Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 862 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 Euteleostomi ANCESTRAL SPECIES 180 ENSGT00940000159581 #14 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000163557.C ENSGT00940000159308 #27 ENSGT00940000164076.a.b ENSGT00940000164160 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 Sarcopterygii ANCESTRAL SPECIES 202 ENSGT00940000159581 #14 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00970000197161 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 Tetrapoda ANCESTRAL SPECIES 1 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT00940000159581 #14 ENSGT00970000197866 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 Amniota ANCESTRAL SPECIES 3 ENSGT00940000153837.a.a ENSGT00940000162943 ENSGT00940000153378.a.a ##8 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT00450000040324.a ENSGT00940000159581 #14 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00970000197866 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Mammalia ANCESTRAL SPECIES 3 ENSGT00940000161506 ENSGT00730000111514 ENSGT00730000111571 ENSGT00940000162197 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000177637 ENSGT00940000156215 Theria ANCESTRAL SPECIES 7 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00450000040324.a ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000177637 ENSGT00940000156215 Eutheria ANCESTRAL SPECIES 15 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000177637 ENSGT00940000156215 Boreoeutheria ANCESTRAL SPECIES 19 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.e.b ENSGT00940000177637 Euarchontoglires ANCESTRAL SPECIES 19 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.e.b ENSGT00940000177637 Primates ANCESTRAL SPECIES 20 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Haplorrhini ANCESTRAL SPECIES 19 ENSGT00940000164325 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Simiiformes ANCESTRAL SPECIES 20 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Platyrrhini ANCESTRAL SPECIES 17 ENSGT00940000164325 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C.j #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.a #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000167737 ENSGT00940000154158.k.b ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159300 ENSGT00940000159104 Cebidae ANCESTRAL SPECIES 19 ENSGT00940000164325 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C.j #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.a #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000167737 ENSGT00940000154158.k.b ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159300 ENSGT00940000159104 Marmoset MODERN SPECIES 7 LY6K (ENSCJAG00000021484) #7 ENSCJAG00000062378 #8 JRK (ENSCJAG00000021476) #9 ARC (ENSCJAG00000012137) #10 ADGRB1 (ENSCJAG00000010346) #11 ENSCJAG00000010357 #12 ENSCJAG00000083554 #13 PTP4A3 (ENSCJAG00000071027) #14 GPR20 (ENSCJAG00000045235) #15 SLC45A4 (ENSCJAG00000003889) #16 ENSCJAG00000052747 #17 ENSCJAG00000058694 #18 ENSCJAG00000003842 #19 ENSCJAG00000078600 #20 ENSCJAG00000086765 #21 PTK2 (ENSCJAG00000003921) #22 AGO2 (ENSCJAG00000004132) #23 ENSCJAG00000085338 #24 TRAPPC9 (ENSCJAG00000004191) #25 KCNK9 (ENSCJAG00000086842) #26 COL22A1 (ENSCJAG00000004235) #27 FAM135B (ENSCJAG00000004293) #28 ENSCJAG00000052211 #29 ENSCJAG00000058137 #30 ENSCJAG00000042146 #31 ENSCJAG00000039030 #32 ENSCJAG00000077043 #33 ENSCJAG00000075019 #34 ENSCJAG00000069964 #35 ENSCJAG00000004331 #36 ZFAT (ENSCJAG00000004348) #37 Cebidae_a ANCESTRAL SPECIES 150 ENSGT00940000155784.C.i ##20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.a #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 Capuchin MODERN SPECIES 284 SYTL5 (ENSCCAG00000032709) SRPX (ENSCCAG00000025497) ENSCCAG00000021581 ##20 PTK2 (ENSCCAG00000025146) #22 AGO2 (ENSCCAG00000035031) #23 ENSCCAG00000033163 #24 ENSCCAG00000022042 TRAPPC9 (ENSCCAG00000030541) #25 KCNK9 (ENSCCAG00000024965) #26 ENSCCAG00000021082 ENSCCAG00000032083 Bolivian squirrel monkey MODERN SPECIES 195 LYNX1 (ENSSBOG00000024857) SLURP2 (ENSSBOG00000035510) LYPD2 (ENSSBOG00000022892) SLURP1 (ENSSBOG00000025334) THEM6 (ENSSBOG00000027066) LY6K (ENSSBOG00000021017) #7 PSCA (ENSSBOG00000024255) #8 JRK (ENSSBOG00000024810) #9 ARC (ENSSBOG00000009916) #10 ADGRB1 (ENSSBOG00000012102) #11 TSNARE1 (ENSSBOG00000027290) #12 MROH5 (ENSSBOG00000028055) PTP4A3 (ENSSBOG00000034074) #14 SLC45A4 (ENSSBOG00000021245) #16 DENND3 (ENSSBOG00000016014) #20 PTK2 (ENSSBOG00000021376) #22 Mas night monkey MODERN SPECIES 602 GPIHBP1 (ENSANAG00000021409) ##8 GLI4 (ENSANAG00000016700) ZNF696 (ENSANAG00000019329) RHPN1 (ENSANAG00000022794) MAFA (ENSANAG00000021123) ZC3H3 (ENSANAG00000018742) GSDMD (ENSANAG00000019900) MROH6 (ENSANAG00000034518) NAPRT (ENSANAG00000031068) ENSANAG00000019322 PYCR3 (ENSANAG00000025985) ENSANAG00000028633 ZNF623 (ENSANAG00000028785) SLC45A4 (ENSANAG00000032643) #16 DENND3 (ENSANAG00000031248) #20 PTK2 (ENSANAG00000035429) #22 AGO2 (ENSANAG00000027399) #23 CHRAC1 (ENSANAG00000032245) #24 TRAPPC9 (ENSANAG00000023163) #25 KCNK9 (ENSANAG00000020788) #26 COL22A1 (ENSANAG00000028860) #27 FAM135B (ENSANAG00000024544) #28 ENSANAG00000021967 Catarrhini ANCESTRAL SPECIES 15 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Hominoidea ANCESTRAL SPECIES 14 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00910000148395 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725.c ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Gibbon MODERN SPECIES 6 LYPD2 (ENSNLEG00000001310) SLURP1 (ENSNLEG00000001300) THEM6 (ENSNLEG00000001298) ENSNLEG00000029363 #7 PSCA (ENSNLEG00000001284) #8 JRK (ENSNLEG00000001280) #9 ADGRB1 (ENSNLEG00000001670) #11 ENSNLEG00000001660 #12 ENSNLEG00000034800 MROH5 (ENSNLEG00000001633) PTP4A3 (ENSNLEG00000001610) #14 SLC45A4 (ENSNLEG00000001582) #16 ENSNLEG00000001579 DENND3 (ENSNLEG00000001560) #20 ENSNLEG00000033490 PTK2 (ENSNLEG00000001510) #22 AGO2 (ENSNLEG00000001461) #23 ENSNLEG00000030588 #24 ENSNLEG00000029889 ENSNLEG00000018803 TRAPPC9 (ENSNLEG00000001396) #25 KCNK9 (ENSNLEG00000001377) #26 COL22A1 (ENSNLEG00000032227) #27 FAM135B (ENSNLEG00000010778) #28 ENSNLEG00000034974 KHDRBS3 (ENSNLEG00000010766) #36 ZFAT (ENSNLEG00000010576) #37 ST3GAL1 (ENSNLEG00000005865) ENSNLEG00000036242 NDRG1 (ENSNLEG00000005826) CCN4 (ENSNLEG00000030189) Hominidae ANCESTRAL SPECIES 15 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00910000148395 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000163244.d.b.a.b.b.a.a.a.b ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725.c ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Orangutan MODERN SPECIES 21 SLURP1 (ENSPPYG00000019027) THEM6 (ENSPPYG00000018921) ENSPPYG00000035700 #7 PSCA (ENSPPYG00000018919) #8 JRK (ENSPPYG00000018918) #9 ARC (ENSPPYG00000018917) #10 ENSPPYG00000018915 #12 ENSPPYG00000035984 C8orf90 (ENSPPYG00000032741) MROH5 (ENSPPYG00000039561) PTP4A3 (ENSPPYG00000033406) #14 GPR20 (ENSPPYG00000018912) #15 SLC45A4 (ENSPPYG00000018911) #16 DENND3 (ENSPPYG00000018910) #20 ENSPPYG00000031469 PTK2 (ENSPPYG00000018909) #22 AGO2 (ENSPPYG00000018908) #23 CHRAC1 (ENSPPYG00000018907) #24 ENSPPYG00000034298 ENSPPYG00000018905 TRAPPC9 (ENSPPYG00000018904) #25 KCNK9 (ENSPPYG00000018903) #26 COL22A1 (ENSPPYG00000018902) #27 FAM135B (ENSPPYG00000018901) #28 KHDRBS3 (ENSPPYG00000018899) #36 ZFAT (ENSPPYG00000018898) #37 ST3GAL1 (ENSPPYG00000018896) NDRG1 (ENSPPYG00000018895) CCN4 (ENSPPYG00000018894) SLA (ENSPPYG00000018893) TG (ENSPPYG00000018892) Homo/Pan/Gorilla group ANCESTRAL SPECIES 13 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00910000148395 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000163244.d.b.a.b.b.a.a.a.b ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725.c ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Homo/Pan group ANCESTRAL SPECIES 12 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000163244.d.b.a.b.b.a.a.a.b ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725.c ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Pan ANCESTRAL SPECIES 11 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000163244.d.b.a.b.b.a.a.a.b ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725.c ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Chimpanzee MODERN SPECIES 21 SLURP1 (ENSPTRG00000043368) THEM6 (ENSPTRG00000020638) LY6K (ENSPTRG00000020637) #7 PSCA (ENSPTRG00000020636) #8 JRK (ENSPTRG00000048020) #9 ARC (ENSPTRG00000030920) #10 ADGRB1 (ENSPTRG00000020635) #11 TSNARE1 (ENSPTRG00000020633) #12 C8orf90 (ENSPTRG00000051970) MROH5 (ENSPTRG00000044474) PTP4A3 (ENSPTRG00000020631) #14 GPR20 (ENSPTRG00000030922) #15 SLC45A4 (ENSPTRG00000020628) #16 DENND3 (ENSPTRG00000020626) #20 ENSPTRG00000047780 PTK2 (ENSPTRG00000020624) #22 AGO2 (ENSPTRG00000020622) #23 CHRAC1 (ENSPTRG00000049044) #24 ENSPTRG00000048472 TRAPPC9 (ENSPTRG00000020615) #25 KCNK9 (ENSPTRG00000048938) #26 COL22A1 (ENSPTRG00000020613) #27 FAM135B (ENSPTRG00000020611) #28 ENSPTRG00000044953 ENSPTRG00000042207 KHDRBS3 (ENSPTRG00000020608) #36 ZFAT (ENSPTRG00000020607) #37 ST3GAL1 (ENSPTRG00000044747) ENSPTRG00000046571 NDRG1 (ENSPTRG00000020603) CCN4 (ENSPTRG00000020602) Bonobo MODERN SPECIES 21 SLURP1 (ENSPPAG00000006874) THEM6 (ENSPPAG00000043629) LY6K (ENSPPAG00000037331) #7 PSCA (ENSPPAG00000035765) #8 JRK (ENSPPAG00000037812) #9 ARC (ENSPPAG00000000502) #10 ADGRB1 (ENSPPAG00000032958) #11 TSNARE1 (ENSPPAG00000044059) #12 ENSPPAG00000036750 MROH5 (ENSPPAG00000035893) PTP4A3 (ENSPPAG00000038953) #14 GPR20 (ENSPPAG00000002891) #15 SLC45A4 (ENSPPAG00000029066) #16 DENND3 (ENSPPAG00000032948) #20 ENSPPAG00000031187 PTK2 (ENSPPAG00000042953) #22 AGO2 (ENSPPAG00000037787) #23 CHRAC1 (ENSPPAG00000034467) #24 ENSPPAG00000007802 TRAPPC9 (ENSPPAG00000030205) #25 KCNK9 (ENSPPAG00000042017) #26 COL22A1 (ENSPPAG00000038842) #27 FAM135B (ENSPPAG00000041146) #28 ENSPPAG00000032028 KHDRBS3 (ENSPPAG00000043998) #36 ZFAT (ENSPPAG00000030339) #37 ST3GAL1 (ENSPPAG00000039735) NDRG1 (ENSPPAG00000023493) CCN4 (ENSPPAG00000042561) SLA (ENSPPAG00000041911) TG (ENSPPAG00000033957) Human MODERN SPECIES 20 LYPD2 (ENSG00000197353) SLURP1 (ENSG00000126233) THEM6 (ENSG00000130193) LY6K (ENSG00000160886) #7 PSCA (ENSG00000167653) #8 JRK (ENSG00000234616) #9 ARC (ENSG00000198576) #10 ADGRB1 (ENSG00000181790) #11 TSNARE1 (ENSG00000171045) #12 C8orf90 (ENSG00000226490) MROH5 (ENSG00000226807) PTP4A3 (ENSG00000184489) #14 GPR20 (ENSG00000204882) #15 SLC45A4 (ENSG00000022567) #16 DENND3 (ENSG00000105339) #20 PTK2 (ENSG00000169398) #22 AGO2 (ENSG00000123908) #23 CHRAC1 (ENSG00000104472) #24 TRAPPC9 (ENSG00000167632) #25 KCNK9 (ENSG00000169427) #26 COL22A1 (ENSG00000169436) #27 FAM135B (ENSG00000147724) #28 KHDRBS3 (ENSG00000131773) #36 ZFAT (ENSG00000066827) #37 ST3GAL1 (ENSG00000008513) NDRG1 (ENSG00000104419) CCN4 (ENSG00000104415) SLA (ENSG00000155926) TG (ENSG00000042832) PHF20L1 (ENSG00000129292) TMEM71 (ENSG00000165071) Gorilla MODERN SPECIES 21 THEM6 (ENSGGOG00000002369) LY6K (ENSGGOG00000003816) #7 PSCA (ENSGGOG00000003814) #8 JRK (ENSGGOG00000027151) #9 ARC (ENSGGOG00000004690) #10 ADGRB1 (ENSGGOG00000008974) #11 TSNARE1 (ENSGGOG00000036935) #12 ENSGGOG00000042067 C8orf90 (ENSGGOG00000027364) PTP4A3 (ENSGGOG00000037356) #14 GPR20 (ENSGGOG00000010614) #15 ENSGGOG00000024382 SLC45A4 (ENSGGOG00000008028) #16 DENND3 (ENSGGOG00000008013) #20 ENSGGOG00000041196 PTK2 (ENSGGOG00000011147) #22 AGO2 (ENSGGOG00000011412) #23 ENSGGOG00000040367 #24 ENSGGOG00000037266 ENSGGOG00000042061 TRAPPC9 (ENSGGOG00000002105) #25 ENSGGOG00000042932 KCNK9 (ENSGGOG00000037517) #26 COL22A1 (ENSGGOG00000010041) #27 FAM135B (ENSGGOG00000007384) #28 ENSGGOG00000036996 ENSGGOG00000041443 KHDRBS3 (ENSGGOG00000000940) #36 ZFAT (ENSGGOG00000007362) #37 ST3GAL1 (ENSGGOG00000022531) ENSGGOG00000043736 Cercopithecidae ANCESTRAL SPECIES 14 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Cercopithecinae ANCESTRAL SPECIES 16 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Vervet Monkey MODERN SPECIES 27 SLURP1 (ENSCSAG00000009223) THEM6 (ENSCSAG00000009228) LY6K (ENSCSAG00000009240) #7 PSCA (ENSCSAG00000009257) #8 JRK (ENSCSAG00000018632) #9 ARC (ENSCSAG00000018631) #10 ADGRB1 (ENSCSAG00000009366) #11 TSNARE1 (ENSCSAG00000009477) #12 C8orf90 (ENSCSAG00000009489) MROH5 (ENSCSAG00000009511) PTP4A3 (ENSCSAG00000009539) #14 GPR20 (ENSCSAG00000018621) #15 ENSCSAG00000009544 SLC45A4 (ENSCSAG00000009549) #16 DENND3 (ENSCSAG00000009555) #20 PTK2 (ENSCSAG00000009564) #22 AGO2 (ENSCSAG00000009574) #23 CHRAC1 (ENSCSAG00000009577) #24 TRAPPC9 (ENSCSAG00000009603) #25 KCNK9 (ENSCSAG00000009614) #26 ENSCSAG00000009743 FAM135B (ENSCSAG00000009776) #28 KHDRBS3 (ENSCSAG00000009815) #36 ZFAT (ENSCSAG00000009828) #37 ST3GAL1 (ENSCSAG00000009838) NDRG1 (ENSCSAG00000009841) CCN4 (ENSCSAG00000009848) SLA (ENSCSAG00000009852) TG (ENSCSAG00000009878) PHF20L1 (ENSCSAG00000009894) TMEM71 (ENSCSAG00000009905) Cercopithecinae_a ANCESTRAL SPECIES 15 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00910000147568 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Cercopithecinae_b ANCESTRAL SPECIES 9 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00910000147568 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159300 ENSGT00940000159104 Olive baboon MODERN SPECIES 18 LY6K (ENSPANG00000044276) #7 PSCA (ENSPANG00000005745) #8 JRK (ENSPANG00000009437) #9 ARC (ENSPANG00000002588) #10 ADGRB1 (ENSPANG00000015392) #11 ENSPANG00000017580 #12 C8orf90 (ENSPANG00000012866) MROH5 (ENSPANG00000008664) ENSPANG00000030593 #14 GPR20 (ENSPANG00000006579) #15 SLC45A4 (ENSPANG00000025488) #16 DENND3 (ENSPANG00000006229) #20 ENSPANG00000043996 ENSPANG00000041422 ##13 ENSPANG00000035712 PTK2 (ENSPANG00000015685) #22 AGO2 (ENSPANG00000005604) #23 CHRAC1 (ENSPANG00000018908) #24 TRAPPC9 (ENSPANG00000006964) #25 KCNK9 (ENSPANG00000016981) #26 COL22A1 (ENSPANG00000007983) #27 FAM135B (ENSPANG00000019753) #28 ENSPANG00000037515 ENSPANG00000048695 ENSPANG00000042935 KHDRBS3 (ENSPANG00000006134) #36 ENSPANG00000048134 ZFAT (ENSPANG00000017457) #37 ST3GAL1 (ENSPANG00000021484) NDRG1 (ENSPANG00000026080) CCN4 (ENSPANG00000015800) Cercopithecinae_d ANCESTRAL SPECIES 72 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00910000147810 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00910000147568 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00910000147964 Drill MODERN SPECIES 1032 C8orf90 (ENSMLEG00000033766) MROH5 (ENSMLEG00000042913) PTP4A3 (ENSMLEG00000041684) #14 GPR20 (ENSMLEG00000012223) #15 SLC45A4 (ENSMLEG00000040522) #16 ENSMLEG00000022991 DENND3 (ENSMLEG00000033267) #20 ENSMLEG00000043742 PTK2 (ENSMLEG00000030892) #22 AGO2 (ENSMLEG00000038874) #23 CHRAC1 (ENSMLEG00000040398) #24 TRAPPC9 (ENSMLEG00000027613) #25 ENSMLEG00000024566 Sooty mangabey MODERN SPECIES 586 THEM6 (ENSCATG00000042993) LY6K (ENSCATG00000043689) #7 PSCA (ENSCATG00000035662) #8 JRK (ENSCATG00000044794) #9 ARC (ENSCATG00000023773) #10 ADGRB1 (ENSCATG00000030208) #11 TSNARE1 (ENSCATG00000030146) #12 C8orf90 (ENSCATG00000040128) MROH5 (ENSCATG00000034124) PTP4A3 (ENSCATG00000036356) #14 GPR20 (ENSCATG00000000416) #15 SLC45A4 (ENSCATG00000034875) #16 ENSCATG00000019758 DENND3 (ENSCATG00000043316) #20 ENSCATG00000042845 PTK2 (ENSCATG00000015054) #22 AGO2 (ENSCATG00000038820) #23 ENSCATG00000045042 CHRAC1 (ENSCATG00000036088) #24 TRAPPC9 (ENSCATG00000037076) #25 KCNK9 (ENSCATG00000044562) #26 ENSCATG00000016126 Macaca ANCESTRAL SPECIES 14 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00910000147568 ENSGT00510000048543 #24 ENSGT00910000148229 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00910000147964 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 Pig-tailed macaque MODERN SPECIES 146 THEM6 (ENSMNEG00000037253) LY6K (ENSMNEG00000035301) #7 PSCA (ENSMNEG00000031685) #8 JRK (ENSMNEG00000043958) #9 ARC (ENSMNEG00000031158) #10 ADGRB1 (ENSMNEG00000036808) #11 TSNARE1 (ENSMNEG00000042330) #12 ENSMNEG00000030812 C8orf90 (ENSMNEG00000034800) MROH5 (ENSMNEG00000029692) PTP4A3 (ENSMNEG00000041873) #14 GPR20 (ENSMNEG00000004897) #15 SLC45A4 (ENSMNEG00000024497) #16 DENND3 (ENSMNEG00000041197) #20 ENSMNEG00000033517 PTK2 (ENSMNEG00000035528) #22 AGO2 (ENSMNEG00000019904) #23 ENSMNEG00000028578 CHRAC1 (ENSMNEG00000042914) #24 ENSMNEG00000042221 TRAPPC9 (ENSMNEG00000029776) #25 KCNK9 (ENSMNEG00000031135) #26 ENSMNEG00000021185 Macaca_a ANCESTRAL SPECIES 16 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000159966.B #7 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00910000146911 ENSGT00940000155239 #23 ENSGT00940000161627.a.b.b.a.a.a ##30 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00910000147964 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT01100000263543.a.g.b.b.b.b.c.a.a ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 Rhesus MODERN SPECIES 18 SLURP1 (ENSMMUG00000018303) THEM6 (ENSMMUG00000042112) LY6K (ENSMMUG00000019458) #7 PSCA (ENSMMUG00000028899) #8 JRK (ENSMMUG00000022452) #9 ARC (ENSMMUG00000018519) #10 ADGRB1 (ENSMMUG00000019877) #11 TSNARE1 (ENSMMUG00000001432) #12 ENSMMUG00000052421 C8orf90 (ENSMMUG00000055363) MROH5 (ENSMMUG00000028901) PTP4A3 (ENSMMUG00000019392) #14 GPR20 (ENSMMUG00000049586) #15 SLC45A4 (ENSMMUG00000013579) #16 DENND3 (ENSMMUG00000013578) #20 PTK2 (ENSMMUG00000002336) #22 AGO2 (ENSMMUG00000008045) #23 ENSMMUG00000056225 ##30 CHRAC1 (ENSMMUG00000057448) #24 ENSMMUG00000065332 ##13 TRAPPC9 (ENSMMUG00000048066) #25 ENSMMUG00000063726 KCNK9 (ENSMMUG00000045821) #26 ENSMMUG00000045425 COL22A1 (ENSMMUG00000047643) #27 ENSMMUG00000054706 ##13 ENSMMUG00000050990 FAM135B (ENSMMUG00000020326) #28 KHDRBS3 (ENSMMUG00000022248) #36 ZFAT (ENSMMUG00000004918) #37 ENSMMUG00000058738 Crab-eating macaque MODERN SPECIES 18 ENSMFAG00000003844 ENSMFAG00000037171 ##8 ENSMFAG00000042555 THEM6 (ENSMFAG00000057966) LY6K (ENSMFAG00000061014) #7 PSCA (ENSMFAG00000061175) #8 JRK (ENSMFAG00000004225) #9 ADGRB1 (ENSMFAG00000032171) #11 TSNARE1 (ENSMFAG00000044811) #12 MROH5 (ENSMFAG00000031443) ENSMFAG00000045266 #14 GPR20 (ENSMFAG00000051571) #15 SLC45A4 (ENSMFAG00000042422) #16 DENND3 (ENSMFAG00000034459) #20 ENSMFAG00000042048 PTK2 (ENSMFAG00000001164) #22 AGO2 (ENSMFAG00000015384) #23 ENSMFAG00000058355 ##30 CHRAC1 (ENSMFAG00000029360) #24 ENSMFAG00000062151 ##34 TRAPPC9 (ENSMFAG00000044625) #25 KCNK9 (ENSMFAG00000060542) #26 ENSMFAG00000049195 ENSMFAG00000030525 ENSMFAG00000059291 FAM135B (ENSMFAG00000045015) #28 ENSMFAG00000062756 KHDRBS3 (ENSMFAG00000041845) #36 ENSMFAG00000047187 ZFAT (ENSMFAG00000041283) #37 ENSMFAG00000056273 Rhinopithecus ANCESTRAL SPECIES 20 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000170377 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00910000146911 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00980000199292 ENSGT00390000006486 #25 ENSGT00940000159791 #26 Golden snub-nosed monkey MODERN SPECIES 2524 SLURP1 (ENSRROG00000041555) THEM6 (ENSRROG00000009540) ENSRROG00000036654 PSCA (ENSRROG00000003785) #8 JRK (ENSRROG00000032153) #9 ARC (ENSRROG00000024856) #10 ADGRB1 (ENSRROG00000029062) #11 TSNARE1 (ENSRROG00000040938) #12 C8orf90 (ENSRROG00000038712) MROH5 (ENSRROG00000033590) PTP4A3 (ENSRROG00000036049) #14 GPR20 (ENSRROG00000008595) #15 SLC45A4 (ENSRROG00000037530) #16 DENND3 (ENSRROG00000030728) #20 ENSRROG00000043385 PTK2 (ENSRROG00000039869) #22 AGO2 (ENSRROG00000003162) #23 CHRAC1 (ENSRROG00000030598) #24 Black snub-nosed monkey MODERN SPECIES 1211 SLURP1 (ENSRBIG00000044635) THEM6 (ENSRBIG00000017304) ENSRBIG00000007353 PSCA (ENSRBIG00000035552) #8 JRK (ENSRBIG00000030182) #9 ARC (ENSRBIG00000005692) #10 ADGRB1 (ENSRBIG00000039356) #11 TSNARE1 (ENSRBIG00000034038) #12 C8orf90 (ENSRBIG00000034213) MROH5 (ENSRBIG00000042905) PTP4A3 (ENSRBIG00000035342) #14 GPR20 (ENSRBIG00000012417) #15 SLC45A4 (ENSRBIG00000034659) #16 DENND3 (ENSRBIG00000041826) #20 ENSRBIG00000041483 PTK2 (ENSRBIG00000028864) #22 AGO2 (ENSRBIG00000028225) #23 CHRAC1 (ENSRBIG00000042659) #24 ENSRBIG00000041791 TRAPPC9 (ENSRBIG00000032901) #25 KCNK9 (ENSRBIG00000034302) #26 Tarsier MODERN SPECIES 1800 PTK2 (ENSTSYG00000008819) #22 Strepsirrhini ANCESTRAL SPECIES 15 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Bushbaby MODERN SPECIES 177 ENSOGAG00000032664 PTP4A3 (ENSOGAG00000013936) #14 ENSOGAG00000034723 GPR20 (ENSOGAG00000029183) #15 SLC45A4 (ENSOGAG00000008796) #16 DENND3 (ENSOGAG00000008776) #20 PTK2 (ENSOGAG00000008770) #22 AGO2 (ENSOGAG00000007933) #23 CHRAC1 (ENSOGAG00000007931) #24 ENSOGAG00000013931 #25 ENSOGAG00000026598 ENSOGAG00000032293 #25 KCNK9 (ENSOGAG00000013929) #26 COL22A1 (ENSOGAG00000012450) #27 FAM135B (ENSOGAG00000005671) #28 ENSOGAG00000028327 KHDRBS3 (ENSOGAG00000005150) #36 ZFAT (ENSOGAG00000014784) #37 ST3GAL1 (ENSOGAG00000016218) NDRG1 (ENSOGAG00000016213) CCN4 (ENSOGAG00000016211) TG (ENSOGAG00000009756) Lemuriformes ANCESTRAL SPECIES 36 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Mouse lemur MODERN SPECIES 31 LY6D (ENSMICG00000035118) LYNX1 (ENSMICG00000046110) SLURP2 (ENSMICG00000045139) LYPD2 (ENSMICG00000000486) SLURP1 (ENSMICG00000046668) THEM6 (ENSMICG00000027716) PSCA (ENSMICG00000036374) #8 JRK (ENSMICG00000041639) #9 ADGRB1 (ENSMICG00000015976) #11 TSNARE1 (ENSMICG00000000568) #12 C8orf90 (ENSMICG00000047940) MROH5 (ENSMICG00000028942) PTP4A3 (ENSMICG00000030190) #14 SLC45A4 (ENSMICG00000010421) #16 DENND3 (ENSMICG00000010407) #20 PTK2 (ENSMICG00000004440) #22 AGO2 (ENSMICG00000004427) #23 CHRAC1 (ENSMICG00000042491) #24 TRAPPC9 (ENSMICG00000004399) #25 ENSMICG00000045662 ENSMICG00000037374 KCNK9 (ENSMICG00000004397) #26 COL22A1 (ENSMICG00000005224) #27 FAM135B (ENSMICG00000005212) #28 UBE3A (ENSMICG00000027572) ENSMICG00000037691 ATP10A (ENSMICG00000001113) GABRB3 (ENSMICG00000027069) GABRA5 (ENSMICG00000000032) GABRG3 (ENSMICG00000000033) ENSMICG00000027022 Lemuriformes_a ANCESTRAL SPECIES 40 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00940000168748 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Coquerels sifaka MODERN SPECIES 398 LY6D (ENSPCOG00000010018) LYNX1 (ENSPCOG00000023400) SLURP2 (ENSPCOG00000015131) LYPD2 (ENSPCOG00000022486) SLURP1 (ENSPCOG00000012662) THEM6 (ENSPCOG00000020900) PSCA (ENSPCOG00000015330) #8 JRK (ENSPCOG00000026070) #9 ADGRB1 (ENSPCOG00000021749) #11 TSNARE1 (ENSPCOG00000020528) #12 C8orf90 (ENSPCOG00000022315) MROH5 (ENSPCOG00000015704) PTP4A3 (ENSPCOG00000018943) #14 SLC45A4 (ENSPCOG00000019648) #16 DENND3 (ENSPCOG00000018459) #20 PTK2 (ENSPCOG00000025086) #22 AGO2 (ENSPCOG00000023047) #23 CHRAC1 (ENSPCOG00000021396) #24 ENSPCOG00000020151 TRAPPC9 (ENSPCOG00000010829) #25 KCNK9 (ENSPCOG00000019979) #26 ENSPCOG00000023237 ENSPCOG00000000504 FAM135B (ENSPCOG00000020978) #28 KHDRBS3 (ENSPCOG00000023667) #36 ZFAT (ENSPCOG00000025199) #37 ST3GAL1 (ENSPCOG00000024012) NDRG1 (ENSPCOG00000018573) CCN4 (ENSPCOG00000019770) SLA (ENSPCOG00000010906) TG (ENSPCOG00000012664) Greater bamboo lemur DUPLICATION Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 549 ADGRB1 (ENSPSMG00000005190) #11 TSNARE1 (ENSPSMG00000005078) #12 ENSPSMG00000005063 PTP4A3 (ENSPSMG00000005053) #14 GPR20 (ENSPSMG00000005025) #15 SLC45A4 (ENSPSMG00000005020) #16 DENND3 (ENSPSMG00000004961) #20 ENSPSMG00000004909 #22 ENSPSMG00000004896 #22 Greater bamboo lemur MODERN SPECIES 549 ADGRB1 (ENSPSMG00000005190) #11 TSNARE1 (ENSPSMG00000005078) #12 ENSPSMG00000005063 PTP4A3 (ENSPSMG00000005053) #14 GPR20 (ENSPSMG00000005025) #15 SLC45A4 (ENSPSMG00000005020) #16 DENND3 (ENSPSMG00000004961) #20 ENSPSMG00000004909 #22 ENSPSMG00000004896 #22 Greater bamboo lemur MODERN SPECIES 2655 ENSPSMG00000004879 #22 Euarchontoglires_A ANCESTRAL SPECIES 19 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.e.b Tree shrew MODERN SPECIES 1033 PTK2 (ENSTBEG00000003660) #22 ENSTBEG00000003401 #23 Glires ANCESTRAL SPECIES 20 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000177637 Lagomorpha ANCESTRAL SPECIES ENSGT00940000155113.a.a #22 Pika MODERN SPECIES 2478 PTK2 (ENSOPRG00000013154) #22 Rabbit DUPLICATION Rabbit MODERN SPECIES 14 IMPA1 (ENSOCUG00000014535) ENSOCUG00000035758 SNX16 (ENSOCUG00000023666) FABP12 (ENSOCUG00000013189) ENSOCUG00000007445 FABP5 (ENSOCUG00000010425) PAG1 (ENSOCUG00000014767) ENSOCUG00000023452 ZNF704 (ENSOCUG00000016504) ZBTB10 (ENSOCUG00000001857) ENSOCUG00000008247 MRPS28 (ENSOCUG00000000867) HEY1 (ENSOCUG00000016568) STMN2 (ENSOCUG00000008312) ENSOCUG00000000308 ENSOCUG00000035772 #22 IL7 (ENSOCUG00000029611) ZC2HC1A (ENSOCUG00000001124) PKIA (ENSOCUG00000021115) ENSOCUG00000024404 PEX2 (ENSOCUG00000017625) ENSOCUG00000036154 ZFHX4 (ENSOCUG00000001723) ENSOCUG00000025047 HNF4G (ENSOCUG00000012041) ENSOCUG00000021684 CRISPLD1 (ENSOCUG00000009616) PI15 (ENSOCUG00000022299) GDAP1 (ENSOCUG00000007700) JPH1 (ENSOCUG00000007692) ENSOCUG00000030927 Rabbit MODERN SPECIES 682 PTK2 (ENSOCUG00000003282) #22 Rodentia ANCESTRAL SPECIES 19 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Rodentia_B ANCESTRAL SPECIES 17 ENSGT00730000111571 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Myomorpha ANCESTRAL SPECIES 18 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT01040000244443 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Muroidea ANCESTRAL SPECIES 14 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT01040000244443 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Muroidea_A ANCESTRAL SPECIES 9 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT01040000244443 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Cricetidae ANCESTRAL SPECIES 10 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT01040000244443 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Cricetinae ANCESTRAL SPECIES 3 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT01040000244443 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 808 Slurp1 (ENSMAUG00000017663) Them6 (ENSMAUG00000000073) Psca (ENSMAUG00000019289) #8 Jrk (ENSMAUG00000009637) #9 Arc (ENSMAUG00000007812) #10 Mroh4 (ENSMAUG00000016636) Adgrb1 (ENSMAUG00000017581) #11 Gm6569 (ENSMAUG00000013636) ENSMAUG00000012349 Ptp4a3 (ENSMAUG00000014965) #14 Gpr20 (ENSMAUG00000016031) #15 ENSMAUG00000012339 Slc45a4 (ENSMAUG00000012951) #16 Dennd3 (ENSMAUG00000012902) #20 ENSMAUG00000012475 #22 ENSMAUG00000004255 #22 Ago2 (ENSMAUG00000007785) #23 Chrac1 (ENSMAUG00000003929) #24 Trappc9 (ENSMAUG00000005781) #25 ENSMAUG00000006643 Kcnk9 (ENSMAUG00000004861) #26 Golden Hamster MODERN SPECIES 808 Lypd2 (ENSMAUG00000018339) Slurp1 (ENSMAUG00000017663) Them6 (ENSMAUG00000000073) Psca (ENSMAUG00000019289) #8 Jrk (ENSMAUG00000009637) #9 Arc (ENSMAUG00000007812) #10 Mroh4 (ENSMAUG00000016636) Adgrb1 (ENSMAUG00000017581) #11 Gm6569 (ENSMAUG00000013636) ENSMAUG00000012349 Ptp4a3 (ENSMAUG00000014965) #14 Gpr20 (ENSMAUG00000016031) #15 ENSMAUG00000012339 Slc45a4 (ENSMAUG00000012951) #16 Dennd3 (ENSMAUG00000012902) #20 ENSMAUG00000012475 #22 ENSMAUG00000004255 #22 Ago2 (ENSMAUG00000007785) #23 Chrac1 (ENSMAUG00000003929) #24 Trappc9 (ENSMAUG00000005781) #25 ENSMAUG00000006643 Kcnk9 (ENSMAUG00000004861) #26 Chinese hamster chok1gshd MODERN SPECIES 1 Slurp2 (ENSCGRG00001013691) Lypd2 (ENSCGRG00001013365) Slurp1 (ENSCGRG00001015798) Them6 (ENSCGRG00001015372) Psca (ENSCGRG00001013251) #8 Jrk (ENSCGRG00001008321) #9 Arc (ENSCGRG00001010007) #10 Mroh4 (ENSCGRG00001018940) Adgrb1 (ENSCGRG00001012492) #11 Gm6569 (ENSCGRG00001011043) ENSCGRG00001007998 Ptp4a3 (ENSCGRG00001018579) #14 Gpr20 (ENSCGRG00001009487) #15 Slc45a4 (ENSCGRG00001015280) #16 Dennd3 (ENSCGRG00001009394) #20 Ptk2 (ENSCGRG00001017616) #22 Ago2 (ENSCGRG00001013557) #23 Chrac1 (ENSCGRG00001017929) #24 Trappc9 (ENSCGRG00001017331) #25 Kcnk9 (ENSCGRG00001006436) #26 ENSCGRG00001009509 ENSCGRG00001008804 Or2j3 (ENSCGRG00001009983) ENSCGRG00001010145 ENSCGRG00001008825 ENSCGRG00001009632 Or2h15 (ENSCGRG00001007379) ENSCGRG00001008054 ENSCGRG00001007593 ENSCGRG00001014302 ENSCGRG00001009752 Cricetidae_B ANCESTRAL SPECIES 6 ENSGT00730000111571 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Prairie vole MODERN SPECIES 2 Slurp2 (ENSMOCG00000005277) Lypd2 (ENSMOCG00000018807) Slurp1 (ENSMOCG00000019456) Them6 (ENSMOCG00000022648) Psca (ENSMOCG00000022772) #8 Jrk (ENSMOCG00000011136) #9 Arc (ENSMOCG00000014212) #10 Mroh4 (ENSMOCG00000000343) Adgrb1 (ENSMOCG00000016067) #11 Gm6569 (ENSMOCG00000012239) ENSMOCG00000008614 Ptp4a3 (ENSMOCG00000018999) #14 Gpr20 (ENSMOCG00000003252) #15 Slc45a4 (ENSMOCG00000000762) #16 Dennd3 (ENSMOCG00000010331) #20 Ptk2 (ENSMOCG00000020779) #22 Ago2 (ENSMOCG00000000300) #23 ENSMOCG00000019826 Trappc9 (ENSMOCG00000009140) #25 Kcnk9 (ENSMOCG00000006383) #26 Col22a1 (ENSMOCG00000018105) ENSMOCG00000002707 #28 ENSMOCG00000003737 #28 Khdrbs3 (ENSMOCG00000020954) #36 Zfat (ENSMOCG00000018121) #37 St3gal1 (ENSMOCG00000000379) Ndrg1 (ENSMOCG00000012344) Ccn4 (ENSMOCG00000012019) Tg (ENSMOCG00000022735) Sla (ENSMOCG00000020997) Phf20l1 (ENSMOCG00000021213) Northern American deer mouse MODERN SPECIES 12 Lypd2 (ENSPEMG00000011523) Slurp1 (ENSPEMG00000025990) Them6 (ENSPEMG00000014387) Psca (ENSPEMG00000018490) #8 Jrk (ENSPEMG00000029676) #9 Arc (ENSPEMG00000017068) #10 Mroh4 (ENSPEMG00000003300) ENSPEMG00000013061 #11 ENSPEMG00000027795 Gm6569 (ENSPEMG00000019855) ENSPEMG00000020041 Ptp4a3 (ENSPEMG00000019413) #14 Gpr20 (ENSPEMG00000015627) #15 Slc45a4 (ENSPEMG00000011925) #16 Dennd3 (ENSPEMG00000020034) #20 Ptk2 (ENSPEMG00000019854) #22 Ago2 (ENSPEMG00000008137) #23 ENSPEMG00000024935 Chrac1 (ENSPEMG00000025421) #24 Trappc9 (ENSPEMG00000019785) #25 Kcnk9 (ENSPEMG00000030534) #26 Col22a1 (ENSPEMG00000030858) Fam135b (ENSPEMG00000019395) #28 Khdrbs3 (ENSPEMG00000010099) #36 Zfat (ENSPEMG00000016138) #37 ENSPEMG00000009860 St3gal1 (ENSPEMG00000026966) Ndrg1 (ENSPEMG00000000640) Ccn4 (ENSPEMG00000018230) Sla (ENSPEMG00000017713) Tg (ENSPEMG00000010025) Murinae ANCESTRAL SPECIES 10 ENSGT00730000111571 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Mus ANCESTRAL SPECIES 11 ENSGT00730000111571 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00960000192853 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Mus_A ANCESTRAL SPECIES 13 ENSGT00730000111571 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239.o.b #23 ENSGT00960000192853 ENSGT00940000155239.o.a #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Mus_B ANCESTRAL SPECIES 12 ENSGT00730000111571 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239.o.b #23 ENSGT00960000192853 ENSGT00940000155239.o.a #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Mouse MODERN SPECIES 6 Slurp2 (ENSMUSG00000075605) Lypd2 (ENSMUSG00000022595) Slurp1 (ENSMUSG00000022596) Them6 (ENSMUSG00000056665) Psca (ENSMUSG00000022598) #8 Jrk (ENSMUSG00000046380) #9 Arc (ENSMUSG00000022602) #10 Mroh4 (ENSMUSG00000022603) Adgrb1 (ENSMUSG00000034730) #11 Gm6569 (ENSMUSG00000086361) Mroh5 (ENSMUSG00000072487) Ptp4a3 (ENSMUSG00000059895) #14 Gpr20 (ENSMUSG00000045281) #15 Slc45a4 (ENSMUSG00000079020) #16 Dennd3 (ENSMUSG00000036661) #20 Ptk2 (ENSMUSG00000022607) #22 Ago2 (ENSMUSG00000036698) #23 Chrac1 (ENSMUSG00000068391) #24 Trappc9 (ENSMUSG00000047921) #25 Kcnk9 (ENSMUSG00000036760) #26 Col22a1 (ENSMUSG00000079022) Fam135b (ENSMUSG00000036800) #28 Khdrbs3 (ENSMUSG00000022332) #36 Zfat (ENSMUSG00000022335) #37 St3gal1 (ENSMUSG00000013846) Ndrg1 (ENSMUSG00000005125) Ccn4 (ENSMUSG00000005124) Sla (ENSMUSG00000022372) Tg (ENSMUSG00000053469) Phf20l1 (ENSMUSG00000072501) Tmem71 (ENSMUSG00000036944) Mus_C ANCESTRAL SPECIES 28 ENSGT00730000111571 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239.o.b #23 ENSGT00960000192853 ENSGT00940000155239.p #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 spretus MODERN SPECIES 6 Slurp2 (MGP_SPRETEiJ_G0020775) Lypd2 (MGP_SPRETEiJ_G0020774) Slurp1 (MGP_SPRETEiJ_G0020773) Them6 (MGP_SPRETEiJ_G0020772) Psca (MGP_SPRETEiJ_G0020771) #8 Jrk (MGP_SPRETEiJ_G0020770) #9 Arc (MGP_SPRETEiJ_G0020769) #10 Mroh4 (MGP_SPRETEiJ_G0020768) MGP_SPRETEiJ_G0020767 #11 Gm6569 (MGP_SPRETEiJ_G0020766) MGP_SPRETEiJ_G0020765 Ptp4a3 (MGP_SPRETEiJ_G0020764) #14 Gpr20 (MGP_SPRETEiJ_G0020763) #15 Slc45a4 (MGP_SPRETEiJ_G0020762) #16 Dennd3 (MGP_SPRETEiJ_G0020761) #20 Ptk2 (MGP_SPRETEiJ_G0020760) #22 Ago2 (MGP_SPRETEiJ_G0020759) #23 Chrac1 (MGP_SPRETEiJ_G0020758) #24 Trappc9 (MGP_SPRETEiJ_G0020757) #25 Kcnk9 (MGP_SPRETEiJ_G0020756) #26 Col22a1 (MGP_SPRETEiJ_G0020755) Fam135b (MGP_SPRETEiJ_G0020754) #28 Khdrbs3 (MGP_SPRETEiJ_G0020753) #36 Zfat (MGP_SPRETEiJ_G0020752) #37 St3gal1 (MGP_SPRETEiJ_G0020751) Ndrg1 (MGP_SPRETEiJ_G0020750) Ccn4 (MGP_SPRETEiJ_G0020749) MGP_SPRETEiJ_G0020748 Tg (MGP_SPRETEiJ_G0020747) Phf20l1 (MGP_SPRETEiJ_G0020746) Tmem71 (MGP_SPRETEiJ_G0020745) Steppe mouse MODERN SPECIES 2986 Gm6569 (ENSMSIG00000018810) Mroh5 (ENSMSIG00000018827) Ptp4a3 (ENSMSIG00000018977) #14 Gpr20 (ENSMSIG00000019071) #15 Slc45a4 (ENSMSIG00000019078) #16 Dennd3 (ENSMSIG00000019118) #20 Ptk2 (ENSMSIG00000019258) #22 ENSMSIG00000019719 #23 ENSMSIG00000019739 Chrac1 (ENSMSIG00000019743) #24 Trappc9 (ENSMSIG00000019764) #25 ENSMSIG00000020555 #26 Ryukyu mouse MODERN SPECIES 6 Slurp2 (MGP_CAROLIEiJ_G0019877) Lypd2 (MGP_CAROLIEiJ_G0019876) Slurp1 (MGP_CAROLIEiJ_G0019875) Them6 (MGP_CAROLIEiJ_G0019874) Psca (MGP_CAROLIEiJ_G0019873) #8 Jrk (MGP_CAROLIEiJ_G0019872) #9 Arc (MGP_CAROLIEiJ_G0019871) #10 Mroh4 (MGP_CAROLIEiJ_G0019870) Adgrb1 (MGP_CAROLIEiJ_G0019869) #11 Gm6569 (MGP_CAROLIEiJ_G0019868) MGP_CAROLIEiJ_G0019867 Ptp4a3 (MGP_CAROLIEiJ_G0019866) #14 Gpr20 (MGP_CAROLIEiJ_G0019865) #15 Slc45a4 (MGP_CAROLIEiJ_G0019864) #16 Dennd3 (MGP_CAROLIEiJ_G0019863) #20 Ptk2 (MGP_CAROLIEiJ_G0019862) #22 Ago2 (MGP_CAROLIEiJ_G0019861) #23 Chrac1 (MGP_CAROLIEiJ_G0019860) #24 Trappc9 (MGP_CAROLIEiJ_G0019859) #25 Kcnk9 (MGP_CAROLIEiJ_G0019858) #26 Col22a1 (MGP_CAROLIEiJ_G0019857) Fam135b (MGP_CAROLIEiJ_G0019856) #28 Khdrbs3 (MGP_CAROLIEiJ_G0019855) #36 Zfat (MGP_CAROLIEiJ_G0019854) #37 St3gal1 (MGP_CAROLIEiJ_G0019853) Ndrg1 (MGP_CAROLIEiJ_G0019852) Ccn4 (MGP_CAROLIEiJ_G0019851) MGP_CAROLIEiJ_G0019850 Tg (MGP_CAROLIEiJ_G0019849) Phf20l1 (MGP_CAROLIEiJ_G0019848) Tmem71 (MGP_CAROLIEiJ_G0019847) Shrew mouse MODERN SPECIES 8 Slurp2 (MGP_PahariEiJ_G0019883) Lypd2 (MGP_PahariEiJ_G0019882) Slurp1 (MGP_PahariEiJ_G0019881) Them6 (MGP_PahariEiJ_G0019880) Psca (MGP_PahariEiJ_G0019879) #8 Jrk (MGP_PahariEiJ_G0019878) #9 Arc (MGP_PahariEiJ_G0019877) #10 Mroh4 (MGP_PahariEiJ_G0019876) Adgrb1 (MGP_PahariEiJ_G0019875) #11 Gm6569 (MGP_PahariEiJ_G0019874) MGP_PahariEiJ_G0019873 Ptp4a3 (MGP_PahariEiJ_G0019872) #14 Gpr20 (MGP_PahariEiJ_G0019871) #15 Slc45a4 (MGP_PahariEiJ_G0019870) #16 Dennd3 (MGP_PahariEiJ_G0019869) #20 Ptk2 (MGP_PahariEiJ_G0019868) #22 Ago2 (MGP_PahariEiJ_G0019867) #23 Chrac1 (MGP_PahariEiJ_G0019866) #24 Trappc9 (MGP_PahariEiJ_G0019865) #25 Kcnk9 (MGP_PahariEiJ_G0019864) #26 Col22a1 (MGP_PahariEiJ_G0019863) MGP_PahariEiJ_G0019862 Fam135b (MGP_PahariEiJ_G0019861) #28 Khdrbs3 (MGP_PahariEiJ_G0019860) #36 Zfat (MGP_PahariEiJ_G0019859) #37 St3gal1 (MGP_PahariEiJ_G0019858) Ndrg1 (MGP_PahariEiJ_G0019857) Ccn4 (MGP_PahariEiJ_G0019856) Sla (MGP_PahariEiJ_G0019855) Tg (MGP_PahariEiJ_G0019854) Phf20l1 (MGP_PahariEiJ_G0019853) Rat MODERN SPECIES 17 Lypd2 (ENSRNOG00000006058) Slurp1 (ENSRNOG00000005944) Them6 (ENSRNOG00000005929) Psca (ENSRNOG00000061376) #8 Jrk (ENSRNOG00000027238) #9 Arc (ENSRNOG00000043465) #10 Mroh4 (ENSRNOG00000005382) Adgrb1 (ENSRNOG00000029450) #11 AABR07058413.1 (ENSRNOG00000037401) Gm6569 (ENSRNOG00000065138) Mroh5 (ENSRNOG00000032827) Ptp4a3 (ENSRNOG00000007628) #14 Slc45a4 (ENSRNOG00000007818) #16 Dennd3 (ENSRNOG00000010794) #20 RGD1564268 (ENSRNOG00000059955) Ptk2 (ENSRNOG00000007916) #22 Ago2 (ENSRNOG00000008533) #23 Chrac1 (ENSRNOG00000009103) #24 Trappc9 (ENSRNOG00000027569) #25 Kcnk9 (ENSRNOG00000009265) #26 Col22a1 (ENSRNOG00000024824) Fam135b (ENSRNOG00000005159) #28 Rps19l1 (ENSRNOG00000031474) Khdrbs3 (ENSRNOG00000009539) #36 ENSRNOG00000070681 Zfat (ENSRNOG00000025140) #37 ENSRNOG00000067606 AABR07058284.1 (ENSRNOG00000062233) St3gal1 (ENSRNOG00000008209) Ndrg1 (ENSRNOG00000007393) Ccn4 (ENSRNOG00000007078) Upper Galilee mountains blind mole rat MODERN SPECIES 1563 Ly6d (ENSNGAG00000019323) ENSNGAG00000002886 Lypd2 (ENSNGAG00000012150) Slurp1 (ENSNGAG00000015613) Them6 (ENSNGAG00000017349) Psca (ENSNGAG00000018283) #8 Jrk (ENSNGAG00000000303) #9 Arc (ENSNGAG00000000562) #10 Adgrb1 (ENSNGAG00000002210) #11 Gm6569 (ENSNGAG00000010718) Ptp4a3 (ENSNGAG00000012875) #14 Gpr20 (ENSNGAG00000013605) #15 ENSNGAG00000015542 Slc45a4 (ENSNGAG00000016323) #16 Dennd3 (ENSNGAG00000002578) #20 Ptk2 (ENSNGAG00000012523) #22 Ago2 (ENSNGAG00000014556) #23 Chrac1 (ENSNGAG00000000333) #24 Trappc9 (ENSNGAG00000009281) #25 Kcnk9 (ENSNGAG00000015255) #26 ENSNGAG00000013443 #27 Lesser Egyptian jerboa MODERN SPECIES 223 ENSJJAG00000019212 #11 ENSJJAG00000019004 #11 Gm6569 (ENSJJAG00000018857) ENSJJAG00000013660 Ptp4a3 (ENSJJAG00000013243) #14 Gpr20 (ENSJJAG00000011714) #15 ENSJJAG00000013106 Slc45a4 (ENSJJAG00000013200) #16 Dennd3 (ENSJJAG00000011270) #20 ENSJJAG00000010072 Ptk2 (ENSJJAG00000004391) #22 Ago2 (ENSJJAG00000018712) #23 Chrac1 (ENSJJAG00000017631) #24 Trappc9 (ENSJJAG00000016725) #25 Kangaroo rat MODERN SPECIES 401 Ly6d (ENSDORG00000024972) Slurp2 (ENSDORG00000015171) Lypd2 (ENSDORG00000009417) Slurp1 (ENSDORG00000009416) ENSDORG00000028228 Psca (ENSDORG00000023668) #8 Jrk (ENSDORG00000025733) #9 Arc (ENSDORG00000028670) #10 Mroh4 (ENSDORG00000023974) ENSDORG00000005970 #11 ENSDORG00000024177 ENSDORG00000030230 Ptp4a3 (ENSDORG00000015794) #14 ENSDORG00000028864 #16 Dennd3 (ENSDORG00000005645) #20 Ptk2 (ENSDORG00000014660) #22 Ago2 (ENSDORG00000011242) #23 Chrac1 (ENSDORG00000028444) #24 Trappc9 (ENSDORG00000001882) #25 Kcnk9 (ENSDORG00000001880) #26 Col22a1 (ENSDORG00000003304) ENSDORG00000028817 #28 ENSDORG00000006503 #28 Khdrbs3 (ENSDORG00000014595) #36 Zfat (ENSDORG00000007664) #37 St3gal1 (ENSDORG00000005921) ENSDORG00000016104 Ccn4 (ENSDORG00000025677) ENSDORG00000023864 Sla (ENSDORG00000007617) ENSDORG00000029798 Rodentia_A ANCESTRAL SPECIES 18 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280.j #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Hystricomorpha ANCESTRAL SPECIES 12 ENSGT00940000164325 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280.j #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Hystricomorpha_a ANCESTRAL SPECIES 9 ENSGT00730000111571 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280.j #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00940000158506 Hystricomorpha_b ANCESTRAL SPECIES 27 ENSGT00730000111571 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280.j #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00940000158506 Degu DUPLICATION Degu MODERN SPECIES 145 LYPD2 (ENSODEG00000014915) SLURP1 (ENSODEG00000015407) THEM6 (ENSODEG00000014821) PSCA (ENSODEG00000016160) #8 JRK (ENSODEG00000020132) #9 ARC (ENSODEG00000020293) #10 ENSODEG00000014726 ENSODEG00000015115 ADGRB1 (ENSODEG00000014587) #11 C8orf90 (ENSODEG00000015406) ENSODEG00000014827 PTP4A3 (ENSODEG00000014363) #14 GPR20 (ENSODEG00000020297) #15 SLC45A4 (ENSODEG00000014926) #16 DENND3 (ENSODEG00000013810) #20 ENSODEG00000015216 #22 AGO2 (ENSODEG00000014145) #23 ENSODEG00000014549 #24 ENSODEG00000014521 TRAPPC9 (ENSODEG00000014700) #25 KCNK9 (ENSODEG00000015679) #26 ENSODEG00000020212 ENSODEG00000014662 COL22A1 (ENSODEG00000015226) #27 ENSODEG00000015548 #28 ENSODEG00000014642 ENSODEG00000014879 #28 Degu MODERN SPECIES 442 ENSODEG00000000458 #22 ENSODEG00000000433 Long-tailed chinchilla MODERN SPECIES 168 PTK2 (ENSCLAG00000001793) #22 AGO2 (ENSCLAG00000001381) #23 CHRAC1 (ENSCLAG00000001356) #24 TRAPPC9 (ENSCLAG00000004275) #25 KCNK9 (ENSCLAG00000003901) #26 COL22A1 (ENSCLAG00000002922) #27 FAM135B (ENSCLAG00000002324) #28 KHDRBS3 (ENSCLAG00000002164) #36 ZFAT (ENSCLAG00000001985) #37 ST3GAL1 (ENSCLAG00000002721) NDRG1 (ENSCLAG00000002544) CCN4 (ENSCLAG00000002478) SLA (ENSCLAG00000002422) TG (ENSCLAG00000001570) PHF20L1 (ENSCLAG00000001398) ENSCLAG00000001275 Guinea pig MODERN SPECIES 17 LYNX1 (ENSCPOG00000039168) SLURP2 (ENSCPOG00000040257) SLURP1 (ENSCPOG00000032557) THEM6 (ENSCPOG00000021643) PSCA (ENSCPOG00000037123) #8 JRK (ENSCPOG00000024068) #9 ARC (ENSCPOG00000021539) #10 ENSCPOG00000024726 ADGRB1 (ENSCPOG00000008233) #11 C8orf90 (ENSCPOG00000034694) ENSCPOG00000031866 PTP4A3 (ENSCPOG00000039057) #14 GPR20 (ENSCPOG00000036801) #15 ENSCPOG00000019277 #16 DENND3 (ENSCPOG00000006551) #20 PTK2 (ENSCPOG00000000923) #22 AGO2 (ENSCPOG00000010428) #23 CHRAC1 (ENSCPOG00000035581) #24 TRAPPC9 (ENSCPOG00000003396) #25 KCNK9 (ENSCPOG00000005816) #26 COL22A1 (ENSCPOG00000000650) #27 ENSCPOG00000032908 #28 ENSCPOG00000012989 #28 Naked mole-rat female MODERN SPECIES 1 ENSHGLG00000016723 LYPD2 (ENSHGLG00000018769) SLURP1 (ENSHGLG00000039971) THEM6 (ENSHGLG00000013642) PSCA (ENSHGLG00000017427) #8 JRK (ENSHGLG00000042302) #9 ARC (ENSHGLG00000015257) #10 ENSHGLG00000037200 ADGRB1 (ENSHGLG00000005458) #11 C8orf90 (ENSHGLG00000018605) PTP4A3 (ENSHGLG00000014998) #14 GPR20 (ENSHGLG00000020410) #15 SLC45A4 (ENSHGLG00000011156) #16 DENND3 (ENSHGLG00000013884) #20 ENSHGLG00000006809 PTK2 (ENSHGLG00000011805) #22 ENSHGLG00000005548 #23 ENSHGLG00000045046 ENSHGLG00000043891 ENSHGLG00000005293 TRAPPC9 (ENSHGLG00000008781) #25 KCNK9 (ENSHGLG00000041028) #26 ENSHGLG00000015782 #27 ENSHGLG00000014953 #28 ENSHGLG00000021272 ENSHGLG00000045916 ENSHGLG00000006718 #36 ZFAT (ENSHGLG00000012551) #37 ENSHGLG00000021259 ST3GAL1 (ENSHGLG00000041464) NDRG1 (ENSHGLG00000014089) Sciuridae ANCESTRAL SPECIES 17 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280.j #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Marmotini ANCESTRAL SPECIES 10 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280.j #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215.f ENSGT00390000011144 Marmotini_b ANCESTRAL SPECIES 6 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280.j #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215.f ENSGT00390000011144 Arctic ground squirrel MODERN SPECIES 282 LYPD2 (ENSUPAG00010006856) SLURP1 (ENSUPAG00010006841) THEM6 (ENSUPAG00010006827) PSCA (ENSUPAG00010006819) #8 JRK (ENSUPAG00010006807) #9 ARC (ENSUPAG00010006802) #10 ENSUPAG00010006615 ADGRB1 (ENSUPAG00010006555) #11 ENSUPAG00010006551 #12 C8orf90 (ENSUPAG00010006543) ENSUPAG00010006496 PTP4A3 (ENSUPAG00010006486) #14 GPR20 (ENSUPAG00010006477) #15 SLC45A4 (ENSUPAG00010006464) #16 DENND3 (ENSUPAG00010006428) #20 PTK2 (ENSUPAG00010006311) #22 ENSUPAG00010006307 AGO2 (ENSUPAG00010006287) #23 CHRAC1 (ENSUPAG00010006278) #24 TRAPPC9 (ENSUPAG00010006121) #25 Squirrel MODERN SPECIES 70 ZFP41 (ENSSTOG00000022550) LY6H (ENSSTOG00000001914) ENSSTOG00000001472 LY6D (ENSSTOG00000016531) ENSSTOG00000022520 THEM6 (ENSSTOG00000022145) PSCA (ENSSTOG00000008313) #8 JRK (ENSSTOG00000021183) #9 ARC (ENSSTOG00000005258) #10 ADGRB1 (ENSSTOG00000027177) #11 ENSSTOG00000024244 PTP4A3 (ENSSTOG00000019728) #14 GPR20 (ENSSTOG00000005890) #15 SLC45A4 (ENSSTOG00000020502) #16 DENND3 (ENSSTOG00000011809) #20 PTK2 (ENSSTOG00000013107) #22 AGO2 (ENSSTOG00000008113) #23 CHRAC1 (ENSSTOG00000008105) #24 TRAPPC9 (ENSSTOG00000000039) #25 KCNK9 (ENSSTOG00000027592) #26 ENSSTOG00000019372 FAM135B (ENSSTOG00000013996) #28 KHDRBS3 (ENSSTOG00000008710) #36 ZFAT (ENSSTOG00000006903) #37 ST3GAL1 (ENSSTOG00000024282) NDRG1 (ENSSTOG00000027200) CCN4 (ENSSTOG00000024729) ENSSTOG00000012423 SLA (ENSSTOG00000012453) PHF20L1 (ENSSTOG00000012416) TMEM71 (ENSSTOG00000022474) Alpin marmot MODERN SPECIES 18 ENSMMMG00000005836 LYPD2 (ENSMMMG00000005834) SLURP1 (ENSMMMG00000005823) THEM6 (ENSMMMG00000005816) PSCA (ENSMMMG00000005803) #8 JRK (ENSMMMG00000005796) #9 ARC (ENSMMMG00000005789) #10 ENSMMMG00000005762 ENSMMMG00000005725 #11 TSNARE1 (ENSMMMG00000005713) #12 ENSMMMG00000005683 PTP4A3 (ENSMMMG00000005644) #14 GPR20 (ENSMMMG00000005632) #15 SLC45A4 (ENSMMMG00000005608) #16 DENND3 (ENSMMMG00000005523) #20 PTK2 (ENSMMMG00000005381) #22 AGO2 (ENSMMMG00000005337) #23 CHRAC1 (ENSMMMG00000005325) #24 TRAPPC9 (ENSMMMG00000005137) #25 KCNK9 (ENSMMMG00000005117) #26 ENSMMMG00000004920 FAM135B (ENSMMMG00000004861) #28 ENSMMMG00000004798 KHDRBS3 (ENSMMMG00000004785) #36 ZFAT (ENSMMMG00000004348) #37 ST3GAL1 (ENSMMMG00000004307) NDRG1 (ENSMMMG00000004288) CCN4 (ENSMMMG00000004263) SLA (ENSMMMG00000004139) TG (ENSMMMG00000004004) PHF20L1 (ENSMMMG00000003892) Eurasian red squirrel DUPLICATION Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005004569 #22 ENSSVLG00005004553 #22 ENSSVLG00005004513 ENSSVLG00005004498 ENSSVLG00005004488 ENSSVLG00005004462 ENSSVLG00005004447 ENSSVLG00005004423 ENSSVLG00005004354 ENSSVLG00005004345 ENSSVLG00005004326 ENSSVLG00005004312 ENSSVLG00005017769 ENSSVLG00005017749 H1-5 (ENSSVLG00005017730) ENSSVLG00005017713 Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005004569 #22 ENSSVLG00005004553 #22 ENSSVLG00005004513 ENSSVLG00005004498 ENSSVLG00005004488 ENSSVLG00005004462 ENSSVLG00005004447 ENSSVLG00005004423 ENSSVLG00005004354 ENSSVLG00005004345 ENSSVLG00005004326 ENSSVLG00005004312 ENSSVLG00005017769 ENSSVLG00005017749 H1-5 (ENSSVLG00005017730) ENSSVLG00005017713 ENSSVLG00005017687 Eurasian red squirrel MODERN SPECIES LYNX1 (ENSSVLG00005023135) LYPD2 (ENSSVLG00005023079) SLURP1 (ENSSVLG00005023055) THEM6 (ENSSVLG00005023036) PSCA (ENSSVLG00005023011) #8 JRK (ENSSVLG00005022992) #9 ARC (ENSSVLG00005022979) #10 ENSSVLG00005022713 ADGRB1 (ENSSVLG00005022303) #11 ENSSVLG00005022182 MROH5 (ENSSVLG00005021860) PTP4A3 (ENSSVLG00005021774) #14 GPR20 (ENSSVLG00005021746) #15 SLC45A4 (ENSSVLG00005021723) #16 ENSSVLG00005021625 ENSSVLG00005020362 #22 AGO2 (ENSSVLG00005019843) #23 CHRAC1 (ENSSVLG00005019735) #24 TRAPPC9 (ENSSVLG00005019480) #25 ENSSVLG00005019252 KCNK9 (ENSSVLG00005019190) #26 ENSSVLG00005018670 FAM135B (ENSSVLG00005018467) #28 ENSSVLG00005018282 #36 ZFAT (ENSSVLG00005017882) #37 ST3GAL1 (ENSSVLG00005017801) NDRG1 (ENSSVLG00005017455) CCN4 (ENSSVLG00005017264) SLA (ENSSVLG00005016977) TG (ENSSVLG00005016366) PHF20L1 (ENSSVLG00005016179) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 55 ENSSVLG00005020462 #22 Eurasian red squirrel MODERN SPECIES 103 ENSSVLG00005015609 #22 Laurasiatheria ANCESTRAL SPECIES 63 ENSGT00970000197161 ENSGT00940000155113.a.a #22 ENSGT00970000197016 Laurasiatheria_a ANCESTRAL SPECIES 20 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT01040000240949 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Artiodactyla ANCESTRAL SPECIES 20 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT01040000240949 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Suina ANCESTRAL SPECIES 26 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT01040000240949 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Chacoan peccary MODERN SPECIES 114 GPR20 (ENSCWAG00000010586) #15 SLC45A4 (ENSCWAG00000010563) #16 ENSCWAG00000010537 #20 ENSCWAG00000010492 #20 PTK2 (ENSCWAG00000009396) #22 AGO2 (ENSCWAG00000009168) #23 CHRAC1 (ENSCWAG00000009130) #24 TRAPPC9 (ENSCWAG00000008968) #25 KCNK9 (ENSCWAG00000008928) #26 COL22A1 (ENSCWAG00000007875) #27 FAM135B (ENSCWAG00000020207) #28 ENSCWAG00000020195 KHDRBS3 (ENSCWAG00000020158) #36 ZFAT (ENSCWAG00000020112) #37 ST3GAL1 (ENSCWAG00000020091) NDRG1 (ENSCWAG00000020006) CCN4 (ENSCWAG00000019971) SLA (ENSCWAG00000019761) TG (ENSCWAG00000019633) PHF20L1 (ENSCWAG00000019548) Pig MODERN SPECIES 12 LYPD2 (ENSSSCG00000036119) ENSSSCG00000049907 THEM6 (ENSSSCG00000032063) PSCA (ENSSSCG00000035372) #8 JRK (ENSSSCG00000037975) #9 ARC (ENSSSCG00000038965) #10 ENSSSCG00000033726 ADGRB1 (ENSSSCG00000035891) #11 ENSSSCG00000050724 ENSSSCG00000036022 #12 MROH5 (ENSSSCG00000005928) PTP4A3 (ENSSSCG00000036569) #14 GPR20 (ENSSSCG00000021284) #15 SLC45A4 (ENSSSCG00000005930) #16 DENND3 (ENSSSCG00000030831) #20 PTK2 (ENSSSCG00000038397) #22 AGO2 (ENSSSCG00000005935) #23 CHRAC1 (ENSSSCG00000005933) #24 TRAPPC9 (ENSSSCG00000005934) #25 ENSSSCG00000045313 KCNK9 (ENSSSCG00000033397) #26 COL22A1 (ENSSSCG00000005938) #27 FAM135B (ENSSSCG00000005939) #28 KHDRBS3 (ENSSSCG00000005941) #36 ENSSSCG00000040767 ENSSSCG00000045339 ZFAT (ENSSSCG00000030947) #37 ST3GAL1 (ENSSSCG00000005943) NDRG1 (ENSSSCG00000005944) CCN4 (ENSSSCG00000005946) TG (ENSSSCG00000005948) Artiodactyla_a ANCESTRAL SPECIES 20 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Camelidae ANCESTRAL SPECIES 19 ENSGT00940000164325 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT01000000221687 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00940000168748 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Arabian camel MODERN SPECIES 17 SLURP2 (ENSCDRG00005013602) ENSCDRG00005013509 SLURP1 (ENSCDRG00005013458) THEM6 (ENSCDRG00005013436) ENSCDRG00005013386 JRK (ENSCDRG00005013365) #9 ARC (ENSCDRG00005013348) #10 ENSCDRG00005013021 ADGRB1 (ENSCDRG00005011321) #11 ENSCDRG00005011015 #12 ENSCDRG00005010597 PTP4A3 (ENSCDRG00005010470) #14 GPR20 (ENSCDRG00005010449) #15 SLC45A4 (ENSCDRG00005010392) #16 DENND3 (ENSCDRG00005010232) #20 PTK2 (ENSCDRG00005009649) #22 AGO2 (ENSCDRG00005009405) #23 ENSCDRG00005009352 TRAPPC9 (ENSCDRG00005009058) #25 KCNK9 (ENSCDRG00005008973) #26 COL22A1 (ENSCDRG00005008680) #27 FAM135B (ENSCDRG00005008527) #28 KHDRBS3 (ENSCDRG00005008373) #36 ENSCDRG00005008302 ZFAT (ENSCDRG00005007628) #37 ST3GAL1 (ENSCDRG00005007522) NDRG1 (ENSCDRG00005007109) CCN4 (ENSCDRG00005007039) SLA (ENSCDRG00005006863) TG (ENSCDRG00005006354) PHF20L1 (ENSCDRG00005006230) Alpaca MODERN SPECIES 1858 ENSVPAG00000007944 #22 Artiodactyla_b ANCESTRAL SPECIES 20 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240949 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Pecora ANCESTRAL SPECIES 20 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240949 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00970000194344 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Percora_a ANCESTRAL SPECIES 23 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240949 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00970000194344 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Bovidae ANCESTRAL SPECIES 22 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240949 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00970000194344 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Caprinae ANCESTRAL SPECIES 18 ENSGT00730000111571.`b.a ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00970000194344 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Goat MODERN SPECIES 5 LY6E (ENSCHIG00000005488) ##8 CYP11B1 (ENSCHIG00000012278) GML (ENSCHIG00000015469) ##7 ENSCHIG00000021920 LYNX1 (ENSCHIG00000014052) LYPD2 (ENSCHIG00000014595) TSNARE1 (ENSCHIG00000023914) #12 ADGRB1 (ENSCHIG00000018848) #11 ENSCHIG00000009651 ARC (ENSCHIG00000007715) #10 MROH5 (ENSCHIG00000021884) PTP4A3 (ENSCHIG00000008896) #14 GPR20 (ENSCHIG00000008984) #15 SLC45A4 (ENSCHIG00000021060) #16 DENND3 (ENSCHIG00000008841) #20 PTK2 (ENSCHIG00000013943) #22 AGO2 (ENSCHIG00000010156) #23 ENSCHIG00000017172 #24 TRAPPC9 (ENSCHIG00000012324) #25 KCNK9 (ENSCHIG00000022281) #26 FAM135B (ENSCHIG00000016457) #28 ENSCHIG00000019586 KHDRBS3 (ENSCHIG00000016533) #36 ZFAT (ENSCHIG00000013122) #37 ST3GAL1 (ENSCHIG00000021799) NDRG1 (ENSCHIG00000015852) CCN4 (ENSCHIG00000012315) SLA (ENSCHIG00000017077) TG (ENSCHIG00000026405) PHF20L1 (ENSCHIG00000009054) TMEM71 (ENSCHIG00000013935) Rambouillet Sheep MODERN SPECIES 25 ENSOARG00020013707 LY6D (ENSOARG00020013889) ENSOARG00020013946 LYPD2 (ENSOARG00020013987) SLURP1 (ENSOARG00020014023) THEM6 (ENSOARG00020014092) PSCA (ENSOARG00020014124) #8 ENSOARG00020014189 ARC (ENSOARG00020003055) #10 ENSOARG00020003095 ADGRB1 (ENSOARG00020003350) #11 C8orf90 (ENSOARG00020003638) ENSOARG00020003672 PTP4A3 (ENSOARG00020003791) #14 GPR20 (ENSOARG00020003852) #15 PTK2 (ENSOARG00020004232) #22 AGO2 (ENSOARG00020005189) #23 CHRAC1 (ENSOARG00020005226) #24 TRAPPC9 (ENSOARG00020005244) #25 ENSOARG00020005279 KCNK9 (ENSOARG00020005293) #26 COL22A1 (ENSOARG00020005316) #27 FAM135B (ENSOARG00020005425) #28 ENSOARG00020005451 ENSOARG00020005461 KHDRBS3 (ENSOARG00020005495) #36 ZFAT (ENSOARG00020005657) #37 ST3GAL1 (ENSOARG00020005893) NDRG1 (ENSOARG00020005943) TG (ENSOARG00020006257) SLA (ENSOARG00020006379) Bovinae ANCESTRAL SPECIES 18 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240949 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT01080000258935 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Bos ANCESTRAL SPECIES 21 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240949 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT01080000258935 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Bos_b ANCESTRAL SPECIES 25 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240949 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215.f ENSGT00390000011144 Hybrid Bos Indicus MODERN SPECIES 5 SLURP1 (ENSBIXG00005030483) THEM6 (ENSBIXG00005030488) PSCA (ENSBIXG00005030492) #8 JRK (ENSBIXG00005030497) #9 ARC (ENSBIXG00005030501) #10 ENSBIXG00005030522 ADGRB1 (ENSBIXG00005030562) #11 ENSBIXG00005030595 #12 C8orf90 (ENSBIXG00005030674) ENSBIXG00005030691 PTP4A3 (ENSBIXG00005030720) #14 ENSBIXG00005030733 GPR20 (ENSBIXG00005030738) #15 SLC45A4 (ENSBIXG00005030748) #16 DENND3 (ENSBIXG00005030786) #20 PTK2 (ENSBIXG00005030896) #22 AGO2 (ENSBIXG00005031025) #23 CHRAC1 (ENSBIXG00005031033) #24 TRAPPC9 (ENSBIXG00005031060) #25 ENSBIXG00005031093 #26 COL22A1 (ENSBIXG00005031109) #27 FAM135B (ENSBIXG00005031125) #28 KHDRBS3 (ENSBIXG00005031144) #36 ZFAT (ENSBIXG00005031165) #37 NDRG1 (ENSBIXG00005031191) CCN4 (ENSBIXG00005031198) TG (ENSBIXG00005031209) ENSBIXG00005031228 SLA (ENSBIXG00005031229) PHF20L1 (ENSBIXG00005031232) TMEM71 (ENSBIXG00005031248) Cow MODERN SPECIES 5 LYPD2 (ENSBTAG00000016210) SLURP1 (ENSBTAG00000016209) THEM6 (ENSBTAG00000005063) PSCA (ENSBTAG00000047022) #8 JRK (ENSBTAG00000055204) #9 ARC (ENSBTAG00000021639) #10 ENSBTAG00000026340 ADGRB1 (ENSBTAG00000006385) #11 TSNARE1 (ENSBTAG00000009974) #12 ENSBTAG00000046739 PTP4A3 (ENSBTAG00000046467) #14 ENSBTAG00000050186 GPR20 (ENSBTAG00000015985) #15 SLC45A4 (ENSBTAG00000008597) #16 DENND3 (ENSBTAG00000006132) #20 PTK2 (ENSBTAG00000009578) #22 AGO2 (ENSBTAG00000001579) #23 CHRAC1 (ENSBTAG00000020226) #24 TRAPPC9 (ENSBTAG00000013955) #25 KCNK9 (ENSBTAG00000047488) #26 FAM135B (ENSBTAG00000018218) #28 KHDRBS3 (ENSBTAG00000002181) #36 ZFAT (ENSBTAG00000017731) #37 ST3GAL1 (ENSBTAG00000001156) NDRG1 (ENSBTAG00000000711) CCN4 (ENSBTAG00000000707) TG (ENSBTAG00000007823) SLA (ENSBTAG00000007828) PHF20L1 (ENSBTAG00000006869) TMEM71 (ENSBTAG00000017138) DNAAF11 (ENSBTAG00000010548) Bos_a ANCESTRAL SPECIES 43 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT01080000258935 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Domestic yak MODERN SPECIES 9 ENSBGRG00000004207 THEM6 (ENSBGRG00000004183) PSCA (ENSBGRG00000004142) #8 JRK (ENSBGRG00000004131) #9 ENSBGRG00000003858 ENSBGRG00000003810 #11 ENSBGRG00000025275 ENSBGRG00000025252 #12 ENSBGRG00000025239 C8orf90 (ENSBGRG00000025227) ENSBGRG00000025197 PTP4A3 (ENSBGRG00000025148) #14 GPR20 (ENSBGRG00000025134) #15 SLC45A4 (ENSBGRG00000025114) #16 DENND3 (ENSBGRG00000025049) #20 PTK2 (ENSBGRG00000024620) #22 AGO2 (ENSBGRG00000024431) #23 ENSBGRG00000024390 #24 ENSBGRG00000024372 TRAPPC9 (ENSBGRG00000024227) #25 KCNK9 (ENSBGRG00000024198) #26 ENSBGRG00000024178 COL22A1 (ENSBGRG00000024054) #27 FAM135B (ENSBGRG00000023910) #28 ENSBGRG00000023891 KHDRBS3 (ENSBGRG00000023782) #36 ZFAT (ENSBGRG00000022983) #37 ST3GAL1 (ENSBGRG00000022921) NDRG1 (ENSBGRG00000022630) CCN4 (ENSBGRG00000022540) SLA (ENSBGRG00000022497) Wild yak MODERN SPECIES 2653 ENSBMUG00000012467 #14 SLC45A4 (ENSBMUG00000012601) #16 DENND3 (ENSBMUG00000012683) #20 PTK2 (ENSBMUG00000012877) #22 AGO2 (ENSBMUG00000013938) #23 ENSBMUG00000014619 #24 TRAPPC9 (ENSBMUG00000015181) #25 American bison MODERN SPECIES 2974 GPR20 (ENSBBBG00000017735) #15 SLC45A4 (ENSBBBG00000017777) #16 DENND3 (ENSBBBG00000017864) #20 PTK2 (ENSBBBG00000018376) #22 AGO2 (ENSBBBG00000018521) #23 ENSBBBG00000018534 TRAPPC9 (ENSBBBG00000004601) #25 KCNK9 (ENSBBBG00000004606) #26 ENSBBBG00000018603 COL22A1 (ENSBBBG00000004714) #27 FAM135B (ENSBBBG00000004741) #28 KHDRBS3 (ENSBBBG00000018860) #36 ZFAT (ENSBBBG00000004834) #37 ST3GAL1 (ENSBBBG00000019019) NDRG1 (ENSBBBG00000019091) CCN4 (ENSBBBG00000019109) SLA (ENSBBBG00000019161) TG (ENSBBBG00000004969) PHF20L1 (ENSBBBG00000019353) Siberian musk deer MODERN SPECIES 141 ENSMMSG00000000931 #14 GPR20 (ENSMMSG00000000914) #15 SLC45A4 (ENSMMSG00000000861) #16 DENND3 (ENSMMSG00000000721) #20 PTK2 (ENSMMSG00000000298) #22 AGO2 (ENSMMSG00000000171) #23 CHRAC1 (ENSMMSG00000000143) #24 ENSMMSG00000000132 ENSMMSG00000000120 TRAPPC9 (ENSMMSG00000000096) #25 KCNK9 (ENSMMSG00000000011) #26 COL22A1 (ENSMMSG00000021268) #27 ENSMMSG00000021170 FAM135B (ENSMMSG00000021096) #28 ENSMMSG00000021071 KHDRBS3 (ENSMMSG00000020977) #36 ZFAT (ENSMMSG00000020835) #37 ST3GAL1 (ENSMMSG00000020803) NDRG1 (ENSMMSG00000020575) CCN4 (ENSMMSG00000020505) Yarkand deer MODERN SPECIES 13 LY6D (ENSCHYG00000013937) ENSCHYG00000013973 LYPD2 (ENSCHYG00000014023) SLURP1 (ENSCHYG00000014068) THEM6 (ENSCHYG00000014103) ENSCHYG00000014131 JRK (ENSCHYG00000014190) #9 ARC (ENSCHYG00000014210) #10 ENSCHYG00000014280 ADGRB1 (ENSCHYG00000014800) #11 ENSCHYG00000015154 #12 ENSCHYG00000016037 #14 SLC45A4 (ENSCHYG00000016290) #16 DENND3 (ENSCHYG00000016570) #20 ENSCHYG00000017231 PTK2 (ENSCHYG00000017386) #22 ENSCHYG00000019424 AGO2 (ENSCHYG00000019522) #23 ENSCHYG00000019694 ENSCHYG00000019730 TRAPPC9 (ENSCHYG00000019843) #25 ENSCHYG00000021286 KCNK9 (ENSCHYG00000021309) #26 ENSCHYG00000021373 FAM135B (ENSCHYG00000021644) #28 KHDRBS3 (ENSCHYG00000021821) #36 ENSCHYG00000021946 ZFAT (ENSCHYG00000021984) #37 ST3GAL1 (ENSCHYG00000022312) NDRG1 (ENSCHYG00000022407) CCN4 (ENSCHYG00000022627) Cetacea ANCESTRAL SPECIES 17 ENSGT00730000111514 ENSGT00730000111571.ab ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000159581 #14 ENSGT01040000240949 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00500000045333.c.b.a.a ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00390000017996.b.a ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Blue whale MODERN SPECIES 8 ENSBMSG00010013395 ENSBMSG00010013421 ##7 LY6D (ENSBMSG00010013458) LYNX1 (ENSBMSG00010013471) SLURP1 (ENSBMSG00010013497) THEM6 (ENSBMSG00010013507) PSCA (ENSBMSG00010013514) #8 JRK (ENSBMSG00010013525) #9 ARC (ENSBMSG00010013531) #10 ADGRB1 (ENSBMSG00010013553) #11 TSNARE1 (ENSBMSG00010013598) #12 PTP4A3 (ENSBMSG00010013679) #14 GPR20 (ENSBMSG00010013686) #15 SLC45A4 (ENSBMSG00010013703) #16 DENND3 (ENSBMSG00010013733) #20 PTK2 (ENSBMSG00010014034) #22 AGO2 (ENSBMSG00010014922) #23 CHRAC1 (ENSBMSG00010015044) #24 TRAPPC9 (ENSBMSG00010015081) #25 ENSBMSG00010015118 KCNK9 (ENSBMSG00010015140) #26 COL22A1 (ENSBMSG00010015241) #27 FAM135B (ENSBMSG00010015786) #28 ENSBMSG00010015876 #36 ZFAT (ENSBMSG00010015973) #37 ENSBMSG00010016853 ST3GAL1 (ENSBMSG00010016866) NDRG1 (ENSBMSG00010016901) CCN4 (ENSBMSG00010016943) ENSBMSG00010016990 SLA (ENSBMSG00010017050) Odontoceti ANCESTRAL SPECIES 20 ENSGT00730000111514 ENSGT00730000111571.ab ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000159581 #14 ENSGT01040000240949 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00500000045333.c.b.a.a ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00390000017996.b.a ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Sperm whale MODERN SPECIES 6 ZFP41 (ENSPCTG00005014395) LY6H (ENSPCTG00005014505) LY6E (ENSPCTG00005014593) ##8 ENSPCTG00005014680 ENSPCTG00005014909 ##7 ENSPCTG00005014963 #7 TSNARE1 (ENSPCTG00005014986) #12 ADGRB1 (ENSPCTG00005015167) #11 ARC (ENSPCTG00005015916) #10 JRK (ENSPCTG00005015935) #9 PSCA (ENSPCTG00005015964) #8 THEM6 (ENSPCTG00005015996) SLC45A4 (ENSPCTG00005016157) #16 ENSPCTG00005016197 ENSPCTG00005016216 #20 PTK2 (ENSPCTG00005016344) #22 AGO2 (ENSPCTG00005017440) #23 ENSPCTG00005017514 CHRAC1 (ENSPCTG00005017581) #24 TRAPPC9 (ENSPCTG00005017633) #25 ENSPCTG00005017670 #26 COL22A1 (ENSPCTG00005017754) #27 FAM135B (ENSPCTG00005018956) #28 KHDRBS3 (ENSPCTG00005019130) #36 ZFAT (ENSPCTG00005019229) #37 TG (ENSPCTG00005019930) PHF20L1 (ENSPCTG00005020226) TMEM71 (ENSPCTG00005020318) LRRC6 (ENSPCTG00005020472) HHLA1 (ENSPCTG00005020844) ENSPCTG00005020919 Odontoceti_a DUPLICATION Odontoceti_a ANCESTRAL SPECIES 97 ENSGT00970000197161 ENSGT00940000155113.a.a.y #22 Odontoceti_b ANCESTRAL SPECIES 67 ENSGT00970000197161 ENSGT00940000155113.a.a.y #22 Monodontidae ANCESTRAL SPECIES 72 ENSGT00970000197161 ENSGT00940000155113.a.a.y #22 Beluga whale MODERN SPECIES 57 LYNX1 (ENSDLEG00000016418) ENSDLEG00000016398 THEM6 (ENSDLEG00000016390) PSCA (ENSDLEG00000016377) #8 JRK (ENSDLEG00000016371) #9 ARC (ENSDLEG00000016365) #10 ENSDLEG00000016305 #11 ENSDLEG00000016197 #12 PTP4A3 (ENSDLEG00000016173) #14 GPR20 (ENSDLEG00000016169) #15 SLC45A4 (ENSDLEG00000016143) #16 DENND3 (ENSDLEG00000016097) #20 ENSDLEG00000016087 #22 ENSDLEG00000016056 ENSDLEG00000016039 ENSDLEG00000016027 #22 AGO2 (ENSDLEG00000015375) #23 CHRAC1 (ENSDLEG00000015313) #24 ENSDLEG00000015306 TRAPPC9 (ENSDLEG00000014691) #25 KCNK9 (ENSDLEG00000014643) #26 ENSDLEG00000014618 #27 FAM135B (ENSDLEG00000014488) #28 KHDRBS3 (ENSDLEG00000014471) #36 ENSDLEG00000014454 ZFAT (ENSDLEG00000014402) #37 ENSDLEG00000014389 ST3GAL1 (ENSDLEG00000014361) ENSDLEG00000014340 NDRG1 (ENSDLEG00000014229) ENSDLEG00000014206 Odontoceti_a ANCESTRAL SPECIES 17 ENSGT00730000111514 ENSGT00730000111571.ab ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000159581 #14 ENSGT01040000240949 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a.z #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00500000045333.c.b.a.a ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00390000017996.b.a ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Dolphin MODERN SPECIES 1763 PTK2 (ENSTTRG00000009800) #22 Odontoceti_b ANCESTRAL SPECIES 19 ENSGT00730000111514 ENSGT00730000111571.ab ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000159581 #14 ENSGT01040000240949 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a.z #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00390000006486 #25 ENSGT00500000045333.c.b.a.a ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00390000017996.b.a ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Vaquita MODERN SPECIES 8 LYNX1 (ENSPSNG00000016038) SLURP1 (ENSPSNG00000015902) THEM6 (ENSPSNG00000015842) PSCA (ENSPSNG00000015788) #8 JRK (ENSPSNG00000015768) #9 ARC (ENSPSNG00000015743) #10 ADGRB1 (ENSPSNG00000015054) #11 TSNARE1 (ENSPSNG00000015005) #12 C8orf90 (ENSPSNG00000014801) PTP4A3 (ENSPSNG00000014669) #14 ENSPSNG00000014557 GPR20 (ENSPSNG00000014525) #15 SLC45A4 (ENSPSNG00000014498) #16 ENSPSNG00000014438 #20 ENSPSNG00000014401 #20 PTK2 (ENSPSNG00000014133) #22 AGO2 (ENSPSNG00000013974) #23 CHRAC1 (ENSPSNG00000013879) #24 ENSPSNG00000013845 TRAPPC9 (ENSPSNG00000013768) #25 KCNK9 (ENSPSNG00000013694) #26 COL22A1 (ENSPSNG00000012298) #27 FAM135B (ENSPSNG00000011969) #28 KHDRBS3 (ENSPSNG00000011841) #36 ZFAT (ENSPSNG00000011653) #37 ENSPSNG00000011623 ENSPSNG00000011603 ST3GAL1 (ENSPSNG00000011560) NDRG1 (ENSPSNG00000018164) CCN4 (ENSPSNG00000018093) SLA (ENSPSNG00000017911) Monodontidae ANCESTRAL SPECIES 20 ENSGT00940000161506 ENSGT00940000159966.B #7 ENSGT00730000111514 ENSGT00730000111571.ab ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a.z #22 ENSGT00940000155239 #23 ENSGT00510000048543.j #24 ENSGT00500000045333.c.b.a.a ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00500000045333.d ENSGT00940000156658 #37 ENSGT00390000017996.b.a ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 Beluga whale MODERN SPECIES 57 ENSDLEG00000016457 ENSDLEG00000016432 #7 LY6D (ENSDLEG00000016424) LYNX1 (ENSDLEG00000016418) ENSDLEG00000016398 THEM6 (ENSDLEG00000016390) PSCA (ENSDLEG00000016377) #8 JRK (ENSDLEG00000016371) #9 ARC (ENSDLEG00000016365) #10 ENSDLEG00000016305 #11 ENSDLEG00000016197 #12 PTP4A3 (ENSDLEG00000016173) #14 GPR20 (ENSDLEG00000016169) #15 SLC45A4 (ENSDLEG00000016143) #16 DENND3 (ENSDLEG00000016097) #20 ENSDLEG00000016087 #22 ENSDLEG00000016056 ENSDLEG00000016039 ENSDLEG00000016027 #22 AGO2 (ENSDLEG00000015375) #23 CHRAC1 (ENSDLEG00000015313) #24 ENSDLEG00000015306 TRAPPC9 (ENSDLEG00000014691) #25 KCNK9 (ENSDLEG00000014643) #26 ENSDLEG00000014618 #27 FAM135B (ENSDLEG00000014488) #28 KHDRBS3 (ENSDLEG00000014471) #36 ENSDLEG00000014454 ZFAT (ENSDLEG00000014402) #37 ENSDLEG00000014389 ST3GAL1 (ENSDLEG00000014361) Narwhal MODERN SPECIES 300 ADGRB1 (ENSMMNG00015002662) #11 ENSMMNG00015002753 #12 ENSMMNG00015002865 #14 GPR20 (ENSMMNG00015002887) #15 SLC45A4 (ENSMMNG00015002902) #16 DENND3 (ENSMMNG00015002943) #20 PTK2 (ENSMMNG00015003058) #22 AGO2 (ENSMMNG00015003211) #23 CHRAC1 (ENSMMNG00015003266) #24 TRAPPC9 (ENSMMNG00015003298) #25 ENSMMNG00015003369 KCNK9 (ENSMMNG00015003378) #26 ENSMMNG00015003507 FAM135B (ENSMMNG00015003770) #28 ENSMMNG00015003849 #36 ENSMMNG00015003895 ZFAT (ENSMMNG00015003925) #37 ENSMMNG00015003987 ST3GAL1 (ENSMMNG00015004001) NDRG1 (ENSMMNG00015004018) CCN4 (ENSMMNG00015004060) TG (ENSMMNG00015004111) Laurasiatheria_b ANCESTRAL SPECIES 20 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT01040000240949 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Laurasiatheria_c ANCESTRAL SPECIES 19 ENSGT00730000111571 ENSGT00940000162197 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Equus ANCESTRAL SPECIES 14 ENSGT00730000111571 ENSGT00940000162197 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Horse MODERN SPECIES 30 LY6D (ENSECAG00000006509) LYPD2 (ENSECAG00000031561) THEM6 (ENSECAG00000037572) JRK (ENSECAG00000006063) #9 ARC (ENSECAG00000001167) #10 ENSECAG00000021955 ADGRB1 (ENSECAG00000031963) #11 ENSECAG00000053596 TSNARE1 (ENSECAG00000017952) #12 MROH5 (ENSECAG00000015811) PTP4A3 (ENSECAG00000030951) #14 GPR20 (ENSECAG00000006027) #15 SLC45A4 (ENSECAG00000002520) #16 DENND3 (ENSECAG00000014691) #20 ENSECAG00000044322 PTK2 (ENSECAG00000014150) #22 AGO2 (ENSECAG00000006078) #23 CHRAC1 (ENSECAG00000059937) #24 TRAPPC9 (ENSECAG00000024191) #25 KCNK9 (ENSECAG00000024032) #26 COL22A1 (ENSECAG00000041368) #27 FAM135B (ENSECAG00000011375) #28 KHDRBS3 (ENSECAG00000010194) #36 ZFAT (ENSECAG00000024767) #37 ENSECAG00000005903 ST3GAL1 (ENSECAG00000021364) NDRG1 (ENSECAG00000025129) CCN4 (ENSECAG00000025050) SLA (ENSECAG00000024065) TG (ENSECAG00000018808) PHF20L1 (ENSECAG00000015107) Donkey MODERN SPECIES 3 LYNX1 (ENSEASG00005023610) LYPD2 (ENSEASG00005021073) THEM6 (ENSEASG00005021076) JRK (ENSEASG00005032295) #9 PSCA (ENSEASG00005038256) #8 ARC (ENSEASG00005021082) #10 ENSEASG00005021088 ENSEASG00005021101 #11 ENSEASG00005021106 TSNARE1 (ENSEASG00005021107) #12 MROH5 (ENSEASG00005025679) ENSEASG00005029842 #14 GPR20 (ENSEASG00005021116) #15 SLC45A4 (ENSEASG00005021121) #16 DENND3 (ENSEASG00005021125) #20 PTK2 (ENSEASG00005021317) #22 AGO2 (ENSEASG00005021922) #23 ENSEASG00005021924 #24 TRAPPC9 (ENSEASG00005021944) #25 KCNK9 (ENSEASG00005027390) #26 ENSEASG00005022014 FAM135B (ENSEASG00005022017) #28 KHDRBS3 (ENSEASG00005022023) #36 ZFAT (ENSEASG00005022029) #37 ST3GAL1 (ENSEASG00005022034) NDRG1 (ENSEASG00005022036) CCN4 (ENSEASG00005026762) TG (ENSEASG00005022050) SLA (ENSEASG00005022081) PHF20L1 (ENSEASG00005022090) TMEM71 (ENSEASG00005022099) Chiroptera ANCESTRAL SPECIES 27 ENSGT00940000159966.A ##7 ENSGT00730000111514 ENSGT00730000111571 ENSGT00940000162197 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300.i ENSGT00940000156215.f ENSGT00390000011144 Megabat MODERN SPECIES 3800 PTK2 (ENSPVAG00000013240) #22 AGO2 (ENSPVAG00000013238) #23 ENSPVAG00000013237 Microchiroptera ANCESTRAL SPECIES 27 ENSGT00940000159966.A ##7 ENSGT00730000111514 ENSGT00730000111571 ENSGT00940000162197 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300.i ENSGT00940000156215.f ENSGT00390000011144 Microbat MODERN SPECIES 1860 PTK2 (ENSMLUG00000010955) #22 Greater horseshoe bat MODERN SPECIES 5 GML (ENSRFEG00010014964) ##7 LY6D (ENSRFEG00010014919) ENSRFEG00010014878 ENSRFEG00010014807 THEM6 (ENSRFEG00010014784) PSCA (ENSRFEG00010014722) #8 ARC (ENSRFEG00010014689) #10 ENSRFEG00010014339 ADGRB1 (ENSRFEG00010014260) #11 ENSRFEG00010014108 #12 MROH5 (ENSRFEG00010013403) PTP4A3 (ENSRFEG00010013219) #14 GPR20 (ENSRFEG00010013194) #15 SLC45A4 (ENSRFEG00010013173) #16 DENND3 (ENSRFEG00010013101) #20 PTK2 (ENSRFEG00010012778) #22 AGO2 (ENSRFEG00010012643) #23 ENSRFEG00010012598 #24 TRAPPC9 (ENSRFEG00010012544) #25 KCNK9 (ENSRFEG00010012493) #26 ENSRFEG00010012449 COL22A1 (ENSRFEG00010010793) #27 FAM135B (ENSRFEG00010010527) #28 KHDRBS3 (ENSRFEG00010010339) #36 ZFAT (ENSRFEG00010019385) #37 ST3GAL1 (ENSRFEG00010019333) NDRG1 (ENSRFEG00010019263) CCN4 (ENSRFEG00010019132) SLA (ENSRFEG00010019049) TG (ENSRFEG00010018495) PHF20L1 (ENSRFEG00010018338) Carnivora ANCESTRAL SPECIES 22 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT01040000240949 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Felidae ANCESTRAL SPECIES 22 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Cat MODERN SPECIES 249 LYPD2 (ENSFCAG00000000126) ENSFCAG00000046944 SLURP1 (ENSFCAG00000032332) THEM6 (ENSFCAG00000041926) PSCA (ENSFCAG00000034685) #8 JRK (ENSFCAG00000038987) #9 ARC (ENSFCAG00000034460) #10 ENSFCAG00000028159 ADGRB1 (ENSFCAG00000005068) #11 TSNARE1 (ENSFCAG00000010752) #12 MROH5 (ENSFCAG00000023728) PTP4A3 (ENSFCAG00000038613) #14 GPR20 (ENSFCAG00000028327) #15 SLC45A4 (ENSFCAG00000010846) #16 DENND3 (ENSFCAG00000015503) #20 PTK2 (ENSFCAG00000014619) #22 AGO2 (ENSFCAG00000002782) #23 ENSFCAG00000040400 TRAPPC9 (ENSFCAG00000023103) #25 KCNK9 (ENSFCAG00000045680) #26 ENSFCAG00000040466 FAM135B (ENSFCAG00000005044) #28 ENSFCAG00000050142 KHDRBS3 (ENSFCAG00000000229) #36 ZFAT (ENSFCAG00000008065) #37 ST3GAL1 (ENSFCAG00000021902) ENSFCAG00000053692 NDRG1 (ENSFCAG00000003212) CCN4 (ENSFCAG00000025709) SLA (ENSFCAG00000041504) TG (ENSFCAG00000011954) Panthera ANCESTRAL SPECIES 16 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000177637 ENSGT00940000156215.f Panthera_a ANCESTRAL SPECIES 16 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000177637 ENSGT00940000156215.f leopard MODERN SPECIES 34 SLURP2 (ENSPPRG00000006355) LYPD2 (ENSPPRG00000006318) THEM6 (ENSPPRG00000006288) PSCA (ENSPPRG00000006245) #8 JRK (ENSPPRG00000019858) #9 ARC (ENSPPRG00000019836) #10 ENSPPRG00000005979 ADGRB1 (ENSPPRG00000005715) #11 TSNARE1 (ENSPPRG00000005532) #12 C8orf90 (ENSPPRG00000004827) ENSPPRG00000004804 PTP4A3 (ENSPPRG00000004614) #14 GPR20 (ENSPPRG00000019718) #15 SLC45A4 (ENSPPRG00000004447) #16 DENND3 (ENSPPRG00000004322) #20 PTK2 (ENSPPRG00000003723) #22 AGO2 (ENSPPRG00000002594) #23 CHRAC1 (ENSPPRG00000002557) #24 TRAPPC9 (ENSPPRG00000002462) #25 KCNK9 (ENSPPRG00000002390) #26 ENSPPRG00000002336 FAM135B (ENSPPRG00000001493) #28 KHDRBS3 (ENSPPRG00000001453) #36 ZFAT (ENSPPRG00000001340) #37 ST3GAL1 (ENSPPRG00000001242) NDRG1 (ENSPPRG00000001214) CCN4 (ENSPPRG00000001054) ENSPPRG00000000896 SLA (ENSPPRG00000000784) PHF20L1 (ENSPPRG00000000672) TMEM71 (ENSPPRG00000000497) lion MODERN SPECIES 509 ENSPLOG00000000620 LYPD2 (ENSPLOG00000000629) SLURP1 (ENSPLOG00000000637) THEM6 (ENSPLOG00000000652) ENSPLOG00000000668 JRK (ENSPLOG00000000682) #9 ARC (ENSPLOG00000000689) #10 ENSPLOG00000000720 ADGRB1 (ENSPLOG00000000796) #11 TSNARE1 (ENSPLOG00000000885) #12 ENSPLOG00000000982 PTP4A3 (ENSPLOG00000001029) #14 GPR20 (ENSPLOG00000001055) #15 SLC45A4 (ENSPLOG00000001065) #16 DENND3 (ENSPLOG00000001097) #20 PTK2 (ENSPLOG00000001166) #22 AGO2 (ENSPLOG00000001314) #23 ENSPLOG00000001430 TRAPPC9 (ENSPLOG00000001450) #25 KCNK9 (ENSPLOG00000001475) #26 ENSPLOG00000001514 FAM135B (ENSPLOG00000001634) #28 KHDRBS3 (ENSPLOG00000001681) #36 ZFAT (ENSPLOG00000001780) #37 ST3GAL1 (ENSPLOG00000001917) NDRG1 (ENSPLOG00000001945) CCN4 (ENSPLOG00000002016) ENSPLOG00000002060 SLA (ENSPLOG00000002109) ENSPLOG00000002148 PHF20L1 (ENSPLOG00000002187) Tiger DUPLICATION Tiger DUPLICATION Tiger MODERN SPECIES 31 LYNX1 (ENSPTIG00000009264) LYPD2 (ENSPTIG00000009254) PSCA (ENSPTIG00000009204) #8 ENSPTIG00000008773 ENSPTIG00000008655 PTP4A3 (ENSPTIG00000008574) #14 SLC45A4 (ENSPTIG00000008447) #16 DENND3 (ENSPTIG00000008002) #20 ENSPTIG00000007956 #22 ENSPTIG00000007841 #22 ENSPTIG00000007828 #22 ENSPTIG00000007717 #22 AGO2 (ENSPTIG00000007438) #23 CHRAC1 (ENSPTIG00000007374) #24 TRAPPC9 (ENSPTIG00000007222) #25 KCNK9 (ENSPTIG00000006923) #26 COL22A1 (ENSPTIG00000005876) #27 FAM135B (ENSPTIG00000005576) #28 KHDRBS3 (ENSPTIG00000005373) #36 ZFAT (ENSPTIG00000003779) #37 ST3GAL1 (ENSPTIG00000002565) NDRG1 (ENSPTIG00000019803) CCN4 (ENSPTIG00000019683) SLA (ENSPTIG00000019360) ENSPTIG00000019133 Tiger MODERN SPECIES 31 LYNX1 (ENSPTIG00000009264) LYPD2 (ENSPTIG00000009254) PSCA (ENSPTIG00000009204) #8 ENSPTIG00000008773 ENSPTIG00000008655 PTP4A3 (ENSPTIG00000008574) #14 SLC45A4 (ENSPTIG00000008447) #16 DENND3 (ENSPTIG00000008002) #20 ENSPTIG00000007956 #22 ENSPTIG00000007841 #22 ENSPTIG00000007828 #22 ENSPTIG00000007717 #22 AGO2 (ENSPTIG00000007438) #23 CHRAC1 (ENSPTIG00000007374) #24 TRAPPC9 (ENSPTIG00000007222) #25 KCNK9 (ENSPTIG00000006923) #26 COL22A1 (ENSPTIG00000005876) #27 FAM135B (ENSPTIG00000005576) #28 KHDRBS3 (ENSPTIG00000005373) #36 ZFAT (ENSPTIG00000003779) #37 ST3GAL1 (ENSPTIG00000002565) NDRG1 (ENSPTIG00000019803) CCN4 (ENSPTIG00000019683) SLA (ENSPTIG00000019360) Tiger DUPLICATION Tiger MODERN SPECIES 31 LYNX1 (ENSPTIG00000009264) LYPD2 (ENSPTIG00000009254) PSCA (ENSPTIG00000009204) #8 ENSPTIG00000008773 ENSPTIG00000008655 PTP4A3 (ENSPTIG00000008574) #14 SLC45A4 (ENSPTIG00000008447) #16 DENND3 (ENSPTIG00000008002) #20 ENSPTIG00000007956 #22 ENSPTIG00000007841 #22 ENSPTIG00000007828 #22 ENSPTIG00000007717 #22 AGO2 (ENSPTIG00000007438) #23 CHRAC1 (ENSPTIG00000007374) #24 TRAPPC9 (ENSPTIG00000007222) #25 KCNK9 (ENSPTIG00000006923) #26 COL22A1 (ENSPTIG00000005876) #27 FAM135B (ENSPTIG00000005576) #28 KHDRBS3 (ENSPTIG00000005373) #36 ZFAT (ENSPTIG00000003779) #37 ST3GAL1 (ENSPTIG00000002565) NDRG1 (ENSPTIG00000019803) CCN4 (ENSPTIG00000019683) SLA (ENSPTIG00000019360) ENSPTIG00000019133 PHF20L1 (ENSPTIG00000018849) TMEM71 (ENSPTIG00000018244) Tiger MODERN SPECIES 31 LYNX1 (ENSPTIG00000009264) LYPD2 (ENSPTIG00000009254) PSCA (ENSPTIG00000009204) #8 ENSPTIG00000008773 ENSPTIG00000008655 PTP4A3 (ENSPTIG00000008574) #14 SLC45A4 (ENSPTIG00000008447) #16 DENND3 (ENSPTIG00000008002) #20 ENSPTIG00000007956 #22 ENSPTIG00000007841 #22 ENSPTIG00000007828 #22 ENSPTIG00000007717 #22 AGO2 (ENSPTIG00000007438) #23 CHRAC1 (ENSPTIG00000007374) #24 TRAPPC9 (ENSPTIG00000007222) #25 KCNK9 (ENSPTIG00000006923) #26 COL22A1 (ENSPTIG00000005876) #27 FAM135B (ENSPTIG00000005576) #28 KHDRBS3 (ENSPTIG00000005373) #36 ZFAT (ENSPTIG00000003779) #37 ST3GAL1 (ENSPTIG00000002565) NDRG1 (ENSPTIG00000019803) CCN4 (ENSPTIG00000019683) SLA (ENSPTIG00000019360) ENSPTIG00000019133 PHF20L1 (ENSPTIG00000018849) Caniformia ANCESTRAL SPECIES 23 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT01040000240949 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Canidae ANCESTRAL SPECIES 33 ENSGT00940000164325 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Canis_lupus ANCESTRAL SPECIES 19 ENSGT00940000164325 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT01050000248409 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f Dog MODERN SPECIES 4 ENSCAFG00845014227 LYPD2 (ENSCAFG00845014195) SLURP1 (ENSCAFG00845014172) THEM6 (ENSCAFG00845014150) PSCA (ENSCAFG00845014135) #8 JRK (ENSCAFG00845014123) #9 ARC (ENSCAFG00845014113) #10 ENSCAFG00845014062 ADGRB1 (ENSCAFG00845013988) #11 ENSCAFG00845013724 #12 MROH5 (ENSCAFG00845013367) PTP4A3 (ENSCAFG00845013289) #14 GPR20 (ENSCAFG00845013261) #15 SLC45A4 (ENSCAFG00845013083) #16 DENND3 (ENSCAFG00845012933) #20 PTK2 (ENSCAFG00845012455) #22 AGO2 (ENSCAFG00845012184) #23 CHRAC1 (ENSCAFG00845012136) #24 TRAPPC9 (ENSCAFG00845011965) #25 KCNK9 (ENSCAFG00845011923) #26 COL22A1 (ENSCAFG00845011558) #27 FAM135B (ENSCAFG00845011345) #28 ENSCAFG00845011290 KHDRBS3 (ENSCAFG00845011046) #36 ZFAT (ENSCAFG00845010442) #37 ST3GAL1 (ENSCAFG00845010238) NDRG1 (ENSCAFG00845009769) CCN4 (ENSCAFG00845009509) SLA (ENSCAFG00845009256) TG (ENSCAFG00845008772) PHF20L1 (ENSCAFG00845008447) Dingo MODERN SPECIES 88 SLURP1 (ENSCAFG00020018582) THEM6 (ENSCAFG00020018579) PSCA (ENSCAFG00020018574) #8 JRK (ENSCAFG00020018570) #9 ENSCAFG00020018567 ARC (ENSCAFG00020018566) #10 ENSCAFG00020018522 ADGRB1 (ENSCAFG00020018429) #11 TSNARE1 (ENSCAFG00020018404) #12 ENSCAFG00020018384 PTP4A3 (ENSCAFG00020018367) #14 GPR20 (ENSCAFG00020018362) #15 SLC45A4 (ENSCAFG00020018358) #16 DENND3 (ENSCAFG00020018348) #20 ENSCAFG00020018346 PTK2 (ENSCAFG00020015459) #22 AGO2 (ENSCAFG00020014198) #23 CHRAC1 (ENSCAFG00020014129) #24 TRAPPC9 (ENSCAFG00020013664) #25 KCNK9 (ENSCAFG00020013626) #26 ENSCAFG00020013620 FAM135B (ENSCAFG00020013611) #28 ENSCAFG00020013598 KHDRBS3 (ENSCAFG00020013570) #36 ZFAT (ENSCAFG00020013483) #37 ENSCAFG00020013460 ST3GAL1 (ENSCAFG00020013456) NDRG1 (ENSCAFG00020013455) CCN4 (ENSCAFG00020013453) SLA (ENSCAFG00020013450) ENSCAFG00020013443 Red fox MODERN SPECIES 202 SLURP1 (ENSVVUG00000013919) THEM6 (ENSVVUG00000013927) PSCA (ENSVVUG00000013929) #8 JRK (ENSVVUG00000013933) #9 ARC (ENSVVUG00000013938) #10 ENSVVUG00000013942 ADGRB1 (ENSVVUG00000013982) #11 TSNARE1 (ENSVVUG00000014254) #12 ENSVVUG00000014278 ENSVVUG00000014293 ENSVVUG00000014299 #14 ENSVVUG00000014301 #14 GPR20 (ENSVVUG00000014304) #15 SLC45A4 (ENSVVUG00000014310) #16 DENND3 (ENSVVUG00000014330) #20 PTK2 (ENSVVUG00000014682) #22 AGO2 (ENSVVUG00000014692) #23 CHRAC1 (ENSVVUG00000014699) #24 TRAPPC9 (ENSVVUG00000014706) #25 ENSVVUG00000014735 KCNK9 (ENSVVUG00000014739) #26 Caniformia_b ANCESTRAL SPECIES 22 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743.d ENSGT01040000240949 ENSGT00940000163743.c ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Mustelinae ANCESTRAL SPECIES 68 ENSGT00940000162197.a ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743.d ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 American mink MODERN SPECIES 167 LYPD2 (ENSNVIG00000014802) SLURP1 (ENSNVIG00000014827) THEM6 (ENSNVIG00000014835) PSCA (ENSNVIG00000014841) #8 JRK (ENSNVIG00000014858) #9 ARC (ENSNVIG00000014874) #10 ENSNVIG00000014885 ADGRB1 (ENSNVIG00000015002) #11 TSNARE1 (ENSNVIG00000015082) #12 ENSNVIG00000015129 PTP4A3 (ENSNVIG00000015173) #14 GPR20 (ENSNVIG00000015219) #15 SLC45A4 (ENSNVIG00000015223) #16 ENSNVIG00000015230 #20 ENSNVIG00000015280 #20 PTK2 (ENSNVIG00000015342) #22 AGO2 (ENSNVIG00000015716) #23 ENSNVIG00000015772 #24 TRAPPC9 (ENSNVIG00000015793) #25 KCNK9 (ENSNVIG00000015902) #26 COL22A1 (ENSNVIG00000015932) #27 FAM135B (ENSNVIG00000016203) #28 ENSNVIG00000016233 KHDRBS3 (ENSNVIG00000016244) #36 ZFAT (ENSNVIG00000016275) #37 ENSNVIG00000016549 Ferret MODERN SPECIES 172 ENSMPUG00000002087 ENSMPUG00000002086 ENSMPUG00000002084 ADGRB1 (ENSMPUG00000002001) #11 ENSMPUG00000001998 ENSMPUG00000019188 TSNARE1 (ENSMPUG00000001976) #12 ENSMPUG00000001975 C8orf90 (ENSMPUG00000001972) MROH5 (ENSMPUG00000001962) PTP4A3 (ENSMPUG00000001950) #14 GPR20 (ENSMPUG00000019185) #15 ENSMPUG00000001947 SLC45A4 (ENSMPUG00000001946) #16 DENND3 (ENSMPUG00000001942) #20 PTK2 (ENSMPUG00000001936) #22 AGO2 (ENSMPUG00000001930) #23 ENSMPUG00000001929 ENSMPUG00000001926 #25 ENSMPUG00000001922 ENSMPUG00000001917 #25 ENSMPUG00000001914 KCNK9 (ENSMPUG00000001908) #26 COL22A1 (ENSMPUG00000001891) #27 ENSMPUG00000001888 FAM135B (ENSMPUG00000001882) #28 KHDRBS3 (ENSMPUG00000001869) #36 ENSMPUG00000001868 ENSMPUG00000001866 ZFAT (ENSMPUG00000001862) #37 ENSMPUG00000019176 Ursidae ANCESTRAL SPECIES 26 ENSGT00940000162197 ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743.d ENSGT01040000240949 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C.s #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 16 ENSAMEG00000010004 MMRN2 (ENSAMEG00000009997) BMPR1A (ENSAMEG00000009972) LDB3 (ENSAMEG00000009941) OPN4 (ENSAMEG00000009912) ENSAMEG00000027199 ENSAMEG00000024384 WAPL (ENSAMEG00000009905) GRID1 (ENSAMEG00000009876) CCSER2 (ENSAMEG00000009866) RGR (ENSAMEG00000009851) LRIT1 (ENSAMEG00000009838) LRIT2 (ENSAMEG00000009834) CDHR1 (ENSAMEG00000009794) GPR15LG (ENSAMEG00000029953) ENSAMEG00000029479 #22 GHITM (ENSAMEG00000009753) NRG3 (ENSAMEG00000002812) ENSAMEG00000030329 ENSAMEG00000027737 SH2D4B (ENSAMEG00000012951) TSPAN14 (ENSAMEG00000013070) PRXL2A (ENSAMEG00000013059) DYDC2 (ENSAMEG00000013056) ENSAMEG00000013050 ENSAMEG00000013025 ENSAMEG00000026411 ENSAMEG00000013016 ENSAMEG00000013003 TMEM254 (ENSAMEG00000012986) PLAC9 (ENSAMEG00000012985) Giant Panda MODERN SPECIES 19 SLURP1 (ENSAMEG00000001401) THEM6 (ENSAMEG00000031034) PSCA (ENSAMEG00000001413) #8 JRK (ENSAMEG00000025092) #9 ARC (ENSAMEG00000001462) #10 ENSAMEG00000001467 ENSAMEG00000027545 ENSAMEG00000001416 #11 ENSAMEG00000001499 #12 ENSAMEG00000001529 ENSAMEG00000028309 PTP4A3 (ENSAMEG00000023758) #14 GPR20 (ENSAMEG00000025864) #15 SLC45A4 (ENSAMEG00000001563) #16 DENND3 (ENSAMEG00000001580) #20 PTK2 (ENSAMEG00000005104) #22 AGO2 (ENSAMEG00000005019) #23 CHRAC1 (ENSAMEG00000005017) #24 TRAPPC9 (ENSAMEG00000024149) #25 KCNK9 (ENSAMEG00000005009) #26 ENSAMEG00000006435 FAM135B (ENSAMEG00000003012) #28 ENSAMEG00000025766 #36 ENSAMEG00000016750 #37 ENSAMEG00000012856 TG (ENSAMEG00000012818) PHF20L1 (ENSAMEG00000012878) TMEM71 (ENSAMEG00000012906) DNAAF11 (ENSAMEG00000012908) KCNQ3 (ENSAMEG00000012923) OC90 (ENSAMEG00000012980) Ursus ANCESTRAL SPECIES 217 ENSGT00730000111514 ENSGT00730000111571 ENSGT00940000153378.a.a ##8 ENSGT00940000162197 ENSGT00940000162933 ENSGT00940000153378.a.b #8 ENSGT00940000162277 #9 ENSGT00450000040324.a ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C.s #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00390000006486 #25 Polar bear MODERN SPECIES 216 LY6D (ENSUMAG00000020419) LYNX1 (ENSUMAG00000020417) ENSUMAG00000020407 ##8 LYPD2 (ENSUMAG00000020402) SLURP1 (ENSUMAG00000020398) PSCA (ENSUMAG00000020395) #8 JRK (ENSUMAG00000020393) #9 ENSUMAG00000020389 ENSUMAG00000020369 ENSUMAG00000020353 PTP4A3 (ENSUMAG00000020350) #14 ENSUMAG00000020343 #16 DENND3 (ENSUMAG00000020261) #20 ENSUMAG00000020237 PTK2 (ENSUMAG00000020192) #22 AGO2 (ENSUMAG00000019572) #23 TRAPPC9 (ENSUMAG00000019186) #25 ENSUMAG00000019160 American black bear DUPLICATION American black bear DUPLICATION American black bear MODERN SPECIES 5487 ENSUAMG00000011999 #22 American black bear MODERN SPECIES 9207 ENSUAMG00000001195 #22 American black bear MODERN SPECIES 5033 PTK2 (ENSUAMG00000022672) #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155113.a.a #22 Common shrew MODERN SPECIES 5020 ENSSARG00000008468 #22 Hedgehog MODERN SPECIES 6452 PTK2 (ENSEEUG00000013097) #22 Atlantogenata ANCESTRAL SPECIES 106 ENSGT00570000080880 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308.n.b #27 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215 ENSGT00390000011144 Xenarthra ANCESTRAL SPECIES 1288 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 Armadillo MODERN SPECIES 1038 GPR20 (ENSDNOG00000025432) #15 SLC45A4 (ENSDNOG00000014979) #16 ENSDNOG00000039123 DENND3 (ENSDNOG00000000994) #20 PTK2 (ENSDNOG00000017110) #22 Sloth MODERN SPECIES 5744 PTK2 (ENSCHOG00000010980) #22 Afrotheria ANCESTRAL SPECIES 10 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215 ENSGT00390000011144 ENSGT00940000158506 Tenrec MODERN SPECIES 6270 ENSETEG00000018006 #22 Afrotheria_a ANCESTRAL SPECIES 10 ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000164160 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215 ENSGT00390000011144 Hyrax MODERN SPECIES 5283 PTK2 (ENSPCAG00000017055) #22 Elephant MODERN SPECIES 567 ENSLAFG00000026802 PTP4A3 (ENSLAFG00000006213) #14 GPR20 (ENSLAFG00000025908) #15 SLC45A4 (ENSLAFG00000010099) #16 DENND3 (ENSLAFG00000015654) #20 PTK2 (ENSLAFG00000007270) #22 AGO2 (ENSLAFG00000012905) #23 CHRAC1 (ENSLAFG00000001188) #24 TRAPPC9 (ENSLAFG00000001660) #25 KCNK9 (ENSLAFG00000008503) #26 ENSLAFG00000009277 FAM135B (ENSLAFG00000004228) #28 KHDRBS3 (ENSLAFG00000004849) #36 ZFAT (ENSLAFG00000010205) #37 ST3GAL1 (ENSLAFG00000029095) NDRG1 (ENSLAFG00000002836) CCN4 (ENSLAFG00000002835) SLA (ENSLAFG00000013718) TG (ENSLAFG00000012474) PHF20L1 (ENSLAFG00000006105) TMEM71 (ENSLAFG00000009515) Marsupialia ANCESTRAL SPECIES 1 ENSGT00940000162197 ENSGT01030000235263.a ENSGT00940000162933 ENSGT00390000004859 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00450000040324.a ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000156079 #28 ENSGT00940000154143.f.d ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215 ENSGT00390000011144 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00730000111571 ENSGT00940000162197 ENSGT01030000235263.a ENSGT00390000004859 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00450000040324.a ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000156079 #28 ENSGT00940000154143.f.d ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215 ENSGT00390000011144 Diprotodontia ANCESTRAL SPECIES 51 ENSGT00730000111571 ENSGT00940000162197 ENSGT01030000235263.a ENSGT00390000004859 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00450000040324.a ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000156079 #28 ENSGT00940000154143.f.d Diprotodontia_a ANCESTRAL SPECIES 48 ENSGT00730000111571 ENSGT00940000162197 ENSGT01030000235263.a ENSGT00390000004859 ENSGT00940000162277 #9 ENSGT00390000003914 #10 ENSGT00940000163743 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00450000040324.a ENSGT00940000160938 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000156079 #28 ENSGT00940000154143.f.d Common wonbat DUPLICATION Common wonbat DUPLICATION Common wonbat MODERN SPECIES 307 ENSVURG00010018512 LYNX1 (ENSVURG00010018518) LYPD2 (ENSVURG00010018521) THEM6 (ENSVURG00010018524) ENSVURG00010018528 ARC (ENSVURG00010018531) #10 ADGRB1 (ENSVURG00010018560) #11 ENSVURG00010018798 ENSVURG00010018807 PTP4A3 (ENSVURG00010018814) #14 GPR20 (ENSVURG00010018852) #15 SLC45A4 (ENSVURG00010018857) #16 DENND3 (ENSVURG00010018871) #20 ENSVURG00010018898 #22 ENSVURG00010018902 #22 ENSVURG00010018910 #22 AGO2 (ENSVURG00010018916) #23 CHRAC1 (ENSVURG00010018927) #24 TRAPPC9 (ENSVURG00010018932) #25 ENSVURG00010018939 ENSVURG00010018941 KCNK9 (ENSVURG00010018946) #26 ENSVURG00010018961 #28 ENSVURG00010018966 #28 ENSVURG00010018974 ENSVURG00010018978 Common wonbat MODERN SPECIES 307 ENSVURG00010018368 ENSVURG00010018503 ENSVURG00010018512 LYNX1 (ENSVURG00010018518) LYPD2 (ENSVURG00010018521) THEM6 (ENSVURG00010018524) ENSVURG00010018528 ARC (ENSVURG00010018531) #10 ADGRB1 (ENSVURG00010018560) #11 ENSVURG00010018798 ENSVURG00010018807 PTP4A3 (ENSVURG00010018814) #14 GPR20 (ENSVURG00010018852) #15 SLC45A4 (ENSVURG00010018857) #16 DENND3 (ENSVURG00010018871) #20 ENSVURG00010018898 #22 ENSVURG00010018902 #22 ENSVURG00010018910 #22 AGO2 (ENSVURG00010018916) #23 CHRAC1 (ENSVURG00010018927) #24 TRAPPC9 (ENSVURG00010018932) #25 ENSVURG00010018939 ENSVURG00010018941 KCNK9 (ENSVURG00010018946) #26 ENSVURG00010018961 #28 ENSVURG00010018966 #28 ENSVURG00010018974 ENSVURG00010018978 Common wonbat MODERN SPECIES 307 ENSVURG00010018503 ENSVURG00010018512 LYNX1 (ENSVURG00010018518) LYPD2 (ENSVURG00010018521) THEM6 (ENSVURG00010018524) ENSVURG00010018528 ARC (ENSVURG00010018531) #10 ADGRB1 (ENSVURG00010018560) #11 ENSVURG00010018798 ENSVURG00010018807 PTP4A3 (ENSVURG00010018814) #14 GPR20 (ENSVURG00010018852) #15 SLC45A4 (ENSVURG00010018857) #16 DENND3 (ENSVURG00010018871) #20 ENSVURG00010018898 #22 ENSVURG00010018902 #22 ENSVURG00010018910 #22 AGO2 (ENSVURG00010018916) #23 CHRAC1 (ENSVURG00010018927) #24 TRAPPC9 (ENSVURG00010018932) #25 ENSVURG00010018939 ENSVURG00010018941 KCNK9 (ENSVURG00010018946) #26 ENSVURG00010018961 #28 ENSVURG00010018966 #28 ENSVURG00010018974 ENSVURG00010018978 koala MODERN SPECIES 170 SLC45A4 (ENSPCIG00000000685) #16 DENND3 (ENSPCIG00000027056) #20 PTK2 (ENSPCIG00000026517) #22 AGO2 (ENSPCIG00000026513) #23 CHRAC1 (ENSPCIG00000026511) #24 TRAPPC9 (ENSPCIG00000026318) #25 KCNK9 (ENSPCIG00000006474) #26 FAM135B (ENSPCIG00000011634) #28 Wallaby MODERN SPECIES 7785 ENSMEUG00000003208 #22 Tasmanian devil MODERN SPECIES ENSSHAG00000017767 ENSSHAG00000031009 JRK (ENSSHAG00000027142) #9 ENSSHAG00000031776 ARC (ENSSHAG00000025802) #10 ENSSHAG00000017159 ADGRB1 (ENSSHAG00000016588) #11 ENSSHAG00000025089 ENSSHAG00000010892 ENSSHAG00000002205 ENSSHAG00000016640 PTP4A3 (ENSSHAG00000022131) #14 GPR20 (ENSSHAG00000020490) #15 SLC45A4 (ENSSHAG00000014716) #16 DENND3 (ENSSHAG00000014190) #20 PTK2 (ENSSHAG00000011092) #22 AGO2 (ENSSHAG00000009593) #23 ENSSHAG00000025232 ENSSHAG00000005176 #25 ENSSHAG00000025364 #26 ENSSHAG00000024591 ENSSHAG00000002738 ENSSHAG00000018716 #28 ENSSHAG00000029089 ENSSHAG00000000383 ENSSHAG00000032083 #36 ZFAT (ENSSHAG00000018373) #37 ST3GAL1 (ENSSHAG00000029982) NDRG1 (ENSSHAG00000024700) CCN4 (ENSSHAG00000015115) SLA (ENSSHAG00000021012) Opossum DUPLICATION Opossum MODERN SPECIES 2 ENSMODG00000039273 ENSMODG00000024365 THEM6 (ENSMODG00000000042) JRK (ENSMODG00000024367) #9 ARC (ENSMODG00000000033) #10 ENSMODG00000000048 ADGRB1 (ENSMODG00000000556) #11 ENSMODG00000029552 #12 ENSMODG00000049316 ENSMODG00000000627 PTP4A3 (ENSMODG00000000651) #14 GPR20 (ENSMODG00000024396) #15 ENSMODG00000024398 SLC45A4 (ENSMODG00000000663) #16 ENSMODG00000042019 #20 ENSMODG00000049323 #22 ENSMODG00000038709 ENSMODG00000000707 #22 AGO2 (ENSMODG00000000748) #23 CHRAC1 (ENSMODG00000044477) #24 TRAPPC9 (ENSMODG00000024422) #25 ENSMODG00000024423 KCNK9 (ENSMODG00000000764) #26 ENSMODG00000000768 FAM135B (ENSMODG00000000885) #28 ENSMODG00000000893 ENSMODG00000048341 ENSMODG00000040118 ENSMODG00000041754 KHDRBS3 (ENSMODG00000000975) #36 ENSMODG00000001054 Opossum MODERN SPECIES 2 THEM6 (ENSMODG00000000042) JRK (ENSMODG00000024367) #9 ARC (ENSMODG00000000033) #10 ENSMODG00000000048 ADGRB1 (ENSMODG00000000556) #11 ENSMODG00000029552 #12 ENSMODG00000049316 ENSMODG00000000627 PTP4A3 (ENSMODG00000000651) #14 GPR20 (ENSMODG00000024396) #15 ENSMODG00000024398 SLC45A4 (ENSMODG00000000663) #16 ENSMODG00000042019 #20 ENSMODG00000049323 #22 ENSMODG00000038709 ENSMODG00000000707 #22 AGO2 (ENSMODG00000000748) #23 CHRAC1 (ENSMODG00000044477) #24 TRAPPC9 (ENSMODG00000024422) #25 ENSMODG00000024423 KCNK9 (ENSMODG00000000764) #26 ENSMODG00000000768 FAM135B (ENSMODG00000000885) #28 ENSMODG00000000893 ENSMODG00000048341 ENSMODG00000040118 ENSMODG00000041754 KHDRBS3 (ENSMODG00000000975) #36 ENSMODG00000001054 ZFAT (ENSMODG00000001068) #37 ENSMODG00000047814 Platypus MODERN SPECIES 15 ENSOANG00000006709 PTP4A3 (ENSOANG00000029465) #14 GPR20 (ENSOANG00000009762) #15 SLC45A4 (ENSOANG00000009761) #16 DENND3 (ENSOANG00000007128) #20 PTK2 (ENSOANG00000007126) #22 AGO2 (ENSOANG00000007125) #23 ENSOANG00000041698 #24 TRAPPC9 (ENSOANG00000007122) #25 KCNK9 (ENSOANG00000007121) #26 FAM135B (ENSOANG00000014070) #28 KHDRBS3 (ENSOANG00000014074) #36 LYPD2 (ENSOANG00000014075) ENSOANG00000014076 ENSOANG00000042432 #8 RPLP1 (ENSOANG00000037964) ENSOANG00000037081 ARC (ENSOANG00000014077) #10 ENSOANG00000014078 ADGRB1 (ENSOANG00000014079) #11 ENSOANG00000020239 #12 Sauria ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT00390000004859.i ENSGT00940000153378.a.a ##8 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Lepidosauria ANCESTRAL SPECIES 2 ENSGT00940000153378.b.a.a.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT00390000004859.i ENSGT00940000153378.a.a ##8 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000177637 ENSGT00940000156215 ENSGT00390000011144 tuatara DUPLICATION tuatara DUPLICATION tuatara MODERN SPECIES 1282 ENSSPUG00000006125 LYPD2 (ENSSPUG00000006133) ARC (ENSSPUG00000006157) #10 ADGRB1 (ENSSPUG00000006166) #11 ENSSPUG00000006206 TSNARE1 (ENSSPUG00000006223) #12 PTP4A3 (ENSSPUG00000006297) #14 ENSSPUG00000006342 GPR20 (ENSSPUG00000006445) #15 ENSSPUG00000006481 #20 ENSSPUG00000006488 #20 ENSSPUG00000006498 #20 ENSSPUG00000006505 #20 ENSSPUG00000006515 #22 ENSSPUG00000006531 #22 ENSSPUG00000006566 #22 RPLP1 (ENSSPUG00000006575) AGO2 (ENSSPUG00000006608) #23 CHRAC1 (ENSSPUG00000006637) #24 TRAPPC9 (ENSSPUG00000006667) #25 KCNK9 (ENSSPUG00000006785) #26 tuatara MODERN SPECIES 1282 LY6E (ENSSPUG00000006104) ##8 ENSSPUG00000006118 ENSSPUG00000006125 LYPD2 (ENSSPUG00000006133) ARC (ENSSPUG00000006157) #10 ADGRB1 (ENSSPUG00000006166) #11 ENSSPUG00000006206 TSNARE1 (ENSSPUG00000006223) #12 PTP4A3 (ENSSPUG00000006297) #14 ENSSPUG00000006342 GPR20 (ENSSPUG00000006445) #15 ENSSPUG00000006481 #20 ENSSPUG00000006488 #20 ENSSPUG00000006498 #20 ENSSPUG00000006505 #20 ENSSPUG00000006515 #22 ENSSPUG00000006531 #22 ENSSPUG00000006566 #22 RPLP1 (ENSSPUG00000006575) AGO2 (ENSSPUG00000006608) #23 CHRAC1 (ENSSPUG00000006637) #24 TRAPPC9 (ENSSPUG00000006667) #25 KCNK9 (ENSSPUG00000006785) #26 tuatara MODERN SPECIES 1282 ENSSPUG00000006118 ENSSPUG00000006125 LYPD2 (ENSSPUG00000006133) ARC (ENSSPUG00000006157) #10 ADGRB1 (ENSSPUG00000006166) #11 ENSSPUG00000006206 TSNARE1 (ENSSPUG00000006223) #12 PTP4A3 (ENSSPUG00000006297) #14 ENSSPUG00000006342 GPR20 (ENSSPUG00000006445) #15 ENSSPUG00000006481 #20 ENSSPUG00000006488 #20 ENSSPUG00000006498 #20 ENSSPUG00000006505 #20 ENSSPUG00000006515 #22 ENSSPUG00000006531 #22 ENSSPUG00000006566 #22 RPLP1 (ENSSPUG00000006575) AGO2 (ENSSPUG00000006608) #23 CHRAC1 (ENSSPUG00000006637) #24 TRAPPC9 (ENSSPUG00000006667) #25 KCNK9 (ENSSPUG00000006785) #26 Episquamata ANCESTRAL SPECIES 1 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT00390000004859.i ENSGT00940000153378.a.a ##8 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00910000144338 ENSGT00960000190025 ENSGT00940000156079.q #28 ENSGT00940000156079.r #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 Laterata ANCESTRAL SPECIES 5 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT01030000235263 ENSGT00940000153378.a.a ##8 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00910000144338 ENSGT00960000190025 ENSGT00940000156079.q #28 ENSGT00940000156079.r #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 Common wall lizard MODERN SPECIES 15 THEM6 (ENSPMRG00000005690) ENSPMRG00000005697 ENSPMRG00000005706 ##8 PSCA (ENSPMRG00000005711) #8 ARC (ENSPMRG00000005718) #10 ENSPMRG00000005723 ADGRB1 (ENSPMRG00000005731) #11 ENSPMRG00000005753 TSNARE1 (ENSPMRG00000005772) #12 ENSPMRG00000005802 ENSPMRG00000005806 PTP4A3 (ENSPMRG00000005814) #14 GPR20 (ENSPMRG00000005822) #15 SLC45A4 (ENSPMRG00000005828) #16 DENND3 (ENSPMRG00000005841) #20 PTK2 (ENSPMRG00000005866) #22 RPLP1 (ENSPMRG00000005922) AGO2 (ENSPMRG00000006138) #23 CHRAC1 (ENSPMRG00000006780) #24 TRAPPC9 (ENSPMRG00000006837) #25 ENSPMRG00000007004 #26 KCNK9 (ENSPMRG00000007010) #26 ENSPMRG00000007018 ENSPMRG00000007028 ENSPMRG00000007037 ENSPMRG00000007043 ENSPMRG00000007047 ENSPMRG00000007051 ENSPMRG00000007057 ENSPMRG00000007063 ENSPMRG00000007068 Argentine black and white tegu MODERN SPECIES 13 ENSSMRG00000008144 ##8 ENSSMRG00000008140 ##8 ENSSMRG00000008134 LYPD2 (ENSSMRG00000008128) ENSSMRG00000008125 ENSSMRG00000008123 ENSSMRG00000008106 ARC (ENSSMRG00000008099) #10 ADGRB1 (ENSSMRG00000008078) #11 ENSSMRG00000008023 TSNARE1 (ENSSMRG00000007976) #12 ENSSMRG00000007961 #14 GPR20 (ENSSMRG00000007950) #15 SLC45A4 (ENSSMRG00000007941) #16 DENND3 (ENSSMRG00000007932) #20 PTK2 (ENSSMRG00000007865) #22 RPLP1 (ENSSMRG00000007764) AGO2 (ENSSMRG00000007763) #23 CHRAC1 (ENSSMRG00000007762) #24 TRAPPC9 (ENSSMRG00000006918) #25 KCNK9 (ENSSMRG00000006889) #26 CATSPER2 (ENSSMRG00000006879) ENSSMRG00000006873 ENSSMRG00000006867 ENSSMRG00000006864 ENSSMRG00000006857 ENSSMRG00000006850 ENSSMRG00000006844 ENSSMRG00000006843 ENSSMRG00000006833 ENSSMRG00000006828 Toxicofera ANCESTRAL SPECIES 8 ENSGT01010000227788 ENSGT00990000205443 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT00390000004859.i ENSGT00940000153378.a.a ##8 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00910000144338 ENSGT00940000163557.C ENSGT00940000156079.q #28 ENSGT00940000156079.r #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 Lizard MODERN SPECIES 3 RRM2B (ENSACAG00000008913) NCALD (ENSACAG00000042404) ENSACAG00000038144 ENSACAG00000043335 ENSACAG00000008759 ENSACAG00000036322 ENSACAG00000036602 ZNF706 (ENSACAG00000008753) YWHAZ (ENSACAG00000040316) ENSACAG00000039635 ENSACAG00000028249 ENSACAG00000000749 #14 GPR20 (ENSACAG00000000748) #15 SLC45A4 (ENSACAG00000000653) #16 DENND3 (ENSACAG00000000549) #20 PTK2 (ENSACAG00000000203) #22 ENSACAG00000000197 AGO2 (ENSACAG00000000167) #23 CHRAC1 (ENSACAG00000000166) #24 TRAPPC9 (ENSACAG00000000144) #25 ENSACAG00000041405 KCNK9 (ENSACAG00000000140) #26 ENSACAG00000000139 ENSACAG00000041194 ENSACAG00000040597 ENSACAG00000027706 ENSACAG00000024154 ENSACAG00000020938 ENSACAG00000045179 ENSACAG00000035367 ENSACAG00000022451 Elapidae ANCESTRAL SPECIES 32 ENSGT00940000153378.b.a.a.b ##8 ENSGT01010000227788 ENSGT00990000205443 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT00390000004859.j ENSGT00390000004859.i ENSGT01030000237813 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00910000144338 Indian cobra MODERN SPECIES 2 ENSNNAG00000009146 ENSNNAG00000009134 ##8 ENSNNAG00000009111 ENSNNAG00000009101 THEM6 (ENSNNAG00000009092) ENSNNAG00000009081 ENSNNAG00000009048 ARC (ENSNNAG00000009036) #10 ADGRB1 (ENSNNAG00000008806) #11 TSNARE1 (ENSNNAG00000008754) #12 ENSNNAG00000008731 ENSNNAG00000008719 ENSNNAG00000008699 PTP4A3 (ENSNNAG00000008666) #14 DENND3 (ENSNNAG00000008602) #20 PTK2 (ENSNNAG00000008291) #22 RPLP1 (ENSNNAG00000008238) AGO2 (ENSNNAG00000008166) #23 CHRAC1 (ENSNNAG00000008151) #24 TRAPPC9 (ENSNNAG00000007932) #25 KCNK9 (ENSNNAG00000007909) #26 CATSPER2 (ENSNNAG00000007890) ENSNNAG00000007870 ENSNNAG00000007846 ENSNNAG00000007818 ENSNNAG00000007795 ENSNNAG00000007748 ENSNNAG00000007720 ENSNNAG00000007702 ENSNNAG00000007637 ENSNNAG00000007599 Elapidae_a DUPLICATION Elapidae_a DUPLICATION Elapidae_a ANCESTRAL SPECIES 103 ENSGT00990000205443.a ENSGT00940000153378.b.a.b ##8 ENSGT01030000235263 ENSGT00390000004859.j ENSGT00390000004859.i ENSGT00940000162197 ENSGT01030000237813 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a.xb #22 ENSGT00940000155113.a.a.wb.a #22 ENSGT00550000074698.j.a ENSGT00940000155239.l #23 ENSGT00940000166127 ENSGT00940000155239.k #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000155113.a.a.wb.a #22 Mainland tiger snake MODERN SPECIES 2380 ENSNSUG00000000542 #22 Blue-lipped sea krait MODERN SPECIES 2638 ENSLLTG00000000838 #22 ENSLLTG00000000847 ENSLLTG00000000921 #23 Elapidae_a ANCESTRAL SPECIES ENSGT00940000155113.a.a.wb.b #22 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000155113.a.a.wb.b #22 Mainland tiger snake MODERN SPECIES 2919 ENSNSUG00000000528 #22 Elapidae_a ANCESTRAL SPECIES 103 ENSGT01010000227788 ENSGT00990000205443.a ENSGT00940000153378.b.a.b ##8 ENSGT01030000235263 ENSGT00390000004859.j ENSGT00390000004859.i ENSGT00940000162197 ENSGT01030000237813 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a.xb #22 ENSGT00940000155113.a.a.wb.a #22 ENSGT00550000074698.j.a ENSGT00940000155239.l #23 ENSGT00940000166127 ENSGT00940000155239.k #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 Blue-lipped sea krait MODERN SPECIES 3004 PTK2 (ENSLLTG00000009486) #22 Acanthophiinae ANCESTRAL SPECIES 104 ENSGT00940000153378.b.a.a.b ##8 ENSGT01010000227788 ENSGT00990000205443.a ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT00390000004859.j ENSGT00390000004859.i ENSGT01030000237813 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a.xb #22 ENSGT00940000155239.k #23 ENSGT00550000074698.j.a ENSGT00940000155239.l #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 Mainland tiger snake MODERN SPECIES 205 SLC45A4 (ENSNSUG00000017032) #16 DENND3 (ENSNSUG00000017033) #20 PTK2 (ENSNSUG00000017034) #22 AGO2 (ENSNSUG00000017954) #23 CHRAC1 (ENSNSUG00000017956) #24 TRAPPC9 (ENSNSUG00000017957) #25 KCNK9 (ENSNSUG00000017958) #26 ENSNSUG00000017959 Eastern brown snake MODERN SPECIES 81 ENSPTXG00000018601 ENSPTXG00000018600 ENSPTXG00000018599 ##8 LYPD2 (ENSPTXG00000018598) ENSPTXG00000018597 THEM6 (ENSPTXG00000018596) ENSPTXG00000018595 ENSPTXG00000018594 ARC (ENSPTXG00000018593) #10 ADGRB1 (ENSPTXG00000018592) #11 TSNARE1 (ENSPTXG00000018591) #12 PTP4A3 (ENSPTXG00000018590) #14 GPR20 (ENSPTXG00000018589) #15 SLC45A4 (ENSPTXG00000018588) #16 DENND3 (ENSPTXG00000018587) #20 PTK2 (ENSPTXG00000015722) #22 RPLP1 (ENSPTXG00000015712) AGO2 (ENSPTXG00000015330) #23 CHRAC1 (ENSPTXG00000015311) #24 TRAPPC9 (ENSPTXG00000015308) #25 ENSPTXG00000015307 #26 KCNK9 (ENSPTXG00000015306) #26 ENSPTXG00000015304 Archelosauria ANCESTRAL SPECIES 5 ENSGT00940000153378.b.a.a.b.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT00390000004859.i ENSGT00940000153378.a.a ##8 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Archosauria ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.a ##8 ENSGT00940000153378.b.a.a.b.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT01030000235263 ENSGT01030000239707 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 Australian saltwater crocodile MODERN SPECIES ENSCPRG00005013687 ##8 ENSCPRG00005013686 ##8 LYPD2 (ENSCPRG00005013683) ENSCPRG00005013680 ENSCPRG00005013678 ARC (ENSCPRG00005013663) #10 ENSCPRG00005013651 ADGRB1 (ENSCPRG00005013599) #11 ENSCPRG00005013580 TSNARE1 (ENSCPRG00005013571) #12 PTP4A3 (ENSCPRG00005013540) #14 ENSCPRG00005013526 GPR20 (ENSCPRG00005013511) #15 SLC45A4 (ENSCPRG00005013508) #16 DENND3 (ENSCPRG00005013464) #20 PTK2 (ENSCPRG00005012596) #22 RPLP1 (ENSCPRG00005012385) AGO2 (ENSCPRG00005012306) #23 CHRAC1 (ENSCPRG00005012301) #24 TRAPPC9 (ENSCPRG00005012204) #25 KCNK9 (ENSCPRG00005012110) #26 ENSCPRG00005012044 #27 ENSCPRG00005012012 ENSCPRG00005011978 #28 ENSCPRG00005011945 #28 KHDRBS3 (ENSCPRG00005011881) #36 ZFAT (ENSCPRG00005011739) #37 ST3GAL1 (ENSCPRG00005011684) NDRG1 (ENSCPRG00005011585) CCN4 (ENSCPRG00005011570) SLA (ENSCPRG00005011507) Aves ANCESTRAL SPECIES 9 ENSGT00940000153378.b.a.a.b.a ##8 ENSGT00940000153378.b.a.a.a ##8 ENSGT00940000153378.b.a.a.b.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT01030000235263 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 African ostrich MODERN SPECIES 927 ZC3H12C (ENSSCUG00000017156) RDX (ENSSCUG00000017153) FDX1 (ENSSCUG00000017152) ARHGAP20 (ENSSCUG00000017151) RNF17 (ENSSCUG00000017147) CENPJ (ENSSCUG00000017145) PARP4 (ENSSCUG00000017144) MPHOSPH8 (ENSSCUG00000017142) TSNARE1 (ENSSCUG00000017136) #12 PTP4A3 (ENSSCUG00000017130) #14 ENSSCUG00000017129 GPR20 (ENSSCUG00000017128) #15 SLC45A4 (ENSSCUG00000017124) #16 ENSSCUG00000017122 DENND3 (ENSSCUG00000017116) #20 PTK2 (ENSSCUG00000017108) #22 AGO2 (ENSSCUG00000017100) #23 CHRAC1 (ENSSCUG00000017099) #24 TRAPPC9 (ENSSCUG00000017096) #25 Neognathae ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b.a ##8 ENSGT00940000153378.b.a.a.a ##8 ENSGT00940000153378.b.a.a.b.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT01030000235263 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000163916 ENSGT00940000163557.C ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 Galloanserae ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b.a ##8 ENSGT00940000153378.b.a.a.a ##8 ENSGT00940000153378.b.a.a.b.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT01030000235263 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215 Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000162943 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##8 ENSGT00940000153378.b.a.a.a ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000153378.a.a ##8 ENSGT01030000235263 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C.d #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280.b #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215 Japanese quail MODERN SPECIES 11 TOP1MT (ENSCJPG00005010481) ENSCJPG00005010480 ENSCJPG00005010479 ##8 ENSCJPG00005010478 ##8 ENSCJPG00005010477 ##8 ENSCJPG00005010476 ##8 ENSCJPG00005010475 PSCA (ENSCJPG00005010474) #8 ARC (ENSCJPG00005010469) #10 ADGRB1 (ENSCJPG00005010467) #11 TSNARE1 (ENSCJPG00005010465) #12 PTP4A3 (ENSCJPG00005010458) #14 GPR20 (ENSCJPG00005010454) #15 SLC45A4 (ENSCJPG00005010453) #16 DENND3 (ENSCJPG00005010452) #20 PTK2 (ENSCJPG00005010449) #22 RPLP1 (ENSCJPG00005010448) AGO2 (ENSCJPG00005010107) #23 CHRAC1 (ENSCJPG00005010104) #24 TRAPPC9 (ENSCJPG00005010103) #25 KCNK9 (ENSCJPG00005010102) #26 ENSCJPG00005010100 ENSCJPG00005010099 FAM135B (ENSCJPG00005010097) #28 KHDRBS3 (ENSCJPG00005010094) #36 ZFAT (ENSCJPG00005010092) #37 ST3GAL1 (ENSCJPG00005010090) NDRG1 (ENSCJPG00005010088) CCN4 (ENSCJPG00005010087) SLA (ENSCJPG00005010086) TG (ENSCJPG00005008340) Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##8 ENSGT00940000153378.b.a.a.a ##8 ENSGT01030000236209 ENSGT00940000153378.b.a.b ##8 ENSGT00940000153378.a.a ##8 ENSGT01030000235263 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C.d #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00940000168748 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000156079 #28 ENSGT00940000157280.b #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215 ENSGT00390000011144 Chicken MODERN SPECIES 11 TOP1MT (ENSGALG00010008081) ENSGALG00010008053 ENSGALG00010008048 ##8 LY6CLEL (ENSGALG00010008037) LY6E (ENSGALG00010008029) ##8 ENSGALG00010007947 ##8 ENSGALG00010007958 PSCA (ENSGALG00010007954) #8 ARC (ENSGALG00010007950) #10 ADGRB1 (ENSGALG00010008211) #11 TSNARE1 (ENSGALG00010008190) #12 PTP4A3 (ENSGALG00010009335) #14 GPR20 (ENSGALG00010009320) #15 SLC45A4 (ENSGALG00010009253) #16 DENND3 (ENSGALG00010009237) #20 PTK2 (ENSGALG00010009159) #22 RPLP1 (ENSGALG00010009113) AGO2 (ENSGALG00010009068) #23 ENSGALG00010009035 TRAPPC9 (ENSGALG00010008999) #25 KCNK9 (ENSGALG00010008973) #26 COL22A1 (ENSGALG00010008946) ENSGALG00010008894 FAM135B (ENSGALG00010008884) #28 KHDRBS3 (ENSGALG00010008852) #36 ZFAT (ENSGALG00010009345) #37 ST3GAL1 (ENSGALG00010009777) NDRG1 (ENSGALG00010009749) WISP1 (ENSGALG00010009736) SLA (ENSGALG00010008176) TG (ENSGALG00010008164) Turkey DUPLICATION Turkey MODERN SPECIES 22 ENSMGAG00000012862 ENSMGAG00000022370 ENSMGAG00000012876 ENSMGAG00000018719 #37 ENSMGAG00000012883 #37 ENSMGAG00000022843 #36 ENSMGAG00000012888 #36 ENSMGAG00000012896 #28 ENSMGAG00000020709 ENSMGAG00000012923 #26 ENSMGAG00000018714 #26 ENSMGAG00000012927 #25 ENSMGAG00000012936 #24 ENSMGAG00000012952 #22 ENSMGAG00000012951 ENSMGAG00000020023 #22 ENSMGAG00000022269 ##22 ENSMGAG00000012942 #23 ENSMGAG00000019028 #20 ENSMGAG00000012966 #20 ENSMGAG00000012969 #16 ENSMGAG00000015881 #15 ENSMGAG00000012972 #14 ENSMGAG00000018853 ENSMGAG00000012979 ENSMGAG00000012984 #10 ENSMGAG00000021273 ENSMGAG00000012987 #8 ENSMGAG00000020757 ##8 ENSMGAG00000012990 ##8 ENSMGAG00000012991 Turkey MODERN SPECIES 22 ENSMGAG00000012853 ENSMGAG00000012860 ENSMGAG00000012862 ENSMGAG00000022370 ENSMGAG00000012876 ENSMGAG00000018719 #37 ENSMGAG00000012883 #37 ENSMGAG00000022843 #36 ENSMGAG00000012888 #36 ENSMGAG00000012896 #28 ENSMGAG00000020709 ENSMGAG00000012923 #26 ENSMGAG00000018714 #26 ENSMGAG00000012927 #25 ENSMGAG00000012936 #24 ENSMGAG00000012952 #22 ENSMGAG00000012951 ENSMGAG00000020023 #22 ENSMGAG00000022269 ##22 ENSMGAG00000012942 #23 ENSMGAG00000019028 #20 ENSMGAG00000012966 #20 ENSMGAG00000012969 #16 ENSMGAG00000015881 #15 ENSMGAG00000012972 #14 ENSMGAG00000018853 ENSMGAG00000012979 ENSMGAG00000012984 #10 ENSMGAG00000021273 ENSMGAG00000012987 #8 ENSMGAG00000020757 ##8 Anatidae ANCESTRAL SPECIES 3 ENSGT00940000153378.b.a.a.b.a ##8 ENSGT00940000153378.b.a.a.a ##8 ENSGT00940000153378.b.a.a.b.