Vertebrata DUPLICATION Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00550000075088.a.a #22 Gnathostomata ANCESTRAL SPECIES ENSGT00550000075088.a.a #22 Euteleostomi ANCESTRAL SPECIES 284 ENSGT00510000048783 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT01100000263504.a.b.a.b.a.a ENSGT00510000049652 ENSGT00390000006068 ENSGT00390000017838 ENSGT00940000154307.B #25 ENSGT01030000234518.B.b Actinopterygii ANCESTRAL SPECIES 162 ENSGT00390000012918.d #12 ENSGT00390000009759 ENSGT00940000159613 ENSGT00510000049182 ENSGT00390000009084 #14 ENSGT00940000158074 #15 ENSGT00940000161466 #16 ENSGT00940000160498 #17 ENSGT00940000156355.n.a #18 ENSGT00940000160352 ENSGT00940000160893 ENSGT00390000001260 ENSGT00510000048783.a ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT01100000263504.a.b.a.b.a.a ENSGT00510000049652 ENSGT00390000006068 ENSGT00390000017838 ENSGT00940000154307.B #25 ENSGT01030000234518.B.b Neopterygii ANCESTRAL SPECIES 103 ENSGT00950000182957.b.a.b.a.b ENSGT00390000012857 #7 ENSGT00390000012918.d #12 ENSGT00390000009759 ENSGT00940000159613 ENSGT00530000069547 #13 ENSGT00390000009084 #14 ENSGT00940000158074 #15 ENSGT00940000161466 #16 ENSGT00940000160498 #17 ENSGT00940000156355.n.a #18 ENSGT00390000001260 ENSGT00510000048783.a ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT01100000263504.a.b.b.a.b ENSGT00510000049652 ENSGT00390000006068 ENSGT00390000017838 ENSGT00940000154307.B #25 ENSGT01030000234518.B.b ENSGT00390000000306 ENSGT00940000156610 ENSGT00940000160824 #28 ENSGT00940000159396 ENSGT00530000064671 Osteoglossocephalai ANCESTRAL SPECIES 444 ENSGT00940000167095.B ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT01100000265049 Clupeocephala ANCESTRAL SPECIES 6 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.b ENSGT00940000161634 ENSGT01100000263504.a.b.b.a.b ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00390000001260 ENSGT00510000049239.b.b #19 ENSGT00940000167095.B ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT01060000248742 #24 ENSGT00940000154307.B #25 ENSGT00940000154307.A ##25 ENSGT00510000049652 ENSGT01100000263504.a.b.a.a ENSGT00940000158822 #27 ENSGT00940000160824 #28 ENSGT00940000163663.B.a #29 ENSGT00950000182979.a.b.b.b.b.i.a #30 ENSGT00940000163474 ENSGT00390000002628 ENSGT00550000075071 #32 ENSGT00940000157696 #31 ENSGT00390000008825.a #33 Euteleosteomorpha ANCESTRAL SPECIES 62 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT01060000248742 #24 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000177683 ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES 5 ENSGT00390000018542.b ENSGT00390000009447 ENSGT00940000155366.a ENSGT00390000001653 ENSGT00950000182957.b.a.b.a.b ENSGT00390000012857 #7 ENSGT00390000012918.d #12 ENSGT00530000069547 #13 ENSGT00390000009084 #14 ENSGT00940000158074 #15 ENSGT00940000161466 #16 ENSGT00940000160498.c #17 ENSGT00940000156355.n.a #18 ENSGT00510000049239.b.b #19 ENSGT00940000167095.B ENSGT00550000075088.a.a.f #22 ENSGT00730000110939.a #23 ENSGT01060000248742 #24 ENSGT00940000154307.B #25 ENSGT00940000154741.c #26 ENSGT00940000158822 #27 ENSGT00940000160824 #28 ENSGT00940000163663.B.a #29 ENSGT00950000182979.a.b.b.b.b.i.a #30 ENSGT01100000263632 ENSGT00390000002628 ENSGT00550000075071 #32 ENSGT00940000157696 #31 ENSGT00390000008825.a #33 ENSGT00390000009925.a #34 ENSGT00940000164514.a #35 Salmoninae ANCESTRAL SPECIES 183 ENSGT00940000156355.n.a.d #18 ENSGT00510000049239.b.b.c #19 ENSGT00940000167095.B ENSGT00940000155267.z.b ##20 ENSGT00940000160374.q.b.a ##21 ENSGT00530000069547.j ##13 ENSGT00390000009084.d ##14 ENSGT00940000158074.i.a ##15 ENSGT00940000161466.d ##16 ENSGT00940000160498.c.a.b ##17 ENSGT00940000160498.c.b ##17 ENSGT00940000156355.n.a.c ##18 ENSGT00510000049239.b.b.d ##19 ENSGT00940000155267.z.a #20 ENSGT00940000160374.q.b.b #21 ENSGT00550000075088.a.a.f #22 ENSGT00730000110939.a.f #23 ENSGT01060000248742 #24 ENSGT00940000154307.B.c.a.a.a ##25 ENSGT00940000154307.B.c.b #25 ENSGT00940000154741.c.d #26 ENSGT00940000158822.e #27 ENSGT00940000160824.d #28 ENSGT00940000163663.B.a.d #29 ENSGT00950000182979.a.b.b.b.b.i.a.f #30 Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES 124 ENSGT00940000157803.db.b.a ENSGT00390000018542.b.ab ENSGT00390000001653.p ENSGT00390000012857.v #7 ENSGT00390000012918.d.i #12 ENSGT00530000069547.i #13 ENSGT00390000009084.c #14 ENSGT00940000158074.i.b #15 ENSGT00940000161466.c #16 ENSGT00940000160498.c.b ##17 ENSGT00940000156355.n.a.d #18 ENSGT00510000049239.b.b.c #19 ENSGT00940000167095.B.a ENSGT00940000155267.z.a #20 ENSGT00940000160374.q.b.b #21 ENSGT00550000075088.a.a.f.b #22 ENSGT00730000110939.a.f #23 ENSGT01060000248742.d #24 ENSGT00940000154307.B.c.a.a.a ##25 ENSGT00940000154741.c.d #26 ENSGT00940000158822.e #27 ENSGT00940000160824.d #28 ENSGT00940000163663.B.a.d #29 ENSGT00950000182979.a.b.b.b.b.i.a.f #30 Salmo ANCESTRAL SPECIES 55 ENSGT00390000009447.p ENSGT00390000001653.p ENSGT00390000012857.v #7 ENSGT00390000012918.d.i #12 ENSGT00530000069547.i #13 ENSGT00390000009084.c #14 ENSGT00940000158074.i.b #15 ENSGT00940000161466.c #16 ENSGT00940000160498.c.a.a #17 ENSGT00940000156355.n.a.d #18 ENSGT00510000049239.b.b.c #19 ENSGT00940000167095.B.a ENSGT00940000155267.z.a #20 ENSGT00940000160374.q.b.b #21 ENSGT00940000160374.q.b.a ##21 ENSGT00550000075088.a.a.f.b #22 ENSGT00730000110939.a.f #23 ENSGT01060000248742.d #24 ENSGT00940000154307.B.c.b #25 ENSGT00940000154741.c.d #26 ENSGT00940000158822.e #27 ENSGT00940000160824.d #28 ENSGT00940000163663.B.a.d #29 ENSGT00950000182979.a.b.b.b.b.i.a.f #30 ENSGT01100000263632 ENSGT00390000002628.t.b ENSGT00550000075071.t ##32 ENSGT00940000157696.p.a #31 ENSGT00390000008825.a.c.b.a #33 Atlantic salmon MODERN SPECIES 22 ubfd1 (ENSSSAG00000055713) #7 ENSSSAG00000114813 #8 NSE1 (ENSSSAG00000104983) #9 ENSSSAG00000040597 #10 kdm8 (ENSSSAG00000118463) #11 ENSSSAG00000107346 #12 ENSSSAG00000098046 #13 nsmce1 (ENSSSAG00000040762) #14 kdm8 (ENSSSAG00000107176) #15 hs3st4 (ENSSSAG00000092849) #16 hs3st2 (ENSSSAG00000040873) #17 ENSSSAG00000040903 #18 il21r.1 (ENSSSAG00000041003) #19 ENSSSAG00000091048 #20 kctd5a (ENSSSAG00000099179) #21 UBC9B (ENSSSAG00000041047) #22 ENSSSAG00000091900 #23 gpr146 (ENSSSAG00000097402) #24 gper1 (ENSSSAG00000114707) #25 ENSSSAG00000041494 #26 ENSSSAG00000059518 #27 ENSSSAG00000114797 #28 shisa9b (ENSSSAG00000118252) #29 ENSSSAG00000061058 #30 ENSSSAG00000086275 #31 polr3k (ENSSSAG00000061173) #32 ubald1b (ENSSSAG00000061233) #33 mgrn1b (ENSSSAG00000061316) #34 ENSSSAG00000063759 #35 aanat2 (ENSSSAG00000045980) #36 rhbdf1a (ENSSSAG00000063779) #37 River trout MODERN SPECIES 25 zc3h7a (ENSSTUG00000010118) ENSSTUG00000010211 ubfd1 (ENSSTUG00000010223) #7 ENSSTUG00000010254 #12 ENSSTUG00000010350 #13 nsmce1 (ENSSTUG00000010490) #14 kdm8 (ENSSTUG00000010523) #15 ENSSTUG00000010540 hs3st4 (ENSSTUG00000010545) #16 hs3st2 (ENSSTUG00000010558) #17 USP31 (ENSSTUG00000010588) #18 il21r.1 (ENSSTUG00000010653) #19 ENSSTUG00000010661 pdpk1a (ENSSTUG00000010704) #20 kctd5a (ENSSTUG00000011266) ##21 ube2ia (ENSSTUG00000011285) #22 BAIAP3 (ENSSTUG00000011300) #23 gpr146 (ENSSTUG00000011336) #24 gper1 (ENSSTUG00000011340) #25 MYOF (ENSSTUG00000011380) #26 UNKL (ENSSTUG00000011824) #27 IGFALS (ENSSTUG00000012083) #28 shisa9b (ENSSTUG00000012086) #29 MRTFB (ENSSTUG00000012093) #30 ENSSTUG00000012142 snrnp25 (ENSSTUG00000012150) polr3k (ENSSTUG00000012159) ##32 cdip1 (ENSSTUG00000012173) #31 ubald1b (ENSSTUG00000012187) #33 mgrn1b (ENSSTUG00000012204) ##34 ENSSTUG00000012263 #35 Oncorhynchus ANCESTRAL SPECIES 33 ENSGT00390000001653.p ENSGT00950000182957.b.a.b.a.b.y.b ENSGT00390000012857.v #7 ENSGT00390000012918.d.i #12 ENSGT00530000069547.i #13 ENSGT00940000158074.i.b.c #15 ENSGT00390000009084.c #14 ENSGT00940000158074.i.b.d #15 ENSGT00940000161466.c #16 ENSGT00940000160498.c.b.a ##17 ENSGT00940000156355.n.a.d #18 ENSGT00510000049239.b.b.c #19 ENSGT00940000167095.B.a ENSGT00940000155267.z.a #20 ENSGT00940000160374.q.b.b #21 ENSGT00550000075088.a.a.f.b #22 ENSGT00730000110939.a.f #23 ENSGT01060000248742.d #24 ENSGT00940000154307.B.c.a.a.a ##25 ENSGT00940000154741.c.d #26 ENSGT00940000158822.e #27 ENSGT00940000160824.d #28 ENSGT00940000163663.B.a.d #29 ENSGT00950000182979.a.b.b.b.b.i.a.f #30 ENSGT01100000263632.d ENSGT00390000002628.t ENSGT00550000075071.s.a #32 ENSGT00940000157696.p #31 ENSGT00390000008825.a.c.b.a #33 ENSGT00390000009925.a.j.a ##34 ENSGT00940000164514.a.d.b.b #35 Oncorhynchus_a ANCESTRAL SPECIES 58 ENSGT00390000001653.p ENSGT00950000182957.b.a.b.a.b.y.b ENSGT00390000012857.v #7 ENSGT00390000012918.d.i #12 ENSGT00530000069547.i #13 ENSGT00940000158074.i.b.c #15 ENSGT00390000009084.c #14 ENSGT00940000158074.i.b.d #15 ENSGT00940000161466.c #16 ENSGT00940000160498.c.b.a ##17 ENSGT00940000156355.n.a.d #18 ENSGT00510000049239.b.b.c #19 ENSGT00940000167095.B.a ENSGT00940000155267.z.a #20 ENSGT00940000160374.q.b.b #21 ENSGT00550000075088.a.a.f.b #22 ENSGT00730000110939.a.f #23 ENSGT01060000248742.d #24 ENSGT00940000154307.B.c.a.a.a ##25 ENSGT00940000154741.c.d #26 ENSGT00940000158822.e #27 ENSGT00940000160824.d #28 ENSGT00940000163663.B.a.d #29 ENSGT00950000182979.a.b.b.b.b.i.a.f #30 ENSGT01100000263632.d ENSGT00390000002628.t ENSGT00550000075071.s.a #32 ENSGT00940000157696.p #31 ENSGT00390000008825.a.c.b.a #33 ENSGT00390000009925.a.j.a ##34 ENSGT00940000164514.a.d.b.b #35 Chinook salmon MODERN SPECIES 19 zc3h7a (ENSOTSG00005030567) snn (ENSOTSG00005030573) ENSOTSG00005030574 ubfd1 (ENSOTSG00005030575) #7 ENSOTSG00005030579 #12 ENSOTSG00005030619 #13 kdm8 (ENSOTSG00005030628) #15 nsmce1 (ENSOTSG00005030629) #14 kdm8 (ENSOTSG00005030631) #15 hs3st4 (ENSOTSG00005030635) #16 hs3st2 (ENSOTSG00005030637) ##17 USP31 (ENSOTSG00005030638) #18 ENSOTSG00005030640 pdpk1a (ENSOTSG00005030651) #20 kctd5a (ENSOTSG00005030680) #21 ube2ia (ENSOTSG00005030681) #22 BAIAP3 (ENSOTSG00005030688) #23 gpr146 (ENSOTSG00005030692) ##24 gper1 (ENSOTSG00005030693) ##25 MYOF (ENSOTSG00005030704) ##26 UNKL (ENSOTSG00005031700) ##27 ENSOTSG00005031849 shisa9b (ENSOTSG00005031856) ##29 ENSOTSG00005031858 ##30 ENSOTSG00005031860 snrnp25 (ENSOTSG00005031861) polr3k (ENSOTSG00005031862) #32 cdip1 (ENSOTSG00005031863) ##31 ENSOTSG00005031864 ##33 ENSOTSG00005031865 #37 mpg (ENSOTSG00005031867) Rainbow trout MODERN SPECIES 3 pla2g10 (ENSOMYG00000014469) zc3h7a (ENSOMYG00000014520) ENSOMYG00000015379 ubfd1 (ENSOMYG00000015390) #7 ENSOMYG00000015398 #12 ENSOMYG00000052831 ENSOMYG00000015453 #13 kdm8 (ENSOMYG00000003193) #15 nsmce1 (ENSOMYG00000015414) #14 ENSOMYG00000003332 hs3st4 (ENSOMYG00000003349) #16 hs3st2 (ENSOMYG00000003365) ##17 ENSOMYG00000003597 #19 ENSOMYG00000004238 #20 ENSOMYG00000004697 ##21 ube2ia (ENSOMYG00000004738) #22 ENSOMYG00000004792 #23 gpr146 (ENSOMYG00000004833) #24 gper1 (ENSOMYG00000004849) ##25 ENSOMYG00000063247 ENSOMYG00000009738 #26 ENSOMYG00000022728 ENSOMYG00000022799 #27 ENSOMYG00000022878 #28 shisa9b (ENSOMYG00000022884) #29 ENSOMYG00000020852 #30 snrnp25 (ENSOMYG00000020817) polr3k (ENSOMYG00000073888) ##32 cdip1 (ENSOMYG00000072290) #31 ENSOMYG00000068786 ubald1b (ENSOMYG00000020767) #33 Salmoninae_a ANCESTRAL SPECIES 99 ENSGT00940000155366.a ENSGT00390000001653.o ENSGT00950000182957.b.a.b.a.b ENSGT00390000012857.u ##7 ENSGT00390000012918.d.j ##12 ENSGT00530000069547.j ##13 ENSGT00390000009084.d ##14 ENSGT00940000158074.i.a ##15 ENSGT00940000161466.d ##16 ENSGT00940000160498.c.a.b ##17 ENSGT00940000156355.n.a.c ##18 ENSGT00510000049239.b.b.d ##19 ENSGT00940000167095.B.b ENSGT00940000155267.z.b ##20 ENSGT00940000160374.q.b.a ##21 ENSGT00550000075088.a.a.f.a ##22 ENSGT00730000110939.a.e ##23 ENSGT01060000248742.c ##24 ENSGT00940000154307.B.c.a.a.b ##25 ENSGT00940000154741.c.c ##26 ENSGT00940000158822.f ##27 ENSGT00940000160824.c ##28 ENSGT00940000163663.B.a.c ##29 ENSGT00950000182979.a.b.b.b.b.i.a.e ##30 ENSGT01100000263632 ENSGT00390000002628.t ENSGT00550000075071.t ##32 ENSGT00940000157696.o ##31 ENSGT00390000008825.a.c.b.b ##33 ENSGT00390000009925.a.i #34 ENSGT00940000164514.a.d.a ##35 Salmo ANCESTRAL SPECIES 28 ENSGT00390000009447.o ENSGT00940000155366.a ENSGT00950000182957.b.a.b.a.a.d.b ENSGT00390000001653.o ENSGT00950000182957.b.a.b.a.b ENSGT00390000012857.u ##7 ENSGT00390000012918.d.j ##12 ENSGT00530000069547.j ##13 ENSGT00390000009084.d ##14 ENSGT00940000158074.i.a ##15 ENSGT00940000161466.d ##16 ENSGT00940000160498.c.a.b ##17 ENSGT00940000156355.n.a.c ##18 ENSGT00510000049239.b.b.d ##19 ENSGT00940000155267.z.b ##20 ENSGT00550000075088.a.a.f.a ##22 ENSGT00730000110939.a.e ##23 ENSGT01060000248742.c ##24 ENSGT00940000154307.B.d ##25 ENSGT00940000154741.c.c ##26 ENSGT00940000158822.f ##27 ENSGT00940000160824.c ##28 ENSGT00940000163663.B.a.c ##29 ENSGT00950000182979.a.b.b.b.b.i.a.e ##30 ENSGT00390000002628.t.a ENSGT00550000075071.s #32 ENSGT00940000157696.p.b ##31 ENSGT00390000008825.a.d ##33 ENSGT00390000009925.a.j ##34 ENSGT00390000008825.a.c.b.b ##33 ENSGT00390000009925.a.i #34 River trout MODERN SPECIES snn (ENSSTUG00000024979) litaf (ENSSTUG00000024987) RMI2 (ENSSTUG00000024998) ENSSTUG00000000178 ubfd1 (ENSSTUG00000000193) ##7 ENSSTUG00000000209 ##12 ENSSTUG00000000224 ##13 nsmce1 (ENSSTUG00000000234) ##14 kdm8 (ENSSTUG00000000243) ##15 hs3st4 (ENSSTUG00000000245) ##16 hs3st2 (ENSSTUG00000000248) ##17 USP31 (ENSSTUG00000000253) ##18 il21r.1 (ENSSTUG00000000262) ##19 pdpk1a (ENSSTUG00000000266) ##20 kctd5a (ENSSTUG00000000278) #21 ube2ia (ENSSTUG00000000287) ##22 BAIAP3 (ENSSTUG00000000295) ##23 ENSSTUG00000000303 gpr146 (ENSSTUG00000000305) ##24 gper1 (ENSSTUG00000000307) ##25 MYOF (ENSSTUG00000000331) ##26 ENSSTUG00000000465 ##27 IGFALS (ENSSTUG00000000512) ##28 ENSSTUG00000000514 shisa9b (ENSSTUG00000000517) ##29 ENSSTUG00000000520 ##30 snrnp25 (ENSSTUG00000000545) polr3k (ENSSTUG00000000551) #32 cdip1 (ENSSTUG00000000559) ##31 ubald1b (ENSSTUG00000000565) ##33 mgrn1b (ENSSTUG00000000633) #34 Atlantic salmon MODERN SPECIES 25 pla2g10 (ENSSSAG00000056156) zc3h7a (ENSSSAG00000055808) snn (ENSSSAG00000101014) litaf (ENSSSAG00000055786) ENSSSAG00000055736 ubfd1 (ENSSSAG00000040312) ##7 ENSSSAG00000087718 ##12 nsmce1 (ENSSSAG00000055666) ##14 ENSSSAG00000055682 ##13 kdm8 (ENSSSAG00000055647) ##15 hs3st4 (ENSSSAG00000091807) ##16 hs3st2 (ENSSSAG00000055637) ##17 ENSSSAG00000096101 ##18 ENSSSAG00000055593 ##19 ENSSSAG00000055541 ##20 UBC9B (ENSSSAG00000055512) ##22 ENSSSAG00000082220 ##23 gpr146 (ENSSSAG00000096111) ##24 gper1 (ENSSSAG00000098367) ##25 ENSSSAG00000046935 ##26 ENSSSAG00000046204 ##27 ENSSSAG00000117969 ##28 shisa9b (ENSSSAG00000046166) ##29 ENSSSAG00000046151 ##30 cp033 (ENSSSAG00000046131) polr3k (ENSSSAG00000046113) ##32 cdip1 (ENSSSAG00000099369) ##31 f100a (ENSSSAG00000046095) ##33 mgrn1b (ENSSSAG00000046020) ##34 ENSSSAG00000121236 ##35 aanat2 (ENSSSAG00000085086) ##36 Oncorhynchus ANCESTRAL SPECIES 48 ENSGT00390000001653.o ENSGT00950000182957.b.a.b.a.b.y.a ENSGT00390000012857.u ##7 ENSGT00390000012918.d.j ##12 ENSGT00530000069547.j ##13 ENSGT00390000009084.d ##14 ENSGT00940000158074.i.a ##15 ENSGT01000000220623 ENSGT00940000161466.d ##16 ENSGT00940000160498.c.b.b ##17 ENSGT00940000156355.n.a.c ##18 ENSGT00510000049239.b.b.d ##19 ENSGT00940000167095.B.b ENSGT00940000155267.z.b ##20 ENSGT00940000160374.q.b.a ##21 ENSGT00550000075088.a.a.f.a ##22 ENSGT00730000110939.a.e ##23 ENSGT01060000248742.c ##24 ENSGT00940000154307.B.c.a.a.b ##25 ENSGT00940000154741.c.c ##26 ENSGT00940000158822.f ##27 ENSGT00940000160824.c ##28 ENSGT00940000163663.B.a.c ##29 ENSGT00950000182979.a.b.b.b.b.i.a.e ##30 ENSGT01100000263632.c ENSGT00390000002628.s ENSGT00550000075071.s.b #32 ENSGT00940000157696.o ##31 ENSGT00390000008825.a.c.b.b ##33 ENSGT00390000009925.a.i #34 ENSGT00390000009925.a.j.b ##34 Oncorhynchus_a ANCESTRAL SPECIES 42 ENSGT00390000001653.o ENSGT00950000182957.b.a.b.a.b.y.a ENSGT00390000012857.u ##7 ENSGT00390000012918.d.j ##12 ENSGT00530000069547.j ##13 ENSGT00390000009084.d ##14 ENSGT00940000158074.i.a ##15 ENSGT01000000220623 ENSGT00940000161466.d ##16 ENSGT00940000160498.c.b.b ##17 ENSGT00940000156355.n.a.c ##18 ENSGT00510000049239.b.b.d ##19 ENSGT00940000167095.B.b ENSGT00940000155267.z.b ##20 ENSGT00940000160374.q.b.a ##21 ENSGT00550000075088.a.a.f.a ##22 ENSGT00730000110939.a.e ##23 ENSGT01060000248742.c ##24 ENSGT00940000154307.B.c.a.a.b ##25 ENSGT00940000154741.c.c ##26 ENSGT00940000158822.f ##27 ENSGT00940000160824.c ##28 ENSGT00940000163663.B.a.c ##29 ENSGT00950000182979.a.b.b.b.b.i.a.e ##30 ENSGT01100000263632.c ENSGT00390000002628.s ENSGT00550000075071.s.b #32 ENSGT00940000157696.o ##31 ENSGT00390000008825.a.c.b.b ##33 ENSGT00390000009925.a.i #34 ENSGT00390000009925.a.j.b ##34 Coho salmon DUPLICATION Coho salmon MODERN SPECIES 1 ubfd1 (ENSOKIG00005022263) ##7 ENSOKIG00005022296 ##12 ENSOKIG00005022310 ##13 nsmce1 (ENSOKIG00005022316) ##14 kdm8 (ENSOKIG00005022437) ##15 ENSOKIG00005022471 hs3st4 (ENSOKIG00005022474) ##16 ENSOKIG00005022481 ENSOKIG00005022489 hs3st2 (ENSOKIG00005022496) ##17 USP31 (ENSOKIG00005022518) ##18 il21r.1 (ENSOKIG00005022676) ##19 ENSOKIG00005022719 pdpk1a (ENSOKIG00005022818) ##20 kctd5a (ENSOKIG00005023131) ##21 ube2ia (ENSOKIG00005023157) ##22 BAIAP3 (ENSOKIG00005023218) ##23 gpr146 (ENSOKIG00005023250) ##24 gper1 (ENSOKIG00005023254) ##25 MYOF (ENSOKIG00005023425) ##26 ENSOKIG00005024442 ##27 IGFALS (ENSOKIG00005025057) ##28 shisa9b (ENSOKIG00005025062) ##29 ENSOKIG00005025074 ##30 ENSOKIG00005025096 snrnp25 (ENSOKIG00005025115) polr3k (ENSOKIG00005025142) ##32 cdip1 (ENSOKIG00005025193) ##31 ubald1b (ENSOKIG00005025204) ##33 mgrn1b (ENSOKIG00005025257) #34 ENSOKIG00005025430 ##35 Coho salmon MODERN SPECIES 26 ENSOKIG00005015134 ENSOKIG00005015137 ubfd1 (ENSOKIG00005015166) #7 ENSOKIG00005015189 #12 ENSOKIG00005015303 #13 kdm8 (ENSOKIG00005015414) #15 kdm8 (ENSOKIG00005015402) #15 nsmce1 (ENSOKIG00005015431) #14 hs3st4 (ENSOKIG00005015458) #16 hs3st2 (ENSOKIG00005015464) ##17 USP31 (ENSOKIG00005015477) #18 il21r.1 (ENSOKIG00005015520) #19 ENSOKIG00005015527 pdpk1a (ENSOKIG00005015549) #20 kctd5a (ENSOKIG00005015718) #21 ube2ia (ENSOKIG00005015749) ##22 gpr146 (ENSOKIG00005015795) #24 gper1 (ENSOKIG00005015801) ##25 MYOF (ENSOKIG00005016084) #26 UNKL (ENSOKIG00005020338) #27 IGFALS (ENSOKIG00005020667) #28 shisa9b (ENSOKIG00005020672) #29 MRTFB (ENSOKIG00005020681) #30 ENSOKIG00005020699 snrnp25 (ENSOKIG00005020709) polr3k (ENSOKIG00005020729) #32 cdip1 (ENSOKIG00005020759) #31 ubald1b (ENSOKIG00005020773) #33 mgrn1b (ENSOKIG00005020973) #34 ENSOKIG00005023385 #35 ENSOKIG00005023391 Chinook salmon MODERN SPECIES 2912 ubfd1 (ENSOTSG00005047734) ##7 ENSOTSG00005047732 ##12 ENSOTSG00005047729 ##13 ENSOTSG00005047727 nsmce1 (ENSOTSG00005047725) ##14 kdm8 (ENSOTSG00005047724) ##15 ENSOTSG00005047723 hs3st4 (ENSOTSG00005047722) ##16 hs3st2 (ENSOTSG00005047721) ##17 ENSOTSG00005047720 USP31 (ENSOTSG00005047718) ##18 il21r.1 (ENSOTSG00005047717) ##19 ENSOTSG00005047716 pdpk1a (ENSOTSG00005047658) ##20 kctd5a (ENSOTSG00005047656) ##21 ube2ia (ENSOTSG00005047655) ##22 gper1 (ENSOTSG00005047654) ##25 MYOF (ENSOTSG00005047636) #26 ENSOTSG00005047621 #27 IGFALS (ENSOTSG00005047618) #28 shisa9b (ENSOTSG00005047617) ##29 aanat2 (ENSOTSG00005047615) ##36 ENSOTSG00005047613 ##35 mgrn1b (ENSOTSG00005047608) ##34 Rainbow trout MODERN SPECIES 4 ENSOMYG00000016880 ubfd1 (ENSOMYG00000016909) ##7 ENSOMYG00000016924 ##12 il21r (ENSOMYG00000016944) ##13 nsmce1 (ENSOMYG00000016993) ##14 ENSOMYG00000073259 ##13 kdm8 (ENSOMYG00000017039) ##15 ENSOMYG00000068133 hs3st4 (ENSOMYG00000017082) ##16 hs3st2 (ENSOMYG00000019275) ##17 ENSOMYG00000031178 ##18 il21r.1 (ENSOMYG00000031220) ##19 ENSOMYG00000031232 pdpk1a (ENSOMYG00000031301) ##20 kctd5a (ENSOMYG00000031491) ##21 ube2ia (ENSOMYG00000031515) ##22 ENSOMYG00000031607 ##23 gpr146 (ENSOMYG00000031630) ##24 gper1 (ENSOMYG00000031641) ##25 ENSOMYG00000031850 ##26 ENSOMYG00000032087 ##27 ENSOMYG00000032152 ##28 ENSOMYG00000056491 shisa9b (ENSOMYG00000032161) ##29 ENSOMYG00000065281 ENSOMYG00000032174 ##30 ENSOMYG00000032185 snrnp25 (ENSOMYG00000032194) polr3k (ENSOMYG00000032201) #32 cdip1 (ENSOMYG00000032209) ##31 ubald1b (ENSOMYG00000064940) ##33 Huchen DUPLICATION Huchen MODERN SPECIES 199 SNN (ENSHHUG00000029449) litaf (ENSHHUG00000029452) ENSHHUG00000029458 ubfd1 (ENSHHUG00000029477) #7 ENSHHUG00000029495 #12 ENSHHUG00000029505 ##13 nsmce1 (ENSHHUG00000029520) ##14 kdm8 (ENSHHUG00000029727) ##15 ENSHHUG00000029735 hs3st4 (ENSHHUG00000029738) ##16 hs3st2 (ENSHHUG00000029742) ##17 USP31 (ENSHHUG00000029749) #18 il21r.1 (ENSHHUG00000029769) ##19 pdpk1a (ENSHHUG00000029770) #20 kctd5a (ENSHHUG00000029789) ##21 ube2ia (ENSHHUG00000029807) #22 BAIAP3 (ENSHHUG00000029930) #23 gpr146 (ENSHHUG00000029949) #24 gper1 (ENSHHUG00000029951) ##25 MYOF (ENSHHUG00000029964) #26 ENSHHUG00000030201 #27 UNKL (ENSHHUG00000030204) #27 IGFALS (ENSHHUG00000030206) ##28 ENSHHUG00000030208 shisa9b (ENSHHUG00000030211) #29 ENSHHUG00000030216 ##30 ENSHHUG00000030226 ##30 ENSHHUG00000030235 snrnp25 (ENSHHUG00000030238) polr3k (ENSHHUG00000030246) ##32 cdip1 (ENSHHUG00000030260) #31 Huchen MODERN SPECIES 2540 ENSHHUG00000051386 hs3st2 (ENSHHUG00000051384) #17 USP31 (ENSHHUG00000051375) ##18 il21r.1 (ENSHHUG00000051372) #19 ENSHHUG00000051368 pdpk1a (ENSHHUG00000051118) ##20 kctd5a (ENSHHUG00000051115) #21 UBE2I (ENSHHUG00000051112) #22 Protacanthopterygii ANCESTRAL SPECIES 54 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.b ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a.e ##22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.a.j ENSGT00940000163157.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 23 ENSGT00940000160651.a ENSGT00530000064671.c ENSGT00940000159396.e ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.b ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267.y.a ##20 ENSGT00940000160374.r ##21 ENSGT00940000160374.q.a.b.a ##21 ENSGT00550000075088.a.a.e.a ##22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a.g ENSGT00650000094874 ENSGT00940000164729.a.b.d ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d.e ENSGT00940000153561.b.a.b.a.b.b ENSGT00440000036191 ENSGT00940000159110.a.j.b ENSGT00940000163157.a.b Salmoninae_a ANCESTRAL SPECIES 17 ENSGT00810000125570.d ENSGT00940000160651.a ENSGT00530000064671.c ENSGT00940000159396.e ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.b ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267.y.a ##20 ENSGT00940000160374.r ##21 ENSGT00550000075088.a.a.e.a ##22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a.g ENSGT00650000094874 ENSGT00940000164729.a.b.d ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d.e ENSGT00940000153561.b.a.b.a.b.b ENSGT00440000036191 ENSGT00940000159110.a.j.b ENSGT00940000163157.a.b Salmo ANCESTRAL SPECIES 3 ENSGT00810000125570.d ENSGT00940000160651.a ENSGT00530000064671.c ENSGT00940000159396.e ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.b ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267.y.a ##20 ENSGT00940000160374.r ##21 ENSGT00550000075088.a.a.e.a ##22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a.g ENSGT00650000094874 ENSGT00940000164729.a.b.d ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d.e ENSGT00940000153561.b.a.b.a.b.b ENSGT00440000036191 ENSGT00940000159110.a.j.b ENSGT00940000163157.a.b Atlantic salmon MODERN SPECIES 10 ENSSSAG00000057029 rhot2 (ENSSSAG00000056933) rhbdl1 (ENSSSAG00000113580) zgc:112496 (ENSSSAG00000056904) wdr24 (ENSSSAG00000056892) anks3 (ENSSSAG00000056876) ENSSSAG00000113195 zgc:112185 (ENSSSAG00000056866) ENSSSAG00000056861 ##25 ENSSSAG00000056856 ENSSSAG00000056848 tsr3 (ENSSSAG00000056047) gnptg (ENSSSAG00000056057) ENSSSAG00000054521 ##20 ENSSSAG00000094096 ##21 UBC9 (ENSSSAG00000054459) ##22 ENSSSAG00000087751 ENSSSAG00000109970 ENSSSAG00000054440 ENSSSAG00000054338 rnf40 (ENSSSAG00000044074) ENSSSAG00000043853 ENSSSAG00000043840 znf668 (ENSSSAG00000074656) ENSSSAG00000100454 ENSSSAG00000074642 ENSSSAG00000106489 ENSSSAG00000074616 ENSSSAG00000072381 ENSSSAG00000054904 ENSSSAG00000072225 River trout MODERN SPECIES 11 h1-0 (ENSSTUG00000015855) rhbdl1 (ENSSTUG00000015839) zgc:112496 (ENSSTUG00000015834) wdr24 (ENSSTUG00000015807) anks3 (ENSSTUG00000015776) zgc:112185 (ENSSTUG00000015761) ENSSTUG00000015749 ENSSTUG00000015739 ENSSTUG00000015729 ##25 ENSSTUG00000015722 ENSSTUG00000015711 gnptg (ENSSTUG00000015462) tsr3 (ENSSTUG00000015423) pdpk1b (ENSSTUG00000014241) ##20 ENSSTUG00000014189 ##21 ENSSTUG00000014167 ##22 ENSSTUG00000014156 ENSSTUG00000014118 ccdc189 (ENSSTUG00000014100) phkg2 (ENSSTUG00000013973) RNF40 (ENSSTUG00000013764) ENSSTUG00000013714 ENSSTUG00000013702 znf668 (ENSSTUG00000013695) ENSSTUG00000013687 ENSSTUG00000013670 ENSSTUG00000013660 SHANK1 (ENSSTUG00000013631) ENSSTUG00000013609 SLC17A7 (ENSSTUG00000012911) slc6a16b (ENSSTUG00000012847) Oncorhynchus ANCESTRAL SPECIES 26 ENSGT00940000165798.c.b.b ENSGT00940000158109.a ENSGT00810000125570.d ENSGT00940000160651.a ENSGT00530000064671.c ENSGT00940000159396.e ENSGT00940000156610 ENSGT00390000000306 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267.y.a ##20 ENSGT00940000160374.r ##21 ENSGT00550000075088.a.a.e.a ##22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a.g ENSGT00650000094874 ENSGT00940000164729.a.b.d ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d.e ENSGT00940000153561.b.a.b.a.b.b ENSGT00940000153561.b.a.b.a.b.a ENSGT00440000036191 ENSGT00940000159110.a.j.b Rainbow trout MODERN SPECIES 7 rhbdl1 (ENSOMYG00000022108) zgc:112496 (ENSOMYG00000022093) wdr24 (ENSOMYG00000022079) anks3 (ENSOMYG00000022056) zgc:112185 (ENSOMYG00000022031) ENSOMYG00000022020 ENSOMYG00000021994 ENSOMYG00000021989 ##25 ENSOMYG00000021984 ENSOMYG00000021977 gnptg (ENSOMYG00000021941) ENSOMYG00000021906 pdpk1b (ENSOMYG00000021496) ##20 ENSOMYG00000060338 ENSOMYG00000021266 ##21 ENSOMYG00000021232 ##22 ENSOMYG00000021201 ENSOMYG00000069768 ENSOMYG00000021189 ENSOMYG00000021180 ENSOMYG00000021160 ENSOMYG00000020934 ENSOMYG00000020791 znf668 (ENSOMYG00000020784) ENSOMYG00000020774 ENSOMYG00000020743 ENSOMYG00000020717 ENSOMYG00000020704 ENSOMYG00000020698 ENSOMYG00000020688 ENSOMYG00000020630 Oncorhynchus_a ANCESTRAL SPECIES 21 ENSGT00810000125570.d ENSGT00940000160651.a ENSGT00530000064671.c ENSGT00940000159396.e ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.b.a.b.tb ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267.y.a ##20 ENSGT00940000160374.r ##21 ENSGT00550000075088.a.a.e.a ##22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a.g ENSGT00650000094874 ENSGT00940000164729.a.b.d ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d.e ENSGT00940000153561.b.a.b.a.b.a ENSGT00440000036191 ENSGT00940000159110.a.j.b ENSGT00940000163157.a.b Coho salmon MODERN SPECIES 12 h1-0 (ENSOKIG00005024496) rhbdl1 (ENSOKIG00005024483) zgc:112496 (ENSOKIG00005024474) wdr24 (ENSOKIG00005024459) anks3 (ENSOKIG00005024434) zgc:112185 (ENSOKIG00005024417) ENSOKIG00005024408 ENSOKIG00005024398 ENSOKIG00005024356 ##25 ENSOKIG00005024350 ENSOKIG00005024343 gnptg (ENSOKIG00005023902) tsr3 (ENSOKIG00005023859) pdpk1b (ENSOKIG00005022926) ##20 ENSOKIG00005022745 ##21 ENSOKIG00005022558 ##22 ENSOKIG00005022524 ENSOKIG00005022315 ccdc189 (ENSOKIG00005022260) phkg2 (ENSOKIG00005021806) RNF40 (ENSOKIG00005021406) ENSOKIG00005021346 ENSOKIG00005021333 znf668 (ENSOKIG00005021326) ENSOKIG00005021320 ENSOKIG00005021307 ENSOKIG00005021303 ENSOKIG00005021272 ENSOKIG00005021264 SLC17A7 (ENSOKIG00005020626) ENSOKIG00005020606 Chinook salmon MODERN SPECIES 16 h1-0 (ENSOTSG00005006688) rhbdl1 (ENSOTSG00005006686) zgc:112496 (ENSOTSG00005006683) wdr24 (ENSOTSG00005006681) anks3 (ENSOTSG00005006680) zgc:112185 (ENSOTSG00005006678) ENSOTSG00005006677 UQCC4 (ENSOTSG00005006676) ENSOTSG00005006672 ##25 ENSOTSG00005006671 ENSOTSG00005006670 gnptg (ENSOTSG00005005572) tsr3 (ENSOTSG00005005560) pdpk1b (ENSOTSG00005005023) ##20 ENSOTSG00005005016 ##21 ENSOTSG00005005013 ##22 ENSOTSG00005004998 ENSOTSG00005004994 ccdc189 (ENSOTSG00005004989) phkg2 (ENSOTSG00005004668) RNF40 (ENSOTSG00005004216) ENSOTSG00005004184 ENSOTSG00005004180 znf668 (ENSOTSG00005004177) ENSOTSG00005004171 zgc:91999 (ENSOTSG00005004164) ENSOTSG00005004162 ENSOTSG00005004160 SLC17A7 (ENSOTSG00005003621) slc6a16b (ENSOTSG00005003010) ENSOTSG00005002998 Huchen MODERN SPECIES 15 h1-0 (ENSHHUG00000043049) rhbdl1 (ENSHHUG00000043045) zgc:112496 (ENSHHUG00000043040) wdr24 (ENSHHUG00000043032) anks3 (ENSHHUG00000043030) zgc:112185 (ENSHHUG00000043027) ENSHHUG00000042963 ENSHHUG00000042962 ENSHHUG00000042961 ##25 ENSHHUG00000042960 C7orf50 (ENSHHUG00000042959) gnptg (ENSHHUG00000042934) tsr3 (ENSHHUG00000042929) pdpk1b (ENSHHUG00000042909) ##20 ENSHHUG00000042901 ##21 ENSHHUG00000042807 ##22 ENSHHUG00000042801 ENSHHUG00000042790 ccdc189 (ENSHHUG00000042777) phkg2 (ENSHHUG00000042737) RNF40 (ENSHHUG00000042722) ENSHHUG00000042717 znf668 (ENSHHUG00000042710) ENSHHUG00000042704 ENSHHUG00000042689 ENSHHUG00000042678 ENSHHUG00000042673 ENSHHUG00000042668 SLC17A7 (ENSHHUG00000042363) slc6a16b (ENSHHUG00000042336) ENSHHUG00000042326 Salmoninae ANCESTRAL SPECIES 9 ENSGT00390000015528.a ENSGT00390000006698 ENSGT00440000033742.a.a.b ENSGT00940000153801.a.d ENSGT00940000154852.a.e ENSGT00530000066748.d ENSGT00940000158109.b ENSGT00810000125570.c ENSGT00940000160651.b ENSGT00530000064671.d ENSGT00940000159396.f ENSGT00990000214316 ENSGT01030000235280 ENSGT00940000155267.y.b ##20 ENSGT00940000160374.q.a.a ##21 ENSGT00550000075088.a.a.e.b ##22 ENSGT00390000002866.a.h ENSGT00940000164729.a.b.c Salmoninae_a ANCESTRAL SPECIES 86 ENSGT00390000015528.a ENSGT00390000006698 ENSGT00440000033742.a.a.b ENSGT00940000153801.a.d ENSGT00940000154852.a.e ENSGT00530000066748.d ENSGT00940000158109.b ENSGT00810000125570.c ENSGT00940000160651.b ENSGT00530000064671.d ENSGT00940000159396.f ENSGT00990000214316 ENSGT01030000235280 ENSGT00940000155267.y.b ##20 ENSGT00940000160374.q.a.a ##21 ENSGT00550000075088.a.a.e.b ##22 ENSGT00390000002866.a.h ENSGT00940000164729.a.b.c ENSGT00940000153561.b.a.b.a.b.a ENSGT00940000159110.a.j.a ENSGT00940000163157.a.a ENSGT00940000158125.a.g ENSGT00950000183213.a.a.b.c ENSGT00390000004566.f ENSGT00940000154944.x ENSGT00390000006695.m ENSGT01030000234586.A.a.a.a.d ENSGT00390000016438.jb.a ENSGT00940000164208.c ENSGT00940000163149.a.a.b.c.b.b ENSGT00940000165576.a.b.f.a.a Oncorhynchus ANCESTRAL SPECIES 178 ENSGT00530000064671.d ENSGT00940000159396.f ENSGT00990000214316 ENSGT00940000155267.y.b ##20 ENSGT00940000160374.q.a.a ##21 ENSGT00550000075088.a.a.e.b ##22 ENSGT00390000002866.a.h ENSGT00940000164729.a.b.c Rainbow trout MODERN SPECIES 12 ENSOMYG00000018747 kdelr2b (ENSOMYG00000018731) ENSOMYG00000018724 ENSOMYG00000018686 ENSOMYG00000018665 polr3e (ENSOMYG00000018552) h1-0 (ENSOMYG00000071351) ENSOMYG00000018518 ENSOMYG00000018493 wdr24 (ENSOMYG00000018447) ENSOMYG00000018427 ENSOMYG00000051420 ENSOMYG00000017047 ##20 ENSOMYG00000016958 ##21 ENSOMYG00000065629 ENSOMYG00000016895 ##22 ENSOMYG00000016612 ENSOMYG00000059562 ENSOMYG00000016579 ENSOMYG00000016572 ENSOMYG00000015597 ENSOMYG00000015441 ENSOMYG00000015427 ENSOMYG00000015376 dcun1d3 (ENSOMYG00000015352) lyrm1 (ENSOMYG00000015344) ENSOMYG00000015340 ENSOMYG00000015186 ENSOMYG00000015111 ENSOMYG00000061116 ENSOMYG00000015101 Oncorhynchus_a ANCESTRAL SPECIES 69 ENSGT00940000155510.u.a.b ENSGT00940000158142.f ENSGT00940000154018.a.a ENSGT00940000154852.a.e ENSGT00530000066748.d ENSGT00940000158109.b ENSGT00810000125570.c ENSGT00940000160651.b.b ENSGT01000000220396 ENSGT00940000160651.b.a ENSGT00530000064671.d ENSGT00940000159396.f ENSGT00990000214316 ENSGT00940000155267.y.b ##20 ENSGT00940000160374.q.a.a ##21 ENSGT00550000075088.a.a.e.b ##22 ENSGT00390000002866.a.h ENSGT00940000164729.a.b.c ENSGT00940000159110.a.j.a ENSGT00940000158125.a.g ENSGT00950000183213.a.a.b.c ENSGT00390000004566.f ENSGT00940000154944.x ENSGT00390000006695.m ENSGT01030000234586.A.a.a.a.d ENSGT00390000016438.jb.a ENSGT00940000164208.c ENSGT00940000163149.a.a.b.c.b.b ENSGT00940000165576.a.b.f.a.a ENSGT00940000160643.j.a ENSGT00940000155348.B.d.d Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 12 GZMK (ENSOTSG00005001687) rai14 (ENSOTSG00005001692) fgf10a (ENSOTSG00005001695) ENSOTSG00005001698 SBK1 (ENSOTSG00005001701) ENSOTSG00005001708 rhot2 (ENSOTSG00005001712) h1-0 (ENSOTSG00005001715) rhbdl1 (ENSOTSG00005001719) ENSOTSG00005001722 wdr24 (ENSOTSG00005001723) ENSOTSG00005001725 ENSOTSG00005001726 pdpk1b (ENSOTSG00005001740) ##20 ENSOTSG00005002200 ##21 ENSOTSG00005002201 ##22 RNF40 (ENSOTSG00005002237) ENSOTSG00005003434 SLC17A7 (ENSOTSG00005003460) ENSOTSG00005006124 luc7l (ENSOTSG00005006125) KATNIP (ENSOTSG00005006127) dcun1d3 (ENSOTSG00005006131) lyrm1 (ENSOTSG00005006134) ENSOTSG00005006136 med24 (ENSOTSG00005006149) ENSOTSG00005006499 sgsm3 (ENSOTSG00005006502) lgals2a (ENSOTSG00005006505) ENSOTSG00005006506 atp5mea (ENSOTSG00005006508) Chinook salmon MODERN SPECIES 17 chuk (ENSOTSG00005045341) ENSOTSG00005045009 ENSOTSG00005045005 ENSOTSG00005045004 ENSOTSG00005045003 SBK1 (ENSOTSG00005045002) ENSOTSG00005045001 h1-0 (ENSOTSG00005045000) rhbdl1 (ENSOTSG00005044999) ENSOTSG00005044998 wdr24 (ENSOTSG00005044997) ENSOTSG00005044996 ENSOTSG00005044995 pdpk1b (ENSOTSG00005044872) ##20 ENSOTSG00005044863 ##21 ENSOTSG00005044860 ##22 RNF40 (ENSOTSG00005044659) ENSOTSG00005044654 SLC17A7 (ENSOTSG00005044162) ENSOTSG00005044142 luc7l (ENSOTSG00005044141) KATNIP (ENSOTSG00005044137) dcun1d3 (ENSOTSG00005044134) lyrm1 (ENSOTSG00005044133) ENSOTSG00005044131 med24 (ENSOTSG00005044026) ENSOTSG00005044020 ENSOTSG00005044019 ENSOTSG00005044018 ENSOTSG00005043904 ENSOTSG00005043896 Coho salmon MODERN SPECIES 17 ENSOKIG00005049837 THRA (ENSOKIG00005049611) DHX8 (ENSOKIG00005049419) DHX8 (ENSOKIG00005049000) ETV4 (ENSOKIG00005048930) meox1 (ENSOKIG00005048924) SBK1 (ENSOKIG00005048921) ENSOKIG00005048910 h1-0 (ENSOKIG00005048906) rhbdl1 (ENSOKIG00005048890) zgc:112496 (ENSOKIG00005048872) wdr24 (ENSOKIG00005048857) ENSOKIG00005048851 PDPK1 (ENSOKIG00005048607) ##20 ENSOKIG00005048584 ##21 ENSOKIG00005048575 ##22 RNF40 (ENSOKIG00005048210) ENSOKIG00005048168 SLC17A7 (ENSOKIG00005047727) ENSOKIG00005047658 ENSOKIG00005047653 LUC7L (ENSOKIG00005047650) ENSOKIG00005047572 dcun1d3 (ENSOKIG00005047544) lyrm1 (ENSOKIG00005047538) ENSOKIG00005047533 ENSOKIG00005047529 med24 (ENSOKIG00005047339) ENSOKIG00005047304 ENSOKIG00005047298 ENSOKIG00005047197 Salmo ANCESTRAL SPECIES 78 ENSGT00390000001390.b.d ENSGT00390000015528.a ENSGT00390000006698 ENSGT00440000033742.a.a.b ENSGT00940000153801.a.d ENSGT00940000154852.a.e ENSGT00530000066748.d ENSGT00810000125570.c ENSGT00940000160651.b ENSGT00530000064671.d ENSGT00940000159396.f ENSGT00990000214316 ENSGT01030000235280 ENSGT00940000155267.y.b ##20 ENSGT00940000160374.q.a.a ##21 ENSGT00550000075088.a.a.e.b ##22 ENSGT00390000002866.a.h ENSGT00940000164729.a.b.c ENSGT00940000153561.b.a.b.a.b.a ENSGT00940000159110.a.j.a ENSGT00940000163157.a.a ENSGT00940000158125.a.g ENSGT00950000183213.a.a.b.c ENSGT00390000004566.f ENSGT00390000008812.b.b.a.b.a ENSGT00940000154944.x ENSGT00390000006695.m ENSGT01030000234586.A.a.a.a.d ENSGT00390000016438.jb.a ENSGT00940000164208.c ENSGT00940000163149.a.a.b.c.b.b Atlantic salmon MODERN SPECIES 10 tmem204 (ENSSSAG00000089190) telo2 (ENSSSAG00000045623) rab11fip3 (ENSSSAG00000046080) decr2 (ENSSSAG00000046097) ENSSSAG00000046117 ENSSSAG00000046130 h1-0 (ENSSSAG00000100431) rhbdl1 (ENSSSAG00000056910) zgc:112496 (ENSSSAG00000046195) wdr24 (ENSSSAG00000046217) ENSSSAG00000090438 ENSSSAG00000046658 ENSSSAG00000086106 ENSSSAG00000042015 ##20 ENSSSAG00000054472 ##21 ENSSSAG00000042879 ##22 ENSSSAG00000043048 ENSSSAG00000051349 ENSSSAG00000084683 ENSSSAG00000083553 ENSSSAG00000051354 ENSSSAG00000106070 ENSSSAG00000051442 ENSSSAG00000072237 ENSSSAG00000055104 ENSSSAG00000055128 ENSSSAG00000055144 ENSSSAG00000055169 lyrm1 (ENSSSAG00000055177) ENSSSAG00000110482 ENSSSAG00000055207 River trout MODERN SPECIES 1 tmem204 (ENSSTUG00000011138) ENSSTUG00000011143 telo2 (ENSSTUG00000011152) rab11fip3 (ENSSTUG00000011229) decr2 (ENSSTUG00000011251) SBK1 (ENSSTUG00000011389) ENSSTUG00000011403 h1-0 (ENSSTUG00000011415) rhbdl1 (ENSSTUG00000011423) wdr24 (ENSSTUG00000011439) ENSSTUG00000011480 ENSSTUG00000011490 ENSSTUG00000011500 pdpk1b (ENSSTUG00000011522) ##20 KCTD5 (ENSSTUG00000011740) ##21 ENSSTUG00000011750 ##22 RNF40 (ENSSTUG00000011795) ENSSTUG00000012292 ENSSTUG00000012295 SHANK1 (ENSSTUG00000012304) SLC17A7 (ENSSTUG00000012367) slc6a16b (ENSSTUG00000013145) ENSSTUG00000013153 luc7l (ENSSTUG00000013161) ENSSTUG00000013180 cdk5r1b (ENSSTUG00000013293) dcun1d3 (ENSSTUG00000013301) lyrm1 (ENSSTUG00000013308) ENSSTUG00000013320 med24 (ENSSTUG00000013342) ENSSTUG00000013592 Huchen MODERN SPECIES 268 ENSHHUG00000007042 ENSHHUG00000007039 telo2 (ENSHHUG00000006773) rab11fip3 (ENSHHUG00000006761) decr2 (ENSHHUG00000006753) SBK1 (ENSHHUG00000006747) ENSHHUG00000006730 rhot2 (ENSHHUG00000006692) h1-0 (ENSHHUG00000006670) rhbdl1 (ENSHHUG00000006660) wdr24 (ENSHHUG00000006650) ENSHHUG00000006609 ENSHHUG00000006599 pdpk1b (ENSHHUG00000006500) ##20 ENSHHUG00000006485 ##21 ENSHHUG00000006397 ##22 RNF40 (ENSHHUG00000006190) ENSHHUG00000006170 ENSHHUG00000006142 ENSHHUG00000006102 ENSHHUG00000006095 ENSHHUG00000006090 TMEM60 (ENSHHUG00000006085) PRR5 (ENSHHUG00000006071) ENSHHUG00000006038 ERC1 (ENSHHUG00000005481) FBXL14 (ENSHHUG00000005464) ENSHHUG00000005456 ENSHHUG00000005327 LRRN2 (ENSHHUG00000005251) hrasb (ENSHHUG00000005247) Northern pike MODERN SPECIES 4 h1-0 (ENSELUG00000001517) rhbdl1 (ENSELUG00000009736) zgc:112496 (ENSELUG00000009757) wdr24 (ENSELUG00000009793) anks3 (ENSELUG00000009821) zgc:112185 (ENSELUG00000009826) ENSELUG00000023281 UQCC4 (ENSELUG00000009841) ENSELUG00000009869 ##25 ENSELUG00000000362 ENSELUG00000000364 gnptg (ENSELUG00000010068) tsr3 (ENSELUG00000010103) pdpk1b (ENSELUG00000010174) #20 KCTD5 (ENSELUG00000010194) #21 ube2ia (ENSELUG00000031700) ##22 ENSELUG00000010242 ENSELUG00000010264 ccdc189 (ENSELUG00000010298) phkg2 (ENSELUG00000010321) RNF40 (ENSELUG00000010378) ENSELUG00000010400 ENSELUG00000010423 znf668 (ENSELUG00000010429) ENSELUG00000010432 ENSELUG00000010464 zgc:91999 (ENSELUG00000010522) SHANK1 (ENSELUG00000027826) ENSELUG00000000380 slc17a7a (ENSELUG00000010584) slc6a16b (ENSELUG00000010610) Acanthomorphata ANCESTRAL SPECIES 23 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000177683 ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b Euacanthomorphacea ANCESTRAL SPECIES 6 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000177683 ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b Pinecone sodierfish MODERN SPECIES 10 h1-0 (ENSMMDG00005009289) rhbdl1 (ENSMMDG00005009293) zgc:112496 (ENSMMDG00005009297) wdr24 (ENSMMDG00005013212) anks3 (ENSMMDG00005013224) zgc:112185 (ENSMMDG00005013227) h3f3a (ENSMMDG00005013229) ENSMMDG00005013231 ENSMMDG00005013233 ENSMMDG00005013235 ##25 ENSMMDG00005013251 gnptg (ENSMMDG00005013254) tsr3 (ENSMMDG00005013258) pdpk1b (ENSMMDG00005013281) #20 kctd5a (ENSMMDG00005014763) #21 ube2ia (ENSMMDG00005014765) #22 ENSMMDG00005014776 phkg2 (ENSMMDG00005014791) RNF40 (ENSMMDG00005014822) ENSMMDG00005014939 ENSMMDG00005014941 znf668 (ENSMMDG00005014942) ENSMMDG00005014946 zgc:91999 (ENSMMDG00005014950) SHANK1 (ENSMMDG00005015247) ENSMMDG00005015259 SLC17A7 (ENSMMDG00005015264) slc6a16b (ENSMMDG00005015288) ENSMMDG00005015346 luc7l (ENSMMDG00005015351) ENSMMDG00005015356 Percomorphaceae ANCESTRAL SPECIES 5 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000177683 ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b Tiger tail seahorse MODERN SPECIES 435 WDR90 (ENSHCOG00000015717) rhot2 (ENSHCOG00000015642) h1-0 (ENSHCOG00000000434) rhbdl1 (ENSHCOG00000015572) zgc:112496 (ENSHCOG00000015559) wdr24 (ENSHCOG00000015542) anks3 (ENSHCOG00000015518) zgc:112185 (ENSHCOG00000015502) ENSHCOG00000015494 ENSHCOG00000015491 C7orf50 (ENSHCOG00000015488) gnptg (ENSHCOG00000015474) tsr3 (ENSHCOG00000015455) pdpk1b (ENSHCOG00000015447) #20 kctd5a (ENSHCOG00000015392) #21 ube2ia (ENSHCOG00000015373) #22 ENSHCOG00000015357 ENSHCOG00000015322 phkg2 (ENSHCOG00000014957) RNF40 (ENSHCOG00000014932) ENSHCOG00000014890 Percomorphaceae_B ANCESTRAL SPECIES 4 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.a ENSGT01100000263504.a.b.b.a.b ENSGT00510000049652 ENSGT01100000263504.a.b.a.a ENSGT01030000235280 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000177683 ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b Ovalentaria ANCESTRAL SPECIES 13 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.a ENSGT01030000235280 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a Ovalentaria_B ANCESTRAL SPECIES 7 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.a ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Cichlidae ANCESTRAL SPECIES 15 ENSGT00940000160173 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Pseudocrenilabrinae ANCESTRAL SPECIES 9 ENSGT00940000160173 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Nile tilapia MODERN SPECIES 20 h1-0 (ENSONIG00000037924) rhbdl1 (ENSONIG00000019987) zgc:112496 (ENSONIG00000019986) wdr24 (ENSONIG00000019984) anks3 (ENSONIG00000019979) zgc:112185 (ENSONIG00000019978) ENSONIG00000019975 ENSONIG00000032038 lg8h7orf50 (ENSONIG00000034151) ENSONIG00000021208 ##25 ENSONIG00000034548 gnptg (ENSONIG00000019968) tsr3 (ENSONIG00000019966) pdpk1b (ENSONIG00000019961) #20 kctd5 (ENSONIG00000040621) #21 ube2i (ENSONIG00000036927) #22 ENSONIG00000019956 ENSONIG00000019955 phkg2 (ENSONIG00000019951) RNF40 (ENSONIG00000019949) ENSONIG00000033141 znf668 (ENSONIG00000021207) ENSONIG00000021206 zgc:91999 (ENSONIG00000019946) ENSONIG00000028603 ENSONIG00000036507 ENSONIG00000027460 SLC17A7 (ENSONIG00000019942) slc6a16b (ENSONIG00000019941) ENSONIG00000019939 luc7l (ENSONIG00000019938) Pseudocrenilabrinae_A ANCESTRAL SPECIES 7 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Haplochromini ANCESTRAL SPECIES 22 ENSGT00940000160173 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Haplochromini_A ANCESTRAL SPECIES 24 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.b ENSGT01030000235280 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a P. nyererei MODERN SPECIES 300 ENSPNYG00000016923 WDR90 (ENSPNYG00000016951) rhot2 (ENSPNYG00000017080) h1-0 (ENSPNYG00000017162) rhbdl1 (ENSPNYG00000017203) zgc:112496 (ENSPNYG00000017248) wdr24 (ENSPNYG00000017267) C7orf50 (ENSPNYG00000017298) ENSPNYG00000017309 ##25 gnptg (ENSPNYG00000017329) tsr3 (ENSPNYG00000017339) pdpk1b (ENSPNYG00000017347) #20 kctd5a (ENSPNYG00000017384) #21 ube2ia (ENSPNYG00000017397) #22 ENSPNYG00000017413 ENSPNYG00000017427 ccdc189 (ENSPNYG00000017475) phkg2 (ENSPNYG00000017491) RNF40 (ENSPNYG00000017540) ENSPNYG00000017692 znf668 (ENSPNYG00000017697) ENSPNYG00000017701 zgc:91999 (ENSPNYG00000017707) ENSPNYG00000017739 SLC17A7 (ENSPNYG00000017760) slc6a16b (ENSPNYG00000017815) ENSPNYG00000017855 luc7l (ENSPNYG00000017930) ENSPNYG00000017945 Haplochromini_B ANCESTRAL SPECIES 24 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.a ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Eastern happy MODERN SPECIES 20 WDR90 (ENSACLG00000011558) rhot2 (ENSACLG00000011733) h1-0 (ENSACLG00000011821) rhbdl1 (ENSACLG00000011909) zgc:112496 (ENSACLG00000011923) wdr24 (ENSACLG00000011934) anks3 (ENSACLG00000011990) zgc:112185 (ENSACLG00000012023) H3-3B (ENSACLG00000012035) C7orf50 (ENSACLG00000012070) ENSACLG00000012093 ##25 gnptg (ENSACLG00000012110) tsr3 (ENSACLG00000012171) pdpk1b (ENSACLG00000012187) #20 kctd5a (ENSACLG00000012250) #21 ube2ia (ENSACLG00000012338) #22 ENSACLG00000012382 ENSACLG00000012412 phkg2 (ENSACLG00000012452) RNF40 (ENSACLG00000012497) ENSACLG00000012712 znf668 (ENSACLG00000012717) ENSACLG00000012720 zgc:91999 (ENSACLG00000012726) ENSACLG00000012749 ENSACLG00000012851 SLC17A7 (ENSACLG00000012854) slc6a16b (ENSACLG00000012877) ENSACLG00000012895 ENSACLG00000012907 luc7l (ENSACLG00000012920) Zebra mbuna MODERN SPECIES 1111 h1-0 (ENSMZEG00005011567) rhot2 (ENSMZEG00005011542) rhbdl1 (ENSMZEG00005011521) zgc:112496 (ENSMZEG00005011489) wdr24 (ENSMZEG00005011469) anks3 (ENSMZEG00005011452) zgc:112185 (ENSMZEG00005011440) ENSMZEG00005011425 ENSMZEG00005011413 ##25 ENSMZEG00005011407 C7orf50 (ENSMZEG00005011400) gnptg (ENSMZEG00005011389) tsr3 (ENSMZEG00005011381) pdpk1b (ENSMZEG00005011364) #20 kctd5a (ENSMZEG00005011349) #21 ube2ia (ENSMZEG00005011333) #22 ENSMZEG00005011318 ENSMZEG00005011304 ccdc189 (ENSMZEG00005011294) phkg2 (ENSMZEG00005011284) RNF40 (ENSMZEG00005011271) ENSMZEG00005011264 znf668 (ENSMZEG00005011259) ENSMZEG00005011252 ENSMZEG00005011222 zgc:91999 (ENSMZEG00005011209) ENSMZEG00005011202 SLC17A7 (ENSMZEG00005011182) slc6a16b (ENSMZEG00005011172) ENSMZEG00005011152 luc7l (ENSMZEG00005011133) Burton s mouthbrooder MODERN SPECIES 538 WDR90 (ENSHBUG00000005424) rhot2 (ENSHBUG00000005340) h1-0 (ENSHBUG00000005284) rhbdl1 (ENSHBUG00000005259) zgc:112496 (ENSHBUG00000005240) wdr24 (ENSHBUG00000005223) anks3 (ENSHBUG00000005188) zgc:112185 (ENSHBUG00000005118) H3-3B (ENSHBUG00000005111) ENSHBUG00000005098 ##25 ENSHBUG00000005087 gnptg (ENSHBUG00000005075) tsr3 (ENSHBUG00000005030) pdpk1b (ENSHBUG00000005017) #20 kctd5a (ENSHBUG00000004977) #21 ube2ia (ENSHBUG00000004965) #22 ENSHBUG00000004945 ENSHBUG00000004937 ccdc189 (ENSHBUG00000004923) phkg2 (ENSHBUG00000004902) RNF40 (ENSHBUG00000004869) ENSHBUG00000004840 znf668 (ENSHBUG00000004828) ENSHBUG00000004826 ENSHBUG00000004819 zgc:91999 (ENSHBUG00000004796) ENSHBUG00000004778 ENSHBUG00000004767 SLC17A7 (ENSHBUG00000004740) slc6a16b (ENSHBUG00000004672) ENSHBUG00000004639 Lyretail cichlid MODERN SPECIES 366 h1-0 (ENSNBRG00000022910) rhbdl1 (ENSNBRG00000022891) zgc:112496 (ENSNBRG00000022874) wdr24 (ENSNBRG00000022859) anks3 (ENSNBRG00000022828) zgc:112185 (ENSNBRG00000022812) ENSNBRG00000022791 ENSNBRG00000022796 ENSNBRG00000022780 ##25 ENSNBRG00000022775 ENSNBRG00000022770 gnptg (ENSNBRG00000022762) tsr3 (ENSNBRG00000022755) pdpk1b (ENSNBRG00000022729) #20 kctd5a (ENSNBRG00000022719) #21 ube2ia (ENSNBRG00000022710) #22 ENSNBRG00000022699 ENSNBRG00000022678 phkg2 (ENSNBRG00000022660) RNF40 (ENSNBRG00000022573) ENSNBRG00000022534 znf668 (ENSNBRG00000022527) ENSNBRG00000022520 ENSNBRG00000022507 zgc:91999 (ENSNBRG00000022476) ENSNBRG00000022462 SLC17A7 (ENSNBRG00000022447) slc6a16b (ENSNBRG00000022426) luc7l (ENSNBRG00000022409) ENSNBRG00000022390 cox6b1 (ENSNBRG00000022350) Midas cichlid MODERN SPECIES 194 rhot2 (ENSACIG00000022722) h1-0 (ENSACIG00000022737) rhbdl1 (ENSACIG00000022753) zgc:112496 (ENSACIG00000022763) wdr24 (ENSACIG00000022775) anks3 (ENSACIG00000022785) zgc:112185 (ENSACIG00000022801) ENSACIG00000022816 ENSACIG00000022822 ##25 UQCC4 (ENSACIG00000022836) ENSACIG00000022840 gnptg (ENSACIG00000022849) tsr3 (ENSACIG00000022858) pdpk1b (ENSACIG00000022875) #20 kctd5a (ENSACIG00000022933) #21 ube2ia (ENSACIG00000022962) #22 ENSACIG00000022973 ENSACIG00000022991 phkg2 (ENSACIG00000023005) RNF40 (ENSACIG00000023016) ENSACIG00000023049 znf668 (ENSACIG00000023080) zgc:91999 (ENSACIG00000000155) ENSACIG00000000303 SLC17A7 (ENSACIG00000000354) slc6a16b (ENSACIG00000000396) ENSACIG00000000446 luc7l (ENSACIG00000000501) ENSACIG00000000588 cox6b1 (ENSACIG00000000613) ENSACIG00000000626 Pomacentridae ANCESTRAL SPECIES 13 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT01100000263504.a.b.a.b.a.a ENSGT00510000049652 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a ENSGT00950000183213.a.a.b Pomacentridae_A ANCESTRAL SPECIES 11 ENSGT00940000160173 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a ENSGT00510000049652 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a ENSGT00950000183213.a.a.b Amphiprion ANCESTRAL SPECIES 28 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a ENSGT00950000183213.a.a.b ENSGT00530000063694.a Clown anemonefish MODERN SPECIES 2574 gnptg (ENSAOCG00000012483) tsr3 (ENSAOCG00000012425) pdpk1b (ENSAOCG00000012406) #20 kctd5a (ENSAOCG00000012348) #21 ube2ia (ENSAOCG00000012323) #22 ENSAOCG00000012284 ENSAOCG00000012263 phkg2 (ENSAOCG00000012232) RNF40 (ENSAOCG00000012177) ENSAOCG00000012062 znf668 (ENSAOCG00000012047) ENSAOCG00000012028 Orange clownfish MODERN SPECIES 10 h1-0 (ENSAPEG00000007012) rhbdl1 (ENSAPEG00000006931) zgc:112496 (ENSAPEG00000006883) wdr24 (ENSAPEG00000006843) anks3 (ENSAPEG00000006819) zgc:112185 (ENSAPEG00000006804) ENSAPEG00000006779 ENSAPEG00000006774 ENSAPEG00000006754 ##25 ENSAPEG00000006749 ENSAPEG00000006739 gnptg (ENSAPEG00000006724) tsr3 (ENSAPEG00000006710) pdpk1b (ENSAPEG00000006656) #20 kctd5a (ENSAPEG00000006636) #21 ube2ia (ENSAPEG00000006614) #22 ENSAPEG00000006603 ENSAPEG00000006596 ccdc189 (ENSAPEG00000006570) phkg2 (ENSAPEG00000006543) RNF40 (ENSAPEG00000006447) ENSAPEG00000006427 znf668 (ENSAPEG00000006414) ENSAPEG00000006392 zgc:91999 (ENSAPEG00000006381) ENSAPEG00000006134 SLC17A7 (ENSAPEG00000006003) slc6a16b (ENSAPEG00000005968) ENSAPEG00000005927 luc7l (ENSAPEG00000005836) ENSAPEG00000005805 Spiny chromis MODERN SPECIES 92 h1-0 (ENSAPOG00000020772) rhbdl1 (ENSAPOG00000020724) zgc:112496 (ENSAPOG00000020711) wdr24 (ENSAPOG00000020674) anks3 (ENSAPOG00000020614) zgc:112185 (ENSAPOG00000020547) ENSAPOG00000020526 UQCC4 (ENSAPOG00000020538) ENSAPOG00000020504 ENSAPOG00000020495 ##25 ENSAPOG00000020489 ENSAPOG00000020477 tsr3 (ENSAPOG00000020463) pdpk1b (ENSAPOG00000020451) #20 kctd5a (ENSAPOG00000020363) #21 ube2ia (ENSAPOG00000000709) #22 ENSAPOG00000020311 ENSAPOG00000020304 ccdc189 (ENSAPOG00000020297) phkg2 (ENSAPOG00000020291) RNF40 (ENSAPOG00000020241) ENSAPOG00000020151 znf668 (ENSAPOG00000020145) ENSAPOG00000020140 zgc:91999 (ENSAPOG00000020130) SHANK1 (ENSAPOG00000020081) ENSAPOG00000019828 Bicolor damselfish MODERN SPECIES 2216 zgc:112496 (ENSSPAG00000016218) wdr24 (ENSSPAG00000016234) anks3 (ENSSPAG00000016270) zgc:112185 (ENSSPAG00000016304) h3f3d (ENSSPAG00000016333) ENSSPAG00000016319 ENSSPAG00000016353 ENSSPAG00000016367 ##25 ENSSPAG00000016372 gnptg (ENSSPAG00000016381) tsr3 (ENSSPAG00000016406) pdpk1b (ENSSPAG00000016432) #20 kctd5a (ENSSPAG00000016484) #21 ube2ia (ENSSPAG00000016501) #22 ENSSPAG00000016521 ENSSPAG00000016536 ENSSPAG00000016569 phkg2 (ENSSPAG00000016582) RNF40 (ENSSPAG00000016622) ENSSPAG00000016701 znf668 (ENSSPAG00000016743) Atherinomorphae ANCESTRAL SPECIES 10 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a.hb.a ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Oryzias ANCESTRAL SPECIES 11 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a.hb.b ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00940000177683 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a ENSGT00950000183213.a.a.b Oryzias_a ANCESTRAL SPECIES 17 ENSGT00940000160173 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a ENSGT00950000183213.a.a.b ENSGT00530000063694.a Japanese Medaka HdrR MODERN SPECIES 10 rhot2 (ENSORLG00000007637) h1-0 (ENSORLG00000007640) rhbdl1 (ENSORLG00000025565) zgc:112496 (ENSORLG00000025724) wdr24 (ENSORLG00000007670) anks3 (ENSORLG00000007676) zgc:112185 (ENSORLG00000029131) ENSORLG00000024249 ENSORLG00000026522 ENSORLG00000007693 ENSORLG00000007698 ##25 gnptg (ENSORLG00000007712) tsr3 (ENSORLG00000007723) pdpk1b (ENSORLG00000007757) #20 kctd5a (ENSORLG00000007764) #21 ube2ia (ENSORLG00000026618) #22 ENSORLG00000023799 ENSORLG00000030326 ENSORLG00000029751 phkg2 (ENSORLG00000007794) RNF40 (ENSORLG00000007866) ENSORLG00000007885 znf668 (ENSORLG00000007891) ENSORLG00000025957 ENSORLG00000025921 zgc:91999 (ENSORLG00000007914) ENSORLG00000007941 ENSORLG00000007982 ENSORLG00000008066 ENSORLG00000008095 luc7l (ENSORLG00000008117) Chinese medaka MODERN SPECIES 4709 ENSOSIG00000012267 #21 ube2ia (ENSOSIG00000012268) #22 Oryzias_b ANCESTRAL SPECIES 9 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a.hb.b ENSGT00510000049652 ENSGT01100000263504.a.b.b.a.b ENSGT00940000154307.A ##25 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00940000177683 ENSGT00950000182924.A.a ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT01000000222223 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Javanese ricefish MODERN SPECIES 10 rhot2 (ENSOJAG00000020001) h1-0 (ENSOJAG00000020261) rhbdl1 (ENSOJAG00000020270) zgc:112496 (ENSOJAG00000020300) wdr24 (ENSOJAG00000020315) anks3 (ENSOJAG00000020341) zgc:112185 (ENSOJAG00000020387) ENSOJAG00000020399 UQCC4 (ENSOJAG00000020411) ENSOJAG00000020435 ##25 ENSOJAG00000020444 gnptg (ENSOJAG00000020475) tsr3 (ENSOJAG00000020510) pdpk1b (ENSOJAG00000020572) #20 kctd5a (ENSOJAG00000021030) #21 ube2ia (ENSOJAG00000021045) #22 ENSOJAG00000021051 ENSOJAG00000021175 phkg2 (ENSOJAG00000021196) RNF40 (ENSOJAG00000021273) ENSOJAG00000021425 ENSOJAG00000021436 znf668 (ENSOJAG00000021443) ENSOJAG00000021448 ENSOJAG00000021460 zgc:91999 (ENSOJAG00000021476) ENSOJAG00000021492 ENSOJAG00000021501 ENSOJAG00000021519 SLC17A7 (ENSOJAG00000021606) slc6a16b (ENSOJAG00000008407) Indian medaka MODERN SPECIES 17 rhot2 (ENSOMEG00000000950) h1-0 (ENSOMEG00000016262) rhbdl1 (ENSOMEG00000016239) zgc:112496 (ENSOMEG00000016200) wdr24 (ENSOMEG00000016191) anks3 (ENSOMEG00000016147) zgc:112185 (ENSOMEG00000016091) ENSOMEG00000016075 ENSOMEG00000016062 ENSOMEG00000016036 ##25 ENSOMEG00000016029 gnptg (ENSOMEG00000016021) tsr3 (ENSOMEG00000015987) pdpk1b (ENSOMEG00000015947) #20 kctd5a (ENSOMEG00000015886) #21 ube2ia (ENSOMEG00000015845) #22 ENSOMEG00000015815 ENSOMEG00000015788 phkg2 (ENSOMEG00000015773) RNF40 (ENSOMEG00000015737) ENSOMEG00000015658 znf668 (ENSOMEG00000015649) ENSOMEG00000015643 ENSOMEG00000015626 zgc:91999 (ENSOMEG00000015565) ENSOMEG00000015523 ENSOMEG00000015483 SLC17A7 (ENSOMEG00000015470) ENSOMEG00000015408 slc6a16b (ENSOMEG00000015382) ENSOMEG00000015308 Cyprinodontiformes ANCESTRAL SPECIES 13 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a.ib ENSGT00510000049652 ENSGT01100000263504.a.b.a.a.hb.a ENSGT01030000235280 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Aplocheiloidei ANCESTRAL SPECIES 4 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT00510000049652 ENSGT01100000263504.a.b.a.a.hb.a ENSGT01030000235280 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a ENSGT00950000183213.a.a.b Mangrove rivulus MODERN SPECIES 43 ENSKMAG00000012540 rhot2 (ENSKMAG00000012477) h1-0 (ENSKMAG00000012456) rhbdl1 (ENSKMAG00000012424) zgc:112496 (ENSKMAG00000012395) wdr24 (ENSKMAG00000012363) anks3 (ENSKMAG00000012345) zgc:112185 (ENSKMAG00000012333) ENSKMAG00000012319 ENSKMAG00000012299 ENSKMAG00000012291 ##25 gnptg (ENSKMAG00000012272) tsr3 (ENSKMAG00000012259) pdpk1b (ENSKMAG00000012214) #20 kctd5a (ENSKMAG00000012164) #21 ube2ia (ENSKMAG00000012131) #22 ENSKMAG00000012114 ENSKMAG00000012102 ENSKMAG00000012087 phkg2 (ENSKMAG00000012062) RNF40 (ENSKMAG00000012004) ENSKMAG00000011982 znf668 (ENSKMAG00000011974) ENSKMAG00000011942 zgc:91999 (ENSKMAG00000011918) SHANK1 (ENSKMAG00000011216) ENSKMAG00000011027 SLC17A7 (ENSKMAG00000010957) slc6a16b (ENSKMAG00000010880) ENSKMAG00000010833 luc7l (ENSKMAG00000010801) Turquoise killifish MODERN SPECIES 1621 H1F0 (ENSNFUG00015021492) RHBDL1 (ENSNFUG00015021488) zgc:112496 (ENSNFUG00015021482) wdr24 (ENSNFUG00015021478) ANKS3 (ENSNFUG00015021474) zgc:112185 (ENSNFUG00015021471) H3F3B.1 (ENSNFUG00015021467) ENSNFUG00015021466 ENSNFUG00015021464 ##25 ENSNFUG00015021463 ENSNFUG00015021462 GNPTG (ENSNFUG00015021446) tsr3 (ENSNFUG00015021441) pdpk1b (ENSNFUG00015020901) #20 kctd5a (ENSNFUG00015020878) #21 UBE2I2 (ENSNFUG00015020875) #22 ENSNFUG00015020873 CABZ01072828.1 (ENSNFUG00015020869) CU929145.4 (ENSNFUG00015020868) NUBP2 (ENSNFUG00015020865) Nfu_g_1_022957 (ENSNFUG00015020862) ENSNFUG00015020855 ntn2 (ENSNFUG00015020850) NOG2 (ENSNFUG00015020847) ENSNFUG00015020846 CABZ01117977.1 (ENSNFUG00015020828) SOLH (ENSNFUG00015020769) MSS51 (ENSNFUG00015020764) MSS51 (ENSNFUG00015020759) ENSNFUG00015020756 COG7 (ENSNFUG00015020600) Cyprinodontoidei ANCESTRAL SPECIES 17 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a.ib ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a ENSGT00950000183213.a.a.b Poeciliinae ANCESTRAL SPECIES 10 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a.ib ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a ENSGT00950000183213.a.a.b Poecilia ANCESTRAL SPECIES 22 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a.ib ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665.c ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b.b ENSGT00650000094874 ENSGT00940000164729.a.b.a ENSGT00940000165156 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a ENSGT00950000183213.a.a.b NAME_6 ANCESTRAL SPECIES 121 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665.c ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b.a ENSGT00940000165156 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b Amazon molly MODERN SPECIES 662 ENSPFOG00000015436 zgc:112185 (ENSPFOG00000015452) ENSPFOG00000015426 ENSPFOG00000024069 ENSPFOG00000020622 ##25 ENSPFOG00000022155 C7orf50 (ENSPFOG00000015411) gnptg (ENSPFOG00000015351) tsr3 (ENSPFOG00000015332) tsr3 (ENSPFOG00000015318) pdpk1b (ENSPFOG00000015275) #20 gnptg (ENSPFOG00000015259) tsr3 (ENSPFOG00000015238) pdpk1b (ENSPFOG00000015149) #20 kctd5a (ENSPFOG00000015132) #21 ube2ia (ENSPFOG00000015114) #22 ENSPFOG00000015106 ENSPFOG00000023486 ENSPFOG00000015091 phkg2 (ENSPFOG00000015039) RNF40 (ENSPFOG00000024848) TXNIP (ENSPFOG00000014977) ENSPFOG00000014955 aldh5a1 (ENSPFOG00000014906) KIAA0319 (ENSPFOG00000014900) DENND4B (ENSPFOG00000014728) ENSPFOG00000014665 Sailfin molly MODERN SPECIES 2799 tsr3 (ENSPLAG00000006670) pdpk1b (ENSPLAG00000006693) #20 kctd5a (ENSPLAG00000006710) #21 ube2ia (ENSPLAG00000006737) #22 Guppy MODERN SPECIES 449 h1-0 (ENSPREG00000018024) rhbdl1 (ENSPREG00000018012) zgc:112496 (ENSPREG00000018000) wdr24 (ENSPREG00000017977) ENSPREG00000017970 zgc:112185 (ENSPREG00000017958) ENSPREG00000017943 UQCC4 (ENSPREG00000017939) ENSPREG00000017925 ##25 ENSPREG00000017912 C7orf50 (ENSPREG00000017902) gnptg (ENSPREG00000017858) tsr3 (ENSPREG00000017832) pdpk1b (ENSPREG00000017813) #20 kctd5a (ENSPREG00000017801) #21 ube2ia (ENSPREG00000017779) #22 ENSPREG00000017751 phkg2 (ENSPREG00000017698) RNF40 (ENSPREG00000017663) ENSPREG00000017650 ENSPREG00000017637 znf668 (ENSPREG00000017631) zgc:91999 (ENSPREG00000017574) SHANK1 (ENSPREG00000017528) ENSPREG00000017514 SLC17A7 (ENSPREG00000017499) slc6a16b (ENSPREG00000017473) ENSPREG00000017448 luc7l (ENSPREG00000017430) ENSPREG00000017418 ENSPREG00000017392 Platyfish MODERN SPECIES 1 rhot2 (ENSXMAG00000001357) h1-0 (ENSXMAG00000020306) rhbdl1 (ENSXMAG00000021468) zgc:112496 (ENSXMAG00000018971) wdr24 (ENSXMAG00000018970) anks3 (ENSXMAG00000018960) zgc:112185 (ENSXMAG00000024119) UQCC4 (ENSXMAG00000022593) ENSXMAG00000019424 ##25 ENSXMAG00000029415 ENSXMAG00000018950 gnptg (ENSXMAG00000018928) tsr3 (ENSXMAG00000018921) pdpk1b (ENSXMAG00000018875) #20 kctd5a (ENSXMAG00000029782) #21 ube2ia (ENSXMAG00000018837) #22 ENSXMAG00000018833 ccdc189 (ENSXMAG00000018831) phkg2 (ENSXMAG00000018776) RNF40 (ENSXMAG00000018747) ENSXMAG00000018743 znf668 (ENSXMAG00000004424) ENSXMAG00000026140 zgc:91999 (ENSXMAG00000004969) ENSXMAG00000029947 SHANK1 (ENSXMAG00000027858) ENSXMAG00000018725 SLC17A7 (ENSXMAG00000018700) slc6a16b (ENSXMAG00000022899) ENSXMAG00000029213 ENSXMAG00000018660 NAME_4 ANCESTRAL SPECIES 15 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a.ib ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00530000067530 ENSGT00940000165127.b ENSGT00950000182924.A.a ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Sheepshead minnow MODERN SPECIES 368 gnptg (ENSCVAG00000022416) tsr3 (ENSCVAG00000022421) pdpk1b (ENSCVAG00000022460) #20 kctd5a (ENSCVAG00000022511) #21 ube2ia (ENSCVAG00000022539) #22 ENSCVAG00000022546 phkg2 (ENSCVAG00000022564) RNF40 (ENSCVAG00000022625) ENSCVAG00000022644 znf668 (ENSCVAG00000022648) ENSCVAG00000022661 zgc:91999 (ENSCVAG00000022707) SHANK1 (ENSCVAG00000022791) ENSCVAG00000022818 slc6a16b (ENSCVAG00000022856) ENSCVAG00000022874 luc7l (ENSCVAG00000022878) ENSCVAG00000022883 cox6b1 (ENSCVAG00000022894) ENSCVAG00000022918 Mummichog MODERN SPECIES 2201 h1-0 (ENSFHEG00000001753) rhbdl1 (ENSFHEG00000001749) zgc:112496 (ENSFHEG00000001746) wdr24 (ENSFHEG00000001741) ENSFHEG00000001738 zgc:112185 (ENSFHEG00000001733) UQCC4 (ENSFHEG00000023212) ENSFHEG00000023235 ENSFHEG00000023204 ENSFHEG00000023200 ##25 ENSFHEG00000023190 gnptg (ENSFHEG00000023157) tsr3 (ENSFHEG00000023149) pdpk1b (ENSFHEG00000023132) #20 kctd5a (ENSFHEG00000023074) #21 ube2ia (ENSFHEG00000023043) #22 ENSFHEG00000022993 ENSFHEG00000022978 phkg2 (ENSFHEG00000000568) RNF40 (ENSFHEG00000022908) ENSFHEG00000000561 znf668 (ENSFHEG00000022886) ENSFHEG00000022881 zgc:91999 (ENSFHEG00000022868) SHANK1 (ENSFHEG00000022853) ENSFHEG00000022778 SLC17A7 (ENSFHEG00000022757) ENSFHEG00000022715 ENSFHEG00000022682 luc7l (ENSFHEG00000022662) ENSFHEG00000022638 Percomorphaceae_C ANCESTRAL SPECIES 14 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.a ENSGT01030000235280 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000177683 ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b Eupercaria ANCESTRAL SPECIES 10 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.b ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000177683 ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b Tetraodontidae ANCESTRAL SPECIES ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000177683 ENSGT00940000165156 ENSGT00600000085580 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Fugu MODERN SPECIES rhot2 (ENSTRUG00000015409) h1-0 (ENSTRUG00000024571) rhbdl1 (ENSTRUG00000015465) zgc:112496 (ENSTRUG00000015504) wdr24 (ENSTRUG00000015505) anks3 (ENSTRUG00000015536) zgc:112185 (ENSTRUG00000022214) ENSTRUG00000021197 ENSTRUG00000015579 ##25 ENSTRUG00000031326 ENSTRUG00000019560 gnptg (ENSTRUG00000019704) tsr3 (ENSTRUG00000015589) pdpk1b (ENSTRUG00000015599) #20 kctd5a (ENSTRUG00000015652) #21 ube2ia (ENSTRUG00000015684) #22 ENSTRUG00000015691 ENSTRUG00000023833 phkg2 (ENSTRUG00000015722) RNF40 (ENSTRUG00000015777) ENSTRUG00000025597 ENSTRUG00000027067 znf668 (ENSTRUG00000020313) ENSTRUG00000030230 zgc:91999 (ENSTRUG00000015998) SHANK1 (ENSTRUG00000016035) ENSTRUG00000030898 ENSTRUG00000021329 SLC17A7 (ENSTRUG00000016136) slc6a16b (ENSTRUG00000016167) ENSTRUG00000016265 Eupecaria_A ANCESTRAL SPECIES 1 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000177683 ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b Ballan wrasse MODERN SPECIES 103 WDR90 (ENSLBEG00000015236) rhot2 (ENSLBEG00000015749) h1-0 (ENSLBEG00000015805) rhbdl1 (ENSLBEG00000015840) zgc:112496 (ENSLBEG00000015872) wdr24 (ENSLBEG00000015910) anks3 (ENSLBEG00000015948) zgc:112185 (ENSLBEG00000015995) ENSLBEG00000016016 ENSLBEG00000016029 C7orf50 (ENSLBEG00000016043) gnptg (ENSLBEG00000016080) tsr3 (ENSLBEG00000016169) pdpk1b (ENSLBEG00000016210) #20 kctd5a (ENSLBEG00000016257) #21 ube2ia (ENSLBEG00000016326) #22 ENSLBEG00000016347 ENSLBEG00000016389 phkg2 (ENSLBEG00000016418) RNF40 (ENSLBEG00000016478) ENSLBEG00000016537 ENSLBEG00000016562 znf668 (ENSLBEG00000016574) ENSLBEG00000016588 ENSLBEG00000016598 ENSLBEG00000016620 ENSLBEG00000016668 SLC17A7 (ENSLBEG00000016707) slc6a16b (ENSLBEG00000016766) ENSLBEG00000016849 luc7l (ENSLBEG00000016917) Eupecaria_B ANCESTRAL SPECIES 3 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.a.db.a ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00940000177683 ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b Eupecaria_C ANCESTRAL SPECIES 1 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.a.eb ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000177683 ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 1 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.a.db.a ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000177683 ENSGT00940000165156 ENSGT00600000085580 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Large yellow croaker MODERN SPECIES 488 rhbdl1 (ENSLCRG00005010662) zgc:112496 (ENSLCRG00005010667) wdr24 (ENSLCRG00005010670) anks3 (ENSLCRG00005010672) ENSLCRG00005010673 zgc:112185 (ENSLCRG00005010676) ENSLCRG00005010677 ENSLCRG00005010679 ENSLCRG00005010681 ##25 ENSLCRG00005010682 ENSLCRG00005010683 gnptg (ENSLCRG00005010687) tsr3 (ENSLCRG00005010703) pdpk1b (ENSLCRG00005010738) #20 kctd5a (ENSLCRG00005011379) #21 ube2ia (ENSLCRG00005011384) #22 ENSLCRG00005011423 ENSLCRG00005011425 ENSLCRG00005011427 phkg2 (ENSLCRG00005011429) RNF40 (ENSLCRG00005011434) ENSLCRG00005011555 znf668 (ENSLCRG00005011556) ENSLCRG00005011560 ENSLCRG00005011565 zgc:91999 (ENSLCRG00005011570) ENSLCRG00005011579 ENSLCRG00005011576 ENSLCRG00005011583 SLC17A7 (ENSLCRG00005011600) ENSLCRG00005012088 European seabass MODERN SPECIES 11 ENSDLAG00005006125 WDR90 (ENSDLAG00005005444) H10 (ENSDLAG00005032394) rhot2 (ENSDLAG00005005082) rhbdl1 (ENSDLAG00005005040) zgc:112496 (ENSDLAG00005005028) wdr24 (ENSDLAG00005005008) anks3 (ENSDLAG00005004974) zgc:112185 (ENSDLAG00005004961) h3f3d (ENSDLAG00005004948) ENSDLAG00005034972 ##25 ENSDLAG00005030251 ENSDLAG00005004760 ENSDLAG00005003673 #20 ENSDLAG00005031692 #21 UBE2I (ENSDLAG00005003573) #22 ENSDLAG00005003559 ENSDLAG00005003355 PHKG2 (ENSDLAG00005002972) ENSDLAG00005001929 ENSDLAG00005001884 ENSDLAG00005001875 znf668 (ENSDLAG00005001872) ENSDLAG00005001825 ENSDLAG00005001804 ENSDLAG00005001792 ENSDLAG00005001425 ENSDLAG00005001251 ENSDLAG00005001216 luc7l (ENSDLAG00005001212) ENSDLAG00005029651 Gilthead seabream MODERN SPECIES 12 h1-0 (ENSSAUG00010016466) rhbdl1 (ENSSAUG00010016462) zgc:112496 (ENSSAUG00010016455) wdr24 (ENSSAUG00010016441) anks3 (ENSSAUG00010016416) ENSSAUG00010016409 H3-3B (ENSSAUG00010016400) ENSSAUG00010016394 ENSSAUG00010016384 ##25 ENSSAUG00010016382 C7orf50 (ENSSAUG00010016381) gnptg (ENSSAUG00010016376) tsr3 (ENSSAUG00010016374) pdpk1b (ENSSAUG00010014638) #20 kctd5a (ENSSAUG00010014587) #21 ube2ia (ENSSAUG00010014584) #22 ENSSAUG00010014581 ENSSAUG00010014580 ccdc189 (ENSSAUG00010014576) phkg2 (ENSSAUG00010014572) RNF40 (ENSSAUG00010014508) ENSSAUG00010014503 znf668 (ENSSAUG00010014499) ENSSAUG00010014497 ENSSAUG00010014493 zgc:91999 (ENSSAUG00010014490) SHANK1 (ENSSAUG00010014486) ENSSAUG00010014481 SLC17A7 (ENSSAUG00010014309) slc6a16b (ENSSAUG00010014258) ENSSAUG00010014255 Perciformes ANCESTRAL SPECIES 9 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.b.a.b ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00530000067530 ENSGT00940000165156 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a Cottioidei ANCESTRAL SPECIES 12 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.b ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00650000094874 ENSGT00940000164729.a.b ENSGT00530000067530 ENSGT00940000165156 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a Lumpfish MODERN SPECIES 10 h1-0 (ENSCLMG00005009277) rhbdl1 (ENSCLMG00005009275) zgc:112496 (ENSCLMG00005009274) wdr24 (ENSCLMG00005009269) anks3 (ENSCLMG00005009263) zgc:112185 (ENSCLMG00005009261) ENSCLMG00005009258 ENSCLMG00005009255 ENSCLMG00005009254 ##25 ENSCLMG00005009253 ENSCLMG00005009252 gnptg (ENSCLMG00005009251) tsr3 (ENSCLMG00005009250) pdpk1b (ENSCLMG00005007749) #20 kctd5a (ENSCLMG00005007736) #21 ube2ia (ENSCLMG00005007735) #22 ENSCLMG00005007722 ccdc189 (ENSCLMG00005007720) phkg2 (ENSCLMG00005007717) RNF40 (ENSCLMG00005007667) ENSCLMG00005007665 ENSCLMG00005007664 znf668 (ENSCLMG00005007663) ENSCLMG00005007662 zgc:91999 (ENSCLMG00005007661) SHANK1 (ENSCLMG00005007535) ENSCLMG00005007523 SLC17A7 (ENSCLMG00005007520) slc6a16b (ENSCLMG00005007463) ENSCLMG00005007462 luc7l (ENSCLMG00005007459) Stickleback MODERN SPECIES 5 WDR90 (ENSGACG00000009083) rhot2 (ENSGACG00000009036) h1-0 (ENSGACG00000009033) rhbdl1 (ENSGACG00000009028) zgc:112496 (ENSGACG00000009025) wdr24 (ENSGACG00000009003) anks3 (ENSGACG00000008992) zgc:112185 (ENSGACG00000008987) ENSGACG00000008983 ENSGACG00000008980 ##25 C7orf50 (ENSGACG00000008975) gnptg (ENSGACG00000008965) tsr3 (ENSGACG00000008959) pdpk1b (ENSGACG00000008933) #20 kctd5a (ENSGACG00000008924) #21 ube2ia (ENSGACG00000008893) #22 ENSGACG00000008886 ENSGACG00000008873 ENSGACG00000008870 phkg2 (ENSGACG00000008802) RNF40 (ENSGACG00000008782) ENSGACG00000008777 ENSGACG00000008733 znf668 (ENSGACG00000008728) ENSGACG00000008723 ENSGACG00000008717 zgc:91999 (ENSGACG00000008706) SHANK1 (ENSGACG00000008689) ENSGACG00000008686 ENSGACG00000008680 ENSGACG00000008675 Perciformes_a ANCESTRAL SPECIES 8 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT00510000049652 ENSGT00390000017838 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00940000177683 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a ENSGT00950000183213.a.a.b Channel bull blenny MODERN SPECIES 10 h1-0 (ENSCGOG00000005687) rhbdl1 (ENSCGOG00000005688) zgc:112496 (ENSCGOG00000005699) wdr24 (ENSCGOG00000005708) anks3 (ENSCGOG00000005786) ENSCGOG00000005807 ENSCGOG00000005914 ENSCGOG00000005812 ENSCGOG00000005916 ENSCGOG00000005927 ##25 ENSCGOG00000005932 gnptg (ENSCGOG00000005937) tsr3 (ENSCGOG00000006082) pdpk1b (ENSCGOG00000006095) #20 kctd5a (ENSCGOG00000006178) #21 ube2ia (ENSCGOG00000006194) #22 ENSCGOG00000006324 ENSCGOG00000006328 phkg2 (ENSCGOG00000006362) ccdc189 (ENSCGOG00000006341) RNF40 (ENSCGOG00000007042) ENSCGOG00000007412 znf668 (ENSCGOG00000007414) ENSCGOG00000007415 zgc:91999 (ENSCGOG00000007420) ENSCGOG00000007442 ENSCGOG00000007445 ENSCGOG00000007446 SLC17A7 (ENSCGOG00000007486) slc6a16b (ENSCGOG00000009837) ENSCGOG00000009859 Pike perch MODERN SPECIES 89 h1-0 (ENSSLUG00000014072) rhbdl1 (ENSSLUG00000014081) zgc:112496 (ENSSLUG00000014094) wdr24 (ENSSLUG00000014098) anks3 (ENSSLUG00000014118) zgc:112185 (ENSSLUG00000014140) ENSSLUG00000014144 ENSSLUG00000014146 ENSSLUG00000014151 ENSSLUG00000014156 ##25 ENSSLUG00000014163 gnptg (ENSSLUG00000014177) tsr3 (ENSSLUG00000014284) pdpk1b (ENSSLUG00000014406) #20 kctd5a (ENSSLUG00000016398) #21 ube2ia (ENSSLUG00000016403) #22 ENSSLUG00000016414 ENSSLUG00000016432 ccdc189 (ENSSLUG00000016445) phkg2 (ENSSLUG00000016460) RNF40 (ENSSLUG00000016518) ENSSLUG00000016655 znf668 (ENSSLUG00000016656) ENSSLUG00000016665 zgc:91999 (ENSSLUG00000016672) ENSSLUG00000016679 ENSSLUG00000016690 SLC17A7 (ENSSLUG00000016701) slc6a16b (ENSSLUG00000016723) ENSSLUG00000016741 luc7l (ENSSLUG00000016844) Percomorphaceae_D ANCESTRAL SPECIES 13 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.a ENSGT01030000235280 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00600000085580 ENSGT00950000182924.A.a ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a Anabantaria ANCESTRAL SPECIES 18 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.a ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Anabantoidei ANCESTRAL SPECIES 10 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.a ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Climbing perch MODERN SPECIES 10 h1-0 (ENSATEG00000015740) rhbdl1 (ENSATEG00000015715) zgc:112496 (ENSATEG00000015689) wdr24 (ENSATEG00000015645) anks3 (ENSATEG00000015598) zgc:112185 (ENSATEG00000015588) ENSATEG00000015580 ENSATEG00000015571 ENSATEG00000015566 ##25 ENSATEG00000015554 ENSATEG00000027704 gnptg (ENSATEG00000015510) ENSATEG00000015497 pdpk1b (ENSATEG00000015476) #20 ENSATEG00000026929 #21 ENSATEG00000029881 #22 ENSATEG00000015407 ENSATEG00000015359 ENSATEG00000015330 ENSATEG00000015300 ENSATEG00000015215 ENSATEG00000015206 znf668 (ENSATEG00000015200) ENSATEG00000015191 ENSATEG00000015176 ENSATEG00000015164 ENSATEG00000015135 ENSATEG00000015112 ENSATEG00000015073 ENSATEG00000015029 ENSATEG00000014979 Siamese fighting fish MODERN SPECIES 9 rhot2 (ENSBSLG00000018386) h1-0 (ENSBSLG00000018365) rhbdl1 (ENSBSLG00000018340) zgc:112496 (ENSBSLG00000018324) wdr24 (ENSBSLG00000018287) anks3 (ENSBSLG00000018216) zgc:112185 (ENSBSLG00000018178) ENSBSLG00000018064 ENSBSLG00000018059 ENSBSLG00000018051 ##25 ENSBSLG00000018046 gnptg (ENSBSLG00000018036) tsr3 (ENSBSLG00000018025) pdpk1b (ENSBSLG00000017733) #20 kctd5a (ENSBSLG00000017643) #21 ube2ia (ENSBSLG00000017621) #22 ENSBSLG00000017612 ENSBSLG00000017544 ENSBSLG00000017533 phkg2 (ENSBSLG00000017380) RNF40 (ENSBSLG00000016918) ENSBSLG00000016876 znf668 (ENSBSLG00000016833) ENSBSLG00000016717 zgc:91999 (ENSBSLG00000016659) ENSBSLG00000016613 ENSBSLG00000015625 ENSBSLG00000015606 SLC17A7 (ENSBSLG00000015534) slc6a16b (ENSBSLG00000015419) ENSBSLG00000015406 Zig-zag eel MODERN SPECIES 10 h1-0 (ENSMAMG00000009899) rhbdl1 (ENSMAMG00000009868) zgc:112496 (ENSMAMG00000009861) wdr24 (ENSMAMG00000009856) anks3 (ENSMAMG00000009842) zgc:112185 (ENSMAMG00000009837) ENSMAMG00000009830 ENSMAMG00000025403 ENSMAMG00000009816 ##25 ENSMAMG00000009800 ENSMAMG00000009795 gnptg (ENSMAMG00000009711) ENSMAMG00000009692 pdpk1b (ENSMAMG00000009646) #20 ENSMAMG00000009623 #21 ENSMAMG00000009603 #22 ENSMAMG00000009588 ENSMAMG00000009409 ENSMAMG00000009389 ENSMAMG00000009367 ENSMAMG00000009321 ENSMAMG00000009313 znf668 (ENSMAMG00000009288) ENSMAMG00000009258 ENSMAMG00000009208 ENSMAMG00000025321 ENSMAMG00000024304 ENSMAMG00000009134 ENSMAMG00000009108 ENSMAMG00000009074 ENSMAMG00000009025 Carangaria ANCESTRAL SPECIES 13 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.a ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00600000085580 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Carangaria_A ANCESTRAL SPECIES 5 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.a ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a ENSGT00950000183213.a.a.b Seriola ANCESTRAL SPECIES 1 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.b.a.a ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00940000168122 ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a ENSGT00950000183213.a.a.b Greater amberjack MODERN SPECIES 27 WDR90 (ENSSDUG00000001847) rhot2 (ENSSDUG00000002135) h1-0 (ENSSDUG00000002166) rhbdl1 (ENSSDUG00000002186) zgc:112496 (ENSSDUG00000002208) wdr24 (ENSSDUG00000002242) anks3 (ENSSDUG00000002292) zgc:112185 (ENSSDUG00000002307) h3f3d (ENSSDUG00000002317) ENSSDUG00000002331 ##25 ENSSDUG00000002343 gnptg (ENSSDUG00000002350) tsr3 (ENSSDUG00000002376) pdpk1b (ENSSDUG00000002401) #20 kctd5a (ENSSDUG00000002442) #21 ube2ia (ENSSDUG00000002471) #22 ENSSDUG00000002502 ENSSDUG00000002512 ccdc189 (ENSSDUG00000002535) phkg2 (ENSSDUG00000002554) RNF40 (ENSSDUG00000002602) ENSSDUG00000002675 znf668 (ENSSDUG00000002686) ENSSDUG00000002695 zgc:91999 (ENSSDUG00000002713) SHANK1 (ENSSDUG00000002741) ENSSDUG00000002791 SLC17A7 (ENSSDUG00000002820) slc6a16b (ENSSDUG00000002861) ENSSDUG00000002915 luc7l (ENSSDUG00000002962) Yellowtail amberjack MODERN SPECIES 2878 h1-0 (ENSSLDG00000013187) rhbdl1 (ENSSLDG00000013218) zgc:112496 (ENSSLDG00000013249) wdr24 (ENSSLDG00000013271) anks3 (ENSSLDG00000013297) zgc:112185 (ENSSLDG00000013332) ENSSLDG00000013342 ENSSLDG00000013357 ENSSLDG00000013367 ENSSLDG00000013380 ##25 ENSSLDG00000013391 gnptg (ENSSLDG00000013399) tsr3 (ENSSLDG00000013425) pdpk1b (ENSSLDG00000013442) #20 kctd5a (ENSSLDG00000013466) #21 ube2ia (ENSSLDG00000013487) #22 ENSSLDG00000013508 ENSSLDG00000013527 phkg2 (ENSSLDG00000013545) RNF40 (ENSSLDG00000013579) Barramundi perch MODERN SPECIES 195 rhbdl1 (ENSLCAG00010026666) zgc:112496 (ENSLCAG00010026665) wdr24 (ENSLCAG00010026663) anks3 (ENSLCAG00010026660) zgc:112185 (ENSLCAG00010026656) H3-3B (ENSLCAG00010026650) UQCC4 (ENSLCAG00010026646) ENSLCAG00010026645 ##25 ENSLCAG00010026643 ENSLCAG00010026641 ENSLCAG00010026640 gnptg (ENSLCAG00010026639) tsr3 (ENSLCAG00010026636) pdpk1b (ENSLCAG00010026559) #20 kctd5a (ENSLCAG00010026493) #21 ube2ia (ENSLCAG00010026480) #22 ENSLCAG00010026474 ENSLCAG00010026464 ccdc189 (ENSLCAG00010026452) phkg2 (ENSLCAG00010026450) RNF40 (ENSLCAG00010026446) ENSLCAG00010026442 znf668 (ENSLCAG00010026440) ENSLCAG00010026439 Pleuronectoidei ANCESTRAL SPECIES 6 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 ENSGT01100000263504.a.b.a.a ENSGT00510000049652 ENSGT00940000154307.A ##25 ENSGT00390000006068 ENSGT00390000017838 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00940000167095.A ENSGT00940000166841 ENSGT00940000154323.a ENSGT00940000160435 ENSGT00390000002866.a ENSGT00940000164729.a.b ENSGT00940000165156 ENSGT00600000085580 ENSGT00950000182924.A.a ENSGT00950000182973.b.b.d ENSGT00940000153561.b.a.b.a.b ENSGT00440000036191 ENSGT00940000159110.b ENSGT00940000163157.a ENSGT00940000158125.a Tongue sole MODERN SPECIES 18 rhot2 (ENSCSEG00000011917) h1-0 (ENSCSEG00000011984) rhbdl1 (ENSCSEG00000011999) zgc:112496 (ENSCSEG00000012019) wdr24 (ENSCSEG00000012040) anks3 (ENSCSEG00000012075) zgc:112185 (ENSCSEG00000012091) ENSCSEG00000012098 ENSCSEG00000012103 ENSCSEG00000012112 ##25 ENSCSEG00000012131 gnptg (ENSCSEG00000012145) tsr3 (ENSCSEG00000012153) pdpk1b (ENSCSEG00000012164) #20 kctd5a (ENSCSEG00000012252) #21 ube2ia (ENSCSEG00000012272) #22 ENSCSEG00000012294 ENSCSEG00000012308 ENSCSEG00000012337 phkg2 (ENSCSEG00000012354) ccdc189 (ENSCSEG00000012372) RNF40 (ENSCSEG00000012378) ENSCSEG00000012389 znf668 (ENSCSEG00000012396) ENSCSEG00000012401 zgc:91999 (ENSCSEG00000012409) SHANK1 (ENSCSEG00000012421) ENSCSEG00000012447 SLC17A7 (ENSCSEG00000012476) slc6a16b (ENSCSEG00000012489) ENSCSEG00000012501 Turbot MODERN SPECIES 9 h1-0 (ENSSMAG00000013086) rhbdl1 (ENSSMAG00000013007) zgc:112496 (ENSSMAG00000012995) wdr24 (ENSSMAG00000012953) anks3 (ENSSMAG00000012934) zgc:112185 (ENSSMAG00000012926) ENSSMAG00000012681 ENSSMAG00000028838 ENSSMAG00000012670 ##25 ENSSMAG00000029545 ENSSMAG00000012666 gnptg (ENSSMAG00000012637) ENSSMAG00000012626 pdpk1b (ENSSMAG00000012584) #20 ENSSMAG00000012558 #21 ENSSMAG00000012548 #22 ENSSMAG00000026374 ENSSMAG00000012514 ENSSMAG00000028015 ENSSMAG00000037236 ENSSMAG00000012480 ENSSMAG00000012384 ENSSMAG00000012378 znf668 (ENSSMAG00000012376) ENSSMAG00000012369 ENSSMAG00000012321 ENSSMAG00000012275 ENSSMAG00000012171 ENSSMAG00000032480 ENSSMAG00000025266 ENSSMAG00000012109 Otomorpha ANCESTRAL SPECIES 12 ENSGT00940000156947.j ENSGT00940000157803 ENSGT00390000018542.b ENSGT00390000009447 ENSGT00940000155366.a ENSGT00390000001653 ENSGT00950000182957.b.a.b.a.b ENSGT00390000012857 #7 ENSGT00390000012918.d #12 ENSGT00530000069547 #13 ENSGT00390000009084 #14 ENSGT00940000158074 #15 ENSGT00940000161466 #16 ENSGT00940000160498.c #17 ENSGT00940000156355.n.a #18 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT01060000248742 #24 ENSGT00940000154307.B #25 ENSGT00390000001278.a ENSGT00550000074807.c ENSGT00940000164977.b ENSGT01100000263504.a.b.b.a.b ENSGT00940000158822 #27 ENSGT00940000160824 #28 ENSGT00940000163663.B.a #29 ENSGT00950000182979.a.b.b.b.b.i.a #30 ENSGT01100000263632 ENSGT00390000002628 ENSGT00550000075071 #32 ENSGT00940000157696 #31 Otophysi ANCESTRAL SPECIES 34 ENSGT00390000018542.b ENSGT00390000009447 ENSGT00940000155366.a ENSGT00390000001653 ENSGT00950000182957.b.a.b.a.b ENSGT00390000012857 #7 ENSGT00390000012918.d #12 ENSGT00530000069547 #13 ENSGT00390000009084 #14 ENSGT00940000158074 #15 ENSGT00940000161466 #16 ENSGT00940000160498.c #17 ENSGT00940000156355.n.a #18 ENSGT00940000167095.B ENSGT00510000049239.b.b #19 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT01060000248742 #24 ENSGT00940000154307.B #25 ENSGT01100000263504.a.a ENSGT00940000158822 #27 ENSGT00940000176030 ENSGT00940000160824 #28 ENSGT00940000163663.B.a #29 ENSGT00950000182979.a.b.b.b.b.i.a #30 ENSGT01100000263632 ENSGT00390000002628 ENSGT00550000075071 #32 ENSGT00940000157696 #31 ENSGT00390000008825.a.a #33 ENSGT00390000009925.a.k.a #34 Characiphysae ANCESTRAL SPECIES 10 ENSGT00950000182957.b.a.b.a.a ENSGT00390000018542.b ENSGT00390000009447 ENSGT00940000155366.a ENSGT00390000001653 ENSGT00390000012857 #7 ENSGT00390000012918.d #12 ENSGT00530000069547 #13 ENSGT00390000009084 #14 ENSGT00940000158074 #15 ENSGT00940000161466 #16 ENSGT00940000160498.c #17 ENSGT00940000156355.n.a #18 ENSGT00940000167095.B ENSGT00510000049239.b.b #19 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT01060000248742 #24 ENSGT00940000154307.B #25 ENSGT01100000263504.a.a ENSGT00940000158822 #27 ENSGT00940000176030 ENSGT00940000160824 #28 ENSGT00940000163663.B.a #29 ENSGT00950000182979.a.b.b.b.b.i.a #30 ENSGT00940000163474 ENSGT00390000002628 ENSGT00550000075071 #32 ENSGT00940000157696 #31 ENSGT00390000008825.a.a #33 ENSGT00390000009925.a.k.a #34 Characiphysae_b ANCESTRAL SPECIES 1 ENSGT00390000016020 ENSGT00390000018542.b ENSGT00390000009447 ENSGT00940000155366.a ENSGT00390000001653 ENSGT00390000012857 #7 ENSGT00390000012918.d #12 ENSGT00530000069547 #13 ENSGT00390000009084 #14 ENSGT00940000158074 #15 ENSGT00940000161466 #16 ENSGT00940000160498.c #17 ENSGT00940000156355.n.a #18 ENSGT00940000167095.B ENSGT00510000049239.b.b #19 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT01060000248742 #24 ENSGT00940000154307.B #25 ENSGT01100000263504.a.a ENSGT00940000158822 #27 ENSGT00940000160824 #28 ENSGT00940000163663.B.a #29 ENSGT00950000182979.a.b.b.b.b.i.a #30 ENSGT00940000163474 ENSGT00390000002628 ENSGT00550000075071 #32 ENSGT00940000157696 #31 ENSGT00390000008825.a.a #33 ENSGT00390000009925.a.k.a #34 ENSGT00390000015579.a.a.b #36 Characoidei ANCESTRAL SPECIES 62 ENSGT00390000018542.b ENSGT00390000009447 ENSGT00940000155366.a ENSGT00390000001653 ENSGT00390000012857 #7 ENSGT00390000012918.d #12 ENSGT00530000069547.a #13 ENSGT00390000009084 #14 ENSGT00940000158074 #15 ENSGT00940000161466 #16 ENSGT00940000160498.c #17 ENSGT00940000156355.n.a #18 ENSGT00940000167095.B ENSGT00510000049239.b.b #19 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT01060000248742 #24 ENSGT00940000154307.B #25 ENSGT01100000263504.a.b.a.b.a.b ENSGT00940000158822 #27 ENSGT00940000160824 #28 ENSGT00940000163663.B.a #29 ENSGT00950000182979.a.b.b.b.b.i.a #30 ENSGT00390000002628 ENSGT00550000075071 #32 ENSGT00940000157696 #31 ENSGT00390000008825.a.a #33 ENSGT00390000009925.a.k.a #34 ENSGT00390000015579.a.a.b #36 ENSGT00940000156278.re.a #37 Red-bellied piranha MODERN SPECIES 130 litaf (ENSPNAG00000010917) ENSPNAG00000010906 ubfd1 (ENSPNAG00000001459) #7 ENSPNAG00000010877 #12 ENSPNAG00000010848 #13 ENSPNAG00000010797 #13 nsmce1 (ENSPNAG00000010784) #14 kdm8 (ENSPNAG00000010769) #15 hs3st4 (ENSPNAG00000010734) #16 hs3st2 (ENSPNAG00000010709) #17 USP31 (ENSPNAG00000010699) #18 kctd5a (ENSPNAG00000010648) #21 pdpk1a (ENSPNAG00000001415) #20 ENSPNAG00000010563 il21r.1 (ENSPNAG00000010551) #19 ube2ia (ENSPNAG00000010538) #22 BAIAP3 (ENSPNAG00000010517) #23 gpr146 (ENSPNAG00000010485) #24 gper1 (ENSPNAG00000010476) #25 ENSPNAG00000010461 UNKL (ENSPNAG00000010422) #27 IGFALS (ENSPNAG00000010310) #28 Mexicana tetra MODERN SPECIES 71 USP31 (ENSAMXG00000002715) #18 kctd5a (ENSAMXG00000038345) #21 pdpk1a (ENSAMXG00000002744) #20 il21r.2 (ENSAMXG00000032463) ENSAMXG00000003010 ube2ia (ENSAMXG00000041809) #22 BAIAP3 (ENSAMXG00000039125) #23 gper1 (ENSAMXG00000025934) #25 ENSAMXG00000035290 UNKL (ENSAMXG00000007890) #27 IGFALS (ENSAMXG00000025897) #28 shisa9b (ENSAMXG00000029150) #29 ENSAMXG00000043686 MRTFB (ENSAMXG00000017729) #30 snrnp25 (ENSAMXG00000040057) polr3k (ENSAMXG00000039818) #32 cdip1 (ENSAMXG00000037142) #31 ubald1b (ENSAMXG00000043303) #33 mgrn1b (ENSAMXG00000017741) #34 ENSAMXG00000036633 ENSAMXG00000036376 Electric eel MODERN SPECIES snn (ENSEEEG00000000719) litaf (ENSEEEG00000000724) RMI2 (ENSEEEG00000000726) ubfd1 (ENSEEEG00000000733) #7 ENSEEEG00000000749 #12 ENSEEEG00000000769 nsmce1 (ENSEEEG00000000777) #14 kdm8 (ENSEEEG00000000781) #15 hs3st4 (ENSEEEG00000000789) #16 hs3st2 (ENSEEEG00000000792) #17 ENSEEEG00000000797 #18 kctd5a (ENSEEEG00000000803) #21 pdpk1a (ENSEEEG00000000861) #20 ENSEEEG00000001059 il21r.1 (ENSEEEG00000001062) #19 ube2ia (ENSEEEG00000001067) #22 BAIAP3 (ENSEEEG00000001094) #23 gpr146 (ENSEEEG00000001178) #24 gper1 (ENSEEEG00000001179) #25 ENSEEEG00000001181 UNKL (ENSEEEG00000001199) #27 IGFALS (ENSEEEG00000001246) #28 shisa9b (ENSEEEG00000001247) #29 ENSEEEG00000001249 #30 ENSEEEG00000001251 snrnp25 (ENSEEEG00000001253) polr3k (ENSEEEG00000001255) #32 cdip1 (ENSEEEG00000001256) #31 ENSEEEG00000001257 #33 mgrn1b (ENSEEEG00000001261) #34 aanat2 (ENSEEEG00000001267) #36 Channel catfish MODERN SPECIES 16 zc3h7a (ENSIPUG00000019063) snn (ENSIPUG00000019116) litaf (ENSIPUG00000019117) RMI2 (ENSIPUG00000019126) ubfd1 (ENSIPUG00000019132) #7 ENSIPUG00000019149 #12 ENSIPUG00000019161 #13 nsmce1 (ENSIPUG00000019178) #14 kdm8 (ENSIPUG00000019197) #15 hs3st4 (ENSIPUG00000019246) #16 hs3st2 (ENSIPUG00000019256) #17 USP31 (ENSIPUG00000019276) #18 Kctd5 (ENSIPUG00000019332) #21 pdpk1a (ENSIPUG00000019368) #20 il21r (ENSIPUG00000019402) #19 ube2ia (ENSIPUG00000019411) #22 BAIAP3 (ENSIPUG00000019437) #23 gpr146 (ENSIPUG00000019479) #24 gper1 (ENSIPUG00000019483) #25 H33 (ENSIPUG00000019487) unkl (ENSIPUG00000019510) #27 ENSIPUG00000019549 Igfals (ENSIPUG00000019594) #28 shisa9b (ENSIPUG00000019600) #29 ENSIPUG00000019606 #30 ENSIPUG00000019642 snrnp25 (ENSIPUG00000019654) lrrc14b (ENSIPUG00000019665) nkd2l (ENSIPUG00000019668) gatad1 (ENSIPUG00000019694) lypla2 (ENSIPUG00000019714) Cyprinoidei ANCESTRAL SPECIES 56 ENSGT00390000018542.b ENSGT00390000009447 ENSGT00940000155366.a ENSGT00390000001653 ENSGT00950000182957.b.a.b.a.b ENSGT00390000012857 #7 ENSGT00390000012918.d #12 ENSGT00530000069547 #13 ENSGT00390000009084 #14 ENSGT00940000158074 #15 ENSGT00940000161466 #16 ENSGT00940000160498.c #17 ENSGT00940000156355.n.a #18 ENSGT00940000167095.B ENSGT00510000049239.b.b #19 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT01060000248742 #24 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 306 ENSGT00940000157803.p ENSGT00390000018542.b.v ENSGT00390000009447.m ENSGT00940000155366.a.b ENSGT00390000012857.s #7 ENSGT00390000012918.d.a.a #12 ENSGT00530000069547.e #13 ENSGT00390000009084.b #14 ENSGT00940000161466.f #16 ENSGT00940000160498.c.h #17 ENSGT00940000156355.n.a.b #18 ENSGT00940000160374.d.b.b #21 ENSGT00940000155267.t.a #20 ENSGT01000000216982 ENSGT00510000049239.b.b.b #19 ENSGT00550000075088.a.a.c #22 ENSGT00730000110939.a.c.a #23 ENSGT01060000248742.e #24 ENSGT00940000154307.B.f #25 ENSGT00940000158822.d #27 ENSGT00940000160824.b.b #28 ENSGT00940000163663.B.a.a #29 ENSGT00950000182979.a.b.b.b.b.i.a.b #30 ENSGT01100000263632 ENSGT00390000002628.r ENSGT00550000075071.u #32 ENSGT00940000157696.k #31 ENSGT00940000159005.c.a.a.f.a.h.a ENSGT00940000159005.c.a.b.a ENSGT00940000159869.k ENSGT00940000160550.f Goldfish MODERN SPECIES 2602 litaf (ENSCARG00000067724) ubfd1 (ENSCARG00000067694) #7 ENSCARG00000067670 #12 ENSCARG00000067657 #13 ENSCARG00000067605 ENSCARG00000067591 ENSCARG00000067585 hs3st4 (ENSCARG00000067579) #16 hs3st2 (ENSCARG00000067573) #17 USP31 (ENSCARG00000067522) #18 kctd5a (ENSCARG00000067494) #21 ENSCARG00000067489 pdpk1a (ENSCARG00000066507) #20 il21r.2 (ENSCARG00000066402) il21r.1 (ENSCARG00000066385) #19 ube2ia (ENSCARG00000066350) #22 BAIAP3 (ENSCARG00000066331) #23 gpr146 (ENSCARG00000066324) #24 gper1 (ENSCARG00000066321) #25 ENSCARG00000066316 Cyprininae_a ANCESTRAL SPECIES 21 ENSGT00940000156947.j.b ENSGT00940000157803.p ENSGT00390000018542.b.v ENSGT00390000009447.m ENSGT00940000155366.a.b ENSGT00390000012857.s #7 ENSGT00390000012918.d.a.a #12 ENSGT00530000069547.e #13 ENSGT00390000009084.b #14 ENSGT00940000161466.f #16 ENSGT00940000160498.c.h #17 ENSGT00940000156355.n.a.b #18 ENSGT00940000160374.d.b.b #21 ENSGT00940000155267.t.a #20 ENSGT00510000049239.b.b.b #19 ENSGT00550000075088.a.a.c #22 ENSGT00730000110939.a.c.a #23 ENSGT01060000248742.e #24 ENSGT00940000154307.B.f #25 ENSGT01100000263504.a.b.a.b.a.b.