #28 ENSMGAG00000018714 #28 ENSMGAG00000012927 #27 ENSMGAG00000012936 #24 ENSMGAG00000012952 #22 ENSMGAG00000012951 ENSMGAG00000020023 #22 ENSMGAG00000022269 ##22 ENSMGAG00000012942 #23 ENSMGAG00000019028 #20 ENSMGAG00000012966 #20 ENSMGAG00000012969 #18 ENSMGAG00000015881 ENSMGAG00000012972 #17 ENSMGAG00000018853 ENSMGAG00000012979 ENSMGAG00000012984 ENSMGAG00000021273 ENSMGAG00000012987 #11 ENSMGAG00000020757 ##11 ENSMGAG00000012990 ##11 ENSMGAG00000012991 Turkey MODERN SPECIES 22 ENSMGAG00000012853 ENSMGAG00000012860 #37 ENSMGAG00000012862 #36 ENSMGAG00000022370 ENSMGAG00000012876 #34 ENSMGAG00000018719 #33 ENSMGAG00000012883 #33 ENSMGAG00000022843 #32 ENSMGAG00000012888 #32 ENSMGAG00000012896 #30 ENSMGAG00000020709 ENSMGAG00000012923 #28 ENSMGAG00000018714 #28 ENSMGAG00000012927 #27 ENSMGAG00000012936 #24 ENSMGAG00000012952 #22 ENSMGAG00000012951 ENSMGAG00000020023 #22 ENSMGAG00000022269 ##22 ENSMGAG00000012942 #23 ENSMGAG00000019028 #20 ENSMGAG00000012966 #20 ENSMGAG00000012969 #18 ENSMGAG00000015881 ENSMGAG00000012972 #17 ENSMGAG00000018853 ENSMGAG00000012979 ENSMGAG00000012984 ENSMGAG00000021273 ENSMGAG00000012987 #11 ENSMGAG00000020757 ##11 Anatidae ANCESTRAL SPECIES 3 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C.f #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163916 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215 Pink-footed goose MODERN SPECIES 37 ENSABRG00000009052 #20 PTK2 (ENSABRG00000009190) #22 RPLP1 (ENSABRG00000009791) AGO2 (ENSABRG00000009885) #23 CHRAC1 (ENSABRG00000010680) #24 TRAPPC9 (ENSABRG00000010691) #27 KCNK9 (ENSABRG00000010752) #28 ENSABRG00000010840 FAM135B (ENSABRG00000010869) #30 ENSABRG00000000837 KHDRBS3 (ENSABRG00000000861) #32 ZFAT (ENSABRG00000001043) #33 ENSABRG00000001218 ST3GAL1 (ENSABRG00000001315) #34 NDRG1 (ENSABRG00000001330) #36 CCN4 (ENSABRG00000001358) #37 TG (ENSABRG00000001382) Duck DUPLICATION Duck MODERN SPECIES 87 ENSAPLG00000017872 #22 Duck MODERN SPECIES 10 ENSAPLG00000010200 ##11 ENSAPLG00000018242 ##11 ENSAPLG00000010175 ##11 ENSAPLG00000010171 ##11 LYPD2 (ENSAPLG00000029723) #7 ENSAPLG00000029154 PSCA (ENSAPLG00000029276) #11 ARC (ENSAPLG00000001892) ADGRB1 (ENSAPLG00000009536) #13 ENSAPLG00000028784 TSNARE1 (ENSAPLG00000005699) #14 ENSAPLG00000001675 GPR20 (ENSAPLG00000023130) SLC45A4 (ENSAPLG00000014236) #18 ENSAPLG00000027705 #20 ENSAPLG00000011901 #22 RPLP1 (ENSAPLG00000023830) AGO2 (ENSAPLG00000010465) #23 CHRAC1 (ENSAPLG00000030772) #24 TRAPPC9 (ENSAPLG00000010275) #27 KCNK9 (ENSAPLG00000000939) #28 ENSAPLG00000001716 FAM135B (ENSAPLG00000010289) #30 KHDRBS3 (ENSAPLG00000014746) #32 ENSAPLG00000021102 ZFAT (ENSAPLG00000014922) #33 ST3GAL1 (ENSAPLG00000018128) #34 NDRG1 (ENSAPLG00000015644) #36 CCN4 (ENSAPLG00000002582) #37 