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT01030000235263 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C.f #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163916 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215 Pink-footed goose MODERN SPECIES 37 ENSABRG00000009052 #20 PTK2 (ENSABRG00000009190) #22 RPLP1 (ENSABRG00000009791) AGO2 (ENSABRG00000009885) #23 CHRAC1 (ENSABRG00000010680) #24 TRAPPC9 (ENSABRG00000010691) #25 KCNK9 (ENSABRG00000010752) #26 ENSABRG00000010840 FAM135B (ENSABRG00000010869) #28 ENSABRG00000000837 KHDRBS3 (ENSABRG00000000861) #36 ZFAT (ENSABRG00000001043) #37 ENSABRG00000001218 ST3GAL1 (ENSABRG00000001315) NDRG1 (ENSABRG00000001330) CCN4 (ENSABRG00000001358) TG (ENSABRG00000001382) Duck DUPLICATION Duck MODERN SPECIES 87 ENSAPLG00000017872 #22 Duck MODERN SPECIES 10 ENSAPLG00000010200 ##8 ENSAPLG00000018242 ##8 ENSAPLG00000010175 ##8 ENSAPLG00000010171 ##8 LYPD2 (ENSAPLG00000029723) ENSAPLG00000029154 PSCA (ENSAPLG00000029276) #8 ARC (ENSAPLG00000001892) #10 ADGRB1 (ENSAPLG00000009536) #11 ENSAPLG00000028784 TSNARE1 (ENSAPLG00000005699) #12 ENSAPLG00000001675 GPR20 (ENSAPLG00000023130) #15 SLC45A4 (ENSAPLG00000014236) #16 ENSAPLG00000027705 #20 ENSAPLG00000011901 #22 RPLP1 (ENSAPLG00000023830) AGO2 (ENSAPLG00000010465) #23 CHRAC1 (ENSAPLG00000030772) #24 TRAPPC9 (ENSAPLG00000010275) #25 KCNK9 (ENSAPLG00000000939) #26 ENSAPLG00000001716 FAM135B (ENSAPLG00000010289) #28 KHDRBS3 (ENSAPLG00000014746) #36 ENSAPLG00000021102 ZFAT (ENSAPLG00000014922) #37 ST3GAL1 (ENSAPLG00000018128) NDRG1 (ENSAPLG00000015644) CCN4 (ENSAPLG00000002582) ENSAPLG00000025021 SLA (ENSAPLG00000003422) Neognathae_b ANCESTRAL SPECIES 3 ENSGT00940000153378.b.a.a.b.a ##8 ENSGT00940000153378.b.a.a.a ##8 ENSGT00940000153378.b.a.a.b.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT01030000235263 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000164558 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 Passeriformes ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b.a ##8 ENSGT00940000153378.b.a.a.a ##8 ENSGT00940000153378.b.a.a.b.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000153378.a.a ##8 ENSGT01030000235263 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 Great tit MODERN SPECIES 11 TOP1MT (ENSPMJG00000013178) ENSPMJG00000013177 ##8 ENSPMJG00000013175 ##8 ENSPMJG00000013172 ##8 ENSPMJG00000013171 ##8 ENSPMJG00000013169 ##8 ENSPMJG00000013167 PSCA (ENSPMJG00000013164) #8 ARC (ENSPMJG00000013161) #10 ADGRB1 (ENSPMJG00000013148) #11 TSNARE1 (ENSPMJG00000013139) #12 PTP4A3 (ENSPMJG00000013132) #14 GPR20 (ENSPMJG00000013131) #15 SLC45A4 (ENSPMJG00000013130) #16 DENND3 (ENSPMJG00000013125) #20 PTK2 (ENSPMJG00000011788) #22 RPLP1 (ENSPMJG00000011787) AGO2 (ENSPMJG00000011786) #23 CHRAC1 (ENSPMJG00000011785) #24 TRAPPC9 (ENSPMJG00000011784) #25 KCNK9 (ENSPMJG00000011783) #26 ENSPMJG00000011782 ENSPMJG00000011781 FAM135B (ENSPMJG00000011780) #28 KHDRBS3 (ENSPMJG00000011775) #36 ZFAT (ENSPMJG00000011770) #37 ST3GAL1 (ENSPMJG00000011765) NDRG1 (ENSPMJG00000011763) CCN4 (ENSPMJG00000011762) SLA (ENSPMJG00000011761) TG (ENSPMJG00000011760) Passeriformes_d ANCESTRAL SPECIES ENSGT00940000153378.b.a.a.b.a ##8 ENSGT00940000153378.b.a.a.a ##8 ENSGT00940000153378.b.a.a.b.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000153378.a.a ##8 ENSGT01030000235263 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01030000234973 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486.n #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000164558 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 Flycatcher MODERN SPECIES 11 ENSFALG00000009576 ##8 ENSFALG00000009581 ##8 ENSFALG00000027540 ##8 ENSFALG00000009599 ##8 ENSFALG00000009604 PSCA (ENSFALG00000009610) #8 ARC (ENSFALG00000015013) #10 ADGRB1 (ENSFALG00000009314) #11 ENSFALG00000029024 TSNARE1 (ENSFALG00000009283) #12 ENSFALG00000026711 ENSFALG00000000673 #14 GPR20 (ENSFALG00000014503) #15 SLC45A4 (ENSFALG00000008784) #16 DENND3 (ENSFALG00000008780) #20 PTK2 (ENSFALG00000002857) #22 ENSFALG00000026431 AGO2 (ENSFALG00000002838) #23 CHRAC1 (ENSFALG00000026593) #24 TRAPPC9 (ENSFALG00000002813) #25 ENSFALG00000002806 #25 KCNK9 (ENSFALG00000027029) #26 ENSFALG00000014428 FAM135B (ENSFALG00000002758) #28 KHDRBS3 (ENSFALG00000002752) #36 ZFAT (ENSFALG00000002744) #37 ST3GAL1 (ENSFALG00000023420) NDRG1 (ENSFALG00000002723) CCN4 (ENSFALG00000002718) SLA (ENSFALG00000023037) TG (ENSFALG00000002680) Passeriformes_g ANCESTRAL SPECIES 3 ENSGT00940000153378.b.a.a.b.a ##8 ENSGT00940000153378.b.a.a.a ##8 ENSGT00940000153378.b.a.a.b.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT00940000153378.a.a ##8 ENSGT01030000235263 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486.n #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000164558 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 Medium ground finch MODERN SPECIES 122 PTP4A3 (ENSGFOG00000006087) #14 GPR20 (ENSGFOG00000006091) #15 SLC45A4 (ENSGFOG00000006097) #16 DENND3 (ENSGFOG00000006118) #20 PTK2 (ENSGFOG00000006205) #22 AGO2 (ENSGFOG00000006341) #23 CHRAC1 (ENSGFOG00000006690) #24 TRAPPC9 (ENSGFOG00000006695) #25 ENSGFOG00000006710 #26 ENSGFOG00000006712 #26 Passeroidea ANCESTRAL SPECIES 2 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##8 ENSGT00940000153378.b.a.a.a ##8 ENSGT00940000153378.b.a.a.b.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000153378.a.a ##8 ENSGT01030000235263 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486.n #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000164558 ENSGT00940000163129 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 Zebra finch MODERN SPECIES 12 ENSTGUG00000018250 ENSTGUG00000012733 ##8 ENSTGUG00000012732 ##8 ENSTGUG00000028739 ENSTGUG00000022984 ##8 ENSTGUG00000021003 ##8 ENSTGUG00000012729 PSCA (ENSTGUG00000012728) #8 ARC (ENSTGUG00000012727) #10 ADGRB1 (ENSTGUG00000012707) #11 TSNARE1 (ENSTGUG00000012701) #12 PTP4A3 (ENSTGUG00000021872) #14 GPR20 (ENSTGUG00000012699) #15 SLC45A4 (ENSTGUG00000012694) #16 DENND3 (ENSTGUG00000012690) #20 PTK2 (ENSTGUG00000012663) #22 RPLP1 (ENSTGUG00000012661) AGO2 (ENSTGUG00000012652) #23 CHRAC1 (ENSTGUG00000012651) #24 TRAPPC9 (ENSTGUG00000012639) #25 KCNK9 (ENSTGUG00000028788) #26 ENSTGUG00000029365 ENSTGUG00000012624 FAM135B (ENSTGUG00000012621) #28 KHDRBS3 (ENSTGUG00000012611) #36 ZFAT (ENSTGUG00000012603) #37 ST3GAL1 (ENSTGUG00000012594) NDRG1 (ENSTGUG00000012576) CCN4 (ENSTGUG00000012573) SLA (ENSTGUG00000012567) TG (ENSTGUG00000012562) Common canary DUPLICATION Common canary MODERN SPECIES 794 ENSSCAG00000002279 #22 Common canary MODERN SPECIES ARC (ENSSCAG00000009135) #10 ADGRB1 (ENSSCAG00000009035) #11 TSNARE1 (ENSSCAG00000008951) #12 PTP4A3 (ENSSCAG00000008906) #14 GPR20 (ENSSCAG00000008884) #15 SLC45A4 (ENSSCAG00000008873) #16 DENND3 (ENSSCAG00000008864) #20 ENSSCAG00000008819 #22 RPLP1 (ENSSCAG00000008813) AGO2 (ENSSCAG00000008805) #23 CHRAC1 (ENSSCAG00000008786) #24 TRAPPC9 (ENSSCAG00000008702) #25 KCNK9 (ENSSCAG00000008607) #26 ENSSCAG00000008586 #27 ENSSCAG00000008564 FAM135B (ENSSCAG00000008555) #28 ENSSCAG00000008508 KHDRBS3 (ENSSCAG00000008494) #36 ZFAT (ENSSCAG00000008486) #37 ST3GAL1 (ENSSCAG00000008475) NDRG1 (ENSSCAG00000008471) CCN4 (ENSSCAG00000008468) SLA (ENSSCAG00000008460) Neognathae_c ANCESTRAL SPECIES 1 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##8 ENSGT00940000153378.b.a.a.a ##8 ENSGT00940000153378.b.a.a.b.b ##8 ENSGT00940000153378.b.a.b ##8 ENSGT00940000162197 ENSGT01030000235263 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163557.C ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159300 ENSGT00940000159104 Kakapo MODERN SPECIES ENSSHBG00005001196 ##8 ENSSHBG00005001197 ##8 ENSSHBG00005001198 ENSSHBG00005001199 ##8 LYPD2 (ENSSHBG00005001200) ENSSHBG00005001201 ENSSHBG00005001202 ARC (ENSSHBG00005001203) #10 ADGRB1 (ENSSHBG00005001204) #11 TSNARE1 (ENSSHBG00005001205) #12 PTP4A3 (ENSSHBG00005001206) #14 GPR20 (ENSSHBG00005001207) #15 SLC45A4 (ENSSHBG00005001208) #16 ENSSHBG00005001209 #20 ENSSHBG00005001210 #20 PTK2 (ENSSHBG00005001211) #22 RPLP1 (ENSSHBG00005001212) AGO2 (ENSSHBG00005001213) #23 CHRAC1 (ENSSHBG00005001214) #24 TRAPPC9 (ENSSHBG00005001215) #25 KCNK9 (ENSSHBG00005001217) #26 ENSSHBG00005001220 ENSSHBG00005001221 FAM135B (ENSSHBG00005001222) #28 KHDRBS3 (ENSSHBG00005001223) #36 ZFAT (ENSSHBG00005001224) #37 ST3GAL1 (ENSSHBG00005001225) NDRG1 (ENSSHBG00005001226) CCN4 (ENSSHBG00005001227) ENSSHBG00005000662 SLA (ENSSHBG00005002333) Golden eagle MODERN SPECIES 20 ENSACCG00020004135 ENSACCG00020004138 ##8 ENSACCG00020004145 ##8 ENSACCG00020004152 ##8 ENSACCG00020004161 ##8 LYPD2 (ENSACCG00020004168) ENSACCG00020004179 PSCA (ENSACCG00020004190) #8 ARC (ENSACCG00020004195) #10 ADGRB1 (ENSACCG00020004228) #11 TSNARE1 (ENSACCG00020004263) #12 PTP4A3 (ENSACCG00020004274) #14 GPR20 (ENSACCG00020004283) #15 SLC45A4 (ENSACCG00020004289) #16 DENND3 (ENSACCG00020004301) #20 PTK2 (ENSACCG00020004371) #22 RPLP1 (ENSACCG00020004407) AGO2 (ENSACCG00020004419) #23 CHRAC1 (ENSACCG00020004433) #24 TRAPPC9 (ENSACCG00020004452) #25 KCNK9 (ENSACCG00020004478) #26 ENSACCG00020004497 ENSACCG00020004510 ENSACCG00020004527 #28 ENSACCG00020000347 #28 KHDRBS3 (ENSACCG00020000376) #36 ZFAT (ENSACCG00020000410) #37 ST3GAL1 (ENSACCG00020000439) NDRG1 (ENSACCG00020000456) CCN4 (ENSACCG00020000483) ENSACCG00020000530 Cryptodira ANCESTRAL SPECIES 22 ENSGT00940000164676 ENSGT00940000161068 ENSGT00940000162747 ENSGT00940000153837.a.a ENSGT00940000162943 ENSGT00940000153378.b.b ##8 ENSGT01030000239707 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698.g ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Chinese turtle MODERN SPECIES 1134 SLC45A4 (ENSPSIG00000014137) #16 DENND3 (ENSPSIG00000014485) #20 ENSPSIG00000000769 PTK2 (ENSPSIG00000003846) #22 RPLP1 (ENSPSIG00000004041) AGO2 (ENSPSIG00000004064) #23 CHRAC1 (ENSPSIG00000004183) #24 ENSPSIG00000000776 TRAPPC9 (ENSPSIG00000004195) #25 KCNK9 (ENSPSIG00000004215) #26 ENSPSIG00000000779 ENSPSIG00000004222 ENSPSIG00000000788 ENSPSIG00000004345 #28 ENSPSIG00000004351 #28 ENSPSIG00000000795 KHDRBS3 (ENSPSIG00000004366) #36 ZFAT (ENSPSIG00000004396) #37 ENSPSIG00000000801 Testudinoidea ANCESTRAL SPECIES 16 ENSGT00940000153378.b.a.a.a.a ##8 ENSGT00940000153378.b.a.a.a.b ##8 ENSGT00940000153378.b.a.b.a.a ##8 ENSGT00940000162197 ENSGT00390000004859.i ENSGT00940000153378.a.a ##8 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698.g ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Emydidae ANCESTRAL SPECIES 15 ENSGT00940000153378.b.a.a.a.b ##8 ENSGT00940000153378.b.a.a.b.b ##8 ENSGT00940000153378.b.a.b.a.a ##8 ENSGT00940000162197 ENSGT00390000004859.i ENSGT00940000153378.a.a ##8 ENSGT00940000153378.a.b #8 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698.g ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000159308 #27 ENSGT00940000164558 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 Three-toed box turtle MODERN SPECIES 24 ENSTMTG00000000377 ##8 ENSTMTG00000000346 ##8 LYPD2 (ENSTMTG00000000322) THEM6 (ENSTMTG00000000308) ENSTMTG00000000295 ##8 ENSTMTG00000000282 ENSTMTG00000000262 ARC (ENSTMTG00000000252) #10 ADGRB1 (ENSTMTG00000000135) #11 TSNARE1 (ENSTMTG00000020237) #12 PTP4A3 (ENSTMTG00000020227) #14 ENSTMTG00000020199 GPR20 (ENSTMTG00000020188) #15 SLC45A4 (ENSTMTG00000020178) #16 ENSTMTG00000020169 #20 PTK2 (ENSTMTG00000020097) #22 ENSTMTG00000020081 AGO2 (ENSTMTG00000019370) #23 CHRAC1 (ENSTMTG00000019319) #24 TRAPPC9 (ENSTMTG00000019269) #25 ENSTMTG00000019257 #26 KCNK9 (ENSTMTG00000019248) #26 ENSTMTG00000019228 ENSTMTG00000019203 ENSTMTG00000019149 #28 ENSTMTG00000019087 #28 KHDRBS3 (ENSTMTG00000019040) #36 ENSTMTG00000019019 ZFAT (ENSTMTG00000018733) #37 ST3GAL1 (ENSTMTG00000018689) ENSTMTG00000018673 painted turtle MODERN SPECIES 2424 ENSCPBG00000019069 ENSCPBG00000019071 ##8 ENSCPBG00000019072 ##8 LYPD2 (ENSCPBG00000019073) THEM6 (ENSCPBG00000019074) ENSCPBG00000019075 ##8 PSCA (ENSCPBG00000019077) #8 ARC (ENSCPBG00000019078) #10 ADGRB1 (ENSCPBG00000019081) #11 TSNARE1 (ENSCPBG00000019095) #12 PTP4A3 (ENSCPBG00000019106) #14 ENSCPBG00000019116 GPR20 (ENSCPBG00000019121) #15 SLC45A4 (ENSCPBG00000019127) #16 DENND3 (ENSCPBG00000019131) #20 PTK2 (ENSCPBG00000019149) #22 ENSCPBG00000019180 AGO2 (ENSCPBG00000019183) #23 CHRAC1 (ENSCPBG00000019186) #24 TRAPPC9 (ENSCPBG00000019213) #25 KCNK9 (ENSCPBG00000019611) #26 ENSCPBG00000019617 #27 ENSCPBG00000019626 FAM135B (ENSCPBG00000019633) #28 KHDRBS3 (ENSCPBG00000019654) #36 ZFAT (ENSCPBG00000019667) #37 ST3GAL1 (ENSCPBG00000019674) NDRG1 (ENSCPBG00000019688) CCN4 (ENSCPBG00000019695) ENSCPBG00000019699 ENSCPBG00000019703 Testudinidae ANCESTRAL SPECIES 111 ENSGT00970000197866 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698.g ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 2238 ENSCABG00000000605 #22 ENSCABG00000000560 #22 ENSCABG00000000543 AGO2 (ENSCABG00000000467) #23 CHRAC1 (ENSCABG00000000454) #24 TRAPPC9 (ENSCABG00000000390) #25 Abingdon island giant tortoise MODERN SPECIES 2238 ENSCABG00000000605 #22 ENSCABG00000000560 #22 ENSCABG00000000543 AGO2 (ENSCABG00000000467) #23 CHRAC1 (ENSCABG00000000454) #24 TRAPPC9 (ENSCABG00000000390) #25 Goode s thornscrub tortoise MODERN SPECIES 156 ENSGEVG00005014486 ENSGEVG00005014447 GPR20 (ENSGEVG00005014409) #15 SLC45A4 (ENSGEVG00005014385) #16 DENND3 (ENSGEVG00005014317) #20 PTK2 (ENSGEVG00005014062) #22 ENSGEVG00005013974 AGO2 (ENSGEVG00005013907) #23 CHRAC1 (ENSGEVG00005013811) #24 TRAPPC9 (ENSGEVG00005013635) #25 Anura ANCESTRAL SPECIES 207 ENSGT00390000003914 #10 ENSGT00940000157432.C #11 ENSGT01000000214440.A.a.a #12 ENSGT00940000159581 #14 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00940000155239 #23 ENSGT00510000048543 #24 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000164160 ENSGT00940000161019 ENSGT00940000156079 #28 Frog MODERN SPECIES 6 ENSXETG00000042809 arc (ENSXETG00000045973) #10 adgrb1 (ENSXETG00000019150) #11 tsnare1 (ENSXETG00000023632) #12 ENSXETG00000045355 ENSXETG00000036147 ENSXETG00000045004 cox11 (ENSXETG00000023638) ptp4a3 (ENSXETG00000023744) #14 XB5813854 [provisional:ankrd52] (ENSXETG00000023747) gpr20 (ENSXETG00000023749) #15 slc45a4 (ENSXETG00000023750) #16 dennd3 (ENSXETG00000023753) #20 rplp1 (ENSXETG00000023754) ago2 (ENSXETG00000023755) #23 ptk2 (ENSXETG00000023764) #22 ENSXETG00000048310 chrac1 (ENSXETG00000007962) #24 trappc9 (ENSXETG00000023767) #25 kcnk9 (ENSXETG00000038355) #26 ENSXETG00000038065 ENSXETG00000043702 ENSXETG00000046422 fam135b (ENSXETG00000033168) #28 col22a1 (ENSXETG00000034204) #27 ENSXETG00000019414 ENSXETG00000036977 ENSXETG00000042719 khdrbs3 (ENSXETG00000009227) #36 ENSXETG00000045544 zfat (ENSXETG00000020631) #37 Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000013000 ZFAT (ENSLLEG00000013029) #37 ENSLLEG00000013120 ENSLLEG00000013143 ENSLLEG00000013185 THEM6 (ENSLLEG00000013240) ENSLLEG00000013258 ENSLLEG00000013302 ENSLLEG00000013383 GPR20 (ENSLLEG00000013406) #15 SLC45A4 (ENSLLEG00000013430) #16 ENSLLEG00000013531 ENSLLEG00000013555 ENSLLEG00000013580 DENND3 (ENSLLEG00000013633) #20 PTK2 (ENSLLEG00000013830) #22 ENSLLEG00000015343 AGO2 (ENSLLEG00000015411) #23 ENSLLEG00000015828 ENSLLEG00000015849 STK3 (ENSLLEG00000015996) OSR2 (ENSLLEG00000017230) VPS13B (ENSLLEG00000017351) ENSLLEG00000017840 ENSLLEG00000017948 RGS22 (ENSLLEG00000018029) FBXO43 (ENSLLEG00000018985) ENSLLEG00000019053 SPAG1 (ENSLLEG00000019184) ENSLLEG00000020293 RNF19A (ENSLLEG00000020333) Coelacanth MODERN SPECIES 1170 PTK2 (ENSLACG00000011204) #22 rplp1 (ENSLACG00000012630) Actinopterygii ANCESTRAL SPECIES 2 ENSGT00940000161897.b.a ENSGT00940000163790 ENSGT00390000016546 ENSGT00940000160387 ENSGT00940000156930 ENSGT00940000160042 ENSGT00940000154491.c ENSGT00950000183081.b.i.a ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000163557.C ENSGT00940000159308 #27 ENSGT00940000164076.a.b ENSGT00940000164160 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 ENSGT01060000248575.D.c.b.a.a Neopterygii ANCESTRAL SPECIES 34 ENSGT00940000161897.b.b ENSGT00940000163790 ENSGT00390000016546 ENSGT00940000160387 ENSGT00940000156930 ENSGT00940000160042 ENSGT00940000154491.c ENSGT00950000183081.b.i.a ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000166193 ENSGT01040000240444.B #15 ENSGT00950000182914.a.a.a #16 ENSGT00940000155784.C #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00980000199189 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00390000006486 #25 ENSGT00940000159791 #26 ENSGT00940000163129 ENSGT00940000164558 ENSGT00940000163557.C ENSGT00940000159308 #27 ENSGT00940000164076.a.b ENSGT00940000164160 ENSGT00940000156079 #28 ENSGT00940000157280 #36 ENSGT00940000156658 #37 Spotted gar MODERN SPECIES 649 bop1 (ENSLOCG00000007429) SCX (ENSLOCG00000007444) ENSLOCG00000007454 hgh1 (ENSLOCG00000007462) ENSLOCG00000007478 ENSLOCG00000007509 ENSLOCG00000007544 scrt1b (ENSLOCG00000007573) zgc:63863 (ENSLOCG00000007587) dgat1a (ENSLOCG00000007601) cfap20 (ENSLOCG00000007614) ENSLOCG00000007644 GPR20 (ENSLOCG00000018334) #15 SLC45A4 (ENSLOCG00000007657) #16 DENND3 (ENSLOCG00000007668) #20 PTK2 (ENSLOCG00000007702) #22 rplp1 (ENSLOCG00000007729) ENSLOCG00000007752 ago2 (ENSLOCG00000007766) #23 chrac1 (ENSLOCG00000007800) TRAPPC9 (ENSLOCG00000007814) #25 SALL3 (ENSLOCG00000007831) atp9b (ENSLOCG00000007857) nfatc1 (ENSLOCG00000007875) smim13 (ENSLOCG00000007898) nedd9 (ENSLOCG00000007912) TMEM170B (ENSLOCG00000007926) ADTRP (ENSLOCG00000007936) HIVEP1 (ENSLOCG00000007963) edn1 (ENSLOCG00000007983) ENSLOCG00000007995 Osteoglossocephalai ANCESTRAL SPECIES 74 ENSGT00390000016546 ENSGT00940000160387 ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a ENSGT00940000160042 ENSGT00940000154491.c.b ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000166193 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b Clupeocephala ANCESTRAL SPECIES 562 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES 153 ENSGT00690000103873 ENSGT00940000156215 ENSGT00940000159104.d ENSGT00940000159300 ENSGT00940000158587.c.a ENSGT00950000182872.f.a.b.o ENSGT00940000159581.b.a #14 ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.a ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000155113.a.a.a #22 ENSGT00980000199189 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00390000012412 ENSGT00940000157222.a ENSGT00390000018110 ENSGT00940000164478.b ENSGT00940000160520.f ENSGT00940000155471.d ENSGT00940000156541 ENSGT00940000155697.A.b ENSGT00390000003571.h ENSGT00390000001827 ENSGT00940000159099 ENSGT00390000012832 Clupeiformes ANCESTRAL SPECIES 198 ENSGT00940000159581.b.a #14 ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.a ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00940000154491.c.b ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000155113.a.a.a #22 ENSGT00980000199189 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00390000012412 ENSGT00940000157222.a ENSGT00390000018110 ENSGT00940000160520.f ENSGT00940000155471.d ENSGT00940000156541 ENSGT00940000155697.A.b ENSGT00390000003571.h ENSGT00390000001827 ENSGT00940000159099 ENSGT00390000012832 ENSGT00390000016277.a.k Atlantic herring MODERN SPECIES 2 TMEM67 (ENSCHAG00000001604) c4b (ENSCHAG00000002061) ENSCHAG00000003245 ENSCHAG00000003355 ENSCHAG00000003497 PTP4A3 (ENSCHAG00000003529) #14 csnk2a1 (ENSCHAG00000003578) ENSCHAG00000004070 SCX (ENSCHAG00000004196) MROH1 (ENSCHAG00000004383) scrt1b (ENSCHAG00000006982) dgat1b (ENSCHAG00000007020) GPR20 (ENSCHAG00000007678) #15 SLC45A4 (ENSCHAG00000007693) #16 DENND3 (ENSCHAG00000007743) #20 ptk2ab (ENSCHAG00000008679) #22 ENSCHAG00000015046 ENSCHAG00000015073 MRS2 (ENSCHAG00000015172) ENSCHAG00000015423 CPQ (ENSCHAG00000015473) ENSCHAG00000015503 cmtm8b (ENSCHAG00000015856) ctnnb1 (ENSCHAG00000015874) ULK4 (ENSCHAG00000016058) TRAK1 (ENSCHAG00000016326) ENSCHAG00000017565 ccka (ENSCHAG00000017599) cnot10 (ENSCHAG00000017640) trim71 (ENSCHAG00000018831) TCAIM (ENSCHAG00000018891) Denticle herring MODERN SPECIES 86 ENSDCDG00000027706 ptk2ab (ENSDCDG00000026011) #22 ENSDCDG00000025944 SLC45A4 (ENSDCDG00000025942) #16 dgat1b (ENSDCDG00000025658) ENSDCDG00000025632 Otophysi ANCESTRAL SPECIES 143 ENSGT00690000103873 ENSGT00940000156215 ENSGT00940000159104.d ENSGT00940000159300 ENSGT00940000158587.c.a ENSGT00950000182872.f.a.b.o ENSGT00940000159581.b.a #14 ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.a ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000155113.a.a.a #22 ENSGT00390000000724.c.b.c ENSGT00940000156554.a ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000157244.a.b ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b ENSGT00940000167106 ENSGT00940000159463 ENSGT00950000182844.b.b.a ENSGT00940000161384 ENSGT00940000157343.a.b ENSGT00940000159724 ENSGT00530000063745.a Characiphysae ANCESTRAL SPECIES ENSGT00940000156215 ENSGT00940000159300 ENSGT00940000159104.d ENSGT00940000158587.c.a ENSGT00950000182872.f.a.b.o ENSGT00940000159581.b.a #14 ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.a ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00940000154491.c.b ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000155113.a.a.a #22 ENSGT00390000000724.c.b.c ENSGT00940000156554.a ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000157244.a.b ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b ENSGT00940000167106 ENSGT00940000159463 ENSGT00950000182844.b.b.a ENSGT00940000161384 ENSGT00940000157343.a.b ENSGT00940000159724 ENSGT00530000063745.a Channel catfish MODERN SPECIES PHF20L1 (ENSIPUG00000004582) tg (ENSIPUG00000004656) SLA (ENSIPUG00000004701) wisp1 (ENSIPUG00000004725) ndrg1b (ENSIPUG00000004795) ptp4a3 (ENSIPUG00000005240) #14 csnk2a1 (ENSIPUG00000005268) SCX (ENSIPUG00000005332) mroh1 (ENSIPUG00000005350) ENSIPUG00000005537 ENSIPUG00000005547 ENSIPUG00000005558 dgat1b (ENSIPUG00000005568) GPR20 (ENSIPUG00000005597) #15 SLC45A4 (ENSIPUG00000005611) #16 ptk2ab (ENSIPUG00000005669) #22 ldlrad4b (ENSIPUG00000006109) fam210ab (ENSIPUG00000006139) mc5rb (ENSIPUG00000006145) mc2r (ENSIPUG00000006159) lmna (ENSIPUG00000006185) pear1 (ENSIPUG00000006288) gpatch4 (ENSIPUG00000006348) nes (ENSIPUG00000006413) mef2d (ENSIPUG00000006444) rhbg (ENSIPUG00000006503) hapln2 (ENSIPUG00000006549) bcan (ENSIPUG00000006560) isg20l2 (ENSIPUG00000006645) Rrnad1 (ENSIPUG00000006657) s100a1 (ENSIPUG00000006680) Characiphysae_b ANCESTRAL SPECIES 2 ENSGT00940000156215 ENSGT00940000159104.d ENSGT00940000159300 ENSGT00940000158587.c.a ENSGT00950000182872.f.a.b.o ENSGT00940000159581.b.a #14 ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.a ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00940000154491.c.b ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000155113.a.a.a #22 ENSGT00390000000724.c.b.c ENSGT00940000156554.a ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000157244.a.b ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b ENSGT00940000167106 ENSGT00940000159463 ENSGT00950000182844.b.b.a ENSGT00940000161384 ENSGT00940000157343.a.b ENSGT00940000159724 ENSGT00530000063745.a Characoidei ANCESTRAL SPECIES 7 ENSGT00940000154412.B.a ENSGT00940000156215 ENSGT00940000159104.d ENSGT00940000159300 ENSGT00940000158587.c.a ENSGT00950000182872.f.a.b.o ENSGT00940000159581.b.a #14 ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.a ENSGT00940000156930 ENSGT00940000154491.c.b ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000155113.a.a.a #22 ENSGT00390000000724.c.b.c ENSGT00940000156554.a ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000157244.a.b ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b ENSGT00940000167106 ENSGT00940000159463 ENSGT00950000182844.b.b.a ENSGT00940000161384 ENSGT00940000157343.a.b ENSGT00940000159724 ENSGT00530000063745.a Red-bellied piranha MODERN SPECIES 210 ENSPNAG00000028907 PHF20L1 (ENSPNAG00000028885) tg (ENSPNAG00000028815) SLA (ENSPNAG00000028538) ccn4b (ENSPNAG00000028530) ndrg1b (ENSPNAG00000028515) PTP4A3 (ENSPNAG00000028504) #14 csnk2a1 (ENSPNAG00000028488) SCX (ENSPNAG00000004359) ENSPNAG00000028407 SCRT1 (ENSPNAG00000027880) dgat1b (ENSPNAG00000027855) GPR20 (ENSPNAG00000006782) #15 SLC45A4 (ENSPNAG00000005476) #16 DENND3 (ENSPNAG00000027692) #20 ptk2ab (ENSPNAG00000027658) #22 Mexicana tetra MODERN SPECIES 1 ENSAMXG00000039010 ENSAMXG00000018473 SLA (ENSAMXG00000036343) tg (ENSAMXG00000018497) ccn4b (ENSAMXG00000036329) ndrg1b (ENSAMXG00000038707) PTP4A3 (ENSAMXG00000041350) #14 csnk2a1 (ENSAMXG00000034564) SCX (ENSAMXG00000018584) ENSAMXG00000018592 SCRT1 (ENSAMXG00000042624) dgat1b (ENSAMXG00000037012) GPR20 (ENSAMXG00000031984) #15 SLC45A4 (ENSAMXG00000018626) #16 DENND3 (ENSAMXG00000018629) #20 ptk2ab (ENSAMXG00000018637) #22 ldlrad4b (ENSAMXG00000018643) fam210ab (ENSAMXG00000018649) mc5rb (ENSAMXG00000024935) mc2r (ENSAMXG00000025097) lmna (ENSAMXG00000018659) ENSAMXG00000018680 gpatch4 (ENSAMXG00000034049) ENSAMXG00000018698 nes (ENSAMXG00000018712) mef2d (ENSAMXG00000018717) rhbg (ENSAMXG00000018727) hapln2 (ENSAMXG00000037946) bcan (ENSAMXG00000018740) ENSAMXG00000034827 mettl25b (ENSAMXG00000018760) Electric eel MODERN SPECIES 39 ENSEEEG00000017206 ENSEEEG00000017207 SLA (ENSEEEG00000017210) ENSEEEG00000017213 ccn4b (ENSEEEG00000017214) ndrg1b (ENSEEEG00000017216) PTP4A3 (ENSEEEG00000017232) #14 csnk2a1 (ENSEEEG00000017246) SCX (ENSEEEG00000017312) ENSEEEG00000017328 scrt1b (ENSEEEG00000017828) dgat1b (ENSEEEG00000017831) GPR20 (ENSEEEG00000017833) #15 SLC45A4 (ENSEEEG00000017834) #16 DENND3 (ENSEEEG00000017835) #20 ptk2ab (ENSEEEG00000017854) #22 ldlrad4b (ENSEEEG00000018125) fam210ab (ENSEEEG00000018128) mc5rb (ENSEEEG00000018130) mc2r (ENSEEEG00000018131) lmna (ENSEEEG00000018134) ENSEEEG00000018143 Cyprinoidei ANCESTRAL SPECIES 53 ENSGT00940000177637 ENSGT00940000159300 ENSGT00940000159104.d ENSGT00940000158587.c.a ENSGT00950000182872.f.a.b.o ENSGT00940000159581.b.a #14 ENSGT00390000004215.a.b.b.c.b.d ENSGT00990000210053 ENSGT00940000161897.a ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000155113.a.a.a #22 ENSGT00390000000724.c.b.c ENSGT00940000156554.a ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000157244.a.b ENSGT00940000155333.B ENSGT00910000144338 ENSGT00940000155425 ENSGT00570000079224 ENSGT00390000002390.b.e ENSGT00940000154412.B.a ENSGT00940000158641.a.b ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 28 ENSGT00940000177637 ENSGT00940000159300.e ENSGT00940000159104.d.b ENSGT00940000158587.c.a.d ENSGT00950000182872.f.a.b.o.c ENSGT00940000159581.b.a.f.b #14 ENSGT00390000004215.a.b.b.c.b.d.k ENSGT00990000210053.a ENSGT00940000161897.a.a ENSGT00940000156930.`b ENSGT00940000154491.c.a.a.b ENSGT00950000183081.b.i.a.k ENSGT01040000240444.B.b.i #15 ENSGT00950000182914.a.a.a.c.a.e #16 ENSGT00940000155784.C.u.a.a.b #20 ENSGT00940000155113.a.a.a.a #22 ENSGT00390000000724.c.b.c.e.a ENSGT00940000156554.a.g ENSGT01030000234510.a.a.a.a.a.a.h.a.a ENSGT01030000234510.a.a.b ENSGT00940000157244.a.b.b ENSGT00940000155333.B.f ENSGT00940000155425.ab.b ENSGT00570000079224.h ENSGT00390000002390.b.e.f ENSGT00940000154412.B.a.c.a ENSGT00940000158641.a.b.b ENSGT00390000003488.b.b.b ENSGT00940000160002.r ENSGT00390000010811.b Cyprininae_a ANCESTRAL SPECIES 7 ENSGT00940000177637 ENSGT00940000159300.e ENSGT00940000159104.d.b ENSGT00940000158587.c.a.d ENSGT00950000182872.f.a.b.o.c ENSGT00940000159581.b.a.f.b #14 ENSGT00390000004215.a.b.b.c.b.d.k ENSGT00990000210053.a ENSGT00940000161897.a.a ENSGT00940000156930.`b ENSGT00940000154491.c.a.a.b ENSGT00950000183081.b.i.a.k ENSGT01040000240444.B.b.i #15 ENSGT00950000182914.a.a.a.c.a.e #16 ENSGT00940000155784.C.u.a.a.b #20 ENSGT00940000155113.a.a.a.a #22 ENSGT00390000000724.c.b.c.e.a ENSGT00940000156554.a.g ENSGT01030000234510.a.a.a.a.a.a.h.a.a ENSGT01030000234510.a.a.b.e ENSGT00940000157244.a.b.b ENSGT00940000155333.B.f ENSGT00940000155425.ab.b ENSGT00570000079224.h ENSGT00390000002390.b.e.e ENSGT00940000154412.B.a.c.b ENSGT00940000158641.a.b.a ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b.a ENSGT00940000160002.q ENSGT00390000010811.a Common carp reference MODERN SPECIES 47 ENSCCRG00000060741 SLA (ENSCCRG00000041777) ccn4b (ENSCCRG00000045380) ndrg1b (ENSCCRG00000045391) ENSCCRG00000080182 #14 csnk2a1 (ENSCCRG00000045492) zgc:194210 (ENSCCRG00000045624) ENSCCRG00000045640 ENSCCRG00000012814 scrt1b (ENSCCRG00000030586) ENSCCRG00000070623 dgat1b (ENSCCRG00000019769) ENSCCRG00000081319 #15 ENSCCRG00000019820 #16 ENSCCRG00000019848 #20 ptk2ab (ENSCCRG00000020113) #22 ldlrad4b (ENSCCRG00000059613) fam210ab (ENSCCRG00000035348) mc5rb (ENSCCRG00000079865) mc2r (ENSCCRG00000035328) lmna (ENSCCRG00000023255) ENSCCRG00000023214 pdia7 (ENSCCRG00000028167) cct3 (ENSCCRG00000005446) sema6e (ENSCCRG00000043015) ENSCCRG00000058386 tnfaip8l2b (ENSCCRG00000064921) lysmd1 (ENSCCRG00000026581) scnm1 (ENSCCRG00000078172) tmod4 (ENSCCRG00000026478) VPS72 (ENSCCRG00000026457) Golden-line barbel MODERN SPECIES 95 PHF20L1 (ENSSGRG00000000595) ENSSGRG00000000605 ENSSGRG00000000607 SLA (ENSSGRG00000000611) ccn4b (ENSSGRG00000000649) ndrg1b (ENSSGRG00000000652) PTP4A3 (ENSSGRG00000000656) #14 csnk2a1 (ENSSGRG00000000675) zgc:194210 (ENSSGRG00000000722) ENSSGRG00000000744 scrt1b (ENSSGRG00000005223) dgat1b (ENSSGRG00000005251) GPR20 (ENSSGRG00000005946) #15 SLC45A4 (ENSSGRG00000005950) #16 DENND3 (ENSSGRG00000005955) #20 ptk2ab (ENSSGRG00000005999) #22 ldlrad4b (ENSSGRG00000006600) fam210ab (ENSSGRG00000006601) mc5rb (ENSSGRG00000006604) mc2r (ENSSGRG00000006606) lmna (ENSSGRG00000006624) ENSSGRG00000007303 pdia7 (ENSSGRG00000007311) cct3 (ENSSGRG00000007459) ENSSGRG00000007626 ENSSGRG00000007627 ENSSGRG00000007628 ENSSGRG00000007629 ENSSGRG00000007630 sema6e (ENSSGRG00000007636) tnfaip8l2b (ENSSGRG00000007648) Goldfish MODERN SPECIES 7 c1r (ENSCARG00000019539) ENSCARG00000019561 PHF20L1 (ENSCARG00000019577) SLA (ENSCARG00000019613) ccn4b (ENSCARG00000019620) ndrg1b (ENSCARG00000019635) ENSCARG00000019685 #14 csnk2a1 (ENSCARG00000019702) zgc:194210 (ENSCARG00000019755) SCX (ENSCARG00000019761) scrt1b (ENSCARG00000019765) dgat1b (ENSCARG00000019783) GPR20 (ENSCARG00000019871) #15 SLC45A4 (ENSCARG00000019877) #16 DENND3 (ENSCARG00000019891) #20 ptk2ab (ENSCARG00000019996) #22 ldlrad4b (ENSCARG00000022590) fam210ab (ENSCARG00000022601) mc5rb (ENSCARG00000022612) mc2r (ENSCARG00000022619) lmna (ENSCARG00000022635) ENSCARG00000022876 pdia7 (ENSCARG00000022912) cct3 (ENSCARG00000023453) ENSCARG00000024212 ENSCARG00000024242 sema6e (ENSCARG00000024262) ENSCARG00000024301 tnfaip8l2b (ENSCARG00000024303) lysmd1 (ENSCARG00000024317) scnm1 (ENSCARG00000024326) Cyprininae ANCESTRAL SPECIES 28 ENSGT00940000155783.j.a ENSGT00690000103873.b ENSGT00940000156215.r ENSGT00940000159300.f ENSGT00940000159104.d.a ENSGT00940000158587.c.a.c ENSGT00940000159581.b.a.f.a.a #14 ENSGT00390000004215.a.b.b.c.b.d.l ENSGT00940000161897.a.b ENSGT00940000156930.ab ENSGT00940000154491.c.a.a.a ENSGT00950000183081.b.i.a.l ENSGT01040000240444.B.b.j #15 ENSGT00950000182914.a.a.a.c.a.f #16 ENSGT00940000155784.C.u.a.a.a #20 ENSGT00940000155113.a.a.a.b #22 ENSGT00390000000724.c.b.c.e.b ENSGT00940000156554.a.h ENSGT01030000234510.a.a.a.a.a.a.h.a.b ENSGT00940000156212.n.b ENSGT00950000183084.b.a.a.b.e.a.b ENSGT00950000183084.b.a.a.a.i ENSGT00940000157473.b.a ENSGT00940000155783.j.b ENSGT00690000103873.a ENSGT00940000156215.q ENSGT00940000177637 ENSGT00940000159300.e ENSGT00940000159104.d.b ENSGT00940000158587.c.a.d ENSGT00950000182872.f.a.b.o.c Cyprininae_a ANCESTRAL SPECIES 181 ENSGT00690000103873.b ENSGT00940000156215.r ENSGT00940000159300.f ENSGT00940000159104.d.a ENSGT00940000158587.c.a.c ENSGT00940000159581.b.a.f.a.a #14 ENSGT00390000004215.a.b.b.c.b.d.l ENSGT00940000161897.a.b ENSGT00940000156930.ab ENSGT00940000154491.c.a.a.a ENSGT00950000183081.b.i.a.l ENSGT01040000240444.B.b.j #15 ENSGT00950000182914.a.a.a.c.a.f #16 ENSGT00940000155784.C.u.a.a.a #20 ENSGT00940000155113.a.a.a.b #22 ENSGT00390000000724.c.b.c.e.b ENSGT00940000156554.a.h ENSGT01030000234510.a.a.a.a.a.a.h.a.b ENSGT01030000234510.a.a.b.f ENSGT00940000157244.a.b.a ENSGT00940000155333.B.e ENSGT00940000155425.ab.a ENSGT00570000079224.g ENSGT00390000002390.b.e.f ENSGT00940000154412.B.a.c.a ENSGT00940000158641.a.b.b ENSGT00390000003488.b.b.b ENSGT00940000160002.r ENSGT00390000010811.b ENSGT00940000158734.e Common carp reference MODERN SPECIES 2 PHF20L1 (ENSCCRG00000019700) tg (ENSCCRG00000019652) SLA (ENSCCRG00000019688) ENSCCRG00000067838 ENSCCRG00000061748 ENSCCRG00000079857 #14 ENSCCRG00000042495 csnk2a1 (ENSCCRG00000013280) ENSCCRG00000013274 ENSCCRG00000012824 scrt1b (ENSCCRG00000027533) dgat1b (ENSCCRG00000050053) ENSCCRG00000080553 #15 ENSCCRG00000059607 #16 ENSCCRG00000050041 #20 ptk2ab (ENSCCRG00000042172) #22 ldlrad4b (ENSCCRG00000062199) fam210ab (ENSCCRG00000035323) ENSCCRG00000049724 lmna (ENSCCRG00000023524) ENSCCRG00000024580 pdia7 (ENSCCRG00000005732) cct3 (ENSCCRG00000005632) ENSCCRG00000005900 ENSCCRG00000010934 ENSCCRG00000075497 sema6e (ENSCCRG00000043021) lysmd1 (ENSCCRG00000057750) ENSCCRG00000074329 tnfaip8l2b (ENSCCRG00000061296) ENSCCRG00000076523 Golden-line barbel MODERN SPECIES 458 rbp5 (ENSSGRG00000015917) c1s.1 (ENSSGRG00000015919) PHF20L1 (ENSSGRG00000015920) ENSSGRG00000015922 tg (ENSSGRG00000015924) SLA (ENSSGRG00000015927) ccn4b (ENSSGRG00000015941) ENSSGRG00000015942 #14 csnk2a1 (ENSSGRG00000015953) SCX (ENSSGRG00000015954) ENSSGRG00000015956 scrt1b (ENSSGRG00000015958) dgat1b (ENSSGRG00000015966) SLC45A4 (ENSSGRG00000016456) #16 ENSSGRG00000016460 #20 ptk2ab (ENSSGRG00000016511) #22 Goldfish DUPLICATION Goldfish MODERN SPECIES 35 zdhhc18a (ENSCARG00000028822) pigv (ENSCARG00000028804) ARID1A (ENSCARG00000028624) SNIP1 (ENSCARG00000028599) dnali1 (ENSCARG00000028576) rspo1 (ENSCARG00000028561) FHL3 (ENSCARG00000028549) utp11 (ENSCARG00000028537) pou3f1 (ENSCARG00000028532) rragca (ENSCARG00000028527) GJA9 (ENSCARG00000028523) rhbdl2 (ENSCARG00000028344) dgat1b (ENSCARG00000028167) GPR20 (ENSCARG00000028151) #15 SLC45A4 (ENSCARG00000028146) #16 ptk2ab (ENSCARG00000027545) #22 ldlrad4b (ENSCARG00000027512) fam210ab (ENSCARG00000027500) lmna (ENSCARG00000027211) ENSCARG00000027182 cct3 (ENSCARG00000026999) ENSCARG00000026953 ENSCARG00000026939 sema6e (ENSCARG00000026829) sema6e (ENSCARG00000026749) tnfaip8l2b (ENSCARG00000026725) lysmd1 (ENSCARG00000026711) tmod4 (ENSCARG00000026657) mcl1b (ENSCARG00000026650) ensab (ENSCARG00000026641) onecutl (ENSCARG00000026616) Goldfish MODERN SPECIES 337 ENSCARG00000040166 scrt1b (ENSCARG00000041649) dgat1b (ENSCARG00000041841) SLC45A4 (ENSCARG00000045305) #16 DENND3 (ENSCARG00000045324) #20 ptk2ab (ENSCARG00000045562) #22 ldlrad4b (ENSCARG00000047317) fam210ab (ENSCARG00000047326) Zebrafish MODERN SPECIES 7 SLA (ENSDARG00000100287) tg (ENSDARG00000020084) ccn4b (ENSDARG00000076685) ndrg1b (ENSDARG00000010420) ENSDARG00000054814 #14 csnk2a1 (ENSDARG00000002082) zgc:194210 (ENSDARG00000073799) SCX (ENSDARG00000011635) ENSDARG00000016573 scrt1b (ENSDARG00000040214) dgat1b (ENSDARG00000054914) GPR20 (ENSDARG00000077427) #15 ENSDARG00000019585 SLC45A4 (ENSDARG00000077326) #16 ENSDARG00000013153 #20 ptk2ab (ENSDARG00000004672) #22 ldlrad4b (ENSDARG00000054941) fam210ab (ENSDARG00000040186) mc5rb (ENSDARG00000054946) mc2r (ENSDARG00000054949) lmna (ENSDARG00000013415) ENSDARG00000060753 pdia7 (ENSDARG00000014015) cct3 (ENSDARG00000016173) ENSDARG00000076861 ENSDARG00000112961 sema6e (ENSDARG00000000189) tnfaip8l2b (ENSDARG00000046148) lysmd1 (ENSDARG00000054789) scnm1 (ENSDARG00000003027) tmod4 (ENSDARG00000020890) Otomorpha ANCESTRAL SPECIES 96 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000166193 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b ENSGT00940000162307 ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00730000111042 ENSGT00940000153117.A ENSGT00940000154655.a.i.b ENSGT01030000235077 ENSGT00940000176888 ENSGT00940000160706 ENSGT00390000010887.a ENSGT00940000155321.e ENSGT00390000008161.a.b ENSGT00390000015984 Clupeiformes ANCESTRAL SPECIES 15 ENSGT00940000159344 ENSGT00940000162732 ENSGT00940000157683 ENSGT00940000159188 ENSGT00940000155239 #23 ENSGT00940000166127 ENSGT00940000160042 ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000166193 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a.b #22 ENSGT00550000074698.a.b ENSGT00530000063461.A.b ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00730000111042 ENSGT00940000153117.A ENSGT00940000154655.a.i.b ENSGT01030000235077 ENSGT00940000160706 ENSGT00390000010887.a ENSGT00940000155321.e ENSGT00390000008161.a.b ENSGT00390000015984 ENSGT00940000158117 ENSGT00390000016823 Atlantic herring MODERN SPECIES 10 ENSCHAG00000020872 dlx6a (ENSCHAG00000020895) dlx5a (ENSCHAG00000020922) ago2 (ENSCHAG00000021026) #23 chrac1 (ENSCHAG00000023881) ENSCHAG00000023887 ENSCHAG00000023899 scrt1a (ENSCHAG00000023906) zgc:63863 (ENSCHAG00000023910) dgat1a (ENSCHAG00000023926) cfap20 (ENSCHAG00000024045) ENSCHAG00000024051 GPR20 (ENSCHAG00000024087) #15 SLC45A4 (ENSCHAG00000024097) #16 DENND3 (ENSCHAG00000024175) #20 PTK2 (ENSCHAG00000024267) #22 rplp1 (ENSCHAG00000025085) clptm1l (ENSCHAG00000025096) CSMD3 (ENSCHAG00000025377) ENSCHAG00000026391 trps1 (ENSCHAG00000026398) utp23 (ENSCHAG00000000495) rad21b (ENSCHAG00000000617) ENSCHAG00000000784 SLC30A8 (ENSCHAG00000000875) med30 (ENSCHAG00000000947) ext1b (ENSCHAG00000001106) SAMD12 (ENSCHAG00000001417) ENSCHAG00000001476 ENSCHAG00000001503 ENSCHAG00000001531 Denticle herring MODERN SPECIES 12 SLC25A13 (ENSDCDG00000028567) DYNC1I1 (ENSDCDG00000023856) ENSDCDG00000023800 ago2 (ENSDCDG00000023788) #23 chrac1 (ENSDCDG00000023780) ENSDCDG00000033344 ENSDCDG00000033340 scrt1a (ENSDCDG00000033337) zgc:63863 (ENSDCDG00000033334) dgat1a (ENSDCDG00000033086) cfap20 (ENSDCDG00000033065) ENSDCDG00000033064 GPR20 (ENSDCDG00000033058) #15 SLC45A4 (ENSDCDG00000033056) #16 DENND3 (ENSDCDG00000032981) #20 PTK2 (ENSDCDG00000032784) #22 rplp1 (ENSDCDG00000032758) clptm1l (ENSDCDG00000032720) CSMD3 (ENSDCDG00000032640) trps1 (ENSDCDG00000032596) ENSDCDG00000032595 ENSDCDG00000032593 ENSDCDG00000032591 sla1a (ENSDCDG00000032590) ccn4a (ENSDCDG00000032495) eif3hb (ENSDCDG00000032473) utp23 (ENSDCDG00000032468) ENSDCDG00000032466 ENSDCDG00000032464 sla1a (ENSDCDG00000032461) ccn4a (ENSDCDG00000032460) Otophysi ANCESTRAL SPECIES 170 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000157768 ENSGT00940000166193 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000157780 ENSGT00940000155602 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b ENSGT00510000047245 ENSGT00500000044921.a ENSGT00940000159017.a.b ENSGT00500000045044 ENSGT00390000018500.b.b.b ENSGT00390000013823.a ENSGT00950000182908.C.a ENSGT00950000182856.a.a.a ENSGT00940000178869 ENSGT00950000182908.C.b ENSGT00940000154486.b.a.b ENSGT00940000166341 ENSGT00940000163428.b.a Characiphysae ANCESTRAL SPECIES 26 ENSGT00940000166193 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000157780 ENSGT00940000155602 ENSGT00940000155784.C.u.b #20 ENSGT00940000164832.e.b ENSGT00940000155113.a.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b ENSGT00510000047245 ENSGT00500000044921.a ENSGT00940000159017.a.b ENSGT00500000045044 ENSGT00390000018500.b.b.b ENSGT00390000013823.a ENSGT00950000182908.C.a ENSGT00950000182856.a.a.a ENSGT00940000154486.b.a.b ENSGT00940000166341 ENSGT00940000163428.b.a ENSGT00940000161409 ENSGT00390000005553 Channel catfish MODERN SPECIES 16 nfatc1 (ENSIPUG00000002936) atp9b (ENSIPUG00000002960) sall3b (ENSIPUG00000003006) GALR1 (ENSIPUG00000003021) ENSIPUG00000003031 znf516 (ENSIPUG00000003046) tshz1 (ENSIPUG00000003059) cndp2 (ENSIPUG00000003077) ENSIPUG00000003090 #20 klhl7 (ENSIPUG00000003141) lrrc3b (ENSIPUG00000003166) slc45a4 (ENSIPUG00000003180) #16 ENSIPUG00000003213 #15 ggcta (ENSIPUG00000003221) ENSIPUG00000003235 ptk2 (ENSIPUG00000003268) #22 rplp1 (ENSIPUG00000003514) clptm1l (ENSIPUG00000003529) snrpd1 (ENSIPUG00000003576) ggcta (ENSIPUG00000003587) znrf2 (ENSIPUG00000003600) mturn (ENSIPUG00000003620) SH3BP5 (ENSIPUG00000003633) btd (ENSIPUG00000003644) ANKRD28 (ENSIPUG00000003678) Snx13 (ENSIPUG00000003913) ENSIPUG00000004050 twist1a (ENSIPUG00000004071) FERD3L (ENSIPUG00000004109) twistnb (ENSIPUG00000004117) tmem196 (ENSIPUG00000004133) Characiphysae_b ANCESTRAL SPECIES 17 ENSGT00940000157616.j.a ENSGT00940000157071 ENSGT00940000159356.a.b ENSGT01050000244841.A.b.a.b.a.a.i ENSGT00390000014772.k ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000156500 ENSGT00940000166193 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000157780 ENSGT00940000155602 ENSGT00940000155784.C.u.b #20 ENSGT00940000164832.e.b ENSGT00940000155113.a.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b ENSGT00510000047245 ENSGT00500000044921.a ENSGT00940000159017.a.b ENSGT00500000045044 ENSGT00390000018500.b.b.b ENSGT00390000013823.a ENSGT00950000182908.C.a ENSGT00950000182856.a.a.a ENSGT00940000154486.b.a.b ENSGT00940000166341 ENSGT00940000163428.b.a ENSGT00940000161409 ENSGT00390000005553 Characoidei ANCESTRAL SPECIES 33 ENSGT00940000157616.j.a ENSGT00940000157071 ENSGT00940000159356.a.b ENSGT01050000244841.A.b.a.b.a.a.i ENSGT00390000014772.k ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000156500 ENSGT00940000166193 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000157780 ENSGT00940000155602 ENSGT00940000155784.C.u.b #20 ENSGT00940000164832.e.b ENSGT00940000155113.a.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b ENSGT00510000047245 ENSGT00500000044921.a ENSGT00940000159017.a.b ENSGT00500000045044 ENSGT00390000018500.b.b.b ENSGT00390000013823.a ENSGT00950000182908.C.a ENSGT00950000182856.a.a.a ENSGT00940000163428.b.a ENSGT00940000161409 ENSGT00390000005553 ENSGT00940000163281.b ENSGT01090000259987.b.a Mexicana tetra MODERN SPECIES 144 cndp2 (ENSAMXG00000043870) ENSAMXG00000016489 GPR20 (ENSAMXG00000025141) #15 SLC45A4 (ENSAMXG00000004424) #16 lrrc3b (ENSAMXG00000025609) klhl7 (ENSAMXG00000004443) DENND3 (ENSAMXG00000004469) #20 ENSAMXG00000031714 PTK2 (ENSAMXG00000004491) #22 rplp1 (ENSAMXG00000029436) clptm1l (ENSAMXG00000004561) snrpd1 (ENSAMXG00000004589) ggcta (ENSAMXG00000038966) znrf2a (ENSAMXG00000035513) mturn (ENSAMXG00000032980) SH3BP5 (ENSAMXG00000039958) btd (ENSAMXG00000039474) ANKRD28 (ENSAMXG00000004638) SNX13 (ENSAMXG00000004675) Red-bellied piranha MODERN SPECIES 68 nfatc1 (ENSPNAG00000017021) atp9b (ENSPNAG00000017126) sall3b (ENSPNAG00000017141) GALR1 (ENSPNAG00000017178) ENSPNAG00000017263 znf516 (ENSPNAG00000017286) tshz1 (ENSPNAG00000017293) cndp2 (ENSPNAG00000017310) ENSPNAG00000017423 GPR20 (ENSPNAG00000017441) #15 SLC45A4 (ENSPNAG00000017495) #16 lrrc3b (ENSPNAG00000017517) klhl7 (ENSPNAG00000017551) DENND3 (ENSPNAG00000017591) #20 ENSPNAG00000017618 PTK2 (ENSPNAG00000017725) #22 rplp1 (ENSPNAG00000017741) ENSPNAG00000017758 clptm1l (ENSPNAG00000017807) snrpd1 (ENSPNAG00000017824) ggcta (ENSPNAG00000017854) znrf2a (ENSPNAG00000017867) mturn (ENSPNAG00000017886) ENSPNAG00000017917 ifnphi1 (ENSPNAG00000017929) ENSPNAG00000005332 ENSPNAG00000017996 ENSPNAG00000018022 TANC2 (ENSPNAG00000018244) cyb561 (ENSPNAG00000003519) HDAC5 (ENSPNAG00000018413) Electric eel MODERN SPECIES 868 ENSEEEG00000013260 PTK2 (ENSEEEG00000013275) #22 rplp1 (ENSEEEG00000013353) clptm1l (ENSEEEG00000013365) snrpd1 (ENSEEEG00000013549) ggcta (ENSEEEG00000013550) znrf2a (ENSEEEG00000013551) mturn (ENSEEEG00000013552) SH3BP5 (ENSEEEG00000013553) btd (ENSEEEG00000013555) ENSEEEG00000013560 Cyprinoidei ANCESTRAL SPECIES 35 ENSGT00950000183186.B.b.d ENSGT00390000010209.c.a ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000157768 ENSGT00940000166193 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000157780 ENSGT00940000155602 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b ENSGT00510000047245 ENSGT00500000044921.a ENSGT01100000263547.a.b.b.b.b.a.b.a.a.a.b.a.a ENSGT00940000159017.a.b.a ENSGT00500000045044 ENSGT00390000018500.b.b.b ENSGT00390000013823.a ENSGT00950000182908.C.a ENSGT00950000182856.a.a.a ENSGT00940000178869 ENSGT00950000182908.C.b ENSGT00940000166341 ENSGT00940000163428.b.a Zebrafish MODERN SPECIES 10 zdhhc3b (ENSDARG00000058830) ENSDARG00000103817 ENSDARG00000099747 slc39a4 (ENSDARG00000059361) scrt1a (ENSDARG00000100821) zgc:63863 (ENSDARG00000099753) dgat1a (ENSDARG00000103503) cfap20 (ENSDARG00000100514) OXSM (ENSDARG00000098855) btr29 (ENSDARG00000099138) ENSDARG00000099438 SLC45A4 (ENSDARG00000104981) #16 lrrc3b (ENSDARG00000063215) klhl7 (ENSDARG00000101445) DENND3 (ENSDARG00000078797) #20 PTK2 (ENSDARG00000100456) #22 rplp1 (ENSDARG00000021864) clptm1l (ENSDARG00000021048) snrpd1 (ENSDARG00000011648) ggcta (ENSDARG00000076406) ENSDARG00000079456 znrf2a (ENSDARG00000077855) mturn (ENSDARG00000074505) SH3BP5 (ENSDARG00000100529) btd (ENSDARG00000099596) ENSDARG00000086326 SNX13 (ENSDARG00000013828) twist1a (ENSDARG00000030402) FERD3L (ENSDARG00000092160) ENSDARG00000028222 sp8a (ENSDARG00000011870) Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 55 ENSGT00390000014944.b.a ENSGT00950000183081.b.i.b.c ENSGT00390000004554.k.b ENSGT00940000157768.a ENSGT00940000166193.b ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b.d #16 ENSGT00940000157780.rb.b ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.b.b.b.b.b.a.b ENSGT00940000157768.b ENSGT00940000166193.a ENSGT00950000182914.a.a.a.c.b.c #16 ENSGT00940000157780.rb.a ENSGT00940000155602 ENSGT00940000155784.C.u.b.a #20 ENSGT00940000155113.a.a.b.a.a #22 ENSGT00550000074698.a.a ENSGT00940000155784.C.u.b.b #20 ENSGT00940000155113.a.a.b.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b.c ENSGT00510000047245.ob.a ENSGT00500000044921.a ENSGT01100000263547.a.b.b.b.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000159017.a.b.a.a ENSGT00500000045044.g ENSGT00390000018500.b.b.b.b ENSGT00390000013823.a ENSGT00950000182908.C.a.j.a.b ENSGT01030000234592.A.a.b.c.a.b.b ENSGT01030000234592.A.a.b.c.a.b.a.b.a Goldfish DUPLICATION Goldfish DUPLICATION Goldfish MODERN SPECIES 10 polr1f (ENSCARG00000064285) twist1a (ENSCARG00000064294) ENSCARG00000064310 SNX13 (ENSCARG00000064353) ENSCARG00000065533 ENSCARG00000065538 ENSCARG00000065541 #22 ENSCARG00000065552 clptm1l (ENSCARG00000065626) snrpd1 (ENSCARG00000065987) ENSCARG00000066016 ENSCARG00000066032 ENSCARG00000066038 mturn (ENSCARG00000066047) znrf2a (ENSCARG00000066061) PTK2 (ENSCARG00000066085) #22 znrf2a (ENSCARG00000066189) mturn (ENSCARG00000066197) SH3BP5 (ENSCARG00000066204) ENSCARG00000066288 ENSCARG00000067326 #22 DENND3 (ENSCARG00000067335) #20 tert (ENSCARG00000067362) ENSCARG00000067445 daxx (ENSCARG00000067608) zbtb22b (ENSCARG00000067623) ENSCARG00000067635 znf384a (ENSCARG00000067661) ENSCARG00000067664 FLOT1 (ENSCARG00000067669) ENSCARG00000067727 Goldfish MODERN SPECIES 10 wipf2b (ENSCARG00000044915) JUP (ENSCARG00000042945) eif1 (ENSCARG00000042807) ENSCARG00000042724 ENSCARG00000042659 ENSCARG00000067727 FLOT1 (ENSCARG00000067669) ENSCARG00000067664 znf384a (ENSCARG00000067661) ENSCARG00000067635 zbtb22b (ENSCARG00000067623) daxx (ENSCARG00000067608) ENSCARG00000067445 tert (ENSCARG00000067362) DENND3 (ENSCARG00000067335) #20 ENSCARG00000067326 #22 ENSCARG00000066288 SH3BP5 (ENSCARG00000066204) mturn (ENSCARG00000066197) znrf2a (ENSCARG00000066189) PTK2 (ENSCARG00000066085) #22 znrf2a (ENSCARG00000066061) mturn (ENSCARG00000066047) ENSCARG00000066038 ENSCARG00000066032 ENSCARG00000066016 snrpd1 (ENSCARG00000065987) clptm1l (ENSCARG00000065626) ENSCARG00000065552 ENSCARG00000065541 #22 ENSCARG00000065538 Goldfish MODERN SPECIES 10 SCGN (ENSCARG00000064106) rnf139 (ENSCARG00000064122) tmem65 (ENSCARG00000064144) ENSCARG00000064159 scn1bb (ENSCARG00000064173) sp4 (ENSCARG00000064203) sp8a (ENSCARG00000064243) ITGB8 (ENSCARG00000064263) ENSCARG00000064275 polr1f (ENSCARG00000064285) twist1a (ENSCARG00000064294) ENSCARG00000064310 SNX13 (ENSCARG00000064353) ENSCARG00000065533 ENSCARG00000065538 ENSCARG00000065541 #22 ENSCARG00000065552 clptm1l (ENSCARG00000065626) snrpd1 (ENSCARG00000065987) ENSCARG00000066016 ENSCARG00000066032 ENSCARG00000066038 mturn (ENSCARG00000066047) znrf2a (ENSCARG00000066061) PTK2 (ENSCARG00000066085) #22 znrf2a (ENSCARG00000066189) mturn (ENSCARG00000066197) SH3BP5 (ENSCARG00000066204) ENSCARG00000066288 ENSCARG00000067326 #22 DENND3 (ENSCARG00000067335) #20 Cyprininae_a ANCESTRAL SPECIES 43 ENSGT00940000180503.a ENSGT00940000160576.k ENSGT00390000014107.a.b.`b ENSGT00940000160042.a.b ENSGT00940000154491.c.a.b.a ENSGT00390000014944.b.b ENSGT00950000183081.b.i.b.d ENSGT00390000004554.k.a ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.b.b.b.b.b.a.b ENSGT00940000157768.b ENSGT00940000166193.a ENSGT00950000182914.a.a.a.c.b.c #16 ENSGT00940000157780.rb.a ENSGT00940000155602 ENSGT00940000155784.C.u.b.a #20 ENSGT00940000155113.a.a.b.a.a #22 ENSGT00550000074698.b ENSGT00550000074698.a.a ENSGT00530000063461.A.b.d ENSGT00510000047245.nb ENSGT01090000260586 ENSGT01100000263547.a.b.b.b.b.a.b.a.a.a.b.a.a.a.a.a ENSGT00940000159017.a.b.a.b ENSGT00500000045044.h ENSGT00390000018500.b.b.b.a ENSGT00950000182908.C.a.j.a.a ENSGT00950000182908.C.a.j.b ENSGT00950000182856.a.a.a.r ENSGT00940000166341.u.b ENSGT00940000163428.b.a.j.b ENSGT00940000161409.d Common carp reference MODERN SPECIES 12 ENSCCRG00000057921 ENSCCRG00000054779 ENSCCRG00000021214 scrt1a (ENSCCRG00000012351) zgc:63863 (ENSCCRG00000053054) dgat1a (ENSCCRG00000078368) cfap20 (ENSCCRG00000026035) ENSCCRG00000041711 ENSCCRG00000070727 ENSCCRG00000062535 ENSCCRG00000065659 ENSCCRG00000007227 #16 lrrc3b (ENSCCRG00000060096) klhl7 (ENSCCRG00000028109) ENSCCRG00000004661 #20 ENSCCRG00000000513 #22 rplp1 (ENSCCRG00000027873) clptm1l (ENSCCRG00000016498) snrpd1 (ENSCCRG00000064087) ENSCCRG00000066922 ENSCCRG00000076891 ENSCCRG00000060398 ENSCCRG00000004108 ENSCCRG00000079799 znrf2a (ENSCCRG00000016439) ENSCCRG00000016428 ENSCCRG00000078961 ENSCCRG00000063008 ENSCCRG00000016456 SNX13 (ENSCCRG00000070657) ENSCCRG00000038881 Golden-line barbel MODERN SPECIES 602 ENSSGRG00000053705 ENSSGRG00000053704 scrt1a (ENSSGRG00000053703) zgc:63863 (ENSSGRG00000053702) dgat1a (ENSSGRG00000053701) cfap20 (ENSSGRG00000053694) ENSSGRG00000053680 OXSM (ENSSGRG00000053679) SLC45A4 (ENSSGRG00000053676) #16 lrrc3b (ENSSGRG00000053675) lrrc3b (ENSSGRG00000053674) klhl7 (ENSSGRG00000053672) ENSSGRG00000053671 #20 ENSSGRG00000053665 #20 ENSSGRG00000053664 ENSSGRG00000053627 #22 rplp1 (ENSSGRG00000053617) snrpd1 (ENSSGRG00000053614) ENSSGRG00000053612 clptm1l (ENSSGRG00000053562) Cyprininae ANCESTRAL SPECIES 55 ENSGT00940000157768.a ENSGT00940000166193.b ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b.d #16 ENSGT00940000157780.rb.b ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.b.b.b.b.b.a.b ENSGT00940000157768.b ENSGT00940000166193.a ENSGT00950000182914.a.a.a.c.b.c #16 ENSGT00940000157780.rb.a ENSGT00940000155602 ENSGT00940000155784.C.u.b.a #20 ENSGT00940000155113.a.a.b.a.a #22 ENSGT00550000074698.a.a ENSGT00940000155784.C.u.b.b #20 ENSGT00940000155113.a.a.b.a.b #22 ENSGT00550000074698.b ENSGT00530000063461.A.b.c ENSGT00510000047245.ob.a ENSGT00500000044921.a ENSGT01100000263547.a.b.b.b.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000159017.a.b.a.a ENSGT00500000045044.g ENSGT00390000018500.b.b.b.b ENSGT00390000013823.a ENSGT00950000182908.C.a.j.a.b ENSGT01030000234592.A.a.b.c.a.b.b ENSGT01030000234592.A.a.b.c.a.b.a.b.a ENSGT00950000182856.a.a.a.q ENSGT00940000166341.u.a ENSGT00940000163428.b.a.j.a Goldfish MODERN SPECIES 38 sema6d (ENSCARG00000032391) ENSCARG00000032447 ENSCARG00000032455 ENSCARG00000032464 ENSCARG00000032469 ENSCARG00000032487 glmp (ENSCARG00000032505) ENSCARG00000032515 eomesa (ENSCARG00000032530) ENSCARG00000032544 TGFBR2 (ENSCARG00000032564) ENSCARG00000032632 ENSCARG00000032637 lrrc3b (ENSCARG00000032644) DENND3 (ENSCARG00000032651) #20 PTK2 (ENSCARG00000032795) #22 rplp1 (ENSCARG00000035331) clptm1l (ENSCARG00000035341) snrpd1 (ENSCARG00000035461) ggcta (ENSCARG00000035468) ENSCARG00000035484 znrf2a (ENSCARG00000035502) mturn (ENSCARG00000035518) SH3BP5 (ENSCARG00000035531) btd (ENSCARG00000035550) ENSCARG00000035557 ENSCARG00000035570 TGFBR2 (ENSCARG00000035583) ENSCARG00000035715 ENSCARG00000035738 ENSCARG00000035763 Cyprininae_a ANCESTRAL SPECIES 80 ENSGT00940000159459.db.b ENSGT00940000160576.l ENSGT00390000014107.a.b.ab ENSGT01100000263531.A.j.a ENSGT00940000160042.a.a ENSGT00940000154491.c.a.b.b ENSGT00390000014944.b.a ENSGT00950000183081.b.i.b.c ENSGT00390000004554.k.b ENSGT00940000157768.a ENSGT00940000166193.b ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b.d #16 ENSGT00940000157780.rb.b ENSGT00940000155784.C.u.b.b #20 ENSGT00940000155113.a.a.b.a.b #22 ENSGT00550000074698.a.b ENSGT00530000063461.A.b.c ENSGT00510000047245.ob.a ENSGT00500000044921.a ENSGT01100000263547.a.b.b.b.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000159017.a.b.a.a ENSGT00500000045044.g ENSGT00390000018500.b.b.b.b ENSGT00390000013823.a.i ENSGT00950000182908.C.a.j.a.b ENSGT01030000234592.A.a.b.c.a.b.b ENSGT01030000234592.A.a.b.c.a.b.a.b.a ENSGT00950000182856.a.a.a.q ENSGT00940000166341.u.a ENSGT00940000163428.b.a.j.a Common carp reference MODERN SPECIES 31 ehmt2 (ENSCCRG00000006702) ENSCCRG00000067978 ENSCCRG00000052800 slc44a4 (ENSCCRG00000031086) ENSCCRG00000021130 scrt1a (ENSCCRG00000079030) zgc:63863 (ENSCCRG00000034677) dgat1a (ENSCCRG00000064682) cfap20 (ENSCCRG00000054535) ENSCCRG00000058852 ENSCCRG00000001552 ENSCCRG00000001527 #15 SLC45A4 (ENSCCRG00000001335) #16 lrrc3b (ENSCCRG00000072455) ENSCCRG00000058615 #20 ENSCCRG00000027891 #22 ENSCCRG00000060945 snrpd1 (ENSCCRG00000027883) clptm1l (ENSCCRG00000005615) ggcta (ENSCCRG00000067420) ENSCCRG00000073978 ENSCCRG00000061212 znrf2a (ENSCCRG00000058021) btd (ENSCCRG00000041725) ENSCCRG00000014678 ENSCCRG00000014651 ENSCCRG00000082489 SNX13 (ENSCCRG00000064645) ENSCCRG00000030173 twist1a (ENSCCRG00000030178) FERD3L (ENSCCRG00000030181) Golden-line barbel MODERN SPECIES 695 ENSSGRG00000010616 GPR20 (ENSSGRG00000010619) #15 SLC45A4 (ENSSGRG00000010620) #16 lrrc3b (ENSSGRG00000010642) klhl7 (ENSSGRG00000010647) ENSSGRG00000010650 #20 ENSSGRG00000010651 #20 ENSSGRG00000010665 #22 rplp1 (ENSSGRG00000010876) clptm1l (ENSSGRG00000010877) snrpd1 (ENSSGRG00000010881) ENSSGRG00000010882 znrf2a (ENSSGRG00000010884) ENSSGRG00000010885 mturn (ENSSGRG00000010886) SH3BP5 (ENSSGRG00000010887) ENSSGRG00000010909 btd (ENSSGRG00000010910) ANKRD28 (ENSSGRG00000010912) ENSSGRG00000011007 Cyprininae ANCESTRAL SPECIES ENSGT00940000155113.a.a.b.b #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000155113.a.a.b.b #22 Golden-line barbel MODERN SPECIES 4654 ENSSGRG00000003559 #22 Euteleosteomorpha ANCESTRAL SPECIES 47 ENSGT00940000163790 ENSGT00390000016546 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000166193 ENSGT00950000182914.a.a.a.c.b #16 ENSGT01030000235399 ENSGT00940000157893 ENSGT01040000240444.B.a #15 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000163549 ENSGT00940000161897.b.a ENSGT00390000018422 ENSGT00940000163790 ENSGT00390000016546 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00940000166193 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00980000199189.d ENSGT00980000199189.c ENSGT00530000063461.A.b ENSGT00940000155549.a.a.b ENSGT00940000157893.c.a ENSGT00390000014398 ENSGT00550000074870.y.b ENSGT00910000144277.f.b Northern pike MODERN SPECIES 9 hgh1 (ENSELUG00000022164) RECQL4 (ENSELUG00000022177) ENSELUG00000022216 scrt1a (ENSELUG00000022228) zgc:63863 (ENSELUG00000022243) dgat1a (ENSELUG00000022309) cfap20 (ENSELUG00000022376) ENSELUG00000025372 ENSELUG00000032134 ENSELUG00000030175 ENSELUG00000022550 ENSELUG00000029394 GPR20 (ENSELUG00000022571) #15 SLC45A4 (ENSELUG00000022641) #16 DENND3 (ENSELUG00000022669) #20 PTK2 (ENSELUG00000022774) #22 rplp1 (ENSELUG00000030035) ENSELUG00000022792 clptm1l (ENSELUG00000022866) CSMD3 (ENSELUG00000023030) ENSELUG00000034103 trps1 (ENSELUG00000023061) wdyhv1 (ENSELUG00000023170) psma2 (ENSELUG00000023135) ENSELUG00000000986 ENSELUG00000023182 rpa3 (ENSELUG00000023203) ENSELUG00000027618 glcci1a (ENSELUG00000023235) phf14 (ENSELUG00000023248) nxph1 (ENSELUG00000023269) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 524 ENSGT00940000155113.a.a.c.a #22 ENSGT00550000074698.c.a ENSGT00980000199189.c ENSGT00530000063461.A.b.a ENSGT00940000155549.a.a.b ENSGT00390000014398 ENSGT00550000074870.y.b.a ENSGT00910000144277.f.b.b ENSGT00990000212686 ENSGT00940000157751 ENSGT00940000156338.b.c ENSGT01090000260268.B ENSGT01060000251440 ENSGT00940000154450.tc.b ENSGT00940000158787.h.b ENSGT01090000260070.C.b.c Salmoninae_a ANCESTRAL SPECIES 28 ENSGT00940000163549.h ENSGT00940000161897.b.a.c ENSGT00390000018422.e ENSGT01020000232004 ENSGT00390000016546.j ENSGT00940000160387.d ENSGT00940000160042.d.a ENSGT00940000154491.c.a.b.c ENSGT00390000014944.b.c ENSGT00950000183081.b.i.b.e ENSGT00390000004554.m ENSGT00940000165466.d ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b.a #16 ENSGT00940000155784.C.u.b.d #20 ENSGT00940000155113.a.a.c.a #22 ENSGT00550000074698.c.a ENSGT00980000199189.c ENSGT00530000063461.A.b.a ENSGT00940000157893.c.b ENSGT00390000014398 ENSGT00550000074870.y.b.a ENSGT00910000144277.f.b.b ENSGT00990000212686 ENSGT00940000157751 ENSGT00940000156338.b.c ENSGT01090000260268.B ENSGT01060000251440 ENSGT00940000154450.tc.b ENSGT00940000158787.h.b ENSGT01090000260070.C.b.c Oncorhynchus ANCESTRAL SPECIES 29 ENSGT01060000248801.d.a ENSGT00940000163549.h ENSGT00940000161897.b.a.c ENSGT00390000018422.e ENSGT00390000016546.j ENSGT00940000160387.d ENSGT00940000160042.d.a ENSGT00940000154491.c.a.b.c ENSGT00390000014944.b.c ENSGT00950000183081.b.i.b.e ENSGT00390000004554.m ENSGT00940000165466.d ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b.a #16 ENSGT00940000155784.C.u.b.d #20 ENSGT00940000155113.a.a.c.a #22 ENSGT00550000074698.c.a ENSGT00980000199189.c ENSGT00530000063461.A.b.a ENSGT00940000157893.c.b ENSGT00390000014398 ENSGT00550000074870.y.b.a ENSGT00910000144277.f.b.b ENSGT00990000212686 ENSGT00940000157751 ENSGT01060000251440 ENSGT00940000154450.tc.b ENSGT00940000158787.h.b ENSGT01090000260070.C.b.c ENSGT00390000017974.ob.e ENSGT00950000183028.a.b.b.e Oncorhynchus_a ANCESTRAL SPECIES 29 ENSGT01060000248801.d.a ENSGT00940000163549.h ENSGT00940000161897.b.a.c ENSGT00390000018422.e ENSGT00390000016546.j ENSGT00940000160387.d ENSGT00940000160042.d.a ENSGT00940000154491.c.a.b.c ENSGT00390000014944.b.c ENSGT00950000183081.b.i.b.e ENSGT00390000004554.m ENSGT00940000165466.d ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b.a #16 ENSGT00940000155784.C.u.b.d #20 ENSGT00940000155113.a.a.c.a #22 ENSGT00550000074698.c.a ENSGT00980000199189.c ENSGT00530000063461.A.b.a ENSGT00940000155549.a.a.a.b ENSGT00950000182901 ENSGT00940000157893.c.b ENSGT00390000014398 ENSGT00550000074870.y.b.a.a ENSGT00910000144277.f.b.b ENSGT00990000212686 ENSGT00940000157751 ENSGT01010000222294.c.b.b.b.c.a.a.b.b.b ENSGT01060000251440 ENSGT00940000154450.tc.b ENSGT00940000158787.h.b Coho salmon MODERN SPECIES 8 ENSOKIG00005017294 hsf1 (ENSOKIG00005017234) scxa (ENSOKIG00005017210) bop1 (ENSOKIG00005016763) hgh1 (ENSOKIG00005016743) ENSOKIG00005016515 ENSOKIG00005016485 scrt1a (ENSOKIG00005016473) zgc:63863 (ENSOKIG00005016455) dgat1a (ENSOKIG00005016352) cfap20 (ENSOKIG00005016327) ENSOKIG00005016278 GPR20 (ENSOKIG00005016262) #15 SLC45A4 (ENSOKIG00005016252) #16 DENND3 (ENSOKIG00005015900) #20 PTK2 (ENSOKIG00005012789) #22 rplp1 (ENSOKIG00005012592) clptm1l (ENSOKIG00005012492) ENSOKIG00005012473 CSMD3 (ENSOKIG00005011985) ENSOKIG00005011901 ENSOKIG00005011883 ENSOKIG00005011874 TRPS1 (ENSOKIG00005011868) wdyhv1 (ENSOKIG00005011861) PSMA2 (ENSOKIG00005011832) SDHA (ENSOKIG00005011241) ENSOKIG00005011197 KDM1B (ENSOKIG00005008784) ENSOKIG00005008619 ENSOKIG00005008596 Chinook salmon MODERN SPECIES 2912 ENSOTSG00005022992 INTS1 (ENSOTSG00005023000) mafk (ENSOTSG00005023052) tmem184a (ENSOTSG00005023054) psmg3 (ENSOTSG00005023314) ELFN1 (ENSOTSG00005023316) MRM2 (ENSOTSG00005023318) nudt1 (ENSOTSG00005023319) snx8a (ENSOTSG00005023321) TTYH3 (ENSOTSG00005023335) lfng (ENSOTSG00005024797) rps11 (ENSOTSG00005024800) baxa (ENSOTSG00005024806) ENSOTSG00005024807 ENSOTSG00005024810 #20 ENSOTSG00005024811 #22 rplp1 (ENSOTSG00005025319) ENSOTSG00005025320 clptm1l (ENSOTSG00005025325) Rainbow trout MODERN SPECIES 9 ENSOMYG00000012333 scxa (ENSOMYG00000012410) ENSOMYG00000075875 hgh1 (ENSOMYG00000012414) ENSOMYG00000012427 ENSOMYG00000012539 scrt1a (ENSOMYG00000012556) zgc:63863 (ENSOMYG00000056183) dgat1a (ENSOMYG00000012689) cfap20 (ENSOMYG00000061656) ENSOMYG00000013054 ENSOMYG00000013064 #15 SLC45A4 (ENSOMYG00000013075) #16 ENSOMYG00000056957 ENSOMYG00000013127 #20 ENSOMYG00000013627 #22 rplp1 (ENSOMYG00000014416) ENSOMYG00000014543 clptm1l (ENSOMYG00000014448) ENSOMYG00000076262 ENSOMYG00000014714 ENSOMYG00000015210 ENSOMYG00000015231 ENSOMYG00000075620 ENSOMYG00000048139 ENSOMYG00000052675 ENSOMYG00000034716 ENSOMYG00000034739 ENSOMYG00000034814 ENSOMYG00000035537 ENSOMYG00000038115 Salmo ANCESTRAL SPECIES 2 ENSGT00940000163549.h ENSGT00940000161897.b.a.c ENSGT00390000018422.e ENSGT00940000163790.b ENSGT00390000016546.j ENSGT00940000160387.d ENSGT00940000160042.d.a ENSGT00940000154491.c.a.b.c ENSGT00390000014944.b.c ENSGT00950000183081.b.i.b.e ENSGT00390000004554.m ENSGT00940000165466.d ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b.a #16 ENSGT00940000155784.C.u.b.d #20 ENSGT00940000155113.a.a.c.a #22 ENSGT00550000074698.c.a ENSGT00530000063461.A.b.a ENSGT00940000155549.a.a.a.b ENSGT00940000157893.c.b ENSGT00390000014398 ENSGT00550000074870.z ENSGT00910000144277.f.b.b ENSGT00990000212686 ENSGT00940000157751 ENSGT00940000156338.b.c ENSGT01090000260268.B ENSGT01060000251440 ENSGT00940000154450.tc.b ENSGT00940000158787.h.b ENSGT01090000260070.C.b.c River trout MODERN SPECIES 27 hsf1 (ENSSTUG00000043691) bop1 (ENSSTUG00000043797) scxa (ENSSTUG00000044441) ENSSTUG00000044447 hgh1 (ENSSTUG00000044451) ENSSTUG00000044469 ENSSTUG00000044595 scrt1a (ENSSTUG00000044612) zgc:63863 (ENSSTUG00000044624) dgat1a (ENSSTUG00000044716) cfap20 (ENSSTUG00000045602) ENSSTUG00000045628 ENSSTUG00000045659 #15 SLC45A4 (ENSSTUG00000045673) #16 DENND3 (ENSSTUG00000045698) #20 PTK2 (ENSSTUG00000046161) #22 rplp1 (ENSSTUG00000047603) clptm1l (ENSSTUG00000047613) CSMD3 (ENSSTUG00000047820) ENSSTUG00000049544 ENSSTUG00000049545 trps1 (ENSSTUG00000049546) ENSSTUG00000049547 wdyhv1 (ENSSTUG00000049549) ENSSTUG00000049554 sdha (ENSSTUG00000049562) ENSSTUG00000049646 KDM1B (ENSSTUG00000049671) ENSSTUG00000049820 ENSSTUG00000049824 srsf10b (ENSSTUG00000049827) Atlantic salmon MODERN SPECIES 19 bop1 (ENSSSAG00000021588) ENSSSAG00000023945 brp16 (ENSSSAG00000024112) ENSSSAG00000024550 ENSSSAG00000010796 ENSSSAG00000030027 ENSSSAG00000097421 scrt1a (ENSSSAG00000105690) zgc:63863 (ENSSSAG00000030357) dgat1a (ENSSSAG00000031001) cfap20 (ENSSSAG00000040578) ENSSSAG00000040608 ENSSSAG00000090489 #15 SLC45A4 (ENSSSAG00000040728) #16 dennd3 (ENSSSAG00000040784) #20 ENSSSAG00000041449 #22 ENSSSAG00000119383 rplp1 (ENSSSAG00000063156) clptm1l (ENSSSAG00000063184) ENSSSAG00000101872 ENSSSAG00000117801 ENSSSAG00000118533 ENSSSAG00000105504 ENSSSAG00000065020 ENSSSAG00000095756 ENSSSAG00000095425 PSA2 (ENSSSAG00000065065) sdha (ENSSSAG00000065157) ENSSSAG00000065391 ENSSSAG00000065417 ENSSSAG00000065537 Salmoninae ANCESTRAL SPECIES 780 ENSGT00970000197866 ENSGT00940000166193 ENSGT00950000182914.a.a.a.c.b.b #16 ENSGT00940000155784.C.u.b.c #20 ENSGT00940000155113.a.a.c.b #22 ENSGT00550000074698.c.b ENSGT00980000199189.d ENSGT00530000063461.A.b.b ENSGT00940000155549.a.a.a.a ENSGT00940000157893.c.a Huchen DUPLICATION Huchen MODERN SPECIES 6475 PTK2 (ENSHHUG00000001500) #22 Huchen DUPLICATION Huchen DUPLICATION Huchen MODERN SPECIES 5080 ENSHHUG00000050806 #22 ENSHHUG00000050805 #22 Huchen MODERN SPECIES 5080 ENSHHUG00000050806 #22 ENSHHUG00000050805 #22 Huchen MODERN SPECIES 1595 ENSHHUG00000033790 ENSHHUG00000033793 ENSHHUG00000033795 ENSHHUG00000033796 SLC45A4 (ENSHHUG00000033798) #16 DENND3 (ENSHHUG00000033856) #20 ENSHHUG00000033928 #22 Salmoninae_a ANCESTRAL SPECIES 5 ENSGT00940000161897.b.a.d ENSGT00390000018422.f ENSGT00940000163790.b ENSGT00940000163790.a ENSGT00390000016546.i ENSGT00940000160387.c ENSGT00940000160042.c ENSGT00940000160042.d.b ENSGT00940000154491.c.a.b.d ENSGT00390000014944.b.d ENSGT00950000183081.b.i.b.f ENSGT00390000004554.n ENSGT00940000166193 ENSGT00950000182914.a.a.a.c.b.b #16 ENSGT00940000155784.C.u.b.c #20 ENSGT00940000155113.a.a.c.b #22 ENSGT00550000074698.c.b ENSGT00980000199189.d ENSGT00530000063461.A.b.b ENSGT00940000155549.a.a.a.a ENSGT00940000157893.c.a ENSGT00990000213672 ENSGT00550000074870.y.b.b ENSGT00910000144277.f.b.a ENSGT00390000008818 ENSGT00940000164635 ENSGT00940000156215 ENSGT00940000159300 ENSGT00940000159104.d.d ENSGT00940000158587.c.a ENSGT00390000014274 Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00740000117011 ENSGT00940000163549.g ENSGT00940000161897.b.a.d ENSGT00390000018422.f ENSGT00940000163790.b ENSGT00940000163790.a ENSGT00390000016546.i ENSGT00940000160042.d.b ENSGT00940000154491.c.a.b.d ENSGT00390000014944.b.d ENSGT00950000183081.b.i.b.f ENSGT00390000004554.n ENSGT00940000166193 ENSGT00950000182914.a.a.a.c.b.b #16 ENSGT00940000155784.C.u.b.c #20 ENSGT00940000155113.a.a.c.b #22 ENSGT00550000074698.c.b ENSGT00980000199189.d ENSGT00530000063461.A.b.b ENSGT00940000155549.a.a.a.a ENSGT00940000157893.c.a ENSGT00990000213672 ENSGT00550000074870.y.b.b ENSGT00910000144277.f.b.a ENSGT00390000008818 ENSGT00940000164635 ENSGT00390000014274 ENSGT00940000156338.b.d ENSGT00940000159312.d ENSGT00940000164147.b ENSGT00940000154450.tc.a Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT01060000248801.d.b ENSGT00740000117011 ENSGT00940000163549.g ENSGT00940000161897.b.a.d ENSGT00390000018422.f ENSGT00940000163790.b ENSGT00390000016546.i ENSGT00940000160042.d.b ENSGT00940000154491.c.a.b.d ENSGT00390000014944.b.d ENSGT00950000183081.b.i.b.f ENSGT00390000004554.n ENSGT00940000166193 ENSGT00950000182914.a.a.a.c.b.b #16 ENSGT00940000155784.C.u.b.c #20 ENSGT00940000155113.a.a.c.b #22 ENSGT00550000074698.c.b ENSGT00980000199189.d ENSGT00530000063461.A.b.b ENSGT00940000155549.a.a.a.a ENSGT00940000157893.c.a ENSGT00550000074870.y.b.a.b ENSGT00910000144277.f.b.a ENSGT00390000014274 ENSGT00940000156338.b.d ENSGT00940000159312.d ENSGT00940000164147.b ENSGT00940000154450.tc.a ENSGT00990000212118 ENSGT00940000158787.h.a ENSGT01090000260070.C.b.d Chinook salmon MODERN SPECIES 24 ENSOTSG00005005679 ENSOTSG00005005681 hsf1 (ENSOTSG00005005683) bop1 (ENSOTSG00005005720) scxa (ENSOTSG00005005735) ENSOTSG00005005736 hgh1 (ENSOTSG00005005737) ENSOTSG00005005740 scrt1a (ENSOTSG00005005741) zgc:63863 (ENSOTSG00005005742) dgat1a (ENSOTSG00005005748) cfap20 (ENSOTSG00005005839) ENSOTSG00005005841 SLC45A4 (ENSOTSG00005005846) #16 ENSOTSG00005005849 #20 ENSOTSG00005005906 #22 rplp1 (ENSOTSG00005006091) ENSOTSG00005006092 clptm1l (ENSOTSG00005006095) CSMD3 (ENSOTSG00005006167) trps1 (ENSOTSG00005006357) ENSOTSG00005006358 sdha (ENSOTSG00005006359) ccdc127b (ENSOTSG00005006427) ENSOTSG00005006428 CFAP69 (ENSOTSG00005006429) slc9a1b (ENSOTSG00005006434) MAN1C1 (ENSOTSG00005006586) ENSOTSG00005006591 srsf10b (ENSOTSG00005006592) ENSOTSG00005006595 Coho salmon MODERN SPECIES 5 scxa (ENSOKIG00005008743) bop1 (ENSOKIG00005008679) ENSOKIG00005008660 ENSOKIG00005008648 hgh1 (ENSOKIG00005008592) ENSOKIG00005008584 ENSOKIG00005008552 scrt1a (ENSOKIG00005008533) ENSOKIG00005008524 zgc:63863 (ENSOKIG00005008440) dgat1a (ENSOKIG00005008229) cfap20 (ENSOKIG00005008188) ENSOKIG00005008078 SLC45A4 (ENSOKIG00005008063) #16 DENND3 (ENSOKIG00005007768) #20 PTK2 (ENSOKIG00005007332) #22 rplp1 (ENSOKIG00005007285) ENSOKIG00005007274 clptm1l (ENSOKIG00005006551) ENSOKIG00005006510 CSMD3 (ENSOKIG00005005950) ENSOKIG00005005840 trps1 (ENSOKIG00005005834) ENSOKIG00005005805 sdha (ENSOKIG00005005662) ccdc127b (ENSOKIG00005005635) ENSOKIG00005005629 CFAP69 (ENSOKIG00005005523) slc9a1b (ENSOKIG00005004498) MAN1C1 (ENSOKIG00005022347) ENSOKIG00005022330 Rainbow trout MODERN SPECIES 24 ENSOMYG00000073896 scxa (ENSOMYG00000017606) ENSOMYG00000053659 ENSOMYG00000017617 hgh1 (ENSOMYG00000017633) ENSOMYG00000075876 ENSOMYG00000017657 scrt1a (ENSOMYG00000065678) zgc:63863 (ENSOMYG00000049871) ENSOMYG00000068502 dgat1a (ENSOMYG00000017758) cfap20 (ENSOMYG00000018743) ENSOMYG00000018784 ENSOMYG00000018864 #16 ENSOMYG00000018981 #20 ENSOMYG00000019685 #22 rplp1 (ENSOMYG00000021164) ENSOMYG00000021170 ENSOMYG00000074552 clptm1l (ENSOMYG00000021358) ENSOMYG00000004197 ENSOMYG00000050767 ENSOMYG00000005216 ENSOMYG00000063231 ENSOMYG00000056482 ENSOMYG00000005230 ENSOMYG00000005522 ENSOMYG00000000281 ENSOMYG00000006505 