Osteoglossocephalai	ANCESTRAL SPECIES	35	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000160104	ENSGT00510000046773.a.b.c.b	ENSGT00390000016774	ENSGT00530000063801.a.a ##18	ENSGT01030000234599.a.b.d.b.b	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a #23	ENSGT00940000157367.b ##15	ENSGT00510000048561	ENSGT00940000159653.g.b ##12	ENSGT00940000153560.b.b.b.h ##13	ENSGT00940000158756
Clupeocephala	ANCESTRAL SPECIES	5	ENSGT00940000157367.a.a #15	ENSGT00940000178227.b	ENSGT00940000157367.a.b ##15	ENSGT00940000160024	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00390000008221.b	ENSGT00950000183184.b.b #26	ENSGT00940000160724 #27	ENSGT00940000176123	ENSGT00940000158410.g.a.a #30	ENSGT00950000182950.C #31	ENSGT00940000155494.i ##33	ENSGT00940000158410.h ##30	ENSGT00940000157015.j	ENSGT00390000018397 #36	ENSGT01000000214430	ENSGT00940000171795	ENSGT00510000050089.b
Euteleosteomorpha	ANCESTRAL SPECIES		ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00990000211443	ENSGT00950000183045.A.b	ENSGT00970000196672	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00390000008221.b	ENSGT00950000183184.b.b #26	ENSGT00940000160724 #27	ENSGT00940000176123	ENSGT00940000158410.g.a.a #30	ENSGT00950000182950.C #31	ENSGT00530000063688.b.nb.b #32	ENSGT00940000155494.j #33	ENSGT01030000234570.d.b.a.b.b.a.a #34	ENSGT00940000159417 #35	ENSGT00940000169702	ENSGT00940000166534	ENSGT01100000264459
Protacanthopterygii	ANCESTRAL SPECIES	5	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b.g	ENSGT01030000234578.A.b.b.h	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00990000211443	ENSGT00950000183045.A.b	ENSGT00970000196672	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000167614 #24	ENSGT00390000008221.b	ENSGT00950000182935.B.b.c.h #25	ENSGT00950000183184.b.b #26	ENSGT00990000210186	ENSGT00940000160724 #27	ENSGT00940000176123	ENSGT00940000158410.g.a.a #30	ENSGT00950000182950.C #31	ENSGT00530000063688.b.nb.b #32	ENSGT00940000157746.f	ENSGT00390000004038	ENSGT00530000063991.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	428	ENSGT00940000161265.e.a #8	ENSGT01060000248591.a.a.a.b.a.c #10	ENSGT00940000153560.b.b.b.g.a #13	ENSGT00940000159653.g.a.c #12	ENSGT00940000156569.a.a.a #14	ENSGT00940000157367.a.a.e #15	ENSGT01030000234578.A.b.b.h.b	ENSGT00950000183122.C.o #16	ENSGT01040000241311	ENSGT00940000167870	ENSGT00530000063801.a.b.c #18	ENSGT00940000155733.a.b.e #19	ENSGT00390000013127.a.y #20	ENSGT01030000234887	ENSGT00740000115744.h #21	ENSGT00550000075088.a.b.e #22	ENSGT00510000049239.a.c.d #23	ENSGT00940000167614.f.b #24	ENSGT00390000008221.b.c	ENSGT00950000182935.B.b.c.h.b #25	ENSGT00950000183184.b.b.c #26	ENSGT00940000160724.h #27	ENSGT00940000176123.d.b	ENSGT00940000158410.g.a.a.d #30
Salmoninae_a	ANCESTRAL SPECIES	122	ENSGT00950000182951.A.a.b.b #7	ENSGT00940000161265.e.a.c ##8	ENSGT01060000248591.a.a.a.b.a.c #10	ENSGT00940000153560.b.b.b.g.a #13	ENSGT00940000159653.g.a.c #12	ENSGT00940000156569.a.a.a #14	ENSGT00940000157367.a.a.e #15	ENSGT01030000234578.A.b.b.h.b	ENSGT00950000183122.C.o #16	ENSGT00940000166816.a #17	ENSGT00530000063801.a.b.c #18	ENSGT00940000155733.a.b.e #19	ENSGT00390000013127.a.y #20	ENSGT01030000234887	ENSGT00740000115744.h #21	ENSGT00550000075088.a.b.e #22	ENSGT00510000049239.a.c.d #23	ENSGT00940000167614.f.b #24	ENSGT00950000182935.B.b.c.h.b #25	ENSGT00950000183184.b.b.c #26	ENSGT00940000160724.h #27	ENSGT00940000176123.d.b	ENSGT00940000158410.g.a.a.d #30	ENSGT00950000182950.C.i #31	ENSGT00530000063688.b.nb.b.c #32	ENSGT00940000156597.b.a	ENSGT01030000234570.d.b.a.b.b.a.a.d #34	ENSGT00940000159417.l #35	ENSGT00950000182818.D.o	ENSGT00390000018397.n #36	ENSGT01000000214430.l.a.a
Salmo	ANCESTRAL SPECIES	96	ENSGT00940000166738.j.a.b	ENSGT00940000163727.g	ENSGT00950000182951.A.a.b.b #7	ENSGT01060000248591.a.a.a.b.a.c #10	ENSGT00940000153560.b.b.b.g.a #13	ENSGT00940000159653.g.a.c #12	ENSGT00940000156569.a.a.a #14	ENSGT00940000157367.a.a.e #15	ENSGT01030000234578.A.b.b.h.b	ENSGT00950000183122.C.o #16	ENSGT00940000166816.a #17	ENSGT00530000063801.a.b.c #18	ENSGT00940000155733.a.b.e #19	ENSGT00390000013127.a.y #20	ENSGT00740000115744.h #21	ENSGT00550000075088.a.b.e #22	ENSGT00510000049239.a.c.d #23	ENSGT00940000167614.f.b #24	ENSGT00950000182935.B.b.c.h.b #25	ENSGT00950000183184.b.b.c #26	ENSGT00940000160724.h #27	ENSGT00940000176123.d.b	ENSGT00940000158410.g.a.a.d #30	ENSGT00950000182950.C.i #31	ENSGT00530000063688.b.nb.b.c #32	ENSGT00940000156597.b.a	ENSGT01030000234570.d.b.a.b.b.a.a.d #34	ENSGT00940000159417.l #35	ENSGT00950000182818.D.o	ENSGT00390000018397.n #36	ENSGT01100000264143.A #37
Atlantic salmon	MODERN SPECIES	25	ENSSSAG00000003343 #7	ENSSSAG00000109776 #8	ENSSSAG00000096095 #9	ENSSSAG00000003269 #10	ENSSSAG00000121865 #11	pvalb6 (ENSSSAG00000105717) #12	ENSSSAG00000003253 #13	ENSSSAG00000003203 #14	ENSSSAG00000003188 #15	adsl (ENSSSAG00000002543) #16	ENSSSAG00000096081 #17	atf4b (ENSSSAG00000002422) #18	CATD (ENSSSAG00000002280) #19	MIEF1 (ENSSSAG00000002213) #20	ENSSSAG00000002181 #21	UBC9 (ENSSSAG00000002161) #22	ENSSSAG00000002157 #23	ENSSSAG00000050481 #24	syngr1a (ENSSSAG00000120334) #25	ENSSSAG00000085219 #26	itga2b (ENSSSAG00000051488) #27	ENSSSAG00000051438 #28	ENSSSAG00000051432 #29	ENSSSAG00000046916 #30	cdc27 (ENSSSAG00000046681) #31	ENSSSAG00000046638 #32	ENSSSAG00000116807 #33	myl4 (ENSSSAG00000046535) #34	ENSSSAG00000008394 #35	ENSSSAG00000008146 #36	ENSSSAG00000116950 #37
River trout	MODERN SPECIES		ENSSTUG00000005477	ENSSTUG00000005494 #7	ENSSTUG00000005582 #10	ENSSTUG00000005600 #13	ENSSTUG00000005607 #11	pvalb6 (ENSSTUG00000005614) #12	ENSSTUG00000005643 #14	ENSSTUG00000005656 #15	tmem150b (ENSSTUG00000005676)	adsl (ENSSTUG00000005748) #16	ENSSTUG00000007484 #17	atf4b (ENSSTUG00000007490) #18	ENSSTUG00000007493 #19	mief1 (ENSSTUG00000007516) #20	ENSSTUG00000007522 #21	ENSSTUG00000007529 #22	ENSSTUG00000007556 #23	ENSSTUG00000007568 #24	FAM171A2 (ENSSTUG00000007575) #26	itga2b (ENSSTUG00000007596) #27	ENSSTUG00000007623	ENSSTUG00000007670 #30	cdc27 (ENSSTUG00000008676) #31	ENSSTUG00000009311 #32	ENSSTUG00000009358	SCN4A (ENSSTUG00000009501) #35	gh1 (ENSSTUG00000012807)	rdm1 (ENSSTUG00000012821) #36	ENSSTUG00000012833 #37	ENSSTUG00000012842	ENSSTUG00000012870
Oncorhynchus	ANCESTRAL SPECIES	64	ENSGT00950000182951.A.a.b.b #7	ENSGT00940000161265.e.a.c ##8	ENSGT01060000248591.a.a.a.b.a.c #10	ENSGT00940000153560.b.b.b.g.a #13	ENSGT00940000159653.g.a.c #12	ENSGT00940000156569.a.a.a #14	ENSGT00940000157367.a.a.e #15	ENSGT01030000234578.A.b.b.h.b	ENSGT00950000183122.C.o #16	ENSGT00940000166816.a #17	ENSGT00530000063801.a.b.c #18	ENSGT00940000155733.a.b.e #19	ENSGT00390000013127.a.y #20	ENSGT01030000234887	ENSGT00740000115744.h #21	ENSGT00550000075088.a.b.e #22	ENSGT00510000049239.a.c.d #23	ENSGT00940000167614.f.b #24	ENSGT00950000182935.B.b.c.h.b #25	ENSGT00950000183184.b.b.c #26	ENSGT00940000160724.h #27	ENSGT00940000158410.g.a.a.d #30	ENSGT00950000182950.C.i #31	ENSGT00530000063688.b.nb.b.c #32	ENSGT00940000156597.b.a	ENSGT01030000234570.d.b.a.b.b.a.a.d #34	ENSGT00940000159417.l #35	ENSGT00950000182818.D.o	ENSGT00510000050089.b.e.a	ENSGT00950000182858.A.b.b.g.a.i.d	ENSGT00530000063991.a.b
Rainbow trout	MODERN SPECIES	4	ENSOMYG00000035111 #7	ENSOMYG00000035942 ##8	ENSOMYG00000035950 #10	ENSOMYG00000067202	ENSOMYG00000063241	pvalb6 (ENSOMYG00000035985) #12	ENSOMYG00000036001 #14	ENSOMYG00000056746	ENSOMYG00000036011 #15	tmem150b (ENSOMYG00000036021)	adsl (ENSOMYG00000036187) #16	atf4b (ENSOMYG00000037537) #18	ENSOMYG00000037556 #19	ENSOMYG00000037568 #20	ENSOMYG00000037574 #21	ENSOMYG00000037609 #22	il2rb2 (ENSOMYG00000037653) #23	syngr1a (ENSOMYG00000049893) #25	ENSOMYG00000037682 #26	ENSOMYG00000038030 #30	cdc27 (ENSOMYG00000039862) #31	ENSOMYG00000077165 #32	ENSOMYG00000040071	myl4 (ENSOMYG00000040097) #34	ENSOMYG00000040302	gh2 (ENSOMYG00000040998)	ENSOMYG00000074755	ENSOMYG00000041011	ENSOMYG00000070756	ENSOMYG00000041034	ENSOMYG00000023024
Oncorhynchus_a	ANCESTRAL SPECIES	71	ENSGT00950000182951.A.a.b.b #7	ENSGT00940000161265.e.a.c ##8	ENSGT01060000248591.a.a.a.b.a.c #10	ENSGT00940000153560.b.b.b.g.a #13	ENSGT00940000159653.g.a.c #12	ENSGT00940000156569.a.a.a #14	ENSGT00940000157367.a.a.e #15	ENSGT01030000234578.A.b.b.h.b	ENSGT00950000183122.C.o #16	ENSGT00940000166816.a #17	ENSGT00530000063801.a.b.c #18	ENSGT00940000155733.a.b.e #19	ENSGT00390000013127.a.y #20	ENSGT01030000234887	ENSGT00740000115744.h #21	ENSGT00550000075088.a.b.e #22	ENSGT00510000049239.a.c.d #23	ENSGT00940000167614.f.b #24	ENSGT00950000182935.B.b.c.h.b #25	ENSGT00950000183184.b.b.c #26	ENSGT00940000160724.h #27	ENSGT00940000158410.g.a.a.d #30	ENSGT00950000182950.C.i #31	ENSGT00530000063688.b.nb.b.c #32	ENSGT00940000156597.b.a	ENSGT01030000234570.d.b.a.b.b.a.a.d #34	ENSGT00940000159417.l #35	ENSGT00950000182818.D.o	ENSGT01100000264143.A #37	ENSGT00940000179141.b	ENSGT00510000050089.b.e.a
Chinook salmon	MODERN SPECIES	19	ENSOTSG00005022477	ENSOTSG00005022479	ENSOTSG00005022485 #7	ENSOTSG00005022694	ENSOTSG00005022695 #10	ENSOTSG00005022696 #13	pvalb6 (ENSOTSG00005022697) #12	ENSOTSG00005022699 #14	ENSOTSG00005022700 #15	tmem150b (ENSOTSG00005022701)	adsl (ENSOTSG00005022703) #16	atf4b (ENSOTSG00005022991) #18	ENSOTSG00005022993 #19	mief1 (ENSOTSG00005022995) #20	ENSOTSG00005022996 #21	ENSOTSG00005022997 #22	il2rb (ENSOTSG00005022999) #23	ENSOTSG00005023003 #24	syngr1a (ENSOTSG00005023004) #25	FAM171A2 (ENSOTSG00005023005) #26	itga2b (ENSOTSG00005023007) #27	ENSOTSG00005023042 #30	cdc27 (ENSOTSG00005027694) #31	KANSL1 (ENSOTSG00005028793) #32	ENSOTSG00005028800	myl4 (ENSOTSG00005028806) #34	SCN4A (ENSOTSG00005028845) #35	gh1 (ENSOTSG00005037836)	ENSOTSG00005037839 #37	ENSOTSG00005037841	ENSOTSG00005037842
Coho salmon	MODERN SPECIES	1	DNAL4 (ENSOKIG00005037195) ##8	ENSOKIG00005037214 #10	ENSOKIG00005037224 #13	pvalb6 (ENSOKIG00005037232) #12	ENSOKIG00005037267 #14	ENSOKIG00005037287 #15	ENSOKIG00005037301	tmem150b (ENSOKIG00005037309)	adsl (ENSOKIG00005037362) #16	ENSOKIG00005037747 #17	atf4b (ENSOKIG00005037753) #18	ENSOKIG00005037766 #19	MIEF1 (ENSOKIG00005037819) #20	ENSOKIG00005037835 #21	ENSOKIG00005037845	ENSOKIG00005037852 #22	il2rb (ENSOKIG00005037885) #23	ENSOKIG00005037921 #24	ENSOKIG00005037943	syngr1a (ENSOKIG00005037948) #25	ENSOKIG00005001890	FAM171A2 (ENSOKIG00005001900) #26	ENSOKIG00005001905	CRHR1 (ENSOKIG00005002011) #30	cdc27 (ENSOKIG00005002340) #31	KANSL1 (ENSOKIG00005002757) #32	ENSOKIG00005002798	SCN4A (ENSOKIG00005003176) #35	ENSOKIG00005006565	ENSOKIG00005006576 #37	ENSOKIG00005006603
Huchen	MODERN SPECIES	668				ENSHHUG00000019058 #13	pvalb6 (ENSHHUG00000019066) #12	ENSHHUG00000019079 #14	ENSHHUG00000019090 #15	ENSHHUG00000019097	tmem150b (ENSHHUG00000019105)	adsl (ENSHHUG00000019133) #16	ENSHHUG00000019448	ENSHHUG00000019456	ENSHHUG00000019492 #19	mief1 (ENSHHUG00000019551) #20	ENSHHUG00000019555 #21	ENSHHUG00000019563 #22	il2rb (ENSHHUG00000019654) #23	ENSHHUG00000019691 #24	MGAT3 (ENSHHUG00000019696)	syngr1a (ENSHHUG00000019699) #25	FAM171A2 (ENSHHUG00000019703) #26	ENSHHUG00000019717 #27	ENSHHUG00000019727 #27	ENSHHUG00000019853 #27	ENSHHUG00000019859 #27	ENSHHUG00000019867