ENSAPLG00000025021 SLA (ENSAPLG00000003422) Neognathae_b ANCESTRAL SPECIES 3 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000164558 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 Passeriformes ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000153378.a.a ##11 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 Great tit MODERN SPECIES 11 TOP1MT (ENSPMJG00000013178) ENSPMJG00000013177 ##11 ENSPMJG00000013175 ##11 ENSPMJG00000013172 ##11 ENSPMJG00000013171 ##11 ENSPMJG00000013169 ##11 ENSPMJG00000013167 PSCA (ENSPMJG00000013164) #11 ARC (ENSPMJG00000013161) ADGRB1 (ENSPMJG00000013148) #13 TSNARE1 (ENSPMJG00000013139) #14 PTP4A3 (ENSPMJG00000013132) #17 GPR20 (ENSPMJG00000013131) SLC45A4 (ENSPMJG00000013130) #18 DENND3 (ENSPMJG00000013125) #20 PTK2 (ENSPMJG00000011788) #22 RPLP1 (ENSPMJG00000011787) AGO2 (ENSPMJG00000011786) #23 CHRAC1 (ENSPMJG00000011785) #24 TRAPPC9 (ENSPMJG00000011784) #27 KCNK9 (ENSPMJG00000011783) #28 ENSPMJG00000011782 ENSPMJG00000011781 FAM135B (ENSPMJG00000011780) #30 KHDRBS3 (ENSPMJG00000011775) #32 ZFAT (ENSPMJG00000011770) #33 ST3GAL1 (ENSPMJG00000011765) #34 NDRG1 (ENSPMJG00000011763) #36 CCN4 (ENSPMJG00000011762) #37 SLA (ENSPMJG00000011761) TG (ENSPMJG00000011760) Passeriformes_d ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000153378.a.a ##11 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01030000234973 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486.n #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000164558 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 Flycatcher MODERN SPECIES 11 ENSFALG00000009576 ##11 ENSFALG00000009581 ##11 ENSFALG00000027540 ##11 ENSFALG00000009599 ##11 ENSFALG00000009604 PSCA (ENSFALG00000009610) #11 ARC (ENSFALG00000015013) ADGRB1 (ENSFALG00000009314) #13 ENSFALG00000029024 TSNARE1 (ENSFALG00000009283) #14 ENSFALG00000026711 ENSFALG00000000673 #17 GPR20 (ENSFALG00000014503) SLC45A4 (ENSFALG00000008784) #18 DENND3 (ENSFALG00000008780) #20 PTK2 (ENSFALG00000002857) #22 ENSFALG00000026431 AGO2 (ENSFALG00000002838) #23 CHRAC1 (ENSFALG00000026593) #24 TRAPPC9 (ENSFALG00000002813) #27 ENSFALG00000002806 #27 KCNK9 (ENSFALG00000027029) #28 ENSFALG00000014428 FAM135B (ENSFALG00000002758) #30 KHDRBS3 (ENSFALG00000002752) #32 ZFAT (ENSFALG00000002744) #33 ST3GAL1 (ENSFALG00000023420) #34 NDRG1 (ENSFALG00000002723) #36 CCN4 (ENSFALG00000002718) #37 SLA (ENSFALG00000023037) TG (ENSFALG00000002680) Passeriformes_g ANCESTRAL SPECIES 3 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT00940000153378.a.a ##11 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486.n #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000164558 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 Medium ground finch MODERN