`b.b ENSGT00940000158822.d #27 ENSGT00940000160824.b.b #28 ENSGT00940000163663.B.a.a #29 ENSGT00950000182979.a.b.b.b.b.i.a.b #30 ENSGT01100000263632 ENSGT00390000002628.r ENSGT00550000075071.u #32 ENSGT00940000157696.k #31 ENSGT00940000159005.c.a.a.f.a.h.a ENSGT00940000159005.c.a.b.a ENSGT00940000159869.k Common carp reference MODERN SPECIES 1 pla2g10 (ENSCCRG00000079571) zc3h7a (ENSCCRG00000031676) ENSCCRG00000073969 litaf (ENSCCRG00000069346) ubfd1 (ENSCCRG00000020114) #7 ENSCCRG00000055128 #12 ENSCCRG00000058406 #13 nsmce1 (ENSCCRG00000061564) #14 hs3st4 (ENSCCRG00000065545) #16 hs3st2 (ENSCCRG00000069208) #17 ENSCCRG00000026057 #18 kctd5a (ENSCCRG00000080833) #21 pdpk1a (ENSCCRG00000027170) #20 ENSCCRG00000065940 ENSCCRG00000044731 ube2ia (ENSCCRG00000005558) #22 il21r.1 (ENSCCRG00000078214) #19 ENSCCRG00000006253 #23 gpr146 (ENSCCRG00000069946) #24 gper1 (ENSCCRG00000069602) #25 ENSCCRG00000059264 h3f3a (ENSCCRG00000048615) ENSCCRG00000073473 #27 ENSCCRG00000076152 #28 shisa9b (ENSCCRG00000054191) #29 ENSCCRG00000027615 #30 ENSCCRG00000062127 polr3k (ENSCCRG00000068521) #32 cdip1 (ENSCCRG00000061461) #31 ENSCCRG00000007627 ENSCCRG00000019358 Golden-line barbel MODERN SPECIES 394 hs3st4 (ENSSGRG00000040726) #16 hs3st2 (ENSSGRG00000040725) #17 USP31 (ENSSGRG00000040724) #18 pdpk1a (ENSSGRG00000040712) #20 ube2ia (ENSSGRG00000040628) #22 BAIAP3 (ENSSGRG00000040610) #23 ENSSGRG00000040607 il21r.1 (ENSSGRG00000040606) #19 gpr146 (ENSSGRG00000040604) #24 ENSSGRG00000040603 ENSSGRG00000040551 #27 ENSSGRG00000040542 #28 IGFALS (ENSSGRG00000040541) #28 Cyprininae ANCESTRAL SPECIES 301 ENSGT00940000155366.a.a ENSGT00390000001653 ENSGT00950000182957.b.a.b.a.b ENSGT00390000012857.t #7 ENSGT00390000012918.d.a.b #12 ENSGT00530000069547.f #13 ENSGT00390000009084.a #14 ENSGT00940000158074 #15 ENSGT00940000161466.e #16 ENSGT00940000160498.c.g #17 ENSGT00940000156355.n.a.a #18 ENSGT00940000160374.d.b.a #21 ENSGT00940000155267.t.b #20 ENSGT00940000167095.B ENSGT00510000049239.b.b.a #19 ENSGT00550000075088.a.a.d #22 ENSGT00730000110939.a.c.b #23 ENSGT01060000248742.f #24 ENSGT00940000154307.B.e #25 ENSGT01100000263504.a.b.a.b.a.a ENSGT01100000263504.a.b.a.a ENSGT00940000158822.c #27 ENSGT00940000176030 ENSGT00940000160824.b.a.a #28 Goldfish MODERN SPECIES 22 snn (ENSCARG00000008224) litaf (ENSCARG00000052916) RMI2 (ENSCARG00000052908) ENSCARG00000052834 ubfd1 (ENSCARG00000052763) #7 ENSCARG00000052744 #13 nsmce1 (ENSCARG00000052726) #14 kdm8 (ENSCARG00000052684) #15 hs3st4 (ENSCARG00000052676) #16 hs3st2 (ENSCARG00000052665) #17 USP31 (ENSCARG00000052613) #18 ENSCARG00000052588 #21 pdpk1a (ENSCARG00000052372) #20 ENSCARG00000052335 il21r.1 (ENSCARG00000052317) #19 ube2ia (ENSCARG00000052232) #22 BAIAP3 (ENSCARG00000052185) #23 gpr146 (ENSCARG00000052175) #24 gper1 (ENSCARG00000052169) #25 ENSCARG00000052158 ENSCARG00000051240 #27 ENSCARG00000051149 ENSCARG00000051125 #28 shisa9b (ENSCARG00000051092) #29 TYK2 (ENSCARG00000050705) raver1 (ENSCARG00000050554) PDE4A (ENSCARG00000049885) prkcsh (ENSCARG00000049619) elavl3 (ENSCARG00000049512) DOCK6 (ENSCARG00000047022) kank2 (ENSCARG00000046907) Cyprininae_a ANCESTRAL SPECIES 224 ENSGT00940000155366.a.a ENSGT00390000001653 ENSGT00950000182957.b.a.b.a.b ENSGT00390000012857.t #7 ENSGT00390000012918.d.a.b #12 ENSGT00530000069547.f #13 ENSGT00390000009084.a #14 ENSGT00940000158074.e #15 ENSGT00940000161466.e #16 ENSGT00940000160498.c.g #17 ENSGT00940000156355.n.a.a #18 ENSGT00940000160374.d.b.a #21 ENSGT00940000155267.t.b #20 ENSGT00940000167095.B ENSGT00510000049239.b.b.a #19 ENSGT00550000075088.a.a.d #22 ENSGT00730000110939.a.c.b #23 ENSGT01060000248742.f #24 ENSGT00940000154307.B.e #25 ENSGT01100000263504.a.b.a.b.a.a ENSGT00940000158822.c #27 ENSGT00940000176030 ENSGT00940000160824.a #28 ENSGT00940000163663.B.a.b #29 ENSGT00950000182979.a.b.b.b.b.i.a.a #30 ENSGT00940000159869.l ENSGT00940000160550.e ENSGT00940000159788.a.a.a ENSGT00510000047770.c.a.a ENSGT00940000160389.c.a ENSGT00940000159313.d Common carp reference MODERN SPECIES 3 ENSCCRG00000003847 ubfd1 (ENSCCRG00000003858) #7 ENSCCRG00000044310 ENSCCRG00000066978 ENSCCRG00000020110 #12 ENSCCRG00000076026 #13 nsmce1 (ENSCCRG00000002066) #14 kdm8 (ENSCCRG00000070522) #15 hs3st4 (ENSCCRG00000053736) #16 hs3st2 (ENSCCRG00000006265) #17 ENSCCRG00000060625 #18 kctd5a (ENSCCRG00000028838) #21 pdpk1a (ENSCCRG00000005652) #20 il21r.2 (ENSCCRG00000075831) il21r.1 (ENSCCRG00000079035) #19 ube2ia (ENSCCRG00000080055) #22 ENSCCRG00000011149 #23 gpr146 (ENSCCRG00000058244) #24 gper1 (ENSCCRG00000082453) #25 ENSCCRG00000053829 ENSCCRG00000048566 #27 ENSCCRG00000011140 ENSCCRG00000061778 #28 shisa9b (ENSCCRG00000037221) #29 ENSCCRG00000065133 #30 polr3k (ENSCCRG00000079852) #32 cdip1 (ENSCCRG00000066219) #31 ENSCCRG00000027674 ENSCCRG00000027680 TYK2 (ENSCCRG00000027754) raver1 (ENSCCRG00000030357) Golden-line barbel MODERN SPECIES 1023 USP31 (ENSSGRG00000021792) #18 kctd5a (ENSSGRG00000021791) #21 pdpk1a (ENSSGRG00000020617) #20 il21r.2 (ENSSGRG00000020574) il21r.1 (ENSSGRG00000020571) #19 ube2ia (ENSSGRG00000020438) #22 gpr146 (ENSSGRG00000020431) #24 gper1 (ENSSGRG00000020430) #25 ENSSGRG00000020429 UNKL (ENSSGRG00000020086) #27 IGFALS (ENSSGRG00000020077) #28 Zebrafish MODERN SPECIES 18 ENSDARG00000103137 ENSDARG00000098949 ubfd1 (ENSDARG00000102827) #7 ENSDARG00000104568 #12 ENSDARG00000116052 il4r.1 (ENSDARG00000102583) nsmce1 (ENSDARG00000098780) #14 kdm8 (ENSDARG00000102512) #15 hs3st4 (ENSDARG00000052648) #16 hs3st2 (ENSDARG00000059616) #17 USP31 (ENSDARG00000074017) #18 kctd5a (ENSDARG00000015722) #21 pdpk1a (ENSDARG00000062304) #20 il21r.2 (ENSDARG00000078649) il21r.1 (ENSDARG00000069961) #19 ube2ia (ENSDARG00000052649) #22 BAIAP3 (ENSDARG00000079264) #23 gpr146 (ENSDARG00000059610) #24 gper1 (ENSDARG00000074661) #25 h3f3a (ENSDARG00000020504) UNKL (ENSDARG00000037838) #27 ENSDARG00000097600 IGFALS (ENSDARG00000037836) #28 shisa9b (ENSDARG00000052642) #29 ENSDARG00000076867 #30 snrnp25 (ENSDARG00000020363) polr3k (ENSDARG00000037835) #32 cdip1 (ENSDARG00000076118) #31 sc:d0202 (ENSDARG00000078180) si:ch211-66e2.3 (ENSDARG00000078824) ENSDARG00000091579 Clupeiformes ANCESTRAL SPECIES 14 ENSGT00390000009084 #14 ENSGT00940000158074 #15 ENSGT00940000161466 #16 ENSGT00940000160498.c #17 ENSGT00940000156355.n.a #18 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT01060000248742 #24 ENSGT00940000154307.B #25 ENSGT00940000158822 #27 ENSGT00940000160824 #28 ENSGT00940000163663.B.a #29 ENSGT00950000182979.a.b.b.b.b.i.a #30 ENSGT00940000163474 ENSGT00390000002628 ENSGT00550000075071 #32 ENSGT00940000157696 #31 ENSGT00390000008825.a.b #33 ENSGT00390000009925.a.k.a #34 ENSGT00940000164514.a #35 ENSGT00390000015579.a.a.b #36 Denticle herring MODERN SPECIES 17 ENSDCDG00000003500 stat5a (ENSDCDG00000003467) stat3 (ENSDCDG00000003380) CAVIN1 (ENSDCDG00000003335) atp6v0a1a (ENSDCDG00000003169) stk17al (ENSDCDG00000002995) nsmce1 (ENSDCDG00000002957) #14 kdm8 (ENSDCDG00000002924) #15 ENSDCDG00000002908 hs3st4 (ENSDCDG00000002895) #16 ENSDCDG00000031710 hs3st2 (ENSDCDG00000031705) #17 USP31 (ENSDCDG00000031703) #18 kctd5a (ENSDCDG00000031699) #21 ENSDCDG00000031693 ube2ia (ENSDCDG00000031680) #22 BAIAP3 (ENSDCDG00000031673) #23 gpr146 (ENSDCDG00000031669) #24 gper1 (ENSDCDG00000031667) #25 h3f3a (ENSDCDG00000031665) IGFALS (ENSDCDG00000031661) #28 UNKL (ENSDCDG00000031625) #27 shisa9b (ENSDCDG00000031617) #29 ENSDCDG00000031611 MRTFB (ENSDCDG00000031603) #30 ENSDCDG00000031597 snrnp25 (ENSDCDG00000031593) polr3k (ENSDCDG00000031588) #32 cdip1 (ENSDCDG00000031586) #31 ubald1b (ENSDCDG00000031584) #33 mgrn1b (ENSDCDG00000031557) #34 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 305 ENSGT00390000001653 ENSGT00390000012857 #7 ENSGT00390000012918.d #12 ENSGT00940000159613 ENSGT00530000069547 #13 ENSGT00390000009084 #14 ENSGT00940000158074 #15 ENSGT00940000161466.b #16 ENSGT00940000167095.B ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a.a #22 ENSGT00730000110939.a.g #23 ENSGT01100000265049 ENSGT00940000154307.B.a #25 ENSGT01100000263504.a.b.a.a ENSGT00940000158822.g #27 ENSGT00940000160824 #28 Asian bonytongue MODERN SPECIES 20 mmd (ENSSFOG00015029311) pepd (ENSSFOG00015004207) ENSSFOG00015032383 litaf (ENSSFOG00015018562) ENSSFOG00015018632 ubfd1 (ENSSFOG00015018639) #7 ENSSFOG00015018663 #12 ENSSFOG00015018696 ENSSFOG00015032270 #13 nsmce1 (ENSSFOG00015018821) #14 kdm8 (ENSSFOG00015018842) #15 hs3st4 (ENSSFOG00015019347) #16 ENSSFOG00015027735 #19 ENSSFOG00015030849 ENSSFOG00015018884 ube2ia (ENSSFOG00015018892) #22 ENSSFOG00015018924 #23 IGFALS (ENSSFOG00015018942) #28 rhot2 (ENSSFOG00015019007) NLRC3 (ENSSFOG00015019088) NME2 (ENSSFOG00015019139) UTP18 (ENSSFOG00015019158) si:dkeyp-113d7.1 (ENSSFOG00015019168) ENSSFOG00015019171 stx1b (ENSSFOG00015019181) cbx2 (ENSSFOG00015029247) ENSSFOG00015019209 aimp2 (ENSSFOG00015019233) idh3b (ENSSFOG00015019246) CHST8 (ENSSFOG00015028393) KCTD15 (ENSSFOG00015031424) P. kingsleyae MODERN SPECIES 156 ENSPKIG00000001459 ENSPKIG00000001491 #13 nsmce1 (ENSPKIG00000001520) #14 kdm8 (ENSPKIG00000001559) #15 ENSPKIG00000001582 ENSPKIG00000001608 hs3st4 (ENSPKIG00000001629) #16 ENSPKIG00000001639 hs3st2 (ENSPKIG00000001650) #17 ENSPKIG00000001663 USP31 (ENSPKIG00000001681) #18 ENSPKIG00000001727 pdpk1a (ENSPKIG00000001776) #20 ENSPKIG00000001822 ENSPKIG00000001840 #21 ube2ia (ENSPKIG00000001867) #22 BAIAP3 (ENSPKIG00000001914) #23 ENSPKIG00000001974 gper1 (ENSPKIG00000001986) #25 ENSPKIG00000001999 ENSPKIG00000002015 ENSPKIG00000002029 UNKL (ENSPKIG00000002101) #27 IGFALS (ENSPKIG00000002260) #28 NLRC3 (ENSPKIG00000002323) rhot2 (ENSPKIG00000002446) ENSPKIG00000002512 Osteoglossiformes ANCESTRAL SPECIES 87 ENSGT00550000075088.a.a.b #22 ENSGT00730000110939.a.h #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT01060000248742 #24 ENSGT00390000006068 ENSGT00940000154307.B.b #25 ENSGT00390000017838 ENSGT00510000049652 ENSGT01100000263504.a.a ENSGT00940000158822.h #27 ENSGT00390000000306 ENSGT00940000156610 ENSGT00940000159396 ENSGT00530000064671 ENSGT00940000160651 Asian bonytongue MODERN SPECIES 12 ENSSFOG00015003294 fbxl18 (ENSSFOG00015003278) TNRC18 (ENSSFOG00015003261) SLC29A4 (ENSSFOG00015003203) ENSSFOG00015003168 ENSSFOG00015003116 ears2 (ENSSFOG00015019361) HS3ST4 (ENSSFOG00015024007) #16 hs3st2 (ENSSFOG00015005525) #17 USP31 (ENSSFOG00015019296) #18 cog7 (ENSSFOG00015019251) ENSSFOG00015019229 ENSSFOG00015019215 pdpk1b (ENSSFOG00015019160) #20 kctd5a (ENSSFOG00015027058) #21 ube2ia (ENSSFOG00015019101) #22 ENSSFOG00015025841 #23 tsr3 (ENSSFOG00015019056) gnptg (ENSSFOG00015019028) gpr146 (ENSSFOG00015033359) #24 ENSSFOG00015028755 gper1 (ENSSFOG00015019010) #25 ENSSFOG00015018997 ENSSFOG00015018961 ENSSFOG00015025053 UNKL (ENSSFOG00015018904) #27 zgc:112185 (ENSSFOG00015018878) anks3 (ENSSFOG00015018814) wdr24 (ENSSFOG00015018783) zgc:112496 (ENSSFOG00015018773) ENSSFOG00015026462 P. kingsleyae MODERN SPECIES 1372 ube2ia (ENSPKIG00000007503) #22 Spotted gar DUPLICATION Spotted gar MODERN SPECIES 651 GGA2 (ENSLOCG00000004053) ENSLOCG00000004033 #13 ENSLOCG00000004012 #13 nsmce1 (ENSLOCG00000004001) #14 kdm8 (ENSLOCG00000003965) #15 hs3st4 (ENSLOCG00000003950) #16 ENSLOCG00000003934 hs3st2 (ENSLOCG00000003905) #17 USP31 (ENSLOCG00000003884) #18 cog7 (ENSLOCG00000003874) ENSLOCG00000003855 ENSLOCG00000003839 ENSLOCG00000003825 pdpk1a (ENSLOCG00000003794) #20 kctd5a (ENSLOCG00000003769) #21 ube2ia (ENSLOCG00000003753) #22 BAIAP3 (ENSLOCG00000003707) #23 tsr3 (ENSLOCG00000003693) gnptg (ENSLOCG00000003683) UNKL (ENSLOCG00000003648) #27 ENSLOCG00000003636 UQCC4 (ENSLOCG00000003623) gper1 (ENSLOCG00000018100) #25 ENSLOCG00000003612 gpr146 (ENSLOCG00000018099) #24 ENSLOCG00000003601 zgc:112185 (ENSLOCG00000003583) ENSLOCG00000003569 anks3 (ENSLOCG00000003543) IGFALS (ENSLOCG00000003531) #28 wdr24 (ENSLOCG00000003515) Spotted gar MODERN SPECIES 650 ENSLOCG00000011018 prkag3b (ENSLOCG00000011025) nrp2a (ENSLOCG00000011036) ENSLOCG00000011058 cpo (ENSLOCG00000011079) ENSLOCG00000011089 ENSLOCG00000011098 ENSLOCG00000017844 atf4a (ENSLOCG00000011103) mief1 (ENSLOCG00000011112) ENSLOCG00000011119 ENSLOCG00000011127 ENSLOCG00000011136 TST (ENSLOCG00000011138) ENSLOCG00000011143 ENSLOCG00000011151 #22 ENSLOCG00000011158 il2rb (ENSLOCG00000011165) ##19 TMPRSS6 (ENSLOCG00000011175) C1QTNF6 (ENSLOCG00000011192) mgat3a (ENSLOCG00000011196) ENSLOCG00000011203 rpl3 (ENSLOCG00000011210) IFT27 (ENSLOCG00000011228) cacng2a (ENSLOCG00000011236) ENSLOCG00000011243 ENSLOCG00000011247 ENSLOCG00000011255 mfng (ENSLOCG00000011263) ELFN2 (ENSLOCG00000011273) sgsm3 (ENSLOCG00000011278) Reedfish MODERN SPECIES 2 GGA2 (ENSECRG00000012131) ENSECRG00000012163 nsmce1 (ENSECRG00000012188) #14 kdm8 (ENSECRG00000012206) #15 hs3st4 (ENSECRG00000012233) #16 ENSECRG00000012249 hs3st2 (ENSECRG00000012262) #17 USP31 (ENSECRG00000012280) #18 SCNN1G (ENSECRG00000012321) SCNN1B (ENSECRG00000012349) cog7 (ENSECRG00000012374) ENSECRG00000012397 ENSECRG00000012408 pdpk1a (ENSECRG00000012435) #20 kctd5a (ENSECRG00000012480) #21 ube2ia (ENSECRG00000012509) #22 BAIAP3 (ENSECRG00000012531) #23 tsr3 (ENSECRG00000012580) gnptg (ENSECRG00000012597) UNKL (ENSECRG00000012639) #27 ENSECRG00000012697 SDK1 (ENSECRG00000012767) CARD11 (ENSECRG00000012839) Sarcopterygii ANCESTRAL SPECIES 285 ENSGT00510000048783 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT01100000263504.a.b.a.b.a.a ENSGT00510000049652 ENSGT00390000006068 ENSGT00390000017838 ENSGT00940000154307.B #25 ENSGT01030000234518.B.b Coelacanth MODERN SPECIES 2100 PDPK1 (ENSLACG00000002897) #20 KCTD5 (ENSLACG00000004959) #21 ube2ia (ENSLACG00000007738) #22 Tetrapoda ANCESTRAL SPECIES 24 ENSGT00510000048783 ENSGT00940000168576 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT01100000263504.a.b.a.b.a.a ENSGT00510000049652 ENSGT00940000154307.B #25 ENSGT00390000006068 ENSGT01030000234888 ENSGT00390000017838 ENSGT00940000161956 ENSGT00940000162649 ENSGT00390000016895 ENSGT00940000155698.A ENSGT00390000015750 Anura ANCESTRAL SPECIES 219 ENSGT00510000049182 ENSGT00390000009084 #14 ENSGT00510000048783 ENSGT00940000168576 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000162649 ENSGT00940000161956 ENSGT00390000017838 ENSGT01030000234888 ENSGT00390000006068 Frog MODERN SPECIES 9 tmem184a (ENSXETG00000018120) mafk (ENSXETG00000048883) ints1 (ENSXETG00000018110) micall2 (ENSXETG00000018105) ENSXETG00000047620 ENSXETG00000044738 uncx (ENSXETG00000004021) drg2 (ENSXETG00000004022) il4r (ENSXETG00000040733) ENSXETG00000041770 ENSXETG00000039272 nsmce1 (ENSXETG00000045416) #14 il21r (ENSXETG00000048851) pdpk1 (ENSXETG00000004025) #20 kctd5 (ENSXETG00000041469) #21 ube2i (ENSXETG00000004027) #22 baiap3 (ENSXETG00000021585) #23 tsr3 (ENSXETG00000021589) gnptg (ENSXETG00000021590) gpr146 (ENSXETG00000039072) ENSXETG00000043623 gper1 (ENSXETG00000021597) #25 ENSXETG00000043742 c16orf91 (ENSXETG00000019929) h3f3b (ENSXETG00000012575) unkl (ENSXETG00000043178) #27 cyp2w1 (ENSXETG00000047999) adap1 (ENSXETG00000044491) get4 (ENSXETG00000021638) sun1 (ENSXETG00000021642) dnaaf5 (ENSXETG00000021643) Leishan spiny toad MODERN SPECIES 10 FOXL3 (ENSLLEG00000021895) PDGFA (ENSLLEG00000021948) PRKAR1B (ENSLLEG00000022095) DNAAF5 (ENSLLEG00000022272) ENSLLEG00000022412 GET4 (ENSLLEG00000022577) ENSLLEG00000023231 GPER1 (ENSLLEG00000026262) #25 ENSLLEG00000026322 ENSLLEG00000026346 UNKL (ENSLLEG00000026423) #27 ENSLLEG00000026726 ENSLLEG00000026874 PDPK1 (ENSLLEG00000026951) #20 KCTD5 (ENSLLEG00000027284) #21 UBE2I (ENSLLEG00000027381) #22 BAIAP3 (ENSLLEG00000027426) #23 ENSLLEG00000027566 ENSLLEG00000027577 TSR3 (ENSLLEG00000027588) GNPTG (ENSLLEG00000027612) ENSLLEG00000027673 ENSLLEG00000027686 ENSLLEG00000027699 ENSLLEG00000027779 ENSLLEG00000028218 NSMCE1 (ENSLLEG00000028255) #14 ENSLLEG00000028293 ENSLLEG00000028391 UNCX (ENSLLEG00000028411) MICALL2 (ENSLLEG00000028456) Amniota ANCESTRAL SPECIES 11 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00940000168576 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 Sauria ANCESTRAL SPECIES 12 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00940000168576 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT00510000049652 ENSGT00940000158822 #27 Archelosauria ANCESTRAL SPECIES 12 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 ENSGT00510000049652 ENSGT00940000158822 #27 Archosauria ANCESTRAL SPECIES 8 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 ENSGT00940000158822 #27 Aves ANCESTRAL SPECIES 11 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 ENSGT00940000158822 #27 Neognathae ANCESTRAL SPECIES 10 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 ENSGT00940000158822 #27 Neognathae_b ANCESTRAL SPECIES 12 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 ENSGT00940000158822 #27 Neognathae_c ANCESTRAL SPECIES 14 ENSGT00390000012857 #7 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 ENSGT00940000158822 #27 Golden eagle MODERN SPECIES 17 ERN2 (ENSACCG00020012122) UBFD1 (ENSACCG00020011746) #7 EARS2 (ENSACCG00020011700) GGA2 (ENSACCG00020011651) COG7 (ENSACCG00020011600) SCNN1B (ENSACCG00020011476) SCNN1G (ENSACCG00020011384) USP31 (ENSACCG00020011365) #18 HS3ST2 (ENSACCG00020011349) #17 HS3ST4 (ENSACCG00020011341) #16 KDM8 (ENSACCG00020011329) #15 NSMCE1 (ENSACCG00020011315) #14 ENSACCG00020011288 PDPK1 (ENSACCG00020011250) #20 KCTD5 (ENSACCG00020011222) #21 UBE2I (ENSACCG00020011204) #22 TSR3 (ENSACCG00020011190) GNPTG (ENSACCG00020011185) ENSACCG00020011177 UNKL (ENSACCG00020011171) #27 Kakapo MODERN SPECIES 21 GGA2 (ENSSHBG00005020335) COG7 (ENSSHBG00005020339) SCNN1B (ENSSHBG00005020344) SCNN1G (ENSSHBG00005020352) ENSSHBG00005020360 #18 ENSSHBG00005020367 #18 HS3ST2 (ENSSHBG00005020373) #17 HS3ST4 (ENSSHBG00005020376) #16 ENSSHBG00005020383 KDM8 (ENSSHBG00005020393) #15 NSMCE1 (ENSSHBG00005020395) #14 ENSSHBG00005020397 IL21R (ENSSHBG00005020402) PDPK1 (ENSSHBG00005020408) #20 KCTD5 (ENSSHBG00005020421) #21 UBE2I (ENSSHBG00005020430) #22 TSR3 (ENSSHBG00005020436) GNPTG (ENSSHBG00005020445) ENSSHBG00005020453 UNKL (ENSSHBG00005020471) #27 ENSSHBG00005020491 Passeriformes ANCESTRAL SPECIES 11 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 Great tit MODERN SPECIES 5 ERN2 (ENSPMJG00000000442) UBFD1 (ENSPMJG00000000496) #7 EARS2 (ENSPMJG00000000527) GGA2 (ENSPMJG00000000545) COG7 (ENSPMJG00000000594) SCNN1B (ENSPMJG00000000612) SCNN1G (ENSPMJG00000000627) USP31 (ENSPMJG00000000653) #18 HS3ST2 (ENSPMJG00000000683) #17 HS3ST4 (ENSPMJG00000000719) #16 NSMCE1 (ENSPMJG00000000727) #14 ENSPMJG00000000737 ENSPMJG00000000743 PDPK1 (ENSPMJG00000000752) #20 KCTD5 (ENSPMJG00000000773) #21 UBE2I (ENSPMJG00000000779) #22 TSR3 (ENSPMJG00000000790) GNPTG (ENSPMJG00000000798) Passeriformes_d ANCESTRAL SPECIES 11 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 Flycatcher MODERN SPECIES 5 BMERB1 (ENSFALG00000028346) COG7 (ENSFALG00000014060) SCNN1B (ENSFALG00000014061) SCNN1G (ENSFALG00000014062) USP31 (ENSFALG00000014063) #18 ENSFALG00000025430 ENSFALG00000023649 HS3ST4 (ENSFALG00000025398) #16 KDM8 (ENSFALG00000014066) #15 NSMCE1 (ENSFALG00000014067) #14 ENSFALG00000014068 IL21R (ENSFALG00000025702) ENSFALG00000027865 ENSFALG00000014071 #20 ENSFALG00000014073 #21 UBE2I (ENSFALG00000014074) #22 ENSFALG00000014075 GNPTG (ENSFALG00000014076) Passeriformes_g ANCESTRAL SPECIES 12 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 Passeroidea ANCESTRAL SPECIES 11 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 Common canary MODERN SPECIES 17 ERN2 (ENSSCAG00000003322) UBFD1 (ENSSCAG00000003308) #7 EARS2 (ENSSCAG00000003289) GGA2 (ENSSCAG00000003272) COG7 (ENSSCAG00000003068) SCNN1B (ENSSCAG00000003018) SCNN1G (ENSSCAG00000003010) USP31 (ENSSCAG00000003003) #18 HS3ST2 (ENSSCAG00000002998) #17 HS3ST4 (ENSSCAG00000002997) #16 NSMCE1 (ENSSCAG00000002987) #14 ENSSCAG00000002982 IL21R (ENSSCAG00000002974) ENSSCAG00000002971 PDPK1 (ENSSCAG00000002967) #20 UBE2I (ENSSCAG00000002963) #22 TSR3 (ENSSCAG00000002960) GNPTG (ENSSCAG00000002947) ENSSCAG00000002945 Zebra finch MODERN SPECIES 5 CCP110 (ENSTGUG00000009379) GDE1 (ENSTGUG00000009391) TMC5 (ENSTGUG00000009393) TMC7 (ENSTGUG00000009411) COQ7 (ENSTGUG00000009425) ITPRIPL2 (ENSTGUG00000009435) SYT17 (ENSTGUG00000009436) CLEC19A (ENSTGUG00000009447) SMG1 (ENSTGUG00000009449) KDM8 (ENSTGUG00000009477) #15 NSMCE1 (ENSTGUG00000009495) #14 ENSTGUG00000009509 IL21R (ENSTGUG00000009519) PDPK1 (ENSTGUG00000009532) #20 KCTD5 (ENSTGUG00000027067) #21 UBE2I (ENSTGUG00000009577) #22 TSR3 (ENSTGUG00000009587) GNPTG (ENSTGUG00000009589) ENSTGUG00000025921 Medium ground finch MODERN SPECIES 102 GGA2 (ENSGFOG00000006551) COG7 (ENSGFOG00000006626) SCNN1B (ENSGFOG00000006650) SCNN1G (ENSGFOG00000007141) USP31 (ENSGFOG00000007158) #18 ENSGFOG00000007200 HS3ST2 (ENSGFOG00000007205) #17 HS3ST4 (ENSGFOG00000007208) #16 ENSGFOG00000007214 KDM8 (ENSGFOG00000007218) #15 NSMCE1 (ENSGFOG00000007238) #14 ENSGFOG00000007242 IL21R (ENSGFOG00000007252) ENSGFOG00000007255 PDPK1 (ENSGFOG00000007260) #20 UBE2I (ENSGFOG00000007266) #22 TSR3 (ENSGFOG00000007280) GNPTG (ENSGFOG00000007299) ENSGFOG00000007312 Galloanserae ANCESTRAL SPECIES 9 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 ENSGT00940000158822 #27 Anatidae ANCESTRAL SPECIES 7 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 ENSGT00940000158822 #27 Duck MODERN SPECIES 1213 KCTD5 (ENSAPLG00000001530) #21 UBE2I (ENSAPLG00000016117) #22 TSR3 (ENSAPLG00000016165) GNPTG (ENSAPLG00000016179) ENSAPLG00000016186 #27 ENSAPLG00000030000 Pink-footed goose MODERN SPECIES 223 EARS2 (ENSABRG00000021419) GGA2 (ENSABRG00000021423) COG7 (ENSABRG00000021424) SCNN1B (ENSABRG00000021428) SCNN1G (ENSABRG00000021429) USP31 (ENSABRG00000021436) #18 HS3ST2 (ENSABRG00000021443) #17 ENSABRG00000021449 HS3ST4 (ENSABRG00000021458) #16 KDM8 (ENSABRG00000021461) #15 NSMCE1 (ENSABRG00000021468) #14 ENSABRG00000021476 IL21R (ENSABRG00000021482) PDPK1 (ENSABRG00000021519) #20 KCTD5 (ENSABRG00000021606) #21 UBE2I (ENSABRG00000021624) #22 TSR3 (ENSABRG00000021625) GNPTG (ENSABRG00000021628) ENSABRG00000021630 UNKL (ENSABRG00000021633) #27 Phasianidae ANCESTRAL SPECIES 10 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 ENSGT00940000158822 #27 ENSGT00440000038745.b ENSGT00390000002393 ENSGT00390000000111.b.b ENSGT00940000155421.b ENSGT00390000007773 ENSGT00940000160271.a.a ENSGT00940000157145 ENSGT00390000000089 ENSGT00940000157381 ENSGT00950000183198.d ENSGT00940000154937 Japanese quail MODERN SPECIES 5 UBFD1 (ENSCJPG00005010239) #7 EARS2 (ENSCJPG00005010240) GGA2 (ENSCJPG00005010241) COG7 (ENSCJPG00005010242) SCNN1B (ENSCJPG00005010243) SCNN1G (ENSCJPG00005010244) USP31 (ENSCJPG00005010245) #18 HS3ST2 (ENSCJPG00005010246) #17 HS3ST4 (ENSCJPG00005010247) #16 KDM8 (ENSCJPG00005010249) #15 NSMCE1 (ENSCJPG00005010250) #14 ENSCJPG00005010251 IL21R (ENSCJPG00005010252) PDPK1 (ENSCJPG00005010254) #20 KCTD5 (ENSCJPG00005010255) #21 UBE2I (ENSCJPG00005010256) #22 TSR3 (ENSCJPG00005010257) GNPTG (ENSCJPG00005010258) ENSCJPG00005010259 UNKL (ENSCJPG00005010260) #27 BMERB1 (ENSCJPG00005010261) MARF1 (ENSCJPG00005010262) NDE1 (ENSCJPG00005010263) MYH11 (ENSCJPG00005010266) CEP20 (ENSCJPG00005015232) ABCC1 (ENSCJPG00005015233) ABCC6 (ENSCJPG00005015234) ENSCJPG00005015275 XYLT1 (ENSCJPG00005015280) RPS15A (ENSCJPG00005015285) ARL6IP1 (ENSCJPG00005015286) Phasianidae_b ANCESTRAL SPECIES 10 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00440000038745.b ENSGT00390000002393 ENSGT00390000000111.b.b ENSGT00940000155421.b ENSGT00390000007773 ENSGT00940000160271.b ENSGT00940000160271.a.a ENSGT00940000157145 ENSGT00390000000089 ENSGT00940000157381 ENSGT00950000183198.d ENSGT00940000154937 Chicken MODERN SPECIES 5 EARS2 (ENSGALG00010017219) GGA2 (ENSGALG00010017246) COG7 (ENSGALG00010017263) SCNN1B (ENSGALG00010017490) SCNN1G (ENSGALG00010017296) USP31 (ENSGALG00010017299) #18 HS3ST2 (ENSGALG00010017305) #17 HS3ST4 (ENSGALG00010017315) #16 KDM8 (ENSGALG00010017334) #15 NSMCE1 (ENSGALG00010017356) #14 ENSGALG00010017372 IL21R (ENSGALG00010017285) ENSGALG00010016976 PDPK1 (ENSGALG00010020316) #20 ENSGALG00010023063 #21 UBE2I (ENSGALG00010020405) #22 TSR3 (ENSGALG00010020415) GNPTG (ENSGALG00010020433) UNKL (ENSGALG00010020533) #27 BMERB1 (ENSGALG00010020544) MARF1 (ENSGALG00010020620) NDE1 (ENSGALG00010020635) MYH11 (ENSGALG00010020649) FOPNL (ENSGALG00010020725) ABCC1 (ENSGALG00010020745) ABCC6 (ENSGALG00010020803) ENSGALG00010020827 XYLT1 (ENSGALG00010020878) RPS15A (ENSGALG00010020890) ARL6IP1 (ENSGALG00010020916) SMG1 (ENSGALG00010020938) Turkey MODERN SPECIES 7 ENSMGAG00000007732 ENSMGAG00000007711 ENSMGAG00000007657 ENSMGAG00000007582 ENSMGAG00000007175 ENSMGAG00000007379 ENSMGAG00000019369 ENSMGAG00000007169 ENSMGAG00000006993 ENSMGAG00000007022 MARF1 (ENSMGAG00000006956) ENSMGAG00000006954 ENSMGAG00000006920 #27 ENSMGAG00000022923 GNPTG (ENSMGAG00000006901) ENSMGAG00000006875 #22 ENSMGAG00000006894 ENSMGAG00000006865 #21 ENSMGAG00000006838 #20 ENSMGAG00000006813 ENSMGAG00000006820 ENSMGAG00000006834 ENSMGAG00000019655 #15 ENSMGAG00000006801 #14 HS3ST4 (ENSMGAG00000006789) #16 ENSMGAG00000006765 #18 ENSMGAG00000018359 #17 SCNN1G (ENSMGAG00000006716) ENSMGAG00000006637 ENSMGAG00000006682 GGA2 (ENSMGAG00000006590) African ostrich MODERN SPECIES 127 GGA2 (ENSSCUG00000001229) COG7 (ENSSCUG00000001230) SCNN1B (ENSSCUG00000001232) SCNN1G (ENSSCUG00000001236) USP31 (ENSSCUG00000001237) #18 HS3ST2 (ENSSCUG00000001239) #17 ENSSCUG00000001240 HS3ST4 (ENSSCUG00000001430) #16 KDM8 (ENSSCUG00000001432) #15 NSMCE1 (ENSSCUG00000001435) #14 ENSSCUG00000001437 IL21R (ENSSCUG00000001438) ENSSCUG00000001440 PDPK1 (ENSSCUG00000001443) #20 ENSSCUG00000001445 #21 UBE2I (ENSSCUG00000001447) #22 TSR3 (ENSSCUG00000001449) GNPTG (ENSSCUG00000001453) UNKL (ENSSCUG00000001458) #27 Australian saltwater crocodile MODERN SPECIES 46 EARS2 (ENSCPRG00005010896) GGA2 (ENSCPRG00005010824) COG7 (ENSCPRG00005010627) SCNN1B (ENSCPRG00005010547) SCNN1G (ENSCPRG00005010523) USP31 (ENSCPRG00005010498) #18 HS3ST2 (ENSCPRG00005010487) #17 ENSCPRG00005010482 HS3ST4 (ENSCPRG00005010474) #16 KDM8 (ENSCPRG00005010446) #15 NSMCE1 (ENSCPRG00005010435) #14 ENSCPRG00005010428 IL21R (ENSCPRG00005010418) PDPK1 (ENSCPRG00005010180) #20 KCTD5 (ENSCPRG00005010145) #21 UBE2I (ENSCPRG00005010136) #22 BMERB1 (ENSCPRG00005010133) MARF1 (ENSCPRG00005009654) NDE1 (ENSCPRG00005009586) MYH11 (ENSCPRG00005009485) CEP20 (ENSCPRG00005009469) ABCC1 (ENSCPRG00005009465) ABCC6 (ENSCPRG00005008857) ENSCPRG00005008484 XYLT1 (ENSCPRG00005008305) RPS15A (ENSCPRG00005008277) ARL6IP1 (ENSCPRG00005008273) SMG1 (ENSCPRG00005007543) CLEC19A (ENSCPRG00005007418) SYT17 (ENSCPRG00005007394) ENSCPRG00005007385 Cryptodira ANCESTRAL SPECIES 12 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 ENSGT00510000049652 ENSGT00940000158822 #27 Testudinoidea ANCESTRAL SPECIES 6 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893.a ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374.ib #21 ENSGT00940000160374.hb #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 ENSGT00510000049652 ENSGT00940000158822 #27 Testudinidae ANCESTRAL SPECIES 13 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893.a ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374.ib #21 ENSGT00940000160374.hb #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 ENSGT00510000049652 ENSGT00940000158822 #27 Goode s thornscrub tortoise MODERN SPECIES 1 GGA2 (ENSGEVG00005015005) COG7 (ENSGEVG00005015069) SCNN1B (ENSGEVG00005015140) SCNN1G (ENSGEVG00005015423) USP31 (ENSGEVG00005015498) #18 HS3ST2 (ENSGEVG00005015592) #17 ENSGEVG00005015613 HS3ST4 (ENSGEVG00005015638) #16 KDM8 (ENSGEVG00005015676) #15 NSMCE1 (ENSGEVG00005015712) #14 ENSGEVG00005015732 IL21R (ENSGEVG00005015759) ENSGEVG00005015819 PDPK1 (ENSGEVG00005015837) #20 KCTD5 (ENSGEVG00005015880) #21 UBE2I (ENSGEVG00005015893) #22 TSR3 (ENSGEVG00005015906) GNPTG (ENSGEVG00005015923) ENSGEVG00005015947 ENSGEVG00005016004 #27 Abingdon island giant tortoise MODERN SPECIES 1417 ENSCABG00000000939 PDPK1 (ENSCABG00000000974) #20 KCTD5 (ENSCABG00000001689) #21 UBE2I (ENSCABG00000001693) #22 TSR3 (ENSCABG00000001703) GNPTG (ENSCABG00000001708) ENSCABG00000001711 UNKL (ENSCABG00000001714) #27 Emydidae ANCESTRAL SPECIES 12 ENSGT00390000009759 ENSGT00940000159613 ENSGT00390000001260 ENSGT00940000160893.a ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374.hb #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT01030000235280 ENSGT00510000049652 ENSGT00940000158822 #27 painted turtle MODERN SPECIES 2421 UBFD1 (ENSCPBG00000002185) #7 EARS2 (ENSCPBG00000002203) GGA2 (ENSCPBG00000002252) COG7 (ENSCPBG00000002339) SCNN1B (ENSCPBG00000002357) SCNN1G (ENSCPBG00000002390) USP31 (ENSCPBG00000002421) #18 HS3ST2 (ENSCPBG00000002471) #17 KDM8 (ENSCPBG00000002494) #15 NSMCE1 (ENSCPBG00000002534) #14 ENSCPBG00000002579 IL21R (ENSCPBG00000002604) ENSCPBG00000002619 PDPK1 (ENSCPBG00000002628) #20 ENSCPBG00000002651 #21 UBE2I (ENSCPBG00000002660) #22 TSR3 (ENSCPBG00000002671) GNPTG (ENSCPBG00000002693) ENSCPBG00000002740 UNKL (ENSCPBG00000002794) #27 HS3ST4 (ENSCPBG00000002868) #16 Three-toed box turtle MODERN SPECIES 37 EARS2 (ENSTMTG00000019047) GGA2 (ENSTMTG00000019003) COG7 (ENSTMTG00000018973) SCNN1B (ENSTMTG00000018788) SCNN1G (ENSTMTG00000018726) USP31 (ENSTMTG00000018677) #18 HS3ST2 (ENSTMTG00000018665) #17 ENSTMTG00000018641 #16 KDM8 (ENSTMTG00000018618) #15 NSMCE1 (ENSTMTG00000018596) #14 ENSTMTG00000018582 IL21R (ENSTMTG00000018537) ENSTMTG00000018511 PDPK1 (ENSTMTG00000018485) #20 ENSTMTG00000018471 #21 UBE2I (ENSTMTG00000018457) #22 TSR3 (ENSTMTG00000018442) GNPTG (ENSTMTG00000018414) UQCC4 (ENSTMTG00000018402) UNKL (ENSTMTG00000018381) #27 Chinese turtle MODERN SPECIES 1108 KDM8 (ENSPSIG00000010778) #15 NSMCE1 (ENSPSIG00000010818) #14 ENSPSIG00000010826 ENSPSIG00000010837 ENSPSIG00000010846 PDPK1 (ENSPSIG00000010895) #20 ENSPSIG00000011103 #21 UBE2I (ENSPSIG00000011113) #22 ENSPSIG00000001357 TSR3 (ENSPSIG00000011146) GNPTG (ENSPSIG00000011170) ENSPSIG00000011268 #27 Lepidosauria ANCESTRAL SPECIES 54 ENSGT00390000012857 #7 ENSGT00390000009759 ENSGT00940000159613.b ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 tuatara MODERN SPECIES 222 ENSSPUG00000010203 ENSSPUG00000010157 ENSSPUG00000010145 ENSSPUG00000010134 ENSSPUG00000010129 SCNN1B (ENSSPUG00000010073) SCNN1G (ENSSPUG00000010013) HS3ST2 (ENSSPUG00000009970) #17 HS3ST4 (ENSSPUG00000009954) #16 KDM8 (ENSSPUG00000009940) #15 NSMCE1 (ENSSPUG00000009925) #14 ENSSPUG00000009904 ENSSPUG00000009887 PDPK1 (ENSSPUG00000009871) #20 KCTD5 (ENSSPUG00000009853) #21 UBE2I (ENSSPUG00000009827) #22 TSR3 (ENSSPUG00000009809) GNPTG (ENSSPUG00000009793) ENSSPUG00000009763 #27 Episquamata ANCESTRAL SPECIES 8 ENSGT00390000012857 #7 ENSGT00390000009759 ENSGT00940000159613.b ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 Laterata ANCESTRAL SPECIES 23 ENSGT00390000012857 #7 ENSGT00390000009759 ENSGT00940000159613.b ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 Common wall lizard MODERN SPECIES 5 EARS2 (ENSPMRG00000023401) GGA2 (ENSPMRG00000023399) COG7 (ENSPMRG00000023395) SCNN1B (ENSPMRG00000023394) ENSPMRG00000023391 ENSPMRG00000023378 USP31 (ENSPMRG00000023370) #18 HS3ST2 (ENSPMRG00000023367) #17 HS3ST4 (ENSPMRG00000023364) #16 KDM8 (ENSPMRG00000023359) #15 NSMCE1 (ENSPMRG00000023358) #14 ENSPMRG00000023357 IL21R (ENSPMRG00000023353) PDPK1 (ENSPMRG00000023345) #20 KCTD5 (ENSPMRG00000023342) #21 UBE2I (ENSPMRG00000023339) #22 TSR3 (ENSPMRG00000023335) GNPTG (ENSPMRG00000023331) IQGAP1 (ENSPMRG00000023123) TUBGCP4 (ENSPMRG00000023038) TP53BP1 (ENSPMRG00000023030) MAP1A (ENSPMRG00000023021) PPIP5K1 (ENSPMRG00000022980) ENSPMRG00000022960 STRC (ENSPMRG00000022942) ENSPMRG00000022929 PDIA3 (ENSPMRG00000022923) ENSPMRG00000022916 SERINC4 (ENSPMRG00000022913) ENSPMRG00000022911 MFAP1 (ENSPMRG00000022905) Argentine black and white tegu MODERN SPECIES 50 PLK1 (ENSSMRG00000016815) ERN2 (ENSSMRG00000016811) UBFD1 (ENSSMRG00000016810) #7 COG7 (ENSSMRG00000016808) SCNN1B (ENSSMRG00000016804) SCNN1G (ENSSMRG00000016803) USP31 (ENSSMRG00000016799) #18 HS3ST2 (ENSSMRG00000016795) #17 HS3ST4 (ENSSMRG00000016793) #16 IL21R (ENSSMRG00000016788) ENSSMRG00000016787 NSMCE1 (ENSSMRG00000016785) #14 KDM8 (ENSSMRG00000016784) #15 PDPK1 (ENSSMRG00000016783) #20 KCTD5 (ENSSMRG00000016781) #21 UBE2I (ENSSMRG00000016779) #22 TSR3 (ENSSMRG00000016777) GNPTG (ENSSMRG00000016775) MAPK8IP3 (ENSSMRG00000016766) ENSSMRG00000016765 JPT2 (ENSSMRG00000016763) CRAMP1 (ENSSMRG00000016756) TMEM204 (ENSSMRG00000016754) IFT140 (ENSSMRG00000016747) TELO2 (ENSSMRG00000016744) RNPS1 (ENSSMRG00000016741) ENSSMRG00000016735 ENSSMRG00000016733 AMDHD2 (ENSSMRG00000016727) ATP6V0C (ENSSMRG00000016724) TBC1D24 (ENSSMRG00000016720) Toxicofera ANCESTRAL SPECIES 66 ENSGT00940000160812 ENSGT00390000012857 #7 ENSGT00390000009759 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 Elapidae ANCESTRAL SPECIES 1 ENSGT00940000160812 ENSGT00390000012857 #7 ENSGT00390000009759 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a ENSGT00940000167821 ENSGT00390000014178 ENSGT00950000182935.B.b.d.e ENSGT00390000001979 ENSGT00940000158812 ENSGT00940000157651.i ENSGT00940000153095.h ENSGT00390000006348 ENSGT00390000017606.a.b ENSGT00940000164352 Elapidae_a ANCESTRAL SPECIES 21 ENSGT00940000160812 ENSGT00390000012857 #7 ENSGT00390000009759 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a ENSGT00940000167821 ENSGT00390000014178 ENSGT00950000182935.B.b.d.e ENSGT00390000001979 ENSGT00940000158812 ENSGT00940000157651.i ENSGT00940000153095.h ENSGT00390000006348 ENSGT00390000017606.a.b ENSGT00940000164352 Acanthophiinae ANCESTRAL SPECIES 28 ENSGT00940000160812 ENSGT00390000012857 #7 ENSGT00390000009759 ENSGT00390000001260 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 #18 ENSGT00940000160498 #17 ENSGT00940000161466 #16 ENSGT00940000158074 #15 ENSGT00390000009084 #14 ENSGT00510000049182 ENSGT00510000048783 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a ENSGT00940000167821 ENSGT00390000014178 ENSGT00950000182935.B.b.d.e ENSGT00390000001979 ENSGT00940000158812 ENSGT00940000157651.i ENSGT00940000153095.h ENSGT00390000006348 ENSGT00390000017606.a.b ENSGT00940000164352 Eastern brown snake MODERN SPECIES 24 ARHGAP17 (ENSPTXG00000002454) ENSPTXG00000002452 PLK1 (ENSPTXG00000002451) ERN2 (ENSPTXG00000002447) UBFD1 (ENSPTXG00000002442) #7 EARS2 (ENSPTXG00000002431) COG7 (ENSPTXG00000002428) SCNN1B (ENSPTXG00000002249) SCNN1G (ENSPTXG00000002247) ENSPTXG00000002246 HS3ST4 (ENSPTXG00000002165) #16 NSMCE1 (ENSPTXG00000002160) #14 IL21R (ENSPTXG00000002154) PDPK1 (ENSPTXG00000002147) #20 KCTD5 (ENSPTXG00000002143) #21 UBE2I (ENSPTXG00000002141) #22 TSR3 (ENSPTXG00000002135) GNPTG (ENSPTXG00000002127) TSC2 (ENSPTXG00000001803) NTHL1 (ENSPTXG00000001755) NHERF2 (ENSPTXG00000001753) ENSPTXG00000001752 ENSPTXG00000001750 ZNF598 (ENSPTXG00000001748) SYNGR3 (ENSPTXG00000001746) GFER (ENSPTXG00000001744) NOXO1 (ENSPTXG00000001743) TBL3 (ENSPTXG00000001739) ENSPTXG00000001732 NDUFB10 (ENSPTXG00000001731) ENSPTXG00000001728 Mainland tiger snake MODERN SPECIES 199 AQP8 (ENSNSUG00000014536) LCMT1 (ENSNSUG00000014537) ARHGAP17 (ENSNSUG00000014538) HS3ST4 (ENSNSUG00000014624) #16 KDM8 (ENSNSUG00000014626) #15 NSMCE1 (ENSNSUG00000014627) #14 ENSNSUG00000014634 IL21R (ENSNSUG00000014635) ENSNSUG00000014636 PDPK1 (ENSNSUG00000014637) #20 KCTD5 (ENSNSUG00000014644) #21 UBE2I (ENSNSUG00000014645) #22 TSR3 (ENSNSUG00000014647) GNPTG (ENSNSUG00000014648) TSC2 (ENSNSUG00000014649) NTHL1 (ENSNSUG00000015478) NHERF2 (ENSNSUG00000015479) ENSNSUG00000015484 ZNF598 (ENSNSUG00000015485) SYNGR3 (ENSNSUG00000015487) GFER (ENSNSUG00000015488) NOXO1 (ENSNSUG00000015489) TBL3 (ENSNSUG00000015492) RPS2 (ENSNSUG00000015563) NDUFB10 (ENSNSUG00000015565) RPL3L (ENSNSUG00000015567) ENSNSUG00000015569 Indian cobra MODERN SPECIES 15 PLK1 (ENSNNAG00000012431) ERN2 (ENSNNAG00000012364) UBFD1 (ENSNNAG00000012333) #7 EARS2 (ENSNNAG00000012183) COG7 (ENSNNAG00000012099) SCNN1B (ENSNNAG00000011842) SCNN1G (ENSNNAG00000011787) HS3ST2 (ENSNNAG00000011664) #17 HS3ST4 (ENSNNAG00000011637) #16 KDM8 (ENSNNAG00000011524) #15 NSMCE1 (ENSNNAG00000011481) #14 ENSNNAG00000011443 ENSNNAG00000011418 PDPK1 (ENSNNAG00000011321) #20 KCTD5 (ENSNNAG00000011297) #21 UBE2I (ENSNNAG00000011262) #22 TSR3 (ENSNNAG00000011229) ENSNNAG00000011170 TSC2 (ENSNNAG00000010941) NTHL1 (ENSNNAG00000010887) NHERF2 (ENSNNAG00000010855) ENSNNAG00000010844 ZNF598 (ENSNNAG00000010794) SYNGR3 (ENSNNAG00000010666) GFER (ENSNNAG00000010635) ENSNNAG00000010583 TBL3 (ENSNNAG00000010529) RPS2 (ENSNNAG00000010484) NDUFB10 (ENSNNAG00000010469) RPL3L (ENSNNAG00000010374) ENSNNAG00000010337 Lizard MODERN SPECIES 1219 HS3ST4 (ENSACAG00000036002) #16 KDM8 (ENSACAG00000003614) #15 NSMCE1 (ENSACAG00000003591) #14 ENSACAG00000003587 IL21R (ENSACAG00000003586) ENSACAG00000003492 #20 ENSACAG00000003448 #21 UBE2I (ENSACAG00000003445) #22 ENSACAG00000003434 GNPTG (ENSACAG00000003410) ENSACAG00000003362 ENSACAG00000003357 Mammalia ANCESTRAL SPECIES 43 ENSGT00390000010849.d ENSGT00940000157809 ENSGT00940000154590 ENSGT00940000163447 ENSGT00940000158623 ENSGT00940000170883 ENSGT00940000180160 ENSGT00390000015916 ENSGT00390000009825 ENSGT00940000156278 #37 ENSGT00390000002628 ENSGT00550000075071 #32 ENSGT00510000049125 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Platypus MODERN SPECIES 13 ENSOANG00000039214 ENSOANG00000039904 HBA (ENSOANG00000040250) ENSOANG00000032212 HBM (ENSOANG00000045830) ENSOANG00000045038 ENSOANG00000047511 NPRL3 (ENSOANG00000048347) MPG (ENSOANG00000045811) RHBDF1 (ENSOANG00000039609) #37 SNRNP25 (ENSOANG00000010976) POLR3K (ENSOANG00000039734) #32 ENSOANG00000040472 PDPK1 (ENSOANG00000002330) #20 KCTD5 (ENSOANG00000040492) #21 UBE2I (ENSOANG00000038123) #22 BAIAP3 (ENSOANG00000020781) #23 ENSOANG00000013594 ENSOANG00000048960 ENSOANG00000038628 CLCN7 (ENSOANG00000002751) TELO2 (ENSOANG00000001243) IFT140 (ENSOANG00000001815) TMEM204 (ENSOANG00000013655) CRAMP1 (ENSOANG00000002915) JPT2 (ENSOANG00000044642) MAPK8IP3 (ENSOANG00000011871) ENSOANG00000044345 MRPS34 (ENSOANG00000050507) SPSB3 (ENSOANG00000015654) NUBP2 (ENSOANG00000046631) Theria ANCESTRAL SPECIES 10 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00400000022459 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Eutheria ANCESTRAL SPECIES 23 ENSGT00940000161924 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000163349 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Boreoeutheria ANCESTRAL SPECIES 12 ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Euarchontoglires ANCESTRAL SPECIES 12 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207 ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 Primates ANCESTRAL SPECIES 11 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207 ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 Haplorrhini ANCESTRAL SPECIES 24 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207 ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 Tarsier MODERN SPECIES 6596 ENSTSYG00000034985 UBE2I (ENSTSYG00000028221) #22 BAIAP3 (ENSTSYG00000029544) #23 TSR3 (ENSTSYG00000026081) ENSTSYG00000026873 UNKL (ENSTSYG00000033619) #27 CUNH16orf91 (ENSTSYG00000030140) CCDC154 (ENSTSYG00000036155) CLCN7 (ENSTSYG00000033315) PTX4 (ENSTSYG00000033919) TELO2 (ENSTSYG00000014612) IFT140 (ENSTSYG00000006588) TMEM204 (ENSTSYG00000006646) CRAMP1 (ENSTSYG00000002901) JPT2 (ENSTSYG00000002923) MAPK8IP3 (ENSTSYG00000025647) MRPS34 (ENSTSYG00000031660) Simiiformes ANCESTRAL SPECIES 19 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207 ENSGT00940000164974 ENSGT00940000165532 ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 Catarrhini ANCESTRAL SPECIES 11 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00390000012409 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00940000165532 ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 Hominoidea ANCESTRAL SPECIES 9 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00390000012409 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00940000165532 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 Gibbon MODERN SPECIES 8 ENSNLEG00000008263 HAGHL (ENSNLEG00000008276) CIAO3 (ENSNLEG00000008292) MSLN (ENSNLEG00000008332) MSLNL (ENSNLEG00000008414) ENSNLEG00000008424 CHTF18 (ENSNLEG00000008429) GNG13 (ENSNLEG00000030117) ENSNLEG00000027759 LMF1 (ENSNLEG00000008453) SOX8 (ENSNLEG00000008488) ENSNLEG00000031104 ENSNLEG00000008522 ENSNLEG00000030455 ENSNLEG00000008523 UBE2I (ENSNLEG00000008525) #22 BAIAP3 (ENSNLEG00000008558) #23 ENSNLEG00000029520 ENSNLEG00000008616 UNKL (ENSNLEG00000008624) #27 UQCC4 (ENSNLEG00000034051) ENSNLEG00000030883 CCDC154 (ENSNLEG00000008642) ENSNLEG00000008654 ENSNLEG00000028593 TELO2 (ENSNLEG00000008667) TMEM204 (ENSNLEG00000008742) IFT140 (ENSNLEG00000008705) CRAMP1 (ENSNLEG00000008491) ENSNLEG00000029033 MAPK8IP3 (ENSNLEG00000026706) Hominidae ANCESTRAL SPECIES 9 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00390000012409 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00940000165532 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 Homo/Pan/Gorilla group ANCESTRAL SPECIES 24 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00390000012409 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00940000165532 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 Gorilla MODERN SPECIES 7 HAGHL (ENSGGOG00000013934) CIAO3 (ENSGGOG00000013946) MSLN (ENSGGOG00000013962) MSLNL (ENSGGOG00000013980) RPUSD1 (ENSGGOG00000013997) ENSGGOG00000014003 GNG13 (ENSGGOG00000040118) ENSGGOG00000014032 LMF1 (ENSGGOG00000002451) SOX8 (ENSGGOG00000006906) ENSGGOG00000041631 C1QTNF8 (ENSGGOG00000027309) CACNA1H (ENSGGOG00000014033) TPSG1 (ENSGGOG00000014055) TPSD1 (ENSGGOG00000014066) UBE2I (ENSGGOG00000042163) #22 BAIAP3 (ENSGGOG00000011646) #23 TSR3 (ENSGGOG00000011679) GNPTG (ENSGGOG00000016320) ENSGGOG00000040860 UNKL (ENSGGOG00000014915) #27 UQCC4 (ENSGGOG00000036674) PERCC1 (ENSGGOG00000014929) CCDC154 (ENSGGOG00000014932) ENSGGOG00000014942 PTX4 (ENSGGOG00000005872) TELO2 (ENSGGOG00000005878) IFT140 (ENSGGOG00000005889) TMEM204 (ENSGGOG00000005903) CRAMP1 (ENSGGOG00000006181) JPT2 (ENSGGOG00000006200) Homo/Pan group ANCESTRAL SPECIES 23 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00390000012409 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00940000165532 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 Pan ANCESTRAL SPECIES 28 ENSGT00940000161924 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00390000012409 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 Bonobo MODERN SPECIES 7 CIAO3 (ENSPPAG00000043883) MSLN (ENSPPAG00000028895) MSLNL (ENSPPAG00000028814) RPUSD1 (ENSPPAG00000034797) CHTF18 (ENSPPAG00000028087) GNG13 (ENSPPAG00000033639) ENSPPAG00000033728 LMF1 (ENSPPAG00000034629) ENSPPAG00000029154 ENSPPAG00000029540 C1QTNF8 (ENSPPAG00000030379) CACNA1H (ENSPPAG00000034389) TPSG1 (ENSPPAG00000037940) TPSD1 (ENSPPAG00000040532) ENSPPAG00000042671 UBE2I (ENSPPAG00000011896) #22 BAIAP3 (ENSPPAG00000029908) #23 ENSPPAG00000032379 GNPTG (ENSPPAG00000040528) ENSPPAG00000032844 UNKL (ENSPPAG00000043365) #27 UQCC4 (ENSPPAG00000035290) PERCC1 (ENSPPAG00000011265) CCDC154 (ENSPPAG00000039800) CLCN7 (ENSPPAG00000035677) PTX4 (ENSPPAG00000012282) TELO2 (ENSPPAG00000031847) IFT140 (ENSPPAG00000041233) TMEM204 (ENSPPAG00000033773) CRAMP1 (ENSPPAG00000036103) JPT2 (ENSPPAG00000034952) Chimpanzee MODERN SPECIES 7 HAGHL (ENSPTRG00000007560) CIAO3 (ENSPTRG00000007561) MSLN (ENSPTRG00000007563) ENSPTRG00000007564 RPUSD1 (ENSPTRG00000007565) CHTF18 (ENSPTRG00000043562) GNG13 (ENSPTRG00000043935) PRR25 (ENSPTRG00000007568) LMF1 (ENSPTRG00000007569) SOX8 (ENSPTRG00000007570) SSTR5 (ENSPTRG00000044619) C1QTNF8 (ENSPTRG00000007577) CACNA1H (ENSPTRG00000007580) TPSG1 (ENSPTRG00000052026) TPSB2 (ENSPTRG00000007584) UBE2I (ENSPTRG00000007587) #22 BAIAP3 (ENSPTRG00000007588) #23 TSR3 (ENSPTRG00000007589) GNPTG (ENSPTRG00000007590) ENSPTRG00000049802 UNKL (ENSPTRG00000007591) #27 UQCC4 (ENSPTRG00000007592) PERCC1 (ENSPTRG00000052156) CCDC154 (ENSPTRG00000023886) CLCN7 (ENSPTRG00000007594) PTX4 (ENSPTRG00000007595) TELO2 (ENSPTRG00000007596) IFT140 (ENSPTRG00000007600) TMEM204 (ENSPTRG00000031314) CRAMP1 (ENSPTRG00000007602) JPT2 (ENSPTRG00000034459) Human MODERN SPECIES 7 CIAO3 (ENSG00000103245) MSLN (ENSG00000102854) MSLNL (ENSG00000162006) RPUSD1 (ENSG00000007376) CHTF18 (ENSG00000127586) GNG13 (ENSG00000127588) LMF1 (ENSG00000103227) SOX8 (ENSG00000005513) SSTR5 (ENSG00000162009) C1QTNF8 (ENSG00000184471) CACNA1H (ENSG00000196557) TPSG1 (ENSG00000116176) TPSB2 (ENSG00000197253) TPSAB1 (ENSG00000172236) TPSD1 (ENSG00000095917) UBE2I (ENSG00000103275) #22 BAIAP3 (ENSG00000007516) #23 TSR3 (ENSG00000007520) GNPTG (ENSG00000090581) UNKL (ENSG00000059145) #27 UQCC4 (ENSG00000174109) PERCC1 (ENSG00000284395) CCDC154 (ENSG00000197599) CLCN7 (ENSG00000103249) PTX4 (ENSG00000251692) TELO2 (ENSG00000100726) IFT140 (ENSG00000187535) TMEM204 (ENSG00000131634) CRAMP1 (ENSG00000007545) JPT2 (ENSG00000206053) MAPK8IP3 (ENSG00000138834) Orangutan MODERN SPECIES 7 METRN (ENSPPYG00000006926) ENSPPYG00000006927 CCDC78 (ENSPPYG00000006928) HAGHL (ENSPPYG00000006929) CIAO3 (ENSPPYG00000006930) ENSPPYG00000041052 ENSPPYG00000006934 GNG13 (ENSPPYG00000034165) SOX8 (ENSPPYG00000006937) SSTR5 (ENSPPYG00000006939) C1QTNF8 (ENSPPYG00000006940) CACNA1H (ENSPPYG00000006941) TPSG1 (ENSPPYG00000006942) ENSPPYG00000007748 TPSD1 (ENSPPYG00000006943) ENSPPYG00000035138 #22 TSR3 (ENSPPYG00000034811) GNPTG (ENSPPYG00000006949) UNKL (ENSPPYG00000006950) #27 UQCC4 (ENSPPYG00000006951) PERCC1 (ENSPPYG00000006952) CCDC154 (ENSPPYG00000006953) CLCN7 (ENSPPYG00000006954) PTX4 (ENSPPYG00000035702) TELO2 (ENSPPYG00000006955) IFT140 (ENSPPYG00000006956) TMEM204 (ENSPPYG00000006957) CRAMP1 (ENSPPYG00000006958) JPT2 (ENSPPYG00000006959) MAPK8IP3 (ENSPPYG00000006960) NME3 (ENSPPYG00000032952) Cercopithecidae ANCESTRAL SPECIES 8 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00390000012409 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00940000165532 ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Rhinopithecus ANCESTRAL SPECIES 14 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00390000012409 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00940000165532 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Black snub-nosed monkey MODERN SPECIES 1929 HAGHL (ENSRBIG00000017474) CIAO3 (ENSRBIG00000044810) MSLN (ENSRBIG00000033006) MSLNL (ENSRBIG00000033260) RPUSD1 (ENSRBIG00000030238) CHTF18 (ENSRBIG00000018095) GNG13 (ENSRBIG00000029023) ENSRBIG00000024093 LMF1 (ENSRBIG00000037476) SOX8 (ENSRBIG00000040054) SSTR5 (ENSRBIG00000035056) C1QTNF8 (ENSRBIG00000036447) CACNA1H (ENSRBIG00000028318) TPSG1 (ENSRBIG00000041776) ENSRBIG00000044236 UBE2I (ENSRBIG00000013186) #22 BAIAP3 (ENSRBIG00000031600) #23 TSR3 (ENSRBIG00000043958) GNPTG (ENSRBIG00000034109) UNKL (ENSRBIG00000040235) #27 UQCC4 (ENSRBIG00000038097) CCDC154 (ENSRBIG00000040319) CLCN7 (ENSRBIG00000039539) PTX4 (ENSRBIG00000027792) TELO2 (ENSRBIG00000038822) IFT140 (ENSRBIG00000040322) TMEM204 (ENSRBIG00000033674) CRAMP1 (ENSRBIG00000031863) JPT2 (ENSRBIG00000041459) MAPK8IP3 (ENSRBIG00000044410) NME3 (ENSRBIG00000031631) Golden snub-nosed monkey MODERN SPECIES 2643 RPUSD1 (ENSRROG00000036663) CHTF18 (ENSRROG00000039624) GNG13 (ENSRROG00000030025) ENSRROG00000032446 LMF1 (ENSRROG00000045218) SOX8 (ENSRROG00000038995) SSTR5 (ENSRROG00000034422) C1QTNF8 (ENSRROG00000035549) CACNA1H (ENSRROG00000008261) TPSG1 (ENSRROG00000026922) ENSRROG00000035736 TPSD1 (ENSRROG00000043542) UBE2I (ENSRROG00000044039) #22 BAIAP3 (ENSRROG00000031004) #23 TSR3 (ENSRROG00000042532) GNPTG (ENSRROG00000035086) UNKL (ENSRROG00000029341) #27 UQCC4 (ENSRROG00000041801) CCDC154 (ENSRROG00000044225) CLCN7 (ENSRROG00000041929) PTX4 (ENSRROG00000043040) TELO2 (ENSRROG00000028637) IFT140 (ENSRROG00000015287) TMEM204 (ENSRROG00000043665) CRAMP1 (ENSRROG00000043453) JPT2 (ENSRROG00000025417) MAPK8IP3 (ENSRROG00000045499) ENSRROG00000035949 Cercopithecinae ANCESTRAL SPECIES 10 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00390000012409 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00940000165532 ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Vervet Monkey MODERN SPECIES 24 HAGHL (ENSCSAG00000012211) CIAO3 (ENSCSAG00000012192) MSLN (ENSCSAG00000012142) RPUSD1 (ENSCSAG00000012121) CHTF18 (ENSCSAG00000012074) GNG13 (ENSCSAG00000012002) LMF1 (ENSCSAG00000011966) SOX8 (ENSCSAG00000011890) SSTR5 (ENSCSAG00000018841) C1QTNF8 (ENSCSAG00000011883) CACNA1H (ENSCSAG00000011870) TPSG1 (ENSCSAG00000011847) ENSCSAG00000011838 TPSD1 (ENSCSAG00000011820) ENSCSAG00000011780 UBE2I (ENSCSAG00000011775) #22 BAIAP3 (ENSCSAG00000011761) #23 TSR3 (ENSCSAG00000011742) GNPTG (ENSCSAG00000011737) UNKL (ENSCSAG00000011709) #27 UQCC4 (ENSCSAG00000011651) CCDC154 (ENSCSAG00000011633) CLCN7 (ENSCSAG00000011607) PTX4 (ENSCSAG00000011586) TELO2 (ENSCSAG00000011579) IFT140 (ENSCSAG00000011558) TMEM204 (ENSCSAG00000011531) CRAMP1 (ENSCSAG00000011519) JPT2 (ENSCSAG00000011502) MAPK8IP3 (ENSCSAG00000011484) NME3 (ENSCSAG00000011458) Cercopithecinae_a ANCESTRAL SPECIES 10 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00390000012409 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00940000165532 ENSGT00940000163159.b.a ENSGT00940000158868.f ENSGT00940000158868.e.a ENSGT00940000158868.e.b ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Cercopithecinae_b ANCESTRAL SPECIES 5 ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00390000012409 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00940000165532 ENSGT00940000163159.b.a ENSGT00940000158868.e.a ENSGT00940000158868.e.b ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Olive baboon MODERN SPECIES 9 ENSPANG00000043739 ENSPANG00000017869 ENSPANG00000017868 UBE2I (ENSPANG00000030254) #22 TSR3 (ENSPANG00000006419) GNPTG (ENSPANG00000016391) UNKL (ENSPANG00000015754) #27 UQCC4 (ENSPANG00000021088) CCDC154 (ENSPANG00000019550) CLCN7 (ENSPANG00000019552) PTX4 (ENSPANG00000021087) TELO2 (ENSPANG00000026315) TMEM204 (ENSPANG00000018087) IFT140 (ENSPANG00000018206) CRAMP1 (ENSPANG00000017496) JPT2 (ENSPANG00000016521) MAPK8IP3 (ENSPANG00000018354) NME3 (ENSPANG00000017598) MRPS34 (ENSPANG00000020905) Cercopithecinae_d ANCESTRAL SPECIES 65 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00390000012409 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00940000165532 ENSGT00940000163159.b.a ENSGT00940000158868.e.a ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Drill MODERN SPECIES 1516 CIAO3 (ENSMLEG00000044407) MSLN (ENSMLEG00000012761) MSLNL (ENSMLEG00000036648) RPUSD1 (ENSMLEG00000030591) CHTF18 (ENSMLEG00000037967) GNG13 (ENSMLEG00000042875) ENSMLEG00000042968 LMF1 (ENSMLEG00000024397) SOX8 (ENSMLEG00000038862) SSTR5 (ENSMLEG00000042124) C1QTNF8 (ENSMLEG00000036555) CACNA1H (ENSMLEG00000024043) TPSG1 (ENSMLEG00000041326) ENSMLEG00000037488 TPSD1 (ENSMLEG00000040956) UBE2I (ENSMLEG00000037403) #22 BAIAP3 (ENSMLEG00000043092) #23 TSR3 (ENSMLEG00000030991) GNPTG (ENSMLEG00000035838) UNKL (ENSMLEG00000037946) #27 UQCC4 (ENSMLEG00000035865) CCDC154 (ENSMLEG00000005828) CLCN7 (ENSMLEG00000027830) PTX4 (ENSMLEG00000042635) TELO2 (ENSMLEG00000035497) IFT140 (ENSMLEG00000035964) TMEM204 (ENSMLEG00000040932) CRAMP1 (ENSMLEG00000040080) JPT2 (ENSMLEG00000030463) MAPK8IP3 (ENSMLEG00000034940) ENSMLEG00000038547 Sooty mangabey MODERN SPECIES 104 CIAO3 (ENSCATG00000043624) MSLN (ENSCATG00000041126) MSLNL (ENSCATG00000040787) RPUSD1 (ENSCATG00000042983) CHTF18 (ENSCATG00000045267) LMF1 (ENSCATG00000043100) SOX8 (ENSCATG00000038928) SSTR5 (ENSCATG00000033092) C1QTNF8 (ENSCATG00000045347) CACNA1H (ENSCATG00000037439) TPSG1 (ENSCATG00000037946) ENSCATG00000036021 TPSD1 (ENSCATG00000038349) ENSCATG00000037735 ENSCATG00000035675 UBE2I (ENSCATG00000038133) #22 BAIAP3 (ENSCATG00000044317) #23 TSR3 (ENSCATG00000002510) GNPTG (ENSCATG00000040204) UNKL (ENSCATG00000033183) #27 UQCC4 (ENSCATG00000017665) PERCC1 (ENSCATG00000014112) CCDC154 (ENSCATG00000039677) CLCN7 (ENSCATG00000013101) PTX4 (ENSCATG00000041551) TELO2 (ENSCATG00000031718) TMEM204 (ENSCATG00000041448) IFT140 (ENSCATG00000035856) CRAMP1 (ENSCATG00000039680) JPT2 (ENSCATG00000039325) MAPK8IP3 (ENSCATG00000037988) Macaca ANCESTRAL SPECIES 8 ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00940000165532 ENSGT00940000163159.b.a ENSGT00940000158868.f ENSGT00940000158868.e.a ENSGT00940000158868.e.b ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Pig-tailed macaque MODERN SPECIES 124 MSLN (ENSMNEG00000034612) MSLNL (ENSMNEG00000045174) RPUSD1 (ENSMNEG00000042712) GNG13 (ENSMNEG00000042210) CHTF18 (ENSMNEG00000033945) ENSMNEG00000027492 LMF1 (ENSMNEG00000036134) SOX8 (ENSMNEG00000040290) SSTR5 (ENSMNEG00000024521) C1QTNF8 (ENSMNEG00000045208) CACNA1H (ENSMNEG00000036229) TPSG1 (ENSMNEG00000043978) ENSMNEG00000039038 TPSD1 (ENSMNEG00000029318) ENSMNEG00000044556 UBE2I (ENSMNEG00000041643) #22 BAIAP3 (ENSMNEG00000028463) #23 TSR3 (ENSMNEG00000038392) GNPTG (ENSMNEG00000038413) UNKL (ENSMNEG00000036131) #27 UQCC4 (ENSMNEG00000032053) PERCC1 (ENSMNEG00000002629) CCDC154 (ENSMNEG00000041464) CLCN7 (ENSMNEG00000032889) PTX4 (ENSMNEG00000003932) TELO2 (ENSMNEG00000030153) TMEM204 (ENSMNEG00000029407) IFT140 (ENSMNEG00000001208) CRAMP1 (ENSMNEG00000032283) JPT2 (ENSMNEG00000034006) MAPK8IP3 (ENSMNEG00000034470) Macaca_a ANCESTRAL SPECIES 25 ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00940000165532 ENSGT00940000163159.b.a ENSGT00940000158868.f ENSGT00940000158868.e.a ENSGT00940000158868.e.b ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b.b.a.a.a.a.b.b.b.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Rhesus MODERN SPECIES 12 GNG13 (ENSMMUG00000000846) LMF1 (ENSMMUG00000011133) SOX8 (ENSMMUG00000051720) ENSMMUG00000061954 SSTR5 (ENSMMUG00000002896) C1QTNF8 (ENSMMUG00000058265) CACNA1H (ENSMMUG00000014213) TPSG1 (ENSMMUG00000000392) ENSMMUG00000015103 TPSD1 (ENSMMUG00000003108) ENSMMUG00000053253 ENSMMUG00000063334 ENSMMUG00000043574 ENSMMUG00000047001 ENSMMUG00000050892 UBE2I (ENSMMUG00000044277) #22 TSR3 (ENSMMUG00000006428) GNPTG (ENSMMUG00000012439) UNKL (ENSMMUG00000012440) #27 ENSMMUG00000061546 CLCN7 (ENSMMUG00000021518) CCDC154 (ENSMMUG00000021102) PTX4 (ENSMMUG00000062229) ENSMMUG00000050070 TELO2 (ENSMMUG00000008119) IFT140 (ENSMMUG00000000044) TMEM204 (ENSMMUG00000062198) CRAMP1 (ENSMMUG00000000978) ENSMMUG00000059063 JPT2 (ENSMMUG00000000979) MAPK8IP3 (ENSMMUG00000017496) Crab-eating macaque MODERN SPECIES 12 ENSMFAG00000003961 CHTF18 (ENSMFAG00000033447) LMF1 (ENSMFAG00000031494) SOX8 (ENSMFAG00000063189) ENSMFAG00000062352 SSTR5 (ENSMFAG00000042162) C1QTNF8 (ENSMFAG00000042628) ENSMFAG00000049126 TPSG1 (ENSMFAG00000035519) ENSMFAG00000043035 ENSMFAG00000043887 ENSMFAG00000056548 ENSMFAG00000043936 ENSMFAG00000065039 ENSMFAG00000054924 UBE2I (ENSMFAG00000044410) #22 BAIAP3 (ENSMFAG00000001912) #23 TSR3 (ENSMFAG00000031171) GNPTG (ENSMFAG00000031980) ENSMFAG00000064676 #27 ENSMFAG00000059912 CLCN7 (ENSMFAG00000031886) CCDC154 (ENSMFAG00000000761) PTX4 (ENSMFAG00000031460) ENSMFAG00000058884 TELO2 (ENSMFAG00000037116) IFT140 (ENSMFAG00000038575) TMEM204 (ENSMFAG00000032333) CRAMP1 (ENSMFAG00000002985) JPT2 (ENSMFAG00000033861) ENSMFAG00000060156 Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00550000075088.a.a.i #22 Cebidae ANCESTRAL SPECIES ENSGT00550000075088.a.a.i #22 Cebidae_a ANCESTRAL SPECIES ENSGT00550000075088.a.a.i #22 Bolivian squirrel monkey MODERN SPECIES 45 CPT2 (ENSSBOG00000032010) SLC1A7 (ENSSBOG00000035725) PODN (ENSSBOG00000027780) SCP2 (ENSSBOG00000029047) ECHDC2 (ENSSBOG00000033599) ZYG11A (ENSSBOG00000026783) ZYG11B (ENSSBOG00000028596) ENSSBOG00000033961 COA7 (ENSSBOG00000026955) SHISAL2A (ENSSBOG00000032493) TUT4 (ENSSBOG00000013661) PRPF38A (ENSSBOG00000019515) ORC1 (ENSSBOG00000026616) CC2D1B (ENSSBOG00000019712) ZFYVE9 (ENSSBOG00000035519) ENSSBOG00000021281 #22 ENSSBOG00000021947 TXNDC12 (ENSSBOG00000022535) RAB3B (ENSSBOG00000011518) ENSSBOG00000000079 OSBPL9 (ENSSBOG00000022113) EPS15 (ENSSBOG00000021478) TTC39A (ENSSBOG00000034095) RNF11 (ENSSBOG00000029247) C1orf185 (ENSSBOG00000034584) CDKN2C (ENSSBOG00000035100) FAF1 (ENSSBOG00000035904) ENSSBOG00000021083 ENSSBOG00000024407 ENSSBOG00000031899 ENSSBOG00000035179 Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00550000075088.a.a.j.a #22 Mas night monkey MODERN SPECIES 287 NXF3 (ENSANAG00000027929) ENSANAG00000031389 ENSANAG00000023872 TCEAL7 (ENSANAG00000031024) BEX3 (ENSANAG00000020665) ENSANAG00000020471 RAB40A (ENSANAG00000019831) ENSANAG00000029717 #22 TCEAL1 (ENSANAG00000030936) ENSANAG00000031384 TMEM31 (ENSANAG00000026176) ENSANAG00000024801 PLP1 (ENSANAG00000023695) RAB9B (ENSANAG00000031345) Platyrrhini DUPLICATION Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES 32 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000164974 ENSGT00940000162207 ENSGT00940000158868 ENSGT00550000075088.a.a.j.b.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Cebidae ANCESTRAL SPECIES 16 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207.c ENSGT00940000164974 ENSGT00940000162207.d ENSGT00940000158868 ENSGT00550000075088.a.a.j.b.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Cebidae_a ANCESTRAL SPECIES 15 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000163090 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207.c ENSGT00940000164974 ENSGT00940000162207.d ENSGT00940000158868 ENSGT00550000075088.a.a.j.b.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Bolivian squirrel monkey MODERN SPECIES 71 CCDC78 (ENSSBOG00000020621) CIAO3 (ENSSBOG00000031317) HAGHL (ENSSBOG00000029593) MSLN (ENSSBOG00000024123) MSLNL (ENSSBOG00000022928) RPUSD1 (ENSSBOG00000033063) CHTF18 (ENSSBOG00000011521) GNG13 (ENSSBOG00000030692) LMF1 (ENSSBOG00000031806) SOX8 (ENSSBOG00000032429) C1QTNF8 (ENSSBOG00000031870) CACNA1H (ENSSBOG00000019467) TPSG1 (ENSSBOG00000020761) ENSSBOG00000025605 ENSSBOG00000009155 ENSSBOG00000028070 #22 BAIAP3 (ENSSBOG00000018805) #23 TSR3 (ENSSBOG00000020595) GNPTG (ENSSBOG00000023025) UNKL (ENSSBOG00000031173) #27 UQCC4 (ENSSBOG00000018977) CCDC154 (ENSSBOG00000033270) CLCN7 (ENSSBOG00000021371) PTX4 (ENSSBOG00000024401) TELO2 (ENSSBOG00000031314) IFT140 (ENSSBOG00000021449) TMEM204 (ENSSBOG00000023717) CRAMP1 (ENSSBOG00000032950) JPT2 (ENSSBOG00000021481) MAPK8IP3 (ENSSBOG00000032195) NME3 (ENSSBOG00000035930) Capuchin MODERN SPECIES 214 ENSCCAG00000001879 ZYG11B (ENSCCAG00000009244) ENSCCAG00000027763 SHISAL2A (ENSCCAG00000034291) GPX7 (ENSCCAG00000028048) TUT4 (ENSCCAG00000036903) PRPF38A (ENSCCAG00000026502) ORC1 (ENSCCAG00000032687) CC2D1B (ENSCCAG00000026730) ENSCCAG00000034822 ZFYVE9 (ENSCCAG00000010035) ENSCCAG00000023775 #22 BTF3L4 (ENSCCAG00000034219) TXNDC12 (ENSCCAG00000021353) RAB3B (ENSCCAG00000035544) NRDC (ENSCCAG00000035997) ENSCCAG00000022769 EPS15 (ENSCCAG00000020337) TTC39A (ENSCCAG00000029112) RNF11 (ENSCCAG00000021392) C1orf185 (ENSCCAG00000035941) ENSCCAG00000024446 ENSCCAG00000020651 CDKN2C (ENSCCAG00000020423) ENSCCAG00000027169 FAF1 (ENSCCAG00000024129) DMRTA2 (ENSCCAG00000026118) Marmoset MODERN SPECIES 3 ANTKMT (ENSCJAG00000012154) CCDC78 (ENSCJAG00000012165) HAGHL (ENSCJAG00000012174) CIAO3 (ENSCJAG00000012185) MSLN (ENSCJAG00000012194) RPUSD1 (ENSCJAG00000012253) CHTF18 (ENSCJAG00000012262) GNG13 (ENSCJAG00000075194) LMF1 (ENSCJAG00000012302) SOX8 (ENSCJAG00000073860) SSTR5 (ENSCJAG00000002659) C1QTNF8 (ENSCJAG00000002657) CACNA1H (ENSCJAG00000013323) TPSG1 (ENSCJAG00000013318) ENSCJAG00000013282 UBE2I (ENSCJAG00000043035) #22 BAIAP3 (ENSCJAG00000013194) #23 TSR3 (ENSCJAG00000013185) GNPTG (ENSCJAG00000013166) UNKL (ENSCJAG00000013151) #27 UQCC4 (ENSCJAG00000014406) PERCC1 (ENSCJAG00000038190) CCDC154 (ENSCJAG00000014379) CLCN7 (ENSCJAG00000014423) PTX4 (ENSCJAG00000014497) TELO2 (ENSCJAG00000014499) IFT140 (ENSCJAG00000014532) TMEM204 (ENSCJAG00000014588) CRAMP1 (ENSCJAG00000014596) ENSCJAG00000014626 MAPK8IP3 (ENSCJAG00000053951) Mas night monkey MODERN SPECIES 1162 RNF144A (ENSANAG00000033462) RSAD2 (ENSANAG00000032315) CMPK2 (ENSANAG00000030809) SOX11 (ENSANAG00000019575) DCDC2C (ENSANAG00000030597) ALLC (ENSANAG00000031020) COLEC11 (ENSANAG00000027990) ENSANAG00000025380 RNASEH1 (ENSANAG00000024055) ADI1 (ENSANAG00000023261) ENSANAG00000019349 #22 BAIAP3 (ENSANAG00000026454) #23 TSR3 (ENSANAG00000023143) GNPTG (ENSANAG00000021857) UNKL (ENSANAG00000021942) #27 UQCC4 (ENSANAG00000021620) CCDC154 (ENSANAG00000020546) CLCN7 (ENSANAG00000037591) PTX4 (ENSANAG00000035628) TELO2 (ENSANAG00000035480) TMEM204 (ENSANAG00000034748) IFT140 (ENSANAG00000033226) CRAMP1 (ENSANAG00000027271) JPT2 (ENSANAG00000026079) NME3 (ENSANAG00000023706) MRPS34 (ENSANAG00000021904) Platyrrhini ANCESTRAL SPECIES ENSGT00550000075088.a.a.j.b.a.b #22 Cebidae ANCESTRAL SPECIES ENSGT00550000075088.a.a.j.b.a.b #22 Cebidae_a ANCESTRAL SPECIES ENSGT00550000075088.a.a.j.b.a.b #22 Capuchin MODERN SPECIES 7 BTG3 (ENSCCAG00000021164) CXADR (ENSCCAG00000020734) ENSCCAG00000033468 USP25 (ENSCCAG00000035996) NRIP1 (ENSCCAG00000017742) ENSCCAG00000001307 SAMSN1 (ENSCCAG00000022867) HSPA13 (ENSCCAG00000030885) ENSCCAG00000025611 ENSCCAG00000036901 RBM11 (ENSCCAG00000030608) LIPI (ENSCCAG00000029135) ROBO2 (ENSCCAG00000036962) ROBO1 (ENSCCAG00000009443) ENSCCAG00000033123 ENSCCAG00000032374 #22 GBE1 (ENSCCAG00000027926) ARHGAP20 (ENSCCAG00000022772) Bolivian squirrel monkey MODERN SPECIES 65 PCDH7 (ENSSBOG00000011267) STIM2 (ENSSBOG00000030023) TBC1D19 (ENSSBOG00000030316) CCKAR (ENSSBOG00000028673) RBPJ (ENSSBOG00000024531) ENSSBOG00000022950 SEL1L3 (ENSSBOG00000031484) SLC34A2 (ENSSBOG00000023680) ANAPC4 (ENSSBOG00000025712) ZCCHC4 (ENSSBOG00000020855) PI4K2B (ENSSBOG00000030108) SEPSECS (ENSSBOG00000023218) LGI2 (ENSSBOG00000033943) CCDC149 (ENSSBOG00000034478) SOD3 (ENSSBOG00000003134) ENSSBOG00000030054 #22 DHX15 (ENSSBOG00000022126) PPARGC1A (ENSSBOG00000006423) GBA3 (ENSSBOG00000032739) ADGRA3 (ENSSBOG00000006417) ENSSBOG00000032262 ENSSBOG00000023241 KCNIP4 (ENSSBOG00000034826) PACRGL (ENSSBOG00000024032) SLIT2 (ENSSBOG00000017816) ENSSBOG00000030307 LCORL (ENSSBOG00000026920) NCAPG (ENSSBOG00000022967) ENSSBOG00000009348 DCAF16 (ENSSBOG00000013262) FAM184B (ENSSBOG00000030079) Mas night monkey MODERN SPECIES 929 ZNF280C (ENSANAG00000026195) SLC25A14 (ENSANAG00000031757) RBMX2 (ENSANAG00000032814) ENSANAG00000036631 ENOX2 (ENSANAG00000021120) ENSANAG00000033307 ARHGAP36 (ENSANAG00000022925) IGSF1 (ENSANAG00000024439) ENSANAG00000037790 ENSANAG00000030022 STK26 (ENSANAG00000037908) FRMD7 (ENSANAG00000001063) RAP2C (ENSANAG00000033585) MBNL3 (ENSANAG00000026531) HS6ST2 (ENSANAG00000032618) ENSANAG00000028115 #22 USP26 (ENSANAG00000023425) ENSANAG00000026790 GYG2 (ENSANAG00000027736) ARSD (ENSANAG00000028530) ARSL (ENSANAG00000028554) ARSH (ENSANAG00000029409) ARSF (ENSANAG00000033998) MXRA5 (ENSANAG00000001595) PRKX (ENSANAG00000022074) ENSANAG00000019222 ENSANAG00000032067 Platyrrhini ANCESTRAL SPECIES ENSGT00550000075088.a.a.j.b.b #22 Cebidae ANCESTRAL SPECIES ENSGT00550000075088.a.a.j.b.b #22 Cebidae_a ANCESTRAL SPECIES ENSGT00550000075088.a.a.j.b.b #22 Capuchin MODERN SPECIES 444 HAGHL (ENSCCAG00000018173) CIAO3 (ENSCCAG00000028216) MSLN (ENSCCAG00000034954) MSLNL (ENSCCAG00000027086) RPUSD1 (ENSCCAG00000034385) CHTF18 (ENSCCAG00000021607) GNG13 (ENSCCAG00000031841) LMF1 (ENSCCAG00000036462) SOX8 (ENSCCAG00000024300) C1QTNF8 (ENSCCAG00000031548) CACNA1H (ENSCCAG00000023719) TPSG1 (ENSCCAG00000026315) ENSCCAG00000029560 ENSCCAG00000026358 ENSCCAG00000036726 ENSCCAG00000009138 #22 BAIAP3 (ENSCCAG00000014999) #23 TSR3 (ENSCCAG00000034922) GNPTG (ENSCCAG00000033363) UNKL (ENSCCAG00000022808) #27 C16orf91 (ENSCCAG00000036104) CCDC154 (ENSCCAG00000036580) CLCN7 (ENSCCAG00000020383) PTX4 (ENSCCAG00000014809) TELO2 (ENSCCAG00000023349) IFT140 (ENSCCAG00000019829) TMEM204 (ENSCCAG00000022468) CRAMP1 (ENSCCAG00000022072) JPT2 (ENSCCAG00000025880) MAPK8IP3 (ENSCCAG00000026687) NME3 (ENSCCAG00000035080) Strepsirrhini ANCESTRAL SPECIES 24 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207 ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Bushbaby MODERN SPECIES 159 MSLNL (ENSOGAG00000003793) RPUSD1 (ENSOGAG00000003795) CHTF18 (ENSOGAG00000003797) GNG13 (ENSOGAG00000003802) LMF1 (ENSOGAG00000008409) SOX8 (ENSOGAG00000007992) SSTR5 (ENSOGAG00000010913) C1QTNF8 (ENSOGAG00000009850) TEKT4 (ENSOGAG00000025332) BAIAP3 (ENSOGAG00000001430) #23 CACNA1H (ENSOGAG00000012907) TPSG1 (ENSOGAG00000012919) ENSOGAG00000032452 ENSOGAG00000012923 ENSOGAG00000032629 UBE2I (ENSOGAG00000001428) #22 TSR3 (ENSOGAG00000001433) GNPTG (ENSOGAG00000001435) UNKL (ENSOGAG00000027777) #27 UQCC4 (ENSOGAG00000029437) CCDC154 (ENSOGAG00000001438) CLCN7 (ENSOGAG00000004362) PTX4 (ENSOGAG00000032762) TELO2 (ENSOGAG00000004371) IFT140 (ENSOGAG00000001245) JPT2 (ENSOGAG00000012638) TMEM204 (ENSOGAG00000001249) CRAMP1 (ENSOGAG00000001253) MAPK8IP3 (ENSOGAG00000012639) NME3 (ENSOGAG00000026071) MRPS34 (ENSOGAG00000012647) Lemuriformes DUPLICATION Lemuriformes DUPLICATION Lemuriformes ANCESTRAL SPECIES 27 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207 ENSGT00940000158868 ENSGT00550000075088.a.a.k.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Mouse lemur MODERN SPECIES 8 HAGHL (ENSMICG00000010673) CIAO3 (ENSMICG00000032862) MSLN (ENSMICG00000033271) MSLNL (ENSMICG00000017560) RPUSD1 (ENSMICG00000017561) CHTF18 (ENSMICG00000017562) GNG13 (ENSMICG00000017563) ENSMICG00000045572 SOX8 (ENSMICG00000011516) C1QTNF8 (ENSMICG00000005932) TEKT4 (ENSMICG00000037206) CACNA1H (ENSMICG00000027405) TPSG1 (ENSMICG00000045902) ENSMICG00000006833 ENSMICG00000004987 UBE2I (ENSMICG00000030413) #22 BAIAP3 (ENSMICG00000031314) #23 TSR3 (ENSMICG00000045072) GNPTG (ENSMICG00000047931) UNKL (ENSMICG00000007141) #27 UQCC4 (ENSMICG00000047600) CCDC154 (ENSMICG00000013192) CLCN7 (ENSMICG00000013205) PTX4 (ENSMICG00000000217) TELO2 (ENSMICG00000000220) IFT140 (ENSMICG00000014051) TMEM204 (ENSMICG00000042845) CRAMP1 (ENSMICG00000014094) JPT2 (ENSMICG00000026714) MAPK8IP3 (ENSMICG00000002091) NME3 (ENSMICG00000030545) Lemuriformes_a ANCESTRAL SPECIES 23 ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207 ENSGT00940000158868 ENSGT00550000075088.a.a.k.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000169717 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652.i Greater bamboo lemur MODERN SPECIES 390 ENSPSMG00000024893 UBE2I (ENSPSMG00000024884) #22 ENSPSMG00000024876 TSR3 (ENSPSMG00000024865) ENSPSMG00000024860 UNKL (ENSPSMG00000024857) #27 UQCC4 (ENSPSMG00000024850) CCDC154 (ENSPSMG00000024847) CLCN7 (ENSPSMG00000024837) PTX4 (ENSPSMG00000024796) TELO2 (ENSPSMG00000024784) TMEM204 (ENSPSMG00000024736) IFT140 (ENSPSMG00000024730) CRAMP1 (ENSPSMG00000024711) JPT2 (ENSPSMG00000024685) MAPK8IP3 (ENSPSMG00000024595) NME3 (ENSPSMG00000024387) Coquerels sifaka MODERN SPECIES 384 SOX8 (ENSPCOG00000022917) C1QTNF8 (ENSPCOG00000014214) TEKT4 (ENSPCOG00000012465) CACNA1H (ENSPCOG00000024375) ENSPCOG00000021145 ENSPCOG00000004340 ENSPCOG00000021989 ENSPCOG00000021941 #22 BAIAP3 (ENSPCOG00000021367) #23 TSR3 (ENSPCOG00000027967) GNPTG (ENSPCOG00000015436) ENSPCOG00000005384 UNKL (ENSPCOG00000017889) #27 UQCC4 (ENSPCOG00000017870) PERCC1 (ENSPCOG00000019562) CCDC154 (ENSPCOG00000027402) CLCN7 (ENSPCOG00000023505) PTX4 (ENSPCOG00000025173) TELO2 (ENSPCOG00000022795) IFT140 (ENSPCOG00000023133) TMEM204 (ENSPCOG00000027514) CRAMP1 (ENSPCOG00000004847) ENSPCOG00000028105 Lemuriformes ANCESTRAL SPECIES ENSGT00550000075088.a.a.k.b #22 Lemuriformes_a ANCESTRAL SPECIES ENSGT00550000075088.a.a.k.b #22 Coquerels sifaka MODERN SPECIES 183 FBP1 (ENSPCOG00000015361) AOPEP (ENSPCOG00000006425) FANCC (ENSPCOG00000014570) ENSPCOG00000004160 PTCH1 (ENSPCOG00000023287) ENSPCOG00000026714 ENSPCOG00000011696 #22 HSD17B3 (ENSPCOG00000024790) SLC35D2 (ENSPCOG00000027921) ZNF367 (ENSPCOG00000014992) HABP4 (ENSPCOG00000019941) ENSPCOG00000021943 ENSPCOG00000025613 ENSPCOG00000013882 ENSPCOG00000008223 GOLM1 (ENSPCOG00000024941) ENSPCOG00000015887 AGTPBP1 (ENSPCOG00000019757) NTRK2 (ENSPCOG00000003483) SLC28A3 (ENSPCOG00000024757) HNRNPK (ENSPCOG00000016433) C9orf64 (ENSPCOG00000023356) Lemuriformes ANCESTRAL SPECIES ENSGT00550000075088.a.a.l #22 Lemuriformes_a ANCESTRAL SPECIES ENSGT00550000075088.a.a.l #22 Greater bamboo lemur MODERN SPECIES 1236 ENSPSMG00000009660 ENSPSMG00000009644 ENSPSMG00000009641 ENSPSMG00000009620 #22 HSD17B3 (ENSPSMG00000009565) SLC35D2 (ENSPSMG00000009490) ZNF367 (ENSPSMG00000009447) HABP4 (ENSPSMG00000009432) ENSPSMG00000009328 Euarchontoglires_A ANCESTRAL SPECIES 12 ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207 ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 Glires ANCESTRAL SPECIES 11 ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207 ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 Lagomorpha ANCESTRAL SPECIES ENSGT00550000075088.a.a #22 Rabbit MODERN SPECIES ENSOCUG00000031183 ENSOCUG00000032220 ENSOCUG00000001631 CWC15 (ENSOCUG00000001629) AMOTL1 (ENSOCUG00000001078) PIWIL4 (ENSOCUG00000002860) FUT4 (ENSOCUG00000014204) C11orf97 (ENSOCUG00000034472) ENSOCUG00000033194 ANKRD49 (ENSOCUG00000014912) MRE11 (ENSOCUG00000014899) GPR83 (ENSOCUG00000015502) IZUMO1R (ENSOCUG00000013431) PANX1 (ENSOCUG00000009473) HEPHL1 (ENSOCUG00000009466) ENSOCUG00000029520 #22 VSTM5 (ENSOCUG00000026554) MED17 (ENSOCUG00000012818) C11orf54 (ENSOCUG00000012810) ENSOCUG00000001096 CEP295 (ENSOCUG00000029678) DEUP1 (ENSOCUG00000000199) SLC36A4 (ENSOCUG00000000649) MTNR1B (ENSOCUG00000008196) FAT3 (ENSOCUG00000007427) ENSOCUG00000023399 ENSOCUG00000014147 NAALAD2 (ENSOCUG00000014137) ENSOCUG00000036248 ENSOCUG00000011049 ENSOCUG00000027036 Rodentia ANCESTRAL SPECIES 11 ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207 ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 Rodentia_A ANCESTRAL SPECIES 10 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000163159.b.b ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 Sciuridae ANCESTRAL SPECIES 9 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000163159.b.b ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 Eurasian red squirrel MODERN SPECIES 9 CCDC78 (ENSSVLG00005022677) HAGHL (ENSSVLG00005022767) CIAO3 (ENSSVLG00005022818) ENSSVLG00005022872 RPUSD1 (ENSSVLG00005023215) ENSSVLG00005023269 GNG13 (ENSSVLG00005023379) LMF1 (ENSSVLG00005023404) SOX8 (ENSSVLG00005023486) SSTR5 (ENSSVLG00005023526) C1QTNF8 (ENSSVLG00005023545) TEKT4 (ENSSVLG00005023591) CACNA1H (ENSSVLG00005023660) ENSSVLG00005023883 ENSSVLG00005024075 UBE2I (ENSSVLG00005024408) #22 TSR3 (ENSSVLG00005024904) GNPTG (ENSSVLG00005024947) ENSSVLG00005024973 UNKL (ENSSVLG00005017152) #27 UQCC4 (ENSSVLG00005017225) PERCC1 (ENSSVLG00005017276) CCDC154 (ENSSVLG00005017302) CLCN7 (ENSSVLG00005017491) PTX4 (ENSSVLG00005017820) TELO2 (ENSSVLG00005017874) IFT140 (ENSSVLG00005017909) TMEM204 (ENSSVLG00005017964) CRAMP1 (ENSSVLG00005018001) JPT2 (ENSSVLG00005018232) MAPK8IP3 (ENSSVLG00005018319) Marmotini DUPLICATION Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES ENSGT00550000075088.a.a.m.a #22 Alpin marmot MODERN SPECIES 19 CCDC14 (ENSMMMG00000013192) ENSMMMG00000013183 ENSMMMG00000013014 ENSMMMG00000012981 ENSMMMG00000012738 UMPS (ENSMMMG00000012713) ENSMMMG00000012704 ITGB5 (ENSMMMG00000012679) ENSMMMG00000012665 SLC12A8 (ENSMMMG00000012328) ZNF148 (ENSMMMG00000012274) ENSMMMG00000012255 SNX4 (ENSMMMG00000012229) GNG5B (ENSMMMG00000012223) ENSMMMG00000012176 ENSMMMG00000012158 #22 XXYLT1 (ENSMMMG00000012143) ACAP2 (ENSMMMG00000011132) ENSMMMG00000011097 APOD (ENSMMMG00000011088) BDH1 (ENSMMMG00000011058) DLG1 (ENSMMMG00000010315) MELTF (ENSMMMG00000010259) ENSMMMG00000010247 NCBP2AS2 (ENSMMMG00000010243) NCBP2 (ENSMMMG00000010231) SENP5 (ENSMMMG00000010197) ENSMMMG00000010189 PAK2 (ENSMMMG00000010171) PIGX (ENSMMMG00000010154) CEP19 (ENSMMMG00000010134) Marmotini_b ANCESTRAL SPECIES ENSGT00550000075088.a.a.m.a #22 Arctic ground squirrel MODERN SPECIES 726 XXYLT1 (ENSUPAG00010014383) ENSUPAG00010014397 #22 ACAP2 (ENSUPAG00010014407) ENSUPAG00010014625 APOD (ENSUPAG00010014631) Squirrel MODERN SPECIES 355 SLC5A4 (ENSSTOG00000006571) DEPDC5 (ENSSTOG00000019672) PRR14L (ENSSTOG00000033920) PISD (ENSSTOG00000013586) SFI1 (ENSSTOG00000013574) EIF4ENIF1 (ENSSTOG00000014197) ENSSTOG00000014187 PATZ1 (ENSSTOG00000020707) PIK3IP1 (ENSSTOG00000015525) LIMK2 (ENSSTOG00000024986) RNF185 (ENSSTOG00000026718) PLA2G3 (ENSSTOG00000002253) INPP5J (ENSSTOG00000002241) SELENOM (ENSSTOG00000029487) SMTN (ENSSTOG00000002222) ENSSTOG00000031763 #22 MORC2 (ENSSTOG00000014078) OSBP2 (ENSSTOG00000013957) Marmotini ANCESTRAL SPECIES 3 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000163159.b.b ENSGT00940000158868 ENSGT00550000075088.a.a.m.b #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Alpin marmot MODERN SPECIES 28 MSLN (ENSMMMG00000017881) RPUSD1 (ENSMMMG00000017848) ENSMMMG00000017827 GNG13 (ENSMMMG00000017822) LMF1 (ENSMMMG00000017724) SOX8 (ENSMMMG00000017696) SSTR5 (ENSMMMG00000017693) C1QTNF8 (ENSMMMG00000017687) TEKT4 (ENSMMMG00000017681) ENSMMMG00000017663 ENSMMMG00000017657 ENSMMMG00000016915 ENSMMMG00000016356 ENSMMMG00000016343 ENSMMMG00000015984 ENSMMMG00000015935 #22 ENSMMMG00000015930 ENSMMMG00000015922 #23 TSR3 (ENSMMMG00000015912) UNKL (ENSMMMG00000015853) #27 UQCC4 (ENSMMMG00000015846) PERCC1 (ENSMMMG00000015837) CCDC154 (ENSMMMG00000015727) CLCN7 (ENSMMMG00000015689) PTX4 (ENSMMMG00000015680) TELO2 (ENSMMMG00000015629) TMEM204 (ENSMMMG00000015619) IFT140 (ENSMMMG00000015580) CRAMP1 (ENSMMMG00000015511) JPT2 (ENSMMMG00000015507) MAPK8IP3 (ENSMMMG00000011208) Marmotini_b ANCESTRAL SPECIES 1 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000163159.b.b ENSGT00940000158868 ENSGT00550000075088.a.a.m.b #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Squirrel MODERN SPECIES 294 ENSSTOG00000022453 ENSSTOG00000028353 ENSSTOG00000033557 ENSSTOG00000003188 ENSSTOG00000000724 ENSSTOG00000024974 Ube2i (ENSSTOG00000010233) #22 BAIAP3 (ENSSTOG00000015767) #23 TSR3 (ENSSTOG00000015781) GNPTG (ENSSTOG00000019834) UNKL (ENSSTOG00000003487) #27 UQCC4 (ENSSTOG00000003515) CCDC154 (ENSSTOG00000003540) CLCN7 (ENSSTOG00000023676) PTX4 (ENSSTOG00000003603) TELO2 (ENSSTOG00000003610) TMEM204 (ENSSTOG00000021652) IFT140 (ENSSTOG00000003636) CRAMP1 (ENSSTOG00000003675) ENSSTOG00000025346 JPT2 (ENSSTOG00000003729) MAPK8IP3 (ENSSTOG00000003734) Arctic ground squirrel MODERN SPECIES 37 HAGHL (ENSUPAG00010013859) CIAO3 (ENSUPAG00010013894) MSLN (ENSUPAG00010013909) RPUSD1 (ENSUPAG00010013939) CHTF18 (ENSUPAG00010013947) GNG13 (ENSUPAG00010014002) LMF1 (ENSUPAG00010014011) SOX8 (ENSUPAG00010014033) SSTR5 (ENSUPAG00010014041) C1QTNF8 (ENSUPAG00010014043) TEKT4 (ENSUPAG00010014054) CACNA1H (ENSUPAG00010014075) ENSUPAG00010014123 ENSUPAG00010014138 ENSUPAG00010014146 ENSUPAG00010014457 #22 ENSUPAG00010014489 TSR3 (ENSUPAG00010014534) GNPTG (ENSUPAG00010014541) UNKL (ENSUPAG00010014554) #27 UQCC4 (ENSUPAG00010014604) PERCC1 (ENSUPAG00010014611) CCDC154 (ENSUPAG00010014614) CLCN7 (ENSUPAG00010014777) ENSUPAG00010014893 TELO2 (ENSUPAG00010014896) IFT140 (ENSUPAG00010014979) TMEM204 (ENSUPAG00010015069) CRAMP1 (ENSUPAG00010015084) JPT2 (ENSUPAG00010015162) MAPK8IP3 (ENSUPAG00010015185) Marmotini ANCESTRAL SPECIES ENSGT00550000075088.a.a.n #22 Marmotini_b ANCESTRAL SPECIES ENSGT00550000075088.a.a.n #22 Arctic ground squirrel MODERN SPECIES 402 DEPDC5 (ENSUPAG00010019708) ENSUPAG00010019939 PISD (ENSUPAG00010019949) SFI1 (ENSUPAG00010019956) EIF4ENIF1 (ENSUPAG00010020012) DRG1 (ENSUPAG00010020857) PATZ1 (ENSUPAG00010020871) PIK3IP1 (ENSUPAG00010020895) LIMK2 (ENSUPAG00010020912) RNF185 (ENSUPAG00010020940) PLA2G3 (ENSUPAG00010020956) INPP5J (ENSUPAG00010020980) SELENOM (ENSUPAG00010021022) SMTN (ENSUPAG00010021034) ENSUPAG00010021097 ENSUPAG00010021098 #22 MORC2 (ENSUPAG00010021114) OSBP2 (ENSUPAG00010021153) ENSUPAG00010021198 SLC35E4 (ENSUPAG00010021204) TCN2 (ENSUPAG00010021207) PES1 (ENSUPAG00010021228) GAL3ST1 (ENSUPAG00010021248) ENSUPAG00010021253 SEC14L4 (ENSUPAG00010021259) SEC14L3 (ENSUPAG00010021269) MTFP1 (ENSUPAG00010021283) SEC14L2 (ENSUPAG00010021289) RNF215 (ENSUPAG00010021301) CCDC157 (ENSUPAG00010021311) SF3A1 (ENSUPAG00010021317) Hystricomorpha ANCESTRAL SPECIES ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000163159.b.b ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Hystricomorpha_a ANCESTRAL SPECIES 2 ENSGT00940000161924 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000163159.b.b.e ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Guinea pig MODERN SPECIES 4 RPUSD1 (ENSCPOG00000034604) CHTF18 (ENSCPOG00000010100) GNG13 (ENSCPOG00000010114) LMF1 (ENSCPOG00000007844) SOX8 (ENSCPOG00000002664) SSTR5 (ENSCPOG00000022586) TEKT4 (ENSCPOG00000004254) CACNA1H (ENSCPOG00000012293) ENSCPOG00000033452 ENSCPOG00000040644 ENSCPOG00000038978 ENSCPOG00000037807 ENSCPOG00000030620 ENSCPOG00000033354 ENSCPOG00000014280 UBE2I (ENSCPOG00000035983) #22 BAIAP3 (ENSCPOG00000010436) #23 TSR3 (ENSCPOG00000010452) GNPTG (ENSCPOG00000014046) UNKL (ENSCPOG00000011846) #27 UQCC4 (ENSCPOG00000031653) CCDC154 (ENSCPOG00000012968) CLCN7 (ENSCPOG00000012975) PTX4 (ENSCPOG00000007357) TELO2 (ENSCPOG00000003304) IFT140 (ENSCPOG00000003314) TMEM204 (ENSCPOG00000030328) CRAMP1 (ENSCPOG00000005336) JPT2 (ENSCPOG00000032923) MAPK8IP3 (ENSCPOG00000005354) NME3 (ENSCPOG00000035161) Hystricomorpha_b ANCESTRAL SPECIES 1 ENSGT00940000161924 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000163159.b.b.e ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 284 ENSODEG00000018629 MID1IP1 (ENSODEG00000018674) TSPAN7 (ENSODEG00000001070) ENSODEG00000001041 #22 OTC (ENSODEG00000001030) SRPX (ENSODEG00000000995) SYTL5 (ENSODEG00000000905) ENSODEG00000000840 CYBB (ENSODEG00000000820) XK (ENSODEG00000000796) LANCL3 (ENSODEG00000002765) PRRG1 (ENSODEG00000002742) Degu MODERN SPECIES 65 ENSODEG00000008972 ENSODEG00000008225 CITED2 (ENSODEG00000008037) TXLNB (ENSODEG00000007403) ENSODEG00000009585 ENSODEG00000009153 ENSODEG00000008655 REPS1 (ENSODEG00000007604) ECT2L (ENSODEG00000011163) ENSODEG00000009856 ENSODEG00000009581 ENSODEG00000009059 ENSODEG00000007997 NHSL1 (ENSODEG00000008039) HEBP2 (ENSODEG00000007586) ENSODEG00000009708 #22 ARFGEF3 (ENSODEG00000008382) ENSODEG00000008459 TNFAIP3 (ENSODEG00000008925) ENSODEG00000019565 OLIG3 (ENSODEG00000019534) ENSODEG00000019506 ENSODEG00000008408 IL22RA2 (ENSODEG00000007775) IL20RA (ENSODEG00000006756) SLC35D3 (ENSODEG00000006620) ENSODEG00000008240 ENSODEG00000008040 MAP7 (ENSODEG00000008448) ENSODEG00000006806 MTFR2 (ENSODEG00000006976) Degu MODERN SPECIES 204 TRNAU1AP (ENSODEG00000002970) RCC1 (ENSODEG00000003970) PHACTR4 (ENSODEG00000003857) ENSODEG00000018954 ENSODEG00000003828 MED18 (ENSODEG00000003791) SESN2 (ENSODEG00000003769) ATP5IF1 (ENSODEG00000003747) ENSODEG00000003721 PTAFR (ENSODEG00000018990) EYA3 (ENSODEG00000003507) XKR8 (ENSODEG00000003481) ENSODEG00000003467 ENSODEG00000004443 THEMIS2 (ENSODEG00000004403) ENSODEG00000004373 #22 PPP1R8 (ENSODEG00000004352) STX12 (ENSODEG00000004182) ENSODEG00000019037 FAM76A (ENSODEG00000004142) ENSODEG00000019010 FGR (ENSODEG00000004016) AHDC1 (ENSODEG00000019150) WASF2 (ENSODEG00000003793) GPR3 (ENSODEG00000004543) CD164L2 (ENSODEG00000004416) MAP3K6 (ENSODEG00000004172) SYTL1 (ENSODEG00000003707) TMEM222 (ENSODEG00000003675) WDTC1 (ENSODEG00000003804) ENSODEG00000003743 Degu MODERN SPECIES 62 CIAO3 (ENSODEG00000016044) MSLN (ENSODEG00000015072) MSLNL (ENSODEG00000016169) RPUSD1 (ENSODEG00000016945) ENSODEG00000015171 GNG13 (ENSODEG00000015498) LMF1 (ENSODEG00000015293) SOX8 (ENSODEG00000015896) SSTR5 (ENSODEG00000020248) TEKT4 (ENSODEG00000015302) CACNA1H (ENSODEG00000015460) ENSODEG00000014982 ENSODEG00000014697 ENSODEG00000015365 ENSODEG00000015581 ENSODEG00000016190 #22 BAIAP3 (ENSODEG00000015393) #23 TSR3 (ENSODEG00000014546) GNPTG (ENSODEG00000015470) UNKL (ENSODEG00000017747) #27 UQCC4 (ENSODEG00000014612) ENSODEG00000020180 CCDC154 (ENSODEG00000015378) CLCN7 (ENSODEG00000014485) PTX4 (ENSODEG00000014551) TELO2 (ENSODEG00000014830) TMEM204 (ENSODEG00000015065) IFT140 (ENSODEG00000015652) CRAMP1 (ENSODEG00000014456) JPT2 (ENSODEG00000016076) MAPK8IP3 (ENSODEG00000016004) Long-tailed chinchilla MODERN SPECIES 149 CIAO3 (ENSCLAG00000016542) MSLN (ENSCLAG00000016361) MSLNL (ENSCLAG00000013792) RPUSD1 (ENSCLAG00000013966) ENSCLAG00000013648 GNG13 (ENSCLAG00000013499) LMF1 (ENSCLAG00000012588) SOX8 (ENSCLAG00000013288) SSTR5 (ENSCLAG00000016379) TEKT4 (ENSCLAG00000015231) CACNA1H (ENSCLAG00000013993) ENSCLAG00000014024 ENSCLAG00000013616 ENSCLAG00000013087 ENSCLAG00000015166 UBE2I (ENSCLAG00000015675) #22 BAIAP3 (ENSCLAG00000014438) #23 TSR3 (ENSCLAG00000013022) GNPTG (ENSCLAG00000012982) UNKL (ENSCLAG00000015420) #27 UQCC4 (ENSCLAG00000016079) CCDC154 (ENSCLAG00000013674) CLCN7 (ENSCLAG00000014385) PTX4 (ENSCLAG00000015124) TELO2 (ENSCLAG00000012862) TMEM204 (ENSCLAG00000015782) IFT140 (ENSCLAG00000013535) CRAMP1 (ENSCLAG00000013881) JPT2 (ENSCLAG00000014793) MAPK8IP3 (ENSCLAG00000014643) NME3 (ENSCLAG00000015018) Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 22 ENSHGLG00000004703 ENSHGLG00000004915 ENSHGLG00000037940 FLACC1 (ENSHGLG00000007412) ENSHGLG00000040561 ENSHGLG00000039700 ENSHGLG00000032663 ASDURF (ENSHGLG00000029891) SLC40A1 (ENSHGLG00000008999) WDR75 (ENSHGLG00000011577) ENSHGLG00000017600 COL5A2 (ENSHGLG00000001701) COL3A1 (ENSHGLG00000001404) ENSHGLG00000042639 ENSHGLG00000002398 ENSHGLG00000001839 #22 ENSHGLG00000004085 TFPI (ENSHGLG00000002403) CALCRL (ENSHGLG00000037977) ENSHGLG00000032621 ENSHGLG00000018884 ENSHGLG00000013039 ITGAV (ENSHGLG00000019530) ENSHGLG00000044287 ENSHGLG00000039301 ENSHGLG00000045797 GTF3C3 (ENSHGLG00000002660) ENSHGLG00000003131 ENSHGLG00000043744 HECW2 (ENSHGLG00000003406) ENSHGLG00000033429 Naked mole-rat female MODERN SPECIES 11 TTC3 (ENSHGLG00000005139) ENSHGLG00000044048 