Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000154418 #22
Gnathostomata	DUPLICATION
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES	1280																ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21
Euteleostomi	ANCESTRAL SPECIES	141	ENSGT00390000005639.a.b	ENSGT00530000063586.a	ENSGT00390000001546	ENSGT00390000002554	ENSGT00940000157798	ENSGT00940000159518	ENSGT00390000005029	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28
Sarcopterygii	ANCESTRAL SPECIES	124	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.a.b ##14	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28
Tetrapoda	ANCESTRAL SPECIES	39	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Amniota	ANCESTRAL SPECIES	10	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Mammalia	ANCESTRAL SPECIES	14	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Theria	ANCESTRAL SPECIES	26	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Eutheria	ANCESTRAL SPECIES	13	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT00390000014952	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT00390000014952	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00390000018550 #36
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT00390000014952	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00390000018550 #36
Primates	ANCESTRAL SPECIES	16	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00910000146943	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Platyrrhini	DUPLICATION
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a.h.a #22	ENSGT00910000146943.c	ENSGT00910000146943.d	ENSGT00940000154418.a.a.h.b ##22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34
Cebidae	ANCESTRAL SPECIES	17	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a.h.a #22	ENSGT00910000146943.d	ENSGT00940000154418.a.a.h.b ##22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36
Marmoset	MODERN SPECIES	3	CUEDC2 (ENSCJAG00000065966) #7	MFSD13A (ENSCJAG00000018006) #8	C10orf95 (ENSCJAG00000048294) #9	ACTR1A (ENSCJAG00000018011) #10	SUFU (ENSCJAG00000018029) #11	ENSCJAG00000078286 #12	TRIM8 (ENSCJAG00000018057) #13	ARL3 (ENSCJAG00000040244) #14	SFXN2 (ENSCJAG00000018068) #15	WBP1L (ENSCJAG00000046138) #16	CYP17A1 (ENSCJAG00000018089) #17	BORCS7 (ENSCJAG00000039007) #18	CNNM2 (ENSCJAG00000018118) #19	NT5C2 (ENSCJAG00000018148) #20	PCGF6 (ENSCJAG00000018192) #21	INA (ENSCJAG00000018178) #22	TAF5 (ENSCJAG00000018213) #23	ENSCJAG00000018253 #24	PDCD11 (ENSCJAG00000018257) #25	CALHM2 (ENSCJAG00000018290) #26	CALHM1 (ENSCJAG00000018294) #27	CALHM3 (ENSCJAG00000018295) #28	NEURL1 (ENSCJAG00000047912) #29	SH3PXD2A (ENSCJAG00000018307) #30	STN1 (ENSCJAG00000040388) #31	ENSCJAG00000076134 #32	SLK (ENSCJAG00000018363) #33	COL17A1 (ENSCJAG00000018404) #34	ENSCJAG00000079409 #35	SFR1 (ENSCJAG00000018436) #36	CFAP43 (ENSCJAG00000018443) #37
Mas night monkey	MODERN SPECIES	906	ITGAX (ENSANAG00000016257)	COX6A2 (ENSANAG00000021157)	ARMC5 (ENSANAG00000035888)	TGFB1I1 (ENSANAG00000024534)	SLC5A2 (ENSANAG00000034352)	RUSF1 (ENSANAG00000027786)	AHSP (ENSANAG00000010533)	ENSANAG00000037397	ENSANAG00000020429	ENSANAG00000022403	ENSANAG00000024644	ENSANAG00000038261	KRBOX5 (ENSANAG00000027751)	ENSANAG00000024839	ENSANAG00000038269	ENSANAG00000016721 #22	ENSANAG00000038393	ENSANAG00000035834	ENSANAG00000036084	ENSANAG00000035233
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a.h.a #22	ENSGT00910000146943.c	ENSGT00910000146943.d	ENSGT00940000154418.a.a.h.b ##22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351.bb
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	658	CUEDC2 (ENSANAG00000038457) #7	C10orf95 (ENSANAG00000032530) #9	MFSD13A (ENSANAG00000032765) #8	ACTR1A (ENSANAG00000033970) #10	SUFU (ENSANAG00000036277) #11	TRIM8 (ENSANAG00000021560) #13	ENSANAG00000026371	ARL3 (ENSANAG00000027007) #14	SFXN2 (ENSANAG00000031917) #15	WBP1L (ENSANAG00000034043) #16	CYP17A1 (ENSANAG00000022241) #17	ENSANAG00000037880 #18	AS3MT (ENSANAG00000038067)	CNNM2 (ENSANAG00000020034) #19	NT5C2 (ENSANAG00000024718) #20	ENSANAG00000027873 ##22	ENSANAG00000027437	PCGF6 (ENSANAG00000028199) #21	TAF5 (ENSANAG00000033631) #23	ATP5MK (ENSANAG00000033958) #24	PDCD11 (ENSANAG00000034576) #25	CALHM2 (ENSANAG00000027035) #26	CALHM1 (ENSANAG00000032120) #27	CALHM3 (ENSANAG00000032187) #28	NEURL1 (ENSANAG00000037067) #29	SH3PXD2A (ENSANAG00000037670) #30	STN1 (ENSANAG00000038147) #31	ENSANAG00000038444	SLK (ENSANAG00000020590) #33	ENSANAG00000026163	COL17A1 (ENSANAG00000027237) #34
Mas night monkey	MODERN SPECIES	1159			KLF12 (ENSANAG00000025382)	KLF5 (ENSANAG00000030364)	PIBF1 (ENSANAG00000029117)	ENSANAG00000025869	DIS3 (ENSANAG00000025580)	BORA (ENSANAG00000027367)	MZT1 (ENSANAG00000030879)	ENSANAG00000022797	DACH1 (ENSANAG00000033149)	KLHL1 (ENSANAG00000018250)	ENSANAG00000023421	ENSANAG00000020611	PCDH9 (ENSANAG00000021911)	ENSANAG00000003356 ##22	ENSANAG00000033230	ENSANAG00000028239	PCDH20 (ENSANAG00000031386)	ENSANAG00000030827	ENSANAG00000030020
Cebidae	ANCESTRAL SPECIES	17	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a.h.a #22	ENSGT00910000146943.d	ENSGT00940000154418.a.a.h.b ##22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351.bb
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00910000146943.d	ENSGT00940000154418.a.a.h.b ##22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351.bb
Capuchin	MODERN SPECIES	71	ENSCCAG00000030377	ACTR1A (ENSCCAG00000022008) #10	ENSCCAG00000035649	SUFU (ENSCCAG00000024592) #11	TRIM8 (ENSCCAG00000033738) #13	ARL3 (ENSCCAG00000028563) #14	SFXN2 (ENSCCAG00000034586) #15	WBP1L (ENSCCAG00000001078) #16	CYP17A1 (ENSCCAG00000022170) #17	ENSCCAG00000035022	BORCS7 (ENSCCAG00000033857) #18	AS3MT (ENSCCAG00000020106)	CNNM2 (ENSCCAG00000023803) #19	NT5C2 (ENSCCAG00000026539) #20	ENSCCAG00000032845	INA (ENSCCAG00000022073) ##22	ENSCCAG00000026135	PCGF6 (ENSCCAG00000037838) #21	TAF5 (ENSCCAG00000025917) #23	ENSCCAG00000019694 #24	PDCD11 (ENSCCAG00000018950) #25	CALHM2 (ENSCCAG00000023950) #26	CALHM1 (ENSCCAG00000011595) #27	CALHM3 (ENSCCAG00000034201) #28	NEURL1 (ENSCCAG00000029247) #29	SH3PXD2A (ENSCCAG00000028177) #30	STN1 (ENSCCAG00000020507) #31	SLK (ENSCCAG00000000586) #33
Bolivian squirrel monkey	MODERN SPECIES	47	FBXL15 (ENSSBOG00000024265)	CUEDC2 (ENSSBOG00000033427) #7	MFSD13A (ENSSBOG00000022135) #8	ACTR1A (ENSSBOG00000019736) #10	SUFU (ENSSBOG00000027977) #11	TRIM8 (ENSSBOG00000024105) #13	ARL3 (ENSSBOG00000030806) #14	SFXN2 (ENSSBOG00000026232) #15	WBP1L (ENSSBOG00000009511) #16	CYP17A1 (ENSSBOG00000020558) #17	BORCS7 (ENSSBOG00000031523) #18	AS3MT (ENSSBOG00000033111)	ENSSBOG00000031782	CNNM2 (ENSSBOG00000030131) #19	NT5C2 (ENSSBOG00000020827) #20	INA (ENSSBOG00000020360) ##22	PCGF6 (ENSSBOG00000021501) #21	TAF5 (ENSSBOG00000020350) #23	ATP5MK (ENSSBOG00000030019) #24	PDCD11 (ENSSBOG00000030308) #25	CALHM2 (ENSSBOG00000030532) #26	CALHM1 (ENSSBOG00000027301) #27	CALHM3 (ENSSBOG00000024427) #28	NEURL1 (ENSSBOG00000028649) #29	SH3PXD2A (ENSSBOG00000028219) #30	STN1 (ENSSBOG00000031516) #31	SLK (ENSSBOG00000027292) #33	COL17A1 (ENSSBOG00000032158) #34	CFAP43 (ENSSBOG00000027311) #37	GSTO1 (ENSSBOG00000020871)	GSTO2 (ENSSBOG00000034665)
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	12	ENSGT00950000183022.a.b	ENSGT00940000158556	ENSGT00940000161063	ENSGT00940000162076	ENSGT00940000160168	ENSGT00390000000464	ENSGT00390000004791	ENSGT00930000151043	ENSGT00390000003574	ENSGT00390000008371.a	ENSGT00390000014886	ENSGT00940000159466	ENSGT00940000162280	ENSGT00940000161339	ENSGT00940000162771	ENSGT00940000154418.a.a.g.a ##22	ENSGT00940000161099	ENSGT00940000160945	ENSGT00940000160256.b	ENSGT00940000156221.e.b	ENSGT00950000183161.b	ENSGT01050000245064	ENSGT00940000158561	ENSGT00940000155005	ENSGT00510000047399	ENSGT00940000158056	ENSGT00390000005496	ENSGT00390000015231	ENSGT00390000013502.b	ENSGT01060000248544.a.a.b.a.b	ENSGT00390000002560
Cebidae	ANCESTRAL SPECIES	12	ENSGT00950000183022.a.b	ENSGT00940000158556	ENSGT00940000161063	ENSGT00940000162076	ENSGT00940000160168	ENSGT00390000000464	ENSGT00390000004791	ENSGT00930000151043	ENSGT00390000003574	ENSGT00390000008371.a	ENSGT00390000014886	ENSGT00940000159466	ENSGT00940000162280	ENSGT00940000161339	ENSGT00940000162771	ENSGT00940000154418.a.a.g.a ##22	ENSGT00940000161099	ENSGT00940000160945	ENSGT00940000160256.b	ENSGT00940000156221.e.b	ENSGT00950000183161.b	ENSGT01050000245064	ENSGT00940000158561	ENSGT00940000155005	ENSGT00510000047399	ENSGT00940000158056	ENSGT00390000005496	ENSGT00390000015231	ENSGT00390000013502.b	ENSGT01060000248544.a.a.b.a.b	ENSGT00390000002560
Cebidae_a	ANCESTRAL SPECIES	6	ENSGT00390000018244	ENSGT00950000183022.a.b	ENSGT00940000158556	ENSGT00940000161063	ENSGT00940000162076	ENSGT00940000160168	ENSGT00390000004791	ENSGT00930000151043	ENSGT00390000003574	ENSGT00390000008371.a	ENSGT00390000014886	ENSGT00940000159466	ENSGT00940000162280	ENSGT00940000161339	ENSGT00940000162771	ENSGT00940000154418.a.a.g.a ##22	ENSGT00940000161099	ENSGT00940000160945	ENSGT00940000160256.b	ENSGT00940000156221.e.b	ENSGT00950000183161.b	ENSGT01050000245064	ENSGT00940000158561	ENSGT00940000153664.A.a.n.l.b	ENSGT00940000155005	ENSGT00510000047399	ENSGT00940000158056	ENSGT00390000005496	ENSGT00390000015231	ENSGT00390000013502.b	ENSGT01060000248544.a.a.b.a.b
Capuchin	DUPLICATION
Capuchin	MODERN SPECIES	783												ENSCCAG00000024210	ENSCCAG00000023705	ENSCCAG00000031292	ZNF267 (ENSCCAG00000029096)	ENSCCAG00000032097 ##22	ENSCCAG00000023655	ENSCCAG00000030073	ENSCCAG00000033550	ENSCCAG00000023910	ENSCCAG00000035133
Capuchin	MODERN SPECIES	84	SLC19A2 (ENSCCAG00000037913)	F5 (ENSCCAG00000020831)	SELP (ENSCCAG00000035312)	SELL (ENSCCAG00000028534)	SELE (ENSCCAG00000032933)	C1orf112 (ENSCCAG00000025894)	SCYL3 (ENSCCAG00000028147)	KIFAP3 (ENSCCAG00000010781)	NTMT2 (ENSCCAG00000036256)	GORAB (ENSCCAG00000034220)	ENSCCAG00000030279	PRRX1 (ENSCCAG00000019169)	MROH9 (ENSCCAG00000037701)	FMO3 (ENSCCAG00000026265)	ENSCCAG00000033729	ENSCCAG00000023480 ##22	FMO2 (ENSCCAG00000033286)	FMO1 (ENSCCAG00000020817)
Mas night monkey	MODERN SPECIES	1256	SLC19A2 (ENSANAG00000030143)	F5 (ENSANAG00000029646)	SELP (ENSANAG00000035384)	ENSANAG00000034982	SELL (ENSANAG00000037545)	SELE (ENSANAG00000032760)	C1orf112 (ENSANAG00000021314)	SCYL3 (ENSANAG00000024270)	KIFAP3 (ENSANAG00000013349)	NTMT2 (ENSANAG00000032796)	GORAB (ENSANAG00000027377)	PRRX1 (ENSANAG00000023837)	MROH9 (ENSANAG00000022237)	FMO3 (ENSANAG00000038350)	ENSANAG00000037549	ENSANAG00000007884 ##22	FMO2 (ENSANAG00000037111)	FMO1 (ENSANAG00000029043)	FMO4 (ENSANAG00000028774)	ENSANAG00000037798	ENSANAG00000033737	PRRC2C (ENSANAG00000027242)	MYOCOS (ENSANAG00000024934)	MYOC (ENSANAG00000023819)	VAMP4 (ENSANAG00000030697)	METTL13 (ENSANAG00000022221)	ENSANAG00000007246	DNM3 (ENSANAG00000037644)	PIGC (ENSANAG00000014760)	C1orf105 (ENSANAG00000034709)	SUCO (ENSANAG00000028006)
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000154418.a.a.g.b ##22
Mas night monkey	MODERN SPECIES	860					POU4F1 (ENSANAG00000025165)	OBI1 (ENSANAG00000028343)	ENSANAG00000031946	ENSANAG00000036982	RBM26 (ENSANAG00000033451)	ENSANAG00000025982	ENSANAG00000036128	SPRY2 (ENSANAG00000031408)	ENSANAG00000022993	ENSANAG00000031451	SLITRK1 (ENSANAG00000005794)	ENSANAG00000029901 ##22	SLITRK6 (ENSANAG00000031387)	SLITRK5 (ENSANAG00000031105)
Cebidae	ANCESTRAL SPECIES	119																ENSGT00940000154418.a.a.g.b ##22	ENSGT00910000146943.c
Cebidae_a	ANCESTRAL SPECIES	204																ENSGT00940000154418.a.a.g.b ##22	ENSGT00910000146943.c
Bolivian squirrel monkey	MODERN SPECIES	78	PRSS36 (ENSSBOG00000032339)	FUS (ENSSBOG00000034540)	PYCARD (ENSSBOG00000028856)	TRIM72 (ENSSBOG00000022962)	ITGAM (ENSSBOG00000003560)	ITGAX (ENSSBOG00000019717)	ITGAD (ENSSBOG00000022769)	COX6A2 (ENSSBOG00000028537)	ARMC5 (ENSSBOG00000031129)	TGFB1I1 (ENSSBOG00000021971)	SLC5A2 (ENSSBOG00000033297)	RUSF1 (ENSSBOG00000028027)	AHSP (ENSSBOG00000027785)	ENSSBOG00000019720	ZNF267 (ENSSBOG00000022153)	ENSSBOG00000021063 ##22	ENSSBOG00000018962	ENSSBOG00000022325	ZNF248 (ENSSBOG00000032161)	ZNF25 (ENSSBOG00000026218)	ENSSBOG00000033184	ZNF37A (ENSSBOG00000031854)	BMS1 (ENSSBOG00000035778)	RET (ENSSBOG00000019160)	CSGALNACT2 (ENSSBOG00000028834)	RASGEF1A (ENSSBOG00000020233)	FXYD4 (ENSSBOG00000033394)	HNRNPF (ENSSBOG00000018361)	ENSSBOG00000017615	ZNF485 (ENSSBOG00000036222)	ZNF32 (ENSSBOG00000031175)
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00910000146943	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00390000018550 #36
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782.s #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00910000146943	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36
Hominidae	ANCESTRAL SPECIES	13	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782.s #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00390000001447.p.a	ENSGT00940000154418.a.a #22	ENSGT00910000146943	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782.s #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00390000001447.p.a	ENSGT00940000154418.a.a #22	ENSGT00940000158034.l #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Gorilla	MODERN SPECIES	1	MFSD13A (ENSGGOG00000011231) #8	ACTR1A (ENSGGOG00000011237) #10	SUFU (ENSGGOG00000011242) #11	TRIM8 (ENSGGOG00000003887) #13	ARL3 (ENSGGOG00000003895) #14	ENSGGOG00000037278	SFXN2 (ENSGGOG00000009385) #15	WBP1L (ENSGGOG00000006632) #16	CYP17A1 (ENSGGOG00000012438) #17	BORCS7 (ENSGGOG00000027277) #18	ENSGGOG00000016551	CNNM2 (ENSGGOG00000013254) #19	NT5C2 (ENSGGOG00000013257) #20	ENSGGOG00000037824	ENSGGOG00000023942	INA (ENSGGOG00000002914) #22	ENSGGOG00000014657 #21	ENSGGOG00000005443 #23	ENSGGOG00000011616 #24	ENSGGOG00000037876 #24	PDCD11 (ENSGGOG00000011621) #25	CALHM2 (ENSGGOG00000011652) #26	CALHM1 (ENSGGOG00000011656) #27	CALHM3 (ENSGGOG00000011662) #28	NEURL1 (ENSGGOG00000011670) #29	SH3PXD2A (ENSGGOG00000037810) #30	STN1 (ENSGGOG00000008979) #31	SLK (ENSGGOG00000026079) #33	COL17A1 (ENSGGOG00000000510) #34	SFR1 (ENSGGOG00000025713) #36	CFAP43 (ENSGGOG00000000899) #37
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782.s #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00390000001447.p.a	ENSGT00940000154418.a.a #22	ENSGT00940000158034.l #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Human	MODERN SPECIES	1	CUEDC2 (ENSG00000107874) #7	C10orf95 (ENSG00000120055) #9	MFSD13A (ENSG00000138111) #8	ACTR1A (ENSG00000138107) #10	SUFU (ENSG00000107882) #11	TRIM8 (ENSG00000171206) #13	ARL3 (ENSG00000138175) #14	SFXN2 (ENSG00000156398) #15	WBP1L (ENSG00000166272) #16	CYP17A1 (ENSG00000148795) #17	BORCS7 (ENSG00000166275) #18	AS3MT (ENSG00000214435)	CNNM2 (ENSG00000148842) #19	NT5C2 (ENSG00000076685) #20	RPEL1 (ENSG00000235376)	INA (ENSG00000148798) #22	PCGF6 (ENSG00000156374) #21	TAF5 (ENSG00000148835) #23	ATP5MK (ENSG00000173915) #24	PDCD11 (ENSG00000148843) #25	CALHM2 (ENSG00000138172) #26	CALHM1 (ENSG00000185933) #27	CALHM3 (ENSG00000183128) #28	NEURL1 (ENSG00000107954) #29	SH3PXD2A (ENSG00000107957) #30	STN1 (ENSG00000107960) #31	SLK (ENSG00000065613) #33	COL17A1 (ENSG00000065618) #34	SFR1 (ENSG00000156384) #36	CFAP43 (ENSG00000197748) #37	GSTO1 (ENSG00000148834)
Pan	ANCESTRAL SPECIES	16	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782.s #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00390000001447.p.a	ENSGT00940000154418.a.a #22	ENSGT00940000158034.l #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Bonobo	MODERN SPECIES	1	FBXL15 (ENSPPAG00000041099)	CUEDC2 (ENSPPAG00000013700) #7	MFSD13A (ENSPPAG00000000308) #8	ACTR1A (ENSPPAG00000030539) #10	SUFU (ENSPPAG00000028891) #11	TRIM8 (ENSPPAG00000030577) #13	ARL3 (ENSPPAG00000034961) #14	SFXN2 (ENSPPAG00000032477) #15	WBP1L (ENSPPAG00000025524) #16	CYP17A1 (ENSPPAG00000033616) #17	ENSPPAG00000038677 #18	AS3MT (ENSPPAG00000040457)	CNNM2 (ENSPPAG00000031457) #19	NT5C2 (ENSPPAG00000044029) #20	ENSPPAG00000032885	INA (ENSPPAG00000038377) #22	ENSPPAG00000041879 #21	TAF5 (ENSPPAG00000038777) #23	ATP5MK (ENSPPAG00000031402) #24	PDCD11 (ENSPPAG00000024593) #25	CALHM2 (ENSPPAG00000031003) #26	CALHM1 (ENSPPAG00000037598) #27	CALHM3 (ENSPPAG00000008882) #28	ENSPPAG00000035559 #29	ENSPPAG00000007628	SH3PXD2A (ENSPPAG00000040068) #30	STN1 (ENSPPAG00000030947) #31	SLK (ENSPPAG00000043689) #33	ENSPPAG00000031577 #34	SFR1 (ENSPPAG00000037316) #36	CFAP43 (ENSPPAG00000040294) #37
Chimpanzee	MODERN SPECIES	1	CUEDC2 (ENSPTRG00000002891) #7	C10H10orf95 (ENSPTRG00000045273) #9	MFSD13A (ENSPTRG00000002893) #8	ACTR1A (ENSPTRG00000002894) #10	SUFU (ENSPTRG00000002895) #11	TRIM8 (ENSPTRG00000002896) #13	ARL3 (ENSPTRG00000045593) #14	SFXN2 (ENSPTRG00000002898) #15	WBP1L (ENSPTRG00000049387) #16	CYP17A1 (ENSPTRG00000002900) #17	ENSPTRG00000002902 #18	AS3MT (ENSPTRG00000033989)	CNNM2 (ENSPTRG00000002904) #19	NT5C2 (ENSPTRG00000002905) #20	ENSPTRG00000043239	INA (ENSPTRG00000002907) #22	PCGF6 (ENSPTRG00000002908) #21	TAF5 (ENSPTRG00000002909) #23	ATP5MK (ENSPTRG00000002910) #24	PDCD11 (ENSPTRG00000002911) #25	CALHM2 (ENSPTRG00000002913) #26	CALHM1 (ENSPTRG00000002914) #27	CALHM3 (ENSPTRG00000002915) #28	NEURL1 (ENSPTRG00000049609) #29	ENSPTRG00000046888	SH3PXD2A (ENSPTRG00000047766) #30	STN1 (ENSPTRG00000002919) #31	SLK (ENSPTRG00000002920) #33	COL17A1 (ENSPTRG00000002921) #34	SFR1 (ENSPTRG00000002922) #36	CFAP43 (ENSPTRG00000002924) #37
Orangutan	MODERN SPECIES	1	ACTR1A (ENSPPYG00000002605) #10	SUFU (ENSPPYG00000002606) #11	ENSPPYG00000033083	TRIM8 (ENSPPYG00000002607) #13	ARL3 (ENSPPYG00000031083) #14	SFXN2 (ENSPPYG00000002609) #15	WBP1L (ENSPPYG00000002610) #16	ENSPPYG00000041191	CYP17A1 (ENSPPYG00000002611) #17	BORCS7 (ENSPPYG00000002613) #18	AS3MT (ENSPPYG00000002614)	CNNM2 (ENSPPYG00000002615) #19	NT5C2 (ENSPPYG00000002616) #20	ENSPPYG00000007794	ENSPPYG00000031986	INA (ENSPPYG00000002617) #22	ENSPPYG00000040925	PCGF6 (ENSPPYG00000002618) #21	TAF5 (ENSPPYG00000002619) #23	ENSPPYG00000002620 #24	PDCD11 (ENSPPYG00000002621) #25	CALHM2 (ENSPPYG00000002623) #26	CALHM1 (ENSPPYG00000002624) #27	ENSPPYG00000002625 #28	NEURL1 (ENSPPYG00000002626) #29	SH3PXD2A (ENSPPYG00000002627) #30	STN1 (ENSPPYG00000002628) #31	SLK (ENSPPYG00000002629) #33	COL17A1 (ENSPPYG00000002630) #34	SFR1 (ENSPPYG00000002631) #36	CFAP43 (ENSPPYG00000002632) #37
Gibbon	MODERN SPECIES	18	FBXL15 (ENSNLEG00000015140)	CUEDC2 (ENSNLEG00000027134) #7	MFSD13A (ENSNLEG00000015151) #8	ACTR1A (ENSNLEG00000015157) #10	SUFU (ENSNLEG00000015166) #11	TRIM8 (ENSNLEG00000015181) #13	ARL3 (ENSNLEG00000015183) #14	SFXN2 (ENSNLEG00000033903) #15	WBP1L (ENSNLEG00000033256) #16	CYP17A1 (ENSNLEG00000015210) #17	BORCS7 (ENSNLEG00000028788) #18	AS3MT (ENSNLEG00000015217)	CNNM2 (ENSNLEG00000015219) #19	NT5C2 (ENSNLEG00000015225) #20	ENSNLEG00000032264	INA (ENSNLEG00000015236) #22	ENSNLEG00000033689 #21	TAF5 (ENSNLEG00000015245) #23	ATP5MK (ENSNLEG00000032755) #24	PDCD11 (ENSNLEG00000026700) #25	CALHM2 (ENSNLEG00000015261) #26	CALHM1 (ENSNLEG00000015263) #27	ENSNLEG00000028327 #28	NEURL1 (ENSNLEG00000015266) #29	SH3PXD2A (ENSNLEG00000015269) #30	STN1 (ENSNLEG00000015282) #31	SLK (ENSNLEG00000015288) #33	COL17A1 (ENSNLEG00000015299) #34	SFR1 (ENSNLEG00000028704) #36	CFAP43 (ENSNLEG00000015332) #37	GSTO1 (ENSNLEG00000015358)
Cercopithecidae	DUPLICATION
Cercopithecidae	DUPLICATION
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT00940000154418.a.a.i.a #22
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00940000154418.a.a.i.a #22
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a.i.a #22	ENSGT00910000146943.a	ENSGT00940000154418.a.a.j #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34
Cercopithecinae_b	ANCESTRAL SPECIES	153																ENSGT00940000154418.a.a.i.a #22	ENSGT00910000146943.a
Cercopithecinae_d	ANCESTRAL SPECIES	302																ENSGT00940000154418.a.a.i.a #22	ENSGT00910000146943.a
Sooty mangabey	MODERN SPECIES	480	TNFAIP6 (ENSCATG00000043098)	NMI (ENSCATG00000045259)	ENSCATG00000038471	RBM43 (ENSCATG00000029617)	RND3 (ENSCATG00000042453)	ENSCATG00000036472	MMADHC (ENSCATG00000043511)	LYPD6 (ENSCATG00000030657)	LYPD6B (ENSCATG00000033638)	KIF5C (ENSCATG00000045100)	EPC2 (ENSCATG00000045291)	MBD5 (ENSCATG00000040834)	ORC4 (ENSCATG00000045066)	ACVR2A (ENSCATG00000033685)	ENSCATG00000039190	ENSCATG00000012613 #22	ENSCATG00000012956	ZEB2 (ENSCATG00000038567)	ENSCATG00000017157	GTDC1 (ENSCATG00000040626)	ENSCATG00000042700	ARHGAP15 (ENSCATG00000036437)	KYNU (ENSCATG00000038620)	ENSCATG00000013264	LRP1B (ENSCATG00000014557)	ENSCATG00000007439	ENSCATG00000004097	NXPH2 (ENSCATG00000006119)	SPOPL (ENSCATG00000045289)	ENSCATG00000042403
Drill	MODERN SPECIES	1617													ORC4 (ENSMLEG00000041166)	ACVR2A (ENSMLEG00000029150)	ENSMLEG00000038813	ENSMLEG00000034277 #22	ENSMLEG00000024843
Macaca	ANCESTRAL SPECIES																	ENSGT00940000154418.a.a.i.a #22
Pig-tailed macaque	MODERN SPECIES	193	TNFAIP6 (ENSMNEG00000005810)	NMI (ENSMNEG00000036210)	ENSMNEG00000043989	RBM43 (ENSMNEG00000030900)	RND3 (ENSMNEG00000034976)	ENSMNEG00000033300	MMADHC (ENSMNEG00000036865)	LYPD6 (ENSMNEG00000014126)	LYPD6B (ENSMNEG00000036224)	KIF5C (ENSMNEG00000022981)	EPC2 (ENSMNEG00000039186)	MBD5 (ENSMNEG00000029374)	ORC4 (ENSMNEG00000031287)	ACVR2A (ENSMNEG00000043553)	ENSMNEG00000036514	ENSMNEG00000033956 #22	ENSMNEG00000007339
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00940000154418.a.a.i.a #22
Black snub-nosed monkey	MODERN SPECIES	1336													ENSRBIG00000021813	ORC4 (ENSRBIG00000038574)	ACVR2A (ENSRBIG00000042755)	ENSRBIG00000037237 #22
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a.i.b #22	ENSGT00910000146943	ENSGT00940000154418.a.a.j #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34
Rhinopithecus	ANCESTRAL SPECIES	11	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a.j #22	ENSGT00910000146943	ENSGT00940000154418.a.a.i.b #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Black snub-nosed monkey	MODERN SPECIES	1538	PSD (ENSRBIG00000042590)	FBXL15 (ENSRBIG00000042023)	CUEDC2 (ENSRBIG00000043930) #7	ENSRBIG00000044237	ACTR1A (ENSRBIG00000035561) #10	SUFU (ENSRBIG00000041782) #11	TRIM8 (ENSRBIG00000032947) #13	ARL3 (ENSRBIG00000031934) #14	SFXN2 (ENSRBIG00000041623) #15	WBP1L (ENSRBIG00000028283) #16	CYP17A1 (ENSRBIG00000041280) #17	BORCS7 (ENSRBIG00000043045) #18	AS3MT (ENSRBIG00000038013)	CNNM2 (ENSRBIG00000037414) #19	NT5C2 (ENSRBIG00000044011) #20	ENSRBIG00000042921 #22	PCGF6 (ENSRBIG00000034630) #21	TAF5 (ENSRBIG00000043209) #23	ENSRBIG00000030165 #24	PDCD11 (ENSRBIG00000011889) #25	CALHM2 (ENSRBIG00000032217) #26	CALHM1 (ENSRBIG00000029567) #27	CALHM3 (ENSRBIG00000030795) #28	NEURL1 (ENSRBIG00000032145) #29	ENSRBIG00000044735	SH3PXD2A (ENSRBIG00000033834) #30	STN1 (ENSRBIG00000039819) #31	SLK (ENSRBIG00000037221) #33	COL17A1 (ENSRBIG00000018038) #34	SFR1 (ENSRBIG00000043888) #36	CFAP43 (ENSRBIG00000033041) #37
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a.i.b #22	ENSGT00910000146943	ENSGT00940000154418.a.a.j #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00390000018550 #36
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00910000146943	ENSGT00940000154418.a.a.j #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00390000018550 #36
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a.i.a #22	ENSGT00910000146943.a	ENSGT00940000154418.a.a.j #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00390000018550 #36
Macaca	ANCESTRAL SPECIES	11	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00910000146943.a	ENSGT00940000154418.a.a.j #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a.j #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351.bb.c
Crab-eating macaque	MODERN SPECIES	19	NFKB2 (ENSMFAG00000031139)	PSD (ENSMFAG00000000282)	FBXL15 (ENSMFAG00000033584)	CUEDC2 (ENSMFAG00000035328) #7	MFSD13A (ENSMFAG00000041523) #8	ACTR1A (ENSMFAG00000041926) #10	SUFU (ENSMFAG00000038634) #11	TRIM8 (ENSMFAG00000046181) #13	ARL3 (ENSMFAG00000057536) #14	SFXN2 (ENSMFAG00000045149) #15	WBP1L (ENSMFAG00000042677) #16	CYP17A1 (ENSMFAG00000002033) #17	BORCS7 (ENSMFAG00000044610) #18	AS3MT (ENSMFAG00000039839)	NT5C2 (ENSMFAG00000035950) #20	INA (ENSMFAG00000040504) #22	PCGF6 (ENSMFAG00000001835) #21	TAF5 (ENSMFAG00000031468) #23	PDCD11 (ENSMFAG00000044058) #25	CALHM2 (ENSMFAG00000002974) #26	CALHM1 (ENSMFAG00000032380) #27	CALHM3 (ENSMFAG00000009610) #28	NEURL1 (ENSMFAG00000001140) #29	ENSMFAG00000030673	SH3PXD2A (ENSMFAG00000044985) #30	STN1 (ENSMFAG00000041817) #31	SLK (ENSMFAG00000007328) #33	COL17A1 (ENSMFAG00000038498) #34	SFR1 (ENSMFAG00000033346) #36	CFAP43 (ENSMFAG00000043638) #37	GSTO1 (ENSMFAG00000033599)
Rhesus	MODERN SPECIES	19	PITX3 (ENSMMUG00000056167)	GBF1 (ENSMMUG00000002985)	ENSMMUG00000003000 #7	MFSD13A (ENSMMUG00000011948) #8	ACTR1A (ENSMMUG00000011949) #10	SUFU (ENSMMUG00000004396) #11	TRIM8 (ENSMMUG00000004394) #13	ENSMMUG00000047000	ARL3 (ENSMMUG00000060039) #14	SFXN2 (ENSMMUG00000052989) #16	CYP17A1 (ENSMMUG00000017601) #17	BORCS7 (ENSMMUG00000007660) #18	AS3MT (ENSMMUG00000007662)	CNNM2 (ENSMMUG00000003747) #19	NT5C2 (ENSMMUG00000003749) #20	INA (ENSMMUG00000008872) #22	PCGF6 (ENSMMUG00000008873) #21	TAF5 (ENSMMUG00000011523) #23	PDCD11 (ENSMMUG00000007058) #25	CALHM2 (ENSMMUG00000007061) #26	CALHM1 (ENSMMUG00000058129) #27	CALHM3 (ENSMMUG00000061162) #28	NEURL1 (ENSMMUG00000007064) #29	ENSMMUG00000058427	SH3PXD2A (ENSMMUG00000007067) #30	STN1 (ENSMMUG00000015323) #31	SLK (ENSMMUG00000015324) #33	COL17A1 (ENSMMUG00000015325) #34	SFR1 (ENSMMUG00000044990) #36	CFAP43 (ENSMMUG00000059603) #37	GSTO1 (ENSMMUG00000015334)
Pig-tailed macaque	MODERN SPECIES	550	CUEDC2 (ENSMNEG00000041547) #7	MFSD13A (ENSMNEG00000029124) #8	ACTR1A (ENSMNEG00000028948) #10	SUFU (ENSMNEG00000034125) #11	TRIM8 (ENSMNEG00000038779) #13	ENSMNEG00000020915	ARL3 (ENSMNEG00000041783) #14	SFXN2 (ENSMNEG00000032769) #15	WBP1L (ENSMNEG00000017708) #16	CYP17A1 (ENSMNEG00000041088) #17	BORCS7 (ENSMNEG00000037640) #18	AS3MT (ENSMNEG00000036598)	CNNM2 (ENSMNEG00000032018) #19	NT5C2 (ENSMNEG00000036765) #20	ENSMNEG00000027383	INA (ENSMNEG00000043059) #22	PCGF6 (ENSMNEG00000030820) #21	TAF5 (ENSMNEG00000035603) #23	ATP5MK (ENSMNEG00000035593) #24	PDCD11 (ENSMNEG00000040726) #25	CALHM2 (ENSMNEG00000011289) #26	CALHM1 (ENSMNEG00000030938) #27	CALHM3 (ENSMNEG00000028186) #28	NEURL1 (ENSMNEG00000037296) #29	ENSMNEG00000007571	SH3PXD2A (ENSMNEG00000031119) #30	STN1 (ENSMNEG00000031906) #31	SLK (ENSMNEG00000032689) #33	COL17A1 (ENSMNEG00000030047) #34	SFR1 (ENSMNEG00000041579) #36	CFAP43 (ENSMNEG00000041229) #37
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a.j #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00390000018550 #36
Cercopithecinae_d	ANCESTRAL SPECIES	57	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a.j #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Sooty mangabey	MODERN SPECIES	598	PSD (ENSCATG00000029120)	FBXL15 (ENSCATG00000038266)	CUEDC2 (ENSCATG00000043008) #7	MFSD13A (ENSCATG00000032986) #8	ACTR1A (ENSCATG00000036491) #10	SUFU (ENSCATG00000039824) #11	TRIM8 (ENSCATG00000033750) #13	ARL3 (ENSCATG00000019333) #14	SFXN2 (ENSCATG00000035934) #15	WBP1L (ENSCATG00000041061) #16	CYP17A1 (ENSCATG00000041371) #17	BORCS7 (ENSCATG00000035080) #18	AS3MT (ENSCATG00000037118)	CNNM2 (ENSCATG00000041464) #19	NT5C2 (ENSCATG00000030773) #20	INA (ENSCATG00000038727) #22	PCGF6 (ENSCATG00000041896) #21	TAF5 (ENSCATG00000038549) #23	ATP5MK (ENSCATG00000039772) #24	PDCD11 (ENSCATG00000044331) #25	CALHM2 (ENSCATG00000041923) #26	CALHM1 (ENSCATG00000044820) #27	CALHM3 (ENSCATG00000034360) #28	NEURL1 (ENSCATG00000041066) #29	ENSCATG00000009792	SH3PXD2A (ENSCATG00000028223) #30	STN1 (ENSCATG00000043103) #31	SLK (ENSCATG00000031756) #33	COL17A1 (ENSCATG00000043526) #34	SFR1 (ENSCATG00000029645) #36	CFAP43 (ENSCATG00000030702) #37
Olive baboon	MODERN SPECIES	2	PSD (ENSPANG00000021011)	FBXL15 (ENSPANG00000021009)	CUEDC2 (ENSPANG00000020984) #7	MFSD13A (ENSPANG00000020985) #8	ACTR1A (ENSPANG00000020986) #10	SUFU (ENSPANG00000020987) #11	TRIM8 (ENSPANG00000020989) #13	ARL3 (ENSPANG00000033639) #14	SFXN2 (ENSPANG00000020991) #15	WBP1L (ENSPANG00000051243) #16	CYP17A1 (ENSPANG00000020982) #17	BORCS7 (ENSPANG00000020979) #18	AS3MT (ENSPANG00000020981)	CNNM2 (ENSPANG00000020976) #19	NT5C2 (ENSPANG00000020954) #20	INA (ENSPANG00000020956) #22	PCGF6 (ENSPANG00000020957) #21	TAF5 (ENSPANG00000020958) #23	ENSPANG00000034679 #24	PDCD11 (ENSPANG00000020959) #25	CALHM2 (ENSPANG00000048513) #26	CALHM1 (ENSPANG00000020961) #27	CALHM3 (ENSPANG00000051037) #28	NEURL1 (ENSPANG00000020952) #29	ENSPANG00000043974	SH3PXD2A (ENSPANG00000020925) #30	STN1 (ENSPANG00000020926) #31	SLK (ENSPANG00000020927) #33	COL17A1 (ENSPANG00000020929) #34	ENSPANG00000043305	SFR1 (ENSPANG00000020932) #36
Vervet Monkey	MODERN SPECIES	28	CUEDC2 (ENSCSAG00000005434) #7	FBXL15 (ENSCSAG00000005432)	MFSD13A (ENSCSAG00000005428) #8	ACTR1A (ENSCSAG00000005419) #10	SUFU (ENSCSAG00000005416) #11	TRIM8 (ENSCSAG00000005411) #13	ARL3 (ENSCSAG00000005408) #14	SFXN2 (ENSCSAG00000005403) #15	ENSCSAG00000005399 #16	CYP17A1 (ENSCSAG00000005397) #17	BORCS7 (ENSCSAG00000005395) #18	AS3MT (ENSCSAG00000005391)	CNNM2 (ENSCSAG00000005384) #19	NT5C2 (ENSCSAG00000005380) #20	ENSCSAG00000005374	INA (ENSCSAG00000005368) #22	PCGF6 (ENSCSAG00000005362) #21	TAF5 (ENSCSAG00000005356) #23	ATP5MK (ENSCSAG00000005353) #24	PDCD11 (ENSCSAG00000005346) #25	CALHM2 (ENSCSAG00000005340) #26	CALHM1 (ENSCSAG00000005337) #27	CALHM3 (ENSCSAG00000005334) #28	NEURL1 (ENSCSAG00000005330) #29	SH3PXD2A (ENSCSAG00000005326) #30	STN1 (ENSCSAG00000005318) #31	SLK (ENSCSAG00000005313) #33	COL17A1 (ENSCSAG00000005300) #34	SFR1 (ENSCSAG00000005258) #36	CFAP43 (ENSCSAG00000005256) #37	ENSCSAG00000005249
Rhinopithecus	ANCESTRAL SPECIES	11	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a.j #22	ENSGT00910000146943	ENSGT00940000154418.a.a.i.b #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00910000147434	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34
Golden snub-nosed monkey	MODERN SPECIES	3053	PSD (ENSRROG00000041323)	FBXL15 (ENSRROG00000033504)	CUEDC2 (ENSRROG00000044234) #7	MFSD13A (ENSRROG00000031926) #8	ACTR1A (ENSRROG00000039390) #10	SUFU (ENSRROG00000008851) #11	TRIM8 (ENSRROG00000030582) #13	ARL3 (ENSRROG00000030757) #14	SFXN2 (ENSRROG00000028643) #15	WBP1L (ENSRROG00000035869) #16	CYP17A1 (ENSRROG00000039877) #17	BORCS7 (ENSRROG00000030916) #18	AS3MT (ENSRROG00000030773)	CNNM2 (ENSRROG00000041690) #19	NT5C2 (ENSRROG00000040128) #20	INA (ENSRROG00000044855) #22	ENSRROG00000027343	PCGF6 (ENSRROG00000030643) #21	TAF5 (ENSRROG00000040494) #23	ENSRROG00000043783 #24	PDCD11 (ENSRROG00000030483) #25	CALHM2 (ENSRROG00000039430) #26	CALHM1 (ENSRROG00000011380) #27	CALHM3 (ENSRROG00000010205) #28	NEURL1 (ENSRROG00000042825) #29	SH3PXD2A (ENSRROG00000044760) #30	STN1 (ENSRROG00000013903) #31	SLK (ENSRROG00000039991) #33	COL17A1 (ENSRROG00000031066) #34	SFR1 (ENSRROG00000024116) #36	CFAP43 (ENSRROG00000032126) #37
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184.c #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Bushbaby	MODERN SPECIES	136	FBXL15 (ENSOGAG00000016397)	CUEDC2 (ENSOGAG00000016405) #7	MFSD13A (ENSOGAG00000000319) #8	ACTR1A (ENSOGAG00000004838) #10	ENSOGAG00000002647	SUFU (ENSOGAG00000004840) #11	TRIM8 (ENSOGAG00000003628) #13	ARL3 (ENSOGAG00000003631) #14	SFXN2 (ENSOGAG00000003633) #15	WBP1L (ENSOGAG00000003309) #16	CYP17A1 (ENSOGAG00000013530) #17	BORCS7 (ENSOGAG00000032692) #18	AS3MT (ENSOGAG00000004341)	CNNM2 (ENSOGAG00000004343) #19	ENSOGAG00000004346	INA (ENSOGAG00000029454) #22	PCGF6 (ENSOGAG00000017097) #21	TAF5 (ENSOGAG00000008680) #23	PDCD11 (ENSOGAG00000008683) #25	CALHM2 (ENSOGAG00000008704) #26	CALHM1 (ENSOGAG00000032146) #27	CALHM3 (ENSOGAG00000008708) #28	ENSOGAG00000025475	NEURL1 (ENSOGAG00000008711) #29	SH3PXD2A (ENSOGAG00000008718) #30	STN1 (ENSOGAG00000008722) #31	SLK (ENSOGAG00000017119) #33	COL17A1 (ENSOGAG00000017124) #34	CFAP43 (ENSOGAG00000017132) #37	GSTO1 (ENSOGAG00000016045)	GSTO2 (ENSOGAG00000016437)
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849.c #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184.c #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Mouse lemur	MODERN SPECIES	6	PSD (ENSMICG00000011877)	FBXL15 (ENSMICG00000042452)	CUEDC2 (ENSMICG00000043889) #7	MFSD13A (ENSMICG00000011904) #8	ACTR1A (ENSMICG00000011929) #10	SUFU (ENSMICG00000012221) #11	TRIM8 (ENSMICG00000031109) #13	ARL3 (ENSMICG00000012249) #14	SFXN2 (ENSMICG00000012256) #15	WBP1L (ENSMICG00000012267) #16	CYP17A1 (ENSMICG00000012275) #17	ENSMICG00000047930 #18	AS3MT (ENSMICG00000012292)	CNNM2 (ENSMICG00000012298) #19	ENSMICG00000012316 #20	INA (ENSMICG00000000504) #22	PCGF6 (ENSMICG00000034497) #21	TAF5 (ENSMICG00000012393) #23	ATP5MK (ENSMICG00000012417) #24	PDCD11 (ENSMICG00000012421) #25	CALHM2 (ENSMICG00000012493) #26	CALHM1 (ENSMICG00000027967) #27	CALHM3 (ENSMICG00000041906) #28	NEURL1 (ENSMICG00000012507) #29	SH3PXD2A (ENSMICG00000012520) #30	STN1 (ENSMICG00000012547) #31	SLK (ENSMICG00000004384) #33	COL17A1 (ENSMICG00000004394) #34	SFR1 (ENSMICG00000037306) #36	CFAP43 (ENSMICG00000004417) #37	GSTO1 (ENSMICG00000026906)
Lemuriformes_a	ANCESTRAL SPECIES	21	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849.c #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184.c #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Coquerels sifaka	MODERN SPECIES	870	PSD (ENSPCOG00000014657)	FBXL15 (ENSPCOG00000025091)	CUEDC2 (ENSPCOG00000028615) #7	MFSD13A (ENSPCOG00000003583) #8	ACTR1A (ENSPCOG00000020914) #10	SUFU (ENSPCOG00000015700) #11	TRIM8 (ENSPCOG00000001337) #13	ARL3 (ENSPCOG00000024271) #14	SFXN2 (ENSPCOG00000024349) #15	WBP1L (ENSPCOG00000020010) #16	CYP17A1 (ENSPCOG00000003691) #17	ENSPCOG00000014724 #18	AS3MT (ENSPCOG00000019900)	CNNM2 (ENSPCOG00000017458) #19	NT5C2 (ENSPCOG00000015418) #20	INA (ENSPCOG00000028040) #22	PCGF6 (ENSPCOG00000027010) #21	TAF5 (ENSPCOG00000002819) #23	ATP5MK (ENSPCOG00000023807) #24	PDCD11 (ENSPCOG00000023327) #25	CALHM2 (ENSPCOG00000017708) #26	CALHM1 (ENSPCOG00000015513) #27	CALHM3 (ENSPCOG00000025456) #28	NEURL1 (ENSPCOG00000015128) #29	SH3PXD2A (ENSPCOG00000015981) #30	STN1 (ENSPCOG00000017648) #31	SLK (ENSPCOG00000016155) #33	COL17A1 (ENSPCOG00000016202) #34	SFR1 (ENSPCOG00000024305) #36	CFAP43 (ENSPCOG00000023452) #37	GSTO2 (ENSPCOG00000014365)
Greater bamboo lemur	MODERN SPECIES	194	C10orf95 (ENSPSMG00000011751) #9	MFSD13A (ENSPSMG00000011762) #8	ACTR1A (ENSPSMG00000011873) #10	SUFU (ENSPSMG00000011988) #11	ENSPSMG00000012010	TRIM8 (ENSPSMG00000012037) #13	ARL3 (ENSPSMG00000012052) #14	SFXN2 (ENSPSMG00000012074) #15	WBP1L (ENSPSMG00000012116) #16	CYP17A1 (ENSPSMG00000012142) #17	BORCS7 (ENSPSMG00000012149) #18	AS3MT (ENSPSMG00000012188)	CNNM2 (ENSPSMG00000012210) #19	ENSPSMG00000012219	ENSPSMG00000012304	INA (ENSPSMG00000012332) #22	PCGF6 (ENSPSMG00000012356) #21	TAF5 (ENSPSMG00000012382) #23	ATP5MK (ENSPSMG00000012393) #24	PDCD11 (ENSPSMG00000012508) #25	CALHM2 (ENSPSMG00000012544) #26	CALHM1 (ENSPSMG00000012549) #27	CALHM3 (ENSPSMG00000012562) #28	NEURL1 (ENSPSMG00000012575) #29	SH3PXD2A (ENSPSMG00000012614) #30	STN1 (ENSPSMG00000012647) #31	SLK (ENSPSMG00000012717) #33	COL17A1 (ENSPSMG00000012758) #34	SFR1 (ENSPSMG00000012770) #36	CFAP43 (ENSPSMG00000012803) #37	GSTO1 (ENSPSMG00000012842)
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT00390000014952	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Glires	ANCESTRAL SPECIES	16	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Lagomorpha	ANCESTRAL SPECIES	17	ENSGT00390000014513 #7	ENSGT00500000045093	ENSGT00940000166473	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Rabbit	MODERN SPECIES	9	CUEDC2 (ENSOCUG00000023995) #7	FBXL15 (ENSOCUG00000005764)	MFSD13A (ENSOCUG00000005770) #8	ACTR1A (ENSOCUG00000005779) #10	SUFU (ENSOCUG00000005781) #11	TRIM8 (ENSOCUG00000005786) #13	ARL3 (ENSOCUG00000005792) #14	SFXN2 (ENSOCUG00000025541) #15	WBP1L (ENSOCUG00000021890) #16	CYP17A1 (ENSOCUG00000017790) #17	ENSOCUG00000023839	ENSOCUG00000037788 #18	AS3MT (ENSOCUG00000000626)	CNNM2 (ENSOCUG00000009098) #19	ENSOCUG00000009107	INA (ENSOCUG00000004969) #22	PCGF6 (ENSOCUG00000012441) #21	TAF5 (ENSOCUG00000006303) #23	ENSOCUG00000033131 #24	PDCD11 (ENSOCUG00000006312) #25	CALHM2 (ENSOCUG00000006336) #26	CALHM1 (ENSOCUG00000027986) #27	CALHM3 (ENSOCUG00000025668) #28	NEURL1 (ENSOCUG00000013760) #29	SH3PXD2A (ENSOCUG00000013769) #30	ENSOCUG00000037086	STN1 (ENSOCUG00000003028) #31	ENSOCUG00000038741	SLK (ENSOCUG00000003035) #33	COL17A1 (ENSOCUG00000003049) #34	SFR1 (ENSOCUG00000012794) #36
Rodentia	ANCESTRAL SPECIES	16	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT01100000267139	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Sciuridae	ANCESTRAL SPECIES	21	ENSGT01100000267139	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Eurasian red squirrel	MODERN SPECIES	13	PSD (ENSSVLG00005004064)	FBXL15 (ENSSVLG00005004039)	CUEDC2 (ENSSVLG00005004017) #7	MFSD13A (ENSSVLG00005003972) #8	ACTR1A (ENSSVLG00005003935) #10	ENSSVLG00005003897 #11	TRIM8 (ENSSVLG00005003874) #13	ARL3 (ENSSVLG00005003847) #14	SFXN2 (ENSSVLG00005003816) #15	ENSSVLG00005003793 #16	CYP17A1 (ENSSVLG00005003699) #17	BORCS7 (ENSSVLG00005003641) #18	AS3MT (ENSSVLG00005003598)	CNNM2 (ENSSVLG00005003556) #19	NT5C2 (ENSSVLG00005003493) #20	INA (ENSSVLG00005003457) #22	PCGF6 (ENSSVLG00005003419) #21	TAF5 (ENSSVLG00005003365) #23	ENSSVLG00005003341 #24	ENSSVLG00005003328	PDCD11 (ENSSVLG00005003201) #25	CALHM2 (ENSSVLG00005003154) #26	CALHM1 (ENSSVLG00005003146) #27	CALHM3 (ENSSVLG00005003127) #28	NEURL1 (ENSSVLG00005003109) #29	ENSSVLG00005003038 #30	STN1 (ENSSVLG00005002979) #31	SLK (ENSSVLG00005002929) #33	COL17A1 (ENSSVLG00005002694) #34	ENSSVLG00005002622 #36	CFAP43 (ENSSVLG00005002510) #37
Marmotini	ANCESTRAL SPECIES	16	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Alpin marmot	MODERN SPECIES	39	ENSMMMG00000023323	FBXL15 (ENSMMMG00000023324)	CUEDC2 (ENSMMMG00000023329) #7	MFSD13A (ENSMMMG00000023338) #8	ACTR1A (ENSMMMG00000023344) #10	SUFU (ENSMMMG00000023355) #11	TRIM8 (ENSMMMG00000023360) #13	ENSMMMG00000023361 #14	SFXN2 (ENSMMMG00000023370) #15	ENSMMMG00000023372 #16	CYP17A1 (ENSMMMG00000023378) #17	BORCS7 (ENSMMMG00000023381) #18	AS3MT (ENSMMMG00000023383)	CNNM2 (ENSMMMG00000023389) #19	NT5C2 (ENSMMMG00000023399) #20	INA (ENSMMMG00000023409) #22	ENSMMMG00000023410 #21	TAF5 (ENSMMMG00000023414) #23	ENSMMMG00000023417 #24	PDCD11 (ENSMMMG00000000038) #25	CALHM2 (ENSMMMG00000000103) #26	CALHM1 (ENSMMMG00000000112) #27	CALHM3 (ENSMMMG00000000131) #28	NEURL1 (ENSMMMG00000000158) #29	SH3PXD2A (ENSMMMG00000000203) #30	STN1 (ENSMMMG00000000299) #31	SLK (ENSMMMG00000000361) #33	COL17A1 (ENSMMMG00000000492) #34	SFR1 (ENSMMMG00000000727) #36	CFAP43 (ENSMMMG00000000749) #37	ENSMMMG00000001103
Marmotini_b	ANCESTRAL SPECIES	76	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Squirrel	MODERN SPECIES	200	PSD (ENSSTOG00000021577)	FBXL15 (ENSSTOG00000022528)	CUEDC2 (ENSSTOG00000022008) #7	MFSD13A (ENSSTOG00000014428) #8	ACTR1A (ENSSTOG00000014434) #10	SUFU (ENSSTOG00000026796) #11	TRIM8 (ENSSTOG00000008270) #13	ARL3 (ENSSTOG00000014453) #14	SFXN2 (ENSSTOG00000014456) #15	ENSSTOG00000026185 #16	CYP17A1 (ENSSTOG00000014469) #17	BORCS7 (ENSSTOG00000019613) #18	AS3MT (ENSSTOG00000014490)	CNNM2 (ENSSTOG00000014497) #19	ENSSTOG00000012380	INA (ENSSTOG00000026141) #22	PCGF6 (ENSSTOG00000014511) #21	TAF5 (ENSSTOG00000014536) #23	ATP5MK (ENSSTOG00000029901) #24	PDCD11 (ENSSTOG00000014553) #25	CALHM2 (ENSSTOG00000014597) #26	CALHM1 (ENSSTOG00000014605) #27	CALHM3 (ENSSTOG00000025172) #28	NEURL1 (ENSSTOG00000023895) #29	SH3PXD2A (ENSSTOG00000007057) #30	STN1 (ENSSTOG00000011905) #31	SLK (ENSSTOG00000013329) #33	COL17A1 (ENSSTOG00000013352) #34	SFR1 (ENSSTOG00000013376) #36	ENSSTOG00000013381 #37	GSTO1 (ENSSTOG00000013401)
Arctic ground squirrel	MODERN SPECIES	239	PSD (ENSUPAG00010020628)	FBXL15 (ENSUPAG00010020619)	CUEDC2 (ENSUPAG00010020611) #7	MFSD13A (ENSUPAG00010020588) #8	ACTR1A (ENSUPAG00010020582) #10	SUFU (ENSUPAG00010020560) #11	TRIM8 (ENSUPAG00010020545) #13	ARL3 (ENSUPAG00010020532) #14	SFXN2 (ENSUPAG00010020522) #15	WBP1L (ENSUPAG00010020520) #16	CYP17A1 (ENSUPAG00010020514) #17	BORCS7 (ENSUPAG00010020508) #18	AS3MT (ENSUPAG00010020500)	CNNM2 (ENSUPAG00010020490) #19	NT5C2 (ENSUPAG00010020468) #20	INA (ENSUPAG00010020463) #22	PCGF6 (ENSUPAG00010020458) #21	TAF5 (ENSUPAG00010020451) #23	ATP5MK (ENSUPAG00010020448) #24	PDCD11 (ENSUPAG00010020419) #25	CALHM2 (ENSUPAG00010020415) #26	CALHM1 (ENSUPAG00010020414) #27	CALHM3 (ENSUPAG00010020411) #28	NEURL1 (ENSUPAG00010020402) #29	SH3PXD2A (ENSUPAG00010020358) #30	STN1 (ENSUPAG00010020348) #31	SLK (ENSUPAG00010020310) #33	COL17A1 (ENSUPAG00010020186) #34	SFR1 (ENSUPAG00010020181) #36	ENSUPAG00010020178 #37	GSTO1 (ENSUPAG00010020173)
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000041712	MFSD13A (ENSHGLG00000003127) #8	ACTR1A (ENSHGLG00000044976) #10	ENSHGLG00000002713	SUFU (ENSHGLG00000002357) #11	TRIM8 (ENSHGLG00000002932) #13	ENSHGLG00000003650 #15	ARL3 (ENSHGLG00000038237) #14	WBP1L (ENSHGLG00000036528) #16	CYP17A1 (ENSHGLG00000002087) #17	ENSHGLG00000036337 #18	ENSHGLG00000037019	ENSHGLG00000037786	CNNM2 (ENSHGLG00000002477) #19	NT5C2 (ENSHGLG00000003370) #20	INA (ENSHGLG00000002478) #22	ENSHGLG00000002539 #21	TAF5 (ENSHGLG00000002753) #23	ENSHGLG00000003034	ENSHGLG00000045467	PDCD11 (ENSHGLG00000001462) #25	CALHM2 (ENSHGLG00000002007) #26	CALHM1 (ENSHGLG00000002126) #27	CALHM3 (ENSHGLG00000002195) #28	NEURL1 (ENSHGLG00000001530) #29	SH3PXD2A (ENSHGLG00000002064) #30	STN1 (ENSHGLG00000002775) #31	SLK (ENSHGLG00000003084) #33	COL17A1 (ENSHGLG00000003598) #34	ENSHGLG00000033849 #36	CFAP43 (ENSHGLG00000035856) #37
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Guinea pig	MODERN SPECIES	11	NFKB2 (ENSCPOG00000004847)	PSD (ENSCPOG00000000156)	FBXL15 (ENSCPOG00000021451)	CUEDC2 (ENSCPOG00000032492) #7	MFSD13A (ENSCPOG00000011087) #8	ACTR1A (ENSCPOG00000011090) #10	SUFU (ENSCPOG00000011097) #11	TRIM8 (ENSCPOG00000012305) #13	ARL3 (ENSCPOG00000014473) #14	SFXN2 (ENSCPOG00000014474) #15	WBP1L (ENSCPOG00000033991) #16	CYP17A1 (ENSCPOG00000014546) #17	BORCS7 (ENSCPOG00000032430) #18	CNNM2 (ENSCPOG00000015746) #19	NT5C2 (ENSCPOG00000015748) #20	INA (ENSCPOG00000004030) #22	PCGF6 (ENSCPOG00000004021) #21	TAF5 (ENSCPOG00000005294) #23	ATP5MK (ENSCPOG00000005303) #24	PDCD11 (ENSCPOG00000010957) #25	CALHM2 (ENSCPOG00000040598) #26	CALHM1 (ENSCPOG00000010968) #27	CALHM3 (ENSCPOG00000013132) #28	NEURL1 (ENSCPOG00000006578) #29	SH3PXD2A (ENSCPOG00000006269) #30	STN1 (ENSCPOG00000006273) #31	SLK (ENSCPOG00000000992) #33	COL17A1 (ENSCPOG00000000997) #34	SFR1 (ENSCPOG00000001002) #36	CFAP43 (ENSCPOG00000001007) #37	GSTO1 (ENSCPOG00000001014)
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000168158	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Long-tailed chinchilla	MODERN SPECIES	192	FBXL15 (ENSCLAG00000001578)	CUEDC2 (ENSCLAG00000001551) #7	MFSD13A (ENSCLAG00000001530) #8	ACTR1A (ENSCLAG00000001321) #10	SUFU (ENSCLAG00000001257) #11	TRIM8 (ENSCLAG00000001092) #13	ARL3 (ENSCLAG00000001055) #14	SFXN2 (ENSCLAG00000001037) #15	WBP1L (ENSCLAG00000000978) #16	CYP17A1 (ENSCLAG00000000920) #17	BORCS7 (ENSCLAG00000001557) #18	AS3MT (ENSCLAG00000001482)	CNNM2 (ENSCLAG00000001443) #19	ENSCLAG00000017436	NT5C2 (ENSCLAG00000001259) #20	ENSCLAG00000001199 #22	PCGF6 (ENSCLAG00000001188) #21	TAF5 (ENSCLAG00000001063) #23	ATP5MK (ENSCLAG00000001049) #24	PDCD11 (ENSCLAG00000001029) #25	CALHM2 (ENSCLAG00000001846) #26	CALHM1 (ENSCLAG00000001842) #27	CALHM3 (ENSCLAG00000001834) #28	ENSCLAG00000001821 #29	SH3PXD2A (ENSCLAG00000001679) #30	STN1 (ENSCLAG00000001617) #31	SLK (ENSCLAG00000001596) #33	ENSCLAG00000001543	SFR1 (ENSCLAG00000001521) #36	CFAP43 (ENSCLAG00000001343) #37	ENSCLAG00000017434
Degu	MODERN SPECIES	83	ENSODEG00000006734	ENSODEG00000006833	ENSODEG00000008009	TRIM8 (ENSODEG00000006928) #13	ARL3 (ENSODEG00000008389) #14	SFXN2 (ENSODEG00000008868) #15	WBP1L (ENSODEG00000009321) #16	ENSODEG00000019732	ENSODEG00000008163	CYP17A1 (ENSODEG00000008480) #17	BORCS7 (ENSODEG00000009160) #18	AS3MT (ENSODEG00000008429)	CNNM2 (ENSODEG00000008114) #19	ENSODEG00000009282	NT5C2 (ENSODEG00000012028) #20	INA (ENSODEG00000008267) #22	PCGF6 (ENSODEG00000007645) #21	ENSODEG00000007978	TAF5 (ENSODEG00000009100) #23	ENSODEG00000009533 #24	PDCD11 (ENSODEG00000008079) #25	CALHM2 (ENSODEG00000008107) #26	CALHM1 (ENSODEG00000008264) #27	CALHM3 (ENSODEG00000007501) #28	NEURL1 (ENSODEG00000007869) #29	SH3PXD2A (ENSODEG00000009308) #30	STN1 (ENSODEG00000007270) #31	SLK (ENSODEG00000008144) #33	ENSODEG00000008493	COL17A1 (ENSODEG00000007918) #34	CFAP43 (ENSODEG00000009391) #37
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Chinese hamster chok1gshd	MODERN SPECIES	215	Psd (ENSCGRG00001000373)	Cuedc2 (ENSCGRG00001022970) #7	Fbxl15 (ENSCGRG00001022005)	Mfsd13a (ENSCGRG00001017917) #8	Actr1a (ENSCGRG00001013578) #10	Sufu (ENSCGRG00001006263) #11	Trim8 (ENSCGRG00001024342) #13	Arl3 (ENSCGRG00001020323) #14	Sfxn2 (ENSCGRG00001018053) #15	ENSCGRG00001012898 #16	Cyp17a1 (ENSCGRG00001019418) #17	Borcs7 (ENSCGRG00001018546) #18	As3mt (ENSCGRG00001009254)	Cnnm2 (ENSCGRG00001022341) #19	Nt5c2 (ENSCGRG00001021778) #20	Ina (ENSCGRG00001017461) #22	Pcgf6 (ENSCGRG00001007808) #21	ENSCGRG00001009088 #24	Taf5 (ENSCGRG00001008015) #23	Pdcd11 (ENSCGRG00001006458) #25	Calhm2 (ENSCGRG00001023936) #26	Calhm1 (ENSCGRG00001023224) #27	Calhm3 (ENSCGRG00001022306) #28	Neurl1a (ENSCGRG00001021464) #29	Sh3pxd2a (ENSCGRG00001019958) #30	Stn1 (ENSCGRG00001023175) #31	Slk (ENSCGRG00001015388) #33	Col17a1 (ENSCGRG00001022203) #34	ENSCGRG00001015549 #36	Cfap43 (ENSCGRG00001011254) #37	Gsto1 (ENSCGRG00001001908)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	16	Fbxl15 (ENSMOCG00000022420)	Cuedc2 (ENSMOCG00000001067) #7	Mfsd13a (ENSMOCG00000018673) #8	Actr1a (ENSMOCG00000020878) #10	Sufu (ENSMOCG00000016812) #11	Trim8 (ENSMOCG00000013735) #13	Arl3 (ENSMOCG00000015961) #14	Sfxn2 (ENSMOCG00000018233) #15	Wbp1l (ENSMOCG00000022618) #16	Cyp17a1 (ENSMOCG00000003696) #17	Borcs7 (ENSMOCG00000013474) #18	As3mt (ENSMOCG00000008340)	Cnnm2 (ENSMOCG00000015680) #19	ENSMOCG00000002709	Nt5c2 (ENSMOCG00000017482) #20	ENSMOCG00000015820 #22	Pcgf6 (ENSMOCG00000014072) #21	Taf5 (ENSMOCG00000014640) #23	ENSMOCG00000013733 #24	Pdcd11 (ENSMOCG00000021792) #25	Calhm2 (ENSMOCG00000018955) #26	Calhm1 (ENSMOCG00000000659) #27	Calhm3 (ENSMOCG00000021541) #28	Neurl1a (ENSMOCG00000022886) #29	Sh3pxd2a (ENSMOCG00000019474) #30	Stn1 (ENSMOCG00000009637) #31	Slk (ENSMOCG00000017350) #33	Col17a1 (ENSMOCG00000011193) #34	Sfr1 (ENSMOCG00000008461) #36	Cfap43 (ENSMOCG00000020363) #37	Gsto1 (ENSMOCG00000009660)