SPECIES 122 PTP4A3 (ENSGFOG00000006087) #17 GPR20 (ENSGFOG00000006091) SLC45A4 (ENSGFOG00000006097) #18 DENND3 (ENSGFOG00000006118) #20 PTK2 (ENSGFOG00000006205) #22 AGO2 (ENSGFOG00000006341) #23 CHRAC1 (ENSGFOG00000006690) #24 TRAPPC9 (ENSGFOG00000006695) #27 ENSGFOG00000006710 #28 ENSGFOG00000006712 #28 Passeroidea ANCESTRAL SPECIES 2 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000153378.a.a ##11 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486.n #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000164558 ENSGT00940000163129 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 Zebra finch MODERN SPECIES 12 ENSTGUG00000018250 ENSTGUG00000012733 ##11 ENSTGUG00000012732 ##11 ENSTGUG00000028739 ENSTGUG00000022984 ##11 ENSTGUG00000021003 ##11 ENSTGUG00000012729 PSCA (ENSTGUG00000012728) #11 ARC (ENSTGUG00000012727) ADGRB1 (ENSTGUG00000012707) #13 TSNARE1 (ENSTGUG00000012701) #14 PTP4A3 (ENSTGUG00000021872) #17 GPR20 (ENSTGUG00000012699) SLC45A4 (ENSTGUG00000012694) #18 DENND3 (ENSTGUG00000012690) #20 PTK2 (ENSTGUG00000012663) #22 RPLP1 (ENSTGUG00000012661) AGO2 (ENSTGUG00000012652) #23 CHRAC1 (ENSTGUG00000012651) #24 TRAPPC9 (ENSTGUG00000012639) #27 KCNK9 (ENSTGUG00000028788) #28 ENSTGUG00000029365 ENSTGUG00000012624 FAM135B (ENSTGUG00000012621) #30 KHDRBS3 (ENSTGUG00000012611) #32 ZFAT (ENSTGUG00000012603) #33 ST3GAL1 (ENSTGUG00000012594) #34 NDRG1 (ENSTGUG00000012576) #36 CCN4 (ENSTGUG00000012573) #37 SLA (ENSTGUG00000012567) TG (ENSTGUG00000012562) Common canary DUPLICATION Common canary MODERN SPECIES 794 ENSSCAG00000002279 #22 Common canary MODERN SPECIES ARC (ENSSCAG00000009135) ADGRB1 (ENSSCAG00000009035) #13 TSNARE1 (ENSSCAG00000008951) #14 PTP4A3 (ENSSCAG00000008906) #17 GPR20 (ENSSCAG00000008884) SLC45A4 (ENSSCAG00000008873) #18 DENND3 (ENSSCAG00000008864) #20 ENSSCAG00000008819 #22 RPLP1 (ENSSCAG00000008813) AGO2 (ENSSCAG00000008805) #23 CHRAC1 (ENSSCAG00000008786) #24 TRAPPC9 (ENSSCAG00000008702) #27 KCNK9 (ENSSCAG00000008607) #28 ENSSCAG00000008586 #29 ENSSCAG00000008564 FAM135B (ENSSCAG00000008555) #30 ENSSCAG00000008508 KHDRBS3 (ENSSCAG00000008494) #32 ZFAT (ENSSCAG00000008486) #33 ST3GAL1 (ENSSCAG00000008475) #34 NDRG1 (ENSSCAG00000008471) #36 CCN4 (ENSSCAG00000008468) #37 SLA (ENSSCAG00000008460) Neognathae_c ANCESTRAL SPECIES 1 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##11 ENSGT00940000153378.b.a.a.a ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b ##11 ENSGT00940000162197 #7 ENSGT01030000235263 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000163557.C ENSGT00940000164558 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159300 ENSGT00940000159104 Kakapo MODERN SPECIES ENSSHBG00005001196 ##11 ENSSHBG00005001197 ##11 ENSSHBG00005001198 ENSSHBG00005001199 ##11 LYPD2 (ENSSHBG00005001200) #7 ENSSHBG00005001201 ENSSHBG00005001202 ARC (ENSSHBG00005001203) ADGRB1 (ENSSHBG00005001204) #13 TSNARE1 (ENSSHBG00005001205) #14 PTP4A3 (ENSSHBG00005001206) #17 GPR20 (ENSSHBG00005001207) SLC45A4 (ENSSHBG00005001208) #18 ENSSHBG00005001209 #20 ENSSHBG00005001210 #20 PTK2 (ENSSHBG00005001211) #22 RPLP1 (ENSSHBG00005001212) AGO2 (ENSSHBG00005001213) #23 CHRAC1 (ENSSHBG00005001214) #24 TRAPPC9 (ENSSHBG00005001215) #27 KCNK9 (ENSSHBG00005001217) #28 ENSSHBG00005001220 ENSSHBG00005001221 FAM135B (ENSSHBG00005001222) #30 KHDRBS3 (ENSSHBG00005001223) #32 ZFAT (ENSSHBG00005001224) #33 ST3GAL1 (ENSSHBG00005001225) #34 NDRG1 (ENSSHBG00005001226) #36 CCN4 (ENSSHBG00005001227) #37 ENSSHBG00005000662 SLA (ENSSHBG00005002333) Golden eagle MODERN SPECIES 20 ENSACCG00020004135 ENSACCG00020004138 ##11 ENSACCG00020004145 ##11 ENSACCG00020004152 ##11 ENSACCG00020004161 ##11 LYPD2 (ENSACCG00020004168) #7 ENSACCG00020004179 PSCA (ENSACCG00020004190) #11 ARC (ENSACCG00020004195) ADGRB1 (ENSACCG00020004228) #13 TSNARE1 (ENSACCG00020004263) #14 PTP4A3 (ENSACCG00020004274) #17 GPR20 (ENSACCG00020004283) SLC45A4 (ENSACCG00020004289) #18 DENND3 (ENSACCG00020004301) #20 PTK2 (ENSACCG00020004371) #22 RPLP1 (ENSACCG00020004407) AGO2 (ENSACCG00020004419) #23 CHRAC1 (ENSACCG00020004433) #24 TRAPPC9 (ENSACCG00020004452) #27 KCNK9 (ENSACCG00020004478) #28 ENSACCG00020004497 ENSACCG00020004510 ENSACCG00020004527 #30 ENSACCG00020000347 #30 KHDRBS3 (ENSACCG00020000376) #32 ZFAT (ENSACCG00020000410) #33 ST3GAL1 (ENSACCG00020000439) #34 NDRG1 (ENSACCG00020000456) #36 CCN4 (ENSACCG00020000483) #37 ENSACCG00020000530 Cryptodira ANCESTRAL SPECIES 22 ENSGT00940000164676 ENSGT00940000161068 ENSGT00940000162747 ENSGT00940000153837.a.a ENSGT00940000162943 ENSGT00940000153378.b.b ##11 ENSGT01030000239707 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT00940000166193 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698.g ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000164558 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Chinese turtle MODERN SPECIES 1134 SLC45A4 (ENSPSIG00000014137) #18 DENND3 (ENSPSIG00000014485) #20 ENSPSIG00000000769 PTK2 (ENSPSIG00000003846) #22 RPLP1 (ENSPSIG00000004041) AGO2 (ENSPSIG00000004064) #23 CHRAC1 (ENSPSIG00000004183) #24 ENSPSIG00000000776 TRAPPC9 (ENSPSIG00000004195) #27 KCNK9 (ENSPSIG00000004215) #28 ENSPSIG00000000779 ENSPSIG00000004222 ENSPSIG00000000788 ENSPSIG00000004345 #30 ENSPSIG00000004351 #30 ENSPSIG00000000795 KHDRBS3 (ENSPSIG00000004366) #32 ZFAT (ENSPSIG00000004396) #33 ENSPSIG00000000801 Testudinoidea ANCESTRAL SPECIES 16 ENSGT00940000153378.b.a.a.a.a ##11 ENSGT00940000153378.b.a.a.a.b ##11 ENSGT00940000153378.b.a.b.a.a ##11 ENSGT00940000162197 #7 ENSGT00390000004859.i #9 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT00940000166193 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698.g ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000164558 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Emydidae ANCESTRAL SPECIES 15 ENSGT00940000153378.b.a.a.a.b ##11 ENSGT00940000153378.b.a.a.b.b ##11 ENSGT00940000153378.b.a.b.a.a ##11 ENSGT00940000162197 #7 ENSGT00390000004859.i #9 ENSGT00940000153378.a.a ##11 ENSGT00940000153378.a.b #11 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT00940000166193 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698.g ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000159308 #29 ENSGT00940000164558 ENSGT00940000156079 #30 ENSGT00940000157280 #32 ENSGT00940000156658 #33 ENSGT00940000154725 #34 ENSGT00950000182872.f.a.b #36 ENSGT00940000158587 #37 ENSGT00940000159104 ENSGT00940000159300 Three-toed box turtle MODERN SPECIES 24 ENSTMTG00000000377 ##11 ENSTMTG00000000346 ##11 LYPD2 (ENSTMTG00000000322) #7 THEM6 (ENSTMTG00000000308) #9 ENSTMTG00000000295 ##11 ENSTMTG00000000282 ENSTMTG00000000262 ARC (ENSTMTG00000000252) ADGRB1 (ENSTMTG00000000135) #13 TSNARE1 (ENSTMTG00000020237) #14 PTP4A3 (ENSTMTG00000020227) #17 ENSTMTG00000020199 GPR20 (ENSTMTG00000020188) SLC45A4 (ENSTMTG00000020178) #18 ENSTMTG00000020169 #20 PTK2 (ENSTMTG00000020097) #22 ENSTMTG00000020081 AGO2 (ENSTMTG00000019370) #23 CHRAC1 (ENSTMTG00000019319) #24 TRAPPC9 (ENSTMTG00000019269) #27 ENSTMTG00000019257 #28 KCNK9 (ENSTMTG00000019248) #28 ENSTMTG00000019228 ENSTMTG00000019203 ENSTMTG00000019149 #30 ENSTMTG00000019087 #30 KHDRBS3 (ENSTMTG00000019040) #32 ENSTMTG00000019019 ZFAT (ENSTMTG00000018733) #33 ST3GAL1 (ENSTMTG00000018689) #34 ENSTMTG00000018673 painted turtle MODERN SPECIES 2424 ENSCPBG00000019069 ENSCPBG00000019071 ##11 ENSCPBG00000019072 ##11 LYPD2 (ENSCPBG00000019073) #7 THEM6 (ENSCPBG00000019074) #9 ENSCPBG00000019075 ##11 PSCA (ENSCPBG00000019077) #11 ARC (ENSCPBG00000019078) ADGRB1 (ENSCPBG00000019081) #13 TSNARE1 (ENSCPBG00000019095) #14 PTP4A3 (ENSCPBG00000019106) #17 ENSCPBG00000019116 GPR20 (ENSCPBG00000019121) SLC45A4 (ENSCPBG00000019127) #18 DENND3 (ENSCPBG00000019131) #20 PTK2 (ENSCPBG00000019149) #22 ENSCPBG00000019180 AGO2 (ENSCPBG00000019183) #23 CHRAC1 (ENSCPBG00000019186) #24 TRAPPC9 (ENSCPBG00000019213) #27 KCNK9 (ENSCPBG00000019611) #28 ENSCPBG00000019617 #29 ENSCPBG00000019626 FAM135B (ENSCPBG00000019633) #30 KHDRBS3 (ENSCPBG00000019654) #32 ZFAT (ENSCPBG00000019667) #33 ST3GAL1 (ENSCPBG00000019674) #34 NDRG1 (ENSCPBG00000019688) #36 CCN4 (ENSCPBG00000019695) #37 ENSCPBG00000019699 ENSCPBG00000019703 Testudinidae ANCESTRAL SPECIES 111 ENSGT00970000197866 ENSGT00940000166193 