ENSHGLG00000044887 HLCS (ENSHGLG00000008266) SIM2 (ENSHGLG00000008945) ENSHGLG00000009709 CLDN14 (ENSHGLG00000009298) CHAF1B (ENSHGLG00000010107) ENSHGLG00000020850 ENSHGLG00000035736 MORC3 (ENSHGLG00000018450) ENSHGLG00000015583 ENSHGLG00000036095 ENSHGLG00000035096 ENSHGLG00000004968 ENSHGLG00000042952 #22 HSF2BP (ENSHGLG00000008796) SIK1 (ENSHGLG00000013670) CRYAA (ENSHGLG00000009413) U2AF1 (ENSHGLG00000009841) CBS (ENSHGLG00000015848) PKNOX1 (ENSHGLG00000040628) NDUFV3 (ENSHGLG00000041826) ENSHGLG00000035018 WDR4 (ENSHGLG00000017900) PDE9A (ENSHGLG00000019554) SLC37A1 (ENSHGLG00000008351) RSPH1 (ENSHGLG00000005500) UBASH3A (ENSHGLG00000036614) TMPRSS3 (ENSHGLG00000007911) ENSHGLG00000050421 Naked mole-rat female MODERN SPECIES 15 RPUSD1 (ENSHGLG00000039871) ENSHGLG00000050099 ENSHGLG00000041743 GNG13 (ENSHGLG00000050711) ENSHGLG00000032853 LMF1 (ENSHGLG00000002689) SOX8 (ENSHGLG00000035960) ENSHGLG00000002802 SSTR5 (ENSHGLG00000002823) ENSHGLG00000002851 ENSHGLG00000039271 CACNA1H (ENSHGLG00000002918) ENSHGLG00000041261 ENSHGLG00000046140 ENSHGLG00000048225 UBE2I (ENSHGLG00000047989) #22 BAIAP3 (ENSHGLG00000003395) #23 TSR3 (ENSHGLG00000003477) GNPTG (ENSHGLG00000001484) UNKL (ENSHGLG00000001586) #27 UQCC4 (ENSHGLG00000001649) PERCC1 (ENSHGLG00000042238) CCDC154 (ENSHGLG00000001687) CLCN7 (ENSHGLG00000001793) ENSHGLG00000049637 ENSHGLG00000034352 ENSHGLG00000035369 ENSHGLG00000036303 ENSHGLG00000000262 ENSHGLG00000037206 GSC2 (ENSHGLG00000000434) Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000007878 ATG12 (ENSHGLG00000041482) CDO1 (ENSHGLG00000019411) TMED7 (ENSHGLG00000039198) TICAM2 (ENSHGLG00000033848) FEM1C (ENSHGLG00000043263) ENSHGLG00000037102 CCDC112 (ENSHGLG00000018021) ENSHGLG00000006611 PGGT1B (ENSHGLG00000015333) TRIM36 (ENSHGLG00000010335) ENSHGLG00000043176 ENSHGLG00000014979 ENSHGLG00000013364 ENSHGLG00000005256 ENSHGLG00000034793 #22 YTHDC2 (ENSHGLG00000019014) ENSHGLG00000010581 ENSHGLG00000007853 ENSHGLG00000010612 ENSHGLG00000035334 HNRNPA0 (ENSHGLG00000018216) KLHL3 (ENSHGLG00000034412) SPOCK1 (ENSHGLG00000013253) TRPC7 (ENSHGLG00000014983) ENSHGLG00000048676 SMAD5 (ENSHGLG00000011690) TGFBI (ENSHGLG00000013550) LECT2 (ENSHGLG00000050741) ENSHGLG00000018360 IL9 (ENSHGLG00000015532) Rodentia_B ANCESTRAL SPECIES 15 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207 ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 Kangaroo rat MODERN SPECIES 333 ENSDORG00000030179 ENSDORG00000004577 Ccdc78 (ENSDORG00000004578) Haghl (ENSDORG00000004580) Ciao3 (ENSDORG00000004581) Msln (ENSDORG00000009951) Mslnl (ENSDORG00000009957) Rpusd1 (ENSDORG00000026656) ENSDORG00000029298 Gng13 (ENSDORG00000024959) Sox8 (ENSDORG00000025495) Tekt4 (ENSDORG00000024604) Cacna1h (ENSDORG00000014816) ENSDORG00000014822 Prss29 (ENSDORG00000029349) Ube2i (ENSDORG00000023979) #22 Baiap3 (ENSDORG00000008452) #23 ENSDORG00000008458 Gnptg (ENSDORG00000015662) Unkl (ENSDORG00000015663) #27 Ccdc154 (ENSDORG00000009310) Clcn7 (ENSDORG00000009312) Ptx4 (ENSDORG00000000363) Telo2 (ENSDORG00000004164) Tmem204 (ENSDORG00000028876) Ift140 (ENSDORG00000004166) Cramp1 (ENSDORG00000013715) Jpt2 (ENSDORG00000025742) ENSDORG00000026402 ENSDORG00000009659 ENSDORG00000027160 Myomorpha ANCESTRAL SPECIES 17 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207 ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 47 Ciao3 (ENSJJAG00000015354) Msln (ENSJJAG00000024242) Mslnl (ENSJJAG00000007196) Rpusd1 (ENSJJAG00000015696) Chtf18 (ENSJJAG00000018990) Gng13 (ENSJJAG00000011163) Lmf1 (ENSJJAG00000012934) ENSJJAG00000020117 Sstr5 (ENSJJAG00000012224) Tekt4 (ENSJJAG00000009657) Cacna1h (ENSJJAG00000010593) ENSJJAG00000015444 ENSJJAG00000023979 Prss29 (ENSJJAG00000006993) Prss28 (ENSJJAG00000008115) ENSJJAG00000019500 #22 Baiap3 (ENSJJAG00000014083) #23 Tsr3 (ENSJJAG00000017912) Gnptg (ENSJJAG00000015582) Unkl (ENSJJAG00000011047) #27 Uqcc4 (ENSJJAG00000004240) Ccdc154 (ENSJJAG00000000910) Clcn7 (ENSJJAG00000022469) Ptx4 (ENSJJAG00000023455) Telo2 (ENSJJAG00000019914) Ift140 (ENSJJAG00000015483) Tmem204 (ENSJJAG00000016676) Cramp1 (ENSJJAG00000019556) ENSJJAG00000022922 Mapk8ip3 (ENSJJAG00000012043) Nme3 (ENSJJAG00000014938) Lesser Egyptian jerboa MODERN SPECIES 69 ENSJJAG00000020933 ENSJJAG00000017574 ENSJJAG00000018212 ENSJJAG00000012278 Lhfpl1 (ENSJJAG00000015318) Trpc5 (ENSJJAG00000024433) Glt28d2 (ENSJJAG00000013741) A730046J19Rik (ENSJJAG00000010844) Dcx (ENSJJAG00000015630) Capn6 (ENSJJAG00000014765) Pak3 (ENSJJAG00000013664) Chrdl1 (ENSJJAG00000006431) Rtl9 (ENSJJAG00000006610) Ammecr1 (ENSJJAG00000021786) Tmem164 (ENSJJAG00000000642) ENSJJAG00000021750 #22 Acsl4 (ENSJJAG00000019922) Kcne1l (ENSJJAG00000010943) ENSJJAG00000000326 Gucy2f (ENSJJAG00000013450) Irs4 (ENSJJAG00000019173) Col4a5 (ENSJJAG00000016139) Col4a6 (ENSJJAG00000009572) ENSJJAG00000016735 ENSJJAG00000024402 Vsig1 (ENSJJAG00000023660) Mid2 (ENSJJAG00000013524) ENSJJAG00000019295 ENSJJAG00000007049 ENSJJAG00000002094 ENSJJAG00000012647 Muroidea ANCESTRAL SPECIES 10 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207.j ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1760 Ciao3 (ENSNGAG00000011158) Msln (ENSNGAG00000013460) Mslnl (ENSNGAG00000015333) Rpusd1 (ENSNGAG00000003595) Chtf18 (ENSNGAG00000020604) Gng13 (ENSNGAG00000021017) Lmf1 (ENSNGAG00000018740) Sox8 (ENSNGAG00000021786) Sstr5 (ENSNGAG00000011736) Tekt4 (ENSNGAG00000017005) ENSNGAG00000021753 Tpsg1 (ENSNGAG00000024356) Tpsb2 (ENSNGAG00000016634) Prss29 (ENSNGAG00000019360) Prss34 (ENSNGAG00000013475) ENSNGAG00000019007 #22 Baiap3 (ENSNGAG00000024206) #23 Tsr3 (ENSNGAG00000003886) Gnptg (ENSNGAG00000010304) Unkl (ENSNGAG00000002821) #27 Uqcc4 (ENSNGAG00000024109) Clcn7 (ENSNGAG00000022952) Telo2 (ENSNGAG00000020065) ENSNGAG00000010476 Tmem204 (ENSNGAG00000016981) ENSNGAG00000019576 Cramp1 (ENSNGAG00000012239) Jpt2 (ENSNGAG00000021166) Mapk8ip3 (ENSNGAG00000021573) Nme3 (ENSNGAG00000022562) Mrps34 (ENSNGAG00000023629) Upper Galilee mountains blind mole rat MODERN SPECIES 1878 ENSNGAG00000011492 Usp12 (ENSNGAG00000023867) ENSNGAG00000012493 ENSNGAG00000022375 Rasl11a (ENSNGAG00000021721) Gtf3a (ENSNGAG00000023691) Mtif3 (ENSNGAG00000022911) Lnx2 (ENSNGAG00000010972) Polr1d (ENSNGAG00000006014) ENSNGAG00000019459 ENSNGAG00000020643 #22 Gsx1 (ENSNGAG00000013964) ENSNGAG00000011527 Pdx1 (ENSNGAG00000024275) Cdx2 (ENSNGAG00000019299) Flt3 (ENSNGAG00000022203) Pan3 (ENSNGAG00000005671) Flt1 (ENSNGAG00000022615) ENSNGAG00000019389 Slc46a3 (ENSNGAG00000023221) ENSNGAG00000022087 ENSNGAG00000011243 ENSNGAG00000023043 Slc7a1 (ENSNGAG00000011095) Ubl3 (ENSNGAG00000021531) Katnal1 (ENSNGAG00000018344) Muroidea_A ANCESTRAL SPECIES 1 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207.j ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00910000147428 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 Murinae DUPLICATION Murinae ANCESTRAL SPECIES ENSGT00550000075088.a.a.w #22 Rat DUPLICATION Rat DUPLICATION Rat MODERN SPECIES 1 Rpusd1 (ENSRNOG00000023639) Chtf18 (ENSRNOG00000019174) Gng13 (ENSRNOG00000039350) Lmf1 (ENSRNOG00000000230) Sox8 (ENSRNOG00000018841) Sstr5 (ENSRNOG00000018834) Tekt4 (ENSRNOG00000018792) Cacna1h (ENSRNOG00000033893) Tpsg1 (ENSRNOG00000018701) Tpsb2 (ENSRNOG00000018611) Tpsab1 (ENSRNOG00000024181) RGD1559662 (ENSRNOG00000028926) Prss29 (ENSRNOG00000039405) Prss28l-ps1 (ENSRNOG00000058976) Prss34 (ENSRNOG00000018466) Ube2i (ENSRNOG00000066579) #22 Baiap3 (ENSRNOG00000017893) #23 Tsr3 (ENSRNOG00000017858) Gnptg (ENSRNOG00000024455) Unkl (ENSRNOG00000054605) #27 Uqcc4 (ENSRNOG00000029415) Snrpc-ps3 (ENSRNOG00000017586) Percc1 (ENSRNOG00000065484) Ccdc154 (ENSRNOG00000030541) Clcn7 (ENSRNOG00000016976) Ptx4 (ENSRNOG00000060934) Telo2 (ENSRNOG00000016774) Tmem204 (ENSRNOG00000016494) Ift140 (ENSRNOG00000016545) Cramp1 (ENSRNOG00000024635) Jpt2 (ENSRNOG00000024661) Rat MODERN SPECIES 1 AABR07030143.1 (ENSRNOG00000057390) Wfdc21 (ENSRNOG00000029668) Heatr6 (ENSRNOG00000002542) Hnf1b (ENSRNOG00000002598) Ddx52 (ENSRNOG00000002612) Synrg (ENSRNOG00000053814) Ac1576 (ENSRNOG00000058372) Dusp14 (ENSRNOG00000030091) Tada2a (ENSRNOG00000002757) Acaca (ENSRNOG00000034013) LOC102552988 (ENSRNOG00000028116) Aatf (ENSRNOG00000002778) Lhx1 (ENSRNOG00000002812) Mrm1 (ENSRNOG00000027901) Dhrs11 (ENSRNOG00000027891) Ube2i (ENSRNOG00000017907) #22 Ggnbp2 (ENSRNOG00000027860) Pigw (ENSRNOG00000027857) Myo19 (ENSRNOG00000002852) Znhit3 (ENSRNOG00000063476) Car4 (ENSRNOG00000002916) ENSRNOG00000067083 Usp32 (ENSRNOG00000027711) ENSRNOG00000069734 Chct1 (ENSRNOG00000003143) Appbp2 (ENSRNOG00000027654) AABR07030162.1 (ENSRNOG00000031560) Ppm1d (ENSRNOG00000003329) Bcas3 (ENSRNOG00000066893) Tbx2 (ENSRNOG00000003517) Tbx4 (ENSRNOG00000003544) Rat MODERN SPECIES 15 Zfp292 (ENSRNOG00000031031) ENSRNOG00000063545 Cga (ENSRNOG00000009269) Mob3b (ENSRNOG00000009453) Ifnk (ENSRNOG00000022990) RGD1359108 (ENSRNOG00000009478) Lingo2 (ENSRNOG00000005634) RGD1306195 (ENSRNOG00000031013) Aco1 (ENSRNOG00000005849) Rig1 (ENSRNOG00000006384) Topors (ENSRNOG00000006485) Smim27 (ENSRNOG00000069822) Ndufb6 (ENSRNOG00000024539) ENSRNOG00000064831 Tmem215 (ENSRNOG00000042246) ENSRNOG00000063142 #22 Aptx (ENSRNOG00000006582) Dnaja1 (ENSRNOG00000007029) Smu1 (ENSRNOG00000007671) B4galt1 (ENSRNOG00000059461) Spink4 (ENSRNOG00000008252) Bag1 (ENSRNOG00000008277) Chmp5 (ENSRNOG00000008672) Nfx1 (ENSRNOG00000009015) Aqp7 (ENSRNOG00000009686) Aqp3 (ENSRNOG00000009797) Nol6 (ENSRNOG00000010409) Ube2r2 (ENSRNOG00000010727) Ubap2 (ENSRNOG00000052087) LOC683961 (ENSRNOG00000048698) Dcaf12 (ENSRNOG00000050790) Mus ANCESTRAL SPECIES ENSGT00550000075088.a.a.w #22 Mus_A ANCESTRAL SPECIES ENSGT00550000075088.a.a.w #22 Mus_B ANCESTRAL SPECIES ENSGT00550000075088.a.a.w #22 Mus_C ANCESTRAL SPECIES ENSGT00550000075088.a.a.w #22 Steppe mouse MODERN SPECIES 276 ENSMSIG00000030103 ENSMSIG00000030101 ENSMSIG00000030091 #22 ENSMSIG00000030090 Fut10 (ENSMSIG00000030089) Mak16 (ENSMSIG00000030085) Tti2 (ENSMSIG00000030083) Rnf122 (ENSMSIG00000030078) Dusp26 (ENSMSIG00000030077) ENSMSIG00000030072 Eif4ebp1 (ENSMSIG00000030071) Adrb3 (ENSMSIG00000030070) Got1l1 (ENSMSIG00000030066) Rab11fip1 (ENSMSIG00000030062) Brf2 (ENSMSIG00000030061) Adgra2 (ENSMSIG00000030051) Plpbp (ENSMSIG00000030040) ENSMSIG00000030037 Murinae ANCESTRAL SPECIES 7 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207.j ENSGT00940000162207.i ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a.x #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822.l #27 ENSGT00910000147428 ENSGT00940000158822.k #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 Rat MODERN SPECIES 5 Zcchc4 (ENSRNOG00000029064) Anapc4 (ENSRNOG00000004130) Slc34a2 (ENSRNOG00000004626) Sel1l3 (ENSRNOG00000004932) AABR07015507.1 (ENSRNOG00000051190) LOC100361259 (ENSRNOG00000055911) Rbpj (ENSRNOG00000046327) Cckar (ENSRNOG00000043124) Tbc1d19 (ENSRNOG00000003003) Stim2 (ENSRNOG00000002956) ENSRNOG00000067114 Pcdh7 (ENSRNOG00000012367) Pcdh7 (ENSRNOG00000063828) ENSRNOG00000067336 AABR07015346.1 (ENSRNOG00000027791) ENSRNOG00000065159 #22 LOC108348204 (ENSRNOG00000063351) ENSRNOG00000065472 Arap2 (ENSRNOG00000056826) AABR07015180.1 (ENSRNOG00000026134) Nwd2 (ENSRNOG00000051837) LOC498368 (ENSRNOG00000002191) Rell1 (ENSRNOG00000002192) Pgm2 (ENSRNOG00000002185) Tbc1d1 (ENSRNOG00000002180) Klf3 (ENSRNOG00000002163) Tlr10 (ENSRNOG00000067138) Tlr1 (ENSRNOG00000038722) Tlr6 (ENSRNOG00000002161) Fam114a1 (ENSRNOG00000026504) Tmem156 (ENSRNOG00000026518) Mus ANCESTRAL SPECIES 21 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207.j ENSGT00940000162207.i ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a.x #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822.l #27 ENSGT00910000147428 ENSGT00940000158822.k #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 Shrew mouse MODERN SPECIES 13 Mslnl (MGP_PahariEiJ_G0023563) Rpusd1 (MGP_PahariEiJ_G0023562) Chtf18 (MGP_PahariEiJ_G0023561) Gng13 (MGP_PahariEiJ_G0023560) Lmf1 (MGP_PahariEiJ_G0023559) Sox8 (MGP_PahariEiJ_G0023558) Sstr5 (MGP_PahariEiJ_G0023557) Tekt4 (MGP_PahariEiJ_G0023556) Cacna1h (MGP_PahariEiJ_G0023555) Tpsg1 (MGP_PahariEiJ_G0023554) MGP_PahariEiJ_G0023553 Tpsab1 (MGP_PahariEiJ_G0023552) Prss29 (MGP_PahariEiJ_G0023551) Prss28 (MGP_PahariEiJ_G0023550) Prss34 (MGP_PahariEiJ_G0023549) Ube2i (MGP_PahariEiJ_G0023548) #22 Baiap3 (MGP_PahariEiJ_G0023547) #23 Tsr3 (MGP_PahariEiJ_G0023546) Gnptg (MGP_PahariEiJ_G0023545) MGP_PahariEiJ_G0023544 #27 Unkl (MGP_PahariEiJ_G0023543) #27 Uqcc4 (MGP_PahariEiJ_G0023542) Ccdc154 (MGP_PahariEiJ_G0023541) Clcn7 (MGP_PahariEiJ_G0023540) Ptx4 (MGP_PahariEiJ_G0023539) Telo2 (MGP_PahariEiJ_G0023538) Tmem204 (MGP_PahariEiJ_G0023537) Ift140 (MGP_PahariEiJ_G0023536) Cramp1 (MGP_PahariEiJ_G0023535) MGP_PahariEiJ_G0023534 MGP_PahariEiJ_G0023533 Mus_A DUPLICATION Mus_A ANCESTRAL SPECIES 10 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207.j ENSGT00940000162207.i ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a.x.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822.l #27 ENSGT00910000147428 ENSGT00940000158822.k #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 Mus_B ANCESTRAL SPECIES 9 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207.j ENSGT00940000162207.i ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a.x.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665.b ENSGT00510000048359 ENSGT00940000158822.l #27 ENSGT00910000147428 ENSGT00940000158822.k #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 Mouse MODERN SPECIES 8 Mslnl (ENSMUSG00000041062) Rpusd1 (ENSMUSG00000041199) Chtf18 (ENSMUSG00000019214) Gng13 (ENSMUSG00000025739) Lmf1 (ENSMUSG00000002279) Sox8 (ENSMUSG00000024176) Sstr5 (ENSMUSG00000050824) Tekt4 (ENSMUSG00000024175) Cacna1h (ENSMUSG00000024112) Tpsg1 (ENSMUSG00000033200) Tpsb2 (ENSMUSG00000033825) Tpsab1 (ENSMUSG00000024173) Prss29 (ENSMUSG00000034039) Prss28 (ENSMUSG00000024171) Prss34 (ENSMUSG00000056399) Ube2i (ENSMUSG00000015120) #22 Baiap3 (ENSMUSG00000047507) #23 Tsr3 (ENSMUSG00000015126) Gnptg (ENSMUSG00000035521) Unkl (ENSMUSG00000015127) #27 Uqcc4 (ENSMUSG00000067722) Percc1 (ENSMUSG00000114245) Ccdc154 (ENSMUSG00000059562) Clcn7 (ENSMUSG00000036636) Ptx4 (ENSMUSG00000044172) Telo2 (ENSMUSG00000024170) Tmem204 (ENSMUSG00000024168) Ift140 (ENSMUSG00000024169) Cramp1 (ENSMUSG00000038002) Jpt2 (ENSMUSG00000024165) Nme3 (ENSMUSG00000073435) Mus_C ANCESTRAL SPECIES 9 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207.j ENSGT00940000162207.i ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a.x.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665.b ENSGT00510000048359 ENSGT00940000158822.l #27 ENSGT00910000147428 ENSGT00940000158822.k #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652.q.b Steppe mouse MODERN SPECIES 3126 Mslnl (ENSMSIG00000012859) Rpusd1 (ENSMSIG00000012834) Chtf18 (ENSMSIG00000012758) ENSMSIG00000012733 Lmf1 (ENSMSIG00000012704) Sox8 (ENSMSIG00000012675) Sstr5 (ENSMSIG00000012666) Tekt4 (ENSMSIG00000012644) Cacna1h (ENSMSIG00000012417) Tpsg1 (ENSMSIG00000012348) Tpsb2 (ENSMSIG00000012330) Tpsab1 (ENSMSIG00000012313) Prss29 (ENSMSIG00000012288) Prss28 (ENSMSIG00000012265) Prss34 (ENSMSIG00000012219) Ube2i (ENSMSIG00000012009) #22 Baiap3 (ENSMSIG00000011451) #23 ENSMSIG00000011425 Gnptg (ENSMSIG00000011397) ENSMSIG00000011382 Unkl (ENSMSIG00000011290) #27 ENSMSIG00000011275 Ccdc154 (ENSMSIG00000011172) Clcn7 (ENSMSIG00000011010) Ptx4 (ENSMSIG00000010971) Telo2 (ENSMSIG00000010889) Tmem204 (ENSMSIG00000010873) Ift140 (ENSMSIG00000010724) Cramp1 (ENSMSIG00000010664) ENSMSIG00000010638 Mapk8ip3 (ENSMSIG00000008777) Ryukyu mouse MODERN SPECIES 8 Mslnl (MGP_CAROLIEiJ_G0021245) Rpusd1 (MGP_CAROLIEiJ_G0021244) Chtf18 (MGP_CAROLIEiJ_G0021243) Gng13 (MGP_CAROLIEiJ_G0021242) Lmf1 (MGP_CAROLIEiJ_G0021241) Sox8 (MGP_CAROLIEiJ_G0021240) Sstr5 (MGP_CAROLIEiJ_G0021239) Tekt4 (MGP_CAROLIEiJ_G0021238) Cacna1h (MGP_CAROLIEiJ_G0021237) Tpsg1 (MGP_CAROLIEiJ_G0021236) Tpsb2 (MGP_CAROLIEiJ_G0021235) Tpsab1 (MGP_CAROLIEiJ_G0021234) Prss29 (MGP_CAROLIEiJ_G0021233) Prss28 (MGP_CAROLIEiJ_G0021232) Prss34 (MGP_CAROLIEiJ_G0021231) Ube2i (MGP_CAROLIEiJ_G0021230) #22 Baiap3 (MGP_CAROLIEiJ_G0021229) #23 Tsr3 (MGP_CAROLIEiJ_G0021228) Gnptg (MGP_CAROLIEiJ_G0021227) MGP_CAROLIEiJ_G0021226 #27 Unkl (MGP_CAROLIEiJ_G0021225) #27 Uqcc4 (MGP_CAROLIEiJ_G0021224) Ccdc154 (MGP_CAROLIEiJ_G0021223) Clcn7 (MGP_CAROLIEiJ_G0021222) Ptx4 (MGP_CAROLIEiJ_G0021221) Telo2 (MGP_CAROLIEiJ_G0021220) Tmem204 (MGP_CAROLIEiJ_G0021219) Ift140 (MGP_CAROLIEiJ_G0021218) Cramp1 (MGP_CAROLIEiJ_G0021217) MGP_CAROLIEiJ_G0021216 Nme3 (MGP_CAROLIEiJ_G0021215) Mus_A ANCESTRAL SPECIES ENSGT00550000075088.a.a.x.b #22 Mus_B ANCESTRAL SPECIES ENSGT00550000075088.a.a.x.b #22 Mus_C ANCESTRAL SPECIES ENSGT00550000075088.a.a.x.b #22 spretus MODERN SPECIES 8 Mslnl (MGP_SPRETEiJ_G0022156) Rpusd1 (MGP_SPRETEiJ_G0022155) Chtf18 (MGP_SPRETEiJ_G0022154) Gng13 (MGP_SPRETEiJ_G0022153) Lmf1 (MGP_SPRETEiJ_G0022152) Sox8 (MGP_SPRETEiJ_G0022151) Sstr5 (MGP_SPRETEiJ_G0022150) Tekt4 (MGP_SPRETEiJ_G0022149) Cacna1h (MGP_SPRETEiJ_G0022148) Tpsg1 (MGP_SPRETEiJ_G0022147) Tpsb2 (MGP_SPRETEiJ_G0022146) Tpsab1 (MGP_SPRETEiJ_G0022145) Prss29 (MGP_SPRETEiJ_G0022144) Prss28 (MGP_SPRETEiJ_G0022143) Prss34 (MGP_SPRETEiJ_G0022142) Ube2i (MGP_SPRETEiJ_G0022141) #22 Baiap3 (MGP_SPRETEiJ_G0022140) #23 Tsr3 (MGP_SPRETEiJ_G0022139) Gnptg (MGP_SPRETEiJ_G0022138) MGP_SPRETEiJ_G0022137 #27 Unkl (MGP_SPRETEiJ_G0022136) #27 Uqcc4 (MGP_SPRETEiJ_G0022135) Ccdc154 (MGP_SPRETEiJ_G0022134) Clcn7 (MGP_SPRETEiJ_G0022133) Ptx4 (MGP_SPRETEiJ_G0022132) Telo2 (MGP_SPRETEiJ_G0022131) Tmem204 (MGP_SPRETEiJ_G0022130) Ift140 (MGP_SPRETEiJ_G0022129) Cramp1 (MGP_SPRETEiJ_G0022128) Jpt2 (MGP_SPRETEiJ_G0022127) Nme3 (MGP_SPRETEiJ_G0022126) Steppe mouse MODERN SPECIES 3397 ENSMSIG00000029551 Fzd6 (ENSMSIG00000029558) ENSMSIG00000029566 Baalc (ENSMSIG00000029568) Atp6v1c1 (ENSMSIG00000029574) ENSMSIG00000029580 #22 Azin1 (ENSMSIG00000029587) Klf10 (ENSMSIG00000029596) Odf1 (ENSMSIG00000029624) Ubr5 (ENSMSIG00000029630) Rrm2b (ENSMSIG00000029663) ENSMSIG00000029677 Cricetidae ANCESTRAL SPECIES ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207.j ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Cricetinae ANCESTRAL SPECIES ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207.j ENSGT00940000163159.b.b ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 153 Ccdc192 (ENSCGRG00001017920) Slc12a2 (ENSCGRG00001019992) ENSCGRG00001024319 Fbn2 (ENSCGRG00001020407) Slc27a6 (ENSCGRG00001021010) Isoc1 (ENSCGRG00001012959) Adamts19 (ENSCGRG00001006886) Minar2 (ENSCGRG00001019772) ENSCGRG00001011405 Chsy3 (ENSCGRG00001009384) ENSCGRG00001007108 ENSCGRG00001022150 ENSCGRG00001003754 ENSCGRG00001002378 Smim3 (ENSCGRG00001001317) ENSCGRG00001016490 #22 Dctn4 (ENSCGRG00001000529) Rbm22 (ENSCGRG00001015110) Myoz3 (ENSCGRG00001012865) Synpo (ENSCGRG00001015166) Ndst1 (ENSCGRG00001024486) ENSCGRG00001007906 RPS14 (ENSCGRG00001019064) Cd74 (ENSCGRG00001022698) Tcof1 (ENSCGRG00001009700) Arsi (ENSCGRG00001004125) ENSCGRG00001022640 Slc6a7 (ENSCGRG00001006717) Cdx1 (ENSCGRG00001016843) Pdgfrb (ENSCGRG00001022643) Csf1r (ENSCGRG00001013504) Chinese hamster chok1gshd MODERN SPECIES 2 Ism2 (ENSCGRG00001024528) SPTLC2 (ENSCGRG00001012086) Alkbh1 (ENSCGRG00001009815) Slirp (ENSCGRG00001024068) Snw1 (ENSCGRG00001022083) Adck1 (ENSCGRG00001021276) ENSCGRG00001017307 ENSCGRG00001024536 ENSCGRG00001021653 ENSCGRG00001020781 Cep128 (ENSCGRG00001023432) Tshr (ENSCGRG00001021416) Gtf2a1 (ENSCGRG00001021040) Ston2 (ENSCGRG00001021061) Sel1l (ENSCGRG00001023783) ENSCGRG00001020011 #22 ENSCGRG00001012817 ENSCGRG00001009867 ENSCGRG00001008260 ENSCGRG00001010251 Flrt2 (ENSCGRG00001009761) ENSCGRG00001009518 Galc (ENSCGRG00001014363) Gpr65 (ENSCGRG00001008849) Kcnk10 (ENSCGRG00001012025) Spata7 (ENSCGRG00001018756) Ptpn21 (ENSCGRG00001015364) Zc3h14 (ENSCGRG00001015677) Eml5 (ENSCGRG00001019978) Ttc8 (ENSCGRG00001019813) Foxn3 (ENSCGRG00001020264) Chinese hamster chok1gshd MODERN SPECIES 229 ENSCGRG00001013068 Mslnl (ENSCGRG00001000512) Rpusd1 (ENSCGRG00001014253) Gng13 (ENSCGRG00001012064) Chtf18 (ENSCGRG00001023680) Lmf1 (ENSCGRG00001016063) Sox8 (ENSCGRG00001014870) Sstr5 (ENSCGRG00001004059) Tekt4 (ENSCGRG00001022790) Cacna1h (ENSCGRG00001019517) Tpsg1 (ENSCGRG00001011942) Tpsb2 (ENSCGRG00001005899) Prss29 (ENSCGRG00001007493) Prss28 (ENSCGRG00001017156) Prss34 (ENSCGRG00001017246) ENSCGRG00001021777 #22 Baiap3 (ENSCGRG00001011930) #23 Tsr3 (ENSCGRG00001021799) Gnptg (ENSCGRG00001018591) Unkl (ENSCGRG00001014153) #27 Uqcc4 (ENSCGRG00001011218) ENSCGRG00001008639 Ccdc154 (ENSCGRG00001021301) Clcn7 (ENSCGRG00001022791) Ptx4 (ENSCGRG00001018707) Telo2 (ENSCGRG00001024725) Tmem204 (ENSCGRG00001023413) Ift140 (ENSCGRG00001020155) Cramp1 (ENSCGRG00001024738) Jpt2 (ENSCGRG00001023398) Mapk8ip3 (ENSCGRG00001009625) Golden Hamster MODERN SPECIES 733 Ccdc78 (ENSMAUG00000018218) Haghl (ENSMAUG00000008661) Ciao3 (ENSMAUG00000018392) Mslnl (ENSMAUG00000013054) Rpusd1 (ENSMAUG00000019998) ENSMAUG00000010503 Gng13 (ENSMAUG00000010339) ENSMAUG00000012874 Sox8 (ENSMAUG00000013294) Sstr5 (ENSMAUG00000007403) Tekt4 (ENSMAUG00000008990) ENSMAUG00000017437 Tpsg1 (ENSMAUG00000013328) Prss29 (ENSMAUG00000012631) Prss34 (ENSMAUG00000007393) Ube2i (ENSMAUG00000019217) #22 Baiap3 (ENSMAUG00000009623) #23 Tsr3 (ENSMAUG00000019859) Gnptg (ENSMAUG00000011816) Unkl (ENSMAUG00000016281) #27 Uqcc4 (ENSMAUG00000002041) Ccdc154 (ENSMAUG00000021304) Clcn7 (ENSMAUG00000021954) Ptx4 (ENSMAUG00000017221) ENSMAUG00000022008 Tmem204 (ENSMAUG00000008010) ENSMAUG00000022190 Cramp1 (ENSMAUG00000019364) Jpt2 (ENSMAUG00000005592) ENSMAUG00000007417 Mapk8ip3 (ENSMAUG00000010859) Cricetidae_B ANCESTRAL SPECIES ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207.j ENSGT00940000163159.b.b ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Prairie vole DUPLICATION Prairie vole MODERN SPECIES 15 Ciao3 (ENSMOCG00000017188) ENSMOCG00000010464 Msln (ENSMOCG00000020854) Mslnl (ENSMOCG00000017856) Rpusd1 (ENSMOCG00000014082) Chtf18 (ENSMOCG00000007089) Gng13 (ENSMOCG00000014436) Lmf1 (ENSMOCG00000022377) Sox8 (ENSMOCG00000016165) Sstr5 (ENSMOCG00000009060) Tekt4 (ENSMOCG00000021268) Cacna1h (ENSMOCG00000018501) Tpsg1 (ENSMOCG00000005651) Prss29 (ENSMOCG00000013632) Prss34 (ENSMOCG00000014541) ENSMOCG00000003971 #22 Baiap3 (ENSMOCG00000013309) #23 Tsr3 (ENSMOCG00000020216) Gnptg (ENSMOCG00000003323) Unkl (ENSMOCG00000011424) #27 Uqcc4 (ENSMOCG00000014311) Ccdc154 (ENSMOCG00000008134) Clcn7 (ENSMOCG00000012551) Ptx4 (ENSMOCG00000016016) Telo2 (ENSMOCG00000022271) ENSMOCG00000014894 Tmem204 (ENSMOCG00000010004) ENSMOCG00000011625 Cramp1 (ENSMOCG00000015569) Jpt2 (ENSMOCG00000022903) Mapk8ip3 (ENSMOCG00000018334) Prairie vole MODERN SPECIES 351 Or6b1 (ENSMOCG00000001670) Or2f2 (ENSMOCG00000002485) Or2f1b (ENSMOCG00000001730) Or2f1 (ENSMOCG00000002660) Tcaf1 (ENSMOCG00000002979) Tcaf2 (ENSMOCG00000013031) Tcaf3 (ENSMOCG00000004877) Tas2r126 (ENSMOCG00000022561) Tas2r143 (ENSMOCG00000004249) Epha1 (ENSMOCG00000017615) ENSMOCG00000012709 Fam131b (ENSMOCG00000016863) Clcn1 (ENSMOCG00000003747) Casp2 (ENSMOCG00000018354) Tmem139 (ENSMOCG00000020642) ENSMOCG00000002841 #22 ENSMOCG00000002201 Pip (ENSMOCG00000005223) Kel (ENSMOCG00000007596) Llcfc1 (ENSMOCG00000010984) Trpv5 (ENSMOCG00000007194) Trpv6 (ENSMOCG00000004978) Ephb6 (ENSMOCG00000020818) ENSMOCG00000017083 ENSMOCG00000006276 ENSMOCG00000003833 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 21 Ciao3 (ENSPEMG00000017678) Msln (ENSPEMG00000013748) Mslnl (ENSPEMG00000003076) Rpusd1 (ENSPEMG00000000497) Chtf18 (ENSPEMG00000010821) Gng13 (ENSPEMG00000002801) Lmf1 (ENSPEMG00000019205) Sox8 (ENSPEMG00000028510) Sstr5 (ENSPEMG00000003514) Tekt4 (ENSPEMG00000015572) Cacna1h (ENSPEMG00000012136) Tpsg1 (ENSPEMG00000007929) ENSPEMG00000030592 Prss29 (ENSPEMG00000014382) Prss34 (ENSPEMG00000015146) Ube2i (ENSPEMG00000009076) #22 Baiap3 (ENSPEMG00000017470) #23 Tsr3 (ENSPEMG00000005763) ENSPEMG00000031212 ENSPEMG00000028821 Unkl (ENSPEMG00000008937) #27 Uqcc4 (ENSPEMG00000025335) Percc1 (ENSPEMG00000028044) Ccdc154 (ENSPEMG00000006684) Clcn7 (ENSPEMG00000016398) Ptx4 (ENSPEMG00000012407) Telo2 (ENSPEMG00000017007) Ift140 (ENSPEMG00000014706) Tmem204 (ENSPEMG00000027984) Cramp1 (ENSPEMG00000007023) Jpt2 (ENSPEMG00000017546) Northern American deer mouse MODERN SPECIES 5 Setd3 (ENSPEMG00000017371) Ccnk (ENSPEMG00000017006) Ccdc85c (ENSPEMG00000011777) Hhipl1 (ENSPEMG00000000908) Cyp46a1 (ENSPEMG00000013265) Eml1 (ENSPEMG00000014716) Evl (ENSPEMG00000002255) Degs2 (ENSPEMG00000000103) ENSPEMG00000029084 Yy1 (ENSPEMG00000027618) Slc25a29 (ENSPEMG00000015407) Slc25a47 (ENSPEMG00000013819) Wars1 (ENSPEMG00000009239) Wdr25 (ENSPEMG00000001827) Begain (ENSPEMG00000014247) ENSPEMG00000014708 #22 ENSPEMG00000017089 ENSPEMG00000029257 ENSPEMG00000027756 Ppp2r5c (ENSPEMG00000021897) Dync1h1 (ENSPEMG00000021903) ENSPEMG00000030636 1700001K19Rik (ENSPEMG00000022271) ENSPEMG00000030091 ENSPEMG00000027442 ENSPEMG00000021846 ENSPEMG00000021942 Mok (ENSPEMG00000022583) Zfp839 (ENSPEMG00000024097) Cinp (ENSPEMG00000022134) Tecpr2 (ENSPEMG00000021467) Laurasiatheria ANCESTRAL SPECIES 10 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000163159.b.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Laurasiatheria_a ANCESTRAL SPECIES 12 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000163159.b.a ENSGT00940000158868.h ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Laurasiatheria_b ANCESTRAL SPECIES 12 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000163159.b.a ENSGT00940000158868.h ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Laurasiatheria_c ANCESTRAL SPECIES 12 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000158868.h ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Chiroptera ANCESTRAL SPECIES 12 ENSGT00390000013678 ENSGT00940000161924 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00940000156666.g ENSGT00940000158868.h ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Microchiroptera ANCESTRAL SPECIES 17 ENSGT00390000013678 ENSGT00940000161924 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00940000156666.g ENSGT00940000158868.h ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Microbat MODERN SPECIES 1902 UBE2I (ENSMLUG00000008229) #22 BAIAP3 (ENSMLUG00000008172) #23 TSR3 (ENSMLUG00000008158) GNPTG (ENSMLUG00000011253) UNKL (ENSMLUG00000011207) #27 UQCC4 (ENSMLUG00000001629) Greater horseshoe bat MODERN SPECIES 47 MSLNL (ENSRFEG00010017625) RPUSD1 (ENSRFEG00010017814) CHTF18 (ENSRFEG00010017907) ENSRFEG00010018316 LMF1 (ENSRFEG00010018340) SOX8 (ENSRFEG00010018387) SSTR5 (ENSRFEG00010018412) C1QTNF8 (ENSRFEG00010018429) TEKT4 (ENSRFEG00010018476) CACNA1H (ENSRFEG00010018539) ENSRFEG00010018612 ENSRFEG00010018680 ENSRFEG00010019023 ENSRFEG00010019082 ENSRFEG00010019105 UBE2I (ENSRFEG00010019169) #22 BAIAP3 (ENSRFEG00010019213) #23 TSR3 (ENSRFEG00010019277) GNPTG (ENSRFEG00010019317) UNKL (ENSRFEG00010019360) #27 UQCC4 (ENSRFEG00010019421) CCDC154 (ENSRFEG00010019563) CLCN7 (ENSRFEG00010019806) PTX4 (ENSRFEG00010019992) TELO2 (ENSRFEG00010020015) IFT140 (ENSRFEG00010020088) TMEM204 (ENSRFEG00010020163) CRAMP1 (ENSRFEG00010020192) JPT2 (ENSRFEG00010020239) MAPK8IP3 (ENSRFEG00010020345) MRPS34 (ENSRFEG00010020489) Megabat MODERN SPECIES 3304 UBE2I (ENSPVAG00000010807) #22 Equus ANCESTRAL SPECIES 32 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000163349 ENSGT00940000162207 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Horse MODERN SPECIES 4 CIAO3 (ENSECAG00000001414) ENSECAG00000001261 MSLNL (ENSECAG00000023386) RPUSD1 (ENSECAG00000039586) CHTF18 (ENSECAG00000018699) GNG13 (ENSECAG00000018282) LMF1 (ENSECAG00000017222) SOX8 (ENSECAG00000016320) SSTR5 (ENSECAG00000005022) C1QTNF8 (ENSECAG00000030694) TEKT4 (ENSECAG00000014654) ENSECAG00000028918 CACNA1H (ENSECAG00000022241) TPSG1 (ENSECAG00000021470) ENSECAG00000017238 UBE2I (ENSECAG00000015831) #22 BAIAP3 (ENSECAG00000014225) #23 TSR3 (ENSECAG00000013501) GNPTG (ENSECAG00000011390) UNKL (ENSECAG00000010641) #27 ENSECAG00000054454 PERCC1 (ENSECAG00000043201) CCDC154 (ENSECAG00000009445) CLCN7 (ENSECAG00000023236) PTX4 (ENSECAG00000023063) TELO2 (ENSECAG00000017413) TMEM204 (ENSECAG00000015576) IFT140 (ENSECAG00000009031) CRAMP1 (ENSECAG00000023299) JPT2 (ENSECAG00000026941) MAPK8IP3 (ENSECAG00000016379) Donkey MODERN SPECIES 5 ENSEASG00005018408 MSLNL (ENSEASG00005018415) RPUSD1 (ENSEASG00005033614) CHTF18 (ENSEASG00005018443) GNG13 (ENSEASG00005034189) LMF1 (ENSEASG00005018492) SOX8 (ENSEASG00005018499) SSTR5 (ENSEASG00005033152) C1QTNF8 (ENSEASG00005018503) ENSEASG00005018505 ENSEASG00005038132 ENSEASG00005030738 CACNA1H (ENSEASG00005018512) TPSG1 (ENSEASG00005035742) ENSEASG00005000111 UBE2I (ENSEASG00005000142) #22 ENSEASG00005000233 #23 TSR3 (ENSEASG00005000250) ENSEASG00005000258 UNKL (ENSEASG00005000274) #27 ENSEASG00005034982 PERCC1 (ENSEASG00005027506) CCDC154 (ENSEASG00005000415) CLCN7 (ENSEASG00005000520) PTX4 (ENSEASG00005036837) TELO2 (ENSEASG00005000596) IFT140 (ENSEASG00005001221) TMEM204 (ENSEASG00005001516) CRAMP1 (ENSEASG00005001568) JPT2 (ENSEASG00005025904) ENSEASG00005038396 Carnivora ANCESTRAL SPECIES 12 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000163159.b.a ENSGT00940000158868.h ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Felidae ANCESTRAL SPECIES 25 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000163159.a.b ENSGT00940000163159.b.a ENSGT00940000158868.h ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822.m #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Panthera ANCESTRAL SPECIES 29 ENSGT00940000163159.a.b ENSGT00940000163159.b.a ENSGT00940000158868.h ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822.m #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Tiger MODERN SPECIES 590 ENSPTIG00000021566 ENSPTIG00000021646 UBE2I (ENSPTIG00000021666) #22 TSR3 (ENSPTIG00000000359) UNKL (ENSPTIG00000000863) #27 CLCN7 (ENSPTIG00000005037) PTX4 (ENSPTIG00000005448) TELO2 (ENSPTIG00000005753) IFT140 (ENSPTIG00000005835) TMEM204 (ENSPTIG00000006591) JPT2 (ENSPTIG00000007704) MAPK8IP3 (ENSPTIG00000007779) EME2 (ENSPTIG00000008505) NUBP2 (ENSPTIG00000008814) HAGH (ENSPTIG00000008853) FAHD1 (ENSPTIG00000009011) ENSPTIG00000009036 HS3ST6 (ENSPTIG00000009671) Panthera_a ANCESTRAL SPECIES 31 ENSGT00940000163159.a.b ENSGT00940000163159.b.a ENSGT00940000158868.h ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822.m #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a lion MODERN SPECIES 16 ENSPLOG00000014312 ENSPLOG00000014402 ENSPLOG00000014879 ENSPLOG00000015498 UBE2I (ENSPLOG00000016088) #22 BAIAP3 (ENSPLOG00000016379) #23 TSR3 (ENSPLOG00000018457) GNPTG (ENSPLOG00000018526) ENSPLOG00000018640 #27 ENSPLOG00000018710 #27 UQCC4 (ENSPLOG00000011247) PERCC1 (ENSPLOG00000011277) CCDC154 (ENSPLOG00000011307) CLCN7 (ENSPLOG00000011352) PTX4 (ENSPLOG00000011504) TELO2 (ENSPLOG00000011575) IFT140 (ENSPLOG00000011769) TMEM204 (ENSPLOG00000011810) CRAMP1 (ENSPLOG00000011890) JPT2 (ENSPLOG00000012622) leopard MODERN SPECIES 53 ENSPPRG00000013046 ENSPPRG00000012866 UBE2I (ENSPPRG00000012596) #22 BAIAP3 (ENSPPRG00000010898) #23 TSR3 (ENSPPRG00000023265) ENSPPRG00000022569 GNPTG (ENSPPRG00000022265) UNKL (ENSPPRG00000018472) #27 UQCC4 (ENSPPRG00000013700) PERCC1 (ENSPPRG00000013524) CCDC154 (ENSPPRG00000013178) CLCN7 (ENSPPRG00000012073) PTX4 (ENSPPRG00000009473) TELO2 (ENSPPRG00000006967) IFT140 (ENSPPRG00000005374) TMEM204 (ENSPPRG00000004432) CRAMP1 (ENSPPRG00000003952) JPT2 (ENSPPRG00000001951) Cat MODERN SPECIES 247 RPUSD1 (ENSFCAG00000010359) CHTF18 (ENSFCAG00000010360) GNG13 (ENSFCAG00000010361) ENSFCAG00000053676 LMF1 (ENSFCAG00000010362) SOX8 (ENSFCAG00000004219) SSTR5 (ENSFCAG00000004225) C1QTNF8 (ENSFCAG00000036814) TEKT4 (ENSFCAG00000023213) ENSFCAG00000039363 ENSFCAG00000053055 CACNA1H (ENSFCAG00000018843) ENSFCAG00000004650 ENSFCAG00000047634 ENSFCAG00000050454 UBE2I (ENSFCAG00000027291) #22 TSR3 (ENSFCAG00000029607) GNPTG (ENSFCAG00000010641) ENSFCAG00000049219 UNKL (ENSFCAG00000010643) #27 UQCC4 (ENSFCAG00000040994) PERCC1 (ENSFCAG00000043313) CCDC154 (ENSFCAG00000010649) CLCN7 (ENSFCAG00000010650) PTX4 (ENSFCAG00000043223) TELO2 (ENSFCAG00000010652) TMEM204 (ENSFCAG00000033771) IFT140 (ENSFCAG00000010653) CRAMP1 (ENSFCAG00000011852) JPT2 (ENSFCAG00000034589) MAPK8IP3 (ENSFCAG00000011724) Caniformia ANCESTRAL SPECIES 8 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000155138.f ENSGT00940000158868.h ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Canidae DUPLICATION Canidae DUPLICATION Canidae ANCESTRAL SPECIES 3 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000155138.f ENSGT00940000158868.h ENSGT00550000075088.a.a.db.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Red fox MODERN SPECIES 200 HAGHL (ENSVVUG00000012413) CIAO3 (ENSVVUG00000012398) ENSVVUG00000012378 RPUSD1 (ENSVVUG00000012357) CHTF18 (ENSVVUG00000011453) ENSVVUG00000011412 LMF1 (ENSVVUG00000011398) SOX8 (ENSVVUG00000011383) ENSVVUG00000011376 TEKT4 (ENSVVUG00000011371) ENSVVUG00000011368 CACNA1H (ENSVVUG00000011333) ENSVVUG00000011326 ENSVVUG00000011324 ENSVVUG00000011321 ENSVVUG00000011291 #22 BAIAP3 (ENSVVUG00000011214) #23 GNPTG (ENSVVUG00000011194) UNKL (ENSVVUG00000011182) #27 TSR3 (ENSVVUG00000011174) CCDC154 (ENSVVUG00000011157) CLCN7 (ENSVVUG00000011067) PTX4 (ENSVVUG00000011033) TELO2 (ENSVVUG00000011008) TMEM204 (ENSVVUG00000010997) IFT140 (ENSVVUG00000010908) JPT2 (ENSVVUG00000010820) MAPK8IP3 (ENSVVUG00000010026) MRPS34 (ENSVVUG00000010000) SPSB3 (ENSVVUG00000009994) NUBP2 (ENSVVUG00000009958) Canis_lupus ANCESTRAL SPECIES 2 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000158868.h ENSGT00390000016475.o ENSGT00550000075088.a.a.db.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Dingo MODERN SPECIES 172 CIAO3 (ENSCAFG00020008936) ENSCAFG00020008907 MSLNL (ENSCAFG00020008896) RPUSD1 (ENSCAFG00020008891) CHTF18 (ENSCAFG00020008707) GNG13 (ENSCAFG00020008692) LMF1 (ENSCAFG00020008632) SOX8 (ENSCAFG00020008591) SSTR5 (ENSCAFG00020008586) TEKT4 (ENSCAFG00020008580) ENSCAFG00020008579 CACNA1H (ENSCAFG00020002134) ENSCAFG00020001442 ENSCAFG00020001432 ENSCAFG00020001407 ENSCAFG00020001370 #22 BAIAP3 (ENSCAFG00020001352) #23 TSR3 (ENSCAFG00020001344) GNPTG (ENSCAFG00020001337) UNKL (ENSCAFG00020001284) #27 UQCC4 (ENSCAFG00020001278) CCDC154 (ENSCAFG00020001227) CLCN7 (ENSCAFG00020001216) PTX4 (ENSCAFG00020001191) TELO2 (ENSCAFG00020001179) TMEM204 (ENSCAFG00020001166) IFT140 (ENSCAFG00020001129) CRAMP1 (ENSCAFG00020000788) JPT2 (ENSCAFG00020000738) MAPK8IP3 (ENSCAFG00020000709) MRPS34 (ENSCAFG00020000675) Canidae ANCESTRAL SPECIES ENSGT00550000075088.a.a.db.b #22 Canis_lupus ANCESTRAL SPECIES ENSGT00550000075088.a.a.db.b #22 Dingo MODERN SPECIES 327 STXBP1 (ENSCAFG00020015768) ENSCAFG00020015766 NIBAN2 (ENSCAFG00020015765) LRSAM1 (ENSCAFG00020015761) ENSCAFG00020015751 ZNF79 (ENSCAFG00020015748) SLC2A8 (ENSCAFG00020015735) GARNL3 (ENSCAFG00020015720) ANGPTL2 (ENSCAFG00020015712) RALGPS1 (ENSCAFG00020015705) ZBTB34 (ENSCAFG00020015695) ZBTB43 (ENSCAFG00020015693) LMX1B (ENSCAFG00020015686) MVB12B (ENSCAFG00020015680) PBX3 (ENSCAFG00020015673) ENSCAFG00020015672 #22 MAPKAP1 (ENSCAFG00020015668) GAPVD1 (ENSCAFG00020015663) ENSCAFG00020015662 HSPA5 (ENSCAFG00020015658) RABEPK (ENSCAFG00020015656) ENSCAFG00020015654 PPP6C (ENSCAFG00020015642) SCAI (ENSCAFG00020015613) GOLGA1 (ENSCAFG00020015604) ARPC5L (ENSCAFG00020015602) ENSCAFG00020015596 WDR38 (ENSCAFG00020015590) OLFML2A (ENSCAFG00020015588) NR6A1 (ENSCAFG00020015583) NR5A1 (ENSCAFG00020015577) Red fox MODERN SPECIES 77 FAM129B (ENSVVUG00000012307) LRSAM1 (ENSVVUG00000011551) ENSVVUG00000011511 ZNF79 (ENSVVUG00000011508) SLC2A8 (ENSVVUG00000011243) GARNL3 (ENSVVUG00000010701) ANGPTL2 (ENSVVUG00000010654) RALGPS1 (ENSVVUG00000010288) ZBTB34 (ENSVVUG00000010253) ZBTB43 (ENSVVUG00000010246) LMX1B (ENSVVUG00000010228) MVB12B (ENSVVUG00000010180) ENSVVUG00000010154 ENSVVUG00000010148 ENSVVUG00000010144 ENSVVUG00000010140 #22 MAPKAP1 (ENSVVUG00000010108) GAPVD1 (ENSVVUG00000010075) ENSVVUG00000010071 HSPA5 (ENSVVUG00000010069) RABEPK (ENSVVUG00000010062) ENSVVUG00000010058 PPP6C (ENSVVUG00000010053) SCAI (ENSVVUG00000009995) GOLGA1 (ENSVVUG00000009974) ARPC5L (ENSVVUG00000009965) RPL35 (ENSVVUG00000009948) WDR38 (ENSVVUG00000009939) OLFML2A (ENSVVUG00000009902) NR6A1 (ENSVVUG00000009870) NR5A1 (ENSVVUG00000009804) Canidae ANCESTRAL SPECIES ENSGT00550000075088.a.a.eb #22 Red fox MODERN SPECIES 11 SLF1 (ENSVVUG00000022098) ENSVVUG00000022095 MCTP1 (ENSVVUG00000022085) FAM81B (ENSVVUG00000022075) ENSVVUG00000022073 ENSVVUG00000022071 TTC37 (ENSVVUG00000021839) ARSK (ENSVVUG00000021835) ENSVVUG00000021834 SPATA9 (ENSVVUG00000021832) ENSVVUG00000021831 ENSVVUG00000021830 ENSVVUG00000021825 GLRX (ENSVVUG00000021824) ELL2 (ENSVVUG00000021814) ENSVVUG00000021812 #22 PCSK1 (ENSVVUG00000021762) CAST (ENSVVUG00000021741) ERAP1 (ENSVVUG00000020256) ERAP2 (ENSVVUG00000020208) LNPEP (ENSVVUG00000020196) LIX1 (ENSVVUG00000020181) RIOK2 (ENSVVUG00000020170) ENSVVUG00000020151 RGMB (ENSVVUG00000020140) CHD1 (ENSVVUG00000020132) ENSVVUG00000020121 ENSVVUG00000020117 FAM174A (ENSVVUG00000020104) ST8SIA4 (ENSVVUG00000020099) SLCO4C1 (ENSVVUG00000020047) Caniformia_b ANCESTRAL SPECIES 7 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000155138.f ENSGT00940000158868.h ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Mustelinae ANCESTRAL SPECIES 15 ENSGT00390000013678 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000156666 ENSGT00940000162207 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 American mink MODERN SPECIES 111 CCDC78 (ENSNVIG00000016041) CIAO3 (ENSNVIG00000016075) ENSNVIG00000016150 MSLNL (ENSNVIG00000016168) RPUSD1 (ENSNVIG00000016185) CHTF18 (ENSNVIG00000016217) GNG13 (ENSNVIG00000016274) LMF1 (ENSNVIG00000016288) SOX8 (ENSNVIG00000016342) SSTR5 (ENSNVIG00000016374) TEKT4 (ENSNVIG00000016420) ENSNVIG00000016480 CACNA1H (ENSNVIG00000016544) ENSNVIG00000018349 ENSNVIG00000018382 UBE2I (ENSNVIG00000018606) #22 BAIAP3 (ENSNVIG00000018645) #23 TSR3 (ENSNVIG00000018868) GNPTG (ENSNVIG00000018874) UNKL (ENSNVIG00000018903) #27 UQCC4 (ENSNVIG00000018965) CCDC154 (ENSNVIG00000018991) CLCN7 (ENSNVIG00000019024) PTX4 (ENSNVIG00000019142) TELO2 (ENSNVIG00000019150) IFT140 (ENSNVIG00000019190) TM204 (ENSNVIG00000019228) CRAMP1 (ENSNVIG00000019268) JPT2 (ENSNVIG00000019338) MAPK8IP3 (ENSNVIG00000019434) ENSNVIG00000021975 Ferret MODERN SPECIES 189 CIAO3 (ENSMPUG00000015903) ENSMPUG00000015901 MSLNL (ENSMPUG00000015899) RPUSD1 (ENSMPUG00000015897) CHTF18 (ENSMPUG00000015895) ENSMPUG00000020064 LMF1 (ENSMPUG00000015894) SOX8 (ENSMPUG00000015893) SSTR5 (ENSMPUG00000020063) ENSMPUG00000015892 TEKT4 (ENSMPUG00000015890) CACNA1H (ENSMPUG00000015790) ENSMPUG00000015767 ENSMPUG00000015766 ENSMPUG00000015765 UBE2I (ENSMPUG00000015763) #22 BAIAP3 (ENSMPUG00000015667) #23 TSR3 (ENSMPUG00000015659) GNPTG (ENSMPUG00000015655) UNKL (ENSMPUG00000015653) #27 UQCC4 (ENSMPUG00000015644) CCDC154 (ENSMPUG00000015637) CLCN7 (ENSMPUG00000015633) TELO2 (ENSMPUG00000015631) TMEM204 (ENSMPUG00000015628) IFT140 (ENSMPUG00000015620) ENSMPUG00000020062 CRAMP1 (ENSMPUG00000015618) MAPK8IP3 (ENSMPUG00000015614) MRPS34 (ENSMPUG00000015607) EME2 (ENSMPUG00000015605) Ursidae ANCESTRAL SPECIES 3 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000155138.f ENSGT00940000158868.h ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Giant Panda MODERN SPECIES 1 CIAO3 (ENSAMEG00000007414) ENSAMEG00000007440 MSLNL (ENSAMEG00000007449) RPUSD1 (ENSAMEG00000029408) GNG13 (ENSAMEG00000007489) CHTF18 (ENSAMEG00000007469) ENSAMEG00000007491 SOX8 (ENSAMEG00000007508) SSTR5 (ENSAMEG00000026108) C1QTNF8 (ENSAMEG00000007521) ENSAMEG00000007524 CACNA1H (ENSAMEG00000007549) ENSAMEG00000007659 ENSAMEG00000031028 ENSAMEG00000007708 UBE2I (ENSAMEG00000007721) #22 BAIAP3 (ENSAMEG00000007748) #23 ENSAMEG00000007859 ENSAMEG00000030878 ENSAMEG00000007981 CCDC154 (ENSAMEG00000007986) CLCN7 (ENSAMEG00000007997) TELO2 (ENSAMEG00000008092) ENSAMEG00000008206 IFT140 (ENSAMEG00000008128) CRAMP1 (ENSAMEG00000008213) JPT2 (ENSAMEG00000008232) MAPK8IP3 (ENSAMEG00000008238) ENSAMEG00000024318 MRPS34 (ENSAMEG00000031331) EME2 (ENSAMEG00000008393) Ursus ANCESTRAL SPECIES 9 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000156666 ENSGT00940000162207 ENSGT01100000263714 ENSGT00940000158868.h ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 ENSGT00390000008964 American black bear DUPLICATION American black bear MODERN SPECIES 20 ENSUAMG00000012734 RPUSD1 (ENSUAMG00000012736) CHTF18 (ENSUAMG00000012737) GNG13 (ENSUAMG00000012751) ENSUAMG00000012758 ENSUAMG00000012762 SOX8 (ENSUAMG00000012767) ENSUAMG00000012773 C1QTNF8 (ENSUAMG00000012775) TEKT4 (ENSUAMG00000012778) ENSUAMG00000012781 CACNA1H (ENSUAMG00000012808) ENSUAMG00000012985 ENSUAMG00000013116 ENSUAMG00000013123 ENSUAMG00000013236 #22 UBE2I (ENSUAMG00000013240) #22 TSR3 (ENSUAMG00000013272) GNPTG (ENSUAMG00000013274) ENSUAMG00000013279 #27 UQCC4 (ENSUAMG00000013285) CCDC154 (ENSUAMG00000013288) CLCN7 (ENSUAMG00000013295) PTX4 (ENSUAMG00000013300) TELO2 (ENSUAMG00000013302) IFT140 (ENSUAMG00000013306) TMEM204 (ENSUAMG00000013309) CRAMP1 (ENSUAMG00000013313) JPT2 (ENSUAMG00000013315) MAPK8IP3 (ENSUAMG00000013316) NME3 (ENSUAMG00000013321) American black bear MODERN SPECIES 20 RPUSD1 (ENSUAMG00000012736) CHTF18 (ENSUAMG00000012737) GNG13 (ENSUAMG00000012751) ENSUAMG00000012758 ENSUAMG00000012762 SOX8 (ENSUAMG00000012767) ENSUAMG00000012773 C1QTNF8 (ENSUAMG00000012775) TEKT4 (ENSUAMG00000012778) ENSUAMG00000012781 CACNA1H (ENSUAMG00000012808) ENSUAMG00000012985 ENSUAMG00000013116 ENSUAMG00000013123 ENSUAMG00000013236 #22 UBE2I (ENSUAMG00000013240) #22 TSR3 (ENSUAMG00000013272) GNPTG (ENSUAMG00000013274) ENSUAMG00000013279 #27 UQCC4 (ENSUAMG00000013285) CCDC154 (ENSUAMG00000013288) CLCN7 (ENSUAMG00000013295) PTX4 (ENSUAMG00000013300) TELO2 (ENSUAMG00000013302) IFT140 (ENSUAMG00000013306) TMEM204 (ENSUAMG00000013309) CRAMP1 (ENSUAMG00000013313) JPT2 (ENSUAMG00000013315) MAPK8IP3 (ENSUAMG00000013316) NME3 (ENSUAMG00000013321) MRPS34 (ENSUAMG00000013323) Polar bear DUPLICATION Polar bear MODERN SPECIES 200 ENSUMAG00000021154 ENSUMAG00000021159 ENSUMAG00000021161 CIAO3 (ENSUMAG00000021165) ENSUMAG00000021169 RPUSD1 (ENSUMAG00000021174) ENSUMAG00000021177 