Salmoninae	ANCESTRAL SPECIES	25	ENSGT00940000156569.a.a.b ##14	ENSGT00940000157367.a.a.f ##15	ENSGT01030000234578.A.b.b.g	ENSGT01030000234578.A.b.b.h.a	ENSGT00950000183122.C.p ##16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b.d ##18	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00940000155733.a.b.f ##19	ENSGT00390000013127.a.x ##20	ENSGT00740000115744.g ##21	ENSGT00990000211443	ENSGT00950000183045.A.b	ENSGT00970000196672	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b.f ##22	ENSGT00510000049239.a.c.c ##23	ENSGT00940000167614.f.a ##24	ENSGT00940000160396	ENSGT00390000008221.b.d	ENSGT00950000182935.B.b.c.h.a ##25	ENSGT00950000183184.b.b.d ##26	ENSGT00940000160724.g ##27	ENSGT00940000157015.j	ENSGT00940000176123.d.a	ENSGT00940000158410.g.a.a.c ##30	ENSGT00950000182950.C.j ##31	ENSGT00530000063688.b.nb.b.d ##32	ENSGT01030000234570.d.b.a.b.b.a.a.c ##34	ENSGT01090000261159	ENSGT00940000159417.m ##35
Salmoninae_a	ANCESTRAL SPECIES	60	ENSGT00940000157367.a.a.f ##15	ENSGT01030000234578.A.b.b.g	ENSGT01030000234578.A.b.b.h.a	ENSGT00950000183122.C.p ##16	ENSGT00940000166816.b ##17	ENSGT00530000063801.a.b.d ##18	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00940000155733.a.b.f ##19	ENSGT00390000013127.a.x ##20	ENSGT00740000115744.g ##21	ENSGT00990000211443	ENSGT00950000183045.A.b	ENSGT00970000196672	ENSGT00510000046773.a.b.c.a.v	ENSGT00510000046773.a.b.c.a.u	ENSGT00550000075088.a.b.f ##22	ENSGT00510000049239.a.c.c ##23	ENSGT00940000167614.f.a ##24	ENSGT00390000008221.b.d	ENSGT00390000008221.b.c	ENSGT00950000182935.B.b.c.h.a ##25	ENSGT00950000183184.b.b.d ##26	ENSGT00940000160724.g ##27	ENSGT00940000176123.d.a	ENSGT00940000158410.g.a.a.c ##30	ENSGT00950000182950.C.j ##31	ENSGT00530000063688.b.nb.b.d ##32	ENSGT01030000234570.d.b.a.b.b.a.a.c ##34	ENSGT00940000159417.m ##35	ENSGT00950000182818.D.p	ENSGT00390000018397.m ##36
Oncorhynchus	ANCESTRAL SPECIES	33	ENSGT00940000156569.a.a.b ##14	ENSGT00940000157367.a.a.f ##15	ENSGT01030000234578.A.b.b.g	ENSGT01030000234578.A.b.b.h.a	ENSGT00950000183122.C.p ##16	ENSGT00940000166816.b ##17	ENSGT00530000063801.a.b.d ##18	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00940000155733.a.b.f ##19	ENSGT00390000013127.a.x ##20	ENSGT00740000115744.g ##21	ENSGT00950000183045.A.b	ENSGT00970000196672	ENSGT00510000046773.a.b.c.a.v	ENSGT00510000046773.a.b.c.a.u	ENSGT00550000075088.a.b.f ##22	ENSGT00510000049239.a.c.c ##23	ENSGT00940000167614.f.a ##24	ENSGT00390000008221.b.d	ENSGT00390000008221.b.c	ENSGT00950000182935.B.b.c.h.a ##25	ENSGT00950000183184.b.b.d ##26	ENSGT00940000160724.g ##27	ENSGT00940000176123.d.a	ENSGT00940000158410.g.a.a.c ##30	ENSGT00950000182950.C.j ##31	ENSGT00530000063688.b.nb.b.d ##32	ENSGT00940000155494.j #33	ENSGT01030000234570.d.b.a.b.b.a.a.c ##34	ENSGT00940000159417.m ##35	ENSGT00950000182818.D.p
Oncorhynchus_a	ANCESTRAL SPECIES	49	ENSGT00940000156569.a.a.b ##14	ENSGT00940000157367.a.a.f ##15	ENSGT01030000234578.A.b.b.g	ENSGT01030000234578.A.b.b.h.a	ENSGT00950000183122.C.p ##16	ENSGT00940000162556.D.a	ENSGT00530000063801.a.b.d ##18	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00940000155733.a.b.f ##19	ENSGT00390000013127.a.x ##20	ENSGT00740000115744.g ##21	ENSGT00950000183045.A.b	ENSGT00970000196672	ENSGT00510000046773.a.b.c.a.v	ENSGT00510000046773.a.b.c.a.u	ENSGT00550000075088.a.b.f ##22	ENSGT00510000049239.a.c.c ##23	ENSGT00940000167614.f.a ##24	ENSGT00390000008221.b.d	ENSGT00950000182935.B.b.c.h.a ##25	ENSGT00950000183184.b.b.d ##26	ENSGT00940000160724.g ##27	ENSGT00940000176123.d.a	ENSGT00940000158410.g.a.a.c ##30	ENSGT00950000182950.C.j ##31	ENSGT00530000063688.b.nb.b.d ##32	ENSGT01030000234570.d.b.a.b.b.a.a.c ##34	ENSGT00940000159417.m ##35	ENSGT00950000182818.D.p	ENSGT00390000018397.m ##36	ENSGT00990000204048.a
Chinook salmon	MODERN SPECIES	33	pvalb6 (ENSOTSG00005044076) ##12	ENSOTSG00005044078 ##14	ENSOTSG00005044080	ENSOTSG00005044081 ##15	tmem150b (ENSOTSG00005044085)	tmem150b (ENSOTSG00005044086)	adsl (ENSOTSG00005044092) ##16	ENSOTSG00005044974	atf4b (ENSOTSG00005000730) ##18	ENSOTSG00005000805	ENSOTSG00005001054 ##19	mief1 (ENSOTSG00005001064) ##20	ENSOTSG00005001070 ##21	mpst (ENSOTSG00005001076)	mpst (ENSOTSG00005001096)	ENSOTSG00005001108 ##22	il2rb (ENSOTSG00005001117) ##23	ENSOTSG00005001126 ##24	MGAT3 (ENSOTSG00005001132)	ENSOTSG00005001137	FAM171A2 (ENSOTSG00005001143) ##26	itga2b (ENSOTSG00005001162) ##27	ENSOTSG00005001177	CRHR1 (ENSOTSG00005001219) ##30	cdc27 (ENSOTSG00005002767) ##31	ENSOTSG00005002783 ##32	ENSOTSG00005002820 #33	myl4 (ENSOTSG00005002851) ##34	SCN4A (ENSOTSG00005003073) ##35	gh1 (ENSOTSG00005010814)	rdm1 (ENSOTSG00005010816) ##36
Coho salmon	MODERN SPECIES	26	pvalb6 (ENSOKIG00005009569) ##12	ENSOKIG00005009576 ##14	ENSOKIG00005009585 ##15	tmem150b (ENSOKIG00005009597)	ENSOKIG00005009624	adsl (ENSOKIG00005009708) ##16	atf4b (ENSOKIG00005010768) ##18	ENSOKIG00005010780 ##17	ENSOKIG00005010797	ENSOKIG00005010811 ##19	mief1 (ENSOKIG00005010863) ##20	ENSOKIG00005010879	ENSOKIG00005010898	mpst (ENSOKIG00005010905)	mpst (ENSOKIG00005010908)	ENSOKIG00005010915 ##22	il2rb (ENSOKIG00005010946) ##23	ENSOKIG00005010959 ##24	MGAT3 (ENSOKIG00005010972)	ENSOKIG00005010981	syngr1a (ENSOKIG00005010989) ##25	FAM171A2 (ENSOKIG00005010995) ##26	itga2b (ENSOKIG00005011009) ##27	ENSOKIG00005011041	CRHR1 (ENSOKIG00005011114) ##30	cdc27 (ENSOKIG00005011890) ##31	KANSL1 (ENSOKIG00005011929) ##32	ENSOKIG00005011972 #33	myl4 (ENSOKIG00005012029) ##34	SCN4A (ENSOKIG00005012123) ##35	gh1 (ENSOKIG00005013511)
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000040203 ##14	ENSOMYG00000040210 ##15	tmem150b (ENSOMYG00000040225)	tmem150b (ENSOMYG00000040236)	ENSOMYG00000065328	adsl (ENSOMYG00000040290) ##16	ENSOMYG00000055578 ##17	atf4b (ENSOMYG00000064242) ##18	ENSOMYG00000040402	ENSOMYG00000040413 ##19	mief1 (ENSOMYG00000040428) ##20	ENSOMYG00000040435 ##21	mpst (ENSOMYG00000040444)	mpst (ENSOMYG00000073920)	ENSOMYG00000061394	ENSOMYG00000040452 ##22	il2rb (ENSOMYG00000040458) ##23	ENSOMYG00000049415 ##24	ENSOMYG00000058628	ENSOMYG00000048055	ENSOMYG00000040470	syngr1a (ENSOMYG00000040478) ##25	ENSOMYG00000040495 ##26	itga2b (ENSOMYG00000040536) ##27	ENSOMYG00000070459	ENSOMYG00000040686 ##30	ENSOMYG00000067916	cdc27 (ENSOMYG00000041429) ##31	ENSOMYG00000041452 ##32	ENSOMYG00000041464 #33	myl4 (ENSOMYG00000041500) ##34
Salmo	ANCESTRAL SPECIES	28	ENSGT00940000157367.a.a.f ##15	ENSGT01030000234578.A.b.b.g.b	ENSGT01030000234578.A.b.b.g.a	ENSGT01030000234578.A.b.b.h.a	ENSGT00950000183122.C.p ##16	ENSGT00940000166816.b ##17	ENSGT00530000063801.a.b.d ##18	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00940000155733.a.b.f ##19	ENSGT00390000013127.a.x ##20	ENSGT00990000211443	ENSGT00950000183045.A.b	ENSGT00970000196672	ENSGT00510000046773.a.b.c.a.v	ENSGT00510000046773.a.b.c.a.u	ENSGT00550000075088.a.b.f ##22	ENSGT00510000049239.a.c.c ##23	ENSGT00940000167614.f.a ##24	ENSGT00390000008221.b.d	ENSGT00390000008221.b.c	ENSGT00950000182935.B.b.c.h.a ##25	ENSGT00950000183184.b.b.d ##26	ENSGT00940000160724.g ##27	ENSGT00940000176123.d.a	ENSGT00940000158410.g.a.a.c ##30	ENSGT00950000182950.C.j ##31	ENSGT00530000063688.b.nb.b.d ##32	ENSGT01030000234570.d.b.a.b.b.a.a.c ##34	ENSGT00940000159417.m ##35	ENSGT00950000182818.D.p	ENSGT00390000018397.m ##36
River trout	MODERN SPECIES	25	ENSSTUG00000015091 ##10	ENSSTUG00000015096 ##13	pvalb6 (ENSSTUG00000015113) ##12	ENSSTUG00000015129 ##14	ENSSTUG00000015140 ##15	tmem150b (ENSSTUG00000015162)	adsl (ENSSTUG00000015232) ##16	ENSSTUG00000015469 ##17	atf4b (ENSSTUG00000015476) ##18	ENSSTUG00000015488	ENSSTUG00000015502 ##19	mief1 (ENSSTUG00000015555) ##20	ENSSTUG00000015572	ENSSTUG00000015588	mpst (ENSSTUG00000015594)	ENSSTUG00000015621 ##22	il2rb (ENSSTUG00000015644) ##23	ENSSTUG00000015662 ##24	mgat3a (ENSSTUG00000036658)	MGAT3 (ENSSTUG00000036662)	syngr1a (ENSSTUG00000036665) ##25	FAM171A2 (ENSSTUG00000036668) ##26	itga2b (ENSSTUG00000036682) ##27	ENSSTUG00000036798	ENSSTUG00000036868 ##30	cdc27 (ENSSTUG00000038672) ##31	KANSL1 (ENSSTUG00000038728) ##32	ENSSTUG00000038760	myl4 (ENSSTUG00000038846) ##34	SCN4A (ENSSTUG00000038914) ##35	gh1 (ENSSTUG00000040780)
Atlantic salmon	MODERN SPECIES	22	adsl (ENSSSAG00000048519) ##16	tmem150b (ENSSSAG00000003179)	tmem150b (ENSSSAG00000048454)	tmem150b (ENSSSAG00000122174)	ENSSSAG00000097685	ENSSSAG00000050210 ##18	ENSSSAG00000050223	ENSSSAG00000118109	ENSSSAG00000050252 ##19	ENSSSAG00000050349 ##20	ENSSSAG00000111814	ENSSSAG00000050360	ENSSSAG00000050378	mpst (ENSSSAG00000084242)	mpst (ENSSSAG00000050388)	UBC9 (ENSSSAG00000050408) ##22	il2rb (ENSSSAG00000050463) ##23	c1qtnf6 (ENSSSAG00000100118) ##24	ENSSSAG00000050491	ENSSSAG00000088899	syngr1a (ENSSSAG00000097289) ##25	ENSSSAG00000050533 ##26	itga2b (ENSSSAG00000050579) ##27	ENSSSAG00000050676	ENSSSAG00000050718 ##30	ENSSSAG00000085507	cdc27 (ENSSSAG00000050808) ##31	ENSSSAG00000050847 ##32	ENSSSAG00000050874 ##33	myl4 (ENSSSAG00000101916) ##34	ENSSSAG00000100194
Huchen	MODERN SPECIES	365	ENSHHUG00000023200 ##13	pvalb6 (ENSHHUG00000023206) ##12	ENSHHUG00000023208 ##14	ENSHHUG00000023212 ##15	tmem150b (ENSHHUG00000023215)	tmem150b (ENSHHUG00000023216)	adsl (ENSHHUG00000023219) ##16	ENSHHUG00000023338 #17	atf4b (ENSHHUG00000023344) ##18	ENSHHUG00000023350	ENSHHUG00000023366 ##19	mief1 (ENSHHUG00000023372) ##20	ENSHHUG00000023376 ##21	mpst (ENSHHUG00000023383)	mpst (ENSHHUG00000023389)	ENSHHUG00000023390 ##22	il2rb (ENSHHUG00000023577) ##23	ENSHHUG00000023580	mgat3a (ENSHHUG00000023581)	syngr1a (ENSHHUG00000023594) ##25	FAM171A2 (ENSHHUG00000023598) ##26	itga2b (ENSHHUG00000023613) ##27	ENSHHUG00000023641	ENSHHUG00000023674
Northern pike	MODERN SPECIES	10	tmem150b (ENSELUG00000010725)	tmem150b (ENSELUG00000032535)	tlr22 (ENSELUG00000033008)	adsl (ENSELUG00000010674) #16	tlr22 (ENSELUG00000033694)	ENSELUG00000010703	tlr22 (ENSELUG00000025821)	ENSELUG00000010634 #17	ENSELUG00000001081 #17	atf4b (ENSELUG00000001208) #18	ENSELUG00000010609	ENSELUG00000010599 #19	mief1 (ENSELUG00000010577) #20	ENSELUG00000010546 #21	mpst (ENSELUG00000010532)	ENSELUG00000010523 #22	il2rb (ENSELUG00000010497) #23	ENSELUG00000000377	mgat3a (ENSELUG00000010460)	ENSELUG00000025393	ENSELUG00000010434	ABCC1 (ENSELUG00000000373)	ENSELUG00000010316	ENSELUG00000010305	ENSELUG00000010272	smarca4a (ENSELUG00000010247)	ldlra (ENSELUG00000010150)	kri1 (ENSELUG00000010137)	spc24 (ENSELUG00000010106)	s1pr5a (ENSELUG00000010090)	foxd7 (ENSELUG00000010078)
Acanthomorphata	ANCESTRAL SPECIES	101	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT01040000241311	ENSGT00940000167870	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00990000211443	ENSGT00950000183045.A.b	ENSGT00970000196672	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396
Euacanthomorphacea	ANCESTRAL SPECIES	5	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00990000211443	ENSGT00950000183045.A.b	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520	ENSGT00390000002762.a.b	ENSGT00390000018509.a
Pinecone sodierfish	MODERN SPECIES	22	ENSMMDG00005011080 #14	ENSMMDG00005011077 #15	tmem150b (ENSMMDG00005011075)	adsl (ENSMMDG00005011023) #16	ENSMMDG00005011010 #17	atf4b (ENSMMDG00005011007) #18	ENSMMDG00005011005	ENSMMDG00005010986 #19	mief1 (ENSMMDG00005010983) #20	ENSMMDG00005010980	ENSMMDG00005010979	ENSMMDG00005010977	ENSMMDG00005010975	TST (ENSMMDG00005010973)	mpst (ENSMMDG00005010971)	ENSMMDG00005010965 #22	il2rb (ENSMMDG00005010957) #23	ENSMMDG00005010954	ENSMMDG00005010953	chst12a (ENSMMDG00005010951)	CARD11 (ENSMMDG00005010434)	ap5z1 (ENSMMDG00005010407)	mmd2a (ENSMMDG00005010351)	wipi2 (ENSMMDG00005010188)	ENSMMDG00005010170	smurf1 (ENSMMDG00005006730)	FSCN1 (ENSMMDG00005006675)	ENSMMDG00005006671	TNRC18 (ENSMMDG00005006669)	slc29a4a (ENSMMDG00005006664)	atp5mf (ENSMMDG00005006656)