ENSOMYG00000006584 slc9a1b (ENSOMYG00000007199) Salmo ANCESTRAL SPECIES 2 ENSGT00940000163549.g ENSGT00940000161897.b.a.d ENSGT00390000018422.f ENSGT00940000163790.a ENSGT00390000016546.i ENSGT00940000160387.c ENSGT00940000160042.c ENSGT00940000160042.d.b ENSGT00940000154491.c.a.b.d ENSGT00390000014944.b.d ENSGT00950000183081.b.i.b.f ENSGT00390000004554.n ENSGT00940000166193 ENSGT00950000182914.a.a.a.c.b.b #16 ENSGT00940000155784.C.u.b.c #20 ENSGT00940000155113.a.a.c.b #22 ENSGT00550000074698.c.b ENSGT00980000199189.d ENSGT00530000063461.A.b.b ENSGT00940000155549.a.a.a.a ENSGT00940000157893.c.a ENSGT00990000213672 ENSGT00550000074870.y.b.b ENSGT00910000144277.f.b.a ENSGT00390000014274 ENSGT00940000156338.b.d ENSGT00940000159312.d ENSGT00940000164147.b ENSGT00940000154450.tc.a ENSGT00990000212118 ENSGT00940000158787.h.a Atlantic salmon MODERN SPECIES 5 bop1 (ENSSSAG00000047288) ENSSSAG00000047261 hgh1 (ENSSSAG00000047259) ENSSSAG00000047602 ENSSSAG00000047250 scrt1a (ENSSSAG00000092655) ENSSSAG00000121008 zgc:63863 (ENSSSAG00000047196) dgat1a (ENSSSAG00000047100) cfap20 (ENSSSAG00000047067) ENSSSAG00000046974 ENSSSAG00000046960 #16 ENSSSAG00000104635 ENSSSAG00000046861 #20 ENSSSAG00000102250 ENSSSAG00000044281 #22 ENSSSAG00000044191 ENSSSAG00000044178 clptm1l (ENSSSAG00000043766) ENSSSAG00000109734 ENSSSAG00000090735 ENSSSAG00000038648 ENSSSAG00000084152 ENSSSAG00000109998 ENSSSAG00000029270 ENSSSAG00000029022 PSA2 (ENSSSAG00000026601) ENSSSAG00000020652 ccdc127 (ENSSSAG00000020001) ENSSSAG00000018117 slc9a1b (ENSSSAG00000017046) River trout MODERN SPECIES 29 ENSSTUG00000047750 hsf1 (ENSSTUG00000047759) bop1 (ENSSTUG00000047856) scxa (ENSSTUG00000047891) ENSSTUG00000047895 hgh1 (ENSSTUG00000047903) ENSSTUG00000047907 slc39a4 (ENSSTUG00000047919) scrt1a (ENSSTUG00000047928) zgc:63863 (ENSSTUG00000047934) dgat1a (ENSSTUG00000047985) cfap20 (ENSSTUG00000048157) ENSSTUG00000048167 SLC45A4 (ENSSTUG00000048200) #16 DENND3 (ENSSTUG00000048214) #20 PTK2 (ENSSTUG00000048354) #22 rplp1 (ENSSTUG00000048731) ENSSTUG00000048735 clptm1l (ENSSTUG00000048744) CSMD3 (ENSSTUG00000048969) ENSSTUG00000037753 trps1 (ENSSTUG00000037773) ENSSTUG00000037783 ENSSTUG00000037835 sdha (ENSSTUG00000037969) ccdc127b (ENSSTUG00000038676) CFAP69 (ENSSTUG00000038689) slc9a1b (ENSSTUG00000038794) MAN1C1 (ENSSTUG00000039533) ENSSTUG00000039655 srsf10b (ENSSTUG00000039664) Salmoninae ANCESTRAL SPECIES 1454 ENSGT00970000197016.b ENSGT00940000155113.a.a.d #22 ENSGT00970000197016.a Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155113.a.a.d #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000155113.a.a.d #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000155113.a.a.d #22 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 1035 ENSOTSG00005039982 #22 ENSOTSG00005039983 ##22 ENSOTSG00005039990 Chinook salmon MODERN SPECIES 147 ENSOTSG00005028931 #22 ENSOTSG00005028930 Huchen DUPLICATION Huchen MODERN SPECIES 3790 ENSHHUG00000042513 ENSHHUG00000042503 #22 rplp1 (ENSHHUG00000042499) clptm1l (ENSHHUG00000042413) ENSHHUG00000042397 Huchen MODERN SPECIES 6838 ENSHHUG00000006029 ##22 ENSHHUG00000006027 #22 Huchen MODERN SPECIES 8049 ENSHHUG00000023282 #22 ENSHHUG00000023277 Acanthomorphata ANCESTRAL SPECIES 22 ENSGT00730000110871.a.a.a.a ENSGT00730000110871.b ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Cod MODERN SPECIES 14 ENSGMOG00000011366 ENSGMOG00000011329 ENSGMOG00000027353 ENSGMOG00000001186 ENSGMOG00000023867 ENSGMOG00000001340 ENSGMOG00000029940 ENSGMOG00000013833 zgc:63863 (ENSGMOG00000009822) ENSGMOG00000036473 dgat1a (ENSGMOG00000016836) cfap20 (ENSGMOG00000016832) ENSGMOG00000029829 #15 ENSGMOG00000034931 #16 ENSGMOG00000016795 #20 ENSGMOG00000022786 #22 ENSGMOG00000031213 ENSGMOG00000003124 ENSGMOG00000007072 ENSGMOG00000002786 ENSGMOG00000029802 ENSGMOG00000035253 ENSGMOG00000023748 ENSGMOG00000002665 ENSGMOG00000002645 ENSGMOG00000002639 ENSGMOG00000002589 ENSGMOG00000002565 ENSGMOG00000002532 ENSGMOG00000002519 ENSGMOG00000002496 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00730000110871.a.a.a.a ENSGT00730000110871.b ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Pinecone sodierfish MODERN SPECIES 2 cyp51 (ENSMMDG00005002249) ENSMMDG00005002335 ENSMMDG00005002340 MTERF1 (ENSMMDG00005002342) dus3l (ENSMMDG00005002348) ENSMMDG00005002398 cndp2 (ENSMMDG00005002406) RECQL4 (ENSMMDG00005002687) ENSMMDG00005002714 SCRT1 (ENSMMDG00005002733) zgc:63863 (ENSMMDG00005002744) dgat1a (ENSMMDG00005002759) cfap20 (ENSMMDG00005002784) SLC45A4 (ENSMMDG00005002814) #16 DENND3 (ENSMMDG00005002895) #20 PTK2 (ENSMMDG00005003089) #22 rplp1 (ENSMMDG00005003107) clptm1l (ENSMMDG00005003160) trps1 (ENSMMDG00005003403) CSMD3 (ENSMMDG00005003424) tshz1 (ENSMMDG00005004041) znf516 (ENSMMDG00005004049) ENSMMDG00005004053 SYNGAP1 (ENSMMDG00005004075) vps72a (ENSMMDG00005004101) lingo4a (ENSMMDG00005004108) ctss1 (ENSMMDG00005004164) ENSMMDG00005005316 SV2A (ENSMMDG00005005325) sf3b4 (ENSMMDG00005005330) LIX1L (ENSMMDG00005005334) Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00730000110871.a.a.a.a ENSGT00730000110871.b ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Tiger tail seahorse MODERN SPECIES 99 ENSHCOG00000016279 dgat1a (ENSHCOG00000016223) zgc:63863 (ENSHCOG00000016208) SCRT1 (ENSHCOG00000016179) ENSHCOG00000016163 RECQL4 (ENSHCOG00000016157) cndp2 (ENSHCOG00000016143) ENSHCOG00000016129 dus3l (ENSHCOG00000016072) MTERF1 (ENSHCOG00000016064) ENSHCOG00000016056 cyp51 (ENSHCOG00000015902) krit1 (ENSHCOG00000015896) rpz2 (ENSHCOG00000000442) si:dkey-266f7.9 (ENSHCOG00000015848) PTK2 (ENSHCOG00000015835) #22 rplp1 (ENSHCOG00000015713) clptm1l (ENSHCOG00000015698) trps1 (ENSHCOG00000015687) ENSHCOG00000015654 ENSHCOG00000015638 ENSHCOG00000015631 ENSHCOG00000015615 ENSHCOG00000015574 tshz1 (ENSHCOG00000015516) DNAH17 (ENSHCOG00000015509) ENSHCOG00000015351 ENSHCOG00000015339 ENSHCOG00000015331 maff (ENSHCOG00000000426) tomm22 (ENSHCOG00000015307) Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Ovalentaria ANCESTRAL SPECIES 12 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Oryzias DUPLICATION Oryzias ANCESTRAL SPECIES ENSGT00940000155113.a.a.e #22 Oryzias_a ANCESTRAL SPECIES ENSGT00940000155113.a.a.e #22 Chinese medaka MODERN SPECIES 5199 ENSOSIG00000004049 #22 Oryzias ANCESTRAL SPECIES 24 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000178701 ENSGT00530000063461.A.b ENSGT00950000182914.a.a.a.d #16 ENSGT00940000155784.C.v #20 ENSGT00940000155113.a.a.f #22 ENSGT00970000197016 Oryzias_a ANCESTRAL SPECIES ENSGT00940000155113.a.a.f #22 Chinese medaka MODERN SPECIES 2947 ENSOSIG00000003138 #22 Oryzias_b ANCESTRAL SPECIES 31 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00530000063461.A.b ENSGT00950000182914.a.a.a.d #16 ENSGT00940000155784.C.v #20 ENSGT00940000155113.a.a.f #22 ENSGT00970000197016 Javanese ricefish MODERN SPECIES 2 prcc (ENSOJAG00000003176) mrpl9 (ENSOJAG00000003161) si:dkey-266f7.9 (ENSOJAG00000003158) rpz2 (ENSOJAG00000003151) cyp51 (ENSOJAG00000002990) ENSOJAG00000002903 MTERF1 (ENSOJAG00000002892) dus3l (ENSOJAG00000002869) ENSOJAG00000002710 SCRT1 (ENSOJAG00000002702) zgc:63863 (ENSOJAG00000002688) cfap20 (ENSOJAG00000002594) GPR20 (ENSOJAG00000002588) #15 ENSOJAG00000002574 #16 ENSOJAG00000002570 #20 PTK2 (ENSOJAG00000002123) #22 ENSOJAG00000002025 tmem79a (ENSOJAG00000001928) ENSOJAG00000001917 znf687b (ENSOJAG00000001900) psmd4a (ENSOJAG00000001863) ENSOJAG00000001849 ENSOJAG00000001838 ndufv1 (ENSOJAG00000001689) ENSOJAG00000001647 aqp10b (ENSOJAG00000007966) hax1 (ENSOJAG00000007932) ubap2l (ENSOJAG00000006692) C1orf43 (ENSOJAG00000006537) ENSOJAG00000006375 s100s (ENSOJAG00000006354) Indian medaka DUPLICATION Indian medaka MODERN SPECIES 221 ENSOMEG00000000286 zgc:63863 (ENSOMEG00000011907) dgat1a (ENSOMEG00000011981) cfap20 (ENSOMEG00000012030) GPR20 (ENSOMEG00000012061) #15 SLC45A4 (ENSOMEG00000012086) #16 DENND3 (ENSOMEG00000012121) #20 ENSOMEG00000012130 ENSOMEG00000012139 #22 ENSOMEG00000012150 ENSOMEG00000012164 #22 ENSOMEG00000012182 clptm1l (ENSOMEG00000000310) Indian medaka MODERN SPECIES 221 ENSOMEG00000000286 zgc:63863 (ENSOMEG00000011907) dgat1a (ENSOMEG00000011981) cfap20 (ENSOMEG00000012030) GPR20 (ENSOMEG00000012061) #15 SLC45A4 (ENSOMEG00000012086) #16 DENND3 (ENSOMEG00000012121) #20 ENSOMEG00000012130 ENSOMEG00000012139 #22 ENSOMEG00000012150 ENSOMEG00000012164 #22 ENSOMEG00000012182 clptm1l (ENSOMEG00000000310) Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a ENSGT00940000160311.a.b ENSGT01090000260040.b.b.a.c.a Turquoise killifish MODERN SPECIES 1628 MTERF1 (ENSNFUG00015022166) dus3l (ENSNFUG00015021851) ENSNFUG00015021838 cndp2 (ENSNFUG00015021804) RECQL4 (ENSNFUG00015021784) SLC39A4 (ENSNFUG00015021780) ENSNFUG00015021778 SCRT1 (ENSNFUG00015021772) Nfu_g_1_004128 (ENSNFUG00015021764) DGAT1A (ENSNFUG00015021711) ENSNFUG00015021704 ENSNFUG00015021692 #15 SLC45A4 (ENSNFUG00015021684) #16 DENND3 (ENSNFUG00015021646) #20 ENSNFUG00015021639 PTK2 (ENSNFUG00015020854) #22 cks1b (ENSNFUG00015020789) EFNA3A (ENSNFUG00015020786) efna1a (ENSNFUG00015020784) dpm3 (ENSNFUG00015020781) trim46b (ENSNFUG00015020774) ENSNFUG00015020771 S100A2 (ENSNFUG00015020767) SNX27A (ENSNFUG00015020015) Nfu_g_1_017837 (ENSNFUG00015019925) ENSNFUG00015019877 ENSNFUG00015019823 cers2a (ENSNFUG00015019804) celf3a (ENSNFUG00015019695) RPRD2A (ENSNFUG00015019643) C19H1ORF51 (ENSNFUG00015019628) Mangrove rivulus MODERN SPECIES 2 ENSKMAG00000009757 MTERF1 (ENSKMAG00000009695) dus3l (ENSKMAG00000009675) ENSKMAG00000009653 cndp2 (ENSKMAG00000009618) ENSKMAG00000009537 ENSKMAG00000009503 ENSKMAG00000009489 KLHL10 (ENSKMAG00000009467) zgc:63863 (ENSKMAG00000009431) dgat1a (ENSKMAG00000009340) cfap20 (ENSKMAG00000009297) cfap20 (ENSKMAG00000009263) SLC45A4 (ENSKMAG00000009242) #16 DENND3 (ENSKMAG00000009201) #20 PTK2 (ENSKMAG00000009027) #22 rplp1 (ENSKMAG00000008998) clptm1l (ENSKMAG00000008913) trps1 (ENSKMAG00000008869) CSMD3 (ENSKMAG00000008620) tshz1 (ENSKMAG00000008580) ENSKMAG00000008571 SYNGAP1 (ENSKMAG00000008440) vps72a (ENSKMAG00000008394) lingo4a (ENSKMAG00000008371) ENSKMAG00000008316 ctss1 (ENSKMAG00000008257) SV2A (ENSKMAG00000008186) sf3b4 (ENSKMAG00000008154) LIX1L (ENSKMAG00000008131) pabpc1b (ENSKMAG00000008049) Cyprinodontoidei ANCESTRAL SPECIES 11 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500.j ENSGT00940000156500.i ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a NAME_4 ANCESTRAL SPECIES 10 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500.j ENSGT00940000156500.i ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Sheepshead minnow MODERN SPECIES 715 ENSCVAG00000003230 SCRT1 (ENSCVAG00000003190) zgc:63863 (ENSCVAG00000003183) dgat1a (ENSCVAG00000003163) cfap20 (ENSCVAG00000003148) SLC45A4 (ENSCVAG00000003130) #16 DENND3 (ENSCVAG00000003077) #20 PTK2 (ENSCVAG00000003044) #22 rplp1 (ENSCVAG00000002940) clptm1l (ENSCVAG00000002933) Mummichog MODERN SPECIES 2348 MTERF1 (ENSFHEG00000000224) dus3l (ENSFHEG00000010091) ENSFHEG00000010012 cndp2 (ENSFHEG00000010005) cndp2 (ENSFHEG00000009872) RECQL4 (ENSFHEG00000009855) slc39a4 (ENSFHEG00000009832) SCRT1 (ENSFHEG00000009794) zgc:63863 (ENSFHEG00000009773) dgat1a (ENSFHEG00000009713) cfap20 (ENSFHEG00000009610) GPR20 (ENSFHEG00000009588) #15 SLC45A4 (ENSFHEG00000009569) #16 ENSFHEG00000009492 #20 DENND3 (ENSFHEG00000000219) #20 PTK2 (ENSFHEG00000009427) #22 rplp1 (ENSFHEG00000008862) clptm1l (ENSFHEG00000008826) trps1 (ENSFHEG00000008678) CSMD3 (ENSFHEG00000008655) tshz1 (ENSFHEG00000008423) znf516 (ENSFHEG00000008408) ENSFHEG00000008394 ENSFHEG00000008377 vps72a (ENSFHEG00000008307) ENSFHEG00000008289 ctss1 (ENSFHEG00000008270) ENSFHEG00000008248 SV2A (ENSFHEG00000008239) sf3b4 (ENSFHEG00000008211) ENSFHEG00000008168 Poeciliinae ANCESTRAL SPECIES 18 ENSGT00930000151026 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000156500.j ENSGT00940000156500.i ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Platyfish MODERN SPECIES 4 cyp51 (ENSXMAG00000015173) ENSXMAG00000015218 ENSXMAG00000029166 ENSXMAG00000029672 dus3l (ENSXMAG00000015252) cndp2 (ENSXMAG00000015266) ENSXMAG00000015315 ENSXMAG00000015339 SCRT1 (ENSXMAG00000015353) zgc:63863 (ENSXMAG00000015355) dgat1a (ENSXMAG00000015366) cfap20 (ENSXMAG00000015399) GPR20 (ENSXMAG00000015403) #15 SLC45A4 (ENSXMAG00000015412) #16 DENND3 (ENSXMAG00000015472) #20 PTK2 (ENSXMAG00000015476) #22 rplp1 (ENSXMAG00000015532) clptm1l (ENSXMAG00000015553) trps1 (ENSXMAG00000015559) CSMD3 (ENSXMAG00000015566) tshz1 (ENSXMAG00000023230) znf516 (ENSXMAG00000028251) ENSXMAG00000015639 SYNGAP1 (ENSXMAG00000003807) vps72a (ENSXMAG00000003802) lingo4a (ENSXMAG00000020336) ctss1 (ENSXMAG00000003801) ENSXMAG00000003793 SV2A (ENSXMAG00000003782) sf3b4 (ENSXMAG00000003772) LIX1L (ENSXMAG00000003769) Poecilia ANCESTRAL SPECIES 24 ENSGT00930000151026 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000156500.j ENSGT00940000156500.i ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a ENSGT00760000119766 Guppy MODERN SPECIES 441 ENSPREG00000012377 MTERF1 (ENSPREG00000012369) dus3l (ENSPREG00000012315) cndp2 (ENSPREG00000012281) cndp2 (ENSPREG00000012256) ENSPREG00000012196 slc39a4 (ENSPREG00000012173) ENSPREG00000012166 ENSPREG00000012153 zgc:63863 (ENSPREG00000012136) dgat1a (ENSPREG00000012064) cfap20 (ENSPREG00000012033) ENSPREG00000012010 #15 SLC45A4 (ENSPREG00000011989) #16 DENND3 (ENSPREG00000011896) #20 PTK2 (ENSPREG00000011683) #22 rplp1 (ENSPREG00000011579) clptm1l (ENSPREG00000011507) trps1 (ENSPREG00000011468) CSMD3 (ENSPREG00000011344) tshz1 (ENSPREG00000011305) znf516 (ENSPREG00000011296) ENSPREG00000011286 SYNGAP1 (ENSPREG00000011216) vps72a (ENSPREG00000011189) lingo4a (ENSPREG00000011184) ctss1 (ENSPREG00000011168) SV2A (ENSPREG00000011109) sf3b4 (ENSPREG00000011076) lix1l (ENSPREG00000011018) ENSPREG00000010984 NAME_6 ANCESTRAL SPECIES 171 ENSGT00530000063721.A ENSGT00930000151026 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000156500.j ENSGT00940000156500.i ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 Amazon molly MODERN SPECIES 419 krit1 (ENSPFOG00000007240) cyp51 (ENSPFOG00000007109) ENSPFOG00000006927 MTERF1 (ENSPFOG00000006919) dus3l (ENSPFOG00000006750) cndp2 (ENSPFOG00000006653) cndp2 (ENSPFOG00000006107) ENSPFOG00000005814 ENSPFOG00000005641 SCRT1 (ENSPFOG00000005616) zgc:63863 (ENSPFOG00000005444) dgat1a (ENSPFOG00000005252) cfap20 (ENSPFOG00000005171) SLC45A4 (ENSPFOG00000004858) #16 DENND3 (ENSPFOG00000004408) #20 PTK2 (ENSPFOG00000003397) #22 rplp1 (ENSPFOG00000003310) clptm1l (ENSPFOG00000003009) trps1 (ENSPFOG00000002852) ENSPFOG00000002808 Sailfin molly DUPLICATION Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 49 ENSPLAG00000011562 MTERF1 (ENSPLAG00000011584) dus3l (ENSPLAG00000011636) cndp2 (ENSPLAG00000011675) cndp2 (ENSPLAG00000011693) ENSPLAG00000011704 ENSPLAG00000011708 SCRT1 (ENSPLAG00000011718) zgc:63863 (ENSPLAG00000011723) dgat1a (ENSPLAG00000011729) cfap20 (ENSPLAG00000011743) SLC45A4 (ENSPLAG00000011749) #16 ENSPLAG00000011758 #20 ENSPLAG00000011768 ENSPLAG00000011795 #22 ENSPLAG00000011819 #22 Sailfin molly MODERN SPECIES 49 cyp51 (ENSPLAG00000011514) ENSPLAG00000011562 MTERF1 (ENSPLAG00000011584) dus3l (ENSPLAG00000011636) cndp2 (ENSPLAG00000011675) cndp2 (ENSPLAG00000011693) ENSPLAG00000011704 ENSPLAG00000011708 SCRT1 (ENSPLAG00000011718) zgc:63863 (ENSPLAG00000011723) dgat1a (ENSPLAG00000011729) cfap20 (ENSPLAG00000011743) SLC45A4 (ENSPLAG00000011749) #16 ENSPLAG00000011758 #20 ENSPLAG00000011768 ENSPLAG00000011795 #22 ENSPLAG00000011819 #22 Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 44 ENSPLAG00000013308 #22 ENSPLAG00000013321 #22 rplp1 (ENSPLAG00000013328) clptm1l (ENSPLAG00000013403) trps1 (ENSPLAG00000013413) Sailfin molly MODERN SPECIES 44 ENSPLAG00000013308 #22 ENSPLAG00000013321 #22 rplp1 (ENSPLAG00000013328) clptm1l (ENSPLAG00000013403) trps1 (ENSPLAG00000013413) Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Pomacentridae ANCESTRAL SPECIES 7 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Bicolor damselfish MODERN SPECIES 1074 DENND3 (ENSSPAG00000001255) #20 PTK2 (ENSSPAG00000001317) #22 rplp1 (ENSSPAG00000001515) clptm1l (ENSSPAG00000001520) Pomacentridae_A ANCESTRAL SPECIES 99 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c.j ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554.r ENSGT00390000004554.q ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a Amphiprion ANCESTRAL SPECIES 186 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c.j ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554.r ENSGT00390000004554.q ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a Orange clownfish MODERN SPECIES 8 MTERF1 (ENSAPEG00000005877) dus3l (ENSAPEG00000005828) ENSAPEG00000005796 cndp2 (ENSAPEG00000005779) ENSAPEG00000005709 ENSAPEG00000005691 SCRT1 (ENSAPEG00000005677) KLHL10 (ENSAPEG00000005598) zgc:63863 (ENSAPEG00000005579) dgat1a (ENSAPEG00000005517) cfap20 (ENSAPEG00000005503) cfap20 (ENSAPEG00000005472) GPR20 (ENSAPEG00000005428) #15 SLC45A4 (ENSAPEG00000005346) #16 DENND3 (ENSAPEG00000005252) #20 PTK2 (ENSAPEG00000005023) #22 rplp1 (ENSAPEG00000004985) clptm1l (ENSAPEG00000004913) trps1 (ENSAPEG00000004813) CSMD3 (ENSAPEG00000004568) tshz1 (ENSAPEG00000004494) ENSAPEG00000004484 ENSAPEG00000004472 ENSAPEG00000004455 ddah2 (ENSAPEG00000004429) ENSAPEG00000004411 clic1 (ENSAPEG00000004376) ENSAPEG00000004363 ENSAPEG00000004344 CSNK2B (ENSAPEG00000004320) prrc2a (ENSAPEG00000004231) Clown anemonefish MODERN SPECIES 737 SCRT1 (ENSAOCG00000023304) KLHL10 (ENSAOCG00000023298) zgc:63863 (ENSAOCG00000023288) dgat1a (ENSAOCG00000023266) cfap20 (ENSAOCG00000023222) cfap20 (ENSAOCG00000023200) GPR20 (ENSAOCG00000023178) #15 SLC45A4 (ENSAOCG00000023156) #16 DENND3 (ENSAOCG00000023131) #20 PTK2 (ENSAOCG00000023071) #22 Spiny chromis MODERN SPECIES 379 ENSAPOG00000015175 SCRT1 (ENSAPOG00000015197) KLHL10 (ENSAPOG00000015217) zgc:63863 (ENSAPOG00000015224) dgat1a (ENSAPOG00000015313) cfap20 (ENSAPOG00000015348) cfap20 (ENSAPOG00000015367) GPR20 (ENSAPOG00000015397) #15 SLC45A4 (ENSAPOG00000015411) #16 DENND3 (ENSAPOG00000015424) #20 PTK2 (ENSAPOG00000015508) #22 rplp1 (ENSAPOG00000015519) clptm1l (ENSAPOG00000015592) Cichlidae ANCESTRAL SPECIES 7 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Midas cichlid MODERN SPECIES 1307 PTK2 (ENSACIG00000018814) #22 ENSACIG00000018806 clptm1l (ENSACIG00000018782) trps1 (ENSACIG00000018741) ENSACIG00000018731 ENSACIG00000018718 CSMD3 (ENSACIG00000018627) tshz1 (ENSACIG00000018602) ENSACIG00000018594 SYNGAP1 (ENSACIG00000018557) vps72a (ENSACIG00000018543) lingo4a (ENSACIG00000018535) ENSACIG00000018515 ENSACIG00000018495 SV2A (ENSACIG00000018471) sf3b4 (ENSACIG00000018455) Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00940000163253.a.a.b ENSGT00940000156500.g ENSGT00940000156500.h.a ENSGT00940000156500.h.b ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c.e ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Nile tilapia MODERN SPECIES 13 cndp2 (ENSONIG00000036243) RECQL4 (ENSONIG00000019801) ENSONIG00000019806 ENSONIG00000031414 SCRT1 (ENSONIG00000019809) ENSONIG00000037409 ENSONIG00000042862 ENSONIG00000030309 ENSONIG00000038713 zgc:63863 (ENSONIG00000002857) dgat1a (ENSONIG00000002849) cfap20 (ENSONIG00000002845) GPR20 (ENSONIG00000037263) #15 SLC45A4 (ENSONIG00000002838) #16 DENND3 (ENSONIG00000002833) #20 PTK2 (ENSONIG00000002815) #22 rplp1 (ENSONIG00000002814) clptm1l (ENSONIG00000002800) trps1 (ENSONIG00000038056) CSMD3 (ENSONIG00000002776) tshz1 (ENSONIG00000002775) znf516 (ENSONIG00000030464) ENSONIG00000020851 SYNGAP1 (ENSONIG00000002773) ENSONIG00000002770 vps72a (ENSONIG00000002771) lingo4a (ENSONIG00000020850) ENSONIG00000002754 SV2A (ENSONIG00000002737) sf3b4 (ENSONIG00000002730) LIX1L (ENSONIG00000002728) Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500.g ENSGT00940000156500.h.a ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c.e ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Haplochromini ANCESTRAL SPECIES 5 ENSGT00940000156500.g ENSGT00940000156500.h.a.b.a.a ENSGT00940000156500.h.b ENSGT00940000156500.h.a.a ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c.e ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00940000156500.h.b ENSGT01100000263483.E.a.c.a.b.a.b ENSGT00940000156500.h.a.b.a.b.b ENSGT00940000156500.h.a.a ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c.e.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a P. nyererei DUPLICATION P. nyererei DUPLICATION P. nyererei MODERN SPECIES 323 ENSPNYG00000013308 ENSPNYG00000013293 #22 ENSPNYG00000013275 #22 ENSPNYG00000013260 #22 rplp1 (ENSPNYG00000013249) clptm1l (ENSPNYG00000013208) ENSPNYG00000013173 ENSPNYG00000013159 CSMD3 (ENSPNYG00000013030) tshz1 (ENSPNYG00000012989) znf516 (ENSPNYG00000012972) ENSPNYG00000012965 SYNGAP1 (ENSPNYG00000012872) vps72a (ENSPNYG00000012841) ENSPNYG00000012824 ENSPNYG00000012786 ENSPNYG00000012762 P. nyererei MODERN SPECIES 323 ENSPNYG00000013308 ENSPNYG00000013293 #22 ENSPNYG00000013275 #22 ENSPNYG00000013260 #22 rplp1 (ENSPNYG00000013249) clptm1l (ENSPNYG00000013208) ENSPNYG00000013173 ENSPNYG00000013159 CSMD3 (ENSPNYG00000013030) tshz1 (ENSPNYG00000012989) znf516 (ENSPNYG00000012972) ENSPNYG00000012965 SYNGAP1 (ENSPNYG00000012872) vps72a (ENSPNYG00000012841) ENSPNYG00000012824 ENSPNYG00000012786 ENSPNYG00000012762 SV2A (ENSPNYG00000012723) sf3b4 (ENSPNYG00000012700) P. nyererei MODERN SPECIES 323 ENSPNYG00000013308 ENSPNYG00000013293 #22 ENSPNYG00000013275 #22 ENSPNYG00000013260 #22 rplp1 (ENSPNYG00000013249) clptm1l (ENSPNYG00000013208) ENSPNYG00000013173 ENSPNYG00000013159 CSMD3 (ENSPNYG00000013030) tshz1 (ENSPNYG00000012989) znf516 (ENSPNYG00000012972) ENSPNYG00000012965 SYNGAP1 (ENSPNYG00000012872) vps72a (ENSPNYG00000012841) ENSPNYG00000012824 ENSPNYG00000012786 ENSPNYG00000012762 SV2A (ENSPNYG00000012723) Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00940000156500.g ENSGT00940000156500.h.a.b.a.a ENSGT00940000156500.h.b ENSGT01100000263483.E.a.c.a.b.a.b ENSGT00940000156500.h.a.a ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c.e.c.a.a ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a ENSGT00760000119766 Zebra mbuna MODERN SPECIES 1104 cndp2 (ENSMZEG00005026671) cndp2 (ENSMZEG00005026679) ENSMZEG00005026691 cndp2 (ENSMZEG00005026696) RECQL4 (ENSMZEG00005026699) ENSMZEG00005026701 ENSMZEG00005026702 KLHL10 (ENSMZEG00005026703) KLHL10 (ENSMZEG00005026704) zgc:63863 (ENSMZEG00005026705) dgat1a (ENSMZEG00005026706) cfap20 (ENSMZEG00005026708) ENSMZEG00005026709 #15 SLC45A4 (ENSMZEG00005026711) #16 DENND3 (ENSMZEG00005026714) #20 PTK2 (ENSMZEG00005026719) #22 rplp1 (ENSMZEG00005026720) clptm1l (ENSMZEG00005026722) trps1 (ENSMZEG00005026723) CSMD3 (ENSMZEG00005026724) tshz1 (ENSMZEG00005026725) ENSMZEG00005026726 znf516 (ENSMZEG00005026727) ENSMZEG00005026728 ENSMZEG00005026729 vps72a (ENSMZEG00005026730) lingo4a (ENSMZEG00005026731) ENSMZEG00005026732 ENSMZEG00005026735 SV2A (ENSMZEG00005026738) sf3b4 (ENSMZEG00005026741) Eastern happy MODERN SPECIES 13 cndp2 (ENSACLG00000011738) cndp2 (ENSACLG00000011770) ENSACLG00000011804 cndp2 (ENSACLG00000011810) ENSACLG00000011982 ENSACLG00000012028 SCRT1 (ENSACLG00000012046) KLHL10 (ENSACLG00000012065) KLHL10 (ENSACLG00000012119) zgc:63863 (ENSACLG00000012165) dgat1a (ENSACLG00000012220) cfap20 (ENSACLG00000012271) ENSACLG00000012293 #15 SLC45A4 (ENSACLG00000012397) #16 DENND3 (ENSACLG00000012420) #20 PTK2 (ENSACLG00000012512) #22 rplp1 (ENSACLG00000012690) clptm1l (ENSACLG00000012698) trps1 (ENSACLG00000013131) ENSACLG00000013155 CSMD3 (ENSACLG00000013677) tshz1 (ENSACLG00000013882) znf516 (ENSACLG00000013902) ENSACLG00000013930 SYNGAP1 (ENSACLG00000013965) vps72a (ENSACLG00000014023) ctss1 (ENSACLG00000014073) lingo4a (ENSACLG00000014091) ENSACLG00000014098 SV2A (ENSACLG00000014186) sf3b4 (ENSACLG00000014260) Burton s mouthbrooder MODERN SPECIES 288 PTK2 (ENSHBUG00000023488) #22 rplp1 (ENSHBUG00000023496) clptm1l (ENSHBUG00000023587) trps1 (ENSHBUG00000023601) CSMD3 (ENSHBUG00000023828) tshz1 (ENSHBUG00000023837) znf516 (ENSHBUG00000001908) ENSHBUG00000001913 ENSHBUG00000001931 vps72a (ENSHBUG00000001951) lingo4a (ENSHBUG00000001961) ENSHBUG00000001976 ENSHBUG00000001992 SV2A (ENSHBUG00000002013) sf3b4 (ENSHBUG00000002028) LIX1L (ENSHBUG00000000954) Lyretail cichlid DUPLICATION Lyretail cichlid DUPLICATION Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 302 ENSNBRG00000014962 cndp2 (ENSNBRG00000014933) slc39a4 (ENSNBRG00000014915) ENSNBRG00000014895 SCRT1 (ENSNBRG00000014882) KLHL10 (ENSNBRG00000014863) zgc:63863 (ENSNBRG00000014838) dgat1a (ENSNBRG00000014736) cfap20 (ENSNBRG00000014678) GPR20 (ENSNBRG00000014662) #15 SLC45A4 (ENSNBRG00000014628) #16 ENSNBRG00000014566 #20 ENSNBRG00000014525 #22 ENSNBRG00000014497 #22 ENSNBRG00000014483 ENSNBRG00000014464 #22 rplp1 (ENSNBRG00000014452) clptm1l (ENSNBRG00000014408) trps1 (ENSNBRG00000014352) CSMD3 (ENSNBRG00000014186) tshz1 (ENSNBRG00000014165) znf516 (ENSNBRG00000014157) ENSNBRG00000014140 SYNGAP1 (ENSNBRG00000014033) vps72a (ENSNBRG00000014002) lingo4a (ENSNBRG00000013990) ENSNBRG00000013953 ENSNBRG00000013925 SV2A (ENSNBRG00000013892) sf3b4 (ENSNBRG00000013865) LIX1L (ENSNBRG00000013844) Lyretail cichlid MODERN SPECIES 302 dus3l (ENSNBRG00000015011) ENSNBRG00000014968 ENSNBRG00000014962 cndp2 (ENSNBRG00000014933) slc39a4 (ENSNBRG00000014915) ENSNBRG00000014895 SCRT1 (ENSNBRG00000014882) KLHL10 (ENSNBRG00000014863) zgc:63863 (ENSNBRG00000014838) dgat1a (ENSNBRG00000014736) cfap20 (ENSNBRG00000014678) GPR20 (ENSNBRG00000014662) #15 SLC45A4 (ENSNBRG00000014628) #16 ENSNBRG00000014566 #20 ENSNBRG00000014525 #22 ENSNBRG00000014497 #22 ENSNBRG00000014483 ENSNBRG00000014464 #22 rplp1 (ENSNBRG00000014452) clptm1l (ENSNBRG00000014408) trps1 (ENSNBRG00000014352) CSMD3 (ENSNBRG00000014186) tshz1 (ENSNBRG00000014165) znf516 (ENSNBRG00000014157) ENSNBRG00000014140 SYNGAP1 (ENSNBRG00000014033) vps72a (ENSNBRG00000014002) lingo4a (ENSNBRG00000013990) ENSNBRG00000013953 ENSNBRG00000013925 SV2A (ENSNBRG00000013892) Lyretail cichlid MODERN SPECIES 302 ENSNBRG00000015055 dus3l (ENSNBRG00000015011) ENSNBRG00000014968 ENSNBRG00000014962 cndp2 (ENSNBRG00000014933) slc39a4 (ENSNBRG00000014915) ENSNBRG00000014895 SCRT1 (ENSNBRG00000014882) KLHL10 (ENSNBRG00000014863) zgc:63863 (ENSNBRG00000014838) dgat1a (ENSNBRG00000014736) cfap20 (ENSNBRG00000014678) GPR20 (ENSNBRG00000014662) #15 SLC45A4 (ENSNBRG00000014628) #16 ENSNBRG00000014566 #20 ENSNBRG00000014525 #22 ENSNBRG00000014497 #22 ENSNBRG00000014483 ENSNBRG00000014464 #22 rplp1 (ENSNBRG00000014452) clptm1l (ENSNBRG00000014408) trps1 (ENSNBRG00000014352) CSMD3 (ENSNBRG00000014186) tshz1 (ENSNBRG00000014165) znf516 (ENSNBRG00000014157) ENSNBRG00000014140 SYNGAP1 (ENSNBRG00000014033) vps72a (ENSNBRG00000014002) lingo4a (ENSNBRG00000013990) ENSNBRG00000013953 ENSNBRG00000013925 Lyretail cichlid MODERN SPECIES 331 MTSS1 (ENSNBRG00000019815) mal2 (ENSNBRG00000019909) si:ch211-93i7.4 (ENSNBRG00000019931) TNFRSF11B (ENSNBRG00000019947) ENSNBRG00000020004 ENSNBRG00000020042 CARMIL1 (ENSNBRG00000020057) scgn (ENSNBRG00000020188) CCN3 (ENSNBRG00000020277) ENSNBRG00000020519 sntb1 (ENSNBRG00000020529) ENSNBRG00000020565 ENSNBRG00000020616 #37 PTP4A3 (ENSNBRG00000020695) #14 ndrg1b (ENSNBRG00000020757) ENSNBRG00000020942 #22 ENSNBRG00000020964 ##22 ENSNBRG00000020979 ##22 ENSNBRG00000021124 MRS2 (ENSNBRG00000021882) ENSNBRG00000021901 CPQ (ENSNBRG00000021915) dscc1 (ENSNBRG00000021943) mrpl13 (ENSNBRG00000021965) COL14A1 (ENSNBRG00000022015) deptor (ENSNBRG00000022094) LIMD1 (ENSNBRG00000022129) lars2 (ENSNBRG00000022165) TMEM158 (ENSNBRG00000022207) cdcp1a (ENSNBRG00000022216) ENSNBRG00000022232 Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Anabantaria ANCESTRAL SPECIES 16 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a ENSGT00760000119766 Anabantoidei ANCESTRAL SPECIES 19 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a ENSGT00760000119766 Climbing perch MODERN SPECIES 2 MTERF1 (ENSATEG00000011055) dus3l (ENSATEG00000011064) ENSATEG00000011138 ENSATEG00000011189 ENSATEG00000011464 ENSATEG00000011645 ENSATEG00000011660 ENSATEG00000026499 zgc:63863 (ENSATEG00000011715) dgat1a (ENSATEG00000011833) ENSATEG00000026031 cfap20 (ENSATEG00000030112) ENSATEG00000011899 #15 ENSATEG00000011943 #16 DENND3 (ENSATEG00000012018) #20 ENSATEG00000012064 #22 ENSATEG00000012174 clptm1l (ENSATEG00000012184) ENSATEG00000012244 ENSATEG00000012278 ENSATEG00000012508 ENSATEG00000012526 ENSATEG00000012551 ENSATEG00000012560 ENSATEG00000028699 ENSATEG00000012771 ENSATEG00000012784 ENSATEG00000012795 ENSATEG00000012844 ENSATEG00000012853 ENSATEG00000027797 Siamese fighting fish MODERN SPECIES 2 slc39a4 (ENSBSLG00000013723) dus3l (ENSBSLG00000013508) ENSBSLG00000013459 cndp2 (ENSBSLG00000013395) RECQL4 (ENSBSLG00000013203) ENSBSLG00000013118 slc39a4 (ENSBSLG00000013147) ENSBSLG00000013078 SCRT1 (ENSBSLG00000013037) zgc:63863 (ENSBSLG00000012203) dgat1a (ENSBSLG00000011772) cfap20 (ENSBSLG00000011160) ENSBSLG00000011150 #15 SLC45A4 (ENSBSLG00000011127) #16 DENND3 (ENSBSLG00000010895) #20 PTK2 (ENSBSLG00000010100) #22 rplp1 (ENSBSLG00000010024) clptm1l (ENSBSLG00000008845) trps1 (ENSBSLG00000008809) ENSBSLG00000008805 tshz1 (ENSBSLG00000008345) znf516 (ENSBSLG00000008286) RXFP4 (ENSBSLG00000019841) SYNGAP1 (ENSBSLG00000019025) vps72a (ENSBSLG00000018912) lingo4a (ENSBSLG00000018905) ctss1 (ENSBSLG00000018880) SV2A (ENSBSLG00000018624) sf3b4 (ENSBSLG00000018611) LIX1L (ENSBSLG00000018594) ENSBSLG00000018586 Zig-zag eel MODERN SPECIES 2 ENSMAMG00000015737 MTERF1 (ENSMAMG00000015682) dus3l (ENSMAMG00000015637) ENSMAMG00000015608 ENSMAMG00000015582 ENSMAMG00000015565 slc39a4 (ENSMAMG00000015561) ENSMAMG00000015541 ENSMAMG00000015514 zgc:63863 (ENSMAMG00000015459) dgat1a (ENSMAMG00000015394) cfap20 (ENSMAMG00000015366) ENSMAMG00000015327 #15 ENSMAMG00000015281 #16 ENSMAMG00000015260 #20 ENSMAMG00000015199 #22 ENSMAMG00000015182 clptm1l (ENSMAMG00000015115) ENSMAMG00000015100 ENSMAMG00000026702 ENSMAMG00000014951 ENSMAMG00000014926 ENSMAMG00000025372 ENSMAMG00000014910 ENSMAMG00000014773 ENSMAMG00000014737 ENSMAMG00000014730 ENSMAMG00000014698 ENSMAMG00000014692 ENSMAMG00000014681 ENSMAMG00000027440 Carangaria ANCESTRAL SPECIES 14 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Pleuronectoidei ANCESTRAL SPECIES 15 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Turbot MODERN SPECIES 14 ENSSMAG00000004854 ENSSMAG00000004888 ENSSMAG00000004896 ENSSMAG00000004934 ENSSMAG00000004943 ENSSMAG00000004982 ENSSMAG00000005002 ENSSMAG00000005041 zgc:63863 (ENSSMAG00000005137) ENSSMAG00000026994 dgat1a (ENSSMAG00000005178) cfap20 (ENSSMAG00000031899) ENSSMAG00000005278 #15 ENSSMAG00000005307 #16 DENND3 (ENSSMAG00000005636) #20 ENSSMAG00000005698 #22 ENSSMAG00000005950 ENSSMAG00000006061 ENSSMAG00000006107 ENSSMAG00000024835 ENSSMAG00000006560 ENSSMAG00000006570 ENSSMAG00000006587 ENSSMAG00000006697 ENSSMAG00000006726 ENSSMAG00000006733 ENSSMAG00000006780 ENSSMAG00000006796 ENSSMAG00000006837 ENSSMAG00000006846 ENSSMAG00000037593 Tongue sole MODERN SPECIES 9 cdk6 (ENSCSEG00000012577) hepacam2 (ENSCSEG00000012589) VPS50 (ENSCSEG00000012607) CALCR (ENSCSEG00000012673) tfpi2 (ENSCSEG00000012705) gngt1 (ENSCSEG00000012711) zgc:85777 (ENSCSEG00000012715) bet1 (ENSCSEG00000012731) col1a2 (ENSCSEG00000012737) ENSCSEG00000012762 ENSCSEG00000012778 ENSCSEG00000012783 ENSCSEG00000012791 ENSCSEG00000012798 ndufv1 (ENSCSEG00000012805) PTK2 (ENSCSEG00000012851) #22 rplp1 (ENSCSEG00000012994) clptm1l (ENSCSEG00000013040) ENSCSEG00000013063 trps1 (ENSCSEG00000013076) CSMD3 (ENSCSEG00000013095) tshz1 (ENSCSEG00000013167) znf516 (ENSCSEG00000013170) ENSCSEG00000013177 SYNGAP1 (ENSCSEG00000013184) ENSCSEG00000013225 FAM135B (ENSCSEG00000013367) #28 KHDRBS3 (ENSCSEG00000013385) #36 ST3GAL1 (ENSCSEG00000013408) ENSCSEG00000013425 ENSCSEG00000013448 Carangaria_A ANCESTRAL SPECIES 16 ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT01040000240400.c.a.b.a.b.a.a.b.b.e.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Seriola ANCESTRAL SPECIES 12 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT01040000240400.c.a.b.a.b.a.a.b.b.e.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Greater amberjack MODERN SPECIES 48 MTERF1 (ENSSDUG00000013580) dus3l (ENSSDUG00000013517) ENSSDUG00000013486 cndp2 (ENSSDUG00000013309) RECQL4 (ENSSDUG00000013245) slc39a4 (ENSSDUG00000013223) SCRT1 (ENSSDUG00000013215) KLHL10 (ENSSDUG00000013192) ENSSDUG00000013189 zgc:63863 (ENSSDUG00000013176) dgat1a (ENSSDUG00000013146) cfap20 (ENSSDUG00000013130) GPR20 (ENSSDUG00000013098) #15 SLC45A4 (ENSSDUG00000013026) #16 DENND3 (ENSSDUG00000012929) #20 PTK2 (ENSSDUG00000012750) #22 rplp1 (ENSSDUG00000012713) clptm1l (ENSSDUG00000012627) trps1 (ENSSDUG00000012576) ENSSDUG00000012561 CSMD3 (ENSSDUG00000012391) tshz1 (ENSSDUG00000012354) znf516 (ENSSDUG00000012341) ENSSDUG00000012328 SYNGAP1 (ENSSDUG00000012218) vps72a (ENSSDUG00000012188) lingo4a (ENSSDUG00000012181) ctss1 (ENSSDUG00000012145) ENSSDUG00000012123 SV2A (ENSSDUG00000012082) sf3b4 (ENSSDUG00000012064) Yellowtail amberjack MODERN SPECIES 2954 ENSSLDG00000011044 zgc:63863 (ENSSLDG00000011075) dgat1a (ENSSLDG00000011104) cfap20 (ENSSLDG00000011143) ENSSLDG00000011180 #15 SLC45A4 (ENSSLDG00000011250) #16 DENND3 (ENSSLDG00000011375) #20 PTK2 (ENSSLDG00000011667) #22 rplp1 (ENSSLDG00000011985) clptm1l (ENSSLDG00000012012) trps1 (ENSSLDG00000012102) ENSSLDG00000012131 CSMD3 (ENSSLDG00000012173) ENSSLDG00000012325 tshz1 (ENSSLDG00000012345) Barramundi perch MODERN SPECIES 225 PTK2 (ENSLCAG00010013097) #22 rplp1 (ENSLCAG00010012922) clptm1l (ENSLCAG00010012899) ENSLCAG00010012889 trps1 (ENSLCAG00010012884) CSMD3 (ENSLCAG00010012715) tshz1 (ENSLCAG00010012647) ENSLCAG00010012643 ENSLCAG00010012640 Eupercaria ANCESTRAL SPECIES 11 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Tetraodontidae ANCESTRAL SPECIES 20 ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 ENSGT00950000182940.b.a.b.a.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00940000159198.g ENSGT00390000009543 ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 ENSGT00390000004263.a.d.b ENSGT00950000182995.e.b.