Prairie vole	MODERN SPECIES	14	Slc30a10 (ENSMOCG00000018487)	Lyplal1 (ENSMOCG00000019697)	Tgfb2 (ENSMOCG00000022415)	Rrp15 (ENSMOCG00000019339)	D1Pas1 (ENSMOCG00000002596)	Spata17 (ENSMOCG00000006657)	Gpatch2 (ENSMOCG00000020821)	ENSMOCG00000008935	Esrrg (ENSMOCG00000013956)	Kctd3 (ENSMOCG00000021391)	Kcnk2 (ENSMOCG00000018400)	Cenpf (ENSMOCG00000012377)	Ptpn14 (ENSMOCG00000010851)	Smyd2 (ENSMOCG00000000847)	Prox1 (ENSMOCG00000003310)	ENSMOCG00000014377 #22	Rps6kc1 (ENSMOCG00000021401)	Angel2 (ENSMOCG00000022027)	Vash2 (ENSMOCG00000002399)	Flvcr1 (ENSMOCG00000013229)	Spata45 (ENSMOCG00000017094)	Tatdn3 (ENSMOCG00000019831)	Nsl1 (ENSMOCG00000020317)	Batf3 (ENSMOCG00000020540)	Garin4 (ENSMOCG00000017084)	Atf3 (ENSMOCG00000019538)	Nenf (ENSMOCG00000010741)	Pacc1 (ENSMOCG00000015297)	Ppp2r5a (ENSMOCG00000018187)	ENSMOCG00000021658	Ints7 (ENSMOCG00000015050)
Northern American deer mouse	MODERN SPECIES		Psd (ENSPEMG00000010757)	Fbxl15 (ENSPEMG00000012550)	Cuedc2 (ENSPEMG00000012762) #7	Mfsd13a (ENSPEMG00000016696) #8	Actr1a (ENSPEMG00000006737) #10	Sufu (ENSPEMG00000009470) #11	Trim8 (ENSPEMG00000027998) #13	Arl3 (ENSPEMG00000012608) #14	Sfxn2 (ENSPEMG00000012438) #15	Wbp1l (ENSPEMG00000002955) #16	Cyp17a1 (ENSPEMG00000016883) #17	Borcs7 (ENSPEMG00000030674) #18	As3mt (ENSPEMG00000011699)	Cnnm2 (ENSPEMG00000017920) #19	Nt5c2 (ENSPEMG00000003970) #20	Ina (ENSPEMG00000007890) #22	Pcgf6 (ENSPEMG00000003171) #21	Taf5 (ENSPEMG00000002770) #23	ENSPEMG00000000483 #24	Pdcd11 (ENSPEMG00000010315) #25	Calhm2 (ENSPEMG00000016278) #26	Calhm1 (ENSPEMG00000010575) #27	Calhm3 (ENSPEMG00000018627) #28	Neurl1a (ENSPEMG00000000552) #29	Sh3pxd2a (ENSPEMG00000028132) #30	Stn1 (ENSPEMG00000013944) #31	Slk (ENSPEMG00000003363) #33	Col17a1 (ENSPEMG00000010272) #34	ENSPEMG00000010098 #36	Cfap43 (ENSPEMG00000007262) #37	ENSPEMG00000000407
Murinae	ANCESTRAL SPECIES		ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Mus	ANCESTRAL SPECIES		ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000162950.c	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000162950.c	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000162950.c	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Mus_C	ANCESTRAL SPECIES	24	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000162950.c	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
spretus	MODERN SPECIES	10	Psd (MGP_SPRETEiJ_G0023953)	Fbxl15 (MGP_SPRETEiJ_G0023954)	Cuedc2 (MGP_SPRETEiJ_G0023955) #7	Mfsd13a (MGP_SPRETEiJ_G0023956) #8	Actr1a (MGP_SPRETEiJ_G0023957) #10	Sufu (MGP_SPRETEiJ_G0023958) #11	Trim8 (MGP_SPRETEiJ_G0023959) #13	Arl3 (MGP_SPRETEiJ_G0023960) #14	Sfxn2 (MGP_SPRETEiJ_G0023961) #15	Wbp1l (MGP_SPRETEiJ_G0023962) #16	Cyp17a1 (MGP_SPRETEiJ_G0023963) #17	Borcs7 (MGP_SPRETEiJ_G0023964) #18	As3mt (MGP_SPRETEiJ_G0023965)	Cnnm2 (MGP_SPRETEiJ_G0023966) #19	Nt5c2 (MGP_SPRETEiJ_G0023967) #20	Ina (MGP_SPRETEiJ_G0023968) #22	Pcgf6 (MGP_SPRETEiJ_G0023969) #21	Taf5 (MGP_SPRETEiJ_G0023970) #23	Pdcd11 (MGP_SPRETEiJ_G0023971) #25	Calhm2 (MGP_SPRETEiJ_G0023972) #26	Calhm1 (MGP_SPRETEiJ_G0023973) #27	MGP_SPRETEiJ_G0023974 #28	MGP_SPRETEiJ_G0023975	Neurl1a (MGP_SPRETEiJ_G0023976) #29	Sh3pxd2a (MGP_SPRETEiJ_G0023977) #30	Stn1 (MGP_SPRETEiJ_G0023978) #31	Slk (MGP_SPRETEiJ_G0023979) #33	Col17a1 (MGP_SPRETEiJ_G0023980) #34	Sfr1 (MGP_SPRETEiJ_G0023981) #36	Cfap43 (MGP_SPRETEiJ_G0023982) #37	Gsto1 (MGP_SPRETEiJ_G0023983)
Steppe mouse	MODERN SPECIES	3428												ENSMSIG00000031515	As3mt (ENSMSIG00000031511)	Cnnm2 (ENSMSIG00000031498) #19	Nt5c2 (ENSMSIG00000031492) #20	Ina (ENSMSIG00000031490) #22	Pcgf6 (ENSMSIG00000031488) #21	Taf5 (ENSMSIG00000031481) #23	ENSMSIG00000031479 #24	Pdcd11 (ENSMSIG00000031474) #25	Calhm2 (ENSMSIG00000031473) #26	Calhm1 (ENSMSIG00000031472) #27	Calhm3 (ENSMSIG00000031471) #28	ENSMSIG00000031470	Neurl1a (ENSMSIG00000031466) #29	Sh3pxd2a (ENSMSIG00000031465) #30	Stn1 (ENSMSIG00000031463) #31	Slk (ENSMSIG00000031453) #33	Col17a1 (ENSMSIG00000031440) #34	Sfr1 (ENSMSIG00000031436) #36	Cfap43 (ENSMSIG00000031434) #37
Mouse	MODERN SPECIES	10	Fbxl15 (ENSMUSG00000025226)	Cuedc2 (ENSMUSG00000036748) #7	Mfsd13a (ENSMUSG00000025227) #8	2310034G01Rik (ENSMUSG00000099655) #9	Actr1a (ENSMUSG00000025228) #10	Sufu (ENSMUSG00000025231) #11	Trim8 (ENSMUSG00000025034) #13	Arl3 (ENSMUSG00000025035) #14	Sfxn2 (ENSMUSG00000025036) #15	Wbp1l (ENSMUSG00000047731) #16	Cyp17a1 (ENSMUSG00000003555) #17	Borcs7 (ENSMUSG00000062376) #18	As3mt (ENSMUSG00000003559)	Cnnm2 (ENSMUSG00000064105) #19	Nt5c2 (ENSMUSG00000025041) #20	Ina (ENSMUSG00000034336) #22	Pcgf6 (ENSMUSG00000025050) #21	Taf5 (ENSMUSG00000025049) #23	Atp5md (ENSMUSG00000071528) #24	Pdcd11 (ENSMUSG00000025047) #25	Calhm2 (ENSMUSG00000033033) #26	Calhm1 (ENSMUSG00000079258) #27	Calhm3 (ENSMUSG00000094219) #28	Neurl1a (ENSMUSG00000006435) #29	Sh3pxd2a (ENSMUSG00000053617) #30	Stn1 (ENSMUSG00000042694) #31	Slk (ENSMUSG00000025060) #33	Col17a1 (ENSMUSG00000025064) #34	Sfr1 (ENSMUSG00000025066) #36	Cfap43 (ENSMUSG00000044948) #37	Gsto1 (ENSMUSG00000025068)
Ryukyu mouse	MODERN SPECIES	10	Psd (MGP_CAROLIEiJ_G0023032)	Fbxl15 (MGP_CAROLIEiJ_G0023033)	Cuedc2 (MGP_CAROLIEiJ_G0023034) #7	Mfsd13a (MGP_CAROLIEiJ_G0023035) #8	Actr1a (MGP_CAROLIEiJ_G0023036) #10	Sufu (MGP_CAROLIEiJ_G0023037) #11	Trim8 (MGP_CAROLIEiJ_G0023038) #13	Arl3 (MGP_CAROLIEiJ_G0023039) #14	Sfxn2 (MGP_CAROLIEiJ_G0023040) #15	Wbp1l (MGP_CAROLIEiJ_G0023041) #16	MGP_CAROLIEiJ_G0023042 #17	Borcs7 (MGP_CAROLIEiJ_G0023043) #18	As3mt (MGP_CAROLIEiJ_G0023044)	Cnnm2 (MGP_CAROLIEiJ_G0023045) #19	Nt5c2 (MGP_CAROLIEiJ_G0023046) #20	Ina (MGP_CAROLIEiJ_G0023047) #22	Pcgf6 (MGP_CAROLIEiJ_G0023048) #21	Taf5 (MGP_CAROLIEiJ_G0023049) #23	Pdcd11 (MGP_CAROLIEiJ_G0023050) #25	Calhm2 (MGP_CAROLIEiJ_G0023051) #26	Calhm1 (MGP_CAROLIEiJ_G0023052) #27	Calhm3 (MGP_CAROLIEiJ_G0023053) #28	MGP_CAROLIEiJ_G0023054	Neurl1a (MGP_CAROLIEiJ_G0023055) #29	Sh3pxd2a (MGP_CAROLIEiJ_G0023056) #30	Stn1 (MGP_CAROLIEiJ_G0023057) #31	Slk (MGP_CAROLIEiJ_G0023058) #33	Col17a1 (MGP_CAROLIEiJ_G0023059) #34	Sfr1 (MGP_CAROLIEiJ_G0023060) #36	Itprip (MGP_CAROLIEiJ_G0023061)	Gsto1 (MGP_CAROLIEiJ_G0023062)
Shrew mouse	MODERN SPECIES		Nfkb2 (MGP_PahariEiJ_G0014521)	Psd (MGP_PahariEiJ_G0014522)	Fbxl15 (MGP_PahariEiJ_G0014523)	Cuedc2 (MGP_PahariEiJ_G0014524) #7	Mfsd13a (MGP_PahariEiJ_G0014525) #8	Actr1a (MGP_PahariEiJ_G0014526) #10	Sufu (MGP_PahariEiJ_G0014527) #11	Trim8 (MGP_PahariEiJ_G0014528) #13	Arl3 (MGP_PahariEiJ_G0014529) #14	Sfxn2 (MGP_PahariEiJ_G0014530) #15	Wbp1l (MGP_PahariEiJ_G0014531) #16	Cyp17a1 (MGP_PahariEiJ_G0014532) #17	Borcs7 (MGP_PahariEiJ_G0014533) #18	As3mt (MGP_PahariEiJ_G0014534)	Cnnm2 (MGP_PahariEiJ_G0014535) #19	Ina (MGP_PahariEiJ_G0014537) #22	Pcgf6 (MGP_PahariEiJ_G0014538) #21	Taf5 (MGP_PahariEiJ_G0014539) #23	Pdcd11 (MGP_PahariEiJ_G0014540) #25	Calhm2 (MGP_PahariEiJ_G0014541) #26	Calhm1 (MGP_PahariEiJ_G0014542) #27	Calhm3 (MGP_PahariEiJ_G0014543) #28	MGP_PahariEiJ_G0014544	Neurl1a (MGP_PahariEiJ_G0014545) #29	Sh3pxd2a (MGP_PahariEiJ_G0014546) #30	Stn1 (MGP_PahariEiJ_G0014547) #31	Slk (MGP_PahariEiJ_G0014548) #33	Col17a1 (MGP_PahariEiJ_G0014549) #34	Sfr1 (MGP_PahariEiJ_G0014550) #36	Cfap43 (MGP_PahariEiJ_G0014551) #37	Gsto1 (MGP_PahariEiJ_G0014552)
Rat	MODERN SPECIES		Fbxl15 (ENSRNOG00000019509)	Cuedc2 (ENSRNOG00000019574) #7	C1H10orf95 (ENSRNOG00000066499) #9	Mfsd13a (ENSRNOG00000019674) #8	Actr1a (ENSRNOG00000019725) #10	Sufu (ENSRNOG00000019807) #11	Trim8 (ENSRNOG00000019968) #13	Arl3 (ENSRNOG00000019973) #14	Sfxn2 (ENSRNOG00000066618) #15	Wbp1l (ENSRNOG00000020020) #16	Cyp17a1 (ENSRNOG00000020035) #17	Borcs7 (ENSRNOG00000020076) #18	As3mt (ENSRNOG00000020081)	Cnnm2 (ENSRNOG00000020113) #19	Nt5c2 (ENSRNOG00000020179) #20	Ina (ENSRNOG00000020248) #22	Pcgf6 (ENSRNOG00000020250) #21	Taf5 (ENSRNOG00000020274) #23	Atp5mk (ENSRNOG00000020296) #24	Pdcd11 (ENSRNOG00000020304) #25	Calhm2 (ENSRNOG00000020325) #26	Calhm1 (ENSRNOG00000030682) #27	Calhm3 (ENSRNOG00000026086) #28	Neurl1 (ENSRNOG00000020339) #29	Sh3pxd2a (ENSRNOG00000020353) #30	Stn1 (ENSRNOG00000020376) #31	Slk (ENSRNOG00000011339) #33	Col17a1 (ENSRNOG00000012110) #34	Sfr1 (ENSRNOG00000012641) #36	Cfap43 (ENSRNOG00000036585) #37	Gsto1 (ENSRNOG00000028746)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1300	Fbxl15 (ENSNGAG00000011400)	Cuedc2 (ENSNGAG00000021332) #7	Mfsd13a (ENSNGAG00000010719) #8	Actr1a (ENSNGAG00000012852) #10	Sufu (ENSNGAG00000022855) #11	Trim8 (ENSNGAG00000023166) #13	Arl3 (ENSNGAG00000024014) #14	Sfxn2 (ENSNGAG00000013387) #15	Wbp1l (ENSNGAG00000006319) #16	Cyp17a1 (ENSNGAG00000023337) #17	Borcs7 (ENSNGAG00000020067) #18	As3mt (ENSNGAG00000021235)	Cnnm2 (ENSNGAG00000021894) #19	Nt5c2 (ENSNGAG00000014147) #20	ENSNGAG00000020356	Ina (ENSNGAG00000023775) #22	Pcgf6 (ENSNGAG00000004236) #21	Taf5 (ENSNGAG00000019082) #23	Atp5md (ENSNGAG00000019237) #24	Pdcd11 (ENSNGAG00000018143) #25	Calhm2 (ENSNGAG00000021638) #26	Calhm1 (ENSNGAG00000022846) #27	Calhm3 (ENSNGAG00000003356) #28	Neurl1a (ENSNGAG00000008250) #29	Sh3pxd2a (ENSNGAG00000005200) #30	ENSNGAG00000022667	Stn1 (ENSNGAG00000023986) #31	Slk (ENSNGAG00000013115) #33	Col17a1 (ENSNGAG00000014613) #34	Gsto1 (ENSNGAG00000016801)	Gsto2 (ENSNGAG00000023312)
Lesser Egyptian jerboa	MODERN SPECIES	70	Fbxl15 (ENSJJAG00000018833)	Cuedc2 (ENSJJAG00000019898) #7	Mfsd13a (ENSJJAG00000019354) #8	Actr1a (ENSJJAG00000012214) #10	Sufu (ENSJJAG00000004811) #11	Trim8 (ENSJJAG00000022961) #13	Arl3 (ENSJJAG00000001249) #14	Sfxn2 (ENSJJAG00000020334) #15	Wbp1l (ENSJJAG00000005618) #16	Cyp17a1 (ENSJJAG00000020313) #17	ENSJJAG00000007546	Borcs7 (ENSJJAG00000019848) #18	As3mt (ENSJJAG00000017269)	Cnnm2 (ENSJJAG00000024042) #19	Nt5c2 (ENSJJAG00000023674) #20	Ina (ENSJJAG00000024219) #22	Taf5 (ENSJJAG00000002025) #23	Atp5md (ENSJJAG00000018060) #24	Pdcd11 (ENSJJAG00000015523) #25	Calhm2 (ENSJJAG00000017511) #26	Calhm1 (ENSJJAG00000009035) #27	Calhm3 (ENSJJAG00000022667) #28	Neurl1a (ENSJJAG00000015435) #29	Sh3pxd2a (ENSJJAG00000010532) #30	Stn1 (ENSJJAG00000020389) #31	Slk (ENSJJAG00000017467) #33	Col17a1 (ENSJJAG00000020946) #34	Cfap43 (ENSJJAG00000024398) #37	Gsto1 (ENSJJAG00000018251)	Gsto2 (ENSJJAG00000014900)	Itprip (ENSJJAG00000000469)
Kangaroo rat	MODERN SPECIES	355	Nfkb2 (ENSDORG00000013409)	Psd (ENSDORG00000013410)	Fbxl15 (ENSDORG00000013411)	Cuedc2 (ENSDORG00000013412) #7	Mfsd13a (ENSDORG00000013635) #8	Actr1a (ENSDORG00000027112) #10	Sufu (ENSDORG00000003105) #11	Trim8 (ENSDORG00000027571) #13	Arl3 (ENSDORG00000012086) #14	Sfxn2 (ENSDORG00000002258) #15	Wbp1l (ENSDORG00000002274) #16	Cyp17a1 (ENSDORG00000006774) #17	Borcs7 (ENSDORG00000004480) #18	As3mt (ENSDORG00000010407)	Nt5c2 (ENSDORG00000005467) #20	Ina (ENSDORG00000027651) #22	Pcgf6 (ENSDORG00000027870) #21	Taf5 (ENSDORG00000010418) #23	Atp5md (ENSDORG00000010419) #24	Pdcd11 (ENSDORG00000010420) #25	Calhm2 (ENSDORG00000010426) #26	Calhm1 (ENSDORG00000010427) #27	Calhm3 (ENSDORG00000010428) #28	Neurl1a (ENSDORG00000010429) #29	Sh3pxd2a (ENSDORG00000010430) #30	Stn1 (ENSDORG00000005994) #31	Slk (ENSDORG00000008154) #33	Col17a1 (ENSDORG00000009335) #34	ENSDORG00000028434	ENSDORG00000008943 #36	Cfap43 (ENSDORG00000008947) #37
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT00390000014952	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00390000018550 #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154418.a.a #22
Hedgehog	MODERN SPECIES	4497																INA (ENSEEUG00000014879) #22
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00410000028833	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000163289.b	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00410000028833	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00390000018550 #36
Carnivora	ANCESTRAL SPECIES	16	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.q.a #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Caniformia	ANCESTRAL SPECIES	13	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.q.a #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.r #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Ursidae	ANCESTRAL SPECIES	5	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.r #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000168158	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Ursus	ANCESTRAL SPECIES	7	ENSGT01100000267139	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.r #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000168158	ENSGT00390000018550 #36	ENSGT00530000064714 #37
American black bear	DUPLICATION
American black bear	MODERN SPECIES	1936																ENSUAMG00000028156 #22	ENSUAMG00000028155 #22	ENSUAMG00000028154	PCGF6 (ENSUAMG00000028153) #21
American black bear	MODERN SPECIES	1936															ENSUAMG00000028156 #22	ENSUAMG00000028155 #22	ENSUAMG00000028154	PCGF6 (ENSUAMG00000028153) #21
Polar bear	MODERN SPECIES	92	NFKB2 (ENSUMAG00000023323)	PSD (ENSUMAG00000023417)	CUEDC2 (ENSUMAG00000023434) #7	ENSUMAG00000023438	ACTR1A (ENSUMAG00000023448) #10	SUFU (ENSUMAG00000023464) #11	TRIM8 (ENSUMAG00000023499) #13	ARL3 (ENSUMAG00000023500) #14	SFXN2 (ENSUMAG00000023501) #15	WBP1L (ENSUMAG00000023506) #16	CYP17A1 (ENSUMAG00000023508) #17	BORCS7 (ENSUMAG00000023510) #18	AS3MT (ENSUMAG00000023512)	CNNM2 (ENSUMAG00000023515) #19	ENSUMAG00000023519	ENSUMAG00000023521 #22	ENSUMAG00000023523	ENSUMAG00000023524 #21	TAF5 (ENSUMAG00000023531) #23	ATP5MK (ENSUMAG00000023547) #24	PDCD11 (ENSUMAG00000023567) #25	CALHM2 (ENSUMAG00000023635) #26	CALHM1 (ENSUMAG00000023637) #27	CALHM3 (ENSUMAG00000023638) #28	SH3PXD2A (ENSUMAG00000023643) #30	STN1 (ENSUMAG00000023647) #31	SLK (ENSUMAG00000023651) #33	ENSUMAG00000023654	SFR1 (ENSUMAG00000023655) #36	CFAP43 (ENSUMAG00000023657) #37	GSTO1 (ENSUMAG00000023662)
Giant Panda	MODERN SPECIES	16	NFKB2 (ENSAMEG00000017735)	PSD (ENSAMEG00000017765)	FBXL15 (ENSAMEG00000017780)	CUEDC2 (ENSAMEG00000017783) #7	ENSAMEG00000017791	ACTR1A (ENSAMEG00000017796) #10	SUFU (ENSAMEG00000017809) #11	TRIM8 (ENSAMEG00000017812) #13	ENSAMEG00000017816 #14	SFXN2 (ENSAMEG00000017821) #15	WBP1L (ENSAMEG00000030900) #16	CYP17A1 (ENSAMEG00000017838) #17	BORCS7 (ENSAMEG00000017863) #18	CNNM2 (ENSAMEG00000017864) #19	NT5C2 (ENSAMEG00000017886) #20	INA (ENSAMEG00000023491) #22	PCGF6 (ENSAMEG00000017916) #21	TAF5 (ENSAMEG00000017926) #23	ATP5MK (ENSAMEG00000017934) #24	PDCD11 (ENSAMEG00000017935) #25	CALHM2 (ENSAMEG00000030260) #26	CALHM1 (ENSAMEG00000017956) #27	CALHM3 (ENSAMEG00000017958) #28	NEURL1 (ENSAMEG00000017960) #29	SH3PXD2A (ENSAMEG00000017966) #30	STN1 (ENSAMEG00000017971) #31	SLK (ENSAMEG00000017981) #33	ENSAMEG00000017991	SFR1 (ENSAMEG00000018007) #36	CFAP43 (ENSAMEG00000018011) #37	GSTO1 (ENSAMEG00000018030)
Mustelinae	ANCESTRAL SPECIES	29	ENSGT00940000160250	ENSGT00390000014513.d #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.q.a #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Ferret	MODERN SPECIES	187	PSD (ENSMPUG00000016879)	ENSMPUG00000016874 #7	FBXL15 (ENSMPUG00000016872)	ENSMPUG00000016870	ACTR1A (ENSMPUG00000016868) #10	SUFU (ENSMPUG00000016867) #11	TRIM8 (ENSMPUG00000016866) #13	ARL3 (ENSMPUG00000016864) #14	SFXN2 (ENSMPUG00000016862) #15	WBP1L (ENSMPUG00000016861) #16	CYP17A1 (ENSMPUG00000016860) #17	BORCS7 (ENSMPUG00000016858) #18	AS3MT (ENSMPUG00000016851)	CNNM2 (ENSMPUG00000016848) #19	NT5C2 (ENSMPUG00000016845) #20	INA (ENSMPUG00000016844) #22	PCGF6 (ENSMPUG00000016842) #21	TAF5 (ENSMPUG00000016831) #23	PDCD11 (ENSMPUG00000016829) #25	CALHM2 (ENSMPUG00000016826) #26	CALHM3 (ENSMPUG00000016824) #28	ENSMPUG00000016822	NEURL1 (ENSMPUG00000016821) #29	SH3PXD2A (ENSMPUG00000016820) #30	ENSMPUG00000016805	STN1 (ENSMPUG00000016800) #31	SLK (ENSMPUG00000016799) #33	COL17A1 (ENSMPUG00000016798) #34	ENSMPUG00000016797	SFR1 (ENSMPUG00000016796) #36	CFAP43 (ENSMPUG00000016795) #37
American mink	MODERN SPECIES	25	CUEDC2 (ENSNVIG00000017446) #7	C10orf95 (ENSNVIG00000017436) #9	MFSD13A (ENSNVIG00000017424) #8	ACTR1A (ENSNVIG00000017357) #10	ENSNVIG00000017350	SUFU (ENSNVIG00000017315) #11	TRIM8 (ENSNVIG00000017306) #13	ARL3 (ENSNVIG00000017289) #14	SFXN2 (ENSNVIG00000017262) #15	WBP1L (ENSNVIG00000017241) #16	CYP17A1 (ENSNVIG00000017144) #17	BORCS7 (ENSNVIG00000017120) #18	ENSNVIG00000017111	CNNM2 (ENSNVIG00000017046) #19	NT5C2 (ENSNVIG00000016994) #20	INA (ENSNVIG00000016984) #22	PCGF6 (ENSNVIG00000016935) #21	TAF5 (ENSNVIG00000016891) #23	ENSNVIG00000016873 #24	PDCD11 (ENSNVIG00000016762) #25	CALHM2 (ENSNVIG00000016743) #26	CALHM1 (ENSNVIG00000016736) #27	CALHM3 (ENSNVIG00000016714) #28	NEURL1 (ENSNVIG00000016689) #29	SH3PXD2A (ENSNVIG00000016596) #30	STN1 (ENSNVIG00000016545) #31	SLK (ENSNVIG00000016502) #33	F5H0Q7 (ENSNVIG00000016116) #34	SFR1 (ENSNVIG00000016083) #36	CFAP43 (ENSNVIG00000016002) #37	ENSNVIG00000015962
Canidae	ANCESTRAL SPECIES	16	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369.a #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.q.a.e #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369.a #20	ENSGT00940000160286.m	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.q.a.e #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00550000074855.u.a.a.b	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Dog	MODERN SPECIES	20	PSD (ENSCAFG00845023806)	FBXL15 (ENSCAFG00845024340)	CUEDC2 (ENSCAFG00845024377) #7	C28H10orf95 (ENSCAFG00845024439) #9	MFSD13A (ENSCAFG00845024507) #8	ACTR1A (ENSCAFG00845024750) #10	SUFU (ENSCAFG00845025024) #11	TRIM8 (ENSCAFG00845025148) #13	ARL3 (ENSCAFG00845025280) #14	SFXN2 (ENSCAFG00845025402) #15	WBP1L (ENSCAFG00845025533) #16	CYP17A1 (ENSCAFG00845025701) #17	CNNM2 (ENSCAFG00845025992) #19	NT5C2 (ENSCAFG00845026627) #20	ENSCAFG00845026826	INA (ENSCAFG00845026857) #22	PCGF6 (ENSCAFG00845026968) #21	ENSCAFG00845027176	TAF5 (ENSCAFG00845027221) #23	ATP5MD (ENSCAFG00845027273) #24	PDCD11 (ENSCAFG00845027415) #25	CALHM1 (ENSCAFG00845027760) #27	CALHM3 (ENSCAFG00845027790) #28	NEURL1 (ENSCAFG00845027843) #29	STN1 (ENSCAFG00845027985) #30	STN1 (ENSCAFG00845028219) #31	ENSCAFG00845028290	SLK (ENSCAFG00845028335) #33	COL17A1 (ENSCAFG00845028642) #34	SFR1 (ENSCAFG00845029223) #36	CFAP43 (ENSCAFG00845029264) #37
Dingo	MODERN SPECIES	165	FBXL15 (ENSCAFG00020010220)	CUEDC2 (ENSCAFG00020010222) #7	MFSD13A (ENSCAFG00020010240) #8	ACTR1A (ENSCAFG00020010244) #10	SUFU (ENSCAFG00020010246) #11	TRIM8 (ENSCAFG00020010248) #13	ARL3 (ENSCAFG00020010250) #14	SFXN2 (ENSCAFG00020010254) #15	WBP1L (ENSCAFG00020010258) #16	CYP17A1 (ENSCAFG00020010261) #17	BORCS7 (ENSCAFG00020010264) #18	AS3MT (ENSCAFG00020010265)	CNNM2 (ENSCAFG00020010267) #19	NT5C2 (ENSCAFG00020010290) #20	ENSCAFG00020010320	INA (ENSCAFG00020010321) #22	ENSCAFG00020010324 #21	ENSCAFG00020010327	TAF5 (ENSCAFG00020010331) #23	ENSCAFG00020010350 #24	PDCD11 (ENSCAFG00020010369) #25	CALHM2 (ENSCAFG00020010612) #26	CALHM1 (ENSCAFG00020010614) #27	CALHM3 (ENSCAFG00020010618) #28	NEURL1 (ENSCAFG00020010626) #29	SH3PXD2A (ENSCAFG00020010641) #30	STN1 (ENSCAFG00020010650) #31	ENSCAFG00020010654	SLK (ENSCAFG00020010676) #33	COL17A1 (ENSCAFG00020011291) #34	SFR1 (ENSCAFG00020011405) #36
Red fox	MODERN SPECIES		FBXL15 (ENSVVUG00000003576)	CUEDC2 (ENSVVUG00000003580) #7	MFSD13A (ENSVVUG00000003606) #8	ACTR1A (ENSVVUG00000003644) #10	SUFU (ENSVVUG00000004206) #11	TRIM8 (ENSVVUG00000004218) #13	ARL3 (ENSVVUG00000004222) #14	SFXN2 (ENSVVUG00000004226) #15	WBP1L (ENSVVUG00000004241) #16	CYP17A1 (ENSVVUG00000004262) #17	BORCS7 (ENSVVUG00000004302) #18	AS3MT (ENSVVUG00000004307)	CNNM2 (ENSVVUG00000004323) #19	NT5C2 (ENSVVUG00000004366) #20	ENSVVUG00000004383	INA (ENSVVUG00000004387) #22	PCGF6 (ENSVVUG00000004391) #21	TAF5 (ENSVVUG00000004406) #23	ATP5MD (ENSVVUG00000004442) #24	PDCD11 (ENSVVUG00000004457) #25	CALHM2 (ENSVVUG00000004502) #26	CALHM1 (ENSVVUG00000004508) #27	CALHM3 (ENSVVUG00000004548) #28	NEURL1 (ENSVVUG00000004550) #29	SH3PXD2A (ENSVVUG00000004587) #30	ENSVVUG00000004636 #31	SLK (ENSVVUG00000004650) #33	COL17A1 (ENSVVUG00000004707) #34	SFR1 (ENSVVUG00000004758) #36	CFAP43 (ENSVVUG00000004764) #37	ENSVVUG00000004792
Felidae	ANCESTRAL SPECIES	14	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00980000200805	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.q.a.a.a #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Panthera	ANCESTRAL SPECIES	8	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00930000152835	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.q.a.a.a #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Tiger	MODERN SPECIES	136	MFSD13A (ENSPTIG00000018951) #8	ACTR1A (ENSPTIG00000019111) #10	SUFU (ENSPTIG00000019963) #11	ENSPTIG00000020388	TRIM8 (ENSPTIG00000020475) #13	ENSPTIG00000005748	ARL3 (ENSPTIG00000021020) #14	SFXN2 (ENSPTIG00000000655) #15	WBP1L (ENSPTIG00000002920) #16	CYP17A1 (ENSPTIG00000004247) #17	BORCS7 (ENSPTIG00000005646) #18	AS3MT (ENSPTIG00000005929)	CNNM2 (ENSPTIG00000007177) #19	NT5C2 (ENSPTIG00000008167) #20	ENSPTIG00000009780	INA (ENSPTIG00000009953) #22	ENSPTIG00000010232 #21	TAF5 (ENSPTIG00000010430) #23	ENSPTIG00000010699 #24	PDCD11 (ENSPTIG00000011433) #25	CALHM2 (ENSPTIG00000011982) #26	CALHM1 (ENSPTIG00000012221) #27	CALHM3 (ENSPTIG00000012273) #28
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00930000152835	ENSGT00940000157919 #13	ENSGT00910000147323	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.q.a.a.a #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT01000000222030
leopard	MODERN SPECIES	33	MFSD13A (ENSPPRG00000011829) #8	ACTR1A (ENSPPRG00000011443) #10	SUFU (ENSPPRG00000010512) #11	ENSPPRG00000009259	TRIM8 (ENSPPRG00000008416) #13	ARL3 (ENSPPRG00000007715) #14	SFXN2 (ENSPPRG00000007450) #15	WBP1L (ENSPPRG00000007200) #16	CYP17A1 (ENSPPRG00000006800) #17	BORCS7 (ENSPPRG00000005710) #18	AS3MT (ENSPPRG00000004722)	CNNM2 (ENSPPRG00000003743) #19	NT5C2 (ENSPPRG00000002954) #20	ENSPPRG00000002375	ENSPPRG00000000418	INA (ENSPPRG00000000231) #22	PCGF6 (ENSPPRG00000021382) #21	TAF5 (ENSPPRG00000019671) #23	ENSPPRG00000017518 #24	PDCD11 (ENSPPRG00000015133) #25	CALHM2 (ENSPPRG00000012922) #26	CALHM1 (ENSPPRG00000011899) #27	CALHM3 (ENSPPRG00000011663) #28	NEURL1 (ENSPPRG00000011450) #29	SH3PXD2A (ENSPPRG00000011103) #30	STN1 (ENSPPRG00000010476) #31	SLK (ENSPPRG00000009662) #33	COL17A1 (ENSPPRG00000009059) #34	SFR1 (ENSPPRG00000000336) #36	CFAP43 (ENSPPRG00000023238) #37	ENSPPRG00000024492
lion	MODERN SPECIES	11	CUEDC2 (ENSPLOG00000017803) #7	C10orf95 (ENSPLOG00000017781) #9	MFSD13A (ENSPLOG00000017752) #8	ACTR1A (ENSPLOG00000017687) #10	SUFU (ENSPLOG00000017511) #11	TRIM8 (ENSPLOG00000017378) #13	ENSPLOG00000017352	ARL3 (ENSPLOG00000017326) #14	SFXN2 (ENSPLOG00000017272) #15	WBP1L (ENSPLOG00000017200) #16	CYP17A1 (ENSPLOG00000016900) #17	BORCS7 (ENSPLOG00000016773) #18	AS3MT (ENSPLOG00000016616)	CNNM2 (ENSPLOG00000016463) #19	NT5C2 (ENSPLOG00000016374) #20	INA (ENSPLOG00000016317) #22	PCGF6 (ENSPLOG00000016170) #21	TAF5 (ENSPLOG00000016129) #23	ENSPLOG00000016095 #24	PDCD11 (ENSPLOG00000015561) #25	CALHM2 (ENSPLOG00000015425) #26	CALHM1 (ENSPLOG00000015393) #27	CALHM3 (ENSPLOG00000015347) #28	NEURL1 (ENSPLOG00000015278) #29	SH3PXD2A (ENSPLOG00000014989) #30	STN1 (ENSPLOG00000014905) #31	SLK (ENSPLOG00000014691) #33	COL17A1 (ENSPLOG00000013594) #34	ENSPLOG00000013422 #36	CFAP43 (ENSPLOG00000012959) #37	ENSPLOG00000012892
Cat	MODERN SPECIES	242	FBXL15 (ENSFCAG00000001244)	CUEDC2 (ENSFCAG00000001245) #7	CD2H10orf95 (ENSFCAG00000042728) #9	MFSD13A (ENSFCAG00000023881) #8	ACTR1A (ENSFCAG00000001248) #10	SUFU (ENSFCAG00000001249) #11	TRIM8 (ENSFCAG00000028572) #13	ARL3 (ENSFCAG00000001251) #14	WBP1L (ENSFCAG00000042551) #16	CYP17A1 (ENSFCAG00000001254) #17	ENSFCAG00000041677	AS3MT (ENSFCAG00000030999)	CNNM2 (ENSFCAG00000022183) #19	NT5C2 (ENSFCAG00000013705) #20	ENSFCAG00000037878	INA (ENSFCAG00000025885) #22	PCGF6 (ENSFCAG00000026427) #21	TAF5 (ENSFCAG00000002382) #23	ENSFCAG00000002383 #24	PDCD11 (ENSFCAG00000002384) #25	CALHM2 (ENSFCAG00000002386) #26	CALHM1 (ENSFCAG00000002387) #27	CALHM3 (ENSFCAG00000002388) #28	NEURL1 (ENSFCAG00000026091) #29	SH3PXD2A (ENSFCAG00000002390) #30	STN1 (ENSFCAG00000030378) #31	SLK (ENSFCAG00000004298) #33	COL17A1 (ENSFCAG00000004299) #34	SFR1 (ENSFCAG00000028988) #36	CFAP43 (ENSFCAG00000011533) #37	ENSFCAG00000041951
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00410000028833	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00390000018550 #36
Equus	ANCESTRAL SPECIES	9	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Donkey	MODERN SPECIES	11	CUEDC2 (ENSEASG00005015234) #7	C10orf95 (ENSEASG00005034483) #9	MFSD13A (ENSEASG00005015228) #8	ACTR1A (ENSEASG00005015221) #10	SUFU (ENSEASG00005015216) #11	TRIM8 (ENSEASG00005015212) #13	ARL3 (ENSEASG00005037451) #14	SFXN2 (ENSEASG00005015206) #15	WBP1L (ENSEASG00005015198) #16	CYP17A1 (ENSEASG00005015197) #17	ENSEASG00005035755	BORCS7 (ENSEASG00005032646) #18	AS3MT (ENSEASG00005015193)	CNNM2 (ENSEASG00005015189) #19	NT5C2 (ENSEASG00005015183) #20	INA (ENSEASG00005015178) #22	PCGF6 (ENSEASG00005015173) #21	TAF5 (ENSEASG00005034630) #23	ENSEASG00005015170 #24	PDCD11 (ENSEASG00005015159) #25	ENSEASG00005027410 #26	ENSEASG00005015151 #27	ENSEASG00005034926 #26	ENSEASG00005028407 #27	CALHM3 (ENSEASG00005031203) #28	NEURL1 (ENSEASG00005015146) #29	SH3PXD2A (ENSEASG00005015136) #30	STN1 (ENSEASG00005015134) #31	SLK (ENSEASG00005015130) #33	COL17A1 (ENSEASG00005015077) #34	ENSEASG00005038642
Horse	MODERN SPECIES		GBF1 (ENSECAG00000023593)	NFKB2 (ENSECAG00000019593)	FBXL15 (ENSECAG00000000576)	PSD (ENSECAG00000007172)	MFSD13A (ENSECAG00000014757) #8	ACTR1A (ENSECAG00000024503) #10	SUFU (ENSECAG00000019583) #11	TRIM8 (ENSECAG00000016770) #13	ARL3 (ENSECAG00000000300) #14	SFXN2 (ENSECAG00000024231) #15	WBP1L (ENSECAG00000024142) #16	CYP17A1 (ENSECAG00000010022) #17	ENSECAG00000047543 #18	AS3MT (ENSECAG00000018722)	CNNM2 (ENSECAG00000018159) #19	INA (ENSECAG00000032667) #22	NT5C2 (ENSECAG00000022574) #20	PCGF6 (ENSECAG00000017183) #21	TAF5 (ENSECAG00000005853) #23	ENSECAG00000028196 #24	PDCD11 (ENSECAG00000020507) #25	CALHM2 (ENSECAG00000020495) #26	CALHM1 (ENSECAG00000020482) #27	CALHM3 (ENSECAG00000019882) #28	NEURL1 (ENSECAG00000012870) #29	SH3PXD2A (ENSECAG00000009545) #30	STN1 (ENSECAG00000023477) #31	SLK (ENSECAG00000010212) #33	COL17A1 (ENSECAG00000007909) #34	SFR1 (ENSECAG00000005386) #36	GSTO1 (ENSECAG00000011560)
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00410000028833	ENSGT00390000015849 #18	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Greater horseshoe bat	MODERN SPECIES	7	CUEDC2 (ENSRFEG00010017742) #7	C10orf95 (ENSRFEG00010017725) #9	MFSD13A (ENSRFEG00010017701) #8	ACTR1A (ENSRFEG00010017647) #10	SUFU (ENSRFEG00010017585) #11	TRIM8 (ENSRFEG00010017419) #13	ARL3 (ENSRFEG00010017354) #14	SFXN2 (ENSRFEG00010017301) #15	WBP1L (ENSRFEG00010017206) #16	ENSRFEG00010017152	CYP17A1 (ENSRFEG00010016955) #17	BORCS7 (ENSRFEG00010016916) #18	CNNM2 (ENSRFEG00010016866) #19	NT5C2 (ENSRFEG00010016737) #20	ENSRFEG00010016714	INA (ENSRFEG00010016674) #22	ENSRFEG00010016624	PCGF6 (ENSRFEG00010016536) #21	TAF5 (ENSRFEG00010016357) #23	ENSRFEG00010016305 #24	PDCD11 (ENSRFEG00010016231) #25	CALHM2 (ENSRFEG00010016197) #26	CALHM1 (ENSRFEG00010016159) #27	CALHM3 (ENSRFEG00010016094) #28	NEURL1 (ENSRFEG00010016052) #29	SH3PXD2A (ENSRFEG00010015976) #30	STN1 (ENSRFEG00010015891) #31	SLK (ENSRFEG00010015762) #33	COL17A1 (ENSRFEG00010015674) #34	SFR1 (ENSRFEG00010015584) #36	CFAP43 (ENSRFEG00010015507) #37
Microbat	MODERN SPECIES	1099	PSD (ENSMLUG00000006298)	FBXL15 (ENSMLUG00000006312)	CUEDC2 (ENSMLUG00000006328) #7	MFSD13A (ENSMLUG00000006346) #8	ACTR1A (ENSMLUG00000006356) #10	SUFU (ENSMLUG00000012590) #11	TRIM8 (ENSMLUG00000012594) #13	ARL3 (ENSMLUG00000012603) #14	SFXN2 (ENSMLUG00000012611) #15	ENSMLUG00000012620 #16	CYP17A1 (ENSMLUG00000004363) #17	BORCS7 (ENSMLUG00000024332) #18	CNNM2 (ENSMLUG00000023959) #19	ENSMLUG00000030173	ENSMLUG00000004962	INA (ENSMLUG00000004978) #22	PCGF6 (ENSMLUG00000004985) #21	TAF5 (ENSMLUG00000022791) #23	PDCD11 (ENSMLUG00000004997) #25	CALHM1 (ENSMLUG00000005022) #27	CALHM3 (ENSMLUG00000013177) #28	NEURL1 (ENSMLUG00000013182) #29	SH3PXD2A (ENSMLUG00000013186) #30	STN1 (ENSMLUG00000002037) #31	SLK (ENSMLUG00000013319) #33	COL17A1 (ENSMLUG00000013328) #34	SFR1 (ENSMLUG00000013352) #36	ENSMLUG00000023358 #37	ENSMLUG00000013359 #37	GSTO1 (ENSMLUG00000013385)	GSTO2 (ENSMLUG00000025624)
Megabat	MODERN SPECIES	1281																INA (ENSPVAG00000004168) #22	PCGF6 (ENSPVAG00000004169) #21	TAF5 (ENSPVAG00000004172) #23	ATP5MK (ENSPVAG00000004175) #24	PDCD11 (ENSPVAG00000004176) #25	CALHM2 (ENSPVAG00000004181) #26	CALHM1 (ENSPVAG00000004182) #27	CALHM3 (ENSPVAG00000004183) #28	NEURL1 (ENSPVAG00000004185) #29	SH3PXD2A (ENSPVAG00000004186) #30	STN1 (ENSPVAG00000004187) #31	SLK (ENSPVAG00000004188) #33	COL17A1 (ENSPVAG00000004189) #34	SFR1 (ENSPVAG00000004202) #36	CFAP43 (ENSPVAG00000004205) #37	GSTO1 (ENSPVAG00000004209)
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00410000028833	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000163289.b	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36
Suina	ANCESTRAL SPECIES	6	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Pig	MODERN SPECIES	5	CUEDC2 (ENSSSCG00000033359) #7	MFSD13A (ENSSSCG00000010584) #8	ACTR1A (ENSSSCG00000010585) #10	SUFU (ENSSSCG00000010586) #11	ENSSSCG00000037500	ENSSSCG00000041413	TRIM8 (ENSSSCG00000038856) #13	ARL3 (ENSSSCG00000031782) #14	SFXN2 (ENSSSCG00000010589) #15	WBP1L (ENSSSCG00000029594) #16	CYP17A1 (ENSSSCG00000010591) #17	BORCS7 (ENSSSCG00000038633) #18	AS3MT (ENSSSCG00000010592)	CNNM2 (ENSSSCG00000010593) #19	NT5C2 (ENSSSCG00000010594) #20	INA (ENSSSCG00000010595) #22	PCGF6 (ENSSSCG00000020954) #21	TAF5 (ENSSSCG00000010597) #23	ATP5MK (ENSSSCG00000032165) #24	PDCD11 (ENSSSCG00000010599) #25	CALHM2 (ENSSSCG00000010600) #26	CALHM1 (ENSSSCG00000010601) #27	CALHM3 (ENSSSCG00000034671) #28	NEURL1 (ENSSSCG00000010603) #29	SH3PXD2A (ENSSSCG00000010604) #30	STN1 (ENSSSCG00000010605) #31	SLK (ENSSSCG00000010606) #33	COL17A1 (ENSSSCG00000010607) #34	SFR1 (ENSSSCG00000010608) #36	CFAP43 (ENSSSCG00000010609) #37	ENSSSCG00000010610
Chacoan peccary	MODERN SPECIES	955	CUEDC2 (ENSCWAG00000013653) #7	C10orf95 (ENSCWAG00000013611) #9	MFSD13A (ENSCWAG00000013539) #8	ACTR1A (ENSCWAG00000013459) #10	SUFU (ENSCWAG00000013266) #11	TRIM8 (ENSCWAG00000013236) #13	ARL3 (ENSCWAG00000013159) #14	ENSCWAG00000013109 #15	WBP1L (ENSCWAG00000013043) #16	CYP17A1 (ENSCWAG00000012610) #17	ENSCWAG00000012570	BORCS7 (ENSCWAG00000012528) #18	AS3MT (ENSCWAG00000012429)	CNNM2 (ENSCWAG00000012366) #19	NT5C2 (ENSCWAG00000012289) #20	INA (ENSCWAG00000012252) #22	PCGF6 (ENSCWAG00000012211) #21	TAF5 (ENSCWAG00000012095) #23	ATP5MK (ENSCWAG00000012035) #24	PDCD11 (ENSCWAG00000011961) #25	CALHM2 (ENSCWAG00000011925) #26	CALHM1 (ENSCWAG00000011899) #27	CALHM3 (ENSCWAG00000011859) #28	NEURL1 (ENSCWAG00000011779) #29	SH3PXD2A (ENSCWAG00000011699) #30	STN1 (ENSCWAG00000011621) #31	SLK (ENSCWAG00000011479) #33	COL17A1 (ENSCWAG00000010502) #34	SFR1 (ENSCWAG00000010419) #36	CFAP43 (ENSCWAG00000021831) #37	GSTO1 (ENSCWAG00000021817)
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00410000028833	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000163289.b	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36
Camelidae	ANCESTRAL SPECIES	4	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Arabian camel	MODERN SPECIES	2	FBXL15 (ENSCDRG00005014048)	CUEDC2 (ENSCDRG00005013933) #7	C10orf95 (ENSCDRG00005013904) #9	MFSD13A (ENSCDRG00005013849) #8	ACTR1A (ENSCDRG00005013729) #10	SUFU (ENSCDRG00005013614) #11	TRIM8 (ENSCDRG00005013435) #13	ARL3 (ENSCDRG00005013316) #14	SFXN2 (ENSCDRG00005013237) #15	WBP1L (ENSCDRG00005013170) #16	CYP17A1 (ENSCDRG00005013042) #17	BORCS7 (ENSCDRG00005013001) #18	AS3MT (ENSCDRG00005012899)	CNNM2 (ENSCDRG00005012708) #19	NT5C2 (ENSCDRG00005012355) #20	INA (ENSCDRG00005012311) #22	PCGF6 (ENSCDRG00005012063) #21	TAF5 (ENSCDRG00005011985) #23	ENSCDRG00005011960 #24	PDCD11 (ENSCDRG00005011201) #25	CALHM2 (ENSCDRG00005011123) #26	CALHM1 (ENSCDRG00005011070) #27	CALHM3 (ENSCDRG00005011030) #28	NEURL1 (ENSCDRG00005010923) #29	SH3PXD2A (ENSCDRG00005010700) #30	STN1 (ENSCDRG00005010608) #31	SLK (ENSCDRG00005010331) #33	COL17A1 (ENSCDRG00005008684) #34	SFR1 (ENSCDRG00005008585) #36	CFAP43 (ENSCDRG00005008504) #37	GSTO1 (ENSCDRG00005008349)
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00410000028833	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Cetacea	ANCESTRAL SPECIES	15	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a.m #16	ENSGT00940000155588.b #17	ENSGT00410000028833	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a.m #16	ENSGT00940000155588.b #17	ENSGT00410000028833	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00950000186454	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a.m.a #16	ENSGT00940000155588.b #17	ENSGT00410000028833	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Dolphin	MODERN SPECIES	985																INA (ENSTTRG00000003328) #22	PCGF6 (ENSTTRG00000003333) #21	TAF5 (ENSTTRG00000003344) #23	USMG5 (ENSTTRG00000003352) #24	PDCD11 (ENSTTRG00000003356) #25	CALHM2 (ENSTTRG00000003364) #26	CALHM1 (ENSTTRG00000003368) #27	CALHM3 (ENSTTRG00000003370) #28	NEURL1 (ENSTTRG00000003372) #29	SH3PXD2A (ENSTTRG00000003374) #30	STN1 (ENSTTRG00000003375) #31
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a.m.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00910000145900 #9	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a.m.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Narwhal	MODERN SPECIES	311	CUEDC2 (ENSMMNG00015013134) #7	C10orf95 (ENSMMNG00015013148) #9	MFSD13A (ENSMMNG00015013161) #8	ACTR1A (ENSMMNG00015013180) #10	SUFU (ENSMMNG00015013204) #11	TRIM8 (ENSMMNG00015013233) #13	ARL3 (ENSMMNG00015013259) #14	SFXN2 (ENSMMNG00015013273) #15	ENSMMNG00015013292 #16	CYP17A1 (ENSMMNG00015013335) #17	ENSMMNG00015013382	BORCS7 (ENSMMNG00015013396) #18	AS3MT (ENSMMNG00015013420)	CNNM2 (ENSMMNG00015013452) #19	ENSMMNG00015013465	INA (ENSMMNG00015013479) #22	PCGF6 (ENSMMNG00015013501) #21	TAF5 (ENSMMNG00015013528) #23	ATP5MK (ENSMMNG00015013543) #24	PDCD11 (ENSMMNG00015013562) #25	CALHM2 (ENSMMNG00015013608) #26	CALHM1 (ENSMMNG00015013618) #27	CALHM3 (ENSMMNG00015013638) #28	NEURL1 (ENSMMNG00015013659) #29	SH3PXD2A (ENSMMNG00015013681) #30	STN1 (ENSMMNG00015013736) #31	SLK (ENSMMNG00015013837) #33	COL17A1 (ENSMMNG00015013979) #34	SFR1 (ENSMMNG00015014153) #36	CFAP43 (ENSMMNG00015014169) #37	GSTO1 (ENSMMNG00015014192)
Beluga whale	MODERN SPECIES	65	NFKB2 (ENSDLEG00000010672)	PSD (ENSDLEG00000010100)	FBXL15 (ENSDLEG00000010029)	CUEDC2 (ENSDLEG00000010002) #7	MFSD13A (ENSDLEG00000009947) #8	ACTR1A (ENSDLEG00000009891) #10	SUFU (ENSDLEG00000009757) #11	TRIM8 (ENSDLEG00000009697) #13	ARL3 (ENSDLEG00000009629) #14	SFXN2 (ENSDLEG00000009564) #15	CYP17A1 (ENSDLEG00000009531) #17	BORCS7 (ENSDLEG00000009520) #18	AS3MT (ENSDLEG00000009479)	CNNM2 (ENSDLEG00000009405) #19	NT5C2 (ENSDLEG00000009371)	INA (ENSDLEG00000009353) #22	PCGF6 (ENSDLEG00000009308) #21	TAF5 (ENSDLEG00000009272) #23	USMG5 (ENSDLEG00000009255) #24	PDCD11 (ENSDLEG00000009147) #25	CALHM2 (ENSDLEG00000009041) #26	CALHM1 (ENSDLEG00000009015) #27	CALHM3 (ENSDLEG00000008972) #28	NEURL1 (ENSDLEG00000008927) #29	SH3PXD2A (ENSDLEG00000008838) #30	STN1 (ENSDLEG00000013196) #31	SLK (ENSDLEG00000013132) #33	COL17A1 (ENSDLEG00000012764) #34	SFR1 (ENSDLEG00000012724) #36	CFAP43 (ENSDLEG00000012588) #37	GSTO1 (ENSDLEG00000012569)
Vaquita	MODERN SPECIES	7	CUEDC2 (ENSPSNG00000017566) #7	MFSD13A (ENSPSNG00000017652) #8	ACTR1A (ENSPSNG00000017727) #10	SUFU (ENSPSNG00000017847) #11	TRIM8 (ENSPSNG00000017907) #13	ENSPSNG00000017958	ARL3 (ENSPSNG00000017986) #14	SFXN2 (ENSPSNG00000018035) #15	ENSPSNG00000018106 #16	CYP17A1 (ENSPSNG00000018242) #17	ENSPSNG00000018533	BORCS7 (ENSPSNG00000018573) #18	AS3MT (ENSPSNG00000018610)	CNNM2 (ENSPSNG00000018654) #19	NT5C2 (ENSPSNG00000018760) #20	INA (ENSPSNG00000018790) #22	PCGF6 (ENSPSNG00000018827) #21	TAF5 (ENSPSNG00000018939) #23	ENSPSNG00000018977 #24	PDCD11 (ENSPSNG00000019025) #25	CALHM2 (ENSPSNG00000019092) #26	CALHM1 (ENSPSNG00000019125) #27	CALHM3 (ENSPSNG00000019156) #28	NEURL1 (ENSPSNG00000019212) #29	SH3PXD2A (ENSPSNG00000019335) #30	STN1 (ENSPSNG00000019572) #31	SLK (ENSPSNG00000019646) #33	COL17A1 (ENSPSNG00000019777) #34	SFR1 (ENSPSNG00000019848) #36	CFAP43 (ENSPSNG00000019933) #37	GSTO1 (ENSPSNG00000020286)
Sperm whale	MODERN SPECIES	12	ENSPCTG00005019221	ACTR1A (ENSPCTG00005019239) #10	MFSD13A (ENSPCTG00005019320) #8	CUEDC2 (ENSPCTG00005019392) #7	FBXL15 (ENSPCTG00005019435)	PSD (ENSPCTG00005019477)	NFKB2 (ENSPCTG00005019685)	GBF1 (ENSPCTG00005019758)	ARL3 (ENSPCTG00005020073) #14	WBP1L (ENSPCTG00005020108) #16	CYP17A1 (ENSPCTG00005020262) #17	BORCS7 (ENSPCTG00005020478) #18	AS3MT (ENSPCTG00005020508)	CNNM2 (ENSPCTG00005020562) #19	NT5C2 (ENSPCTG00005020690) #20	INA (ENSPCTG00005020759) #22	ENSPCTG00005020775	PCGF6 (ENSPCTG00005020785) #21	TAF5 (ENSPCTG00005020833) #23	ATP5MD (ENSPCTG00005020847) #24	PDCD11 (ENSPCTG00005020873) #25	CALHM2 (ENSPCTG00005020892) #26	CALHM3 (ENSPCTG00005020902) #28	NEURL1 (ENSPCTG00005020933) #29	SH3PXD2A (ENSPCTG00005020967) #30	STN1 (ENSPCTG00005021023) #31	SLK (ENSPCTG00005021059) #33	ENSPCTG00005021112	ENSPCTG00005021155 #36	CFAP43 (ENSPCTG00005021187) #37	GSTO1 (ENSPCTG00005021211)
Blue whale	MODERN SPECIES	7	PSD (ENSBMSG00010015899)	FBXL15 (ENSBMSG00010015838)	CUEDC2 (ENSBMSG00010015781) #7	MFSD13A (ENSBMSG00010015734) #8	ACTR1A (ENSBMSG00010015668) #10	SUFU (ENSBMSG00010015610) #11	TRIM8 (ENSBMSG00010015579) #13	ARL3 (ENSBMSG00010015549) #14	SFXN2 (ENSBMSG00010015478) #15	ENSBMSG00010015401 #16	CYP17A1 (ENSBMSG00010015084) #17	BORCS7 (ENSBMSG00010015015) #18	AS3MT (ENSBMSG00010014924)	CNNM2 (ENSBMSG00010014766) #19	NT5C2 (ENSBMSG00010014532) #20	INA (ENSBMSG00010014285) #22	PCGF6 (ENSBMSG00010014174) #21	TAF5 (ENSBMSG00010014107) #23	ENSBMSG00010014054 #24	PDCD11 (ENSBMSG00010013983) #25	CALHM2 (ENSBMSG00010013933) #26	CALHM1 (ENSBMSG00010021743) #27	NEURL1 (ENSBMSG00010021740) #29	SH3PXD2A (ENSBMSG00010021733) #30	STN1 (ENSBMSG00010021725) #31	SLK (ENSBMSG00010021709) #33	ENSBMSG00010021698	SFR1 (ENSBMSG00010021686) #36	CFAP43 (ENSBMSG00010021676) #37	GSTO1 (ENSBMSG00010021655)	GSTO2 (ENSBMSG00010021631)
Pecora	ANCESTRAL SPECIES	12	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.h.b #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351.t
Percora_a	ANCESTRAL SPECIES	14	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a.p #16	ENSGT00950000183109.c.a.a.o #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.h.b #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351.t
Bovidae	ANCESTRAL SPECIES	24	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a.o #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.h.b.b #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351.t
Bovinae	ANCESTRAL SPECIES	22	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a.o #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163315	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.h.b.b #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351.t
Bos	ANCESTRAL SPECIES	23	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.a.a.a.a.a	ENSGT00950000183109.c.a.a.o #16	ENSGT00940000155588.b.o #17	ENSGT00940000155588.b.p #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163315	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.h.b.a.a #24	ENSGT00390000015489.h.b.b #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732.b #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Bos_a	ANCESTRAL SPECIES	17	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.a.a.a.a.a	ENSGT00950000183109.c.a.a.o #16	ENSGT00940000155588.b.o #17	ENSGT00940000155588.b.p #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163315	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.h.b.a.a #24	ENSGT00390000015489.h.b.b #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732.b #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Wild yak	MODERN SPECIES	124	CUEDC2 (ENSBMUG00000001561) #7	MFSD13A (ENSBMUG00000001534) #8	ACTR1A (ENSBMUG00000001516) #10	SUFU (ENSBMUG00000001474) #11	TRIM8 (ENSBMUG00000001457) #13	ARL3 (ENSBMUG00000001439) #14	SFXN2 (ENSBMUG00000001395) #15	WBP1L (ENSBMUG00000001345) #16	ENSBMUG00000001320 #17	ENSBMUG00000001210 #17	BORCS7 (ENSBMUG00000001161) #18	AS3MT (ENSBMUG00000001150)	CNNM2 (ENSBMUG00000001127) #19	ENSBMUG00000001099	NT5C2 (ENSBMUG00000001069) #20	INA (ENSBMUG00000001016) #22	PCGF6 (ENSBMUG00000000995) #21	TAF5 (ENSBMUG00000000970) #23	ENSBMUG00000000948 #24	PDCD11 (ENSBMUG00000000897) #25	CALHM2 (ENSBMUG00000000810) #26	CALHM1 (ENSBMUG00000000792) #27	CALHM3 (ENSBMUG00000000783) #28	NEURL1 (ENSBMUG00000000765) #29	SH3PXD2A (ENSBMUG00000000732) #30	STN1 (ENSBMUG00000000696) #31
Domestic yak	MODERN SPECIES	17	ACTR1A (ENSBGRG00000006965) #10	SUFU (ENSBGRG00000007124) #11	TRIM8 (ENSBGRG00000007476) #13	ARL3 (ENSBGRG00000007507) #14	SFXN2 (ENSBGRG00000007566) #15	ENSBGRG00000007674	WBP1L (ENSBGRG00000007712) #16	ENSBGRG00000007921 #17	ENSBGRG00000008360 #17	ENSBGRG00000008565 #17	BORCS7 (ENSBGRG00000008664) #18	AS3MT (ENSBGRG00000008703)	CNNM2 (ENSBGRG00000008807) #19	NT5C2 (ENSBGRG00000008985) #20	ENSBGRG00000009166	INA (ENSBGRG00000009201) #22	PCGF6 (ENSBGRG00000009240) #21	TAF5 (ENSBGRG00000009421) #23	ENSBGRG00000009527 #24	ENSBGRG00000009559 #24	PDCD11 (ENSBGRG00000009626) #25	CALHM2 (ENSBGRG00000009752) #26	CALHM1 (ENSBGRG00000009787) #27	CALHM3 (ENSBGRG00000009815) #28	NEURL1 (ENSBGRG00000009848) #29	SH3PXD2A (ENSBGRG00000009950) #30	STN1 (ENSBGRG00000010099) #31	SLK (ENSBGRG00000010186) #33	COL17A1 (ENSBGRG00000010903) #34	SFR1 (ENSBGRG00000012483) #36	ENSBGRG00000012536 #37
Bos_b	ANCESTRAL SPECIES	23	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.a.a.a.a.a	ENSGT00950000183109.c.a.a.o #16	ENSGT00940000155588.b.o #17	ENSGT00940000155588.b.p #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.h.b.a.a #24	ENSGT00390000015489.h.b.a.b #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732.b #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Cow	MODERN SPECIES	18	SUFU (ENSBTAG00000021068) #11	TRIM8 (ENSBTAG00000021071) #13	ARL3 (ENSBTAG00000004318) #14	SFXN2 (ENSBTAG00000004321) #15	ENSBTAG00000050509	WBP1L (ENSBTAG00000014336) #16	CYP17A1 (ENSBTAG00000049558) #17	ENSBTAG00000054516 #17	CYP17A1 (ENSBTAG00000014335) #17	ENSBTAG00000053826 #18	AS3MT (ENSBTAG00000036127)	ENSBTAG00000053360	ENSBTAG00000054629	CNNM2 (ENSBTAG00000012857) #19	NT5C2 (ENSBTAG00000012858) #20	INA (ENSBTAG00000002717) #22	PCGF6 (ENSBTAG00000009879) #21	TAF5 (ENSBTAG00000009709) #23	ATP5MK (ENSBTAG00000009713) #24	PDCD11 (ENSBTAG00000009715) #25	CALHM2 (ENSBTAG00000009719) #26	CALHM1 (ENSBTAG00000007044) #27	CALHM3 (ENSBTAG00000032761) #28	NEURL1 (ENSBTAG00000003741) #29	SH3PXD2A (ENSBTAG00000044153) #30	ENSBTAG00000048488 #30	STN1 (ENSBTAG00000015019) #31	SLK (ENSBTAG00000001017) #33	COL17A1 (ENSBTAG00000002430) #34	SFR1 (ENSBTAG00000047450) #36	CFAP43 (ENSBTAG00000014574) #37
Hybrid Bos Indicus	MODERN SPECIES	18	ACTR1A (ENSBIXG00005001499) #10	SUFU (ENSBIXG00005013143) #11	TRIM8 (ENSBIXG00005013186) #13	ARL3 (ENSBIXG00005013209) #14	SFXN2 (ENSBIXG00005013232) #15	ENSBIXG00005013254 #16	ENSBIXG00005013390 #17	ENSBIXG00005013421 #17	ENSBIXG00005013433	BORCS7 (ENSBIXG00005013454) #18	AS3MT (ENSBIXG00005013473)	ENSBIXG00005013480	CNNM2 (ENSBIXG00005013565) #19	ENSBIXG00005013582	NT5C2 (ENSBIXG00005013678) #20	INA (ENSBIXG00005013717) #22	PCGF6 (ENSBIXG00005013781) #21	TAF5 (ENSBIXG00005013813) #23	ENSBIXG00005005925 #24	PDCD11 (ENSBIXG00005013880) #25	CALHM2 (ENSBIXG00005013905) #26	CALHM1 (ENSBIXG00005013926) #27	CALHM3 (ENSBIXG00005013942) #28	NEURL1 (ENSBIXG00005007451) #29	SH3PXD2A (ENSBIXG00005007453) #30	STN1 (ENSBIXG00005014161) #31	SLK (ENSBIXG00005014357) #33	COL17A1 (ENSBIXG00005014449) #34	SFR1 (ENSBIXG00005014485) #36	CFAP43 (ENSBIXG00005006740) #37	GSTO1 (ENSBIXG00005002028)
American bison	MODERN SPECIES	3316	FBXL15 (ENSBBBG00000022406)	CUEDC2 (ENSBBBG00000022416) #7	MFSD13A (ENSBBBG00000005916) #8	ACTR1A (ENSBBBG00000022481) #10	SUFU (ENSBBBG00000022501) #11	TRIM8 (ENSBBBG00000022513) #13	ARL3 (ENSBBBG00000022525) #14	SFXN2 (ENSBBBG00000022549) #15	WBP1L (ENSBBBG00000022572) #16	CYP17A1 (ENSBBBG00000022580) #17	BORCS7 (ENSBBBG00000022589) #18	AS3MT (ENSBBBG00000022602)	CNNM2 (ENSBBBG00000005962) #19	ENSBBBG00000022663	NT5C2 (ENSBBBG00000022699) #20	INA (ENSBBBG00000022709) #22	PCGF6 (ENSBBBG00000022739) #21	TAF5 (ENSBBBG00000005985) #23	ENSBBBG00000022765 #24	PDCD11 (ENSBBBG00000022849) #25	CALHM2 (ENSBBBG00000022855) #26	CALHM1 (ENSBBBG00000022866) #27	CALHM3 (ENSBBBG00000022873) #28	NEURL1 (ENSBBBG00000022879) #29	SH3PXD2A (ENSBBBG00000022954) #30	STN1 (ENSBBBG00000023099) #31	SLK (ENSBBBG00000006071) #33	COL17A1 (ENSBBBG00000006107) #34	SFR1 (ENSBBBG00000023370) #36	CFAP43 (ENSBBBG00000023436) #37	ENSBBBG00000023450
Caprinae	ANCESTRAL SPECIES	19	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a.p #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.g.b.b #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351.t
Rambouillet Sheep	MODERN SPECIES	14	CUEDC2 (ENSOARG00020025536) #7	MFSD13A (ENSOARG00020006356) #8	ACTR1A (ENSOARG00020006381) #10	SUFU (ENSOARG00020006428) #11	TRIM8 (ENSOARG00020006668) #13	ARL3 (ENSOARG00020006754) #14	SFXN2 (ENSOARG00020006982) #15	WBP1L (ENSOARG00020007033) #16	ENSOARG00020007122	ENSOARG00020007149 #17	CYP17A1 (ENSOARG00020007273) #17	BORCS7 (ENSOARG00020007581) #18	AS3MT (ENSOARG00020007602)	CNNM2 (ENSOARG00020007642) #19	NT5C2 (ENSOARG00020007751) #20	INA (ENSOARG00020007851) #22	PCGF6 (ENSOARG00020007889) #21	TAF5 (ENSOARG00020008039) #23	ATP5MD (ENSOARG00020008172) #24	PDCD11 (ENSOARG00020008240) #25	CALHM2 (ENSOARG00020008493) #26	CALHM1 (ENSOARG00020008535) #27	CALHM3 (ENSOARG00020008557) #28	NEURL1 (ENSOARG00020008586) #29	SH3PXD2A (ENSOARG00020008650) #30	ENSOARG00020008903	STN1 (ENSOARG00020008923) #31	SLK (ENSOARG00020009006) #33	COL17A1 (ENSOARG00020009409) #34	SFR1 (ENSOARG00020009619) #36	CFAP43 (ENSOARG00020009695) #37
Goat	MODERN SPECIES	18	FBXL15 (ENSCHIG00000017809)	CUEDC2 (ENSCHIG00000010950) #7	MFSD13A (ENSCHIG00000022237) #8	ACTR1A (ENSCHIG00000014540) #10	SUFU (ENSCHIG00000021986) #11	TRIM8 (ENSCHIG00000012123) #13	ARL3 (ENSCHIG00000012000) #14	SFXN2 (ENSCHIG00000005366) #15	WBP1L (ENSCHIG00000016756) #16	CYP17A1B (ENSCHIG00000005308) #17	CYP17A1A (ENSCHIG00000015158) #17	BORCS7 (ENSCHIG00000000549) #18	AS3MT (ENSCHIG00000013994)	CNNM2 (ENSCHIG00000016492) #19	NT5C2 (ENSCHIG00000016169) #20	INA (ENSCHIG00000021339) #22	PCGF6 (ENSCHIG00000011396) #21	TAF5 (ENSCHIG00000011203) #23	ENSCHIG00000003414 #24	PDCD11 (ENSCHIG00000025218) #25	CALHM2 (ENSCHIG00000014672) #26	CALHM1 (ENSCHIG00000000587) #27	CALHM3 (ENSCHIG00000019527) #28	NEURL1 (ENSCHIG00000021908) #29	SH3PXD2A (ENSCHIG00000012501) #30	ENSCHIG00000019425 #31	SLK (ENSCHIG00000017273) #33	COL17A1 (ENSCHIG00000013715) #34	SFR1 (ENSCHIG00000020297) #36	ENSCHIG00000019373	CFAP43 (ENSCHIG00000019392) #37