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698.g ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 2238 ENSCABG00000000605 #22 ENSCABG00000000560 #22 ENSCABG00000000543 AGO2 (ENSCABG00000000467) #23 CHRAC1 (ENSCABG00000000454) #24 TRAPPC9 (ENSCABG00000000390) #27 Abingdon island giant tortoise MODERN SPECIES 2238 ENSCABG00000000605 #22 ENSCABG00000000560 #22 ENSCABG00000000543 AGO2 (ENSCABG00000000467) #23 CHRAC1 (ENSCABG00000000454) #24 TRAPPC9 (ENSCABG00000000390) #27 Goode s thornscrub tortoise MODERN SPECIES 156 ENSGEVG00005014486 ENSGEVG00005014447 GPR20 (ENSGEVG00005014409) SLC45A4 (ENSGEVG00005014385) #18 DENND3 (ENSGEVG00005014317) #20 PTK2 (ENSGEVG00005014062) #22 ENSGEVG00005013974 AGO2 (ENSGEVG00005013907) #23 CHRAC1 (ENSGEVG00005013811) #24 TRAPPC9 (ENSGEVG00005013635) #27 Anura ANCESTRAL SPECIES 207 ENSGT00390000003914 ENSGT00940000157432.C #13 ENSGT01000000214440.A.a.a #14 ENSGT00940000159581 #17 ENSGT00940000166193 ENSGT01040000240444.B ENSGT00950000182914.a.a.a #18 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #27 ENSGT00940000159791 #28 ENSGT00940000164160 ENSGT00940000161019 ENSGT00940000156079 #30 Frog MODERN SPECIES 6 ENSXETG00000042809 arc (ENSXETG00000045973) adgrb1 (ENSXETG00000019150) #13 tsnare1 (ENSXETG00000023632) #14 ENSXETG00000045355 ENSXETG00000036147 ENSXETG00000045004 cox11 (ENSXETG00000023638) ptp4a3 (ENSXETG00000023744) #17 XB5813854 [provisional:ankrd52] (ENSXETG00000023747) gpr20 (ENSXETG00000023749) slc45a4 (ENSXETG00000023750) #18 dennd3 (ENSXETG00000023753) #20 rplp1 (ENSXETG00000023754) ago2 (ENSXETG00000023755) #23 ptk2 (ENSXETG00000023764) #22 ENSXETG00000048310 chrac1 (ENSXETG00000007962) #24 trappc9 (ENSXETG00000023767) #27 kcnk9 (ENSXETG00000038355) #28 ENSXETG00000038065 ENSXETG00000043702 ENSXETG00000046422 fam135b (ENSXETG00000033168) #30 col22a1 (ENSXETG00000034204) #29 ENSXETG00000019414 ENSXETG00000036977 ENSXETG00000042719 khdrbs3 (ENSXETG00000009227) #32 ENSXETG00000045544 zfat (ENSXETG00000020631) #33 Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000013000 ZFAT (ENSLLEG00000013029) #33 ENSLLEG00000013120 ENSLLEG00000013143 ENSLLEG00000013185 THEM6 (ENSLLEG00000013240) #9 ENSLLEG00000013258 ENSLLEG00000013302 ENSLLEG00000013383 GPR20 (ENSLLEG00000013406) SLC45A4 (ENSLLEG00000013430) #18 ENSLLEG00000013531 ENSLLEG00000013555 ENSLLEG00000013580 DENND3 (ENSLLEG00000013633) #20 PTK2 (ENSLLEG00000013830) #22 ENSLLEG00000015343 AGO2 (ENSLLEG00000015411) #23 ENSLLEG00000015828 ENSLLEG00000015849 STK3 (ENSLLEG00000015996) OSR2 (ENSLLEG00000017230) VPS13B (ENSLLEG00000017351) ENSLLEG00000017840 ENSLLEG00000017948 RGS22 (ENSLLEG00000018029) FBXO43 (ENSLLEG00000018985) ENSLLEG00000019053 SPAG1 (ENSLLEG00000019184) ENSLLEG00000020293 RNF19A (ENSLLEG00000020333)