Percomorphaceae	ANCESTRAL SPECIES	3	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Tiger tail seahorse	MODERN SPECIES	262	ENSHCOG00000006485 #7	ENSHCOG00000006528 #10	ENSHCOG00000006535 #13	pvalb6 (ENSHCOG00000006608) #12	ENSHCOG00000006739 #14	PDGFB (ENSHCOG00000006777) #15	adsl (ENSHCOG00000006818) #16	ENSHCOG00000006826 #17	atf4b (ENSHCOG00000006835) #18	ENSHCOG00000006846	ENSHCOG00000006853 #19	mief1 (ENSHCOG00000006873) #20	ENSHCOG00000006884 #21	mpst (ENSHCOG00000006897)	mpst (ENSHCOG00000006906)	ENSHCOG00000006919 #22	ENSHCOG00000006940	ENSHCOG00000000207	chst12a (ENSHCOG00000006968)	CARD11 (ENSHCOG00000007033)	ap5z1 (ENSHCOG00000007072)	mmd2a (ENSHCOG00000007105)	wipi2 (ENSHCOG00000007134)	smurf1 (ENSHCOG00000007183)	ENSHCOG00000007204	FSCN1 (ENSHCOG00000007218)	ENSHCOG00000007233	ENSHCOG00000007252	TNRC18 (ENSHCOG00000000247)
Percomorphaceae_B	ANCESTRAL SPECIES	2	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Ovalentaria	ANCESTRAL SPECIES	1	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Ovalentaria_B	ANCESTRAL SPECIES		ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Pomacentridae	ANCESTRAL SPECIES	225										ENSGT00940000157367.a.a #15	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT00740000115744 #21	ENSGT00390000013127.a #20	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23
Pomacentridae_A	ANCESTRAL SPECIES	184										ENSGT00940000157367.a.a #15	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT00740000115744 #21	ENSGT00390000013127.a #20	ENSGT00550000075088.a.b #22	ENSGT00940000177422	ENSGT00510000048539	ENSGT00550000074885	ENSGT00940000167671	ENSGT00940000154700	ENSGT00950000182838.A.a.a	ENSGT00940000167194	ENSGT00940000160972	ENSGT00940000158268.b	ENSGT00440000037417.B.a
Amphiprion	ANCESTRAL SPECIES	226										ENSGT00940000157367.a.a #15	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00940000167870	ENSGT00740000115744 #21	ENSGT00390000013127.a #20	ENSGT00550000075088.a.b #22	ENSGT00940000177422	ENSGT00510000048539	ENSGT00550000074885	ENSGT00940000167671	ENSGT00940000154700	ENSGT00950000182838.A.a.a	ENSGT00940000167194	ENSGT00940000160972	ENSGT00940000158268.b	ENSGT00440000037417.B.a
Clown anemonefish	MODERN SPECIES	1827											adsl (ENSAOCG00000012212) #16	ENSAOCG00000012234 #17	ENSAOCG00000012243	ENSAOCG00000012258 #21	mief1 (ENSAOCG00000012288) #20	ENSAOCG00000012324 #22	ENSAOCG00000012360	mettl22 (ENSAOCG00000012381)	abat (ENSAOCG00000012459)	ENSAOCG00000012481	prmt1 (ENSAOCG00000012529)	AP2A1 (ENSAOCG00000012704)	ENSAOCG00000012737	rras (ENSAOCG00000012766)	prrg2 (ENSAOCG00000012788)	PRR12 (ENSAOCG00000002335)	zgc:113019 (ENSAOCG00000012851)	ENSAOCG00000012875	ENSAOCG00000012885	MED9 (ENSAOCG00000012891)	ENSAOCG00000012942
Orange clownfish	MODERN SPECIES	5	ENSAPEG00000003065	ENSAPEG00000003031	zgc:113019 (ENSAPEG00000003004)	SOX8 (ENSAPEG00000002982)	ENSAPEG00000002969	ENSAPEG00000002944	RAB26 (ENSAPEG00000002898)	ENSAPEG00000002888	ENSAPEG00000002877	ENSAPEG00000002864 #15	adsl (ENSAPEG00000002784) #16	ENSAPEG00000002765 #17	ENSAPEG00000002739	ENSAPEG00000002724 #21	mief1 (ENSAPEG00000002694) #20	ENSAPEG00000002667 #22	ENSAPEG00000002632	mettl22 (ENSAPEG00000002598)	abat (ENSAPEG00000002538)	ENSAPEG00000002521	ENSAPEG00000002499	ENSAPEG00000002473	prmt1 (ENSAPEG00000002435)	AP2A1 (ENSAPEG00000002306)	ENSAPEG00000002290	rras (ENSAPEG00000002251)	prrg2 (ENSAPEG00000002238)	PRR12 (ENSAPEG00000002226)	fbxl16 (ENSAPEG00000002190)	ENSAPEG00000002181	ENSAPEG00000002136
Spiny chromis	MODERN SPECIES	1291											adsl (ENSAPOG00000007080) #16	ENSAPOG00000007041 #17	atf4b (ENSAPOG00000007025) #18	ENSAPOG00000007012 #21	mief1 (ENSAPOG00000006992) #20	ENSAPOG00000006956 #22	ENSAPOG00000006936	mettl22 (ENSAPOG00000006908)
Bicolor damselfish	MODERN SPECIES	555				fbxl16 (ENSSPAG00000013185)	ENSSPAG00000013216	ENSSPAG00000013233	ENSSPAG00000013259	ENSSPAG00000013286 #15	ENSSPAG00000013297	ENSSPAG00000013313	adsl (ENSSPAG00000013331) #16	ENSSPAG00000013388 #17	atf4b (ENSSPAG00000013410) #18	ENSSPAG00000013419 #21	mief1 (ENSSPAG00000013430) #20	ENSSPAG00000013462 #22	ENSSPAG00000013485 #23	ENSSPAG00000013503
Cichlidae	ANCESTRAL SPECIES	19	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Pseudocrenilabrinae	ANCESTRAL SPECIES	1	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C.m.b #16	ENSGT00950000183122.C.m.a #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	27	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C.m.b #16	ENSGT00950000183122.C.m.a #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Haplochromini	ANCESTRAL SPECIES	54	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C.m.b #16	ENSGT00950000183122.C.m.a #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789.n	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000165470.d	ENSGT00390000004541.j	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b
Burton s mouthbrooder	MODERN SPECIES	753									ENSHBUG00000014519 #17	atf4b (ENSHBUG00000014511) #18	ENSHBUG00000014502	ENSHBUG00000014491 #19	mief1 (ENSHBUG00000014430) #20	ENSHBUG00000014407 #21	mpst (ENSHBUG00000014402)	ENSHBUG00000014398 #22	il2rb (ENSHBUG00000014372) #23	ENSHBUG00000014308	chst12a (ENSHBUG00000014302)	CARD11 (ENSHBUG00000014273)	ap5z1 (ENSHBUG00000014221)	mmd2a (ENSHBUG00000014183)	wipi2 (ENSHBUG00000014150)	ENSHBUG00000014076	smurf1 (ENSHBUG00000013857)	RNF216 (ENSHBUG00000013829)	FSCN1 (ENSHBUG00000013818)	ENSHBUG00000013796	ENSHBUG00000013766	ENSHBUG00000013755	slc29a4a (ENSHBUG00000000406)
Haplochromini_A	ANCESTRAL SPECIES	37	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C.m.b #16	ENSGT00950000183122.C.m.a #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789.n	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000165470.d	ENSGT00390000004541.j	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b
Haplochromini_B	ANCESTRAL SPECIES	41	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C.m.b.a #16	ENSGT00950000183122.C.m.b.b #16	ENSGT00940000179111.a	ENSGT00950000183122.C.m.a.a.a #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789.n	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Zebra mbuna	MODERN SPECIES	1107	ENSMZEG00005006453 #15	tmem150b (ENSMZEG00005006469)	adsl (ENSMZEG00005006493) #16	adsl (ENSMZEG00005006522) #16	adsl (ENSMZEG00005006556) #16	adsl (ENSMZEG00005006589) #16	ENSMZEG00005006623	adsl (ENSMZEG00005006647) #16	ENSMZEG00005006816 #17	atf4b (ENSMZEG00005006842) #18	ENSMZEG00005006854	ENSMZEG00005006869 #19	mief1 (ENSMZEG00005006902) #20	ENSMZEG00005006924 #21	mpst (ENSMZEG00005006933)	ENSMZEG00005006940 #22	il2rb (ENSMZEG00005006969) #23	ENSMZEG00005007014	chst12a (ENSMZEG00005007022)	CARD11 (ENSMZEG00005007053)	ap5z1 (ENSMZEG00005007127)	mmd2a (ENSMZEG00005007185)	wipi2 (ENSMZEG00005007214)	ENSMZEG00005007272	ENSMZEG00005007290	smurf1 (ENSMZEG00005007314)	RNF216 (ENSMZEG00005007337)	FSCN1 (ENSMZEG00005007362)	ENSMZEG00005007397	TNRC18 (ENSMZEG00005007439)	slc29a4a (ENSMZEG00005007481)
Eastern happy	MODERN SPECIES	16	ENSACLG00000011630	adsl (ENSACLG00000011596) #16	ENSACLG00000011592	adsl (ENSACLG00000011567) #16	ENSACLG00000011560	ENSACLG00000011548	ENSACLG00000011545 #17	atf4b (ENSACLG00000011542) #18	ENSACLG00000011537	ENSACLG00000011532 #19	mief1 (ENSACLG00000011513) #20	ENSACLG00000011509	ENSACLG00000011507	ENSACLG00000011503 #21	mpst (ENSACLG00000011501)	ENSACLG00000011495 #22	ENSACLG00000011466 #23	ENSACLG00000011462	chst12a (ENSACLG00000011184)	CARD11 (ENSACLG00000011082)	ap5z1 (ENSACLG00000011021)	MMD2 (ENSACLG00000010994)	wipi2 (ENSACLG00000010922)	smurf1 (ENSACLG00000010783)	RNF216 (ENSACLG00000010729)	FSCN1 (ENSACLG00000010718)	ENSACLG00000010698	ENSACLG00000010670	ENSACLG00000010643	slc29a4a (ENSACLG00000010394)	atp5mf (ENSACLG00000010386)
P. nyererei	MODERN SPECIES	427									ENSPNYG00000017987 #17	atf4b (ENSPNYG00000017995) #18	ENSPNYG00000017999	ENSPNYG00000018005 #19	mief1 (ENSPNYG00000018019) #20	ENSPNYG00000018038 #21	mpst (ENSPNYG00000018047)	ube2ib (ENSPNYG00000018054) #22	il2rb (ENSPNYG00000018082) #23	ENSPNYG00000018136	chst12a (ENSPNYG00000018150)	CARD11 (ENSPNYG00000018165)	ap5z1 (ENSPNYG00000018222)	mmd2a (ENSPNYG00000018238)	wipi2 (ENSPNYG00000018273)	ENSPNYG00000018318	smurf1 (ENSPNYG00000018376)	ENSPNYG00000018397	FSCN1 (ENSPNYG00000018408)	ENSPNYG00000018427	ENSPNYG00000018455	slc29a4a (ENSPNYG00000018510)	atp5mf (ENSPNYG00000018539)
Nile tilapia	MODERN SPECIES	16	adsl (ENSONIG00000008560) #16	ENSONIG00000038907	adsl (ENSONIG00000036192) #16	adsl (ENSONIG00000008556) #16	ENSONIG00000027910	ENSONIG00000008553	ENSONIG00000029635	atf4b (ENSONIG00000034760) #18	ENSONIG00000008550	ENSONIG00000008542 #19	mief1 (ENSONIG00000008541) #20	ENSONIG00000042044	ENSONIG00000031382 #21	ENSONIG00000043232	mpst (ENSONIG00000008540)	ENSONIG00000030166 #22	ENSONIG00000008536 #23	ENSONIG00000008535	chst12a (ENSONIG00000028097)	CARD11 (ENSONIG00000008528)	ap5z1 (ENSONIG00000008527)	MMD2 (ENSONIG00000040581)	wipi2 (ENSONIG00000008520)	ENSONIG00000040231	smurf1 (ENSONIG00000008515)	FSCN1 (ENSONIG00000008509)	ENSONIG00000008502	slc29a4a (ENSONIG00000008500)	atp5mf (ENSONIG00000008498)	cpsf4 (ENSONIG00000039547)	shmt1 (ENSONIG00000008491)
Midas cichlid	MODERN SPECIES	413									atf4b (ENSACIG00000008233) #18	ENSACIG00000008245	ENSACIG00000008260 #19	mief1 (ENSACIG00000008280) #20	ENSACIG00000008291	ENSACIG00000008294	mpst (ENSACIG00000008307)	ENSACIG00000008325 #22	ENSACIG00000008341	ENSACIG00000008365	chst12a (ENSACIG00000008378)	CARD11 (ENSACIG00000008397)	ap5z1 (ENSACIG00000008455)	mmd2a (ENSACIG00000008496)	wipi2 (ENSACIG00000008526)	ENSACIG00000008555	smurf1 (ENSACIG00000008901)	RNF216 (ENSACIG00000008944)	FSCN1 (ENSACIG00000008970)	ENSACIG00000008980	TNRC18 (ENSACIG00000008998)	slc29a4a (ENSACIG00000009092)	atp5mf (ENSACIG00000009170)
Atherinomorphae	ANCESTRAL SPECIES	6	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Oryzias	ANCESTRAL SPECIES		ENSGT00950000182951.A.a.b.b #7	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b.sb	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.a.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Oryzias_b	ANCESTRAL SPECIES	30	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a.f	ENSGT00510000046773.a.b.c.a.e	ENSGT00550000075088.a.b #22	ENSGT00940000177422	ENSGT00940000160396	ENSGT00940000156614.b.sb	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.a.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Indian medaka	MODERN SPECIES	9	ENSOMEG00000022407 #14	ENSOMEG00000022463 #15	tmem150b (ENSOMEG00000022485)	tmem150b (ENSOMEG00000000594)	adsl (ENSOMEG00000022529) #16	ENSOMEG00000022547 #17	atf4b (ENSOMEG00000022555) #18	ENSOMEG00000004437	ENSOMEG00000004477 #19	ENSOMEG00000004495	mief1 (ENSOMEG00000004506) #20	ENSOMEG00000004519 #21	mpst (ENSOMEG00000004526)	ENSOMEG00000004607	mpst (ENSOMEG00000004645)	ENSOMEG00000004671 #22	ENSOMEG00000004707	C1QTNF6 (ENSOMEG00000004726)	chst12a (ENSOMEG00000004762)	CARD11 (ENSOMEG00000004885)	ap5z1 (ENSOMEG00000001000)	mmd2a (ENSOMEG00000004957)	wipi2 (ENSOMEG00000004986)	smurf1 (ENSOMEG00000005021)	RNF216 (ENSOMEG00000005042)	FSCN1 (ENSOMEG00000005059)	ACTB (ENSOMEG00000000111)	TNRC18 (ENSOMEG00000005103)	slc29a4a (ENSOMEG00000005135)	atp5mf (ENSOMEG00000005152)	cpsf4 (ENSOMEG00000005176)