Siberian musk deer	MODERN SPECIES	1162	FBXL15 (ENSMMSG00000023546)	CUEDC2 (ENSMMSG00000023534) #7	MFSD13A (ENSMMSG00000023523) #8	ACTR1A (ENSMMSG00000023508) #10	SUFU (ENSMMSG00000023494) #11	TRIM8 (ENSMMSG00000023486) #13	ARL3 (ENSMMSG00000023474) #14	SFXN2 (ENSMMSG00000023456) #15	WBP1L (ENSMMSG00000023437) #16	CYP17A1 (ENSMMSG00000023330) #17	BORCS7 (ENSMMSG00000023301) #18	ENSMMSG00000023266	CNNM2 (ENSMMSG00000023218) #19	ENSMMSG00000023210	ENSMMSG00000023189	INA (ENSMMSG00000023173) #22	ENSMMSG00000023151 #21	TAF5 (ENSMMSG00000023138) #23	ENSMMSG00000023134 #24	PDCD11 (ENSMMSG00000023119) #25	CALHM2 (ENSMMSG00000023108) #26	CALHM1 (ENSMMSG00000023103) #27	CALHM3 (ENSMMSG00000023099) #28	NEURL1 (ENSMMSG00000023079) #29	SH3PXD2A (ENSMMSG00000023055) #30	STN1 (ENSMMSG00000023042) #31	SLK (ENSMMSG00000023006) #33	COL17A1 (ENSMMSG00000022824) #34	SFR1 (ENSMMSG00000022773) #36	CFAP43 (ENSMMSG00000022726) #37	GSTO1 (ENSMMSG00000022646)
Yarkand deer	MODERN SPECIES	6	PSD (ENSCHYG00000013510)	FBXL15 (ENSCHYG00000013637)	CUEDC2 (ENSCHYG00000013695) #7	MFSD13A (ENSCHYG00000013882) #8	ACTR1A (ENSCHYG00000014018) #10	SUFU (ENSCHYG00000014200) #11	TRIM8 (ENSCHYG00000014350) #13	ARL3 (ENSCHYG00000014398) #14	SFXN2 (ENSCHYG00000014532) #15	WBP1L (ENSCHYG00000014950) #16	ENSCHYG00000015093	BORCS7 (ENSCHYG00000015118) #18	AS3MT (ENSCHYG00000015224)	CNNM2 (ENSCHYG00000015538) #19	NT5C2 (ENSCHYG00000016134) #20	INA (ENSCHYG00000016625) #22	ENSCHYG00000016674	PCGF6 (ENSCHYG00000005140) #21	TAF5 (ENSCHYG00000005235) #23	ENSCHYG00000005295 #24	PDCD11 (ENSCHYG00000005348) #25	CALHM2 (ENSCHYG00000005405) #26	CALHM1 (ENSCHYG00000005428) #27	CALHM3 (ENSCHYG00000005447) #28	NEURL1 (ENSCHYG00000005486) #29	SH3PXD2A (ENSCHYG00000005529) #30	STN1 (ENSCHYG00000005613) #31	SLK (ENSCHYG00000005694) #33	COL17A1 (ENSCHYG00000005902) #34	SFR1 (ENSCHYG00000006389) #36	CFAP43 (ENSCHYG00000006430) #37
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT00390000014952	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Xenarthra	ANCESTRAL SPECIES	61	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30
Armadillo	MODERN SPECIES	3168														ENSDNOG00000000149 #19	NT5C2 (ENSDNOG00000000151) #20	INA (ENSDNOG00000002852) #22	PCGF6 (ENSDNOG00000034623) #21	TAF5 (ENSDNOG00000035792) #23	ATP5MK (ENSDNOG00000013833) #24	PDCD11 (ENSDNOG00000013838) #25	CALHM2 (ENSDNOG00000013897) #26	CALHM1 (ENSDNOG00000013901) #27	CALHM3 (ENSDNOG00000009406) #28	NEURL1 (ENSDNOG00000040304) #29	SH3PXD2A (ENSDNOG00000049739) #30
Afrotheria	ANCESTRAL SPECIES	4	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT00390000014952	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Tenrec	MODERN SPECIES	17118																INA (ENSETEG00000019461) #22
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000162369 #20	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Elephant	MODERN SPECIES	3	PSD (ENSLAFG00000006814)	FBXL15 (ENSLAFG00000006822)	CUEDC2 (ENSLAFG00000006828) #7	MFSD13A (ENSLAFG00000005063) #8	ACTR1A (ENSLAFG00000005064) #10	SUFU (ENSLAFG00000005068) #11	TRIM8 (ENSLAFG00000011454) #13	ARL3 (ENSLAFG00000005070) #14	SFXN2 (ENSLAFG00000005072) #15	WBP1L (ENSLAFG00000002043) #16	CYP17A1 (ENSLAFG00000002044) #17	ENSLAFG00000020646 #18	AS3MT (ENSLAFG00000012045)	CNNM2 (ENSLAFG00000012051) #19	NT5C2 (ENSLAFG00000012056) #20	INA (ENSLAFG00000008383) #22	PCGF6 (ENSLAFG00000008386) #21	TAF5 (ENSLAFG00000008391) #23	ATP5MK (ENSLAFG00000008395) #24	PDCD11 (ENSLAFG00000008398) #25	CALHM2 (ENSLAFG00000008403) #26	CALHM1 (ENSLAFG00000008404) #27	CALHM3 (ENSLAFG00000026450) #28	NEURL1 (ENSLAFG00000015401) #29	SH3PXD2A (ENSLAFG00000022244) #30	STN1 (ENSLAFG00000004232) #31	SLK (ENSLAFG00000011452) #33	COL17A1 (ENSLAFG00000011870) #34	SFR1 (ENSLAFG00000000228) #36	ENSLAFG00000000231 #37	ENSLAFG00000027860 #37
Hyrax	MODERN SPECIES	7823																ENSPCAG00000014268 #22
Marsupialia	ANCESTRAL SPECIES		ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00530000064714.cb #37	ENSGT00940000155351.q
Opossum	MODERN SPECIES		PSD (ENSMODG00000011313)	FBXL15 (ENSMODG00000011280)	ENSMODG00000039118	ENSMODG00000011276 #7	MFSD13A (ENSMODG00000011271) #8	ACTR1A (ENSMODG00000011256) #10	SUFU (ENSMODG00000011242) #11	TRIM8 (ENSMODG00000011232) #13	ENSMODG00000011224 #14	SFXN2 (ENSMODG00000011216) #15	WBP1L (ENSMODG00000044404) #16	ENSMODG00000011205 #17	BORCS7 (ENSMODG00000039361) #18	CNNM2 (ENSMODG00000011165) #19	ENSMODG00000011153	INA (ENSMODG00000011125) #22	PCGF6 (ENSMODG00000011120) #21	TAF5 (ENSMODG00000011095) #23	ATP5MK (ENSMODG00000025729) #24	PDCD11 (ENSMODG00000011077) #25	CALHM2 (ENSMODG00000011040) #26	ENSMODG00000038510	CALHM1 (ENSMODG00000011033) #27	CALHM3 (ENSMODG00000011027) #28	NEURL1 (ENSMODG00000011020) #29	SH3PXD2A (ENSMODG00000011016) #30	SLK (ENSMODG00000010985) #33	ENSMODG00000010961	ENSMODG00000010881 #37	ENSMODG00000045729	ENSMODG00000010902 #36
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a.k #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000168158	ENSGT00530000064714.cb #37	ENSGT00940000155351.q
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a.k #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489 #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00530000064714.cb #37	ENSGT00940000155351.q	ENSGT00390000018550 #36
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513 #7	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a.k #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00390000015489.cc #24	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00940000156478.k.b	ENSGT00530000064714.cb #37	ENSGT00940000155351.q
Common wonbat	MODERN SPECIES	581	NFKB2 (ENSVURG00010001689)	PSD (ENSVURG00010001616)	FBXL15 (ENSVURG00010001595)	CUEDC2 (ENSVURG00010001585) #7	MFSD13A (ENSVURG00010001576) #8	ACTR1A (ENSVURG00010001535) #10	SUFU (ENSVURG00010001480) #11	TRIM8 (ENSVURG00010001450) #13	ARL3 (ENSVURG00010001426) #14	SFXN2 (ENSVURG00010001410) #15	WBP1L (ENSVURG00010001384) #16	CYP17A1 (ENSVURG00010001081) #17	BORCS7 (ENSVURG00010001049) #18	CNNM2 (ENSVURG00010001013) #19	ENSVURG00010000957	INA (ENSVURG00010000939) #22	PCGF6 (ENSVURG00010000868) #21	TAF5 (ENSVURG00010000796) #23	ENSVURG00010000772 #24	PDCD11 (ENSVURG00010000713) #25	CALHM2 (ENSVURG00010000704) #26	CALHM1 (ENSVURG00010000699) #27	CALHM3 (ENSVURG00010000669) #28	NEURL1 (ENSVURG00010000653) #29	SH3PXD2A (ENSVURG00010000566) #30	STN1 (ENSVURG00010000526) #31	SLK (ENSVURG00010000384) #33	ENSVURG00010000337	ENSVURG00010000325	ENSVURG00010000168 #37	ENSVURG00010025060
koala	MODERN SPECIES	6	GBF1 (ENSPCIG00000029004)	NFKB2 (ENSPCIG00000028999)	PSD (ENSPCIG00000028997)	FBXL15 (ENSPCIG00000028994)	CUEDC2 (ENSPCIG00000028992) #7	MFSD13A (ENSPCIG00000028991) #8	ACTR1A (ENSPCIG00000028989) #10	SUFU (ENSPCIG00000028985) #11	TRIM8 (ENSPCIG00000028984) #13	ARL3 (ENSPCIG00000028982) #14	WBP1L (ENSPCIG00000018031) #16	ENSPCIG00000018032 #17	BORCS7 (ENSPCIG00000018033) #18	CNNM2 (ENSPCIG00000028980) #19	ENSPCIG00000028855	INA (ENSPCIG00000028312) #22	PCGF6 (ENSPCIG00000028313) #21	TAF5 (ENSPCIG00000001090) #23	ENSPCIG00000001100 #24	PDCD11 (ENSPCIG00000001118) #25	CALHM2 (ENSPCIG00000036143) #26	CALHM1 (ENSPCIG00000001165) #27	CALHM3 (ENSPCIG00000024475) #28
Tasmanian devil	MODERN SPECIES	1	NFKB2 (ENSSHAG00000018852)	PSD (ENSSHAG00000018843)	FBXL15 (ENSSHAG00000028197)	CUEDC2 (ENSSHAG00000018836) #7	MFSD13A (ENSSHAG00000018826) #8	ACTR1A (ENSSHAG00000018823) #10	SUFU (ENSSHAG00000018777) #11	TRIM8 (ENSSHAG00000031236) #13	ARL3 (ENSSHAG00000018738) #14	ENSSHAG00000018726 #15	WBP1L (ENSSHAG00000018684) #16	BORCS7 (ENSSHAG00000018650) #18	CYP17A1 (ENSSHAG00000018660) #17	CNNM2 (ENSSHAG00000018509) #19	ENSSHAG00000018477	INA (ENSSHAG00000018358) #22	PCGF6 (ENSSHAG00000023796) #21	ENSSHAG00000018296 #23	PDCD11 (ENSSHAG00000018258) #25	CALHM2 (ENSSHAG00000022456) #26	CALHM1 (ENSSHAG00000025980) #27	CALHM3 (ENSSHAG00000018221) #28	NEURL1 (ENSSHAG00000018064) #29	SH3PXD2A (ENSSHAG00000017659) #30	STN1 (ENSSHAG00000017550) #31	ENSSHAG00000017376 #33	ENSSHAG00000017266	ENSSHAG00000022398	ENSSHAG00000016910 #37	ENSSHAG00000027679 #36	ENSSHAG00000016427 #37
Sauria	ANCESTRAL SPECIES	8	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000168158	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000168158	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Goode s thornscrub tortoise	MODERN SPECIES	21	MRPL43 (ENSGEVG00005005072)	SEMA4G (ENSGEVG00005005132)	SLF2 (ENSGEVG00005005256)	MFSD13A (ENSGEVG00005005334) #8	ACTR1A (ENSGEVG00005005357) #10	SUFU (ENSGEVG00005005469) #11	TRIM8 (ENSGEVG00005005694) #13	ARL3 (ENSGEVG00005005712) #14	SFXN2 (ENSGEVG00005005736) #15	WBP1L (ENSGEVG00005005761) #16	CYP17A1 (ENSGEVG00005005795) #17	BORCS7 (ENSGEVG00005005827) #18	AS3MT (ENSGEVG00005005861)	CNNM2 (ENSGEVG00005005911) #19	ENSGEVG00005009185	INA (ENSGEVG00005009390) #22	PCGF6 (ENSGEVG00005009433) #21	TAF5 (ENSGEVG00005009475) #23	ENSGEVG00005009520	PDCD11 (ENSGEVG00005009591) #25	CALHM2 (ENSGEVG00005009777) #26	CALHM1 (ENSGEVG00005009808) #27	CALHM3 (ENSGEVG00005009849) #28	NEURL1 (ENSGEVG00005009893) #29	SH3PXD2A (ENSGEVG00005009971) #30	STN1 (ENSGEVG00005010129) #31	SLK (ENSGEVG00005010221) #33	ENSGEVG00005010362	SFR1 (ENSGEVG00005010464) #36	CFAP43 (ENSGEVG00005010554) #37	GSTO1 (ENSGEVG00005010997)
Abingdon island giant tortoise	MODERN SPECIES	1141														CNNM2 (ENSCABG00000012617) #19	ENSCABG00000012619	INA (ENSCABG00000012623) #22	PCGF6 (ENSCABG00000012625) #21	TAF5 (ENSCABG00000012628) #23	ENSCABG00000012631	PDCD11 (ENSCABG00000012639) #25	CALHM2 (ENSCABG00000012652) #26	CALHM1 (ENSCABG00000012656) #27	CALHM3 (ENSCABG00000012660) #28	NEURL1 (ENSCABG00000012663) #29	SH3PXD2A (ENSCABG00000012673) #30	STN1 (ENSCABG00000012694) #31	SLK (ENSCABG00000012791) #33	ENSCABG00000012797	SFR1 (ENSCABG00000012800) #36	ENSCABG00000012803
Emydidae	ANCESTRAL SPECIES	6	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000168158	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
painted turtle	MODERN SPECIES	2388	MRPL43 (ENSCPBG00000003402)	SEMA4G (ENSCPBG00000003347)	SLF2 (ENSCPBG00000003306)	MFSD13A (ENSCPBG00000003273) #8	ACTR1A (ENSCPBG00000003255) #10	SUFU (ENSCPBG00000002443) #11	TRIM8 (ENSCPBG00000002376) #13	ARL3 (ENSCPBG00000002364) #14	SFXN2 (ENSCPBG00000002343) #15	WBP1L (ENSCPBG00000024501) #16	CYP17A1 (ENSCPBG00000024499) #17	BORCS7 (ENSCPBG00000024497) #18	AS3MT (ENSCPBG00000024496)	CNNM2 (ENSCPBG00000024495) #19	ENSCPBG00000024494	INA (ENSCPBG00000024493) #22	PCGF6 (ENSCPBG00000024492) #21	TAF5 (ENSCPBG00000024491) #23	ENSCPBG00000024490	PDCD11 (ENSCPBG00000024487) #25	CALHM2 (ENSCPBG00000024486) #26	CALHM1 (ENSCPBG00000024485) #27	CALHM3 (ENSCPBG00000024484) #28	NEURL1 (ENSCPBG00000024483) #29	SH3PXD2A (ENSCPBG00000024482) #30	STN1 (ENSCPBG00000024481) #31	SLK (ENSCPBG00000024408) #33	ENSCPBG00000024394	SFR1 (ENSCPBG00000024393) #36	CFAP43 (ENSCPBG00000024387) #37	GSTO1 (ENSCPBG00000024383)
Three-toed box turtle	MODERN SPECIES	39	MRPL43 (ENSTMTG00000002961)	SEMA4G (ENSTMTG00000002965)	SLF2 (ENSTMTG00000002972)	MFSD13A (ENSTMTG00000002979) #8	ACTR1A (ENSTMTG00000002990) #10	SUFU (ENSTMTG00000003020) #11	TRIM8 (ENSTMTG00000003124) #13	ARL3 (ENSTMTG00000003142) #14	SFXN2 (ENSTMTG00000003157) #15	WBP1L (ENSTMTG00000003185) #16	CYP17A1 (ENSTMTG00000003197) #17	BORCS7 (ENSTMTG00000003229) #18	AS3MT (ENSTMTG00000003237)	CNNM2 (ENSTMTG00000003262) #19	ENSTMTG00000003377	INA (ENSTMTG00000003452) #22	PCGF6 (ENSTMTG00000003473) #21	ENSTMTG00000003510	TAF5 (ENSTMTG00000003542) #23	ENSTMTG00000003574	PDCD11 (ENSTMTG00000003588) #25	CALHM2 (ENSTMTG00000003669) #26	CALHM1 (ENSTMTG00000003677) #27	CALHM3 (ENSTMTG00000003689) #28	NEURL1 (ENSTMTG00000003710) #29	SH3PXD2A (ENSTMTG00000003816) #30	STN1 (ENSTMTG00000003849) #31	SLK (ENSTMTG00000003888) #33	ENSTMTG00000003930	ENSTMTG00000003970 #37	ENSTMTG00000004055 #37
Archosauria	ANCESTRAL SPECIES	7	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Aves	ANCESTRAL SPECIES	6	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Neognathae	ANCESTRAL SPECIES	7	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Golden eagle	MODERN SPECIES	2	SEMA4G (ENSACCG00020009255)	SLF2 (ENSACCG00020009231)	ENSACCG00020009209	MFSD13A (ENSACCG00020009198) #8	ACTR1A (ENSACCG00020009175) #10	SUFU (ENSACCG00020009151) #11	TRIM8 (ENSACCG00020009134) #13	ARL3 (ENSACCG00020009119) #14	SFXN2 (ENSACCG00020009091) #15	WBP1L (ENSACCG00020009066) #16	CYP17A1 (ENSACCG00020009021) #17	BORCS7 (ENSACCG00020008980) #18	AS3MT (ENSACCG00020008961)	CNNM2 (ENSACCG00020008928) #19	ENSACCG00020008884	INA (ENSACCG00020008852) #22	PCGF6 (ENSACCG00020008830) #21	TAF5 (ENSACCG00020008799) #23	CALHM2 (ENSACCG00020008777) #26	PDCD11 (ENSACCG00020008722) #25	CALHM1 (ENSACCG00020008691) #27	CALHM3 (ENSACCG00020008676) #28	NEURL1 (ENSACCG00020008657) #29	SH3PXD2A (ENSACCG00020008630) #30	STN1 (ENSACCG00020008611) #31	SLK (ENSACCG00020008584) #33	COL17A1 (ENSACCG00020008541) #34	SFR1 (ENSACCG00020008505) #36	ENSACCG00020008494 #37	ENSACCG00020008473 #37	GSTO1 (ENSACCG00020008459)
Kakapo	MODERN SPECIES	22	MRPL43 (ENSSHBG00005002979)	SEMA4G (ENSSHBG00005003005)	SLF2 (ENSSHBG00005003064)	MFSD13A (ENSSHBG00005003113) #8	ACTR1A (ENSSHBG00005003132) #10	SUFU (ENSSHBG00005003152) #11	TRIM8 (ENSSHBG00005003188) #13	ARL3 (ENSSHBG00005003201) #14	SFXN2 (ENSSHBG00005003217) #15	WBP1L (ENSSHBG00005003246) #16	CYP17A1 (ENSSHBG00005003271) #17	BORCS7 (ENSSHBG00005003312) #18	AS3MT (ENSSHBG00005003341)	CNNM2 (ENSSHBG00005003379) #19	ENSSHBG00005003426	INA (ENSSHBG00005003473) #22	PCGF6 (ENSSHBG00005003486) #21	TAF5 (ENSSHBG00005003500) #23	ENSSHBG00005003514	PDCD11 (ENSSHBG00005003710) #25	CALHM2 (ENSSHBG00005003944) #26	CALHM1 (ENSSHBG00005003959) #27	CALHM3 (ENSSHBG00005003981) #28	NEURL1 (ENSSHBG00005003998) #29	SH3PXD2A (ENSSHBG00005004014) #30	STN1 (ENSSHBG00005004031) #31	SLK (ENSSHBG00005004050) #33	SFR1 (ENSSHBG00005004060) #36	ENSSHBG00005004081 #37	ENSSHBG00005004116 #37	GSTO1 (ENSSHBG00005004123)
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Great tit	MODERN SPECIES	26	MRPL43 (ENSPMJG00000004697)	SEMA4G (ENSPMJG00000004711)	SLF2 (ENSPMJG00000004736)	MFSD13A (ENSPMJG00000004758) #8	ACTR1A (ENSPMJG00000004762) #10	SUFU (ENSPMJG00000004763) #11	TRIM8 (ENSPMJG00000004768) #13	ARL3 (ENSPMJG00000004786) #14	SFXN2 (ENSPMJG00000004788) #15	WBP1L (ENSPMJG00000004795) #16	CYP17A1 (ENSPMJG00000004801) #17	BORCS7 (ENSPMJG00000004813) #18	AS3MT (ENSPMJG00000004824)	CNNM2 (ENSPMJG00000004847) #19	ENSPMJG00000004864	ENSPMJG00000004870 #22	PCGF6 (ENSPMJG00000004871) #21	TAF5 (ENSPMJG00000004873) #23	ENSPMJG00000004884	PDCD11 (ENSPMJG00000004885) #25	CALHM2 (ENSPMJG00000004894) #26	CALHM1 (ENSPMJG00000004895) #27	CALHM3 (ENSPMJG00000004896) #28	NEURL1 (ENSPMJG00000004900) #29	SH3PXD2A (ENSPMJG00000004903) #30	STN1 (ENSPMJG00000004908) #31	SLK (ENSPMJG00000004918) #33	COL17A1 (ENSPMJG00000004922) #34	SFR1 (ENSPMJG00000004933) #36	CFAP43 (ENSPMJG00000004936) #37	GSTO1 (ENSPMJG00000004953)
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Medium ground finch	MODERN SPECIES	3	TWNK (ENSGFOG00000003482)	SEMA4G (ENSGFOG00000003465)	ENSGFOG00000003429	MFSD13A (ENSGFOG00000003413) #8	ACTR1A (ENSGFOG00000003336) #10	SUFU (ENSGFOG00000003217) #11	TRIM8 (ENSGFOG00000003192) #13	ARL3 (ENSGFOG00000003169) #14	SFXN2 (ENSGFOG00000003144) #15	WBP1L (ENSGFOG00000003125) #16	CYP17A1 (ENSGFOG00000003105) #17	BORCS7 (ENSGFOG00000003091) #18	AS3MT (ENSGFOG00000003051)	CNNM2 (ENSGFOG00000002873) #19	ENSGFOG00000002800	ENSGFOG00000002787 #22	PCGF6 (ENSGFOG00000002773) #21	TAF5 (ENSGFOG00000002614) #23	ENSGFOG00000002587	PDCD11 (ENSGFOG00000002545) #25	CALHM2 (ENSGFOG00000002524) #26	CALHM1 (ENSGFOG00000002507) #27	CALHM3 (ENSGFOG00000002487) #28	NEURL1 (ENSGFOG00000002459) #29	SH3PXD2A (ENSGFOG00000002444) #30	STN1 (ENSGFOG00000002147) #31	SLK (ENSGFOG00000002125) #33	COL17A1 (ENSGFOG00000002087) #34	SFR1 (ENSGFOG00000002070) #36	CFAP43 (ENSGFOG00000002038) #37	GSTO1 (ENSGFOG00000002031)
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Zebra finch	MODERN SPECIES	28	SLF2 (ENSTGUG00000010094)	MFSD13A (ENSTGUG00000010110) #8	ACTR1A (ENSTGUG00000010114) #10	SUFU (ENSTGUG00000010131) #11	ENSTGUG00000024526	TRIM8 (ENSTGUG00000010157) #13	ARL3 (ENSTGUG00000019757) #14	SFXN2 (ENSTGUG00000010190) #15	WBP1L (ENSTGUG00000019651) #16	CYP17A1 (ENSTGUG00000010219) #17	BORCS7 (ENSTGUG00000010228) #18	AS3MT (ENSTGUG00000010233)	CNNM2 (ENSTGUG00000010244) #19	ENSTGUG00000010251	PCGF6 (ENSTGUG00000021064) #21	INA (ENSTGUG00000010268) #22	PDCD11 (ENSTGUG00000010303) #25	TAF5 (ENSTGUG00000010278) #23	ENSTGUG00000020703	CALHM2 (ENSTGUG00000010317) #26	CALHM1 (ENSTGUG00000010322) #27	CALHM3 (ENSTGUG00000010326) #28	NEURL1 (ENSTGUG00000010332) #29	SH3PXD2A (ENSTGUG00000010339) #30	STN1 (ENSTGUG00000010354) #31	SLK (ENSTGUG00000010378) #33	COL17A1 (ENSTGUG00000010406) #34	SFR1 (ENSTGUG00000028915) #36	CFAP43 (ENSTGUG00000010429) #37	GSTO1 (ENSTGUG00000010435)	ITPRIP (ENSTGUG00000010438)
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Japanese quail	MODERN SPECIES	24	MRPL43 (ENSCJPG00005019978)	SEMA4G (ENSCJPG00005019979)	SLF2 (ENSCJPG00005019981)	MFSD13A (ENSCJPG00005019982) #8	ACTR1A (ENSCJPG00005019983) #10	SUFU (ENSCJPG00005019984) #11	TRIM8 (ENSCJPG00005019986) #13	ARL3 (ENSCJPG00005019987) #14	SFXN2 (ENSCJPG00005019988) #15	WBP1L (ENSCJPG00005019989) #16	CYP17A1 (ENSCJPG00005019990) #17	BORCS7 (ENSCJPG00005019991) #18	AS3MT (ENSCJPG00005019992)	CNNM2 (ENSCJPG00005019993) #19	ENSCJPG00005019994	INA (ENSCJPG00005019995) #22	PCGF6 (ENSCJPG00005019996) #21	TAF5 (ENSCJPG00005019997) #23	ENSCJPG00005019998	PDCD11 (ENSCJPG00005019999) #25	CALHM2 (ENSCJPG00005020000) #26	CALHM1 (ENSCJPG00005020001) #27	CALHM3 (ENSCJPG00005020002) #28	NEURL1 (ENSCJPG00005020003) #29	SH3PXD2A (ENSCJPG00005020004) #30	STN1 (ENSCJPG00005020005) #31	SLK (ENSCJPG00005020006) #33	SFR1 (ENSCJPG00005020009) #36	CFAP43 (ENSCJPG00005020010) #37	GSTO1 (ENSCJPG00005020011)	ITPRIP (ENSCJPG00005020012)
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Chicken	MODERN SPECIES	35	SEMA4G (ENSGALG00010018515)	ENSGALG00010018526	MFSD13A (ENSGALG00010018532) #8	ACTR1A (ENSGALG00010018561) #10	SUFU (ENSGALG00010018581) #11	TRIM8 (ENSGALG00010018608) #13	ENSGALG00010018621	ARL3 (ENSGALG00010018685) #14	SFXN2 (ENSGALG00010018701) #15	WBP1L (ENSGALG00010018831) #16	CYP17A1 (ENSGALG00010018183) #17	BORCS7 (ENSGALG00010018199) #18	AS3MT (ENSGALG00010018229)	CNNM2 (ENSGALG00010021065) #19	NT5C2 (ENSGALG00010021095)	INA (ENSGALG00010021104) #22	PCGF6 (ENSGALG00010021108) #21	TAF5 (ENSGALG00010021112) #23	USMG5 (ENSGALG00010021118)	PDCD11 (ENSGALG00010021120) #25	CALHM2 (ENSGALG00010021124) #26	CALHM1 (ENSGALG00010021128) #27	CALHM3 (ENSGALG00010021132) #28	NEURL1 (ENSGALG00010021166) #29	SH3PXD2A (ENSGALG00010021215) #30	STN1 (ENSGALG00010021231) #31	SLK (ENSGALG00010021240) #33	COL17A1 (ENSGALG00010021287) #34	SFR1 (ENSGALG00010021342) #36	CFAP43 (ENSGALG00010021352) #37	GSTO2 (ENSGALG00010021390)
Turkey	MODERN SPECIES	28	LZTS2 (ENSMGAG00000010236)	TWNK (ENSMGAG00000010237)	SEMA4G (ENSMGAG00000010240)	SLF2 (ENSMGAG00000010255)	MFSD13A (ENSMGAG00000010269) #8	ACTR1A (ENSMGAG00000010274) #10	SUFU (ENSMGAG00000010288) #11	TRIM8 (ENSMGAG00000010315) #13	ARL3 (ENSMGAG00000010320) #14	SFXN2 (ENSMGAG00000010330) #15	WBP1L (ENSMGAG00000010362) #16	CYP17A1 (ENSMGAG00000010364) #17	AS3MT (ENSMGAG00000010402)	CNNM2 (ENSMGAG00000016951) #19	ENSMGAG00000010436	ENSMGAG00000020111 #22	PCGF6 (ENSMGAG00000019850) #21	TAF5 (ENSMGAG00000010475) #23	ENSMGAG00000022024	PDCD11 (ENSMGAG00000010482) #25	CALHM2 (ENSMGAG00000010516) #26	CALHM1 (ENSMGAG00000010522) #27	CALHM3 (ENSMGAG00000010524) #28	NEURL1 (ENSMGAG00000010527) #29	SH3PXD2A (ENSMGAG00000010540) #30	STN1 (ENSMGAG00000010550) #31	SLK (ENSMGAG00000010557) #33	COL17A1 (ENSMGAG00000010621) #34	SFR1 (ENSMGAG00000010591) #36	CFAP43 (ENSMGAG00000010597) #37	GSTO1 (ENSMGAG00000010660)
Anatidae	ANCESTRAL SPECIES	4	ENSGT00980000202932	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Duck	DUPLICATION
Duck	MODERN SPECIES	24	ENSAPLG00000008660	BTRC (ENSAPLG00000008388)	LBX1 (ENSAPLG00000026975)	SLF2 (ENSAPLG00000004041)	MFSD13A (ENSAPLG00000003639) #8	SUFU (ENSAPLG00000002654) #11	TRIM8 (ENSAPLG00000002530) #13	ARL3 (ENSAPLG00000016017) #14	SFXN2 (ENSAPLG00000030360) #15	WBP1L (ENSAPLG00000012879) #16	CYP17A1 (ENSAPLG00000012297) #17	BORCS7 (ENSAPLG00000004416) #18	CNNM2 (ENSAPLG00000013829) #19	ENSAPLG00000023786 #20	ENSAPLG00000018565 #22	ENSAPLG00000027671 #22	PCGF6 (ENSAPLG00000026176) #21	TAF5 (ENSAPLG00000011406) #23	ENSAPLG00000019499	PDCD11 (ENSAPLG00000010301) #25	CALHM2 (ENSAPLG00000019475) #26	CALHM1 (ENSAPLG00000010081) #27	CALHM3 (ENSAPLG00000015563) #28	NEURL1 (ENSAPLG00000006704) #29	SH3PXD2A (ENSAPLG00000006691) #30	STN1 (ENSAPLG00000006661) #31	SLK (ENSAPLG00000006212) #33	COL17A1 (ENSAPLG00000006175) #34	SFR1 (ENSAPLG00000016782) #36	CFAP43 (ENSAPLG00000006084) #37	ITPRIP (ENSAPLG00000005949)
Duck	MODERN SPECIES	24	DPCD (ENSAPLG00000010260)	ENSAPLG00000008660	BTRC (ENSAPLG00000008388)	LBX1 (ENSAPLG00000026975)	SLF2 (ENSAPLG00000004041)	MFSD13A (ENSAPLG00000003639) #8	SUFU (ENSAPLG00000002654) #11	TRIM8 (ENSAPLG00000002530) #13	ARL3 (ENSAPLG00000016017) #14	SFXN2 (ENSAPLG00000030360) #15	WBP1L (ENSAPLG00000012879) #16	CYP17A1 (ENSAPLG00000012297) #17	BORCS7 (ENSAPLG00000004416) #18	CNNM2 (ENSAPLG00000013829) #19	ENSAPLG00000023786 #20	ENSAPLG00000018565 #22	ENSAPLG00000027671 #22	PCGF6 (ENSAPLG00000026176) #21	TAF5 (ENSAPLG00000011406) #23	ENSAPLG00000019499	PDCD11 (ENSAPLG00000010301) #25	CALHM2 (ENSAPLG00000019475) #26	CALHM1 (ENSAPLG00000010081) #27	CALHM3 (ENSAPLG00000015563) #28	NEURL1 (ENSAPLG00000006704) #29	SH3PXD2A (ENSAPLG00000006691) #30	STN1 (ENSAPLG00000006661) #31	SLK (ENSAPLG00000006212) #33	COL17A1 (ENSAPLG00000006175) #34	SFR1 (ENSAPLG00000016782) #36	CFAP43 (ENSAPLG00000006084) #37
Pink-footed goose	MODERN SPECIES	11	ENSABRG00000007555	SEMA4G (ENSABRG00000007538)	SLF2 (ENSABRG00000007530)	MFSD13A (ENSABRG00000007521) #8	ACTR1A (ENSABRG00000007506) #10	SUFU (ENSABRG00000007415) #11	TRIM8 (ENSABRG00000007399) #13	ARL3 (ENSABRG00000007391) #14	SFXN2 (ENSABRG00000007382) #15	WBP1L (ENSABRG00000007376) #16	CYP17A1 (ENSABRG00000007357) #17	BORCS7 (ENSABRG00000007354) #18	AS3MT (ENSABRG00000007335)	CNNM2 (ENSABRG00000007326) #19	ENSABRG00000007316	INA (ENSABRG00000007311) #22	PCGF6 (ENSABRG00000007251) #21	TAF5 (ENSABRG00000007239) #23	ENSABRG00000007233	PDCD11 (ENSABRG00000007218) #25	CALHM2 (ENSABRG00000007215) #26	CALHM1 (ENSABRG00000007212) #27	CALHM3 (ENSABRG00000007209) #28	NEURL1 (ENSABRG00000007194) #29	SH3PXD2A (ENSABRG00000007174) #30	STN1 (ENSABRG00000007161) #31	SLK (ENSABRG00000007148) #33	COL17A1 (ENSABRG00000007126) #34	SFR1 (ENSABRG00000007118) #36	CFAP43 (ENSABRG00000007106) #37	GSTO1 (ENSABRG00000007104)
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b.v #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000168158	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37
Episquamata	ANCESTRAL SPECIES	2	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b.v #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b.u #17	ENSGT00940000155588.b.v #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000168158	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Elapidae	ANCESTRAL SPECIES	4	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b.u #17	ENSGT00940000155588.b.v #17	ENSGT00390000015849 #18	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT01030000236482	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000168158	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351.o
Indian cobra	MODERN SPECIES	3	ENSNNAG00000015050	SEMA4G (ENSNNAG00000015031)	SLF2 (ENSNNAG00000014985)	MFSD13A (ENSNNAG00000014965) #8	ACTR1A (ENSNNAG00000014936) #10	SUFU (ENSNNAG00000014922) #11	TRIM8 (ENSNNAG00000014881) #13	ARL3 (ENSNNAG00000014865) #14	SFXN2 (ENSNNAG00000014833) #15	WBP1L (ENSNNAG00000014802) #16	ENSNNAG00000014782 #17	ENSNNAG00000014755 #17	BORCS7 (ENSNNAG00000014735) #18	CNNM2 (ENSNNAG00000014688) #19	ENSNNAG00000014527	INA (ENSNNAG00000014506) #22	PCGF6 (ENSNNAG00000014483) #21	TAF5 (ENSNNAG00000014456) #23	ENSNNAG00000014447	PDCD11 (ENSNNAG00000014210) #25	CALHM2 (ENSNNAG00000014158) #26	CALHM1 (ENSNNAG00000014135) #27	CALHM3 (ENSNNAG00000014121) #28	NEURL1 (ENSNNAG00000014090) #29	SH3PXD2A (ENSNNAG00000014011) #30	STN1 (ENSNNAG00000013991) #31	SLK (ENSNNAG00000013794) #33	ENSNNAG00000013739	SFR1 (ENSNNAG00000013731) #36	CFAP43 (ENSNNAG00000013647) #37	ENSNNAG00000013626
Elapidae_a	ANCESTRAL SPECIES		ENSGT00390000004495	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b.v #17	ENSGT00390000015849 #18	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT01030000236482	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000168158	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351.o
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00390000004495	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b.v #17	ENSGT00390000015849 #18	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT01030000236482	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000168158	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351.o
Mainland tiger snake	MODERN SPECIES		LZTS2 (ENSNSUG00000006586)	TWNK (ENSNSUG00000006583)	MRPL43 (ENSNSUG00000006581)	SEMA4G (ENSNSUG00000006578)	MFSD13A (ENSNSUG00000006576) #8	ACTR1A (ENSNSUG00000006559) #10	SUFU (ENSNSUG00000006548) #11	TRIM8 (ENSNSUG00000006547) #13	ARL3 (ENSNSUG00000006546) #14	SFXN2 (ENSNSUG00000006456) #15	WBP1L (ENSNSUG00000006455) #16	CYP17A1 (ENSNSUG00000006374) #17	BORCS7 (ENSNSUG00000006370) #18	CNNM2 (ENSNSUG00000006339) #19	ENSNSUG00000006332	INA (ENSNSUG00000006300) #22	ENSNSUG00000006299 #21	ENSNSUG00000006298 #21	TAF5 (ENSNSUG00000006297) #23	ENSNSUG00000006296	PDCD11 (ENSNSUG00000006057) #25	CALHM2 (ENSNSUG00000006056) #26	CALHM1 (ENSNSUG00000006055) #27	CALHM3 (ENSNSUG00000006054) #28	NEURL1 (ENSNSUG00000006040) #29	SH3PXD2A (ENSNSUG00000006039) #30	STN1 (ENSNSUG00000005927) #31	SLK (ENSNSUG00000005155) #33	ENSNSUG00000005149	SFR1 (ENSNSUG00000005147) #36	ENSNSUG00000005146 #37
Eastern brown snake	MODERN SPECIES	25	TWNK (ENSPTXG00000000436)	MRPL43 (ENSPTXG00000000442)	SEMA4G (ENSPTXG00000000461)	ENSPTXG00000000481	MFSD13A (ENSPTXG00000000501) #8	ACTR1A (ENSPTXG00000000511) #10	SUFU (ENSPTXG00000000522) #11	TRIM8 (ENSPTXG00000000536) #13	ARL3 (ENSPTXG00000000545) #14	SFXN2 (ENSPTXG00000000558) #15	WBP1L (ENSPTXG00000000567) #16	CYP17A1 (ENSPTXG00000000602) #17	BORCS7 (ENSPTXG00000000854) #18	CNNM2 (ENSPTXG00000000855) #19	ENSPTXG00000000856	INA (ENSPTXG00000000859) #22	PCGF6 (ENSPTXG00000000878) #21	TAF5 (ENSPTXG00000000881) #23	ENSPTXG00000000883	PDCD11 (ENSPTXG00000000924) #25	CALHM2 (ENSPTXG00000001025) #26	CALHM1 (ENSPTXG00000001028) #27	CALHM3 (ENSPTXG00000001030) #28	NEURL1 (ENSPTXG00000001034) #29	SH3PXD2A (ENSPTXG00000001038) #30	STN1 (ENSPTXG00000001053) #31	SLK (ENSPTXG00000001147) #33	ENSPTXG00000001161	SFR1 (ENSPTXG00000001166) #36	ENSPTXG00000001172 #37	ENSPTXG00000001183 #37
Blue-lipped sea krait	MODERN SPECIES	1742																INA (ENSLLTG00000007608) #22	PCGF6 (ENSLLTG00000007646) #21	TAF5 (ENSLLTG00000007770) #23	ENSLLTG00000007816
Lizard	MODERN SPECIES	2	TRIM8 (ENSACAG00000004201) #13	ENSACAG00000036717	ENSACAG00000043300	ENSACAG00000039803	ARL3 (ENSACAG00000043266) #14	ENSACAG00000036316	SFXN2 (ENSACAG00000004270) #15	WBP1L (ENSACAG00000040095) #16	ENSACAG00000004350 #17	ENSACAG00000043026 #17	BORCS7 (ENSACAG00000042978) #18	AS3MT (ENSACAG00000029427)	CNNM2 (ENSACAG00000004555) #19	ENSACAG00000042108	ENSACAG00000004601	ENSACAG00000004712 #22	PCGF6 (ENSACAG00000029126) #21	TAF5 (ENSACAG00000004756) #23	ENSACAG00000044621	PDCD11 (ENSACAG00000004796) #25	CALHM2 (ENSACAG00000004916) #26	CALHM1 (ENSACAG00000008401) #27	CALHM3 (ENSACAG00000004919) #28	NEURL1 (ENSACAG00000004920) #29	SH3PXD2A (ENSACAG00000004932) #30	STN1 (ENSACAG00000004954) #31	SLK (ENSACAG00000004988) #33	ENSACAG00000005136	SFR1 (ENSACAG00000037852) #36	CFAP43 (ENSACAG00000005165) #37	ENSACAG00000005210
Laterata	ANCESTRAL SPECIES		ENSGT00390000004495	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b.v #17	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000161242 #34	ENSGT00390000018550 #36	ENSGT00530000064714 #37	ENSGT00940000155351
Common wall lizard	MODERN SPECIES	13	SEMA4G (ENSPMRG00000004128)	SLF2 (ENSPMRG00000004050)	ENSPMRG00000004035 #8	ACTR1A (ENSPMRG00000004019) #10	SUFU (ENSPMRG00000003985) #11	ENSPMRG00000003967	ENSPMRG00000003961	TRIM8 (ENSPMRG00000003954) #13	ARL3 (ENSPMRG00000003951) #14	SFXN2 (ENSPMRG00000003945) #15	WBP1L (ENSPMRG00000003937) #16	CYP17A1 (ENSPMRG00000003910) #17	AS3MT (ENSPMRG00000003894)	CNNM2 (ENSPMRG00000003889) #19	ENSPMRG00000003857	INA (ENSPMRG00000003841) #22	PCGF6 (ENSPMRG00000003838) #21	TAF5 (ENSPMRG00000003816) #23	ENSPMRG00000003807	PDCD11 (ENSPMRG00000003794) #25	CALHM2 (ENSPMRG00000003787) #26	CALHM1 (ENSPMRG00000003784) #27	CALHM3 (ENSPMRG00000003782) #28	NEURL1 (ENSPMRG00000003774) #29	ENSPMRG00000003770 #29	SH3PXD2A (ENSPMRG00000003762) #30	STN1 (ENSPMRG00000003752) #31	SLK (ENSPMRG00000003737) #33	ENSPMRG00000003729	ENSPMRG00000003725	ENSPMRG00000003723
Argentine black and white tegu	MODERN SPECIES	48	SEMA4G (ENSSMRG00000007127)	ENSSMRG00000007144	ENSSMRG00000007154	MFSD13A (ENSSMRG00000007161) #8	ACTR1A (ENSSMRG00000007165) #10	SUFU (ENSSMRG00000007169) #11	TRIM8 (ENSSMRG00000007177) #13	ARL3 (ENSSMRG00000007182) #14	SFXN2 (ENSSMRG00000007184) #15	WBP1L (ENSSMRG00000007196) #16	BORCS7 (ENSSMRG00000007198) #18	CYP17A1 (ENSSMRG00000007206) #17	AS3MT (ENSSMRG00000007298)	CNNM2 (ENSSMRG00000007300) #19	ENSSMRG00000007327	INA (ENSSMRG00000007346) #22	PCGF6 (ENSSMRG00000007357) #21	TAF5 (ENSSMRG00000007365) #23	ENSSMRG00000007366	PDCD11 (ENSSMRG00000007373) #25	CALHM2 (ENSSMRG00000007689) #26	CALHM1 (ENSSMRG00000007696) #27	CALHM3 (ENSSMRG00000007700) #28	NEURL1 (ENSSMRG00000007702) #29	SH3PXD2A (ENSSMRG00000007713) #30	STN1 (ENSSMRG00000007719) #31	SLK (ENSSMRG00000007721) #33	COL17A1 (ENSSMRG00000007725) #34	SFR1 (ENSSMRG00000007728) #36	CFAP43 (ENSSMRG00000007729) #37	GSTO1 (ENSSMRG00000007742)
tuatara	MODERN SPECIES	1056	SEMA4G (ENSSPUG00000011303)	ENSSPUG00000011292	ENSSPUG00000011281	MFSD13A (ENSSPUG00000011253) #8	ACTR1A (ENSSPUG00000011211) #10	SUFU (ENSSPUG00000011181) #11	TRIM8 (ENSSPUG00000011167) #13	ARL3 (ENSSPUG00000011154) #14	SFXN2 (ENSSPUG00000011143) #15	WBP1L (ENSSPUG00000011131) #16	CYP17A1 (ENSSPUG00000011092) #17	BORCS7 (ENSSPUG00000011069) #18	AS3MT (ENSSPUG00000011056)	CNNM2 (ENSSPUG00000011002) #19	ENSSPUG00000010969	INA (ENSSPUG00000010955) #22	PCGF6 (ENSSPUG00000010948) #21	ENSSPUG00000010908	CALHM2 (ENSSPUG00000010854) #26	CALHM1 (ENSSPUG00000010841) #27	CALHM3 (ENSSPUG00000010832) #28	NEURL1 (ENSSPUG00000010823) #29	SH3PXD2A (ENSSPUG00000010795) #30
Anura	ANCESTRAL SPECIES	25	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000160317 #8	ENSGT00940000155782 #10	ENSGT00390000009747 #11	ENSGT00940000157919 #13	ENSGT00940000155737.a.b ##14	ENSGT00940000155737.b #14	ENSGT01030000234641.b.a.a #15	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT00940000156696.B #29	ENSGT00940000157732 #30	ENSGT00390000000909 #31	ENSGT00940000156184 #33	ENSGT00940000168158	ENSGT00940000163514.C	ENSGT00390000018550 #36	ENSGT00940000155351
Leishan spiny toad	MODERN SPECIES	9	ENSLLEG00000029508	MFSD13A (ENSLLEG00000029498) #8	ACTR1A (ENSLLEG00000029252) #10	SUFU (ENSLLEG00000029113) #11	TRIM8 (ENSLLEG00000029051) #13	ENSLLEG00000029023 ##14	SFXN2 (ENSLLEG00000029000) #15	WBP1L (ENSLLEG00000028803) #16	CYP17A1 (ENSLLEG00000028763) #17	BORCS7 (ENSLLEG00000028736) #18	ENSLLEG00000028642	ENSLLEG00000028609	ENSLLEG00000028460	CNNM2 (ENSLLEG00000028384) #19	ENSLLEG00000028130	INA (ENSLLEG00000028090) #22	PCGF6 (ENSLLEG00000027942) #21	TAF5 (ENSLLEG00000027307) #23	ENSLLEG00000027203	PDCD11 (ENSLLEG00000026943) #25	ENSLLEG00000026851	CALHM2 (ENSLLEG00000026828) #26	CALHM1 (ENSLLEG00000026794) #27	CALHM3 (ENSLLEG00000026757) #28	ENSLLEG00000026720 #28	NEURL1 (ENSLLEG00000026595) #29	SH3PXD2A (ENSLLEG00000026291) #30	STN1 (ENSLLEG00000026144) #31	SLK (ENSLLEG00000025533) #33	ENSLLEG00000025427	ENSLLEG00000025335
Frog	MODERN SPECIES	7	ENSXETG00000046745	mfsd13a (ENSXETG00000015216) #8	ENSXETG00000045462	actr1a (ENSXETG00000015217) #10	sufu (ENSXETG00000015219) #11	trim8 (ENSXETG00000032863) #13	ENSXETG00000048305	arl3 (ENSXETG00000015225) #14	sfxn2 (ENSXETG00000015227) #15	wbp1l (ENSXETG00000031465) #16	cyp17a1 (ENSXETG00000015229) #17	borcs7 (ENSXETG00000037489) #18	as3mt.2 (ENSXETG00000031996)	cnnm2 (ENSXETG00000009464) #19	nt5c2 (ENSXETG00000009475)	ina (ENSXETG00000009478) #22	pcgf6 (ENSXETG00000038066) #21	taf5 (ENSXETG00000011394) #23	atp5mk (ENSXETG00000034854)	pdcd11 (ENSXETG00000009482) #25	calhm2 (ENSXETG00000011395) #26	calhm1 (ENSXETG00000031601) #27	calhm3 (ENSXETG00000033589) #28	neurl1 (ENSXETG00000011397) #29	sh3pxd2a (ENSXETG00000011399) #30	ENSXETG00000047506	stn1 (ENSXETG00000011402) #31	slk (ENSXETG00000030054) #33	col17a1 (ENSXETG00000033563)	sfr1 (ENSXETG00000011407) #36	gsto2 (ENSXETG00000026602)
Coelacanth	MODERN SPECIES	1427												ENSLACG00000002153	TAF5 (ENSLACG00000002684) #23	CNNM2 (ENSLACG00000003923) #19	nt5c2a (ENSLACG00000008768)	INA (ENSLACG00000010740) #22	ENSLACG00000011388 #21	pcgf6 (ENSLACG00000012061) #21
Actinopterygii	ANCESTRAL SPECIES	29	ENSGT00940000182429	ENSGT00940000158698	ENSGT00940000161756	ENSGT00940000159672	ENSGT00940000164095	ENSGT00940000159518	ENSGT00390000005029	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT01050000244827.D.b.b	ENSGT00940000155351	ENSGT00530000064714 #37	ENSGT00390000018550 #36	ENSGT00940000168158	ENSGT00940000156184 #33	ENSGT00390000000909 #31	ENSGT00940000157732.f.a #30
Neopterygii	ANCESTRAL SPECIES	33	ENSGT01030000234543.B	ENSGT00940000158698	ENSGT00940000164611	ENSGT00940000159672	ENSGT00940000164095	ENSGT00940000159518	ENSGT00390000005029	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT01050000244827.D.b.b	ENSGT00940000155351	ENSGT00530000064714 #37	ENSGT00390000018550 #36	ENSGT00940000168136	ENSGT00940000156184 #33	ENSGT00390000000909 #31
Osteoglossocephalai	ANCESTRAL SPECIES	92	ENSGT00940000164095.b	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00390000006243	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00950000183109.c.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT00940000166025.b	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896	ENSGT00940000155351	ENSGT00530000064714 #37	ENSGT00390000018550 #36	ENSGT00940000168136
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES	141	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a	ENSGT00390000009155	ENSGT00940000158698	ENSGT00940000164611.a.b	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00950000183109.c.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21
Otomorpha	ANCESTRAL SPECIES	10	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a	ENSGT00390000009155	ENSGT00940000158698	ENSGT00940000164611.a.b	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00950000183109.c.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21
Otophysi	ANCESTRAL SPECIES	26	ENSGT00940000155933.b.a	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a	ENSGT00390000009155	ENSGT00940000158698	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00950000183109.c.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00950000183100.B	ENSGT00390000005639.a.b.d.a	ENSGT00530000063586.a	ENSGT00390000001546	ENSGT00940000165188	ENSGT00940000157052	ENSGT00390000010398.A	ENSGT00950000182815.a.a.a.b	ENSGT00940000154741.c	ENSGT00390000003652.c.b	ENSGT00950000183125.b.a.b	ENSGT00390000002871	ENSGT01060000248556.A.b.a	ENSGT00940000159449.d
Cyprinoidei	ANCESTRAL SPECIES	11	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a	ENSGT00390000009155	ENSGT00940000158698	ENSGT00940000164611.b	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00950000183109.c.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00950000183100.B	ENSGT00390000005639.a.b.d.a	ENSGT00530000063586.a	ENSGT00390000001546	ENSGT00940000165188	ENSGT00940000157052	ENSGT00390000010398.A	ENSGT00950000182815.a.a.a.b	ENSGT00940000154741.c	ENSGT00390000003652.c.b	ENSGT00950000183125.b.a.b	ENSGT00390000002871	ENSGT01060000248556.A.b.a	ENSGT00940000159449.d
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	384	ENSGT00940000155134.y.c	ENSGT00950000183045.A.a.a.p	ENSGT00390000018730.B.c.b	ENSGT00940000159583.n	ENSGT00940000155884.a.e	ENSGT00390000009155.b	ENSGT00940000158698.j	ENSGT00940000164611.b.k.a	ENSGT00940000164095.a.a	ENSGT00940000159518.a.b	ENSGT00390000005029.f	ENSGT00950000183109.c.a.a.a.a.b #16	ENSGT00390000015849.i.a.b #18	ENSGT00940000159034.kb.a #19	ENSGT00940000163289.b.a.b.c	ENSGT00940000154418.a.a.a.a #22	ENSGT00940000158034.o #21	ENSGT00950000183100.B.b	ENSGT00390000005639.a.b.d.a.b	ENSGT00530000063586.a.e	ENSGT00390000001546.c	ENSGT00940000165188.b	ENSGT00940000157052.c	ENSGT00390000010398.A.c	ENSGT00950000182815.a.a.a.b.b	ENSGT00940000154741.c.a	ENSGT00390000003652.c.b.a	ENSGT01060000248556.A.b.a.b	ENSGT00940000159449.d.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	901															nt5c2a (ENSCARG00000035369)	inaa (ENSCARG00000035377) #22	pcgf6 (ENSCARG00000035383) #21	polr1c (ENSCARG00000035396)
Goldfish	MODERN SPECIES	4	RIMS1 (ENSCARG00000002394)	asrgl1 (ENSCARG00000010412)	OGFRL1 (ENSCARG00000010381)	b3gat2 (ENSCARG00000010362)	smap1 (ENSCARG00000010288)	SDHAF4 (ENSCARG00000010273)	tlx1 (ENSCARG00000010261)	ENSCARG00000010255	slc2a15a (ENSCARG00000010237)	fgf8a (ENSCARG00000010217)	fbxw4 (ENSCARG00000010202)	wbp1la (ENSCARG00000010199) #16	borcs7 (ENSCARG00000010191) #18	cnnm2a (ENSCARG00000010165) #19	nt5c2a (ENSCARG00000009652)	inaa (ENSCARG00000009609) #22	pcgf6 (ENSCARG00000009593) #21	POLR1C (ENSCARG00000009582)	ldb1a (ENSCARG00000008642)	ENSCARG00000008560	ENSCARG00000008552	nsmce4a (ENSCARG00000008542)	ENSCARG00000008515	ly6pge (ENSCARG00000008506)	ENSCARG00000008502	pald1b (ENSCARG00000008400)	rps24 (ENSCARG00000008367)	flrt3 (ENSCARG00000008358)	mad2l1bp (ENSCARG00000008350)	ENSCARG00000008328	mgme1 (ENSCARG00000008319)
Cyprininae_a	ANCESTRAL SPECIES	107	ENSGT00390000018730.B.c.b	ENSGT00940000159583.n	ENSGT00940000155884.a.e	ENSGT00390000009155.b	ENSGT00940000158698.j	ENSGT00940000164611.b.k.a	ENSGT00940000164095.a.a	ENSGT00940000159518.a.b	ENSGT00390000005029.f	ENSGT00950000183109.c.a.a.a.a.b #16	ENSGT00940000155588.b.b #17	ENSGT00390000015849.j #18	ENSGT00390000015849.i.a.b #18	ENSGT00940000159034.kb.a #19	ENSGT00940000163289.b.a.b.c	ENSGT00940000154418.a.a.a.a #22	ENSGT00940000158034.o #21	ENSGT00950000183100.B.b	ENSGT00390000005639.a.b.d.a.b	ENSGT00530000063586.a.e	ENSGT00390000001546.c	ENSGT00940000165188.b	ENSGT00940000157052.c	ENSGT00390000010398.A.c	ENSGT00950000182815.a.a.a.b.b	ENSGT00940000154741.c.a	ENSGT00950000183125.b.a.b.d	ENSGT00390000003652.c.b.a	ENSGT01060000248556.A.b.a.b	ENSGT00940000159449.d.b	ENSGT00940000156033.e.b
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	68	asrgl1 (ENSSGRG00000028425)	OGFRL1 (ENSSGRG00000028414)	b3gat2 (ENSSGRG00000028412)	smap1 (ENSSGRG00000028411)	SDHAF4 (ENSSGRG00000028409)	tlx1 (ENSSGRG00000028408)	ENSSGRG00000028407	slc2a15a (ENSSGRG00000028377)	fgf8a (ENSSGRG00000028374)	fbxw4 (ENSSGRG00000028373)	wbp1la (ENSSGRG00000028372) #16	cyp17a1 (ENSSGRG00000028369) #17	borcs7 (ENSSGRG00000028368) #18	cnnm2a (ENSSGRG00000028351) #19	nt5c2a (ENSSGRG00000027341)	inaa (ENSSGRG00000027325) #22	pcgf6 (ENSSGRG00000027324) #21	POLR1C (ENSSGRG00000027316)	ldb1a (ENSSGRG00000027260)	ENSSGRG00000027253	ENSSGRG00000027248	nsmce4a (ENSSGRG00000027234)	ENSSGRG00000027198	ly6pge (ENSSGRG00000027196)	unc5b (ENSSGRG00000027176)	MYOF (ENSSGRG00000026718)	OGDHL (ENSSGRG00000026698)	zgc:153142 (ENSSGRG00000026695)	chata (ENSSGRG00000026675)	rgra (ENSSGRG00000026669)	lrit1a (ENSSGRG00000026668)
Golden-line barbel	MODERN SPECIES	3757															ENSSGRG00000005487	inaa (ENSSGRG00000005486) #22
Common carp reference	MODERN SPECIES	18	ENSCCRG00000013245	OGFRL1 (ENSCCRG00000020959)	b3gat2 (ENSCCRG00000037475)	smap1 (ENSCCRG00000077009)	SDHAF4 (ENSCCRG00000062363)	tlx1 (ENSCCRG00000062204)	ENSCCRG00000078379	ENSCCRG00000077372	slc2a15a (ENSCCRG00000034481)	fgf8a (ENSCCRG00000058573)	fbxw4 (ENSCCRG00000081048)	wbp1la (ENSCCRG00000008830) #16	borcs7 (ENSCCRG00000080250) #18	cnnm2a (ENSCCRG00000067197) #19	nt5c2a (ENSCCRG00000069262)	inaa (ENSCCRG00000008627) #22	pcgf6 (ENSCCRG00000008611) #21	polr1c (ENSCCRG00000078507)	ldb1a (ENSCCRG00000008367)	ENSCCRG00000081966	ENSCCRG00000008289	ENSCCRG00000008233	ly6pge (ENSCCRG00000019026)	unc5b (ENSCCRG00000011439)	ENSCCRG00000015313	ENSCCRG00000053860	ENSCCRG00000035335	ENSCCRG00000015207	chata (ENSCCRG00000050678)	slc18a3a (ENSCCRG00000050669)	lrit1a (ENSCCRG00000012663)
Cyprininae	ANCESTRAL SPECIES	159	ENSGT00950000183045.A.a.a.o	ENSGT00390000018730.B.c.a	ENSGT00940000159583.m	ENSGT00940000155884.a.f	ENSGT00390000009155.a	ENSGT00940000158698.i	ENSGT00940000164611.b.k.b	ENSGT00940000164095.a.b	ENSGT00940000159518.a.a	ENSGT00390000005029.e	ENSGT00950000183109.c.a.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849.j #18	ENSGT00940000159034.kb.b #19	ENSGT00940000163289.b.a.b.d	ENSGT00940000154418.a.a.a.b #22	ENSGT00940000158034.p #21	ENSGT00950000183100.B.a.b	ENSGT00390000005639.a.b.d.a.a	ENSGT00530000063586.a.f	ENSGT00390000001546.d	ENSGT00940000165188.a	ENSGT00940000157052.d	ENSGT00390000010398.A.d	ENSGT00950000182815.a.a.a.b.a	ENSGT00940000154741.c.b	ENSGT00390000003652.c.b.b	ENSGT00950000183125.b.a.b.c	ENSGT00390000002871	ENSGT01060000248556.A.b.a.a	ENSGT00940000159449.d.a
Cyprininae_a	ANCESTRAL SPECIES	101	ENSGT00950000183045.A.a.a.o	ENSGT00390000018730.B.c.a	ENSGT00940000159583.m	ENSGT00940000155884.a.f	ENSGT00390000009155.a	ENSGT00940000158698.i	ENSGT00940000164611.b.k.b	ENSGT00940000164095.a.b	ENSGT00940000159518.a.a	ENSGT00390000005029.e	ENSGT00950000183109.c.a.a.a.a.a #16	ENSGT00940000155588.b.a #17	ENSGT00390000015849.i.b #18	ENSGT00940000159034.kb.b #19	ENSGT00940000163289.b.a.b.d	ENSGT00940000154418.a.a.a.b #22	ENSGT00940000158034.p #21	ENSGT00950000183100.B.a.a	ENSGT00390000005639.a.b.d.a.a	ENSGT00530000063586.a.f	ENSGT00390000001546.d	ENSGT00940000165188.a	ENSGT00940000157052.d	ENSGT00390000010398.A.d	ENSGT00950000182815.a.a.a.b.a	ENSGT00940000154741.c.b	ENSGT00390000003652.c.b.b	ENSGT00950000183125.b.a.b.c	ENSGT00390000002871	ENSGT01060000248556.A.b.a.a	ENSGT00940000159449.d.a
Golden-line barbel	MODERN SPECIES	105	asrgl1 (ENSSGRG00000043220)	OGFRL1 (ENSSGRG00000043154)	b3gat2 (ENSSGRG00000043153)	smap1 (ENSSGRG00000043150)	SDHAF4 (ENSSGRG00000043149)	tlx1 (ENSSGRG00000043148)	ENSSGRG00000043147	slc2a15a (ENSSGRG00000043143)	fgf8a (ENSSGRG00000043139)	fbxw4 (ENSSGRG00000043135)	wbp1la (ENSSGRG00000043124) #16	cyp17a1 (ENSSGRG00000042981) #17	borcs7 (ENSSGRG00000042980) #18	cnnm2a (ENSSGRG00000042979) #19	nt5c2a (ENSSGRG00000042916)	inaa (ENSSGRG00000042911) #22	pcgf6 (ENSSGRG00000042910) #21	polr1c (ENSSGRG00000042884)	ldb1a (ENSSGRG00000042844)	ENSSGRG00000042842	ENSSGRG00000042841	nsmce4a (ENSSGRG00000042840)	ENSSGRG00000042839	ly6pge (ENSSGRG00000042837)	unc5b (ENSSGRG00000041650)	MYOF (ENSSGRG00000041365)	PARG (ENSSGRG00000041333)	OGDHL (ENSSGRG00000037474)	zgc:153142 (ENSSGRG00000037441)	chata (ENSSGRG00000037392)	rgra (ENSSGRG00000037371)
Common carp reference	MODERN SPECIES	48	asrgl1 (ENSCCRG00000070456)	OGFRL1 (ENSCCRG00000067169)	b3gat2 (ENSCCRG00000058439)	smap1 (ENSCCRG00000081017)	SDHAF4 (ENSCCRG00000064793)	tlx1 (ENSCCRG00000073948)	ENSCCRG00000069064	slc2a15a (ENSCCRG00000015324)	fgf8a (ENSCCRG00000010033)	fbxw4 (ENSCCRG00000010031)	wbp1la (ENSCCRG00000078206) #16	cyp17a1 (ENSCCRG00000010022) #17	borcs7 (ENSCCRG00000072536) #18	cnnm2a (ENSCCRG00000008778) #19	nt5c2a (ENSCCRG00000008908)	inaa (ENSCCRG00000010014) #22	pcgf6 (ENSCCRG00000035757) #21	polr1c (ENSCCRG00000035743)	ldb1a (ENSCCRG00000077621)	ENSCCRG00000008310	ENSCCRG00000008496	nsmce4a (ENSCCRG00000008254)	ENSCCRG00000055785	ly6pge (ENSCCRG00000008128)	ENSCCRG00000016412	unc5b (ENSCCRG00000015978)	ENSCCRG00000015101	OGDHL (ENSCCRG00000044715)	zgc:153142 (ENSCCRG00000015899)	chata (ENSCCRG00000015254)	slc18a3a (ENSCCRG00000015234)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	31	asrgl1 (ENSCARG00000068335)	OGFRL1 (ENSCARG00000068324)	b3gat2 (ENSCARG00000068307)	smap1 (ENSCARG00000068232)	SDHAF4 (ENSCARG00000068213)	tlx1 (ENSCARG00000068195)	ENSCARG00000068184	slc2a15a (ENSCARG00000068105)	fgf8a (ENSCARG00000068086)	fbxw4 (ENSCARG00000068064)	wbp1la (ENSCARG00000068059) #16	cyp17a1 (ENSCARG00000068007) #17	borcs7 (ENSCARG00000067993) #18	cnnm2a (ENSCARG00000067978) #19	nt5c2a (ENSCARG00000067337)	inaa (ENSCARG00000067223) #22	pcgf6 (ENSCARG00000067189) #21	polr1c (ENSCARG00000067130)	ENSCARG00000067119	ENSCARG00000067104	ENSCARG00000067069	snapc1b (ENSCARG00000067057)	SYT16 (ENSCARG00000067038)	SGPP1 (ENSCARG00000067030)	wdr89 (ENSCARG00000067020)	ppp2r5eb (ENSCARG00000066940)	KCNH5 (ENSCARG00000066795)	gphb5 (ENSCARG00000066764)	ENSCARG00000066653	ENSCARG00000066627	esr2b (ENSCARG00000066586)
Goldfish	MODERN SPECIES	31	bcl11aa (ENSCARG00000013441)	bag3 (ENSCARG00000013429)	tial1 (ENSCARG00000013382)	PKD2L1 (ENSCARG00000013302)	atoh7 (ENSCARG00000013299)	ENSCARG00000013295	SLC24A3 (ENSCARG00000013260)	RIN2 (ENSCARG00000013236)	slc17a5 (ENSCARG00000013199)	eef1a1a (ENSCARG00000013182)	CGAS (ENSCARG00000013172)	ddx43 (ENSCARG00000013125)	KCNQ5 (ENSCARG00000011671)	RIMS1 (ENSCARG00000010768)	asrgl1 (ENSCARG00000010677)	inaa (ENSCARG00000010665) #22	pcgf6 (ENSCARG00000010656) #21	polr1c (ENSCARG00000010548)	ldb1a (ENSCARG00000010138)	ENSCARG00000010091	ENSCARG00000010073	nsmce4a (ENSCARG00000010063)	ENSCARG00000010000	ly6pge (ENSCARG00000009982)	si:dkey-18j18.3 (ENSCARG00000009978)	rock2a (ENSCARG00000009893)	ENSCARG00000009866	sobpa (ENSCARG00000009853)	pdss2 (ENSCARG00000009847)	bend3 (ENSCARG00000009840)	mtres1 (ENSCARG00000009837)
Zebrafish	MODERN SPECIES	4	asrgl1 (ENSDARG00000021681)	ogfrl1 (ENSDARG00000061223)	b3gat2 (ENSDARG00000030733)	smap1 (ENSDARG00000031302)	sdhaf4 (ENSDARG00000039390)	tlx1 (ENSDARG00000003965)	lbx1a (ENSDARG00000018321)	slc2a15a (ENSDARG00000029894)	fgf8a (ENSDARG00000003399)	fbxw4 (ENSDARG00000033551)	wbp1la (ENSDARG00000013245) #16	cyp17a1 (ENSDARG00000033566) #17	borcs7 (ENSDARG00000055070) #18	cnnm2a (ENSDARG00000061195) #19	nt5c2a (ENSDARG00000039399)	inaa (ENSDARG00000011862) #22	pcgf6 (ENSDARG00000069681) #21	polr1c (ENSDARG00000039400)	ENSDARG00000095011	ldb1a (ENSDARG00000010137)	ENSDARG00000039406	nsmce4a (ENSDARG00000024311)	ENSDARG00000062790	ly6pge (ENSDARG00000098392)	unc5b (ENSDARG00000033327)	MYOF (ENSDARG00000017128)	PARG (ENSDARG00000061114)	OGDHL (ENSDARG00000079249)	C13H10orf53 (ENSDARG00000069363)	chata (ENSDARG00000015854)	slc18a3a (ENSDARG00000006356)
Characiphysae	ANCESTRAL SPECIES	13	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a	ENSGT00390000009155	ENSGT00940000158698	ENSGT00940000164611.b	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00950000183109.c.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00950000183100.B	ENSGT00390000005639.a.b.d.a	ENSGT00530000063586.a	ENSGT00390000001546	ENSGT00940000165188	ENSGT00940000157052	ENSGT00390000010398.A	ENSGT00950000182815.a.a.a.b	ENSGT00940000154741.c	ENSGT00390000003652.c.b	ENSGT00950000183125.b.a.b	ENSGT00390000002871	ENSGT01060000248556.A.b.a	ENSGT00940000159449.d