`b ENSGT00530000063631.a.k ENSGT00500000044921.a ENSGT00510000047245 ENSGT00940000165758 ENSGT00940000164175.b ENSGT00940000159342.a ENSGT00940000172951 ENSGT01050000244890.a.a.a.g ENSGT00940000159758 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 15 ywhaz (ENSTNIG00000009152) pabpc1b (ENSTNIG00000009153) ENSTNIG00000009154 LIX1L (ENSTNIG00000009155) sf3b4 (ENSTNIG00000009156) SV2A (ENSTNIG00000009157) ctss1 (ENSTNIG00000009158) lingo4a (ENSTNIG00000009159) ENSTNIG00000009160 ENSTNIG00000009161 SYNGAP1 (ENSTNIG00000009162) vps72a (ENSTNIG00000009163) GPR20 (ENSTNIG00000009164) #15 SLC45A4 (ENSTNIG00000002435) #16 DENND3 (ENSTNIG00000009165) #20 ENSTNIG00000009166 #22 PTK2 (ENSTNIG00000009167) #22 fam91a1 (ENSTNIG00000009169) spire1a (ENSTNIG00000009170) ENSTNIG00000009171 ATP6V1C1 (ENSTNIG00000009172) azin1b (ENSTNIG00000009173) adnp2b (ENSTNIG00000009174) ggcta (ENSTNIG00000009175) snrpd1 (ENSTNIG00000001224) ankib1a (ENSTNIG00000009176) ENSTNIG00000001242 fam83hb (ENSTNIG00000009177) grinaa (ENSTNIG00000000386) mapk15 (ENSTNIG00000009178) vps28 (ENSTNIG00000009179) Tetraodon MODERN SPECIES 15 pabpc1b (ENSTNIG00000009153) ENSTNIG00000009154 LIX1L (ENSTNIG00000009155) sf3b4 (ENSTNIG00000009156) SV2A (ENSTNIG00000009157) ctss1 (ENSTNIG00000009158) lingo4a (ENSTNIG00000009159) ENSTNIG00000009160 ENSTNIG00000009161 SYNGAP1 (ENSTNIG00000009162) vps72a (ENSTNIG00000009163) GPR20 (ENSTNIG00000009164) #15 SLC45A4 (ENSTNIG00000002435) #16 DENND3 (ENSTNIG00000009165) #20 ENSTNIG00000009166 #22 PTK2 (ENSTNIG00000009167) #22 fam91a1 (ENSTNIG00000009169) spire1a (ENSTNIG00000009170) ENSTNIG00000009171 ATP6V1C1 (ENSTNIG00000009172) azin1b (ENSTNIG00000009173) adnp2b (ENSTNIG00000009174) ggcta (ENSTNIG00000009175) snrpd1 (ENSTNIG00000001224) ankib1a (ENSTNIG00000009176) ENSTNIG00000001242 fam83hb (ENSTNIG00000009177) grinaa (ENSTNIG00000000386) mapk15 (ENSTNIG00000009178) vps28 (ENSTNIG00000009179) cap2 (ENSTNIG00000000065) Fugu MODERN SPECIES 3 pabpc1b (ENSTRUG00000003767) ENSTRUG00000004297 lix1l (ENSTRUG00000004344) sf3b4 (ENSTRUG00000004516) SV2A (ENSTRUG00000004781) ctss1 (ENSTRUG00000005311) lingo4a (ENSTRUG00000005626) ENSTRUG00000028553 ENSTRUG00000027221 SYNGAP1 (ENSTRUG00000005680) vps72a (ENSTRUG00000006093) GPR20 (ENSTRUG00000029161) #15 ENSTRUG00000031981 SLC45A4 (ENSTRUG00000006541) #16 DENND3 (ENSTRUG00000007196) #20 PTK2 (ENSTRUG00000007362) #22 lratd2a (ENSTRUG00000007744) fam91a1 (ENSTRUG00000007769) spire1a (ENSTRUG00000008095) ENSTRUG00000020546 ATP6V1C1 (ENSTRUG00000008427) azin1b (ENSTRUG00000020120) adnp2b (ENSTRUG00000030984) ggcta (ENSTRUG00000021278) snrpd1 (ENSTRUG00000008977) ankib1a (ENSTRUG00000009032) ENSTRUG00000023862 fam83hb (ENSTRUG00000009193) ENSTRUG00000029207 grina (ENSTRUG00000009217) mapk15 (ENSTRUG00000009284) Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a ENSGT00760000119766 European seabass MODERN SPECIES 22 cyp51 (ENSDLAG00005011976) ENSDLAG00005011838 dus3l (ENSDLAG00005011491) ENSDLAG00005030960 ENSDLAG00005011330 ENSDLAG00005010708 ENSDLAG00005010700 ENSDLAG00005010689 ENSDLAG00005010627 zgc:63863 (ENSDLAG00005027179) dgat1a (ENSDLAG00005010300) cfap20 (ENSDLAG00005010284) ENSDLAG00005010275 #15 ENSDLAG00005010272 #16 ENSDLAG00005010225 #20 ENSDLAG00005009634 #22 ENSDLAG00005009543 ENSDLAG00005009523 ENSDLAG00005006477 ENSDLAG00005006308 ENSDLAG00005006301 ENSDLAG00005006292 ENSDLAG00005005485 ENSDLAG00005031604 ENSDLAG00005028344 ENSDLAG00005030709 ENSDLAG00005034178 pabpc1b (ENSDLAG00005003138) ENSDLAG00005002987 znf706 (ENSDLAG00005026451) grhl2b (ENSDLAG00005002772) Large yellow croaker MODERN SPECIES 484 MTERF1 (ENSLCRG00005007098) dus3l (ENSLCRG00005007104) ENSLCRG00005007332 cndp2 (ENSLCRG00005007336) ENSLCRG00005007495 ENSLCRG00005007521 ENSLCRG00005007524 SCRT1 (ENSLCRG00005007526) KLHL10 (ENSLCRG00005007530) zgc:63863 (ENSLCRG00005007533) dgat1a (ENSLCRG00005003023) cfap20 (ENSLCRG00005004526) ENSLCRG00005004532 #15 SLC45A4 (ENSLCRG00005004535) #16 DENND3 (ENSLCRG00005004563) #20 PTK2 (ENSLCRG00005004656) #22 clptm1l (ENSLCRG00005005246) trps1 (ENSLCRG00005005352) ENSLCRG00005005355 CSMD3 (ENSLCRG00005005650) ENSLCRG00005006378 tshz1 (ENSLCRG00005006381) znf516 (ENSLCRG00005006383) ENSLCRG00005006389 SYNGAP1 (ENSLCRG00005006430) vps72a (ENSLCRG00005006882) lingo4a (ENSLCRG00005006894) ctss1 (ENSLCRG00005006898) CTSS (ENSLCRG00005006917) SV2A (ENSLCRG00005006957) sf3b4 (ENSLCRG00005007593) Gilthead seabream MODERN SPECIES 17 cyp51 (ENSSAUG00010013151) ENSSAUG00010013300 dus3l (ENSSAUG00010013314) ENSSAUG00010013955 cndp2 (ENSSAUG00010013976) ENSSAUG00010014271 ENSSAUG00010014274 ENSSAUG00010014275 SCRT1 (ENSSAUG00010014276) zgc:63863 (ENSSAUG00010014277) dgat1a (ENSSAUG00010014280) cfap20 (ENSSAUG00010014298) GPR20 (ENSSAUG00010014299) #15 SLC45A4 (ENSSAUG00010014300) #16 DENND3 (ENSSAUG00010014304) #20 PTK2 (ENSSAUG00010014341) #22 rplp1 (ENSSAUG00010016580) clptm1l (ENSSAUG00010016589) trps1 (ENSSAUG00010016602) CSMD3 (ENSSAUG00010016627) tshz1 (ENSSAUG00010016651) znf516 (ENSSAUG00010016652) RXFP4 (ENSSAUG00010016653) SYNGAP1 (ENSSAUG00010016670) vps72a (ENSSAUG00010017287) ENSSAUG00010017290 ENSSAUG00010017292 SV2A (ENSSAUG00010001240) sf3b4 (ENSSAUG00010001398) LIX1L (ENSSAUG00010001405) ENSSAUG00010001411 Perciformes ANCESTRAL SPECIES 11 ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408.f ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Perciformes_a ANCESTRAL SPECIES 14 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000163253.a.a.b ENSGT00940000156500 ENSGT00940000160387 ENSGT00940000160042 ENSGT00940000154491.c.b.b ENSGT00940000154664.h.n.c ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000161408.f ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 ENSGT00390000005869.a Channel bull blenny MODERN SPECIES 2 MTERF1 (ENSCGOG00000001566) dus3l (ENSCGOG00000001553) ENSCGOG00000001548 cndp2 (ENSCGOG00000001355) ENSCGOG00000001340 RECQL4 (ENSCGOG00000001283) ENSCGOG00000014107 SCRT1 (ENSCGOG00000014105) KLHL10 (ENSCGOG00000014089) zgc:63863 (ENSCGOG00000014085) dgat1a (ENSCGOG00000013924) cfap20 (ENSCGOG00000013912) GPR20 (ENSCGOG00000013911) #15 SLC45A4 (ENSCGOG00000013897) #16 DENND3 (ENSCGOG00000013831) #20 PTK2 (ENSCGOG00000011000) #22 rplp1 (ENSCGOG00000010946) clptm1l (ENSCGOG00000010577) ENSCGOG00000010558 trps1 (ENSCGOG00000010550) ENSCGOG00000010544 CSMD3 (ENSCGOG00000010256) tshz1 (ENSCGOG00000010240) RXFP4 (ENSCGOG00000010238) SYNGAP1 (ENSCGOG00000009649) vps72a (ENSCGOG00000009632) lingo4a (ENSCGOG00000009630) ctss1 (ENSCGOG00000009468) ENSCGOG00000009104 SV2A (ENSCGOG00000008440) sf3b4 (ENSCGOG00000008421) Pike perch MODERN SPECIES 13 MTERF1 (ENSSLUG00000000198) ENSSLUG00000000202 dus3l (ENSSLUG00000000227) ENSSLUG00000000253 cndp2 (ENSSLUG00000000375) RECQL4 (ENSSLUG00000000620) ENSSLUG00000000632 SCRT1 (ENSSLUG00000000637) KLHL10 (ENSSLUG00000000646) zgc:63863 (ENSSLUG00000000669) dgat1a (ENSSLUG00000000703) cfap20 (ENSSLUG00000000762) ENSSLUG00000000766 #15 SLC45A4 (ENSSLUG00000000775) #16 DENND3 (ENSSLUG00000000799) #20 PTK2 (ENSSLUG00000000917) #22 rplp1 (ENSSLUG00000001213) clptm1l (ENSSLUG00000001221) ENSSLUG00000001237 trps1 (ENSSLUG00000001242) CSMD3 (ENSSLUG00000001279) tshz1 (ENSSLUG00000001373) ENSSLUG00000001375 ENSSLUG00000001380 SYNGAP1 (ENSSLUG00000001383) vps72a (ENSSLUG00000001392) lingo4a (ENSSLUG00000001395) ctss1 (ENSSLUG00000001398) ENSSLUG00000001399 SV2A (ENSSLUG00000001407) sf3b4 (ENSSLUG00000001425) Cottioidei ANCESTRAL SPECIES 16 ENSGT00530000063721.A ENSGT00930000151026 ENSGT00730000110871.a.a.a.a ENSGT00530000063817.a ENSGT00550000075134 ENSGT00940000156500 ENSGT00940000160042 ENSGT00730000112601 ENSGT00940000154491.c.b.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b ENSGT00390000004554 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000171019 ENSGT00940000161408.f ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00940000155176.o.b ENSGT00950000182940.b.a.b.a.b ENSGT00870000136537 Stickleback DUPLICATION Stickleback MODERN SPECIES 9 si:dkey-266f7.9 (ENSGACG00000004184) krit1 (ENSGACG00000004168) cyp51 (ENSGACG00000004161) ENSGACG00000004143 dus3l (ENSGACG00000004109) cndp2 (ENSGACG00000004084) ENSGACG00000004076 SCRT1 (ENSGACG00000004072) zgc:63863 (ENSGACG00000004066) dgat1a (ENSGACG00000004051) cfap20 (ENSGACG00000004039) ENSGACG00000004037 #15 SLC45A4 (ENSGACG00000004032) #16 DENND3 (ENSGACG00000004021) #20 PTK2 (ENSGACG00000004011) #22 ENSGACG00000004003 #22 rplp1 (ENSGACG00000003995) clptm1l (ENSGACG00000003981) trps1 (ENSGACG00000003970) ENSGACG00000003969 CSMD3 (ENSGACG00000003938) tshz1 (ENSGACG00000003937) ENSGACG00000003934 ENSGACG00000003932 ENSGACG00000003931 SYNGAP1 (ENSGACG00000003919) vps72a (ENSGACG00000003903) lingo4a (ENSGACG00000003902) ctss1 (ENSGACG00000003898) ENSGACG00000003870 SV2A (ENSGACG00000003844) Stickleback MODERN SPECIES 9 mrpl9 (ENSGACG00000004192) si:dkey-266f7.9 (ENSGACG00000004184) krit1 (ENSGACG00000004168) cyp51 (ENSGACG00000004161) ENSGACG00000004143 dus3l (ENSGACG00000004109) cndp2 (ENSGACG00000004084) ENSGACG00000004076 SCRT1 (ENSGACG00000004072) zgc:63863 (ENSGACG00000004066) dgat1a (ENSGACG00000004051) cfap20 (ENSGACG00000004039) ENSGACG00000004037 #15 SLC45A4 (ENSGACG00000004032) #16 DENND3 (ENSGACG00000004021) #20 PTK2 (ENSGACG00000004011) #22 ENSGACG00000004003 #22 rplp1 (ENSGACG00000003995) clptm1l (ENSGACG00000003981) trps1 (ENSGACG00000003970) ENSGACG00000003969 CSMD3 (ENSGACG00000003938) tshz1 (ENSGACG00000003937) ENSGACG00000003934 ENSGACG00000003932 ENSGACG00000003931 SYNGAP1 (ENSGACG00000003919) vps72a (ENSGACG00000003903) lingo4a (ENSGACG00000003902) ctss1 (ENSGACG00000003898) ENSGACG00000003870 Lumpfish MODERN SPECIES 2 rpz2 (ENSCLMG00005001575) krit1 (ENSCLMG00005001596) cyp51 (ENSCLMG00005001706) ENSCLMG00005001757 MTERF1 (ENSCLMG00005001788) dus3l (ENSCLMG00005001799) cndp2 (ENSCLMG00005002128) ENSCLMG00005002139 ENSCLMG00005002140 SCRT1 (ENSCLMG00005002141) zgc:63863 (ENSCLMG00005002142) dgat1a (ENSCLMG00005002143) cfap20 (ENSCLMG00005002144) GPR20 (ENSCLMG00005002145) #15 SLC45A4 (ENSCLMG00005002146) #16 PTK2 (ENSCLMG00005002160) #22 drc1 (ENSCLMG00005002232) rplp1 (ENSCLMG00005002236) clptm1l (ENSCLMG00005002245) ENSCLMG00005002260 CSMD3 (ENSCLMG00005002265) tshz1 (ENSCLMG00005002275) SV2A (ENSCLMG00005002276) sf3b4 (ENSCLMG00005002278) LIX1L (ENSCLMG00005002280) ENSCLMG00005002284 pabpc1b (ENSCLMG00005002299) ENSCLMG00005002337 znf706 (ENSCLMG00005002338) grhl2b (ENSCLMG00005002343) ncaldb (ENSCLMG00005002351) Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 71 ENSLBEG00000025617 RPRD1A (ENSLBEG00000025645) fkbp9 (ENSLBEG00000025665) crtap (ENSLBEG00000025699) ENSLBEG00000025722 fbxl2 (ENSLBEG00000025748) clasp2 (ENSLBEG00000025890) SLC45A4 (ENSLBEG00000026195) #16 DENND3 (ENSLBEG00000026220) #20 PTK2 (ENSLBEG00000026333) #22 rplp1 (ENSLBEG00000026469) clptm1l (ENSLBEG00000026499) trps1 (ENSLBEG00000026549) ENSLBEG00000026564 CSMD3 (ENSLBEG00000026598) tshz1 (ENSLBEG00000026670) znf516 (ENSLBEG00000026679) ENSLBEG00000026684 ENSLBEG00000026694 SYNGAP1 (ENSLBEG00000026710) vps72a (ENSLBEG00000026731) lingo4a (ENSLBEG00000026746) ctss1 (ENSLBEG00000026758) ENSLBEG00000026788 SV2A (ENSLBEG00000026804) Ballan wrasse MODERN SPECIES 69 PTK2 (ENSLBEG00000023042) #22 ENSLBEG00000023013 ##22 ENSLBEG00000022997 CCN3 (ENSLBEG00000022979) scgn (ENSLBEG00000022946) CARMIL1 (ENSLBEG00000022854) ENSLBEG00000022820 TNFRSF11B (ENSLBEG00000022804) ENSLBEG00000022790 ENSLBEG00000022774 ENSLBEG00000022761 mal2 (ENSLBEG00000022749) MTSS1 (ENSLBEG00000022637) TMEM65 (ENSLBEG00000022553) mboat1 (ENSLBEG00000022521) ENSLBEG00000022497 Osteoglossiformes ANCESTRAL SPECIES 6 ENSGT00940000161897.b.a ENSGT00390000018422 ENSGT00390000016546 ENSGT00940000160387 ENSGT00940000156930.z ENSGT00940000160042 ENSGT00940000154491.c.a.b ENSGT00390000014944.b ENSGT00950000183081.b.i.b.a ENSGT00950000183081.b.i.b.b ENSGT00390000004554 ENSGT00940000166193 ENSGT01040000240444.B.a #15 ENSGT00950000182914.a.a.a.c.b #16 ENSGT00940000155784.C.u.b #20 ENSGT00940000155113.a.a #22 ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00390000009988 ENSGT00390000016823 ENSGT00390000012412 ENSGT00940000157222.a.b ENSGT00940000158117 ENSGT00390000015984 ENSGT00390000008161.a.b ENSGT00940000155321 ENSGT00390000010887.a ENSGT00940000160706 ENSGT00940000176888 ENSGT01030000235077 ENSGT00940000154655.a.i.b P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 13 HSF1 (ENSPKIG00000020336) scxa (ENSPKIG00000020300) bop1 (ENSPKIG00000020273) hgh1 (ENSPKIG00000020253) RECQL4 (ENSPKIG00000020206) MROH1 (ENSPKIG00000020137) ENSPKIG00000020105 scrt1a (ENSPKIG00000020085) zgc:63863 (ENSPKIG00000020056) dgat1a (ENSPKIG00000019953) cfap20 (ENSPKIG00000020019) ENSPKIG00000019860 GPR20 (ENSPKIG00000019821) #15 SLC45A4 (ENSPKIG00000019786) #16 DENND3 (ENSPKIG00000019719) #20 PTK2 (ENSPKIG00000019417) #22 rplp1 (ENSPKIG00000019305) ENSPKIG00000019289 ENSPKIG00000019273 ENSPKIG00000019261 clptm1l (ENSPKIG00000019212) MRS2 (ENSPKIG00000019173) tpmt.1 (ENSPKIG00000019144) ENSPKIG00000019102 sdc2 (ENSPKIG00000019071) angpt1 (ENSPKIG00000019044) abrab (ENSPKIG00000018974) SAMD12 (ENSPKIG00000018954) EXT1 (ENSPKIG00000018929) med30 (ENSPKIG00000018912) SLC30A8 (ENSPKIG00000018892) P. kingsleyae MODERN SPECIES 1 dync1i1 (ENSPKIG00000021394) pon1 (ENSPKIG00000021420) ENSPKIG00000021446 ENSPKIG00000021505 PHF20L1 (ENSPKIG00000021529) tg (ENSPKIG00000021671) SLA (ENSPKIG00000021885) ccn4b (ENSPKIG00000021901) PTP4A3 (ENSPKIG00000021939) #14 ENSPKIG00000021972 ENSPKIG00000021998 SCX (ENSPKIG00000022008) MROH1 (ENSPKIG00000022128) SCRT1 (ENSPKIG00000022303) SLC45A4 (ENSPKIG00000022320) #16 ENSPKIG00000022393 #22 ENSPKIG00000022502 CLPTM1L (ENSPKIG00000022517) ENSPKIG00000022549 CPQ (ENSPKIG00000022581) ext1b (ENSPKIG00000022642) Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 15 hsf1 (ENSSFOG00015010692) SCX (ENSSFOG00015010672) bop1 (ENSSFOG00015010596) hgh1 (ENSSFOG00015010554) RECQL4 (ENSSFOG00015010493) ENSSFOG00015029222 ENSSFOG00015010346 scrt1a (ENSSFOG00015001195) zgc:63863 (ENSSFOG00015010311) dgat1a (ENSSFOG00015010249) cfap20 (ENSSFOG00015010197) ENSSFOG00015010042 GPR20 (ENSSFOG00015009994) #15 SLC45A4 (ENSSFOG00015030998) #16 DENND3 (ENSSFOG00015009930) #20 PTK2 (ENSSFOG00015009767) #22 rplp1 (ENSSFOG00015009860) clptm1l (ENSSFOG00015009651) MRS2 (ENSSFOG00015009611) tpmt.1 (ENSSFOG00015009588) ENSSFOG00015025759 sdc2 (ENSSFOG00015009560) ENSSFOG00015024298 cfap20 (ENSSFOG00015009536) angpt1 (ENSSFOG00015009495) abrab (ENSSFOG00015025915) SAMD12 (ENSSFOG00015030534) ext1b (ENSSFOG00015030667) med30 (ENSSFOG00015029678) SLC30A8 (ENSSFOG00015009324) ENSSFOG00015009295 Asian bonytongue MODERN SPECIES 9 pon1 (ENSSFOG00015030107) ENSSFOG00015032720 ENSSFOG00015000649 PHF20L1 (ENSSFOG00015025925) SLA (ENSSFOG00015001015) tg (ENSSFOG00015000751) ccn4b (ENSSFOG00015001020) ndrg1b (ENSSFOG00015001027) ptp4a3a (ENSSFOG00015001075) #14 ENSSFOG00015001086 SCX (ENSSFOG00015001141) MROH1 (ENSSFOG00015001167) scrt1b (ENSSFOG00015010329) dgat1a (ENSSFOG00015001216) SLC45A4 (ENSSFOG00015001234) #16 ENSSFOG00015001252 #22 ENSSFOG00015001302 CPQ (ENSSFOG00015001341) ENSSFOG00015001399 ENSSFOG00015001443 ENSSFOG00015001518 ANKIB1 (ENSSFOG00015001568) ctnnb1 (ENSSFOG00015001677) ULK4 (ENSSFOG00015001754) TRAK1 (ENSSFOG00015001806) ccka (ENSSFOG00015030275) trim71 (ENSSFOG00015001866) TCAIM (ENSSFOG00015001891) ABHD5 (ENSSFOG00015001946) snrka (ENSSFOG00015001970) pomgnt2 (ENSSFOG00015002005) Reedfish DUPLICATION Reedfish MODERN SPECIES 484 ENSECRG00000018963 #22 Reedfish MODERN SPECIES 4 SCX (ENSECRG00000017218) bop1 (ENSECRG00000017193) hgh1 (ENSECRG00000017167) ENSECRG00000016086 ENSECRG00000015948 ENSECRG00000015809 ENSECRG00000015759 scrt1b (ENSECRG00000015740) zgc:63863 (ENSECRG00000015700) dgat1b (ENSECRG00000015654) cfap20 (ENSECRG00000015598) ENSECRG00000015223 GPR20 (ENSECRG00000015121) #15 SLC45A4 (ENSECRG00000015076) #16 DENND3 (ENSECRG00000014983) #20 PTK2 (ENSECRG00000014902) #22 rplp1 (ENSECRG00000014863) ENSECRG00000014824 ENSECRG00000014799 ago2 (ENSECRG00000013912) #23 chrac1 (ENSECRG00000013769) TRAPPC9 (ENSECRG00000013747) #25 kcnk9 (ENSECRG00000013733) #26 ENSECRG00000013701 ENSECRG00000013676 ENSECRG00000013659 #28 ENSECRG00000013641 #28 KHDRBS3 (ENSECRG00000013615) #36 ENSECRG00000013599 ZFAT (ENSECRG00000013533) #37 ENSECRG00000013487 Elephant shark MODERN SPECIES 1538 c2cd5 (ENSCMIG00000016617) st8sia1 (ENSCMIG00000016605) ENSCMIG00000016601 ENSCMIG00000016596 recql (ENSCMIG00000016584) golt1bb (ENSCMIG00000016567) ENSCMIG00000016558 gys2 (ENSCMIG00000016553) ENSCMIG00000016548 ldhb (ENSCMIG00000016533) KCNJ8 (ENSCMIG00000016524) kcnj8 (ENSCMIG00000016521) abcc9 (ENSCMIG00000016431) cmasa (ENSCMIG00000016343) DENND3 (ENSCMIG00000016333) ##20 PTK2 (ENSCMIG00000016291) #22 rplp1 (ENSCMIG00000016263) ago2 (ENSCMIG00000015967) #23 CHRAC1 (ENSCMIG00000015807) #24 ENSCMIG00000015800 ARHGAP28 (ENSCMIG00000015793) lama1 (ENSCMIG00000015397) LRRC30 (ENSCMIG00000015235) PTPRM (ENSCMIG00000014422) ENSCMIG00000014151 rab12 (ENSCMIG00000014150) ENSCMIG00000014148 MTCL1 (ENSCMIG00000014147) ENSCMIG00000013899 ndufv2 (ENSCMIG00000013749) ankrd12 (ENSCMIG00000013742) Gnathostomata ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Euteleosteomorpha ANCESTRAL SPECIES 77 ENSGT00940000161897.b.b ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000155113.a.b ##22 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00940000164478.b ENSGT00940000160520 ENSGT00940000155471.d ENSGT00940000156541 ENSGT00940000170917 ENSGT00940000155697.A ENSGT00390000003571.h ENSGT00390000001827 ENSGT00390000012832 ENSGT00390000016277.a.k ENSGT00940000157537 Acanthomorphata ANCESTRAL SPECIES 107 ENSGT00940000162740.l ENSGT00530000063631.a.l ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00940000164478.b ENSGT00940000160520 ENSGT00940000155471.d ENSGT00940000156541 ENSGT00940000170917 ENSGT00940000155697.A ENSGT00390000003571.h ENSGT00940000156930 ENSGT00940000166537 ENSGT00940000166159 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00390000014996 ENSGT00550000074870 ENSGT00550000074694.a.k ENSGT00950000182893.a.a.a.a.b ENSGT00390000011435 ENSGT00940000160768 ENSGT00940000153859.b ENSGT00530000063156.b ENSGT00950000182893.a.a.a.b.c ENSGT00390000010337.B.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Pinecone sodierfish MODERN SPECIES 7 ENSMMDG00005012575 ENSMMDG00005012576 ENSMMDG00005012578 TBC1D31 (ENSMMDG00005012596) derl1 (ENSMMDG00005013015) zhx2a (ENSMMDG00005013022) has2 (ENSMMDG00005013027) ENSMMDG00005013032 ENSMMDG00005013035 sntb1 (ENSMMDG00005013044) MTBP (ENSMMDG00005013051) ENSMMDG00005013054 #37 PTP4A3 (ENSMMDG00005013056) #14 ENSMMDG00005013057 ENSMMDG00005013063 ENSMMDG00005013441 ##22 ENSMMDG00005020281 ENSMMDG00005020286 ENSMMDG00005020290 TRAK1 (ENSMMDG00005020299) ENSMMDG00005020331 ctnnb1 (ENSMMDG00005020999) ENSMMDG00005022763 ENSMMDG00005022764 ENSMMDG00005022767 hint3 (ENSMMDG00005022769) ENSMMDG00005022773 trmt11 (ENSMMDG00005022789) ENSMMDG00005022901 rspo3 (ENSMMDG00005022903) mdh2 (ENSMMDG00005022904) Percomorphaceae ANCESTRAL SPECIES ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00940000159963 ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 515 PNPLA7 (ENSHCOG00000001566) mrpl41 (ENSHCOG00000001577) dph7 (ENSHCOG00000001585) sh3glb2a (ENSHCOG00000001595) ENSHCOG00000001601 ENSHCOG00000001606 ENSHCOG00000001613 PPP6C (ENSHCOG00000001623) golga1 (ENSHCOG00000001647) rpl35 (ENSHCOG00000001654) ENSHCOG00000001661 olfml2a (ENSHCOG00000001668) nr6a1a (ENSHCOG00000001676) nr5a1a (ENSHCOG00000001682) ENSHCOG00000001690 ENSHCOG00000001694 ##22 lhx2b (ENSHCOG00000001700) ENSHCOG00000001723 ENSHCOG00000001740 ENSHCOG00000001744 ENSHCOG00000001748 ENSHCOG00000001755 ENSHCOG00000001760 ccn1l2 (ENSHCOG00000001770) zgc:64051 (ENSHCOG00000001777) araf (ENSHCOG00000001790) imp4 (ENSHCOG00000001797) RABL6 (ENSHCOG00000001802) ENSHCOG00000001803 sub1b (ENSHCOG00000001809) ENSHCOG00000001816 Tiger tail seahorse MODERN SPECIES 208 MTSS1 (ENSHCOG00000010969) mal2 (ENSHCOG00000010975) ENSHCOG00000010989 ENSHCOG00000010997 COLEC10 (ENSHCOG00000011065) TNFRSF11B (ENSHCOG00000011118) ENSHCOG00000011138 CARMIL1 (ENSHCOG00000011155) scgn (ENSHCOG00000011179) CCN3 (ENSHCOG00000011418) sntb1 (ENSHCOG00000011459) ENSHCOG00000011582 ENSHCOG00000011612 #37 ENSHCOG00000011623 #14 ndrg1b (ENSHCOG00000011633) ENSHCOG00000011686 ##22 ENSHCOG00000011697 CLPTM1L (ENSHCOG00000000747) ENSHCOG00000011769 MRS2 (ENSHCOG00000011796) ENSHCOG00000011808 ENSHCOG00000011825 CLEC3B (ENSHCOG00000011832) cdcp1a (ENSHCOG00000011848) lars2 (ENSHCOG00000011897) LIMD1 (ENSHCOG00000011905) deptor (ENSHCOG00000011939) COL14A1 (ENSHCOG00000012016) mrpl13 (ENSHCOG00000012037) dscc1 (ENSHCOG00000012057) CPQ (ENSHCOG00000012071) Percomorphaceae_B ANCESTRAL SPECIES 1 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Ovalentaria ANCESTRAL SPECIES 3 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Ovalentaria_B ANCESTRAL SPECIES 1 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Cichlidae ANCESTRAL SPECIES 26 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000178893 ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Midas cichlid MODERN SPECIES 1213 mal2 (ENSACIG00000012643) ENSACIG00000012630 ENSACIG00000012528 ENSACIG00000012483 ENSACIG00000012469 ENSACIG00000012448 CARMIL1 (ENSACIG00000012371) scgn (ENSACIG00000012331) CCN3 (ENSACIG00000012172) ENSACIG00000012146 sntb1 (ENSACIG00000012120) ENSACIG00000012032 ZFAT (ENSACIG00000011878) #37 PTP4A3 (ENSACIG00000011864) #14 ndrg1b (ENSACIG00000011308) ENSACIG00000011223 ##22 ENSACIG00000011214 ENSACIG00000011184 MRS2 (ENSACIG00000011167) ENSACIG00000011156 CPQ (ENSACIG00000011136) dscc1 (ENSACIG00000011121) mrpl13 (ENSACIG00000011101) COL14A1 (ENSACIG00000011027) deptor (ENSACIG00000011002) LIMD1 (ENSACIG00000010949) lars2 (ENSACIG00000010901) TMEM158 (ENSACIG00000010880) cdcp1a (ENSACIG00000010859) CLEC3B (ENSACIG00000010837) ENSACIG00000010812 Pseudocrenilabrinae ANCESTRAL SPECIES 2 ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000178893 ENSGT00940000155167.b.a.a.o ENSGT00940000155167.b.a.a.p ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b.d ENSGT00390000010209.c.b.c ENSGT00950000183186.B.b.c Nile tilapia MODERN SPECIES 2 si:ch211-93i7.4 (ENSONIG00000007048) TNFRSF11B (ENSONIG00000007044) ENSONIG00000037567 ENSONIG00000040747 ENSONIG00000028296 ENSONIG00000007042 CARMIL1 (ENSONIG00000007027) scgn (ENSONIG00000007024) CCN3 (ENSONIG00000007020) ENSONIG00000007019 sntb1 (ENSONIG00000007016) ENSONIG00000007013 ENSONIG00000007011 #37 PTP4A3 (ENSONIG00000006856) #14 ndrg1b (ENSONIG00000006850) ENSONIG00000006838 ##22 ENSONIG00000039329 ENSONIG00000006834 MRS2 (ENSONIG00000006832) ENSONIG00000032537 CPQ (ENSONIG00000006829) dscc1 (ENSONIG00000006827) mrpl13 (ENSONIG00000037652) COL14A1 (ENSONIG00000006815) deptor (ENSONIG00000006812) LIMD1 (ENSONIG00000035860) lars2 (ENSONIG00000006802) TMEM158 (ENSONIG00000041619) ENSONIG00000030470 ENSONIG00000042157 cdcp1a (ENSONIG00000006800) Pseudocrenilabrinae_A ANCESTRAL SPECIES 1 ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000178893 ENSGT00940000155167.b.a.a.o ENSGT00940000155167.b.a.a.p ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b.d ENSGT00390000010209.c.b.c ENSGT00950000183186.B.b.c Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 331 si:ch211-93i7.4 (ENSNBRG00000019931) TNFRSF11B (ENSNBRG00000019947) ENSNBRG00000020004 ENSNBRG00000020042 CARMIL1 (ENSNBRG00000020057) scgn (ENSNBRG00000020188) CCN3 (ENSNBRG00000020277) ENSNBRG00000020519 sntb1 (ENSNBRG00000020529) ENSNBRG00000020565 ENSNBRG00000020616 #37 PTP4A3 (ENSNBRG00000020695) #14 ndrg1b (ENSNBRG00000020757) ENSNBRG00000020942 #22 ENSNBRG00000020964 ##22 ENSNBRG00000020979 ##22 ENSNBRG00000021124 MRS2 (ENSNBRG00000021882) ENSNBRG00000021901 CPQ (ENSNBRG00000021915) dscc1 (ENSNBRG00000021943) mrpl13 (ENSNBRG00000021965) COL14A1 (ENSNBRG00000022015) deptor (ENSNBRG00000022094) LIMD1 (ENSNBRG00000022129) lars2 (ENSNBRG00000022165) TMEM158 (ENSNBRG00000022207) cdcp1a (ENSNBRG00000022216) ENSNBRG00000022232 ENSNBRG00000022249 CEP85 (ENSNBRG00000022276) Lyretail cichlid MODERN SPECIES 331 mal2 (ENSNBRG00000019909) si:ch211-93i7.4 (ENSNBRG00000019931) TNFRSF11B (ENSNBRG00000019947) ENSNBRG00000020004 ENSNBRG00000020042 CARMIL1 (ENSNBRG00000020057) scgn (ENSNBRG00000020188) CCN3 (ENSNBRG00000020277) ENSNBRG00000020519 sntb1 (ENSNBRG00000020529) ENSNBRG00000020565 ENSNBRG00000020616 #37 PTP4A3 (ENSNBRG00000020695) #14 ndrg1b (ENSNBRG00000020757) ENSNBRG00000020942 #22 ENSNBRG00000020964 ##22 ENSNBRG00000020979 ##22 ENSNBRG00000021124 MRS2 (ENSNBRG00000021882) ENSNBRG00000021901 CPQ (ENSNBRG00000021915) dscc1 (ENSNBRG00000021943) mrpl13 (ENSNBRG00000021965) COL14A1 (ENSNBRG00000022015) deptor (ENSNBRG00000022094) LIMD1 (ENSNBRG00000022129) lars2 (ENSNBRG00000022165) TMEM158 (ENSNBRG00000022207) cdcp1a (ENSNBRG00000022216) ENSNBRG00000022232 ENSNBRG00000022249 Haplochromini ANCESTRAL SPECIES 24 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000178893 ENSGT00940000155167.b.a.a.o ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b.d ENSGT00390000010209.c.b.c ENSGT00950000183186.B.b.c Burton s mouthbrooder MODERN SPECIES 446 MTSS1 (ENSHBUG00000011382) mal2 (ENSHBUG00000011415) si:ch211-93i7.4 (ENSHBUG00000011431) TNFRSF11B (ENSHBUG00000000308) ENSHBUG00000011445 ENSHBUG00000011521 CARMIL1 (ENSHBUG00000011787) scgn (ENSHBUG00000011832) CCN3 (ENSHBUG00000011844) ENSHBUG00000011853 sntb1 (ENSHBUG00000011900) ENSHBUG00000011919 ENSHBUG00000011937 #37 PTP4A3 (ENSHBUG00000011967) #14 ndrg1b (ENSHBUG00000012032) ENSHBUG00000012132 ##22 ENSHBUG00000012140 ENSHBUG00000012151 MRS2 (ENSHBUG00000012163) ENSHBUG00000012167 CPQ (ENSHBUG00000012198) dscc1 (ENSHBUG00000012228) mrpl13 (ENSHBUG00000012259) COL14A1 (ENSHBUG00000013799) ENSHBUG00000013873 deptor (ENSHBUG00000013888) LIMD1 (ENSHBUG00000013922) lars2 (ENSHBUG00000014070) TMEM158 (ENSHBUG00000014093) Haplochromini_A ANCESTRAL SPECIES 30 ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a.o ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b.d ENSGT00390000010209.c.b.c ENSGT00950000183186.B.b.c Haplochromini_B ANCESTRAL SPECIES 50 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a.o.c ENSGT00940000155167.b.a.a.o.d ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b.d.b ENSGT00390000010209.c.b.d.a ENSGT00390000010209.c.b.c Eastern happy MODERN SPECIES 2 mal2 (ENSACLG00000013562) si:ch211-93i7.4 (ENSACLG00000013556) TNFRSF11B (ENSACLG00000013549) ENSACLG00000013501 ENSACLG00000013493 CARMIL1 (ENSACLG00000013467) scgn (ENSACLG00000013447) ENSACLG00000013444 CCN3 (ENSACLG00000013439) ENSACLG00000013437 sntb1 (ENSACLG00000013426) ENSACLG00000013413 ENSACLG00000013397 #37 PTP4A3 (ENSACLG00000013391) #14 ndrg1b (ENSACLG00000013370) ENSACLG00000013325 ##22 ENSACLG00000013321 ENSACLG00000013307 ENSACLG00000013288 MRS2 (ENSACLG00000013272) ENSACLG00000013261 CPQ (ENSACLG00000013235) dscc1 (ENSACLG00000013216) mrpl13 (ENSACLG00000013200) COL14A1 (ENSACLG00000013132) deptor (ENSACLG00000013080) LIMD1 (ENSACLG00000013073) lars2 (ENSACLG00000013037) TMEM158 (ENSACLG00000013026) ENSACLG00000013023 cdcp1a (ENSACLG00000013008) Zebra mbuna MODERN SPECIES 1093 MTSS1 (ENSMZEG00005025607) mal2 (ENSMZEG00005025602) si:ch211-93i7.4 (ENSMZEG00005025598) TNFRSF11B (ENSMZEG00005025593) ENSMZEG00005025590 ENSMZEG00005025584 CARMIL1 (ENSMZEG00005025572) scgn (ENSMZEG00005025566) CCN3 (ENSMZEG00005025563) ENSMZEG00005025560 sntb1 (ENSMZEG00005025556) ENSMZEG00005025550 ENSMZEG00005025547 #37 PTP4A3 (ENSMZEG00005025545) #14 ndrg1b (ENSMZEG00005025541) ENSMZEG00005025519 ##22 ENSMZEG00005025538 ENSMZEG00005025515 ENSMZEG00005025513 MRS2 (ENSMZEG00005025510) ENSMZEG00005025508 CPQ (ENSMZEG00005025505) dscc1 (ENSMZEG00005025503) mrpl13 (ENSMZEG00005025500) ENSMZEG00005025498 ENSMZEG00005025497 COL14A1 (ENSMZEG00005025495) ptprub (ENSMZEG00005025494) ENSMZEG00005025493 ENSMZEG00005025491 ENSMZEG00005025488 P. nyererei DUPLICATION P. nyererei MODERN SPECIES 439 ENSPNYG00000002738 CARMIL1 (ENSPNYG00000002762) scgn (ENSPNYG00000002890) CCN3 (ENSPNYG00000002973) ENSPNYG00000003314 sntb1 (ENSPNYG00000003327) ENSPNYG00000003339 ENSPNYG00000003441 #37 PTP4A3 (ENSPNYG00000003759) #14 ndrg1b (ENSPNYG00000003846) ENSPNYG00000004202 ##22 ENSPNYG00000004359 ##22 ENSPNYG00000004426 ENSPNYG00000004453 MRS2 (ENSPNYG00000004586) ENSPNYG00000004600 CPQ (ENSPNYG00000004611) dscc1 (ENSPNYG00000004640) mrpl13 (ENSPNYG00000004669) COL14A1 (ENSPNYG00000004711) deptor (ENSPNYG00000004816) LIMD1 (ENSPNYG00000004825) lars2 (ENSPNYG00000004846) TMEM158 (ENSPNYG00000004927) cdcp1a (ENSPNYG00000004940) CLEC3B (ENSPNYG00000004958) P. nyererei MODERN SPECIES 439 ENSPNYG00000002738 CARMIL1 (ENSPNYG00000002762) scgn (ENSPNYG00000002890) CCN3 (ENSPNYG00000002973) ENSPNYG00000003314 sntb1 (ENSPNYG00000003327) ENSPNYG00000003339 ENSPNYG00000003441 #37 PTP4A3 (ENSPNYG00000003759) #14 ndrg1b (ENSPNYG00000003846) ENSPNYG00000004202 ##22 ENSPNYG00000004359 ##22 ENSPNYG00000004426 ENSPNYG00000004453 MRS2 (ENSPNYG00000004586) ENSPNYG00000004600 CPQ (ENSPNYG00000004611) dscc1 (ENSPNYG00000004640) mrpl13 (ENSPNYG00000004669) COL14A1 (ENSPNYG00000004711) deptor (ENSPNYG00000004816) LIMD1 (ENSPNYG00000004825) lars2 (ENSPNYG00000004846) TMEM158 (ENSPNYG00000004927) cdcp1a (ENSPNYG00000004940) CLEC3B (ENSPNYG00000004958) ENSPNYG00000004967 Pomacentridae ANCESTRAL SPECIES 23 ENSGT00940000159514 ENSGT01020000230338.a.b.a.f.a ENSGT01020000230338.a.b.a.f.b ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Pomacentridae_A ANCESTRAL SPECIES 6 ENSGT00940000159514 ENSGT01020000230338.a.b.a.f.a ENSGT01020000230338.a.b.a.f.b ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Amphiprion ANCESTRAL SPECIES 54 ENSGT00940000159514 ENSGT01020000230338.a.b.a.f.a ENSGT01020000230338.a.b.a.f.b ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Clown anemonefish MODERN SPECIES 1865 ENSAOCG00000014726 sntb1 (ENSAOCG00000014712) ENSAOCG00000014655 ENSAOCG00000014629 #37 ENSAOCG00000014597 #14 ENSAOCG00000000945 ENSAOCG00000013788 ##22 CLPTM1L (ENSAOCG00000013552) MRS2 (ENSAOCG00000013450) Orange clownfish MODERN SPECIES 21 mal2 (ENSAPEG00000014548) ENSAPEG00000014538 ENSAPEG00000014525 si:ch211-93i7.4 (ENSAPEG00000014515) TNFRSF11B (ENSAPEG00000014503) ENSAPEG00000014480 CARMIL1 (ENSAPEG00000014382) scgn (ENSAPEG00000014286) CCN3 (ENSAPEG00000014256) ENSAPEG00000014245 sntb1 (ENSAPEG00000014184) ENSAPEG00000014032 ENSAPEG00000013945 #37 ENSAPEG00000013902 #14 ENSAPEG00000013880 ENSAPEG00000013611 ##22 ENSAPEG00000013568 CLPTM1L (ENSAPEG00000013476) MRS2 (ENSAPEG00000013454) ENSAPEG00000013442 ENSAPEG00000013429 ENSAPEG00000013372 ENSAPEG00000013346 syt11b (ENSAPEG00000013316) plin6 (ENSAPEG00000013264) zgc:171704 (ENSAPEG00000013239) ENSAPEG00000013227 ENSAPEG00000013216 KCNV1 (ENSAPEG00000013203) gbp (ENSAPEG00000013176) ENSAPEG00000013136 Spiny chromis MODERN SPECIES 1129 ENSAPOG00000011012 ENSAPOG00000011002 #37 PTP4A3 (ENSAPOG00000010976) #14 ENSAPOG00000010908 ENSAPOG00000010326 ##22 CLPTM1L (ENSAPOG00000010150) ENSAPOG00000010123 Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 1441 ENSSPAG00000002845 ENSSPAG00000002828 #37 PTP4A3 (ENSSPAG00000002797) #14 ENSSPAG00000002749 ENSSPAG00000002665 ##22 ENSSPAG00000002640 ENSSPAG00000002621 ##22 ENSSPAG00000002607 ENSSPAG00000002501 Bicolor damselfish MODERN SPECIES 1441 ENSSPAG00000002845 ENSSPAG00000002828 #37 PTP4A3 (ENSSPAG00000002797) #14 ENSSPAG00000002749 ENSSPAG00000002665 ##22 ENSSPAG00000002640 ENSSPAG00000002621 ##22 ENSSPAG00000002607 ENSSPAG00000002501 Atherinomorphae ANCESTRAL SPECIES ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Oryzias ANCESTRAL SPECIES 2 ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019.l ENSGT00390000015114 ENSGT00390000009719 ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b ENSGT00520000055567.b ENSGT00620000087993.a.b Oryzias_b ANCESTRAL SPECIES 1 ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019.l ENSGT00390000015114 ENSGT00390000009719 ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b ENSGT00520000055567.b ENSGT00620000087993.a.b Indian medaka MODERN SPECIES 5 TMEM65 (ENSOMEG00000013323) MTSS1 (ENSOMEG00000013271) mal2 (ENSOMEG00000013151) si:ch211-93i7.4 (ENSOMEG00000013125) TNFRSF11B (ENSOMEG00000013112) ENSOMEG00000013098 ENSOMEG00000013077 CARMIL1 (ENSOMEG00000013048) scgn (ENSOMEG00000013000) CCN3 (ENSOMEG00000012898) sntb1 (ENSOMEG00000012675) ENSOMEG00000012611 ENSOMEG00000012557 #37 ENSOMEG00000012484 #14 ndrg1b (ENSOMEG00000012420) ENSOMEG00000012259 ##22 ENSOMEG00000011904 MRS2 (ENSOMEG00000011853) ENSOMEG00000011802 ENSOMEG00000011783 dscc1 (ENSOMEG00000011757) mrpl13 (ENSOMEG00000011732) COL14A1 (ENSOMEG00000011696) deptor (ENSOMEG00000011556) LIMD1 (ENSOMEG00000011521) lars2 (ENSOMEG00000011491) TMEM158 (ENSOMEG00000011417) CLEC3B (ENSOMEG00000011407) ENSOMEG00000011391 ENSOMEG00000011378 CEP85 (ENSOMEG00000011339) Javanese ricefish MODERN SPECIES 7 mboat1 (ENSOJAG00000018014) TMEM65 (ENSOJAG00000018004) MTSS1 (ENSOJAG00000017957) mal2 (ENSOJAG00000017944) si:ch211-93i7.4 (ENSOJAG00000017933) ENSOJAG00000017914 ENSOJAG00000017901 CARMIL1 (ENSOJAG00000016246) scgn (ENSOJAG00000016099) CCN3 (ENSOJAG00000016093) sntb1 (ENSOJAG00000015985) ENSOJAG00000015971 ENSOJAG00000015824 #37 ENSOJAG00000015809 #14 ndrg1b (ENSOJAG00000015527) ENSOJAG00000010756 ##22 ENSOJAG00000010177 MRS2 (ENSOJAG00000009982) ENSOJAG00000009966 CPQ (ENSOJAG00000009529) dscc1 (ENSOJAG00000009392) mrpl13 (ENSOJAG00000009285) COL14A1 (ENSOJAG00000007654) deptor (ENSOJAG00000007415) LIMD1 (ENSOJAG00000007396) lars2 (ENSOJAG00000019013) TMEM158 (ENSOJAG00000018976) CLEC3B (ENSOJAG00000018912) ENSOJAG00000018868 ENSOJAG00000018856 CEP85 (ENSOJAG00000018845) Oryzias_a ANCESTRAL SPECIES 9 ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019.l ENSGT00390000015114 ENSGT00390000009719 ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b ENSGT00620000087993.a.b ENSGT00950000182900.B Japanese Medaka HdrR MODERN SPECIES 7 ENSORLG00000004920 TNFRSF11B (ENSORLG00000004915) opgb (ENSORLG00000004902) ENSORLG00000028861 ENSORLG00000025825 ENSORLG00000004892 ENSORLG00000004844 CCN3 (ENSORLG00000029702) ENSORLG00000025758 ENSORLG00000025100 sntb1 (ENSORLG00000022473) ENSORLG00000004821 ENSORLG00000004805 #37 ENSORLG00000004793 #14 ENSORLG00000004785 ENSORLG00000004751 ##22 CLPTM1L (ENSORLG00000004721) MRS2 (ENSORLG00000004699) ENSORLG00000024891 CPQ (ENSORLG00000004684) dscc1 (ENSORLG00000004660) mrpl13 (ENSORLG00000004647) ENSORLG00000004631 deptor (ENSORLG00000004604) LIMD1 (ENSORLG00000004582) lars2 (ENSORLG00000004574) ENSORLG00000023875 TMEM158 (ENSORLG00000004555) CLEC3B (ENSORLG00000028179) ENSORLG00000004544 CEP85 (ENSORLG00000004532) Chinese medaka MODERN SPECIES 205 CARMIL1 (ENSOSIG00000022255) sntb1 (ENSOSIG00000022289) ENSOSIG00000022290 ENSOSIG00000022296 ENSOSIG00000022299 #37 ENSOSIG00000022306 #14 ndrg1b (ENSOSIG00000022331) ENSOSIG00000022432 ##22 CLPTM1L (ENSOSIG00000022706) MRS2 (ENSOSIG00000022719) ENSOSIG00000022720 CPQ (ENSOSIG00000022731) dscc1 (ENSOSIG00000022753) mrpl13 (ENSOSIG00000022757) COL14A1 (ENSOSIG00000022839) ENSOSIG00000022884 deptor (ENSOSIG00000022887) Cyprinodontiformes ANCESTRAL SPECIES ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Aplocheiloidei ANCESTRAL SPECIES 26 ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n Mangrove rivulus MODERN SPECIES 14 mboat1 (ENSKMAG00000019402) TMEM65 (ENSKMAG00000019384) MTSS1 (ENSKMAG00000019293) mal2 (ENSKMAG00000019257) ENSKMAG00000019246 TNFRSF11B (ENSKMAG00000019227) ENSKMAG00000019202 CARMIL1 (ENSKMAG00000019103) scgn (ENSKMAG00000019038) CCN3 (ENSKMAG00000018904) ENSKMAG00000018873 sntb1 (ENSKMAG00000018846) ENSKMAG00000018808 #37 PTP4A3 (ENSKMAG00000018768) #14 ndrg1b (ENSKMAG00000018710) ENSKMAG00000018338 ##22 ENSKMAG00000018242 ENSKMAG00000018211 MRS2 (ENSKMAG00000018186) ENSKMAG00000018172 CPQ (ENSKMAG00000018148) dscc1 (ENSKMAG00000018118) mrpl13 (ENSKMAG00000018091) COL14A1 (ENSKMAG00000018028) Cyprinodontoidei ANCESTRAL SPECIES ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b.b ENSGT01040000240400.c.b.a.a.a.b.a ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Poeciliinae ANCESTRAL SPECIES 22 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b.b