Javanese ricefish	MODERN SPECIES	22	ENSOJAG00000016361 #15	tmem150b (ENSOJAG00000016353)	ENSOJAG00000016159 #17	atf4b (ENSOJAG00000016140) #18	mief1 (ENSOJAG00000016119) #20	ENSOJAG00000016098 #19	mief1 (ENSOJAG00000016041) #20	ENSOJAG00000015954 #19	ENSOJAG00000015937	ENSOJAG00000015915	mief1 (ENSOJAG00000015895) #20	ENSOJAG00000015889	ENSOJAG00000015880	mpst (ENSOJAG00000015874)	mpst (ENSOJAG00000015869)	ENSOJAG00000015843 #22	ENSOJAG00000015832	C1QTNF6 (ENSOJAG00000015826)	chst12a (ENSOJAG00000015821)	CARD11 (ENSOJAG00000015715)	ap5z1 (ENSOJAG00000015666)	mmd2a (ENSOJAG00000015657)	wipi2 (ENSOJAG00000015249)	smurf1 (ENSOJAG00000013851)	RNF216 (ENSOJAG00000013681)	FSCN1 (ENSOJAG00000013632)	ACTB (ENSOJAG00000013436)	ENSOJAG00000013405	slc29a4a (ENSOJAG00000013395)	atp5mf (ENSOJAG00000013368)	cpsf4 (ENSOJAG00000013354)
Oryzias_a	ANCESTRAL SPECIES	20	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b.sb	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.a.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Japanese Medaka HdrR	MODERN SPECIES	22	ENSORLG00000013372 #10	pvalb6 (ENSORLG00000013396) #12	ENSORLG00000013406 #14	ENSORLG00000013411 #15	tmem150b (ENSORLG00000025419)	adsl (ENSORLG00000027286) #16	ENSORLG00000013414 #17	atf4b (ENSORLG00000013424) #18	ENSORLG00000013428	ENSORLG00000013465 #19	mief1 (ENSORLG00000013478) #20	ENSORLG00000022248 #21	ENSORLG00000027830	mpst (ENSORLG00000029872)	mpst (ENSORLG00000013490)	ENSORLG00000013514 #22	il2rb (ENSORLG00000013522) #23	C1QTNF6 (ENSORLG00000010706)	ENSORLG00000029259	chst12a (ENSORLG00000013533)	CARD11 (ENSORLG00000013537)	ap5z1 (ENSORLG00000013568)	mmd2a (ENSORLG00000027433)	wipi2 (ENSORLG00000013601)	smurf1 (ENSORLG00000013636)	RNF216 (ENSORLG00000013652)	FSCN1 (ENSORLG00000013664)	actb2 (ENSORLG00000013676)	TNRC18 (ENSORLG00000013686)	slc29a4a (ENSORLG00000013699)	ENSORLG00000027893
Chinese medaka	MODERN SPECIES	907	ENSOSIG00000008004	ENSOSIG00000008008 #7	ENSOSIG00000008014 #10	ENSOSIG00000008015 #13	pvalb6 (ENSOSIG00000008018) #12	ENSOSIG00000008019 #14	ENSOSIG00000008022 #15	tmem150b (ENSOSIG00000008024)	ENSOSIG00000008222 #17	atf4b (ENSOSIG00000008223) #18	ENSOSIG00000008224	ENSOSIG00000008225 #19	mief1 (ENSOSIG00000008226) #20	ENSOSIG00000008227	ENSOSIG00000008228	ube2ib (ENSOSIG00000008229) #22	ENSOSIG00000008230	C1QTNF6 (ENSOSIG00000008231)	chst12a (ENSOSIG00000008232)	CARD11 (ENSOSIG00000008236)	ENSOSIG00000008285	wipi2 (ENSOSIG00000008296)	smurf1 (ENSOSIG00000008452)	ENSOSIG00000008771	FSCN1 (ENSOSIG00000009275)	ENSOSIG00000009285	ENSOSIG00000009378	slc29a4a (ENSOSIG00000009387)	atp5mf (ENSOSIG00000009393)	cpsf4 (ENSOSIG00000009394)	shmt1 (ENSOSIG00000009422)
Cyprinodontiformes	ANCESTRAL SPECIES	3	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Aplocheiloidei	ANCESTRAL SPECIES	30	ENSGT00940000166738	ENSGT00950000182951.A.a.b.b #7	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00940000177422	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Mangrove rivulus	MODERN SPECIES	37	ENSKMAG00000016676 #10	ENSKMAG00000016633 #13	pvalb6 (ENSKMAG00000016614) #12	ENSKMAG00000016589 #14	ENSKMAG00000016560 #15	tmem150b (ENSKMAG00000016528)	adsl (ENSKMAG00000016489) #16	ENSKMAG00000016471 #17	atf4b (ENSKMAG00000016459) #18	ENSKMAG00000016438 #19	mief1 (ENSKMAG00000016398) #20	ENSKMAG00000016377 #21	mpst (ENSKMAG00000016365)	mpst (ENSKMAG00000016347)	mpst (ENSKMAG00000016335)	ENSKMAG00000016317 #22	ENSKMAG00000016305	C1QTNF6 (ENSKMAG00000016291)	chst12a (ENSKMAG00000016278)	CARD11 (ENSKMAG00000016241)	ap5z1 (ENSKMAG00000016203)	mmd2a (ENSKMAG00000016187)	wipi2 (ENSKMAG00000016149)	smurf1 (ENSKMAG00000016086)	RNF216 (ENSKMAG00000016053)	FSCN1 (ENSKMAG00000016031)	ENSKMAG00000016009	TNRC18 (ENSKMAG00000015814)	slc29a4a (ENSKMAG00000015698)	atp5mf (ENSKMAG00000015662)	cpsf4 (ENSKMAG00000015642)
Turquoise killifish	MODERN SPECIES	1612	CR790377.1 (ENSNFUG00015002733) #10	ENSNFUG00015002743 #13	pvalb6 (ENSNFUG00015002775) #12	ENSNFUG00015002859 #14	tmem150b (ENSNFUG00015002875)	adsl (ENSNFUG00015002891) #16	ENSNFUG00015002907	CR812472.2 (ENSNFUG00015002913) #17	ATF4B2 (ENSNFUG00015002924) #18	ZGC (ENSNFUG00015002927)	ENSNFUG00015002937 #19	SMCR7A (ENSNFUG00015002956) #20	BX470254.1 (ENSNFUG00015002962) #21	mpst (ENSNFUG00015002965)	Nfu_g_1_019808 (ENSNFUG00015002970)	UBE2I (ENSNFUG00015002972) #22	ENSNFUG00015002975	ENSNFUG00015002980	C1QTNF6A (ENSNFUG00015002982)	CHST12A (ENSNFUG00015002983)	CARD11 (ENSNFUG00015002989)	ap5z1 (ENSNFUG00015003007)	ENSNFUG00015003024	MMD2 (ENSNFUG00015003032)	WIPI2 (ENSNFUG00015003056)	SMURF1 (ENSNFUG00015003090)	RNF216 (ENSNFUG00015003175)	FSCN1A (ENSNFUG00015003183)	ENSNFUG00015003210	TNRC18 (ENSNFUG00015003248)	slc29a4a (ENSNFUG00015003258)
Cyprinodontoidei	ANCESTRAL SPECIES	22	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a.j	ENSGT00510000046773.a.b.c.a.i.b	ENSGT00510000046773.a.b.c.a.i.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
NAME_4	ANCESTRAL SPECIES	36	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a.j	ENSGT00510000046773.a.b.c.a.i.b	ENSGT00510000046773.a.b.c.a.i.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Mummichog	MODERN SPECIES	395															mpst (ENSFHEG00000010388)	ENSFHEG00000010415 #22	ENSFHEG00000010426 #23	C1QTNF6 (ENSFHEG00000010432)	chst12a (ENSFHEG00000010465)	CARD11 (ENSFHEG00000010483)	ap5z1 (ENSFHEG00000010508)	mmd2a (ENSFHEG00000010533)	wipi2 (ENSFHEG00000010574)	smurf1 (ENSFHEG00000010695)	RNF216 (ENSFHEG00000010758)	FSCN1 (ENSFHEG00000010780)	ENSFHEG00000010793	ENSFHEG00000010803	slc29a4a (ENSFHEG00000010836)	atp5mf (ENSFHEG00000010853)	cpsf4 (ENSFHEG00000010880)
Sheepshead minnow	MODERN SPECIES	287	adsl (ENSCVAG00000003336) #16	ENSCVAG00000003340 #17	atf4b (ENSCVAG00000003344) #18	ENSCVAG00000003347	ENSCVAG00000003354 #19	mief1 (ENSCVAG00000003368) #20	ENSCVAG00000003376 #21	ENSCVAG00000003385	mpst (ENSCVAG00000003388)	ENSCVAG00000003396	ENSCVAG00000003409	ENSCVAG00000003417	ENSCVAG00000003420	ENSCVAG00000003433	mpst (ENSCVAG00000003437)	ENSCVAG00000003452 #22	ENSCVAG00000003463 #23	C1QTNF6 (ENSCVAG00000003468)	chst12a (ENSCVAG00000003482)	ENSCVAG00000003545	ap5z1 (ENSCVAG00000000108)	mmd2a (ENSCVAG00000003594)	wipi2 (ENSCVAG00000003619)	smurf1 (ENSCVAG00000003665)	RNF216 (ENSCVAG00000003675)	FSCN1 (ENSCVAG00000003683)	ENSCVAG00000003692	ENSCVAG00000003701	TNRC18 (ENSCVAG00000003741)
Poeciliinae	ANCESTRAL SPECIES	1	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a.j	ENSGT00510000046773.a.b.c.a.i.b	ENSGT00510000046773.a.b.c.a.i.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Poecilia	ANCESTRAL SPECIES	18	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a.j	ENSGT00510000046773.a.b.c.a.i.b	ENSGT00510000046773.a.b.c.a.i.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
NAME_6	ANCESTRAL SPECIES	63	ENSGT00940000166738	ENSGT00950000182951.A.a.b.b #7	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a.j	ENSGT00510000046773.a.b.c.a.i.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	4046																ENSPLAG00000004465 #22
Sailfin molly	MODERN SPECIES	3670															ENSPLAG00000009491	ENSPLAG00000009526 #22
Amazon molly	MODERN SPECIES	432	ENSPFOG00000006241	ENSPFOG00000006061 #7	ENSPFOG00000006005 #10	ENSPFOG00000005924 #13	pvalb6 (ENSPFOG00000005873) #12	ENSPFOG00000005808 #14	adsl (ENSPFOG00000005498) #16	ENSPFOG00000005467 #17	atf4b (ENSPFOG00000005452) #18	ENSPFOG00000005447	ENSPFOG00000005248 #19	mief1 (ENSPFOG00000005190) #20	ENSPFOG00000005178 #21	mpst (ENSPFOG00000005123)	mpst (ENSPFOG00000005120)	ENSPFOG00000005112 #22	ENSPFOG00000005082 #23	ENSPFOG00000005049	chst12a (ENSPFOG00000004999)	CARD11 (ENSPFOG00000004641)	ap5z1 (ENSPFOG00000004201)	MMD2 (ENSPFOG00000004107)
Guppy	MODERN SPECIES	460	ENSPREG00000018912	ENSPREG00000018904	ENSPREG00000018893	GRIN2A (ENSPREG00000018839)	ENSPREG00000018806 #15	adsl (ENSPREG00000018777) #16	ENSPREG00000018760 #17	atf4b (ENSPREG00000018746) #18	ENSPREG00000018711 #19	mief1 (ENSPREG00000018688) #20	ENSPREG00000018679	ENSPREG00000018669 #21	mpst (ENSPREG00000018653)	mpst (ENSPREG00000018638)	mpst (ENSPREG00000018626)	ENSPREG00000018610 #22	ENSPREG00000018591 #23	ENSPREG00000018579	chst12a (ENSPREG00000018573)	ENSPREG00000018562	ENSPREG00000018546	ap5z1 (ENSPREG00000018514)	MMD2 (ENSPREG00000018489)	wipi2 (ENSPREG00000018468)	smurf1 (ENSPREG00000018426)	ENSPREG00000018368	FSCN1 (ENSPREG00000018339)	actb (ENSPREG00000018292)	TNRC18 (ENSPREG00000018258)	slc29a4a (ENSPREG00000018228)	atp5mf (ENSPREG00000018180)
Platyfish	MODERN SPECIES	7	ENSXMAG00000023862	ENSXMAG00000001247 #7	ENSXMAG00000001239 #10	ENSXMAG00000026807 #13	pvalb6 (ENSXMAG00000022337) #12	ENSXMAG00000001207 #14	ENSXMAG00000001200 #15	adsl (ENSXMAG00000002657) #16	ENSXMAG00000022387 #17	atf4b (ENSXMAG00000002653) #18	ENSXMAG00000023763	ENSXMAG00000029235 #19	mief1 (ENSXMAG00000001151) #20	ENSXMAG00000026576 #21	mpst (ENSXMAG00000001146)	ENSXMAG00000001134 #22	il2rb (ENSXMAG00000001127) #23	ENSXMAG00000001125	chst12a (ENSXMAG00000026379)	CARD11 (ENSXMAG00000001085)	ap5z1 (ENSXMAG00000001068)	MMD2 (ENSXMAG00000028136)	wipi2 (ENSXMAG00000001048)	smurf1 (ENSXMAG00000001013)	ENSXMAG00000024191	RNF216 (ENSXMAG00000001006)	FSCN1 (ENSXMAG00000000999)	ENSXMAG00000000982	TNRC18 (ENSXMAG00000000969)	slc29a4a (ENSXMAG00000025766)	cpsf4 (ENSXMAG00000024670)
Percomorphaceae_C	ANCESTRAL SPECIES		ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.d	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Eupercaria	ANCESTRAL SPECIES	3	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00970000196672	ENSGT00990000209944	ENSGT00510000046773.a.b.d	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000160705.C.b	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557
Tetraodontidae	ANCESTRAL SPECIES	41	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000160179	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.d	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.a.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520	ENSGT00390000002762.a.b	ENSGT00390000018509.a	ENSGT00390000014300
Fugu	MODERN SPECIES	17	ENSTRUG00000000762 #10	ENSTRUG00000027569 #13	pvalb6 (ENSTRUG00000022018) #12	ENSTRUG00000000895 #14	ENSTRUG00000000915 #15	adsl (ENSTRUG00000001024) #16	ENSTRUG00000026084	ENSTRUG00000001234 #17	atf4b (ENSTRUG00000021873) #18	ENSTRUG00000030038	napsa (ENSTRUG00000001310)	mief1 (ENSTRUG00000021806) #20	ENSTRUG00000023803 #21	TST (ENSTRUG00000001660)	mpst (ENSTRUG00000001668)	ENSTRUG00000025136 #22	ENSTRUG00000021244	ENSTRUG00000031320	chst12a (ENSTRUG00000025406)	ENSTRUG00000002024	ap5z1 (ENSTRUG00000003903)	mmd2a (ENSTRUG00000004208)	wipi2 (ENSTRUG00000004292)	smurf1 (ENSTRUG00000004668)	FSCN1 (ENSTRUG00000005218)	ACTB (ENSTRUG00000005447)	TNRC18 (ENSTRUG00000005638)	slc29a4a (ENSTRUG00000005833)	atp5mf (ENSTRUG00000003441)	cpsf4 (ENSTRUG00000030405)	shmt1 (ENSTRUG00000003948)
Tetraodon	MODERN SPECIES	26	ENSTNIG00000011502 #7	ENSTNIG00000011501 #10	ENSTNIG00000011500 #13	pvalb6 (ENSTNIG00000011499) #12	ENSTNIG00000001803 #14	PDGFB (ENSTNIG00000011498) #15	adsl (ENSTNIG00000011497) #16	ENSTNIG00000011496 #17	atf4b (ENSTNIG00000011495) #18	napsa (ENSTNIG00000011494)	mief1 (ENSTNIG00000011493) #20	ENSTNIG00000011492	ENSTNIG00000006419	TST (ENSTNIG00000002305)	mpst (ENSTNIG00000006420)	ube2ib (ENSTNIG00000006421) #22	ENSTNIG00000001793 #23	ENSTNIG00000006422	chst12a (ENSTNIG00000006423)	ENSTNIG00000006424	ENSTNIG00000006425	wipi2 (ENSTNIG00000004327)	SMURF1 (ENSTNIG00000014247)	FSCN1 (ENSTNIG00000014246)	ENSTNIG00000007002	ENSTNIG00000007001	ENSTNIG00000003695	slc29a4a (ENSTNIG00000003694)	atp5mf (ENSTNIG00000006264)	atp5mf (ENSTNIG00000003693)	cpsf4 (ENSTNIG00000006265)