Characiphysae_b	ANCESTRAL SPECIES	10	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a	ENSGT00390000009155	ENSGT00940000158698	ENSGT00940000164611.b	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00950000183109.c.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00950000183100.B	ENSGT00390000005639.a.b.d.a	ENSGT00530000063586.a	ENSGT00390000001546	ENSGT00940000165188	ENSGT00940000157052	ENSGT00390000010398.A	ENSGT00950000182815.a.a.a.b	ENSGT00940000154741.c	ENSGT00390000003652.c.b	ENSGT00950000183125.b.a.b	ENSGT00390000002871	ENSGT01060000248556.A.b.a	ENSGT00940000159449.d
Characoidei	ANCESTRAL SPECIES	5	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a	ENSGT00390000009155	ENSGT00940000158698	ENSGT00940000164611.b	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00950000183109.c.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00950000183100.B	ENSGT00390000005639.a.b.d.a	ENSGT00530000063586.a	ENSGT00390000001546	ENSGT00940000165188	ENSGT00940000157052	ENSGT00390000010398.A	ENSGT00950000182815.a.a.a.b	ENSGT00940000154741.c	ENSGT00390000003652.c.b	ENSGT00950000183125.b.a.b	ENSGT00390000002871	ENSGT01060000248556.A.b.a	ENSGT00940000159449.d
Red-bellied piranha	MODERN SPECIES	10	asrgl1 (ENSPNAG00000008660)	OGFRL1 (ENSPNAG00000008651)	b3gat2 (ENSPNAG00000001132)	smap1 (ENSPNAG00000008623)	SDHAF4 (ENSPNAG00000001114)	tlx1 (ENSPNAG00000006029)	ENSPNAG00000001103	slc2a15a (ENSPNAG00000008571)	fgf8a (ENSPNAG00000008557)	fbxw4 (ENSPNAG00000001068)	wbp1la (ENSPNAG00000001064) #16	cyp17a1 (ENSPNAG00000007027) #17	borcs7 (ENSPNAG00000008503) #18	cnnm2a (ENSPNAG00000001058) #19	nt5c2a (ENSPNAG00000001046)	inaa (ENSPNAG00000008457) #22	pcgf6 (ENSPNAG00000001021) #21	polr1c (ENSPNAG00000008443)	ldb1a (ENSPNAG00000000981)	ENSPNAG00000000955	ENSPNAG00000000946	nsmce4a (ENSPNAG00000008367)	ENSPNAG00000000925	ENSPNAG00000008328	ly6pge (ENSPNAG00000000894)	unc5b (ENSPNAG00000008315)	MYOF (ENSPNAG00000005929)	PARG (ENSPNAG00000008246)	OGDHL (ENSPNAG00000008229)	zgc:153142 (ENSPNAG00000000771)	chata (ENSPNAG00000008191)
Mexicana tetra	MODERN SPECIES	17	asrgl1 (ENSAMXG00000037416)	OGFRL1 (ENSAMXG00000031531)	b3gat2 (ENSAMXG00000039282)	smap1 (ENSAMXG00000043334)	SDHAF4 (ENSAMXG00000035767)	tlx1 (ENSAMXG00000011990)	ENSAMXG00000033957	slc2a15a (ENSAMXG00000012007)	fgf8 (ENSAMXG00000034070)	fbxw4 (ENSAMXG00000033937)	wbp1la (ENSAMXG00000033725) #16	cyp17a1 (ENSAMXG00000012029) #17	borcs7 (ENSAMXG00000012036) #18	cnnm2a (ENSAMXG00000012039) #19	nt5c2a (ENSAMXG00000039026)	inaa (ENSAMXG00000012052) #22	pcgf6 (ENSAMXG00000012056) #21	polr1c (ENSAMXG00000012062)	ldb1a (ENSAMXG00000038752)	ENSAMXG00000012078	ENSAMXG00000037294	nsmce4a (ENSAMXG00000012091)	ENSAMXG00000035371	ly6pge (ENSAMXG00000012106)	unc5b (ENSAMXG00000038405)	MYOF (ENSAMXG00000012110)	PARG (ENSAMXG00000012116)	OGDHL (ENSAMXG00000012121)	zgc:153142 (ENSAMXG00000038291)	chata (ENSAMXG00000012130)	slc18a3a (ENSAMXG00000025615)
Clupeiformes	ANCESTRAL SPECIES	95	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a	ENSGT00390000009155	ENSGT00940000158698	ENSGT00940000164611.a.b	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00950000183109.c.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154615.i.a.b.i.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000155008.C	ENSGT00940000168119	ENSGT00940000162318	ENSGT00940000158644	ENSGT00940000159467	ENSGT00730000111274	ENSGT01070000253744.a.a.b.b	ENSGT00940000157889.g.a	ENSGT00390000015862	ENSGT00940000154025.b	ENSGT00390000002428.b	ENSGT00940000158352	ENSGT00390000011908	ENSGT01050000244838.C.b
Denticle herring	MODERN SPECIES	18	RIMS1 (ENSDCDG00000004537)	ENSDCDG00000004599	ENSDCDG00000004601	ENSDCDG00000004604	tlx1 (ENSDCDG00000004607)	lbx1b (ENSDCDG00000004608)	slc2a15a (ENSDCDG00000004629)	fgf8a (ENSDCDG00000004914)	fbxw4 (ENSDCDG00000004918)	wbp1la (ENSDCDG00000004933) #16	cyp17a1 (ENSDCDG00000004968) #17	borcs7 (ENSDCDG00000005644) #18	cnnm2a (ENSDCDG00000005649) #19	nt5c2a (ENSDCDG00000005828)	MFAP4 (ENSDCDG00000007459)	inaa (ENSDCDG00000007517) #22	pcgf6 (ENSDCDG00000007916) #21	ENSDCDG00000009450	ENSDCDG00000009466	bmp5 (ENSDCDG00000009487)	hmgcll1 (ENSDCDG00000009583)	hcrtr2 (ENSDCDG00000011683)	FAM83B (ENSDCDG00000011690)	ENSDCDG00000011701	lrrc1 (ENSDCDG00000011713)	ENSDCDG00000011723	gclc (ENSDCDG00000011735)	elovl5 (ENSDCDG00000011799)	fbxo9 (ENSDCDG00000011831)	CILK1 (ENSDCDG00000012712)	tmem14a (ENSDCDG00000012729)
Atlantic herring	MODERN SPECIES	4	OGFRL1 (ENSCHAG00000027739)	b3gat2 (ENSCHAG00000027738)	smap1 (ENSCHAG00000027736)	SDHAF4 (ENSCHAG00000027735)	tlx1 (ENSCHAG00000027734)	ENSCHAG00000027733	slc2a15a (ENSCHAG00000027732)	fgf8a (ENSCHAG00000027731)	fbxw4 (ENSCHAG00000027727)	wbp1la (ENSCHAG00000027726) #16	cyp17a1 (ENSCHAG00000027725) #17	borcs7 (ENSCHAG00000027723) #18	cnnm2a (ENSCHAG00000027722) #19	MFAP4 (ENSCHAG00000027720)	nt5c2a (ENSCHAG00000027716)	inaa (ENSCHAG00000027715) #22	pcgf6 (ENSCHAG00000027714) #21	DST (ENSCHAG00000018616)	ENSCHAG00000017852	COL21A1 (ENSCHAG00000017810)	bmp5 (ENSCHAG00000017736)	HMGCL (ENSCHAG00000017227)	ENSCHAG00000017196	hcrtr2 (ENSCHAG00000017187)	FAM83B (ENSCHAG00000017163)	ENSCHAG00000017155	lrrc1 (ENSCHAG00000016983)	klhl31 (ENSCHAG00000016928)	gclc (ENSCHAG00000016809)	elovl5 (ENSCHAG00000016788)	fbxo9 (ENSCHAG00000016462)
Euteleosteomorpha	ANCESTRAL SPECIES	89					ENSGT00810000125473.A	ENSGT00390000009155	ENSGT00940000158698	ENSGT00940000164611.a.b	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00950000183109.c.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.b #28	ENSGT00740000115593	ENSGT00940000167270	ENSGT00940000154865	ENSGT01000000215701	ENSGT00940000158120	ENSGT00940000156925.v	ENSGT00940000154518.b	ENSGT00940000155139	ENSGT00940000154551.b	ENSGT00950000182805.a.b	ENSGT00510000048167.a
Acanthomorphata	ANCESTRAL SPECIES	96				ENSGT00940000155078.a.b.a.b	ENSGT00810000125473.A	ENSGT00390000009155	ENSGT00940000158698	ENSGT00940000164611.a.b	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00950000183109.c.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.b #28	ENSGT00740000115593	ENSGT00860000134673	ENSGT00530000068411	ENSGT00940000167270	ENSGT00940000154865	ENSGT00940000158120	ENSGT00940000156925.v	ENSGT00940000154518.b	ENSGT00940000155139	ENSGT00940000154551.b	ENSGT00950000182805.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	51				ENSGT00940000155078.a.b.a.b	ENSGT00810000125473.A	ENSGT00390000009155	ENSGT00940000158698	ENSGT00940000164611.a.b	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00950000183109.c.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.b #28	ENSGT00740000115593	ENSGT00860000134673	ENSGT00530000068411	ENSGT00940000167270	ENSGT00940000154865	ENSGT00940000158120	ENSGT00940000156925.v	ENSGT00940000154518.b	ENSGT00940000155139	ENSGT00940000154551.b	ENSGT00950000182805.a.b
Percomorphaceae	ANCESTRAL SPECIES	30	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a	ENSGT00940000164218	ENSGT00940000167711.a.b	ENSGT00730000110943.B.c
Tiger tail seahorse	MODERN SPECIES	312	FAM98A (ENSHCOG00000000259)	RIN2 (ENSHCOG00000007704)	SLC24A3 (ENSHCOG00000007669)	ENSHCOG00000007647	CCDC85A (ENSHCOG00000007631)	ENSHCOG00000007576	fancl (ENSHCOG00000007556)	ENSHCOG00000007423	RIMS1 (ENSHCOG00000007388)	asrgl1 (ENSHCOG00000007178)	OGFRL1 (ENSHCOG00000007156)	b3gat2 (ENSHCOG00000007129)	smap1 (ENSHCOG00000007112)	slc1a4 (ENSHCOG00000007093)	sertad2b (ENSHCOG00000007074)	inaa (ENSHCOG00000007065) #22	pcgf6 (ENSHCOG00000007039) #21	ENSHCOG00000006964	XPO1 (ENSHCOG00000006949)	SANBR (ENSHCOG00000006910)	pex13 (ENSHCOG00000006878)	REL (ENSHCOG00000006855)	papolg (ENSHCOG00000006782)	lhb (ENSHCOG00000006769)	zfp36l2 (ENSHCOG00000006757)	ENSHCOG00000006725	PLEKHH2 (ENSHCOG00000006515)	epcam (ENSHCOG00000006442)	epcam (ENSHCOG00000006436)	ENSHCOG00000006422	ENSHCOG00000006399
Percomorphaceae_B	ANCESTRAL SPECIES	24	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00940000154865	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00990000204611	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Cyprinodontiformes	ANCESTRAL SPECIES	17	ENSGT00940000154865	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00990000204611	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y.q	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Cyprinodontoidei	ANCESTRAL SPECIES	14	ENSGT00980000198624	ENSGT00500000044903.a	ENSGT00500000044926	ENSGT00940000155447	ENSGT00390000004068	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y.q	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
NAME_4	ANCESTRAL SPECIES	156	ENSGT00980000198624	ENSGT00500000044903.a	ENSGT00500000044926	ENSGT00940000155447	ENSGT00390000004068	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y.q	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e
Mummichog	MODERN SPECIES	2342							ENSFHEG00000018409	ENSFHEG00000018587	RIMS1 (ENSFHEG00000018704)	asrgl1 (ENSFHEG00000018741)	OGFRL1 (ENSFHEG00000018769)	b3gat2 (ENSFHEG00000018781)	smap1 (ENSFHEG00000018796)	slc1a4 (ENSFHEG00000018816)	sertad2b (ENSFHEG00000018821)	INA (ENSFHEG00000018827) #22	pcgf6 (ENSFHEG00000018848) #21	ENSFHEG00000018887	ENSFHEG00000018933	XPO1 (ENSFHEG00000018974)	SANBR (ENSFHEG00000019053)	pex13 (ENSFHEG00000019069)	REL (ENSFHEG00000019074)	papolg (ENSFHEG00000019080)	haao (ENSFHEG00000019125)	ENSFHEG00000019141	ENSFHEG00000019164	ENSFHEG00000019166
Sheepshead minnow	MODERN SPECIES	152	ATE1 (ENSCVAG00000017540)	fgfr2 (ENSCVAG00000017413)	fgfr2 (ENSCVAG00000017367)	wdr11 (ENSCVAG00000017310)	vrk2 (ENSCVAG00000017131)	fancl (ENSCVAG00000017100)	ENSCVAG00000017083	RIMS1 (ENSCVAG00000000436)	ENSCVAG00000017010	asrgl1 (ENSCVAG00000016991)	OGFRL1 (ENSCVAG00000016978)	b3gat2 (ENSCVAG00000016951)	smap1 (ENSCVAG00000016930)	slc1a4 (ENSCVAG00000016917)	sertad2b (ENSCVAG00000016869)	INA (ENSCVAG00000016861) #22	pcgf6 (ENSCVAG00000016841) #21	ENSCVAG00000016826	XPO1 (ENSCVAG00000016788)	SANBR (ENSCVAG00000016699)	pex13 (ENSCVAG00000016636)	REL (ENSCVAG00000016622)	papolg (ENSCVAG00000016602)	haao (ENSCVAG00000016526)	ENSCVAG00000016492	ENSCVAG00000016487
Poeciliinae	ANCESTRAL SPECIES	16	ENSGT00500000044903.a	ENSGT00500000044926	ENSGT00940000155447	ENSGT00390000004068	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b.e	ENSGT00940000156983.a.b.f	ENSGT00940000155134.y.q	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Poecilia	ANCESTRAL SPECIES	11	ENSGT00980000198624	ENSGT00500000044903.a	ENSGT00500000044926	ENSGT00940000155447	ENSGT00390000004068	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b.e	ENSGT00940000155134.y.q	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00940000168731	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
NAME_6	ANCESTRAL SPECIES	79	ENSGT00980000198624	ENSGT00500000044903.a	ENSGT00500000044926	ENSGT00940000155447	ENSGT00390000004068	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b.e	ENSGT00940000155134.y.q	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00940000168731	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e
Amazon molly	MODERN SPECIES	656															sertad2b (ENSPFOG00000020903)	inaa (ENSPFOG00000013372) #22	pcgf6 (ENSPFOG00000013331) #21	ENSPFOG00000013327	XPO1 (ENSPFOG00000013233)	SANBR (ENSPFOG00000013110)	ENSPFOG00000013086	ENSPFOG00000013038	papolg (ENSPFOG00000012909)	haao (ENSPFOG00000012855)	ENSPFOG00000020902	ENSPFOG00000020901	zfp36l2 (ENSPFOG00000012844)
Sailfin molly	MODERN SPECIES	489															sertad2b (ENSPLAG00000018186)	inaa (ENSPLAG00000018208) #22	pcgf6 (ENSPLAG00000018219) #21	ENSPLAG00000018249	XPO1 (ENSPLAG00000018279)	SANBR (ENSPLAG00000018351)	ENSPLAG00000018381	REL (ENSPLAG00000018393)	papolg (ENSPLAG00000018445)	haao (ENSPLAG00000018481)	ENSPLAG00000018496	ENSPLAG00000018514
Guppy	MODERN SPECIES	445	ALDH18A1 (ENSPREG00000009186)	ATE1 (ENSPREG00000009249)	ENSPREG00000009433	fgfr2 (ENSPREG00000009500)	wdr11 (ENSPREG00000009578)	ENSPREG00000009718	fancl (ENSPREG00000009728)	ENSPREG00000009757	RIMS1 (ENSPREG00000009811)	asrgl1 (ENSPREG00000009974)	OGFRL1 (ENSPREG00000009987)	b3gat2 (ENSPREG00000010002)	smap1 (ENSPREG00000010031)	slc1a4 (ENSPREG00000010052)	sertad2b (ENSPREG00000010065)	INA (ENSPREG00000010072) #22	pcgf6 (ENSPREG00000010092) #21	ENSPREG00000010104	XPO1 (ENSPREG00000010135)	SANBR (ENSPREG00000010270)	ENSPREG00000010340	papolg (ENSPREG00000010358)	haao (ENSPREG00000010380)	ENSPREG00000010420	ENSPREG00000010440	zfp36l2 (ENSPREG00000010467)	ENSPREG00000010477	PLEKHH2 (ENSPREG00000010530)	epcam (ENSPREG00000010615)	ENSPREG00000010634	ENSPREG00000010681
Platyfish	MODERN SPECIES	14	ENSXMAG00000028786	ALDH18A1 (ENSXMAG00000007107)	ATE1 (ENSXMAG00000021121)	fgfr2 (ENSXMAG00000009512)	wdr11 (ENSXMAG00000007153)	ENSXMAG00000007201	fancl (ENSXMAG00000007223)	ENSXMAG00000007242	RIMS1 (ENSXMAG00000007246)	asrgl1 (ENSXMAG00000020852)	OGFRL1 (ENSXMAG00000007288)	b3gat2 (ENSXMAG00000007289)	smap1 (ENSXMAG00000007313)	slc1a4 (ENSXMAG00000007315)	sertad2b (ENSXMAG00000019825)	INA (ENSXMAG00000007342) #22	pcgf6 (ENSXMAG00000007347) #21	ENSXMAG00000007352	XPO1 (ENSXMAG00000007353)	SANBR (ENSXMAG00000007370)	pex13 (ENSXMAG00000007376)	REL (ENSXMAG00000007379)	papolg (ENSXMAG00000007383)	haao (ENSXMAG00000024497)	ENSXMAG00000019826	ENSXMAG00000021797	ENSXMAG00000023008	zfp36l2 (ENSXMAG00000024222)	ENSXMAG00000007422	PLEKHH2 (ENSXMAG00000007431)	epcam (ENSXMAG00000007455)
Oryzias	ANCESTRAL SPECIES	6	ENSGT00500000044929.d	ENSGT00940000155823.B	ENSGT00940000158843	ENSGT00940000154848.a.i.b	ENSGT00940000154848.a.i.a	ENSGT00530000063867.b	ENSGT00940000157081	ENSGT00940000155884.a.c	ENSGT00940000159583	ENSGT00390000018730.B	ENSGT00950000183045.A.a.a	ENSGT00940000155134.y	ENSGT00940000156983.a.b	ENSGT00390000005537	ENSGT00940000158042	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.b	ENSGT00940000167711.a.b
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00940000158843	ENSGT00940000154848.a.i.b.b	ENSGT00940000154848.a.i.b.a	ENSGT00940000154848.a.i.a	ENSGT01050000244840.A.a.a.h.b.f	ENSGT00530000063867.b	ENSGT00940000157081	ENSGT00940000155884.a.c	ENSGT00940000159583	ENSGT00390000018730.B	ENSGT00950000183045.A.a.a	ENSGT00940000155134.y	ENSGT00940000156983.a.b	ENSGT00390000005537	ENSGT00940000158042	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00940000168731	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e.c	ENSGT00990000203619.A.b.b.b.a.e.d	ENSGT00940000155076.b.b	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.b
Javanese ricefish	MODERN SPECIES	6	slc1a4 (ENSOJAG00000006577)	smap1 (ENSOJAG00000006545)	b3gat2 (ENSOJAG00000006491)	OGFRL1 (ENSOJAG00000006473)	asrgl1 (ENSOJAG00000006463)	RIMS1 (ENSOJAG00000006120)	ENSOJAG00000005991	ENSOJAG00000017511	fancl (ENSOJAG00000017446)	ENSOJAG00000017389	ENSOJAG00000017364	ENSOJAG00000017359	ENSOJAG00000017352	ENSOJAG00000017335	ENSOJAG00000017278	INA (ENSOJAG00000017264) #22	pcgf6 (ENSOJAG00000017249) #21	XPO1 (ENSOJAG00000016919)	SANBR (ENSOJAG00000016850)	ENSOJAG00000016840	REL (ENSOJAG00000016779)	papolg (ENSOJAG00000015154)	haao (ENSOJAG00000015008)	ENSOJAG00000014992	OXER1 (ENSOJAG00000014966)	OXER1 (ENSOJAG00000014957)	ENSOJAG00000014930	ENSOJAG00000014920	ENSOJAG00000014913	chrna1 (ENSOJAG00000014856)	ENSOJAG00000014837
Indian medaka	MODERN SPECIES	27	PLEKHH2 (ENSOMEG00000001287)	epcam (ENSOMEG00000001295)	ENSOMEG00000001298	ENSOMEG00000001300	calm2a (ENSOMEG00000001304)	TTC7A (ENSOMEG00000001309)	mcfd2 (ENSOMEG00000001314)	ENSOMEG00000001316	ENSOMEG00000001318	socs5b (ENSOMEG00000001322)	ENSOMEG00000001323	ENSOMEG00000001344	ENSOMEG00000001358	ENSOMEG00000001371	ENSOMEG00000000008	INA (ENSOMEG00000001378) #22	pcgf6 (ENSOMEG00000001379) #21	XPO1 (ENSOMEG00000001384)	SANBR (ENSOMEG00000001393)	ENSOMEG00000001395	ENSOMEG00000001401	papolg (ENSOMEG00000001406)	haao (ENSOMEG00000001413)	ENSOMEG00000001417	OXER1 (ENSOMEG00000001420)	OXER1 (ENSOMEG00000001422)	rhoq (ENSOMEG00000001428)	ENSOMEG00000001434	CRLS1 (ENSOMEG00000001438)	MCM8 (ENSOMEG00000001455)	ENSOMEG00000001464
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00940000158843	ENSGT00940000154848.a.i.b.d.b.a	ENSGT00940000154848.a.i.b.c.a	ENSGT00940000154848.a.i.b.d.a	ENSGT00940000154848.a.i.a	ENSGT00530000063867.b	ENSGT00940000157081	ENSGT00940000155884.a.c	ENSGT00940000159583	ENSGT00390000018730.B	ENSGT00950000183045.A.a.a	ENSGT00940000155134.y	ENSGT00940000156983.a.b	ENSGT00390000005537	ENSGT00940000158042	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e.f	ENSGT00990000203619.A.b.b.b.a.e.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Japanese Medaka HdrR	MODERN SPECIES	6	slc1a4 (ENSORLG00000020273)	smap1 (ENSORLG00000022419)	b3gat2 (ENSORLG00000020241)	ENSORLG00000028859	ENSORLG00000022420	OGFRL1 (ENSORLG00000020237)	asrgl1 (ENSORLG00000020232)	ENSORLG00000025163	RIMS1 (ENSORLG00000001748)	ENSORLG00000024560	ENSORLG00000001704	fancl (ENSORLG00000001695)	ENSORLG00000001676	ENSORLG00000028110	ENSORLG00000029181	ENSORLG00000001662 #22	pcgf6 (ENSORLG00000001649) #21	XPO1 (ENSORLG00000001642)	SANBR (ENSORLG00000001625)	pex13 (ENSORLG00000001597)	REL (ENSORLG00000001586)	papolg (ENSORLG00000001577)	haao (ENSORLG00000023483)	ENSORLG00000001535	ENSORLG00000023646	ENSORLG00000001530	zfp36l2 (ENSORLG00000022580)	thada (ENSORLG00000001515)	PLEKHH2 (ENSORLG00000001497)	ENSORLG00000001469	epcam (ENSORLG00000019684)
Chinese medaka	MODERN SPECIES	1122																INA (ENSOSIG00000014583) #22	pcgf6 (ENSOSIG00000014581) #21	XPO1 (ENSOSIG00000014516)	SANBR (ENSOSIG00000014510)	pex13 (ENSOSIG00000014509)	papolg (ENSOSIG00000013860)	haao (ENSOSIG00000013849)	ENSOSIG00000013847	OXER1 (ENSOSIG00000013845)	ENSOSIG00000013844	zfp36l2 (ENSOSIG00000013840)	ENSOSIG00000013836	PLEKHH2 (ENSOSIG00000013806)	ENSOSIG00000013802
Ovalentaria_B	ANCESTRAL SPECIES	25	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Cichlidae	ANCESTRAL SPECIES	13	ENSGT00940000170402.a	ENSGT00940000170402.b	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	16	ENSGT00940000160412.b	ENSGT00940000170402.a	ENSGT00940000170402.b	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11	ENSGT01100000263728	ENSGT00940000170402.a	ENSGT00940000170402.b	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Haplochromini	ANCESTRAL SPECIES	10	ENSGT01100000263728	ENSGT00940000170402.a	ENSGT00940000170402.b	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883.h	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT01030000234532.A.a.a.b.j.a	ENSGT01100000263728	ENSGT00940000170402.b	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883.h	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Haplochromini_B	ANCESTRAL SPECIES	59	ENSGT00940000160412.b	ENSGT00940000170402.b.a	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883.h	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245.m.a	ENSGT00940000167711.a.a
Zebra mbuna	MODERN SPECIES	1095	prph2b (ENSMZEG00005018317)	KCNG3 (ENSMZEG00005018314)	tspan14 (ENSMZEG00005018308)	ENSMZEG00005018270	ENSMZEG00005018253	ENSMZEG00005018240	ENSMZEG00005018235	ENSMZEG00005018229	RIMS1 (ENSMZEG00005018210)	asrgl1 (ENSMZEG00005018203)	OGFRL1 (ENSMZEG00005018195)	b3gat2 (ENSMZEG00005018189)	smap1 (ENSMZEG00005018180)	slc1a4 (ENSMZEG00005018175)	sertad2b (ENSMZEG00005018172)	inaa (ENSMZEG00005018170) #22	pcgf6 (ENSMZEG00005018168) #21	ENSMZEG00005018165	XPO1 (ENSMZEG00005018158)	ENSMZEG00005018155	SANBR (ENSMZEG00005018150)	pex13 (ENSMZEG00005018148)	rel (ENSMZEG00005018144)	papolg (ENSMZEG00005018140)	haao (ENSMZEG00005018135)	ENSMZEG00005018133	OXER1 (ENSMZEG00005018131)	zfp36l2 (ENSMZEG00005018129)	ENSMZEG00005018122	PLEKHH2 (ENSMZEG00005018115)	epcam (ENSMZEG00005018110)
Eastern happy	MODERN SPECIES	4	vrk2 (ENSACLG00000013876)	fancl (ENSACLG00000013907)	ENSACLG00000013967	ENSACLG00000014031	ENSACLG00000014048	ENSACLG00000014086	ENSACLG00000014137	RIMS1 (ENSACLG00000014225)	asrgl1 (ENSACLG00000014731)	ENSACLG00000014736	OGFRL1 (ENSACLG00000014776)	b3gat2 (ENSACLG00000014794)	smap1 (ENSACLG00000014878)	slc1a4 (ENSACLG00000014962)	sertad2b (ENSACLG00000015019)	inaa (ENSACLG00000015027) #22	pcgf6 (ENSACLG00000015043) #21	ENSACLG00000015079	XPO1 (ENSACLG00000015192)	SANBR (ENSACLG00000015345)	ENSACLG00000015401	pex13 (ENSACLG00000015531)	rel (ENSACLG00000015545)	papolg (ENSACLG00000015592)	haao (ENSACLG00000015648)	ENSACLG00000015704	ENSACLG00000015716	OXER1 (ENSACLG00000015728)	zfp36l2 (ENSACLG00000015842)	ENSACLG00000015898	PLEKHH2 (ENSACLG00000016220)
P. nyererei	MODERN SPECIES	357													ENSPNYG00000007204	slc1a4 (ENSPNYG00000007039)	sertad2b (ENSPNYG00000007002)	inaa (ENSPNYG00000006939) #22	pcgf6 (ENSPNYG00000006924) #21	ENSPNYG00000006899	XPO1 (ENSPNYG00000006874)	ENSPNYG00000006864	SANBR (ENSPNYG00000006825)	pex13 (ENSPNYG00000006810)	rel (ENSPNYG00000006794)	papolg (ENSPNYG00000006729)	haao (ENSPNYG00000006682)	ENSPNYG00000006661	ENSPNYG00000006643	ENSPNYG00000006628	ENSPNYG00000006552	PLEKHH2 (ENSPNYG00000006410)	epcam (ENSPNYG00000006385)
Burton s mouthbrooder	MODERN SPECIES	966													ENSHBUG00000019859	slc1a4 (ENSHBUG00000019865)	sertad2b (ENSHBUG00000019872)	inaa (ENSHBUG00000019881) #22	pcgf6 (ENSHBUG00000019886) #21	ENSHBUG00000019919	XPO1 (ENSHBUG00000020037)	ENSHBUG00000020067
Lyretail cichlid	MODERN SPECIES	500											OGFRL1 (ENSNBRG00000012441)	b3gat2 (ENSNBRG00000012409)	smap1 (ENSNBRG00000012380)	slc1a4 (ENSNBRG00000012369)	sertad2b (ENSNBRG00000012362)	INA (ENSNBRG00000012345) #22	pcgf6 (ENSNBRG00000012306) #21	ENSNBRG00000012289	XPO1 (ENSNBRG00000012229)	SANBR (ENSNBRG00000012188)	ENSNBRG00000012164	rel (ENSNBRG00000012053)	papolg (ENSNBRG00000011943)	haao (ENSNBRG00000011926)	ENSNBRG00000011916	ENSNBRG00000011905
Nile tilapia	MODERN SPECIES	4	zgc:175280 (ENSONIG00000002888)	ENSONIG00000040778	ENSONIG00000002892	fancl (ENSONIG00000002899)	ENSONIG00000034469	ENSONIG00000002908	ENSONIG00000042887	RIMS1 (ENSONIG00000002909)	asrgl1 (ENSONIG00000002924)	OGFRL1 (ENSONIG00000028484)	b3gat2 (ENSONIG00000002928)	smap1 (ENSONIG00000002934)	slc1a4 (ENSONIG00000002942)	sertad2b (ENSONIG00000028300)	ENSONIG00000036913	inaa (ENSONIG00000002959) #22	pcgf6 (ENSONIG00000038648) #21	ENSONIG00000029244	ENSONIG00000032208	ENSONIG00000034435	XPO1 (ENSONIG00000002969)	SANBR (ENSONIG00000002974)	ENSONIG00000027301	ENSONIG00000043103	pex13 (ENSONIG00000002982)	rel (ENSONIG00000002983)	papolg (ENSONIG00000002985)	haao (ENSONIG00000002993)	ENSONIG00000028207	OXER1 (ENSONIG00000002995)	zfp36l2 (ENSONIG00000042955)
Midas cichlid	MODERN SPECIES	1143			zgc:175280 (ENSACIG00000011654)	vrk2 (ENSACIG00000011635)	fancl (ENSACIG00000011528)	ENSACIG00000011509	ENSACIG00000011481	ENSACIG00000011416	RIMS1 (ENSACIG00000011360)	asrgl1 (ENSACIG00000011338)	OGFRL1 (ENSACIG00000011233)	b3gat2 (ENSACIG00000011215)	smap1 (ENSACIG00000011192)	slc1a4 (ENSACIG00000011034)	sertad2b (ENSACIG00000011011)	INA (ENSACIG00000010962) #22	pcgf6 (ENSACIG00000010931) #21	ENSACIG00000010916	ENSACIG00000010866	XPO1 (ENSACIG00000010818)	SANBR (ENSACIG00000010782)	ENSACIG00000010727	REL (ENSACIG00000010598)	papolg (ENSACIG00000010546)
Pomacentridae	ANCESTRAL SPECIES	36	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000164218
Pomacentridae_A	ANCESTRAL SPECIES	41	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000164218
Amphiprion	ANCESTRAL SPECIES	47	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00940000180563	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245
Orange clownfish	MODERN SPECIES	12	RIN2 (ENSAPEG00000008052)	SLC24A3 (ENSAPEG00000008025)	CCDC85A (ENSAPEG00000008004)	zgc:175280 (ENSAPEG00000007958)	vrk2 (ENSAPEG00000007944)	fancl (ENSAPEG00000007736)	ENSAPEG00000007654	ENSAPEG00000007547	RIMS1 (ENSAPEG00000007462)	asrgl1 (ENSAPEG00000007447)	OGFRL1 (ENSAPEG00000007402)	b3gat2 (ENSAPEG00000007371)	smap1 (ENSAPEG00000007307)	slc1a4 (ENSAPEG00000007270)	sertad2b (ENSAPEG00000007263)	INA (ENSAPEG00000007255) #22	pcgf6 (ENSAPEG00000007241) #21	ENSAPEG00000007162	XPO1 (ENSAPEG00000007038)	SANBR (ENSAPEG00000006991)	pex13 (ENSAPEG00000006970)	REL (ENSAPEG00000006957)	papolg (ENSAPEG00000006944)	haao (ENSAPEG00000006928)	ENSAPEG00000006917	ENSAPEG00000006897	zfp36l2 (ENSAPEG00000006879)	ENSAPEG00000006867	ENSAPEG00000006745	PLEKHH2 (ENSAPEG00000006640)	epcam (ENSAPEG00000006604)
Clown anemonefish	MODERN SPECIES	1436												b3gat2 (ENSAOCG00000009906)	smap1 (ENSAOCG00000009935)	slc1a4 (ENSAOCG00000009981)	sertad2b (ENSAOCG00000000609)	INA (ENSAOCG00000010008) #22	pcgf6 (ENSAOCG00000010019) #21	ENSAOCG00000010045	XPO1 (ENSAOCG00000010121)	SANBR (ENSAOCG00000010190)	pex13 (ENSAOCG00000010214)	REL (ENSAOCG00000010230)	papolg (ENSAOCG00000010254)	haao (ENSAOCG00000002723)	ENSAOCG00000010275	ENSAOCG00000010297
Spiny chromis	MODERN SPECIES	151														slc1a4 (ENSAPOG00000005172)	sertad2b (ENSAPOG00000005117)	INA (ENSAPOG00000005100) #22	pcgf6 (ENSAPOG00000005073) #21	ENSAPOG00000005039	XPO1 (ENSAPOG00000004984)	SANBR (ENSAPOG00000004895)	pex13 (ENSAPOG00000004860)	REL (ENSAPOG00000004836)	papolg (ENSAPOG00000004798)	haao (ENSAPOG00000004722)	ENSAPOG00000000117	ENSAPOG00000004660	zfp36l2 (ENSAPOG00000004647)	lrp12 (ENSAPOG00000004635)	utp23 (ENSAPOG00000004620)	utp23 (ENSAPOG00000004608)
Bicolor damselfish	MODERN SPECIES	311													ENSSPAG00000008515	slc1a4 (ENSSPAG00000008528)	sertad2b (ENSSPAG00000008557)	INA (ENSSPAG00000008580) #22	pcgf6 (ENSSPAG00000008671) #21	ENSSPAG00000008688	XPO1 (ENSSPAG00000008738)	SANBR (ENSSPAG00000008889)	pex13 (ENSSPAG00000008962)	REL (ENSSPAG00000008979)	papolg (ENSSPAG00000009004)	haao (ENSSPAG00000009062)	ENSSPAG00000009075	ENSSPAG00000009080	zfp36l2 (ENSSPAG00000009096)	ENSSPAG00000009108	PLEKHH2 (ENSSPAG00000009167)	epcam (ENSSPAG00000009236)	ENSSPAG00000009262
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Tetraodontidae	ANCESTRAL SPECIES	7	ENSGT00940000153566.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000160192	ENSGT00940000155850	ENSGT00390000003874.a.b	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000156754.a.a	ENSGT00610000086460	ENSGT00390000005203	ENSGT00940000155560.l	ENSGT00940000154711.a.a	ENSGT00940000155930
Fugu	MODERN SPECIES	16	ncapd3 (ENSTRUG00000001187)	SLC24A3 (ENSTRUG00000001777)	ENSTRUG00000020818	CCDC85A (ENSTRUG00000002280)	vrk2 (ENSTRUG00000002366)	fancl (ENSTRUG00000003132)	ENSTRUG00000026393	ENSTRUG00000003815	RIMS1 (ENSTRUG00000029275)	asrgl1 (ENSTRUG00000004945)	OGFRL1 (ENSTRUG00000005166)	b3gat2 (ENSTRUG00000005248)	smap1 (ENSTRUG00000030794)	slc1a4 (ENSTRUG00000005673)	sertad2b (ENSTRUG00000032160)	inaa (ENSTRUG00000006071) #22	pcgf6 (ENSTRUG00000021843) #21	ENSTRUG00000024851	ppp1r1c (ENSTRUG00000033045)	ENSTRUG00000020764	pdxkb (ENSTRUG00000021211)	ITSN1 (ENSTRUG00000006712)	cryzl1 (ENSTRUG00000024605)	setd4 (ENSTRUG00000024207)	cbr1 (ENSTRUG00000008145)	ENSTRUG00000032223	ENSTRUG00000032527	si:ch1073-126c3.2 (ENSTRUG00000020935)	ENSTRUG00000031491	GFRA1 (ENSTRUG00000002460)	ENSTRUG00000003406
Tetraodon	MODERN SPECIES	9	ENSTNIG00000013399	ncapd3 (ENSTNIG00000013400)	RIN2 (ENSTNIG00000013401)	SLC24A3 (ENSTNIG00000013402)	CCDC85A (ENSTNIG00000013403)	vrk2 (ENSTNIG00000013404)	fancl (ENSTNIG00000013405)	ENSTNIG00000005029	ENSTNIG00000004033	RIMS1 (ENSTNIG00000009888)	asrgl1 (ENSTNIG00000009887)	OGFRL1 (ENSTNIG00000009886)	b3gat2 (ENSTNIG00000009885)	smap1 (ENSTNIG00000009884)	slc1a4 (ENSTNIG00000009883)	inaa (ENSTNIG00000009882) #22	pcgf6 (ENSTNIG00000009881) #21	ENSTNIG00000009880	plekha3 (ENSTNIG00000009879)	pdxkb (ENSTNIG00000009878)	ITSN1 (ENSTNIG00000009877)	cryzl1 (ENSTNIG00000009876)	setd4 (ENSTNIG00000009875)	cbr1 (ENSTNIG00000009874)	ENSTNIG00000009873	ENSTNIG00000009872	si:ch1073-126c3.2 (ENSTNIG00000009871)	ENSTNIG00000009870	GFRA1 (ENSTNIG00000009869)	ENSTNIG00000009868	PRKCE (ENSTNIG00000009867)
Eupecaria_A	ANCESTRAL SPECIES	26	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Ballan wrasse	MODERN SPECIES	420													smap1 (ENSLBEG00000005457)	slc1a4 (ENSLBEG00000005485)	sertad2b (ENSLBEG00000005511)	INA (ENSLBEG00000005557) #22	pcgf6 (ENSLBEG00000005581) #21	ENSLBEG00000005679	XPO1 (ENSLBEG00000005740)	nanp (ENSLBEG00000005841)	cyp1b1 (ENSLBEG00000005851)	ENSLBEG00000005895	cdc42ep3 (ENSLBEG00000005949)
Eupecaria_B	ANCESTRAL SPECIES	26	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Perciformes	ANCESTRAL SPECIES	17	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Cottioidei	ANCESTRAL SPECIES	68										ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a	ENSGT00940000167711.a.b
Lumpfish	MODERN SPECIES	6	ENSCLMG00005005071	slc2a15a (ENSCLMG00005005070)	fgf8a (ENSCLMG00005005067)	fbxw4 (ENSCLMG00005005066)	wbp1la (ENSCLMG00005005063) #16	ENSCLMG00005005062	ENSCLMG00005005055	ENSCLMG00005005051	RIMS1 (ENSCLMG00005004792)	asrgl1 (ENSCLMG00005004693)	OGFRL1 (ENSCLMG00005004666)	b3gat2 (ENSCLMG00005004656)	ENSCLMG00005004647	slc1a4 (ENSCLMG00005004397)	sertad2b (ENSCLMG00005004355)	INA (ENSCLMG00005022572) #22	pcgf6 (ENSCLMG00005022564) #21	ENSCLMG00005022562	XPO1 (ENSCLMG00005022555)	ENSCLMG00005022546	pex13 (ENSCLMG00005022545)	ENSCLMG00005022542	papolg (ENSCLMG00005022200)	haao (ENSCLMG00005022184)	ENSCLMG00005022183	zfp36l2 (ENSCLMG00005022182)	ENSCLMG00005022178	PLEKHH2 (ENSCLMG00005022166)	epcam (ENSCLMG00005022164)	ENSCLMG00005022158	ENSCLMG00005022157
Stickleback	MODERN SPECIES	6	vox (ENSGACG00000002870)	ENSGACG00000002854	ENSGACG00000002851	ADGRA1 (ENSGACG00000002848)	ENSGACG00000002843	ENSGACG00000002838	ENSGACG00000002833	valopa (ENSGACG00000002828)	nkx6.2 (ENSGACG00000002824)	INPP5A (ENSGACG00000002820)	PWWP2B (ENSGACG00000002816)	ENSGACG00000002810	ENSGACG00000002807	STK32C (ENSGACG00000002804)	ENSGACG00000002791	inaa (ENSGACG00000002787) #22	pcgf6 (ENSGACG00000002779) #21	XPO1 (ENSGACG00000002743)	SANBR (ENSGACG00000002736)	pex13 (ENSGACG00000002732)	ENSGACG00000002730	papolg (ENSGACG00000002718)	haao (ENSGACG00000002666)	ENSGACG00000002665	ENSGACG00000002656	ENSGACG00000002649	epcam (ENSGACG00000002632)	NOP16 (ENSGACG00000002618)	ENSGACG00000002617	ENSGACG00000002616	ENSGACG00000002612
Perciformes_a	ANCESTRAL SPECIES	40																ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Pike perch	MODERN SPECIES	62	emx2 (ENSSLUG00000002572)	eif3s10 (ENSSLUG00000002603)	dennd10 (ENSSLUG00000002651)	sfxn4 (ENSSLUG00000002655) ##15	prdx3 (ENSSLUG00000002671)	tm9sf3 (ENSSLUG00000002739)	si:ch211-117n7.7 (ENSSLUG00000002884)	MOCOS (ENSSLUG00000002934)	zgc:110045 (ENSSLUG00000002981)	vwc2 (ENSSLUG00000003071)	ENSSLUG00000003128	ikzf1 (ENSSLUG00000003171)	fignl1 (ENSSLUG00000003392)	ttl (ENSSLUG00000003402)	ENSSLUG00000003414	inaa (ENSSLUG00000003433) #22	pcgf6 (ENSSLUG00000003502) #21	ENSSLUG00000003514	XPO1 (ENSSLUG00000003545)	SANBR (ENSSLUG00000003658)	pex13 (ENSSLUG00000003700)	REL (ENSSLUG00000003714)	papolg (ENSSLUG00000003953)	haao (ENSSLUG00000006811)	ENSSLUG00000006825	OXER1 (ENSSLUG00000006836)	OXER1 (ENSSLUG00000006838)	zfp36l2 (ENSSLUG00000006843)	ENSSLUG00000006857	PLEKHH2 (ENSSLUG00000006893)	epcam (ENSSLUG00000006926)
Channel bull blenny	MODERN SPECIES	6	ENSCGOG00000007819	ret (ENSCGOG00000007394)	csgalnact2 (ENSCGOG00000007371)	sec23ip (ENSCGOG00000007052)	mcmbp (ENSCGOG00000006647)	inpp5f (ENSCGOG00000006552)	bag3 (ENSCGOG00000006547)	tial1 (ENSCGOG00000005253)	PKD2L1 (ENSCGOG00000005209)	atoh7 (ENSCGOG00000005205)	MYPN (ENSCGOG00000005174)	CACUL1 (ENSCGOG00000005138)	ENSCGOG00000005090	dnajc12 (ENSCGOG00000005083)	ENSCGOG00000005052	inaa (ENSCGOG00000005000) #22	pcgf6 (ENSCGOG00000004987) #21	ENSCGOG00000004984	XPO1 (ENSCGOG00000004030)	SANBR (ENSCGOG00000003891)	pex13 (ENSCGOG00000003867)	papolg (ENSCGOG00000001797)	haao (ENSCGOG00000001630)	ENSCGOG00000001611	zfp36l2 (ENSCGOG00000001594)	ENSCGOG00000009930	PLEKHH2 (ENSCGOG00000009672)	epcam (ENSCGOG00000009655)	ENSCGOG00000009653	ENSCGOG00000009609	calm2a (ENSCGOG00000009161)
Eupecaria_C	ANCESTRAL SPECIES	28	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Gilthead seabream	MODERN SPECIES	6	ENSSAUG00010013859	ENSSAUG00010013857	CCDC85A (ENSSAUG00010013855)	vrk2 (ENSSAUG00010013851)	fancl (ENSSAUG00010013845)	ENSSAUG00010013844	ENSSAUG00010013841	RIMS1 (ENSSAUG00010011687)	asrgl1 (ENSSAUG00010011665)	OGFRL1 (ENSSAUG00010011664)	b3gat2 (ENSSAUG00010011663)	ENSSAUG00010011661	ENSSAUG00010011659	slc1a4 (ENSSAUG00010011624)	sertad2b (ENSSAUG00010011619)	INA (ENSSAUG00010011618) #22	pcgf6 (ENSSAUG00010011615) #21	ENSSAUG00010011613	XPO1 (ENSSAUG00010011605)	SANBR (ENSSAUG00010011590)	pex13 (ENSSAUG00010011589)	REL (ENSSAUG00010011587)	papolg (ENSSAUG00010009887)	haao (ENSSAUG00010009852)	ENSSAUG00010009849	OXER1 (ENSSAUG00010009848)	zfp36l2 (ENSSAUG00010009846)	ENSSAUG00010009782	PLEKHH2 (ENSSAUG00010009733)	epcam (ENSSAUG00010009722)	ENSSAUG00010009721
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	32	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Large yellow croaker	MODERN SPECIES	2	vrk2 (ENSLCRG00005005503)	fancl (ENSLCRG00005005508)	ENSLCRG00005005580	ENSLCRG00005005582	RIMS1 (ENSLCRG00005005586)	ENSLCRG00005005596	asrgl1 (ENSLCRG00005005652)	OGFRL1 (ENSLCRG00005005654)	b3gat2 (ENSLCRG00005005655)	smap1 (ENSLCRG00005005657)	slc1a4 (ENSLCRG00005005660)	ENSLCRG00005005662	sertad2b (ENSLCRG00005005663)	ENSLCRG00005005665	ENSLCRG00005005666	inaa (ENSLCRG00005005667) #22	pcgf6 (ENSLCRG00005005668) #21	ENSLCRG00005005670	XPO1 (ENSLCRG00005005671)	SANBR (ENSLCRG00005005684)	pex13 (ENSLCRG00005005699)	rel (ENSLCRG00005005704)	papolg (ENSLCRG00005005738)	haao (ENSLCRG00005008315)	ENSLCRG00005008319	ENSLCRG00005008321	ENSLCRG00005008322	ENSLCRG00005008323	zfp36l2 (ENSLCRG00005008324)	ENSLCRG00005008327	PLEKHH2 (ENSLCRG00005008334)
European seabass	MODERN SPECIES	1	ENSDLAG00005016917	ENSDLAG00005032765	ENSDLAG00005028747	ENSDLAG00005008569	ENSDLAG00005008524	ENSDLAG00005034298	ENSDLAG00005008400	ENSDLAG00005008395	RIMS1 (ENSDLAG00005004444)	asrgl1 (ENSDLAG00005004145)	OGFRL1 (ENSDLAG00005031770)	b3gat2 (ENSDLAG00005034533)	smap1 (ENSDLAG00005028051)	ENSDLAG00005004045	ENSDLAG00005027007	ENSDLAG00005034175 #22	ENSDLAG00005004006 #21	ENSDLAG00005029329	ENSDLAG00005034759	SANBR (ENSDLAG00005003788)	PEX13 (ENSDLAG00005003780)	REL (ENSDLAG00005003756)	PAPOLG (ENSDLAG00005001183)	ENSDLAG00005026402	ENSDLAG00005001110	ENSDLAG00005001107	ENSDLAG00005030644	ENSDLAG00005032916	ENSDLAG00005001092
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT01030000234610.b.a.b.b #28	ENSGT01030000234610.b.a.a #26	ENSGT00940000153566.b	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Climbing perch	MODERN SPECIES	6	ENSATEG00000008251 #26	ENSATEG00000008267	CCDC85A (ENSATEG00000008323)	ENSATEG00000008364	FANCL (ENSATEG00000008380)	ENSATEG00000025669	ENSATEG00000027192	ENSATEG00000008394	RIMS1 (ENSATEG00000008497)	asrgl1 (ENSATEG00000008570)	OGFRL1 (ENSATEG00000008583)	b3gat2 (ENSATEG00000008614)	smap1 (ENSATEG00000027185)	ENSATEG00000008668	ENSATEG00000008702	ENSATEG00000008716 #22	ENSATEG00000008747 #21	ENSATEG00000029313	XPO1 (ENSATEG00000008816)	SANBR (ENSATEG00000008937)	PEX13 (ENSATEG00000008975)	REL (ENSATEG00000008984)	PAPOLG (ENSATEG00000009007)	ENSATEG00000009086	ENSATEG00000009093	ENSATEG00000009101	ZFP36L2 (ENSATEG00000009119)	ENSATEG00000009131	PLEKHH2 (ENSATEG00000009267)	epcam (ENSATEG00000009305)	ENSATEG00000029611
Siamese fighting fish	MODERN SPECIES	6	fancl (ENSBSLG00000013238)	ENSBSLG00000013540	ENSBSLG00000013580	ENSBSLG00000013592	ENSBSLG00000013607	ENSBSLG00000013627	ENSBSLG00000014063	RIMS1 (ENSBSLG00000014248)	asrgl1 (ENSBSLG00000015893)	OGFRL1 (ENSBSLG00000015898)	b3gat2 (ENSBSLG00000015905)	smap1 (ENSBSLG00000016727)	ENSBSLG00000016900	slc1a4 (ENSBSLG00000016907)	sertad2b (ENSBSLG00000017013)	inaa (ENSBSLG00000017027) #22	pcgf6 (ENSBSLG00000017236) #21	ENSBSLG00000017271	XPO1 (ENSBSLG00000017320)	SANBR (ENSBSLG00000017756)	pex13 (ENSBSLG00000017825)	REL (ENSBSLG00000017839)	papolg (ENSBSLG00000017966)	haao (ENSBSLG00000019690)	ENSBSLG00000019699	ENSBSLG00000019702	zfp36l2 (ENSBSLG00000019709)	ENSBSLG00000019710	PLEKHH2 (ENSBSLG00000019739)	epcam (ENSBSLG00000020954)	ENSBSLG00000020987
Zig-zag eel	MODERN SPECIES	6	ENSMAMG00000010110	ENSMAMG00000010123	ENSMAMG00000010141	RIMS1 (ENSMAMG00000010155)	ENSMAMG00000010214	asrgl1 (ENSMAMG00000010317)	asrgl1 (ENSMAMG00000025178)	ENSMAMG00000010296	OGFRL1 (ENSMAMG00000010338)	b3gat2 (ENSMAMG00000010380)	ENSMAMG00000025551	ENSMAMG00000010392	ENSMAMG00000010434	ENSMAMG00000025714	ENSMAMG00000010458	ENSMAMG00000010489 #22	ENSMAMG00000026718 #21	ENSMAMG00000010542	XPO1 (ENSMAMG00000010568)	SANBR (ENSMAMG00000010631)	PEX13 (ENSMAMG00000010646)	REL (ENSMAMG00000010658)	PAPOLG (ENSMAMG00000010667)	HAAO (ENSMAMG00000025680)	ENSMAMG00000010776	ENSMAMG00000010788	ZFP36L2 (ENSMAMG00000024578)	ENSMAMG00000010805	PLEKHH2 (ENSMAMG00000010890)	epcam (ENSMAMG00000010904)	ENSMAMG00000010929
Carangaria	ANCESTRAL SPECIES	19	ENSGT01030000234610.b.a.a #26	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Pleuronectoidei	ANCESTRAL SPECIES	28	ENSGT00940000158120	ENSGT00940000167270	ENSGT00530000068411	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a	ENSGT00940000167711.a.b
Turbot	MODERN SPECIES	6	macroh2a2 (ENSSMAG00000016405)	ENSSMAG00000016337	CCDC85A (ENSSMAG00000031644)	ENSSMAG00000016222	FANCL (ENSSMAG00000016189)	ENSSMAG00000036317	ENSSMAG00000016172	RIMS1 (ENSSMAG00000016024)	asrgl1 (ENSSMAG00000016011)	OGFRL1 (ENSSMAG00000015991)	b3gat2 (ENSSMAG00000022064)	smap1 (ENSSMAG00000015928)	ENSSMAG00000030212	ENSSMAG00000015890	ENSSMAG00000025768	ENSSMAG00000015870 #22	ENSSMAG00000026367 #21	ENSSMAG00000015794	XPO1 (ENSSMAG00000015718)	SANBR (ENSSMAG00000015670)	PEX13 (ENSSMAG00000015649)	REL (ENSSMAG00000015627)	PAPOLG (ENSSMAG00000015598)	HAAO (ENSSMAG00000015579)	ENSSMAG00000033167	ZFP36L2 (ENSSMAG00000036742)	ENSSMAG00000015466	PLEKHH2 (ENSSMAG00000015414)	epcam (ENSSMAG00000015402)	ENSSMAG00000015375	ENSSMAG00000023870
Carangaria_A	ANCESTRAL SPECIES	31	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #28	ENSGT01030000234610.b.a.a #26	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000156467	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000161584	ENSGT00390000015500	ENSGT00940000157675	ENSGT00390000018245	ENSGT00940000167711.a.a
Barramundi perch	MODERN SPECIES	511															sertad2b (ENSLCAG00010001922)	inaa (ENSLCAG00010001916) #22	pcgf6 (ENSLCAG00010001908) #21	ENSLCAG00010001885	XPO1 (ENSLCAG00010001836)	SANBR (ENSLCAG00010001809)	pex13 (ENSLCAG00010001806)	REL (ENSLCAG00010001790)	papolg (ENSLCAG00010001158)	haao (ENSLCAG00010000997)	ENSLCAG00010000995	ENSLCAG00010000994
Seriola	ANCESTRAL SPECIES	14	ENSGT01030000234610.b.a.b.b #28	ENSGT01030000234610.b.a.a #26	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT00940000153408.B.s.a	ENSGT00390000008178	ENSGT00390000016883	ENSGT00940000158732	ENSGT00940000159378	ENSGT00940000159406	ENSGT00390000000403	ENSGT00940000153441.a.b	ENSGT00940000161556	ENSGT00940000157274	ENSGT00940000154962.B	ENSGT00940000159204	ENSGT00940000155996
Greater amberjack	MODERN SPECIES	30	calhm2.1 (ENSSDUG00000017039) #26	ncapd3 (ENSSDUG00000017066)	zgc:175280 (ENSSDUG00000017134)	ENSSDUG00000017182	vrk2 (ENSSDUG00000017194)	fancl (ENSSDUG00000017224)	ENSSDUG00000017276	ENSSDUG00000017290	RIMS1 (ENSSDUG00000017330)	asrgl1 (ENSSDUG00000017515)	OGFRL1 (ENSSDUG00000017527)	b3gat2 (ENSSDUG00000017562)	smap1 (ENSSDUG00000017573)	slc1a4 (ENSSDUG00000017597)	sertad2b (ENSSDUG00000017629)	INA (ENSSDUG00000017633) #22	pcgf6 (ENSSDUG00000017656) #21	ENSSDUG00000017676	XPO1 (ENSSDUG00000017709)	SANBR (ENSSDUG00000017782)	pex13 (ENSSDUG00000017851)	REL (ENSSDUG00000017861)	dnajc12 (ENSSDUG00000017884)	ENSSDUG00000017890	CACUL1 (ENSSDUG00000017907)	MYPN (ENSSDUG00000017929)	atoh7 (ENSSDUG00000017977)	PKD2L1 (ENSSDUG00000017986)	tial1 (ENSSDUG00000018021)	bag3 (ENSSDUG00000018058)	inpp5f (ENSSDUG00000018080)
Yellowtail amberjack	MODERN SPECIES	3109	ENSSLDG00000019024	ncapd3 (ENSSLDG00000019038)	zgc:175280 (ENSSLDG00000019070)	ENSSLDG00000019095	ENSSLDG00000019106	fancl (ENSSLDG00000019147)	ENSSLDG00000019191	RIMS1 (ENSSLDG00000019205)	asrgl1 (ENSSLDG00000019318)	OGFRL1 (ENSSLDG00000019346)	mibp2 (ENSSLDG00000019383)	b3gat2 (ENSSLDG00000019390)	smap1 (ENSSLDG00000019406)	slc1a4 (ENSSLDG00000019426)	sertad2b (ENSSLDG00000019457)	inaa (ENSSLDG00000019464) #22	pcgf6 (ENSSLDG00000019477) #21	ENSSLDG00000019493	XPO1 (ENSSLDG00000019530)	SANBR (ENSSLDG00000019651)	pex13 (ENSSLDG00000019689)	REL (ENSSLDG00000019718)	dnajc12 (ENSSLDG00000019879)	SIRT1 (ENSSLDG00000019885)	CACUL1 (ENSSLDG00000019914)	MYPN (ENSSLDG00000019939)	atoh7 (ENSSLDG00000019970)	PKD2L1 (ENSSLDG00000019979)	tial1 (ENSSLDG00000020001)	bag3 (ENSSLDG00000020035)	inpp5f (ENSSLDG00000020058)
Pinecone sodierfish	MODERN SPECIES	6	nt5c2a (ENSMMDG00005024586)	borcs7 (ENSMMDG00005024585) #18	cyp17a1 (ENSMMDG00005024584) #17	wbp1la (ENSMMDG00005024583) #16	fbxw4 (ENSMMDG00005024581)	fgf8a (ENSMMDG00005024579)	slc2a15a (ENSMMDG00005024578)	ENSMMDG00005024576	tlx1 (ENSMMDG00005024575)	ENSMMDG00005024574	cep68 (ENSMMDG00005024573)	pcgf5a (ENSMMDG00005024571)	ENSMMDG00005024569	ENSMMDG00005024566	ENSMMDG00005024565	inaa (ENSMMDG00005024563) #22	pcgf6 (ENSMMDG00005024561) #21	ENSMMDG00005024559	calhm2.1 (ENSMMDG00005024558) #26	CALHM3 (ENSMMDG00005024557) #28	hells (ENSMMDG00005024554)	ENSMMDG00005024553	ENSMMDG00005024552	ENSMMDG00005024551	ENSMMDG00005024550	macroh2a2 (ENSMMDG00005024548)	GBF1 (ENSMMDG00005024541)	pitx3 (ENSMMDG00005024535)	PNLIPRP2 (ENSMMDG00005024531)	hspa12a (ENSMMDG00005024516)	eno4 (ENSMMDG00005024508)
Cod	MODERN SPECIES	6	ENSGMOG00000016636	ENSGMOG00000016614	ENSGMOG00000016595	smndc1 (ENSGMOG00000016585)	ENSGMOG00000016547	ENSGMOG00000016509	ENSGMOG00000016469	ENSGMOG00000016447 ##29	SH3PXD2A (ENSGMOG00000026660) #30	slka (ENSGMOG00000016391) #33	ENSGMOG00000016289	sfr1 (ENSGMOG00000016280) #36	ENSGMOG00000016222 #37	ENSGMOG00000016203 #37	ENSGMOG00000016016	ENSGMOG00000012677 #22	ENSGMOG00000012670 #21	ENSGMOG00000026927	ENSGMOG00000036392	ENSGMOG00000017930 #26	ENSGMOG00000017916 #28	hells (ENSGMOG00000017884)	ENSGMOG00000031326	ENSGMOG00000033488	ENSGMOG00000025595	macroh2a2 (ENSGMOG00000007928)	ENSGMOG00000007931	pitx3 (ENSGMOG00000037230)	PNLIPRP2 (ENSGMOG00000007955)	hspa12a (ENSGMOG00000005300)	eno4 (ENSGMOG00000015450)
Protacanthopterygii	ANCESTRAL SPECIES	88	ENSGT01100000263502.B.a.a.d.a.a	ENSGT00950000183027.a.b.c.a	ENSGT00950000183054.b.d	ENSGT00940000155571.A	ENSGT00810000125473.A	ENSGT00390000009155	ENSGT00940000158698	ENSGT00940000164611.a.b	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00950000183109.c.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034 #21	ENSGT00940000166025.b	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.b #28	ENSGT00740000115593	ENSGT00940000167270	ENSGT00940000154865	ENSGT01000000215701	ENSGT00940000158120	ENSGT00940000156925.v	ENSGT00940000154518.b	ENSGT00940000155139	ENSGT00940000154551.b	ENSGT00950000182805.a.b	ENSGT00510000048167.a
Salmoninae	ANCESTRAL SPECIES	243		ENSGT00950000183027.a.b.c.a.b	ENSGT00950000183054.b.d.j	ENSGT00940000155078.a.b.a.b.g.a.b	ENSGT00810000125473.A.c	ENSGT00390000009155.d	ENSGT00940000158698.b.a	ENSGT00940000164611.a.b.a	ENSGT00940000164095.a	ENSGT00940000159518.a.d	ENSGT00390000005029.g	ENSGT00950000183109.c.a.a.a.a #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034.q #21	ENSGT00940000166025.b.b	ENSGT01030000234610.b.a.a #26	ENSGT00740000115593.c	ENSGT00940000167270.f	ENSGT00940000158302.d.a.j.b	ENSGT00940000158120.j	ENSGT00940000156925.v.k.b	ENSGT00940000154518.b.c	ENSGT00940000154551.b.l.b	ENSGT00510000048167.a	ENSGT00940000155068.a.b.c	ENSGT00940000161152.c	ENSGT01030000234606.a.a.a.b.i	ENSGT00700000104522.c
Salmoninae_a	ANCESTRAL SPECIES	11	ENSGT00940000163377.a.b.b.b	ENSGT00940000155571.A.g.a	ENSGT00950000183027.a.b.c.a.b	ENSGT00950000183054.b.d.j	ENSGT00940000155078.a.b.a.b.g.a.b	ENSGT00810000125473.A.c	ENSGT00390000009155.d	ENSGT00940000158698.b.a	ENSGT00940000164611.a.b.a	ENSGT00940000164095.a	ENSGT00940000159518.a.d	ENSGT00390000005029.g	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034.q #21	ENSGT00940000166025.b.b	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.b.d #28	ENSGT00740000115593.c	ENSGT00940000167270.f	ENSGT00940000154865.vb.b	ENSGT00940000158120.j	ENSGT00940000156925.v.k.b	ENSGT00940000154518.b.c	ENSGT00940000154551.b.l.b	ENSGT00510000048167.a	ENSGT00940000155068.a.b.c	ENSGT00940000161152.c	ENSGT01030000234606.a.a.a.b.i
Salmo	ANCESTRAL SPECIES	29	ENSGT00940000163377.a.b.b.b	ENSGT00940000155571.A.g.a	ENSGT00950000183027.a.b.c.a.b	ENSGT00950000183054.b.d.j	ENSGT00940000155078.a.b.a.b.g.a.b	ENSGT00810000125473.A.c	ENSGT00390000009155.d	ENSGT00940000158698.b.a	ENSGT00940000164611.a.b.a	ENSGT00940000164095.a	ENSGT00940000159518.a.d	ENSGT00390000005029.g	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034.q #21	ENSGT00940000166025.b.b	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.b.d #28	ENSGT00740000115593.c	ENSGT00940000167270.f	ENSGT00940000154865.vb.b	ENSGT00940000158120.j	ENSGT00940000156925.v.k.b	ENSGT00940000154518.b.c	ENSGT00940000154551.b.l.b	ENSGT00510000048167.a	ENSGT00940000155068.a.b.c	ENSGT00940000161152.c	ENSGT01030000234606.a.a.a.b.i
Atlantic salmon	MODERN SPECIES	9	ENSSSAG00000069529	usp54a (ENSSSAG00000069536)	myoz1a (ENSSSAG00000069550)	ENSSSAG00000069555	ENSSSAG00000069556	ENSSSAG00000069562	ENSSSAG00000069615	ENSSSAG00000069622	ENSSSAG00000069628	slc2a15a (ENSSSAG00000069641)	fgf8a (ENSSSAG00000098674)	fbxw4 (ENSSSAG00000069868)	cyp17a1 (ENSSSAG00000069890) #17	borcs7 (ENSSSAG00000119087) #18	nt5c2a (ENSSSAG00000069977)	inaa (ENSSSAG00000072742) #22	pcgf6 (ENSSSAG00000072746) #21	ENSSSAG00000101552 #26	ENSSSAG00000072757 #28	ENSSSAG00000072792	ENSSSAG00000085939	ENSSSAG00000074124	ENSSSAG00000074170	ENSSSAG00000074264	H2AW (ENSSSAG00000074192)	ENSSSAG00000075958	hspa12a (ENSSSAG00000001820)	shtn1 (ENSSSAG00000076009)	atp6v1ba (ENSSSAG00000076022)	vax1 (ENSSSAG00000101324)	pla2g4f (ENSSSAG00000076076)
River trout	MODERN SPECIES	35	usp54a (ENSSTUG00000007892)	myoz1a (ENSSTUG00000007881)	SYNPO2L (ENSSTUG00000007875)	ENSSTUG00000007860	ENSSTUG00000007786	cep68 (ENSSTUG00000007773)	ENSSTUG00000007767	tlx1 (ENSSTUG00000007752)	ENSSTUG00000007746	slc2a15a (ENSSTUG00000007570)	fgf8a (ENSSTUG00000007553)	fbxw4 (ENSSTUG00000007530)	cyp17a1 (ENSSTUG00000007509) #17	borcs7 (ENSSTUG00000007494) #18	nt5c2a (ENSSTUG00000006989)	inaa (ENSSTUG00000006947) #22	pcgf6 (ENSSTUG00000006916) #21	ENSSTUG00000006905	calhm2.1 (ENSSTUG00000006901) #26	CALHM3 (ENSSTUG00000006872) #28	hells (ENSSTUG00000005197)	ENSSTUG00000005002	ENSSTUG00000004984	macroh2a2 (ENSSTUG00000004938)	GBF1 (ENSSTUG00000004539)	pitx3 (ENSSTUG00000004502)	hspa12a (ENSSTUG00000004185)	shtn1 (ENSSTUG00000004139)	atp6v1ba (ENSSTUG00000003351)	vax1 (ENSSTUG00000003279)	ENSSTUG00000003218