GNG13 (ENSUMAG00000021183) LMF1 (ENSUMAG00000021188) ENSUMAG00000021190 C1QTNF8 (ENSUMAG00000021194) ENSUMAG00000021198 ENSUMAG00000021203 ENSUMAG00000021206 ENSUMAG00000021227 ENSUMAG00000021302 #22 ENSUMAG00000021305 #22 GNPTG (ENSUMAG00000021320) ENSUMAG00000021347 ENSUMAG00000021354 CLCN7 (ENSUMAG00000021373) PTX4 (ENSUMAG00000021453) TELO2 (ENSUMAG00000021492) IFT140 (ENSUMAG00000021605) TMEM204 (ENSUMAG00000021614) CRAMP1 (ENSUMAG00000021635) JPT2 (ENSUMAG00000021688) MAPK8IP3 (ENSUMAG00000021776) SPSB3 (ENSUMAG00000022049) NUBP2 (ENSUMAG00000022054) HAGH (ENSUMAG00000022061) Polar bear MODERN SPECIES 200 ENSUMAG00000021159 ENSUMAG00000021161 CIAO3 (ENSUMAG00000021165) ENSUMAG00000021169 RPUSD1 (ENSUMAG00000021174) ENSUMAG00000021177 GNG13 (ENSUMAG00000021183) LMF1 (ENSUMAG00000021188) ENSUMAG00000021190 C1QTNF8 (ENSUMAG00000021194) ENSUMAG00000021198 ENSUMAG00000021203 ENSUMAG00000021206 ENSUMAG00000021227 ENSUMAG00000021302 #22 ENSUMAG00000021305 #22 GNPTG (ENSUMAG00000021320) ENSUMAG00000021347 ENSUMAG00000021354 CLCN7 (ENSUMAG00000021373) PTX4 (ENSUMAG00000021453) TELO2 (ENSUMAG00000021492) IFT140 (ENSUMAG00000021605) TMEM204 (ENSUMAG00000021614) CRAMP1 (ENSUMAG00000021635) JPT2 (ENSUMAG00000021688) MAPK8IP3 (ENSUMAG00000021776) SPSB3 (ENSUMAG00000022049) NUBP2 (ENSUMAG00000022054) HAGH (ENSUMAG00000022061) FAHD1 (ENSUMAG00000022065) Artiodactyla ANCESTRAL SPECIES 10 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000158868.g.a ENSGT00940000158868.g.b ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Suina ANCESTRAL SPECIES 28 ENSGT00940000161924 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000158868.g.a ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A.eb ENSGT00390000015528 ENSGT00940000153417.A.db ENSGT00390000003337 ENSGT00390000007652 Chacoan peccary MODERN SPECIES 846 TEKT4 (ENSCWAG00000021518) CACNA1H (ENSCWAG00000021257) ENSCWAG00000021007 ENSCWAG00000020756 UBE2I (ENSCWAG00000020724) #22 BAIAP3 (ENSCWAG00000020450) #23 TSR3 (ENSCWAG00000020405) GNPTG (ENSCWAG00000020393) UNKL (ENSCWAG00000020343) #27 UQCC4 (ENSCWAG00000020328) PERCC1 (ENSCWAG00000020323) CCDC154 (ENSCWAG00000020291) CLCN7 (ENSCWAG00000020171) ENSCWAG00000020136 TELO2 (ENSCWAG00000020114) ENSCWAG00000020099 Pig MODERN SPECIES 11 CIAO3 (ENSSSCG00000008002) ENSSSCG00000008001 MSLNL (ENSSSCG00000023487) RPUSD1 (ENSSSCG00000008000) CHTF18 (ENSSSCG00000008010) GNG13 (ENSSSCG00000008011) LMF1 (ENSSSCG00000008009) SOX8 (ENSSSCG00000037970) SSTR5 (ENSSSCG00000033234) C1QTNF8 (ENSSSCG00000032400) TEKT4 (ENSSSCG00000032076) CACNA1H (ENSSSCG00000034266) ENSSSCG00000021222 ENSSSCG00000035337 ENSSSCG00000008032 ENSSSCG00000021560 #22 BAIAP3 (ENSSSCG00000008029) #23 TSR3 (ENSSSCG00000008030) ENSSSCG00000063096 GNPTG (ENSSSCG00000008031) UNKL (ENSSSCG00000022963) #27 UQCC4 (ENSSSCG00000038882) PERCC1 (ENSSSCG00000048138) CCDC154 (ENSSSCG00000028139) CLCN7 (ENSSSCG00000008024) PTX4 (ENSSSCG00000037262) TELO2 (ENSSSCG00000008022) TMEM204 (ENSSSCG00000008021) IFT140 (ENSSSCG00000008020) CRAMP1 (ENSSSCG00000008026) JPT2 (ENSSSCG00000008019) Artiodactyla_a ANCESTRAL SPECIES 10 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000158868.g.a ENSGT00940000158868.g.b ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Camelidae ANCESTRAL SPECIES 33 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000158868.g.a ENSGT00940000158868.g.b ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Arabian camel MODERN SPECIES 41 RPUSD1 (ENSCDRG00005013621) CHTF18 (ENSCDRG00005013693) GNG13 (ENSCDRG00005013753) LMF1 (ENSCDRG00005013796) SOX8 (ENSCDRG00005013879) SSTR5 (ENSCDRG00005013911) C1QTNF8 (ENSCDRG00005013937) TEKT4 (ENSCDRG00005013975) CACNA1H (ENSCDRG00005014051) ENSCDRG00005014209 ENSCDRG00005014416 ENSCDRG00005014560 ENSCDRG00005014672 ENSCDRG00005014740 ENSCDRG00005015591 UBE2I (ENSCDRG00005015631) #22 BAIAP3 (ENSCDRG00005008932) #23 TSR3 (ENSCDRG00005009515) GNPTG (ENSCDRG00005009569) UNKL (ENSCDRG00005009857) #27 UQCC4 (ENSCDRG00005009947) PERCC1 (ENSCDRG00005009982) CCDC154 (ENSCDRG00005010003) CLCN7 (ENSCDRG00005010187) PTX4 (ENSCDRG00005010607) TELO2 (ENSCDRG00005010691) IFT140 (ENSCDRG00005010873) TMEM204 (ENSCDRG00005011342) CRAMP1 (ENSCDRG00005011383) JPT2 (ENSCDRG00005011470) MAPK8IP3 (ENSCDRG00005011576) Alpaca MODERN SPECIES 4521 UBE2I (ENSVPAG00000012572) #22 Artiodactyla_b ANCESTRAL SPECIES 9 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000158868.g.a ENSGT00940000158868.g.b ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Cetacea ANCESTRAL SPECIES 3 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000164974 ENSGT00940000158868.g.b ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Blue whale MODERN SPECIES 6 CIAO3 (ENSBMSG00010018645) ENSBMSG00010018693 ENSBMSG00010018726 MSLNL (ENSBMSG00010018807) RPUSD1 (ENSBMSG00010018876) CHTF18 (ENSBMSG00010018934) GNG13 (ENSBMSG00010018999) LMF1 (ENSBMSG00010019034) SOX8 (ENSBMSG00010019089) SSTR5 (ENSBMSG00010019119) C1QTNF8 (ENSBMSG00010019134) TEKT4 (ENSBMSG00010019161) CACNA1H (ENSBMSG00010020514) ENSBMSG00010022153 ENSBMSG00010022163 UBE2I (ENSBMSG00010009619) #22 BAIAP3 (ENSBMSG00010009701) #23 TSR3 (ENSBMSG00010010039) GNPTG (ENSBMSG00010010050) UNKL (ENSBMSG00010010085) #27 UQCC4 (ENSBMSG00010010125) PERCC1 (ENSBMSG00010010139) CLCN7 (ENSBMSG00010010255) TELO2 (ENSBMSG00010010337) IFT140 (ENSBMSG00010010364) TMEM204 (ENSBMSG00010010376) CRAMP1 (ENSBMSG00010010410) JPT2 (ENSBMSG00010010484) ENSBMSG00010010504 NME3 (ENSBMSG00010010525) MRPS34 (ENSBMSG00010010537) Odontoceti ANCESTRAL SPECIES 3 ENSGT00940000153514.a.a ENSGT00940000154612.m.b ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000156666 ENSGT00940000164974 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Sperm whale MODERN SPECIES 493 UBE2I (ENSPCTG00005017719) #22 ENSPCTG00005017656 #23 Odontoceti_a ANCESTRAL SPECIES 3 ENSGT00940000153514.a.a ENSGT00940000154612.m.b ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000156666 ENSGT00940000164974 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Odontoceti_b ANCESTRAL SPECIES 3 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000164974 ENSGT00940000163009 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Monodontidae ANCESTRAL SPECIES 1 ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000164974 ENSGT00940000163009 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Narwhal MODERN SPECIES 299 ENSMMNG00015002301 ENSMMNG00015002345 RPUSD1 (ENSMMNG00015002406) CHTF18 (ENSMMNG00015002433) GNG13 (ENSMMNG00015002476) LMF1 (ENSMMNG00015002505) SOX8 (ENSMMNG00015002551) SSTR5 (ENSMMNG00015002568) C1QTNF8 (ENSMMNG00015002584) TEKT4 (ENSMMNG00015002606) ENSMMNG00015002626 CACNA1H (ENSMMNG00015002661) ENSMMNG00015002706 ENSMMNG00015002721 ENSMMNG00015002740 UBE2I (ENSMMNG00015002771) #22 BAIAP3 (ENSMMNG00015002823) #23 TSR3 (ENSMMNG00015002901) GNPTG (ENSMMNG00015002928) UNKL (ENSMMNG00015002979) #27 UQCC4 (ENSMMNG00015003011) PERCC1 (ENSMMNG00015003027) CCDC154 (ENSMMNG00015003052) CLCN7 (ENSMMNG00015003119) PTX4 (ENSMMNG00015003188) TELO2 (ENSMMNG00015003226) IFT140 (ENSMMNG00015003282) TMEM204 (ENSMMNG00015003375) CRAMP1 (ENSMMNG00015003411) JPT2 (ENSMMNG00015003456) ENSMMNG00015003486 Beluga whale MODERN SPECIES 48 ENSDLEG00000005567 ENSDLEG00000005629 RPUSD1 (ENSDLEG00000005649) CHTF18 (ENSDLEG00000005661) GNG13 (ENSDLEG00000005682) LMF1 (ENSDLEG00000005694) SOX8 (ENSDLEG00000005708) SSTR5 (ENSDLEG00000005712) C1QTNF8 (ENSDLEG00000005720) TEKT4 (ENSDLEG00000005732) ENSDLEG00000005754 CACNA1H (ENSDLEG00000005946) ENSDLEG00000007050 ENSDLEG00000007061 ENSDLEG00000007070 UBE2I (ENSDLEG00000007079) #22 BAIAP3 (ENSDLEG00000007093) #23 TSR3 (ENSDLEG00000007161) GNPTG (ENSDLEG00000007174) UNKL (ENSDLEG00000007219) #27 CUNH16orf91 (ENSDLEG00000007246) PERCC1 (ENSDLEG00000007267) CLCN7 (ENSDLEG00000007278) PTX4 (ENSDLEG00000007294) TELO2 (ENSDLEG00000007302) IFT140 (ENSDLEG00000007323) TMEM204 (ENSDLEG00000007342) CRAMP1 (ENSDLEG00000007347) JPT2 (ENSDLEG00000007393) MAPK8IP3 (ENSDLEG00000007432) NME3 (ENSDLEG00000007506) Vaquita MODERN SPECIES 6 ENSPSNG00000009966 ENSPSNG00000010139 RPUSD1 (ENSPSNG00000010329) CHTF18 (ENSPSNG00000010433) GNG13 (ENSPSNG00000010605) LMF1 (ENSPSNG00000010668) SOX8 (ENSPSNG00000010776) SSTR5 (ENSPSNG00000004693) C1QTNF8 (ENSPSNG00000004716) TEKT4 (ENSPSNG00000004755) ENSPSNG00000004779 CACNA1H (ENSPSNG00000005454) ENSPSNG00000007652 ENSPSNG00000007703 ENSPSNG00000007742 UBE2I (ENSPSNG00000007796) #22 BAIAP3 (ENSPSNG00000007889) #23 TSR3 (ENSPSNG00000008704) GNPTG (ENSPSNG00000008733) UNKL (ENSPSNG00000008782) #27 UQCC4 (ENSPSNG00000008842) PERCC1 (ENSPSNG00000008871) CLCN7 (ENSPSNG00000009258) ENSPSNG00000009353 TELO2 (ENSPSNG00000009395) IFT140 (ENSPSNG00000009483) TMEM204 (ENSPSNG00000009646) CRAMP1 (ENSPSNG00000009750) JPT2 (ENSPSNG00000010117) MAPK8IP3 (ENSPSNG00000010221) NME3 (ENSPSNG00000010342) Dolphin MODERN SPECIES 3201 UBE2I (ENSTTRG00000011952) #22 BAIAP3 (ENSTTRG00000011958) #23 TSR3 (ENSTTRG00000011979) GNPTG (ENSTTRG00000011982) ENSTTRG00000011985 #27 ENSTTRG00000011990 CCDC154 (ENSTTRG00000011993) CLCN7 (ENSTTRG00000011995) PTX4 (ENSTTRG00000011996) TELO2 (ENSTTRG00000011997) IFT140 (ENSTTRG00000011998) TMEM204 (ENSTTRG00000011999) Pecora ANCESTRAL SPECIES 10 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000158868.g.a ENSGT00940000158868.g.b ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Yarkand deer MODERN SPECIES 1 CIAO3 (ENSCHYG00000021928) ENSCHYG00000022056 RPUSD1 (ENSCHYG00000022411) CHTF18 (ENSCHYG00000022516) GNG13 (ENSCHYG00000022648) ENSCHYG00000022711 SOX8 (ENSCHYG00000022912) SSTR5 (ENSCHYG00000022944) C1QTNF8 (ENSCHYG00000022958) TEKT4 (ENSCHYG00000022987) CACNA1H (ENSCHYG00000023074) ENSCHYG00000023502 ENSCHYG00000023719 ENSCHYG00000023827 ENSCHYG00000024353 ENSCHYG00000000686 #22 BAIAP3 (ENSCHYG00000000754) #23 TSR3 (ENSCHYG00000000981) GNPTG (ENSCHYG00000000992) UNKL (ENSCHYG00000001093) #27 UQCC4 (ENSCHYG00000001141) PERCC1 (ENSCHYG00000001151) CCDC154 (ENSCHYG00000001172) CLCN7 (ENSCHYG00000001248) PTX4 (ENSCHYG00000001547) TELO2 (ENSCHYG00000001588) ENSCHYG00000001722 ENSCHYG00000001737 ENSCHYG00000001757 CRAMP1 (ENSCHYG00000001817) ENSCHYG00000001980 Percora_a ANCESTRAL SPECIES 9 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000158868.g.a ENSGT00940000158868.g.b ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 8 FAM133A (ENSMMSG00000008570) ENSMMSG00000008552 ENSMMSG00000008511 ENSMMSG00000008443 #22 ENSMMSG00000008384 DIAPH2 (ENSMMSG00000008282) ENSMMSG00000008253 ENSMMSG00000008230 ENSMMSG00000008218 ENSMMSG00000008202 PCDH19 (ENSMMSG00000008079) ENSMMSG00000008060 TNMD (ENSMMSG00000008036) TSPAN6 (ENSMMSG00000007947) SRPX2 (ENSMMSG00000007899) ENSMMSG00000007890 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES ENSMMSG00000002868 MSLNL (ENSMMSG00000002818) RPUSD1 (ENSMMSG00000002796) CHTF18 (ENSMMSG00000002776) GNG13 (ENSMMSG00000002756) LMF1 (ENSMMSG00000002736) SOX8 (ENSMMSG00000002719) SSTR5 (ENSMMSG00000002710) C1QTNF8 (ENSMMSG00000002696) TEKT4 (ENSMMSG00000002686) ENSMMSG00000002668 CACNA1H (ENSMMSG00000002593) ENSMMSG00000002565 ENSMMSG00000002486 ENSMMSG00000002259 ENSMMSG00000002225 #22 BAIAP3 (ENSMMSG00000002183) #23 TSR3 (ENSMMSG00000002150) GNPTG (ENSMMSG00000002130) UNKL (ENSMMSG00000002072) #27 ENSMMSG00000002044 PERCC1 (ENSMMSG00000002030) CCDC154 (ENSMMSG00000002000) CLCN7 (ENSMMSG00000001887) PTX4 (ENSMMSG00000001845) TELO2 (ENSMMSG00000001817) TMEM204 (ENSMMSG00000001793) IFT140 (ENSMMSG00000001736) CRAMP1 (ENSMMSG00000001672) JPT2 (ENSMMSG00000001637) ENSMMSG00000001612 Siberian musk deer MODERN SPECIES 339 ENSMMSG00000005268 WLS (ENSMMSG00000005308) DIRAS3 (ENSMMSG00000005467) GNG12 (ENSMMSG00000005481) GADD45A (ENSMMSG00000005535) ENSMMSG00000005637 IL12RB2 (ENSMMSG00000005957) IL23R (ENSMMSG00000006578) ENSMMSG00000006661 SLC35D1 (ENSMMSG00000006681) MIER1 (ENSMMSG00000006725) DNAI4 (ENSMMSG00000006873) INSL5 (ENSMMSG00000007080) DYNLT5 (ENSMMSG00000007108) SGIP1 (ENSMMSG00000007149) ENSMMSG00000007256 #22 PDE4B (ENSMMSG00000007306) LEPR (ENSMMSG00000007649) LEPROT (ENSMMSG00000007926) ENSMMSG00000007989 ENSMMSG00000008200 ENSMMSG00000008256 JAK1 (ENSMMSG00000008290) RAVER2 (ENSMMSG00000008514) CACHD1 (ENSMMSG00000008645) UBE2U (ENSMMSG00000008852) ROR1 (ENSMMSG00000008912) PGM1 (ENSMMSG00000009049) EFCAB7 (ENSMMSG00000009202) ITGB3BP (ENSMMSG00000009277) ALG6 (ENSMMSG00000009336) Bovidae ANCESTRAL SPECIES 11 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000158868.g.a ENSGT00940000158868.g.b ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Caprinae ANCESTRAL SPECIES 7 ENSGT00940000153514.a.a ENSGT00950000182957.b.a.a ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000158868.g.b ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a Goat MODERN SPECIES 17 CIAO3 (ENSCHIG00000018236) ENSCHIG00000005556 MSLNL (ENSCHIG00000011096) RPUSD1 (ENSCHIG00000012872) CHTF18 (ENSCHIG00000008966) GNG13 (ENSCHIG00000022432) LMF1 (ENSCHIG00000022886) SOX8 (ENSCHIG00000016901) SSTR5 (ENSCHIG00000005253) C1QTNF8 (ENSCHIG00000019568) TEKT4 (ENSCHIG00000023465) ENSCHIG00000025112 CACNA1H (ENSCHIG00000018000) ENSCHIG00000025068 ENSCHIG00000013659 UBE2I (ENSCHIG00000017670) #22 BAIAP3 (ENSCHIG00000015762) #23 TSR3 (ENSCHIG00000016515) GNPTG (ENSCHIG00000012080) UNKL (ENSCHIG00000025940) #27 UQCC4 (ENSCHIG00000017912) CCDC154 (ENSCHIG00000013668) CLCN7 (ENSCHIG00000016124) PTX4 (ENSCHIG00000010150) TELO2 (ENSCHIG00000012866) IFT140 (ENSCHIG00000017137) TMEM204 (ENSCHIG00000008739) CRAMP1 (ENSCHIG00000001484) JPT2 (ENSCHIG00000009778) MAPK8IP3 (ENSCHIG00000020649) NME3 (ENSCHIG00000020916) Rambouillet Sheep MODERN SPECIES 16 METRN (ENSOARG00020020331) ANTKMT (ENSOARG00020020360) CCDC78 (ENSOARG00020020441) HAGHL (ENSOARG00020020506) RPUSD1 (ENSOARG00020020730) GNG13 (ENSOARG00020021098) LMF1 (ENSOARG00020021127) SOX8 (ENSOARG00020021219) SSTR5 (ENSOARG00020021254) C1QTNF8 (ENSOARG00020021299) TEKT4 (ENSOARG00020021344) CACNA1H (ENSOARG00020022237) ENSOARG00020026225 TPSB2 (ENSOARG00020026227) ENSOARG00020026229 UBE2I (ENSOARG00020026231) #22 BAIAP3 (ENSOARG00020026237) #23 TSR3 (ENSOARG00020026242) ENSOARG00020026244 UNKL (ENSOARG00020026245) #27 UQCC4 (ENSOARG00020026247) PERCC1 (ENSOARG00020026249) CCDC154 (ENSOARG00020026252) CLCN7 (ENSOARG00020026257) PTX4 (ENSOARG00020026260) TELO2 (ENSOARG00020026262) IFT140 (ENSOARG00020026264) TMEM204 (ENSOARG00020026266) CRAMP1 (ENSOARG00020026270) JPT2 (ENSOARG00020026280) MAPK8IP3 (ENSOARG00020026283) Bovinae ANCESTRAL SPECIES 7 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207 ENSGT00940000158868.g.a ENSGT00940000158868.g.b ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00960000190820 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 American bison DUPLICATION American bison MODERN SPECIES 2926 ENSBBBG00000006300 ENSBBBG00000008209 #22 PTPN13 (ENSBBBG00000000291) SLC10A6 (ENSBBBG00000023627) C4orf36 (ENSBBBG00000023619) AFF1 (ENSBBBG00000006166) KLHL8 (ENSBBBG00000023566) ENSBBBG00000023511 HSD17B13 (ENSBBBG00000023490) HSD17B11 (ENSBBBG00000023455) NUDT9 (ENSBBBG00000023429) SPARCL1 (ENSBBBG00000023397) DSPP (ENSBBBG00000023372) American bison MODERN SPECIES 1609 UBE2I (ENSBBBG00000003818) #22 BAIAP3 (ENSBBBG00000015516) #23 TSR3 (ENSBBBG00000015548) ENSBBBG00000008589 UNKL (ENSBBBG00000015583) #27 CCDC154 (ENSBBBG00000015603) CLCN7 (ENSBBBG00000003900) PTX4 (ENSBBBG00000015630) Bos DUPLICATION Bos ANCESTRAL SPECIES ENSGT00550000075088.a.a.nb #22 Bos_a ANCESTRAL SPECIES ENSGT00550000075088.a.a.nb #22 Domestic yak MODERN SPECIES 18 ENSBGRG00000007732 ENSBGRG00000007567 RPUSD1 (ENSBGRG00000007463) GNG13 (ENSBGRG00000007418) CHTF18 (ENSBGRG00000007318) LMF1 (ENSBGRG00000007200) SOX8 (ENSBGRG00000007158) SSTR5 (ENSBGRG00000007134) C1QTNF8 (ENSBGRG00000007096) TEKT4 (ENSBGRG00000007021) CACNA1H (ENSBGRG00000026596) ENSBGRG00000026590 ENSBGRG00000026579 ENSBGRG00000026570 ENSBGRG00000026541 ENSBGRG00000026529 #22 BAIAP3 (ENSBGRG00000026523) #23 TSR3 (ENSBGRG00000026507) ENSBGRG00000026483 ENSBGRG00000026477 UNKL (ENSBGRG00000026455) #27 UQCC4 (ENSBGRG00000026446) PERCC1 (ENSBGRG00000026443) CCDC154 (ENSBGRG00000026436) CLCN7 (ENSBGRG00000026391) PTX4 (ENSBGRG00000026360) TELO2 (ENSBGRG00000026295) TMEM204 (ENSBGRG00000026263) ENSBGRG00000026261 CRAMP1 (ENSBGRG00000026195) JPT2 (ENSBGRG00000026177) Bos DUPLICATION Bos ANCESTRAL SPECIES 9 ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207.z ENSGT00940000162207.y ENSGT00940000158868.g.a ENSGT00940000158868.g.b ENSGT00550000075088.a.a.ob.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00960000190820 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 Bos_a ANCESTRAL SPECIES 13 ENSGT00950000182957.b.a.b.b ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000156666 ENSGT00940000162207.z ENSGT00940000162207.y ENSGT00940000158868.g.a ENSGT00940000158868.g.b ENSGT00550000075088.a.a.ob.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00960000190820 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002827 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 Wild yak MODERN SPECIES 26 MSLNL (ENSBMUG00000023721) RPUSD1 (ENSBMUG00000023698) CHTF18 (ENSBMUG00000023649) GNG13 (ENSBMUG00000023625) ENSBMUG00000023613 SOX8 (ENSBMUG00000023582) SSTR5 (ENSBMUG00000023573) C1QTNF8 (ENSBMUG00000023566) TEKT4 (ENSBMUG00000023560) ENSBMUG00000023552 CACNA1H (ENSBMUG00000023395) ENSBMUG00000023027 ENSBMUG00000022970 ENSBMUG00000022926 ENSBMUG00000022828 ENSBMUG00000022756 #22 BAIAP3 (ENSBMUG00000022642) #23 TSR3 (ENSBMUG00000022273) ENSBMUG00000022218 UNKL (ENSBMUG00000022212) #27 UQCC4 (ENSBMUG00000022202) CCDC154 (ENSBMUG00000022178) CLCN7 (ENSBMUG00000022135) ENSBMUG00000022093 ENSBMUG00000022086 TELO2 (ENSBMUG00000022079) TMEM204 (ENSBMUG00000022060) IFT140 (ENSBMUG00000022034) CRAMP1 (ENSBMUG00000021918) JPT2 (ENSBMUG00000021647) MAPK8IP3 (ENSBMUG00000020161) Bos_b ANCESTRAL SPECIES 6 ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00550000076453 ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207.z ENSGT00940000162207.y ENSGT00940000158868.g.a ENSGT00940000158868.g.b ENSGT00550000075088.a.a.ob.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00960000190820 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Cow MODERN SPECIES 23 TARP (ENSBTAG00000036154) CTTNBP2 (ENSBTAG00000021469) CFTR (ENSBTAG00000006589) ASZ1 (ENSBTAG00000000169) WNT2 (ENSBTAG00000008097) ST7 (ENSBTAG00000010756) CAPZA2 (ENSBTAG00000004072) MET (ENSBTAG00000006161) CAV1 (ENSBTAG00000017869) CAV2 (ENSBTAG00000049397) TES (ENSBTAG00000021204) ENSBTAG00000055251 TFEC (ENSBTAG00000014228) MDFIC (ENSBTAG00000021543) FOXP2 (ENSBTAG00000011246) UBE2I (ENSBTAG00000054178) #22 PPP1R3A (ENSBTAG00000006733) GPR85 (ENSBTAG00000032844) BMT2 (ENSBTAG00000007608) TMEM168 (ENSBTAG00000021967) LSMEM1 (ENSBTAG00000010555) IFRD1 (ENSBTAG00000010549) ZNF277 (ENSBTAG00000013050) DOCK4 (ENSBTAG00000021182) IMMP2L (ENSBTAG00000004398) ENSBTAG00000045592 LRRN3 (ENSBTAG00000004399) RGS2 (ENSBTAG00000020620) DNAJB9 (ENSBTAG00000046588) THAP5 (ENSBTAG00000021869) GPR141 (ENSBTAG00000002154) Hybrid Bos Indicus MODERN SPECIES 17 MSLNL (ENSBIXG00005004786) RPUSD1 (ENSBIXG00005004794) CHTF18 (ENSBIXG00005027939) GNG13 (ENSBIXG00005027963) LMF1 (ENSBIXG00005028006) SOX8 (ENSBIXG00005007596) SSTR5 (ENSBIXG00005028048) C1QTNF8 (ENSBIXG00005028070) TEKT4 (ENSBIXG00005028080) ENSBIXG00005028087 CACNA1H (ENSBIXG00005004842) ENSBIXG00005028167 ENSBIXG00005028176 ENSBIXG00005028187 ENSBIXG00005002470 ENSBIXG00005002428 #22 BAIAP3 (ENSBIXG00005006545) #23 TSR3 (ENSBIXG00005002420) UNKL (ENSBIXG00005028682) #27 UQCC4 (ENSBIXG00005028709) CCDC154 (ENSBIXG00005004984) CLCN7 (ENSBIXG00005028927) PTX4 (ENSBIXG00005002161) TELO2 (ENSBIXG00005005091) TMEM204 (ENSBIXG00005002103) IFT140 (ENSBIXG00005002075) CRAMP1 (ENSBIXG00005029023) ENSBIXG00005029033 JPT2 (ENSBIXG00005005130) ENSBIXG00005029057 MAPK8IP3 (ENSBIXG00005029132) Bos ANCESTRAL SPECIES 15 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000165276 ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00390000003791.a.a.a ENSGT00530000063424.b ENSGT01030000234574.B.c.a.a ENSGT00940000160897 ENSGT00940000158223 ENSGT00940000155680.d ENSGT00950000183015.D ENSGT00940000153692.A ENSGT00390000006247.e.a ENSGT00550000075088.a.a.ob.b #22 ENSGT00940000155133.b.n ENSGT00950000182808.a.a.a.a.b ENSGT00390000015549 ENSGT00950000182974.a.b ENSGT00940000157583 ENSGT00940000161743 ENSGT00940000160856 ENSGT01100000263481.n.a.b.a.b.b.a.a.a.b.a.a.a.b.b ENSGT00390000017405 ENSGT00510000046787.e.a ENSGT00730000111489 ENSGT00730000111375 ENSGT01030000234638.b.a.b.q.a.a ENSGT01030000234638.b.a.b.q.a.b ENSGT00950000182864.a.b.b.a.b.a.a.b Bos_b ANCESTRAL SPECIES 14 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000165276 ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00390000003791.a.a.a ENSGT00530000063424.b ENSGT01030000234574.B.c.a.a ENSGT00940000160897 ENSGT00940000158223 ENSGT00940000155680.d ENSGT00950000183015.D ENSGT00940000153692.A ENSGT00390000006247.e.a ENSGT00550000075088.a.a.ob.b #22 ENSGT00940000155133.b.n.a ENSGT00950000182808.a.a.a.a.b ENSGT00390000015549 ENSGT00950000182974.a.b ENSGT00940000157583 ENSGT00940000161743 ENSGT00940000160856 ENSGT01100000263481.n.a.b.a.b.b.a.a.a.b.a.a.a.b.b ENSGT00390000017405 ENSGT00510000046787.e.a ENSGT00730000111489 ENSGT00730000111375 ENSGT01030000234638.b.a.b.q.a.a ENSGT01030000234638.b.a.b.q.a.b ENSGT00950000182864.a.b.b.a.b.a.a.b Hybrid Bos Indicus MODERN SPECIES 25 ENSBIXG00005019535 COQ2 (ENSBIXG00005019522) ENSBIXG00005003170 HPSE (ENSBIXG00005019430) ENSBIXG00005019178 HELQ (ENSBIXG00005019158) ENSBIXG00005019139 ABRAXAS1 (ENSBIXG00005019067) ENSBIXG00005018974 NKX6-1 (ENSBIXG00005003082) CDS1 (ENSBIXG00005000063) WDFY3 (ENSBIXG00005018815) ARHGAP24 (ENSBIXG00005018506) MAPK10 (ENSBIXG00005018360) ENSBIXG00005005513 ENSBIXG00005002829 #22 ENSBIXG00005017372 ENSBIXG00005017276 SLC10A6 (ENSBIXG00005017247) ENSBIXG00005002799 ENSBIXG00005017214 C4orf36 (ENSBIXG00005017196) AFF1 (ENSBIXG00005017161) KLHL8 (ENSBIXG00005017118) ENSBIXG00005016946 HSD17B11 (ENSBIXG00005005731) ENSBIXG00005016839 NUDT9 (ENSBIXG00005016830) SPARCL1 (ENSBIXG00005007329) ENSBIXG00005016723 DMP1 (ENSBIXG00005016673) Cow MODERN SPECIES 25 PLAC8B (ENSBTAG00000031750) PLAC8A (ENSBTAG00000009849) COQ2 (ENSBTAG00000005744) ENSBTAG00000046700 HPSE (ENSBTAG00000005745) HELQ (ENSBTAG00000018151) MRPS18C (ENSBTAG00000018155) ABRAXAS1 (ENSBTAG00000014076) GPAT3 (ENSBTAG00000017592) NKX6-1 (ENSBTAG00000002518) CDS1 (ENSBTAG00000045787) WDFY3 (ENSBTAG00000013495) ARHGAP24 (ENSBTAG00000003959) MAPK10 (ENSBTAG00000020048) ENSBTAG00000045839 ENSBTAG00000050276 #22 PTPN13 (ENSBTAG00000014947) ENSBTAG00000047514 ENSBTAG00000050963 C4orf36 (ENSBTAG00000051915) AFF1 (ENSBTAG00000018488) KLHL8 (ENSBTAG00000002455) ENSBTAG00000047432 HSD17B13 (ENSBTAG00000031679) HSD17B11 (ENSBTAG00000006307) ENSBTAG00000052418 NUDT9 (ENSBTAG00000011354) SPARCL1 (ENSBTAG00000004094) DSPP (ENSBTAG00000045714) DMP1 (ENSBTAG00000019132) ENSBTAG00000017829 Bos_a ANCESTRAL SPECIES 21 ENSGT00940000153771.B ENSGT00390000005197.a ENSGT00390000002398.f.b.b ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00390000003791.a.a.a ENSGT00530000063424.b ENSGT01030000234574.B.c.a.a ENSGT00940000160897 ENSGT00940000158223 ENSGT00940000155680.d ENSGT00950000183015.D ENSGT00940000153692.A ENSGT00940000154222.d.b.d.g.a.a ENSGT00390000006247.e.a ENSGT00550000075088.a.a.ob.b #22 ENSGT00940000155133.b.n ENSGT00950000182808.a.a.a.a.b ENSGT00390000015549 ENSGT00950000182974.a.b ENSGT00940000157583 ENSGT00940000161743 ENSGT00940000160856 ENSGT01100000263481.n.a.b.a.b.b.a.a.a.b.a.a.a.b.b ENSGT00390000017405 ENSGT00510000046787.e.a ENSGT00730000111489 ENSGT00730000111375 ENSGT01030000234638.b.a.b.q.a.a ENSGT01030000234638.b.a.b.q.a.b ENSGT00950000182864.a.b.b.a.b.a.a.b Wild yak MODERN SPECIES 2139 MAPK10 (ENSBMUG00000021832) ENSBMUG00000021916 ENSBMUG00000021948 ENSBMUG00000021951 #22 PTPN13 (ENSBMUG00000022207) SLC10A6 (ENSBMUG00000022366) C4orf36 (ENSBMUG00000022376) Atlantogenata ANCESTRAL SPECIES 32 ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000015528 ENSGT00940000153417.A ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Xenarthra ANCESTRAL SPECIES 723 ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00940000158458 Armadillo DUPLICATION Armadillo MODERN SPECIES 2319 ENSDNOG00000034258 ENSDNOG00000048228 ENSDNOG00000037708 #22 TSR3 (ENSDNOG00000019149) GNPTG (ENSDNOG00000034308) ENSDNOG00000038776 #27 Armadillo MODERN SPECIES 2584 ENSDNOG00000037435 #22 ENSDNOG00000044155 ENSDNOG00000043152 CLK4 (ENSDNOG00000004758) Afrotheria ANCESTRAL SPECIES 30 ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 ENSGT00390000008964 ENSGT00530000063937.b Tenrec MODERN SPECIES 13027 UBE2I (ENSETEG00000010849) #22 Afrotheria_a ANCESTRAL SPECIES 29 ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 ENSGT00390000008964 ENSGT00530000063937.b Hyrax MODERN SPECIES 11784 UBE2I (ENSPCAG00000008107) #22 Elephant MODERN SPECIES 442 ENSLAFG00000004757 CIAO3 (ENSLAFG00000004765) ENSLAFG00000027374 ENSLAFG00000031316 RPUSD1 (ENSLAFG00000002115) CHTF18 (ENSLAFG00000002118) GNG13 (ENSLAFG00000002120) LMF1 (ENSLAFG00000010370) SOX8 (ENSLAFG00000010824) SSTR5 (ENSLAFG00000010648) TEKT4 (ENSLAFG00000028197) CACNA1H (ENSLAFG00000029595) ENSLAFG00000027170 ENSLAFG00000007069 ENSLAFG00000031398 UBE2I (ENSLAFG00000018318) #22 BAIAP3 (ENSLAFG00000007230) #23 TSR3 (ENSLAFG00000026304) GNPTG (ENSLAFG00000010446) UNKL (ENSLAFG00000018262) #27 UQCC4 (ENSLAFG00000026451) ENSLAFG00000004047 CLCN7 (ENSLAFG00000003618) PTX4 (ENSLAFG00000012669) TELO2 (ENSLAFG00000003284) TMEM204 (ENSLAFG00000017196) ENSLAFG00000003286 CRAMP1 (ENSLAFG00000020604) JPT2 (ENSLAFG00000016324) MAPK8IP3 (ENSLAFG00000028194) MRPS34 (ENSLAFG00000022475) Marsupialia ANCESTRAL SPECIES 6 ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00400000022459 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207.lb.b ENSGT00940000162207.mb ENSGT00940000162207.lb.a ENSGT00940000158868 ENSGT00550000075088.a.a #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Opossum MODERN SPECIES 5 ENSMODG00000016899 ENSMODG00000028336 SOX8 (ENSMODG00000016905) SSTR5 (ENSMODG00000016906) C1QTNF8 (ENSMODG00000016907) TEKT4 (ENSMODG00000016913) ENSMODG00000016927 CACNA1H (ENSMODG00000016933) ENSMODG00000049394 ENSMODG00000016945 ENSMODG00000016952 ENSMODG00000047196 ENSMODG00000016208 ENSMODG00000042536 ENSMODG00000016201 UBE2I (ENSMODG00000016199) #22 BAIAP3 (ENSMODG00000016195) #23 TSR3 (ENSMODG00000016193) GNPTG (ENSMODG00000016192) UNKL (ENSMODG00000016188) #27 ENSMODG00000016185 ENSMODG00000016183 CLCN7 (ENSMODG00000016179) ENSMODG00000016175 ENSMODG00000016174 TELO2 (ENSMODG00000016164) IFT140 (ENSMODG00000016160) TMEM204 (ENSMODG00000016163) CRAMP1 (ENSMODG00000016154) JPT2 (ENSMODG00000016153) MAPK8IP3 (ENSMODG00000016149) Marsupialia_b DUPLICATION Marsupialia_b DUPLICATION Marsupialia_b ANCESTRAL SPECIES ENSGT00550000075088.a.a.rb.a #22 Tasmanian devil MODERN SPECIES 1 ASAP2 (ENSSHAG00000008132) MBOAT2 (ENSSHAG00000012144) KIDINS220 (ENSSHAG00000013088) ID2 (ENSSHAG00000024722) RNF144A (ENSSHAG00000007808) RSAD2 (ENSSHAG00000028215) CMPK2 (ENSSHAG00000020558) ENSSHAG00000011050 ALLC (ENSSHAG00000012095) COLEC11 (ENSSHAG00000012488) RPS7 (ENSSHAG00000026004) ENSSHAG00000030451 ADI1 (ENSSHAG00000031515) TRAPPC12 (ENSSHAG00000013794) EIPR1 (ENSSHAG00000014426) ENSSHAG00000026621 #22 MYT1L (ENSSHAG00000015433) ENSSHAG00000024001 PXDN (ENSSHAG00000016151) TPO (ENSSHAG00000016930) SNTG2 (ENSSHAG00000026293) TMEM18 (ENSSHAG00000006144) ALKAL2 (ENSSHAG00000004800) ENSSHAG00000005216 SH3YL1 (ENSSHAG00000005860) ENSSHAG00000025463 ENSSHAG00000012831 TDRP (ENSSHAG00000028183) ENSSHAG00000003218 ENSSHAG00000014377 ENSSHAG00000000501 Marsupialia_b ANCESTRAL SPECIES 11 ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00400000022459 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207.lb.b ENSGT00940000162207.mb ENSGT00940000162207.lb.a ENSGT00940000158868 ENSGT00550000075088.a.a.rb.b #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Diprotodontia ANCESTRAL SPECIES 19 ENSGT00510000048339 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00400000022459 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207.lb.b ENSGT00940000162207.mb ENSGT00940000162207.lb.a ENSGT00940000158868 ENSGT00550000075088.a.a.rb.b #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 Wallaby MODERN SPECIES 1272 ENSMEUG00000002603 #22 Diprotodontia_a ANCESTRAL SPECIES 21 ENSGT00550000075029 ENSGT00530000064157.b ENSGT00400000022459 ENSGT00530000063702.b ENSGT00940000159920 ENSGT00940000160265 ENSGT00940000163090 ENSGT00950000182894.B ENSGT00960000187025 ENSGT00940000156666 ENSGT00940000162207.lb.b ENSGT00940000162207.mb ENSGT00940000162207.lb.a ENSGT00940000158868 ENSGT00940000162162.b.a.a.b.a ENSGT00550000075088.a.a.rb.b #22 ENSGT00730000110939.a #23 ENSGT00390000014665 ENSGT00510000048359 ENSGT00940000158822 #27 ENSGT00510000049652 ENSGT00390000002278 ENSGT00940000158458 ENSGT01100000263515.a.a ENSGT00390000006698 ENSGT00940000153417.A ENSGT00390000015528 ENSGT00390000003337 ENSGT00390000007652 ENSGT00940000153496.a.a ENSGT00940000161283 koala MODERN SPECIES 116 ENSPCIG00000006753 TEKT4 (ENSPCIG00000006750) ENSPCIG00000000874 CACNA1H (ENSPCIG00000000891) ENSPCIG00000000936 ENSPCIG00000000959 ENSPCIG00000031722 ENSPCIG00000036966 ENSPCIG00000036431 ENSPCIG00000032535 ENSPCIG00000036999 ENSPCIG00000026547 ENSPCIG00000026546 ENSPCIG00000036953 ENSPCIG00000015617 UBE2I (ENSPCIG00000015620) #22 BAIAP3 (ENSPCIG00000015622) #23 TSR3 (ENSPCIG00000015629) GNPTG (ENSPCIG00000015631) UNKL (ENSPCIG00000015633) #27 ENSPCIG00000015640 ENSPCIG00000031234 CLCN7 (ENSPCIG00000015643) PTX4 (ENSPCIG00000017260) TELO2 (ENSPCIG00000017263) ENSPCIG00000017270 TMEM204 (ENSPCIG00000017273) CRAMP1 (ENSPCIG00000017274) JPT2 (ENSPCIG00000017275) MAPK8IP3 (ENSPCIG00000017276) NME3 (ENSPCIG00000017277) Common wonbat MODERN SPECIES 1009 ENSVURG00010015355 RPUSD1 (ENSVURG00010015345) CHTF18 (ENSVURG00010015328) GNG13 (ENSVURG00010015316) ENSVURG00010015293 LMF1 (ENSVURG00010015263) SOX8 (ENSVURG00010015225) SSTR5 (ENSVURG00010015217) ENSVURG00010015205 TEKT4 (ENSVURG00010015184) CACNA1H (ENSVURG00010012158) ENSVURG00010011978 ENSVURG00010011970 ENSVURG00010011524 ENSVURG00010011474 UBE2I (ENSVURG00010011439) #22 BAIAP3 (ENSVURG00010011383) #23 TSR3 (ENSVURG00010011369) GNPTG (ENSVURG00010011357) UNKL (ENSVURG00010011333) #27 ENSVURG00010011316 ENSVURG00010011295 CLCN7 (ENSVURG00010011261) PTX4 (ENSVURG00010011243) TELO2 (ENSVURG00010011232) TMEM204 (ENSVURG00010011226) IFT140 (ENSVURG00010011205) CRAMP1 (ENSVURG00010011179) MAPK8IP3 (ENSVURG00010011078) NME3 (ENSVURG00010011044) MRPS34 (ENSVURG00010011039) Tasmanian devil MODERN SPECIES ENSSHAG00000032088 LMF1 (ENSSHAG00000015181) SOX8 (ENSSHAG00000022966) SSTR5 (ENSSHAG00000017870) ENSSHAG00000002448 ENSSHAG00000000042 ENSSHAG00000024939 ENSSHAG00000023047 ENSSHAG00000011697 ENSSHAG00000000067 ENSSHAG00000002598 ENSSHAG00000004403 ENSSHAG00000028685 ENSSHAG00000005078 ENSSHAG00000032100 ENSSHAG00000007034 #22 BAIAP3 (ENSSHAG00000007915) #23 TSR3 (ENSSHAG00000029432) UNKL (ENSSHAG00000008411) #27 GNPTG (ENSSHAG00000008285) PERCC1 (ENSSHAG00000009782) ENSSHAG00000009800 CLCN7 (ENSSHAG00000009987) ENSSHAG00000023530 TELO2 (ENSSHAG00000010585) IFT140 (ENSSHAG00000010791) TMEM204 (ENSSHAG00000010939) CRAMP1 (ENSSHAG00000012114) JPT2 (ENSSHAG00000012700) MAPK8IP3 (ENSSHAG00000012766) NME3 (ENSSHAG00000023742) Marsupialia_b ANCESTRAL SPECIES ENSGT00550000075088.a.a.sb #22 Diprotodontia ANCESTRAL SPECIES ENSGT00550000075088.a.a.sb #22 Diprotodontia_a ANCESTRAL SPECIES ENSGT00550000075088.a.a.sb #22 Common wonbat MODERN SPECIES 1073 KIDINS220 (ENSVURG00010010355) ID2 (ENSVURG00010010332) ENSVURG00010010311 RNF144A (ENSVURG00010010295) RSAD2 (ENSVURG00010010282) CMPK2 (ENSVURG00010010275) ENSVURG00010010257 ENSVURG00010010246 ENSVURG00010010228 ENSVURG00010010129 RPS7 (ENSVURG00010010088) ENSVURG00010010067 ADI1 (ENSVURG00010010059) TRAPPC12 (ENSVURG00010010042) EIPR1 (ENSVURG00010010026) ENSVURG00010010012 #22 ENSVURG00010010001 ENSVURG00010009995 ENSVURG00010009988 ENSVURG00010009983 PXDN (ENSVURG00010009961) TPO (ENSVURG00010009648) SNTG2 (ENSVURG00010009567) ENSVURG00010009527 TMEM18 (ENSVURG00010009514) ENSVURG00010009502 ENSVURG00010009496 SH3YL1 (ENSVURG00010009452) ENSVURG00010009429 FBXO25 (ENSVURG00010009409) TDRP (ENSVURG00010009383) Cyclostomata ANCESTRAL SPECIES ENSGT00550000075088.a.a #22 Hagfish MODERN SPECIES 1156 ENSEBUG00000010456 wipi2 (ENSEBUG00000016150) CYTH2 (ENSEBUG00000002099) SLC5A10 (ENSEBUG00000006821) ENSEBUG00000016357 grb2b (ENSEBUG00000008757) ENSEBUG00000003059 ENSEBUG00000000732 EMP1 (ENSEBUG00000004602) ENSEBUG00000004359 ENSEBUG00000002256 ENSEBUG00000001869 ENSEBUG00000004599 ENSEBUG00000002182 nprl3 (ENSEBUG00000004859) ube2ia (ENSEBUG00000008590) #22 ENSEBUG00000016626 ENSEBUG00000003720 ENSEBUG00000002788 ENSEBUG00000000879 eif3s6ip (ENSEBUG00000003610) ENSEBUG00000003402 ndufa6 (ENSEBUG00000014927) ENSEBUG00000005925 ENSEBUG00000015214 ENSEBUG00000001732 ndufa6 (ENSEBUG00000013520) ENSEBUG00000006012 ENSEBUG00000010551 ENSEBUG00000006079 mrps7 (ENSEBUG00000004559) Vertebrata ANCESTRAL SPECIES ENSGT00550000075088.a.b ##22 Gnathostomata ANCESTRAL SPECIES ENSGT00550000075088.a.b ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00550000075088.a.b ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00550000075088.a.b ##22 Coelacanth MODERN SPECIES 1620 HMGXB4 (ENSLACG00000000044) ENSLACG00000001738 EIF3L (ENSLACG00000002387) MIEF1 (ENSLACG00000003406) ATF4 (ENSLACG00000003943) RPS19BP1 (ENSLACG00000022181) TST (ENSLACG00000004955) ube2ib (ENSLACG00000005176) ##22 KCTD17 (ENSLACG00000006025) TMPRSS6 (ENSLACG00000006442) ENSLACG00000008330 #19 ENSLACG00000009736 Actinopterygii ANCESTRAL SPECIES 231 ENSGT00910000147001 ENSGT00940000155729 ENSGT00390000006009.b ENSGT00940000156865 ENSGT00940000157805 ENSGT00390000000411 ENSGT01030000234887 ENSGT00390000013127.a ENSGT00530000063801.a ENSGT00390000016774 ENSGT00510000046773.a.b ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a ##19 ENSGT00940000160104 ENSGT00940000158753 ENSGT00940000159993 ENSGT00390000014000 ENSGT00950000182983.B.a.a Reedfish MODERN SPECIES 3 ENSECRG00000017444 ENSECRG00000017454 ENSECRG00000017478 ENSECRG00000017503 ENSECRG00000017523 ENSECRG00000017538 rrm2b (ENSECRG00000017557) plbd1a (ENSECRG00000017581) ENSECRG00000017620 ENSECRG00000017639 ENSECRG00000017682 atf4b (ENSECRG00000017757) mief1 (ENSECRG00000017769) ENSECRG00000017790 mpst (ENSECRG00000017811) ube2ib (ENSECRG00000017829) ##22 ENSECRG00000017855 ##19 sgsm3 (ENSECRG00000014544) gtpbp1l (ENSECRG00000015440) lgals2b (ENSECRG00000015706) ENSECRG00000015728 ENSECRG00000015788 grap2b (ENSECRG00000015981) fam83fb (ENSECRG00000016009) cyth4b (ENSECRG00000016047) rac2 (ENSECRG00000016088) ENSECRG00000016108 ENSECRG00000016183 ENSECRG00000016203 TMPRSS6 (ENSECRG00000016230) ENSECRG00000016272 Neopterygii ANCESTRAL SPECIES 126 ENSGT01030000234887 ENSGT00390000013127.a ENSGT00530000063801.a.a ENSGT00390000016774 ENSGT00510000046773.a.b.c.b ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a ##19 ENSGT00940000160104 ENSGT00390000014000 ENSGT00950000182983.B.a.a ENSGT00940000157375 ENSGT00940000155404 ENSGT00390000014361 ENSGT00940000156845 ENSGT00940000164530 ENSGT01050000244887.B ENSGT00500000044945.a ENSGT01030000234515.b ENSGT00390000003478 ENSGT00390000003488.a.b.a ENSGT00390000000777 Osteoglossocephalai ANCESTRAL SPECIES 35 ENSGT00390000014361 ENSGT00940000155404 ENSGT00940000157375.c ENSGT00950000182983.B.a.a ENSGT00390000014000 ENSGT00940000160104 ENSGT00510000046773.a.b.c.b ENSGT00390000016774 ENSGT00530000063801.a.a ENSGT01030000234599.a.b.d.b.b ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a ##19 ENSGT00940000157367.b ENSGT00510000048561 ENSGT00940000159653.g.b ENSGT00940000153560.b.b.b.h ENSGT00940000158756 Osteoglossiformes ANCESTRAL SPECIES 242 ENSGT00940000166738 ENSGT00950000182951.A.a.b ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.b.a ENSGT00510000048963 ENSGT00940000157367.a.b.g ENSGT00950000183122.C ENSGT00530000063801.a.a.a ENSGT01030000234599.a.b.d.b.b ENSGT00940000155733.a.b.g ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.a ##19 ENSGT00940000167614.g ENSGT00390000008221.b ENSGT00510000048276 ENSGT00950000182935.B.b.c.d ENSGT00390000017606.a.a ENSGT01100000264550 Asian bonytongue MODERN SPECIES 18 ENSSFOG00015008773 ENSSFOG00015004601 CBX6 (ENSSFOG00015008724) ENSSFOG00015008644 PVALB (ENSSFOG00015008610) ENSSFOG00015008575 ENSSFOG00015008563 adsl (ENSSFOG00015008511) ATF4 (ENSSFOG00015008457) ENSSFOG00015030933 ENSSFOG00015008398 ENSSFOG00015025795 mief1 (ENSSFOG00015008360) ENSSFOG00015030824 mpst (ENSSFOG00015023768) ube2ib (ENSSFOG00015008323) ##22 il2rb (ENSSFOG00015028907) ##19 ENSSFOG00015033272 MGAT3 (ENSSFOG00015027975) TAB1 (ENSSFOG00015008222) SYNGR1 (ENSSFOG00015026828) ENSSFOG00015029338 rpl3 (ENSSFOG00015008083) CACNG2 (ENSSFOG00015023795) ENSSFOG00015008062 ENSSFOG00015030653 ENSSFOG00015032451 ENSSFOG00015030597 ENSSFOG00015010168 rac2 (ENSSFOG00015010142) ENSSFOG00015010123 Clupeocephala ANCESTRAL SPECIES 5 ENSGT00940000157367.a.a ENSGT00940000178227.b ENSGT00940000157367.a.b ENSGT00940000160024 ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234599.a.b.d.b.b.b ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00390000008221.b ENSGT00950000183184.b.b ENSGT00940000160724 ENSGT00940000176123 ENSGT00940000158410.g.a.a ENSGT00950000182950.C ENSGT00940000155494.i ENSGT00940000158410.h ENSGT00940000157015.j ENSGT00390000018397 ENSGT01000000214430 ENSGT00940000171795 ENSGT00510000050089.b Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES 520 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.b.a ##22 ENSGT00390000001260 ENSGT00940000164903.a Otophysi ANCESTRAL SPECIES 376 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.b.a ##22 ENSGT00940000167095.A ENSGT00390000001260 ENSGT00940000164903.a Characiphysae ANCESTRAL SPECIES 49 ENSGT00940000165400 ENSGT01030000234592.A.b.b.b.a ENSGT00940000162478 ENSGT00550000075038.a ENSGT00550000075038.b ENSGT00950000183184.b.a ENSGT00940000158410.g.a.b ENSGT01060000248595.b.a.b.b.a.b ENSGT00940000160609.e ENSGT00390000002069 ENSGT00990000204511 ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.b.a ##22 ENSGT00940000167095.A ENSGT00390000001260 ENSGT00940000164903.a ENSGT00940000154852.a ENSGT00530000066748 ENSGT00940000159861 ENSGT00390000008957 ENSGT00940000160173 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 Channel catfish MODERN SPECIES ccr10 (ENSIPUG00000000289) ENSIPUG00000000291 ENSIPUG00000000293 ENSIPUG00000000296 dcakd (ENSIPUG00000000297) FAM171A2 (ENSIPUG00000000301) CRHR1 (ENSIPUG00000000305) CPT1C (ENSIPUG00000000309) ENSIPUG00000000316 dnaaf3 (ENSIPUG00000000326) ENSIPUG00000000331 gnptg (ENSIPUG00000000335) tsr3 (ENSIPUG00000000336) pdpk1b (ENSIPUG00000000337) #20 ENSIPUG00000000342 #21 ube2ib (ENSIPUG00000000347) ##22 ENSIPUG00000000357 cog7 (ENSIPUG00000000362) ENSIPUG00000000368 SBK1 (ENSIPUG00000000372) ENSIPUG00000000373 nlrc3 (ENSIPUG00000000374) cluap1 (ENSIPUG00000000376) wdr90 (ENSIPUG00000000379) rhot2 (ENSIPUG00000000387) H1F0 (ENSIPUG00000000398) rhbdl1 (ENSIPUG00000000404) zgc:112496 (ENSIPUG00000000420) wdr24 (ENSIPUG00000000424) Anks3 (ENSIPUG00000000435) c1h8orf33 (ENSIPUG00000000439) Characiphysae_b ANCESTRAL SPECIES 99 ENSGT00550000075038.b ENSGT00950000183184.b.a ENSGT00940000158410.g.a.b ENSGT01060000248595.b.a.b.b.a.b ENSGT00940000160609.e ENSGT00390000002069 ENSGT00990000204511.a ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.b.a ##22 ENSGT00940000167095.A ENSGT00390000001260 ENSGT00940000164903.a ENSGT00940000154852.a ENSGT00530000066748 ENSGT00940000159861 ENSGT00390000008957 ENSGT00940000171912 ENSGT00940000160173 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 Characoidei ANCESTRAL SPECIES 60 ENSGT00940000179222 ENSGT00940000165400 ENSGT01030000234592.A.b.b.b.a ENSGT00940000162478 ENSGT00550000075038.a ENSGT00950000183184.b.a ENSGT00940000158410.g.a.b ENSGT01060000248595.b.a.b.b.a.b ENSGT00940000160609.e ENSGT00390000002069 ENSGT00990000204511.a ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.b.a ##22 ENSGT00940000167095.A ENSGT00390000001260 ENSGT00940000164903.a ENSGT00940000154852.a ENSGT00530000066748 ENSGT00940000159861 ENSGT00390000008957 ENSGT00940000160173 ENSGT00940000158109 ENSGT00810000125570 ENSGT00940000160651 ENSGT00530000064671 ENSGT00940000159396 ENSGT00940000156610 ENSGT00390000000306 Red-bellied piranha MODERN SPECIES 70 ccr10 (ENSPNAG00000014227) ENSPNAG00000014225 ENSPNAG00000014220 C1QL1 (ENSPNAG00000014205) dcakd (ENSPNAG00000014194) FAM171A2 (ENSPNAG00000014175) CRHR1 (ENSPNAG00000014160) ENSPNAG00000003026 ENSPNAG00000014014 dnaaf3 (ENSPNAG00000002694) ENSPNAG00000013288 gnptg (ENSPNAG00000002682) tsr3 (ENSPNAG00000002671) pdpk1b (ENSPNAG00000013265) #20 ENSPNAG00000002624 #21 ube2ib (ENSPNAG00000002592) ##22 ENSPNAG00000013152 cog7 (ENSPNAG00000013140) kcnc3b (ENSPNAG00000002550) SBK1 (ENSPNAG00000002535) ENSPNAG00000002526 NLRC3 (ENSPNAG00000013023) cluap1 (ENSPNAG00000013013) WDR90 (ENSPNAG00000012985) rhot2 (ENSPNAG00000012869) h1-0 (ENSPNAG00000006809) ENSPNAG00000002382 ENSPNAG00000012749 rhbdl1 (ENSPNAG00000012743) zgc:112496 (ENSPNAG00000012729) wdr24 (ENSPNAG00000002356) Mexicana tetra MODERN SPECIES 2 ENSAMXG00000025619 ENSAMXG00000037172 C1QL1 (ENSAMXG00000035401) dcakd (ENSAMXG00000012074) ENSAMXG00000039987 FAM171A2 (ENSAMXG00000032013) CRHR1 (ENSAMXG00000038656) ENSAMXG00000012048 ENSAMXG00000012044 dnaaf3 (ENSAMXG00000012033) ENSAMXG00000037020 gnptg (ENSAMXG00000038348) tsr3 (ENSAMXG00000034086) pdpk1b (ENSAMXG00000012001) #20 ENSAMXG00000011993 #21 ube2ib (ENSAMXG00000031406) ##22 ENSAMXG00000040411 cog7 (ENSAMXG00000011966) kcnc3b (ENSAMXG00000011957) NLRC3 (ENSAMXG00000007153) cluap1 (ENSAMXG00000007155) ENSAMXG00000031513 ENSAMXG00000035156 rhot2 (ENSAMXG00000007201) h1-0 (ENSAMXG00000025194) rhbdl1 (ENSAMXG00000007206) zgc:112496 (ENSAMXG00000040622) wdr24 (ENSAMXG00000007215) anks3 (ENSAMXG00000007218) zgc:112185 (ENSAMXG00000007222) ENSAMXG00000037939 Electric eel MODERN SPECIES 174 ENSEEEG00000009238 ENSEEEG00000009240 hspa8b (ENSEEEG00000009266) ENSEEEG00000010559 picalmb (ENSEEEG00000010562) ZPLD1 (ENSEEEG00000010565) alcamb (ENSEEEG00000010582) tsr3 (ENSEEEG00000010806) pdpk1b (ENSEEEG00000010835) #20 ENSEEEG00000011405 #21 ube2ib (ENSEEEG00000011412) ##22 cog7 (ENSEEEG00000011451) kcnc3b (ENSEEEG00000011456) ENSEEEG00000011457 SBK1 (ENSEEEG00000011458) ENSEEEG00000011459 ENSEEEG00000011461 NLRC3 (ENSEEEG00000011464) cluap1 (ENSEEEG00000011471) ENSEEEG00000011474 enpp2 (ENSEEEG00000011475) ENSEEEG00000011477 taf2 (ENSEEEG00000011482) ca14 (ENSEEEG00000011858) ENSEEEG00000011859 prpf3 (ENSEEEG00000011861) Cyprinoidei ANCESTRAL SPECIES 98 ENSGT00940000156610 ENSGT00940000159396 ENSGT00530000064671 ENSGT00940000160651 ENSGT00810000125570 ENSGT00940000158109 ENSGT00940000160173 ENSGT00390000008957 ENSGT00940000159861 ENSGT00530000066748 ENSGT00940000154852.a ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.b.a ##22 ENSGT00940000167095.A ENSGT00390000001260 ENSGT00940000164903.a ENSGT00390000002069 ENSGT01060000248595.b.a.b.b.a.b ENSGT00950000183184.b.