Eupecaria_A	ANCESTRAL SPECIES	5	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT01040000241311	ENSGT00940000167870	ENSGT00940000162556.D.a.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00970000196672	ENSGT00990000209944	ENSGT00510000046773.a.b.d	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Ballan wrasse	MODERN SPECIES	394	ENSLBEG00000011205 #7	ENSLBEG00000011177 #10	ENSLBEG00000011113 #13	pvalb6 (ENSLBEG00000011072) #12	ENSLBEG00000011033 #14	ENSLBEG00000011001 #15	adsl (ENSLBEG00000010944) #16	ENSLBEG00000010913	atf4b (ENSLBEG00000010900) #18	ENSLBEG00000010813	ENSLBEG00000010715 #19	mief1 (ENSLBEG00000010674) #20	ENSLBEG00000010639 #21	TST (ENSLBEG00000010607)	mpst (ENSLBEG00000010592)	ube2ib (ENSLBEG00000010563) #22	ENSLBEG00000010526	ENSLBEG00000010483	chst12a (ENSLBEG00000010386)	CARD11 (ENSLBEG00000010287)	ap5z1 (ENSLBEG00000010211)	mmd2a (ENSLBEG00000010108)	ENSLBEG00000010076	wipi2 (ENSLBEG00000010024)	smurf1 (ENSLBEG00000009908)	ENSLBEG00000009850	FSCN1 (ENSLBEG00000009785)	ENSLBEG00000009731	ENSLBEG00000009689
Eupecaria_B	ANCESTRAL SPECIES		ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT01040000241311	ENSGT00940000167870	ENSGT00940000162556.D.a.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00970000196672	ENSGT00990000209944	ENSGT00510000046773.a.b.d	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Eupecaria_C	ANCESTRAL SPECIES	17	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00970000196672	ENSGT00990000209944	ENSGT00510000046773.a.b.d	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Gilthead seabream	MODERN SPECIES	15	ENSSAUG00010016503 #10	ENSSAUG00010016502 #13	pvalb6 (ENSSAUG00010016499) #12	ENSSAUG00010016497 #14	ENSSAUG00010016496 #15	tmem150b (ENSSAUG00010016495)	adsl (ENSSAUG00010016361) #16	ENSSAUG00010016355	atf4b (ENSSAUG00010016353) #18	ENSSAUG00010016351	ENSSAUG00010016344 #19	mief1 (ENSSAUG00010016343) #20	ENSSAUG00010016342 #21	ENSSAUG00010016340	mpst (ENSSAUG00010016339)	ENSSAUG00010016334 #22	ENSSAUG00010016333 #23	ENSSAUG00010016332	chst12a (ENSSAUG00010016330)	ENSSAUG00010016310	ap5z1 (ENSSAUG00010016205)	mmd2a (ENSSAUG00010016193)	wipi2 (ENSSAUG00010017739)	ENSSAUG00010017732	smurf1 (ENSSAUG00010015946)	RNF216 (ENSSAUG00010015458)	FSCN1 (ENSSAUG00010015448)	ENSSAUG00010015428	TNRC18 (ENSSAUG00010015422)	slc29a4a (ENSSAUG00010015410)	atp5mf (ENSSAUG00010015404)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	35	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00970000196672	ENSGT00990000209944	ENSGT00510000046773.a.b.d	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
European seabass	MODERN SPECIES	21	ENSDLAG00005033261 #10	pvalb6 (ENSDLAG00005004622) #12	ENSDLAG00005004644 #14	ENSDLAG00005004694 #15	tmem150b (ENSDLAG00005004733)	adsl (ENSDLAG00005031872) #16	ENSDLAG00005032142 #17	atf4b (ENSDLAG00005026933) #18	ENSDLAG00005004784	ENSDLAG00005004808 #19	mief1 (ENSDLAG00005004893) #20	ENSDLAG00005029048	ENSDLAG00005028464	ENSDLAG00005004924	mpst (ENSDLAG00005004928)	ENSDLAG00005004936 #22	il2rb (ENSDLAG00005031516) #23	ENSDLAG00005005000	ENSDLAG00005005025	ap5z1 (ENSDLAG00005005205)	MMD2 (ENSDLAG00005033203)	wipi2 (ENSDLAG00005005248)	ENSDLAG00005005438	smurf1 (ENSDLAG00005005887)	RNF216 (ENSDLAG00005006912)	FSCN1 (ENSDLAG00005007046)	ENSDLAG00005028561	TNRC18 (ENSDLAG00005007088)	slc29a4a (ENSDLAG00005007426)	ENSDLAG00005007485	cpsf4 (ENSDLAG00005030914)
Large yellow croaker	MODERN SPECIES	483	ENSLCRG00005007443 #13	pvalb6 (ENSLCRG00005007448) #12	ENSLCRG00005007450 #14	ENSLCRG00005007455 #15	tmem150b (ENSLCRG00005007457)	adsl (ENSLCRG00005007463) #16	ENSLCRG00005008447	atf4b (ENSLCRG00005008448) #18	ENSLCRG00005008450	ENSLCRG00005008453 #19	mief1 (ENSLCRG00005008458) #20	ENSLCRG00005008459	ENSLCRG00005008461	TST (ENSLCRG00005008462)	mpst (ENSLCRG00005008463)	ENSLCRG00005008466 #22	il2rb (ENSLCRG00005008470) #23	C1QTNF6 (ENSLCRG00005008472)	chst12a (ENSLCRG00005008473)	CARD11 (ENSLCRG00005008474)	ap5z1 (ENSLCRG00005008483)	mmd2a (ENSLCRG00005008949)	wipi2 (ENSLCRG00005008952)	ENSLCRG00005008973	smurf1 (ENSLCRG00005008991)	RNF216 (ENSLCRG00005009608)	FSCN1 (ENSLCRG00005009652)	ENSLCRG00005009660	TNRC18 (ENSLCRG00005009693)	slc29a4a (ENSLCRG00005009699)	atp5mf (ENSLCRG00005009727)
Perciformes	ANCESTRAL SPECIES	1	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00990000209944	ENSGT00510000046773.a.b.d	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000160705.C.b	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099.d	ENSGT00950000182898.a.b	ENSGT00940000165557
Cottioidei	ANCESTRAL SPECIES	1	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00940000167870	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00990000209944	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099.d	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Stickleback	MODERN SPECIES	10	pvalb6 (ENSGACG00000008329) #12	ENSGACG00000008326 #14	ENSGACG00000008313 #15	tmem150b (ENSGACG00000008299)	adsl (ENSGACG00000008181) #16	ENSGACG00000008177 #17	ENSGACG00000008175	ENSGACG00000008090 #19	mief1 (ENSGACG00000008071) #20	ENSGACG00000008069 #21	ENSGACG00000008064	ENSGACG00000008059	ENSGACG00000008055	ENSGACG00000008053 #21	mpst (ENSGACG00000008039)	ENSGACG00000008012 #22	il2rb (ENSGACG00000008005) #23	ENSGACG00000008001	chst12a (ENSGACG00000007992)	CARD11 (ENSGACG00000007978)	ap5z1 (ENSGACG00000007962)	mmd2a (ENSGACG00000007947)	wipi2 (ENSGACG00000007931)	ENSGACG00000007926	smurf1 (ENSGACG00000007912)	ENSGACG00000007911	ENSGACG00000007906	FSCN1 (ENSGACG00000007892)	ENSGACG00000007836	ENSGACG00000007822	ENSGACG00000007811
Lumpfish	MODERN SPECIES	23	ENSCLMG00005012627 #10	pvalb6 (ENSCLMG00005012626) #12	ENSCLMG00005012625 #14	ENSCLMG00005012624 #15	tmem150b (ENSCLMG00005012621)	adsl (ENSCLMG00005012383) #16	ENSCLMG00005012374	ENSCLMG00005012373	ENSCLMG00005012372	ENSCLMG00005012360 #19	ENSCLMG00005012359 #20	ENSCLMG00005012357	ENSCLMG00005012356	ENSCLMG00005012355	mpst (ENSCLMG00005012354)	ube2ib (ENSCLMG00005012352) #22	il2rb (ENSCLMG00005012351) #23	ENSCLMG00005012350	chst12a (ENSCLMG00005012349)	ENSCLMG00005012297	ap5z1 (ENSCLMG00005012231)	MMD2 (ENSCLMG00005012147)	wipi2 (ENSCLMG00005012140)	smurf1 (ENSCLMG00005010392)	RNF216 (ENSCLMG00005010369)	FSCN1 (ENSCLMG00005010366)	ENSCLMG00005010364	ENSCLMG00005010361	slc29a4a (ENSCLMG00005010359)	atp5mf (ENSCLMG00005010357)	cpsf4 (ENSCLMG00005010356)
Perciformes_a	ANCESTRAL SPECIES	1	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00970000196672	ENSGT00940000178559	ENSGT00990000209944	ENSGT00950000183045.A.b	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000160705.C.b	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099.d	ENSGT00950000182898.a.b	ENSGT00940000165557
Channel bull blenny	MODERN SPECIES	22	ENSCGOG00000001540 #10	pvalb6 (ENSCGOG00000001542) #12	ENSCGOG00000001543 #14	ENSCGOG00000001545 #15	tmem150b (ENSCGOG00000001547)	adsl (ENSCGOG00000001555) #16	ENSCGOG00000001727 #17	ENSCGOG00000001736	ENSCGOG00000001738	ENSCGOG00000001750 #19	mief1 (ENSCGOG00000001788) #20	ENSCGOG00000001802	ENSCGOG00000001803	TST (ENSCGOG00000001809)	mpst (ENSCGOG00000001816)	ube2ib (ENSCGOG00000001819) #22	il2rb (ENSCGOG00000001900) #23	ENSCGOG00000001903	chst12a (ENSCGOG00000001904)	CARD11 (ENSCGOG00000001917)	ap5z1 (ENSCGOG00000002086)	MMD2 (ENSCGOG00000002155)	wipi2 (ENSCGOG00000002192)	ENSCGOG00000002827	smurf1 (ENSCGOG00000002905)	ENSCGOG00000003967	FSCN1 (ENSCGOG00000004005)	actb2 (ENSCGOG00000004016)	ENSCGOG00000004726	slc29a4a (ENSCGOG00000004740)	cpsf4 (ENSCGOG00000004795)
Pike perch	MODERN SPECIES	38	pvalb6 (ENSSLUG00000008231) #12	ENSSLUG00000008214 #14	ENSSLUG00000008203 #15	tmem150b (ENSSLUG00000008199)	adsl (ENSSLUG00000008028) #16	ENSSLUG00000007992	ENSSLUG00000007986 #17	atf4b (ENSSLUG00000007978) #18	ENSSLUG00000007972	ENSSLUG00000007961 #19	mief1 (ENSSLUG00000007958) #20	ENSSLUG00000007951	ENSSLUG00000007945	ENSSLUG00000007941	mpst (ENSSLUG00000007940)	ube2ib (ENSSLUG00000007925) #22	il2rb (ENSSLUG00000007917) #23	ENSSLUG00000007912	chst12a (ENSSLUG00000007909)	CARD11 (ENSSLUG00000007480)	ap5z1 (ENSSLUG00000007091)	MMD2 (ENSSLUG00000007019)	wipi2 (ENSSLUG00000006792)	ENSSLUG00000006719	smurf1 (ENSSLUG00000004895)	RNF216 (ENSSLUG00000004798)	FSCN1 (ENSSLUG00000004784)	ENSSLUG00000004774	ENSSLUG00000004760	slc29a4a (ENSSLUG00000004736)	atp5mf (ENSSLUG00000004711)
Percomorphaceae_D	ANCESTRAL SPECIES	1	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.d	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Anabantaria	ANCESTRAL SPECIES	6	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Zig-zag eel	MODERN SPECIES	22	ENSMAMG00000005460 #13	pvalb6 (ENSMAMG00000026163) #12	ENSMAMG00000005485 #14	ENSMAMG00000005518 #15	tmem150b (ENSMAMG00000005525)	adsl (ENSMAMG00000005541) #16	ENSMAMG00000005580	ENSMAMG00000028008 #17	atf4b (ENSMAMG00000005592) #18	ENSMAMG00000005595	ENSMAMG00000005608 #19	mief1 (ENSMAMG00000005636) #20	ENSMAMG00000025452	ENSMAMG00000025261	mpst (ENSMAMG00000026004)	ENSMAMG00000005676 #22	il2rb (ENSMAMG00000005698) #23	ENSMAMG00000005704	ENSMAMG00000025120	ENSMAMG00000005729	ap5z1 (ENSMAMG00000005791)	MMD2 (ENSMAMG00000005812)	wipi2 (ENSMAMG00000005834)	ENSMAMG00000005888	smurf1 (ENSMAMG00000005989)	RNF216 (ENSMAMG00000006051)	FSCN1 (ENSMAMG00000006071)	ENSMAMG00000006109	TNRC18 (ENSMAMG00000006142)	slc29a4a (ENSMAMG00000006177)	ENSMAMG00000006221
Anabantoidei	ANCESTRAL SPECIES	7	ENSGT00950000182951.A.a.b.b #7	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Siamese fighting fish	MODERN SPECIES	19	ENSBSLG00000002950	ENSBSLG00000002930 #7	ENSBSLG00000002890 #10	pvalb6 (ENSBSLG00000002881) #12	ENSBSLG00000002870 #14	ENSBSLG00000002844 #15	tmem150b (ENSBSLG00000002746)	adsl (ENSBSLG00000002496) #16	ENSBSLG00000002447 #17	atf4b (ENSBSLG00000002400) #18	ENSBSLG00000002308	ENSBSLG00000002254 #19	mief1 (ENSBSLG00000002229) #20	ENSBSLG00000002220	mpst (ENSBSLG00000002209)	ENSBSLG00000002186 #22	il2rb (ENSBSLG00000002162) #23	ENSBSLG00000002143	chst12a (ENSBSLG00000002130)	CARD11 (ENSBSLG00000002054)	ap5z1 (ENSBSLG00000002014)	MMD2 (ENSBSLG00000002000)	wipi2 (ENSBSLG00000001996)	smurf1 (ENSBSLG00000001842)	ENSBSLG00000001775	ENSBSLG00000001756	ENSBSLG00000001690	TNRC18 (ENSBSLG00000021039)	slc29a4a (ENSBSLG00000020485)	atp5mf (ENSBSLG00000020484)	cpsf4 (ENSBSLG00000020471)
Climbing perch	MODERN SPECIES	21	ENSATEG00000005959 #10	pvalb6 (ENSATEG00000005983) #12	ENSATEG00000005999 #14	ENSATEG00000006013 #15	tmem150b (ENSATEG00000006059)	adsl (ENSATEG00000006107) #16	ENSATEG00000026437 #17	atf4b (ENSATEG00000006189) #18	ENSATEG00000006194	ENSATEG00000006200 #19	mief1 (ENSATEG00000006239) #20	ENSATEG00000029794	ENSATEG00000030156	ENSATEG00000025808	mpst (ENSATEG00000028103)	ENSATEG00000006302 #22	il2rb (ENSATEG00000006333) #23	ENSATEG00000006340	ENSATEG00000006352	ENSATEG00000006382	ap5z1 (ENSATEG00000006503)	MMD2 (ENSATEG00000006514)	wipi2 (ENSATEG00000006552)	ENSATEG00000006606	smurf1 (ENSATEG00000006799)	ENSATEG00000006873	ENSATEG00000006883	ENSATEG00000006911	ENSATEG00000006938	slc29a4a (ENSATEG00000006954)	ENSATEG00000028258
Carangaria	ANCESTRAL SPECIES	4	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.d	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000160705.C.b	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557
Carangaria_A	ANCESTRAL SPECIES	12	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.d	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520
Seriola	ANCESTRAL SPECIES	23	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.d	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000154598	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.b.e.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557	ENSGT00940000155520	ENSGT00390000002762.a.b