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00940000163377.a.b.b.b	ENSGT00940000155571.A.g.a	ENSGT00950000183027.a.b.c.a.b	ENSGT00950000183054.b.d.j	ENSGT00940000155078.a.b.a.b.g.a.b	ENSGT00810000125473.A.c	ENSGT00390000009155.d	ENSGT00940000158698.b.a	ENSGT00940000164611.a.b.a	ENSGT00940000164095.a	ENSGT00940000159518.a.d	ENSGT00390000005029.g	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034.q #21	ENSGT00940000166025.b.b	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.b.d #28	ENSGT00740000115593.c	ENSGT00940000167270.f	ENSGT00940000158302.d.a.j.b	ENSGT00940000158120.j	ENSGT00940000156925.v.k.b	ENSGT00940000154518.b.c	ENSGT00940000154551.b.l.b	ENSGT00510000048167.a	ENSGT00940000155068.a.b.c	ENSGT00940000161152.c	ENSGT01030000234606.a.a.a.b.i
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00940000163377.a.b.b.b	ENSGT00940000155571.A.g.a	ENSGT00950000183027.a.b.c.a.b	ENSGT00950000183054.b.d.j	ENSGT00940000155078.a.b.a.b.g.a.b	ENSGT00810000125473.A.c	ENSGT00390000009155.d	ENSGT00940000158698.b.a	ENSGT00940000164611.a.b.a	ENSGT00940000164095.a	ENSGT00940000159518.a.d	ENSGT00390000005029.g	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.a #22	ENSGT00940000158034.q #21	ENSGT00940000166025.b.b	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.b.d #28	ENSGT00740000115593.c	ENSGT00940000167270.f	ENSGT00940000158120.j	ENSGT00940000156925.v.k.b	ENSGT00940000154518.b.c	ENSGT00940000154551.b.l.b	ENSGT00510000048167.a	ENSGT00940000155068.a.b.c	ENSGT00940000161152.c	ENSGT01030000234606.a.a.a.b.i	ENSGT00700000104522.c
Chinook salmon	MODERN SPECIES	30	ENSOTSG00005035203	usp54a (ENSOTSG00005035271)	myoz1a (ENSOTSG00005035341)	SYNPO2L (ENSOTSG00005035343)	ENSOTSG00005035345	cep68 (ENSOTSG00005035576)	ENSOTSG00005035578	tlx1 (ENSOTSG00005035580)	ENSOTSG00005035582	slc2a15a (ENSOTSG00005035584)	fgf8a (ENSOTSG00005035753)	fbxw4 (ENSOTSG00005035754)	cyp17a1 (ENSOTSG00005035756) #17	borcs7 (ENSOTSG00005035757) #18	nt5c2a (ENSOTSG00005035759)	inaa (ENSOTSG00005036210) #22	pcgf6 (ENSOTSG00005036212) #21	ENSOTSG00005036213	ENSOTSG00005036214	calhm2.1 (ENSOTSG00005036217) #26	hells (ENSOTSG00005036242)	ENSOTSG00005036262	macroh2a2 (ENSOTSG00005036265)	GBF1 (ENSOTSG00005036267)	pitx3 (ENSOTSG00005036400)	hspa12a (ENSOTSG00005036401)	shtn1 (ENSOTSG00005036449)	atp6v1ba (ENSOTSG00005036450)	vax1 (ENSOTSG00005000729)	ENSOTSG00005001025	kcnk18 (ENSOTSG00005001027)
Coho salmon	MODERN SPECIES	24	ENSOKIG00005007463	usp54a (ENSOKIG00005007541)	myoz1a (ENSOKIG00005007586)	SYNPO2L (ENSOKIG00005007597)	ENSOKIG00005007623	cep68 (ENSOKIG00005007798)	ENSOKIG00005007807	tlx1 (ENSOKIG00005007814)	ENSOKIG00005007829	slc2a15a (ENSOKIG00005007891)	fgf8a (ENSOKIG00005008657)	fbxw4 (ENSOKIG00005008688)	cyp17a1 (ENSOKIG00005008708) #17	borcs7 (ENSOKIG00005008726) #18	nt5c2a (ENSOKIG00005008775)	inaa (ENSOKIG00005009179) #22	pcgf6 (ENSOKIG00005009188) #21	ENSOKIG00005009221	calhm2.1 (ENSOKIG00005009238) #26	ENSOKIG00005009251 #28	hells (ENSOKIG00005009326)	ENSOKIG00005009572	ENSOKIG00005009632	ENSOKIG00005009641	macroh2a2 (ENSOKIG00005009648)	GBF1 (ENSOKIG00005009693)	pitx3 (ENSOKIG00005009765)	hspa12a (ENSOKIG00005009791)	shtn1 (ENSOKIG00005009885)	atp6v1ba (ENSOKIG00005010025)	vax1 (ENSOKIG00005011277)
Rainbow trout	MODERN SPECIES		usp54a (ENSOMYG00000003214)	ENSOMYG00000051133	myoz1a (ENSOMYG00000003276)	ENSOMYG00000003305	ENSOMYG00000003446	ENSOMYG00000003583	ENSOMYG00000003606	tlx1 (ENSOMYG00000003624)	ENSOMYG00000003660	slc2a15a (ENSOMYG00000003788)	fgf8a (ENSOMYG00000060026)	fbxw4 (ENSOMYG00000003974)	cyp17a1 (ENSOMYG00000004006) #17	borcs7 (ENSOMYG00000004037) #18	nt5c2a (ENSOMYG00000004691)	inaa (ENSOMYG00000005199) #22	pcgf6 (ENSOMYG00000005228) #21	ENSOMYG00000005272	ENSOMYG00000005291 #26	ENSOMYG00000005308	hells (ENSOMYG00000005852)	ENSOMYG00000006563	ENSOMYG00000073245	macroh2a2 (ENSOMYG00000006631)	ENSOMYG00000007886	pitx3 (ENSOMYG00000009122)	hspa12a (ENSOMYG00000009142)	shtn1 (ENSOMYG00000009169)	atp6v1ba (ENSOMYG00000009477)	vax1 (ENSOMYG00000065891)	ENSOMYG00000010089
Huchen	MODERN SPECIES	245		myoz1a (ENSHHUG00000049085)	SYNPO2L (ENSHHUG00000049075)	ENSHHUG00000048912	cep68 (ENSHHUG00000048907)	ENSHHUG00000048904	tlx1 (ENSHHUG00000048896)	ENSHHUG00000048893	slc2a15a (ENSHHUG00000048880)	fgf8a (ENSHHUG00000048858)	fbxw4 (ENSHHUG00000048838)	ENSHHUG00000048835 #16	cyp17a1 (ENSHHUG00000048782) #17	borcs7 (ENSHHUG00000048776) #18	nt5c2a (ENSHHUG00000048746)	inaa (ENSHHUG00000048740) #22	pcgf6 (ENSHHUG00000048735) #21	ENSHHUG00000048723	calhm2.1 (ENSHHUG00000048720) #26	hells (ENSHHUG00000048559)	ENSHHUG00000048503	ENSHHUG00000048493	macroh2a2 (ENSHHUG00000048480)	ENSHHUG00000048452	pitx3 (ENSHHUG00000048444)	hspa12a (ENSHHUG00000048417)	shtn1 (ENSHHUG00000048402)	atp6v1ba (ENSHHUG00000048354)	vax1 (ENSHHUG00000048353)	ENSHHUG00000048341	kcnk18 (ENSHHUG00000048340)
Northern pike	MODERN SPECIES	5	SYNPO2L (ENSELUG00000015472)	zgc:153169 (ENSELUG00000015448)	ENSELUG00000015413	cep68 (ENSELUG00000015396)	ENSELUG00000024705	tlx1 (ENSELUG00000015373)	ENSELUG00000015360	slc2a15a (ENSELUG00000000563)	fgf8a (ENSELUG00000015308)	fbxw4 (ENSELUG00000015291)	cyp17a1 (ENSELUG00000014836) #17	ENSELUG00000015261 #17	ENSELUG00000001250 #17	borcs7 (ENSELUG00000015228) #18	nt5c2a (ENSELUG00000015147)	inaa (ENSELUG00000015029) #22	pcgf6 (ENSELUG00000015010) #21	ENSELUG00000014991	calhm2.1 (ENSELUG00000014966) #26	CALHM3 (ENSELUG00000014947) #28	hells (ENSELUG00000014909)	ENSELUG00000014562	ENSELUG00000025259	macroh2a2 (ENSELUG00000014527)	GBF1 (ENSELUG00000014474)	pitx3 (ENSELUG00000014303)	PNLIPRP2 (ENSELUG00000014287)	hspa12a (ENSELUG00000014254)	eno4 (ENSELUG00000014183)	shtn1 (ENSELUG00000001085)	atp6v1ba (ENSELUG00000014059)
Clupeocephala	ANCESTRAL SPECIES	209	ENSGT00390000006916.c	ENSGT00940000153431.b	ENSGT01030000234532.A.a.a.b.j.b	ENSGT00940000154866.B.b	ENSGT00390000006243	ENSGT00940000164611.b	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT00940000166025.b	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00940000163896	ENSGT00530000064714 #37	ENSGT00390000018550 #36	ENSGT00940000168136	ENSGT00940000156184.b #33
Euteleosteomorpha	ANCESTRAL SPECIES	95	ENSGT01030000234532.A.a.a.b.j.b	ENSGT00940000154866.B.b	ENSGT00940000155933.b.b	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.b	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Acanthomorphata	ANCESTRAL SPECIES	44					ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000163289.b.b	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	3	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Percomorphaceae	ANCESTRAL SPECIES	20	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Eupercaria	ANCESTRAL SPECIES	2	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Eupecaria_A	ANCESTRAL SPECIES	3	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a
Ballan wrasse	MODERN SPECIES	186	krt98 (ENSLBEG00000009274)	krt15 (ENSLBEG00000009308)	krt98 (ENSLBEG00000009343)	krt94 (ENSLBEG00000009359)	SMAP1 (ENSLBEG00000009408)	cenpk (ENSLBEG00000009428)	lbx1b (ENSLBEG00000009451)	slc2a15b (ENSLBEG00000009474)	fgf8b (ENSLBEG00000009512)	dpcd (ENSLBEG00000009557)	poll (ENSLBEG00000009587)	wbp1lb (ENSLBEG00000009633) #16	as3mt (ENSLBEG00000009674)	CNNM2 (ENSLBEG00000009710) #19	nt5c2b (ENSLBEG00000009773)	inab (ENSLBEG00000009843) #22	taf5 (ENSLBEG00000009877) #23	atp5md (ENSLBEG00000009925)	ENSLBEG00000009990 #25	zgc:175214 (ENSLBEG00000010140)	CALHM1 (ENSLBEG00000010161) #27	ENSLBEG00000010182	rab40c (ENSLBEG00000010218)	wfikkn1 (ENSLBEG00000010249)	mettl26 (ENSLBEG00000010279)	ENSLBEG00000010321	ENSLBEG00000010431	ENSLBEG00000010511	ENSLBEG00000010565	bcl11ab (ENSLBEG00000010596)	ccdc85al (ENSLBEG00000010619)
Eupecaria_B	ANCESTRAL SPECIES	1	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a
Eupecaria_C	ANCESTRAL SPECIES	22	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	21	ENSGT00400000024592	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a
European seabass	MODERN SPECIES	20	ENSDLAG00005024684	ENSDLAG00005024681	krt99 (ENSDLAG00005024665)	krt15 (ENSDLAG00005024650)	krt98 (ENSDLAG00005029695)	krt94 (ENSDLAG00005024613)	ENSDLAG00005024602	lbx1b (ENSDLAG00005026330)	slc2a15b (ENSDLAG00005024529)	fgf8b (ENSDLAG00005034123)	dpcd (ENSDLAG00005024508)	poll (ENSDLAG00005024503)	wbp1lb (ENSDLAG00005024495) #16	ENSDLAG00005024481 #19	nt5c2b (ENSDLAG00005024147)	inab (ENSDLAG00005031136) #22	ENSDLAG00005024092	zgc:175214 (ENSDLAG00005024067)	pdcd11 (ENSDLAG00005024070) #25	ENSDLAG00005024065 #27	ENSDLAG00005033739	zp3c (ENSDLAG00005024061)	ENSDLAG00005032709	ENSDLAG00005033770	ENSDLAG00005023583	ENSDLAG00005023542	ENSDLAG00005023539	ENSDLAG00005034174	ENSDLAG00005023533	bcl11ab (ENSDLAG00005028530)	sec23b (ENSDLAG00005023492)
Large yellow croaker	MODERN SPECIES	481	ENSLCRG00005003767	krt99 (ENSLCRG00005003768)	krt98 (ENSLCRG00005003770)	krt15 (ENSLCRG00005003773)	krt94 (ENSLCRG00005003776)	SMAP1 (ENSLCRG00005003780)	lbx1b (ENSLCRG00005003783)	slc2a15b (ENSLCRG00005003787)	fgf8b (ENSLCRG00005003796)	dpcd (ENSLCRG00005003799)	poll (ENSLCRG00005003801)	wbp1lb (ENSLCRG00005003802) #16	as3mt (ENSLCRG00005003804)	CNNM2 (ENSLCRG00005003820) #19	nt5c2b (ENSLCRG00005003843)	inab (ENSLCRG00005005315) #22	taf5 (ENSLCRG00005005317) #23	atp5md (ENSLCRG00005005378)	pdcd11 (ENSLCRG00005005379) #25	zgc:175214 (ENSLCRG00005005387)	CALHM1 (ENSLCRG00005005389) #27	ITPRIP (ENSLCRG00005005392)	zp3c (ENSLCRG00005005400)	rab40c (ENSLCRG00005005404)	wfikkn1 (ENSLCRG00005005406)	ENSLCRG00005005413	ENSLCRG00005005459	ENSLCRG00005005465	ENSLCRG00005005463	bcl11ab (ENSLCRG00005005467)	ccdc85al (ENSLCRG00005005468)
Gilthead seabream	MODERN SPECIES		ENSSAUG00010002849	krt99 (ENSSAUG00010002863)	krt15 (ENSSAUG00010002881)	krt98 (ENSSAUG00010002917)	SMAP1 (ENSSAUG00010003003)	cenpk (ENSSAUG00010003014)	lbx1b (ENSSAUG00010003024)	slc2a15b (ENSSAUG00010003054)	fgf8b (ENSSAUG00010003246)	dpcd (ENSSAUG00010003248)	poll (ENSSAUG00010003250)	wbp1lb (ENSSAUG00010003253) #16	as3mt (ENSSAUG00010003260)	CNNM2 (ENSSAUG00010003267) #19	nt5c2b (ENSSAUG00010003314)	inab (ENSSAUG00010005042) #22	taf5 (ENSSAUG00010005046) #23	atp5md (ENSSAUG00010005272)	pdcd11 (ENSSAUG00010005292) #25	zgc:175214 (ENSSAUG00010005365)	ITPRIP (ENSSAUG00010005369)	CALHM1 (ENSSAUG00010005371) #27	ENSSAUG00010005374	rab40c (ENSSAUG00010005377)	wfikkn1 (ENSSAUG00010005380)	ENSSAUG00010005426	ENSSAUG00010006230	bcl11ab (ENSSAUG00010006232)	ccdc85al (ENSSAUG00010006234)	sec23b (ENSSAUG00010003354)	gsg1l (ENSSAUG00010003387)
Perciformes	ANCESTRAL SPECIES	2	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a
Cottioidei	ANCESTRAL SPECIES	3	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a	ENSGT00390000006916.c
Lumpfish	MODERN SPECIES		krt15 (ENSCLMG00005016364)	krt15 (ENSCLMG00005016371)	krt98 (ENSCLMG00005016373)	krt94 (ENSCLMG00005016389)	SMAP1 (ENSCLMG00005000004)	cenpk (ENSCLMG00005000017)	lbx1b (ENSCLMG00005000027)	slc2a15b (ENSCLMG00005000030)	fgf8b (ENSCLMG00005000044)	dpcd (ENSCLMG00005000050)	poll (ENSCLMG00005000053)	wbp1lb (ENSCLMG00005000058) #16	as3mt (ENSCLMG00005000078)	CNNM2 (ENSCLMG00005000165) #19	nt5c2b (ENSCLMG00005000335)	inab (ENSCLMG00005000727) #22	taf5 (ENSCLMG00005000736) #23	atp5md (ENSCLMG00005000778)	pdcd11 (ENSCLMG00005000779) #25	zgc:175214 (ENSCLMG00005000782)	CALHM1 (ENSCLMG00005000783) #27	ENSCLMG00005000784	rab40c (ENSCLMG00005000785)	wfikkn1 (ENSCLMG00005000786)	mettl26 (ENSCLMG00005000787)	ENSCLMG00005000788	ENSCLMG00005000790	ENSCLMG00005000792	ENSCLMG00005000821	ENSCLMG00005000825	ENSCLMG00005000828
Stickleback	MODERN SPECIES	4	krt15 (ENSGACG00000018310)	krt98 (ENSGACG00000018303)	krt94 (ENSGACG00000018299)	SMAP1 (ENSGACG00000018297)	cenpk (ENSGACG00000018295)	lbx1b (ENSGACG00000018293)	slc2a15b (ENSGACG00000018278)	fgf8b (ENSGACG00000018276)	dpcd (ENSGACG00000018274)	poll (ENSGACG00000018272)	wbp1lb (ENSGACG00000018270) #16	as3mt (ENSGACG00000018262)	CNNM2 (ENSGACG00000018261) #19	ENSGACG00000018260	nt5c2b (ENSGACG00000018247)	inab (ENSGACG00000018244) #22	taf5 (ENSGACG00000018238) #23	pdcd11 (ENSGACG00000018233) #25	ENSGACG00000018230	SMURF2 (ENSGACG00000018228)	ENSGACG00000018226	ENSGACG00000018225	TEX2 (ENSGACG00000018223)	ccdc40 (ENSGACG00000018222)	ENSGACG00000018220	CBX4 (ENSGACG00000018219)	cbx8b (ENSGACG00000018216)	si:dkey-31g6.6 (ENSGACG00000018215)	dgke (ENSGACG00000018212)	trim25 (ENSGACG00000018210)	trim25 (ENSGACG00000018208)
Perciformes_a	ANCESTRAL SPECIES		ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Channel bull blenny	MODERN SPECIES		krt99 (ENSCGOG00000007820)	krt15 (ENSCGOG00000007877)	krt98 (ENSCGOG00000007897)	krt94 (ENSCGOG00000007899)	SMAP1 (ENSCGOG00000007902)	cenpk (ENSCGOG00000007910)	lbx1b (ENSCGOG00000007915)	slc2a15b (ENSCGOG00000007928)	fgf8b (ENSCGOG00000008193)	dpcd (ENSCGOG00000008201)	poll (ENSCGOG00000008203)	wbp1lb (ENSCGOG00000008213) #16	as3mt (ENSCGOG00000008221)	CNNM2 (ENSCGOG00000008265) #19	nt5c2b (ENSCGOG00000008287)	inab (ENSCGOG00000008659) #22	taf5 (ENSCGOG00000008661) #23	atp5md (ENSCGOG00000008688)	pdcd11 (ENSCGOG00000000129) #25	zgc:175214 (ENSCGOG00000000156)	CALHM1 (ENSCGOG00000000163) #27	ITPRIP (ENSCGOG00000000168)	zp3c (ENSCGOG00000000180)	rab40c (ENSCGOG00000000192)	wfikkn1 (ENSCGOG00000000229)	mettl26 (ENSCGOG00000000234)	ENSCGOG00000000280	ENSCGOG00000000366	ENSCGOG00000000370	bcl11ab (ENSCGOG00000000379)	ccdc85al (ENSCGOG00000000393)
Pike perch	MODERN SPECIES	8	krt98 (ENSSLUG00000009937)	ENSSLUG00000009915	krt98 (ENSSLUG00000009869)	krt94 (ENSSLUG00000009847)	SMAP1 (ENSSLUG00000009833)	cenpk (ENSSLUG00000009823)	lbx1b (ENSSLUG00000009812)	slc2a15b (ENSSLUG00000009795)	fgf8b (ENSSLUG00000009782)	dpcd (ENSSLUG00000009777)	poll (ENSSLUG00000009770)	wbp1lb (ENSSLUG00000009766) #16	as3mt (ENSSLUG00000009747)	CNNM2 (ENSSLUG00000009525) #19	nt5c2b (ENSSLUG00000008262)	inab (ENSSLUG00000008179) #22	taf5 (ENSSLUG00000007908) #23	atp5md (ENSSLUG00000007888)	pdcd11 (ENSSLUG00000007813) #25	zgc:175214 (ENSSLUG00000007794)	CALHM1 (ENSSLUG00000007787) #27	ENSSLUG00000007773	zp3c (ENSSLUG00000007761)	rab40c (ENSSLUG00000007753)	wfikkn1 (ENSSLUG00000007741)	ENSSLUG00000006994	ENSSLUG00000006919	ENSSLUG00000006902	ENSSLUG00000006895	bcl11ab (ENSSLUG00000006832)	ccdc85al (ENSSLUG00000006822)
Tetraodontidae	ANCESTRAL SPECIES	16	ENSGT00950000183012.B.b	ENSGT00390000009084	ENSGT01050000244823.d.b.a.a	ENSGT00940000155258.e	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01060000250262	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a
Tetraodon	MODERN SPECIES	10	ENSTNIG00000019365	KRT19 (ENSTNIG00000019366)	ENSTNIG00000001746	SMAP1 (ENSTNIG00000019367)	cenpk (ENSTNIG00000000157)	lbx1b (ENSTNIG00000019368)	slc2a15b (ENSTNIG00000019369)	dpcd (ENSTNIG00000012092)	poll (ENSTNIG00000012091)	wbp1lb (ENSTNIG00000012090) #16	as3mt (ENSTNIG00000000132)	as3mt (ENSTNIG00000001399)	CNNM2 (ENSTNIG00000012089) #19	ENSTNIG00000001542 #19	nt5c2b (ENSTNIG00000012088)	inab (ENSTNIG00000012087) #22	taf5 (ENSTNIG00000012086) #23	pdcd11 (ENSTNIG00000012085) #25	CALHM1 (ENSTNIG00000012084) #27	ENSTNIG00000012083	rab40c (ENSTNIG00000012082)	wfikkn1 (ENSTNIG00000012081)	mettl26 (ENSTNIG00000012080)	ENSTNIG00000012079	ENSTNIG00000012078	ENSTNIG00000012077	bcl11ab (ENSTNIG00000012076)	ccdc85al (ENSTNIG00000012075)	sec23b (ENSTNIG00000012074)	gsg1l (ENSTNIG00000012073)	ENSTNIG00000002021
Fugu	MODERN SPECIES	8	ENSTRUG00000015253	krt94 (ENSTRUG00000015114)	SMAP1 (ENSTRUG00000015069)	nsmce4a (ENSTRUG00000015029)	cenpk (ENSTRUG00000015014)	lbx1b (ENSTRUG00000015003)	slc2a15b (ENSTRUG00000014883)	ENSTRUG00000031732	fgf8b (ENSTRUG00000022621)	dpcd (ENSTRUG00000014821)	poll (ENSTRUG00000014779)	wbp1lb (ENSTRUG00000014761) #16	as3mt (ENSTRUG00000030244)	CNNM2 (ENSTRUG00000014689) #19	nt5c2b (ENSTRUG00000014556)	inab (ENSTRUG00000014528) #22	taf5 (ENSTRUG00000014486) #23	atp5md (ENSTRUG00000019734)	pdcd11 (ENSTRUG00000014291) #25	zgc:175214 (ENSTRUG00000026105)	CALHM1 (ENSTRUG00000014234) #27	ITPRIP (ENSTRUG00000027759)	ENSTRUG00000021079	rab40c (ENSTRUG00000002192)	wfikkn1 (ENSTRUG00000031900)	mettl26 (ENSTRUG00000027506)	ENSTRUG00000013931	ENSTRUG00000032516	ENSTRUG00000028126	bcl11ab (ENSTRUG00000021129)	ENSTRUG00000020515
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Anabantaria	ANCESTRAL SPECIES	1	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Anabantoidei	ANCESTRAL SPECIES		ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a
Climbing perch	MODERN SPECIES		krt99 (ENSATEG00000020521)	krt15 (ENSATEG00000020542)	krt98 (ENSATEG00000020567)	krt94 (ENSATEG00000020591)	ENSATEG00000020598	cenpk (ENSATEG00000020632)	lbx1b (ENSATEG00000020642)	slc2a15b (ENSATEG00000020655)	fgf8b (ENSATEG00000028269)	dpcd (ENSATEG00000020802)	poll (ENSATEG00000020832)	wbp1lb (ENSATEG00000029225) #16	as3mt (ENSATEG00000020869)	ENSATEG00000020907 #19	nt5c2b (ENSATEG00000020922)	inab (ENSATEG00000020981) #22	taf5 (ENSATEG00000021013) #23	atp5md (ENSATEG00000021023)	pdcd11 (ENSATEG00000021043) #25	zgc:175214 (ENSATEG00000026648)	CALHM1 (ENSATEG00000021082) #27	ENSATEG00000021087	zp3c (ENSATEG00000021096)	ENSATEG00000021114	ENSATEG00000021126	ENSATEG00000021160	ENSATEG00000027745	ENSATEG00000021227	ENSATEG00000029744	ENSATEG00000025711	bcl11ab (ENSATEG00000021273)
Siamese fighting fish	MODERN SPECIES		ENSBSLG00000000461	krt99 (ENSBSLG00000000440)	krt98 (ENSBSLG00000000226)	krt15 (ENSBSLG00000000117)	SMAP1 (ENSBSLG00000006854)	cenpk (ENSBSLG00000006834)	lbx1b (ENSBSLG00000006829)	slc2a15b (ENSBSLG00000006540)	fgf8b (ENSBSLG00000006445)	dpcd (ENSBSLG00000006378)	poll (ENSBSLG00000006326)	wbp1lb (ENSBSLG00000006278) #16	as3mt (ENSBSLG00000006175)	CNNM2 (ENSBSLG00000006172) #19	nt5c2b (ENSBSLG00000005814)	inab (ENSBSLG00000005764) #22	taf5 (ENSBSLG00000004941) #23	ENSBSLG00000004614	pdcd11 (ENSBSLG00000004611) #25	zgc:175214 (ENSBSLG00000004607)	CALHM1 (ENSBSLG00000004601) #27	ITPRIP (ENSBSLG00000004596)	zp3c (ENSBSLG00000004592)	rab40c (ENSBSLG00000004590)	wfikkn1 (ENSBSLG00000004588)	ENSBSLG00000004221	ENSBSLG00000004106	ENSBSLG00000004065	ENSBSLG00000004057	bcl11ab (ENSBSLG00000004045)	ccdc85al (ENSBSLG00000004033)
Zig-zag eel	MODERN SPECIES		ENSMAMG00000010885	krt99 (ENSMAMG00000010847)	krt15 (ENSMAMG00000010835)	krt98 (ENSMAMG00000010267)	krt94 (ENSMAMG00000010209)	ENSMAMG00000010206	cenpk (ENSMAMG00000010189)	lbx1b (ENSMAMG00000010182)	fgf8b (ENSMAMG00000024638)	dpcd (ENSMAMG00000009826)	poll (ENSMAMG00000009780)	wbp1lb (ENSMAMG00000009771) #16	as3mt (ENSMAMG00000009749)	ENSMAMG00000009701 #19	nt5c2b (ENSMAMG00000009657)	inab (ENSMAMG00000009645) #22	taf5 (ENSMAMG00000009605) #23	atp5md (ENSMAMG00000009637)	pdcd11 (ENSMAMG00000009572) #25	zgc:175214 (ENSMAMG00000009533)	CALHM1 (ENSMAMG00000009513) #27	ENSMAMG00000009508	zp3c (ENSMAMG00000009483)	ENSMAMG00000009467	ENSMAMG00000009460	ENSMAMG00000009450	ENSMAMG00000009394	ENSMAMG00000027028	ENSMAMG00000009366	ENSMAMG00000009348	ENSMAMG00000024799
Carangaria	ANCESTRAL SPECIES		ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b.tb.b	ENSGT00940000155103.a.b.tb.a	ENSGT00940000156983.a.a
Pleuronectoidei	ANCESTRAL SPECIES	22	ENSGT00400000024592	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b.tb.b	ENSGT00940000155103.a.b.tb.a	ENSGT00940000156983.a.a
Turbot	MODERN SPECIES	20	krt99 (ENSSMAG00000006200)	krt15 (ENSSMAG00000006227)	krt98 (ENSSMAG00000006243)	krt94 (ENSSMAG00000006254)	ENSSMAG00000006263	cenpk (ENSSMAG00000006290)	lbx1b (ENSSMAG00000036098)	poll (ENSSMAG00000006388)	slc2a15b (ENSSMAG00000006312)	fgf8b (ENSSMAG00000006337)	dpcd (ENSSMAG00000006362)	wbp1lb (ENSSMAG00000021668) #16	as3mt (ENSSMAG00000006450)	ENSSMAG00000006481 #19	nt5c2b (ENSSMAG00000006511)	inab (ENSSMAG00000006549) #22	taf5 (ENSSMAG00000006561) #23	atp5md (ENSSMAG00000006592)	pdcd11 (ENSSMAG00000006612) #25	zgc:175214 (ENSSMAG00000033852)	CALHM1 (ENSSMAG00000006637) #27	ENSSMAG00000006683	zp3c (ENSSMAG00000006645)	ENSSMAG00000006688	ENSSMAG00000006701	ENSSMAG00000006735	ENSSMAG00000021720	ENSSMAG00000032558	ENSSMAG00000006850	bcl11ab (ENSSMAG00000027471)	ccdc85al (ENSSMAG00000006997)
Tongue sole	MODERN SPECIES	19	ANKRD66 (ENSCSEG00000011142)	ENSCSEG00000011133	BANF1 (ENSCSEG00000011125)	neurl1aa (ENSCSEG00000011110) #29	ENSCSEG00000011105 #29	SH3PXD2A (ENSCSEG00000011084) #30	stn1 (ENSCSEG00000011015) #31	CNNM2 (ENSCSEG00000010981) #19	as3mt (ENSCSEG00000010967)	ENSCSEG00000010955	dtd1 (ENSCSEG00000010948)	ENSCSEG00000010943	slkb (ENSCSEG00000010926) #33	ENSCSEG00000010915	nt5c2b (ENSCSEG00000010800)	inab (ENSCSEG00000010786) #22	ENSCSEG00000010782	atp5md (ENSCSEG00000010771)	taf5 (ENSCSEG00000010757) #23	pdcd11 (ENSCSEG00000010739) #25	zgc:175214 (ENSCSEG00000010727)	CALHM1 (ENSCSEG00000010717) #27	ITPRIP (ENSCSEG00000010709)	zp3c (ENSCSEG00000010697)	rab40c (ENSCSEG00000010690)	wfikkn1 (ENSCSEG00000010670)	mettl26 (ENSCSEG00000010677)	ENSCSEG00000010573	ENSCSEG00000010535	ENSCSEG00000010524	bcl11ab (ENSCSEG00000010518)
Carangaria_A	ANCESTRAL SPECIES	24	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b.tb.b	ENSGT00940000155103.a.b.tb.a	ENSGT00940000156983.a.a
Seriola	ANCESTRAL SPECIES	11	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b.tb.b	ENSGT00940000155103.a.b.tb.a	ENSGT00940000156983.a.a
Yellowtail amberjack	MODERN SPECIES	3041	krt99 (ENSSLDG00000011125)	krt15 (ENSSLDG00000011011)	krt98 (ENSSLDG00000010975)	krt94 (ENSSLDG00000010940)	SMAP1 (ENSSLDG00000010906)	cenpk (ENSSLDG00000010881)	lbx1b (ENSSLDG00000010867)	slc2a15b (ENSSLDG00000010809)	fgf8b (ENSSLDG00000010661)	dpcd (ENSSLDG00000010604)	poll (ENSSLDG00000010575)	wbp1lb (ENSSLDG00000010555) #16	as3mt (ENSSLDG00000010514)	CNNM2 (ENSSLDG00000010430) #19	nt5c2b (ENSSLDG00000010353)	inab (ENSSLDG00000010328) #22	taf5 (ENSSLDG00000010283) #23	ENSSLDG00000010269	pdcd11 (ENSSLDG00000010228) #25	zgc:175214 (ENSSLDG00000010213)	CALHM1 (ENSSLDG00000010196) #27	ENSSLDG00000010181	zp3c (ENSSLDG00000010156)	rab40c (ENSSLDG00000010124)	wfikkn1 (ENSSLDG00000010109)	mettl26 (ENSSLDG00000010086)	ENSSLDG00000010045	ENSSLDG00000010002	ENSSLDG00000009967	ENSSLDG00000009945	bcl11ab (ENSSLDG00000009922)
Greater amberjack	MODERN SPECIES	84	krt99 (ENSSDUG00000000457)	krt15 (ENSSDUG00000000355)	krt98 (ENSSDUG00000000282)	krt94 (ENSSDUG00000000267)	SMAP1 (ENSSDUG00000000217)	cenpk (ENSSDUG00000000210)	lbx1b (ENSSDUG00000000191)	slc2a15b (ENSSDUG00000000101)	fgf8b (ENSSDUG00000021510)	dpcd (ENSSDUG00000021500)	poll (ENSSDUG00000021485)	wbp1lb (ENSSDUG00000021479) #16	as3mt (ENSSDUG00000021471)	CNNM2 (ENSSDUG00000021457) #19	nt5c2b (ENSSDUG00000021446)	inab (ENSSDUG00000021437) #22	taf5 (ENSSDUG00000021414) #23	atp5md (ENSSDUG00000021405)	pdcd11 (ENSSDUG00000021302) #25	zgc:175214 (ENSSDUG00000021288)	CALHM1 (ENSSDUG00000021282) #27	ENSSDUG00000021274	zp3c (ENSSDUG00000021264)	rab40c (ENSSDUG00000021256)	wfikkn1 (ENSSDUG00000021248)	mettl26 (ENSSDUG00000021237)	ENSSDUG00000021198	ENSSDUG00000021168	ENSSDUG00000021103	bcl11ab (ENSSDUG00000021083)	ccdc85al (ENSSDUG00000021080)
Barramundi perch	MODERN SPECIES	123	krt99 (ENSLCAG00010004003)	krt15 (ENSLCAG00010003939)	krt98 (ENSLCAG00010003920)	krt94 (ENSLCAG00010003907)	SMAP1 (ENSLCAG00010003899)	cenpk (ENSLCAG00010003895)	lbx1b (ENSLCAG00010003893)	slc2a15b (ENSLCAG00010003888)	fgf8b (ENSLCAG00010003879)	dpcd (ENSLCAG00010003873)	poll (ENSLCAG00010003869)	wbp1lb (ENSLCAG00010003854) #16	as3mt (ENSLCAG00010003837)	CNNM2 (ENSLCAG00010003833) #19	nt5c2b (ENSLCAG00010003780)	inab (ENSLCAG00010003759) #22	taf5 (ENSLCAG00010003754) #23	atp5md (ENSLCAG00010003750)	pdcd11 (ENSLCAG00010003747) #25	zgc:175214 (ENSLCAG00010003737)	CALHM1 (ENSLCAG00010003733) #27	ENSLCAG00010003731	zp3c (ENSLCAG00010003728)	rab40c (ENSLCAG00010003725)	wfikkn1 (ENSLCAG00010003719)	ENSLCAG00010003699	ENSLCAG00010003684	ENSLCAG00010003677	ENSLCAG00010003673	bcl11ab (ENSLCAG00010003670)	ccdc85al (ENSLCAG00010003669)
Ovalentaria	ANCESTRAL SPECIES		ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Atherinomorphae	ANCESTRAL SPECIES	23	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Cyprinodontiformes	ANCESTRAL SPECIES	24	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Aplocheiloidei	ANCESTRAL SPECIES	31	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a
Mangrove rivulus	MODERN SPECIES	38	krt99 (ENSKMAG00000020185)	krt15 (ENSKMAG00000020200)	krt98 (ENSKMAG00000020226)	krt94 (ENSKMAG00000020377)	SMAP1 (ENSKMAG00000020892)	cenpk (ENSKMAG00000020916)	lbx1b (ENSKMAG00000020930)	slc2a15b (ENSKMAG00000020935)	fgf8b (ENSKMAG00000020954)	dpcd (ENSKMAG00000020966)	poll (ENSKMAG00000020989)	wbp1lb (ENSKMAG00000021022) #16	as3mt (ENSKMAG00000021033)	CNNM2 (ENSKMAG00000021059) #19	nt5c2b (ENSKMAG00000021101)	inab (ENSKMAG00000021148) #22	taf5 (ENSKMAG00000021159) #23	atp5md (ENSKMAG00000021173)	pdcd11 (ENSKMAG00000021182) #25	zgc:175214 (ENSKMAG00000021197)	CALHM1 (ENSKMAG00000021204) #27	zp3c (ENSKMAG00000021215)	ITPRIP (ENSKMAG00000021224)	rab40c (ENSKMAG00000021228)	wfikkn1 (ENSKMAG00000021240)	mettl26 (ENSKMAG00000021245)	ENSKMAG00000021256	ENSKMAG00000021267	ENSKMAG00000021286	ENSKMAG00000021301	bcl11ab (ENSKMAG00000021315)
Turquoise killifish	MODERN SPECIES	1611	armh3 (ENSNFUG00015001107)	KCNIP2 (ENSNFUG00015001093)	jupa (ENSNFUG00015001005)	ENSNFUG00015000872	ENSNFUG00015000845	krt99 (ENSNFUG00015000839)	krt15 (ENSNFUG00015000834)	krt98 (ENSNFUG00015000761)	krt98 (ENSNFUG00015000712)	ENSNFUG00015000705	krt94 (ENSNFUG00015000694)	SMAP1 (ENSNFUG00015000682)	ENSNFUG00015000676	lbx1b (ENSNFUG00015000669)	nt5c2b (ENSNFUG00015000542)	INAB (ENSNFUG00015000460) #22	taf5 (ENSNFUG00015000359) #23	atp5md (ENSNFUG00015000311)	PDCD11 (ENSNFUG00015000262) #25	Nfu_g_1_015927 (ENSNFUG00015000241)	CALHM1 (ENSNFUG00015000229) #27	ITPRIP (ENSNFUG00015000220)	zp3c (ENSNFUG00015000211)	rab40c (ENSNFUG00015000183)	ENSNFUG00015000177	wfikkn1 (ENSNFUG00015020711)	C3H16ORF13 (ENSNFUG00015020708)	ENSNFUG00015020664	ENSNFUG00015020660	ENSNFUG00015020656	BCL11AB (ENSNFUG00015020651)
Cyprinodontoidei	ANCESTRAL SPECIES	15	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
NAME_4	ANCESTRAL SPECIES	28	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Mummichog	MODERN SPECIES	516									fgf8b (ENSFHEG00000003480)	dpcd (ENSFHEG00000003458)	poll (ENSFHEG00000023246)	wbp1lb (ENSFHEG00000023168) #16	as3mt (ENSFHEG00000023153)	CNNM2 (ENSFHEG00000023134) #19	nt5c2b (ENSFHEG00000023123)	inab (ENSFHEG00000023068) #22	ENSFHEG00000023060 #23	atp5md (ENSFHEG00000023039)	pdcd11 (ENSFHEG00000022997) #25	zgc:175214 (ENSFHEG00000022752)	CALHM1 (ENSFHEG00000022746) #27	zp3c (ENSFHEG00000022739)	ENSFHEG00000022735	rab40c (ENSFHEG00000022727)	wfikkn1 (ENSFHEG00000022707)	mettl26 (ENSFHEG00000022695)	ENSFHEG00000022669	ENSFHEG00000022512	ENSFHEG00000022510
Sheepshead minnow	MODERN SPECIES	1935															ENSCVAG00000003964	inab (ENSCVAG00000004013) #22
Poeciliinae	ANCESTRAL SPECIES	9	ENSGT00950000182969.B.c.a.a.a.h	ENSGT00950000182969.B.c.a.a.a.g	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00940000161979.B.o.cb.d.a.a.a.b.a.a.b.a	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a	ENSGT00390000006916.c
Poecilia	ANCESTRAL SPECIES	6	ENSGT00950000182969.B.c.a.a.a.h	ENSGT00950000182969.B.c.a.a.a.g	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00940000161979.B.o.cb.d.a.a.a.b.a.a.b.a	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a	ENSGT00390000006916.c
NAME_6	ANCESTRAL SPECIES	4	ENSGT00950000182969.B.c.a.a.a.h	ENSGT00950000182969.B.c.a.a.a.g.c	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00940000161979.B.o.cb.d.a.a.a.b.a.a.b.a	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a	ENSGT00390000006916.c
Amazon molly	DUPLICATION
Amazon molly	MODERN SPECIES	263	cenpk (ENSPFOG00000004611)	SMAP1 (ENSPFOG00000021952)	cenpk (ENSPFOG00000004715)	lbx1b (ENSPFOG00000004721)	ENSPFOG00000024163	slc2a15b (ENSPFOG00000004745)	fgf8b (ENSPFOG00000005060)	dpcd (ENSPFOG00000005133)	poll (ENSPFOG00000005193)	ENSPFOG00000005288	wbp1lb (ENSPFOG00000005308) #16	as3mt (ENSPFOG00000005360)	CNNM2 (ENSPFOG00000005465) #19	ENSPFOG00000023945	nt5c2b (ENSPFOG00000005673)	inab (ENSPFOG00000005819) #22	taf5 (ENSPFOG00000005851) #23	atp5md (ENSPFOG00000005996)	pdcd11 (ENSPFOG00000006012) #25	zgc:175214 (ENSPFOG00000006256)	CALHM1 (ENSPFOG00000006328) #27	ENSPFOG00000006350	rab40c (ENSPFOG00000006359)	wfikkn1 (ENSPFOG00000006418)	mettl26 (ENSPFOG00000006434)	ENSPFOG00000006561	ENSPFOG00000006907	ENSPFOG00000007052	bcl11ab (ENSPFOG00000007302)	ccdc85al (ENSPFOG00000007370)	sec23b (ENSPFOG00000007390)
Amazon molly	MODERN SPECIES	81																inab (ENSPFOG00000000806) #22
Sailfin molly	MODERN SPECIES	155												wbp1lb (ENSPLAG00000014630) #16	as3mt (ENSPLAG00000014626)	CNNM2 (ENSPLAG00000014611) #19	nt5c2b (ENSPLAG00000014581)	inab (ENSPLAG00000014545) #22	taf5 (ENSPLAG00000014541) #23	atp5md (ENSPLAG00000014523)	pdcd11 (ENSPLAG00000014494) #25	zgc:175214 (ENSPLAG00000014102)	CALHM1 (ENSPLAG00000014085) #27	ENSPLAG00000014076	rab40c (ENSPLAG00000014071)	wfikkn1 (ENSPLAG00000014047)	mettl26 (ENSPLAG00000014038)	ENSPLAG00000014009	ENSPLAG00000013658	ENSPLAG00000013591	ENSPLAG00000013559	bcl11ab (ENSPLAG00000013545)
Guppy	MODERN SPECIES	439	krt98 (ENSPREG00000000457)	ENSPREG00000000458	krt94 (ENSPREG00000000459)	SMAP1 (ENSPREG00000000460)	cenpk (ENSPREG00000000461)	lbx1b (ENSPREG00000000462)	slc2a15b (ENSPREG00000000463)	fgf8b (ENSPREG00000000464)	dpcd (ENSPREG00000000465)	poll (ENSPREG00000000466)	ENSPREG00000000467	wbp1lb (ENSPREG00000000468) #16	as3mt (ENSPREG00000000469)	CNNM2 (ENSPREG00000000470) #19	nt5c2b (ENSPREG00000000471)	inab (ENSPREG00000000472) #22	taf5 (ENSPREG00000000473) #23	atp5md (ENSPREG00000000474)	pdcd11 (ENSPREG00000000475) #25	zgc:175214 (ENSPREG00000000476)	CALHM1 (ENSPREG00000000477) #27	ENSPREG00000000478	rab40c (ENSPREG00000000479)	wfikkn1 (ENSPREG00000000480)	mettl26 (ENSPREG00000000481)	ENSPREG00000000482	ENSPREG00000000483	ENSPREG00000000484	ENSPREG00000000485	bcl11ab (ENSPREG00000000486)	ccdc85al (ENSPREG00000000487)
Platyfish	MODERN SPECIES	19	ENSXMAG00000025322	ENSXMAG00000023373	krt94 (ENSXMAG00000000155)	SMAP1 (ENSXMAG00000000144)	cenpk (ENSXMAG00000000139)	lbx1b (ENSXMAG00000012488)	slc2a15b (ENSXMAG00000000115)	fgf8b (ENSXMAG00000021661)	dpcd (ENSXMAG00000000098)	poll (ENSXMAG00000000075)	ENSXMAG00000029703	wbp1lb (ENSXMAG00000000063) #16	as3mt (ENSXMAG00000000056)	CNNM2 (ENSXMAG00000000054) #19	nt5c2b (ENSXMAG00000029312)	inab (ENSXMAG00000001377) #22	atp5md (ENSXMAG00000004636)	taf5 (ENSXMAG00000001343) #23	pdcd11 (ENSXMAG00000004638) #25	zgc:175214 (ENSXMAG00000026427)	CALHM1 (ENSXMAG00000028928) #27	ENSXMAG00000004659	rab40c (ENSXMAG00000004660)	wfikkn1 (ENSXMAG00000004666)	mettl26 (ENSXMAG00000028408)	ENSXMAG00000004675	ENSXMAG00000024097	ENSXMAG00000004687	ENSXMAG00000004735	ENSXMAG00000029197	ENSXMAG00000025021
Oryzias	ANCESTRAL SPECIES	28	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a	ENSGT00390000006916.c
Oryzias_b	ANCESTRAL SPECIES	25	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a	ENSGT00390000006916.c
Javanese ricefish	MODERN SPECIES		krt99 (ENSOJAG00000000865)	ENSOJAG00000000812	krt98 (ENSOJAG00000000775)	KRT19 (ENSOJAG00000000485)	ENSOJAG00000000325	SMAP1 (ENSOJAG00000000318)	cenpk (ENSOJAG00000000304)	lbx1b (ENSOJAG00000000302)	slc2a15b (ENSOJAG00000000287)	fgf8b (ENSOJAG00000000269)	dpcd (ENSOJAG00000000263)	poll (ENSOJAG00000000244)	wbp1lb (ENSOJAG00000000223) #16	as3mt (ENSOJAG00000000202)	CNNM2 (ENSOJAG00000000181) #19	inab (ENSOJAG00000000103) #22	taf5 (ENSOJAG00000000065) #23	atp5md (ENSOJAG00000000058)	zgc:175214 (ENSOJAG00000020287)	CALHM1 (ENSOJAG00000020274) #27	ENSOJAG00000020252	rab40c (ENSOJAG00000020244)	wfikkn1 (ENSOJAG00000020222)	mettl26 (ENSOJAG00000020215)	ENSOJAG00000020098	ENSOJAG00000019806	ENSOJAG00000019795	ENSOJAG00000019789	ENSOJAG00000019778	ENSOJAG00000019770	bcl11ab (ENSOJAG00000019758)
Indian medaka	MODERN SPECIES	35	ENSOMEG00000011746	krt99 (ENSOMEG00000011727)	ENSOMEG00000011684	krt98 (ENSOMEG00000011645)	krt94 (ENSOMEG00000011603)	SMAP1 (ENSOMEG00000011561)	cenpk (ENSOMEG00000011482)	lbx1b (ENSOMEG00000011455)	slc2a15b (ENSOMEG00000011443)	fgf8b (ENSOMEG00000011400)	dpcd (ENSOMEG00000011358)	poll (ENSOMEG00000011333)	wbp1lb (ENSOMEG00000011311) #16	CNNM2 (ENSOMEG00000011258) #19	nt5c2b (ENSOMEG00000011133)	inab (ENSOMEG00000011083) #22	taf5 (ENSOMEG00000011058) #23	atp5md (ENSOMEG00000010965)	ENSOMEG00000010947 #25	pdcd11 (ENSOMEG00000010904) #25	zgc:175214 (ENSOMEG00000010830)	CALHM1 (ENSOMEG00000010803) #27	ENSOMEG00000010787	rab40c (ENSOMEG00000010770)	wfikkn1 (ENSOMEG00000010737)	mettl26 (ENSOMEG00000010721)	ENSOMEG00000010693	ENSOMEG00000010665	ENSOMEG00000010609	ENSOMEG00000010560	ENSOMEG00000010513
Oryzias_a	ANCESTRAL SPECIES	34	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01050000244827.D.b.b.b	ENSGT01030000234610.b.a.b.a #27	ENSGT00940000166025.a	ENSGT00390000012228 #25	ENSGT00940000166377	ENSGT00940000153342.a #23	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000159034 #19	ENSGT00390000001742.a	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592
Japanese Medaka HdrR	MODERN SPECIES		bcl11ab (ENSORLG00000022323)	ENSORLG00000024629	ENSORLG00000013142	ENSORLG00000013110	ENSORLG00000013096	mettl26 (ENSORLG00000013070)	wfikkn1 (ENSORLG00000013057)	RAB40C (ENSORLG00000013043)	ENSORLG00000013028	CALHM1 (ENSORLG00000013016) #27	zgc:175214 (ENSORLG00000026419)	pdcd11 (ENSORLG00000012995) #25	atp5md (ENSORLG00000024513)	taf5 (ENSORLG00000012986) #23	nt5c2b (ENSORLG00000012969)	inab (ENSORLG00000012931) #22	CNNM2 (ENSORLG00000012918) #19	as3mt (ENSORLG00000012900)	wbp1lb (ENSORLG00000024654) #16	poll (ENSORLG00000012875)	dpcd (ENSORLG00000027280)	fgf8b (ENSORLG00000012857)	slc2a15b (ENSORLG00000012848)	lbx1b (ENSORLG00000012711)	cenpk (ENSORLG00000012705)	SMAP1 (ENSORLG00000012694)	krt94 (ENSORLG00000012662)	krt98 (ENSORLG00000012646)	ENSORLG00000012618	krt99 (ENSORLG00000012569)	ENSORLG00000012551
Chinese medaka	MODERN SPECIES	305	bcl11ab (ENSOSIG00000015284)	ENSOSIG00000015285	ENSOSIG00000015288	PLD5 (ENSOSIG00000015289)	ENSOSIG00000015291	mettl26 (ENSOSIG00000015410)	wfikkn1 (ENSOSIG00000015413)	rab40c (ENSOSIG00000015415)	ITPRIP (ENSOSIG00000015417)	CALHM1 (ENSOSIG00000015418) #27	zgc:175214 (ENSOSIG00000015419)	pdcd11 (ENSOSIG00000015423) #25	atp5md (ENSOSIG00000015431)	taf5 (ENSOSIG00000015439) #23	nt5c2b (ENSOSIG00000015706)	inab (ENSOSIG00000015976) #22	CNNM2 (ENSOSIG00000015977) #19	as3mt (ENSOSIG00000015978)	wbp1lb (ENSOSIG00000015980) #16	poll (ENSOSIG00000015983)	dpcd (ENSOSIG00000015989)	fgf8b (ENSOSIG00000015992)	slc2a15b (ENSOSIG00000016129)	lbx1b (ENSOSIG00000016142)	cenpk (ENSOSIG00000016144)	ENSOSIG00000016145	krt94 (ENSOSIG00000016147)	krt98 (ENSOSIG00000016149)	ENSOSIG00000016151	ENSOSIG00000016154	ENSOSIG00000016157
Ovalentaria_B	ANCESTRAL SPECIES	4	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Pomacentridae	ANCESTRAL SPECIES	20	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a
Pomacentridae_A	ANCESTRAL SPECIES	13	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a
Amphiprion	ANCESTRAL SPECIES		ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000166377	ENSGT00940000153342.a #23	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a	ENSGT00940000157361.a
Clown anemonefish	MODERN SPECIES	1065	crabp2b (ENSAOCG00000014237)	scamp3 (ENSAOCG00000014254)	ENSAOCG00000014280	ash1l (ENSAOCG00000014299)	ENSAOCG00000014327	myof (ENSAOCG00000014674)	aarsd1 (ENSAOCG00000014735)	ptges3l (ENSAOCG00000014828)	kat7b (ENSAOCG00000014886)	ENSAOCG00000014899	dlx4b (ENSAOCG00000014952)	dlx3b (ENSAOCG00000014963)	itga3b (ENSAOCG00000002539)	ENSAOCG00000015119	ENSAOCG00000015178	inab (ENSAOCG00000001059) #22	atp5md (ENSAOCG00000015202)	taf5 (ENSAOCG00000001060) #23	pdcd11 (ENSAOCG00000015287) #25	zgc:175214 (ENSAOCG00000015327)	CALHM1 (ENSAOCG00000015350) #27	ENSAOCG00000001067	zp3c (ENSAOCG00000015396)	rab40c (ENSAOCG00000015431)	wfikkn1 (ENSAOCG00000015440)	mettl26 (ENSAOCG00000015462)	ENSAOCG00000001800	ENSAOCG00000015763	ENSAOCG00000015891	ENSAOCG00000015921	bcl11ab (ENSAOCG00000015947)
Orange clownfish	MODERN SPECIES	17	krt99 (ENSAPEG00000020988)	krt15 (ENSAPEG00000020944)	krt98 (ENSAPEG00000020925)	krt94 (ENSAPEG00000020916)	SMAP1 (ENSAPEG00000020861)	cenpk (ENSAPEG00000020835)	lbx1b (ENSAPEG00000020806)	slc2a15b (ENSAPEG00000020772)	fgf8b (ENSAPEG00000020700)	dpcd (ENSAPEG00000020676)	poll (ENSAPEG00000020633)	wbp1lb (ENSAPEG00000020616) #16	as3mt (ENSAPEG00000020598)	CNNM2 (ENSAPEG00000020499) #19	nt5c2b (ENSAPEG00000020408)	inab (ENSAPEG00000020332) #22	atp5md (ENSAPEG00000020309)	taf5 (ENSAPEG00000020262) #23	pdcd11 (ENSAPEG00000020240) #25	zgc:175214 (ENSAPEG00000020209)	CALHM1 (ENSAPEG00000020194) #27	ENSAPEG00000020183	ENSAPEG00000020158	rab40c (ENSAPEG00000020137)	wfikkn1 (ENSAPEG00000020129)	mettl26 (ENSAPEG00000020105)	ENSAPEG00000019979	ENSAPEG00000019919	ENSAPEG00000019840	ENSAPEG00000019811	bcl11ab (ENSAPEG00000019802)
Spiny chromis	MODERN SPECIES	22				krt94 (ENSAPOG00000015225)	SMAP1 (ENSAPOG00000015235)	cenpk (ENSAPOG00000015249)	lbx1b (ENSAPOG00000015260)	slc2a15b (ENSAPOG00000015325)	fgf8b (ENSAPOG00000015344)	dpcd (ENSAPOG00000015370)	poll (ENSAPOG00000015387)	wbp1lb (ENSAPOG00000015408) #16	as3mt (ENSAPOG00000015417)	CNNM2 (ENSAPOG00000015454) #19	nt5c2b (ENSAPOG00000015537)	inab (ENSAPOG00000015546) #22	taf5 (ENSAPOG00000015600) #23	atp5md (ENSAPOG00000015614)	pdcd11 (ENSAPOG00000015629) #25	zgc:175214 (ENSAPOG00000015672)	CALHM1 (ENSAPOG00000015693) #27	ENSAPOG00000015720	zp3c (ENSAPOG00000015759)	rab40c (ENSAPOG00000015787)	wfikkn1 (ENSAPOG00000015798)	mettl26 (ENSAPOG00000015790)	ENSAPOG00000015828	ENSAPOG00000015843	CEP170 (ENSAPOG00000015920)	bcl11ab (ENSAPOG00000000446)	ccdc85al (ENSAPOG00000015989)
Bicolor damselfish	MODERN SPECIES	524														CNNM2 (ENSSPAG00000017422) #19	nt5c2b (ENSSPAG00000017444)	inab (ENSSPAG00000017483) #22	taf5 (ENSSPAG00000017530) #23	atp5md (ENSSPAG00000017543)	pdcd11 (ENSSPAG00000017558) #25	zgc:175214 (ENSSPAG00000017594)	ENSSPAG00000017607	CALHM1 (ENSSPAG00000017617) #27	ENSSPAG00000017624	rab40c (ENSSPAG00000017649)	wfikkn1 (ENSSPAG00000017678)	mettl26 (ENSSPAG00000017695)	ENSSPAG00000017727	ENSSPAG00000017795	ENSSPAG00000017859	ENSSPAG00000017908	bcl11ab (ENSSPAG00000017925)
Cichlidae	ANCESTRAL SPECIES	3	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	3	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	5	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Haplochromini	ANCESTRAL SPECIES	3	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031.e.a	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Burton s mouthbrooder	MODERN SPECIES	337	ENSHBUG00000019747	krt15 (ENSHBUG00000019759)	krt98 (ENSHBUG00000019771)	krt94 (ENSHBUG00000019853)	SMAP1 (ENSHBUG00000019912)	cenpk (ENSHBUG00000019922)	lbx1b (ENSHBUG00000019934)	slc2a15b (ENSHBUG00000019972)	fgf8b (ENSHBUG00000020004)	dpcd (ENSHBUG00000020045)	poll (ENSHBUG00000020101)	wbp1lb (ENSHBUG00000020110) #16	as3mt (ENSHBUG00000020119)	CNNM2 (ENSHBUG00000020136) #19	nt5c2b (ENSHBUG00000020172)	inab (ENSHBUG00000020185) #22	ENSHBUG00000020202 #23	atp5md (ENSHBUG00000020211)	pdcd11 (ENSHBUG00000020226) #25	zgc:175214 (ENSHBUG00000020259)	CALHM1 (ENSHBUG00000020282) #27	ENSHBUG00000020298	zp3c (ENSHBUG00000020330)	rab40c (ENSHBUG00000020360)	wfikkn1 (ENSHBUG00000000620)	mettl26 (ENSHBUG00000020388)	CCDC88A (ENSHBUG00000020445)	ENSHBUG00000020461	ENSHBUG00000020482	bcl11ab (ENSHBUG00000020505)	KLHL10 (ENSHBUG00000020535)
Haplochromini_A	ANCESTRAL SPECIES	2	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031.e.a	ENSGT00390000014031.f	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Haplochromini_B	ANCESTRAL SPECIES	23	ENSGT00950000182969.B.c.b	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.a.a.a	ENSGT00940000155258	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.a.a	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031.f	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b	ENSGT00940000179440	ENSGT00950000183059.b.a.b.r	ENSGT00940000155103.a.b	ENSGT00940000156983.a.a
Zebra mbuna	MODERN SPECIES	1109	krt99 (ENSMZEG00005008473)	krt15 (ENSMZEG00005008487)	krt98 (ENSMZEG00005008496)	krt94 (ENSMZEG00005008511)	SMAP1 (ENSMZEG00005008548)	cenpk (ENSMZEG00005008583)	lbx1b (ENSMZEG00005008600)	slc2a15b (ENSMZEG00005008607)	fgf8b (ENSMZEG00005008642)	dpcd (ENSMZEG00005008653)	poll (ENSMZEG00005008677)	wbp1lb (ENSMZEG00005008705) #16	as3mt (ENSMZEG00005008714)	CNNM2 (ENSMZEG00005008760) #19	nt5c2b (ENSMZEG00005008782)	inab (ENSMZEG00005008834) #22	taf5 (ENSMZEG00005008902) #23	atp5md (ENSMZEG00005008937)	pdcd11 (ENSMZEG00005008949) #25	zgc:175214 (ENSMZEG00005008984)	CALHM1 (ENSMZEG00005009017) #27	zp3c (ENSMZEG00005009033)	ENSMZEG00005009071	rab40c (ENSMZEG00005009079)	wfikkn1 (ENSMZEG00005009090)	mettl26 (ENSMZEG00005009103)	ENSMZEG00005009130	ENSMZEG00005009150	ENSMZEG00005009167	ENSMZEG00005009231	ENSMZEG00005009267
Eastern happy	MODERN SPECIES	18	ENSACLG00000018945	SMAP1 (ENSACLG00000018925)	cenpk (ENSACLG00000018904)	lbx1b (ENSACLG00000018897)	slc2a15b (ENSACLG00000018850)	dpcd (ENSACLG00000018832)	poll (ENSACLG00000018810)	fgf8b (ENSACLG00000018794)	dpcd (ENSACLG00000018774)	poll (ENSACLG00000018740)	wbp1lb (ENSACLG00000018676) #16	as3mt (ENSACLG00000018658)	CNNM2 (ENSACLG00000018650) #19	CNNM2 (ENSACLG00000018611) #19	nt5c2b (ENSACLG00000018558)	inab (ENSACLG00000018488) #22	taf5 (ENSACLG00000018443) #23	atp5md (ENSACLG00000018433)	pdcd11 (ENSACLG00000018236) #25	zgc:175214 (ENSACLG00000018202)	CALHM1 (ENSACLG00000018194) #27	ENSACLG00000018163	zp3c (ENSACLG00000018082)	rab40c (ENSACLG00000018049)	wfikkn1 (ENSACLG00000018030)	mettl26 (ENSACLG00000018017)	CCDC88A (ENSACLG00000017901)	ENSACLG00000017867	ENSACLG00000017827	ENSACLG00000017803	ENSACLG00000017791
P. nyererei	MODERN SPECIES	360	krt99 (ENSPNYG00000003158)	krt15 (ENSPNYG00000003167)	krt98 (ENSPNYG00000003181)	krt94 (ENSPNYG00000003207)	SMAP1 (ENSPNYG00000003337)	cenpk (ENSPNYG00000003376)	lbx1b (ENSPNYG00000003403)	slc2a15b (ENSPNYG00000003459)	fgf8b (ENSPNYG00000003504)	dpcd (ENSPNYG00000003582)	poll (ENSPNYG00000003613)	wbp1lb (ENSPNYG00000003656) #16	as3mt (ENSPNYG00000003664)	CNNM2 (ENSPNYG00000003686) #19	nt5c2b (ENSPNYG00000003781)	inab (ENSPNYG00000003822) #22	taf5 (ENSPNYG00000003900) #23	atp5md (ENSPNYG00000003949)	pdcd11 (ENSPNYG00000003979) #25	zgc:175214 (ENSPNYG00000004013)	ENSPNYG00000004053	zp3c (ENSPNYG00000004071)	ENSPNYG00000004095	wfikkn1 (ENSPNYG00000004110)	mettl26 (ENSPNYG00000004134)	CCDC88A (ENSPNYG00000004174)	ENSPNYG00000004246	ENSPNYG00000004295	ENSPNYG00000004321	bcl11ab (ENSPNYG00000004343)	ENSPNYG00000004367
Lyretail cichlid	MODERN SPECIES	308	ENSNBRG00000022987	krt15 (ENSNBRG00000022980)	krt98 (ENSNBRG00000022456)	krt94 (ENSNBRG00000022244)	SMAP1 (ENSNBRG00000022222)	cenpk (ENSNBRG00000022205)	lbx1b (ENSNBRG00000022180)	slc2a15b (ENSNBRG00000022146)	fgf8b (ENSNBRG00000022061)	dpcd (ENSNBRG00000022033)	poll (ENSNBRG00000022014)	wbp1lb (ENSNBRG00000021999) #16	as3mt (ENSNBRG00000021942)	CNNM2 (ENSNBRG00000021863) #19	nt5c2b (ENSNBRG00000021814)	inab (ENSNBRG00000021780) #22	taf5 (ENSNBRG00000021737) #23	pdcd11 (ENSNBRG00000021596) #25	zgc:175214 (ENSNBRG00000021568)	CALHM1 (ENSNBRG00000021549) #27	ENSNBRG00000021543	zp3c (ENSNBRG00000021522)	rab40c (ENSNBRG00000021497)	wfikkn1 (ENSNBRG00000021480)	mettl26 (ENSNBRG00000021467)	ENSNBRG00000021456	ENSNBRG00000021421	ENSNBRG00000021404	ENSNBRG00000021385	bcl11ab (ENSNBRG00000021368)	KLHL10 (ENSNBRG00000021359)
Nile tilapia	MODERN SPECIES	18	krt99 (ENSONIG00000018806)	krt15 (ENSONIG00000037937)	krt94 (ENSONIG00000018807)	SMAP1 (ENSONIG00000018813)	cenpk (ENSONIG00000018814)	lbx1b (ENSONIG00000036425)	slc2a15b (ENSONIG00000018816)	fgf8b (ENSONIG00000031278)	ENSONIG00000035113	dpcd (ENSONIG00000018819)	poll (ENSONIG00000018822)	wbp1lb (ENSONIG00000028546) #16	as3mt (ENSONIG00000018826)	CNNM2 (ENSONIG00000018828) #19	nt5c2b (ENSONIG00000018829)	inab (ENSONIG00000029868) #22	taf5 (ENSONIG00000018833) #23	atp5md (ENSONIG00000032430)	pdcd11 (ENSONIG00000018835) #25	zp3c (ENSONIG00000036390)	zgc:175214 (ENSONIG00000042378)	CALHM1 (ENSONIG00000036693) #27	ITPRIP (ENSONIG00000018844)	rab40c (ENSONIG00000018845)	wfikkn1 (ENSONIG00000018847)	ENSONIG00000018849	ENSONIG00000018852	ENSONIG00000018854	bcl11ab (ENSONIG00000034257)	ENSONIG00000037884	ccdc85al (ENSONIG00000035583)
Midas cichlid	MODERN SPECIES	1113	krt15 (ENSACIG00000007504)	krt98 (ENSACIG00000007137)	krt94 (ENSACIG00000007065)	smap1 (ENSACIG00000007041)	cenpk (ENSACIG00000007018)	lbx1b (ENSACIG00000007010)	slc2a15b (ENSACIG00000006971)	fgf8b (ENSACIG00000006920)	dpcd (ENSACIG00000006893)	poll (ENSACIG00000006868)	wbp1lb (ENSACIG00000006833) #16	as3mt (ENSACIG00000006747)	CNNM2 (ENSACIG00000006633) #19	nt5c2b (ENSACIG00000006589)	ENSACIG00000006583	inab (ENSACIG00000006532) #22	taf5 (ENSACIG00000006505) #23	ENSACIG00000006495	ENSACIG00000006458 #25	zgc:175214 (ENSACIG00000006436)	CALHM1 (ENSACIG00000006422) #27	ENSACIG00000006405	zp3c (ENSACIG00000006384)	rab40c (ENSACIG00000006363)	wfikkn1 (ENSACIG00000006350)	mettl26 (ENSACIG00000006328)	CCDC88A (ENSACIG00000006263)
Tiger tail seahorse	MODERN SPECIES	382	krt98 (ENSHCOG00000015617)	krt94 (ENSHCOG00000015619)	SMAP1 (ENSHCOG00000015623)	cenpk (ENSHCOG00000015628)	lbx1b (ENSHCOG00000015655)	slc2a15b (ENSHCOG00000015684)	fgf8b (ENSHCOG00000015697)	dpcd (ENSHCOG00000015714)	poll (ENSHCOG00000015721)	ENSHCOG00000015728	wbp1lb (ENSHCOG00000015735) #16	as3mt (ENSHCOG00000015739)	as3mt (ENSHCOG00000015743)	CNNM2 (ENSHCOG00000015891) #19	nt5c2b (ENSHCOG00000015940)	inab (ENSHCOG00000015969) #22	atp5md (ENSHCOG00000015974)	taf5 (ENSHCOG00000015986) #23	pdcd11 (ENSHCOG00000016006) #25	zgc:175214 (ENSHCOG00000016032)	CALHM1 (ENSHCOG00000016043) #27	zp3c (ENSHCOG00000016062)	rab40c (ENSHCOG00000016094)	wfikkn1 (ENSHCOG00000016101)	mettl26 (ENSHCOG00000016110)	ENSHCOG00000016166	ENSHCOG00000016183	ENSHCOG00000016200	ENSHCOG00000016234	ENSHCOG00000016242	ENSHCOG00000016288
Pinecone sodierfish	MODERN SPECIES		krt99 (ENSMMDG00005007454)	krt15 (ENSMMDG00005007456)	krt98 (ENSMMDG00005007462)	krt94 (ENSMMDG00005007671)	SMAP1 (ENSMMDG00005007676)	cenpk (ENSMMDG00005007682)	lbx1b (ENSMMDG00005007684)	slc2a15b (ENSMMDG00005007691)	fgf8b (ENSMMDG00005007695)	dpcd (ENSMMDG00005007698)	poll (ENSMMDG00005007701)	wbp1lb (ENSMMDG00005007703) #16	as3mt (ENSMMDG00005007716)	CNNM2 (ENSMMDG00005007741) #19	nt5c2b (ENSMMDG00005007771)	inab (ENSMMDG00005007875) #22	taf5 (ENSMMDG00005008045) #23	atp5md (ENSMMDG00005008056)	pdcd11 (ENSMMDG00005008071) #25	zgc:175214 (ENSMMDG00005008175)	CALHM1 (ENSMMDG00005008179) #27	ENSMMDG00005008183	zp3c (ENSMMDG00005008188)	rab40c (ENSMMDG00005008191)	wfikkn1 (ENSMMDG00005008192)	mettl26 (ENSMMDG00005008195)	ENSMMDG00005008197	ENSMMDG00005008200	ENSMMDG00005008201	ENSMMDG00005008204	ENSMMDG00005008207
Protacanthopterygii	ANCESTRAL SPECIES	142	ENSGT01100000263476.B.b.a.b	ENSGT00950000183029.B.j.e.b	ENSGT00940000155933.b.b	ENSGT00940000155134.z	ENSGT00940000155884.b	ENSGT00390000006243	ENSGT00940000164611.b	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1371															ENSGT00940000163289.b.a.a.e	ENSGT00940000154418.a.a.b.c.a #22	ENSGT00940000153342.a.e.b #23
Salmoninae_a	ANCESTRAL SPECIES	360															ENSGT00940000163289.b.a.a.f	ENSGT00940000154418.a.a.b.c.a #22	ENSGT00940000153342.a.e.b #23