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000165400 ENSGT00940000168205 ENSGT01030000234667.a.a.a.a.a ENSGT00940000157371.lb.a ENSGT00940000156292.g.a ENSGT00940000157961.A ENSGT00940000158710 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 617 ENSGT00940000160173 ENSGT00390000008957.g.a ENSGT00940000159861.j ENSGT00940000154852.a.h ENSGT00510000048359.e ENSGT00390000014665.h ENSGT00940000155267.s.b #20 ENSGT00940000160374.d.a.b #21 ENSGT00550000075088.a.b.a.a ##22 ENSGT00940000167095.A.a ENSGT00390000001260.h ENSGT00940000164903.a.d ENSGT01050000246604.B ENSGT01050000246604.A ENSGT01060000248595.b.a.b.b.a.b.b ENSGT00950000183184.b.a.a.a Cyprininae_a ANCESTRAL SPECIES 100 ENSGT00990000214316 ENSGT00940000159396.g.b ENSGT00490000044657 ENSGT00940000160651.d ENSGT00810000125570.f ENSGT00940000158109.c ENSGT00390000008957.h ENSGT00940000159861.i ENSGT00530000066748.e ENSGT00940000154852.a.g ENSGT00510000048359.f ENSGT00390000014665.g ENSGT00940000155267.s.a #20 ENSGT00940000160374.d.a.a #21 ENSGT00550000075088.a.b.a.b ##22 ENSGT00550000075088.a.b.a.a ##22 ENSGT00940000167095.A.b ENSGT00390000001260.g ENSGT00940000154641.C.b.k.b ENSGT00390000002069.a ENSGT01060000248595.b.a.b.b.a.b.a ENSGT00950000183184.b.a.a.b ENSGT00550000075038.d ENSGT00940000162478.e.b ENSGT00940000165400 ENSGT00940000168205.b ENSGT01030000234667.a.a.a.a.a.d ENSGT00940000157371.lb.a ENSGT00940000156292.g.a.e ENSGT00940000157961.A.a.a.b ENSGT00940000158710.c Golden-line barbel MODERN SPECIES 18 zgc:112185 (ENSSGRG00000007483) anks3 (ENSSGRG00000007485) wdr24 (ENSSGRG00000007486) rhbdl1 (ENSSGRG00000007489) h1-0 (ENSSGRG00000007491) rhot2 (ENSSGRG00000007494) WDR90 (ENSSGRG00000007503) cluap1 (ENSSGRG00000007507) NLRC3 (ENSSGRG00000007508) ENSSGRG00000007600 SBK1 (ENSSGRG00000007605) gnptg (ENSSGRG00000007631) tsr3 (ENSSGRG00000007710) pdpk1b (ENSSGRG00000007764) #20 ENSSGRG00000008946 #21 ube2ib (ENSSGRG00000008952) ##22 cog7 (ENSSGRG00000009064) kcnc3b (ENSSGRG00000009295) ENSSGRG00000009302 ENSSGRG00000009303 ENSSGRG00000009336 ENSSGRG00000011083 FAM171A2 (ENSSGRG00000011084) dcakd (ENSSGRG00000011085) C1QL1 (ENSSGRG00000011086) ENSSGRG00000011087 ENSSGRG00000011088 ENSSGRG00000011089 ENSSGRG00000011090 FMNL1 (ENSSGRG00000011095) ENSSGRG00000011300 Common carp reference MODERN SPECIES 14 anks3 (ENSCCRG00000019038) wdr24 (ENSCCRG00000019053) ENSCCRG00000082551 rhbdl1 (ENSCCRG00000056535) h1-0 (ENSCCRG00000067178) rhot2 (ENSCCRG00000032810) ENSCCRG00000056113 cluap1 (ENSCCRG00000063754) ENSCCRG00000052310 ENSCCRG00000079349 ENSCCRG00000078512 gnptg (ENSCCRG00000056331) tsr3 (ENSCCRG00000008029) pdpk1b (ENSCCRG00000052983) #20 ENSCCRG00000055061 #21 ube2ib (ENSCCRG00000007989) ##22 ENSCCRG00000067688 cog7 (ENSCCRG00000013907) kcnc3b (ENSCCRG00000053153) ENSCCRG00000003033 ENSCCRG00000073034 dnaaf3 (ENSCCRG00000006457) ENSCCRG00000002988 ENSCCRG00000055649 ENSCCRG00000059641 ENSCCRG00000080949 ENSCCRG00000081868 ccr10 (ENSCCRG00000017530) ENSCCRG00000067883 ENSCCRG00000053799 ENSCCRG00000056595 Cyprininae ANCESTRAL SPECIES 191 ENSGT00510000049652.a ENSGT00990000214316 ENSGT00940000159396.g.b ENSGT00530000064671.e.b ENSGT00940000160651.d ENSGT00810000125570.f ENSGT00940000158109.c ENSGT00390000008957.h ENSGT00940000159861.i ENSGT00530000066748 ENSGT00940000154852.a.g ENSGT00510000048359.f ENSGT00390000014665.g ENSGT00940000155267.s.a #20 ENSGT00940000160374.d.a.a #21 ENSGT00550000075088.a.b.a.b ##22 ENSGT00940000167095.A.b ENSGT00390000001260.g ENSGT00940000154641.C.b.k.b ENSGT00390000002069.a ENSGT01060000248595.b.a.b.b.a.b.a ENSGT00950000183184.b.a.a.b ENSGT00550000075038.d ENSGT00940000162478.e.b ENSGT00940000165400 ENSGT00940000168205.b ENSGT01030000234667.a.a.a.a.a.d ENSGT00940000157371.lb.a ENSGT00940000156292.g.a.e ENSGT00940000157961.A.a.a.b ENSGT00940000158710.c Goldfish MODERN SPECIES 1513 rab11fip3 (ENSCARG00000041930) decr2 (ENSCARG00000041957) ENSCARG00000042123 ENSCARG00000042145 wdr24 (ENSCARG00000042187) zgc:112496 (ENSCARG00000042296) rhbdl1 (ENSCARG00000042322) h1-0 (ENSCARG00000042361) NLRC3 (ENSCARG00000042899) ENSCARG00000043086 SBK1 (ENSCARG00000043179) tsr3 (ENSCARG00000043191) pdpk1b (ENSCARG00000043425) #20 ENSCARG00000046296 #21 ENSCARG00000046336 ube2ib (ENSCARG00000046367) ##22 cog7 (ENSCARG00000046443) kcnc3b (ENSCARG00000046571) ENSCARG00000046606 ENSCARG00000046643 dnaaf3 (ENSCARG00000028963) CPT1C (ENSCARG00000029049) FAM171A2 (ENSCARG00000029762) C1QL1 (ENSCARG00000029770) ENSCARG00000029772 ccr10 (ENSCARG00000029777) ENSCARG00000029785 FMNL1 (ENSCARG00000029794) SRCIN1 (ENSCARG00000029951) GRB7 (ENSCARG00000030010) arf2b (ENSCARG00000030040) Cyprininae_a ANCESTRAL SPECIES 100 ENSGT00510000049652.a ENSGT00990000214316 ENSGT00940000159396.g.b ENSGT00490000044657 ENSGT00940000160651.d ENSGT00810000125570.f ENSGT00940000158109.c ENSGT00390000008957.h ENSGT00940000159861.i ENSGT00530000066748.e ENSGT00940000154852.a.g ENSGT00510000048359.f ENSGT00390000014665.g ENSGT00940000155267.s.a #20 ENSGT00940000160374.d.a.a #21 ENSGT00550000075088.a.b.a.b ##22 ENSGT00550000075088.a.b.a.a ##22 ENSGT00940000167095.A.b ENSGT00390000001260.g ENSGT00940000154641.C.b.k.b ENSGT00390000002069.a ENSGT01060000248595.b.a.b.b.a.b.a ENSGT00950000183184.b.a.a.b ENSGT00550000075038.d ENSGT00940000162478.e.b ENSGT00940000165400 ENSGT00940000168205.b ENSGT01030000234667.a.a.a.a.a.d ENSGT00940000157371.lb.a ENSGT00940000156292.g.a.e ENSGT00940000157961.A.a.a.b Golden-line barbel MODERN SPECIES 269 ENSSGRG00000048880 #21 ube2ib (ENSSGRG00000048872) ##22 cog7 (ENSSGRG00000048698) kcnc3b (ENSSGRG00000048693) ENSSGRG00000048691 ENSSGRG00000048690 CPT1C (ENSSGRG00000048198) FAM171A2 (ENSSGRG00000048190) dcakd (ENSSGRG00000048189) C1QL1 (ENSSGRG00000048188) ENSSGRG00000048187 ccr10 (ENSSGRG00000048186) ENSSGRG00000048185 FMNL1 (ENSSGRG00000048183) srcin1b (ENSSGRG00000048180) GRB7 (ENSSGRG00000048179) ENSSGRG00000048178 Zebrafish MODERN SPECIES 16 anks3 (ENSDARG00000038557) wdr24 (ENSDARG00000025507) zgc:112496 (ENSDARG00000004274) rhbdl1 (ENSDARG00000087040) h1-0 (ENSDARG00000038559) rhot2 (ENSDARG00000056328) WDR90 (ENSDARG00000079241) cluap1 (ENSDARG00000079110) NLRC3 (ENSDARG00000103146) ENSDARG00000092499 SBK1 (ENSDARG00000056294) gnptg (ENSDARG00000038566) tsr3 (ENSDARG00000038567) pdpk1b (ENSDARG00000018285) #20 KCTD5 (ENSDARG00000098817) #21 ube2ib (ENSDARG00000007438) ##22 cog7 (ENSDARG00000061372) kcnc3b (ENSDARG00000098816) dnaaf3 (ENSDARG00000092662) ENSDARG00000036304 ENSDARG00000061660 FAM171A2 (ENSDARG00000079656) dcakd (ENSDARG00000061638) ENSDARG00000061672 ENSDARG00000087020 ccr10 (ENSDARG00000040643) ENSDARG00000056502 ENSDARG00000104263 srcin1b (ENSDARG00000101812) GRB7 (ENSDARG00000042726) arf2b (ENSDARG00000016393) Clupeiformes ANCESTRAL SPECIES 262 ENSGT01090000260051.b.a.a.b.a ENSGT00940000163949.a ENSGT00550000075078 ENSGT00390000005900 ENSGT00950000182881.a.a.b.i.a ENSGT00950000182910.b.g.a ENSGT00940000166481 ENSGT00940000167630 ENSGT00940000165368 ENSGT00940000167839 ENSGT01080000257420.C.b.b.c.b ENSGT00510000048359 ENSGT00390000014665 ENSGT00940000155267 #20 ENSGT00940000160374 #21 ENSGT00550000075088.a.b.a ##22 ENSGT00390000001260 ENSGT00940000164903.a Atlantic herring MODERN SPECIES 15 zgc:56095 (ENSCHAG00000013770) ENSCHAG00000013740 ENSCHAG00000013731 ENSCHAG00000013693 stat5b (ENSCHAG00000013587) ENSCHAG00000013548 ENSCHAG00000013471 ENSCHAG00000013455 ENSCHAG00000013426 ENSCHAG00000013274 ENSCHAG00000013099 gnptg (ENSCHAG00000013077) tsr3 (ENSCHAG00000013002) pdpk1b (ENSCHAG00000012143) #20 kctd5a (ENSCHAG00000012072) #21 ube2ib (ENSCHAG00000012026) ##22 cog7 (ENSCHAG00000011849) kcnc3b (ENSCHAG00000011815) ogfod3 (ENSCHAG00000011731) ENSCHAG00000011723 ENSCHAG00000011654 ENSCHAG00000010401 dlgap5 (ENSCHAG00000010329) ccz1 (ENSCHAG00000009621) pvalb9 (ENSCHAG00000009595) ENSCHAG00000009581 pvalb2 (ENSCHAG00000009511) bhlha15 (ENSCHAG00000009497) TECPR1 (ENSCHAG00000009270) baiap2l1a (ENSCHAG00000009001) gspt1 (ENSCHAG00000006964) Otomorpha ANCESTRAL SPECIES 27 ENSGT00940000159653.g.a ENSGT00940000178227.a ENSGT00940000157367.a.a ENSGT00940000160024 ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00950000183045.A.b ENSGT00970000196672 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00390000008221.b ENSGT00940000160724 ENSGT00940000176123 ENSGT00940000158410.g.a.a ENSGT00950000182950.C ENSGT00530000063688.b.nb.b ENSGT00940000155494.j ENSGT01030000234570.d.b.a.b.b.a.a ENSGT00940000159417 ENSGT00950000182818.D ENSGT00390000018397 ENSGT00990000204364 ENSGT00940000171795 Otophysi ANCESTRAL SPECIES 273 ENSGT00950000182979.a.a.a.a ##30 ENSGT00940000163663.A.a ##29 ENSGT00730000111100.a.a ENSGT00940000158365.f.b ENSGT00940000155497.a.a ENSGT00940000153657.A ENSGT00390000001347 ENSGT00940000155618 ENSGT00940000165277.b ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00950000183045.A.b ENSGT00970000196672 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00390000008221.b Characiphysae ANCESTRAL SPECIES 26 ENSGT00390000001347 ENSGT00940000153657.A ENSGT00940000155497.a.a ENSGT00940000158365.f.b ENSGT00730000111100.a.a ENSGT00940000160179 ENSGT00390000013127.a ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00390000008221.b ENSGT00940000153909.a ENSGT00940000156748 ENSGT00390000012605 ENSGT00390000015438 ENSGT00550000074902 ENSGT00940000153432.A.a.i ENSGT00390000014620 ENSGT00940000168279 ENSGT00940000154744.a.a ENSGT00730000111191 ENSGT00940000156854.t.a.a ENSGT00940000176898 Characiphysae_b ANCESTRAL SPECIES 235 ENSGT00940000155618 ENSGT00390000001347 ENSGT00940000153657.A ENSGT00940000155497.a.a ENSGT00940000158365.f.b ENSGT00730000111100.a.a ENSGT00940000160179 ENSGT00390000013127.a ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b.b ##22 Characoidei ANCESTRAL SPECIES 272 ENSGT01100000263483.F.b.a.b ENSGT00920000149129 ENSGT00950000182979.a.a.a.a ##30 ENSGT00940000163663.A.a ##29 ENSGT00940000155618 ENSGT00390000001347 ENSGT00940000153657.A ENSGT00940000155497.a.a ENSGT00940000158365.f.b ENSGT00730000111100.a.a ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b.b ##22 Red-bellied piranha MODERN SPECIES 392 ENSPNAG00000019341 ENSPNAG00000019332 ENSPNAG00000003590 ENSPNAG00000019301 rbx1 (ENSPNAG00000019261) st13 (ENSPNAG00000019242) xpnpep3 (ENSPNAG00000019129) EP300 (ENSPNAG00000019108) cbx7a (ENSPNAG00000003564) desi1a (ENSPNAG00000018941) ENSPNAG00000018915 ENSPNAG00000018854 mief1 (ENSPNAG00000018819) ENSPNAG00000003552 mpst (ENSPNAG00000018758) ENSPNAG00000018749 ##22 ENSPNAG00000018720 Mexicana tetra MODERN SPECIES 15 ENSAMXG00000044030 ##30 ENSAMXG00000025001 ##29 ENSAMXG00000040045 ENSAMXG00000029440 rbx1 (ENSAMXG00000030622) st13 (ENSAMXG00000038131) xpnpep3 (ENSAMXG00000013643) EP300 (ENSAMXG00000013602) ENSAMXG00000013576 desi1a (ENSAMXG00000030892) ENSAMXG00000008242 ENSAMXG00000030217 mief1 (ENSAMXG00000013513) ENSAMXG00000038245 mpst (ENSAMXG00000038351) ENSAMXG00000040742 ##22 pald1a (ENSAMXG00000033318) ENSAMXG00000037084 ENSAMXG00000038387 ENSAMXG00000038937 ENSAMXG00000041694 ENSAMXG00000030472 ENSAMXG00000043402 OPRD1 (ENSAMXG00000032485) ENSAMXG00000000019 edn2 (ENSAMXG00000040461) ENSAMXG00000041708 serinc2 (ENSAMXG00000000681) ENSAMXG00000034229 stmn1a (ENSAMXG00000037071) ENSAMXG00000031628 Electric eel MODERN SPECIES 356 st13 (ENSEEEG00000023274) rbx1 (ENSEEEG00000023280) ENSEEEG00000023281 napsa (ENSEEEG00000023282) mief1 (ENSEEEG00000023286) ENSEEEG00000023288 mpst (ENSEEEG00000023290) ENSEEEG00000023291 ##22 ENSEEEG00000023295 ssuh2.4 (ENSEEEG00000023299) ENSEEEG00000023301 RPL32 (ENSEEEG00000023305) cand2 (ENSEEEG00000023309) sec13 (ENSEEEG00000023311) GRIP2 (ENSEEEG00000023313) slc6a6b (ENSEEEG00000023351) LSM3 (ENSEEEG00000023576) zgc:171566 (ENSEEEG00000023578) mcm2 (ENSEEEG00000023589) ccdc51 (ENSEEEG00000023629) ENSEEEG00000023631 ENSEEEG00000023632 dnase1l4.2 (ENSEEEG00000023633) Cyprinoidei ANCESTRAL SPECIES 77 ENSGT00950000182979.a.a.a.a ##30 ENSGT00940000163663.A.a ##29 ENSGT00730000111100.a.a ENSGT00940000158365.f.b ENSGT00940000155497.a.a ENSGT00940000153657.A ENSGT00390000001347 ENSGT00940000155618 ENSGT00940000165277.b ENSGT00940000160179 ENSGT00390000013127.a ENSGT00740000115744 ENSGT00950000183045.A.b ENSGT00970000196672 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00390000008221.b ENSGT00940000154705.A.a ENSGT00940000155563.k.a.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00940000153882.a.b.a ENSGT00530000063753.B.c ENSGT00440000038745.a.a.a ENSGT00390000010047.g.a ENSGT00530000063753.A.b Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 73 ENSGT00940000163663.A.a.c ##29 ENSGT00730000111100.a.a.a ENSGT00940000158365.f.b.h ENSGT00940000155497.a.a.a ENSGT00940000153657.A.i ENSGT00390000001347.d ENSGT00940000155618 ENSGT00940000165277.b ENSGT00940000155733.a.b.b.a.a ENSGT00390000013127.a.u ENSGT00740000115744 ENSGT00510000046773.a.b.c.a.b ENSGT00950000183045.A.b ENSGT00970000196672.b ENSGT00510000046773.a.b.c.a.a ENSGT00550000075088.a.b.b.a.a ##22 ENSGT00510000049239.a.c.a ##19 ENSGT00940000160396.c ENSGT00390000008221.b.b ENSGT00940000154705.A.a.d ENSGT00940000155563.k.a.a.a ENSGT01050000244891.E.a.b.a.a ENSGT00940000154830.c.a ENSGT00940000155738.ab.a.b ENSGT00940000154272.B.b.b ENSGT00940000158772.b.a ENSGT00940000153882.a.b.a.j.a ENSGT00530000063753.A.b.b ENSGT00530000063599.A.f ENSGT00440000038745.a.a.b.g.b ENSGT00940000156865.b.b Cyprininae_a ANCESTRAL SPECIES 93 ENSGT00950000182979.a.a.a.a.j ##30 ENSGT00940000163663.A.a.c ##29 ENSGT00730000111100.a.a.a ENSGT00940000158365.f.b.h ENSGT00940000155497.a.a.a ENSGT00940000153657.A.i ENSGT00390000001347.d ENSGT00940000155618 ENSGT00940000165277.b ENSGT00940000155733.a.b.b.a.a ENSGT00390000013127.a.u ENSGT00990000209944 ENSGT00970000196672.a ENSGT00970000196672.b ENSGT00510000046773.a.b.c.a.a ENSGT00550000075088.a.b.b.a.a ##22 ENSGT00510000049239.a.c.a ##19 ENSGT00940000160396.c ENSGT00390000008221.b.b ENSGT00940000154705.A.a.d ENSGT00940000155563.k.a.a.a ENSGT01050000244891.E.a.b.a.a ENSGT00940000154830.c.a ENSGT00940000155738.ab.a.b ENSGT00940000154272.B.b.b ENSGT00940000158772.b.a ENSGT00940000153882.a.b.a.j.a ENSGT00530000063753.A.b.b ENSGT00530000063599.A.f ENSGT00440000038745.a.a.b.g.b ENSGT00940000156865.b.b Common carp reference MODERN SPECIES 3 ENSCCRG00000014780 ENSCCRG00000069149 slc25a17 (ENSCCRG00000014784) ENSCCRG00000080080 ##30 ENSCCRG00000080490 ##29 desi1a (ENSCCRG00000058164) cbx7a (ENSCCRG00000013587) ENSCCRG00000013652 xpnpep3 (ENSCCRG00000010308) st13 (ENSCCRG00000026570) rbx1 (ENSCCRG00000010324) ENSCCRG00000049054 mief1 (ENSCCRG00000078221) ENSCCRG00000055363 mpst (ENSCCRG00000056938) ENSCCRG00000059620 ##22 ENSCCRG00000068871 il2rb (ENSCCRG00000004197) ##19 ENSCCRG00000069412 mgat3a (ENSCCRG00000078535) ddx5 (ENSCCRG00000073555) smurf2 (ENSCCRG00000068445) kpna2 (ENSCCRG00000010672) ENSCCRG00000010871 grb2b (ENSCCRG00000012723) ENSCCRG00000071516 ENSCCRG00000057714 ntn1b (ENSCCRG00000042266) ENSCCRG00000064846 mfsd6l (ENSCCRG00000054768) zgc:171844 (ENSCCRG00000000941) Goldfish MODERN SPECIES 22 CLIP3 (ENSCARG00000062024) ENSCARG00000062297 ##29 desi1a (ENSCARG00000062303) cbx7a (ENSCARG00000062314) EP300 (ENSCARG00000062414) xpnpep3 (ENSCARG00000063641) ENSCARG00000063786 ENSCARG00000063803 st13 (ENSCARG00000063847) rbx1 (ENSCARG00000064356) ENSCARG00000000212 mief1 (ENSCARG00000000252) ENSCARG00000000263 ENSCARG00000000268 mpst (ENSCARG00000000274) ENSCARG00000000284 ##22 il2rb (ENSCARG00000000295) ##19 ENSCARG00000000304 mgat3a (ENSCARG00000000313) ddx5 (ENSCARG00000000338) smurf2 (ENSCARG00000000493) kpna2 (ENSCARG00000000964) BPTF (ENSCARG00000001062) grb2b (ENSCARG00000001169) MCHR1 (ENSCARG00000001171) ENSCARG00000001175 ENSCARG00000001187 ENSCARG00000001190 sp100.4 (ENSCARG00000001193) ENSCARG00000001196 dnal4a (ENSCARG00000001203) Cyprininae ANCESTRAL SPECIES 24 ENSGT00940000166738.d ENSGT01060000249904.c.a ENSGT01060000249904.c.b ENSGT00940000169047.b.b.a.b ENSGT00940000169047.b.a.a ENSGT00940000163472.i.a.a.e ENSGT00920000149129.k ENSGT01100000263483.F.b.a.b.b.a ENSGT00950000182979.a.a.a.a.i ##30 ENSGT00940000163663.A.a.d ##29 ENSGT00730000111100.a.a.b ENSGT00940000158365.f.b.g ENSGT00940000155497.a.a.b ENSGT00940000153657.A.j ENSGT00390000001347.c ENSGT00550000075088.a.b.b.a.b ##22 ENSGT00510000049239.a.c.b ##19 ENSGT00940000160396.d ENSGT00390000008221.b.a ENSGT00940000154705.A.a.c ENSGT00940000155563.k.a.a.b ENSGT01050000244891.E.a.b.a.b ENSGT00940000154830.c.b ENSGT00940000155738.ab.a.a ENSGT00940000154272.B.b.a ENSGT00940000158772.b.b ENSGT00940000153882.a.b.a.j.b ENSGT00530000063753.A.b.a ENSGT00530000063599.A.e ENSGT00440000038745.a.a.b.g.a ENSGT00940000156865.b.a Goldfish MODERN SPECIES 20 ENSCARG00000013962 ENSCARG00000013953 ##30 ENSCARG00000013946 ##29 ENSCARG00000013945 desi1a (ENSCARG00000013942) cbx7a (ENSCARG00000013935) EP300 (ENSCARG00000030241) st13 (ENSCARG00000029876) RBX1 (ENSCARG00000029867) ENSCARG00000029860 ENSCARG00000029252 mief1 (ENSCARG00000029213) ENSCARG00000029206 ENSCARG00000029195 ENSCARG00000029189 ENSCARG00000029002 ##22 il2rb (ENSCARG00000028973) ##19 ENSCARG00000028968 mgat3a (ENSCARG00000028951) ddx5 (ENSCARG00000027931) smurf2 (ENSCARG00000027623) kpna2 (ENSCARG00000027470) BPTF (ENSCARG00000027136) grb2b (ENSCARG00000027104) mch-r1 (ENSCARG00000027093) ENSCARG00000027088 ntn1b (ENSCARG00000027066) ENSCARG00000027058 ENSCARG00000027030 mfsd6l (ENSCARG00000027020) zgc:171844 (ENSCARG00000027007) Cyprininae_a ANCESTRAL SPECIES 12 ENSGT00940000169047.b.a.a ENSGT00940000163472.i.a.a.e ENSGT00920000149129.k ENSGT01100000263483.F.b.a.b.b.a ENSGT00950000182979.a.a.a.a.i ##30 ENSGT00940000163663.A.a.d ##29 ENSGT00730000111100.a.a.b ENSGT00940000158365.f.b.g ENSGT00940000155497.a.a.b ENSGT00940000153657.A.j ENSGT00390000001347.c ENSGT00940000155733.a.b.b.b ENSGT00390000013127.a.t ENSGT00740000115744 ENSGT00510000046773.a.b.c.a.b ENSGT00550000075088.a.b.b.a.b ##22 ENSGT00510000049239.a.c.b ##19 ENSGT00940000160396.d ENSGT00390000008221.b.a ENSGT00940000154705.A.a.c ENSGT00940000155563.k.a.a.b ENSGT01050000244891.E.b ENSGT00940000154830.c.b ENSGT00940000155738.ab.a.a ENSGT00940000154272.B.b.a ENSGT00940000158772.b.b ENSGT00940000153882.a.b.a.j.b ENSGT00530000063753.A.b.a ENSGT00530000063599.A.e ENSGT00440000038745.a.a.b.g.a ENSGT00940000156865.b.a Golden-line barbel MODERN SPECIES 51 ENSSGRG00000018177 slc25a17 (ENSSGRG00000018176) ENSSGRG00000018174 ##30 ENSSGRG00000018171 ##29 desi1a (ENSSGRG00000018170) cbx7a (ENSSGRG00000018169) EP300 (ENSSGRG00000017514) xpnpep3 (ENSSGRG00000017418) st13 (ENSSGRG00000017415) ENSSGRG00000017412 ENSSGRG00000017410 mief1 (ENSSGRG00000017409) ENSSGRG00000017408 ENSSGRG00000017407 mpst (ENSSGRG00000017404) ENSSGRG00000017196 ##22 il2rb (ENSSGRG00000017193) ##19 ENSSGRG00000017192 ddx5 (ENSSGRG00000016574) smurf2 (ENSSGRG00000016569) ENSSGRG00000016568 ENSSGRG00000016567 ENSSGRG00000016566 BPTF (ENSSGRG00000015813) grb2b (ENSSGRG00000015809) ENSSGRG00000015794 ntn1b (ENSSGRG00000015779) ENSSGRG00000015776 mfsd6l (ENSSGRG00000015775) zgc:171844 (ENSSGRG00000015774) tom1 (ENSSGRG00000015773) Common carp reference MODERN SPECIES 1 ENSCCRG00000022487 ##30 ENSCCRG00000081929 ENSCCRG00000056851 ##29 desi1a (ENSCCRG00000053242) cbx7a (ENSCCRG00000057686) ENSCCRG00000027159 st13 (ENSCCRG00000010318) ENSCCRG00000027541 ENSCCRG00000069995 ENSCCRG00000010333 ENSCCRG00000066283 mief1 (ENSCCRG00000050462) ENSCCRG00000068402 ENSCCRG00000061903 mpst (ENSCCRG00000054736) ENSCCRG00000010340 ##22 il2rb (ENSCCRG00000060467) ##19 ENSCCRG00000079701 mgat3a (ENSCCRG00000058699) ddx5 (ENSCCRG00000004157) smurf2 (ENSCCRG00000004233) ENSCCRG00000004214 ENSCCRG00000012690 grb2b (ENSCCRG00000054207) ENSCCRG00000022532 ENSCCRG00000060557 ntn1b (ENSCCRG00000033537) ENSCCRG00000071168 ENSCCRG00000041653 ENSCCRG00000053479 mfsd6l (ENSCCRG00000000939) Cyprininae ANCESTRAL SPECIES ENSGT00550000075088.a.b.b.b ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00550000075088.a.b.b.b ##22 Golden-line barbel MODERN SPECIES 4683 ENSSGRG00000003765 ##22 Clupeiformes ANCESTRAL SPECIES 29 ENSGT00940000161265.e.a ENSGT01060000248591.a.a.a.b.a ENSGT00940000154405.a.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00510000048963 ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a ENSGT00530000063801.a.b ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00950000183045.A.b ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00390000008221.b ENSGT00950000182935.B.b.c ENSGT00870000136549 ENSGT01050000244893.c.a.b.h ENSGT00950000183184.b.b ENSGT00940000160724 ENSGT00940000176123 ENSGT00940000158410.g.a.a ENSGT00950000182950.C ENSGT00530000063688.b.nb.b ENSGT00940000155494.j ENSGT01030000234570.d.b.a.b.b.a.a ENSGT01100000263847 Atlantic herring MODERN SPECIES grnb (ENSCHAG00000000066) ENSCHAG00000000059 ENSCHAG00000000058 ENSCHAG00000000056 ENSCHAG00000000054 ENSCHAG00000000052 ENSCHAG00000020401 ENSCHAG00000020328 ENSCHAG00000020311 ENSCHAG00000020301 atf4b (ENSCHAG00000020262) ENSCHAG00000020086 mief1 (ENSCHAG00000020061) ENSCHAG00000020029 mpst (ENSCHAG00000020020) ENSCHAG00000019990 ##22 il2rb (ENSCHAG00000019958) ##19 C1QTNF6 (ENSCHAG00000019948) mgat3a (ENSCHAG00000019944) syngr1a (ENSCHAG00000019932) FAM171A2 (ENSCHAG00000019910) itga2b (ENSCHAG00000019890) ENSCHAG00000019853 CRHR1 (ENSCHAG00000018889) ENSCHAG00000018817 cdc27 (ENSCHAG00000018759) KANSL1 (ENSCHAG00000018750) ENSCHAG00000018694 myl4 (ENSCHAG00000018674) ENSCHAG00000018663 SCN4A (ENSCHAG00000017312) Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234599.a.b.d.b.b.b ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00990000211443 ENSGT00950000183045.A.b ENSGT00970000196672 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00390000008221.b ENSGT00950000183184.b.b ENSGT00940000160724 ENSGT00940000176123 ENSGT00940000158410.g.a.a ENSGT00950000182950.C ENSGT00530000063688.b.nb.b ENSGT00940000155494.j ENSGT01030000234570.d.b.a.b.b.a.a ENSGT00940000159417 ENSGT00940000169702 ENSGT00940000166534 ENSGT01100000264459 Acanthomorphata ANCESTRAL SPECIES 101 ENSGT00950000183122.C ENSGT00940000162556.D.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT01040000241311 ENSGT00940000167870 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00990000211443 ENSGT00950000183045.A.b ENSGT00970000196672 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 Euacanthomorphacea ANCESTRAL SPECIES 5 ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00990000211443 ENSGT00950000183045.A.b ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 ENSGT00390000002762.a.b ENSGT00390000018509.a Pinecone sodierfish MODERN SPECIES 22 ENSMMDG00005011080 ENSMMDG00005011077 tmem150b (ENSMMDG00005011075) adsl (ENSMMDG00005011023) ENSMMDG00005011010 atf4b (ENSMMDG00005011007) ENSMMDG00005011005 ENSMMDG00005010986 mief1 (ENSMMDG00005010983) ENSMMDG00005010980 ENSMMDG00005010979 ENSMMDG00005010977 ENSMMDG00005010975 TST (ENSMMDG00005010973) mpst (ENSMMDG00005010971) ENSMMDG00005010965 ##22 il2rb (ENSMMDG00005010957) ##19 ENSMMDG00005010954 ENSMMDG00005010953 chst12a (ENSMMDG00005010951) CARD11 (ENSMMDG00005010434) ap5z1 (ENSMMDG00005010407) mmd2a (ENSMMDG00005010351) wipi2 (ENSMMDG00005010188) ENSMMDG00005010170 smurf1 (ENSMMDG00005006730) FSCN1 (ENSMMDG00005006675) ENSMMDG00005006671 TNRC18 (ENSMMDG00005006669) slc29a4a (ENSMMDG00005006664) atp5mf (ENSMMDG00005006656) Percomorphaceae ANCESTRAL SPECIES 3 ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Tiger tail seahorse MODERN SPECIES 262 ENSHCOG00000006485 ENSHCOG00000006528 ENSHCOG00000006535 pvalb6 (ENSHCOG00000006608) ENSHCOG00000006739 PDGFB (ENSHCOG00000006777) adsl (ENSHCOG00000006818) ENSHCOG00000006826 atf4b (ENSHCOG00000006835) ENSHCOG00000006846 ENSHCOG00000006853 mief1 (ENSHCOG00000006873) ENSHCOG00000006884 mpst (ENSHCOG00000006897) mpst (ENSHCOG00000006906) ENSHCOG00000006919 ##22 ENSHCOG00000006940 ENSHCOG00000000207 chst12a (ENSHCOG00000006968) CARD11 (ENSHCOG00000007033) ap5z1 (ENSHCOG00000007072) mmd2a (ENSHCOG00000007105) wipi2 (ENSHCOG00000007134) smurf1 (ENSHCOG00000007183) ENSHCOG00000007204 FSCN1 (ENSHCOG00000007218) ENSHCOG00000007233 ENSHCOG00000007252 TNRC18 (ENSHCOG00000000247) Percomorphaceae_B ANCESTRAL SPECIES 2 ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Ovalentaria ANCESTRAL SPECIES 1 ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Ovalentaria_B ANCESTRAL SPECIES ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Pomacentridae ANCESTRAL SPECIES 225 ENSGT00940000157367.a.a ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT00740000115744 ENSGT00390000013127.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 Pomacentridae_A ANCESTRAL SPECIES 184 ENSGT00940000157367.a.a ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT00740000115744 ENSGT00390000013127.a ENSGT00550000075088.a.b ##22 ENSGT00940000177422 ENSGT00510000048539 ENSGT00550000074885 ENSGT00940000167671 ENSGT00940000154700 ENSGT00950000182838.A.a.a ENSGT00940000167194 ENSGT00940000160972 ENSGT00940000158268.b ENSGT00440000037417.B.a Amphiprion ANCESTRAL SPECIES 226 ENSGT00940000157367.a.a ENSGT00950000183122.C ENSGT00940000166816 ENSGT00940000167870 ENSGT00740000115744 ENSGT00390000013127.a ENSGT00550000075088.a.b ##22 ENSGT00940000177422 ENSGT00510000048539 ENSGT00550000074885 ENSGT00940000167671 ENSGT00940000154700 ENSGT00950000182838.A.a.a ENSGT00940000167194 ENSGT00940000160972 ENSGT00940000158268.b ENSGT00440000037417.B.a Clown anemonefish MODERN SPECIES 1827 adsl (ENSAOCG00000012212) ENSAOCG00000012234 ENSAOCG00000012243 ENSAOCG00000012258 mief1 (ENSAOCG00000012288) ENSAOCG00000012324 ##22 ENSAOCG00000012360 mettl22 (ENSAOCG00000012381) abat (ENSAOCG00000012459) ENSAOCG00000012481 prmt1 (ENSAOCG00000012529) AP2A1 (ENSAOCG00000012704) ENSAOCG00000012737 rras (ENSAOCG00000012766) prrg2 (ENSAOCG00000012788) PRR12 (ENSAOCG00000002335) zgc:113019 (ENSAOCG00000012851) ENSAOCG00000012875 ENSAOCG00000012885 MED9 (ENSAOCG00000012891) ENSAOCG00000012942 Orange clownfish MODERN SPECIES 5 ENSAPEG00000003065 ENSAPEG00000003031 zgc:113019 (ENSAPEG00000003004) SOX8 (ENSAPEG00000002982) ENSAPEG00000002969 ENSAPEG00000002944 RAB26 (ENSAPEG00000002898) ENSAPEG00000002888 ENSAPEG00000002877 ENSAPEG00000002864 adsl (ENSAPEG00000002784) ENSAPEG00000002765 ENSAPEG00000002739 ENSAPEG00000002724 mief1 (ENSAPEG00000002694) ENSAPEG00000002667 ##22 ENSAPEG00000002632 mettl22 (ENSAPEG00000002598) abat (ENSAPEG00000002538) ENSAPEG00000002521 ENSAPEG00000002499 ENSAPEG00000002473 prmt1 (ENSAPEG00000002435) AP2A1 (ENSAPEG00000002306) ENSAPEG00000002290 rras (ENSAPEG00000002251) prrg2 (ENSAPEG00000002238) PRR12 (ENSAPEG00000002226) fbxl16 (ENSAPEG00000002190) ENSAPEG00000002181 ENSAPEG00000002136 Spiny chromis MODERN SPECIES 1291 adsl (ENSAPOG00000007080) ENSAPOG00000007041 atf4b (ENSAPOG00000007025) ENSAPOG00000007012 mief1 (ENSAPOG00000006992) ENSAPOG00000006956 ##22 ENSAPOG00000006936 mettl22 (ENSAPOG00000006908) Bicolor damselfish MODERN SPECIES 555 fbxl16 (ENSSPAG00000013185) ENSSPAG00000013216 ENSSPAG00000013233 ENSSPAG00000013259 ENSSPAG00000013286 ENSSPAG00000013297 ENSSPAG00000013313 adsl (ENSSPAG00000013331) ENSSPAG00000013388 atf4b (ENSSPAG00000013410) ENSSPAG00000013419 mief1 (ENSSPAG00000013430) ENSSPAG00000013462 ##22 ENSSPAG00000013485 ##19 ENSSPAG00000013503 Cichlidae ANCESTRAL SPECIES 19 ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Pseudocrenilabrinae ANCESTRAL SPECIES 1 ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C.m.b ENSGT00950000183122.C.m.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Pseudocrenilabrinae_A ANCESTRAL SPECIES 27 ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C.m.b ENSGT00950000183122.C.m.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Haplochromini ANCESTRAL SPECIES 54 ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C.m.b ENSGT00950000183122.C.m.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789.n ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000165470.d ENSGT00390000004541.j ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b Burton s mouthbrooder MODERN SPECIES 753 ENSHBUG00000014519 atf4b (ENSHBUG00000014511) ENSHBUG00000014502 ENSHBUG00000014491 mief1 (ENSHBUG00000014430) ENSHBUG00000014407 mpst (ENSHBUG00000014402) ENSHBUG00000014398 ##22 il2rb (ENSHBUG00000014372) ##19 ENSHBUG00000014308 chst12a (ENSHBUG00000014302) CARD11 (ENSHBUG00000014273) ap5z1 (ENSHBUG00000014221) mmd2a (ENSHBUG00000014183) wipi2 (ENSHBUG00000014150) ENSHBUG00000014076 smurf1 (ENSHBUG00000013857) RNF216 (ENSHBUG00000013829) FSCN1 (ENSHBUG00000013818) ENSHBUG00000013796 ENSHBUG00000013766 ENSHBUG00000013755 slc29a4a (ENSHBUG00000000406) Haplochromini_A ANCESTRAL SPECIES 37 ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C.m.b ENSGT00950000183122.C.m.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789.n ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000165470.d ENSGT00390000004541.j ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b Haplochromini_B ANCESTRAL SPECIES 41 ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C.m.b.a ENSGT00950000183122.C.m.b.b ENSGT00940000179111.a ENSGT00950000183122.C.m.a.a.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789.n ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Zebra mbuna MODERN SPECIES 1107 ENSMZEG00005006453 tmem150b (ENSMZEG00005006469) adsl (ENSMZEG00005006493) adsl (ENSMZEG00005006522) adsl (ENSMZEG00005006556) adsl (ENSMZEG00005006589) ENSMZEG00005006623 adsl (ENSMZEG00005006647) ENSMZEG00005006816 atf4b (ENSMZEG00005006842) ENSMZEG00005006854 ENSMZEG00005006869 mief1 (ENSMZEG00005006902) ENSMZEG00005006924 mpst (ENSMZEG00005006933) ENSMZEG00005006940 ##22 il2rb (ENSMZEG00005006969) ##19 ENSMZEG00005007014 chst12a (ENSMZEG00005007022) CARD11 (ENSMZEG00005007053) ap5z1 (ENSMZEG00005007127) mmd2a (ENSMZEG00005007185) wipi2 (ENSMZEG00005007214) ENSMZEG00005007272 ENSMZEG00005007290 smurf1 (ENSMZEG00005007314) RNF216 (ENSMZEG00005007337) FSCN1 (ENSMZEG00005007362) ENSMZEG00005007397 TNRC18 (ENSMZEG00005007439) slc29a4a (ENSMZEG00005007481) Eastern happy MODERN SPECIES 16 ENSACLG00000011630 adsl (ENSACLG00000011596) ENSACLG00000011592 adsl (ENSACLG00000011567) ENSACLG00000011560 ENSACLG00000011548 ENSACLG00000011545 atf4b (ENSACLG00000011542) ENSACLG00000011537 ENSACLG00000011532 mief1 (ENSACLG00000011513) ENSACLG00000011509 ENSACLG00000011507 ENSACLG00000011503 mpst (ENSACLG00000011501) ENSACLG00000011495 ##22 ENSACLG00000011466 ##19 ENSACLG00000011462 chst12a (ENSACLG00000011184) CARD11 (ENSACLG00000011082) ap5z1 (ENSACLG00000011021) MMD2 (ENSACLG00000010994) wipi2 (ENSACLG00000010922) smurf1 (ENSACLG00000010783) RNF216 (ENSACLG00000010729) FSCN1 (ENSACLG00000010718) ENSACLG00000010698 ENSACLG00000010670 ENSACLG00000010643 slc29a4a (ENSACLG00000010394) atp5mf (ENSACLG00000010386) P. nyererei MODERN SPECIES 427 ENSPNYG00000017987 atf4b (ENSPNYG00000017995) ENSPNYG00000017999 ENSPNYG00000018005 mief1 (ENSPNYG00000018019) ENSPNYG00000018038 mpst (ENSPNYG00000018047) ube2ib (ENSPNYG00000018054) ##22 il2rb (ENSPNYG00000018082) ##19 ENSPNYG00000018136 chst12a (ENSPNYG00000018150) CARD11 (ENSPNYG00000018165) ap5z1 (ENSPNYG00000018222) mmd2a (ENSPNYG00000018238) wipi2 (ENSPNYG00000018273) ENSPNYG00000018318 smurf1 (ENSPNYG00000018376) ENSPNYG00000018397 FSCN1 (ENSPNYG00000018408) ENSPNYG00000018427 ENSPNYG00000018455 slc29a4a (ENSPNYG00000018510) atp5mf (ENSPNYG00000018539) Nile tilapia MODERN SPECIES 16 adsl (ENSONIG00000008560) ENSONIG00000038907 adsl (ENSONIG00000036192) adsl (ENSONIG00000008556) ENSONIG00000027910 ENSONIG00000008553 ENSONIG00000029635 atf4b (ENSONIG00000034760) ENSONIG00000008550 ENSONIG00000008542 mief1 (ENSONIG00000008541) ENSONIG00000042044 ENSONIG00000031382 ENSONIG00000043232 mpst (ENSONIG00000008540) ENSONIG00000030166 ##22 ENSONIG00000008536 ##19 ENSONIG00000008535 chst12a (ENSONIG00000028097) CARD11 (ENSONIG00000008528) ap5z1 (ENSONIG00000008527) MMD2 (ENSONIG00000040581) wipi2 (ENSONIG00000008520) ENSONIG00000040231 smurf1 (ENSONIG00000008515) FSCN1 (ENSONIG00000008509) ENSONIG00000008502 slc29a4a (ENSONIG00000008500) atp5mf (ENSONIG00000008498) cpsf4 (ENSONIG00000039547) shmt1 (ENSONIG00000008491) Midas cichlid MODERN SPECIES 413 atf4b (ENSACIG00000008233) ENSACIG00000008245 ENSACIG00000008260 mief1 (ENSACIG00000008280) ENSACIG00000008291 ENSACIG00000008294 mpst (ENSACIG00000008307) ENSACIG00000008325 ##22 ENSACIG00000008341 ENSACIG00000008365 chst12a (ENSACIG00000008378) CARD11 (ENSACIG00000008397) ap5z1 (ENSACIG00000008455) mmd2a (ENSACIG00000008496) wipi2 (ENSACIG00000008526) ENSACIG00000008555 smurf1 (ENSACIG00000008901) RNF216 (ENSACIG00000008944) FSCN1 (ENSACIG00000008970) ENSACIG00000008980 TNRC18 (ENSACIG00000008998) slc29a4a (ENSACIG00000009092) atp5mf (ENSACIG00000009170) Atherinomorphae ANCESTRAL SPECIES 6 ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Oryzias ANCESTRAL SPECIES ENSGT00950000182951.A.a.b.b ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b.sb ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.a.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Oryzias_b ANCESTRAL SPECIES 30 ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a.f ENSGT00510000046773.a.b.c.a.e ENSGT00550000075088.a.b ##22 ENSGT00940000177422 ENSGT00940000160396 ENSGT00940000156614.b.sb ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.a.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Indian medaka MODERN SPECIES 9 ENSOMEG00000022407 ENSOMEG00000022463 tmem150b (ENSOMEG00000022485) tmem150b (ENSOMEG00000000594) adsl (ENSOMEG00000022529) ENSOMEG00000022547 atf4b (ENSOMEG00000022555) ENSOMEG00000004437 ENSOMEG00000004477 ENSOMEG00000004495 mief1 (ENSOMEG00000004506) ENSOMEG00000004519 mpst (ENSOMEG00000004526) ENSOMEG00000004607 mpst (ENSOMEG00000004645) ENSOMEG00000004671 ##22 ENSOMEG00000004707 C1QTNF6 (ENSOMEG00000004726) chst12a (ENSOMEG00000004762) CARD11 (ENSOMEG00000004885) ap5z1 (ENSOMEG00000001000) mmd2a (ENSOMEG00000004957) wipi2 (ENSOMEG00000004986) smurf1 (ENSOMEG00000005021) RNF216 (ENSOMEG00000005042) FSCN1 (ENSOMEG00000005059) ACTB (ENSOMEG00000000111) TNRC18 (ENSOMEG00000005103) slc29a4a (ENSOMEG00000005135) atp5mf (ENSOMEG00000005152) cpsf4 (ENSOMEG00000005176) Javanese ricefish MODERN SPECIES 22 ENSOJAG00000016361 tmem150b (ENSOJAG00000016353) ENSOJAG00000016159 atf4b (ENSOJAG00000016140) mief1 (ENSOJAG00000016119) ENSOJAG00000016098 mief1 (ENSOJAG00000016041) ENSOJAG00000015954 ENSOJAG00000015937 ENSOJAG00000015915 mief1 (ENSOJAG00000015895) ENSOJAG00000015889 ENSOJAG00000015880 mpst (ENSOJAG00000015874) mpst (ENSOJAG00000015869) ENSOJAG00000015843 ##22 ENSOJAG00000015832 C1QTNF6 (ENSOJAG00000015826) chst12a (ENSOJAG00000015821) CARD11 (ENSOJAG00000015715) ap5z1 (ENSOJAG00000015666) mmd2a (ENSOJAG00000015657) wipi2 (ENSOJAG00000015249) smurf1 (ENSOJAG00000013851) RNF216 (ENSOJAG00000013681) FSCN1 (ENSOJAG00000013632) ACTB (ENSOJAG00000013436) ENSOJAG00000013405 slc29a4a (ENSOJAG00000013395) atp5mf (ENSOJAG00000013368) cpsf4 (ENSOJAG00000013354) Oryzias_a ANCESTRAL SPECIES 20 ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00970000196672 ENSGT00950000183045.A.b ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b.sb ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.a.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Japanese Medaka HdrR MODERN SPECIES 22 ENSORLG00000013372 pvalb6 (ENSORLG00000013396) ENSORLG00000013406 ENSORLG00000013411 tmem150b (ENSORLG00000025419) adsl (ENSORLG00000027286) ENSORLG00000013414 atf4b (ENSORLG00000013424) ENSORLG00000013428 ENSORLG00000013465 mief1 (ENSORLG00000013478) ENSORLG00000022248 ENSORLG00000027830 mpst (ENSORLG00000029872) mpst (ENSORLG00000013490) ENSORLG00000013514 ##22 il2rb (ENSORLG00000013522) ##19 C1QTNF6 (ENSORLG00000010706) ENSORLG00000029259 chst12a (ENSORLG00000013533) CARD11 (ENSORLG00000013537) ap5z1 (ENSORLG00000013568) mmd2a (ENSORLG00000027433) wipi2 (ENSORLG00000013601) smurf1 (ENSORLG00000013636) RNF216 (ENSORLG00000013652) FSCN1 (ENSORLG00000013664) actb2 (ENSORLG00000013676) TNRC18 (ENSORLG00000013686) slc29a4a (ENSORLG00000013699) ENSORLG00000027893 Chinese medaka MODERN SPECIES 907 ENSOSIG00000008004 ENSOSIG00000008008 ENSOSIG00000008014 ENSOSIG00000008015 pvalb6 (ENSOSIG00000008018) ENSOSIG00000008019 ENSOSIG00000008022 tmem150b (ENSOSIG00000008024) ENSOSIG00000008222 atf4b (ENSOSIG00000008223) ENSOSIG00000008224 ENSOSIG00000008225 mief1 (ENSOSIG00000008226) ENSOSIG00000008227 ENSOSIG00000008228 ube2ib (ENSOSIG00000008229) ##22 ENSOSIG00000008230 C1QTNF6 (ENSOSIG00000008231) chst12a (ENSOSIG00000008232) CARD11 (ENSOSIG00000008236) ENSOSIG00000008285 wipi2 (ENSOSIG00000008296) smurf1 (ENSOSIG00000008452) ENSOSIG00000008771 FSCN1 (ENSOSIG00000009275) ENSOSIG00000009285 ENSOSIG00000009378 slc29a4a (ENSOSIG00000009387) atp5mf (ENSOSIG00000009393) cpsf4 (ENSOSIG00000009394) shmt1 (ENSOSIG00000009422) Cyprinodontiformes ANCESTRAL SPECIES 3 ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Aplocheiloidei ANCESTRAL SPECIES 30 ENSGT00940000166738 ENSGT00950000182951.A.a.b.b ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00940000177422 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Mangrove rivulus MODERN SPECIES 37 ENSKMAG00000016676 ENSKMAG00000016633 pvalb6 (ENSKMAG00000016614) ENSKMAG00000016589 ENSKMAG00000016560 tmem150b (ENSKMAG00000016528) adsl (ENSKMAG00000016489) ENSKMAG00000016471 atf4b (ENSKMAG00000016459) ENSKMAG00000016438 mief1 (ENSKMAG00000016398) ENSKMAG00000016377 mpst (ENSKMAG00000016365) mpst (ENSKMAG00000016347) mpst (ENSKMAG00000016335) ENSKMAG00000016317 ##22 ENSKMAG00000016305 C1QTNF6 (ENSKMAG00000016291) chst12a (ENSKMAG00000016278) CARD11 (ENSKMAG00000016241) ap5z1 (ENSKMAG00000016203) mmd2a (ENSKMAG00000016187) wipi2 (ENSKMAG00000016149) smurf1 (ENSKMAG00000016086) RNF216 (ENSKMAG00000016053) FSCN1 (ENSKMAG00000016031) ENSKMAG00000016009 TNRC18 (ENSKMAG00000015814) slc29a4a (ENSKMAG00000015698) atp5mf (ENSKMAG00000015662) cpsf4 (ENSKMAG00000015642) Turquoise killifish MODERN SPECIES 1612 CR790377.1 (ENSNFUG00015002733) ENSNFUG00015002743 pvalb6 (ENSNFUG00015002775) ENSNFUG00015002859 tmem150b (ENSNFUG00015002875) adsl (ENSNFUG00015002891) ENSNFUG00015002907 CR812472.2 (ENSNFUG00015002913) ATF4B2 (ENSNFUG00015002924) ZGC (ENSNFUG00015002927) ENSNFUG00015002937 SMCR7A (ENSNFUG00015002956) BX470254.1 (ENSNFUG00015002962) mpst (ENSNFUG00015002965) Nfu_g_1_019808 (ENSNFUG00015002970) UBE2I (ENSNFUG00015002972) ##22 ENSNFUG00015002975 ENSNFUG00015002980 C1QTNF6A (ENSNFUG00015002982) CHST12A (ENSNFUG00015002983) CARD11 (ENSNFUG00015002989) ap5z1 (ENSNFUG00015003007) ENSNFUG00015003024 MMD2 (ENSNFUG00015003032) WIPI2 (ENSNFUG00015003056) SMURF1 (ENSNFUG00015003090) RNF216 (ENSNFUG00015003175) FSCN1A (ENSNFUG00015003183) ENSNFUG00015003210 TNRC18 (ENSNFUG00015003248) slc29a4a (ENSNFUG00015003258) Cyprinodontoidei ANCESTRAL SPECIES 22 ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a.j ENSGT00510000046773.a.b.c.a.i.b ENSGT00510000046773.a.b.c.a.i.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 NAME_4 ANCESTRAL SPECIES 36 ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00510000046773.a.b.c.a.j ENSGT00510000046773.a.b.c.a.i.b ENSGT00510000046773.a.b.c.a.i.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Mummichog MODERN SPECIES 395 mpst (ENSFHEG00000010388) ENSFHEG00000010415 ##22 ENSFHEG00000010426 ##19 C1QTNF6 (ENSFHEG00000010432) chst12a (ENSFHEG00000010465) CARD11 (ENSFHEG00000010483) ap5z1 (ENSFHEG00000010508) mmd2a (ENSFHEG00000010533) wipi2 (ENSFHEG00000010574) smurf1 (ENSFHEG00000010695) RNF216 (ENSFHEG00000010758) FSCN1 (ENSFHEG00000010780) ENSFHEG00000010793 ENSFHEG00000010803 slc29a4a (ENSFHEG00000010836) atp5mf (ENSFHEG00000010853) cpsf4 (ENSFHEG00000010880) Sheepshead minnow MODERN SPECIES 287 adsl (ENSCVAG00000003336) ENSCVAG00000003340 atf4b (ENSCVAG00000003344) ENSCVAG00000003347 ENSCVAG00000003354 mief1 (ENSCVAG00000003368) ENSCVAG00000003376 ENSCVAG00000003385 mpst (ENSCVAG00000003388) ENSCVAG00000003396 ENSCVAG00000003409 ENSCVAG00000003417 ENSCVAG00000003420 ENSCVAG00000003433 mpst (ENSCVAG00000003437) ENSCVAG00000003452 ##22 ENSCVAG00000003463 ##19 C1QTNF6 (ENSCVAG00000003468) chst12a (ENSCVAG00000003482) ENSCVAG00000003545 ap5z1 (ENSCVAG00000000108) mmd2a (ENSCVAG00000003594) wipi2 (ENSCVAG00000003619) smurf1 (ENSCVAG00000003665) RNF216 (ENSCVAG00000003675) FSCN1 (ENSCVAG00000003683) ENSCVAG00000003692 ENSCVAG00000003701 TNRC18 (ENSCVAG00000003741) Poeciliinae ANCESTRAL SPECIES 1 ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a.j ENSGT00510000046773.a.b.c.a.i.b ENSGT00510000046773.a.b.c.a.i.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Poecilia ANCESTRAL SPECIES 18 ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a.j ENSGT00510000046773.a.b.c.a.i.b ENSGT00510000046773.a.b.c.a.i.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 NAME_6 ANCESTRAL SPECIES 63 ENSGT00940000166738 ENSGT00950000182951.A.a.b.b ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00510000046773.a.b.c.a.j ENSGT00510000046773.a.b.c.a.i.