Greater amberjack	MODERN SPECIES	90	pvalb6 (ENSSDUG00000017878) #12	ENSSDUG00000017898	ENSSDUG00000017998 #14	ENSSDUG00000018018 #15	tmem150b (ENSSDUG00000018039)	adsl (ENSSDUG00000018054) #16	ENSSDUG00000018093	ENSSDUG00000018096 #17	atf4b (ENSSDUG00000018107) #18	ENSSDUG00000018116	ENSSDUG00000018135 #19	mief1 (ENSSDUG00000018158) #20	ENSSDUG00000018180 #21	ENSSDUG00000018187	mpst (ENSSDUG00000018202)	ENSSDUG00000018210 #22	il2rb (ENSSDUG00000018223) #23	ENSSDUG00000018239	papola (ENSSDUG00000018247)	chst12a (ENSSDUG00000018290)	ENSSDUG00000018311	ap5z1 (ENSSDUG00000018384)	mmd2a (ENSSDUG00000018411)	wipi2 (ENSSDUG00000018440)	ENSSDUG00000018482	smurf1 (ENSSDUG00000018578)	RNF216 (ENSSDUG00000018678)	FSCN1 (ENSSDUG00000018700)	ENSSDUG00000018712	TNRC18 (ENSSDUG00000018737)	slc29a4a (ENSSDUG00000018852)
Yellowtail amberjack	MODERN SPECIES	3256	ENSSLDG00000020543 #13	pvalb6 (ENSSLDG00000020512) #12	ENSSLDG00000020472 #14	ENSSLDG00000020457 #15	tmem150b (ENSSLDG00000020423)	adsl (ENSSLDG00000020384) #16	ENSSLDG00000020375	ENSSLDG00000020370 #17	atf4b (ENSSLDG00000020359) #18	ENSSLDG00000020356	ENSSLDG00000020337 #19	mief1 (ENSSLDG00000020322) #20	ENSSLDG00000020310 #21	TST (ENSSLDG00000020283)	mpst (ENSSLDG00000020278)	ENSSLDG00000020261 #22	ENSSLDG00000020153	C1QTNF6 (ENSSLDG00000020140)	papola (ENSSLDG00000020094)	chst12a (ENSSLDG00000020080)	CARD11 (ENSSLDG00000020041)	ap5z1 (ENSSLDG00000020003)	mmd2a (ENSSLDG00000019987)	wipi2 (ENSSLDG00000019957)	ENSSLDG00000019872	smurf1 (ENSSLDG00000019820)	ENSSLDG00000019779	RRP36 (ENSSLDG00000019741)
Barramundi perch	MODERN SPECIES	147	pvalb6 (ENSLCAG00010009056) #12	ENSLCAG00010009064 #14	ENSLCAG00010009072	tmem150b (ENSLCAG00010009076)	adsl (ENSLCAG00010009149) #16	ENSLCAG00010009629	atf4b (ENSLCAG00010009633) #18	ENSLCAG00010009639	ENSLCAG00010009642 #19	mief1 (ENSLCAG00010009647) #20	ENSLCAG00010009654	ENSLCAG00010009656	ENSLCAG00010009663	TST (ENSLCAG00010009666)	mpst (ENSLCAG00010009670)	ENSLCAG00010009675 #22	ENSLCAG00010009694 #23	ENSLCAG00010009698	chst12a (ENSLCAG00010009699)	ENSLCAG00010009702	ENSLCAG00010009712	ap5z1 (ENSLCAG00010009758)	MMD2 (ENSLCAG00010009861)	wipi2 (ENSLCAG00010009871)	ENSLCAG00010009895	smurf1 (ENSLCAG00010010006)	RNF216 (ENSLCAG00010010434)	FSCN1 (ENSLCAG00010010462)	ENSLCAG00010010498	TNRC18 (ENSLCAG00010010662)	slc29a4a (ENSLCAG00010010671)
Pleuronectoidei	ANCESTRAL SPECIES	2	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00940000156569.a.a #14	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT01030000234789	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00940000156614.b	ENSGT00940000158573	ENSGT00390000017592	ENSGT00940000157972.c	ENSGT00940000155537	ENSGT00940000160705.C.b	ENSGT00940000158690	ENSGT00510000048032	ENSGT00950000183157.a.a.b.c	ENSGT00950000182960.a.a.a.a	ENSGT00940000157099	ENSGT00950000182898.a.b	ENSGT00940000165557
Tongue sole	MODERN SPECIES	8	bud31 (ENSCSEG00000006343)	smcr8a (ENSCSEG00000006341)	pdap1b (ENSCSEG00000006316)	shmt1 (ENSCSEG00000006309)	ENSCSEG00000006306 #15	tmem150b (ENSCSEG00000006300)	adsl (ENSCSEG00000006283) #16	ENSCSEG00000006276 #17	atf4b (ENSCSEG00000006272) #18	ENSCSEG00000006270	ENSCSEG00000006264 #19	mief1 (ENSCSEG00000006260) #20	ENSCSEG00000006258	ENSCSEG00000006255 #21	mpst (ENSCSEG00000006250)	ENSCSEG00000006232 #22	mpst (ENSCSEG00000006230)	ENSCSEG00000006210 #23	ENSCSEG00000006203	chst12a (ENSCSEG00000006200)	CARD11 (ENSCSEG00000006194)	ap5z1 (ENSCSEG00000006177)	mmd2a (ENSCSEG00000006170)	wipi2 (ENSCSEG00000006152)	ENSCSEG00000006134	smurf1 (ENSCSEG00000006119)	ENSCSEG00000019168	FSCN1 (ENSCSEG00000019160)	actb (ENSCSEG00000019142)	ENSCSEG00000019119	ENSCSEG00000019109
Turbot	MODERN SPECIES	10	ENSSMAG00000007150 #10	ENSSMAG00000007259 #13	pvalb6 (ENSSMAG00000007278) #12	ENSSMAG00000007289 #14	ENSSMAG00000007321 #15	tmem150b (ENSSMAG00000007357)	adsl (ENSSMAG00000007394) #16	ENSSMAG00000027690	ENSSMAG00000007451	CTSD (ENSSMAG00000007486) #19	mief1 (ENSSMAG00000007530) #20	ENSSMAG00000021583	ENSSMAG00000024603	mpst (ENSSMAG00000026128)	mpst (ENSSMAG00000007579)	ENSSMAG00000007583 #22	il2rb (ENSSMAG00000029707) #23	ENSSMAG00000022084	ENSSMAG00000007619	ENSSMAG00000007688	ENSSMAG00000007786	drg2 (ENSSMAG00000007806)	gfer (ENSSMAG00000007843)	syngr3a (ENSSMAG00000007853) ##25	znf598 (ENSSMAG00000007867)	ENSSMAG00000007905	ENSSMAG00000008045	ENSSMAG00000008052	clcn7 (ENSSMAG00000008070)	ENSSMAG00000008102	ENSSMAG00000008143
Cod	MODERN SPECIES	23			ENSGMOG00000015047	ENSGMOG00000034152	ENSGMOG00000036645	ENSGMOG00000025716	tom1 (ENSGMOG00000037190)	ENSGMOG00000009256	mcm5 (ENSGMOG00000009241)	ENSGMOG00000034924	ENSGMOG00000000924 #19	ENSGMOG00000029260 #20	ENSGMOG00000020100	ENSGMOG00000023351	ENSGMOG00000014426	ENSGMOG00000014415 #22	ENSGMOG00000024064	ENSGMOG00000036928	ENSGMOG00000022980	ENSGMOG00000034365	ENSGMOG00000014006	ENSGMOG00000014078
Otomorpha	DUPLICATION
Otomorpha	ANCESTRAL SPECIES	520												ENSGT00510000048359	ENSGT00390000014665	ENSGT00940000155267	ENSGT00940000160374	ENSGT00550000075088.a.b.a #22	ENSGT00390000001260	ENSGT00940000164903.a
Otophysi	ANCESTRAL SPECIES	376												ENSGT00510000048359	ENSGT00390000014665	ENSGT00940000155267	ENSGT00940000160374	ENSGT00550000075088.a.b.a #22	ENSGT00940000167095.A	ENSGT00390000001260	ENSGT00940000164903.a
Characiphysae	ANCESTRAL SPECIES	49	ENSGT00940000165400	ENSGT01030000234592.A.b.b.b.a	ENSGT00940000162478	ENSGT00550000075038.a	ENSGT00550000075038.b	ENSGT00950000183184.b.a ##26	ENSGT00940000158410.g.a.b ##30	ENSGT01060000248595.b.a.b.b.a.b	ENSGT00940000160609.e	ENSGT00390000002069	ENSGT00990000204511	ENSGT00510000048359	ENSGT00390000014665	ENSGT00940000155267	ENSGT00940000160374	ENSGT00550000075088.a.b.a #22	ENSGT00940000167095.A	ENSGT00390000001260	ENSGT00940000164903.a	ENSGT00940000154852.a	ENSGT00530000066748	ENSGT00940000159861	ENSGT00390000008957	ENSGT00940000160173	ENSGT00940000158109	ENSGT00810000125570	ENSGT00940000160651	ENSGT00530000064671	ENSGT00940000159396	ENSGT00940000156610	ENSGT00390000000306
Channel catfish	MODERN SPECIES		ccr10 (ENSIPUG00000000289)	ENSIPUG00000000291	ENSIPUG00000000293	ENSIPUG00000000296	dcakd (ENSIPUG00000000297)	FAM171A2 (ENSIPUG00000000301) ##26	CRHR1 (ENSIPUG00000000305) ##30	CPT1C (ENSIPUG00000000309)	ENSIPUG00000000316	dnaaf3 (ENSIPUG00000000326)	ENSIPUG00000000331	gnptg (ENSIPUG00000000335)	tsr3 (ENSIPUG00000000336)	pdpk1b (ENSIPUG00000000337)	ENSIPUG00000000342	ube2ib (ENSIPUG00000000347) #22	ENSIPUG00000000357	cog7 (ENSIPUG00000000362)	ENSIPUG00000000368	SBK1 (ENSIPUG00000000372)	ENSIPUG00000000373	nlrc3 (ENSIPUG00000000374)	cluap1 (ENSIPUG00000000376)	wdr90 (ENSIPUG00000000379)	rhot2 (ENSIPUG00000000387)	H1F0 (ENSIPUG00000000398)	rhbdl1 (ENSIPUG00000000404)	zgc:112496 (ENSIPUG00000000420)	wdr24 (ENSIPUG00000000424)	Anks3 (ENSIPUG00000000435)	c1h8orf33 (ENSIPUG00000000439)
Characiphysae_b	ANCESTRAL SPECIES	99					ENSGT00550000075038.b	ENSGT00950000183184.b.a ##26	ENSGT00940000158410.g.a.b ##30	ENSGT01060000248595.b.a.b.b.a.b	ENSGT00940000160609.e	ENSGT00390000002069	ENSGT00990000204511.a	ENSGT00510000048359	ENSGT00390000014665	ENSGT00940000155267	ENSGT00940000160374	ENSGT00550000075088.a.b.a #22	ENSGT00940000167095.A	ENSGT00390000001260	ENSGT00940000164903.a	ENSGT00940000154852.a	ENSGT00530000066748	ENSGT00940000159861	ENSGT00390000008957	ENSGT00940000171912	ENSGT00940000160173	ENSGT00940000158109	ENSGT00810000125570	ENSGT00940000160651	ENSGT00530000064671	ENSGT00940000159396	ENSGT00940000156610
Characoidei	ANCESTRAL SPECIES	60	ENSGT00940000179222	ENSGT00940000165400	ENSGT01030000234592.A.b.b.b.a	ENSGT00940000162478	ENSGT00550000075038.a	ENSGT00950000183184.b.a ##26	ENSGT00940000158410.g.a.b ##30	ENSGT01060000248595.b.a.b.b.a.b	ENSGT00940000160609.e	ENSGT00390000002069	ENSGT00990000204511.a	ENSGT00510000048359	ENSGT00390000014665	ENSGT00940000155267	ENSGT00940000160374	ENSGT00550000075088.a.b.a #22	ENSGT00940000167095.A	ENSGT00390000001260	ENSGT00940000164903.a	ENSGT00940000154852.a	ENSGT00530000066748	ENSGT00940000159861	ENSGT00390000008957	ENSGT00940000160173	ENSGT00940000158109	ENSGT00810000125570	ENSGT00940000160651	ENSGT00530000064671	ENSGT00940000159396	ENSGT00940000156610	ENSGT00390000000306
Red-bellied piranha	MODERN SPECIES	70	ccr10 (ENSPNAG00000014227)	ENSPNAG00000014225	ENSPNAG00000014220	C1QL1 (ENSPNAG00000014205)	dcakd (ENSPNAG00000014194)	FAM171A2 (ENSPNAG00000014175) ##26	CRHR1 (ENSPNAG00000014160) ##30	ENSPNAG00000003026	ENSPNAG00000014014	dnaaf3 (ENSPNAG00000002694)	ENSPNAG00000013288	gnptg (ENSPNAG00000002682)	tsr3 (ENSPNAG00000002671)	pdpk1b (ENSPNAG00000013265)	ENSPNAG00000002624	ube2ib (ENSPNAG00000002592) #22	ENSPNAG00000013152	cog7 (ENSPNAG00000013140)	kcnc3b (ENSPNAG00000002550)	SBK1 (ENSPNAG00000002535)	ENSPNAG00000002526	NLRC3 (ENSPNAG00000013023)	cluap1 (ENSPNAG00000013013)	WDR90 (ENSPNAG00000012985)	rhot2 (ENSPNAG00000012869)	h1-0 (ENSPNAG00000006809)	ENSPNAG00000002382	ENSPNAG00000012749	rhbdl1 (ENSPNAG00000012743)	zgc:112496 (ENSPNAG00000012729)	wdr24 (ENSPNAG00000002356)
Mexicana tetra	MODERN SPECIES	2	ENSAMXG00000025619	ENSAMXG00000037172	C1QL1 (ENSAMXG00000035401)	dcakd (ENSAMXG00000012074)	ENSAMXG00000039987	FAM171A2 (ENSAMXG00000032013) ##26	CRHR1 (ENSAMXG00000038656) ##30	ENSAMXG00000012048	ENSAMXG00000012044	dnaaf3 (ENSAMXG00000012033)	ENSAMXG00000037020	gnptg (ENSAMXG00000038348)	tsr3 (ENSAMXG00000034086)	pdpk1b (ENSAMXG00000012001)	ENSAMXG00000011993	ube2ib (ENSAMXG00000031406) #22	ENSAMXG00000040411	cog7 (ENSAMXG00000011966)	kcnc3b (ENSAMXG00000011957)	NLRC3 (ENSAMXG00000007153)	cluap1 (ENSAMXG00000007155)	ENSAMXG00000031513	ENSAMXG00000035156	rhot2 (ENSAMXG00000007201)	h1-0 (ENSAMXG00000025194)	rhbdl1 (ENSAMXG00000007206)	zgc:112496 (ENSAMXG00000040622)	wdr24 (ENSAMXG00000007215)	anks3 (ENSAMXG00000007218)	zgc:112185 (ENSAMXG00000007222)	ENSAMXG00000037939
Electric eel	MODERN SPECIES	174						ENSEEEG00000009238	ENSEEEG00000009240	hspa8b (ENSEEEG00000009266)	ENSEEEG00000010559	picalmb (ENSEEEG00000010562)	ZPLD1 (ENSEEEG00000010565)	alcamb (ENSEEEG00000010582)	tsr3 (ENSEEEG00000010806)	pdpk1b (ENSEEEG00000010835)	ENSEEEG00000011405	ube2ib (ENSEEEG00000011412) #22	cog7 (ENSEEEG00000011451)	kcnc3b (ENSEEEG00000011456)	ENSEEEG00000011457	SBK1 (ENSEEEG00000011458)	ENSEEEG00000011459	ENSEEEG00000011461	NLRC3 (ENSEEEG00000011464)	cluap1 (ENSEEEG00000011471)	ENSEEEG00000011474	enpp2 (ENSEEEG00000011475)	ENSEEEG00000011477	taf2 (ENSEEEG00000011482)	ca14 (ENSEEEG00000011858)	ENSEEEG00000011859	prpf3 (ENSEEEG00000011861)
Cyprinoidei	ANCESTRAL SPECIES	98	ENSGT00940000156610	ENSGT00940000159396	ENSGT00530000064671	ENSGT00940000160651	ENSGT00810000125570	ENSGT00940000158109	ENSGT00940000160173	ENSGT00390000008957	ENSGT00940000159861	ENSGT00530000066748	ENSGT00940000154852.a	ENSGT00510000048359	ENSGT00390000014665	ENSGT00940000155267	ENSGT00940000160374	ENSGT00550000075088.a.b.a #22	ENSGT00940000167095.A	ENSGT00390000001260	ENSGT00940000164903.a	ENSGT00390000002069	ENSGT01060000248595.b.a.b.b.a.b	ENSGT00950000183184.b.a ##26	ENSGT00550000075038	ENSGT00940000162478	ENSGT00940000165400	ENSGT00940000168205	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000157371.lb.a	ENSGT00940000156292.g.a	ENSGT00940000157961.A	ENSGT00940000158710