ENSGT01040000240400.c.b.a.a.a.b.a ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667.j ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Platyfish MODERN SPECIES 17 MTSS1 (ENSXMAG00000009708) mal2 (ENSXMAG00000009738) si:ch211-93i7.4 (ENSXMAG00000009740) TNFRSF11B (ENSXMAG00000021500) ENSXMAG00000009762 CARMIL1 (ENSXMAG00000007106) scgn (ENSXMAG00000007126) CCN3 (ENSXMAG00000027667) ENSXMAG00000025094 ENSXMAG00000022539 sntb1 (ENSXMAG00000011008) ENSXMAG00000010999 ENSXMAG00000010993 #37 ENSXMAG00000018281 #14 ndrg1b (ENSXMAG00000010969) ENSXMAG00000010911 ##22 ENSXMAG00000010909 ENSXMAG00000030035 MRS2 (ENSXMAG00000010869) ENSXMAG00000022167 CPQ (ENSXMAG00000010857) dscc1 (ENSXMAG00000010847) mrpl13 (ENSXMAG00000010846) COL14A1 (ENSXMAG00000010834) deptor (ENSXMAG00000010825) LIMD1 (ENSXMAG00000010818) lars2 (ENSXMAG00000010803) TMEM158 (ENSXMAG00000022005) CLEC3B (ENSXMAG00000010802) ENSXMAG00000010800 ENSXMAG00000023555 Poecilia ANCESTRAL SPECIES ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b.b ENSGT01040000240400.c.b.a.a.a.b.a ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667.j ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b NAME_6 ANCESTRAL SPECIES 197 ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b.b ENSGT01040000240400.c.b.a.a.a.b.a ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667.j ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b Sailfin molly MODERN SPECIES 1165 ENSPLAG00000015147 scgn (ENSPLAG00000015091) CCN3 (ENSPLAG00000014885) ENSPLAG00000014316 ENSPLAG00000014307 sntb1 (ENSPLAG00000014300) ENSPLAG00000014264 ENSPLAG00000000586 #37 ENSPLAG00000014242 #14 ndrg1b (ENSPLAG00000014204) ENSPLAG00000014005 ##22 ENSPLAG00000013880 ENSPLAG00000013853 MRS2 (ENSPLAG00000013732) ENSPLAG00000013724 CPQ (ENSPLAG00000013715) dscc1 (ENSPLAG00000013703) mrpl13 (ENSPLAG00000013671) Amazon molly MODERN SPECIES 523 COLEC10 (ENSPFOG00000008388) TNFRSF11B (ENSPFOG00000008474) ENSPFOG00000008555 TNFRSF11B (ENSPFOG00000022852) ENSPFOG00000008573 CARMIL1 (ENSPFOG00000008604) scgn (ENSPFOG00000009307) CCN3 (ENSPFOG00000009446) ENSPFOG00000022169 ENSPFOG00000024134 sntb1 (ENSPFOG00000009607) ENSPFOG00000009740 ENSPFOG00000009919 #37 ENSPFOG00000010038 #14 ndrg1b (ENSPFOG00000010083) ENSPFOG00000010090 ##22 ENSPFOG00000010095 ENSPFOG00000010111 MRS2 (ENSPFOG00000010268) ENSPFOG00000010425 ENSPFOG00000021703 CPQ (ENSPFOG00000010434) dscc1 (ENSPFOG00000010560) mrpl13 (ENSPFOG00000010630) COL14A1 (ENSPFOG00000010698) deptor (ENSPFOG00000011294) deptor (ENSPFOG00000011332) LIMD1 (ENSPFOG00000011498) lars2 (ENSPFOG00000011593) TMEM158 (ENSPFOG00000022083) ENSPFOG00000011877 Guppy MODERN SPECIES 446 MTSS1 (ENSPREG00000010677) mal2 (ENSPREG00000010576) ENSPREG00000010482 TNFRSF11B (ENSPREG00000010400) ENSPREG00000010374 CARMIL1 (ENSPREG00000010301) scgn (ENSPREG00000010277) ENSPREG00000010273 CCN3 (ENSPREG00000010039) ENSPREG00000009995 sntb1 (ENSPREG00000009976) ENSPREG00000009877 ZFAT (ENSPREG00000009790) #37 ENSPREG00000009772 #14 ndrg1b (ENSPREG00000009752) ENSPREG00000009701 ##22 ENSPREG00000009684 ENSPREG00000009608 MRS2 (ENSPREG00000009590) ENSPREG00000009583 CPQ (ENSPREG00000009554) dscc1 (ENSPREG00000009531) mrpl13 (ENSPREG00000009510) COL14A1 (ENSPREG00000009434) deptor (ENSPREG00000009382) LIMD1 (ENSPREG00000009359) lars2 (ENSPREG00000009319) TMEM158 (ENSPREG00000009299) ENSPREG00000009288 CLEC3B (ENSPREG00000009257) ENSPREG00000009238 NAME_4 ANCESTRAL SPECIES 86 ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Sheepshead minnow MODERN SPECIES 333 sntb1 (ENSCVAG00000019231) ENSCVAG00000019256 ENSCVAG00000019277 #37 PTP4A3 (ENSCVAG00000019341) #14 ndrg1b (ENSCVAG00000019353) ENSCVAG00000019438 ##22 ENSCVAG00000019448 ENSCVAG00000019489 MRS2 (ENSCVAG00000019496) ENSCVAG00000019505 CPQ (ENSCVAG00000019539) dscc1 (ENSCVAG00000019580) mrpl13 (ENSCVAG00000019608) COL14A1 (ENSCVAG00000019722) deptor (ENSCVAG00000019760) LIMD1 (ENSCVAG00000019769) lars2 (ENSCVAG00000019899) TMEM158 (ENSCVAG00000019910) CLEC3B (ENSCVAG00000019917) ENSCVAG00000019948 ENSCVAG00000019975 Mummichog MODERN SPECIES 612 sntb1 (ENSFHEG00000003427) ENSFHEG00000003445 ENSFHEG00000003509 #37 PTP4A3 (ENSFHEG00000003531) #14 ndrg1b (ENSFHEG00000003565) ENSFHEG00000003850 ##22 ENSFHEG00000003898 ENSFHEG00000003946 MRS2 (ENSFHEG00000003960) Percomorphaceae_C ANCESTRAL SPECIES 2 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Percomorphaceae_D ANCESTRAL SPECIES 2 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Anabantaria ANCESTRAL SPECIES 2 ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Anabantoidei ANCESTRAL SPECIES 3 ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Climbing perch MODERN SPECIES 7 ENSATEG00000024064 MAL2 (ENSATEG00000024059) ENSATEG00000024057 ENSATEG00000024053 TNFRSF11B (ENSATEG00000024050) ENSATEG00000024046 ENSATEG00000024023 ENSATEG00000024010 ENSATEG00000024003 ENSATEG00000024001 ENSATEG00000023994 ENSATEG00000023980 ENSATEG00000023974 #37 ENSATEG00000023965 #14 ENSATEG00000023959 ENSATEG00000023925 ##22 ENSATEG00000023908 ENSATEG00000023901 ENSATEG00000023896 ENSATEG00000028035 ENSATEG00000023892 ENSATEG00000023887 mrpl13 (ENSATEG00000028244) ENSATEG00000023876 deptor (ENSATEG00000023870) ENSATEG00000030019 lars2 (ENSATEG00000023835) TMEM158 (ENSATEG00000023829) cdcp1a (ENSATEG00000023823) CLEC3B (ENSATEG00000028357) ENSATEG00000023812 Siamese fighting fish MODERN SPECIES 7 ENSBSLG00000017334 MTSS1 (ENSBSLG00000016789) mal2 (ENSBSLG00000016628) si:ch211-93i7.4 (ENSBSLG00000016597) TNFRSF11B (ENSBSLG00000015636) ENSBSLG00000015630 CARMIL1 (ENSBSLG00000014631) scgn (ENSBSLG00000014553) CCN3 (ENSBSLG00000014184) ENSBSLG00000014147 sntb1 (ENSBSLG00000014136) ENSBSLG00000026082 ENSBSLG00000026018 #37 PTP4A3 (ENSBSLG00000025965) #14 ndrg1b (ENSBSLG00000025549) ENSBSLG00000024186 ##22 ENSBSLG00000023993 MRS2 (ENSBSLG00000023966) ENSBSLG00000023957 CPQ (ENSBSLG00000023912) dscc1 (ENSBSLG00000023885) mrpl13 (ENSBSLG00000023852) COL14A1 (ENSBSLG00000023534) deptor (ENSBSLG00000023466) LIMD1 (ENSBSLG00000023356) lars2 (ENSBSLG00000022914) cdcp1a (ENSBSLG00000022565) ENSBSLG00000022563 CLEC3B (ENSBSLG00000022556) ENSBSLG00000022435 ENSBSLG00000022408 Zig-zag eel MODERN SPECIES 7 TMEM65 (ENSMAMG00000025377) ENSMAMG00000024012 MAL2 (ENSMAMG00000024467) ENSMAMG00000026125 TNFRSF11B (ENSMAMG00000024009) ENSMAMG00000024008 ENSMAMG00000024007 ENSMAMG00000024006 ENSMAMG00000024005 ENSMAMG00000026078 ENSMAMG00000024003 ENSMAMG00000024002 ENSMAMG00000024001 #37 ENSMAMG00000025894 #14 ENSMAMG00000023999 ENSMAMG00000023998 ##22 ENSMAMG00000023997 ENSMAMG00000023996 ENSMAMG00000023995 ENSMAMG00000023994 ENSMAMG00000023992 mrpl13 (ENSMAMG00000023991) ENSMAMG00000023990 deptor (ENSMAMG00000023989) LIMD1 (ENSMAMG00000023988) lars2 (ENSMAMG00000023987) TMEM158 (ENSMAMG00000023986) cdcp1a (ENSMAMG00000023984) CLEC3B (ENSMAMG00000023985) ENSMAMG00000023983 ENSMAMG00000023982 Carangaria ANCESTRAL SPECIES 1 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Pleuronectoidei ANCESTRAL SPECIES 3 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Tongue sole MODERN SPECIES 4 ENSCSEG00000005234 ENSCSEG00000005225 CLEC3B (ENSCSEG00000005231) cdcp1a (ENSCSEG00000005216) TMEM158 (ENSCSEG00000005214) lars2 (ENSCSEG00000005202) LIMD1 (ENSCSEG00000005191) deptor (ENSCSEG00000005169) COL14A1 (ENSCSEG00000005157) ENSCSEG00000005153 sntb1 (ENSCSEG00000005142) ENSCSEG00000005134 ENSCSEG00000005115 #37 ENSCSEG00000005099 #14 ndrg1b (ENSCSEG00000005092) ENSCSEG00000005078 ##22 ENSCSEG00000005074 CLPTM1L (ENSCSEG00000005062) MRS2 (ENSCSEG00000005059) ENSCSEG00000005055 CPQ (ENSCSEG00000005044) dscc1 (ENSCSEG00000005030) mrpl13 (ENSCSEG00000005024) FHOD3 (ENSCSEG00000005007) slc6a19b (ENSCSEG00000004999) ENSCSEG00000004998 ENSCSEG00000004997 ENSCSEG00000004986 ENSCSEG00000004949 sp8b (ENSCSEG00000004940) macc1 (ENSCSEG00000004928) Turbot MODERN SPECIES ENSSMAG00000003409 MAL2 (ENSSMAG00000032230) ENSSMAG00000003386 ENSSMAG00000003375 TNFRSF11B (ENSSMAG00000003343) ENSSMAG00000003338 ENSSMAG00000003265 ENSSMAG00000003216 ENSSMAG00000024100 ENSSMAG00000003199 ENSSMAG00000003162 ENSSMAG00000003140 ENSSMAG00000003093 #37 ENSSMAG00000003059 #14 ENSSMAG00000003027 ENSSMAG00000002721 ##22 ENSSMAG00000002665 ENSSMAG00000002646 ENSSMAG00000035925 ENSSMAG00000002628 ENSSMAG00000002622 ENSSMAG00000002602 ENSSMAG00000002581 mrpl13 (ENSSMAG00000002558) ENSSMAG00000002502 deptor (ENSSMAG00000002445) LIMD1 (ENSSMAG00000002424) lars2 (ENSSMAG00000002353) TMEM158 (ENSSMAG00000026497) cdcp1a (ENSSMAG00000002303) CLEC3B (ENSSMAG00000002297) Carangaria_A ANCESTRAL SPECIES 9 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Barramundi perch MODERN SPECIES 17 ENSLCAG00010001892 ENSLCAG00010001895 si:ch211-93i7.4 (ENSLCAG00010001901) TNFRSF11B (ENSLCAG00010001905) ENSLCAG00010001912 CARMIL1 (ENSLCAG00010002103) scgn (ENSLCAG00010002706) CCN3 (ENSLCAG00010002715) ENSLCAG00010002719 ENSLCAG00010002721 sntb1 (ENSLCAG00010002724) ENSLCAG00010002726 ZFAT (ENSLCAG00010002738) #37 PTP4A3 (ENSLCAG00010002761) #14 ENSLCAG00010002773 ENSLCAG00010003085 ##22 ENSLCAG00010004567 CLPTM1L (ENSLCAG00010004569) MRS2 (ENSLCAG00010004575) ENSLCAG00010004584 ENSLCAG00010004590 CPQ (ENSLCAG00010004593) dscc1 (ENSLCAG00010004610) mrpl13 (ENSLCAG00010004616) COL14A1 (ENSLCAG00010004721) deptor (ENSLCAG00010005241) ENSLCAG00010005246 ENSLCAG00010005250 lars2 (ENSLCAG00010005379) TMEM158 (ENSLCAG00010005866) cdcp1a (ENSLCAG00010005869) Seriola ANCESTRAL SPECIES 16 ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00940000155356.d.b.b.b.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Greater amberjack MODERN SPECIES 75 mal2 (ENSSDUG00000015527) ENSSDUG00000015539 COLEC10 (ENSSDUG00000015548) TNFRSF11B (ENSSDUG00000015579) ENSSDUG00000015592 CARMIL1 (ENSSDUG00000015617) ENSSDUG00000015672 scgn (ENSSDUG00000015705) CCN3 (ENSSDUG00000015746) ENSSDUG00000015769 sntb1 (ENSSDUG00000015780) ENSSDUG00000015832 ENSSDUG00000015868 #37 PTP4A3 (ENSSDUG00000015910) #14 ndrg1b (ENSSDUG00000015947) ENSSDUG00000016275 ##22 ENSSDUG00000016341 CLPTM1L (ENSSDUG00000016354) MRS2 (ENSSDUG00000016372) ENSSDUG00000016394 CPQ (ENSSDUG00000016423) dscc1 (ENSSDUG00000016477) mrpl13 (ENSSDUG00000016507) COL14A1 (ENSSDUG00000016525) deptor (ENSSDUG00000016646) LIMD1 (ENSSDUG00000016680) lars2 (ENSSDUG00000016697) TMEM158 (ENSSDUG00000016762) cdcp1a (ENSSDUG00000016773) CLEC3B (ENSSDUG00000016813) ENSSDUG00000016827 Yellowtail amberjack MODERN SPECIES 2813 mal2 (ENSSLDG00000021927) ENSSLDG00000021932 COLEC10 (ENSSLDG00000021941) TNFRSF11B (ENSSLDG00000021949) ENSSLDG00000021956 CARMIL1 (ENSSLDG00000021966) ENSSLDG00000022078 scgn (ENSSLDG00000022085) CCN3 (ENSSLDG00000022098) ENSSLDG00000022116 sntb1 (ENSSLDG00000022129) ENSSLDG00000022154 ENSSLDG00000022185 #37 PTP4A3 (ENSSLDG00000022207) #14 ndrg1b (ENSSLDG00000022225) ENSSLDG00000022243 ##22 ENSSLDG00000022284 ENSSLDG00000022292 MRS2 (ENSSLDG00000022317) ENSSLDG00000022328 CPQ (ENSSLDG00000022351) dscc1 (ENSSLDG00000022374) mrpl13 (ENSSLDG00000022405) COL14A1 (ENSSLDG00000022438) Eupercaria ANCESTRAL SPECIES 1 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Tetraodontidae ANCESTRAL SPECIES 14 ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00940000163454.a.b ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c Fugu MODERN SPECIES 19 mboat1 (ENSTRUG00000008619) TMEM65 (ENSTRUG00000022028) MTSS1 (ENSTRUG00000009080) ENSTRUG00000009396 si:ch211-93i7.4 (ENSTRUG00000022660) ENSTRUG00000009463 ENSTRUG00000009552 CARMIL1 (ENSTRUG00000009574) scgn (ENSTRUG00000009987) CCN3 (ENSTRUG00000010104) sntb1 (ENSTRUG00000010268) ENSTRUG00000010534 ENSTRUG00000010724 #37 PTP4A3 (ENSTRUG00000010904) #14 ndrg1b (ENSTRUG00000010966) ENSTRUG00000011167 ##22 ENSTRUG00000032169 ENSTRUG00000028405 MRS2 (ENSTRUG00000011868) ENSTRUG00000011927 ENSTRUG00000012025 ENSTRUG00000030825 ENSTRUG00000020053 COL14A1 (ENSTRUG00000012345) deptor (ENSTRUG00000012469) LIMD1 (ENSTRUG00000025656) lars2 (ENSTRUG00000012513) TMEM158 (ENSTRUG00000023519) dnali1 (ENSTRUG00000012726) cdcp1a (ENSTRUG00000012734) CLEC3B (ENSTRUG00000012771) Tetraodon MODERN SPECIES 23 mboat1 (ENSTNIG00000009622) TMEM65 (ENSTNIG00000009623) MTSS1 (ENSTNIG00000009624) ENSTNIG00000009625 mal2 (ENSTNIG00000009626) ENSTNIG00000000468 ENSTNIG00000009627 CARMIL1 (ENSTNIG00000009628) scgn (ENSTNIG00000009629) CCN3 (ENSTNIG00000009630) sntb1 (ENSTNIG00000009631) ENSTNIG00000009632 ENSTNIG00000009633 #37 ENSTNIG00000009634 #14 ndrg1b (ENSTNIG00000009635) ENSTNIG00000009636 ##22 CLPTM1L (ENSTNIG00000009637) MRS2 (ENSTNIG00000009638) ENSTNIG00000009639 CPQ (ENSTNIG00000009640) ENSTNIG00000009641 dscc1 (ENSTNIG00000009642) mrpl13 (ENSTNIG00000009643) COL14A1 (ENSTNIG00000009644) deptor (ENSTNIG00000009645) LIMD1 (ENSTNIG00000009646) lars2 (ENSTNIG00000009647) cdcp1a (ENSTNIG00000001625) CLEC3B (ENSTNIG00000009648) ENSTNIG00000009649 CEP85 (ENSTNIG00000009650) Eupecaria_A ANCESTRAL SPECIES 2 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Eupecaria_B ANCESTRAL SPECIES 4 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Eupecaria_C ANCESTRAL SPECIES 2 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 2 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b European seabass MODERN SPECIES 6 ENSDLAG00005011289 MAL2 (ENSDLAG00005011274) ENSDLAG00005011265 ENSDLAG00005011253 TNFRSF11B (ENSDLAG00005033886) ENSDLAG00005010952 ENSDLAG00005010918 ENSDLAG00005010822 ENSDLAG00005031520 ENSDLAG00005010770 ENSDLAG00005031405 ENSDLAG00005010669 #37 ENSDLAG00005027731 ENSDLAG00005010647 #14 ENSDLAG00005010051 ENSDLAG00005009094 ##22 ENSDLAG00005029429 ENSDLAG00005009003 ENSDLAG00005008837 ENSDLAG00005008960 ENSDLAG00005033849 ENSDLAG00005008944 ENSDLAG00005008929 mrpl13 (ENSDLAG00005008859) ENSDLAG00005005702 ENSDLAG00005015521 ENSDLAG00005002727 deptor (ENSDLAG00005005578) LIMD1 (ENSDLAG00005005511) lars2 (ENSDLAG00005004900) TMEM158 (ENSDLAG00005004876) Large yellow croaker MODERN SPECIES 484 TMEM65 (ENSLCRG00005017317) MTSS1 (ENSLCRG00005017258) mal2 (ENSLCRG00005017206) ENSLCRG00005017205 si:ch211-93i7.4 (ENSLCRG00005017202) TNFRSF11B (ENSLCRG00005017197) ENSLCRG00005017195 CARMIL1 (ENSLCRG00005016523) scgn (ENSLCRG00005016481) CCN3 (ENSLCRG00005016470) ENSLCRG00005016465 sntb1 (ENSLCRG00005016459) ENSLCRG00005016397 ENSLCRG00005016375 #37 ENSLCRG00005016333 ENSLCRG00005007690 ##22 ENSLCRG00005006925 CLPTM1L (ENSLCRG00005006921) MRS2 (ENSLCRG00005006915) ENSLCRG00005006902 CPQ (ENSLCRG00005006832) dscc1 (ENSLCRG00005006815) mrpl13 (ENSLCRG00005006813) COL14A1 (ENSLCRG00005006535) deptor (ENSLCRG00005006448) LIMD1 (ENSLCRG00005006444) lars2 (ENSLCRG00005003551) TMEM158 (ENSLCRG00005003309) cdcp1a (ENSLCRG00005003299) CLEC3B (ENSLCRG00005003283) ENSLCRG00005003235 Gilthead seabream MODERN SPECIES 8 MTSS1 (ENSSAUG00010022012) mal2 (ENSSAUG00010022017) CD209 (ENSSAUG00010022018) ENSSAUG00010022020 TNFRSF11B (ENSSAUG00010022021) ENSSAUG00010022022 CARMIL1 (ENSSAUG00010022047) scgn (ENSSAUG00010001683) CCN3 (ENSSAUG00010001720) ENSSAUG00010001725 sntb1 (ENSSAUG00010001733) ENSSAUG00010001757 ENSSAUG00010001800 #37 PTP4A3 (ENSSAUG00010001830) #14 ENSSAUG00010001903 ENSSAUG00010003078 ##22 ENSSAUG00010012215 CLPTM1L (ENSSAUG00010012217) MRS2 (ENSSAUG00010012223) ENSSAUG00010012230 ENSSAUG00010012233 CPQ (ENSSAUG00010012241) ENSSAUG00010012385 dscc1 (ENSSAUG00010012389) mrpl13 (ENSSAUG00010012398) COL14A1 (ENSSAUG00010012438) deptor (ENSSAUG00010013418) ENSSAUG00010013421 LIMD1 (ENSSAUG00010013425) lars2 (ENSSAUG00010013465) TMEM158 (ENSSAUG00010014322) Perciformes ANCESTRAL SPECIES 3 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Perciformes_a ANCESTRAL SPECIES 3 ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b ENSGT00940000178119 ENSGT00520000055567.b Channel bull blenny MODERN SPECIES 7 TMEM65 (ENSCGOG00000017715) MTSS1 (ENSCGOG00000017359) mal2 (ENSCGOG00000017357) ENSCGOG00000017354 ENSCGOG00000017350 ENSCGOG00000017345 CARMIL1 (ENSCGOG00000015217) scgn (ENSCGOG00000015157) CCN3 (ENSCGOG00000015068) ENSCGOG00000015065 sntb1 (ENSCGOG00000015039) ENSCGOG00000015033 ENSCGOG00000015016 #37 PTP4A3 (ENSCGOG00000015000) #14 ndrg1b (ENSCGOG00000014867) ENSCGOG00000011777 ##22 CLPTM1L (ENSCGOG00000011685) MRS2 (ENSCGOG00000011642) ENSCGOG00000011638 CPQ (ENSCGOG00000011503) dscc1 (ENSCGOG00000011475) mrpl13 (ENSCGOG00000011451) COL14A1 (ENSCGOG00000010147) deptor (ENSCGOG00000010119) LIMD1 (ENSCGOG00000010070) lars2 (ENSCGOG00000009538) CLEC3B (ENSCGOG00000009511) FEZ2 (ENSCGOG00000009488) ENSCGOG00000009483 CEP85 (ENSCGOG00000009466) wdtc1 (ENSCGOG00000009093) Pike perch MODERN SPECIES 15 mal2 (ENSSLUG00000006226) si:ch211-93i7.4 (ENSSLUG00000006233) TNFRSF11B (ENSSLUG00000006243) ENSSLUG00000006253 ENSSLUG00000006266 CARMIL1 (ENSSLUG00000006360) scgn (ENSSLUG00000007175) CCN3 (ENSSLUG00000007191) ENSSLUG00000007196 ENSSLUG00000007203 sntb1 (ENSSLUG00000007205) ENSSLUG00000007216 ZFAT (ENSSLUG00000007280) #37 PTP4A3 (ENSSLUG00000007370) #14 ENSSLUG00000007405 ENSSLUG00000007804 ##22 CLPTM1L (ENSSLUG00000005157) MRS2 (ENSSLUG00000005198) ENSSLUG00000005217 CPQ (ENSSLUG00000005294) dscc1 (ENSSLUG00000005806) mrpl13 (ENSSLUG00000005825) COL14A1 (ENSSLUG00000005831) deptor (ENSSLUG00000005894) LIMD1 (ENSSLUG00000005930) lars2 (ENSSLUG00000006077) TMEM158 (ENSSLUG00000009029) CLEC3B (ENSSLUG00000009032) FEZ2 (ENSSLUG00000009039) ENSSLUG00000009046 ENSSLUG00000009051 Cottioidei ANCESTRAL SPECIES 7 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b ENSGT00390000003305 ENSGT00940000156658 #37 ENSGT00940000159581.b.a #14 ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ##22 ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 ENSGT00390000001515 ENSGT00940000153769.F.n ENSGT00520000055667 ENSGT00940000159019 ENSGT00390000015114 ENSGT00390000009719 ENSGT00390000010209.c.b ENSGT00950000183186.B.b.c ENSGT00390000017627.a.a.b Stickleback MODERN SPECIES 19 TMEM65 (ENSGACG00000006642) MTSS1 (ENSGACG00000006650) mal2 (ENSGACG00000006665) ENSGACG00000006682 si:ch211-93i7.4 (ENSGACG00000006686) TNFRSF11B (ENSGACG00000006690) ENSGACG00000006706 CARMIL1 (ENSGACG00000006707) scgn (ENSGACG00000006883) CCN3 (ENSGACG00000006901) sntb1 (ENSGACG00000006912) ENSGACG00000006944 ENSGACG00000006955 #37 PTP4A3 (ENSGACG00000006970) #14 ENSGACG00000006984 ENSGACG00000007004 ##22 ENSGACG00000007020 ENSGACG00000007035 ENSGACG00000007038 ENSGACG00000007040 ENSGACG00000007045 CPQ (ENSGACG00000007051) dscc1 (ENSGACG00000007056) mrpl13 (ENSGACG00000007061) COL14A1 (ENSGACG00000007065) ENSGACG00000007079 deptor (ENSGACG00000007081) LIMD1 (ENSGACG00000007087) lars2 (ENSGACG00000007099) cdcp1a (ENSGACG00000007130) CLEC3B (ENSGACG00000007136) Lumpfish MODERN SPECIES 7 deptor (ENSCLMG00005008372) COL14A1 (ENSCLMG00005008363) mrpl13 (ENSCLMG00005008358) dscc1 (ENSCLMG00005008357) CPQ (ENSCLMG00005007559) ENSCLMG00005007546 MRS2 (ENSCLMG00005007298) scgn (ENSCLMG00005007294) CCN3 (ENSCLMG00005007266) ENSCLMG00005007260 sntb1 (ENSCLMG00005007258) ENSCLMG00005007036 ENSCLMG00005006966 #37 ENSCLMG00005006960 #14 ENSCLMG00005006698 ENSCLMG00005006340 ##22 ENSCLMG00005006328 CLPTM1L (ENSCLMG00005006327) CARMIL1 (ENSCLMG00005006319) ENSCLMG00005006311 TNFRSF11B (ENSCLMG00005006309) si:ch211-93i7.4 (ENSCLMG00005006308) ENSCLMG00005006306 ENSCLMG00005006299 mal2 (ENSCLMG00005006297) MTSS1 (ENSCLMG00005006246) TMEM65 (ENSCLMG00005006240) mboat1 (ENSCLMG00005006235) ENSCLMG00005006230 ENSCLMG00005006229 CDKAL1 (ENSCLMG00005004820) Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 69 PTK2 (ENSLBEG00000023042) #22 ENSLBEG00000023013 ##22 ENSLBEG00000022997 CCN3 (ENSLBEG00000022979) scgn (ENSLBEG00000022946) CARMIL1 (ENSLBEG00000022854) ENSLBEG00000022820 TNFRSF11B (ENSLBEG00000022804) ENSLBEG00000022790 ENSLBEG00000022774 ENSLBEG00000022761 mal2 (ENSLBEG00000022749) MTSS1 (ENSLBEG00000022637) TMEM65 (ENSLBEG00000022553) mboat1 (ENSLBEG00000022521) ENSLBEG00000022497 CDKAL1 (ENSLBEG00000022455) Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 638 CPQ (ENSLBEG00000022715) ENSLBEG00000022760 MRS2 (ENSLBEG00000022782) ENSLBEG00000022811 ENSLBEG00000022837 sntb1 (ENSLBEG00000022859) ENSLBEG00000022920 ENSLBEG00000022976 ENSLBEG00000023070 #37 PTP4A3 (ENSLBEG00000023103) #14 ENSLBEG00000023138 ENSLBEG00000023185 ##22 ENSLBEG00000023205 ##22 Ballan wrasse MODERN SPECIES 638 CPQ (ENSLBEG00000022715) ENSLBEG00000022760 MRS2 (ENSLBEG00000022782) ENSLBEG00000022811 ENSLBEG00000022837 sntb1 (ENSLBEG00000022859) ENSLBEG00000022920 ENSLBEG00000022976 ENSLBEG00000023070 #37 PTP4A3 (ENSLBEG00000023103) #14 ENSLBEG00000023138 ENSLBEG00000023185 ##22 ENSLBEG00000023205 ##22 Cod MODERN SPECIES 19 GPATCH3 (ENSGMOG00000000991) nr0b2a (ENSGMOG00000000984) ENSGMOG00000024982 tpbgl (ENSGMOG00000026520) tmem222a (ENSGMOG00000000961) wdtc1 (ENSGMOG00000000939) ENSGMOG00000000903 ENSGMOG00000000889 ENSGMOG00000000872 CLEC3B (ENSGMOG00000000871) cdcp1a (ENSGMOG00000036986) lars2 (ENSGMOG00000000795) LIMD1 (ENSGMOG00000029782) ENSGMOG00000018220 ENSGMOG00000014462 ENSGMOG00000007215 ##22 ENSGMOG00000035024 ENSGMOG00000023957 ENSGMOG00000018290 ENSGMOG00000018314 ENSGMOG00000032215 ENSGMOG00000018415 ENSGMOG00000035277 ENSGMOG00000018435 ENSGMOG00000025371 ENSGMOG00000035907 ENSGMOG00000010934 ENSGMOG00000037039 ENSGMOG00000010921 znrf2b (ENSGMOG00000026654) ENSGMOG00000015129 Protacanthopterygii ANCESTRAL SPECIES 1 ENSGT00390000013846.a.b ENSGT00390000003781.e.a ENSGT00970000198403 ENSGT00940000157833.h.b ENSGT00940000156775.f ENSGT00390000008932.n ENSGT00390000008932.m ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.b.b ENSGT00940000156930 ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000155113.a.b ##22 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00390000016823.n ENSGT00390000012412 ENSGT00940000157222.a ENSGT00390000018110 ENSGT00940000164478.b ENSGT00940000160520 ENSGT00940000155471.d ENSGT00940000156541 ENSGT00940000170917 ENSGT00940000155697.A ENSGT00390000003571.h ENSGT00390000001827 ENSGT00390000012832 Northern pike MODERN SPECIES 19 ENSELUG00000006235 ENSELUG00000028102 AIF1 (ENSELUG00000006145) csnk2b (ENSELUG00000006027) ENSELUG00000005933 kcnk5b (ENSELUG00000005697) PON1 (ENSELUG00000005658) csnk2a1 (ENSELUG00000005623) SCX (ENSELUG00000026998) MROH1 (ENSELUG00000005557) scrt1b (ENSELUG00000005435) dgat1b (ENSELUG00000005370) GPR20 (ENSELUG00000005313) #15 SLC45A4 (ENSELUG00000005306) #16 DENND3 (ENSELUG00000005268) #20 ENSELUG00000005127 ##22 CLPTM1L (ENSELUG00000004923) MRS2 (ENSELUG00000004899) ENSELUG00000033023 ENSELUG00000004810 CMTM8 (ENSELUG00000004769) ctnnb1 (ENSELUG00000001202) ULK4 (ENSELUG00000004686) TRAK1 (ENSELUG00000004615) ccka (ENSELUG00000004525) cnot10 (ENSELUG00000004475) ENSELUG00000034558 TCAIM (ENSELUG00000004385) ABHD5 (ENSELUG00000004341) ano10a (ENSELUG00000004281) snrka (ENSELUG00000004229) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 2129 ENSGT00940000155113.a.b.k.a ##22 ENSGT00940000162064.m.a.a.a Salmoninae_a ANCESTRAL SPECIES 53 ENSGT00940000157833.h.b.f ENSGT00940000156775.f ENSGT00390000008932.n.f.a.a ENSGT00390000008932.n.f.a.b ENSGT00390000008932.m ENSGT00390000004215.a.b.b.c.b.d ENSGT01010000228832 ENSGT00940000161897.b.b.a ENSGT00940000156930.db.b ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000162064.m.a.a.a ENSGT00940000155113.a.b.k.a ##22 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.a.r.a ENSGT00390000018110 ENSGT00940000158117.f.a.a ENSGT00940000164478.b.f.a.a.a.b ENSGT00940000160520.b ENSGT00940000155471.d.d.a ENSGT00940000156541.q Salmo ANCESTRAL SPECIES 179 ENSGT00940000156775.f.e.a ENSGT00390000008932.m ENSGT00390000004215.a.b.b.c.b.d ENSGT01010000228832 ENSGT00940000161897.b.b.a ENSGT00940000156930.db.a ENSGT00940000156930.db.b ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000155113.a.b.k.a ##22 ENSGT00940000162064.m.a.a.a.b ENSGT00530000063461.A.a.a ENSGT00390000009988.g ENSGT00940000157222.a.r.a.c ENSGT00390000018110.c Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 11 ENSSSAG00000093452 ENSSSAG00000101408 ENSSSAG00000003968 ENSSSAG00000094458 ENSSSAG00000047465 ENSSSAG00000020316 CSK22 (ENSSSAG00000047298) ENSSSAG00000047273 ENSSSAG00000047030 ENSSSAG00000101892 scrt1b (ENSSSAG00000035178) dgat1b (ENSSSAG00000108554) ENSSSAG00000047264 #15 ENSSSAG00000004446 #16 ENSSSAG00000002859 #20 ENSSSAG00000002268 ##22 ENSSSAG00000010560 ENSSSAG00000003158 ENSSSAG00000010294 ENSSSAG00000042399 pgcp (ENSSSAG00000051533) ENSSSAG00000012776 ENSSSAG00000085308 ENSSSAG00000067958 ENSSSAG00000060715 ENSSSAG00000025705 ENSSSAG00000118589 ENSSSAG00000067961 ctnnb1 (ENSSSAG00000091484) ULK4 (ENSSSAG00000110192) TRAK1 (ENSSSAG00000095946) Atlantic salmon MODERN SPECIES 24 rxrbb (ENSSSAG00000113417) ENSSSAG00000007707 ENSSSAG00000007739 ENSSSAG00000106908 ENSSSAG00000106674 ENSSSAG00000040922 aif1 (ENSSSAG00000101797) ENSSSAG00000119983 scrt1b (ENSSSAG00000094898) dgat1b (ENSSSAG00000004491) ENSSSAG00000035453 #15 ENSSSAG00000040826 #16 ENSSSAG00000110117 #20 ENSSSAG00000010286 ENSSSAG00000114843 ENSSSAG00000104847 ##22 ENSSSAG00000002069 ENSSSAG00000051081 ENSSSAG00000084530 ENSSSAG00000097547 ENSSSAG00000087362 ENSSSAG00000089982 ENSSSAG00000063693 ENSSSAG00000111319 ENSSSAG00000009757 ENSSSAG00000117382 ENSSSAG00000007693 ENSSSAG00000114671 ctnnb1 (ENSSSAG00000108396) ULK4 (ENSSSAG00000097636) TRAK1 (ENSSSAG00000051980) River trout MODERN SPECIES 22 ENSSTUG00000009932 ENSSTUG00000009916 csnk2b (ENSSTUG00000009894) ENSSTUG00000009886 ENSSTUG00000009878 kcnk5b (ENSSTUG00000009873) pon1 (ENSSTUG00000009843) csnk2a1 (ENSSTUG00000009716) SCX (ENSSTUG00000009709) MROH1 (ENSSTUG00000008993) scrt1b (ENSSTUG00000008954) dgat1b (ENSSTUG00000008695) SLC45A4 (ENSSTUG00000008682) #16 DENND3 (ENSSTUG00000008235) #20 ENSSTUG00000008226 ENSSTUG00000005887 ##22 ENSSTUG00000005814 ENSSTUG00000005791 ENSSTUG00000005787 CPQ (ENSSTUG00000005776) ENSSTUG00000005764 ENSSTUG00000005760 CMTM8 (ENSSTUG00000005751) ENSSTUG00000005738 ENSSTUG00000005696 ENSSTUG00000005686 ctnnb1 (ENSSTUG00000005373) ENSSTUG00000005347 TRAK1 (ENSSTUG00000004868) ccka (ENSSTUG00000004830) cnot10 (ENSSTUG00000003813) Huchen MODERN SPECIES 4394 ENSHHUG00000041388 ENSHHUG00000041396 ##22 ENSHHUG00000042072 CLPTM1L (ENSHHUG00000042091) ENSHHUG00000042107 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 2 ENSGT00940000156775.f ENSGT00390000008932.n.f.a.a ENSGT00390000008932.n.f.a.b ENSGT00390000008932.m ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.b.b.a ENSGT00940000156930.db.a ENSGT00940000161897.b.b.b ENSGT00940000156930.db.b ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000155113.a.b.k.b.b ##22 ENSGT00940000155113.a.b.k.b.a ##22 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.a.r.a ENSGT00390000018110 ENSGT00940000158117.f.a ENSGT00940000164478.b.f.a.a.b ENSGT00940000164478.b.f.a.a.a.b ENSGT00940000160520.b ENSGT00940000155471.d.d.a ENSGT00940000156541 ENSGT00940000155697.A ENSGT00390000003571.h ENSGT00390000001827 ENSGT00940000159099.m ENSGT00390000012832 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155113.a.b.k.b.a ##22 Oncorhynchus ANCESTRAL SPECIES 50 ENSGT00390000008932.n.f.a.a ENSGT00390000008932.n.f.a.b ENSGT00390000008932.m ENSGT00390000004215.a.b.b.c.b.d.f ENSGT01010000228832 ENSGT00390000004215.a.b.b.c.b.d.e ENSGT00940000161897.b.b.a ENSGT00940000156930.db.b ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a.e ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000162064.m.a.a.a ENSGT00940000155113.a.b.k.b.b ##22 ENSGT00940000155113.a.b.k.b.a ##22 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.a.r.a ENSGT00390000018110.f ENSGT00940000158117.f.b ENSGT00940000164478.b.f.a.b ENSGT00940000160520.b.c.b ENSGT00940000155471.d.d.a ENSGT00940000156541.q ENSGT00940000155697.A ENSGT00390000003571.h ENSGT00390000001827.o.a ENSGT00940000159099.m ENSGT00390000012832 ENSGT00390000016277.a.k Rainbow trout MODERN SPECIES 11 ENSOMYG00000002803 ENSOMYG00000002890 ENSOMYG00000077840 ENSOMYG00000002954 ENSOMYG00000023984 ENSOMYG00000065100 ENSOMYG00000060678 ENSOMYG00000021221 ENSOMYG00000064074 ENSOMYG00000024124 scrt1b (ENSOMYG00000024235) dgat1b (ENSOMYG00000064075) ENSOMYG00000024302 #15 ENSOMYG00000067159 #16 ENSOMYG00000075247 #20 ENSOMYG00000059920 ##22 ENSOMYG00000071744 ENSOMYG00000027032 ENSOMYG00000045229 ENSOMYG00000045236 ENSOMYG00000061490 ENSOMYG00000061241 ENSOMYG00000045238 ENSOMYG00000073451 ENSOMYG00000053102 ENSOMYG00000059001 ENSOMYG00000026140 ENSOMYG00000058229 ctnnb1 (ENSOMYG00000003085) ULK4 (ENSOMYG00000057309) ENSOMYG00000067864 Oncorhynchus_a ANCESTRAL SPECIES 175 ENSGT00940000155113.a.b.k.b.a ##22 ENSGT00530000063461.A.a.c ENSGT00390000009988 ENSGT00940000157222.a.r.a ENSGT00390000018110.f ENSGT00940000158117.f.b ENSGT01010000228722 ENSGT00940000156541.r ENSGT00940000155697.A ENSGT00390000003571.h ENSGT00390000001827.o.a ENSGT00940000159099.m ENSGT00390000012832 ENSGT00390000016277.a.k ENSGT00940000157537 ENSGT00940000155365.a.a.k.a Coho salmon MODERN SPECIES 190 ENSOKIG00005043834 ENSOKIG00005041647 ##22 CLPTM1L (ENSOKIG00005040927) Salmoninae ANCESTRAL SPECIES 2 ENSGT00940000157833.h.b.f ENSGT00940000156775.f ENSGT00390000008932.n.f.a.a ENSGT00390000008932.n.f.a.b ENSGT00390000008932.m ENSGT00390000004215.a.b.b.c.b.d ENSGT00940000161897.b.b.a ENSGT00940000156930.db.a ENSGT00940000161897.b.b.b ENSGT00940000156930.db.b ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000155113.a.b.k.b.b ##22 ENSGT00940000155113.a.b.k.b.a ##22 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.a.r.a ENSGT00390000018110 ENSGT00940000158117.f.a ENSGT00940000164478.b.f.a.a.b ENSGT00940000164478.b.f.a.a.a.b ENSGT00940000160520.b ENSGT00940000155471.d.d.a ENSGT00940000156541 ENSGT00940000155697.A ENSGT00390000003571.h ENSGT00390000001827 ENSGT00940000159099.m Huchen MODERN SPECIES 6838 ENSHHUG00000006029 ##22 ENSHHUG00000006027 #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155113.a.b.k.b.b ##22 Oncorhynchus ANCESTRAL SPECIES 50 ENSGT00940000156775.f ENSGT00390000008932.n.f.a.a ENSGT00390000008932.n.f.a.b ENSGT00390000008932.m ENSGT00390000004215.a.b.b.c.b.d.f ENSGT01010000228832 ENSGT00390000004215.a.b.b.c.b.d.e ENSGT00940000161897.b.b.a ENSGT00940000156930.db.b ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a.e ENSGT01040000240444.B.b #15 ENSGT00950000182914.a.a.a.c.a.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000162064.m.a.a.a ENSGT00940000155113.a.b.k.b.b ##22 ENSGT00940000155113.a.b.k.b.a ##22 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.a.r.a ENSGT00390000018110.f ENSGT00940000158117.f.b ENSGT00940000164478.b.f.a.b ENSGT00940000160520.b.c.b ENSGT00940000155471.d.d.a ENSGT00940000156541.q ENSGT00940000155697.A ENSGT00390000003571.h ENSGT00390000001827.o.a ENSGT00940000159099.m ENSGT00390000012832 Oncorhynchus_a ANCESTRAL SPECIES 137 ENSGT00940000159208.B.f.a.b ENSGT00390000013846.a.b.h.a.b ENSGT00390000003781.e.a ENSGT00940000157833.h.b.e ENSGT00940000156775.f ENSGT00390000008932.n.f.a.b ENSGT00390000008932.m ENSGT00390000004215.a.b.b.c.b.d.e ENSGT00940000161897.b.b.b ENSGT00940000156930.db.b ENSGT00940000154491.c.a.a ENSGT00950000183081.b.i.a.e ENSGT00950000182914.a.a.a.c.a.a #16 ENSGT00940000155784.C.u.a #20 ENSGT00940000162064.m.a.a.a ENSGT00940000155113.a.b.k.b.b ##22 ENSGT00530000063461.A.a.d Chinook salmon MODERN SPECIES 1477 ENSOTSG00005031189 ##22 Coho salmon MODERN SPECIES 31 AIF1 (ENSOKIG00005045634) ENSOKIG00005045596 ENSOKIG00005045505 kcnk5b (ENSOKIG00005045494) pon1 (ENSOKIG00005045485) ENSOKIG00005045467 csnk2a1 (ENSOKIG00005044446) ENSOKIG00005044368 SCX (ENSOKIG00005044364) MROH1 (ENSOKIG00005041890) scrt1b (ENSOKIG00005041751) dgat1b (ENSOKIG00005041713) SLC45A4 (ENSOKIG00005041688) #16 DENND3 (ENSOKIG00005041065) #20 ENSOKIG00005041016 ENSOKIG00005039850 ##22 CLPTM1L (ENSOKIG00005039459) MRS2 (ENSOKIG00005039328) ENSOKIG00005039313 CPQ (ENSOKIG00005039282) ANGPT1 (ENSOKIG00005039244) ENSOKIG00005039214 ENSOKIG00005039181 ENSOKIG00005039159 ENSOKIG00005039029 CMTM8 (ENSOKIG00005035520) ctnnb1 (ENSOKIG00005035058) ULK4 (ENSOKIG00005034694) TRAK1 (ENSOKIG00005034525) ccka (ENSOKIG00005034510) cnot10 (ENSOKIG00005034439) Rainbow trout MODERN SPECIES 21 ENSOMYG00000011191 ENSOMYG00000057976 ENSOMYG00000011250 ENSOMYG00000011353 ENSOMYG00000011396 ENSOMYG00000023306 ENSOMYG00000011521 ENSOMYG00000023370 ENSOMYG00000023616 scrt1b (ENSOMYG00000024251) dgat1b (ENSOMYG00000024210) ENSOMYG00000024277 #15 ENSOMYG00000024283 #16 ENSOMYG00000054091 ENSOMYG00000025947 #20 ENSOMYG00000027000 ##22 ENSOMYG00000026982 ENSOMYG00000051059 ENSOMYG00000027106 ENSOMYG00000027135 ENSOMYG00000027158 ENSOMYG00000018240 ENSOMYG00000018268 ENSOMYG00000018358 ENSOMYG00000018506 ENSOMYG00000011318 ctnnb1 (ENSOMYG00000018527) ULK4 (ENSOMYG00000060968) ENSOMYG00000074640 ENSOMYG00000071096 TRAK1 (ENSOMYG00000050972) Salmo ANCESTRAL SPECIES ENSGT00940000155113.a.b.k.b.b ##22 River trout MODERN SPECIES 30 ENSSTUG00000047020 ENSSTUG00000047047 csnk2b (ENSSTUG00000047069) ENSSTUG00000047110 kcnk5b (ENSSTUG00000047121) ENSSTUG00000047131 csnk2a1 (ENSSTUG00000047177) SCX (ENSSTUG00000047277) MROH1 (ENSSTUG00000047326) ENSSTUG00000048155 scrt1b (ENSSTUG00000048161) dgat1b (ENSSTUG00000048171) GPR20 (ENSSTUG00000048184) #15 SLC45A4 (ENSSTUG00000048186) #16 DENND3 (ENSSTUG00000048206) #20 ENSSTUG00000048540 ##22 ENSSTUG00000048703 ENSSTUG00000048708 MRS2 (ENSSTUG00000048753) ENSSTUG00000048766 CPQ (ENSSTUG00000048770) ANGPT1 (ENSSTUG00000048771) ENSSTUG00000048783 ENSSTUG00000048801 ENSSTUG00000048802 ENSSTUG00000048804 ctnnb1 (ENSSTUG00000015427) ENSSTUG00000016704 ENSSTUG00000016722 TRAK1 (ENSSTUG00000016741) ccka (ENSSTUG00000016875) Salmoninae ANCESTRAL SPECIES ENSGT00940000155113.a.b.l ##22 Huchen DUPLICATION Huchen MODERN SPECIES 380 ENSHHUG00000038225 ENSHHUG00000038231 ##22 rplp1 (ENSHHUG00000038234) ENSHHUG00000038239 clptm1l (ENSHHUG00000038252) CSMD3 (ENSHHUG00000038273) Huchen MODERN SPECIES 7788 ENSHHUG00000019698 ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Amniota ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Sauria ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Archelosauria ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Archosauria ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Aves ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Neognathae ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Galloanserae ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Phasianidae ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Phasianidae_b ANCESTRAL SPECIES ENSGT00940000155113.a.b ##22 Turkey MODERN SPECIES 22 ENSMGAG00000022370 ENSMGAG00000012876 ENSMGAG00000018719 #37 ENSMGAG00000012883 #37 ENSMGAG00000022843 #36 ENSMGAG00000012888 #36 ENSMGAG00000012896 #28 ENSMGAG00000020709 ENSMGAG00000012923 #26 ENSMGAG00000018714 #26 ENSMGAG00000012927 #25 ENSMGAG00000012936 #24 ENSMGAG00000012952 #22 ENSMGAG00000012951 ENSMGAG00000020023 #22 ENSMGAG00000022269 ##22 ENSMGAG00000012942 #23 ENSMGAG00000019028 #20 ENSMGAG00000012966 #20 ENSMGAG00000012969 #16 ENSMGAG00000015881 #15 ENSMGAG00000012972 #14 ENSMGAG00000018853 ENSMGAG00000012979 ENSMGAG00000012984 #10 ENSMGAG00000021273 ENSMGAG00000012987 #8 ENSMGAG00000020757 ##8 ENSMGAG00000012990 ##8 ENSMGAG00000012991 ENSMGAG00000012993 ##8