Salmo	ANCESTRAL SPECIES	95	ENSGT01100000263476.A.b.a.a	ENSGT00950000183029.B.j.e.b.a	ENSGT00940000155933.b.b.e.b	ENSGT00940000155134.z.f.b	ENSGT00940000155884.b.d.a	ENSGT00390000006243.l	ENSGT00940000164611.b.b	ENSGT00940000164095.b.a.b	ENSGT00940000159518.b.e	ENSGT00390000014031.k	ENSGT00940000158515.k.b	ENSGT00950000183109.c.a.a.a.b.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034.s #19	ENSGT00940000163289.b.a.a.f	ENSGT00940000154418.a.a.b.c.a #22	ENSGT00940000153342.a.e.a.a #23	ENSGT00940000166377.g	ENSGT00390000012228.k #25
River trout	MODERN SPECIES	31	ENSSTUG00000049762	ENSSTUG00000049586	RIMS1 (ENSSTUG00000049254)	ENSSTUG00000049196	cenpk (ENSSTUG00000049185)	lbx1b (ENSSTUG00000049180)	ENSSTUG00000049091	fgf8b (ENSSTUG00000049053)	dpcd (ENSSTUG00000049043)	poll (ENSSTUG00000049036)	wbp1lb (ENSSTUG00000049033) #16	as3mt (ENSSTUG00000048917)	CNNM2 (ENSSTUG00000048902) #19	nt5c2b (ENSSTUG00000048853)	ENSSTUG00000048836	inab (ENSSTUG00000048835) #22	taf5 (ENSSTUG00000048826) #23	atp5md (ENSSTUG00000048822)	taf5 (ENSSTUG00000048640) #23	atp5md (ENSSTUG00000048617)	pdcd11 (ENSSTUG00000048536) #25	zgc:175214 (ENSSTUG00000048511)	CALHM1 (ENSSTUG00000048506) #27	ITPRIP (ENSSTUG00000048503)	zp3c (ENSSTUG00000048496)	RAB40C (ENSSTUG00000048487)	wfikkn1 (ENSSTUG00000048480)	mettl26 (ENSSTUG00000048472)	ENSSTUG00000048425	ENSSTUG00000048410	ENSSTUG00000048398
Atlantic salmon	MODERN SPECIES	11	ENSSSAG00000077363	ENSSSAG00000077370	ENSSSAG00000077417	ENSSSAG00000077953	ENSSSAG00000078828	cenpk (ENSSSAG00000000322)	lbx1b (ENSSSAG00000106457)	ENSSSAG00000000388	fgf8b (ENSSSAG00000097919)	dpcd (ENSSSAG00000000437)	poll (ENSSSAG00000008385)	wbp1lb (ENSSSAG00000111043) #16	as3mt (ENSSSAG00000000508)	ENSSSAG00000000557 #19	nt5c2b (ENSSSAG00000078886)	inab (ENSSSAG00000079284) #22	pdcd11 (ENSSSAG00000079293) #25	zgc:175214 (ENSSSAG00000110688)	ENSSSAG00000112980 #27	ENSSSAG00000079308	zp3c (ENSSSAG00000079310)	ENSSSAG00000079320	ENSSSAG00000079324	ENSSSAG00000108699	ENSSSAG00000000905	ENSSSAG00000001129	ENSSSAG00000000829	ENSSSAG00000119971	ENSSSAG00000001138	ENSSSAG00000009405	ENSSSAG00000084485
Oncorhynchus	ANCESTRAL SPECIES	42	ENSGT01100000263476.A.b.a.a	ENSGT00950000183029.B.j.f	ENSGT00940000155933.b.b.e.b	ENSGT00940000155134.z.f.a.b	ENSGT00940000155884.b.d	ENSGT00390000006243.m	ENSGT00940000164611.b.c.b	ENSGT00940000164095.b.b	ENSGT00940000159518.b.g	ENSGT00390000014031.i	ENSGT00940000158515.l	ENSGT00950000183109.c.a.a.a.b.b.b #16	ENSGT00390000001742.a.m	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a.f	ENSGT00940000154418.a.a.b.c.a #22	ENSGT00940000153342.a.e.b #23	ENSGT00940000166377.h	ENSGT00390000012228.n #25	ENSGT00940000166025.a.e	ENSGT01030000234610.b.a.b.a.j #27	ENSGT01050000244827.D.b.b.b.c	ENSGT01030000234567.A.a.a.a.a.b.f.e	ENSGT00940000158979.e.b.c	ENSGT00940000167090.f	ENSGT00390000010750.a.q	ENSGT00940000155559.a.b.o	ENSGT00950000183059.b.a.b.r.d.b	ENSGT00940000155103.a.b.jd.d	ENSGT00940000163496.a.v.b.a.a	ENSGT00940000157361.a.k
Rainbow trout	MODERN SPECIES	4	ENSOMYG00000035283	ENSOMYG00000035209	ENSOMYG00000034676	ENSOMYG00000031395	ENSOMYG00000030949	cenpk (ENSOMYG00000030919)	lbx1b (ENSOMYG00000030905)	ENSOMYG00000030866	fgf8b (ENSOMYG00000003927)	dpcd (ENSOMYG00000030819)	poll (ENSOMYG00000030792)	wbp1lb (ENSOMYG00000030780) #16	as3mt (ENSOMYG00000030751)	ENSOMYG00000030734 #19	nt5c2b (ENSOMYG00000029057)	inab (ENSOMYG00000028395) #22	taf5 (ENSOMYG00000028324) #23	atp5md (ENSOMYG00000028298)	pdcd11 (ENSOMYG00000027938) #25	zgc:175214 (ENSOMYG00000027731)	CALHM1 (ENSOMYG00000027719) #27	ENSOMYG00000027713	zp3c (ENSOMYG00000061831)	ENSOMYG00000075555	ENSOMYG00000027700	ENSOMYG00000052288	ENSOMYG00000027671	ENSOMYG00000027663	ENSOMYG00000027606	ENSOMYG00000027526	ENSOMYG00000027494
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00940000154418.a.a.b.c.a #22
Coho salmon	MODERN SPECIES	12	ENSOKIG00005024807	ENSOKIG00005024829	RIMS1 (ENSOKIG00005024968)	ENSOKIG00005025675	ENSOKIG00005025692	lbx1b (ENSOKIG00005025704)	ENSOKIG00005025752	fgf8b (ENSOKIG00005026139)	dpcd (ENSOKIG00005026181)	ENSOKIG00005026202	poll (ENSOKIG00005026221)	wbp1lb (ENSOKIG00005026288) #16	as3mt (ENSOKIG00005026319)	CNNM2 (ENSOKIG00005026462) #19	nt5c2b (ENSOKIG00005026543)	inab (ENSOKIG00005027163) #22	ENSOKIG00005027173	taf5 (ENSOKIG00005027198) #23	atp5md (ENSOKIG00005027353)	pdcd11 (ENSOKIG00005027405) #25	zgc:175214 (ENSOKIG00005027745)	CALHM1 (ENSOKIG00005027776) #27	ITPRIP (ENSOKIG00005027784)	zp3c (ENSOKIG00005027791)	RAB40C (ENSOKIG00005027801)	ENSOKIG00005027822	mettl26 (ENSOKIG00005027834)	ENSOKIG00005027840	ENSOKIG00005027884	ENSOKIG00005027941	ENSOKIG00005028038
Huchen	MODERN SPECIES	484	ENSHHUG00000046369	ENSHHUG00000046303	ENSHHUG00000046299	RIMS1 (ENSHHUG00000046260)	ENSHHUG00000046257	cenpk (ENSHHUG00000046254)	lbx1b (ENSHHUG00000046240)	slc2a15b (ENSHHUG00000046232)	fgf8b (ENSHHUG00000046083)	dpcd (ENSHHUG00000046070)	poll (ENSHHUG00000046062)	wbp1lb (ENSHHUG00000046059) #16	as3mt (ENSHHUG00000046047)	CNNM2 (ENSHHUG00000046045) #19	nt5c2b (ENSHHUG00000046006)	inab (ENSHHUG00000046004) #22	ENSHHUG00000045998 #23
Salmoninae	ANCESTRAL SPECIES	64	ENSGT00940000155933.b.b	ENSGT00940000155134.z.f.a.b	ENSGT00940000155884.b.d	ENSGT00390000006243	ENSGT00940000164611.b	ENSGT00940000164095.b.a	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515.k.a	ENSGT00950000183109.c.a.a.a.b.a.a #16	ENSGT00940000158515.l	ENSGT00950000183109.c.a.a.a.b.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a.f	ENSGT00940000154418.a.a.b.c.b #22	ENSGT00940000153342.a.f #23	ENSGT00940000166377.g	ENSGT00940000153342.a.e.a.b #23	ENSGT00940000166377.h	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a.j #27	ENSGT01050000244827.D.b.b.b.c	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a	ENSGT00940000155559.a.b.o	ENSGT00950000183059.b.a.b.r.c	ENSGT00940000155103.a.b.kd.b
Salmoninae_a	ANCESTRAL SPECIES	33	ENSGT00940000162741.b	ENSGT00950000183029.B.j.e.b	ENSGT00940000155933.b.b.e.b	ENSGT00940000155134.z.f.a.b	ENSGT00940000155884.b.d	ENSGT00390000006243	ENSGT00940000164611.b	ENSGT00940000164095.b.a	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515.k.a	ENSGT00950000183109.c.a.a.a.b.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a.e	ENSGT00940000154418.a.a.b.c.b #22	ENSGT00940000153342.a.f #23	ENSGT00940000166377.g	ENSGT00940000153342.a.e.a.b #23	ENSGT00940000166377.h	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a.j #27	ENSGT01050000244827.D.b.b.b.c	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT00940000158979.e.b	ENSGT00940000167090	ENSGT00390000010750.a.q	ENSGT00940000155559.a.b.o	ENSGT00390000010750.a.r	ENSGT00940000155559.a.b.p
Salmo	ANCESTRAL SPECIES	37	ENSGT00940000154866.B.b.f	ENSGT01100000263476.A.b.a.b.a	ENSGT00950000183029.B.j.e.b.b	ENSGT00940000155933.b.b.e.a	ENSGT00940000155134.z.e.a	ENSGT00940000155884.b.d.b	ENSGT00390000006243.k	ENSGT00940000164611.b.a	ENSGT00940000164095.b.a.a	ENSGT00940000159518.b.f	ENSGT00390000014031.l	ENSGT00940000158515.k.a	ENSGT00950000183109.c.a.a.a.b.a.a #16	ENSGT00940000159034.t #19	ENSGT00940000163289.b.a.a.e	ENSGT00940000154418.a.a.b.c.b #22	ENSGT00940000153342.a.e.a.b #23	ENSGT00940000153342.a.f #23	ENSGT00940000166377.h	ENSGT00390000012228.l #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a.j #27	ENSGT01050000244827.D.b.b.b.c	ENSGT01030000234567.A.a.a.a.a.b.f.d	ENSGT00940000158979.e.b.b	ENSGT00940000167090.c	ENSGT00390000010750.a.q.c	ENSGT00940000155559.a.b.o.a	ENSGT00950000183059.b.a.b.r.c	ENSGT00940000155103.a.b.kd.a	ENSGT00940000155103.a.b.jd.a
Atlantic salmon	MODERN SPECIES	3	ENSSSAG00000006735	ENSSSAG00000006679	ENSSSAG00000005004	ENSSSAG00000000250	ENSSSAG00000000305	cenpk (ENSSSAG00000078834)	lbx1b (ENSSSAG00000092954)	ENSSSAG00000094147	ENSSSAG00000073607	fgf8b (ENSSSAG00000008393)	dpcd (ENSSSAG00000008388)	poll (ENSSSAG00000000450)	wbp1lb (ENSSSAG00000113488) #16	as3mt (ENSSSAG00000008326)	ENSSSAG00000008311 #19	inab (ENSSSAG00000104505) #22	nt5c2b (ENSSSAG00000000687)	ENSSSAG00000095552	taf5 (ENSSSAG00000004352) #23	usmg5 (ENSSSAG00000004194)	pdcd11 (ENSSSAG00000004225) #25	zgc:175214 (ENSSSAG00000103223)	CALHM1 (ENSSSAG00000116082) #27	ENSSSAG00000073615	zp3c (ENSSSAG00000073611)	ENSSSAG00000115135	ENSSSAG00000004177	ENSSSAG00000004172	ENSSSAG00000015438	ENSSSAG00000095986	ENSSSAG00000106547
River trout	MODERN SPECIES	5	ENSSTUG00000026730	ENSSTUG00000026742	ENSSTUG00000026751	ENSSTUG00000026821	RIMS1 (ENSSTUG00000026976)	ENSSTUG00000030783	cenpk (ENSSTUG00000030796)	lbx1b (ENSSTUG00000030824)	ENSSTUG00000030833	fgf8b (ENSSTUG00000030879)	dpcd (ENSSTUG00000030884)	poll (ENSSTUG00000030901)	wbp1lb (ENSSTUG00000030911) #16	CNNM2 (ENSSTUG00000030920) #19	nt5c2b (ENSSTUG00000030969)	inab (ENSSTUG00000031227) #22	taf5 (ENSSTUG00000031238) #23	atp5md (ENSSTUG00000031569)	pdcd11 (ENSSTUG00000031605) #25	zgc:175214 (ENSSTUG00000032184)	CALHM1 (ENSSTUG00000032228) #27	ITPRIP (ENSSTUG00000032233)	zp3c (ENSSTUG00000032247)	ENSSTUG00000032260	RAB40C (ENSSTUG00000032265)	wfikkn1 (ENSSTUG00000032281)	mettl26 (ENSSTUG00000032286)	ENSSTUG00000032410	ENSSTUG00000034475	ENSSTUG00000034534	ENSSTUG00000034567
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT01100000263476.A.b.a.b.a	ENSGT01100000263476.A.b.a.b.b.a.a	ENSGT00950000183029.B.j.e.b.c.a	ENSGT00940000155933.b.b.e.a	ENSGT01080000258962	ENSGT00940000155134.z.e	ENSGT00940000155884.b.c	ENSGT00390000006243.n	ENSGT00940000164611.b.c.a	ENSGT00940000164095.b.a	ENSGT00940000159518.b.h	ENSGT00390000014031.j	ENSGT00940000158515.k.a	ENSGT00950000183109.c.a.a.a.b.b.a #16	ENSGT00390000001742.a.n	ENSGT00940000154418.a.a.b.c.b #22	ENSGT00940000153342.a.f #23	ENSGT00940000166377.g	ENSGT00390000012228.m #25	ENSGT00940000166025.a.f	ENSGT01030000234610.b.a.b.a.i #27	ENSGT01050000244827.D.b.b.b.d	ENSGT01030000234567.A.a.a.a.a.b.f.f	ENSGT00940000158979.e.b.d	ENSGT00940000167090.e	ENSGT00390000010750.a.r	ENSGT00940000155559.a.b.p	ENSGT00950000183059.b.a.b.r.d.a.b	ENSGT00940000155103.a.b.jd.c	ENSGT00940000156983.a.a.p.b	ENSGT00940000163496.a.v.b.a.b
Oncorhynchus_a	ANCESTRAL SPECIES	51	ENSGT01100000263476.A.b.a.b.b.a.a	ENSGT00950000183029.B.j.e.b.c.a	ENSGT00940000155933.b.b.e.a	ENSGT01080000258962	ENSGT00940000155884.b.c	ENSGT00390000006243.n	ENSGT00940000164611.b.c.a	ENSGT00940000164095.b.a	ENSGT00940000159518.b.h	ENSGT00390000014031.j	ENSGT00940000158515.k.a	ENSGT00950000183109.c.a.a.a.b.b.a #16	ENSGT00390000001742.a.n	ENSGT00940000159034.r #19	ENSGT00940000163289.b.a.a.e	ENSGT00940000154418.a.a.b.c.b #22	ENSGT00940000153342.a.f #23	ENSGT00940000166377.g	ENSGT00390000012228.m #25	ENSGT00940000166025.a.f	ENSGT01030000234610.b.a.b.a.i #27	ENSGT01030000234567.A.a.a.a.a.b.f.f	ENSGT00940000158979.e.b.d	ENSGT00940000167090.e	ENSGT00390000010750.a.q.b	ENSGT00940000155559.a.b.p	ENSGT00950000183059.b.a.b.r.d.a.b	ENSGT00940000155103.a.b.kd.b	ENSGT00940000156983.a.a.p.a.a	ENSGT00940000156983.a.a.p.a.b	ENSGT00940000163496.a.v.b.a.b
Chinook salmon	MODERN SPECIES	11	ENSOTSG00005000304	septin3 (ENSOTSG00005000309)	atf7ip (ENSOTSG00005001409)	ENSOTSG00005001411	si:ch211-243a20.3 (ENSOTSG00005001412)	f8a (ENSOTSG00005001414)	emp1 (ENSOTSG00005001417)	fgf8b (ENSOTSG00005001420)	dpcd (ENSOTSG00005001424)	poll (ENSOTSG00005001427)	wbp1lb (ENSOTSG00005001429) #16	as3mt (ENSOTSG00005001433)	CNNM2 (ENSOTSG00005001577) #19	ENSOTSG00005001579	nt5c2b (ENSOTSG00005001590)	inab (ENSOTSG00005002024) #22	atp5md (ENSOTSG00005002029)	pdcd11 (ENSOTSG00005002044) #25	zgc:175214 (ENSOTSG00005002249)	ENSOTSG00005002253 #27	zp3c (ENSOTSG00005002257)	RAB40C (ENSOTSG00005002259)	wfikkn1 (ENSOTSG00005002262)	mettl26 (ENSOTSG00005002263)	ENSOTSG00005002278	ENSOTSG00005002315	ENSOTSG00005002858	ENSOTSG00005002868	ENSOTSG00005002911	sec23b (ENSOTSG00005002939)	gsg1l (ENSOTSG00005003027)
Coho salmon	MODERN SPECIES		ENSOKIG00005031804	RIMS1 (ENSOKIG00005031962)	ENSOKIG00005033433	ENSOKIG00005033446	cenpk (ENSOKIG00005033460)	lbx1b (ENSOKIG00005033488)	ENSOKIG00005033542	ENSOKIG00005033829	fgf8b (ENSOKIG00005033833)	dpcd (ENSOKIG00005033839)	poll (ENSOKIG00005033862)	wbp1lb (ENSOKIG00005033879) #16	as3mt (ENSOKIG00005033893)	CNNM2 (ENSOKIG00005034003) #19	nt5c2b (ENSOKIG00005034097)	inab (ENSOKIG00005034898) #22	taf5 (ENSOKIG00005034921) #23	atp5md (ENSOKIG00005035336)	pdcd11 (ENSOKIG00005035428) #25	zgc:175214 (ENSOKIG00005000032)	CALHM1 (ENSOKIG00005000061) #27	ENSOKIG00005000126	zp3c (ENSOKIG00005000136)	ENSOKIG00005000146	zp3c (ENSOKIG00005000155)	ENSOKIG00005000164	zp3c (ENSOKIG00005000171)	RAB40C (ENSOKIG00005000178)	wfikkn1 (ENSOKIG00005000184)	METTL26 (ENSOKIG00005000193)	ENSOKIG00005000280
Rainbow trout	MODERN SPECIES	8	ENSOMYG00000060658	ENSOMYG00000031469	ENSOMYG00000030981	ENSOMYG00000030782	cenpk (ENSOMYG00000030767)	lbx1b (ENSOMYG00000030762)	ENSOMYG00000030288	fgf8b (ENSOMYG00000069031)	dpcd (ENSOMYG00000030065)	poll (ENSOMYG00000030037)	wbp1lb (ENSOMYG00000030012) #16	as3mt (ENSOMYG00000029994)	ENSOMYG00000049904	nt5c2b (ENSOMYG00000012141)	ENSOMYG00000068185	inab (ENSOMYG00000012795) #22	taf5 (ENSOMYG00000012803) #23	atp5md (ENSOMYG00000012813)	pdcd11 (ENSOMYG00000012951) #25	zgc:175214 (ENSOMYG00000013756)	ENSOMYG00000013766	zp3c (ENSOMYG00000013792)	ENSOMYG00000013801	ENSOMYG00000013830	ENSOMYG00000013839	ENSOMYG00000066307	ENSOMYG00000013980	ENSOMYG00000014580	ENSOMYG00000073283	ENSOMYG00000014594	ENSOMYG00000054026
Huchen	MODERN SPECIES	1587														ENSHHUG00000032750 #19	nt5c2b (ENSHHUG00000032688)	inab (ENSHHUG00000032102) #22	taf5 (ENSHHUG00000032095) #23	atp5md (ENSHHUG00000032093)	pdcd11 (ENSHHUG00000032051) #25	zgc:175214 (ENSHHUG00000032045)	CALHM1 (ENSHHUG00000032040) #27	ENSHHUG00000032037	ENSHHUG00000032025	RAB40C (ENSHHUG00000032014)	wfikkn1 (ENSHHUG00000032012)	mettl26 (ENSHHUG00000032005)	ENSHHUG00000032002	ENSHHUG00000031987	ENSHHUG00000031979	ENSHHUG00000031975	ENSHHUG00000031969
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000154418.a.a.b.d #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000154418.a.a.b.d #22
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00940000154418.a.a.b.d #22
Oncorhynchus_a	ANCESTRAL SPECIES	38	ENSGT00940000155933.b.b.e.b	ENSGT00940000155134.z.f.a.b	ENSGT00940000155884.b.d	ENSGT00390000006243.m	ENSGT00940000164611.b.c.b	ENSGT00940000164095.b.b	ENSGT00940000159518.b.g	ENSGT00940000158515.l.a	ENSGT00390000014031.i	ENSGT00940000158515.k.b	ENSGT00940000158515.l.b	ENSGT00950000183109.c.a.a.a.b.b.b #16	ENSGT00390000001742.a.m	ENSGT00940000159034.q.a #19	ENSGT00940000163289.b.a.a.f	ENSGT00940000154418.a.a.b.d #22	ENSGT00940000166377.h	ENSGT00390000012228.n #25	ENSGT00940000166025.a.e	ENSGT01030000234610.b.a.b.a.j #27	ENSGT01050000244827.D.b.b.b.c	ENSGT01030000234567.A.a.a.a.a.b.f.e	ENSGT00940000158979.e.b.c	ENSGT00940000167090.f	ENSGT00390000010750.a.q.a	ENSGT00940000155559.a.b.o	ENSGT00950000183059.b.a.b.r.d.a.a	ENSGT00940000155103.a.b.jd.d	ENSGT00940000163496.a.v.b.a.a	ENSGT00940000157361.a.k	ENSGT00390000006916.c.g
Chinook salmon	MODERN SPECIES	25	ENSOTSG00005046876	ENSOTSG00005046875	neurl1aa (ENSOTSG00005046873) #29	ENSOTSG00005046872 #30	stn1 (ENSOTSG00005046865) #31	slkb (ENSOTSG00005046820) #33	dtd1 (ENSOTSG00005046814)	fgf8b (ENSOTSG00005046812)	ENSOTSG00005046811	dpcd (ENSOTSG00005046810)	poll (ENSOTSG00005046807)	wbp1lb (ENSOTSG00005046806) #16	as3mt (ENSOTSG00005046768)	CNNM2 (ENSOTSG00005046767) #19	nt5c2b (ENSOTSG00005046766)	inab (ENSOTSG00005046765) #22	ENSOTSG00005046763	taf5 (ENSOTSG00005046760) #23	atp5md (ENSOTSG00005046758)	pdcd11 (ENSOTSG00005046755) #25	zgc:175214 (ENSOTSG00005046754)	CALHM1 (ENSOTSG00005046753) #27	ENSOTSG00005046752	zp3c (ENSOTSG00005046751)	RAB40C (ENSOTSG00005046750)	wfikkn1 (ENSOTSG00005046748)	mettl26 (ENSOTSG00005046747)	ENSOTSG00005046740	ENSOTSG00005046736	ENSOTSG00005046735	ENSOTSG00005046733
Northern pike	MODERN SPECIES	8	ENSELUG00000004764	ENSELUG00000025992	RIMS1 (ENSELUG00000004662)	SMAP1 (ENSELUG00000004599)	cenpk (ENSELUG00000004572)	lbx1b (ENSELUG00000004561)	ENSELUG00000029821	slc2a15b (ENSELUG00000004537)	fgf8b (ENSELUG00000004508)	dpcd (ENSELUG00000004483)	poll (ENSELUG00000004410)	wbp1lb (ENSELUG00000004387) #16	as3mt (ENSELUG00000004368)	CNNM2 (ENSELUG00000004339) #19	nt5c2b (ENSELUG00000004308)	inab (ENSELUG00000004266) #22	taf5 (ENSELUG00000004248) #23	atp5md (ENSELUG00000004222)	pdcd11 (ENSELUG00000004211) #25	zgc:175214 (ENSELUG00000026896)	CALHM1 (ENSELUG00000004161) #27	MPV17L (ENSELUG00000004143)	bmerb1 (ENSELUG00000004115)	MARF1 (ENSELUG00000004071)	NDE1 (ENSELUG00000003962)	myh11a (ENSELUG00000003922)	fopnl (ENSELUG00000003859)	ENSELUG00000003827	coq7 (ENSELUG00000003765)	notum2 (ENSELUG00000003699)	rps15a (ENSELUG00000003667)
Otomorpha	ANCESTRAL SPECIES	191	ENSGT01030000234532.A.a.a.b.j.b	ENSGT00940000154866.B.b	ENSGT00950000183029.B.j.h	ENSGT00940000155933.b.b	ENSGT00940000155134.z	ENSGT00390000006243	ENSGT00940000164611.b	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377.f	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT00940000166025.b	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT01050000244827.D.b.b.a	ENSGT00940000163896	ENSGT00940000155351	ENSGT00530000064714 #37	ENSGT00390000018550 #36	ENSGT00940000168136	ENSGT00940000156184.b #33
Clupeiformes	ANCESTRAL SPECIES	203					ENSGT00950000183029.B.i.a	ENSGT00940000155933.b.b	ENSGT00390000006243	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00940000153342.a #23	ENSGT00940000166377.f	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT01030000234610.b.a.b.a #27	ENSGT01050000244827.D.b.b.b	ENSGT00980000198902	ENSGT00940000156184.a #33	ENSGT00390000000909 #31	ENSGT00940000157732.f.a #30	ENSGT00940000156696.B #29	ENSGT00530000063534.b	ENSGT01030000234563.b.a.b.a.b.a	ENSGT01030000234563.b.a.b.a.a.c.a	ENSGT00390000000483.a.b
Denticle herring	MODERN SPECIES	13	dtd1 (ENSDCDG00000033332)	SLC24A3 (ENSDCDG00000033338)	RIN2 (ENSDCDG00000033343)	eef1a1b (ENSDCDG00000033347)	ENSDCDG00000033350	RIMS1 (ENSDCDG00000033416)	cenpk (ENSDCDG00000034131)	slc2a15b (ENSDCDG00000034132)	fgf8b (ENSDCDG00000034133)	dpcd (ENSDCDG00000034135)	poll (ENSDCDG00000034136)	wbp1lb (ENSDCDG00000034138) #16	as3mt (ENSDCDG00000034141)	CNNM2 (ENSDCDG00000034145) #19	nt5c2b (ENSDCDG00000034168)	inab (ENSDCDG00000034284) #22	taf5 (ENSDCDG00000034292) #23	atp5md (ENSDCDG00000034297)	pdcd11 (ENSDCDG00000034303) #25	zgc:175214 (ENSDCDG00000034308)	CALHM1 (ENSDCDG00000034310) #27	ITPRIP (ENSDCDG00000034311)	ENSDCDG00000034313	slkb (ENSDCDG00000034389) #33	stn1 (ENSDCDG00000034767) #31	SH3PXD2A (ENSDCDG00000034769) #30	neurl1aa (ENSDCDG00000034775) #29	cfap58 (ENSDCDG00000034776)	ENSDCDG00000034780	ENSDCDG00000034788	ENSDCDG00000034790
Atlantic herring	MODERN SPECIES	16	ENSCHAG00000008569	RIMS1 (ENSCHAG00000008981)	ENSCHAG00000011039	ENSCHAG00000011087	ENSCHAG00000013425	ENSCHAG00000013436	lbx1b (ENSCHAG00000013543)	slc2a15b (ENSCHAG00000013573)	fgf8b (ENSCHAG00000013783)	dpcd (ENSCHAG00000013912)	poll (ENSCHAG00000013920)	wbp1lb (ENSCHAG00000013931) #16	as3mt (ENSCHAG00000013938)	CNNM2 (ENSCHAG00000014012) #19	nt5c2b (ENSCHAG00000002738)	inab (ENSCHAG00000005685) #22	taf5 (ENSCHAG00000005692) #23	atp5md (ENSCHAG00000005836)	pdcd11 (ENSCHAG00000005871) #25	zgc:175214 (ENSCHAG00000006202)	CALHM1 (ENSCHAG00000006210) #27	ITPRIP (ENSCHAG00000006229)	ENSCHAG00000006235	slkb (ENSCHAG00000006278) #33	stn1 (ENSCHAG00000006314) #31	SH3PXD2A (ENSCHAG00000006340) #30	slkb (ENSCHAG00000006522) #33	neurl1aa (ENSCHAG00000007932) #29	cfap58 (ENSCHAG00000007998)	ENSCHAG00000008079	ENSCHAG00000008187
Otophysi	ANCESTRAL SPECIES	201	ENSGT00940000164127.b	ENSGT00950000183029.B.i.a	ENSGT00950000183029.B.j.h	ENSGT00940000155933.b.b	ENSGT00940000155134.z	ENSGT00390000006243	ENSGT00940000164611.b	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22
Characiphysae	ANCESTRAL SPECIES	110	ENSGT00940000159832.m	ENSGT00940000159832.n	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00390000006243	ENSGT00940000155134.z	ENSGT00940000155933.b.b	ENSGT00950000183029.B.i.a.a	ENSGT00940000164127.b	ENSGT00940000155353.a.a.b	ENSGT00940000160127.h	ENSGT00940000157735	ENSGT00530000063106.C	ENSGT00390000013790	ENSGT00390000005954	ENSGT00390000001134.a.b	ENSGT01030000234518.C.a.b.a.b.b	ENSGT00950000182999.b.b	ENSGT00950000183009.eb
Channel catfish	MODERN SPECIES	18	pnpla4 (ENSIPUG00000022785)	sts (ENSIPUG00000022779)	anos1 (ENSIPUG00000022769)	ENSIPUG00000022766	ENSIPUG00000022753	ENSIPUG00000022748	slc2a15b (ENSIPUG00000022730)	fgf8b (ENSIPUG00000022725)	dpcd (ENSIPUG00000022713)	poll (ENSIPUG00000022704)	wbp1lb (ENSIPUG00000022700) #16	ENSIPUG00000022695	as3mt (ENSIPUG00000022683)	CNNM2 (ENSIPUG00000022677) #19	nt5c2b (ENSIPUG00000022637)	ina (ENSIPUG00000022635) #22	ENSIPUG00000022629	ENSIPUG00000022620	lbx1b (ENSIPUG00000022616)	cenpk (ENSIPUG00000022610)	RIMS1 (ENSIPUG00000022460)	ENSIPUG00000022429	eef1a1b (ENSIPUG00000022421)	ENSIPUG00000022396	itga6b (ENSIPUG00000022343)	dlx2b (ENSIPUG00000022337)	metap1d (ENSIPUG00000022323)	dis3 (ENSIPUG00000022296)	bora (ENSIPUG00000022284)	mzt1 (ENSIPUG00000022271)	DACH1 (ENSIPUG00000022234)
Characiphysae_b	ANCESTRAL SPECIES	143	ENSGT00940000159942.a.c.a	ENSGT00940000159832.m	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22
Characoidei	ANCESTRAL SPECIES	154	ENSGT00940000159942.a.c.a	ENSGT00940000159832.m	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00390000014380.h.b.a.b.b.c
Mexicana tetra	MODERN SPECIES	3	ENSAMXG00000030734	ENSAMXG00000039391	arhgef7b (ENSAMXG00000035958)	ENSAMXG00000018383	lipt1 (ENSAMXG00000025104)	ENSAMXG00000040244	PNPLA6 (ENSAMXG00000018423)	map2k7 (ENSAMXG00000018484)	PKN1 (ENSAMXG00000018504)	si:ch211-214c7.5 (ENSAMXG00000018514)	ENSAMXG00000018526	mcoln1a (ENSAMXG00000018550)	trappc5 (ENSAMXG00000041497)	ENSAMXG00000039354	ENSAMXG00000032316	inab (ENSAMXG00000018601) #22	ENSAMXG00000018610	ENSAMXG00000038204	ENSAMXG00000035284	ddx39aa (ENSAMXG00000015256)	EVI5L (ENSAMXG00000018638)	ENSAMXG00000018641	ENSAMXG00000018646	emp1 (ENSAMXG00000037610)	f8a (ENSAMXG00000038777)	si:ch211-243a20.3 (ENSAMXG00000037723)	grin2bb (ENSAMXG00000018685)	ENSAMXG00000031064	nlgn4xa (ENSAMXG00000018861)	pudp (ENSAMXG00000034340)	ENSAMXG00000036752
Red-bellied piranha	MODERN SPECIES	197					ENSPNAG00000005236	ENSPNAG00000010002	ENSPNAG00000001360	slc2a15b (ENSPNAG00000010080)	fgf8b (ENSPNAG00000010197)	dpcd (ENSPNAG00000010230)	poll (ENSPNAG00000010238)	wbp1lb (ENSPNAG00000010243) #16	as3mt (ENSPNAG00000010264)	CNNM2 (ENSPNAG00000010318) #19	nt5c2b (ENSPNAG00000006807)	inab (ENSPNAG00000010378) #22	ENSPNAG00000010387	ENSPNAG00000001418	ENSPNAG00000010652	ENSPNAG00000010664	ENSPNAG00000001425	rab3da (ENSPNAG00000010705)	pld6 (ENSPNAG00000010713)	cnn1a (ENSPNAG00000010750)	raph1b (ENSPNAG00000010883)	spp2 (ENSPNAG00000010895)	alg11 (ENSPNAG00000007163)	cpb2 (ENSPNAG00000010990)	zc3h13 (ENSPNAG00000011008)	tm9sf2 (ENSPNAG00000001502)	zic2b (ENSPNAG00000011062)
Electric eel	MODERN SPECIES	8	pibf1 (ENSEEEG00000013207)	ENSEEEG00000013385	gpalpp1 (ENSEEEG00000013387)	gtf2f2a (ENSEEEG00000013391)	tpt1 (ENSEEEG00000013398)	zgc:172122 (ENSEEEG00000013400)	ENSEEEG00000013402	slc2a15b (ENSEEEG00000013405)	fgf8b (ENSEEEG00000013407)	dpcd (ENSEEEG00000013408)	poll (ENSEEEG00000013410)	wbp1lb (ENSEEEG00000013411) #16	as3mt (ENSEEEG00000013414)	CNNM2 (ENSEEEG00000013418) #19	nt5c2b (ENSEEEG00000013421)	inab (ENSEEEG00000013453) #22	ENSEEEG00000013455	ENSEEEG00000013457	ENSEEEG00000013458	ENSEEEG00000013461	ENSEEEG00000013465	ENSEEEG00000013534	ENSEEEG00000013535	lbx1b (ENSEEEG00000013536)	cenpk (ENSEEEG00000013537)	RIMS1 (ENSEEEG00000013538)	ENSEEEG00000013540
Cyprinoidei	ANCESTRAL SPECIES	22	ENSGT00940000155353.a.a.b	ENSGT00940000164127.b	ENSGT00950000183029.B.i.a	ENSGT00950000183029.B.j.h	ENSGT00940000155933.b.b	ENSGT00940000155134.z	ENSGT00390000006243	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #22	ENSGT00440000033720.a.a.b	ENSGT00940000161153	ENSGT00940000162022	ENSGT00940000165158.b	ENSGT00390000014753	ENSGT00940000156607.a.a	ENSGT00940000159832.m	ENSGT00940000159942.a.c.a	ENSGT00940000161628	ENSGT00940000154344.b	ENSGT00940000164022	ENSGT00940000167264	ENSGT00950000182832.B	ENSGT00940000163614	ENSGT00940000165278
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	378	ENSGT00940000157735.a	ENSGT00940000160127.h.b	ENSGT00940000155353.a.a.b.b	ENSGT00940000164127.b.a	ENSGT00940000155933.b.b.b	ENSGT00940000155134.z.b	ENSGT00940000164611.b.l.a	ENSGT00940000159518.b.a	ENSGT00940000159518.b.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b.c #16	ENSGT00390000001742.a.h	ENSGT00940000159034.jb.a #19	ENSGT00940000163289.b.a.a.b	ENSGT00940000154418.a.a.b.e #22	ENSGT00440000033720.a.a.b.b	ENSGT00940000161153.k	ENSGT01060000249735
Goldfish	MODERN SPECIES	18	ENSCARG00000013196	ENSCARG00000013212	RIMS1 (ENSCARG00000013343)	cenpk (ENSCARG00000014485)	lbx1b (ENSCARG00000014488)	slc2a15b (ENSCARG00000014504)	fgf8b (ENSCARG00000014627)	dpcd (ENSCARG00000014642)	poll (ENSCARG00000014649)	wbp1lb (ENSCARG00000014665) #16	ENSCARG00000014673	as3mt (ENSCARG00000014687)	CNNM2 (ENSCARG00000014756) #19	nt5c2b (ENSCARG00000014795)	ENSCARG00000015019	inab (ENSCARG00000015024) #22	anos1a (ENSCARG00000015038)	STS (ENSCARG00000015218)	ENSCARG00000015282	ENSCARG00000015287	ENSCARG00000015295	ENSCARG00000015315	ENSCARG00000015342	ENSCARG00000015345	sh3gl2a (ENSCARG00000015356)	ENSCARG00000015387	ENSCARG00000015408	trmo (ENSCARG00000015481)	anp32b (ENSCARG00000015489)	coro2aa (ENSCARG00000015502)	uso1 (ENSCARG00000015730)
Cyprininae_a	ANCESTRAL SPECIES	256	ENSGT00940000155353.a.a.b.a	ENSGT00940000164127.b.b	ENSGT00950000183029.B.i.a	ENSGT00940000155933.b.b.a	ENSGT00940000155134.z.a	ENSGT00390000006243	ENSGT00940000164611.b.l.b	ENSGT00940000164095.b	ENSGT00940000159518.b.b	ENSGT00390000014031.c	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b.c #16	ENSGT00390000001742.a.h	ENSGT00940000159034.jb.a #19	ENSGT00940000163289.b.a.a.b	ENSGT00940000154418.a.a.b.e #22	ENSGT00440000033720.a.a.b.b	ENSGT00940000161153.k	ENSGT01060000249735	ENSGT00940000156607.a.a.kb.a
Common carp reference	MODERN SPECIES	27	ENSCCRG00000025690	eef1a1b (ENSCCRG00000068272)	ENSCCRG00000060865	ENSCCRG00000074168	cenpk (ENSCCRG00000079032)	lbx1b (ENSCCRG00000012953)	slc2a15b (ENSCCRG00000032469)	fgf8b (ENSCCRG00000036243)	poll (ENSCCRG00000075739)	dpcd (ENSCCRG00000036244)	wbp1lb (ENSCCRG00000082236) #16	as3mt (ENSCCRG00000068214)	ENSCCRG00000047640 #19	ENSCCRG00000068233	nt5c2b (ENSCCRG00000030371)	inab (ENSCCRG00000012948) #22	anos1a (ENSCCRG00000012925)	ENSCCRG00000059369	ENSCCRG00000016112	ENSCCRG00000069305	nlgn4xa (ENSCCRG00000057363)	ENSCCRG00000008504	ENSCCRG00000053953	MXRA5 (ENSCCRG00000068764)	gyg2 (ENSCCRG00000012302)	cd99 (ENSCCRG00000012294)	DHRSX (ENSCCRG00000063610)	creb1a (ENSCCRG00000036656)	chmp2bb (ENSCCRG00000066356)	ENSCCRG00000080823	cldng (ENSCCRG00000077360)
Golden-line barbel	MODERN SPECIES	333	eef1a1b (ENSSGRG00000032231)	ENSSGRG00000033034	RIMS1 (ENSSGRG00000033037)	cenpk (ENSSGRG00000033140)	lbx1b (ENSSGRG00000033141)	slc2a15b (ENSSGRG00000033142)	fgf8b (ENSSGRG00000033143)	dpcd (ENSSGRG00000033144)	poll (ENSSGRG00000033145)	poll (ENSSGRG00000033146)	ENSSGRG00000033147	wbp1lb (ENSSGRG00000033149) #16	as3mt (ENSSGRG00000033150)	CNNM2 (ENSSGRG00000033152) #19	nt5c2b (ENSSGRG00000033166)	inab (ENSSGRG00000034984) #22	anos1a (ENSSGRG00000034985)	STS (ENSSGRG00000034986)	ENSSGRG00000034989	pnpla4 (ENSSGRG00000034991)	pudp (ENSSGRG00000034995)	nlgn4xa (ENSSGRG00000034997)
Cyprininae	ANCESTRAL SPECIES	299												ENSGT00950000183109.c.a.a.a.b.d #16	ENSGT00390000001742.a.g.a	ENSGT00940000159034.jb.b #19	ENSGT00940000163289.b.a.a.a	ENSGT00940000154418.a.a.b.f #22	ENSGT00440000033720.a.a.b.a	ENSGT00940000161153.l	ENSGT00940000162022	ENSGT00390000014753.d	ENSGT00940000156607.a.a.kb.a	ENSGT00940000159832.m.b	ENSGT00940000159942.a.c.a.b	ENSGT00940000165158.b	ENSGT00390000014753.c	ENSGT00940000156607.a.a.kb.b	ENSGT00940000159832.m.a	ENSGT00940000159942.a.c.a.a	ENSGT00940000161628	ENSGT00940000154344.b	ENSGT00940000162345.d
Cyprininae_a	ANCESTRAL SPECIES	178	ENSGT00390000013790.c	ENSGT00530000063106.C.m	ENSGT00940000157735.a	ENSGT00940000160127.h.b	ENSGT00940000155353.a.a.b.b	ENSGT00940000164127.b.a	ENSGT00940000155933.b.b.b	ENSGT00940000155134.z.b	ENSGT00940000164611.b.l.a	ENSGT00940000159518.b.a	ENSGT00390000014031.d	ENSGT00950000183109.c.a.a.a.b.d #16	ENSGT00390000001742.a.g.a	ENSGT00940000159034.jb.b #19	ENSGT00940000163289.b.a.a.a	ENSGT00940000154418.a.a.b.f #22	ENSGT00440000033720.a.a.b.a	ENSGT00940000161153.l	ENSGT00940000162022	ENSGT00390000014753.d	ENSGT00940000165158.b	ENSGT00390000014753.c	ENSGT00940000156607.a.a.kb.b	ENSGT00940000159832.m.a	ENSGT00940000159942.a.c.a.a	ENSGT00940000159832.m.b	ENSGT00940000159942.a.c.a.b	ENSGT00940000161628	ENSGT00940000154344.b	ENSGT00940000161561	ENSGT00440000039314.a
Common carp reference	MODERN SPECIES	22	dlx2b (ENSCCRG00000062845)	itga6b (ENSCCRG00000016674)	ENSCCRG00000079997	eef1a1b (ENSCCRG00000032645)	ENSCCRG00000077062	ENSCCRG00000070376	ENSCCRG00000012958	cenpk (ENSCCRG00000077695)	lbx1b (ENSCCRG00000000446)	fgf8b (ENSCCRG00000073156)	dpcd (ENSCCRG00000000422)	wbp1lb (ENSCCRG00000002551) #16	ENSCCRG00000064278	ENSCCRG00000002508 #19	nt5c2b (ENSCCRG00000058145)	inab (ENSCCRG00000002487) #22	anos1a (ENSCCRG00000033788)	ENSCCRG00000066787	pudp (ENSCCRG00000037755)	ENSCCRG00000055867	nlgn4xa (ENSCCRG00000032014)	ENSCCRG00000076414	ENSCCRG00000055986	PRKX (ENSCCRG00000073593)	MXRA5 (ENSCCRG00000054307)	ENSCCRG00000064390	creb1a (ENSCCRG00000078775)	chmp2bb (ENSCCRG00000036630)	ENSCCRG00000057171	cldng (ENSCCRG00000037509)	ENSCCRG00000068284
Golden-line barbel	MODERN SPECIES	4384																inab (ENSSGRG00000002023) #22
Goldfish	MODERN SPECIES		ENSCARG00000011440	mzt1 (ENSCARG00000000109)	bora (ENSCARG00000000114)	dlx2b (ENSCARG00000000132)	itga6b (ENSCARG00000000507)	ENSCARG00000001149	eef1a1b (ENSCARG00000001165)	ENSCARG00000001176	ENSCARG00000001201	RIMS1 (ENSCARG00000001479)	lbx1b (ENSCARG00000002215)	fgf8b (ENSCARG00000002229)	wbp1lb (ENSCARG00000002263) #16	CNNM2 (ENSCARG00000002274) #19	nt5c2b (ENSCARG00000002368)	inab (ENSCARG00000002533) #22	anos1a (ENSCARG00000002539)	ENSCARG00000002552	ENSCARG00000002561	pudp (ENSCARG00000002566)	nlgn4xa (ENSCARG00000002582)	phox2ba (ENSCARG00000002604)	exosc9 (ENSCARG00000002615)	ENSCARG00000002664	ENSCARG00000002936	ENSCARG00000004238	TYRP1 (ENSCARG00000004248)	rbm47 (ENSCARG00000004309)	lap3 (ENSCARG00000004374)	clockb (ENSCARG00000005172)	kitb (ENSCARG00000005208)
Zebrafish	MODERN SPECIES		itga6b (ENSDARG00000069946)	ENSDARG00000074575	eef1a1b (ENSDARG00000069951)	ENSDARG00000069953	ENSDARG00000078902	cenpk (ENSDARG00000039616)	lbx1b (ENSDARG00000018611)	slc2a15b (ENSDARG00000053269)	fgf8b (ENSDARG00000039615)	dpcd (ENSDARG00000060501)	poll (ENSDARG00000039613)	wbp1lb (ENSDARG00000029751) #16	as3mt (ENSDARG00000027572)	CNNM2 (ENSDARG00000078733) #19	nt5c2b (ENSDARG00000058231)	inab (ENSDARG00000053248) #22	anos1a (ENSDARG00000012896)	ENSDARG00000100996	STS (ENSDARG00000053241)	pnpla4 (ENSDARG00000069834)	pudp (ENSDARG00000027826)	nlgn4xa (ENSDARG00000079455)	ENSDARG00000078810	PRKX (ENSDARG00000060716)	MXRA5 (ENSDARG00000074815)	gyg2 (ENSDARG00000033380)	cd99 (ENSDARG00000051975)	dhrsx (ENSDARG00000079280)	creb1a (ENSDARG00000053586)	chmp2bb (ENSDARG00000002190)	ENSDARG00000053580
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	94	ENSGT00940000155134.z	ENSGT00940000155884.a.a	ENSGT00390000006243	ENSGT00940000158698.l.b	ENSGT00940000164611	ENSGT00940000164095.b	ENSGT00940000159518.b	ENSGT00390000014031	ENSGT00940000158515	ENSGT00950000183109.c.a.a.a.b #16	ENSGT00940000155588.b #17	ENSGT00390000015849 #18	ENSGT00390000001742.a	ENSGT00940000159034 #19	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.c #22	ENSGT00940000158034 #21	ENSGT00940000153342.a #23	ENSGT00940000166377	ENSGT00390000012228 #25	ENSGT00940000166025.a	ENSGT00940000166025.b	ENSGT01030000234610.b.a.a #26	ENSGT01030000234610.b.a.b.a #27	ENSGT01030000234610.b.a.b.b #28	ENSGT01050000244827.D.b.b.a	ENSGT00940000155351	ENSGT00940000163896	ENSGT00530000064714 #37	ENSGT00390000018550 #36	ENSGT00940000168136
Asian bonytongue	MODERN SPECIES	7	b3gat2 (ENSSFOG00015003295)	smap1 (ENSSFOG00015003315)	cenpk (ENSSFOG00015003362)	tlx1 (ENSSFOG00015030414)	lbx1b (ENSSFOG00015003483)	slc2a15b (ENSSFOG00015003512)	fgf8b (ENSSFOG00015032385)	dpcd (ENSSFOG00015003562)	poll (ENSSFOG00015003586)	wbp1lb (ENSSFOG00015003615) #16	cyp17a1 (ENSSFOG00015003625) #17	borcs7 (ENSSFOG00015003655) #18	as3mt (ENSSFOG00015003668)	CNNM2 (ENSSFOG00015003692) #19	nt5c2b (ENSSFOG00015003738)	inab (ENSSFOG00015003824) #22	pcgf6 (ENSSFOG00015003847) #21	taf5 (ENSSFOG00015003852) #23	atp5md (ENSSFOG00015003866)	pdcd11 (ENSSFOG00015003881) #25	zgc:175214 (ENSSFOG00015003933)	CALHM1 (ENSSFOG00015003972) #27	ITPRIP (ENSSFOG00015003993)	zp3c (ENSSFOG00015004006)	ENSSFOG00015033328	slkb (ENSSFOG00015004091) #33	stn1 (ENSSFOG00015004107) #31	SH3PXD2A (ENSSFOG00015004121) #30	neurl1aa (ENSSFOG00015004224) #29	cfap58 (ENSSFOG00015004292)	ENSSFOG00015004363
P. kingsleyae	MODERN SPECIES	116	B3GAT2 (ENSPKIG00000001664)	smap1 (ENSPKIG00000001603)	cenpk (ENSPKIG00000001546)	TLX1 (ENSPKIG00000001529)	ENSPKIG00000001513	slc2a15b (ENSPKIG00000001451)	fgf8b (ENSPKIG00000001399)	dpcd (ENSPKIG00000001362)	poll (ENSPKIG00000001318)	wbp1lb (ENSPKIG00000001289) #16	cyp17a1 (ENSPKIG00000001260) #17	borcs7 (ENSPKIG00000001240) #18	as3mt (ENSPKIG00000001196)	CNNM2 (ENSPKIG00000001150) #19	nt5c2b (ENSPKIG00000001096)	inab (ENSPKIG00000001077) #22	pcgf6 (ENSPKIG00000001037) #21	atp5md (ENSPKIG00000001009)	pdcd11 (ENSPKIG00000000973) #25	zgc:175214 (ENSPKIG00000000952)	CALHM1 (ENSPKIG00000000936) #27	ENSPKIG00000000907	ENSPKIG00000000873	slkb (ENSPKIG00000000791) #33	stn1 (ENSPKIG00000000721) #31	SH3PXD2A (ENSPKIG00000000694) #30	neurl1aa (ENSPKIG00000000663) #29	cfap58 (ENSPKIG00000000602)	ENSPKIG00000000522	ENSPKIG00000000471	caly (ENSPKIG00000000434)
Osteoglossiformes	ANCESTRAL SPECIES	115	ENSGT00950000183029.B.i.a	ENSGT01050000244827.E.e.b	ENSGT00940000163653	ENSGT00940000155933.a	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.b	ENSGT00390000009155	ENSGT00940000158698.l.a	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00940000163289.b.a.b	ENSGT00940000154418.a.a.d #22
P. kingsleyae	MODERN SPECIES	11	ddx43 (ENSPKIG00000002941)	ENSPKIG00000002858	RIMS1 (ENSPKIG00000002723)	asrgl1 (ENSPKIG00000002669)	OGFRL1 (ENSPKIG00000002645)	b3gat2 (ENSPKIG00000002632)	smap1 (ENSPKIG00000002589)	tlx1 (ENSPKIG00000002563)	ENSPKIG00000002553	slc2a15a (ENSPKIG00000002478)	fgf8a (ENSPKIG00000002430)	fbxw4 (ENSPKIG00000002375)	WBP1L (ENSPKIG00000002346) #16	cnnm2a (ENSPKIG00000002307) #19	nt5c2a (ENSPKIG00000002181)	INA (ENSPKIG00000002123) #22	taf5 (ENSPKIG00000002076) #23	ENSPKIG00000002038	calhm2.1 (ENSPKIG00000002024) #26	CALHM1 (ENSPKIG00000002001) #27	CALHM3 (ENSPKIG00000001981) #28	itprip (ENSPKIG00000001965)	gsto2 (ENSPKIG00000001946)	ENSPKIG00000001925	ENSPKIG00000001908 #37	sfr1 (ENSPKIG00000001887) #36	ENSPKIG00000001737	SLK (ENSPKIG00000001638) #33	INSYN2A (ENSPKIG00000001600)	ENSPKIG00000001535	ADAM12 (ENSPKIG00000001470)
Spotted gar	MODERN SPECIES	671	KAZALD1 (ENSLOCG00000011635)	tlx1 (ENSLOCG00000011642)	ENSLOCG00000011648	BTRC (ENSLOCG00000011652)	slc2a15a (ENSLOCG00000011671)	fgf8b (ENSLOCG00000011679)	fbxw4 (ENSLOCG00000011687)	dpcd (ENSLOCG00000011698)	poll (ENSLOCG00000011706)	wbp1la (ENSLOCG00000011721) #16	cyp17a1 (ENSLOCG00000011729) #17	borcs7 (ENSLOCG00000011739) #18	as3mt (ENSLOCG00000011748)	cnnm2a (ENSLOCG00000011756) #19	nt5c2b (ENSLOCG00000011770)	inab (ENSLOCG00000011782) #22	pcgf6 (ENSLOCG00000011792) #21	taf5 (ENSLOCG00000011799) #23	atp5md (ENSLOCG00000011809)	pdcd11 (ENSLOCG00000011818) #25	zgc:175214 (ENSLOCG00000011833)	calhm2.1 (ENSLOCG00000011840) #26	CALHM1 (ENSLOCG00000011849) #27	CALHM3 (ENSLOCG00000011856) #28	itprip (ENSLOCG00000011865)	gsto2 (ENSLOCG00000011872)	CFAP43 (ENSLOCG00000011880) #37	sfr1 (ENSLOCG00000011891) #36	ENSLOCG00000011901	ENSLOCG00000011911	slka (ENSLOCG00000011943) #33
Reedfish	MODERN SPECIES	10	tlx1 (ENSECRG00000007650)	LBX1 (ENSECRG00000007641)	BTRC (ENSECRG00000007567)	slc2a15a (ENSECRG00000007530)	fgf8b (ENSECRG00000007513)	fbxw4 (ENSECRG00000007486)	dpcd (ENSECRG00000007473)	poll (ENSECRG00000007457)	wbp1la (ENSECRG00000007447) #16	cyp17a1 (ENSECRG00000007434) #17	borcs7 (ENSECRG00000007423) #18	as3mt (ENSECRG00000007410)	cnnm2a (ENSECRG00000007397) #19	ENSECRG00000007387 #19	nt5c2b (ENSECRG00000007361)	inab (ENSECRG00000007342) #22	zgc:175214 (ENSECRG00000007332)	pxmp2 (ENSECRG00000007325)	ENSECRG00000007317	ENSECRG00000007314	ENSECRG00000007304	ENSECRG00000007296	calhm2.1 (ENSECRG00000007287) #26	CALHM1 (ENSECRG00000007283) #27	CALHM3 (ENSECRG00000007274) #28	itprip (ENSECRG00000007263)	gsto2 (ENSECRG00000007253)	ENSECRG00000007238 #37	sfr1 (ENSECRG00000007226) #36	ENSECRG00000007182	slka (ENSECRG00000007144) #33
Elephant shark	MODERN SPECIES	2408																INA (ENSCMIG00000006514) #22	ENSCMIG00000006516 ##22	PCGF6 (ENSCMIG00000006517) #21
Gnathostomata	ANCESTRAL SPECIES	200															ENSGT00940000161685.A.b	ENSGT00940000154418.a.b ##22	ENSGT00950000182869.e.a.a	ENSGT00940000155540.b.b	ENSGT00940000162682.A.a.b	ENSGT00940000154628.B	ENSGT00940000154628.C	ENSGT00940000157372	ENSGT00390000014320	ENSGT00940000158184	ENSGT01030000234543.D	ENSGT00940000158930	ENSGT00950000182937.A.a	ENSGT00390000014666.b
Euteleostomi	ANCESTRAL SPECIES	1405															ENSGT00940000161685.A.b	ENSGT00940000154418.a.b ##22
Actinopterygii	ANCESTRAL SPECIES	1178															ENSGT00940000161685.A.b	ENSGT00940000154418.a.b ##22
Neopterygii	ANCESTRAL SPECIES	962															ENSGT00940000161685.A.b	ENSGT00940000154418.a.b ##22
Osteoglossocephalai	ANCESTRAL SPECIES	194	ENSGT00940000154909.b.a	ENSGT00940000154909.a.b	ENSGT01030000234522.C.d.b	ENSGT00940000165064.a	ENSGT00390000008694.b.b	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b.ib	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a	ENSGT00940000154909.a.a	ENSGT00940000154909.b.b	ENSGT00940000165076.a	ENSGT00730000113357	ENSGT00940000157734	ENSGT00940000154418.a.b ##22
Osteoglossiformes	ANCESTRAL SPECIES	45	ENSGT00940000155332.B	ENSGT00940000157905	ENSGT00390000001442	ENSGT00940000158207.z	ENSGT00940000158944	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000165064.a	ENSGT00390000008694.b.b.e	ENSGT00940000159105.e	ENSGT01030000234527.A.a.b.a.a.b	ENSGT00390000013415.a.b.ib	ENSGT00940000154909.b.a.a	ENSGT00940000165076.a	ENSGT00730000113357	ENSGT00940000157734	ENSGT00940000154418.a.b ##22	ENSGT00940000156208.i.a	ENSGT00550000075141	ENSGT00390000008529	ENSGT00940000164254	ENSGT00820000127055.b.b	ENSGT00940000159598	ENSGT00940000154702.a.a	ENSGT00940000159361	ENSGT00390000016790	ENSGT00940000158942.b	ENSGT00940000161861	ENSGT00950000183203.c.a.e	ENSGT01030000234627.a.b.a.b.a	ENSGT00940000153786.p	ENSGT00940000159783
Asian bonytongue	MODERN SPECIES	8	ENSSFOG00015024521	EMB (ENSSFOG00015001833)	cplx4a (ENSSFOG00015001837)	ENSSFOG00015001860	tmem230b (ENSSFOG00015002001)	adra1aa (ENSSFOG00015002035)	DPYSL2 (ENSSFOG00015002065)	bnip3la (ENSSFOG00015002111)	ENSSFOG00015030619	LRRTM4 (ENSSFOG00015002241)	LRRTM4 (ENSSFOG00015002259)	vsig8b (ENSSFOG00015002310)	ENSSFOG00015026363	dock5 (ENSSFOG00015002355)	ENSSFOG00015031067	NEFM (ENSSFOG00015027864) ##22	neflb (ENSSFOG00015025547)	ddx51 (ENSSFOG00015002636)	CABIN1 (ENSSFOG00015002741)	tbx16 (ENSSFOG00015002886)	crkl (ENSSFOG00015002929)	KLHL22 (ENSSFOG00015025529)	TMEM132C (ENSSFOG00015033275)	slc15a4 (ENSSFOG00015002952)	GLT1D1 (ENSSFOG00015003005)	TMEM132D (ENSSFOG00015003017)	fzd10 (ENSSFOG00015003091)	SLC46A2 (ENSSFOG00015003114)	RIMBP2 (ENSSFOG00015032405)	STX2 (ENSSFOG00015003146)	ENSSFOG00015007129
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	229												LRRTM4 (ENSPKIG00000021893)	ENSPKIG00000021902	vsig8b (ENSPKIG00000021915)	dock5 (ENSPKIG00000021951)	NEFM (ENSPKIG00000022006) ##22	neflb (ENSPKIG00000022019)	ENSPKIG00000022029	ddx51 (ENSPKIG00000022075)	ENSPKIG00000022147	CABIN1 (ENSPKIG00000022171)	ENSPKIG00000022210	tbx16 (ENSPKIG00000022241)	CRKL (ENSPKIG00000022302)	KLHL22 (ENSPKIG00000022328)	TMEM132C (ENSPKIG00000022354)	slc15a4 (ENSPKIG00000022377)	GLT1D1 (ENSPKIG00000022406)	fzd10 (ENSPKIG00000022425)	SLC46A2 (ENSPKIG00000022436)	RIMBP2 (ENSPKIG00000022540)
P. kingsleyae	MODERN SPECIES	417											ENSPKIG00000017280	ENSPKIG00000017229	plbd2 (ENSPKIG00000017176)	LHX5 (ENSPKIG00000017141)	rbm19 (ENSPKIG00000017095)	ENSPKIG00000016971 ##22	ENSPKIG00000016896	ENSPKIG00000016881
Clupeocephala	ANCESTRAL SPECIES	67	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154	ENSGT00390000003706.a.a	ENSGT00940000165064.a	ENSGT00390000008694.b.b	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a.c.b	ENSGT00390000013415.a.b.ib	ENSGT00950000182864.a.b.b.a.a.b	ENSGT00940000154909.a.a	ENSGT00940000154909.b.b	ENSGT00940000165076.a	ENSGT00730000113357	ENSGT00940000157734	ENSGT00940000154418.a.b ##22	ENSGT00740000116948	ENSGT00940000160597	ENSGT00550000075141	ENSGT00390000008529	ENSGT00940000164254.a.a	ENSGT00940000159598	ENSGT00940000164226.a.a	ENSGT00940000154314.b	ENSGT00940000160547	ENSGT00940000155860.a	ENSGT00940000160296	ENSGT00720000108860	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Characiphysae	ANCESTRAL SPECIES	23											ENSGT00940000154909.b.b	ENSGT00940000165076.a	ENSGT00730000113357	ENSGT00940000157734	ENSGT00940000161685.A.a.c	ENSGT00940000154418.a.b ##22	ENSGT00940000156208.i.f	ENSGT00390000006784	ENSGT00940000153592.B.b.a.a	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00390000004906.b	ENSGT00390000000571	ENSGT00440000038585.c	ENSGT01100000263542.B.b.a.a	ENSGT00940000158016.c.a.b	ENSGT00390000016856	ENSGT00940000156231.o.a	ENSGT00390000004458	ENSGT00390000012669	ENSGT01050000245132	ENSGT00950000183172.A
Characiphysae_b	ANCESTRAL SPECIES	21											ENSGT00940000154909.b.b	ENSGT00940000165076.a	ENSGT00730000113357	ENSGT00940000157734	ENSGT00940000161685.A.a.c	ENSGT00940000154418.a.b ##22	ENSGT00940000156208.i.f	ENSGT00390000006784	ENSGT00940000153592.B.b.a.a	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00390000004906.b	ENSGT00390000000571	ENSGT00440000038585.c	ENSGT01100000263542.B.b.a.a	ENSGT00940000158016.c.a.b	ENSGT00390000016856	ENSGT00940000156231.o.a	ENSGT00390000004458	ENSGT00390000012669	ENSGT01050000245132	ENSGT00950000183172.A
Characoidei	ANCESTRAL SPECIES	368																ENSGT00940000154418.a.b ##22	ENSGT00940000156208.i.f	ENSGT00390000006784	ENSGT00940000153592.B.b.a.a	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00390000004906.b	ENSGT00390000000571
Red-bellied piranha	MODERN SPECIES	346															ENSPNAG00000010313	NEFM (ENSPNAG00000010328) ##22	neflb (ENSPNAG00000010400)	asb6 (ENSPNAG00000010436)	specc1la (ENSPNAG00000010465)	adora2aa (ENSPNAG00000010483)	upb1 (ENSPNAG00000010523)	gucd1 (ENSPNAG00000010532)	snrpd3 (ENSPNAG00000010547)	p2rx4b (ENSPNAG00000010619)	p2rx7 (ENSPNAG00000010872)	snrnp200 (ENSPNAG00000010998)	ptgesl (ENSPNAG00000001486)	slc20a1a (ENSPNAG00000001500)	vgll4l (ENSPNAG00000011071)	syn1 (ENSPNAG00000001515)	ENSPNAG00000001532
Cyprinoidei	ANCESTRAL SPECIES	32	ENSGT00940000158670	ENSGT00390000005154	ENSGT00390000003706.a.a	ENSGT00940000165064.a	ENSGT00390000008694.b.b	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a.c.b	ENSGT00390000013415.a.b.ib	ENSGT00950000182864.a.b.b.a.a.a.a	ENSGT00940000154909.a.a	ENSGT00940000154909.b.b	ENSGT00940000165076.a	ENSGT00730000113357	ENSGT00940000157734	ENSGT00940000161685.A.a.c	ENSGT00940000154418.a.b ##22	ENSGT00940000156208.i.f	ENSGT01100000263529.a.a.a.a.a.a.a.b.b.b.a.a.a.b	ENSGT00390000006784	ENSGT00940000153634.a	ENSGT00980000198631	ENSGT00940000158414	ENSGT00390000003114.e.a.a	ENSGT01100000263573.b.b	ENSGT00940000161090.B.c.b.b.b	ENSGT00390000017131	ENSGT00940000154583.f	ENSGT00940000155615.i.b	ENSGT00940000163873.c.a.o	ENSGT01030000235233	ENSGT00600000085663
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Cyprininae_a	ANCESTRAL SPECIES	735												ENSGT00940000154909.b.b.a	ENSGT00940000165076.a.a	ENSGT00730000113357.b	ENSGT00940000157734.j.a	ENSGT00940000154418.a.b ##22
Common carp reference	MODERN SPECIES	17	cdc45 (ENSCCRG00000077758)	ufd1l (ENSCCRG00000005757)	ciao1 (ENSCCRG00000054281)	tmem127 (ENSCCRG00000067809)	gatd3l (ENSCCRG00000075962)	adra1aa (ENSCCRG00000072930)	ENSCCRG00000069932	DPYSL2 (ENSCCRG00000055337)	bnip3la (ENSCCRG00000082666)	ENSCCRG00000009520	ENSCCRG00000021272	ENSCCRG00000050505	vsig8b (ENSCCRG00000005165)	ENSCCRG00000058104	dock5 (ENSCCRG00000067992)	ENSCCRG00000010568 ##22	neflb (ENSCCRG00000010574)	asb6 (ENSCCRG00000066416)	wdr13 (ENSCCRG00000009447)	ENSCCRG00000058899	asic1a (ENSCCRG00000013105)	ENSCCRG00000009438	ENSCCRG00000009436	ENSCCRG00000046868	slc6a6a (ENSCCRG00000010835)	grip2a (ENSCCRG00000045221)	ssuh2rs1 (ENSCCRG00000037248)	ssuh2rs1 (ENSCCRG00000029752)	ENSCCRG00000029766	ENSCCRG00000029768
Clupeiformes	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	23	LRRTM4 (ENSCHAG00000018459)	LRRTM4 (ENSCHAG00000018469)	vsig8b (ENSCHAG00000018504)	ENSCHAG00000018509	dock5 (ENSCHAG00000018562)	nefmb (ENSCHAG00000019368)	nefmb (ENSCHAG00000019375)	NEFM (ENSCHAG00000019388) ##22	neflb (ENSCHAG00000019412)	nefmb (ENSCHAG00000019427)	neflb (ENSCHAG00000019472)	NEFM (ENSCHAG00000019531) ##22	neflb (ENSCHAG00000019583)	neflb (ENSCHAG00000019640)	neflb (ENSCHAG00000019721)	ENSCHAG00000019805 ##22	neflb (ENSCHAG00000019840)	nefmb (ENSCHAG00000019884)	neflb (ENSCHAG00000019918)	asb6 (ENSCHAG00000019961)	si:dkey-91m11.5 (ENSCHAG00000020003)	specc1la (ENSCHAG00000021127)	adora2aa (ENSCHAG00000021667)	upb1 (ENSCHAG00000000959)	gucd1 (ENSCHAG00000001403)	snrpd3 (ENSCHAG00000001473)	p2rx4b (ENSCHAG00000001506)	p2rx7 (ENSCHAG00000001590)	ENSCHAG00000001689	ENSCHAG00000001712	ENSCHAG00000001779
Atlantic herring	MODERN SPECIES	23	adora2aa (ENSCHAG00000021667)	specc1la (ENSCHAG00000021127)	si:dkey-91m11.5 (ENSCHAG00000020003)	asb6 (ENSCHAG00000019961)	neflb (ENSCHAG00000019918)	nefmb (ENSCHAG00000019884)	neflb (ENSCHAG00000019840)	ENSCHAG00000019805 ##22	neflb (ENSCHAG00000019721)	neflb (ENSCHAG00000019640)	neflb (ENSCHAG00000019583)	NEFM (ENSCHAG00000019531) ##22	neflb (ENSCHAG00000019472)	nefmb (ENSCHAG00000019427)	neflb (ENSCHAG00000019412)	NEFM (ENSCHAG00000019388) ##22	nefmb (ENSCHAG00000019375)	nefmb (ENSCHAG00000019368)	dock5 (ENSCHAG00000018562)	ENSCHAG00000018509	vsig8b (ENSCHAG00000018504)	LRRTM4 (ENSCHAG00000018469)	LRRTM4 (ENSCHAG00000018459)	ENSCHAG00000018441	ENSCHAG00000018428	ENSCHAG00000018377	bnip3la (ENSCHAG00000018367)	DPYSL2 (ENSCHAG00000014643)	adra1aa (ENSCHAG00000014533)	tmem230b (ENSCHAG00000014514)	ENSCHAG00000014415