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	617								ENSGT00940000160173	ENSGT00390000008957.g.a	ENSGT00940000159861.j	ENSGT00940000154852.a.h	ENSGT00510000048359.e	ENSGT00390000014665.h	ENSGT00940000155267.s.b	ENSGT00940000160374.d.a.b	ENSGT00550000075088.a.b.a.a #22	ENSGT00940000167095.A.a	ENSGT00390000001260.h	ENSGT00940000164903.a.d	ENSGT01050000246604.B	ENSGT01050000246604.A	ENSGT01060000248595.b.a.b.b.a.b.b	ENSGT00950000183184.b.a.a.a ##26
Cyprininae_a	ANCESTRAL SPECIES	100	ENSGT00990000214316	ENSGT00940000159396.g.b	ENSGT00490000044657	ENSGT00940000160651.d	ENSGT00810000125570.f	ENSGT00940000158109.c	ENSGT00390000008957.h	ENSGT00940000159861.i	ENSGT00530000066748.e	ENSGT00940000154852.a.g	ENSGT00510000048359.f	ENSGT00390000014665.g	ENSGT00940000155267.s.a	ENSGT00940000160374.d.a.a	ENSGT00550000075088.a.b.a.b #22	ENSGT00550000075088.a.b.a.a #22	ENSGT00940000167095.A.b	ENSGT00390000001260.g	ENSGT00940000154641.C.b.k.b	ENSGT00390000002069.a	ENSGT01060000248595.b.a.b.b.a.b.a	ENSGT00950000183184.b.a.a.b ##26	ENSGT00550000075038.d	ENSGT00940000162478.e.b	ENSGT00940000165400	ENSGT00940000168205.b	ENSGT01030000234667.a.a.a.a.a.d	ENSGT00940000157371.lb.a	ENSGT00940000156292.g.a.e	ENSGT00940000157961.A.a.a.b	ENSGT00940000158710.c
Golden-line barbel	MODERN SPECIES	18	zgc:112185 (ENSSGRG00000007483)	anks3 (ENSSGRG00000007485)	wdr24 (ENSSGRG00000007486)	rhbdl1 (ENSSGRG00000007489)	h1-0 (ENSSGRG00000007491)	rhot2 (ENSSGRG00000007494)	WDR90 (ENSSGRG00000007503)	cluap1 (ENSSGRG00000007507)	NLRC3 (ENSSGRG00000007508)	ENSSGRG00000007600	SBK1 (ENSSGRG00000007605)	gnptg (ENSSGRG00000007631)	tsr3 (ENSSGRG00000007710)	pdpk1b (ENSSGRG00000007764)	ENSSGRG00000008946	ube2ib (ENSSGRG00000008952) #22	cog7 (ENSSGRG00000009064)	kcnc3b (ENSSGRG00000009295)	ENSSGRG00000009302	ENSSGRG00000009303	ENSSGRG00000009336	ENSSGRG00000011083 ##26	FAM171A2 (ENSSGRG00000011084) ##26	dcakd (ENSSGRG00000011085)	C1QL1 (ENSSGRG00000011086)	ENSSGRG00000011087	ENSSGRG00000011088	ENSSGRG00000011089	ENSSGRG00000011090	FMNL1 (ENSSGRG00000011095)	ENSSGRG00000011300
Common carp reference	MODERN SPECIES	14	anks3 (ENSCCRG00000019038)	wdr24 (ENSCCRG00000019053)	ENSCCRG00000082551	rhbdl1 (ENSCCRG00000056535)	h1-0 (ENSCCRG00000067178)	rhot2 (ENSCCRG00000032810)	ENSCCRG00000056113	cluap1 (ENSCCRG00000063754)	ENSCCRG00000052310	ENSCCRG00000079349	ENSCCRG00000078512	gnptg (ENSCCRG00000056331)	tsr3 (ENSCCRG00000008029)	pdpk1b (ENSCCRG00000052983)	ENSCCRG00000055061	ube2ib (ENSCCRG00000007989) #22	ENSCCRG00000067688	cog7 (ENSCCRG00000013907)	kcnc3b (ENSCCRG00000053153)	ENSCCRG00000003033	ENSCCRG00000073034	dnaaf3 (ENSCCRG00000006457)	ENSCCRG00000002988	ENSCCRG00000055649 ##26	ENSCCRG00000059641	ENSCCRG00000080949	ENSCCRG00000081868	ccr10 (ENSCCRG00000017530)	ENSCCRG00000067883	ENSCCRG00000053799	ENSCCRG00000056595
Cyprininae	ANCESTRAL SPECIES	191	ENSGT00510000049652.a	ENSGT00990000214316	ENSGT00940000159396.g.b	ENSGT00530000064671.e.b	ENSGT00940000160651.d	ENSGT00810000125570.f	ENSGT00940000158109.c	ENSGT00390000008957.h	ENSGT00940000159861.i	ENSGT00530000066748	ENSGT00940000154852.a.g	ENSGT00510000048359.f	ENSGT00390000014665.g	ENSGT00940000155267.s.a	ENSGT00940000160374.d.a.a	ENSGT00550000075088.a.b.a.b #22	ENSGT00940000167095.A.b	ENSGT00390000001260.g	ENSGT00940000154641.C.b.k.b	ENSGT00390000002069.a	ENSGT01060000248595.b.a.b.b.a.b.a	ENSGT00950000183184.b.a.a.b ##26	ENSGT00550000075038.d	ENSGT00940000162478.e.b	ENSGT00940000165400	ENSGT00940000168205.b	ENSGT01030000234667.a.a.a.a.a.d	ENSGT00940000157371.lb.a	ENSGT00940000156292.g.a.e	ENSGT00940000157961.A.a.a.b	ENSGT00940000158710.c
Goldfish	MODERN SPECIES	1513	rab11fip3 (ENSCARG00000041930)	decr2 (ENSCARG00000041957)	ENSCARG00000042123	ENSCARG00000042145	wdr24 (ENSCARG00000042187)	zgc:112496 (ENSCARG00000042296)	rhbdl1 (ENSCARG00000042322)	h1-0 (ENSCARG00000042361)	NLRC3 (ENSCARG00000042899)	ENSCARG00000043086	SBK1 (ENSCARG00000043179)	tsr3 (ENSCARG00000043191)	pdpk1b (ENSCARG00000043425)	ENSCARG00000046296	ENSCARG00000046336	ube2ib (ENSCARG00000046367) #22	cog7 (ENSCARG00000046443)	kcnc3b (ENSCARG00000046571)	ENSCARG00000046606	ENSCARG00000046643	dnaaf3 (ENSCARG00000028963)	CPT1C (ENSCARG00000029049)	FAM171A2 (ENSCARG00000029762) ##26	C1QL1 (ENSCARG00000029770)	ENSCARG00000029772	ccr10 (ENSCARG00000029777)	ENSCARG00000029785	FMNL1 (ENSCARG00000029794)	SRCIN1 (ENSCARG00000029951)	GRB7 (ENSCARG00000030010)	arf2b (ENSCARG00000030040)
Cyprininae_a	ANCESTRAL SPECIES	100	ENSGT00510000049652.a	ENSGT00990000214316	ENSGT00940000159396.g.b	ENSGT00490000044657	ENSGT00940000160651.d	ENSGT00810000125570.f	ENSGT00940000158109.c	ENSGT00390000008957.h	ENSGT00940000159861.i	ENSGT00530000066748.e	ENSGT00940000154852.a.g	ENSGT00510000048359.f	ENSGT00390000014665.g	ENSGT00940000155267.s.a	ENSGT00940000160374.d.a.a	ENSGT00550000075088.a.b.a.b #22	ENSGT00550000075088.a.b.a.a #22	ENSGT00940000167095.A.b	ENSGT00390000001260.g	ENSGT00940000154641.C.b.k.b	ENSGT00390000002069.a	ENSGT01060000248595.b.a.b.b.a.b.a	ENSGT00950000183184.b.a.a.b ##26	ENSGT00550000075038.d	ENSGT00940000162478.e.b	ENSGT00940000165400	ENSGT00940000168205.b	ENSGT01030000234667.a.a.a.a.a.d	ENSGT00940000157371.lb.a	ENSGT00940000156292.g.a.e	ENSGT00940000157961.A.a.a.b
Golden-line barbel	MODERN SPECIES	269															ENSSGRG00000048880	ube2ib (ENSSGRG00000048872) #22	cog7 (ENSSGRG00000048698)	kcnc3b (ENSSGRG00000048693)	ENSSGRG00000048691	ENSSGRG00000048690	CPT1C (ENSSGRG00000048198)	FAM171A2 (ENSSGRG00000048190) ##26	dcakd (ENSSGRG00000048189)	C1QL1 (ENSSGRG00000048188)	ENSSGRG00000048187	ccr10 (ENSSGRG00000048186)	ENSSGRG00000048185	FMNL1 (ENSSGRG00000048183)	srcin1b (ENSSGRG00000048180)	GRB7 (ENSSGRG00000048179)	ENSSGRG00000048178
Zebrafish	MODERN SPECIES	16	anks3 (ENSDARG00000038557)	wdr24 (ENSDARG00000025507)	zgc:112496 (ENSDARG00000004274)	rhbdl1 (ENSDARG00000087040)	h1-0 (ENSDARG00000038559)	rhot2 (ENSDARG00000056328)	WDR90 (ENSDARG00000079241)	cluap1 (ENSDARG00000079110)	NLRC3 (ENSDARG00000103146)	ENSDARG00000092499	SBK1 (ENSDARG00000056294)	gnptg (ENSDARG00000038566)	tsr3 (ENSDARG00000038567)	pdpk1b (ENSDARG00000018285)	KCTD5 (ENSDARG00000098817)	ube2ib (ENSDARG00000007438) #22	cog7 (ENSDARG00000061372)	kcnc3b (ENSDARG00000098816)	dnaaf3 (ENSDARG00000092662)	ENSDARG00000036304	ENSDARG00000061660	FAM171A2 (ENSDARG00000079656) ##26	dcakd (ENSDARG00000061638)	ENSDARG00000061672	ENSDARG00000087020	ccr10 (ENSDARG00000040643)	ENSDARG00000056502	ENSDARG00000104263	srcin1b (ENSDARG00000101812)	GRB7 (ENSDARG00000042726)	arf2b (ENSDARG00000016393)
Clupeiformes	ANCESTRAL SPECIES	262	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000163949.a	ENSGT00550000075078	ENSGT00390000005900	ENSGT00950000182881.a.a.b.i.a	ENSGT00950000182910.b.g.a	ENSGT00940000166481	ENSGT00940000167630	ENSGT00940000165368	ENSGT00940000167839	ENSGT01080000257420.C.b.b.c.b	ENSGT00510000048359	ENSGT00390000014665	ENSGT00940000155267	ENSGT00940000160374	ENSGT00550000075088.a.b.a #22	ENSGT00390000001260	ENSGT00940000164903.a
Atlantic herring	MODERN SPECIES	15	zgc:56095 (ENSCHAG00000013770)	ENSCHAG00000013740	ENSCHAG00000013731	ENSCHAG00000013693	stat5b (ENSCHAG00000013587)	ENSCHAG00000013548	ENSCHAG00000013471	ENSCHAG00000013455	ENSCHAG00000013426	ENSCHAG00000013274	ENSCHAG00000013099	gnptg (ENSCHAG00000013077)	tsr3 (ENSCHAG00000013002)	pdpk1b (ENSCHAG00000012143)	kctd5a (ENSCHAG00000012072)	ube2ib (ENSCHAG00000012026) #22	cog7 (ENSCHAG00000011849)	kcnc3b (ENSCHAG00000011815)	ogfod3 (ENSCHAG00000011731)	ENSCHAG00000011723	ENSCHAG00000011654	ENSCHAG00000010401	dlgap5 (ENSCHAG00000010329)	ccz1 (ENSCHAG00000009621)	pvalb9 (ENSCHAG00000009595)	ENSCHAG00000009581	pvalb2 (ENSCHAG00000009511)	bhlha15 (ENSCHAG00000009497)	TECPR1 (ENSCHAG00000009270)	baiap2l1a (ENSCHAG00000009001) ##13	gspt1 (ENSCHAG00000006964)
Otomorpha	ANCESTRAL SPECIES	27	ENSGT00940000159653.g.a #12	ENSGT00940000178227.a	ENSGT00940000157367.a.a #15	ENSGT00940000160024	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a	ENSGT00940000166816 #17	ENSGT00530000063801.a.b #18	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00950000183045.A.b	ENSGT00970000196672	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00390000008221.b	ENSGT00940000160724 #27	ENSGT00940000176123	ENSGT00940000158410.g.a.a #30	ENSGT00950000182950.C #31	ENSGT00530000063688.b.nb.b #32	ENSGT00940000155494.j #33	ENSGT01030000234570.d.b.a.b.b.a.a #34	ENSGT00940000159417 #35	ENSGT00950000182818.D	ENSGT00390000018397 #36	ENSGT00990000204364	ENSGT00940000171795
Otophysi	ANCESTRAL SPECIES	273	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000158365.f.b	ENSGT00940000155497.a.a	ENSGT00940000153657.A	ENSGT00390000001347	ENSGT00940000155618	ENSGT00940000165277.b	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00950000183045.A.b	ENSGT00970000196672	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00390000008221.b
Characiphysae	ANCESTRAL SPECIES	26							ENSGT00390000001347	ENSGT00940000153657.A	ENSGT00940000155497.a.a	ENSGT00940000158365.f.b	ENSGT00730000111100.a.a	ENSGT00940000160179	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00390000008221.b	ENSGT00940000153909.a	ENSGT00940000156748	ENSGT00390000012605	ENSGT00390000015438	ENSGT00550000074902	ENSGT00940000153432.A.a.i	ENSGT00390000014620	ENSGT00940000168279	ENSGT00940000154744.a.a	ENSGT00730000111191	ENSGT00940000156854.t.a.a	ENSGT00940000176898
Characiphysae_b	ANCESTRAL SPECIES	235						ENSGT00940000155618	ENSGT00390000001347	ENSGT00940000153657.A	ENSGT00940000155497.a.a	ENSGT00940000158365.f.b	ENSGT00730000111100.a.a	ENSGT00940000160179	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b.b #22
Characoidei	ANCESTRAL SPECIES	272		ENSGT01100000263483.F.b.a.b	ENSGT00920000149129	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00940000155618	ENSGT00390000001347	ENSGT00940000153657.A	ENSGT00940000155497.a.a	ENSGT00940000158365.f.b	ENSGT00730000111100.a.a	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b.b #22
Red-bellied piranha	MODERN SPECIES	392	ENSPNAG00000019341	ENSPNAG00000019332	ENSPNAG00000003590	ENSPNAG00000019301	rbx1 (ENSPNAG00000019261)	st13 (ENSPNAG00000019242)	xpnpep3 (ENSPNAG00000019129)	EP300 (ENSPNAG00000019108)	cbx7a (ENSPNAG00000003564)	desi1a (ENSPNAG00000018941)	ENSPNAG00000018915	ENSPNAG00000018854 #19	mief1 (ENSPNAG00000018819) #20	ENSPNAG00000003552 #21	mpst (ENSPNAG00000018758)	ENSPNAG00000018749 #22	ENSPNAG00000018720
Mexicana tetra	MODERN SPECIES	15	ENSAMXG00000044030	ENSAMXG00000025001	ENSAMXG00000040045	ENSAMXG00000029440	rbx1 (ENSAMXG00000030622)	st13 (ENSAMXG00000038131)	xpnpep3 (ENSAMXG00000013643)	EP300 (ENSAMXG00000013602)	ENSAMXG00000013576	desi1a (ENSAMXG00000030892)	ENSAMXG00000008242	ENSAMXG00000030217 #19	mief1 (ENSAMXG00000013513) #20	ENSAMXG00000038245 #21	mpst (ENSAMXG00000038351)	ENSAMXG00000040742 #22	pald1a (ENSAMXG00000033318)	ENSAMXG00000037084	ENSAMXG00000038387	ENSAMXG00000038937	ENSAMXG00000041694	ENSAMXG00000030472	ENSAMXG00000043402	OPRD1 (ENSAMXG00000032485)	ENSAMXG00000000019	edn2 (ENSAMXG00000040461)	ENSAMXG00000041708	serinc2 (ENSAMXG00000000681)	ENSAMXG00000034229	stmn1a (ENSAMXG00000037071)	ENSAMXG00000031628
Electric eel	MODERN SPECIES	356									st13 (ENSEEEG00000023274)	rbx1 (ENSEEEG00000023280)	ENSEEEG00000023281	napsa (ENSEEEG00000023282)	mief1 (ENSEEEG00000023286) #20	ENSEEEG00000023288	mpst (ENSEEEG00000023290)	ENSEEEG00000023291 #22	ENSEEEG00000023295	ssuh2.4 (ENSEEEG00000023299)	ENSEEEG00000023301	RPL32 (ENSEEEG00000023305)	cand2 (ENSEEEG00000023309)	sec13 (ENSEEEG00000023311)	GRIP2 (ENSEEEG00000023313)	slc6a6b (ENSEEEG00000023351)	LSM3 (ENSEEEG00000023576)	zgc:171566 (ENSEEEG00000023578)	mcm2 (ENSEEEG00000023589)	ccdc51 (ENSEEEG00000023629)	ENSEEEG00000023631	ENSEEEG00000023632	dnase1l4.2 (ENSEEEG00000023633)