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 4046 ENSPLAG00000004465 ##22 Sailfin molly MODERN SPECIES 3670 ENSPLAG00000009491 ENSPLAG00000009526 ##22 Amazon molly MODERN SPECIES 432 ENSPFOG00000006241 ENSPFOG00000006061 ENSPFOG00000006005 ENSPFOG00000005924 pvalb6 (ENSPFOG00000005873) ENSPFOG00000005808 adsl (ENSPFOG00000005498) ENSPFOG00000005467 atf4b (ENSPFOG00000005452) ENSPFOG00000005447 ENSPFOG00000005248 mief1 (ENSPFOG00000005190) ENSPFOG00000005178 mpst (ENSPFOG00000005123) mpst (ENSPFOG00000005120) ENSPFOG00000005112 ##22 ENSPFOG00000005082 ##19 ENSPFOG00000005049 chst12a (ENSPFOG00000004999) CARD11 (ENSPFOG00000004641) ap5z1 (ENSPFOG00000004201) MMD2 (ENSPFOG00000004107) Guppy MODERN SPECIES 460 ENSPREG00000018912 ENSPREG00000018904 ENSPREG00000018893 GRIN2A (ENSPREG00000018839) ENSPREG00000018806 adsl (ENSPREG00000018777) ENSPREG00000018760 atf4b (ENSPREG00000018746) ENSPREG00000018711 mief1 (ENSPREG00000018688) ENSPREG00000018679 ENSPREG00000018669 mpst (ENSPREG00000018653) mpst (ENSPREG00000018638) mpst (ENSPREG00000018626) ENSPREG00000018610 ##22 ENSPREG00000018591 ##19 ENSPREG00000018579 chst12a (ENSPREG00000018573) ENSPREG00000018562 ENSPREG00000018546 ap5z1 (ENSPREG00000018514) MMD2 (ENSPREG00000018489) wipi2 (ENSPREG00000018468) smurf1 (ENSPREG00000018426) ENSPREG00000018368 FSCN1 (ENSPREG00000018339) actb (ENSPREG00000018292) TNRC18 (ENSPREG00000018258) slc29a4a (ENSPREG00000018228) atp5mf (ENSPREG00000018180) Platyfish MODERN SPECIES 7 ENSXMAG00000023862 ENSXMAG00000001247 ENSXMAG00000001239 ENSXMAG00000026807 pvalb6 (ENSXMAG00000022337) ENSXMAG00000001207 ENSXMAG00000001200 adsl (ENSXMAG00000002657) ENSXMAG00000022387 atf4b (ENSXMAG00000002653) ENSXMAG00000023763 ENSXMAG00000029235 mief1 (ENSXMAG00000001151) ENSXMAG00000026576 mpst (ENSXMAG00000001146) ENSXMAG00000001134 ##22 il2rb (ENSXMAG00000001127) ##19 ENSXMAG00000001125 chst12a (ENSXMAG00000026379) CARD11 (ENSXMAG00000001085) ap5z1 (ENSXMAG00000001068) MMD2 (ENSXMAG00000028136) wipi2 (ENSXMAG00000001048) smurf1 (ENSXMAG00000001013) ENSXMAG00000024191 RNF216 (ENSXMAG00000001006) FSCN1 (ENSXMAG00000000999) ENSXMAG00000000982 TNRC18 (ENSXMAG00000000969) slc29a4a (ENSXMAG00000025766) cpsf4 (ENSXMAG00000024670) Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.d ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Eupercaria ANCESTRAL SPECIES 3 ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00970000196672 ENSGT00990000209944 ENSGT00510000046773.a.b.d ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000160705.C.b ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 Tetraodontidae ANCESTRAL SPECIES 41 ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT00950000183122.C ENSGT00940000162556.D.a.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000160179 ENSGT00390000013127.a ENSGT00740000115744 ENSGT00510000046773.a.b.d ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.a.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 ENSGT00390000002762.a.b ENSGT00390000018509.a ENSGT00390000014300 Fugu MODERN SPECIES 17 ENSTRUG00000000762 ENSTRUG00000027569 pvalb6 (ENSTRUG00000022018) ENSTRUG00000000895 ENSTRUG00000000915 adsl (ENSTRUG00000001024) ENSTRUG00000026084 ENSTRUG00000001234 atf4b (ENSTRUG00000021873) ENSTRUG00000030038 napsa (ENSTRUG00000001310) mief1 (ENSTRUG00000021806) ENSTRUG00000023803 TST (ENSTRUG00000001660) mpst (ENSTRUG00000001668) ENSTRUG00000025136 ##22 ENSTRUG00000021244 ENSTRUG00000031320 chst12a (ENSTRUG00000025406) ENSTRUG00000002024 ap5z1 (ENSTRUG00000003903) mmd2a (ENSTRUG00000004208) wipi2 (ENSTRUG00000004292) smurf1 (ENSTRUG00000004668) FSCN1 (ENSTRUG00000005218) ACTB (ENSTRUG00000005447) TNRC18 (ENSTRUG00000005638) slc29a4a (ENSTRUG00000005833) atp5mf (ENSTRUG00000003441) cpsf4 (ENSTRUG00000030405) shmt1 (ENSTRUG00000003948) Tetraodon MODERN SPECIES 26 ENSTNIG00000011502 ENSTNIG00000011501 ENSTNIG00000011500 pvalb6 (ENSTNIG00000011499) ENSTNIG00000001803 PDGFB (ENSTNIG00000011498) adsl (ENSTNIG00000011497) ENSTNIG00000011496 atf4b (ENSTNIG00000011495) napsa (ENSTNIG00000011494) mief1 (ENSTNIG00000011493) ENSTNIG00000011492 ENSTNIG00000006419 TST (ENSTNIG00000002305) mpst (ENSTNIG00000006420) ube2ib (ENSTNIG00000006421) ##22 ENSTNIG00000001793 ##19 ENSTNIG00000006422 chst12a (ENSTNIG00000006423) ENSTNIG00000006424 ENSTNIG00000006425 wipi2 (ENSTNIG00000004327) SMURF1 (ENSTNIG00000014247) FSCN1 (ENSTNIG00000014246) ENSTNIG00000007002 ENSTNIG00000007001 ENSTNIG00000003695 slc29a4a (ENSTNIG00000003694) atp5mf (ENSTNIG00000006264) atp5mf (ENSTNIG00000003693) cpsf4 (ENSTNIG00000006265) Eupecaria_A ANCESTRAL SPECIES 5 ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT01040000241311 ENSGT00940000167870 ENSGT00940000162556.D.a.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00970000196672 ENSGT00990000209944 ENSGT00510000046773.a.b.d ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Ballan wrasse MODERN SPECIES 394 ENSLBEG00000011205 ENSLBEG00000011177 ENSLBEG00000011113 pvalb6 (ENSLBEG00000011072) ENSLBEG00000011033 ENSLBEG00000011001 adsl (ENSLBEG00000010944) ENSLBEG00000010913 atf4b (ENSLBEG00000010900) ENSLBEG00000010813 ENSLBEG00000010715 mief1 (ENSLBEG00000010674) ENSLBEG00000010639 TST (ENSLBEG00000010607) mpst (ENSLBEG00000010592) ube2ib (ENSLBEG00000010563) ##22 ENSLBEG00000010526 ENSLBEG00000010483 chst12a (ENSLBEG00000010386) CARD11 (ENSLBEG00000010287) ap5z1 (ENSLBEG00000010211) mmd2a (ENSLBEG00000010108) ENSLBEG00000010076 wipi2 (ENSLBEG00000010024) smurf1 (ENSLBEG00000009908) ENSLBEG00000009850 FSCN1 (ENSLBEG00000009785) ENSLBEG00000009731 ENSLBEG00000009689 Eupecaria_B ANCESTRAL SPECIES ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT01040000241311 ENSGT00940000167870 ENSGT00940000162556.D.a.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00970000196672 ENSGT00990000209944 ENSGT00510000046773.a.b.d ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Eupecaria_C ANCESTRAL SPECIES 17 ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00970000196672 ENSGT00990000209944 ENSGT00510000046773.a.b.d ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Gilthead seabream MODERN SPECIES 15 ENSSAUG00010016503 ENSSAUG00010016502 pvalb6 (ENSSAUG00010016499) ENSSAUG00010016497 ENSSAUG00010016496 tmem150b (ENSSAUG00010016495) adsl (ENSSAUG00010016361) ENSSAUG00010016355 atf4b (ENSSAUG00010016353) ENSSAUG00010016351 ENSSAUG00010016344 mief1 (ENSSAUG00010016343) ENSSAUG00010016342 ENSSAUG00010016340 mpst (ENSSAUG00010016339) ENSSAUG00010016334 ##22 ENSSAUG00010016333 ##19 ENSSAUG00010016332 chst12a (ENSSAUG00010016330) ENSSAUG00010016310 ap5z1 (ENSSAUG00010016205) mmd2a (ENSSAUG00010016193) wipi2 (ENSSAUG00010017739) ENSSAUG00010017732 smurf1 (ENSSAUG00010015946) RNF216 (ENSSAUG00010015458) FSCN1 (ENSSAUG00010015448) ENSSAUG00010015428 TNRC18 (ENSSAUG00010015422) slc29a4a (ENSSAUG00010015410) atp5mf (ENSSAUG00010015404) Eupercaria_incertae_sedis ANCESTRAL SPECIES 35 ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00970000196672 ENSGT00990000209944 ENSGT00510000046773.a.b.d ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 European seabass MODERN SPECIES 21 ENSDLAG00005033261 pvalb6 (ENSDLAG00005004622) ENSDLAG00005004644 ENSDLAG00005004694 tmem150b (ENSDLAG00005004733) adsl (ENSDLAG00005031872) ENSDLAG00005032142 atf4b (ENSDLAG00005026933) ENSDLAG00005004784 ENSDLAG00005004808 mief1 (ENSDLAG00005004893) ENSDLAG00005029048 ENSDLAG00005028464 ENSDLAG00005004924 mpst (ENSDLAG00005004928) ENSDLAG00005004936 ##22 il2rb (ENSDLAG00005031516) ##19 ENSDLAG00005005000 ENSDLAG00005005025 ap5z1 (ENSDLAG00005005205) MMD2 (ENSDLAG00005033203) wipi2 (ENSDLAG00005005248) ENSDLAG00005005438 smurf1 (ENSDLAG00005005887) RNF216 (ENSDLAG00005006912) FSCN1 (ENSDLAG00005007046) ENSDLAG00005028561 TNRC18 (ENSDLAG00005007088) slc29a4a (ENSDLAG00005007426) ENSDLAG00005007485 cpsf4 (ENSDLAG00005030914) Large yellow croaker MODERN SPECIES 483 ENSLCRG00005007443 pvalb6 (ENSLCRG00005007448) ENSLCRG00005007450 ENSLCRG00005007455 tmem150b (ENSLCRG00005007457) adsl (ENSLCRG00005007463) ENSLCRG00005008447 atf4b (ENSLCRG00005008448) ENSLCRG00005008450 ENSLCRG00005008453 mief1 (ENSLCRG00005008458) ENSLCRG00005008459 ENSLCRG00005008461 TST (ENSLCRG00005008462) mpst (ENSLCRG00005008463) ENSLCRG00005008466 ##22 il2rb (ENSLCRG00005008470) ##19 C1QTNF6 (ENSLCRG00005008472) chst12a (ENSLCRG00005008473) CARD11 (ENSLCRG00005008474) ap5z1 (ENSLCRG00005008483) mmd2a (ENSLCRG00005008949) wipi2 (ENSLCRG00005008952) ENSLCRG00005008973 smurf1 (ENSLCRG00005008991) RNF216 (ENSLCRG00005009608) FSCN1 (ENSLCRG00005009652) ENSLCRG00005009660 TNRC18 (ENSLCRG00005009693) slc29a4a (ENSLCRG00005009699) atp5mf (ENSLCRG00005009727) Perciformes ANCESTRAL SPECIES 1 ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00990000209944 ENSGT00510000046773.a.b.d ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000160705.C.b ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099.d ENSGT00950000182898.a.b ENSGT00940000165557 Cottioidei ANCESTRAL SPECIES 1 ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000166816 ENSGT00940000167870 ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00990000209944 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099.d ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Stickleback MODERN SPECIES 10 pvalb6 (ENSGACG00000008329) ENSGACG00000008326 ENSGACG00000008313 tmem150b (ENSGACG00000008299) adsl (ENSGACG00000008181) ENSGACG00000008177 ENSGACG00000008175 ENSGACG00000008090 mief1 (ENSGACG00000008071) ENSGACG00000008069 ENSGACG00000008064 ENSGACG00000008059 ENSGACG00000008055 ENSGACG00000008053 mpst (ENSGACG00000008039) ENSGACG00000008012 ##22 il2rb (ENSGACG00000008005) ##19 ENSGACG00000008001 chst12a (ENSGACG00000007992) CARD11 (ENSGACG00000007978) ap5z1 (ENSGACG00000007962) mmd2a (ENSGACG00000007947) wipi2 (ENSGACG00000007931) ENSGACG00000007926 smurf1 (ENSGACG00000007912) ENSGACG00000007911 ENSGACG00000007906 FSCN1 (ENSGACG00000007892) ENSGACG00000007836 ENSGACG00000007822 ENSGACG00000007811 Lumpfish MODERN SPECIES 23 ENSCLMG00005012627 pvalb6 (ENSCLMG00005012626) ENSCLMG00005012625 ENSCLMG00005012624 tmem150b (ENSCLMG00005012621) adsl (ENSCLMG00005012383) ENSCLMG00005012374 ENSCLMG00005012373 ENSCLMG00005012372 ENSCLMG00005012360 ENSCLMG00005012359 ENSCLMG00005012357 ENSCLMG00005012356 ENSCLMG00005012355 mpst (ENSCLMG00005012354) ube2ib (ENSCLMG00005012352) ##22 il2rb (ENSCLMG00005012351) ##19 ENSCLMG00005012350 chst12a (ENSCLMG00005012349) ENSCLMG00005012297 ap5z1 (ENSCLMG00005012231) MMD2 (ENSCLMG00005012147) wipi2 (ENSCLMG00005012140) smurf1 (ENSCLMG00005010392) RNF216 (ENSCLMG00005010369) FSCN1 (ENSCLMG00005010366) ENSCLMG00005010364 ENSCLMG00005010361 slc29a4a (ENSCLMG00005010359) atp5mf (ENSCLMG00005010357) cpsf4 (ENSCLMG00005010356) Perciformes_a ANCESTRAL SPECIES 1 ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00970000196672 ENSGT00940000178559 ENSGT00990000209944 ENSGT00950000183045.A.b ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000160705.C.b ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099.d ENSGT00950000182898.a.b ENSGT00940000165557 Channel bull blenny MODERN SPECIES 22 ENSCGOG00000001540 pvalb6 (ENSCGOG00000001542) ENSCGOG00000001543 ENSCGOG00000001545 tmem150b (ENSCGOG00000001547) adsl (ENSCGOG00000001555) ENSCGOG00000001727 ENSCGOG00000001736 ENSCGOG00000001738 ENSCGOG00000001750 mief1 (ENSCGOG00000001788) ENSCGOG00000001802 ENSCGOG00000001803 TST (ENSCGOG00000001809) mpst (ENSCGOG00000001816) ube2ib (ENSCGOG00000001819) ##22 il2rb (ENSCGOG00000001900) ##19 ENSCGOG00000001903 chst12a (ENSCGOG00000001904) CARD11 (ENSCGOG00000001917) ap5z1 (ENSCGOG00000002086) MMD2 (ENSCGOG00000002155) wipi2 (ENSCGOG00000002192) ENSCGOG00000002827 smurf1 (ENSCGOG00000002905) ENSCGOG00000003967 FSCN1 (ENSCGOG00000004005) actb2 (ENSCGOG00000004016) ENSCGOG00000004726 slc29a4a (ENSCGOG00000004740) cpsf4 (ENSCGOG00000004795) Pike perch MODERN SPECIES 38 pvalb6 (ENSSLUG00000008231) ENSSLUG00000008214 ENSSLUG00000008203 tmem150b (ENSSLUG00000008199) adsl (ENSSLUG00000008028) ENSSLUG00000007992 ENSSLUG00000007986 atf4b (ENSSLUG00000007978) ENSSLUG00000007972 ENSSLUG00000007961 mief1 (ENSSLUG00000007958) ENSSLUG00000007951 ENSSLUG00000007945 ENSSLUG00000007941 mpst (ENSSLUG00000007940) ube2ib (ENSSLUG00000007925) ##22 il2rb (ENSSLUG00000007917) ##19 ENSSLUG00000007912 chst12a (ENSSLUG00000007909) CARD11 (ENSSLUG00000007480) ap5z1 (ENSSLUG00000007091) MMD2 (ENSSLUG00000007019) wipi2 (ENSSLUG00000006792) ENSSLUG00000006719 smurf1 (ENSSLUG00000004895) RNF216 (ENSSLUG00000004798) FSCN1 (ENSSLUG00000004784) ENSSLUG00000004774 ENSSLUG00000004760 slc29a4a (ENSSLUG00000004736) atp5mf (ENSSLUG00000004711) Percomorphaceae_D ANCESTRAL SPECIES 1 ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.d ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Anabantaria ANCESTRAL SPECIES 6 ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00970000196672 ENSGT00950000183045.A.b ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Zig-zag eel MODERN SPECIES 22 ENSMAMG00000005460 pvalb6 (ENSMAMG00000026163) ENSMAMG00000005485 ENSMAMG00000005518 tmem150b (ENSMAMG00000005525) adsl (ENSMAMG00000005541) ENSMAMG00000005580 ENSMAMG00000028008 atf4b (ENSMAMG00000005592) ENSMAMG00000005595 ENSMAMG00000005608 mief1 (ENSMAMG00000005636) ENSMAMG00000025452 ENSMAMG00000025261 mpst (ENSMAMG00000026004) ENSMAMG00000005676 ##22 il2rb (ENSMAMG00000005698) ##19 ENSMAMG00000005704 ENSMAMG00000025120 ENSMAMG00000005729 ap5z1 (ENSMAMG00000005791) MMD2 (ENSMAMG00000005812) wipi2 (ENSMAMG00000005834) ENSMAMG00000005888 smurf1 (ENSMAMG00000005989) RNF216 (ENSMAMG00000006051) FSCN1 (ENSMAMG00000006071) ENSMAMG00000006109 TNRC18 (ENSMAMG00000006142) slc29a4a (ENSMAMG00000006177) ENSMAMG00000006221 Anabantoidei ANCESTRAL SPECIES 7 ENSGT00950000182951.A.a.b.b ENSGT01060000248591.a.a.a.b.a ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00970000196672 ENSGT00950000183045.A.b ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Siamese fighting fish MODERN SPECIES 19 ENSBSLG00000002950 ENSBSLG00000002930 ENSBSLG00000002890 pvalb6 (ENSBSLG00000002881) ENSBSLG00000002870 ENSBSLG00000002844 tmem150b (ENSBSLG00000002746) adsl (ENSBSLG00000002496) ENSBSLG00000002447 atf4b (ENSBSLG00000002400) ENSBSLG00000002308 ENSBSLG00000002254 mief1 (ENSBSLG00000002229) ENSBSLG00000002220 mpst (ENSBSLG00000002209) ENSBSLG00000002186 ##22 il2rb (ENSBSLG00000002162) ##19 ENSBSLG00000002143 chst12a (ENSBSLG00000002130) CARD11 (ENSBSLG00000002054) ap5z1 (ENSBSLG00000002014) MMD2 (ENSBSLG00000002000) wipi2 (ENSBSLG00000001996) smurf1 (ENSBSLG00000001842) ENSBSLG00000001775 ENSBSLG00000001756 ENSBSLG00000001690 TNRC18 (ENSBSLG00000021039) slc29a4a (ENSBSLG00000020485) atp5mf (ENSBSLG00000020484) cpsf4 (ENSBSLG00000020471) Climbing perch MODERN SPECIES 21 ENSATEG00000005959 pvalb6 (ENSATEG00000005983) ENSATEG00000005999 ENSATEG00000006013 tmem150b (ENSATEG00000006059) adsl (ENSATEG00000006107) ENSATEG00000026437 atf4b (ENSATEG00000006189) ENSATEG00000006194 ENSATEG00000006200 mief1 (ENSATEG00000006239) ENSATEG00000029794 ENSATEG00000030156 ENSATEG00000025808 mpst (ENSATEG00000028103) ENSATEG00000006302 ##22 il2rb (ENSATEG00000006333) ##19 ENSATEG00000006340 ENSATEG00000006352 ENSATEG00000006382 ap5z1 (ENSATEG00000006503) MMD2 (ENSATEG00000006514) wipi2 (ENSATEG00000006552) ENSATEG00000006606 smurf1 (ENSATEG00000006799) ENSATEG00000006873 ENSATEG00000006883 ENSATEG00000006911 ENSATEG00000006938 slc29a4a (ENSATEG00000006954) ENSATEG00000028258 Carangaria ANCESTRAL SPECIES 4 ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.d ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000160705.C.b ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 Carangaria_A ANCESTRAL SPECIES 12 ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00510000046773.a.b.d ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 Seriola ANCESTRAL SPECIES 23 ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000162556.D.a.a ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT00740000115744 ENSGT00510000046773.a.b.d ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000154598 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.b.e.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 ENSGT00940000155520 ENSGT00390000002762.a.b Greater amberjack MODERN SPECIES 90 pvalb6 (ENSSDUG00000017878) ENSSDUG00000017898 ENSSDUG00000017998 ENSSDUG00000018018 tmem150b (ENSSDUG00000018039) adsl (ENSSDUG00000018054) ENSSDUG00000018093 ENSSDUG00000018096 atf4b (ENSSDUG00000018107) ENSSDUG00000018116 ENSSDUG00000018135 mief1 (ENSSDUG00000018158) ENSSDUG00000018180 ENSSDUG00000018187 mpst (ENSSDUG00000018202) ENSSDUG00000018210 ##22 il2rb (ENSSDUG00000018223) ##19 ENSSDUG00000018239 papola (ENSSDUG00000018247) chst12a (ENSSDUG00000018290) ENSSDUG00000018311 ap5z1 (ENSSDUG00000018384) mmd2a (ENSSDUG00000018411) wipi2 (ENSSDUG00000018440) ENSSDUG00000018482 smurf1 (ENSSDUG00000018578) RNF216 (ENSSDUG00000018678) FSCN1 (ENSSDUG00000018700) ENSSDUG00000018712 TNRC18 (ENSSDUG00000018737) slc29a4a (ENSSDUG00000018852) Yellowtail amberjack MODERN SPECIES 3256 ENSSLDG00000020543 pvalb6 (ENSSLDG00000020512) ENSSLDG00000020472 ENSSLDG00000020457 tmem150b (ENSSLDG00000020423) adsl (ENSSLDG00000020384) ENSSLDG00000020375 ENSSLDG00000020370 atf4b (ENSSLDG00000020359) ENSSLDG00000020356 ENSSLDG00000020337 mief1 (ENSSLDG00000020322) ENSSLDG00000020310 TST (ENSSLDG00000020283) mpst (ENSSLDG00000020278) ENSSLDG00000020261 ##22 ENSSLDG00000020153 C1QTNF6 (ENSSLDG00000020140) papola (ENSSLDG00000020094) chst12a (ENSSLDG00000020080) CARD11 (ENSSLDG00000020041) ap5z1 (ENSSLDG00000020003) mmd2a (ENSSLDG00000019987) wipi2 (ENSSLDG00000019957) ENSSLDG00000019872 smurf1 (ENSSLDG00000019820) ENSSLDG00000019779 RRP36 (ENSSLDG00000019741) Barramundi perch MODERN SPECIES 147 pvalb6 (ENSLCAG00010009056) ENSLCAG00010009064 ENSLCAG00010009072 tmem150b (ENSLCAG00010009076) adsl (ENSLCAG00010009149) ENSLCAG00010009629 atf4b (ENSLCAG00010009633) ENSLCAG00010009639 ENSLCAG00010009642 mief1 (ENSLCAG00010009647) ENSLCAG00010009654 ENSLCAG00010009656 ENSLCAG00010009663 TST (ENSLCAG00010009666) mpst (ENSLCAG00010009670) ENSLCAG00010009675 ##22 ENSLCAG00010009694 ##19 ENSLCAG00010009698 chst12a (ENSLCAG00010009699) ENSLCAG00010009702 ENSLCAG00010009712 ap5z1 (ENSLCAG00010009758) MMD2 (ENSLCAG00010009861) wipi2 (ENSLCAG00010009871) ENSLCAG00010009895 smurf1 (ENSLCAG00010010006) RNF216 (ENSLCAG00010010434) FSCN1 (ENSLCAG00010010462) ENSLCAG00010010498 TNRC18 (ENSLCAG00010010662) slc29a4a (ENSLCAG00010010671) Pleuronectoidei ANCESTRAL SPECIES 2 ENSGT01060000248591.a.a.a.b.a ENSGT00940000153560.b.b.b.g ENSGT00940000159653.g.a ENSGT00940000156569.a.a ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234789 ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000156614.b ENSGT00940000158573 ENSGT00390000017592 ENSGT00940000157972.c ENSGT00940000155537 ENSGT00940000160705.C.b ENSGT00940000158690 ENSGT00510000048032 ENSGT00950000183157.a.a.b.c ENSGT00950000182960.a.a.a.a ENSGT00940000157099 ENSGT00950000182898.a.b ENSGT00940000165557 Tongue sole MODERN SPECIES 8 bud31 (ENSCSEG00000006343) smcr8a (ENSCSEG00000006341) pdap1b (ENSCSEG00000006316) shmt1 (ENSCSEG00000006309) ENSCSEG00000006306 tmem150b (ENSCSEG00000006300) adsl (ENSCSEG00000006283) ENSCSEG00000006276 atf4b (ENSCSEG00000006272) ENSCSEG00000006270 ENSCSEG00000006264 mief1 (ENSCSEG00000006260) ENSCSEG00000006258 ENSCSEG00000006255 mpst (ENSCSEG00000006250) ENSCSEG00000006232 ##22 mpst (ENSCSEG00000006230) ENSCSEG00000006210 ##19 ENSCSEG00000006203 chst12a (ENSCSEG00000006200) CARD11 (ENSCSEG00000006194) ap5z1 (ENSCSEG00000006177) mmd2a (ENSCSEG00000006170) wipi2 (ENSCSEG00000006152) ENSCSEG00000006134 smurf1 (ENSCSEG00000006119) ENSCSEG00000019168 FSCN1 (ENSCSEG00000019160) actb (ENSCSEG00000019142) ENSCSEG00000019119 ENSCSEG00000019109 Turbot MODERN SPECIES 10 ENSSMAG00000007150 ENSSMAG00000007259 pvalb6 (ENSSMAG00000007278) ENSSMAG00000007289 ENSSMAG00000007321 tmem150b (ENSSMAG00000007357) adsl (ENSSMAG00000007394) ENSSMAG00000027690 ENSSMAG00000007451 CTSD (ENSSMAG00000007486) mief1 (ENSSMAG00000007530) ENSSMAG00000021583 ENSSMAG00000024603 mpst (ENSSMAG00000026128) mpst (ENSSMAG00000007579) ENSSMAG00000007583 ##22 il2rb (ENSSMAG00000029707) ##19 ENSSMAG00000022084 ENSSMAG00000007619 ENSSMAG00000007688 ENSSMAG00000007786 drg2 (ENSSMAG00000007806) gfer (ENSSMAG00000007843) syngr3a (ENSSMAG00000007853) znf598 (ENSSMAG00000007867) ENSSMAG00000007905 ENSSMAG00000008045 ENSSMAG00000008052 clcn7 (ENSSMAG00000008070) ENSSMAG00000008102 ENSSMAG00000008143 Cod MODERN SPECIES 23 ENSGMOG00000015047 ENSGMOG00000034152 ENSGMOG00000036645 ENSGMOG00000025716 tom1 (ENSGMOG00000037190) ENSGMOG00000009256 mcm5 (ENSGMOG00000009241) ENSGMOG00000034924 ENSGMOG00000000924 ENSGMOG00000029260 ENSGMOG00000020100 ENSGMOG00000023351 ENSGMOG00000014426 ENSGMOG00000014415 ##22 ENSGMOG00000024064 ENSGMOG00000036928 ENSGMOG00000022980 ENSGMOG00000034365 ENSGMOG00000014006 ENSGMOG00000014078 Protacanthopterygii ANCESTRAL SPECIES 5 ENSGT00940000157367.a.a ENSGT01030000234578.A.b.b.g ENSGT01030000234578.A.b.b.h ENSGT00950000183122.C ENSGT00940000166816 ENSGT00530000063801.a.b ENSGT01030000234599.a.b.d.b.b.b ENSGT00940000155733.a.b ENSGT00390000013127.a ENSGT01030000234887 ENSGT00740000115744 ENSGT00990000211443 ENSGT00950000183045.A.b ENSGT00970000196672 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b ##22 ENSGT00510000049239.a.c ##19 ENSGT00940000160396 ENSGT00940000167614 ENSGT00390000008221.b ENSGT00950000182935.B.b.c.h ENSGT00950000183184.b.b ENSGT00990000210186 ENSGT00940000160724 ENSGT00940000176123 ENSGT00940000158410.g.a.a ENSGT00950000182950.C ENSGT00530000063688.b.nb.b ENSGT00940000157746.f ENSGT00390000004038 ENSGT00530000063991.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 428 ENSGT00940000161265.e.a ENSGT01060000248591.a.a.a.b.a.c ENSGT00940000153560.b.b.b.g.a ENSGT00940000159653.g.a.c ENSGT00940000156569.a.a.a ENSGT00940000157367.a.a.e ENSGT01030000234578.A.b.b.h.b ENSGT00950000183122.C.o ENSGT01040000241311 ENSGT00940000167870 ENSGT00530000063801.a.b.c ENSGT00940000155733.a.b.e ENSGT00390000013127.a.y ENSGT01030000234887 ENSGT00740000115744.h ENSGT00550000075088.a.b.e ##22 ENSGT00510000049239.a.c.d ##19 ENSGT00940000167614.f.b ENSGT00390000008221.b.c ENSGT00950000182935.B.b.c.h.b ENSGT00950000183184.b.b.c ENSGT00940000160724.h ENSGT00940000176123.d.b ENSGT00940000158410.g.a.a.d Salmoninae_a ANCESTRAL SPECIES 122 ENSGT00950000182951.A.a.b.b ENSGT00940000161265.e.a.c ENSGT01060000248591.a.a.a.b.a.c ENSGT00940000153560.b.b.b.g.a ENSGT00940000159653.g.a.c ENSGT00940000156569.a.a.a ENSGT00940000157367.a.a.e ENSGT01030000234578.A.b.b.h.b ENSGT00950000183122.C.o ENSGT00940000166816.a ENSGT00530000063801.a.b.c ENSGT00940000155733.a.b.e ENSGT00390000013127.a.y ENSGT01030000234887 ENSGT00740000115744.h ENSGT00550000075088.a.b.e ##22 ENSGT00510000049239.a.c.d ##19 ENSGT00940000167614.f.b ENSGT00950000182935.B.b.c.h.b ENSGT00950000183184.b.b.c ENSGT00940000160724.h ENSGT00940000176123.d.b ENSGT00940000158410.g.a.a.d ENSGT00950000182950.C.i ENSGT00530000063688.b.nb.b.c ENSGT00940000156597.b.a ENSGT01030000234570.d.b.a.b.b.a.a.d ENSGT00940000159417.l ENSGT00950000182818.D.o ENSGT00390000018397.n ENSGT01000000214430.l.a.a Salmo ANCESTRAL SPECIES 96 ENSGT00940000166738.j.a.b ENSGT00940000163727.g ENSGT00950000182951.A.a.b.b ENSGT01060000248591.a.a.a.b.a.c ENSGT00940000153560.b.b.b.g.a ENSGT00940000159653.g.a.c ENSGT00940000156569.a.a.a ENSGT00940000157367.a.a.e ENSGT01030000234578.A.b.b.h.b ENSGT00950000183122.C.o ENSGT00940000166816.a ENSGT00530000063801.a.b.c ENSGT00940000155733.a.b.e ENSGT00390000013127.a.y ENSGT00740000115744.h ENSGT00550000075088.a.b.e ##22 ENSGT00510000049239.a.c.d ##19 ENSGT00940000167614.f.b ENSGT00950000182935.B.b.c.h.b ENSGT00950000183184.b.b.c ENSGT00940000160724.h ENSGT00940000176123.d.b ENSGT00940000158410.g.a.a.d ENSGT00950000182950.C.i ENSGT00530000063688.b.nb.b.c ENSGT00940000156597.b.a ENSGT01030000234570.d.b.a.b.b.a.a.d ENSGT00940000159417.l ENSGT00950000182818.D.o ENSGT00390000018397.n ENSGT01100000264143.A River trout MODERN SPECIES ENSSTUG00000005477 ENSSTUG00000005494 ENSSTUG00000005582 ENSSTUG00000005600 ENSSTUG00000005607 pvalb6 (ENSSTUG00000005614) ENSSTUG00000005643 ENSSTUG00000005656 tmem150b (ENSSTUG00000005676) adsl (ENSSTUG00000005748) ENSSTUG00000007484 atf4b (ENSSTUG00000007490) ENSSTUG00000007493 mief1 (ENSSTUG00000007516) ENSSTUG00000007522 ENSSTUG00000007529 ##22 ENSSTUG00000007556 ##19 ENSSTUG00000007568 FAM171A2 (ENSSTUG00000007575) itga2b (ENSSTUG00000007596) ENSSTUG00000007623 ENSSTUG00000007670 cdc27 (ENSSTUG00000008676) ENSSTUG00000009311 ENSSTUG00000009358 SCN4A (ENSSTUG00000009501) gh1 (ENSSTUG00000012807) rdm1 (ENSSTUG00000012821) ENSSTUG00000012833 ENSSTUG00000012842 ENSSTUG00000012870 Atlantic salmon MODERN SPECIES 25 ENSSSAG00000003343 ENSSSAG00000109776 ENSSSAG00000096095 ENSSSAG00000003269 ENSSSAG00000121865 pvalb6 (ENSSSAG00000105717) ENSSSAG00000003253 ENSSSAG00000003203 ENSSSAG00000003188 adsl (ENSSSAG00000002543) ENSSSAG00000096081 atf4b (ENSSSAG00000002422) CATD (ENSSSAG00000002280) MIEF1 (ENSSSAG00000002213) ENSSSAG00000002181 UBC9 (ENSSSAG00000002161) ##22 ENSSSAG00000002157 ##19 ENSSSAG00000050481 syngr1a (ENSSSAG00000120334) ENSSSAG00000085219 itga2b (ENSSSAG00000051488) ENSSSAG00000051438 ENSSSAG00000051432 ENSSSAG00000046916 cdc27 (ENSSSAG00000046681) ENSSSAG00000046638 ENSSSAG00000116807 myl4 (ENSSSAG00000046535) ENSSSAG00000008394 ENSSSAG00000008146 ENSSSAG00000116950 Oncorhynchus ANCESTRAL SPECIES 64 ENSGT00950000182951.A.a.b.b ENSGT00940000161265.e.a.c ENSGT01060000248591.a.a.a.b.a.c ENSGT00940000153560.b.b.b.g.a ENSGT00940000159653.g.a.c ENSGT00940000156569.a.a.a ENSGT00940000157367.a.a.e ENSGT01030000234578.A.b.b.h.b ENSGT00950000183122.C.o ENSGT00940000166816.a ENSGT00530000063801.a.b.c ENSGT00940000155733.a.b.e ENSGT00390000013127.a.y ENSGT01030000234887 ENSGT00740000115744.h ENSGT00550000075088.a.b.e ##22 ENSGT00510000049239.a.c.d ##19 ENSGT00940000167614.f.b ENSGT00950000182935.B.b.c.h.b ENSGT00950000183184.b.b.c ENSGT00940000160724.h ENSGT00940000158410.g.a.a.d ENSGT00950000182950.C.i ENSGT00530000063688.b.nb.b.c ENSGT00940000156597.b.a ENSGT01030000234570.d.b.a.b.b.a.a.d ENSGT00940000159417.l ENSGT00950000182818.D.o ENSGT00510000050089.b.e.a ENSGT00950000182858.A.b.b.g.a.i.d ENSGT00530000063991.a.b Rainbow trout MODERN SPECIES 4 ENSOMYG00000035111 ENSOMYG00000035942 ENSOMYG00000035950 ENSOMYG00000067202 ENSOMYG00000063241 pvalb6 (ENSOMYG00000035985) ENSOMYG00000036001 ENSOMYG00000056746 ENSOMYG00000036011 tmem150b (ENSOMYG00000036021) adsl (ENSOMYG00000036187) atf4b (ENSOMYG00000037537) ENSOMYG00000037556 ENSOMYG00000037568 ENSOMYG00000037574 ENSOMYG00000037609 ##22 il2rb2 (ENSOMYG00000037653) ##19 syngr1a (ENSOMYG00000049893) ENSOMYG00000037682 ENSOMYG00000038030 cdc27 (ENSOMYG00000039862) ENSOMYG00000077165 ENSOMYG00000040071 myl4 (ENSOMYG00000040097) ENSOMYG00000040302 gh2 (ENSOMYG00000040998) ENSOMYG00000074755 ENSOMYG00000041011 ENSOMYG00000070756 ENSOMYG00000041034 ENSOMYG00000023024 Oncorhynchus_a ANCESTRAL SPECIES 71 ENSGT00950000182951.A.a.b.b ENSGT00940000161265.e.a.c ENSGT01060000248591.a.a.a.b.a.c ENSGT00940000153560.b.b.b.g.a ENSGT00940000159653.g.a.c ENSGT00940000156569.a.a.a ENSGT00940000157367.a.a.e ENSGT01030000234578.A.b.b.h.b ENSGT00950000183122.C.o ENSGT00940000166816.a ENSGT00530000063801.a.b.c ENSGT00940000155733.a.b.e ENSGT00390000013127.a.y ENSGT01030000234887 ENSGT00740000115744.h ENSGT00550000075088.a.b.e ##22 ENSGT00510000049239.a.c.d ##19 ENSGT00940000167614.f.b ENSGT00950000182935.B.b.c.h.b ENSGT00950000183184.b.b.c ENSGT00940000160724.h ENSGT00940000158410.g.a.a.d ENSGT00950000182950.C.i ENSGT00530000063688.b.nb.b.c ENSGT00940000156597.b.a ENSGT01030000234570.d.b.a.b.b.a.a.d ENSGT00940000159417.l ENSGT00950000182818.D.o ENSGT01100000264143.A ENSGT00940000179141.b ENSGT00510000050089.b.e.a Chinook salmon MODERN SPECIES 19 ENSOTSG00005022477 ENSOTSG00005022479 ENSOTSG00005022485 ENSOTSG00005022694 ENSOTSG00005022695 ENSOTSG00005022696 pvalb6 (ENSOTSG00005022697) ENSOTSG00005022699 ENSOTSG00005022700 tmem150b (ENSOTSG00005022701) adsl (ENSOTSG00005022703) atf4b (ENSOTSG00005022991) ENSOTSG00005022993 mief1 (ENSOTSG00005022995) ENSOTSG00005022996 ENSOTSG00005022997 ##22 il2rb (ENSOTSG00005022999) ##19 ENSOTSG00005023003 syngr1a (ENSOTSG00005023004) FAM171A2 (ENSOTSG00005023005) itga2b (ENSOTSG00005023007) ENSOTSG00005023042 cdc27 (ENSOTSG00005027694) KANSL1 (ENSOTSG00005028793) ENSOTSG00005028800 myl4 (ENSOTSG00005028806) SCN4A (ENSOTSG00005028845) gh1 (ENSOTSG00005037836) ENSOTSG00005037839 ENSOTSG00005037841 ENSOTSG00005037842 Coho salmon MODERN SPECIES 1 DNAL4 (ENSOKIG00005037195) ENSOKIG00005037214 ENSOKIG00005037224 pvalb6 (ENSOKIG00005037232) ENSOKIG00005037267 ENSOKIG00005037287 ENSOKIG00005037301 tmem150b (ENSOKIG00005037309) adsl (ENSOKIG00005037362) ENSOKIG00005037747 atf4b (ENSOKIG00005037753) ENSOKIG00005037766 MIEF1 (ENSOKIG00005037819) ENSOKIG00005037835 ENSOKIG00005037845 ENSOKIG00005037852 ##22 il2rb (ENSOKIG00005037885) ##19 ENSOKIG00005037921 ENSOKIG00005037943 syngr1a (ENSOKIG00005037948) ENSOKIG00005001890 FAM171A2 (ENSOKIG00005001900) ENSOKIG00005001905 CRHR1 (ENSOKIG00005002011) cdc27 (ENSOKIG00005002340) KANSL1 (ENSOKIG00005002757) ENSOKIG00005002798 SCN4A (ENSOKIG00005003176) ENSOKIG00005006565 ENSOKIG00005006576 ENSOKIG00005006603 Huchen MODERN SPECIES 668 ENSHHUG00000019058 pvalb6 (ENSHHUG00000019066) ENSHHUG00000019079 ENSHHUG00000019090 ENSHHUG00000019097 tmem150b (ENSHHUG00000019105) adsl (ENSHHUG00000019133) ENSHHUG00000019448 ENSHHUG00000019456 ENSHHUG00000019492 mief1 (ENSHHUG00000019551) ENSHHUG00000019555 ENSHHUG00000019563 ##22 il2rb (ENSHHUG00000019654) ##19 ENSHHUG00000019691 MGAT3 (ENSHHUG00000019696) syngr1a (ENSHHUG00000019699) FAM171A2 (ENSHHUG00000019703) ENSHHUG00000019717 ENSHHUG00000019727 ENSHHUG00000019853 ENSHHUG00000019859 ENSHHUG00000019867 Salmoninae ANCESTRAL SPECIES 25 ENSGT00940000156569.a.a.b ENSGT00940000157367.a.a.f ENSGT01030000234578.A.b.b.g ENSGT01030000234578.A.b.b.h.a ENSGT00950000183122.C.p ENSGT00940000166816 ENSGT00530000063801.a.b.d ENSGT01030000234599.a.b.d.b.b.b ENSGT00940000155733.a.b.f ENSGT00390000013127.a.x ENSGT00740000115744.g ENSGT00990000211443 ENSGT00950000183045.A.b ENSGT00970000196672 ENSGT00510000046773.a.b.c.a ENSGT00550000075088.a.b.f ##22 ENSGT00510000049239.a.c.c ##19 ENSGT00940000167614.f.a ENSGT00940000160396 ENSGT00390000008221.b.d ENSGT00950000182935.B.b.c.h.a ENSGT00950000183184.b.b.d ENSGT00940000160724.g ENSGT00940000157015.j ENSGT00940000176123.d.a ENSGT00940000158410.g.a.a.c ENSGT00950000182950.C.j ENSGT00530000063688.b.nb.b.d ENSGT01030000234570.d.b.a.b.b.a.a.c ENSGT01090000261159 ENSGT00940000159417.m Salmoninae_a ANCESTRAL SPECIES 60 ENSGT00940000157367.a.a.f ENSGT01030000234578.A.b.b.g ENSGT01030000234578.A.b.b.h.a ENSGT00950000183122.C.p ENSGT00940000166816.b ENSGT00530000063801.a.b.d ENSGT01030000234599.a.b.d.b.b.b ENSGT00940000155733.a.b.f ENSGT00390000013127.a.x ENSGT00740000115744.g ENSGT00990000211443 ENSGT00950000183045.A.b ENSGT00970000196672 ENSGT00510000046773.a.b.c.a.v ENSGT00510000046773.a.b.c.a.u ENSGT00550000075088.a.b.f ##22 ENSGT00510000049239.a.c.c ##19 ENSGT00940000167614.f.a ENSGT00390000008221.b.d ENSGT00390000008221.b.c ENSGT00950000182935.B.b.c.h.a ENSGT00950000183184.b.b.d ENSGT00940000160724.g ENSGT00940000176123.d.a ENSGT00940000158410.g.a.a.c ENSGT00950000182950.C.j ENSGT00530000063688.b.nb.b.d ENSGT01030000234570.d.b.a.b.b.a.a.c ENSGT00940000159417.m ENSGT00950000182818.D.p ENSGT00390000018397.m Oncorhynchus ANCESTRAL SPECIES 33 ENSGT00940000156569.a.a.b ENSGT00940000157367.a.a.f ENSGT01030000234578.A.b.b.g ENSGT01030000234578.A.b.b.h.a ENSGT00950000183122.C.p ENSGT00940000166816.b ENSGT00530000063801.a.b.d ENSGT01030000234599.a.b.d.b.b.b ENSGT00940000155733.a.b.f ENSGT00390000013127.a.x ENSGT00740000115744.g ENSGT00950000183045.A.b ENSGT00970000196672 ENSGT00510000046773.a.b.c.a.v ENSGT00510000046773.a.b.c.a.u ENSGT00550000075088.a.b.f ##22 ENSGT00510000049239.a.c.c ##19 ENSGT00940000167614.f.a ENSGT00390000008221.b.d ENSGT00390000008221.b.c ENSGT00950000182935.B.b.c.h.a ENSGT00950000183184.b.b.d ENSGT00940000160724.g ENSGT00940000176123.d.a ENSGT00940000158410.g.a.a.c ENSGT00950000182950.C.j ENSGT00530000063688.b.nb.b.d ENSGT00940000155494.j ENSGT01030000234570.d.b.a.b.b.a.a.c ENSGT00940000159417.m ENSGT00950000182818.D.p Oncorhynchus_a ANCESTRAL SPECIES 49 ENSGT00940000156569.a.a.b ENSGT00940000157367.a.a.f ENSGT01030000234578.A.b.b.g ENSGT01030000234578.A.b.b.h.a ENSGT00950000183122.C.p ENSGT00940000162556.D.a ENSGT00530000063801.a.b.d ENSGT01030000234599.a.b.d.b.b.b ENSGT00940000155733.a.b.f ENSGT00390000013127.a.x ENSGT00740000115744.g ENSGT00950000183045.A.b ENSGT00970000196672 ENSGT00510000046773.a.b.c.a.v ENSGT00510000046773.a.b.c.a.u ENSGT00550000075088.a.b.f ##22 ENSGT00510000049239.a.c.c ##19 ENSGT00940000167614.f.a ENSGT00390000008221.b.d ENSGT00950000182935.B.b.c.h.a ENSGT00950000183184.b.b.d ENSGT00940000160724.g ENSGT00940000176123.d.a ENSGT00940000158410.g.a.a.c ENSGT00950000182950.C.j ENSGT00530000063688.b.nb.b.d ENSGT01030000234570.d.b.a.b.b.a.a.c ENSGT00940000159417.m ENSGT00950000182818.D.p ENSGT00390000018397.m ENSGT00990000204048.a Chinook salmon MODERN SPECIES 33 pvalb6 (ENSOTSG00005044076) ENSOTSG00005044078 ENSOTSG00005044080 ENSOTSG00005044081 tmem150b (ENSOTSG00005044085) tmem150b (ENSOTSG00005044086) adsl (ENSOTSG00005044092) ENSOTSG00005044974 atf4b (ENSOTSG00005000730) ENSOTSG00005000805 ENSOTSG00005001054 mief1 (ENSOTSG00005001064) ENSOTSG00005001070 mpst (ENSOTSG00005001076) mpst (ENSOTSG00005001096) ENSOTSG00005001108 ##22 il2rb (ENSOTSG00005001117) ##19 ENSOTSG00005001126 MGAT3 (ENSOTSG00005001132) ENSOTSG00005001137 FAM171A2 (ENSOTSG00005001143) itga2b (ENSOTSG00005001162) ENSOTSG00005001177 CRHR1 (ENSOTSG00005001219) cdc27 (ENSOTSG00005002767) ENSOTSG00005002783 ENSOTSG00005002820 myl4 (ENSOTSG00005002851) SCN4A (ENSOTSG00005003073) gh1 (ENSOTSG00005010814) rdm1 (ENSOTSG00005010816) Coho salmon MODERN SPECIES 26 pvalb6 (ENSOKIG00005009569) ENSOKIG00005009576 ENSOKIG00005009585 tmem150b (ENSOKIG00005009597) ENSOKIG00005009624 adsl (ENSOKIG00005009708) atf4b (ENSOKIG00005010768) ENSOKIG00005010780 ENSOKIG00005010797 ENSOKIG00005010811 mief1 (ENSOKIG00005010863) ENSOKIG00005010879 ENSOKIG00005010898 mpst (ENSOKIG00005010905) mpst (ENSOKIG00005010908) ENSOKIG00005010915 ##22 il2rb (ENSOKIG00005010946) ##19 ENSOKIG00005010959 MGAT3 (ENSOKIG00005010972) ENSOKIG00005010981 syngr1a (ENSOKIG00005010989) FAM171A2 (ENSOKIG00005010995) itga2b (ENSOKIG00005011009) ENSOKIG00005011041 CRHR1 (ENSOKIG00005011114) cdc27 (ENSOKIG00005011890) KANSL1 (ENSOKIG00005011929) ENSOKIG00005011972 myl4 (ENSOKIG00005012029) SCN4A (ENSOKIG00005012123) gh1 (ENSOKIG00005013511) Rainbow trout MODERN SPECIES 3 ENSOMYG00000040203 ENSOMYG00000040210 tmem150b (ENSOMYG00000040225) tmem150b (ENSOMYG00000040236) ENSOMYG00000065328 adsl (ENSOMYG00000040290) ENSOMYG00000055578 atf4b (ENSOMYG00000064242) ENSOMYG00000040402 ENSOMYG00000040413 mief1 (ENSOMYG00000040428) ENSOMYG00000040435 mpst (ENSOMYG00000040444) mpst (ENSOMYG00000073920) ENSOMYG00000061394 ENSOMYG00000040452 ##22 il2rb (ENSOMYG00000040458) ##19 ENSOMYG00000049415 ENSOMYG00000058628 ENSOMYG00000048055 ENSOMYG00000040470 syngr1a (ENSOMYG00000040478) ENSOMYG00000040495 itga2b (ENSOMYG00000040536) ENSOMYG00000070459 ENSOMYG00000040686 ENSOMYG00000067916 cdc27 (ENSOMYG00000041429) ENSOMYG00000041452 ENSOMYG00000041464 myl4 (ENSOMYG00000041500) Salmo ANCESTRAL SPECIES 28 ENSGT00940000157367.a.a.f ENSGT01030000234578.A.b.b.g.b ENSGT01030000234578.A.b.b.g.a ENSGT01030000234578.A.b.b.h.a ENSGT00950000183122.C.p ENSGT00940000166816.b ENSGT00530000063801.a.b.d ENSGT01030000234599.a.b.d.b.b.b ENSGT00940000155733.a.b.f ENSGT00390000013127.a.x ENSGT00990000211443 ENSGT00950000183045.A.b ENSGT00970000196672 ENSGT00510000046773.a.b.c.a.v ENSGT00510000046773.a.b.c.a.u ENSGT00550000075088.a.b.f ##22 ENSGT00510000049239.a.c.c ##19 ENSGT00940000167614.f.a ENSGT00390000008221.b.d ENSGT00390000008221.b.c ENSGT00950000182935.B.b.c.h.a ENSGT00950000183184.b.b.d ENSGT00940000160724.g ENSGT00940000176123.d.a ENSGT00940000158410.g.a.a.c ENSGT00950000182950.C.j ENSGT00530000063688.b.nb.b.d ENSGT01030000234570.d.b.a.b.b.a.a.c ENSGT00940000159417.m ENSGT00950000182818.D.p ENSGT00390000018397.m River trout MODERN SPECIES 25 ENSSTUG00000015091 ENSSTUG00000015096 pvalb6 (ENSSTUG00000015113) ENSSTUG00000015129 ENSSTUG00000015140 tmem150b (ENSSTUG00000015162) adsl (ENSSTUG00000015232) ENSSTUG00000015469 atf4b (ENSSTUG00000015476) ENSSTUG00000015488 ENSSTUG00000015502 mief1 (ENSSTUG00000015555) ENSSTUG00000015572 ENSSTUG00000015588 mpst (ENSSTUG00000015594) ENSSTUG00000015621 ##22 il2rb (ENSSTUG00000015644) ##19 ENSSTUG00000015662 mgat3a (ENSSTUG00000036658) MGAT3 (ENSSTUG00000036662) syngr1a (ENSSTUG00000036665) FAM171A2 (ENSSTUG00000036668) itga2b (ENSSTUG00000036682) ENSSTUG00000036798 ENSSTUG00000036868 cdc27 (ENSSTUG00000038672) KANSL1 (ENSSTUG00000038728) ENSSTUG00000038760 myl4 (ENSSTUG00000038846) SCN4A (ENSSTUG00000038914) gh1 (ENSSTUG00000040780) Atlantic salmon MODERN SPECIES 22 adsl (ENSSSAG00000048519) tmem150b (ENSSSAG00000003179) tmem150b (ENSSSAG00000048454) tmem150b (ENSSSAG00000122174) ENSSSAG00000097685 ENSSSAG00000050210 ENSSSAG00000050223 ENSSSAG00000118109 ENSSSAG00000050252 ENSSSAG00000050349 ENSSSAG00000111814 ENSSSAG00000050360 ENSSSAG00000050378 mpst (ENSSSAG00000084242) mpst (ENSSSAG00000050388) UBC9 (ENSSSAG00000050408) ##22 il2rb (ENSSSAG00000050463) ##19 c1qtnf6 (ENSSSAG00000100118) ENSSSAG00000050491 ENSSSAG00000088899 syngr1a (ENSSSAG00000097289) ENSSSAG00000050533 itga2b (ENSSSAG00000050579) ENSSSAG00000050676 ENSSSAG00000050718 ENSSSAG00000085507 cdc27 (ENSSSAG00000050808) ENSSSAG00000050847 ENSSSAG00000050874 myl4 (ENSSSAG00000101916) ENSSSAG00000100194 Huchen MODERN SPECIES 365 ENSHHUG00000023200 pvalb6 (ENSHHUG00000023206) ENSHHUG00000023208 ENSHHUG00000023212 tmem150b (ENSHHUG00000023215) tmem150b (ENSHHUG00000023216) adsl (ENSHHUG00000023219) ENSHHUG00000023338 atf4b (ENSHHUG00000023344) ENSHHUG00000023350 ENSHHUG00000023366 mief1 (ENSHHUG00000023372) ENSHHUG00000023376 mpst (ENSHHUG00000023383) mpst (ENSHHUG00000023389) ENSHHUG00000023390 ##22 il2rb (ENSHHUG00000023577) ##19 ENSHHUG00000023580 mgat3a (ENSHHUG00000023581) syngr1a (ENSHHUG00000023594) FAM171A2 (ENSHHUG00000023598) itga2b (ENSHHUG00000023613) ENSHHUG00000023641 ENSHHUG00000023674 Northern pike MODERN SPECIES 10 tmem150b (ENSELUG00000010725) tmem150b (ENSELUG00000032535) tlr22 (ENSELUG00000033008) adsl (ENSELUG00000010674) tlr22 (ENSELUG00000033694) ENSELUG00000010703 tlr22 (ENSELUG00000025821) ENSELUG00000010634 ENSELUG00000001081 atf4b (ENSELUG00000001208) ENSELUG00000010609 ENSELUG00000010599 mief1 (ENSELUG00000010577) ENSELUG00000010546 mpst (ENSELUG00000010532) ENSELUG00000010523 ##22 il2rb (ENSELUG00000010497) ##19 ENSELUG00000000377 mgat3a (ENSELUG00000010460) ENSELUG00000025393 ENSELUG00000010434 ABCC1 (ENSELUG00000000373) ENSELUG00000010316 ENSELUG00000010305 ENSELUG00000010272 smarca4a (ENSELUG00000010247) ldlra (ENSELUG00000010150) kri1 (ENSELUG00000010137) spc24 (ENSELUG00000010106) s1pr5a (ENSELUG00000010090) foxd7 (ENSELUG00000010078) Cyclostomata ANCESTRAL SPECIES ENSGT00550000075088.a.b ##22 Lamprey MODERN SPECIES 3599 ube2ib (ENSPMAG00000001711) ##22 Vertebrata ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Lamprey MODERN SPECIES 1797 ENSPMAG00000001592 ENSPMAG00000001587 nprl3 (ENSPMAG00000001581) ENSPMAG00000001568 ##22 ENSPMAG00000001565 Gnathostomata ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Elephant shark MODERN SPECIES 1784 ENSCMIG00000006964 ENSCMIG00000006981 ENSCMIG00000006983 PFN3 (ENSCMIG00000006987) srebf2 (ENSCMIG00000006989) ccdc134 (ENSCMIG00000006994) TOM1 (ENSCMIG00000007004) ENSCMIG00000007010 HMGXB4 (ENSCMIG00000007008) ankrd54 (ENSCMIG00000007015) eif3s6ip (ENSCMIG00000007033) mief1 (ENSCMIG00000007055) ATF4 (ENSCMIG00000007059) rps19bp1 (ENSCMIG00000007065) mpst (ENSCMIG00000007067) ube2ia (ENSCMIG00000007071) ##22 TMPRSS6 (ENSCMIG00000007076) ENSCMIG00000007081 #19 cyp2aa1 (ENSCMIG00000007086) ENSCMIG00000007097 ENSCMIG00000007102 ENSCMIG00000007104 ENSCMIG00000007107 ENSCMIG00000007109 ELFN2 (ENSCMIG00000007114) ENSCMIG00000007116 csnk1e (ENSCMIG00000007131) ENSCMIG00000007154 Euteleostomi ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Amniota ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Mammalia ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Theria ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Eutheria ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Pecora ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Yarkand deer MODERN SPECIES 622 ENSCHYG00000013621 ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Cod MODERN SPECIES 9 rhot2 (ENSGMOG00000001021) h1-0 (ENSGMOG00000030868) zgc:112496 (ENSGMOG00000016864) wdr24 (ENSGMOG00000016843) anks3 (ENSGMOG00000016821) zgc:112185 (ENSGMOG00000016791) ENSGMOG00000028854 ENSGMOG00000029281 ENSGMOG00000026632 ##25 ENSGMOG00000016774 gnptg (ENSGMOG00000016755) ENSGMOG00000016742 ENSGMOG00000029541 pdpk1b (ENSGMOG00000016714) #20 ENSGMOG00000016700 #21 ENSGMOG00000016688 ##22 ENSGMOG00000016657 ENSGMOG00000016630 ENSGMOG00000016582 ENSGMOG00000024264 znf668 (ENSGMOG00000028772) ENSGMOG00000027587 ENSGMOG00000003088 ENSGMOG00000003060 ENSGMOG00000022632 ENSGMOG00000003017 luc7l (ENSGMOG00000002988) ENSGMOG00000002966 cox6b1 (ENSGMOG00000002955) ENSGMOG00000002835 dcun1d3 (ENSGMOG00000029889) Otomorpha ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Clupeiformes ANCESTRAL SPECIES ENSGT00550000075088.b ##22 Denticle herring MODERN SPECIES 11 ENSDCDG00000000733 sfxn3 (ENSDCDG00000000735) glo1 (ENSDCDG00000000742) cox6b1 (ENSDCDG00000000745) ENSDCDG00000000751 luc7l (ENSDCDG00000000759) stub1 (ENSDCDG00000000769) crp2 (ENSDCDG00000000773) ENSDCDG00000000779 ENSDCDG00000000783 adka (ENSDCDG00000000803) ap3m1 (ENSDCDG00000000951) ENSDCDG00000000959 kcnc3b (ENSDCDG00000000965) cog7 (ENSDCDG00000000977) ENSDCDG00000000988 ##22 ENSDCDG00000001000 irf3 (ENSDCDG00000001005) ENSDCDG00000001013 ENSDCDG00000001030 scn4aa (ENSDCDG00000001095) ENSDCDG00000001252 ENSDCDG00000001256 rdh5 (ENSDCDG00000001260) bloc1s1 (ENSDCDG00000001264) nab2 (ENSDCDG00000001269) cnpy2 (ENSDCDG00000001274) ENSDCDG00000001279 ENSDCDG00000001282 ENSDCDG00000001289 ahcy (ENSDCDG00000001295)