Atlantic herring	MODERN SPECIES	23	p2rx4b (ENSCHAG00000001506)	snrpd3 (ENSCHAG00000001473)	gucd1 (ENSCHAG00000001403)	upb1 (ENSCHAG00000000959)	adora2aa (ENSCHAG00000021667)	specc1la (ENSCHAG00000021127)	si:dkey-91m11.5 (ENSCHAG00000020003)	asb6 (ENSCHAG00000019961)	neflb (ENSCHAG00000019918)	nefmb (ENSCHAG00000019884)	neflb (ENSCHAG00000019840)	ENSCHAG00000019805 ##22	neflb (ENSCHAG00000019721)	neflb (ENSCHAG00000019640)	neflb (ENSCHAG00000019583)	NEFM (ENSCHAG00000019531) ##22	neflb (ENSCHAG00000019472)	nefmb (ENSCHAG00000019427)	neflb (ENSCHAG00000019412)	NEFM (ENSCHAG00000019388) ##22	nefmb (ENSCHAG00000019375)	nefmb (ENSCHAG00000019368)	dock5 (ENSCHAG00000018562)	ENSCHAG00000018509	vsig8b (ENSCHAG00000018504)	LRRTM4 (ENSCHAG00000018469)	LRRTM4 (ENSCHAG00000018459)	ENSCHAG00000018441	ENSCHAG00000018428	ENSCHAG00000018377	bnip3la (ENSCHAG00000018367)
Euteleosteomorpha	ANCESTRAL SPECIES	154	ENSGT00950000182964.a.b.a.a.b.f	ENSGT00940000166638	ENSGT00390000010075	ENSGT00940000165107.A	ENSGT00940000156804.b	ENSGT00940000156814	ENSGT00940000153725.b.c	ENSGT00950000182909.a.e	ENSGT00940000154484.B.a.a	ENSGT00940000163919.b	ENSGT00940000159932.b	ENSGT00940000155760.t.b	ENSGT00730000111146	ENSGT00940000161685.A.a	ENSGT01100000265222	ENSGT00940000154418.a.b ##22	ENSGT00940000156208.i	ENSGT00950000182926.b.c	ENSGT00940000164254.a.b	ENSGT00820000127055.b	ENSGT00940000169602	ENSGT00730000111140	ENSGT00940000167368	ENSGT00390000006044	ENSGT00940000154702.a.b	ENSGT00940000166762	ENSGT00950000183203.c.a	ENSGT01030000234627.a.b.a.b.b	ENSGT00940000153892.B	ENSGT00940000158699	ENSGT00940000156664.c
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00940000175463	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00940000161893	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000167956.a	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701
Atherinomorphae	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT01030000234623.a.b.a	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.B	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701	ENSGT00940000153998.b
Cyprinodontoidei	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Poeciliinae	ANCESTRAL SPECIES	5	ENSGT00940000158784	ENSGT01100000263556.a.b.a.b.a.b	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00940000157016.c	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701	ENSGT00940000153998.b	ENSGT00940000153883.a
Poecilia	ANCESTRAL SPECIES	3	ENSGT01100000263556.a.b.a.b.a.b	ENSGT00950000182774.b.a.b.a.b.a.b.c.a	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00940000157016.c	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701	ENSGT00940000153998.b	ENSGT00940000153883.a
NAME_6	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Amazon molly	MODERN SPECIES	354	ENSPFOG00000024254	ENSPFOG00000017388	ENSPFOG00000017373	slc14a2 (ENSPFOG00000017355)	lnpep (ENSPFOG00000017275)	erap2 (ENSPFOG00000017179)	rgmb (ENSPFOG00000017164)	cfap52 (ENSPFOG00000017097)	riok2 (ENSPFOG00000017064)	lix1 (ENSPFOG00000017040)	epg5 (ENSPFOG00000016724)	dnajb5 (ENSPFOG00000016693)	akr1a1a (ENSPFOG00000016672)	vcp (ENSPFOG00000016627)	fancg (ENSPFOG00000016597)	ENSPFOG00000016590 ##22	thoc5 (ENSPFOG00000016511)	tfip11 (ENSPFOG00000016485)	srrd (ENSPFOG00000016474)	ENSPFOG00000016346	DDHD2 (ENSPFOG00000016171)	ENSPFOG00000023537	plekha2 (ENSPFOG00000016037)	ENSPFOG00000016001	ENSPFOG00000015991	TPCN1 (ENSPFOG00000015798)	SLC8B1 (ENSPFOG00000015745)	ENSPFOG00000015680	morc2 (ENSPFOG00000015588)	plbd2 (ENSPFOG00000015500)	ENSPFOG00000015471
Guppy	MODERN SPECIES	461	ENSPREG00000002556	ENSPREG00000002530	ENSPREG00000002526	slc14a2 (ENSPREG00000002516)	lnpep (ENSPREG00000002438)	erap2 (ENSPREG00000002379)	rgmb (ENSPREG00000002351)	cfap52 (ENSPREG00000002292)	riok2 (ENSPREG00000002255)	lix1 (ENSPREG00000002231)	epg5 (ENSPREG00000002187)	dnajb5 (ENSPREG00000002176)	akr1a1a (ENSPREG00000002136)	vcp (ENSPREG00000002065)	fancg (ENSPREG00000002006)	ENSPREG00000001885 ##22	thoc5 (ENSPREG00000001816)	tfip11 (ENSPREG00000001742)	srrd (ENSPREG00000001717)	ENSPREG00000001690	DDHD2 (ENSPREG00000001587)	ENSPREG00000001549	ENSPREG00000001515	plekha2 (ENSPREG00000001481)	tbx5b (ENSPREG00000001432)	ENSPREG00000001420	TPCN1 (ENSPREG00000001304)	SLC8B1 (ENSPREG00000001242)	ENSPREG00000001176	morc2 (ENSPREG00000001148)	ENSPREG00000001107
Platyfish	MODERN SPECIES	3	ENSXMAG00000020239	slc14a2 (ENSXMAG00000007334)	lnpep (ENSXMAG00000007345)	erap2 (ENSXMAG00000007362)	ENSXMAG00000021522	rgmb (ENSXMAG00000027608)	ENSXMAG00000020996	cfap52 (ENSXMAG00000007410)	riok2 (ENSXMAG00000007425)	lix1 (ENSXMAG00000026388)	ENSXMAG00000027898	dnajb5 (ENSXMAG00000007469)	akr1a1a (ENSXMAG00000007474)	vcp (ENSXMAG00000007485)	fancg (ENSXMAG00000007501)	ENSXMAG00000007502 ##22	thoc5 (ENSXMAG00000007503)	tfip11 (ENSXMAG00000007524)	srrd (ENSXMAG00000007531)	ENSXMAG00000007532	DDHD2 (ENSXMAG00000007546)	ENSXMAG00000007559	ENSXMAG00000021229	plekha2 (ENSXMAG00000022106)	ENSXMAG00000005990	ENSXMAG00000022089	TPCN1 (ENSXMAG00000007572)	SLC8B1 (ENSXMAG00000007594)	ENSXMAG00000007604	morc2 (ENSXMAG00000007611)	ENSXMAG00000007638
Aplocheiloidei	ANCESTRAL SPECIES	24	ENSGT01030000234623.a.b.a	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00940000161893	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701	ENSGT00940000153998.b
Turquoise killifish	MODERN SPECIES	1627	CDK7 (ENSNFUG00015021503)	SETBP1 (ENSNFUG00015021524)	SLC14A2 (ENSNFUG00015021537)	LNPEP (ENSNFUG00015021617)	or41a2 (ENSNFUG00015022511)	ENSNFUG00015022512	RGMB (ENSNFUG00015022515)	RIOK2 (ENSNFUG00015022517)	ENSNFUG00015022522	lix1 (ENSNFUG00015022526)	epg5 (ENSNFUG00015022553)	dnajb5 (ENSNFUG00015022636)	akr1a1a (ENSNFUG00015022694)	VCP (ENSNFUG00015022711)	fancg (ENSNFUG00015022825)	ENSNFUG00015022836 ##22	tfip11 (ENSNFUG00015022997)	srrd (ENSNFUG00015023033)	ENSNFUG00015023054	DDHD2 (ENSNFUG00015023081)	ENSNFUG00015023324	ENSNFUG00015023327	plekha2 (ENSNFUG00015023330)	ENSNFUG00015023340	TPCN1 (ENSNFUG00015023346)	FP103011.3 (ENSNFUG00015023372)	OLA.8803 (ENSNFUG00015023379)	morc2 (ENSNFUG00015023400)	ENSNFUG00015023637	plbd2 (ENSNFUG00015023646)	slc2a11b (ENSNFUG00015023729)
Oryzias	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Oryzias_b	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Indian medaka	MODERN SPECIES	11	serinc5 (ENSOMEG00000004881)	cdk7 (ENSOMEG00000004854)	SETBP1 (ENSOMEG00000004784)	slc14a2 (ENSOMEG00000004745)	lnpep (ENSOMEG00000004717)	erap2 (ENSOMEG00000004693)	ENSOMEG00000004644	rgmb (ENSOMEG00000004638)	riok2 (ENSOMEG00000004617)	lix1 (ENSOMEG00000004576)	epg5 (ENSOMEG00000004548)	dnajb5 (ENSOMEG00000004435)	vcp (ENSOMEG00000004412)	akr1a1a (ENSOMEG00000004384)	FANCG (ENSOMEG00000004352)	ENSOMEG00000004196 ##22	thoc5 (ENSOMEG00000003930)	tfip11 (ENSOMEG00000000088)	srrd (ENSOMEG00000003879)	ENSOMEG00000003867	DDHD2 (ENSOMEG00000003795)	ENSOMEG00000003713	ENSOMEG00000003691	plekha2 (ENSOMEG00000003676)	ENSOMEG00000003653	ENSOMEG00000003642	TPCN1 (ENSOMEG00000000872)	SLC8B1 (ENSOMEG00000003538)	ENSOMEG00000003471	morc2 (ENSOMEG00000003438)	ENSOMEG00000003404
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00940000175463	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00940000161893	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000167956.a	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701
Cichlidae	ANCESTRAL SPECIES	6	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00940000175463	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701	ENSGT00940000153998.b	ENSGT00940000153883.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	11	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00940000175463	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701	ENSGT00940000153998.b	ENSGT00940000153883.a
Nile tilapia	MODERN SPECIES	3	serinc5 (ENSONIG00000013720)	cdk7 (ENSONIG00000013709)	SETBP1 (ENSONIG00000022643)	slc14a2 (ENSONIG00000013706)	lnpep (ENSONIG00000013699)	erap2 (ENSONIG00000013694)	rgmb (ENSONIG00000013691)	ENSONIG00000032058	riok2 (ENSONIG00000013689)	lix1 (ENSONIG00000039871)	epg5 (ENSONIG00000013677)	dnajb5 (ENSONIG00000013675)	akr1a1a (ENSONIG00000013672)	vcp (ENSONIG00000013663)	fancg (ENSONIG00000013660)	ENSONIG00000013659 ##22	thoc5 (ENSONIG00000013656)	tfip11 (ENSONIG00000013652)	srrd (ENSONIG00000013648)	ENSONIG00000013637	DDHD2 (ENSONIG00000013629)	ENSONIG00000013626	ENSONIG00000036051	plekha2 (ENSONIG00000013622)	tbx5b (ENSONIG00000013614)	ENSONIG00000035259	TPCN1 (ENSONIG00000013599)	SLC8B1 (ENSONIG00000013596)	ENSONIG00000013594	morc2 (ENSONIG00000013590)	ENSONIG00000013588
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	8	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00940000175463	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701	ENSGT00940000153998.b	ENSGT00940000153883.a
Haplochromini	ANCESTRAL SPECIES	4	ENSGT01030000234623.a.b.a	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701	ENSGT00940000153998.b	ENSGT00940000153883.a
Haplochromini_A	ANCESTRAL SPECIES	4	ENSGT01030000234623.a.b.a	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701	ENSGT00940000153998.b	ENSGT00940000153883.a
Haplochromini_B	ANCESTRAL SPECIES	2	ENSGT01030000234623.a.b.a	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701	ENSGT00940000153998.b	ENSGT00940000153883.a
Eastern happy	MODERN SPECIES	3	serinc5 (ENSACLG00000003612)	cdk7 (ENSACLG00000003567)	SETBP1 (ENSACLG00000003556)	slc14a2 (ENSACLG00000002965)	lnpep (ENSACLG00000002855)	erap2 (ENSACLG00000002836)	ENSACLG00000002805	rgmb (ENSACLG00000002798)	riok2 (ENSACLG00000002755)	lix1 (ENSACLG00000002703)	epg5 (ENSACLG00000002449)	dnajb5 (ENSACLG00000002419)	akr1a1a (ENSACLG00000002398)	vcp (ENSACLG00000002345)	fancg (ENSACLG00000002332)	ENSACLG00000002067 ##22	thoc5 (ENSACLG00000002009)	tfip11 (ENSACLG00000001959)	srrd (ENSACLG00000001946)	ENSACLG00000001903	DDHD2 (ENSACLG00000001831)	ENSACLG00000001811	ENSACLG00000001806	plekha2 (ENSACLG00000001745)	tbx5b (ENSACLG00000001720)	TPCN1 (ENSACLG00000001638)	SLC8B1 (ENSACLG00000001612)	ENSACLG00000001554	morc2 (ENSACLG00000001495)	ENSACLG00000001466	plbd2 (ENSACLG00000001449)
Zebra mbuna	MODERN SPECIES	1094	serinc5 (ENSMZEG00005017166)	cdk7 (ENSMZEG00005017161)	SETBP1 (ENSMZEG00005017151)	slc14a2 (ENSMZEG00005017138)	lnpep (ENSMZEG00005017106)	erap2 (ENSMZEG00005017088)	ENSMZEG00005017083	rgmb (ENSMZEG00005017081)	riok2 (ENSMZEG00005017067)	lix1 (ENSMZEG00005017058)	epg5 (ENSMZEG00005016994)	dnajb5 (ENSMZEG00005016965)	akr1a1a (ENSMZEG00005016952)	vcp (ENSMZEG00005016922)	fancg (ENSMZEG00005016912)	ENSMZEG00005016857 ##22	thoc5 (ENSMZEG00005016829)	tfip11 (ENSMZEG00005016814)	srrd (ENSMZEG00005016807)	ENSMZEG00005016794	DDHD2 (ENSMZEG00005016757)	ENSMZEG00005016747	ENSMZEG00005016742	plekha2 (ENSMZEG00005016734)	tbx5b (ENSMZEG00005016724)	ENSMZEG00005016719	TPCN1 (ENSMZEG00005016697)	SLC8B1 (ENSMZEG00005016679)	ENSMZEG00005016667	morc2 (ENSMZEG00005016648)	ENSMZEG00005016638
P. nyererei	MODERN SPECIES	301	serinc5 (ENSPNYG00000019070)	cdk7 (ENSPNYG00000019041)	SETBP1 (ENSPNYG00000019032)	slc14a2 (ENSPNYG00000019009)	lnpep (ENSPNYG00000018963)	erap2 (ENSPNYG00000018945)	ENSPNYG00000018929	rgmb (ENSPNYG00000018911)	riok2 (ENSPNYG00000018868)	lix1 (ENSPNYG00000018698)	epg5 (ENSPNYG00000018478)	dnajb5 (ENSPNYG00000018445)	akr1a1a (ENSPNYG00000018390)	vcp (ENSPNYG00000018337)	fancg (ENSPNYG00000018296)	ENSPNYG00000018172 ##22	thoc5 (ENSPNYG00000018079)	tfip11 (ENSPNYG00000018025)	srrd (ENSPNYG00000018008)	ENSPNYG00000017993	DDHD2 (ENSPNYG00000017956)	ENSPNYG00000017934	ENSPNYG00000017910	plekha2 (ENSPNYG00000017861)	tbx5b (ENSPNYG00000017841)	TPCN1 (ENSPNYG00000017783)	SLC8B1 (ENSPNYG00000017740)	ENSPNYG00000017729	morc2 (ENSPNYG00000017712)	ENSPNYG00000017686	plbd2 (ENSPNYG00000017669)
Burton s mouthbrooder	MODERN SPECIES	551									riok2 (ENSHBUG00000010705)	lix1 (ENSHBUG00000000283)	epg5 (ENSHBUG00000010599)	dnajb5 (ENSHBUG00000010328)	akr1a1a (ENSHBUG00000010157)	vcp (ENSHBUG00000010218)	fancg (ENSHBUG00000010114)	ENSHBUG00000010094 ##22	thoc5 (ENSHBUG00000010035)	tfip11 (ENSHBUG00000009935)	srrd (ENSHBUG00000009882)	ENSHBUG00000009857	DDHD2 (ENSHBUG00000009801)	ENSHBUG00000009673	ENSHBUG00000009650	plekha2 (ENSHBUG00000009642)	tbx5b (ENSHBUG00000009624)	ENSHBUG00000009597	TPCN1 (ENSHBUG00000009574)	SLC8B1 (ENSHBUG00000009404)	ENSHBUG00000009385	morc2 (ENSHBUG00000009325)	ENSHBUG00000009092
Lyretail cichlid	MODERN SPECIES	296	SETBP1 (ENSNBRG00000003881)	ENSNBRG00000003891	slc14a2 (ENSNBRG00000003900)	lnpep (ENSNBRG00000003944)	erap2 (ENSNBRG00000004147)	ENSNBRG00000004242	rgmb (ENSNBRG00000004269)	riok2 (ENSNBRG00000004317)	ENSNBRG00000004346	lix1 (ENSNBRG00000004358)	epg5 (ENSNBRG00000004422)	dnajb5 (ENSNBRG00000004666)	akr1a1a (ENSNBRG00000004686)	vcp (ENSNBRG00000004764)	fancg (ENSNBRG00000004826)	ENSNBRG00000004917 ##22	thoc5 (ENSNBRG00000005174)	tfip11 (ENSNBRG00000005227)	srrd (ENSNBRG00000005268)	ENSNBRG00000005293	ENSNBRG00000005535	ENSNBRG00000005560	ENSNBRG00000005582	ENSNBRG00000005620	plekha2 (ENSNBRG00000005631)	tbx5b (ENSNBRG00000005699)	ENSNBRG00000005728	TPCN1 (ENSNBRG00000005741)	SLC8B1 (ENSNBRG00000005801)	ENSNBRG00000005815	morc2 (ENSNBRG00000005878)
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT01030000234623.a.b.a	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00940000161893	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000167956	ENSGT00940000172701	ENSGT00730000111354	ENSGT00940000158958	ENSGT00940000157433
Eupercaria	ANCESTRAL SPECIES	5	ENSGT01030000234623.a.b.a	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.B	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000167956	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT01030000234623.a.b.a	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.B	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000167956	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701
Ballan wrasse	MODERN SPECIES	347									riok2 (ENSLBEG00000015421)	lix1 (ENSLBEG00000015387)	epg5 (ENSLBEG00000015230)	dnajb5 (ENSLBEG00000015177)	akr1a1a (ENSLBEG00000015143)	vcp (ENSLBEG00000015074)	fancg (ENSLBEG00000015022)	ENSLBEG00000014345 ##22	thoc5 (ENSLBEG00000014119)	tfip11 (ENSLBEG00000014079)	srrd (ENSLBEG00000014051)	ENSLBEG00000013999	DDHD2 (ENSLBEG00000013935)	ENSLBEG00000013881	ENSLBEG00000013835	plekha2 (ENSLBEG00000013812)	ENSLBEG00000013696	ENSLBEG00000013639	ENSLBEG00000013606	TPCN1 (ENSLBEG00000013493)	SLC8B1 (ENSLBEG00000013415)	ENSLBEG00000013368	morc2 (ENSLBEG00000013280)
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT01030000234623.a.b.a	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.B	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000167956	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701
Perciformes	ANCESTRAL SPECIES	6	ENSGT01030000234623.a.b.a	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.B	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000167956	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT01030000234623.a.b.a	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000167956	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701	ENSGT00940000153998.b
Pike perch	MODERN SPECIES	23	cdk7 (ENSSLUG00000022205)	SETBP1 (ENSSLUG00000022238)	slc14a2 (ENSSLUG00000022246)	lnpep (ENSSLUG00000022402)	erap2 (ENSSLUG00000023692)	rgmb (ENSSLUG00000023992)	ENSSLUG00000023995	riok2 (ENSSLUG00000024003)	lix1 (ENSSLUG00000024020)	epg5 (ENSSLUG00000024039)	dnajb5 (ENSSLUG00000024151)	akr1a1a (ENSSLUG00000024154)	vcp (ENSSLUG00000024167)	fancg (ENSSLUG00000024187)	ENSSLUG00000024197	ENSSLUG00000024205 ##22	thoc5 (ENSSLUG00000024224)	tfip11 (ENSSLUG00000024294)	srrd (ENSSLUG00000024311)	ENSSLUG00000024348	DDHD2 (ENSSLUG00000024599)	ENSSLUG00000024615	ENSSLUG00000024619	plekha2 (ENSSLUG00000024624)	tbx5b (ENSSLUG00000024634)	ENSSLUG00000024649	ENSSLUG00000024654	TPCN1 (ENSSLUG00000024679)	SLC8B1 (ENSSLUG00000024750)	ENSSLUG00000024764	morc2 (ENSSLUG00000024778)
Channel bull blenny	MODERN SPECIES	23	serinc5 (ENSCGOG00000009427)	cdk7 (ENSCGOG00000009523)	SETBP1 (ENSCGOG00000010177)	slc14a2 (ENSCGOG00000010195)	lnpep (ENSCGOG00000010728)	erap2 (ENSCGOG00000011320)	rgmb (ENSCGOG00000012501)	ENSCGOG00000012502	riok2 (ENSCGOG00000012508)	lix1 (ENSCGOG00000012595)	epg5 (ENSCGOG00000012599)	dnajb5 (ENSCGOG00000012919)	akr1a1a (ENSCGOG00000012924)	vcp (ENSCGOG00000012947)	fancg (ENSCGOG00000013671)	ENSCGOG00000013688 ##22	thoc5 (ENSCGOG00000013784)	tfip11 (ENSCGOG00000014793)	srrd (ENSCGOG00000015551)	ENSCGOG00000015557	ENSCGOG00000015565	ENSCGOG00000015692	ENSCGOG00000015707	plekha2 (ENSCGOG00000015711)	tbx5b (ENSCGOG00000015777)	ENSCGOG00000015787	TPCN1 (ENSCGOG00000015790)	SLC8B1 (ENSCGOG00000015799)	ENSCGOG00000015830	morc2 (ENSCGOG00000015908)	ENSCGOG00000016451
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00940000155179	ENSGT00940000158784.p	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000161685.B	ENSGT00940000154418.a.b ##22	ENSGT00390000013777	ENSGT00390000003948	ENSGT00390000012739	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000167956	ENSGT00940000172701	ENSGT00940000158958	ENSGT00940000157433	ENSGT00640000091701	ENSGT00940000153998.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
European seabass	MODERN SPECIES	13	thbs4a (ENSDLAG00005023415)	serinc5 (ENSDLAG00005023386)	cdk7 (ENSDLAG00005023361)	ENSDLAG00005032086	ENSDLAG00005023354	slc14a2 (ENSDLAG00005023309)	lnpep (ENSDLAG00005022417)	erap2 (ENSDLAG00005022293)	rgmb (ENSDLAG00005032609)	riok2 (ENSDLAG00005022267)	LIX1 (ENSDLAG00005022261)	epg5 (ENSDLAG00005021481)	dnajb5 (ENSDLAG00005021436)	akr1a1a (ENSDLAG00005028176)	vcp (ENSDLAG00005021070)	ENSDLAG00005017894 ##22	ENSDLAG00005020591	ENSDLAG00005020477	ENSDLAG00005020494	ENSDLAG00005020367	ENSDLAG00005018765	ENSDLAG00005018710	ENSDLAG00005018697	ENSDLAG00005018679	ENSDLAG00005018590	ENSDLAG00005027054	ENSDLAG00005018577	ENSDLAG00005018200	ENSDLAG00005018074	ENSDLAG00005017908	ENSDLAG00005017598
Gilthead seabream	MODERN SPECIES	19	serinc5 (ENSSAUG00010008798)	cdk7 (ENSSAUG00010008799)	SETBP1 (ENSSAUG00010008803)	slc14a2 (ENSSAUG00010008810)	lnpep (ENSSAUG00010008880)	erap2 (ENSSAUG00010012402)	rgmb (ENSSAUG00010012521)	ENSSAUG00010012524	riok2 (ENSSAUG00010012525)	lix1 (ENSSAUG00010012532)	epg5 (ENSSAUG00010012541)	dnajb5 (ENSSAUG00010012770)	akr1a1a (ENSSAUG00010012771)	vcp (ENSSAUG00010012786)	fancg (ENSSAUG00010013226)	ENSSAUG00010013228 ##22	thoc5 (ENSSAUG00010013232)	tfip11 (ENSSAUG00010013272)	srrd (ENSSAUG00010013275)	ENSSAUG00010013276	DDHD2 (ENSSAUG00010013280)	ENSSAUG00010013429	ift81 (ENSSAUG00010018520)	si:dkey-91m11.5 (ENSSAUG00010018567)	ENSSAUG00010021145	specc1la (ENSSAUG00010021153)	adora2aa (ENSSAUG00010021157)	upb1 (ENSSAUG00010021158)	gucd1 (ENSSAUG00010021159)	p2rx4b (ENSSAUG00010021167)	zbtb26 (ENSSAUG00010021746)
Percomorphaceae_D	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Anabantaria	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Anabantoidei	ANCESTRAL SPECIES	4	ENSGT00940000155227.b	ENSGT01030000234623.a.b.a	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00940000161893	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000167956.k	ENSGT00940000172701	ENSGT00730000111354	ENSGT00940000158958	ENSGT00940000157433
Siamese fighting fish	MODERN SPECIES	20	serinc5 (ENSBSLG00000005144)	cdk7 (ENSBSLG00000005258)	SETBP1 (ENSBSLG00000005663)	slc14a2 (ENSBSLG00000005696)	lnpep (ENSBSLG00000005907)	erap2 (ENSBSLG00000007673)	rgmb (ENSBSLG00000007852)	ENSBSLG00000007868	riok2 (ENSBSLG00000007900)	lix1 (ENSBSLG00000008002)	epg5 (ENSBSLG00000008048)	ENSBSLG00000008913	dnajb5 (ENSBSLG00000008948)	vcp (ENSBSLG00000009011)	fancg (ENSBSLG00000009304)	ENSBSLG00000009443 ##22	thoc5 (ENSBSLG00000009508)	tfip11 (ENSBSLG00000009957)	srrd (ENSBSLG00000010077)	ENSBSLG00000010621	DDHD2 (ENSBSLG00000010863)	ENSBSLG00000011363	plekha2 (ENSBSLG00000011372)	ENSBSLG00000011606	ENSBSLG00000011689	ENSBSLG00000011748	TPCN1 (ENSBSLG00000011794)	SLC8B1 (ENSBSLG00000012039)	ENSBSLG00000012165	morc2 (ENSBSLG00000012278)	ENSBSLG00000012481
Carangaria	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Pleuronectoidei	ANCESTRAL SPECIES	8	ENSGT01030000234623.a.b.a	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00390000005869.b	ENSGT00390000007354	ENSGT00940000156090.a	ENSGT00940000166020	ENSGT00900000141071.b	ENSGT00390000007195	ENSGT00940000154418.a.b ##22	ENSGT00940000161893	ENSGT00390000013777	ENSGT00390000012739	ENSGT00390000003948	ENSGT00390000012485.a.a	ENSGT00940000156808	ENSGT00940000156991.a.b	ENSGT00390000010398.B	ENSGT00940000158064	ENSGT00940000156506.a	ENSGT00940000167956	ENSGT00940000172701	ENSGT00730000111354	ENSGT00940000158958	ENSGT00940000157433
Tongue sole	MODERN SPECIES	398	EGFLAM (ENSCSEG00000012729)	pdlim5a (ENSCSEG00000012832)	BMPR1B (ENSCSEG00000012881)	UNC5C (ENSCSEG00000012896)	SLC8B1 (ENSCSEG00000012948)	TPCN1 (ENSCSEG00000012960)	ENSCSEG00000012986	tbx5b (ENSCSEG00000012997)	plekha2 (ENSCSEG00000013004)	ENSCSEG00000013019	ENSCSEG00000013045	DDHD2 (ENSCSEG00000013057)	ENSCSEG00000013129	vcp (ENSCSEG00000013416)	ENSCSEG00000013449	ENSCSEG00000013569 ##22	thoc5 (ENSCSEG00000014071)	tfip11 (ENSCSEG00000014082)	srrd (ENSCSEG00000014108)	akr1a1a (ENSCSEG00000014113)	dnajb5 (ENSCSEG00000014128)	epg5 (ENSCSEG00000014141)	ENSCSEG00000014191	lix1 (ENSCSEG00000014197)	riok2 (ENSCSEG00000014204)	ENSCSEG00000014222	nr2f1a (ENSCSEG00000014227)	fam172a (ENSCSEG00000014233)	KIAA0825 (ENSCSEG00000014300)	ENSCSEG00000014394	TRPM3 (ENSCSEG00000014402)
Cod	MODERN SPECIES	2	coq2 (ENSGMOG00000003272)	ENSGMOG00000034446	ENSGMOG00000003215	ENSGMOG00000009782	ENSGMOG00000001672	riok2 (ENSGMOG00000011354)	ENSGMOG00000011352	ENSGMOG00000026438	epg5 (ENSGMOG00000011318)	dnajb5 (ENSGMOG00000017093)	ENSGMOG00000036025	akr1a1a (ENSGMOG00000004962)	akr1a1a (ENSGMOG00000030018)	vcp (ENSGMOG00000004938)	fancg (ENSGMOG00000027798)	ENSGMOG00000004899 ##22	ENSGMOG00000004864	ENSGMOG00000004834	ENSGMOG00000004812	ENSGMOG00000004762	tbx5b (ENSGMOG00000009107)	ENSGMOG00000032201	ENSGMOG00000030080	ENSGMOG00000009088	SLC8B1 (ENSGMOG00000009070)	ENSGMOG00000009049	ENSGMOG00000032420	ENSGMOG00000028681	ENSGMOG00000037014	ENSGMOG00000023655	ENSGMOG00000027609
Protacanthopterygii	ANCESTRAL SPECIES	26	ENSGT00940000158634.b	ENSGT00940000156639.d	ENSGT00940000166638	ENSGT00390000010075	ENSGT00940000165107.A	ENSGT00940000156804.b	ENSGT00940000156814	ENSGT01010000222287.B.b.b.b	ENSGT00940000153725.b.c	ENSGT00950000182909.a.e	ENSGT00940000154484.B.a.a	ENSGT00940000163919.b	ENSGT00940000159932.b	ENSGT00940000155760.t.b	ENSGT00730000111146.e	ENSGT00940000154418.a.b ##22	ENSGT00940000156208.i	ENSGT00950000182926.b.c	ENSGT00730000111146.f	ENSGT00940000161685.A.a	ENSGT01100000265222	ENSGT00940000164254.a.b	ENSGT00820000127055.b.e.b	ENSGT00940000169602	ENSGT00820000127055.b.e.a	ENSGT00730000111140	ENSGT00940000167368	ENSGT00390000006044.m	ENSGT00940000154702.a.b	ENSGT00940000166762	ENSGT00390000017498.c
Salmoninae	ANCESTRAL SPECIES	2126															ENSGT00390000004409.a.b.e	ENSGT00940000154418.a.b ##22
Salmoninae_a	ANCESTRAL SPECIES	987															ENSGT00390000004409.a.b.e	ENSGT00940000154418.a.b ##22
Salmo	ANCESTRAL SPECIES	29	ENSGT00940000166192.b	ENSGT00940000158935.g.a	ENSGT00940000156111.f.b	ENSGT00940000158282.a	ENSGT00940000155716.t	ENSGT00940000153997.b.b.c.b.a	ENSGT00940000156914.o.b.c	ENSGT00940000155303.l.f	ENSGT00940000154935.c.a.a.b	ENSGT00940000153289.a.a.a.c.b.a	ENSGT00390000014618.a.b.c	ENSGT00390000004409.a.b.f.a	ENSGT00940000161685.A.b.c	ENSGT01070000254141.a.a	ENSGT00390000004409.a.b.e	ENSGT00940000154418.a.b ##22	ENSGT01060000253019	ENSGT00950000182869.e.a.a.q.b	ENSGT00940000154922.b.u.b.f	ENSGT00940000161321.j	ENSGT00530000063629.a.n	ENSGT00940000155793.a.b.f	ENSGT00390000008171.l	ENSGT00940000157356.n.b	ENSGT00940000157409.m	ENSGT00940000160584.a	ENSGT00940000154908.a.l	ENSGT00530000063652.b.b	ENSGT00940000157107.a.b.c	ENSGT00390000014627	ENSGT00940000165770.a.f
River trout	MODERN SPECIES	35	alox5a (ENSSTUG00000024257)	ENSSTUG00000024435	ENSSTUG00000024484	zfand4 (ENSSTUG00000024487)	ENSSTUG00000024503	anxa11a (ENSSTUG00000024612)	dlg5a (ENSSTUG00000027118)	KCNMA1 (ENSSTUG00000027806)	lrmda (ENSSTUG00000029872)	ENSSTUG00000029929	ENSSTUG00000029937	ENSSTUG00000029942	znf503 (ENSSTUG00000029950)	comtd1 (ENSSTUG00000029969)	ENSSTUG00000030142	NEFM (ENSSTUG00000030173) ##22	ENSSTUG00000030210	ENSSTUG00000030225	ENSSTUG00000030230	vdac2 (ENSSTUG00000030244)	ENSSTUG00000030469	CRIP3 (ENSSTUG00000030478)	ENSSTUG00000030500	kcnh1a (ENSSTUG00000030514)	mrpl57 (ENSSTUG00000030634)	PLCE1 (ENSSTUG00000030671)	hif1an (ENSSTUG00000031165)	wnt8b (ENSSTUG00000031216)	scdb (ENSSTUG00000031233)	ENSSTUG00000031247	SPOCK2 (ENSSTUG00000031251)
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Chinook salmon	MODERN SPECIES	30	eif4e1c (ENSOTSG00005019764)	ENSOTSG00005019763	alox5a (ENSOTSG00005019757)	marchf8 (ENSOTSG00005019756)	zfand4 (ENSOTSG00005019754)	ENSOTSG00005019752	anxa11a (ENSOTSG00005019303)	dlg5a (ENSOTSG00005018547)	ENSOTSG00005018529	ENSOTSG00005018487	lrmda (ENSOTSG00005018478)	znf503 (ENSOTSG00005018472)	comtd1 (ENSOTSG00005018468)	ENSOTSG00005018457	comtd1 (ENSOTSG00005018453)	NEFM (ENSOTSG00005018451) ##22	ENSOTSG00005018449	vdac2 (ENSOTSG00005018405)	ENSOTSG00005018275	CRIP3 (ENSOTSG00005018272)	kcnh1a (ENSOTSG00005018110)	mrpl57 (ENSOTSG00005018104)	PLCE1 (ENSOTSG00005018012)	hif1an (ENSOTSG00005017978)	wnt8b (ENSOTSG00005017936)	scdb (ENSOTSG00005017931)	ENSOTSG00005017929	SPOCK2 (ENSOTSG00005017928)	tysnd1 (ENSOTSG00005017923)	sar1ab (ENSOTSG00005017919)	EIF4EBP2 (ENSOTSG00005017917)
Huchen	DUPLICATION
Huchen	MODERN SPECIES	538	EFNA5 (ENSHHUG00000046211)	GADD45G (ENSHHUG00000046208)	gadd45gb.1 (ENSHHUG00000046200)	ENSHHUG00000046198	ENSHHUG00000046190	ghrb (ENSHHUG00000046164)	c7b (ENSHHUG00000046039)	rgs7bpb (ENSHHUG00000046027)	ENSHHUG00000046024	ENSHHUG00000046017	htr1ab (ENSHHUG00000046016)	ENSHHUG00000046014	ENSHHUG00000046012	ANK1 (ENSHHUG00000045846)	ftsj1 (ENSHHUG00000045829)	NEFM (ENSHHUG00000045828) ##22	NEFL (ENSHHUG00000045825)	pgam2 (ENSHHUG00000045808)	ENSHHUG00000045787	crkl (ENSHHUG00000045781)	med15 (ENSHHUG00000045753)	si:ch211-222n4.2 (ENSHHUG00000045750)	smpd4 (ENSHHUG00000045735)
Huchen	MODERN SPECIES	574															comtd1 (ENSHHUG00000004639)	ENSHHUG00000004656 ##22	ENSHHUG00000004748	ENSHHUG00000004755	ENSHHUG00000004757	vdac2 (ENSHHUG00000004763)	ENSHHUG00000004947	ENSHHUG00000005096	kcnh1a (ENSHHUG00000005103)	mrpl57 (ENSHHUG00000005184)	PLCE1 (ENSHHUG00000005190)	hif1an (ENSHHUG00000005254)	wnt8b (ENSHHUG00000005332)	scdb (ENSHHUG00000005369)	ENSHHUG00000005419	SPOCK2 (ENSHHUG00000005428)	tysnd1 (ENSHHUG00000005434)
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	13	pip5k1ba (ENSELUG00000011993)	zgc:103482 (ENSELUG00000011872)	EFNA5 (ENSELUG00000034260)	GADD45G (ENSELUG00000011831)	gadd45gb.1 (ENSELUG00000011823)	ENSELUG00000011802	ENSELUG00000028900	ghrb (ENSELUG00000011769)	c7b (ENSELUG00000011733)	c6 (ENSELUG00000011662)	rnf180b (ENSELUG00000011598)	ENSELUG00000011574	ndr1 (ENSELUG00000011567)	ANK1 (ENSELUG00000011547)	ftsj1 (ENSELUG00000011483)	NEFM (ENSELUG00000011468) ##22	neflb (ENSELUG00000011459)	pgam2 (ENSELUG00000011434)	ENSELUG00000011420	crkl (ENSELUG00000011394)	med15 (ENSELUG00000011355)	si:ch211-222n4.2 (ENSELUG00000011289)	smpd4 (ENSELUG00000011271)	TMEM132C (ENSELUG00000011190)	ENSELUG00000011149	ENSELUG00000011126	RIMBP2 (ENSELUG00000011063)	ENSELUG00000011011	sfswap (ENSELUG00000010942)	MMP17 (ENSELUG00000010862)	ULK1 (ENSELUG00000010787)
Northern pike	MODERN SPECIES	5	slc25a16 (ENSELUG00000001254)	alox5a (ENSELUG00000022892)	marchf8 (ENSELUG00000022913)	ENSELUG00000026905	zfand4 (ENSELUG00000022926)	ENSELUG00000023002	anxa11a (ENSELUG00000023085)	dlg5a (ENSELUG00000023155)	KCNMA1 (ENSELUG00000023215)	lrmda (ENSELUG00000023237)	znf503 (ENSELUG00000023250)	ENSELUG00000034245	comtd1 (ENSELUG00000023265)	ENSELUG00000023283	ENSELUG00000027155	ENSELUG00000023291 ##22	ifit8 (ENSELUG00000023296)	ENSELUG00000023308	vdac2 (ENSELUG00000023357)	ENSELUG00000023425	CRIP3 (ENSELUG00000023677)	hhat (ENSELUG00000023687)	KCNH1 (ENSELUG00000023726)	mrpl57 (ENSELUG00000023731)	PLCE1 (ENSELUG00000024002)	hif1an (ENSELUG00000024069)	wnt8b (ENSELUG00000024097)	scdb (ENSELUG00000024135)	trmt2b (ENSELUG00000024144)	dnajb12a (ENSELUG00000024163)	ENSELUG00000024146
Spotted gar	DUPLICATION
Spotted gar	MODERN SPECIES	647	ENSLOCG00000015728	slc22a2 (ENSLOCG00000015725)	igf2r (ENSLOCG00000015707)	si:ch73-111k22.2 (ENSLOCG00000015705)	ENSLOCG00000015704	fez2b (ENSLOCG00000015700)	riox1 (ENSLOCG00000015694)	ENSLOCG00000015692	snu13a (ENSLOCG00000017988)	ENSLOCG00000017987	ftsj1 (ENSLOCG00000015688)	ENSLOCG00000015687	dock5 (ENSLOCG00000015676)	ENSLOCG00000015675	ENSLOCG00000017986	NEFM (ENSLOCG00000015673) ##22	neflb (ENSLOCG00000015672)	pgam2 (ENSLOCG00000015670)	gmcl1 (ENSLOCG00000015668)	ENSLOCG00000015667	tgfa (ENSLOCG00000015665)	fam136a (ENSLOCG00000015664)	snrpg (ENSLOCG00000015662)	pcyox1 (ENSLOCG00000015660)	ENSLOCG00000015658	plpbp (ENSLOCG00000015656)	ENSLOCG00000015653	dusp2 (ENSLOCG00000015652)	ENSLOCG00000015649	ENSLOCG00000015648	adra2b (ENSLOCG00000015645)
Spotted gar	MODERN SPECIES	671	ENSLOCG00000004406	erlin1 (ENSLOCG00000004418)	chuk (ENSLOCG00000004432)	plaua (ENSLOCG00000004467)	vcla (ENSLOCG00000004474)	ENSLOCG00000004496	ap3m1 (ENSLOCG00000004509)	ADK (ENSLOCG00000004521)	KAT6B (ENSLOCG00000004535)	ENSLOCG00000004551	DUSP13 (ENSLOCG00000004561)	ENSLOCG00000004576	SAMD8 (ENSLOCG00000004590)	vdac2 (ENSLOCG00000004602)	ENSLOCG00000004642	ENSLOCG00000004660 ##22	ifit8 (ENSLOCG00000004672)	comtd1 (ENSLOCG00000004687)	znf503 (ENSLOCG00000004723)	lrmda (ENSLOCG00000004734)	kcnma1a (ENSLOCG00000004752)	dlg5a (ENSLOCG00000004786)	ENSLOCG00000004826	anxa11b (ENSLOCG00000004840)	zcchc24 (ENSLOCG00000004863)	ppifb (ENSLOCG00000004875)	zmiz1a (ENSLOCG00000004888)	rps24 (ENSLOCG00000004926)	polr3a (ENSLOCG00000004942)	ENSLOCG00000004968	TBATA (ENSLOCG00000004981)
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Tetrapoda	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Amniota	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Sauria	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Lepidosauria	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Episquamata	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Laterata	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	6	RHOBTB2 (ENSPMRG00000017391)	ENSPMRG00000017374	CHMP7 (ENSPMRG00000017362)	ENSPMRG00000017358	ENSPMRG00000017355	R3HCC1 (ENSPMRG00000017349)	LOXL2 (ENSPMRG00000017343)	ENSPMRG00000017342	ENTPD4 (ENSPMRG00000017312)	SLC25A37 (ENSPMRG00000017292)	NKX3-1 (ENSPMRG00000017285)	ENSPMRG00000017279	STC1 (ENSPMRG00000017272)	ENSPMRG00000017268	ADAM28 (ENSPMRG00000017231)	NEFM (ENSPMRG00000017209) ##22	NEFL (ENSPMRG00000017204)	DOCK5 (ENSPMRG00000015038)	ENSPMRG00000014587	KCTD9 (ENSPMRG00000014576)	ENSPMRG00000014568	EBF2 (ENSPMRG00000014453)	ENSPMRG00000014394	ENSPMRG00000014370	BNIP3L (ENSPMRG00000014354)	DPYSL2 (ENSPMRG00000014333)	ENSPMRG00000014325	ADRA1A (ENSPMRG00000014316)	ENSPMRG00000014295	ENSPMRG00000014289	LRRTM4 (ENSPMRG00000014281)
Common wall lizard	MODERN SPECIES	7	DUSP21 (ENSPMRG00000015334)	ENSPMRG00000015330	SLC35E4 (ENSPMRG00000023743)	TCN2 (ENSPMRG00000023740)	PES1 (ENSPMRG00000023737)	MTFP1 (ENSPMRG00000023735)	SEC14L2 (ENSPMRG00000023732)	RNF215 (ENSPMRG00000023730)	CCDC157 (ENSPMRG00000023727)	SF3A1 (ENSPMRG00000023723)	RHBDD3 (ENSPMRG00000023720)	EWSR1 (ENSPMRG00000023713)	GAS2L1 (ENSPMRG00000023710)	ENSPMRG00000023709	AP1B1 (ENSPMRG00000023699)	ENSPMRG00000023689 ##22	THOC5 (ENSPMRG00000023678)	ENSPMRG00000023675	ENSPMRG00000023673	NIPSNAP1 (ENSPMRG00000023669)	NF2 (ENSPMRG00000023652)	ENSPMRG00000023643	ENSPMRG00000023638	ZMAT5 (ENSPMRG00000023631)	ENSPMRG00000023629	ASCC2 (ENSPMRG00000023625)	MTMR3 (ENSPMRG00000023554)	ENSPMRG00000023518	ENSPMRG00000023511	ENSPMRG00000023505	LIF (ENSPMRG00000023502)
Mammalia	ANCESTRAL SPECIES	27	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000172945	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT01000000222164	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT00940000154909	ENSGT00510000049083.b	ENSGT00390000017668
Theria	ANCESTRAL SPECIES	38	ENSGT00940000158918	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000172945	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000165452.b	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT00940000154909
Marsupialia	ANCESTRAL SPECIES	26	ENSGT00940000154447.a.b.b	ENSGT01030000234575.d.c	ENSGT00950000182932.A.a.b	ENSGT00940000153104.e.b.a.a.a.b	ENSGT00940000161592.i.b	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00390000005989.b	ENSGT00530000063970.c.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT00940000154909
Marsupialia_b	ANCESTRAL SPECIES	23	ENSGT00940000154447.a.b.b	ENSGT01030000234575.d.c.c	ENSGT00950000182932.A.a.b	ENSGT00940000153104.e.b.a.a.a.b	ENSGT00940000161592.i.b	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00390000005989.b	ENSGT00530000063970.c.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT00940000154909	ENSGT00390000014208	ENSGT00940000155847	ENSGT00940000153710.a
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000027951	ENSSHAG00000027942	ENSSHAG00000026818	ENSSHAG00000024893	LOXL2 (ENSSHAG00000016252)	ENTPD4 (ENSSHAG00000031790)	SLC25A37 (ENSSHAG00000021392)	NKX3-1 (ENSSHAG00000015475)	ENSSHAG00000022384	ENSSHAG00000025937	STC1 (ENSSHAG00000026997)	ENSSHAG00000025330	ADAM28 (ENSSHAG00000012316)	ADAMDEC1 (ENSSHAG00000011993)	ENSSHAG00000011334	NEFM (ENSSHAG00000006728) ##22	ENSSHAG00000028159	DOCK5 (ENSSHAG00000002033)	GNRH1 (ENSSHAG00000029017)	KCTD9 (ENSSHAG00000001024)	ENSSHAG00000014469	EBF2 (ENSSHAG00000021589)	PPP2R2A (ENSSHAG00000025445)	BNIP3L (ENSSHAG00000021764)	ENSSHAG00000008277	ENSSHAG00000005644	ENSSHAG00000021277	ENSSHAG00000003196	ENSSHAG00000027206	ENSSHAG00000026380	ENSSHAG00000001601
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000172945	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Atlantogenata	ANCESTRAL SPECIES	62	ENSGT00390000008206	ENSGT00390000005772	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00510000055108	ENSGT00390000012489	ENSGT00940000158390	ENSGT00940000161542	ENSGT00390000013711	ENSGT00940000154191.i.a	ENSGT00940000154191.j	ENSGT00940000154849.b	ENSGT00940000162366	ENSGT00940000155991	ENSGT00940000161893	ENSGT00940000154418.a.b ##22	ENSGT00390000013777	ENSGT00950000183018.a.c	ENSGT01020000230354.B.b.a.b	ENSGT00940000159368	ENSGT00390000009869	ENSGT00390000014052	ENSGT00390000018806	ENSGT00940000157272	ENSGT00390000018130.a.a.b	ENSGT00390000000059	ENSGT00390000004850	ENSGT00390000006208.b	ENSGT00940000157386	ENSGT00730000111077	ENSGT00390000013684
Xenarthra	ANCESTRAL SPECIES	83	ENSGT00580000081898	ENSGT00800000124190	ENSGT00390000008206	ENSGT00390000005772	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00510000055108	ENSGT00390000012489	ENSGT00940000158390	ENSGT00940000161542	ENSGT00390000013711	ENSGT00940000154191.i.a	ENSGT00940000154849.b	ENSGT00940000162366	ENSGT00940000155991	ENSGT00940000154418.a.b ##22	ENSGT00390000013777	ENSGT00950000183018.a.c	ENSGT01020000230354.B.b.a.b	ENSGT00940000159368	ENSGT00390000009869	ENSGT00390000014052	ENSGT00390000018806
Armadillo	MODERN SPECIES	1848	TTC28 (ENSDNOG00000047456)	ENSDNOG00000040940	CHEK2 (ENSDNOG00000017702)	HSCB (ENSDNOG00000011178)	CCDC117 (ENSDNOG00000040848)	XBP1 (ENSDNOG00000034497)	ZNRF3 (ENSDNOG00000007391)	C22orf31 (ENSDNOG00000045541)	KREMEN1 (ENSDNOG00000044370)	EMID1 (ENSDNOG00000037851)	RHBDD3 (ENSDNOG00000018707)	ENSDNOG00000018710	GAS2L1 (ENSDNOG00000035253)	RASL10A (ENSDNOG00000036166)	AP1B1 (ENSDNOG00000018712)	ENSDNOG00000047265 ##22	THOC5 (ENSDNOG00000016572)	NIPSNAP1 (ENSDNOG00000043433)	NF2 (ENSDNOG00000041723)	CABP7 (ENSDNOG00000000895)	ZMAT5 (ENSDNOG00000000899)	UQCR10 (ENSDNOG00000034990)	ASCC2 (ENSDNOG00000000902)	LDLRAD2 (ENSDNOG00000040878)	HSPG2 (ENSDNOG00000002131)	ENSDNOG00000045113	ENSDNOG00000024327	CDC42 (ENSDNOG00000031296)	WNT4 (ENSDNOG00000047719)
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000172945	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Laurasiatheria	ANCESTRAL SPECIES	24	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00990000214190	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00990000214190	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957.f	ENSGT00940000162957.e.a	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00990000214190	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957.f	ENSGT00940000162957.e.a	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00990000214190	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868
Pecora	ANCESTRAL SPECIES	36	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918.j	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000154172.`b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00990000214190	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Yarkand deer	MODERN SPECIES	7	PEBP4 (ENSCHYG00000025076)	RHOBTB2 (ENSCHYG00000025115)	ENSCHYG00000025211	CHMP7 (ENSCHYG00000025352)	R3HCC1 (ENSCHYG00000025446)	LOXL2 (ENSCHYG00000025533)	ENTPD4 (ENSCHYG00000025626)	SLC25A37 (ENSCHYG00000025677)	NKX3-1 (ENSCHYG00000025709)	NKX2-6 (ENSCHYG00000025734)	STC1 (ENSCHYG00000025743)	ENSCHYG00000025762	ADAM28 (ENSCHYG00000025837)	ADAMDEC1 (ENSCHYG00000026439)	ADAM7 (ENSCHYG00000026508)	NEFM (ENSCHYG00000026636) ##22	NEFL (ENSCHYG00000026647)	DOCK5 (ENSCHYG00000026683)	GNRH1 (ENSCHYG00000026755)	KCTD9 (ENSCHYG00000026770)	CDCA2 (ENSCHYG00000026788)	EBF2 (ENSCHYG00000026813)	ENSCHYG00000026841	ENSCHYG00000026854	DPYSL2 (ENSCHYG00000026867)	ADRA1A (ENSCHYG00000004551)	STMN4 (ENSCHYG00000005084)	TRIM35 (ENSCHYG00000005184)	PTK2B (ENSCHYG00000005281)	CHRNA2 (ENSCHYG00000005610)	EPHX2 (ENSCHYG00000005702)
Percora_a	ANCESTRAL SPECIES	24	ENSGT00940000162387	ENSGT00940000158918.j	ENSGT00940000162635.mb.b	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000154172.`b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00990000214190	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Siberian musk deer	MODERN SPECIES	327	RHOBTB2 (ENSMMSG00000012820)	ENSMMSG00000012887	CHMP7 (ENSMMSG00000012943)	R3HCC1 (ENSMMSG00000012970)	LOXL2 (ENSMMSG00000013026)	ENTPD4 (ENSMMSG00000013068)	SLC25A37 (ENSMMSG00000013114)	NKX3-1 (ENSMMSG00000013132)	NKX2-6 (ENSMMSG00000013148)	STC1 (ENSMMSG00000013160)	ENSMMSG00000004320	ENSMMSG00000004334	ADAM28 (ENSMMSG00000004400)	ADAMDEC1 (ENSMMSG00000004507)	ADAM7 (ENSMMSG00000004688)	NEFM (ENSMMSG00000005289) ##22	NEFL (ENSMMSG00000005342)	DOCK5 (ENSMMSG00000005425)	GNRH1 (ENSMMSG00000005726)	KCTD9 (ENSMMSG00000005761)	CDCA2 (ENSMMSG00000005842)	EBF2 (ENSMMSG00000005908)	ENSMMSG00000005972	BNIP3L (ENSMMSG00000006092)	DPYSL2 (ENSMMSG00000006136)	ENSMMSG00000006237	ADRA1A (ENSMMSG00000006243)	ENSMMSG00000006250	ENSMMSG00000006269	ENSMMSG00000006276	STMN4 (ENSMMSG00000006293)
Bovidae	ANCESTRAL SPECIES	14	ENSGT00940000162387	ENSGT00940000158918.j	ENSGT00940000162635.mb.b	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000154172.`b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00990000214190	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Caprinae	ANCESTRAL SPECIES	14	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918.j	ENSGT00940000162635.mb.b	ENSGT00720000108860.n	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a	ENSGT00940000158299
Goat	MODERN SPECIES	27	ENSCHIG00000021504	ENSCHIG00000024704	R3HCC1 (ENSCHIG00000009107)	LOXL2 (ENSCHIG00000015358)	ENTPD4 (ENSCHIG00000017608)	SLC25A37 (ENSCHIG00000009638)	ENSCHIG00000010457	ENSCHIG00000009620	NKX3-1 (ENSCHIG00000010463)	NKX2-6 (ENSCHIG00000023290)	STC1 (ENSCHIG00000010708)	ENSCHIG00000012581	ADAM28 (ENSCHIG00000024308)	ADAMDEC1 (ENSCHIG00000015701)	ADAM7 (ENSCHIG00000015652)	NEFM (ENSCHIG00000019945) ##22	NEFL (ENSCHIG00000011951)	DOCK5 (ENSCHIG00000001085)	GNRH1 (ENSCHIG00000016406)	KCTD9 (ENSCHIG00000015791)	CDCA2 (ENSCHIG00000018580)	EBF2 (ENSCHIG00000023729)	PPP2R2A (ENSCHIG00000007473)	ENSCHIG00000024818	PNMA2 (ENSCHIG00000002000)	DPYSL2 (ENSCHIG00000026845)	ADRA1A (ENSCHIG00000021001)	STMN4 (ENSCHIG00000020412)	TRIM35 (ENSCHIG00000009723)	PTK2B (ENSCHIG00000026234)	CHRNA2 (ENSCHIG00000018927)
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	11	PDLIM2 (ENSOARG00020020511)	C8orf58 (ENSOARG00020020420)	CCAR2 (ENSOARG00020020234)	BIN3 (ENSOARG00020020084)	EGR3 (ENSOARG00020019990)	PEBP4 (ENSOARG00020019900)	RHOBTB2 (ENSOARG00020019759)	ENSOARG00020019730	ENSOARG00020019697	ENTPD4 (ENSOARG00020019615)	SLC25A37 (ENSOARG00020019551)	NKX3-1 (ENSOARG00020019488)	NKX2-6 (ENSOARG00020019459)	STC1 (ENSOARG00020019387)	ADAM7 (ENSOARG00020017810)	NEFM (ENSOARG00020017740) ##22	NEFL (ENSOARG00020017673)	GNRH1 (ENSOARG00020017575)	DOCK5 (ENSOARG00020014672)	KCTD9 (ENSOARG00020014450)	CDCA2 (ENSOARG00020014388)	EBF2 (ENSOARG00020014139)	PPP2R2A (ENSOARG00020013913)	ENSOARG00020013834	PNMA2 (ENSOARG00020013810)	DPYSL2 (ENSOARG00020013413)	ENSOARG00020013277	ADRA1A (ENSOARG00020013199)	STMN4 (ENSOARG00020013017)	TRIM35 (ENSOARG00020012904)	PTK2B (ENSOARG00020012073)
Rambouillet Sheep	MODERN SPECIES	8	PITPNB (ENSOARG00020006771)	TTC28 (ENSOARG00020007037)	CHEK2 (ENSOARG00020007570)	HSCB (ENSOARG00020008236)	CCDC117 (ENSOARG00020008321)	XBP1 (ENSOARG00020008425)	ZNRF3 (ENSOARG00020008521)	C22orf31 (ENSOARG00020008612)	KREMEN1 (ENSOARG00020008677)	EMID1 (ENSOARG00020008841)	RHBDD3 (ENSOARG00020008955)	ENSOARG00020009022	ENSOARG00020009571	RASL10A (ENSOARG00020009632)	AP1B1 (ENSOARG00020009682)	ENSOARG00020009804 ##22	THOC5 (ENSOARG00020009861)	NIPSNAP1 (ENSOARG00020009994)	NF2 (ENSOARG00020010193)	CABP7 (ENSOARG00020013778)	ZMAT5 (ENSOARG00020013858)	UQCR10 (ENSOARG00020013916)	ASCC2 (ENSOARG00020013972)	MTMR3 (ENSOARG00020014351)	HORMAD2 (ENSOARG00020014659)	LIF (ENSOARG00020014753)	OSM (ENSOARG00020014785)	CASTOR1 (ENSOARG00020014862)	TBC1D10A (ENSOARG00020014956)	SF3A1 (ENSOARG00020015078)	ENSOARG00020015125
Bovinae	ANCESTRAL SPECIES	14	ENSGT00940000162387	ENSGT00940000158918.j	ENSGT00940000162635.mb.b	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000154172.`b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00990000214190	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
American bison	MODERN SPECIES	3064															NEFL (ENSBBBG00000010785)	NEFM (ENSBBBG00000010802) ##22	DOCK5 (ENSBBBG00000010849)	GNRH1 (ENSBBBG00000010860)	KCTD9 (ENSBBBG00000001907)	CDCA2 (ENSBBBG00000010883)	EBF2 (ENSBBBG00000010900)	ENSBBBG00000001938	PPP2R2A (ENSBBBG00000010922)	BNIP3L (ENSBBBG00000001943)	PNMA2 (ENSBBBG00000001944)	DPYSL2 (ENSBBBG00000010977)	ADRA1A (ENSBBBG00000001967)	STMN4 (ENSBBBG00000011014)	ENSBBBG00000011020	PTK2B (ENSBBBG00000002002)	CHRNA2 (ENSBBBG00000011130)
Bos	ANCESTRAL SPECIES	10	ENSGT00940000158918.j	ENSGT00940000158918.i.b	ENSGT00940000162635.mb.b.a	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000154172.`b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00990000214190	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Bos_a	ANCESTRAL SPECIES	20	ENSGT00940000162387	ENSGT00940000158918.i.b	ENSGT00940000162635.mb.b.a	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000154172.`b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00990000214190	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Domestic yak	MODERN SPECIES	26	PEBP4 (ENSBGRG00000013188)	ENSBGRG00000013289	ENSBGRG00000013324	CHMP7 (ENSBGRG00000013440)	R3HCC1 (ENSBGRG00000013568)	LOXL2 (ENSBGRG00000013709)	ENTPD4 (ENSBGRG00000013839)	SLC25A37 (ENSBGRG00000014111)	NKX3-1 (ENSBGRG00000014189)	NKX2-6 (ENSBGRG00000014251)	STC1 (ENSBGRG00000014320)	ENSBGRG00000014380	ENSBGRG00000014430	ADAM7 (ENSBGRG00000014923)	ENSBGRG00000015724	NEFM (ENSBGRG00000015744) ##22	NEFL (ENSBGRG00000015850)	ENSBGRG00000015920	DOCK5 (ENSBGRG00000015972)	GNRH1 (ENSBGRG00000016731)	KCTD9 (ENSBGRG00000016782)	CDCA2 (ENSBGRG00000016906)	EBF2 (ENSBGRG00000017109)	PPP2R2A (ENSBGRG00000000395)	ENSBGRG00000000444	ENSBGRG00000000482	PNMA2 (ENSBGRG00000000490)	DPYSL2 (ENSBGRG00000000520)	ADRA1A (ENSBGRG00000000703)	STMN4 (ENSBGRG00000000736)	TRIM35 (ENSBGRG00000000766)
Wild yak	MODERN SPECIES	1486																NEFM (ENSBMUG00000016293) ##22	NEFL (ENSBMUG00000016301)	DOCK5 (ENSBMUG00000016356)	GNRH1 (ENSBMUG00000016371)	KCTD9 (ENSBMUG00000016419)	CDCA2 (ENSBMUG00000016433)	EBF2 (ENSBMUG00000016447)	PPP2R2A (ENSBMUG00000016501)	BNIP3L (ENSBMUG00000016521)	PNMA2 (ENSBMUG00000016534)	DPYSL2 (ENSBMUG00000016569)	ADRA1A (ENSBMUG00000016609)	STMN4 (ENSBMUG00000016672)	TRIM35 (ENSBMUG00000016700)	PTK2B (ENSBMUG00000016777)	CHRNA2 (ENSBMUG00000016831)
Bos_b	ANCESTRAL SPECIES	3	ENSGT00940000162387	ENSGT00940000158918.j	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000154172.`b	ENSGT00950000183031.B.e.b.a.a.a	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Hybrid Bos Indicus	DUPLICATION
Hybrid Bos Indicus	MODERN SPECIES	27	ENSBIXG00005026205	RHOBTB2 (ENSBIXG00005026098)	ENSBIXG00005025709	ENSBIXG00005025600	CHMP7 (ENSBIXG00005025583)	R3HCC1 (ENSBIXG00005025548)	LOXL2 (ENSBIXG00005025479)	SLC25A37 (ENSBIXG00005025367)	NKX3-1 (ENSBIXG00005025337)	NKX2-6 (ENSBIXG00005025314)	STC1 (ENSBIXG00005025303)	ENSBIXG00005004295	ENSBIXG00005025234	ENSBIXG00005025151	ADAM7 (ENSBIXG00005024699)	NEFM (ENSBIXG00005002572) ##22	NEFL (ENSBIXG00005024596)	DOCK5 (ENSBIXG00005024516)	GNRH1 (ENSBIXG00005024264)	KCTD9 (ENSBIXG00005004143)	CDCA2 (ENSBIXG00005024231)	EBF2 (ENSBIXG00005024188)	PPP2R2A (ENSBIXG00005024066)	ENSBIXG00005023958	PNMA2 (ENSBIXG00005023950)	DPYSL2 (ENSBIXG00005004091)	ADRA1A (ENSBIXG00005023744)	STMN4 (ENSBIXG00005023682)	TRIM35 (ENSBIXG00005023617)	PTK2B (ENSBIXG00005023549)	ENSBIXG00005023343
Hybrid Bos Indicus	MODERN SPECIES	8	ENSBIXG00005029956	TTC28 (ENSBIXG00005029942)	CHEK2 (ENSBIXG00005029873)	HSCB (ENSBIXG00005029856)	CCDC117 (ENSBIXG00005029842)	ENSBIXG00005029805	ZNRF3 (ENSBIXG00005029754)	C22orf31 (ENSBIXG00005029738)	KREMEN1 (ENSBIXG00005029695)	EMID1 (ENSBIXG00005029656)	RHBDD3 (ENSBIXG00005029622)	GAS2L1 (ENSBIXG00005029605)	RASL10A (ENSBIXG00005029593)	EWSR1 (ENSBIXG00005029512)	AP1B1 (ENSBIXG00005029397)	ENSBIXG00005029368 ##22	THOC5 (ENSBIXG00005029290)	NF2 (ENSBIXG00005000068)	CABP7 (ENSBIXG00005008047)	UQCR10 (ENSBIXG00005008054)	ASCC2 (ENSBIXG00005008098)	MTMR3 (ENSBIXG00005008145)	HORMAD2 (ENSBIXG00005000132)	LIF (ENSBIXG00005008187)	OSM (ENSBIXG00005008197)	CASTOR1 (ENSBIXG00005008217)	TBC1D10A (ENSBIXG00005008232)	SF3A1 (ENSBIXG00005008248)	CCDC157 (ENSBIXG00005008274)	RNF215 (ENSBIXG00005008305)	SEC14L2 (ENSBIXG00005008352)
Cetacea	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Odontoceti	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Odontoceti_a	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Odontoceti_b	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Monodontidae	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Beluga whale	MODERN SPECIES	4	IARS (ENSDLEG00000006757)	ENSDLEG00000006641	ZNF484 (ENSDLEG00000006635)	ENSDLEG00000006626	ENSDLEG00000006614	CHMP7 (ENSDLEG00000006605)	R3HCC1 (ENSDLEG00000006591)	LOXL2 (ENSDLEG00000006576)	ENTPD4 (ENSDLEG00000006555)	ENSDLEG00000006543	SLC25A37 (ENSDLEG00000006540)	NKX3-1 (ENSDLEG00000006531)	ENSDLEG00000006522	STC1 (ENSDLEG00000006517)	ADAM28 (ENSDLEG00000006489)	NEFM (ENSDLEG00000006476) ##22	NEFL (ENSDLEG00000006467)	ENSDLEG00000006462	DOCK5 (ENSDLEG00000002343)	GNRH1 (ENSDLEG00000001435)	KCTD9 (ENSDLEG00000001415)	CDCA2 (ENSDLEG00000001385)	ENSDLEG00000001380	EBF2 (ENSDLEG00000001316)	ENSDLEG00000001289	PPP2R2A (ENSDLEG00000001272)	BNIP3L (ENSDLEG00000001250)	PNMA2 (ENSDLEG00000001239)	DPYSL2 (ENSDLEG00000001186)	ADRA1A (ENSDLEG00000001167)	STMN4 (ENSDLEG00000001142)