Cyprinoidei	ANCESTRAL SPECIES	77	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000158365.f.b	ENSGT00940000155497.a.a	ENSGT00940000153657.A	ENSGT00390000001347	ENSGT00940000155618	ENSGT00940000165277.b	ENSGT00940000160179	ENSGT00390000013127.a #20	ENSGT00740000115744 #21	ENSGT00950000183045.A.b	ENSGT00970000196672	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00390000008221.b	ENSGT00940000154705.A.a	ENSGT00940000155563.k.a.a	ENSGT01050000244891.E.a.b	ENSGT00940000154830.c	ENSGT00940000155738	ENSGT00940000154272.B.b	ENSGT00940000158772.b	ENSGT00940000153882.a.b.a	ENSGT00530000063753.B.c	ENSGT00440000038745.a.a.a	ENSGT00390000010047.g.a	ENSGT00530000063753.A.b
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	73	ENSGT00940000163663.A.a.c	ENSGT00730000111100.a.a.a	ENSGT00940000158365.f.b.h	ENSGT00940000155497.a.a.a	ENSGT00940000153657.A.i	ENSGT00390000001347.d	ENSGT00940000155618	ENSGT00940000165277.b	ENSGT00940000155733.a.b.b.a.a #19	ENSGT00390000013127.a.u #20	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a.b	ENSGT00950000183045.A.b	ENSGT00970000196672.b	ENSGT00510000046773.a.b.c.a.a	ENSGT00550000075088.a.b.b.a.a #22	ENSGT00510000049239.a.c.a #23	ENSGT00940000160396.c	ENSGT00390000008221.b.b	ENSGT00940000154705.A.a.d	ENSGT00940000155563.k.a.a.a	ENSGT01050000244891.E.a.b.a.a	ENSGT00940000154830.c.a	ENSGT00940000155738.ab.a.b	ENSGT00940000154272.B.b.b	ENSGT00940000158772.b.a	ENSGT00940000153882.a.b.a.j.a	ENSGT00530000063753.A.b.b	ENSGT00530000063599.A.f	ENSGT00440000038745.a.a.b.g.b	ENSGT00940000156865.b.b
Cyprininae_a	ANCESTRAL SPECIES	93	ENSGT00950000182979.a.a.a.a.j	ENSGT00940000163663.A.a.c	ENSGT00730000111100.a.a.a	ENSGT00940000158365.f.b.h	ENSGT00940000155497.a.a.a	ENSGT00940000153657.A.i	ENSGT00390000001347.d	ENSGT00940000155618	ENSGT00940000165277.b	ENSGT00940000155733.a.b.b.a.a #19	ENSGT00390000013127.a.u #20	ENSGT00990000209944	ENSGT00970000196672.a	ENSGT00970000196672.b	ENSGT00510000046773.a.b.c.a.a	ENSGT00550000075088.a.b.b.a.a #22	ENSGT00510000049239.a.c.a #23	ENSGT00940000160396.c	ENSGT00390000008221.b.b	ENSGT00940000154705.A.a.d	ENSGT00940000155563.k.a.a.a	ENSGT01050000244891.E.a.b.a.a	ENSGT00940000154830.c.a	ENSGT00940000155738.ab.a.b	ENSGT00940000154272.B.b.b	ENSGT00940000158772.b.a	ENSGT00940000153882.a.b.a.j.a	ENSGT00530000063753.A.b.b	ENSGT00530000063599.A.f	ENSGT00440000038745.a.a.b.g.b	ENSGT00940000156865.b.b
Common carp reference	MODERN SPECIES	3	ENSCCRG00000014780	ENSCCRG00000069149	slc25a17 (ENSCCRG00000014784)	ENSCCRG00000080080	ENSCCRG00000080490	desi1a (ENSCCRG00000058164)	cbx7a (ENSCCRG00000013587)	ENSCCRG00000013652	xpnpep3 (ENSCCRG00000010308)	st13 (ENSCCRG00000026570)	rbx1 (ENSCCRG00000010324)	ENSCCRG00000049054 #19	mief1 (ENSCCRG00000078221) #20	ENSCCRG00000055363 #21	mpst (ENSCCRG00000056938)	ENSCCRG00000059620 #22	ENSCCRG00000068871	il2rb (ENSCCRG00000004197) #23	ENSCCRG00000069412	mgat3a (ENSCCRG00000078535)	ddx5 (ENSCCRG00000073555)	smurf2 (ENSCCRG00000068445)	kpna2 (ENSCCRG00000010672)	ENSCCRG00000010871	grb2b (ENSCCRG00000012723)	ENSCCRG00000071516	ENSCCRG00000057714	ntn1b (ENSCCRG00000042266)	ENSCCRG00000064846	mfsd6l (ENSCCRG00000054768)	zgc:171844 (ENSCCRG00000000941)
Goldfish	MODERN SPECIES	22	CLIP3 (ENSCARG00000062024)	ENSCARG00000062297	desi1a (ENSCARG00000062303)	cbx7a (ENSCARG00000062314)	EP300 (ENSCARG00000062414)	xpnpep3 (ENSCARG00000063641)	ENSCARG00000063786	ENSCARG00000063803	st13 (ENSCARG00000063847)	rbx1 (ENSCARG00000064356)	ENSCARG00000000212 #19	mief1 (ENSCARG00000000252) #20	ENSCARG00000000263	ENSCARG00000000268	mpst (ENSCARG00000000274)	ENSCARG00000000284 #22	il2rb (ENSCARG00000000295) #23	ENSCARG00000000304	mgat3a (ENSCARG00000000313)	ddx5 (ENSCARG00000000338)	smurf2 (ENSCARG00000000493)	kpna2 (ENSCARG00000000964)	BPTF (ENSCARG00000001062)	grb2b (ENSCARG00000001169)	MCHR1 (ENSCARG00000001171)	ENSCARG00000001175	ENSCARG00000001187	ENSCARG00000001190	sp100.4 (ENSCARG00000001193)	ENSCARG00000001196	dnal4a (ENSCARG00000001203) #8
Cyprininae	ANCESTRAL SPECIES	24	ENSGT00940000166738.d	ENSGT01060000249904.c.a	ENSGT01060000249904.c.b	ENSGT00940000169047.b.b.a.b	ENSGT00940000169047.b.a.a	ENSGT00940000163472.i.a.a.e	ENSGT00920000149129.k	ENSGT01100000263483.F.b.a.b.b.a	ENSGT00950000182979.a.a.a.a.i	ENSGT00940000163663.A.a.d	ENSGT00730000111100.a.a.b	ENSGT00940000158365.f.b.g	ENSGT00940000155497.a.a.b	ENSGT00940000153657.A.j	ENSGT00390000001347.c	ENSGT00550000075088.a.b.b.a.b #22	ENSGT00510000049239.a.c.b #23	ENSGT00940000160396.d	ENSGT00390000008221.b.a	ENSGT00940000154705.A.a.c	ENSGT00940000155563.k.a.a.b	ENSGT01050000244891.E.a.b.a.b	ENSGT00940000154830.c.b	ENSGT00940000155738.ab.a.a	ENSGT00940000154272.B.b.a	ENSGT00940000158772.b.b	ENSGT00940000153882.a.b.a.j.b	ENSGT00530000063753.A.b.a	ENSGT00530000063599.A.e	ENSGT00440000038745.a.a.b.g.a	ENSGT00940000156865.b.a
Goldfish	MODERN SPECIES	20	ENSCARG00000013962	ENSCARG00000013953	ENSCARG00000013946	ENSCARG00000013945	desi1a (ENSCARG00000013942)	cbx7a (ENSCARG00000013935)	EP300 (ENSCARG00000030241)	st13 (ENSCARG00000029876)	RBX1 (ENSCARG00000029867)	ENSCARG00000029860	ENSCARG00000029252 #19	mief1 (ENSCARG00000029213) #20	ENSCARG00000029206	ENSCARG00000029195	ENSCARG00000029189	ENSCARG00000029002 #22	il2rb (ENSCARG00000028973) #23	ENSCARG00000028968	mgat3a (ENSCARG00000028951)	ddx5 (ENSCARG00000027931)	smurf2 (ENSCARG00000027623)	kpna2 (ENSCARG00000027470)	BPTF (ENSCARG00000027136)	grb2b (ENSCARG00000027104)	mch-r1 (ENSCARG00000027093)	ENSCARG00000027088	ntn1b (ENSCARG00000027066)	ENSCARG00000027058	ENSCARG00000027030	mfsd6l (ENSCARG00000027020)	zgc:171844 (ENSCARG00000027007)
Cyprininae_a	ANCESTRAL SPECIES	12	ENSGT00940000169047.b.a.a	ENSGT00940000163472.i.a.a.e	ENSGT00920000149129.k	ENSGT01100000263483.F.b.a.b.b.a	ENSGT00950000182979.a.a.a.a.i	ENSGT00940000163663.A.a.d	ENSGT00730000111100.a.a.b	ENSGT00940000158365.f.b.g	ENSGT00940000155497.a.a.b	ENSGT00940000153657.A.j	ENSGT00390000001347.c	ENSGT00940000155733.a.b.b.b #19	ENSGT00390000013127.a.t #20	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a.b	ENSGT00550000075088.a.b.b.a.b #22	ENSGT00510000049239.a.c.b #23	ENSGT00940000160396.d	ENSGT00390000008221.b.a	ENSGT00940000154705.A.a.c	ENSGT00940000155563.k.a.a.b	ENSGT01050000244891.E.b	ENSGT00940000154830.c.b	ENSGT00940000155738.ab.a.a	ENSGT00940000154272.B.b.a	ENSGT00940000158772.b.b	ENSGT00940000153882.a.b.a.j.b	ENSGT00530000063753.A.b.a	ENSGT00530000063599.A.e	ENSGT00440000038745.a.a.b.g.a	ENSGT00940000156865.b.a
Golden-line barbel	MODERN SPECIES	51	ENSSGRG00000018177	slc25a17 (ENSSGRG00000018176)	ENSSGRG00000018174	ENSSGRG00000018171	desi1a (ENSSGRG00000018170)	cbx7a (ENSSGRG00000018169)	EP300 (ENSSGRG00000017514)	xpnpep3 (ENSSGRG00000017418)	st13 (ENSSGRG00000017415)	ENSSGRG00000017412	ENSSGRG00000017410 #19	mief1 (ENSSGRG00000017409) #20	ENSSGRG00000017408	ENSSGRG00000017407	mpst (ENSSGRG00000017404)	ENSSGRG00000017196 #22	il2rb (ENSSGRG00000017193) #23	ENSSGRG00000017192	ddx5 (ENSSGRG00000016574)	smurf2 (ENSSGRG00000016569)	ENSSGRG00000016568	ENSSGRG00000016567	ENSSGRG00000016566	BPTF (ENSSGRG00000015813)	grb2b (ENSSGRG00000015809)	ENSSGRG00000015794	ntn1b (ENSSGRG00000015779)	ENSSGRG00000015776	mfsd6l (ENSSGRG00000015775)	zgc:171844 (ENSSGRG00000015774)	tom1 (ENSSGRG00000015773)
Common carp reference	MODERN SPECIES	1	ENSCCRG00000022487	ENSCCRG00000081929	ENSCCRG00000056851	desi1a (ENSCCRG00000053242)	cbx7a (ENSCCRG00000057686)	ENSCCRG00000027159	st13 (ENSCCRG00000010318)	ENSCCRG00000027541	ENSCCRG00000069995	ENSCCRG00000010333 #19	ENSCCRG00000066283	mief1 (ENSCCRG00000050462) #20	ENSCCRG00000068402 #21	ENSCCRG00000061903 #21	mpst (ENSCCRG00000054736)	ENSCCRG00000010340 #22	il2rb (ENSCCRG00000060467) #23	ENSCCRG00000079701	mgat3a (ENSCCRG00000058699)	ddx5 (ENSCCRG00000004157)	smurf2 (ENSCCRG00000004233)	ENSCCRG00000004214	ENSCCRG00000012690	grb2b (ENSCCRG00000054207)	ENSCCRG00000022532	ENSCCRG00000060557	ntn1b (ENSCCRG00000033537)	ENSCCRG00000071168	ENSCCRG00000041653	ENSCCRG00000053479	mfsd6l (ENSCCRG00000000939)
Cyprininae	ANCESTRAL SPECIES																	ENSGT00550000075088.a.b.b.b #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00550000075088.a.b.b.b #22
Golden-line barbel	MODERN SPECIES	4683																ENSSGRG00000003765 #22
Clupeiformes	ANCESTRAL SPECIES	29	ENSGT00940000161265.e.a #8	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000154405.a.a	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.a #12	ENSGT00510000048963	ENSGT00940000157367.a.a #15	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C #16	ENSGT00940000162556.D.a	ENSGT00530000063801.a.b #18	ENSGT00940000155733.a.b #19	ENSGT00390000013127.a #20	ENSGT00950000183045.A.b	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b.b #22	ENSGT00510000049239.a.c #23	ENSGT00940000160396	ENSGT00390000008221.b	ENSGT00950000182935.B.b.c #25	ENSGT00870000136549	ENSGT01050000244893.c.a.b.h	ENSGT00950000183184.b.b #26	ENSGT00940000160724 #27	ENSGT00940000176123	ENSGT00940000158410.g.a.a #30	ENSGT00950000182950.C #31	ENSGT00530000063688.b.nb.b #32	ENSGT00940000155494.j #33	ENSGT01030000234570.d.b.a.b.b.a.a #34	ENSGT01100000263847
Atlantic herring	MODERN SPECIES		grnb (ENSCHAG00000000066)	ENSCHAG00000000059	ENSCHAG00000000058	ENSCHAG00000000056	ENSCHAG00000000054	ENSCHAG00000000052	ENSCHAG00000020401	ENSCHAG00000020328	ENSCHAG00000020311	ENSCHAG00000020301	atf4b (ENSCHAG00000020262) #18	ENSCHAG00000020086 #19	mief1 (ENSCHAG00000020061) #20	ENSCHAG00000020029	mpst (ENSCHAG00000020020)	ENSCHAG00000019990 #22	il2rb (ENSCHAG00000019958) #23	C1QTNF6 (ENSCHAG00000019948)	mgat3a (ENSCHAG00000019944)	syngr1a (ENSCHAG00000019932) #25	FAM171A2 (ENSCHAG00000019910) #26	itga2b (ENSCHAG00000019890) #27	ENSCHAG00000019853	CRHR1 (ENSCHAG00000018889) #30	ENSCHAG00000018817	cdc27 (ENSCHAG00000018759) #31	KANSL1 (ENSCHAG00000018750) #32	ENSCHAG00000018694 #33	myl4 (ENSCHAG00000018674) #34	ENSCHAG00000018663	SCN4A (ENSCHAG00000017312) #35
Osteoglossiformes	ANCESTRAL SPECIES	242	ENSGT00940000166738	ENSGT00950000182951.A.a.b #7	ENSGT01060000248591.a.a.a.b.a #10	ENSGT00940000153560.b.b.b.g #13	ENSGT00940000159653.g.b.a ##12	ENSGT00510000048963	ENSGT00940000157367.a.b.g ##15	ENSGT00950000183122.C #16	ENSGT00530000063801.a.a.a ##18	ENSGT01030000234599.a.b.d.b.b	ENSGT00940000155733.a.b.g #19	ENSGT00390000013127.a #20	ENSGT01030000234887	ENSGT00740000115744 #21	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b #22	ENSGT00510000049239.a.a #23	ENSGT00940000167614.g #24	ENSGT00390000008221.b	ENSGT00510000048276	ENSGT00950000182935.B.b.c.d #25	ENSGT00390000017606.a.a	ENSGT01100000264550
Asian bonytongue	MODERN SPECIES	18	ENSSFOG00015008773 #7	ENSSFOG00015004601 #10	CBX6 (ENSSFOG00015008724)	ENSSFOG00015008644 #13	PVALB (ENSSFOG00015008610) ##12	ENSSFOG00015008575	ENSSFOG00015008563 ##15	adsl (ENSSFOG00015008511) #16	ATF4 (ENSSFOG00015008457) ##18	ENSSFOG00015030933	ENSSFOG00015008398	ENSSFOG00015025795 #19	mief1 (ENSSFOG00015008360) #20	ENSSFOG00015030824	mpst (ENSSFOG00015023768)	ube2ib (ENSSFOG00015008323) #22	il2rb (ENSSFOG00015028907) #23	ENSSFOG00015033272 #24	MGAT3 (ENSSFOG00015027975)	TAB1 (ENSSFOG00015008222)	SYNGR1 (ENSSFOG00015026828) #25	ENSSFOG00015029338	rpl3 (ENSSFOG00015008083)	CACNG2 (ENSSFOG00015023795)	ENSSFOG00015008062	ENSSFOG00015030653	ENSSFOG00015032451	ENSSFOG00015030597	ENSSFOG00015010168	rac2 (ENSSFOG00015010142)	ENSSFOG00015010123