Sperm whale	MODERN SPECIES	20	CCAR2 (ENSPCTG00005014790)	BIN3 (ENSPCTG00005014854)	LOXL2 (ENSPCTG00005015101)	ENTPD4 (ENSPCTG00005015209)	ENSPCTG00005015319	ENSPCTG00005015370	SLC25A37 (ENSPCTG00005015433)	ENSPCTG00005015478	NKX3-1 (ENSPCTG00005015538)	NKX2-6 (ENSPCTG00005000444)	STC1 (ENSPCTG00005000557)	ADAM28 (ENSPCTG00005000741)	ADAMDEC1 (ENSPCTG00005000843)	ADAM7 (ENSPCTG00005000905)	ENSPCTG00005000957	NEFM (ENSPCTG00005000983) ##22	NEFL (ENSPCTG00005001011)	DOCK5 (ENSPCTG00005001083)	GNRH1 (ENSPCTG00005001298)	KCTD9 (ENSPCTG00005001337)	CDCA2 (ENSPCTG00005001413)	ENSPCTG00005001468	EBF2 (ENSPCTG00005001486)	PPP2R2A (ENSPCTG00005001540)	BNIP3L (ENSPCTG00005001600)	PNMA2 (ENSPCTG00005001626)	DPYSL2 (ENSPCTG00005001664)	ADRA1A (ENSPCTG00005001727)	ENSPCTG00005001739	STMN4 (ENSPCTG00005001782)	TRIM35 (ENSPCTG00005001833)
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES	17	ENSBMSG00010002015	CHMP7 (ENSBMSG00010001987)	ENSBMSG00010001963	LOXL2 (ENSBMSG00010001934)	ENTPD4 (ENSBMSG00010001918)	ENSBMSG00010001897	ENSBMSG00010001888	SLC25A37 (ENSBMSG00010001881)	NKX3-1 (ENSBMSG00010001867)	NKX2-6 (ENSBMSG00010001859)	STC1 (ENSBMSG00010001852)	ENSBMSG00010001817	ADAMDEC1 (ENSBMSG00010001768)	ENSBMSG00010001750	ENSBMSG00010001706	NEFM (ENSBMSG00010001692) ##22	NEFL (ENSBMSG00010001677)	DOCK5 (ENSBMSG00010001626)	GNRH1 (ENSBMSG00010001589)	KCTD9 (ENSBMSG00010001525)	CDCA2 (ENSBMSG00010001504)	EBF2 (ENSBMSG00010001470)	PPP2R2A (ENSBMSG00010001403)	ENSBMSG00010001374	PNMA2 (ENSBMSG00010001359)	DPYSL2 (ENSBMSG00010001313)	ADRA1A (ENSBMSG00010001276)	STMN4 (ENSBMSG00010001170)	TRIM35 (ENSBMSG00010001057)	PTK2B (ENSBMSG00010001018)	CHRNA2 (ENSBMSG00010000975)
Blue whale	MODERN SPECIES	5	CHEK2 (ENSBMSG00010013536)	HSCB (ENSBMSG00010013503)	CCDC117 (ENSBMSG00010013467)	XBP1 (ENSBMSG00010013432)	ENSBMSG00010013417	ENSBMSG00010013412	ZNRF3 (ENSBMSG00010013389)	C22orf31 (ENSBMSG00010013377)	KREMEN1 (ENSBMSG00010013364)	EMID1 (ENSBMSG00010013327)	RHBDD3 (ENSBMSG00010013293)	EWSR1 (ENSBMSG00010013203)	GAS2L1 (ENSBMSG00010013126)	RASL10A (ENSBMSG00010013115)	AP1B1 (ENSBMSG00010013066)	ENSBMSG00010013034 ##22	THOC5 (ENSBMSG00010012994)	NIPSNAP1 (ENSBMSG00010012973)	NF2 (ENSBMSG00010012886)	CABP7 (ENSBMSG00010012816)	ZMAT5 (ENSBMSG00010012804)	UQCR10 (ENSBMSG00010012794)	ENSBMSG00010012770	MTMR3 (ENSBMSG00010012659)	ENSBMSG00010012609	LIF (ENSBMSG00010012590)	OSM (ENSBMSG00010012577)	TBC1D10A (ENSBMSG00010012520)	SF3A1 (ENSBMSG00010012454)	CCDC157 (ENSBMSG00010012435)	RNF215 (ENSBMSG00010012420)
Laurasiatheria_b	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00990000214190	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868
Equus	ANCESTRAL SPECIES	24	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957.i	ENSGT00940000162957.j	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00990000214190	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Horse	MODERN SPECIES	11	RHOBTB2 (ENSECAG00000024136)	ENSECAG00000024512	ENSECAG00000036031	CHMP7 (ENSECAG00000024657)	R3HCC1 (ENSECAG00000025013)	LOXL2 (ENSECAG00000025038)	ENTPD4 (ENSECAG00000010493)	SLC25A37 (ENSECAG00000013319)	NKX3-1 (ENSECAG00000001509)	NKX2-6 (ENSECAG00000028673)	STC1 (ENSECAG00000013731)	ENSECAG00000053236	ADAM28 (ENSECAG00000014577)	ADAMDEC1 (ENSECAG00000019922)	ADAM7 (ENSECAG00000020537)	NEFM (ENSECAG00000022370) ##22	NEFL (ENSECAG00000022890)	DOCK5 (ENSECAG00000023607)	GNRH1 (ENSECAG00000010664)	KCTD9 (ENSECAG00000011535)	CDCA2 (ENSECAG00000013188)	ENSECAG00000048777	ENSECAG00000032941	ENSECAG00000051786	EBF2 (ENSECAG00000014179)	PPP2R2A (ENSECAG00000019205)	BNIP3L (ENSECAG00000005770)	PNMA2 (ENSECAG00000008517)	DPYSL2 (ENSECAG00000008662)	ADRA1A (ENSECAG00000015917)	STMN4 (ENSECAG00000044039)
Donkey	MODERN SPECIES	22	RHOBTB2 (ENSEASG00005018788)	ENSEASG00005036097	ENSEASG00005036200	CHMP7 (ENSEASG00005018783)	R3HCC1 (ENSEASG00005018782)	LOXL2 (ENSEASG00005018781)	ENTPD4 (ENSEASG00005018778)	SLC25A37 (ENSEASG00005026222)	NKX3-1 (ENSEASG00005018775)	NKX2-6 (ENSEASG00005018774)	STC1 (ENSEASG00005025792)	ADAM28 (ENSEASG00005018766)	ADAMDEC1 (ENSEASG00005018757)	ENSEASG00005025876	ENSEASG00005018749	NEFM (ENSEASG00005015031) ##22	NEFL (ENSEASG00005015035)	ENSEASG00005032794	DOCK5 (ENSEASG00005015240)	GNRH1 (ENSEASG00005015619)	KCTD9 (ENSEASG00005015621)	CDCA2 (ENSEASG00005015623)	EBF2 (ENSEASG00005015624)	PNMA2 (ENSEASG00005035920)	ENSEASG00005015629	BNIP3L (ENSEASG00005015633)	DPYSL2 (ENSEASG00005015636)	ADRA1A (ENSEASG00005015639)	STMN4 (ENSEASG00005015641)	TRIM35 (ENSEASG00005015643)	PTK2B (ENSEASG00005015727)
Carnivora	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Felidae	ANCESTRAL SPECIES	4	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b.q.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287
Panthera	ANCESTRAL SPECIES	5	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406.a	ENSGT00940000161406.b	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b.q.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00940000162387	ENSGT00940000158918	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406.a	ENSGT00940000161685.A.a	ENSGT00940000161406.b	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b.q.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000160287	ENSGT00940000157326.h
leopard	MODERN SPECIES	49	EGR3 (ENSPPRG00000015837)	PEBP4 (ENSPPRG00000017284)	RHOBTB2 (ENSPPRG00000000275)	CHMP7 (ENSPPRG00000001462)	R3HCC1 (ENSPPRG00000002522)	LOXL2 (ENSPPRG00000003080)	ENTPD4 (ENSPPRG00000003654)	SLC25A37 (ENSPPRG00000003800)	NKX3-1 (ENSPPRG00000004152)	NKX2-6 (ENSPPRG00000004345)	STC1 (ENSPPRG00000004675)	ADAM28 (ENSPPRG00000005754)	ADAMDEC1 (ENSPPRG00000006694)	ENSPPRG00000007410	ENSPPRG00000008890	NEFM (ENSPPRG00000009800) ##22	NEFL (ENSPPRG00000010879)	ENSPPRG00000011381	DOCK5 (ENSPPRG00000013437)	GNRH1 (ENSPPRG00000013600)	KCTD9 (ENSPPRG00000013953)	CDCA2 (ENSPPRG00000017681)	EBF2 (ENSPPRG00000024264)	PPP2R2A (ENSPPRG00000023725)	ENSPPRG00000023377	PNMA2 (ENSPPRG00000017614)	DPYSL2 (ENSPPRG00000000390)	ADRA1A (ENSPPRG00000000941)	ENSPPRG00000001728	TTI2 (ENSPPRG00000002077)	MAK16 (ENSPPRG00000002317)
Cat	MODERN SPECIES	235	BIN3 (ENSFCAG00000005667)	EGR3 (ENSFCAG00000005668)	PEBP4 (ENSFCAG00000029653)	RHOBTB2 (ENSFCAG00000005670)	CHMP7 (ENSFCAG00000031450)	R3HCC1 (ENSFCAG00000012395)	LOXL2 (ENSFCAG00000012400)	ENTPD4 (ENSFCAG00000005417)	SLC25A37 (ENSFCAG00000005418)	NKX3-1 (ENSFCAG00000039688)	NKX2-6 (ENSFCAG00000038582)	STC1 (ENSFCAG00000026611)	ADAM28 (ENSFCAG00000008957)	ADAMDEC1 (ENSFCAG00000003531)	ADAM7 (ENSFCAG00000013087)	NEFM (ENSFCAG00000029288) ##22	NEFL (ENSFCAG00000013441)	DOCK5 (ENSFCAG00000011883)	GNRH1 (ENSFCAG00000029305)	KCTD9 (ENSFCAG00000011885)	CDCA2 (ENSFCAG00000011887)	ENSFCAG00000023720	EBF2 (ENSFCAG00000003607)	PPP2R2A (ENSFCAG00000029721)	BNIP3L (ENSFCAG00000030159)	PNMA2 (ENSFCAG00000032107)	DPYSL2 (ENSFCAG00000005338)	ADRA1A (ENSFCAG00000023739)	TTI2 (ENSFCAG00000015300)	MAK16 (ENSFCAG00000033972)	FUT10 (ENSFCAG00000003845)
Caniformia	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Caniformia_b	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Mustelinae	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
American mink	MODERN SPECIES	363																NEFM (ENSNVIG00000019575) ##22	ENSNVIG00000019578	DOCK5 (ENSNVIG00000019592)	GNRH1 (ENSNVIG00000019664)	KCTD9 (ENSNVIG00000019678)	CDCA2 (ENSNVIG00000019695)	EBF2 (ENSNVIG00000019723)	PPP2R2A (ENSNVIG00000019771)
Canidae	ANCESTRAL SPECIES	31	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734.h	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b.q.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734.h	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b.q.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00980000202976	ENSGT00940000160868
Dog	MODERN SPECIES	18	TTC28 (ENSCAFG00845030026)	ENSCAFG00845030049	CHEK2 (ENSCAFG00845030072)	HSCB (ENSCAFG00845030145)	CCDC117 (ENSCAFG00845030178)	XBP1 (ENSCAFG00845030211)	ZNRF3 (ENSCAFG00845030273)	C26H22orf31 (ENSCAFG00845030307)	KREMEN1 (ENSCAFG00845030328)	EWSR1 (ENSCAFG00845030407)	AP1B1 (ENSCAFG00845030558)	RHBDD3 (ENSCAFG00845030610)	ENSCAFG00845030617	ENSCAFG00845030626	ENSCAFG00845030638	NEFH (ENSCAFG00845030639) ##22	THOC5 (ENSCAFG00845030679)	ENSCAFG00845030707	NIPSNAP1 (ENSCAFG00845030716)	NF2 (ENSCAFG00845030750)	CABP7 (ENSCAFG00845030789)	ASCC2 (ENSCAFG00845030795)	MTMR3 (ENSCAFG00845030822)	HORMAD2 (ENSCAFG00845030894)	LIF (ENSCAFG00845030902)	OSM (ENSCAFG00845030908)	CASTOR1 (ENSCAFG00845018973)	TBC1D10A (ENSCAFG00845019071)	SF3A1 (ENSCAFG00845019174)	CCDC157 (ENSCAFG00845019274)	RNF215 (ENSCAFG00845019371)
Dingo	DUPLICATION
Dingo	MODERN SPECIES	304	BIN3 (ENSCAFG00020012894)	EGR3 (ENSCAFG00020012893)	PEBP4 (ENSCAFG00020012890)	RHOBTB2 (ENSCAFG00020012882)	CHMP7 (ENSCAFG00020012876)	R3HCC1 (ENSCAFG00020012870)	LOXL2 (ENSCAFG00020012866)	ENSCAFG00020012856	SLC25A37 (ENSCAFG00020012855)	NKX3-1 (ENSCAFG00020012847)	ENSCAFG00020012845	STC1 (ENSCAFG00020012841)	ADAM28 (ENSCAFG00020012819)	ADAM7 (ENSCAFG00020012781)	NEFL (ENSCAFG00020012757)	NEFM (ENSCAFG00020012742) ##22	DOCK5 (ENSCAFG00020012698)	GNRH1 (ENSCAFG00020012686)	KCTD9 (ENSCAFG00020012683)	CDCA2 (ENSCAFG00020012668)	EBF2 (ENSCAFG00020012629)	PPP2R2A (ENSCAFG00020012619)	ENSCAFG00020012611	PNMA2 (ENSCAFG00020012608)	ENSCAFG00020012600	DPYSL2 (ENSCAFG00020012592)	ADRA1A (ENSCAFG00020012587)	STMN4 (ENSCAFG00020012576)	ENSCAFG00020012574	TRIM35 (ENSCAFG00020012559)	PTK2B (ENSCAFG00020012533)
Dingo	MODERN SPECIES	108	ENSCAFG00020022437	CHEK2 (ENSCAFG00020022441)	HSCB (ENSCAFG00020022459)	CCDC117 (ENSCAFG00020022460)	ENSCAFG00020000195	ZNRF3 (ENSCAFG00020000221)	C22orf31 (ENSCAFG00020000289)	KREMEN1 (ENSCAFG00020000299)	EMID1 (ENSCAFG00020000340)	RHBDD3 (ENSCAFG00020000365)	ENSCAFG00020000386	GAS2L1 (ENSCAFG00020000479)	RASL10A (ENSCAFG00020000497)	AP1B1 (ENSCAFG00020000520)	ENSCAFG00020000543	ENSCAFG00020000585 ##22	ENSCAFG00020000599	THOC5 (ENSCAFG00020000609)	ENSCAFG00020000620	NF2 (ENSCAFG00020000680)	CABP7 (ENSCAFG00020000690)	ZMAT5 (ENSCAFG00020000699)	UQCR10 (ENSCAFG00020000708)	ASCC2 (ENSCAFG00020000731)	MTMR3 (ENSCAFG00020000752)	ENSCAFG00020000779	LIF (ENSCAFG00020000795)	OSM (ENSCAFG00020000810)	CASTOR1 (ENSCAFG00020000818)	TBC1D10A (ENSCAFG00020000828)	SF3A1 (ENSCAFG00020000838)
Red fox	DUPLICATION
Red fox	MODERN SPECIES	67	BIN3 (ENSVVUG00000005147)	EGR3 (ENSVVUG00000005144)	PEBP4 (ENSVVUG00000005125)	RHOBTB2 (ENSVVUG00000005099)	CHMP7 (ENSVVUG00000005081)	R3HCC1 (ENSVVUG00000005056)	LOXL2 (ENSVVUG00000004974)	ENTPD4 (ENSVVUG00000004962)	SLC25A37 (ENSVVUG00000004950)	ENSVVUG00000004932	NKX2-6 (ENSVVUG00000004929)	STC1 (ENSVVUG00000004921)	ADAM28 (ENSVVUG00000004891)	ADAMDEC1 (ENSVVUG00000004882)	ADAM7 (ENSVVUG00000004873)	NEFM (ENSVVUG00000004862) ##22	NEFL (ENSVVUG00000004852)	ENSVVUG00000004850	ENSVVUG00000004272	ENSVVUG00000004182	GNRH1 (ENSVVUG00000004172)	KCTD9 (ENSVVUG00000004063)	ENSVVUG00000004038	ENSVVUG00000004033	EBF2 (ENSVVUG00000003772)	PPP2R2A (ENSVVUG00000003745)	ENSVVUG00000003696	PNMA2 (ENSVVUG00000003687)	ENSVVUG00000003679	DPYSL2 (ENSVVUG00000003636)	ENSVVUG00000003623
Red fox	MODERN SPECIES	215																NEFH (ENSVVUG00000006070) ##22	ENSVVUG00000006064	THOC5 (ENSVVUG00000003944)	NIPSNAP1 (ENSVVUG00000003689)	NF2 (ENSVVUG00000003621)	CABP7 (ENSVVUG00000003605)	ZMAT5 (ENSVVUG00000003593)	ENSVVUG00000003591	ASCC2 (ENSVVUG00000003570)	MTMR3 (ENSVVUG00000003510)	HORMAD2 (ENSVVUG00000003488)	ENSVVUG00000003483	OSM (ENSVVUG00000003478)	CASTOR1 (ENSVVUG00000003298)	TBC1D10A (ENSVVUG00000003091)	SF3A1 (ENSVVUG00000003075)
Euarchontoglires	ANCESTRAL SPECIES	24	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000172945	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Primates	ANCESTRAL SPECIES	25	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a	ENSGT00940000158299	ENSGT00940000158614
Strepsirrhini	ANCESTRAL SPECIES	25	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Lemuriformes	ANCESTRAL SPECIES	32	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957.a	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b.f	ENSGT00950000182859.A.a.a.b.e	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868
Lemuriformes_a	ANCESTRAL SPECIES	34	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957.a	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b.f	ENSGT00950000182859.A.a.a.b.e	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Coquerels sifaka	MODERN SPECIES	919	PEBP4 (ENSPCOG00000021149)	RHOBTB2 (ENSPCOG00000015995)	ENSPCOG00000000697	CHMP7 (ENSPCOG00000007383)	R3HCC1 (ENSPCOG00000027554)	LOXL2 (ENSPCOG00000022542)	ENTPD4 (ENSPCOG00000010184)	SLC25A37 (ENSPCOG00000028846)	NKX3-1 (ENSPCOG00000024990)	NKX2-6 (ENSPCOG00000021761)	ENSPCOG00000026813	STC1 (ENSPCOG00000019531)	ENSPCOG00000008142	ENSPCOG00000021910	ADAM7 (ENSPCOG00000026532)	NEFM (ENSPCOG00000022965) ##22	NEFL (ENSPCOG00000026085)	DOCK5 (ENSPCOG00000016268)	GNRH1 (ENSPCOG00000024165)	KCTD9 (ENSPCOG00000020414)	CDCA2 (ENSPCOG00000023393)	EBF2 (ENSPCOG00000027078)	PPP2R2A (ENSPCOG00000023269)	BNIP3L (ENSPCOG00000026018)	DPYSL2 (ENSPCOG00000027797)	ADRA1A (ENSPCOG00000028770)	STMN4 (ENSPCOG00000028776)	TRIM35 (ENSPCOG00000016334)	PTK2B (ENSPCOG00000026528)	CHRNA2 (ENSPCOG00000019897)	EPHX2 (ENSPCOG00000027937)
Greater bamboo lemur	MODERN SPECIES	673	EGR3 (ENSPSMG00000006585)	PEBP4 (ENSPSMG00000006592)	RHOBTB2 (ENSPSMG00000006602)	ENSPSMG00000006654	CHMP7 (ENSPSMG00000006684)	R3HCC1 (ENSPSMG00000006721)	LOXL2 (ENSPSMG00000006788)	ENTPD4 (ENSPSMG00000006961)	SLC25A37 (ENSPSMG00000007215)	NKX3-1 (ENSPSMG00000007221)	NKX2-6 (ENSPSMG00000007224)	STC1 (ENSPSMG00000007248)	ADAM28 (ENSPSMG00000007277)	ADAMDEC1 (ENSPSMG00000007297)	ADAM7 (ENSPSMG00000007340)	NEFM (ENSPSMG00000007376) ##22	NEFL (ENSPSMG00000007394)	ENSPSMG00000007401
Haplorrhini	ANCESTRAL SPECIES	27	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a	ENSGT00940000158299	ENSGT00940000158614	ENSGT00530000063668.B
Simiiformes	ANCESTRAL SPECIES	25	ENSGT00940000164765	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00910000147907	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.k.b	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a	ENSGT00940000158299
Catarrhini	ANCESTRAL SPECIES	15	ENSGT00940000165140	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00910000147907	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.k.b.a	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT00960000186788	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Cercopithecidae	ANCESTRAL SPECIES	14	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00910000147907	ENSGT00940000158607	ENSGT00910000147038	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.k.b.a	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000010355.r	ENSGT00390000013415.a.b	ENSGT00960000186788	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868
Cercopithecinae	ANCESTRAL SPECIES	16	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000155597.n.b	ENSGT00940000158607	ENSGT00910000147038	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.k.b.a	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000010355.r	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Vervet Monkey	MODERN SPECIES	27	TNFRSF10B (ENSCSAG00000016289)	TNFRSF10C (ENSCSAG00000016281)	TNFRSF10D (ENSCSAG00000016271)	TNFRSF10A (ENSCSAG00000016263)	CHMP7 (ENSCSAG00000016259)	R3HCC1 (ENSCSAG00000016250)	LOXL2 (ENSCSAG00000016241)	ENTPD4 (ENSCSAG00000016236)	SLC25A37 (ENSCSAG00000016232)	NKX3-1 (ENSCSAG00000016229)	NKX2-6 (ENSCSAG00000016228)	STC1 (ENSCSAG00000016224)	ADAM28 (ENSCSAG00000016220)	ADAMDEC1 (ENSCSAG00000016207)	ADAM7 (ENSCSAG00000016187)	NEFM (ENSCSAG00000016135) ##22	NEFL (ENSCSAG00000016132)	DOCK5 (ENSCSAG00000016128)	GNRH1 (ENSCSAG00000016109)	ENSCSAG00000016100	CDCA2 (ENSCSAG00000016076)	ENSCSAG00000016068	ENSCSAG00000016062	PPP2R2A (ENSCSAG00000016060)	BNIP3L (ENSCSAG00000016055)	PNMA2 (ENSCSAG00000018524)	DPYSL2 (ENSCSAG00000016049)	ADRA1A (ENSCSAG00000016022)	STMN4 (ENSCSAG00000016018)	TRIM35 (ENSCSAG00000016014)	PTK2B (ENSCSAG00000016005)
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000155597.n.b	ENSGT00940000158607	ENSGT00910000147038	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00910000147586	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.k.b.a	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000010355.r	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868
Macaca	ANCESTRAL SPECIES	14	ENSGT00940000165140	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00910000147038	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00910000147586	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.k.b.a	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000010355.r	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a
Pig-tailed macaque	MODERN SPECIES	579	ENSMNEG00000044970	TNFRSF10A (ENSMNEG00000034319)	TNFRSF10D (ENSMNEG00000042359)	CHMP7 (ENSMNEG00000035503)	R3HCC1 (ENSMNEG00000043283)	LOXL2 (ENSMNEG00000041821)	ENTPD4 (ENSMNEG00000028969)	ENSMNEG00000042125	SLC25A37 (ENSMNEG00000033209)	NKX3-1 (ENSMNEG00000029607)	NKX2-6 (ENSMNEG00000029977)	STC1 (ENSMNEG00000044899)	ADAM28 (ENSMNEG00000035956)	ADAMDEC1 (ENSMNEG00000027019)	ADAM7 (ENSMNEG00000041516)	NEFM (ENSMNEG00000028916) ##22	NEFL (ENSMNEG00000039854)	ENSMNEG00000022002	DOCK5 (ENSMNEG00000043546)	GNRH1 (ENSMNEG00000042496)	KCTD9 (ENSMNEG00000044328)	CDCA2 (ENSMNEG00000036287)	ENSMNEG00000035457 ##12	EBF2 (ENSMNEG00000040606)	ENSMNEG00000010649	PPP2R2A (ENSMNEG00000023471)	ENSMNEG00000039270	BNIP3L (ENSMNEG00000032945)	PNMA2 (ENSMNEG00000021767)	ENSMNEG00000040560	DPYSL2 (ENSMNEG00000031797)
Macaca_a	ANCESTRAL SPECIES	16	ENSGT00940000164765	ENSGT00940000165140	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.k.b.a	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a	ENSGT00940000158299
Rhesus	MODERN SPECIES	18	TNFRSF10A (ENSMMUG00000007542)	CHMP7 (ENSMMUG00000016653)	R3HCC1 (ENSMMUG00000016655)	LOXL2 (ENSMMUG00000050549)	ENTPD4 (ENSMMUG00000016658)	SLC25A37 (ENSMMUG00000054404)	ENSMMUG00000064526	NKX3-1 (ENSMMUG00000009796)	NKX2-6 (ENSMMUG00000020863)	STC1 (ENSMMUG00000046186)	ADAM28 (ENSMMUG00000005317)	ADAMDEC1 (ENSMMUG00000005318)	ADAM7 (ENSMMUG00000007909)	ENSMMUG00000054167	ENSMMUG00000058642	NEFM (ENSMMUG00000000639) ##22	NEFL (ENSMMUG00000003348)	DOCK5 (ENSMMUG00000008028)	GNRH1 (ENSMMUG00000029018)	KCTD9 (ENSMMUG00000010151)	CDCA2 (ENSMMUG00000010582)	EBF2 (ENSMMUG00000005760)	PPP2R2A (ENSMMUG00000041905)	BNIP3L (ENSMMUG00000023646)	PNMA2 (ENSMMUG00000042420)	DPYSL2 (ENSMMUG00000012718)	ENSMMUG00000055650	ADRA1A (ENSMMUG00000023112)	STMN4 (ENSMMUG00000018670)	TRIM35 (ENSMMUG00000010092)	PTK2B (ENSMMUG00000019159)
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000155597.n.b	ENSGT00940000158607	ENSGT00910000147038	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00910000147586	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.k.b.a	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000010355.r	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868
Olive baboon	MODERN SPECIES	18	TNFRSF10A (ENSPANG00000005889)	CHMP7 (ENSPANG00000024531)	R3HCC1 (ENSPANG00000000453)	LOXL2 (ENSPANG00000011564)	ENTPD4 (ENSPANG00000000652)	SLC25A37 (ENSPANG00000000653)	NKX3-1 (ENSPANG00000004934)	NKX2-6 (ENSPANG00000019014)	STC1 (ENSPANG00000048289)	ENSPANG00000005177	ADAM28 (ENSPANG00000005176)	ADAMDEC1 (ENSPANG00000022045)	ADAM7 (ENSPANG00000017131)	ENSPANG00000030915	ENSPANG00000038971	NEFM (ENSPANG00000018460) ##22	NEFL (ENSPANG00000011988)	DOCK5 (ENSPANG00000005750)	KCTD9 (ENSPANG00000019100)	CDCA2 (ENSPANG00000008115)	EBF2 (ENSPANG00000020231)	ENSPANG00000048024	PNMA2 (ENSPANG00000007854)	DPYSL2 (ENSPANG00000024528)	ADRA1A (ENSPANG00000024527)	STMN4 (ENSPANG00000007322)	TRIM35 (ENSPANG00000017759)	PTK2B (ENSPANG00000019189)	CHRNA2 (ENSPANG00000015733)	EPHX2 (ENSPANG00000001096)	CLU (ENSPANG00000024524)
Cercopithecinae_d	ANCESTRAL SPECIES	50	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000155597.n.b	ENSGT00940000158607	ENSGT00910000147038	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00910000147586	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.k.b.a	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000012635.a.b	ENSGT00390000010355.r	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a
Drill	MODERN SPECIES	1597	TNFRSF10B (ENSMLEG00000007326)	TNFRSF10C (ENSMLEG00000030860)	TNFRSF10D (ENSMLEG00000041434)	TNFRSF10A (ENSMLEG00000020511)	CHMP7 (ENSMLEG00000038524)	R3HCC1 (ENSMLEG00000030147)	LOXL2 (ENSMLEG00000032557)	ENTPD4 (ENSMLEG00000038873)	ENSMLEG00000037670	SLC25A37 (ENSMLEG00000041430)	ENSMLEG00000021718	STC1 (ENSMLEG00000042227)	ADAM28 (ENSMLEG00000023044)	ADAMDEC1 (ENSMLEG00000032559)	ADAM7 (ENSMLEG00000041479)	NEFM (ENSMLEG00000042956) ##22	NEFL (ENSMLEG00000010768)	DOCK5 (ENSMLEG00000037214)	GNRH1 (ENSMLEG00000042529)	KCTD9 (ENSMLEG00000034270)	CDCA2 (ENSMLEG00000041453)
Sooty mangabey	MODERN SPECIES	555	TNFRSF10D (ENSCATG00000043425)	TNFRSF10A (ENSCATG00000029264)	CHMP7 (ENSCATG00000015291)	R3HCC1 (ENSCATG00000032971)	LOXL2 (ENSCATG00000038025)	ENTPD4 (ENSCATG00000041935)	ENSCATG00000036960	ENSCATG00000035953	SLC25A37 (ENSCATG00000035944)	NKX3-1 (ENSCATG00000008649)	NKX2-6 (ENSCATG00000045337)	STC1 (ENSCATG00000026956)	ADAM28 (ENSCATG00000043598)	ADAMDEC1 (ENSCATG00000043054)	ADAM7 (ENSCATG00000041478)	NEFM (ENSCATG00000042530) ##22	NEFL (ENSCATG00000042551)	ENSCATG00000030152	DOCK5 (ENSCATG00000043562)	GNRH1 (ENSCATG00000041582)	KCTD9 (ENSCATG00000038906)	CDCA2 (ENSCATG00000031991)	EBF2 (ENSCATG00000039203)	PPP2R2A (ENSCATG00000037089)	ENSCATG00000045206	ENSCATG00000045185	BNIP3L (ENSCATG00000036601)	PNMA2 (ENSCATG00000017448)	DPYSL2 (ENSCATG00000034654)	ADRA1A (ENSCATG00000045125)	STMN4 (ENSCATG00000022939)
Rhinopithecus	ANCESTRAL SPECIES	55								ENSGT00940000158607	ENSGT00910000147038	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.k.b.a	ENSGT00940000154314.k.b.b.a	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000010355.r	ENSGT00390000013415.a.b	ENSGT00960000186788	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a
Black snub-nosed monkey	MODERN SPECIES	98		TNFRSF10A (ENSRBIG00000030697)	CHMP7 (ENSRBIG00000002287)	R3HCC1 (ENSRBIG00000028045)	LOXL2 (ENSRBIG00000040838)	ENTPD4 (ENSRBIG00000006283)	ENSRBIG00000006016	ENSRBIG00000038195	SLC25A37 (ENSRBIG00000032128)	NKX3-1 (ENSRBIG00000023436)	NKX2-6 (ENSRBIG00000041260)	STC1 (ENSRBIG00000032107)	ADAM28 (ENSRBIG00000020078)	ADAMDEC1 (ENSRBIG00000032045)	ADAM7 (ENSRBIG00000022906)	NEFM (ENSRBIG00000044501) ##22	NEFL (ENSRBIG00000033397)	DOCK5 (ENSRBIG00000022198)	GNRH1 (ENSRBIG00000042433)	ENSRBIG00000044540	CDCA2 (ENSRBIG00000039250)	ENSRBIG00000026024	EBF2 (ENSRBIG00000011662)	PPP2R2A (ENSRBIG00000028497)	ENSRBIG00000031494	BNIP3L (ENSRBIG00000043157)	ENSRBIG00000006170	PNMA2 (ENSRBIG00000016543)	DPYSL2 (ENSRBIG00000038509)	ADRA1A (ENSRBIG00000043723)	STMN4 (ENSRBIG00000039520)
Golden snub-nosed monkey	MODERN SPECIES	2058																NEFM (ENSRROG00000023277) ##22	NEFL (ENSRROG00000037096)	DOCK5 (ENSRROG00000028212)	GNRH1 (ENSRROG00000043250)	KCTD9 (ENSRROG00000032392)	CDCA2 (ENSRROG00000035636)	EBF2 (ENSRROG00000034779)	PPP2R2A (ENSRROG00000041692)	ENSRROG00000038154	BNIP3L (ENSRROG00000031724)	ENSRROG00000036299	PNMA2 (ENSRROG00000020262)	DPYSL2 (ENSRROG00000040914)	ADRA1A (ENSRROG00000041301)	STMN4 (ENSRROG00000042832)	TRIM35 (ENSRROG00000030715)
Hominoidea	ANCESTRAL SPECIES	14	ENSGT00940000164765	ENSGT00940000165140	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.k.b.a	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT00960000186788	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Hominidae	ANCESTRAL SPECIES	15	ENSGT00940000165140	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00550000076401	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.k.b.a	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT00960000186788	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	13	ENSGT00940000165140	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00550000076401	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.k.b.a	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000010355.q.b	ENSGT00390000013415.a.b	ENSGT00960000186788	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868
Gorilla	MODERN SPECIES	21	TNFRSF10C (ENSGGOG00000037003)	TNFRSF10D (ENSGGOG00000008019)	TNFRSF10A (ENSGGOG00000002170)	CHMP7 (ENSGGOG00000002536)	R3HCC1 (ENSGGOG00000013817)	LOXL2 (ENSGGOG00000013825)	ENTPD4 (ENSGGOG00000010428)	SLC25A37 (ENSGGOG00000005025)	ENSGGOG00000027906	NKX3-1 (ENSGGOG00000041851)	NKX2-6 (ENSGGOG00000014372)	STC1 (ENSGGOG00000026322)	ADAM28 (ENSGGOG00000017021)	ADAMDEC1 (ENSGGOG00000001215)	ADAM7 (ENSGGOG00000001012)	NEFM (ENSGGOG00000009880) ##22	NEFL (ENSGGOG00000001429)	DOCK5 (ENSGGOG00000004460)	GNRH1 (ENSGGOG00000004479)	KCTD9 (ENSGGOG00000004480)	CDCA2 (ENSGGOG00000022784)	EBF2 (ENSGGOG00000001585)	PPP2R2A (ENSGGOG00000011500)	ENSGGOG00000027436	BNIP3L (ENSGGOG00000041240)	ENSGGOG00000038243	PNMA2 (ENSGGOG00000043329)	DPYSL2 (ENSGGOG00000000194)	ADRA1A (ENSGGOG00000000511)	ENSGGOG00000003341	ENSGGOG00000010652
Homo/Pan group	ANCESTRAL SPECIES	12	ENSGT00940000165140	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00550000076401	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.l	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000010355.q.b	ENSGT00390000013415.a.b	ENSGT00960000186788	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868
Human	MODERN SPECIES	20	ENSG00000284956	TNFRSF10C (ENSG00000173535)	TNFRSF10D (ENSG00000173530)	TNFRSF10A (ENSG00000104689)	CHMP7 (ENSG00000147457)	R3HCC1 (ENSG00000104679)	LOXL2 (ENSG00000134013)	ENTPD4 (ENSG00000197217)	SLC25A37 (ENSG00000147454)	NKX3-1 (ENSG00000167034)	NKX2-6 (ENSG00000180053)	STC1 (ENSG00000159167)	ADAM28 (ENSG00000042980)	ADAMDEC1 (ENSG00000134028)	ADAM7 (ENSG00000069206)	NEFM (ENSG00000104722) ##22	NEFL (ENSG00000277586)	DOCK5 (ENSG00000147459)	GNRH1 (ENSG00000147437)	KCTD9 (ENSG00000104756)	CDCA2 (ENSG00000184661)	EBF2 (ENSG00000221818)	PPP2R2A (ENSG00000221914)	BNIP3L (ENSG00000104765)	PNMA2 (ENSG00000240694)	DPYSL2 (ENSG00000092964)	ADRA1A (ENSG00000120907)	STMN4 (ENSG00000015592)	TRIM35 (ENSG00000104228)	PTK2B (ENSG00000120899)	CHRNA2 (ENSG00000120903)
Pan	ANCESTRAL SPECIES	30	ENSGT00940000165140	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00550000076401	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.l	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000010355.q.b	ENSGT00390000013415.a.b	ENSGT00960000186788	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868
Bonobo	MODERN SPECIES	21	TNFRSF10D (ENSPPAG00000034029)	TNFRSF10A (ENSPPAG00000040961)	CHMP7 (ENSPPAG00000044136)	R3HCC1 (ENSPPAG00000033165)	LOXL2 (ENSPPAG00000018080)	ENTPD4 (ENSPPAG00000029950)	ENSPPAG00000033689	SLC25A37 (ENSPPAG00000018748)	ENSPPAG00000033094	NKX3-1 (ENSPPAG00000027435)	NKX2-6 (ENSPPAG00000027939)	STC1 (ENSPPAG00000029446)	ADAM28 (ENSPPAG00000035327)	ADAMDEC1 (ENSPPAG00000038047)	ADAM7 (ENSPPAG00000042630)	NEFM (ENSPPAG00000029966) ##22	NEFL (ENSPPAG00000039333)	DOCK5 (ENSPPAG00000040985)	GNRH1 (ENSPPAG00000028067)	ENSPPAG00000030819	CDCA2 (ENSPPAG00000033215)	EBF2 (ENSPPAG00000030675)	PPP2R2A (ENSPPAG00000035123)	ENSPPAG00000033286	BNIP3L (ENSPPAG00000036943)	ENSPPAG00000040176	PNMA2 (ENSPPAG00000033170)	DPYSL2 (ENSPPAG00000035831)	ADRA1A (ENSPPAG00000043804)	ENSPPAG00000043385	TRIM35 (ENSPPAG00000038841)
Chimpanzee	MODERN SPECIES	21	TNFRSF10A (ENSPTRG00000020074)	CHMP7 (ENSPTRG00000020075)	R3HCC1 (ENSPTRG00000020076)	LOXL2 (ENSPTRG00000047037)	ENTPD4 (ENSPTRG00000020078)	ENSPTRG00000044788	SLC25A37 (ENSPTRG00000020079)	ENSPTRG00000042744	ENSPTRG00000052642	NKX3-1 (ENSPTRG00000020081)	NKX2-6 (ENSPTRG00000020082)	STC1 (ENSPTRG00000020083)	ADAM28 (ENSPTRG00000020084)	ADAMDEC1 (ENSPTRG00000020085)	ADAM7 (ENSPTRG00000020086)	NEFM (ENSPTRG00000020087) ##22	NEFL (ENSPTRG00000045792)	DOCK5 (ENSPTRG00000020090)	GNRH1 (ENSPTRG00000020091)	KCTD9 (ENSPTRG00000020092)	CDCA2 (ENSPTRG00000020094)	EBF2 (ENSPTRG00000003058)	PPP2R2A (ENSPTRG00000042450)	ENSPTRG00000047485	BNIP3L (ENSPTRG00000020097)	ENSPTRG00000051226	PNMA2 (ENSPTRG00000051035)	DPYSL2 (ENSPTRG00000020099)	ADRA1A (ENSPTRG00000020100)	ENSPTRG00000045362	STMN4 (ENSPTRG00000020102)
Orangutan	MODERN SPECIES	21	ENSPPYG00000018432	TNFRSF10D (ENSPPYG00000018433)	TNFRSF10A (ENSPPYG00000031309)	CHMP7 (ENSPPYG00000018435)	R3HCC1 (ENSPPYG00000018436)	LOXL2 (ENSPPYG00000018437)	ENSPPYG00000018438	ENSPPYG00000018439	ENSPPYG00000031644	NKX3-1 (ENSPPYG00000018442)	NKX2-6 (ENSPPYG00000018443)	STC1 (ENSPPYG00000018444)	ADAM28 (ENSPPYG00000018445)	ADAMDEC1 (ENSPPYG00000018446)	ADAM7 (ENSPPYG00000018447)	NEFM (ENSPPYG00000018448) ##22	NEFL (ENSPPYG00000018449)	ENSPPYG00000033175 #12	DOCK5 (ENSPPYG00000031126)	GNRH1 (ENSPPYG00000018451)	KCTD9 (ENSPPYG00000018452)	CDCA2 (ENSPPYG00000018453)	EBF2 (ENSPPYG00000018454)	PPP2R2A (ENSPPYG00000018455)	BNIP3L (ENSPPYG00000038394)	ENSPPYG00000033464	PNMA2 (ENSPPYG00000018457)	DPYSL2 (ENSPPYG00000018458)	ADRA1A (ENSPPYG00000018459)	STMN4 (ENSPPYG00000018460)	TRIM35 (ENSPPYG00000018461)
Platyrrhini	ANCESTRAL SPECIES	29	ENSGT00940000164765	ENSGT00940000164831	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00910000147907	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.l	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a	ENSGT00940000158299	ENSGT00940000158614
Cebidae	ANCESTRAL SPECIES	30	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164765	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.l	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a	ENSGT00940000158299
Marmoset	MODERN SPECIES	4	CHMP7 (ENSCJAG00000020123)	R3HCC1 (ENSCJAG00000020118)	LOXL2 (ENSCJAG00000020099)	SLC25A37 (ENSCJAG00000076826)	ENSCJAG00000061125	NKX3-1 (ENSCJAG00000060555)	NKX2-6 (ENSCJAG00000085390)	STC1 (ENSCJAG00000081929)	ENSCJAG00000082609	ENSCJAG00000064111	ADAM28 (ENSCJAG00000020075)	ADAMDEC1 (ENSCJAG00000020062)	ADAM7 (ENSCJAG00000020053)	ENSCJAG00000070069 ##35	ENSCJAG00000076019	NEFM (ENSCJAG00000020047) ##22	ENSCJAG00000082023	ENSCJAG00000010608	NEFL (ENSCJAG00000020035)	DOCK5 (ENSCJAG00000019986)	KCTD9 (ENSCJAG00000019969)	CDCA2 (ENSCJAG00000019958)	ENSCJAG00000084648	EBF2 (ENSCJAG00000019921)	ENSCJAG00000077305	PPP2R2A (ENSCJAG00000019902)	BNIP3L (ENSCJAG00000075722)	DPYSL2 (ENSCJAG00000042451)	ENSCJAG00000084865	ADRA1A (ENSCJAG00000080222)	STMN4 (ENSCJAG00000019866)
Cebidae_a	ANCESTRAL SPECIES	44	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164765	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.l	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a	ENSGT00940000158299
Capuchin	MODERN SPECIES	221	PEBP4 (ENSCCAG00000035666)	RHOBTB2 (ENSCCAG00000027624)	TNFRSF10B (ENSCCAG00000020824)	TNFRSF10A (ENSCCAG00000028468)	CHMP7 (ENSCCAG00000028089)	R3HCC1 (ENSCCAG00000037811)	LOXL2 (ENSCCAG00000032063)	ENTPD4 (ENSCCAG00000022243)	SLC25A37 (ENSCCAG00000029132)	NKX3-1 (ENSCCAG00000029164)	NKX2-6 (ENSCCAG00000030537)	STC1 (ENSCCAG00000029913)	ADAM28 (ENSCCAG00000021142)	ADAMDEC1 (ENSCCAG00000034847)	ADAM7 (ENSCCAG00000028360)	NEFM (ENSCCAG00000028697) ##22	NEFL (ENSCCAG00000035869)	ENSCCAG00000004867	DOCK5 (ENSCCAG00000033128)	GNRH1 (ENSCCAG00000030404)	ENSCCAG00000030611	CDCA2 (ENSCCAG00000026541)	ENSCCAG00000017319
Mas night monkey	MODERN SPECIES	974	TNFRSF10B (ENSANAG00000032145)	TNFRSF10D (ENSANAG00000024101)	TNFRSF10A (ENSANAG00000036835)	CHMP7 (ENSANAG00000019835)	R3HCC1 (ENSANAG00000036169)	LOXL2 (ENSANAG00000021247)	ENTPD4 (ENSANAG00000038166)	ENSANAG00000034733	SLC25A37 (ENSANAG00000035262)	NKX3-1 (ENSANAG00000037342)	NKX2-6 (ENSANAG00000027024)	STC1 (ENSANAG00000026165)	ADAM28 (ENSANAG00000026076)	ADAMDEC1 (ENSANAG00000023742)	ADAM7 (ENSANAG00000024071)	NEFM (ENSANAG00000029941) ##22	NEFL (ENSANAG00000022798)	DOCK5 (ENSANAG00000032901)	GNRH1 (ENSANAG00000034874)	ENSANAG00000025804	CDCA2 (ENSANAG00000037820)	EBF2 (ENSANAG00000022835)	PPP2R2A (ENSANAG00000033237)	BNIP3L (ENSANAG00000025801)	ENSANAG00000031085	DPYSL2 (ENSANAG00000034307)	ENSANAG00000034640	ADRA1A (ENSANAG00000022712)	ENSANAG00000032951	STMN4 (ENSANAG00000021238)	TRIM35 (ENSANAG00000034109)
Euarchontoglires_A	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Tree shrew	MODERN SPECIES	42																NEFM (ENSTBEG00000009193) ##22	NEFL (ENSTBEG00000001508)
Glires	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Rodentia	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Rodentia_A	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Sciuridae	ANCESTRAL SPECIES	29	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162957	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314.j	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b	ENSGT01030000234522.C.b.e.a.a.b	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Eurasian red squirrel	MODERN SPECIES	14	BIN3 (ENSSVLG00005004049)	ENSSVLG00005004016	PEBP4 (ENSSVLG00005003991)	RHOBTB2 (ENSSVLG00005003947)	CHMP7 (ENSSVLG00005003902)	R3HCC1 (ENSSVLG00005003877)	LOXL2 (ENSSVLG00005003840)	ENTPD4 (ENSSVLG00005003809)	SLC25A37 (ENSSVLG00005003790)	NKX3-1 (ENSSVLG00005003772)	NKX2-6 (ENSSVLG00005003752)	STC1 (ENSSVLG00005003730)	ADAM28 (ENSSVLG00005003701)	ADAMDEC1 (ENSSVLG00005003660)	ADAM7 (ENSSVLG00005003562)	NEFM (ENSSVLG00005003494) ##22	NEFL (ENSSVLG00005003461)	ENSSVLG00005003443	ENSSVLG00005003428	DOCK5 (ENSSVLG00005003397)	GNRH1 (ENSSVLG00005003367)	KCTD9 (ENSSVLG00005003331)	CDCA2 (ENSSVLG00005003275)	EBF2 (ENSSVLG00005003172)	ENSSVLG00005003080	ENSSVLG00005003040	PNMA2 (ENSSVLG00005003028)	DPYSL2 (ENSSVLG00005002961)	ADRA1A (ENSSVLG00005002931)	ZFP57 (ENSSVLG00005002906)	STMN4 (ENSSVLG00005002831)
Marmotini	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Marmotini_b	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Squirrel	MODERN SPECIES	357																NEFM (ENSSTOG00000019862) ##22	NEFL (ENSSTOG00000019640)	DOCK5 (ENSSTOG00000008718)	GNRH1 (ENSSTOG00000008794)	KCTD9 (ENSSTOG00000008797)	CDCA2 (ENSSTOG00000008812)	EBF2 (ENSSTOG00000007966)	PPP2R2A (ENSSTOG00000023339)	BNIP3L (ENSSTOG00000004029)	DPYSL2 (ENSSTOG00000004052)	ADRA1A (ENSSTOG00000019888)
Hystricomorpha	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Hystricomorpha_a	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Hystricomorpha_b	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Degu	MODERN SPECIES	77	RHOBTB2 (ENSODEG00000007111)	ENSODEG00000007294	ENSODEG00000019474	R3HCC1 (ENSODEG00000007529)	LOXL2 (ENSODEG00000006938)	ENSODEG00000009404	ENTPD4 (ENSODEG00000009788)	SLC25A37 (ENSODEG00000007363)	NKX3-1 (ENSODEG00000007004)	NKX2-6 (ENSODEG00000007413)	STC1 (ENSODEG00000007382)	ADAM28 (ENSODEG00000007875)	ADAMDEC1 (ENSODEG00000008034)	ADAM7 (ENSODEG00000007547)	ENSODEG00000007521	NEFM (ENSODEG00000008392) ##22	NEFL (ENSODEG00000007183)	DOCK5 (ENSODEG00000007523)	GNRH1 (ENSODEG00000007834)	KCTD9 (ENSODEG00000008616)	ENSODEG00000007418	ENSODEG00000006905	EBF2 (ENSODEG00000007640)	ENSODEG00000007854	ENSODEG00000006781	ENSODEG00000007362	ENSODEG00000007526	DPYSL2 (ENSODEG00000007667)	ADRA1A (ENSODEG00000007554)	ENSODEG00000010902	STMN4 (ENSODEG00000006658)
Guinea pig	MODERN SPECIES	4	PITPNB (ENSCPOG00000012298)	TTC28 (ENSCPOG00000027312)	CHEK2 (ENSCPOG00000006172)	HSCB (ENSCPOG00000013423)	CCDC117 (ENSCPOG00000007791)	ENSCPOG00000007796	ZNRF3 (ENSCPOG00000013801)	KREMEN1 (ENSCPOG00000011832)	ENSCPOG00000006010	EMID1 (ENSCPOG00000009491)	RHBDD3 (ENSCPOG00000040565)	EWSR1 (ENSCPOG00000009502)	GAS2L1 (ENSCPOG00000019765)	RASL10A (ENSCPOG00000005291)	AP1B1 (ENSCPOG00000005293)	ENSCPOG00000008028 ##22	THOC5 (ENSCPOG00000010974)	NIPSNAP1 (ENSCPOG00000027132)	NF2 (ENSCPOG00000014504)	CABP7 (ENSCPOG00000014505)	ZMAT5 (ENSCPOG00000035759)	UQCR10 (ENSCPOG00000011197)	ASCC2 (ENSCPOG00000021555)	MTMR3 (ENSCPOG00000002442)	HORMAD2 (ENSCPOG00000002452)	LIF (ENSCPOG00000030370)	ENSCPOG00000031535	CASTOR1 (ENSCPOG00000014581)	TBC1D10A (ENSCPOG00000014584)	SF3A1 (ENSCPOG00000014589)	CCDC157 (ENSCPOG00000014991)
Rodentia_B	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Myomorpha	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Muroidea	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Upper Galilee mountains blind mole rat	MODERN SPECIES	1127							Znrf3 (ENSNGAG00000019253)	Kremen1 (ENSNGAG00000011633)	Emid1 (ENSNGAG00000002174)	Rhbdd3 (ENSNGAG00000017702)	Ewsr1 (ENSNGAG00000012255)	Gas2l1 (ENSNGAG00000002213)	Rasl10a (ENSNGAG00000009419)	ENSNGAG00000018105	Ap1b1 (ENSNGAG00000018340)	ENSNGAG00000004183 ##22	Thoc5 (ENSNGAG00000000814)	Nipsnap1 (ENSNGAG00000013549)	Nf2 (ENSNGAG00000007075)	Cabp7 (ENSNGAG00000000158)	Zmat5 (ENSNGAG00000019083)	ENSNGAG00000017532	Ascc2 (ENSNGAG00000012723)	ENSNGAG00000006808	ENSNGAG00000017021	ENSNGAG00000013765	Hormad2 (ENSNGAG00000013346)	Lif (ENSNGAG00000014360)	ENSNGAG00000006390	Castor1 (ENSNGAG00000021054)	Tbc1d10a (ENSNGAG00000015770)
Muroidea_A	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162427.j	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000163436.n.a	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b.p	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00860000136257	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Cricetinae	ANCESTRAL SPECIES	18	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000163436.n.a	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b.p	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00860000136257	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868	ENSGT00940000157269.a.a
Golden Hamster	MODERN SPECIES	670																ENSMAUG00000017900 ##22	ENSMAUG00000005425	Dock5 (ENSMAUG00000008971)	Gnrh1 (ENSMAUG00000008244)	Kctd9 (ENSMAUG00000012597)	Cdca2 (ENSMAUG00000011109)	Ebf2 (ENSMAUG00000015832)	Ppp2r2a (ENSMAUG00000019855)	Bnip3l (ENSMAUG00000007015)	ENSMAUG00000020770	Dpysl2 (ENSMAUG00000006007)	Adra1a (ENSMAUG00000019248)	Stmn4 (ENSMAUG00000012567)	Trim35 (ENSMAUG00000010808)	Ptk2b (ENSMAUG00000018808)	Chrna2 (ENSMAUG00000009044)
Chinese hamster chok1gshd	MODERN SPECIES	3	Bin3 (ENSCGRG00001014908)	Egr3 (ENSCGRG00001009879)	Rhobtb2 (ENSCGRG00001023228)	Chmp7 (ENSCGRG00001021741)	R3hcc1 (ENSCGRG00001014977)	Loxl2 (ENSCGRG00001000163)	ENSCGRG00001018845	Synb (ENSCGRG00001011259)	Slc25a37 (ENSCGRG00001008508)	Nkx3-1 (ENSCGRG00001019912)	Nkx2-6 (ENSCGRG00001007878)	Stc1 (ENSCGRG00001019183)	Adam28 (ENSCGRG00001009338)	Adamdec1 (ENSCGRG00001013228)	Adam7 (ENSCGRG00001010547)	ENSCGRG00001011263 ##22	Nefl (ENSCGRG00001016408)	Dock5 (ENSCGRG00001021195)	Gnrh1 (ENSCGRG00001000327)	Kctd9 (ENSCGRG00001022797)	Cdca2 (ENSCGRG00001022349)	Ebf2 (ENSCGRG00001001432)	Ppp2r2a (ENSCGRG00001015307)	Bnip3l (ENSCGRG00001021504)	Pnma2 (ENSCGRG00001010753)	ENSCGRG00001010421	Dpysl2 (ENSCGRG00001016379)	Adra1a (ENSCGRG00001023093)	Stmn4 (ENSCGRG00001008937)	ENSCGRG00001009280	Trim35 (ENSCGRG00001019610)
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162427.j	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000163436.n.a	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000013415.a.b.p	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00860000136257	ENSGT01030000234527.A.a.b.a.a	ENSGT00940000159105	ENSGT01030000234597.a.b.a	ENSGT00940000160868
Prairie vole	MODERN SPECIES	4	Parp4 (ENSMOCG00000016582)	Cenpj (ENSMOCG00000006479)	ENSMOCG00000011818	Chmp7 (ENSMOCG00000015254)	R3hcc1 (ENSMOCG00000018508)	Loxl2 (ENSMOCG00000021272)	ENSMOCG00000021822	Synb (ENSMOCG00000018779)	Slc25a37 (ENSMOCG00000000710)	Nkx3-1 (ENSMOCG00000001078)	Nkx2-6 (ENSMOCG00000002130)	Stc1 (ENSMOCG00000003351)	Adam28 (ENSMOCG00000010153)	Adamdec1 (ENSMOCG00000021493)	Adam7 (ENSMOCG00000022709)	ENSMOCG00000009013 ##22	Nefl (ENSMOCG00000012988)	Dock5 (ENSMOCG00000009188)	Gnrh1 (ENSMOCG00000003491)	Kctd9 (ENSMOCG00000016913)	Cdca2 (ENSMOCG00000002388)	Ebf2 (ENSMOCG00000007295)	ENSMOCG00000005189	Ppp2r2a (ENSMOCG00000011317)	ENSMOCG00000018617	Pnma2 (ENSMOCG00000003712)	ENSMOCG00000006051	Dpysl2 (ENSMOCG00000016303)	Adra1a (ENSMOCG00000018438)	Stmn4 (ENSMOCG00000015586)	Trim35 (ENSMOCG00000021886)
Murinae	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Mus	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Mus_A	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Mus_B	ANCESTRAL SPECIES																	ENSGT00940000154418.a.b ##22
Mus_C	ANCESTRAL SPECIES	20	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000162427.j	ENSGT00720000108860	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000163436.n.a	ENSGT00940000158607	ENSGT00940000160930	ENSGT00940000162737	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00900000141143	ENSGT00940000161406	ENSGT00940000154418.a.b ##22	ENSGT00940000161685.A.a	ENSGT00940000156208	ENSGT00940000157734	ENSGT00390000008225	ENSGT00940000154314	ENSGT00940000154352.A	ENSGT00950000182859.A.a.a.b	ENSGT00950000182864.a.b.a.y	ENSGT00390000013415.a.b.p	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00860000136257	ENSGT01030000234527.A.a.b.a.a	ENSGT00860000136174	ENSGT00940000159105	ENSGT01030000234597.a.b.a
Steppe mouse	MODERN SPECIES	3084	Tnfrsf10b (ENSMSIG00000024749)	ENSMSIG00000024730	Chmp7 (ENSMSIG00000024716)	R3hcc1 (ENSMSIG00000024698)	Loxl2 (ENSMSIG00000024664)	ENSMSIG00000024639	ENSMSIG00000024627	Slc25a37 (ENSMSIG00000024616)	Nkx3-1 (ENSMSIG00000024609)	Nkx2-6 (ENSMSIG00000024600)	ENSMSIG00000024592	Stc1 (ENSMSIG00000024577)	Adam28 (ENSMSIG00000024389)	Adamdec1 (ENSMSIG00000024360)	Adam7 (ENSMSIG00000024335)	ENSMSIG00000024304 ##22	Nefl (ENSMSIG00000024282)	Dock5 (ENSMSIG00000024135)	ENSMSIG00000024123	Kctd9 (ENSMSIG00000024015)	Cdca2 (ENSMSIG00000023962)
Rat	DUPLICATION
Rat	MODERN SPECIES	6	R3hcc1 (ENSRNOG00000016777)	Loxl2 (ENSRNOG00000016758)	Entpd4 (ENSRNOG00000016321)	Synb (ENSRNOG00000021823)	Slc25a37 (ENSRNOG00000015495)	Nkx3-1 (ENSRNOG00000015477)	Nkx2-6 (ENSRNOG00000021910)	Stc1 (ENSRNOG00000015075)	ENSRNOG00000067366	ENSRNOG00000063939	AABR07018269.1 (ENSRNOG00000031720)	ENSRNOG00000063586	Adam28 (ENSRNOG00000014518)	Adamdec1 (ENSRNOG00000030724)	Adam7 (ENSRNOG00000014054)	Nefm (ENSRNOG00000013916) ##22	Nefl (ENSRNOG00000013658)	LOC120097172 (ENSRNOG00000031532)	Dock5 (ENSRNOG00000024703)	Gnrh1 (ENSRNOG00000013433)	Kctd9 (ENSRNOG00000012951)	Gnrh1 (ENSRNOG00000066847)	Cdca2 (ENSRNOG00000025302)	Ebf2 (ENSRNOG00000011548)	Ppp2r2a (ENSRNOG00000011158)	Bnip3l (ENSRNOG00000009820)	Pnma2 (ENSRNOG00000009815)	Dpysl2 (ENSRNOG00000009625)	Adra1a (ENSRNOG00000009522)	Stmn4 (ENSRNOG00000053334)	Trim35 (ENSRNOG00000009449)
Rat	MODERN SPECIES	5	Urgcp (ENSRNOG00000012184)	Mrps24 (ENSRNOG00000011979)	ENSRNOG00000069799	AC136588.2 (ENSRNOG00000030988)	Ankrd36 (ENSRNOG00000056767)	Ccdc117 (ENSRNOG00000010706)	Xbp1 (ENSRNOG00000010298)	Znrf3 (ENSRNOG00000067305)	Kremen1 (ENSRNOG00000051487)	Emid1 (ENSRNOG00000033575)	Rhbdd3 (ENSRNOG00000027032)	Ewsr1 (ENSRNOG00000009437)	Rasl10a (ENSRNOG00000008951)	Gas2l1 (ENSRNOG00000009040)	Ap1b1 (ENSRNOG00000008786)	Nefh (ENSRNOG00000008716) ##22	Thoc5 (ENSRNOG00000008456)	Nipsnap1 (ENSRNOG00000008374)	Nf2 (ENSRNOG00000007948)	Cabp7 (ENSRNOG00000057703)	Zmat5 (ENSRNOG00000007849)	Uqcr10 (ENSRNOG00000059061)	Ascc2 (ENSRNOG00000007349)	Mtmr3 (ENSRNOG00000007120)	Hormad2 (ENSRNOG00000037865)	Lif (ENSRNOG00000007002)	Osm (ENSRNOG00000024390)	Castor1 (ENSRNOG00000006740)	Tbc1d10a (ENSRNOG00000006394)	Sf3a1 (ENSRNOG00000005218)	Ccdc157 (ENSRNOG00000005147)
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	1579	ENSCMIG00000007406	gal3st1a (ENSCMIG00000007408)	pes1 (ENSCMIG00000007412)	CASTOR1 (ENSCMIG00000007454)	RASAL1 (ENSCMIG00000007472)	DTX1 (ENSCMIG00000007495)	ENSCMIG00000007503	ENSCMIG00000007506	ENSCMIG00000007509	ENSCMIG00000007511	EWSR1 (ENSCMIG00000007520)	ENSCMIG00000007528	rasl10a (ENSCMIG00000007531)	ap1b1 (ENSCMIG00000007577)	ENSCMIG00000007710	ENSCMIG00000007714 ##22	ENSCMIG00000007717	thoc5 (ENSCMIG00000007816)	ENSCMIG00000008001	MTMR3 (ENSCMIG00000008020)	ascc2 (ENSCMIG00000008044)	CMKLR2 (ENSCMIG00000008047)	uqcr10 (ENSCMIG00000008050)	zmat5 (ENSCMIG00000008053)	ENSCMIG00000008058	CABP7 (ENSCMIG00000008061)	nf2a (ENSCMIG00000008135)	nipsnap1 (ENSCMIG00000008391)	ENSCMIG00000008453	ddx54 (ENSCMIG00000008464)	ENSCMIG00000008541
Elephant shark	MODERN SPECIES	1488	ENSCMIG00000009606	ENSCMIG00000009601	rassf4a (ENSCMIG00000009597)	PAOX (ENSCMIG00000009591)	mtg1 (ENSCMIG00000009584)	ENSCMIG00000009581	echs1 (ENSCMIG00000009576)	fuom (ENSCMIG00000009572)	caly (ENSCMIG00000009570)	msx3 (ENSCMIG00000009568)	znf511 (ENSCMIG00000009564)	tubgcp2 (ENSCMIG00000009542)	ENSCMIG00000009508	spef1 (ENSCMIG00000009498)	ENSCMIG00000009491	ENSCMIG00000009484 ##22	vdac2 (ENSCMIG00000009404)	SAMD8 (ENSCMIG00000009359)	si:ch211-223p8.8 (ENSCMIG00000009357)	DUSP13 (ENSCMIG00000009355)	ENSCMIG00000009352	KAT6B (ENSCMIG00000009349)	adk (ENSCMIG00000009344)	ENSCMIG00000009342	ap3m1 (ENSCMIG00000009340)	vcla (ENSCMIG00000009326)	ENSCMIG00000009309	chuk (ENSCMIG00000009162)	erlin1 (ENSCMIG00000009049)	ENSCMIG00000009033	ENSCMIG00000009030
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Elephant shark	MODERN SPECIES	2408															INA (ENSCMIG00000006514) #22	ENSCMIG00000006516 ##22	PCGF6 (ENSCMIG00000006517) #21
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Eupercaria	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Eupecaria_B	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Eupecaria_C	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
Eupercaria_incertae_sedis	ANCESTRAL SPECIES																	ENSGT00940000154418.b ##22
European seabass	MODERN SPECIES	9	ENSDLAG00005008595	ENSDLAG00005008625	ube2g1b (ENSDLAG00005008612)	ENSDLAG00005008721	ENSDLAG00005008708	ENSDLAG00005008738	ENSDLAG00005008981	sfswap (ENSDLAG00005008996)	ENSDLAG00005009053	ULK1 (ENSDLAG00005009082)	ENSDLAG00005034631	ENSDLAG00005009189	ENSDLAG00005009209	ENSDLAG00005028312	ENSDLAG00005033489	ENSDLAG00005009241 ##22	ENSDLAG00005009244	ENSDLAG00005009265	ENSDLAG00005026462	ndr1 (ENSDLAG00005031812)	ENSDLAG00005027687	ENSDLAG00005009681	ENSDLAG00005031297	ENSDLAG00005009802	ENSDLAG00005011448	ENSDLAG00005011466	ENSDLAG00005032465	ENSDLAG00005011485	rasgef1bb (ENSDLAG00005011529)	ENSDLAG00005012556	snx18b (ENSDLAG00005012573)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000154418 #22
Hagfish	MODERN SPECIES	259														ENSEBUG00000004689	ENSEBUG00000000421	inaa (ENSEBUG00000015246) #22	inpp5f (ENSEBUG00000011641)	ENSEBUG00000010050	ttc36 (ENSEBUG00000002022)	ENSEBUG00000017010	ENSEBUG00000008114	eif1axb (ENSEBUG00000008167)	ENSEBUG00000005106	snx12 (ENSEBUG00000012681)	ENSEBUG00000005097	ENSEBUG00000013516	atp5po (ENSEBUG00000007644)	pdha1b (ENSEBUG00000007453)	ENSEBUG00000000662	ENSEBUG00000012398	CDK19 (ENSEBUG00000014909)